BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (773 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=... 1589 0.0 UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE 900 0.0 UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa ... 893 0.0 UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actino... 855 0.0 UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Ta... 821 0.0 UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21V... 800 0.0 UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychro... 706 0.0 UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopi... 688 0.0 UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular ... 681 0.0 UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria ... 681 0.0 UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria R... 677 0.0 UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomona... 676 0.0 UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria ... 674 0.0 UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Ba... 660 0.0 UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellac... 654 0.0 UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria ... 647 0.0 UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria ... 645 0.0 UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacter... 644 0.0 UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Ba... 642 0.0 UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular ... 635 e-180 UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 2... 601 e-170 UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria R... 593 e-168 UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria R... 590 e-167 UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Ta... 589 e-166 UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacte... 579 e-163 UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria ... 575 e-162 UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia... 575 e-162 UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular ... 568 e-160 UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacter... 564 e-159 UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 555 e-156 UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2... 551 e-155 UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaero... 548 e-154 UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular o... 541 e-152 UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria... 535 e-150 UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding... 533 e-149 UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobact... 528 e-148 UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacil... 520 e-145 UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitr... 516 e-144 UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridia... 511 e-143 UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia ... 510 e-143 UniRef50_A9NHV1 Tex protein-related transcription accessory prot... 508 e-142 UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococc... 507 e-142 UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycopla... 489 e-136 UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonpro... 482 e-134 UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=de... 473 e-131 UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosiph... 445 e-123 UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosiph... 441 e-122 UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 439 e-121 UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Myco... 431 e-119 UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycopla... 422 e-116 UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 422 e-116 UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding doma... 419 e-115 UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 ... 412 e-113 UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=... 397 e-108 UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 390 e-107 UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding doma... 381 e-104 UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding doma... 373 e-101 UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding doma... 362 4e-98 UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59... 350 1e-94 UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing ... 348 5e-94 UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria R... 339 2e-91 UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7... 328 4e-88 UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS 328 4e-88 UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersini... 323 1e-86 UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 ... 323 2e-86 UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=... 317 1e-84 UniRef50_Q4DZK1 Transcription modulator/accessory protein, putat... 316 2e-84 UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun se... 315 4e-84 UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichop... 313 2e-83 UniRef50_Q4QH24 Transcription modulator/accessory protein, putat... 296 2e-78 UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain pro... 293 1e-77 UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory prote... 290 2e-76 UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larv... 271 8e-71 UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula ... 267 1e-69 UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=... 267 1e-69 UniRef50_UPI00019085B8 probable transcriptional accessory protei... 257 1e-66 UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCM... 240 1e-61 UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis... 239 3e-61 UniRef50_C5KAX6 Tex protein-relatedtranscription accessory prote... 237 1e-60 UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornu... 226 3e-57 UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorh... 216 3e-54 UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root Re... 208 8e-52 UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria R... 196 3e-48 UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Ta... 147 1e-33 UniRef50_UPI000190EA94 putative transcription accessory protein ... 145 8e-33 UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureu... 139 4e-31 UniRef50_UPI0001910907 putative transcription accessory protein ... 138 7e-31 UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=... 113 3e-23 UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putati... 113 3e-23 UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 ... 100 3e-19 UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 T... 100 3e-19 UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eu... 97 3e-18 UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bi... 96 5e-18 UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS 96 7e-18 UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Ne... 96 7e-18 UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=So... 94 1e-17 UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchi... 94 2e-17 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 93 4e-17 UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflex... 90 3e-16 UniRef50_Q0WVD2 Elongation factor Ts (Fragment) n=5 Tax=cellular... 89 5e-16 UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditi... 88 2e-15 UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopi... 87 2e-15 UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosip... 87 3e-15 UniRef50_UPI000186D180 transcription elongation factor SPT6, put... 87 3e-15 UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leo... 86 6e-15 UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Sch... 86 6e-15 UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial ... 85 1e-14 UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eu... 83 4e-14 UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia mal... 82 1e-13 UniRef50_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudona... 81 1e-13 UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornu... 80 2e-13 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 80 3e-13 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 80 3e-13 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 80 4e-13 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 78 1e-12 UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyr... 77 2e-12 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 77 3e-12 UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5... 77 3e-12 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 77 4e-12 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 76 5e-12 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 76 7e-12 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 75 7e-12 UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL 75 1e-11 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 75 1e-11 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 75 1e-11 UniRef50_A9SG12 Predicted protein n=1 Tax=Physcomitrella patens ... 75 1e-11 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 74 2e-11 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 74 2e-11 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 74 2e-11 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 74 3e-11 UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma m... 73 3e-11 UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Sa... 73 4e-11 UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichop... 73 5e-11 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 73 5e-11 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 73 6e-11 UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 72 6e-11 UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Fil... 72 7e-11 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 72 7e-11 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 72 8e-11 UniRef50_UPI0001C36465 polynucleotide phosphorylase/polyadenylas... 72 9e-11 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 72 1e-10 UniRef50_UPI00016BFB5D hypothetical protein Epulo_08978 n=1 Tax=... 72 1e-10 UniRef50_B7G261 Predicted protein n=1 Tax=Phaeodactylum tricornu... 71 1e-10 UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostri... 71 1e-10 UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula ... 71 2e-10 UniRef50_A2FJA8 S1 RNA binding domain containing protein n=1 Tax... 71 2e-10 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 71 2e-10 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 70 2e-10 UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobacu... 70 4e-10 UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflex... 70 4e-10 UniRef50_A7GUA8 RNA binding S1 domain protein n=7 Tax=Bacillales... 69 6e-10 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 69 6e-10 UniRef50_B1YKU0 RNA binding S1 domain protein n=3 Tax=Bacillales... 69 7e-10 UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O808... 69 9e-10 UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteri... 68 1e-09 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 68 1e-09 UniRef50_A0RK95 General stress protein 13 n=90 Tax=Bacillales Re... 68 2e-09 UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Sch... 68 2e-09 UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=5... 68 2e-09 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 68 2e-09 UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobac... 68 2e-09 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 67 2e-09 UniRef50_Q03SZ4 RNA binding protein (S1 domain) n=105 Tax=Firmic... 67 2e-09 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 67 2e-09 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 67 2e-09 UniRef50_Q1WSG8 S1-type RNA-binding domain n=18 Tax=Firmicutes R... 67 2e-09 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 67 2e-09 UniRef50_D1PLC1 RNA-binding protein n=1 Tax=Subdoligranulum vari... 67 2e-09 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 67 3e-09 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 67 3e-09 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 66 4e-09 UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assemb... 66 4e-09 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 66 4e-09 UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Can... 66 4e-09 UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cell... 66 5e-09 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 66 5e-09 UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=u... 66 5e-09 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 66 5e-09 UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflex... 66 6e-09 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 66 6e-09 UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus... 66 7e-09 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 65 7e-09 UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 T... 65 7e-09 UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxo... 65 8e-09 UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococ... 65 8e-09 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 65 8e-09 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 65 8e-09 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 65 9e-09 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 65 9e-09 UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Aga... 65 1e-08 UniRef50_C9KMW6 RNA-binding protein n=3 Tax=Clostridiales RepID=... 65 1e-08 UniRef50_C1N2E8 Elongation factor Ts n=2 Tax=cellular organisms ... 65 1e-08 UniRef50_C7H4V6 General stress protein 13 (Fragment) n=3 Tax=Fae... 65 1e-08 UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridiu... 64 2e-08 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 64 2e-08 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 64 2e-08 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 64 2e-08 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 64 2e-08 UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cyst... 64 2e-08 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 64 3e-08 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 64 3e-08 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 64 3e-08 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 63 4e-08 UniRef50_A8MK30 RNA binding S1 domain protein n=32 Tax=Firmicute... 63 4e-08 UniRef50_A5VCY9 Polyribonucleotide nucleotidyltransferase n=438 ... 63 4e-08 UniRef50_A5D5X0 Predicted RNA binding protein n=5 Tax=Firmicutes... 63 4e-08 UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 63 5e-08 UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnolio... 63 5e-08 UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovib... 63 5e-08 UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium ... 62 6e-08 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 62 7e-08 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 62 7e-08 UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ust... 62 7e-08 UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helic... 62 7e-08 UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1... 62 8e-08 UniRef50_C7N5E6 Polyribonucleotide nucleotidyltransferase (Polyn... 62 8e-08 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 62 8e-08 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 62 8e-08 UniRef50_B8BUB4 Predicted protein n=1 Tax=Thalassiosira pseudona... 62 8e-08 UniRef50_C9LM60 S1 RNA-binding domain protein n=1 Tax=Dialister ... 62 9e-08 UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6B... 62 9e-08 UniRef50_A4ISC1 Polyribonucleotide nucleotidyltransferase, gener... 62 1e-07 UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio ba... 62 1e-07 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 62 1e-07 UniRef50_A8RD50 Putative uncharacterized protein n=1 Tax=Eubacte... 62 1e-07 UniRef50_P80870 General stress protein 13 n=12 Tax=Bacillales Re... 62 1e-07 UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Seleno... 61 1e-07 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 61 1e-07 UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 61 1e-07 UniRef50_D2MNP2 General stress protein 13 n=1 Tax=Bulleidia extr... 61 2e-07 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 61 2e-07 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 61 2e-07 UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomyc... 61 2e-07 UniRef50_UPI0001B43B43 general stress protein 13 n=1 Tax=Listeri... 61 2e-07 UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1... 61 2e-07 UniRef50_B7GEU7 Predicted RNA binding protein (Contains ribosoma... 61 2e-07 UniRef50_B8I046 RNA binding S1 domain protein n=13 Tax=Clostridi... 61 2e-07 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 61 2e-07 UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacteral... 61 2e-07 UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccha... 60 2e-07 UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold... 60 2e-07 UniRef50_A2R624 Function: RRP5 is required for formation of both... 60 3e-07 UniRef50_Q1WUT5 Polyribonucleotide nucleotidyltransferase n=17 T... 60 3e-07 UniRef50_C4R3F9 RNA binding protein with preference for single s... 60 3e-07 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 60 3e-07 UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomono... 60 3e-07 UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostri... 60 3e-07 UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCM... 60 3e-07 UniRef50_B8C1Y5 Predicted protein n=1 Tax=Thalassiosira pseudona... 