 |
| Job Description | P76249 | | Confidence | 1.26% | Date | Thu Jan 5 12:21:12 GMT 2012 |
| Rank | 26 | Aligned Residues | 46 |
| % Identity | 17% | Template | d1joga_ |
| SCOP info | Four-helical up-and-down bundle
| Nucleotidyltransferase substrate binding subunit/domain
| Family 1 bi-partite nucleotidyltransferase subunit
|
| Resolution | 2.40 |
|
|   |   |
90 | . | . | . | . | . | . | . | . | . | 100 | . | . | |
. | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | |
. | . | . | 130 | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
L | G | S | K | I | L | Y | A | T | L | K | G | K | . |
N | S | E | A | K | S | D | E | P | Q | Y | G | A | I | F | K | R | A | L | I | L | S | L | T | . |
N | P | K | A | I | L | F | Y | V |
| Query Conservation |   |
|
|   |   |   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   | . |
|
|   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |   |
|
|
|   |
|   |   |   |
|
|   |
|
|
| Template Sequence |   |
L | S | L | K | X | X | K | R | Q | L | Q | Q | D | A | I | N | T | D | D | I | G | A | Y | G | F | K | D | I | L | R | E | A | L | R | F | G | L | I | G | D | X | S | K | W | V | A | Y | R |
| Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|
|
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  | T | T | S |
| S |
|  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|