60 3e-07 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 60 4e-07 >UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=YHGF_ECOLI Length = 773 Score = 1589 bits (4115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 773/773 (100%), Positives = 773/773 (100%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL Sbjct: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE Sbjct: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV Sbjct: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN Sbjct: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR Sbjct: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH Sbjct: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 Query: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA Sbjct: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA Sbjct: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS Sbjct: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL Sbjct: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN Sbjct: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR Sbjct: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR Sbjct: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 >UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE Length = 791 Score = 900 bits (2327), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/723 (63%), Positives = 543/723 (75%), Gaps = 12/723 (1%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A EI AR QV +AV LLD+G TVPFIARYRKE TGGLDD LR LE RL YLRELEER Sbjct: 23 LATEIGARASQVASAVELLDDGATVPFIARYRKEATGGLDDGALRTLEVRLGYLRELEER 82 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R AIL+SI++QGKLT +L + I +K LEDLY PYKPKRRTR QIA EAGLEPLAD Sbjct: 83 RGAILESITQQGKLTPELQQEIATAETKQRLEDLYAPYKPKRRTRAQIAREAGLEPLADA 142 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 + +DP+ P AAQY+ + + D KAALDGAR IL ER AE+A LLA +R++LW Sbjct: 143 ILADPACDPAALAAQYLNPEASINDAKAALDGARDILAERHAENADLLADIREHLWSTGL 202 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL--SLNADPQFDE 247 L S +V GKE +GA FRD+FD +EPL T+PSHR LA+ RGR +GVL+L L AD + + Sbjct: 203 LYSKMVEGKETDGANFRDWFDFNEPLRTLPSHRILALMRGRQQGVLELRVGLEADLEAET 262 Query: 248 PPKESYCEQIIMDHLGL-----RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 P C I L L L+ P W V WTWR+K+L E+EL G +RE Sbjct: 263 P---HPCVVRIASFLKLGNGLFALDATPRARWLGEVCRWTWRVKLLTAFESELFGRLRES 319 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 AE EAI VFA NL DLL+AAPAG + +GLDPG+RTG KVAV+D TGK+V T T+YP Sbjct: 320 AEAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKVAVIDRTGKVVDTATVYPFEP 379 Query: 363 QAAKAAM--TVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 + + T+AAL +H VEL+AIGNGTASRE+E+ D+ +FP + +V+VSEAGA Sbjct: 380 RRDREGTIKTLAALAARHKVELIAIGNGTASRESEKLVGDMMARFPDLALTRVVVSEAGA 439 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSASE AA EFPDLDV+LRGAVSIARRLQDPLAELVKIDPK+IGVGQYQHDV+Q +LA Sbjct: 440 SVYSASETAALEFPDLDVTLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQRELA 499 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 R LDAVVEDCVNAVGVD+NTAS LL RV+GL ++A+NIVAWRDENG F R L KV Sbjct: 500 RSLDAVVEDCVNAVGVDVNTASAALLARVSGLNTLLAKNIVAWRDENGAFPTRDMLRKVP 559 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 R G KAFEQ AGFLRI +GDNPLDAS VHPEAYPVVERI+A + ++ ++G L+ + Sbjct: 560 RFGEKAFEQAAGFLRIPNGDNPLDASAVHPEAYPVVERIVARIKADVRHIIGQREALKGV 619 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 SDFTDE+FG+PTV DI ELEKPGRDPRPEFKTAQF +GVET+NDL PGM+LEG VTN Sbjct: 620 SPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVVTN 679 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V NFGAFVDIGVHQDGLVHIS+L+ KFV+DP VV+ G V VKVLEVD+ RKR+ALTMR Sbjct: 680 VANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTVTVKVLEVDVARKRVALTMR 739 Query: 721 LDE 723 L++ Sbjct: 740 LND 742 >UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUT9_9GAMM Length = 836 Score = 893 bits (2307), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/782 (57%), Positives = 563/782 (71%), Gaps = 47/782 (6%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + + IA E+ + QV A + LLDEG TVPFIARYRKEITGGLDDTQLR LE RL YLR Sbjct: 3 TIAQRIAEELSVQETQVQATINLLDEGATVPFIARYRKEITGGLDDTQLRTLEERLRYLR 62 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL+ERR+ IL SI EQ KLT +L AI A KT LEDLYLPYKPKRR+R + A EAGLE Sbjct: 63 ELDERREVILNSIREQNKLTPELETAIKAADIKTRLEDLYLPYKPKRRSRAKAAKEAGLE 122 Query: 125 PLADLLWSDPSHTPEVAAAQYVY------------------------------------A 148 PLA LW +P+ PE AA Y+ Sbjct: 123 PLALDLWQNPTLVPEEAATAYIKVATVESTESAEIAESTESTESTESVESTETAESAEKT 182 Query: 149 DKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY 208 KG+ + AL+GAR+ILME+FAE+A+LL ++R YLW+NA + VV GKEE+GAKF DY Sbjct: 183 KKGIETVEQALEGARHILMEKFAEEASLLEELRAYLWENAIFKAQVVEGKEEKGAKFADY 242 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE----SYCEQIIMDHLGL 264 FD+H + +PSHRALAMFRGR EG+LQLSL + + +E + +YCE I H + Sbjct: 243 FDYHGAIKRLPSHRALAMFRGRKEGILQLSLPVEGKDEEGNVQDVAPTYCEGKIAQHFSI 302 Query: 265 RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 ADSW V TWR K+ HL+ +L+ VRE +E+EAI VF NL DLL+AAPA Sbjct: 303 EDQGRSADSWLLETVRTTWRFKMRSHLDAQLLTKVRETSENEAIKVFGTNLQDLLLAAPA 362 Query: 325 GLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT--GQAAKAAMTVAALCEKHNVEL 382 GLR TMGLDPGLRTGVKVAVVD TGKLV T TIYPH Q ++ + L +H VEL Sbjct: 363 GLRVTMGLDPGLRTGVKVAVVDKTGKLVDTATIYPHAPRKQWQQSIDKLIELASQHQVEL 422 Query: 383 VAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRG 442 ++IGNGT SRET++ D+ KQ P++ K++VSEAGASVYSAS++AA EFPDLDVSLRG Sbjct: 423 MSIGNGTGSRETDKLVTDLMKQHPELGLYKLVVSEAGASVYSASKIAADEFPDLDVSLRG 482 Query: 443 AVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS 502 A+SIARRLQDPLAELVKI+PKSIGVGQYQHDV++ LAR L+AVVEDCVNAVGVD+NTAS Sbjct: 483 AISIARRLQDPLAELVKIEPKSIGVGQYQHDVNKNYLARTLEAVVEDCVNAVGVDVNTAS 542 Query: 503 VPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP 562 V LL RV+GL +A+NIV +R+E+G F NR +V R+G K+FEQ AGFLRI +G+NP Sbjct: 543 VSLLGRVSGLNAGLARNIVEFRNEHGIFLNRDTFKQVPRMGEKSFEQAAGFLRIMNGENP 602 Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL 622 LDAS+VHPEAYP+VE+I++ + + ++ L+G+ LRNL+ ++T++ FGVPT+TDI++EL Sbjct: 603 LDASSVHPEAYPLVEQIVSGSDKTVQSLIGDVEFLRNLQPENYTNDTFGVPTITDILREL 662 Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 EKPGRDPRPEFK F +G+E + DL+ M+LEG VTNVTNFGAFVD+GVH DGLVHIS+ Sbjct: 663 EKPGRDPRPEFKMPHFKEGIENIEDLEADMVLEGVVTNVTNFGAFVDVGVHHDGLVHISA 722 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 LS +V+DP VVKAGD+VKVKVLE+DL+R+R+ALTM LDE+ +R N+ P Sbjct: 723 LSRDYVKDPRAVVKAGDVVKVKVLEIDLKRQRVALTMCLDEE-----KKREHQNDVPSKK 777 Query: 743 RP 744 +P Sbjct: 778 KP 779 >UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actinomycetales RepID=C1B2S2_RHOOB Length = 807 Score = 855 bits (2209), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/735 (59%), Positives = 537/735 (73%), Gaps = 19/735 (2%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E+ R QV AAV LLD G TVPFIARYRKE+TG LDD QLR LE RL YLREL+ER Sbjct: 10 IAEELAVREGQVAAAVDLLDGGATVPFIARYRKEVTGTLDDAQLRQLEERLRYLRELDER 69 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R A+L+SI QGKL D L I +K LED+YLP+KPKRRT+ QIA EAG EP+AD Sbjct: 70 RDAVLESIDSQGKLDDQLRGQIMTADTKARLEDIYLPFKPKRRTKAQIAREAGHEPVADA 129 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 L +DPS P A Y T L+GAR IL+ERFAEDA L+ ++R+ +W Sbjct: 130 LITDPSTDP----ASY---------TAEQLEGARAILVERFAEDADLVGELRELMWTRGQ 176 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 LVS V GKE EGAKF DYF+ EP +PSHR LA+ RG E VL L+L D + P Sbjct: 177 LVSAVRKGKETEGAKFADYFEFSEPFGKLPSHRILAVLRGEKEEVLSLTLAPDTEEPVPG 236 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 + + E I G+ PAD W V W WR K+++ L + +R+ AE +A++ Sbjct: 237 EATVYEGRIAGRFGIADRGRPADRWLLDTVRWAWRTKMIVTLGIDTRMRLRQSAEKDAVD 296 Query: 310 VFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAA- 368 VFA NL DLL+AAPAG RATMGLDPG RTG KVAVVDATGK+VA +TIYPH Q A Sbjct: 297 VFATNLRDLLLAAPAGTRATMGLDPGFRTGTKVAVVDATGKVVAHETIYPHQPQNKWDAS 356 Query: 369 -MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASE 427 T+A L K+ VEL+AIGNGTASRET+ ++ + K++VSEAGASVYSAS Sbjct: 357 LATLAGLVAKYGVELIAIGNGTASRETDALASELIAKSGATNLTKIVVSEAGASVYSASA 416 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 A+ E PDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS+T LAR L AVV Sbjct: 417 YASAELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLGAVV 476 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 ED VNAVGVD+NTASVPLL+RV+G+ +A++IVA RD+NG F++R+ L V+RLGPKAF Sbjct: 477 EDAVNAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQNGPFRSRKGLKDVARLGPKAF 536 Query: 548 EQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTD 607 EQCAGFLRI +GD+PLDAS+VHPEAYPVV +I+ + +++++GN+S LR+L +DF D Sbjct: 537 EQCAGFLRILNGDDPLDASSVHPEAYPVVRKIVQTSGTGVREIIGNTSALRSLNPADFVD 596 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 ++FG+PTVTDII ELEKPGRDPRPEFKTA FA G+E ++ L+PGM LEG VTNV FGAF Sbjct: 597 DRFGLPTVTDIIGELEKPGRDPRPEFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFGAF 656 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPG- 726 VDIGVHQDGLVH+S++S+ FV+DP VVK+GD+V VKVLEVD R+RI LT+RLD++ G Sbjct: 657 VDIGVHQDGLVHVSAMSHNFVKDPRDVVKSGDVVTVKVLEVDEARQRIGLTLRLDDEVGA 716 Query: 727 ---ETNARRGGGNER 738 + + RGGG +R Sbjct: 717 GGRKNDGPRGGGAQR 731 >UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Tax=Bacteria RepID=C8RTU2_CORJE Length = 759 Score = 821 bits (2120), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/764 (56%), Positives = 550/764 (71%), Gaps = 15/764 (1%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D IIA E++ +V A + LLD G TVPFIARYRKE+TGG+DD+QLR LE RL Sbjct: 4 MTDCIASIIAHELEVDQPRVQATIDLLDGGATVPFIARYRKEVTGGMDDSQLRQLEQRLD 63 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLREL R++ ILKSI EQGKLTD+L + I A +K LEDLYLP+K RRT+ IA EA Sbjct: 64 YLRELAARKETILKSIEEQGKLTDELREKILAVDTKARLEDLYLPFKKSRRTKAAIAREA 123 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GL L + L + S P++AA Y +G AD + L GAR I++E + D L+ ++R Sbjct: 124 GLGELVEKLLAGGS--PDLAAD---YVQEGFADATSVLAGARAIVVEDISTDPDLVGEIR 178 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + +K S V+ GKEEEG K+RDYF+ EP +PSHR LA+ RG NEGVL++ N Sbjct: 179 EEYFKRGRAESAVIEGKEEEGQKYRDYFEFDEPFGDLPSHRVLALLRGENEGVLRV--NF 236 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 P D+ + + II D GL+ PAD +R V + WR K+ + ++ ++E Sbjct: 237 APGEDD----EFYQGIIADRTGLQAQGDPADKFRAECVRFGWRTKLAVSSAVDVRMRLKE 292 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +A++ A++VF++NL DLL+AAPAG RAT+G+DPG R GVK AVVD TGK++ T +YPH+ Sbjct: 293 KADEAAVSVFSKNLKDLLLAAPAGHRATLGMDPGYRNGVKCAVVDGTGKVLDTVVVYPHS 352 Query: 362 GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 GQ KA ++AL KH VEL+A+GNGTASRETE+ ++ Q V++SEAGAS Sbjct: 353 GQWDKARTILSALVNKHGVELLAVGNGTASRETEKLAKEIAGLADGTKPQTVVISEAGAS 412 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSASE+AAQEFPD+DVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV+Q LA Sbjct: 413 VYSASEVAAQEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQALLAA 472 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VVED VN+VGVD+N AS PLL RVAG+T +A+NIVA+RDENG F++R++LLKV R Sbjct: 473 GLDTVVEDAVNSVGVDVNLASAPLLNRVAGVTPTLAENIVAYRDENGAFKSRKELLKVPR 532 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LGPKAFEQ AGFLRIN +PLD S VHPEAYP+V RI+ AT + L+GNS+ L L+ Sbjct: 533 LGPKAFEQAAGFLRINGAADPLDGSAVHPEAYPLVRRIVDATGVEVVQLVGNSAVLGKLR 592 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 A DF DEKFG+PTVTD++ EL+KPGRDPRP FKTA A+G+ET+ DL+PGM+LEG VTNV Sbjct: 593 AGDFADEKFGIPTVTDVLAELDKPGRDPRPTFKTATLAEGIETIKDLKPGMVLEGTVTNV 652 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 FGAFVDIGVHQDGLVH+S++S +FV+DPH VV +G++VKV+V++VD+ R RI L++RL Sbjct: 653 AAFGAFVDIGVHQDGLVHVSAMSEQFVKDPHDVVSSGEVVKVRVVDVDVPRNRIGLSLRL 712 Query: 722 DEQPGETNARRGGGNERPQNN-RPAAKPRGREAQPAGNSAMMDA 764 ++P A G +P+ R KPR + Q + +A+ +A Sbjct: 713 QDEPKAPTAN---GKSKPKKGARRKPKPRNQAPQGSMAAALKNA 753 >UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21VK3_RHOFD Length = 807 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/765 (57%), Positives = 537/765 (70%), Gaps = 36/765 (4%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E++ + +QV AAV LLD G +VPFIARYRKE T GLDD QLR LE RL YLREL +R Sbjct: 8 IAQELRVQNKQVQAAVDLLDGGASVPFIARYRKEATDGLDDIQLRELEARLGYLRELRDR 67 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 Q ++K+I EQGKLT +L A+ A SK ELEDLYLP+K KRRT+GQ+A EAGLEPLAD Sbjct: 68 LQTVIKAIDEQGKLTPELLAALVAAASKQELEDLYLPFKLKRRTKGQLAREAGLEPLADA 127 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTK----------AALDGARYILMERFAEDAALLAK 179 L+++P P A YV A + V + + A LDG R IL ER+AE+ A++ Sbjct: 128 LFANPELVPADEAQAYVIAMRPVVEGEDKQPDFSTVPAVLDGVRDILSERWAENPAVVQD 187 Query: 180 VRDYLWKNAHLVSTVVSGKEE---EGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 +R++LW+ L S ++ GK+E + AKFRDYFD+ EP+ VPSHRALA+FRGR +L Sbjct: 188 LREWLWQEGLLKSKLMDGKDENHPDVAKFRDYFDYDEPIGRVPSHRALAVFRGRGLEILD 247 Query: 237 LSL-----NADPQFDEP----------PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSW 281 L N P P P S E I LG AD + V+W Sbjct: 248 AKLVVFEPNQAPATVAPEHAAIKTRVAPAVSLAEGRIALRLGWNHQGRAADDLIRKCVAW 307 Query: 282 TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVK 341 TWR+K+ + E +L +RE AE AI VFA NL DLL+AAPAG R +GLDPG+RTGVK Sbjct: 308 TWRVKLSLSTERDLFTRLREDAERVAIKVFADNLRDLLLAAPAGPRVVLGLDPGIRTGVK 367 Query: 342 VAVVDATGKLVATDTIYPHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYL 399 VAVVDATGKLV T T+YPH + + +A LCEKH V L+AIGNGTASRET++ Sbjct: 368 VAVVDATGKLVDTATVYPHEPRKDWDGSLHILARLCEKHGVSLIAIGNGTASRETDKLAA 427 Query: 400 DVQKQFPKVTAQ---KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE 456 D+ K K + + KV+VSEAGASVYSASE A+QE PD+DVSLRGA SIARRLQDPLAE Sbjct: 428 DLIKLMAKSSERLMDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRLQDPLAE 487 Query: 457 LVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMM 516 LVKIDPKSIGVGQYQHDV+Q +LA+ LDAVVEDCVN+VGVDLN ASVPLL+RV+GL+ + Sbjct: 488 LVKIDPKSIGVGQYQHDVNQGELAKTLDAVVEDCVNSVGVDLNMASVPLLSRVSGLSGSV 547 Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 A+ +V WR+ NG F NRQQLLKV+ LG K FEQ AGFLRI GDNPLD + VHPE Y VV Sbjct: 548 AKAVVRWREANGAFANRQQLLKVAGLGAKTFEQSAGFLRIRGGDNPLDMTGVHPETYAVV 607 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 ERI+A T Q + DLMG + L+ LK F +E FGV TV DI+ ELEKPGRDPRP+FK A Sbjct: 608 ERIIAKTGQPVADLMGRADMLKTLKPELFANETFGVITVKDILGELEKPGRDPRPDFKVA 667 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 +F DGVE + DL+ GM+LEG V+NV FGAFVD+GVHQDGLVH+S LS+KFV D +VK Sbjct: 668 RFNDGVEDIKDLKEGMVLEGTVSNVAAFGAFVDLGVHQDGLVHVSQLSHKFVTDAREIVK 727 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQN 741 GDIVKV+V+EVD+ RKRIALTM+L P ++ G+ R Q Sbjct: 728 TGDIVKVQVVEVDVARKRIALTMKLGAAPSRQSS---AGDNRFQG 769 >UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZC98_9GAMM Length = 723 Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/714 (50%), Positives = 480/714 (67%), Gaps = 5/714 (0%) Query: 13 EIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQA 72 ++Q Q++A ++L D GNTVPFIARYRKE T GLDDTQLR LE+ L Y R+L ER++A Sbjct: 11 QLQLSVPQINAFIQLYDAGNTVPFIARYRKEATYGLDDTQLRQLESSLLYQRDLAERKEA 70 Query: 73 ILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWS 132 I KS+ Q KL+ L I +K +LE LY P+K KR ++ +IA++AGL LAD LW Sbjct: 71 IYKSLLSQNKLSAALKTQIINIDNKRDLETLYQPFKSKRVSKAKIAMDAGLMELADKLWF 130 Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 + +Y+ +G D K+ L GA IL+ER + D +L K+ + L + L S Sbjct: 131 QDDMQADALLKRYINKKQGFNDEKSVLQGASDILIERLSLDISLSHKLVETLHRKGLLSS 190 Query: 193 TVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES 252 +V+ K++E KF+DYFD+ E L T+P+HR LA+ R ++EG L+L ++ D K+S Sbjct: 191 SVIKAKQQEAQKFKDYFDYSERLKTLPAHRYLALLRAKSEGFLRLKVDFD--MHSTDKKS 248 Query: 253 YCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFA 312 E +I DHLG +SWRK ++S W+ K+ E ++ ++E+A A +FA Sbjct: 249 VYENLIADHLGFSFARLSKNSWRKSIISEAWQTKLNKQTERQIFSLLKEQAHSRASQLFA 308 Query: 313 RNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT--GQAAKAAMT 370 NL DLLMAAPAG + +GLDPG ++G K+ V+ TGKL+ TIYPH Q+ A Sbjct: 309 TNLKDLLMAAPAGEKIILGLDPGFKSGCKIVVISGTGKLLDFATIYPHAPQRQSESAKKK 368 Query: 371 VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAA 430 V +K++V+L+AIGNGTASRE++ F V + + V+VSEAGASVYSASELA Sbjct: 369 VDEFIKKYHVQLIAIGNGTASRESDDFIKSVLED-ASLNLPCVMVSEAGASVYSASELAC 427 Query: 431 QEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDC 490 EFP LDVS+RGAVSIARRLQDPLAELVKID K+IGVG YQHD++Q QL + L VVEDC Sbjct: 428 IEFPQLDVSIRGAVSIARRLQDPLAELVKIDAKAIGVGLYQHDLNQVQLGKNLQVVVEDC 487 Query: 491 VNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC 550 VNA+GVD+N ASV LLT +AGL + +A+NIV +RD NG F +R L+KV RLG KA++Q Sbjct: 488 VNAIGVDVNRASVQLLTFIAGLNKSIAENIVQYRDTNGPFTSRSSLMKVPRLGAKAYQQA 547 Query: 551 AGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKF 610 AGFLRI G +PLD S VHPEAY +V RI +K L+ NS L+ L F E+F Sbjct: 548 AGFLRIIEGIDPLDNSAVHPEAYALVSRIAIDQNCTVKALLKNSQALKMLDIDTFISEQF 607 Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 G ++ II EL P RDPRP+F T ++D + ++DL M ++G +TNVT+FGAFVDI Sbjct: 608 GRLSIEQIISELAAPRRDPRPDFCTVSYSDEINKISDLYTDMEIQGVITNVTSFGAFVDI 667 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 GVHQDGL+H+S L+NKFV+DP VVK G IV+V+VL VD +RKRI+L++RL + Sbjct: 668 GVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQVRVLSVDSERKRISLSLRLQDH 721 >UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUG1_RHOBA Length = 750 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/719 (52%), Positives = 491/719 (68%), Gaps = 22/719 (3%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E+ +QV A + LL+ GNT+PFIARYRKE+TGGLD+ LR +E L L R Sbjct: 43 IARELNLPEKQVAAVIELLEAGNTIPFIARYRKEVTGGLDEIALRAIEDALEKHTALLAR 102 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 + +L +I EQG LT +L K I A LE LYLPYKPKRRTR IA E GL+PLADL Sbjct: 103 KATVLNTIEEQGALTAELRKQIEACTDLRTLEALYLPYKPKRRTRATIAREKGLQPLADL 162 Query: 130 LWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 L + + +V + VADT AAL GA I+ E+++ED + + + K Sbjct: 163 LLKQTKLPQSKQQTLQSFVNQELDVADTDAALAGALDIVAEQWSEDPTVREWMVEKGTKF 222 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 + S V GK++E K+ Y D E S +P HR LAM RG EGVL++ L + +E Sbjct: 223 GQITSAVKRGKKDEADKYEAYLDRSESASRIPGHRLLAMLRGEAEGVLRVGL----KMEE 278 Query: 248 PPKESYCEQIIMDH----LGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 S+ + + + L +A D +++ + T ++ ++ ++E+A Sbjct: 279 DRAISHVKSTFIQNRSFEFARELESAAEDCFQRLLQPAT---------QSTVLQMLKEKA 329 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 ++EAI+VF +NLH+LLM+ PAG R T+G+DPG RTG KVAVVD TGK +A TIYP + Sbjct: 330 DEEAIDVFGKNLHELLMSPPAGPRVTIGIDPGFRTGCKVAVVDGTGKFLANTTIYPTPPK 389 Query: 364 A--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + A A+ + AL +KHNVEL+AIGNGTASRET+ F + + K+ KV+VSE+GAS Sbjct: 390 SDTAGASKQLLALIKKHNVELIAIGNGTASRETDAFVGQLIRD-NKLDVTKVMVSESGAS 448 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 +YSASELA +EFPDLDV++RGA+SIARRLQDPLAELVK DPKSIGVGQYQHDV+QTQL + Sbjct: 449 IYSASELAGKEFPDLDVTVRGAISIARRLQDPLAELVKTDPKSIGVGQYQHDVNQTQLRK 508 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VE CVN VGVDLN ASVPLL+RVAG+ +A+NIV +RD NG+F +R++L KV + Sbjct: 509 CLDRTVESCVNRVGVDLNMASVPLLSRVAGIGPKLAENIVQYRDTNGRFGSRKELTKVPK 568 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG KAFEQ AGFLRI GD PLD S VHPE+Y +V R+ +K L+GN++ + L+ Sbjct: 569 LGKKAFEQAAGFLRIRGGDEPLDNSAVHPESYTLVSRMAKQLHADVKTLVGNATLSQKLQ 628 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 F D++FG+PT+ DII EL KPGRDPR EFK AQF D V++M DL+ GM+LEG +TNV Sbjct: 629 PDSFVDDRFGIPTIRDIIAELGKPGRDPRSEFKVAQFDDSVQSMEDLREGMVLEGVITNV 688 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 T+FGAF+D+GVHQDGL+H+S L+N+FV DP VV GD+VKVKVLE+DL RKRIA++ + Sbjct: 689 THFGAFIDLGVHQDGLIHVSQLANQFVSDPSEVVSVGDVVKVKVLEIDLDRKRIAVSKK 747 >UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular organisms RepID=B3E6B1_GEOLS Length = 762 Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/752 (50%), Positives = 494/752 (65%), Gaps = 36/752 (4%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 +II E R Q+ V LL EG TVPFIARYRKE TG LD+ Q+R +E RL+Y ELE Sbjct: 13 KIITEETGLRQGQISNTVNLLQEGATVPFIARYRKEQTGELDEVQIRTIEERLAYFTELE 72 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 RRQ IL SI EQGKLT +L I AT KTELEDLYLPYKPKRRT+ IA E GLEPLA Sbjct: 73 ARRQTILASIDEQGKLTPELQARIEATRQKTELEDLYLPYKPKRRTKATIAKERGLEPLA 132 Query: 128 DLLWSD--PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 DL+ + S + AAA +V +K V + AL+GA +IL ER A+DA A VR W Sbjct: 133 DLMAAQELTSGSALEAAAPFVDHEKEVPTPETALEGAGHILAERLADDADCRAMVRRLTW 192 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + +V+ V S K+E+ KF Y+D+ EPL +PSHR LAM RG E VL+LSL PQ Sbjct: 193 EQGVMVTKVASDKKEQVTKFEMYYDYQEPLKEIPSHRMLAMRRGEKEEVLRLSLQV-PQA 251 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPA--DSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + I+ L RL + W + V ++ + +E EL ++ A Sbjct: 252 E-----------ILAGLKHRLIKGESVFKPWLESVAEDAYKRLIATSIEVELRLQAKDLA 300 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 ++ AI +FA+NL +LL+A PAG R +G+DPGLR G K+A VD TG+ + TIYPHTG Sbjct: 301 DEAAIAIFAKNLKNLLLAPPAGGRRVLGIDPGLRAGSKLAAVDQTGRFLEHVTIYPHTGA 360 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV----QKQFPKVTAQKVIVSE 417 + +A + L E H +E++AIGNGTA RE E F + K P V +VSE Sbjct: 361 GRVDQARADLLRLVEAHGIEMIAIGNGTAGREMELFTKETLAKAGKHLPVV-----MVSE 415 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGAS+YSASE+A +EFP+LD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV+Q Sbjct: 416 AGASIYSASEIAREEFPELDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQA 475 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 L + LD VVE VN VGVDLNTAS LL+ VAG+ + + I RDENG F +R+ LL Sbjct: 476 MLKKSLDEVVESGVNYVGVDLNTASWALLSYVAGVGPALGKAIARHRDENGPFSSRKGLL 535 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 KVSR G KAFEQ AGFLRI G +PLD S VHPE YP+VE++ +L++L + Sbjct: 536 KVSRFGAKAFEQAAGFLRIRGGKHPLDNSAVHPERYPLVEQMAKDLGVSLEELAKTPALA 595 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 + + ++ G+PT+ DI++EL+KPGRDPR +F+TA F D + ++DLQ GMIL+G Sbjct: 596 EKIDLKKYVSDQVGLPTLRDILEELKKPGRDPRQQFQTADFRDDIREISDLQEGMILQGV 655 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VTNVT FGAFVDIGVHQDGLVH+S L+N+F++DP+ V+ G +VKVKVL D QRKRIAL Sbjct: 656 VTNVTAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVVKVKVLSADPQRKRIAL 715 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPR 749 +++ + +PG R+ PAA+P+ Sbjct: 716 SIK-ESEPGGAAVRKAAS--------PAAQPK 738 >UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria RepID=B0CAN6_ACAM1 Length = 720 Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/726 (50%), Positives = 484/726 (66%), Gaps = 18/726 (2%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+N +I++ E+ P+++ A+ L EG T+PF+ARYRKE TG +D+TQLR L R Sbjct: 1 MLN--IVQILSQELSISPQRLQNALDLFAEGATIPFVARYRKERTGQMDETQLRQLSERF 58 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YL ELEER++ IL+SI++Q KLT+ L I A L KTELEDLYLPY+PKRRTR IA E Sbjct: 59 TYLTELEERKKTILESIAQQNKLTELLQAKIEACLLKTELEDLYLPYRPKRRTRATIAKE 118 Query: 121 AGLEPLADLL--WSDPSHT--PEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 GLEPLA L + P+ T ++A Y +K VA T+ AL GA IL E A+ A + Sbjct: 119 KGLEPLAQWLQALNKPTATLSQDLATEAARYINKDVATTEDALQGASDILAEGIADQAEI 178 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 ++ ++ VS V S E KF Y + + +H LA++RG EG+L+ Sbjct: 179 RTHLKHRFFQVGEFVSQVKSKYPEGSTKFEMYRSYQARAKNILAHNLLALYRGEAEGILK 238 Query: 237 LSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELM 296 + L D +E E++I + A D +R GVV + + + E+ Sbjct: 239 VELAID---EERILGDIEERVIRSKI-----RAVRDFFR-GVVKDAYTRLIKPSVVKEVR 289 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + A+ E+I FA NL +LL+++PAG++ T+G+DPG RTG KV +D TGK + Sbjct: 290 AACKAEADSESIQTFATNLRELLLSSPAGMKPTLGIDPGFRTGCKVVALDHTGKFLEYQA 349 Query: 357 IYPH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 I+PH GQ +AA TVA L + + ++L+AIGNGTA RET+ F DV K + KV+ Sbjct: 350 IFPHQAVGQRDQAAKTVARLIQTYQIDLIAIGNGTAGRETDAFVADVLKTLDR-KPIKVM 408 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+E+GAS+YSASE+A EFPDLD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV Sbjct: 409 VNESGASIYSASEIAIAEFPDLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDV 468 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 Q L +KL+ VE CVN VGVDLNTAS LLT V+G+T +A NI+A+R++NG F+NR+ Sbjct: 469 DQKLLKQKLEETVESCVNYVGVDLNTASKELLTFVSGITGAIANNIIAYRNQNGAFKNRK 528 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 QLLKV++LGPKAFEQ AGFLRI GDNPLD + VHPE+Y VV+ I A + L + Sbjct: 529 QLLKVAKLGPKAFEQAAGFLRIRTGDNPLDNTAVHPESYGVVKTISADLELPLSQIAKIP 588 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 + LR + E G PT+ DI+ ELEKPGRDPR EFK A F +G+ + DL+P M L Sbjct: 589 AHLRPGDLKTYVTETIGEPTLKDIMAELEKPGRDPRAEFKYATFKEGITELTDLKPEMEL 648 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG VTNVTNFGAFVD+GVHQDGLVHIS ++++FV+DP +VK G +VKV+VLEV+ + KR Sbjct: 649 EGIVTNVTNFGAFVDVGVHQDGLVHISQMADQFVKDPKQIVKVGQVVKVRVLEVNQKLKR 708 Query: 715 IALTMR 720 I L+MR Sbjct: 709 IGLSMR 714 >UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria RepID=B3QUX6_CHLT3 Length = 758 Score = 677 bits (1747), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/728 (48%), Positives = 486/728 (66%), Gaps = 33/728 (4%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 +++ E+ + QV+ + LLD+G T+PFIARYRKE TGGLD+ QLR L R YL+ELE Sbjct: 6 QVLTEELSVKLFQVENTLALLDDGATIPFIARYRKERTGGLDEIQLRTLAERYEYLQELE 65 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 +R++ +LKSI+EQGKLTD+L + I L KTELEDLYLPYKPK+RT+ IA E GLEPLA Sbjct: 66 DRKETVLKSINEQGKLTDELKEKIENCLGKTELEDLYLPYKPKKRTKATIAKEKGLEPLA 125 Query: 128 DLLWSDPSHTPEVA-----AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 + + S + P AA+Y+ +K V + AL GA IL E+ A+ A A +R+ Sbjct: 126 EFIHSLNTAAPAEGNFMEEAAKYISEEKEVKTAEEALQGASDILAEQLADKADFRAYIRN 185 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 ++ + VS + EE K+ Y + + + H LA+ RG ++GV+ S+ Sbjct: 186 FIMDEGYFVSKIKDEFEEGTTKYEMYRNFKVKVKDIQPHNMLALRRGESDGVVAFSV--- 242 Query: 243 PQFDEPPKESYCE--QIIMDHLGLR--LNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 +FDE SY E +I + LR L+ D++ + ++T L+G Sbjct: 243 -EFDEAVVLSYLESQEIFTANADLRAFLSKMVKDAFGR-------------LMKTTLIGE 288 Query: 299 VR----ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVAT 354 VR +A++++I F NL +LL+++PAG++ T+G+DPG RTG K+ +D TGK + Sbjct: 289 VRLDRRMKADEDSIKTFEANLRELLLSSPAGMKPTLGIDPGFRTGCKIVAIDETGKFLEY 348 Query: 355 DTIYPHTGQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 TI+PHTG+A AKA + L EK+ EL+AIGNGTA RET+ F DV + K Sbjct: 349 KTIFPHTGEAKKAKAVEELKTLIEKYKTELIAIGNGTAGRETDIFVRDVIASL-ETKPVK 407 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 V+V+E+GASVYSAS +A +EFPDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQH Sbjct: 408 VMVNESGASVYSASPVAIEEFPDLDVSVRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 467 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV Q L +KL VE CVN VGVDLNTAS LL+ V+G+ +++N+V +R+E+G FQ+ Sbjct: 468 DVDQKLLKKKLGESVESCVNFVGVDLNTASKELLSYVSGINSAISKNVVEYRNEHGAFQS 527 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R +L+++ + GPK FEQ AGFLRI G+NPLD + VHPE+Y +V+RI + + Sbjct: 528 RGELMQIDKFGPKTFEQAAGFLRIRGGENPLDNTAVHPESYSIVQRIAEDLGVPVAQVTS 587 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 S+++++ + E+ G PT+ DI+ ELEKPGRDPR EF+ A+F+D V+ M DLQ GM Sbjct: 588 LGSKIKSVDLKKYVTEEVGEPTLIDILNELEKPGRDPREEFRYAEFSDAVKAMEDLQIGM 647 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 LEG VTNVT+FGAFVDIGVHQDGLVH+S L++ +V DP VK G IV V+VL+V+L Sbjct: 648 KLEGVVTNVTDFGAFVDIGVHQDGLVHVSELADNYVSDPLEAVKVGQIVTVRVLDVNLSL 707 Query: 713 KRIALTMR 720 +RI+L+MR Sbjct: 708 RRISLSMR 715 >UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomonas RepID=A6VTC2_MARMS Length = 720 Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/703 (50%), Positives = 473/703 (67%), Gaps = 14/703 (1%) Query: 22 DAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQG 81 D ++L +EG TVPFIARYRKE T G+ D LR+ R YL EL++R+++IL +++ Sbjct: 20 DNIIQLFEEGATVPFIARYRKENTSGMSDQDLRSFYDRWQYLVELKKRKESILALLADDS 79 Query: 82 KLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVA 141 ++D + K I +SK ELEDLY P+K R+T+ A E GL+ LA+L+WS A Sbjct: 80 NVSDAIRKKIQNAISKNELEDLYSPFKKTRKTKADEAREQGLQSLAELVWSGERSDTLSA 139 Query: 142 AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEE 201 + + V ++AL+G IL E A D+ +L K R L K+ L S V+ GK+E+ Sbjct: 140 IDAWCKQNNIVMSAESALEGVTEILNEAIANDSDVLKKGRAVLLKDGLLTSRVLRGKKEQ 199 Query: 202 GAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDH 261 G KFRDYFD+ E ++ VP HR LA+FRG+ E +L+LS++ + E+Y + +I H Sbjct: 200 GEKFRDYFDYQEAINKVPPHRLLALFRGKKESILKLSVSLKNE------ENYPDVLIFPH 253 Query: 262 LGLRLNNAPADSWR-----KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLH 316 L L+ +S+R + ++ W K+L LET+++ +++RAE+ AI VFA NL Sbjct: 254 LNQLLDTNLPESYRVTSLQRKYLNLAWEKKLLPKLETDVLSQLKDRAEEGAIQVFADNLQ 313 Query: 317 DLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AAKAAMTVAAL 374 DLLMAAPAG +G+DPG R GVK+AV+D G L+ IYPH Q +A+ ++ L Sbjct: 314 DLLMAAPAGAHRVLGVDPGFRNGVKLAVIDEQGSLLDHGVIYPHGPQNRTQEASTMLSQL 373 Query: 375 CEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP 434 KHN+ VAIGNGTASRETE + + + + V+VSEAGASVYSAS +A QEFP Sbjct: 374 IRKHNIGWVAIGNGTASRETEALVKALISE-SNLDCRAVVVSEAGASVYSASPIAIQEFP 432 Query: 435 DLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 DLDV++RGAVSIARR QDPLAELVKIDP++IGVGQYQHDV L++ L VVEDCVN V Sbjct: 433 DLDVTIRGAVSIARRFQDPLAELVKIDPQAIGVGQYQHDVKVALLSKSLANVVEDCVNRV 492 Query: 495 GVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFL 554 GVD+N ASV LL+ V+GLT +AQNIV +R + G+ ++R +LLK+ +G K FEQCAGFL Sbjct: 493 GVDINLASVSLLSYVSGLTNRLAQNIVDYRQQKGRIESRSELLKIKGIGDKCFEQCAGFL 552 Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 RI +G LD S VHPE+YP+V+++ A + DL+ NSS L+ LK + + G T Sbjct: 553 RILNGKEALDQSGVHPESYPLVQKMAAQLKLKANDLLNNSSALQQLKQFAPSFAQAGDFT 612 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 TDI+ EL KPGRDPRPEF+ A F V+ + D+Q GM LEG VTNV FGAFVD+GVHQ Sbjct: 613 YTDILNELAKPGRDPRPEFRYASFDHSVQKLEDVQEGMTLEGVVTNVAAFGAFVDLGVHQ 672 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 DGL+HIS L+++FV+DP +V+ G +VKV VLEVD+QRKRIAL Sbjct: 673 DGLIHISQLADRFVKDPRDLVRVGQVVKVTVLEVDVQRKRIAL 715 >UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria RepID=B8HZ35_CYAP4 Length = 763 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/784 (48%), Positives = 499/784 (63%), Gaps = 35/784 (4%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+N +++A E++ +P QV A+ LL EG TVPFIARYRKE TG +++TQLR+L R Sbjct: 1 MLN--LPQLLAAELKLKPFQVANALELLAEGATVPFIARYRKERTGEMNETQLRDLFDRY 58 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YL ELEER+ AIL +I++Q KLT DL I A K LEDLYLP++PKRRTR IA E Sbjct: 59 TYLTELEERKTAILAAIAQQDKLTPDLEAKIAACQQKNTLEDLYLPFRPKRRTRATIARE 118 Query: 121 AGLEPLADLL--WSDPSHTPE---VAAAQYVYADKGVADTKAALDGARYILMERFAEDAA 175 GLEPLA+ L + P+ P +AAA+Y+ KGV AL GA IL E A+ A Sbjct: 119 KGLEPLANFLKTLNHPTAVPTDLALAAAKYIAEAKGVRTATDALQGASDILSEEIADKAN 178 Query: 176 LLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVL 235 L A +RDYL L + V G E +F Y + P+ T+P+H LA++RG EGVL Sbjct: 179 LRAYLRDYLLTTGVLNAKVKGGHPEGTTRFEMYRHYQAPIKTIPAHNLLALYRGEAEGVL 238 Query: 236 QLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 + L FDE + E LR + + +++ ++ + L TE+ Sbjct: 239 VVELT----FDEAAVLADLES-----QELRAKQQEVRDFYRQMLNDAFQRLLKNSLITEV 289 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 + A+ E+I F NL +LL+AAPAG+++T+ +DPG RTG KV V+D TGK + Sbjct: 290 RSAKKVEADLESIRTFEANLRELLLAAPAGMKSTLAIDPGFRTGCKVVVLDPTGKFLEYQ 349 Query: 356 TIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV-QKQFPKVTAQK 412 TI+PH Q KA T+ L +++ VEL+A+GNGTA RET+ F ++ Q PK K Sbjct: 350 TIFPHQSVEQRQKAGQTLLKLIDRYQVELIAVGNGTAGRETDEFVAELLQTLEPKPV--K 407 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 V+V+E+GAS+YSAS +A EFP+ D+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQH Sbjct: 408 VMVNESGASIYSASPVAIAEFPEQDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQH 467 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV Q L +KLD VE CVN VGVDLN AS LLT V+G+T +A NI+ +R++NG F N Sbjct: 468 DVDQKLLKKKLDETVESCVNYVGVDLNLASKELLTFVSGVTPTIAGNIITYRNQNGAFSN 527 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R+QLL+V++LGPKAFEQ AGFLRI +G NPLD + VHPE Y +VE I L + Sbjct: 528 RRQLLQVAKLGPKAFEQAAGFLRIRNGQNPLDNTAVHPERYNLVETIARDLGVPLAQITQ 587 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 + L N + + G PT+ DI+ ELEKPGRDPR EF A+F V+ ++DL GM Sbjct: 588 VAERLNNTDLKKYVTDTIGEPTLRDILAELEKPGRDPRAEFTFARFRADVKAISDLSVGM 647 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 LEG VTNV NFGAFVDIGVHQDGLVH+S L+++FV DP +VK G +V V+VLEVD + Sbjct: 648 QLEGMVTNVANFGAFVDIGVHQDGLVHVSQLADRFVSDPKQIVKVGQVVNVRVLEVDEKL 707 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP---AGNSAMMDALAAAM 769 KRI+L+MR D T R+G Q+ + P+ + +QP AG ++ L A Sbjct: 708 KRISLSMRSD-----TPERQG------QSPVSSPAPKSQRSQPKPSAGKPPTLEDLKAKF 756 Query: 770 GKKR 773 GK R Sbjct: 757 GKHR 760 >UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Bacteria RepID=C9RK55_FIBSS Length = 797 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/755 (47%), Positives = 502/755 (66%), Gaps = 31/755 (4%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 F IIA E+ +V A+ L+D+G T+PFIARYRK+ TG L++ +LR++ R YL+E Sbjct: 3 FSAIIAEELNLEVWRVSKALELMDQGGTIPFIARYRKDQTGTLNEIELRDISHRRDYLQE 62 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L +R++ ILKSI EQGKLT +L I A KT LED+Y P+KPK+RTR IA E GLEP Sbjct: 63 LVDRKETILKSIEEQGKLTPELKAQIEACKDKTLLEDIYAPFKPKKRTRATIAKELGLEP 122 Query: 126 LADLLWS--DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 LA L+W+ + +T E A Y+ +KG+AD +AAL GA IL E A++A +R+ Sbjct: 123 LARLMWAQENTGNTAEEIARIYLSEEKGLADPRAALKGAADILAEEVADNAEYRQYLRNK 182 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + K +VS V E++ KF+DY+D EP+S +PSHR LA+ RG E VL+LS+ Sbjct: 183 VEKTGVMVSKVKKDFEKQETKFKDYYDFSEPVSKIPSHRMLALRRGEKEKVLRLSI---- 238 Query: 244 QFDEPPKE---SYCEQIIMDHLGL---RLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 E P E Y + ++ H + L + D+W + + +E+E+ Sbjct: 239 ---EVPNEEMVGYLQNQVIKHDSVWKPYLEDMCKDAWERLLQP---------SMESEVRL 286 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTI 357 +++ AE+EA VF++NL D+L+AAPAG +A + LDPG RTG KVAV+D GK + I Sbjct: 287 LLKDAAEEEAFKVFSKNLQDVLLAAPAGHKAVLALDPGFRTGCKVAVLDKNGKFMDHGII 346 Query: 358 YPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIV 415 PH A AA+ + +L +K+ ++L+AIGNGTASRET+ F ++ +F +VIV Sbjct: 347 KPHEPWNDKAGAAVYLMSLIDKYQIDLIAIGNGTASRETDAFCGEMALKFKGKVPPRVIV 406 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 SEAGASVYSAS +A EFP DV+ RGA+SI RRLQDPLAELVK+DP+SIGVGQYQHDV+ Sbjct: 407 SEAGASVYSASMIAIAEFPKEDVTTRGAISIGRRLQDPLAELVKVDPQSIGVGQYQHDVN 466 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +L ++LD VVE CVN VGVD+N+AS PLL+ VAGL+ +++ IV +R+ENG + +R+ Sbjct: 467 QRELKKRLDEVVESCVNMVGVDVNSASAPLLSHVAGLSNTLSEAIVKYREENGAYASRED 526 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 L KV GPKAFEQ AGF+RI +NPLD S VHPE Y +VE++ +K+++GN+ Sbjct: 527 LKKVKGFGPKAFEQAAGFMRIPGAENPLDDSAVHPENYALVEKMAEKVGVPVKEMVGNAD 586 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 ++ +K +F ++ G T+ DI+KEL+KP RDPR EF+ A+F D ++T+NDL G +E Sbjct: 587 AVKGIKLDEFLSDEVGRATLEDILKELQKPSRDPRKEFRYAKFDDRIKTINDLVTGSWME 646 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 G VTNV NFGAFVDIGVHQDGLVHIS +S+K+V D V+ GD+VKV+V+ VD +KRI Sbjct: 647 GVVTNVANFGAFVDIGVHQDGLVHISEISDKYVTDAKDVLTVGDVVKVRVVAVDANQKRI 706 Query: 716 ALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +L+M+ + +T+ G G P+ R PRG Sbjct: 707 SLSMKQE----QTDGVAGAGANGPRGQR-VGGPRG 736 >UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellaceae RepID=A5WHC1_PSYWF Length = 849 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 366/779 (46%), Positives = 492/779 (63%), Gaps = 39/779 (5%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E+ +P QVDA V+L DEG TVPFIARYRKE T GLDD+QLR LE L+Y R++ R Sbjct: 43 LAKELGIKPAQVDAFVKLYDEGATVPFIARYRKEKTQGLDDSQLRALEKGLNYERDMASR 102 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R IL+ + QG LT+ L I SK ELED+YLPY+P+RR+ A AGL+ +A Sbjct: 103 RAKILELLQSQGNLTEALQSRIEQATSKLELEDIYLPYRPRRRSLAAKARAAGLDKVAKT 162 Query: 130 LWSDPSHTPEVAAAQY-----VYADKGV------ADTKAALDGARYILMERFAEDAALLA 178 L ++ TP A + Y + D G +DT+ L G I+++ + ++ LL Sbjct: 163 LLNNEV-TPLDALSDYSLPETITDDTGAEIDVDFSDTEKQLAGVEAIIIDGWTQELELLD 221 Query: 179 KVRDYLWKNAHLVSTVVSG-KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 +R K A + S++ S K E G KF DYF+H E L+ +P+HR LAM RGR E VL L Sbjct: 222 NLRSGFAKTATINSSLASDEKREVGEKFADYFEHSESLARLPNHRLLAMLRGRQENVLVL 281 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWT---WRIKVLMHLETE 294 ++ + D P + +++I L N +++ W+ K HLE Sbjct: 282 KVDGE---DAP----FVDKVINK---FELENTKPQERHDFLITAANSLWKDKWRPHLEHR 331 Query: 295 LMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV-- 352 L+ R AE +AI+VFA NL LLMAAPAG + +G+DPG+R GVK+AV+DA G+++ Sbjct: 332 LLTEKRLAAEADAIDVFASNLQHLLMAAPAGRKVILGVDPGIRHGVKMAVIDAQGQVMQD 391 Query: 353 -----ATDTIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQF 405 A T+YP + +A T+A L + H VELVAIGNGTASRET+ ++ + Sbjct: 392 GEGKPAIATVYPFAPDNKMDEAKATIAQLLKDHQVELVAIGNGTASRETDAMIKELIEAD 451 Query: 406 PKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSI 465 +TA+ V+V+E+GASVYSASELA+ E DLDVS+RGAVSIARRLQDPL+ELVK++PK+I Sbjct: 452 ETITAKAVVVNESGASVYSASELASDELADLDVSIRGAVSIARRLQDPLSELVKVEPKAI 511 Query: 466 GVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRD 525 GVGQYQHDV+Q QL+ LD V +DCVNAVGVD+NTAS +L +AGL R +AQ IV +R Sbjct: 512 GVGQYQHDVNQAQLSDSLDKVTQDCVNAVGVDVNTASPAILAHIAGLNRNVAQQIVNYRK 571 Query: 526 ENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQ 585 E+G F NR+QL V RLG K FEQ AGFLRI G+ PLDA+ VHPE+Y +V+ +L + + Sbjct: 572 EHGAFTNREQLKDVPRLGVKTFEQAAGFLRIRDGEEPLDATGVHPESYDLVKALLDKSGK 631 Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 ++ D++GN S + L ++ I +EL KP DPRPEFKTAQF D V ++ Sbjct: 632 SIADVLGNDSLINTLSTDGIDAANDDNISIAAIKQELAKPAHDPRPEFKTAQFRDDVNSV 691 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 +DL+ GM LEG VTNVT FG FVD+GVHQDGLVHIS ++N FVEDP +VK GDIV V+V Sbjct: 692 SDLEEGMQLEGVVTNVTGFGCFVDVGVHQDGLVHISEMANDFVEDPMNLVKPGDIVSVRV 751 Query: 706 LEVDLQRKRIALTMRLDEQPGETNA----RRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 + +D +R RI +M+ ++ A R N +PA + A+PA +A Sbjct: 752 ISIDAKRNRIGFSMKSEDAASAKRATSPQRSTDKNAENAATKPAKARKNSRAKPANKAA 810 >UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria RepID=A0LJC1_SYNFM Length = 788 Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/744 (48%), Positives = 484/744 (65%), Gaps = 16/744 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ +IAGE+ ++ AAV LL EG TVPFIARYRKE TG LD+ ++ + RL+ Sbjct: 26 MNEQHILLIAGELGLPEHRIRAAVELLGEGATVPFIARYRKEATGSLDEMEIAAIRDRLA 85 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 L L++RR +LKS+ EQ KLT++L KA+ S + LEDLYLP++PKRRTR +A E Sbjct: 86 QLDALDKRRATVLKSLEEQEKLTEELRKAVLEAGSLSALEDLYLPFRPKRRTRATVARER 145 Query: 122 GLEPLADLLWSDPSHTPEVAAAQ-YVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLADL+++ T VA A+ +V D+ V AL GAR I+ ER E+A A++ Sbjct: 146 GLEPLADLIFAQNDSTDPVAEAERFVDPDRQVVCADDALAGARDIVAERINENAGARARL 205 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 R+ + VV GKE EG ++RDY+D EP++ PSHR LA+ RG EG L L + Sbjct: 206 RELFAGRGTTRARVVPGKEGEGIRYRDYYDWEEPVADAPSHRVLAVLRGEKEGFLTLHIA 265 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 P E+ I ++ L +R ++PA + ++ + LETE + Sbjct: 266 --------PLETEALSI-LESLFVR-GDSPASRQVAAAAADGYKRLLAPSLETEARQLSK 315 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERA+ EAI VFA NL LLMA P G R + +DPG RTG KV +D GKL+ +T+YPH Sbjct: 316 ERADREAIRVFADNLRHLLMAPPLGARNVLAVDPGFRTGCKVVCLDPQGKLIHHETVYPH 375 Query: 361 TGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 TG+ +AKAA + L +E VAIGNGTA RETE F V+ Q ++V+E+ Sbjct: 376 TGERASAKAAERLRDLVAGFGIEAVAIGNGTAGRETEAF---VRGLGLPTAVQIIMVAES 432 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS +A +EFPD DV++RG+VSI RRL DPLAELVKIDPK+IGVGQYQHDV Q++ Sbjct: 433 GASVYSASAVAREEFPDQDVTVRGSVSIGRRLTDPLAELVKIDPKAIGVGQYQHDVDQSE 492 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L + LD VV CVNAVGV++NTAS LLT V+GL +A+++VA RD NG F++R +L K Sbjct: 493 LKKSLDDVVMSCVNAVGVEVNTASPQLLTYVSGLGPQLARSVVAHRDRNGPFRSRNELKK 552 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V+RLGPKAF+Q AGFLR+ +NPLDAS VHPE+Y +VE + ++ DLM ++ + Sbjct: 553 VARLGPKAFQQAAGFLRVRGSENPLDASAVHPESYHIVEAMARDLGCSVTDLMRDADLRK 612 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + + + G+PT+ DI+ EL KPGRDPR F++ FA G+E DL+ GM L G V Sbjct: 613 RIDPARYVTAHVGLPTLLDILSELAKPGRDPRATFESFSFAQGIEKPEDLRAGMKLPGIV 672 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNVT FGAFVDIGVH+DGLVH+S LS+ FV+DP VV+ V V VL+VDL+R RI+L+ Sbjct: 673 TNVTAFGAFVDIGVHRDGLVHVSELSDCFVKDPRQVVRVQQRVTVTVLDVDLERGRISLS 732 Query: 719 MRLDEQPGETNARRGGGNERPQNN 742 M+ PG + + +RP N Sbjct: 733 MKEGRPPGAESKKTKARGDRPVKN 756 >UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria RepID=C6E3L9_GEOSM Length = 756 Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 370/739 (50%), Positives = 492/739 (66%), Gaps = 30/739 (4%) Query: 25 VRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLT 84 V LL+EG TVPFIARYRKE TG LD+ Q+R +E L Y REL ER+ +LKSI EQGKLT Sbjct: 30 VALLNEGGTVPFIARYRKEQTGELDEVQIRQIEDLLIYHRELAERKVTVLKSIEEQGKLT 89 Query: 85 DDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSD--PSHTPEVAA 142 +L+ I + KT+LEDLYLPYKPKRRT+ IA E GLEPLA+L+ + + +P AA Sbjct: 90 PELSARIASCRKKTDLEDLYLPYKPKRRTKATIAREKGLEPLAELIAAQELATGSPTEAA 149 Query: 143 AQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEG 202 A +V A+ GV D +AAL GA +I+ E+ +E+A L +VRD + S ++ ++ Sbjct: 150 APFVNAELGVTDAEAALAGAAHIIAEQLSENADLRGRVRDLTREQGIFGSQLMGDGADKD 209 Query: 203 AKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHL 262 KFR Y D+ EPL ++PSHR LAM RG E VL+L+L A P+E Sbjct: 210 GKFRMYHDYQEPLKSIPSHRMLAMRRGEKEDVLRLALLA-------PEEEIVG------- 255 Query: 263 GLRLNNA--PADSWRKGVVSWT----WRIKVLMHLETELMGTVRERAEDEAINVFARNLH 316 RL A +S KG++ ++ + +E EL + RA++ AI VFA+NL Sbjct: 256 --RLKGALVKRESIFKGILEAAAADAYKRLIAPSIEVELRLEAKTRADEAAIAVFAQNLK 313 Query: 317 DLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAA--L 374 +LL+ PAG R +G+DPGLRTG K+A + TG+ + TIYPHTG A A + Sbjct: 314 NLLLLPPAGGRRVLGIDPGLRTGCKLAAISETGRFLEHVTIYPHTGGAKAEAAGAELAGM 373 Query: 375 CEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP 434 E+++ L+AIGNGT RETE F D ++ + A+ V+V+EAGAS+YSAS++A +EFP Sbjct: 374 VERNDCRLIAIGNGTGGRETEIFVRDALRK-AGIKAETVMVNEAGASIYSASDIAREEFP 432 Query: 435 DLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 +LD+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQHDV+QT L + LDAVVE CVN V Sbjct: 433 ELDLTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVNQTLLKKALDAVVESCVNFV 492 Query: 495 GVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFL 554 GVDLN+AS LL+ VAGL+ + IV RDE G F +RQ LLKV+R GPKAFEQ AGFL Sbjct: 493 GVDLNSASWALLSYVAGLSESQGRAIVRHRDEQGAFASRQSLLKVARFGPKAFEQAAGFL 552 Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 RI G+NPLD + VHPE Y VVE++ A +L L+ + ++ + + G+PT Sbjct: 553 RIRGGENPLDNTAVHPENYAVVEKMAADLGVSLSQLVADPGLSAGIRIERYVTDTIGIPT 612 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + DI+ EL+KPGRDPR +F++A F + V T+ DL+ GMIL+G VTNV FGAFVDIGVHQ Sbjct: 613 LRDILAELKKPGRDPREQFQSASFREDVVTIADLKEGMILQGVVTNVAAFGAFVDIGVHQ 672 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNA--R 731 DGLVH+S L+++F +DP+ VK G IVKVKVL D +RKRI+L+++ E + + NA R Sbjct: 673 DGLVHVSQLTHRFTKDPNDAVKVGQIVKVKVLSADPERKRISLSIKQAEPEKAQKNAEVR 732 Query: 732 RGGGNERPQNNRPAAKPRG 750 + E+P N + A + G Sbjct: 733 KPQPKEKPVNEQSAWEKAG 751 >UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacteria RepID=C4ZFN3_EUBR3 Length = 786 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/724 (48%), Positives = 479/724 (66%), Gaps = 29/724 (4%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E+Q + Q +AAV+L+DEGNT+PFIARYRKE TG L+D LRNL RL+YLR LE++ Sbjct: 7 IAEELQIKKGQAEAAVKLIDEGNTIPFIARYRKEATGSLNDEVLRNLFDRLTYLRNLEDK 66 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 +Q +L SI EQGKLTD+L KAI ++ ++DLY PY+PKRRTR IA E GLEPLA Sbjct: 67 KQTVLASIEEQGKLTDELKKAILEAQTQVAVDDLYRPYRPKRRTRATIAKEKGLEPLAQT 126 Query: 130 LWSDPSHTPEVA-AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 + + S +A AA+YV A+K VAD AAL GA+ I+ E +++A K+R+ + Sbjct: 127 ILAQESSVDIMAEAAKYVDAEKDVADEAAALAGAKDIIAENVSDNADYRTKIRELTMQKG 186 Query: 189 HLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 L+ST K E + + Y++ E LS V HR LA+ RG E +L + + E Sbjct: 187 RLISTAKDPKAE--SVYEMYYEFDEALSKVAGHRTLAINRGEKEKILTVKI-------EA 237 Query: 249 PKE---SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 P E Y ++ ++ + G AP + VV + + +E E+ + E AED Sbjct: 238 PTEDIIKYLKKQVITNDG-----APTAAVLTEVVEDAYNRLIAPAIEREIRNNLTEEAED 292 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ-- 363 AI VF +NL LLM P + +G DP RTG K++VVD TGK++ T IYP Q Sbjct: 293 GAIKVFGKNLEQLLMQPPIAGQVVLGWDPAFRTGCKISVVDPTGKVLDTTVIYPTAPQNK 352 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 +A + L +KH+V L+++GNGTASRE+E+ +++ K+ P V Q +IV+EAGASVY Sbjct: 353 VDEAKAIIKKLIDKHHVTLISLGNGTASRESEQVIVELLKEIP-VKVQYIIVNEAGASVY 411 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SAS+LA +EFP+ DV R A S+ARRLQDPLAELVKIDPKSIGVGQYQHD++Q +L+ L Sbjct: 412 SASKLATEEFPNFDVGQRSATSMARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSEAL 471 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVEDCVN VGVDLNTASV LL ++G+++ +A+NIV +R+ENG+F +R QLLKV++LG Sbjct: 472 GGVVEDCVNKVGVDLNTASVSLLEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAKLG 531 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD-----LMGNSSELR 598 PKAFEQCAGF+RI+ G NPLDA+ VHPE+Y + +L ++D ++G S ++ Sbjct: 532 PKAFEQCAGFMRISDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVGISKKVS 591 Query: 599 NLKASDFTDEK-FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 + KA DE G T+ DI+KELEKP RDPR + V M DL PGM+L+G Sbjct: 592 DYKA--LADEAGVGEITLRDIVKELEKPARDPREDMPKPILRSDVLEMKDLTPGMVLKGT 649 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V NV +FG FVDIGVHQDGLVHIS + +++++ P V GDIV V+V+ VDL+++RI L Sbjct: 650 VRNVIDFGCFVDIGVHQDGLVHISEICDRYIKHPLEAVSVGDIVDVQVMSVDLKKQRIQL 709 Query: 718 TMRL 721 TM++ Sbjct: 710 TMKI 713 >UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Bacteria RepID=D0LLY3_HALO1 Length = 801 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/745 (49%), Positives = 493/745 (66%), Gaps = 24/745 (3%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E+ E+V A V LL EGNTVPFIARYRKE+TGGLD+ Q+R +E R +YL ELEER Sbjct: 13 LAEELGLPAERVAAVVGLLSEGNTVPFIARYRKEVTGGLDEVQIRTIEERRTYLLELEER 72 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 RQ+IL SI EQGKLT +L + A +K ELEDLYLPYKPKRRTRG +A E GL PLA+ Sbjct: 73 RQSILSSIEEQGKLTGELRAKLLACTTKAELEDLYLPYKPKRRTRGMMARERGLLPLAER 132 Query: 130 LWSDPSH-TPEVAAAQYVYA------DKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 + + P+ P AA +V A D+ VAD AAL GAR I+ E AE+A + A VR Sbjct: 133 ILAQPAEGDPRAEAAAFVRAGDDVDKDQRVADADAALAGARDIVAEMTAENAEVRAFVRQ 192 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 LVS V+GK + KF Y++ E + T+P+HR LA+ RG EG+L+ + Sbjct: 193 SFADEGVLVSEAVAGKTDAPTKFEQYYEFSEAVKTIPAHRFLAIRRGEAEGILRARVELA 252 Query: 243 PQFDEPPKESYCEQIIMDH---LGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 P EP Q+ +D +++ A ADS+R+ + +E ++ + Sbjct: 253 P---EPVLMRIELQMGLDRSSPFSGQMSEAIADSYRRLLAP---------SVENDMRVEL 300 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 + R++ A++VFA N+ +LL+AAP G RA +G+DPGLRTG K A VD+TGK + T Y Sbjct: 301 KMRSDRAAVDVFADNVRNLLLAAPLGTRALIGVDPGLRTGCKCAAVDSTGKFLGHMTFYL 360 Query: 360 HTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 G+ A + A K + V +GNGT RET F ++ + +VSE Sbjct: 361 TKGERAVEQGRREFLAFLSKFDPVGVTVGNGTGGRETAAFVRQALREAGREELFVALVSE 420 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGASVYSAS++A +EFP+LD+++RGA+SIARRLQDPLAELVKI+PK+IGVGQYQHDV Q Sbjct: 421 AGASVYSASDVAREEFPELDLTIRGAISIARRLQDPLAELVKIEPKAIGVGQYQHDVHQP 480 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 LA+KL VVE CVN VGV+LNTAS PLL+ V+G+ + +A+ IV+ R++NG F+ R+QLL Sbjct: 481 LLAKKLGEVVESCVNHVGVELNTASAPLLSYVSGIGKSVAKKIVSHREQNGAFRTREQLL 540 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 VS LGPKAF+Q AGFLRI G+ LD+S VHPE Y +V RI A +++L+G+S Sbjct: 541 AVSGLGPKAFQQAAGFLRIRGGEQVLDSSAVHPERYDLVLRIAADLGVGIQELVGDSKLA 600 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 + + + + G PT+ DI+ EL+KPGRDPR EF+ +F D V T+ DL+P M LEG Sbjct: 601 ERIDIARYIGDGVGEPTLRDIVDELKKPGRDPRDEFEPPRFRDDVNTLEDLKPEMQLEGV 660 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VTNVT+FGAFVD+GVHQDGLVHIS LS++FV+DP VVK GD +KV+VL+VDL RKRIAL Sbjct: 661 VTNVTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVRVLDVDLARKRIAL 720 Query: 718 TMRLDEQPGETNARRGGGNERPQNN 742 + R D E RGG N++ ++ Sbjct: 721 SARSDGGRKEQERGRGGRNDQERSG 745 >UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular organisms RepID=B8D058_HALOH Length = 722 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 346/735 (47%), Positives = 465/735 (63%), Gaps = 28/735 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN I+ E++ + QV V+LLDEGNTVPFIARYRKE+TGGLD+ Q+R +E RL Sbjct: 1 MNQRIIGQISKELKLKTNQVKGTVKLLDEGNTVPFIARYRKEVTGGLDEAQIRTIEERLE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR L++R++ +++ I EQGKLT +L + I E+EDLY PYK KRRTR A E Sbjct: 61 YLRSLQKRKEEVIRLIEEQGKLTPELEEKIKKASILQEVEDLYRPYKQKRRTRATRAKEK 120 Query: 122 GLEPLADLLWSD--PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 GLEPLA L+W+ S PE +Y+ + + + GAR I+ E ++DA + + Sbjct: 121 GLEPLAKLMWTQELTSGNPEDIGKEYINPEVELESIEDVYQGARDIIAEWVSDDAGIRKE 180 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +R +K + ST + ++ K+ Y+D+ EP+S +P HR LA+ RG + VLQ+ + Sbjct: 181 IRKITFKQGVIQSTCKDSETDDEGKYEMYYDYREPVSKIPPHRVLAINRGEKDEVLQVKV 240 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWT---WRIKVLMHLETELM 296 A P+E E +I D R+ N P + ++ ++ + +E E+ Sbjct: 241 LA-------PEEDIIE-LIKD----RVVNNPESIFYNDIIEAIKDGYKRLIAPSIEREVR 288 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 ++ E+AE+ AIN+F++NL +LL+ P MG+DP RTG KV VVD TG+L+ T T Sbjct: 289 NSLTEKAEEHAINIFSKNLRNLLLQPPLRGHTVMGIDPAYRTGCKVCVVDPTGRLLDTAT 348 Query: 357 IYPHTGQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 IYPH Q+ +A V L ++ V +AIGNGTASRETE D+ K+ VI Sbjct: 349 IYPHPPQSRTGEAKKVVKGLINEYQVTTIAIGNGTASRETEFMVADIIKELKNTQVNYVI 408 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+EAGASVYSAS+LA +EFP+LDV++RGA+SIARRLQDPLAELVKIDPKSIGVG YQHDV Sbjct: 409 VNEAGASVYSASKLARKEFPELDVAMRGAISIARRLQDPLAELVKIDPKSIGVGLYQHDV 468 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +Q L + L VVE VN VGVDLNTAS LL VAG+ +A NIV +R+ENG+F+ R Sbjct: 469 NQKNLEKSLGNVVESAVNYVGVDLNTASPSLLKYVAGINSRVASNIVKYREENGKFETRD 528 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 +LLKV LG K F Q AGFLRI G NPLD + +HPE+Y + +L L D+ Sbjct: 529 ELLKVKGLGKKTFTQAAGFLRIPDGTNPLDNTPIHPESYQAAKGLLQDVGFKLLDITDKE 588 Query: 595 --SELR------NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 E+R N+K+ E G+PT+ DI+ L+KPGRDPR E F V M Sbjct: 589 KLKEVREELDSINIKSRAEKLET-GIPTLKDIVDALKKPGRDPRDELPKPIFRSDVLKME 647 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL+ GM+L+G V NV +FGAFVDIGV DGLVHIS +S+ +V+DP VV+ GD VKVK+L Sbjct: 648 DLEAGMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVDDPLKVVQVGDTVKVKIL 707 Query: 707 EVDLQRKRIALTMRL 721 EVD +R RI+L+M+L Sbjct: 708 EVDERRNRISLSMKL 722 >UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQS8_9FIRM Length = 733 Score = 601 bits (1549), Expect = e-170, Method: Compositional matrix adjust. Identities = 344/738 (46%), Positives = 456/738 (61%), Gaps = 31/738 (4%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ IA E++ +P QV+AA +LLDEGNTVPFIARYRKE TG L+D QLR LE RL Sbjct: 1 MLGKDIYPQIAVELKVQPHQVEAAAKLLDEGNTVPFIARYRKEATGSLEDEQLRELEERL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YLR L +R++ IL I EQGKLTDDL +AI T ELEDLYLPYK K+RTR QIA E Sbjct: 61 AYLRGLVKRQEEILAKIEEQGKLTDDLRRAIEKTRKLQELEDLYLPYKQKKRTRAQIARE 120 Query: 121 AGLEPLAD--LLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 GLEPLA+ LL SD +PE AA + DKGV T+ AL GA I+ E E+A + Sbjct: 121 RGLEPLANRMLLASDQKGSPEAIAAAFCQEDKGVEATEDALQGAMDIVAETVMEEAKIRQ 180 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGAK-FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 +R+++ K L + + EE + FR Y + EP+ +P HR LA+ RG G L++ Sbjct: 181 SMREHIAKTGSLQTELAKDAPEESQQVFRMYEAYEEPVHRLPPHRILAINRGEKLGCLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGV---VSWTWRIKVLMHLETE 294 +L D E C +I +L+ AP+ W K + + ++ +L L E Sbjct: 241 TLATD-------HEDNCRRI-----ERQLHRAPS-IWTKYLQLAIEDGYKRLLLPSLTRE 287 Query: 295 LMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV-- 352 + + E+AE AI++F NL LL+ AP MGLDPG R G K+AVVD TG+++ Sbjct: 288 IRTALTEKAEKHAIHLFGVNLRQLLLQAPLAGHTVMGLDPGYRNGCKMAVVDPTGRVLDY 347 Query: 353 ATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 I AA V K+ V L++IGNGTAS ETE+F + + Sbjct: 348 GVLQITQSDRAREAAAARVLTSIRKNGVTLLSIGNGTASYETEQFAAALIQDNHLKDVHY 407 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 +I +EAGASVYSAS+LA +E P+ DV +RGAVSIARR+QDPLAELVKIDP++IGVGQYQH Sbjct: 408 LITNEAGASVYSASKLAKEELPEYDVVIRGAVSIARRVQDPLAELVKIDPQAIGVGQYQH 467 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV+Q +LA LDA +E VN VGVDLNTAS LL +AG+ A+NI+A+R+E+G F + Sbjct: 468 DVNQKELASTLDATIESAVNHVGVDLNTASAALLRHIAGINATTAKNIIAYRNEHGVFTS 527 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R++LLKV RLGP AF QCAGFLRI+ +PLD + VHPE+Y + E+IL L+DL Sbjct: 528 RRELLKVPRLGPAAFTQCAGFLRIHGAKSPLDNTPVHPESYALAEKILQKLGFTLQDLRA 587 Query: 593 NSSELRNLKASDFTDEK----------FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 R DE+ G PTV DI+ L PGRDPR + + Sbjct: 588 PEQLERMKLKRRLLDERKERELAAALQAGTPTVHDILDALVSPGRDPRADLPAPLTRQAI 647 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +++L+PG IL G V N+T+FGAFVDIG+H+DGL+HIS L+ + V+ P VV G +++ Sbjct: 648 VKLSELKPGTILRGTVRNITDFGAFVDIGLHEDGLIHISELAKRRVKHPLEVVSIGQVLR 707 Query: 703 VKVLEVDLQRKRIALTMR 720 V V+ VD +R RI L+++ Sbjct: 708 VMVISVDEKRGRIGLSLK 725 >UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria RepID=D1BNV4_VEIPT Length = 770 Score = 593 bits (1529), Expect = e-168, Method: Compositional matrix adjust. Identities = 335/734 (45%), Positives = 460/734 (62%), Gaps = 33/734 (4%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ II E+ +P+QV AAV LLDEGNTVPFIARYRKE+TG L D QLR +E R+ Sbjct: 1 MSERMFAIIGSELNVKPKQVQAAVELLDEGNTVPFIARYRKEVTGELQDEQLRTIEERIK 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR LE RRQ I+ SI+EQ K+TD+L K++ A ELEDLYLPY+PK+RTR IA E Sbjct: 61 YLRNLETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPYRPKKRTRAMIARER 120 Query: 122 GLEPLADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 GLEPLAD++ +D S P A +Y+ + V + A+ GA I+ E ++ A A Sbjct: 121 GLEPLADMIINDTVTSGDPLEIAKEYITEE--VPTPEDAIQGASDIVAEIVSDSADFRAY 178 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +R +W N + +SG+EEE +F Y ++ EP+ +PSHR LA+ RG G L+L L Sbjct: 179 LRKKMW-NEGFIQAELSGEEEEQQQFLQYAEYAEPVRQMPSHRILAVNRGEKLGALKLVL 237 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPAD---SWRKGVVSWTWRIKVLMHLETELM 296 P ++Y ++ +L P ++ V+ ++ + LE E+ Sbjct: 238 TV-------PGDTYVAYMVQ-----KLEKNPKSIFADYKAAAVADAYKRLIFPALEREIR 285 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + E A+++AI VF NL +LL+ P MGLDPG RTG K+A++D G ++ Sbjct: 286 NELTENADEQAIKVFGVNLKNLLLQPPLAGHVIMGLDPGYRTGCKMAIIDQQGNVLDYGA 345 Query: 357 IYPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 Y + + A +A K V L++IGNGTAS ETE+F + ++ + +I Sbjct: 346 YYLTNSEKLRKEAQKVLADKIRKFKVTLLSIGNGTASYETEQFASTMIEE-ETLDCHYII 404 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 +EAGASVYSAS+LA E PDLDV++RGAVSIARR+QDPLAE VKIDPKSIGVGQYQHDV Sbjct: 405 TNEAGASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKIDPKSIGVGQYQHDV 464 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +Q QL LD VVE VN VGV+LNTAS +L VAG++ +A+NIVA+R ENG F++R+ Sbjct: 465 NQKQLTHTLDQVVETVVNHVGVELNTASPAILQHVAGISSAVAKNIVAYRQENGVFKSRK 524 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 +LLKV RLGP AF QCAGFLR+ HG NPLD ++VHPE+Y + ERI+ LKDL + Sbjct: 525 ELLKVPRLGPAAFTQCAGFLRLQHGKNPLDNTSVHPESYELAERIIGELGFTLKDLQ-DK 583 Query: 595 SELRNLKA------SDFTDEKF--GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 S+L L+ +D K GVPTV DI+ L KPGRDPR + V ++ Sbjct: 584 SQLEALQVKLPLVDADKMAAKLDAGVPTVRDILAALAKPGRDPREDLPAPLTRKHVVSLE 643 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D++ G +++G V NV +FGAFVD G+ +GL+H S L N + P V+ GDI++ +++ Sbjct: 644 DIKVGTVVKGTVHNVVDFGAFVDFGLKTNGLLHRSELCNSR-QHPSDVLAVGDIIEAQII 702 Query: 707 EVDLQRKRIALTMR 720 VD++R RI L+++ Sbjct: 703 SVDVKRNRIGLSVK 716 >UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria RepID=B1ZSU7_OPITP Length = 794 Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust. Identities = 351/734 (47%), Positives = 460/734 (62%), Gaps = 22/734 (2%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E+ + QV A +LL EG TVPFIARYRKE+TG LD+TQ+ + RL +L ++ER Sbjct: 12 LAQELNVKVFQVAATAQLLAEGATVPFIARYRKEVTGELDETQVLAIRDRLDHLTAVDER 71 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R AIL S+ E+ LT L +AI A + T LEDLYLP++PK+RTR IA E GLEPLA+L Sbjct: 72 RAAILSSLKERSLLTPALEQAIQAADTLTALEDLYLPFRPKKRTRATIAKEKGLEPLAEL 131 Query: 130 LWS-DPSHTPEVAAAQYV----YADKG------VADTKAALDGARYILMERFAEDAALLA 178 L++ DP+ AA YV AD G + AL GAR I+ ER ++D Sbjct: 132 LFAQDPATDAVAAAQAYVGREYVADDGKNQKSKIETVDEALAGARDIIAERISDDKDART 191 Query: 179 KVRDYLWKNAHLVSTVVSGKEE--EGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 ++R +A + S V+ GK+ E AK++DYF+ EPL+ PSHR LAM RG E L Sbjct: 192 RLRARYQSDAIVSSKVLIGKDADPEAAKYKDYFEWSEPLAKAPSHRILAMRRGEKESFLM 251 Query: 237 LSLNADPQF----DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLE 292 + + + + P ++ + LN+ +D + V R+ + +E Sbjct: 252 MRVTLPDETLAVAEVAPLFVKAARVAPNASSSTLNSTCSDQVQLAVADACKRL-LCPAME 310 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV 352 TE+ ++RA++ AI VF N+ +LL+A P G +A + +DPG RTG KV ++D GKL+ Sbjct: 311 TEMRLDSKKRADEAAIRVFTGNMRELLLAPPLGQKAVLAIDPGFRTGCKVVLLDRQGKLL 370 Query: 353 ATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 D ++P + +A +A + NVE +AIGNGTA RETE F V+K T Sbjct: 371 HNDVVFPDRHEQ-EARDKLAGFVQFFNVEAIAIGNGTAGRETEAF---VRKLGLPATIPI 426 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 V+V+E+GAS+YSASE+A +EFPD D+++RGAVSI RRL DPLAELVK+DPKSIGVGQYQH Sbjct: 427 VMVNESGASIYSASEVAREEFPDHDLTVRGAVSIGRRLMDPLAELVKLDPKSIGVGQYQH 486 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV Q L R LD V VN VGV+LNTAS LL+ V+GL A IVA R+E+G F++ Sbjct: 487 DVDQIALKRSLDDTVVSSVNGVGVELNTASKQLLSYVSGLNATTAAAIVARRNEHGPFKS 546 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R +L +V RLGPKAFEQ AGFLRI H +PLDAS VHPE Y +VE++ A + DLM Sbjct: 547 RAELKEVPRLGPKAFEQAAGFLRIRHATHPLDASAVHPERYALVEKMAADLGATVADLMR 606 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 LK + G+PT+ DI+ EL KPGRDPR +F+ F V DL+PGM Sbjct: 607 EGKLRAKLKLEAYVTADVGLPTLNDIMAELAKPGRDPREKFEAFAFDANVHEPKDLKPGM 666 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 L G VTNVT FGAFVDIGVHQDGLVHIS L++ FV+D TVVK V V V+EVDL R Sbjct: 667 KLPGIVTNVTAFGAFVDIGVHQDGLVHISQLADTFVKDAATVVKPQQKVTVTVVEVDLAR 726 Query: 713 KRIALTMRLDEQPG 726 RIAL+MR + + G Sbjct: 727 NRIALSMRSNPEIG 740 >UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NGU9_9LACT Length = 751 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 327/723 (45%), Positives = 447/723 (61%), Gaps = 39/723 (5%) Query: 15 QARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAIL 74 Q +P+Q+D + LL +GNTVPFIARYRK+ TG LD+ Q+R +E R YL E+R++ I Sbjct: 42 QYKPKQIDTVLGLLQDGNTVPFIARYRKDQTGSLDEVQIREIEERQRYLENFEKRKEEIS 101 Query: 75 KSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDP 134 + I EQGKLT ++ A++ + T LED+Y PYK KRRT+ IA EAGLEP A L Sbjct: 102 RLIDEQGKLTPEITAALSKATTLTALEDIYRPYKQKRRTKATIAKEAGLEPFALWLLMTT 161 Query: 135 SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV 194 + E AA ++ +KG+ + A++GA I+ E +++A ++R + KN + S V Sbjct: 162 KDSVEEKAATFINEEKGILTVEDAINGAVEIIAEWISDEAKYRKQLRQFTQKNGVVKSVV 221 Query: 195 VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYC 254 + +E + Y+D+ EP+ ++ HR LA+ R E V+++++ D P + Sbjct: 222 KKEELDEKKVYEMYYDYEEPVKSIVPHRVLALNRAEKEDVVRVTIEVD--VTNPLTKIKE 279 Query: 255 EQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARN 314 E+I + ++P+ +G + +++ + +E E+ + E+A+ +AI +F N Sbjct: 280 EKI-------KNPSSPSAPIVEGAIEESYKRFIGPAIEREIRNELSEKAQTQAIAIFGEN 332 Query: 315 LHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA----AKAAMT 370 L +LL+ AP + +GLDP RTG K+AV+D TGK++ IYPH G + A+A Sbjct: 333 LKNLLLQAPMKGQVILGLDPAYRTGCKLAVIDETGKVLGKSVIYPHVGASEAKRAQAGGQ 392 Query: 371 VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAA 430 + E++ V LVAIGNGTASRE+E+F + +Q P+ IVSEAGASVYSAS++A Sbjct: 393 FRRIVEQYGVTLVAIGNGTASRESEQFVAEQLRQIPRKVVY-TIVSEAGASVYSASDIAR 451 Query: 431 QEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDC 490 QEFPD V R AVSIARRLQDPLAELVKIDPK++GVGQYQHDV + QL +LD VVE Sbjct: 452 QEFPDYQVEERSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDVPEKQLDEQLDFVVETA 511 Query: 491 VNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC 550 VN VGV++NTAS LL +AGLT+ A N+V +RDENG+F NR QL KV RLGPKA+EQ Sbjct: 512 VNKVGVNVNTASAALLEHIAGLTKTTAANVVTFRDENGKFTNRTQLKKVPRLGPKAYEQA 571 Query: 551 AGFLRINHGDNPLDASTVHPEAYPVVERILAAT------------QQALKDLMGNSSELR 598 GFLRI G NP D + +HPE+Y V IL ++ALK L N+ EL+ Sbjct: 572 VGFLRIIDGTNPFDGTDIHPESYDVAIAILKKANAEKLALGSPELEEALKGL--NTKELK 629 Query: 599 NLKASDFTDEKFGV--PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 E+FG+ T+ ++ L KPGRDPR E V M DLQ GM LEG Sbjct: 630 ---------EEFGIGQETLELVMDGLLKPGRDPREEVAGPILRSDVLKMEDLQVGMELEG 680 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 V NV +FGAFVDIGV QDGLVHIS L FV+ P VV GDIV V V E+DL++ R+ Sbjct: 681 TVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVTVWVTELDLKKGRVG 740 Query: 717 LTM 719 L+M Sbjct: 741 LSM 743 >UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacteriaceae RepID=C2M5J9_CAPGI Length = 723 Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust. Identities = 325/725 (44%), Positives = 455/725 (62%), Gaps = 22/725 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M N F I ++ + ++ + LL EG T+PFIARYRK+ TG LD+ + + Sbjct: 17 MTNIQF---IKAQVSTTEKAIENTLTLLSEGCTIPFIARYRKDRTGNLDEVAIEKIAKAQ 73 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 + + +R++ IL S+ EQGKLT++L K I A+ TELEDLYLPYK KR+T+G +A E Sbjct: 74 ADYENICKRKETILSSVEEQGKLTEELRKRIEASYELTELEDLYLPYKKKRKTKGDVAKE 133 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLA L S E A +Y+ +DK VA + AL GA I+ E E+ + + Sbjct: 134 NGLEPLAKQLMSQRVTDMEQLALRYL-SDK-VATVEDALQGASDIIAEWINENMYVRRTL 191 Query: 181 RDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 R + A L + V GKE EE K+ YFD EPLS PSHR LAM R EG ++L Sbjct: 192 RRVFQRKAQLCTEVAKGKENDEEAQKYAQYFDWSEPLSKAPSHRVLAMLRAEKEGFVRLK 251 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + + + P + E+ I ++ N AD +K + R+ + + E + Sbjct: 252 VQVETEDTLP----FIEETI-----IKGNGQTADFLKKAIKDSYKRL-LEPSISNETLQE 301 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 V+++A+ +AI VF+ NL LL+++P G + + +DPG RTG KV +D G L+ +TI+ Sbjct: 302 VKDKADAKAIEVFSDNLSQLLLSSPLGEKRILAIDPGFRTGCKVVCLDEKGDLLHNETIF 361 Query: 359 PHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH Q A A + + E++ +E ++IGNGTASRETERF ++ FP Q +VS Sbjct: 362 PHAPQHETAMAMKKIRTMVEQYRIEAISIGNGTASRETERFIKEIS--FPH-PLQVFVVS 418 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS++A +EFP DV++RGAVSI RRL DPLAELVKI+PKSIGVGQYQHDV+Q Sbjct: 419 EAGASVYSASKIAREEFPTYDVTVRGAVSIGRRLSDPLAELVKIEPKSIGVGQYQHDVNQ 478 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 T L ++LDA V CVN VGV+LNTAS LL+ V+G+ MA+NIVA+R NG F+ R+ L Sbjct: 479 TLLEQELDATVIRCVNKVGVNLNTASGSLLSYVSGIGEKMAENIVAYRSTNGAFRRREDL 538 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 KV RLG K ++Q FLR+++ +NPLD S VHPEAYP+++++ +++ L+GN Sbjct: 539 KKVPRLGDKVYQQAVAFLRVHNSENPLDNSAVHPEAYPIIKQMAKDLGISVEKLIGNKQA 598 Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 + + + +E+ G + D++KELEKPG DPR K +F V+T +D++ GMIL G Sbjct: 599 ISTIDIKKYKNEEVGELYLKDVLKELEKPGLDPRKTAKVFEFDPNVKTFDDVRVGMILPG 658 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 V N+T FG FVDIG+ + GLVHIS L + +V + VVK + V+VKV EVD RKRI+ Sbjct: 659 IVNNITAFGCFVDIGIKESGLVHISQLKDGYVSEVSEVVKLHEQVQVKVTEVDTARKRIS 718 Query: 717 LTMRL 721 L+M L Sbjct: 719 LSMIL 723 >UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria RepID=A7GKE9_BACCN Length = 722 Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust. Identities = 318/727 (43%), Positives = 449/727 (61%), Gaps = 31/727 (4%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +++ E+ +Q+ ++L +EGNTVPFIARYRKE TG LD+ Q+R + R Y+ + Sbjct: 10 LMKMLVKELGFTEKQIRHVIQLTEEGNTVPFIARYRKEWTGSLDEVQIRAILDRWQYVMQ 69 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LEER++ +++ I E+GKLT++L + I A E+EDLY PYK KRRT+ IA E GLEP Sbjct: 70 LEERKEEVIRLIEEKGKLTEELHQQIIAATKLQEVEDLYRPYKEKRRTKATIAKEKGLEP 129 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ L P A ++ +K V + AL GA+ I+ E ++DA+ +R+ + Sbjct: 130 LAEWLLLFSKEEPLFKAKSFINTEKKVDSAEDALQGAQDIIAEMISDDASYRTWIRNVTF 189 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K + S+V +++E + Y+ + E + + HR LAM RG E +L++S+ Sbjct: 190 KKGMISSSVKDEEKDEKNIYEMYYGYEEAIQKIVPHRVLAMNRGEKEEILKVSIV----- 244 Query: 246 DEPPKESYC----EQIIMDHL---GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 PP E +++I D + + A D +++ + +E E+ Sbjct: 245 --PPVEEVLRFLHKKVICDESSKSAMYVQLALEDGYKRLIQP---------SIEREIRKE 293 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E AE++AI++FA NL +LL+ P + + +DP RTG K+AVVD TGK++ D IY Sbjct: 294 LTEVAEEQAIHIFAENLRNLLLQPPMKGKVVLAVDPAYRTGCKLAVVDDTGKVLHIDVIY 353 Query: 359 PH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH + A V ++ ++ V+++AIGNGTASRETE F +D + K +IV+ Sbjct: 354 PHPPVKKYDDAKQKVLSIINQYKVQMIAIGNGTASRETEEFIVDALQDV-KQDVFYMIVN 412 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS+LA +EFPDL V R AVSI RRLQDPLAELVKIDPKS+GVGQYQHDVSQ Sbjct: 413 EAGASVYSASDLAREEFPDLQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVSQ 472 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 +L L VVE VN VGV++NTASVPLL V+GL++ +A+NIV R+ENG+F NR +L Sbjct: 473 KRLNESLTFVVETAVNQVGVNVNTASVPLLQYVSGLSKTVAKNIVVKREENGKFTNRAEL 532 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 K+ RLG K +EQC GFLRI G+NPLD +++HPE Y VE +L ++D+ G Sbjct: 533 KKIPRLGAKTYEQCIGFLRILEGENPLDRTSIHPEQYKNVELLLNKIGLTIQDV-GTPEL 591 Query: 597 LRNLKASDF----TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 + L+ D ++ G PT+ DII L P RD R E G+ + DL+ GM Sbjct: 592 QKRLEGVDVSKLSSETNIGEPTLMDIIDALISPERDLRDELPKPLLKKGILKLEDLKRGM 651 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 LEG V NV +FGAF+DIGV QDGLVHIS LS +FV+ P +V G IVKV V +VD+++ Sbjct: 652 ELEGTVRNVVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVKVWVDDVDMKK 711 Query: 713 KRIALTM 719 R+AL+M Sbjct: 712 GRVALSM 718 >UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia mucilaginosa RepID=D2NPD4_9MICC Length = 854 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 352/796 (44%), Positives = 476/796 (59%), Gaps = 82/796 (10%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E P ++ AAV LLD N+VPFIARYRKE TG L DTQLR +++RL LR LEER Sbjct: 59 LAVETGIAPHRIRAAVALLDADNSVPFIARYRKEATGALTDTQLRTIQSRLGQLRALEER 118 Query: 70 RQAILKSISEQGK--LTDDL------AKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 R +L++++E+ L D L + +NA + ++ +Y PY+ +R TR +A A Sbjct: 119 RNRVLEALTERADEGLIDPLTLLQLRSSLMNAA-TIADVNAIYAPYRSERVTRAHLARAA 177 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVY------------------ADKG--VADTKAALDG 161 GL+ L + L P AA Y+ AD+ + + ALDG Sbjct: 178 GLDSLVEDLLEVPLAEAHAIAAAYITDGTEDDEDDEDEGIEAAEADEALQIHSAEEALDG 237 Query: 162 ARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSH 221 AR IL++R D L K+ L ++ + S V++G+E GAKF DYF + + ++P H Sbjct: 238 ARAILIDRALTDPVLSEKLLKRLRESGVIESRVIAGQESTGAKFSDYFAFSDRIRSIPPH 297 Query: 222 RALAMFRGRNEGVLQLSLNADP--------------------QFDEPPKESYCEQIIMD- 260 R LA+ R ++ GV++L ++ P + E + +Y ++ Sbjct: 298 RVLALHRAKDAGVVRLKVDVAPAPVALSRLRGAARAEAEAAAENYENVRSAYEREVAAAL 357 Query: 261 HLGLRLNNAPAD-----SWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNL 315 + +++ N D W V WR + L + + + A A VFA NL Sbjct: 358 RIPVQVLNTVDDEDRVLGWLAATVRTAWRSHLRPRLAERIRHQLLDAAAQHATEVFASNL 417 Query: 316 HDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT--GQAAKAAMTVAA 373 D+L+AAPAG + T+GLDPGLR GVK AVVD TG+ + T+YPH Q A+A +A Sbjct: 418 RDILLAAPAGHKTTLGLDPGLRHGVKYAVVDGTGEPLRVGTVYPHAPRNQWAEALRELAV 477 Query: 374 LCEKHNVELVAIGNGTASRETERFYLDVQKQFPK--VTA-QKVIVSEAGASVYSASELAA 430 C +H VEL+AIGNGTASRET++ ++ + + V A QKV VSEAGASVYSAS LAA Sbjct: 478 ACREHGVELIAIGNGTASRETDKLASELIRTLREEGVDAPQKVTVSEAGASVYSASALAA 537 Query: 431 QEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDC 490 E PD DV++RGAVSIARRLQDPLAELVKIDP+SIGVGQYQHDV L R L+ VEDC Sbjct: 538 AELPDYDVTVRGAVSIARRLQDPLAELVKIDPQSIGVGQYQHDVPPAALRRALNDTVEDC 597 Query: 491 VNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC 550 VNAVGV+LN+ASV LL VAG+ A+ I+A+R E+G F NRQQLL V RLG K F Q Sbjct: 598 VNAVGVNLNSASVQLLAHVAGVGTATAERIIAYRTEHGLFTNRQQLLNVPRLGAKTFRQA 657 Query: 551 AGFLRINHGDNPLDASTVHPEAYPVVERILAATQ-----QALKDLMGN---SSELRNLKA 602 AGF+RI G+ PLDAS VHPEAYP+ RI+A Q + +G S L L Sbjct: 658 AGFIRIRGGEEPLDASAVHPEAYPLARRIIADAQARNGAHWVAGALGTSDGSDPLAGLNP 717 Query: 603 SDFT--------------DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDL 648 +D+ + GV TV DI EL +PG DPR F+TA+F++ V D+ Sbjct: 718 ADYVQGSDTQVDAQMSADEAAAGVYTVEDIFTELRRPGLDPRGSFRTARFSESVSHFGDV 777 Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 +PGM+LEG V+NV FGAFVDIGVHQDGLVHIS +S +V +PH +V++GDIV+V+V+EV Sbjct: 778 RPGMVLEGTVSNVAAFGAFVDIGVHQDGLVHISQMSRGYVANPHDIVRSGDIVRVRVVEV 837 Query: 709 DLQRKRIALTMRLDEQ 724 D R+RI+L++ ++++ Sbjct: 838 DPARRRISLSLLVEDE 853 >UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular organisms RepID=C5D4D6_GEOSW Length = 728 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 342/731 (46%), Positives = 465/731 (63%), Gaps = 27/731 (3%) Query: 1 MMN-DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 M+N ++ +IA E+ +QV + L +EGNTVPFIARYRKE+TG LD+ Q+R++ + Sbjct: 1 MLNREALMDLIANELHLSTKQVSNVISLSEEGNTVPFIARYRKEMTGALDEVQIRDILEK 60 Query: 60 LSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAI 119 +YL+ LE+R++ +L+ I EQGKLTDDL AI ++EDLY PY+ KRRT+ IA Sbjct: 61 WNYLQNLEQRKEEVLRLIDEQGKLTDDLKNAIINATKLQQVEDLYRPYRQKRRTKATIAK 120 Query: 120 EAGLEPLADLLWSDPSHT-PEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 E GLEPLA+ LW+ P PE A +++ +K V + AL GA+ I+ E+ ++DA Sbjct: 121 EKGLEPLAEWLWTCPMRPRPEEKAQEFIQPEKEVRTVEEALQGAKDIIAEKVSDDAQFRQ 180 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 +R + WK ++STV + +E + Y+++ EP+ + HR LA+ RG EGVL++S Sbjct: 181 WIRQHTWKKGVIISTVKESENDEKKVYEMYYEYEEPVHRIVPHRVLALNRGEKEGVLRVS 240 Query: 239 LNADPQFDEPPKE---SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 + A P E +Y ++ I+ + +PA S + ++ + +E ++ Sbjct: 241 IQA-------PVEDIMTYLQKHIITN-----PQSPAASLLSEAIEDGYKRLIEPSIERDI 288 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 + E+AE+ AI++FA NL LL+ P + +G+DP RTG K+AVVD TGKL+ D Sbjct: 289 RNELTEKAEERAIHIFAENLRKLLLQPPLKGKIVLGIDPAYRTGCKLAVVDETGKLLKID 348 Query: 356 TIYPH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 IYPH Q +A + + E+++VE++AIGNGTASRETE+F D KQ K + Sbjct: 349 VIYPHPPQQQIEEAREKLIRIIEEYHVEMIAIGNGTASRETEQFVADTLKQVDKEIFY-L 407 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 IV+EAGASVYSAS+LA QEFPDL V R AVSIARR+QDPLAELVKIDPKS+GVGQYQHD Sbjct: 408 IVNEAGASVYSASDLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHD 467 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 VSQ +LA+ L VVE VN VGV++NTASV LL V+GLT+ +++NIV R+E G+F+NR Sbjct: 468 VSQKKLAQSLQFVVETVVNQVGVNVNTASVSLLQYVSGLTKTVSENIVKRREEQGKFKNR 527 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 ++L + RLG K +EQC GFLRI GD PLD + +HPE Y V+R+L Q Sbjct: 528 EELKSIPRLGAKTYEQCIGFLRIIDGDEPLDRTPIHPERYEEVKRLLH--QIGFTTEHIG 585 Query: 594 SSELR----NLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDL 648 S ELR +L D E G T+ DII L +P RDPR E + M DL Sbjct: 586 SEELRQALQSLSIPDTAAELGIGELTLQDIIDALIRPERDPRDELPKPLLRKDILKMEDL 645 Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 + GM LEG V NV +FGAFVDIGV QDGLVHIS LS ++V P VV GD+VKV V V Sbjct: 646 KRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQYVRHPLDVVSVGDVVKVWVDNV 705 Query: 709 DLQRKRIALTM 719 DL + RI+L+M Sbjct: 706 DLDKGRISLSM 716 >UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacteriaceae RepID=D1AUZ7_STRM9 Length = 762 Score = 564 bits (1453), Expect = e-159, Method: Compositional matrix adjust. Identities = 306/733 (41%), Positives = 468/733 (63%), Gaps = 25/733 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M + + ++ E+ +Q++ ++L DEG T+PFI+RYRKE+TG LD+ Q+R++ +++ Sbjct: 1 MENKIFKYVSKELNIGLKQIEETMKLYDEGATIPFISRYRKEVTGNLDEEQIRDVVEKIT 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y R LE+R++ +++ I EQG LT +L K+IN +EDLY+PYK K++T+ IAIE Sbjct: 61 YYRNLEKRKEEVIRLIEEQGALTPELEKSINEATVLQRVEDLYMPYKKKKKTKADIAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQ-YVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLA + D T ++ + Y + + + AL+G I ++ +E+ + Sbjct: 121 GLEPLA-IFAKDEKITIDILKEEANKYINDNILSVEDALEGVHLIHAQKISEEITNREYL 179 Query: 181 RDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 R+ L + + +VS ++ + +E ++DY++ E S + +HR LA+ RG NE +L+++ Sbjct: 180 RNLLSQKSLVVSKLIEKNKGLDEKQVYKDYYNFQEAYSKIVTHRILAINRGENEKILKVN 239 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH--LETELM 296 L + D+ +E + M H+ + +N S+ +V+ + I LM+ +E EL Sbjct: 240 L----EIDDNVREELVNK--MYHMNFKNDNLK--SFFIDIVNDS--IDRLMYPSIENELR 289 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + E+AE EAI FA NL LL+ P + +GLDPG RTG K+A++D G +D Sbjct: 290 NILTEKAELEAIENFATNLEKLLLQPPLNKKTILGLDPGYRTGAKLAIIDKDGFFKESDV 349 Query: 357 IY----PHT-GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQ 411 +Y H+ Q A + K++V++VAIGNGTASRETE F + K++ + Sbjct: 350 VYLVKEMHSEKQLETARNKILKYLSKYDVDIVAIGNGTASRETESFVAALLKEYKEKKVS 409 Query: 412 KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ 471 +IV+EAGASVYSAS++AA EFP+LDV++RG +SI+RRLQDPLAELVKIDPKSIGVG YQ Sbjct: 410 YIIVNEAGASVYSASKVAADEFPELDVTVRGTISISRRLQDPLAELVKIDPKSIGVGMYQ 469 Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQ 531 HDV+Q +L +L+ +E VN VGV++NTAS LL+ V+G+ + +A+NIV +R ENG F+ Sbjct: 470 HDVNQKKLNEELEQTIEKIVNRVGVNINTASAELLSFVSGIKKNIAKNIVEYRKENGDFK 529 Query: 532 NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 NR+++LKV LG KAFEQ AGF+ I +G+NPLD + +HPE+Y + E IL+++ + +L Sbjct: 530 NRKEILKVKGLGAKAFEQLAGFVVIPNGENPLDNTIIHPESYHIAEEILSSSSTNVNELK 589 Query: 592 GNSSELR-NLKASDFTD--EKFGV-PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 + +R LK + + EK G+ T D+ + L K RDPR EF + + ++ D Sbjct: 590 TDLELVREKLKLVNLQNIIEKTGLDKTTKDVYEALIKDRRDPRDEFDKPLLREDILSIED 649 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ GM LEG V NVT FGAFVDIG+ D ++HIS LSN F++DP V+ G I+KV+VL+ Sbjct: 650 LKVGMELEGTVRNVTKFGAFVDIGLKNDAMIHISELSNSFIDDPTKVLSIGQIIKVRVLD 709 Query: 708 VDLQRKRIALTMR 720 +D+QR R+ LT + Sbjct: 710 IDIQRGRVGLTRK 722 >UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHM7_PETMO Length = 720 Score = 555 bits (1430), Expect = e-156, Method: Compositional matrix adjust. Identities = 311/738 (42%), Positives = 435/738 (58%), Gaps = 49/738 (6%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + I ++ + Q + V LL+EGNTVPFI+RYRKE TG LD+ ++R +E Y + Sbjct: 3 IIKTITEDLNIKLFQTENTVELLNEGNTVPFISRYRKERTGNLDEEKIRRIEELFKYYQN 62 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LE ++ +LKSI +QGKLTD L + I T TELEDLYLPYK +++T AIEAGLEP Sbjct: 63 LEGYKKTVLKSIEDQGKLTDALKEKIINTKKMTELEDLYLPYKKRKKTNADKAIEAGLEP 122 Query: 126 LAD--LLWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 A+ LL + S E + +Y DK +G YI+ + FA D +R Sbjct: 123 AANKVLLGNIKSLDELEEFVSEEYDNIDK-------VTEGISYIIGQTFAHDKENRESLR 175 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + K + S EE K+ Y + + +S +P++R LA+ RG E VL + L Sbjct: 176 KHYEKFGKIHSEKKKEFVEEATKYDMYHEFTQEISKIPNYRVLALNRGEKEKVLNVKLII 235 Query: 242 DPQFDEPPKESY------CEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 D ++ E K Y C++II L N S +E E+ Sbjct: 236 DDEWLEKEKSRYKTGNEICDKIISKGLIYGFTNMLNPS-----------------IEREI 278 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 + E+AE+ AI +FA+NL LL+ P + + +DPG RTG KV +D G +A D Sbjct: 279 RQNLTEKAEEGAIVLFAKNLRQLLLTPPLKNKRVLAIDPGFRTGCKVVALDEMGNFLAND 338 Query: 356 TIYPHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 TI+P Q + + L +K+NV L+AIGNGTASRET++F +D+ K+ K+ + + Sbjct: 339 TIFPVPPQNDIENSEKIMMGLIQKYNVNLIAIGNGTASRETQQFVVDLIKK-NKLNLKYI 397 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 V E+GASVYSAS+LA +EFP+ DV++RGA+S+ RR+QDPLAE VKIDPKSIGVGQYQHD Sbjct: 398 FVDESGASVYSASKLAKEEFPEYDVTVRGAISLGRRIQDPLAEFVKIDPKSIGVGQYQHD 457 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 V+Q +L KLDA VE VN VGV+LNTAS LL V+G+T +A+ IV +R +NG F R Sbjct: 458 VNQKKLKEKLDATVESVVNLVGVNLNTASYSLLEYVSGITSSLAKKIVQYRQKNGSFNKR 517 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL-MG 592 LL V G KAFEQ AGFLRI G+NPL+ + +HPE+Y E+++ L DL + Sbjct: 518 ADLLNVKGFGEKAFEQSAGFLRIIDGENPLEITGIHPESYEAAEKLINIHGYRLDDLKIK 577 Query: 593 NSSELRNLKASDFTDEK-----------FGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 + LK S +EK G T+ DI+KEL+KPGRDPR E Q D Sbjct: 578 EKLDPLKLKVSQLLNEKENLKSISEELEIGEYTLIDILKELQKPGRDPRDEMPQPQLMDD 637 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + DL+ M L G +TN+T+FGAFVD+G+ ++GL+H S+L+ +FV P +V+ DIV Sbjct: 638 ILKFEDLKESMRLSGKITNITDFGAFVDLGIKENGLIHKSNLAERFVAHPTDIVQINDIV 697 Query: 702 KVKVLEVDLQRKRIALTM 719 +V+++ +D R+RI L + Sbjct: 698 EVEIINIDKTRRRIGLRL 715 >UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2 Tax=Planctomyces RepID=A6C5P8_9PLAN Length = 828 Score = 551 bits (1421), Expect = e-155, Method: Compositional matrix adjust. Identities = 314/784 (40%), Positives = 456/784 (58%), Gaps = 42/784 (5%) Query: 3 NDSFCRI-------IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRN 55 NDS R IA E+ +Q+ + LLDEGNTVPFI RYRKE TG LD+ Q+R+ Sbjct: 9 NDSSARFSERDAEQIASELNLTSQQILNVIALLDEGNTVPFITRYRKERTGNLDEVQIRD 68 Query: 56 LETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRG 115 ++ R+ R++ ER IL+ I Q +LT +L I + LEDLY PY+PKR +R Sbjct: 69 IQKRVQSKRQIWERASTILRLIEAQQQLTPELKAEIEKADTLKRLEDLYRPYRPKRTSRA 128 Query: 116 QIAIEAGLEPLADLLWSDPSHTPEV--AAAQYVYADKGVADTKAALDGARYILMERFAED 173 A + G EPLA+ +W+ + + AA QY A+ G T+ L GA IL+E+ ED Sbjct: 129 ATARKHGFEPLANAIWAGDASIDNLTNAALQYTKAEDGARTTEDVLKGAADILVEKIGED 188 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 + R W++ L EE G ++RDYF++ E + VP HR +A+ RG G Sbjct: 189 PDVREISRKIAWRSGKLTVNATKKAEESGQEYRDYFNYSEQVVKVPHHRTMALNRGEKSG 248 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 L++ E +S C I L LN + V++ + L+ Sbjct: 249 ALRVRF-------EWADDSACMSIARH---LNLNGHRFHEFLTEVINDALSRLIQPSLDR 298 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 E+ + E+AE A++VFA+NL +LL+ P + + +DPGLRTG K+AV+D G VA Sbjct: 299 EIRRELTEKAEKHAVSVFAQNLKNLLLQPPLQGQRILAIDPGLRTGCKLAVLDELGYCVA 358 Query: 354 TDTIYPHTGQAAKAAMTVAALCE---KHNVELVAIGNGTASRETERFYLD-VQKQFPKVT 409 TD +Y TG A K L E +H +LVAIGNGTA RETE + +++ P+ Sbjct: 359 TDLVYV-TGSADKKEFARKKLAEVMTEHQCQLVAIGNGTACRETEEIITEMIEQDLPQ-- 415 Query: 410 AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQ 469 A+ +IV+EAGAS+YSAS +A +EFPDLD ++RG +SI RRLQDPL+ELVKIDP+ +GVG Sbjct: 416 ARYLIVNEAGASIYSASPVAREEFPDLDATIRGTISIGRRLQDPLSELVKIDPQHLGVGM 475 Query: 470 YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQ 529 YQHDV+ +L LD V+E CVN VGV+LNTAS LL V+G+ +++A+ I WR+++G Sbjct: 476 YQHDVNSKRLKESLDEVIESCVNYVGVNLNTASASLLRHVSGMNQLIARRITEWREKHGS 535 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 FQNR+QLL V+ +G F Q AGFL+I+ G PLD++ +HPE+Y ++ + Sbjct: 536 FQNRKQLLDVAGVGEATFTQAAGFLKIDQGSEPLDSTWIHPESYEHAYKVFEQLELPPDS 595 Query: 590 LMGNSSELRNL--------KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 L ++ + ++ K + K G+PT+ DI++ + +P RDPR + F G Sbjct: 596 LKSSAQDRASIIEKVGQIDKGGLSKNLKIGLPTLEDILEAIVRPRRDPRADLPGPIFKQG 655 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 V + L GM L+G V NV +FGAFVD+G+ L+H+S ++N F+E+P+ V GD++ Sbjct: 656 VLKLEQLTEGMELQGTVLNVVDFGAFVDVGLKDSALIHVSEMANHFIENPYQFVSVGDVI 715 Query: 702 KVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP-RGREAQPAGNSA 760 VL VDL+R+R++LT+ +PG R+ +RP +PA KP + A+PA SA Sbjct: 716 TAWVLGVDLERRRVSLTLI---RPG--TDRQPKKAQRP--TKPAEKPASAKTAKPATASA 768 Query: 761 MMDA 764 A Sbjct: 769 KKTA 772 >UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6S4_NATTJ Length = 727 Score = 548 bits (1412), Expect = e-154, Method: Compositional matrix adjust. Identities = 311/737 (42%), Positives = 452/737 (61%), Gaps = 34/737 (4%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDE-GNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ + ++ E +V A+ L+ E GNTVPF+ARYRK TG L + +LR++ R Sbjct: 1 MDQKILKQVSQEENFPESKVAKAINLIKEAGNTVPFVARYRKNETGNLSEDELRSIVERW 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 YL L++R+ I+ ++ ++ KLT +L +AI + + ELE+LY PYK K++TRG A E Sbjct: 61 DYLVNLQDRKAEIIATLEKREKLTPELKEAIQKSETMQELEELYKPYKQKKKTRGMKAKE 120 Query: 121 AGLEPLADLLWSDPSHTP---EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALL 177 GLEPLA+ L T E A+ ++ ++GV T AL GA+ I+ E+ +E Sbjct: 121 KGLEPLANKLRQGELKTEAEAESTASDFIDDEQGVNSTDEALQGAQDIIAEQISETVDNR 180 Query: 178 AKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 V++ +L + + ++E ++DY+D+ E L +P HRA+A+ RG EGVL++ Sbjct: 181 RDVKEIAAPETYLETQLKDQAQDENKVYQDYYDYRENLKKMPLHRAMAINRGEKEGVLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNA--PADSWRKGVVSWTWRIKVLMHLETEL 295 SL++ P+E +++ + L + L NA + + V R+ ++ ++ EL Sbjct: 241 SLSS-------PEERIIDKVALREL-VSLENAGFSRELVFEAVKDACKRL-IIPSIQREL 291 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 + E+AE+ AI +F++NL LLM P + MG+DP ++G K+AVVD G + D Sbjct: 292 RTSKTEQAEEHAIKIFSQNLERLLMQPPIKGKNVMGIDPAYKSGCKIAVVDYKGDMQEVD 351 Query: 356 TIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFP-KVTAQK 412 IYP + +AA V +L K+ VE++AIGNGTASRETE F + + + Q Sbjct: 352 VIYPTPPFNKTEQAAKKVISLLNKYQVEIIAIGNGTASRETEEFVSETIEDVELSLEVQY 411 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 IVSE GASVYSAS+LAA+EFP+LDV R A+SIARR+ DPLAELVKIDPKSIGVGQYQH Sbjct: 412 AIVSEDGASVYSASKLAAEEFPELDVQERSAISIARRVIDPLAELVKIDPKSIGVGQYQH 471 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV Q++L + VVE VN VGVD+NTASV LL ++GL + A+N+V R E G F + Sbjct: 472 DVPQSKLKEAVQFVVEKVVNQVGVDVNTASVHLLRYISGLNKKSAENMVNTRSELGGFDS 531 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILA----------- 581 R QL +V LG K FEQCAGFLRI G NPLD + +HPE+Y + E I+A Sbjct: 532 RAQLTEVKGLGAKTFEQCAGFLRILDGSNPLDKTAIHPESYHIAEGIIAHLNEVPENIGS 591 Query: 582 -ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 A + + L+ N +++++L +F +K+ T+ DI+ L+KP DPR EF + Sbjct: 592 EALRTGVDSLLNNKNQIQSL-CQEFDTDKY---TLEDILTGLKKPLYDPREEFDKPRLKK 647 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 V + DL GMILEG + NV +FGAFVD+G+ +DGL+HIS+LS KFV+ P +V GD+ Sbjct: 648 DVMKLEDLSEGMILEGEIRNVVDFGAFVDLGIKEDGLIHISNLSEKFVKHPMEIVSVGDV 707 Query: 701 VKVKVLEVDLQRKRIAL 717 V+V+++ +D R RI L Sbjct: 708 VQVEIVSIDKDRGRIGL 724 >UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular organisms RepID=YDCI_BACSU Length = 719 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 312/722 (43%), Positives = 457/722 (63%), Gaps = 27/722 (3%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA EI + V++ +RLL++GNTVPFIARYRKE TG +D+ Q++ + R Y++ L +R Sbjct: 11 IAKEIGLSQKHVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQTISERWQYIQNLNQR 70 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 ++ +++ I+EQ KLTD+L + I ++ E+EDLY PYK KR+T+ +A GLEPLAD Sbjct: 71 KEEVIRLIAEQDKLTDNLKRKIEQSVKLQEVEDLYRPYKQKRKTKATVAKSKGLEPLADY 130 Query: 130 LWSDPSHTPEVAAA-QYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 + + P A A QY+ +K V + A++GA++I+ E+ +++ +R +K Sbjct: 131 ILTLPQDDHLAATADQYISEEKEVFTREEAIEGAKHIIAEQISDEPTFRKWIRQETFKRG 190 Query: 189 HLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 + S S +E + Y+++ EP++ V HR LAM RG E +L++++ E Sbjct: 191 TIKSAAGKSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVAI-------E 243 Query: 248 PPKE---SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 PP + +Y E+ I+ + + ++ + +++ + +E E+ + E+A+ Sbjct: 244 PPADHIKAYLEKQIIKNRSTSVREILQET-----IEDSYKRLIQPAIEREIRKELSEKAD 298 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH--TG 362 ++AI++F+ NL LL+ P + +G+DP RTG K+AV D TGK++ D IYPH Sbjct: 299 EQAIHIFSENLRKLLLQPPMKGKTVLGVDPAFRTGCKLAVSDETGKVLKIDVIYPHAPVN 358 Query: 363 QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + +A V + E++ VE+VAIGNGTASRETE+F ++V + P+ VIV+EAGASV Sbjct: 359 KTKEAHEKVKKILEQYQVEMVAIGNGTASRETEQFIVNVLRDMPR-KIYYVIVNEAGASV 417 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSASELA +EFPDL V R AVSIARRLQDPLAELVKIDPKS+GVGQYQHDVSQ +L Sbjct: 418 YSASELAREEFPDLKVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNES 477 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L VVE VN VGV++NTAS LL VAGL++ +A N+V R+E G+F NR++L + RL Sbjct: 478 LRFVVETVVNQVGVNVNTASAALLQYVAGLSKSVAGNVVKKREEIGKFSNRKELKDIPRL 537 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR---N 599 G K +EQC GFLR+ G PLD + +HPE+Y + +L + + + ++EL+ N Sbjct: 538 GAKTYEQCIGFLRVQEGTEPLDRTGIHPESYKETKALLKKLGLSTEHI--GTAELKDKIN 595 Query: 600 LKASDFTDEKFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 A T ++ G+ +T DI ++L +P RDPR + V + DL+ GM L+G Sbjct: 596 QLALSETAKELGIGEITLKDICEQLTRPERDPRDKVPKPLLKTDVLQLEDLKEGMELQGT 655 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V NV +FGAFVDIGV QDGLVHIS LSN+FV+ P VV GDIV V V VD+Q+ R++L Sbjct: 656 VRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVDGVDVQKGRVSL 715 Query: 718 TM 719 +M Sbjct: 716 SM 717 >UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria RepID=C1CRY7_STRZT Length = 709 Score = 535 bits (1377), Expect = e-150, Method: Compositional matrix adjust. Identities = 324/727 (44%), Positives = 445/727 (61%), Gaps = 32/727 (4%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 I+ ++ +Q+D + L EG T+PFIARYRK++TG LD+ ++ + L L +R Sbjct: 8 ISQDLGVTLKQIDTVLSLTAEGATIPFIARYRKDMTGSLDEVAIKAIIDLDKSLTNLNDR 67 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 ++A+L I EQGKLT +L +AI ++E+LYLPYK KRRT+ IA EAGL PLA L Sbjct: 68 KEAVLAKIQEQGKLTKELEEAILVAEKLADVEELYLPYKEKRRTKATIAREAGLFPLARL 127 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 + + E A ++V +G A K AL GA IL+E +ED L + + +++ Sbjct: 128 ILQNIVDL-EKEAEKFVC--EGFATGKEALTGAVDILVEALSEDVTLRSMTYQEVLRHSK 184 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 L S +E F+ Y+D E + T+ +R LA+ RG GVL++ Sbjct: 185 LTSQAKDESLDEKQVFQIYYDFSETVGTMQGYRTLALNRGEKLGVLKIGF---------- 234 Query: 250 KESYCEQII-MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAI 308 E ++I+ ++ NA D VV + + KVL +E + + E+AE+ AI Sbjct: 235 -EHATDRILAFFATRFKVKNAYIDE----VVQQSVKKKVLPAIERRIRTELTEKAEEGAI 289 Query: 309 NVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP----HTGQA 364 +F+ NL +LL+ AP R +G DP RTG K+AVVDATGK++ T IYP Q Sbjct: 290 QLFSDNLRNLLLVAPLKGRVVLGFDPAFRTGAKLAVVDATGKMLTTQVIYPVKPASARQI 349 Query: 365 AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYS 424 +A +A L ++ VE++AIGNGTASRE+E F +V K FP+V+ VIV+E+GASVYS Sbjct: 350 EEAKKDLADLIGQYGVEIIAIGNGTASRESEAFVAEVLKDFPEVSY--VIVNESGASVYS 407 Query: 425 ASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLD 484 ASELA QEFPDL V R A+SIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ +L+ LD Sbjct: 408 ASELARQEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSESLD 467 Query: 485 AVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGP 544 VV+ VN VGV++NTAS LL+ VAGL + +++NIV +R+E G+ +R Q+ KV RLG Sbjct: 468 FVVDTVVNQVGVNVNTASPALLSHVAGLNKTISENIVKYREEEGKITSRSQIKKVPRLGA 527 Query: 545 KAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS-SELRNLKAS 603 KAFEQ AGFLRI N LD + VHPE Y V+ + +KDL + S+L++L Sbjct: 528 KAFEQAAGFLRIPESSNILDNTGVHPENYAAVKELFKCLD--IKDLNEEAQSKLKSLSVK 585 Query: 604 DFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 + E G T+ DII +L KPGRD R F V + DL G LEG V NV Sbjct: 586 EMAQELDLGPETLKDIIADLLKPGRDFRDSFDAPVLRQDVLDIKDLVVGQKLEGVVRNVV 645 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 +FGAFVDIG+H+DGL+HIS +S KF++ P VV GD+V V V ++D +R+++ L++ Sbjct: 646 DFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVAVGDLVSVWVKKIDTEREKVNLSLL-- 703 Query: 723 EQPGETN 729 P ET+ Sbjct: 704 -APNETD 709 >UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPA5_BDEBA Length = 780 Score = 533 bits (1372), Expect = e-149, Method: Compositional matrix adjust. Identities = 338/769 (43%), Positives = 468/769 (60%), Gaps = 33/769 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 S+ IA + A+ Q A + L EG TVPFIARYRKE TG LD+ Q+R + Sbjct: 7 SYLARIAPTVSAKSAQ--AVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGHETYN 64 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 E+ +R+ ++K I EQ LT ++ K I + ELE++Y P+K K++T+ IA EAGLE Sbjct: 65 EIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIAREAGLE 124 Query: 125 PLADLLWSDPSH-------TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALL 177 PLA+ +W D H T E+ A ++ +A + AL GA+ I++E+ A DA L Sbjct: 125 PLANWIW-DMGHGTIKDDQTMEMKAKNFLNPTAKIATYEEALKGAQDIIVEKIANDAELR 183 Query: 178 AKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV----PSHRALAMFRGRNEG 233 A V + +V+ G + +K+ Y + EP+ + +HR LAM RG E Sbjct: 184 AMVAKNYNDSGRVVAKAAKGYKA-NSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQEE 242 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 L + + D DE +SY ++ + + K + VL + Sbjct: 243 ELTVDVKGD---DEAILKSY------ENFATSTPDNAIGDYLKQCARLALNVYVLPSVVN 293 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 E+ ++E+A+ +AI VFA N+ LL+A+P G + +G+DPGLRTG KVA++D +G ++ Sbjct: 294 EVHRQLKEKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGAFIS 353 Query: 354 TDTIYPHTGQA-AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 +Y A KA + + ++ +E +A+GNGTA RETE F V K K Sbjct: 354 HTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLKKVLKDLGK-NIPV 412 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 V+VSE+GASVYSASE+A +EFPDLDV+++GA+SIARRLQDPLAELVK+DPKSIGVGQYQH Sbjct: 413 VMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQH 472 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV+Q+QL + L+AVVE CVN VGVD+NTAS LL+ VAG+ +A+ IV R ++ F + Sbjct: 473 DVNQSQLKKSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKS-LFND 531 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R +LLKV + K FEQ AGFLRI LD++ +HPE Y V + +L D++G Sbjct: 532 RTELLKVPKFSAKVFEQAAGFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTDVIG 591 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 ++ + S + + G T DI+KELEKPGRDPR FK QF D + + DL GM Sbjct: 592 EGAKKLVSQRSKWA-QLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLTEGM 650 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I G VTNVTNFGAFVDIGVHQDGLVHIS+LS+KFV+DP VV GD V VKVL+VD+ + Sbjct: 651 ICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVK 710 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGR-EAQPAGNSA 760 +I+LTM++D+ P E +A RG ER NR A++P G+ + PAG A Sbjct: 711 NQISLTMKMDDAP-EASAPRG---ERRPENRGASRPMGQGQRPPAGKPA 755 >UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobacterium RepID=C4L139_EXISA Length = 709 Score = 528 bits (1361), Expect = e-148, Method: Compositional matrix adjust. Identities = 302/718 (42%), Positives = 431/718 (60%), Gaps = 27/718 (3%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A + + QV+ +L EG T+PF+ARYRKE+TG LD+ +++ + L Y L++R Sbjct: 5 VANALNLKVNQVETVQQLASEGATIPFMARYRKEMTGNLDEVEIKGILDALQYEESLQKR 64 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 + +L + E K T +L KA+ A + ++ED+YLPY+PKRRT+ + E GL+PLAD Sbjct: 65 KADVLAKLEELEKNTPELTKALEAATTLQQVEDIYLPYRPKRRTKAEQGREKGLQPLAD- 123 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 W + + + D + + AL I+ E + E+A L +RD + K Sbjct: 124 -WFRDKSPYSLDEVKELSQD---VEVEEALPLVHAIIGEEWGEEAKLRQMLRDRVRKEGL 179 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 L S E+E F Y+++ E ++ + HR LA+ RG VLQ+ + D Sbjct: 180 LRSKKKKQAEDEKEIFAQYYEYEEKIAGIVPHRVLALNRGERTDVLQVKVVFD------- 232 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWR--KGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 E MD P + + V+ ++ V +E E+ G + E+AE++A Sbjct: 233 -----ESRFMDQALRTYERLPKEKREVVEAAVTEAYKKSVFPAIEREIRGELTEKAEEQA 287 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AA 365 I+VF++NL L M P +G+DP RTG K AVV+ GK+ YP + A Sbjct: 288 IDVFSKNLKQLYMQPPLREVVVLGIDPAYRTGCKWAVVNEIGKVEEVGVFYPTAPKHDIA 347 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA 425 A + L +K+ + ++ +GNGTASRETE+F D K+ + A IV+EAGASVYSA Sbjct: 348 GAEKVLTRLAKKYPISVIVVGNGTASRETEQFVADWLKKAERDIAY-AIVNEAGASVYSA 406 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 SE+A EFPDL V R AVSIARR+QD +AELVK+DP+S+GVGQYQHDVSQ +L L+ Sbjct: 407 SEVARSEFPDLKVEERSAVSIARRIQDAMAELVKVDPQSVGVGQYQHDVSQNKLKASLEF 466 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VVE VN VG+D+N AS LLT V+GL + A+NIVA+R+ENG+F+ R+++ KV RLG K Sbjct: 467 VVESVVNMVGIDVNRASESLLTYVSGLNKTTAKNIVAYREENGRFETRKEIKKVPRLGAK 526 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS---ELRNLKA 602 AFEQ AGFLRI +G + LD + +HPE+YP+ IL + K +G ++ L+ + A Sbjct: 527 AFEQAAGFLRIMNGKDVLDQTEIHPESYPLALSILKEIGSS-KSEVGTAALRERLQQVDA 585 Query: 603 SDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 +++ + G+PTV DI+K L KPGRDPR + + V ++ DLQ GM +G V NV Sbjct: 586 KALSEQLEAGLPTVEDILKSLAKPGRDPREDIQKPLLRTDVMSLEDLQVGMEFQGTVRNV 645 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +FGAFVDIGV QDGLVHIS LSN++V+ P VV GDIV V + +VD+ R RI+LTM Sbjct: 646 IDFGAFVDIGVKQDGLVHISKLSNRYVKHPLDVVAVGDIVTVWIEQVDVNRGRISLTM 703 >UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacilli RepID=B1MZ34_LEUCK Length = 733 Score = 520 bits (1338), Expect = e-145, Method: Compositional matrix adjust. Identities = 307/717 (42%), Positives = 421/717 (58%), Gaps = 36/717 (5%) Query: 19 EQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS 78 +Q A + LL +G TVPFI+RYRKE+TGGLD+ Q+ +++ ++++L +R++ +LK+I+ Sbjct: 30 KQTTATLELLRDGATVPFISRYRKEMTGGLDEVQIHDVQVTARHIKDLTDRKKTVLKAIA 89 Query: 79 EQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTP 138 Q KLT L AI + ++EDLYLPYK K+RT+ IA E GL+PLAD + + S Sbjct: 90 TQQKLTATLQAAIITAATLQDVEDLYLPYKQKKRTKAMIARENGLQPLADFVLTHLSEEI 149 Query: 139 EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK 198 A Y + +AD A L G I+ E+ E A +R+ + ++ L TV Sbjct: 150 PTEA----YINDALADAAAVLAGLHEIIAEQIGEKAIYRQWLRERMQRDGFLTVTVKRDG 205 Query: 199 EEEGAK--FRDYFDHHEPLSTVP--SHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYC 254 EE+ A+ + Y+D+ E L ++ + R LA+ RG +GVL + ++ + Sbjct: 206 EEKDAQGVYAQYYDYSESLKSLQMNTFRILAVNRGEKDGVLSVKID------------FS 253 Query: 255 EQIIMDHLGLRLNNAPADSWRK-----GVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 E+ + + ++ N DS + ++ + + EL + A+ +AI Sbjct: 254 EERMRHFIQIKERNGQGDSGEGYQVLLSAIDDAYKRFIQPAVARELRQELTVLAQGQAIK 313 Query: 310 VFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT----GQAA 365 VF NL+ LLM AP + MG DPG RTG K+A++DA G+ + + IYPH Q Sbjct: 314 VFGDNLYHLLMQAPLKNKIVMGFDPGFRTGSKLAIIDANGRFLKKEVIYPHKPASEKQRQ 373 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA 425 +AA +L + +V LVAIGNGTASRE++ F V P Q IV+EAGASVYSA Sbjct: 374 EAAKRFQSLIHEFDVALVAIGNGTASRESQEF---VANNLPS-GVQYSIVNEAGASVYSA 429 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 SE A EFP L V R A+SI RR+QDPLAEL+KIDPKS+GVGQYQHD++ L ++ Sbjct: 430 SEEARSEFPQLHVEERSAISIGRRIQDPLAELIKIDPKSVGVGQYQHDLNTKMLDEQVGQ 489 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VVE VN VGV+LNTAS PLLT +AGL +AQNIV +RD NG F +R L K+ RLGPK Sbjct: 490 VVEKAVNQVGVNLNTASTPLLTHIAGLNTTLAQNIVDYRDNNGVFTSRIDLKKIPRLGPK 549 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERIL---AATQQALKDLMGNSSELRNLKA 602 A+EQ AGFLRI G N LD + +HPE+Y +++L T Q L N R Sbjct: 550 AYEQAAGFLRILDGKNILDNTDIHPESYAAAKKLLDLADITAQQLATAPANERLTRYDNQ 609 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 G+ T+ DI+ L+KPGRD R E A V + DLQPGM L+G V NV Sbjct: 610 MTANQLGIGIETLHDIVGSLKKPGRDGRSEMVGALLKSDVLHIEDLQPGMKLQGTVRNVV 669 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +FGAFVD+GV DGLVHIS L + V+ P +V GDIV V V+EVD +R+RI LTM Sbjct: 670 DFGAFVDLGVKHDGLVHISRLVKRRVKHPSEIVSVGDIVNVWVVEVDQKRQRIGLTM 726 >UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ4_9BACT Length = 706 Score = 516 bits (1329), Expect = e-144, Method: Compositional matrix adjust. Identities = 309/720 (42%), Positives = 425/720 (59%), Gaps = 32/720 (4%) Query: 13 EIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQA 72 E + ++ + L GNTVPFIARYRKE+TG +D +RN+ R YL LE+R+Q Sbjct: 8 EFSFQRNHINNVIDLHLSGNTVPFIARYRKEMTGNMDAEDIRNIIERYEYLENLEKRKQE 67 Query: 73 ILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWS 132 ++++I E+GKLTD+L K+I + E+EDLY PYK K++T+ +A EAGLEPLA + + Sbjct: 68 VIEAIDERGKLTDELKKSIMKAETMKEVEDLYAPYKSKKKTKADLAREAGLEPLAVYIRA 127 Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 + A A+ D V D A+ A I+ E D + A++R+ N +S Sbjct: 128 NADLGGLSAEAEKFVCD-AVPDADTAVSMASDIVTEEIGHDPEIKARLRELYELNGE-IS 185 Query: 193 TVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES 252 ++ +E + DY+D + + VP HR LAMFRG E +L+L + D E Sbjct: 186 SIQKTDSKERNPYEDYYDFRQKMRDVPPHRVLAMFRGEREKILKLKIEID--------ED 237 Query: 253 YCEQIIMDHL---GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 C I G+ N S R+ ++ + + LE E G ++E+ E +AI+ Sbjct: 238 MCLNAIAKICAGKGMEDNEITKKSMRQA-----FKKMLELSLELEFRGELKEKGEIKAIS 292 Query: 310 VFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA--AKA 367 VFA NL +LL+ R MG+DP RTG K AVVD TG L+ +YP QA K+ Sbjct: 293 VFAENLKNLLLTPTVRNRVIMGIDPAFRTGCKFAVVDTTGDLLDYGVMYPTKPQADYQKS 352 Query: 368 AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASE 427 + K++V +AIGNGTASRETE F V + ++ Q IVSEAGASVYSA Sbjct: 353 RSIMLESIRKNSVNAIAIGNGTASRETEEFVASVISE-DELDIQYTIVSEAGASVYSAGA 411 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 +A +EFP+LDVS+RGA+SIARR+ DPLAELVKIDPKSIGVG YQHDV+ +L + L VV Sbjct: 412 VAKREFPELDVSIRGAISIARRVLDPLAELVKIDPKSIGVGMYQHDVTGKKLEKSLTDVV 471 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 ED VN VGVDLNTAS LL+ V+GL+ +A+ IV R G+F++R++L+KV +G F Sbjct: 472 EDVVNNVGVDLNTASPSLLSYVSGLSDSLAEKIVKHRQSIGRFKSRKELMKVDGVGELTF 531 Query: 548 EQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT- 606 Q AGFL++ G LD+ +HPE+Y V L A +L + EL L D Sbjct: 532 RQSAGFLKVYGGGEKLDSMFIHPESYDAVYAFLEAV-----NLSSDKCELVKLAVKDKNV 586 Query: 607 ---DEKFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 EK G+ T+ DII LEKP RD R F G+ ++ L+ G +L G V+NV Sbjct: 587 KSLAEKLGIGEFTIKDIIDNLEKPDRDIRDNVDPVVFKQGILSIESLKEGDVLTGKVSNV 646 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 +FGAFVD+G+ DGLVHIS L+++FV DP VVK G VK KVL VD +R R++L+M++ Sbjct: 647 VDFGAFVDVGLKNDGLVHISQLADRFVSDPSEVVKVGQTVKTKVLSVDRERGRLSLSMKV 706 >UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2BIJ8_9FIRM Length = 697 Score = 511 bits (1317), Expect = e-143, Method: Compositional matrix adjust. Identities = 305/727 (41%), Positives = 435/727 (59%), Gaps = 47/727 (6%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 I++ E+ E+++ ++LLDEG+TV FIARYRKE+TG L D ++R +E L LR Sbjct: 3 IIEILSKELNINEERIENVIKLLDEGSTVAFIARYRKEVTGNLTDVEIREIEKNLGRLRN 62 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 +E+R++ I+K I E+G+LTD+L + I A+ S T LED+Y PYK +R+TR IA E GLE Sbjct: 63 IEKRQEEIIKLIDEKGQLTDELREEILASNSLTILEDIYAPYKSRRKTRADIARELGLEE 122 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 L ++ S E A Y +G+ D K + + IL AED A R+ + Sbjct: 123 FLTKLLTEISSEDEALQAAVSYIKEGLEDEKDVISRSLDIL----AEDIANTIDARNIIR 178 Query: 186 KNAHL-VSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 ++ L S + S K EE + + Y D + L + S + LA+ R E +L N + Sbjct: 179 RDGFLRASLITSLKAEEDSSYESYHDFSKKLKDLKSFQILAINRAEKEDIL----NVKIE 234 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWT----WRIKVLMHLETELMGTVR 300 F + +S +++ D G N ++K +V+ T ++ ++ + TEL + Sbjct: 235 FSDAYNKSLIYKLVSD--GKNFN-----PYQKELVNLTIDDAYKRLMVPSITTELRNKLT 287 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP- 359 E A DE+I VF NL L+ P + MGLDPG RTG KVAVVD GK + IYP Sbjct: 288 EEASDESIRVFGNNLKPYLLQRPLKGQVVMGLDPGFRTGCKVAVVDKNGKYLDQAVIYPV 347 Query: 360 --HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 H + +A T+ AL +K+ V L+A+GN TASRETE + K+ V+ IV+E Sbjct: 348 EPHKKEK-EAIATLKALIKKYGVTLIALGNATASRETELVVDKLIKEVDGVSY--AIVNE 404 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGASVYSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IGVGQYQHD+ Sbjct: 405 AGASVYSASSLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGVGQYQHDLDSK 464 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 +L +L VVED VN VGV +N AS LL+ V+GL + +A+ I E G+ R+ LL Sbjct: 465 KLDEELSKVVEDAVNEVGVAINNASYKLLSYVSGLNQNLAKRIEEDFKE-GKLVYRKDLL 523 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 V LG K +E AGFLR LD + VHPE+Y + ++I +DL +L Sbjct: 524 DVKGLGKKTYELAAGFLRFPSSPEILDNTAVHPESYKIAKKI--------QDL-----DL 570 Query: 598 RNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPR---PEFKTAQFADGVETMNDLQPGMI 653 + +E + G+PT+ DII EL+KPGRDPR PE T + G+ +DL+ GM+ Sbjct: 571 DKIDIEKVAEELEVGIPTLKDIIAELKKPGRDPREDNPEVLTKKEIMGI---DDLKVGMV 627 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 L+G V N+T+FGAFVDIGV DGLVH+S +S+KFV++PH + +V V+++E+D +++ Sbjct: 628 LKGKVRNITDFGAFVDIGVGIDGLVHVSEISDKFVKNPHDELTNSQVVSVRIIEIDKKKE 687 Query: 714 RIALTMR 720 RI L+MR Sbjct: 688 RIGLSMR 694 >UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP5_9FIRM Length = 749 Score = 510 bits (1314), Expect = e-143, Method: Compositional matrix adjust. Identities = 295/755 (39%), Positives = 440/755 (58%), Gaps = 41/755 (5%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ + IA E+ + +QV+ + LL EGNTVPFIARYRKE T GLD+ Q+ + Sbjct: 1 MNEQIIQNIAKELNIQLDQVEHTLSLLQEGNTVPFIARYRKEATKGLDEEQILFIRKHFD 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y +L ER++A+LK I+EQGKLT +L K + A +++ED+Y PY K++TR A++ Sbjct: 61 YQNKLAERKEAVLKLIAEQGKLTPELEKEVQACEKLSQVEDIYRPYAQKKKTRATEAVKK 120 Query: 122 GLEPLADLLWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+PLAD L P + E A ++V + V + + AL GAR I+ E ++ A + Sbjct: 121 GLQPLADWLLGLPIEGSIEEMAEKFV--NDQVTNVEEALQGARDIIAEFVSDKAKQRWRF 178 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 ++++ + + + + ++E + Y+D E ++ V HR +A+ R E V+ +SL Sbjct: 179 KEFILTSGQIQTKLKKDAQDEKHTYEMYYDRIEKINHVADHRIMAIDRAEKEKVITVSLV 238 Query: 241 ADPQFDEPPKESYC---EQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 D + E E+ I +L A D + + +E E+ Sbjct: 239 YDKEHLEQEALEELLKGEKTIAQE---QLAFASKDGCERLLFP---------SIEREIRS 286 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTI 357 + ERA+ ++I +F+ NL LL AP R +G DPG G K+AV+D TGK++A I Sbjct: 287 DLSERAQGKSIEIFSMNLEKLLSQAPLKGRVVLGFDPGFFNGCKLAVIDETGKMLAVQKI 346 Query: 358 YPHTGQAAKAAMT---VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 +P + + + ++ + L +++ V++VAIGNGTASRE+E+ DV ++ ++ I Sbjct: 347 FPFSKKGEELEVSKKKLWQLIQRYQVQIVAIGNGTASRESEKLVADVIRE-NQLDISYAI 405 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 VSEAGASV+SA E A EFPDL V R AVSI RRL DPLAEL+KIDP+SIGVGQYQHD+ Sbjct: 406 VSEAGASVWSAQEEARAEFPDLAVEERSAVSIGRRLLDPLAELIKIDPQSIGVGQYQHDL 465 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 Q +L +L+ VN G DLNTAS LLT ++GL +AQ IV +R+ENG+F NR Sbjct: 466 PQKKLTERLEEATMKVVNRTGADLNTASKELLTHISGLNAGIAQEIVKYRNENGRFTNRN 525 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAA---TQQALKDLM 591 QLLKV +LGPKA+ Q AGFLRI G+ PLD +++HPE+Y +++ A TQ K++ Sbjct: 526 QLLKVKKLGPKAYTQSAGFLRIKGGEEPLDQTSIHPESYEAARQVMEAYGITQLGQKEVT 585 Query: 592 GNSSELRNLKASDFTDEKFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 + S+ D+ G+ T+ DI + + +P RD R +F A V ++ DL Sbjct: 586 MDGSK----------DQLLGIDAYTLKDIKEAIRQPLRDYRDQFDGALLKSDVLSLEDLH 635 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G L G V NV +FGAF+DIG+H+DGL HIS ++ K P ++ GDIV V V E+D Sbjct: 636 VGDQLSGTVRNVVDFGAFIDIGLHEDGLAHISHMAMKKFNHPSEILSVGDIVTVWVYEID 695 Query: 710 LQRKRIALTM----RLDEQPGETNARRGGGNERPQ 740 + R R+ L++ +L E+ + R+ N + + Sbjct: 696 INRNRVQLSLLPLEKLKEREAQVKYRKSAKNRKSK 730 >UniRef50_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding domain) n=14 Tax=Bacteria RepID=A9NHV1_ACHLI Length = 724 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 298/736 (40%), Positives = 438/736 (59%), Gaps = 35/736 (4%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ ++ E++ +V + LL +G T+PFIARYRKE+TGG+D+ Q+ + Sbjct: 1 MNEQLVMSVSKELKLPTAKVKVVLELLADGATIPFIARYRKEMTGGMDEEQIFAINQMFE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y L +R++ +++ I E+G LT++L I + E+EDLY PYK K++T+ AI Sbjct: 61 YANNLFKRKEDVIRLIDEKGMLTEELKNEILSATKLVEVEDLYRPYKEKKKTKATEAIAK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA L + P +V Y + V TK AL+GA +I+ E ++DA +R Sbjct: 121 GLEPLAKFLLTFPK--TDVVEEAKKYLNDEVLTTKDALEGAGFIISELISDDANYRKYLR 178 Query: 182 DYLWKNAHLVSTVVSGKEEEGAK--FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 DYL+++ LVS + +E K + Y+D+ + ++ + H+ LA+ R +E V+ + L Sbjct: 179 DYLFRHGVLVSNLRKNGKELDVKGVYEIYYDYSQSITKIKPHQILAINRAEDEKVITVKL 238 Query: 240 NADPQFDEPPKESY-CEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + + E+Y +Q+I + AD + + + + + + +E E+ Sbjct: 239 DGTKE----AMENYLIKQVIK-------KPSNADMYLEEAIKDSLKRLIFPSIEREIRSE 287 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E+ +++AI VFA NL LL+ P + +G+DP RTG K VVD TG+++ IY Sbjct: 288 LSEKGQEQAIEVFADNLSKLLLQPPLKGKVILGIDPAFRTGCKWTVVDQTGQVLEKGVIY 347 Query: 359 PH-TGQAAK--------AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT 409 PH T Q + A + + L +K+ ELVAIGNGTASRETERF ++V K + Sbjct: 348 PHETTQGGRPDPEKVFQAELQLKVLYKKYKFELVAIGNGTASRETERFVVEVIKN-QNMD 406 Query: 410 AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQ 469 A+ VIV+EAGASVYSAS++A +EFPD V R A SIARRLQDPL+ELVKIDPKSIGVGQ Sbjct: 407 AKYVIVNEAGASVYSASDVAREEFPDFSVEERSAASIARRLQDPLSELVKIDPKSIGVGQ 466 Query: 470 YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQ 529 YQHD++ +L L+ VV VN VGV+ NTAS LLT V+GL++ +A+N+V +R++ G Sbjct: 467 YQHDIAPKKLDDSLNFVVTQVVNQVGVNANTASKSLLTYVSGLSKNVAENLVNYRNKIGG 526 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 F++R+ LLKV LGPK +EQ GFLRI D LD +++HPE+Y + ++ + +D Sbjct: 527 FKSREDLLKVPSLGPKTYEQAVGFLRIPESDEILDQTSIHPESYQLAREVMKKLNISSED 586 Query: 590 LMGNSSEL------RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 + S L R A + +K+ T+ I+ P RDPR ++ V Sbjct: 587 IGKPSIRLWTDNIDREQVARELHTDKY---TLDLILDAFVAPMRDPRDDYAQPILKSDVL 643 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 ++ DL+ GM LEG V NVT+FGAFVD+G+ DGLVHIS LSNKFV+ P VV G IV V Sbjct: 644 SIEDLKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVTV 703 Query: 704 KVLEVDLQRKRIALTM 719 VL +D + ++ LTM Sbjct: 704 WVLNIDRDKGQVGLTM 719 >UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococcus RepID=C7RH14_ANAPD Length = 699 Score = 507 bits (1305), Expect = e-142, Method: Compositional matrix adjust. Identities = 307/727 (42%), Positives = 440/727 (60%), Gaps = 45/727 (6%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I++ +++ + ++A +LLDEG+TV FIARYRKE TG L D ++R +E L+ R Sbjct: 2 NITEILSKQLEISEKGIEAVTKLLDEGSTVAFIARYRKEATGNLTDVEIREIEKNLNKYR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +E+R++ I+ SI QGKLT++L + I +T + T LED+Y PYK KR+TR IA E GL+ Sbjct: 62 NIEKRQEEIINSIESQGKLTEELKEEILSTNTLTILEDIYAPYKSKRKTRADIAREFGLD 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L D L++ + E Y +G+ + ALD A IL AED + R+ + Sbjct: 122 KLLDFLFTKAENEGEALDEASKYLVEGLESEEEALDRALDIL----AEDISNSIPARNII 177 Query: 185 WKNAHLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 ++ L + + S KE+E + +Y+D + L + S + LA+ RG E L + L Sbjct: 178 RRDGFLRAKLTCSLKEDEAGLYENYYDFSKKLRDMKSFQTLAINRGEKEKALTVKL---- 233 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAP-ADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 +F + Y +++I D + P +S V+ ++ +L + TE+ + E Sbjct: 234 EF----TDEYNKKLIADLFREDKDFNPYQESLLVKTVNDAYKRLMLPSITTEMRNFLTES 289 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP--- 359 AEDE+I+VF +NL L+ P +A +GLDPG RTG KVAVVD GK + + IYP Sbjct: 290 AEDESISVFGKNLKPYLLQRPIKGQAVIGLDPGFRTGCKVAVVDQFGKYLDSTVIYPVEP 349 Query: 360 HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA-QKVIVSEA 418 H + +A T+ L +K++V L+A+GN TASRETE L V K +V IV+EA Sbjct: 350 HKKEK-EAIATLKRLVKKYDVSLIALGNATASRETE---LVVNKLIQEVDGLSYAIVNEA 405 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IG+GQYQHD+ + Sbjct: 406 GASVYSASTLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGIGQYQHDLDGKK 465 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L +L VVED VN VGV +N AS LL+ V+GL +A+ I E G+ R+ L Sbjct: 466 LDEELSKVVEDAVNEVGVSINNASYKLLSYVSGLNANLAKRIEEDFKE-GKIVYRKDLKS 524 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V LG K ++ CAGFLR LD + VHPE+Y + K L G + Sbjct: 525 VKGLGDKTYKLCAGFLRFPDSPELLDNTAVHPESYKIA-----------KKLEGEDLDSI 573 Query: 599 NLKASDFTDEKF--GVPTVTDIIKELEKPGRDPR---PEFKTAQFADGVETMNDLQPGMI 653 NL++ EK GVPT+ DII EL+KPGRDPR PE T + G+ +DL+ GMI Sbjct: 574 NLES---LAEKLEVGVPTLEDIISELKKPGRDPRDDNPEVLTRKEVMGI---DDLKEGMI 627 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 L+G V N+T+FGAFVDIGV DGLVH+S +SNKF+++P+ V+ +V+VKV+E+D +++ Sbjct: 628 LKGKVRNITDFGAFVDIGVGIDGLVHVSKISNKFIKNPNEVLTNSQVVEVKVIEIDRKKE 687 Query: 714 RIALTMR 720 RI L+M+ Sbjct: 688 RIGLSMK 694 >UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFG9_MYCFE Length = 722 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 275/724 (37%), Positives = 424/724 (58%), Gaps = 35/724 (4%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + +A ++ + +QV+ ++L+DEG TVPFIARYRK +TGGLD+ ++ + Y EL Sbjct: 10 KFVAQKLNLKEDQVEVVLKLMDEGATVPFIARYRKNVTGGLDEEVIQQISDMYVYNVELN 69 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 +R++AI+ + E+G LT ++ + A +K E+E++Y P+K ++T+ AI GLEPLA Sbjct: 70 KRKEAIIDILKEKGLLTPEIENKLKAAETKAEVENIYEPFKVGKKTKASEAIALGLEPLA 129 Query: 128 DLLW--SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 + +D S P A +Y+ + V + A++ A+YI+ + ++D V+ ++ Sbjct: 130 KAIMEATDESFDPYKEAKKYL--NDKVPTVEFAIEQAQYIISQIMSQDVENREYVKKQIY 187 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN---AD 242 +V+ V E+E F+ Y+D+ E + +P+HR LA+ RG ++ +L + A Sbjct: 188 DFGFIVTKVKKNAEDEKEVFQQYYDYKERIKFIPNHRVLAISRGEDKKILSYDMTYNLAK 247 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 +D K Y + + G LN + DS + ++ R E+ + R Sbjct: 248 ITYDLNNK--YFK---IKRTGKILNESLKDSLDRLILPSIIR---------EIKSDLFAR 293 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 AE EAIN+FA NL +L+ + M +DP G K+A++D GK + IYP+ Sbjct: 294 AEKEAINLFATNLETMLLWPAVKNKTVMAIDPAFVNGCKIAILDPQGKFLKKALIYPNPP 353 Query: 363 Q--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK----VIVS 416 Q KA V L + + V ++ IGNGTASRETE F ++ K+ KV + +VS Sbjct: 354 QNYVDKAKEIVNKLLDSYKVNIIVIGNGTASRETEEFIANLLKERSKVNPNEDISYAVVS 413 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 E GASVYSAS++A EFPD V R AV+I RR QDPL ELVKIDPK+IGVGQYQHDV+Q Sbjct: 414 EVGASVYSASKVAIDEFPDFSVEERSAVNIGRRFQDPLNELVKIDPKAIGVGQYQHDVNQ 473 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 L++ LD V+ VN VGVDLN+A+ +L ++GLT+ +AQNI+ +R++ +F+ R++L Sbjct: 474 KDLSKALDFKVDKVVNMVGVDLNSATKEILCYISGLTKTLAQNIIDYREKINKFKERKEL 533 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 LKV LG KA+EQ GFLRI+ N D + +HPE+YP+ I+ A Q L D+ + E Sbjct: 534 LKVKGLGEKAYEQAVGFLRIHDSKNFYDRTAIHPESYPLAINIVNALQLDLNDIDLKTIE 593 Query: 597 LR--NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 + N A DF ++ V + D L P +D R + V + DL+PGMIL Sbjct: 594 QQDANKLAKDFNSNEYDVKLILD---SLSNPTKDIRDDKDGYILKKDVLKLEDLKPGMIL 650 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSL---SNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 +G+V N+T+FG FV IG+ Q L+HIS++ + +++ VVK GD +K+++LE+D + Sbjct: 651 DGSVQNITDFGIFVYIGIKQAALIHISNMKRNKDHYIKHSSEVVKTGDNIKIQILEIDKE 710 Query: 712 RKRI 715 R+RI Sbjct: 711 RERI 714 >UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonproteobacteria RepID=A8EWB1_ARCB4 Length = 702 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 267/734 (36%), Positives = 426/734 (58%), Gaps = 48/734 (6%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ I+ + + + ++LLDEG T+PFIARYRK+ T G D QLR E Sbjct: 1 MNNHLIEILKEKTNFSSKVISNIIKLLDEGCTIPFIARYRKDFTDGATDEQLRIFEEVYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y ++L R++ I+ + E+ L + + K + + + ED+Y P+K K+ +R AIE Sbjct: 61 YSKKLLVRKEEIIALLKEKNFLDEKVLKNLESATTLQACEDIYAPFKEKKSSRTTAAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+++ S E+ + ++ + A++GA+ I+ +R+A+D +R Sbjct: 121 GLEPLANIIQSMKYSLEEINQKAKQFLNQNITTIDEAINGAKDIIAQRYADDFKSKEVLR 180 Query: 182 DYL--WKNAHLVSTVVSGKE-EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 + + W + +T KE ++ + + D +E + + SHR LA+ RG NE L + Sbjct: 181 NLIANWGTLEIKAT----KELDKNGLYASFVDSNEKIKYIKSHRVLAILRGVNEKQLSIK 236 Query: 239 LNAD--------PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH 290 + D ++ P ++++ D +++ G+ +L Sbjct: 237 VEIDENHILENIKKYKIPINAESSKELVFD------------AYKDGLKRL-----LLPS 279 Query: 291 LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGK 350 L+ E + ++E+A EAI +F +NL +LL+ AP + +G+DPG +TG K+AV+D G Sbjct: 280 LKREAITALKEKASSEAIELFGKNLKELLLTAPLVNQMILGMDPGYKTGCKLAVIDENGL 339 Query: 351 LVATDTIYPHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKV 408 + + IYP + ++ V L +K+ + +AIGNGTASRET F ++ KQ + Sbjct: 340 YLDSAVIYPTKPKEDIVSSSKVVLDLIKKYKITTIAIGNGTASRETANFINELIKQ-NNL 398 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 468 IVSE GASVYSAS++A +E+P+LDV++RGA+SIA RL+DP+A LVKIDPKS+G+G Sbjct: 399 DVNYAIVSEIGASVYSASKIAIEEYPNLDVTIRGAISIASRLRDPMAALVKIDPKSLGIG 458 Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENG 528 QYQHDV+Q +LA KL+ + D VN VGVDLN+AS LL+ ++G+T +A+NIV R++ Sbjct: 459 QYQHDVNQKELALKLENITIDLVNKVGVDLNSASYKLLSFISGITEKLAKNIVEHRNKIK 518 Query: 529 QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ-QAL 587 +F + +LLKV +G KA+EQC GFLRI G + LD + +HPE Y V ++ + + + Sbjct: 519 KFNTKNELLKVKGIGEKAYEQCVGFLRIKDGLSILDNTAIHPEDYEVTAKLQKNYKVEEI 578 Query: 588 KDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 KD S+E+ + + DI+ EL KPG D R EF +FA+ + +ND Sbjct: 579 KDFEKVSNEINT-----------SLLKLKDIVTELLKPGYDVRTEFNQVKFANDILDIND 627 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG-DIVKVKVL 706 L+ G IL G V N+T+FGAFVDIG+ D L+HIS +S K + V+ ++ +KV+ Sbjct: 628 LKEGYILSGIVRNITDFGAFVDIGLKNDALLHISQISEKRISHASDVLSINQNLENLKVI 687 Query: 707 EVDLQRKRIALTMR 720 VDL+++R+ L+++ Sbjct: 688 SVDLEKQRVGLSLK 701 >UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=delta/epsilon subdivisions RepID=D1B1Y3_SULD5 Length = 704 Score = 473 bits (1216), Expect = e-131, Method: Compositional matrix adjust. Identities = 270/710 (38%), Positives = 412/710 (58%), Gaps = 32/710 (4%) Query: 19 EQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS 78 E + ++LL+EG+T+PFIARYRKE+T G D LR E+ +Y ++L+ R++ +L+ I Sbjct: 17 ENIINILKLLEEGSTIPFIARYRKEMTDGASDEALREFESIYAYAKKLQSRKEEVLRLIE 76 Query: 79 EQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTP 138 E+ LT ++ A+ +ED+Y PYK K+ +R +AI L PLAD+L Sbjct: 77 EKATLTPEIKSAVEKAQMLQAVEDIYRPYKEKKNSRATVAIANRLTPLADILEKAELEAE 136 Query: 139 EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV---V 195 + ++ V K A+ GA+ I+ ER+++DA K R+Y H S+ Sbjct: 137 AFEKKAQSFVNEKVESVKEAISGAQDIIAERYSDDA----KEREYWRVQLHDFSSFEIKA 192 Query: 196 SGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCE 255 S + + +E ++++PSHR LAM RG E L + ++ + + + E Y Sbjct: 193 SKTLQAEGLYAKLAGKNERIASIPSHRYLAMMRGVAEKELHVKISYEMERVQSSIERY-- 250 Query: 256 QIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH--LETELMGTVRERAEDEAINVFAR 313 R+ + S + ++ K L+ +E E+ ++E+A+ AI F + Sbjct: 251 ---------RIPSNAKSSKTYLLEAYGDGFKRLLFPSIEREIHALIKEKADTGAIATFGK 301 Query: 314 NLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA--AKAAMTV 371 NL LL P R +G+DP RTG K+AVVD G ++ IYP Q+ A+ + Sbjct: 302 NLSQLLNTPPVTKRVILGVDPAYRTGCKLAVVDEHGTYMSHAVIYPTPPQSDYENASRVI 361 Query: 372 AALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQ 431 L +K+++ VAIGNGT SRET+ F+ + ++ ++ +VSEAGAS+YSAS++A + Sbjct: 362 KELAQKYHISAVAIGNGTGSRETQEFFARLNRE-EGLSLAYTVVSEAGASIYSASKIATE 420 Query: 432 EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCV 491 E+P+LDV++RGA+SIA+RL+DP+A LVKIDPKS+G+GQYQHDV Q QL +KL V ED V Sbjct: 421 EYPNLDVTIRGAISIAQRLRDPMAALVKIDPKSLGIGQYQHDVDQKQLEKKLHEVTEDLV 480 Query: 492 NAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCA 551 N +GVD N+AS+ LL+ VAG+ +A+ IV R+ G F + +LL V LG KA+EQCA Sbjct: 481 NRIGVDPNSASISLLSYVAGVGAKLAKAIVEHRESKGAFTCKSELLHVKGLGAKAYEQCA 540 Query: 552 GFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFG 611 GF RI G + LD + VHPE Y + +++LA DL S E A ++ G Sbjct: 541 GFFRIREGKSVLDNTGVHPENYAIAQKLLARP-----DLATLSKEQIIALA---LEQGIG 592 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 T+ DII EL KPG DPR E F + +++L G I+ G V N+ +FGAFVDIG Sbjct: 593 EATLQDIIAELLKPGFDPREELPPIAFRSDLTDISELSEGSIVSGVVRNIADFGAFVDIG 652 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAG-DIVKVKVLEVDLQRKRIALTMR 720 + DGL+HIS +S K + P V+ + +++VLEVD ++ +++L+++ Sbjct: 653 LKNDGLIHISQMSEKRIAHPLEVLSINQQLTRIRVLEVDKEKGKVSLSLK 702 >UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJP5_THEM4 Length = 662 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 260/717 (36%), Positives = 404/717 (56%), Gaps = 64/717 (8%) Query: 9 IIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEE 68 IIA E++ + QV A+ LL E NT+ F++RYRK+ TGGL++ QLR +E R YLR +E+ Sbjct: 4 IIAKELEIKSWQVKNAIELLKE-NTIHFVSRYRKDQTGGLNEIQLRKIEKRYKYLRNVEQ 62 Query: 69 RRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAD 128 + ILK + + G LT L K I T + ELED+YLP+K +++T+ IAIE GL PLA+ Sbjct: 63 LKIKILKILEKDGVLTPQLKKKIEHTFTLNELEDIYLPFKKRKKTKADIAIENGLLPLAE 122 Query: 129 LLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 + + + V + + ++G IL ++F+ + + K+ +L K Sbjct: 123 ------------KSTKGTINLELVNEKEKIIEGITDILAQKFSHNDIVRKKLEIFLIKYG 170 Query: 189 HLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 ++ ++ K+ Y + + LS + H L++ RG EG L++ L +F E Sbjct: 171 YVKCKKKV---KKKTKYDMYDNFTKKLSLLHPHNILSINRGEKEGALKVKLYLPEKFKED 227 Query: 249 PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAI 308 I + + N +KG W+I + +E + + E+AE+ +I Sbjct: 228 ---------IFNLMNWNKNEIVEKGLKKG-----WKI-LFSSIEKRVRKILTEKAEERSI 272 Query: 309 NVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT--GQAAK 366 VF++NL LL+ P + +DPG +TG K+ +D G + IYP Sbjct: 273 KVFSKNLKQLLLTPPLKNTRILAIDPGNKTGCKIVALDELGNPLEHAVIYPTAPYFDTKN 332 Query: 367 AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSAS 426 + + + + H ++L+ IGNGTASRET++F K++ + + + +EAGASVYS S Sbjct: 333 SEKKILKMLQNHKLKLIVIGNGTASRETQQFIAKTIKKY-NLKTKYIFSNEAGASVYSVS 391 Query: 427 ELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAV 486 ++A +EFP LD ++R A+SI RR+QDPLAELVKIDPKS+G+GQYQHD++Q +LA +L Sbjct: 392 DIAIEEFPTLDPTIRSAISIGRRVQDPLAELVKIDPKSLGMGQYQHDINQKKLAEELKNA 451 Query: 487 VEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKA 546 V D VN +G+DLN+AS LL VAG+T +A+ IV +R + G+F R+QLL++ LG K Sbjct: 452 VTDIVNQLGIDLNSASSKLLEHVAGITPSLAKKIVNFRKKIGKFTERKQLLEIEGLGQKT 511 Query: 547 FEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT 606 + QCAGFLRI +G NPL+++ +HPE Y + IL N+ D+ Sbjct: 512 YTQCAGFLRIKNGKNPLESTAIHPEHYKIANEILK----------------NNIYDLDYL 555 Query: 607 DEKF--GVPTVTDIIKELEKPGR-DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 +KF G+ T+TDII EL+ G+ D P T F + + +L+ GM L+G V N+T+ Sbjct: 556 SKKFNVGILTLTDIINELKSMGKEDNLP---TPIFYNEITDFKELKIGMKLKGKVINITD 612 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 FG FVDIG+ + G +H K ++ +K DI+ V+V+++D + I L R Sbjct: 613 FGIFVDIGLKESGFIH-----KKLIDKE---IKINDIIDVEVIDIDNDLRYIKLKSR 661 >UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFY9_THEAB Length = 675 Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust. Identities = 260/720 (36%), Positives = 415/720 (57%), Gaps = 56/720 (7%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 ++I+ ++ QV A+ LL E NT+ F+ARYRK+ TGGL++ QLR ++ Y ++E Sbjct: 3 KLISKKMNLENWQVKNAILLLKE-NTIHFVARYRKDQTGGLNEEQLREIQNLFHYYEKVE 61 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 + ++ ILK++ ++ KLT +L K I + ELE +YLPYK K++++ IAIE GL L Sbjct: 62 KEKKKILKALEKENKLTIELKKKIENSYDLDELEQIYLPYKKKKKSKADIAIENGLLELY 121 Query: 128 DLLWSDP-SHTPEVAAAQYVYADKGVADTK-AALDGARYILMERFAEDAALLAKVRDYLW 185 + L ++P S E+ Y +K + DTK ++G I+ + F+ D + ++ ++ Sbjct: 122 NKLINNPESFEKEIPK----YFNK-IFDTKDKVIEGLINIIAQNFSHDENIRKRLEFLIF 176 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + +L T K + K+ Y + + + + + L++ RG E +L++ + D +F Sbjct: 177 EYGYLKCT---KKVDYKTKYDAYENFSQKIKNLKEYSVLSINRGEKENILKVQIVLDDKF 233 Query: 246 DEP----PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 K +II+ L L WRK S RI+ + + Sbjct: 234 KNEIFKLTKLDLKNEIILKGLEL--------GWRKLFDSIKKRIR----------NQLTQ 275 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH- 360 +AE+ AI +F++NL LL+ P + + +DPG +TG K+AV+D GK + I+P Sbjct: 276 KAENRAIVIFSKNLKQLLLTPPLKDKRILAIDPGNKTGCKIAVLDENGKFLEKAIIFPTP 335 Query: 361 -TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 + V L +K ++ L+ IGNGTASRET++F ++ K+F + + + +EAG Sbjct: 336 PHNDIENSEKIVIELIKKFDLNLIVIGNGTASRETQKFIVNTIKKF-NLDVKYIFANEAG 394 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYS S+LA +EFP+LD ++R A+SI RR+QDPL+E VKIDPKS+GVGQYQHDV+Q +L Sbjct: 395 ASVYSVSKLAMEEFPNLDPTIRSAISIGRRVQDPLSEFVKIDPKSLGVGQYQHDVNQKRL 454 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 +L+ + +D VN VGV+LNTAS LL V+G+T +A+ IV +R+++G+F R QLL + Sbjct: 455 EEELNNITKDVVNMVGVNLNTASAKLLEYVSGITPSLAKKIVKYREKHGKFIERNQLLNI 514 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 LG K FEQCAGFLRI G NPL+ S +HPE Y + +I++ + D+ S EL Sbjct: 515 EGLGEKTFEQCAGFLRIIDGKNPLEKSRIHPEQYEIANKIISLNLDNI-DIEKLSRELN- 572 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 G+ T+ DII EL+ PG DPR + D + T DL+ G+ L+G VT Sbjct: 573 ----------VGILTLKDIINELKNPGLDPRESIPKPKLFDDILTFEDLRIGLRLQGKVT 622 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 N+T+FGAF+DIG+ + ++ ++ + DIV ++++++D Q + I + + Sbjct: 623 NITDFGAFIDIGLKESAFLYKKLITRD--------LNINDIVDIEIIDLDQQLRHIKVKL 674 >UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 Length = 706 Score = 439 bits (1130), Expect = e-121, Method: Compositional matrix adjust. Identities = 246/697 (35%), Positives = 401/697 (57%), Gaps = 36/697 (5%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D + + +++ + + + LL + NT+ FIARYRK +T +D+ Q++ + Sbjct: 1 MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YL +L +R++AI+K++ ++G LTDDL ++IN +LE+LY PY ++T+ +AIE Sbjct: 61 YLTKLNKRKEAIIKNLEQKGLLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEK 120 Query: 122 GLEPLADL-LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLA L L ++P+ + A QY+ ++ V A+ GA I+ ++ A DA L + Sbjct: 121 GLEPLALLILKNNPNCNIKEVAKQYL--NEQVLSVDEAIAGACDIIAQKVANDATLRQML 178 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 + + K+A L++ + + F Y++ P+ + +++ +A+ R ++ L+ Sbjct: 179 YETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLD 238 Query: 241 ADPQF----------DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH 290 +F + +SY D++ L +N+ V + ++ K+ Sbjct: 239 FKKEFLIDFAINKYTRKNKSDSY------DYIKLAVNDGFDRLLIPSVSNAVYKEKL--- 289 Query: 291 LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGK 350 + A ++ +F+ NL LL+ P +G DPG G K+AVVD + Sbjct: 290 ----------DEAHQQSAQIFSDNLQQLLLQKPLKDHIVLGFDPGYAHGCKLAVVDKNNQ 339 Query: 351 LVATDTIYPHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKV 408 L+ TD IYPH Q +A T+ +L K+ + +AIGNGTAS E+ F D+ K+F K+ Sbjct: 340 LLHTDIIYPHKPQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEF-KL 398 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 468 ++SE GAS+YSAS +A++EFP+L V R A+SIARR+ DPL EL+KIDPKSIGVG Sbjct: 399 NINYCVISEDGASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVG 458 Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENG 528 QYQHD+++ L +K+D ++ CVN VGVD+NTAS+PLL++V+GL + A+ I + E+ Sbjct: 459 QYQHDINKNILEQKVDFCIDYCVNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQ 518 Query: 529 QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALK 588 ++R+QL + + K FEQ AGFLRIN+ N LD +++HPE+Y +V ++ + + Sbjct: 519 SIKSREQLKTIPYVTDKVFEQAAGFLRINNSLNFLDKTSIHPESYAIVNQLCEYIKLPIN 578 Query: 589 DLMGNSSELRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 DL+ N L L +D T+ K V T+ +II L+ P +D R ++ + +ND Sbjct: 579 DLINNHQVLNQLNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDIND 638 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 L+ GM+++G + N T FG+FVDIG+ D L+HIS S Sbjct: 639 LKVGMLVQGTIRNQTQFGSFVDIGLKNDALLHISHYS 675 >UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Mycoplasma RepID=B3PNC1_MYCA5 Length = 717 Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust. Identities = 244/725 (33%), Positives = 409/725 (56%), Gaps = 26/725 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN S + A ++ +QV+ ++LL EG T+PFI+RYRK +TGGLD+ + + Sbjct: 1 MNISVLNV-AKKLALEEKQVEETLKLLAEGATIPFISRYRKNVTGGLDEEAIAQINDFYQ 59 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y EL +R++ +++ + E+G LTD+L K I +K +E++Y P+K ++T+ AI Sbjct: 60 YDVELLKRKEYVIEILKEKGLLTDELNKKILEASTKQAVENIYEPFKIGKKTKATEAIAL 119 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + + + V Y + + +T+A + +YI+ + ++D ++ Sbjct: 120 GLEPLAKTIMQNRDESFNVFKEAAKYISEKLPNTEAVIGQTKYIIAQIISQDIEARENIK 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 +++ + + + ++ F Y++ E +S +P+HR LA+ R ++ ++ + Sbjct: 180 KEIYQYGWIKTALKKDAQDPKQVFLQYYEFGEKISKIPNHRILAISRAEDKKIISYT--- 236 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 FD K+ + + R D R + +L ++ E+ + E Sbjct: 237 ---FDYSVKKLVYDLSNRYFVNKRTAFITNDCARDALERL-----ILPSIDREIKSELFE 288 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RA+ EAI +FA N+ +L+A + + +DP G K+AV+D G + I+P+ Sbjct: 289 RAQAEAIKIFANNVEQMLLAPATKNKKILAIDPAYVHGCKLAVLDENGNFLEKGLIFPNE 348 Query: 362 --GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK----QFPKVTAQKVIV 415 + A + V L +K++++L+ IGNGTASRETE+F ++ + Q P + +V Sbjct: 349 PRSEIKNATLRVNGLLDKYSIDLIVIGNGTASRETEQFISNLLQNRKVQHPNENIRFAVV 408 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 SE GASVYSAS++A +EFP+L V R A++I RR QDPL EL+KI+PKSIGVGQYQHDV+ Sbjct: 409 SEIGASVYSASKIAQEEFPNLSVEERSAINIGRRFQDPLNELIKIEPKSIGVGQYQHDVN 468 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +L +LD V VN VGVDLN+A+ +L+ ++GL+ +A+NIV R +NG F+NR++ Sbjct: 469 QKELTSELDFKVNKVVNMVGVDLNSATKIILSHISGLSNTIAKNIVEHRLKNGNFKNREE 528 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 L V LGPKA+EQ GFLRI+ N D + +HP+ Y + ++LAA +++L N Sbjct: 529 LKNVKGLGPKAYEQSVGFLRIHDSTNFYDKTNIHPDQYELANKVLAALNLNVENLDKNIL 588 Query: 596 ELRNLK--ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 N + A + ++ + + D L PG+D R + +D + T++DL+ G Sbjct: 589 MEANKEKLAKELNTNEYDISLILD---SLISPGKDIRDDKDGFILSDKLLTVDDLEIGKR 645 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN---KFVEDPHTVVKAGDIVKVKVLEVDL 710 G V NVT+FGAF +G+ Q LVHIS++ F++ P ++ G+ ++++ +D Sbjct: 646 YTGQVINVTDFGAFFFLGIKQSALVHISNMKKDDESFIKHPSEILNVGENWTIEIISIDK 705 Query: 711 QRKRI 715 +R+RI Sbjct: 706 ERERI 710 >UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L5_MYCS5 Length = 705 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 237/721 (32%), Positives = 405/721 (56%), Gaps = 40/721 (5%) Query: 9 IIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEE 68 I+A E+ QV+ + EG TVPFIARYR+ T L++ Q+ +++ Y EL + Sbjct: 8 IVAKELNITVSQVETVLNYFKEGATVPFIARYRQSQTNNLNEEQIYAIQSLYLYASELSK 67 Query: 69 RRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAD 128 R++ I++ + E L +DL + IN+ K+ELE +Y PYK + T+ ++AIE GL PLA Sbjct: 68 RKEKIIEKLKELNLLNNDLEQKINSCTKKSELESIYEPYKSGKITKAKMAIELGLMPLAL 127 Query: 129 LLWSDPSHTPEVAAAQYVYADKGVADTKAALD----GARYILMERFAEDAALLAKVRDYL 184 +W++ + ++ A K ++D LD YIL ++ +ED L K+++ + Sbjct: 128 KIWNNKNSRFDLNFE----ARKFLSDKLKTLDEVILNVNYILSQKISEDFDLREKLKENI 183 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 L+ + +++E +F++Y+ + P+ V +H +A+ RG N ++ + Sbjct: 184 LAYGKLICKK-TKEQDENDRFKNYYQYSTPIKYVKNHNIMAINRGSNLKKIKWDV----- 237 Query: 245 FDEPPKESYCEQIIMDHLGLR--LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 Y I++ + LR ++ K V+ + +L L+ ++ + + Sbjct: 238 --------YLNFEILERISLRKITKFKFNEALLKDAVNDALKRLILPSLKNKIFSDLFDE 289 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT- 361 AE ++I +F+ N+ LL A + +DPG +G K+A + G ++ TIYP+ Sbjct: 290 AEKKSIEIFSNNVETLLSAPAVSGHNILAIDPGYVSGCKLAALSEKGSVLEIATIYPNEP 349 Query: 362 -GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 ++A V L +KHN+ ++ IGNGTASRETE+F ++ ++ IVSEAGA Sbjct: 350 RSNVSQAKTKVLELIKKHNITIIVIGNGTASRETEQFINNLIQENNLDNIYFCIVSEAGA 409 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSASE+A +EFP+L V R A++I R+ DPL ELVKIDPKSIGVGQYQHDV+Q +L Sbjct: 410 SVYSASEIAIEEFPNLSVEKRSAINIGRKFLDPLNELVKIDPKSIGVGQYQHDVNQKELQ 469 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 L+ V+ VN GVDLN+AS +L+ ++GL + +QNI+ +R++N F++R ++LKV Sbjct: 470 NYLNFKVQKVVNNYGVDLNSASREILSYISGLDKKTSQNIINYRNKNKSFKSRDEVLKVD 529 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAA-----TQQALKDLMGNSS 595 +GPK FEQ GFLR+ + N LD + +HPE+Y + +I++ +++ +K+L N+ Sbjct: 530 GIGPKTFEQSIGFLRVFNSSNFLDKTAIHPESYSLANKIISEYKLIPSEEGIKNLELNAK 589 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 EL +S + + I+ L+ P + R + + + +L+ G I++ Sbjct: 590 ELSEKYSS-------SIEEINLILSSLKNPTKIIRSSKQGYLLKKNLINLENLKIGDIVD 642 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 + N+T+FG F IG+ + VHIS+L+ K + + +++KV++ E++ + K+I Sbjct: 643 ATIDNITDFGLFCYIGLKESLFVHISNLAKK--GNIYESYNLNNLIKVEITEINKENKKI 700 Query: 716 A 716 + Sbjct: 701 S 701 >UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FHE5_9CHLO Length = 768 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 293/744 (39%), Positives = 397/744 (53%), Gaps = 58/744 (7%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E+ R V AV L+DE TVPFIARYRKE TGG+D+ LR + RL L +LE+R Sbjct: 22 IARELGLRERHVREAVALMDEECTVPFIARYRKEATGGMDERALRRVADRLGELDKLEQR 81 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R AIL ++ + G L LA+A+ A + T LEDLYLP++PKR TR A++ GL PLAD Sbjct: 82 RDAILAALEKSGDLNPALARAVAAADTPTRLEDLYLPHRPKRATRASAALDLGLGPLADD 141 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 L DPS + GVAD AA+ GAR I+ E+ E Sbjct: 142 LL-DPSTPYSRGFIRRFVKAPGVADDDAAMRGARDIVAEKAGE----------------- 183 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 V + + RDY + + H+ LA+ R GV+++S+ ++D+ P Sbjct: 184 CVEAREAARRASRDAARDYLSFERDIQRIQPHQYLALCRAETAGVVRVSV----EWDDTP 239 Query: 250 KESYCEQIIMDHLGLRLNNAP-ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAI 308 + ++ GLR A ++ K V R E E +R+ A A+ Sbjct: 240 AVDAARRALVRK-GLRGEKAAEVEAAVKDGVKRLLRPAA----ERETRARLRDDAIRRAV 294 Query: 309 NVFARNLHDLLMAAPAGLRA-TMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKA 367 F N+ L++A P A +GLDP RTG K+A V ATG ++A ++P A A Sbjct: 295 RDFGANVAALILAPPMRPAAPVVGLDPAHRTGCKIAAVSATGAVLAAAVVHPRREDANAA 354 Query: 368 AMTVAA-----LCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI----VSEA 418 A CE+H VA+G+G +RE ER K + I VSE Sbjct: 355 GGGEAGRRFREFCERHGARAVAVGDGVGTREAERMVAAALAGSKKSGSTSGIGWRVVSEC 414 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSASELA E PDLDVSLRGAVSIARRLQDP+AELVKI+P+ +GVG YQHDV + Sbjct: 415 GASVYSASELAIAELPDLDVSLRGAVSIARRLQDPMAELVKIEPRHLGVGLYQHDVRAKE 474 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 LA +LD VE V A GV+LNTAS LL RV G+++ +A+ VA R+ G F +R+ LL Sbjct: 475 LAAELDQAVESAVAAAGVNLNTASAALLARVPGMSKSLAEKTVAHRESRGPFASRRGLLD 534 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V +G K F+Q AGFLR++ + L+ + VHPE Y AA + L+DL + Sbjct: 535 VKGVGEKTFQQAAGFLRVDSAKDALEMTAVHPEGYE------AAMEVRLEDLRRLRPAID 588 Query: 599 NLKASDFTDEKF---------GVPTVTDIIKELEKPGRDPRPEFKTA-QFADGVETMNDL 648 +L +D +F G T+ + ++ + KPG D R F A + ++ DL Sbjct: 589 SLLGRGASDPEFKTIASAAGIGELTLKETLRAMAKPGVDDRDVFDAASRLRTSALSLTDL 648 Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL----SNKFVEDPHTVVKAGDIVKVK 704 + G +LEGAV NV FGAFVD+GV GLVH S++ +PH V+ AG V+V+ Sbjct: 649 KVGDVLEGAVRNVVPFGAFVDVGVGVSGLVHKSNMRGGNDKGRAPEPHEVLSAGQAVRVR 708 Query: 705 VLEVDLQRKRIALTMRLDEQPGET 728 V+ VD QR RI L + E+ E Sbjct: 709 VMSVDAQRNRIGLALLHRERRAEV 732 >UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding domain protein, putative n=1 Tax=Tribolium castaneum RepID=UPI0000D57194 Length = 753 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 272/720 (37%), Positives = 412/720 (57%), Gaps = 48/720 (6%) Query: 24 AVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKL 83 V+L ++GNTVPFIARYR+++T LD QLR ++ + L + ++LK + + G L Sbjct: 49 VVKLFEDGNTVPFIARYRRDVTNNLDAEQLRAVKDTCEEISALRGKIGSVLKQLDKSGVL 108 Query: 84 TDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEAGLE-PLADLLWSDPSHTPEVA 141 + L +++ + S ELE +Y PYK +RT + A E GLE P LL ++T V Sbjct: 109 NEQLRRSVVNSRSIEELEYIYAPYKSGSKRTLAERAKEQGLEAPALALL----NNTKRVR 164 Query: 142 AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE-- 199 +V D G+ D KA +G +I+ + D+ +L+ +R++ K ++ T + + Sbjct: 165 FDDFVKIDDGL-DIKAVKNGIAHIIAAVISTDSEILSSLREFRKKANIIIKTKKAATKHK 223 Query: 200 -EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA-DPQFDEPPKESYCEQI 257 E KF +YFD PL + H+ LA+ RG N +L + + D F+E K+ C++ Sbjct: 224 VENSEKFDNYFDFEVPLKYIKPHQVLAINRGENLKILSVKVVLPDSLFNEFRKK--CDK- 280 Query: 258 IMDHLGLRLNNAPADSWRKGVV-SWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLH 316 LR + D ++ + S+ +K L ++ E+ +++ AE + VF+ NL Sbjct: 281 ---WTSLRGDRVRQDVVKRAIEDSYQRLVKPL--IKREIRAELKQNAERASCQVFSSNLK 335 Query: 317 DLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCE 376 DLL+A P + +GLDPG G K+A++ G L+ + IYPH + + + Sbjct: 336 DLLLAPPLRGQTILGLDPGFTNGCKLALISPLGDLIDQNIIYPHKRKNNDDVTIIRDMLL 395 Query: 377 KHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVSEAGASVYSASELAAQEFP 434 ++N EL+A+GNGTA R+TE + D+ K F + + +V E GAS+YS S A +EFP Sbjct: 396 ENNCELIALGNGTACRQTEEWLSDLIKSQVFSPLDVKYTVVREEGASIYSCSPEAKKEFP 455 Query: 435 DLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 +D ++ AVS+ARRLQDPLAELVKI+PK +GVG YQHD+ + QL L+ VV +CV+ V Sbjct: 456 TIDPNIISAVSLARRLQDPLAELVKIEPKHLGVGMYQHDIKKRQLEEALNDVVSECVSFV 515 Query: 495 GVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFL 554 GVDLNTAS LL VAGL+ AQ I+ +R ENG F +RQQLLKVS +G K F QCAGF+ Sbjct: 516 GVDLNTASRCLLRHVAGLSDKKAQQIIDYRAENGPFISRQQLLKVSGIGQKIFTQCAGFV 575 Query: 555 RI------NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS-------ELRNLK 601 R+ N LD++ +HPE+Y + ++L L D+ G + E+ L Sbjct: 576 RVVPPSGETMKYNKLDSTNIHPESYEMATKLLKMFNLRLCDI-GTTGFITIAKREVPKLD 634 Query: 602 ASDFTDEKFGV--PTVTDIIKELEKP-GRDPRPEF-KTAQFADGVETMNDLQPGMILEGA 657 S + + FG T+ I+ +P D R ++ K F G+ ++DL+ G++L G Sbjct: 635 LSKLS-QMFGSNEQTLRLILDAFCQPLNYDLRSDYDKKPVFKKGLIEISDLKSGIVLTGV 693 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VTNVT+FG+FVDIGV +GL+H+S SN D H G+ V+VKVL +D+++KRI L Sbjct: 694 VTNVTHFGSFVDIGVGINGLIHVSK-SNGL--DLHL----GNKVEVKVLSIDVEKKRIGL 746 >UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 Tax=Chordata RepID=SRBD1_HUMAN Length = 995 Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust. Identities = 276/801 (34%), Positives = 407/801 (50%), Gaps = 102/801 (12%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN ++++ P +RL ++ NT+PFI RYRKE+ LD LR ++ L Sbjct: 210 MNWDMVQVLSERTNIEPWVCANIIRLFNDDNTIPFIIRYRKELINNLDADSLREVQQTLE 269 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIE 120 LR + ++ + ++ I ++GK+++ L KA+ + ELE + PYK + T+ Q A + Sbjct: 270 ELRAVAKKVHSTIQKIKKEGKMSECLLKAMLNCKTFEELEHVSAPYKTGSKGTKAQRARQ 329 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAK 179 GLE A L P E++ Y+ D KG++ + G ++IL + A+D L Sbjct: 330 LGLEGAARALLEKPG---ELSLLSYIRPDVKGLSTLQDIEIGVQHILADMIAKDKDTLDF 386 Query: 180 VRDYLWKNAHLVSTV---VSGK---EEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 +R+ K + + VS K E++ KF Y + + H+ LA+ RG N Sbjct: 387 IRNLCQKRHVCIQSSLAKVSSKKVNEKDVDKFLLYQHFSCNIRNIHHHQILAINRGENLK 446 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLR----------LNNAPADSWRKGVVSWTW 283 VL + +N + K+ +C I + R L N+ DS+++ + Sbjct: 447 VLTVKVN----ISDGVKDEFCRWCIQNRWRPRSFARPELMKILYNSLNDSFKRLIYPLLC 502 Query: 284 RIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVA 343 R E + AE E++ +F RNL LL+ +P R MG+DPG + G K+A Sbjct: 503 R---------EFRAKLTSDAEKESVMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLA 553 Query: 344 VVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV-- 401 ++ T +++ TD +Y H GQ + A + L N V IGNGTA RETE ++ D+ Sbjct: 554 IISPTSQILHTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVIGNGTACRETEAYFADLIM 613 Query: 402 QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKID 461 + F + IVSEAGAS+YS S A +E P LD +LR AVSIARR+QDPLAELVKI+ Sbjct: 614 KNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRVQDPLAELVKIE 673 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIV 521 PK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S LL +AGL A+NI+ Sbjct: 674 PKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIAGLNANRAKNII 733 Query: 522 AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH----------------------- 558 WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 734 EWREKNGPFINREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSQQTETSGQIQGVAVT 793 Query: 559 -------------------------GDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 NPLD + +HPE+Y + R L++ L ++ Sbjct: 794 SSADVEVTNEKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDIAMRFLSSIGGTLYEV--G 851 Query: 594 SSELRNLKASDFTD----EKFG------VPTVTDIIKELEKP-GRDPRPEFKTAQFADGV 642 E++ K + F + EK V T+ II L +P D R +F F + Sbjct: 852 KPEMQQ-KINSFLEKEGMEKIAERLQTTVHTLQVIIDGLSQPESFDFRTDFDKPDFKRSI 910 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS----NKFVEDPHTVVKAG 698 + DLQ G +L G V N T FG FVDIGV + GL+ I +++ +K + + G Sbjct: 911 VCLEDLQIGTVLTGKVENATLFGIFVDIGVGKSGLIPIRNVTEAKLSKTKKRRSLGLGPG 970 Query: 699 DIVKVKVLEVDLQRKRIALTM 719 + V+V+VL +D+ R RI L + Sbjct: 971 ERVEVQVLNIDIPRSRITLDL 991 >UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=Culicini RepID=Q17DE1_AEDAE Length = 968 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 264/752 (35%), Positives = 410/752 (54%), Gaps = 81/752 (10%) Query: 25 VRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLT 84 ++L +E NT+PFI RYRKE+ G + LR+++ + + ++ + I+K++ ++ KLT Sbjct: 237 IKLFEEENTIPFICRYRKELIGDMTPDDLRDVKLAYNQILSIKSKADTIIKNLEKEEKLT 296 Query: 85 DDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA---GLEPLAD--LLWSDPSHTPE 139 +D+ + + S EL+ +Y P+KP +G +A A GL+ A+ L+ S PE Sbjct: 297 EDIKQDLLCAKSIDELDHMYAPFKPA--NKGSLADRAKALGLDSFAEGILIGS----LPE 350 Query: 140 VAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV---V 195 + + V + +G+ + +G ++++ F+++ A+L ++R + K ++S+ Sbjct: 351 IDLPELVKPEVEGLETVEKVEEGIKHLMAHNFSKNTAVLEEIRRLISKYDIVLSSTQITK 410 Query: 196 SGKEEE---------GA-------------KFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 S K EE GA KF YF + H+ +A+ RG N+ Sbjct: 411 SRKAEEKDESNNNGKGAGGMKRIPKKVDEHKFEHYFSFTCCTKYLRPHQIMALNRGENQK 470 Query: 234 VLQLSL----NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLM 289 VL + L N K+ Y ++ L A D ++T ++ LM Sbjct: 471 VLSIKLQFKDNVKGDLYWFLKKEYLQEGTASRKRTELFEASFDE------AFTKKLVPLM 524 Query: 290 H--LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDA 347 + +EL +RAE ++ VFA NL LL+ AP +G+DPG G K+A++ Sbjct: 525 SRTVRSELT----KRAEKASVEVFANNLKQLLLTAPVKGEKILGIDPGFSNGCKLALISE 580 Query: 348 TGKLVATDTIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERF--YLDVQK 403 G L+ T TIYPH G ++ A +A + KH+ L+A+GNGTA RETE Y+ + Sbjct: 581 CGDLLDTATIYPHIGGERSKVAPGILANMMRKHSCALIALGNGTACRETESMLSYMMEEG 640 Query: 404 QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPK 463 K + IV E GAS+YS SE+A +EFP +DV+L AVSIARRLQDPL E VKI+PK Sbjct: 641 ILDKRFVRYSIVPEQGASIYSCSEVAKKEFPKMDVNLISAVSIARRLQDPLCEYVKIEPK 700 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAW 523 +GVG YQHD+++ L+ LD VV +CV+ VGVD+NTASV LL+ V+GLT A++IV+ Sbjct: 701 HLGVGMYQHDINEKSLSETLDEVVMECVSFVGVDINTASVSLLSHVSGLTAKRAEHIVSH 760 Query: 524 RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN------HGDNPLDASTVHPEAYPVVE 577 R +NG F++R+QLLKV +G K F QCAGF+RI N LD++ VHPE+Y + E Sbjct: 761 RTKNGPFRSREQLLKVKFIGDKTFTQCAGFIRIEPLTAGIRDYNLLDSTWVHPESYALAE 820 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD--------IIKELEKP-GRD 628 I+ + KD+ G + ++ + K +P + + ++ L++ RD Sbjct: 821 SIITKAGLSNKDI-GRVDFILGIRDFAYRTPKSALPGMFNQTIERIECVLSALQRELLRD 879 Query: 629 PRPEF-KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 R + K F G+ +M+DL G +L GAV NVT+FGAFVDIGV +GL+H S ++ Sbjct: 880 YRADINKPPMFKKGLTSMSDLAEGTVLTGAVNNVTDFGAFVDIGVENNGLIHRSKMNG-- 937 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 V GD V+V VL +D+ + R+ L + Sbjct: 938 -----MRVNIGDQVEVTVLSIDVGKGRLGLKL 964 >UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4RY29_OSTLU Length = 794 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 281/767 (36%), Positives = 409/767 (53%), Gaps = 84/767 (10%) Query: 17 RPEQVDAAVRLL-DEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILK 75 R EQ+DAA+RLL DE T+PF+ARYRKE T GLD+ QLR + + LE +R++ + Sbjct: 47 RREQIDAALRLLIDEQCTLPFVARYRKERTDGLDEGQLRAVAAAHAEWTRLESKRESAFE 106 Query: 76 SISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPS 135 +++ + + L + + +EDL YK K +R A E G EPLA+ + SD + Sbjct: 107 ALTRLEIVDERLFARLREASAVETIEDLMSKYKTKTSSRADRARELGCEPLAEKILSDGA 166 Query: 136 HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL-VSTV 194 E A YV + V D AL A+ +L ER A + + R W+N L + Sbjct: 167 GGVEALARAYVNGND-VPDVCEALRLAKDVLAERAANETSAREAARRSTWQNGRLQCALT 225 Query: 195 VSGKEE-EGAK-----------FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 +GK EG RDY++ + PL V H+ LA+ RG VL++ ++ Sbjct: 226 TNGKAAVEGKIDDKKMKKIADALRDYYEFNAPLRRVKPHQTLAILRGEAAKVLRVKID-- 283 Query: 243 PQFDEPPKESYCEQIIMD--HLGLRLNNAPADSWRKGVVSWTWRIKVLM--HLETELMGT 298 FD S + ++ LG N +++ GV K L+ +E E Sbjct: 284 --FDVAWATSAAMKAMVGSRRLGGGCYNVVSEAVEDGV-------KRLLAPSIEREAKSR 334 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRAT-MGLDPGLRTGVKVAVVDATGKLVATDTI 357 ++ A + AI F NL LL+ P A +G+DP RTG K+AVVD TG L+ T + Sbjct: 335 LKTEAMERAIADFGANLRSLLLQPPLTPAAVVLGVDPAYRTGCKLAVVDPTGALLDTGVV 394 Query: 358 Y-PH---------TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPK 407 + P GQ+A AA + AL ++ NV+ +AIG+G ASRETE F Sbjct: 395 HLPQFESKVKREGGGQSA-AASKLQALVKQWNVKAIAIGDGVASRETESLVATALAGFEG 453 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGV 467 V + +VSEAGASVYSASE+AA+E PD+DVSLRGAVSIARRLQDP+AELVKI+P+SIG+ Sbjct: 454 VGWR--VVSEAGASVYSASEIAAKELPDIDVSLRGAVSIARRLQDPMAELVKIEPQSIGI 511 Query: 468 GQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDEN 527 G YQHDV + +LA L A VE V VG +LNT+S LL+R+ GL +A IV R E Sbjct: 512 GLYQHDVKEKELADALTATVESAVANVGANLNTSSQSLLSRIPGLGPSLAAKIVRHRSER 571 Query: 528 GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQAL 587 G+F+ R L ++ +G K +EQ GFLR+ + L+ ++VHPE+Y + +++L ++ + Sbjct: 572 GRFRERAALKTIAGVGAKTYEQIIGFLRVPDAKDALERTSVHPESYHIAKKLLKMLERDV 631 Query: 588 KDLM-------GNSS--ELRNLKAS------DFTD-------EKFGVPTVTDIIKELEKP 625 +++ G++S L+ LK D D K T+ DI EL P Sbjct: 632 AEVIDLTASDAGDTSMDALKRLKPKLKALRDDVKDLEARAARLKCHPLTLKDIANELSAP 691 Query: 626 GRDPRPE------FKTAQFADGVETMNDLQPGMILEGAVT-NVTNFGAFVDIGVHQDGLV 678 G D R + +T T+ DLQ G ++ AV NV FG F+D+GV +D L+ Sbjct: 692 GDDARGQAAEQNVLRTQAL-----TLEDLQTGAEIKNAVVRNVVPFGCFLDLGVGRDALL 746 Query: 679 HISSLSNKFVE------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 H++++ + DPH + + G V+V VD+ R+RIA+ + Sbjct: 747 HVTAMRKRTDANPNAQIDPHALYRVGQTCAVRVKSVDIARQRIAVEL 793 >UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding domain-containing protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C576 Length = 795 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 258/766 (33%), Positives = 393/766 (51%), Gaps = 98/766 (12%) Query: 33 TVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAIN 92 T+PFI+RYRKE+T G+D LR L LR+++++ ++ + +Q L + +++N Sbjct: 38 TIPFISRYRKEVTHGMDPNTLRMFLDTLKELRDVQKKATTAIRQVQKQEPLDHAVVESLN 97 Query: 93 ATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD-KG 151 A + E+ L PYK ++T A GL+ A + ++P + ++V D +G Sbjct: 98 AAETVEEINVLLAPYKVDKKTLACRARTLGLDNAAKAILNNPRQL--INLNEWVKKDCEG 155 Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSG---------KEEEG 202 A+ K G ++I+ E A D L +++ YL + +S KE+ G Sbjct: 156 RANLKEVKTGVKHIICEAIARDKTTLERIKRYLKPTCLTLEAKMSASKKKAMDAEKEKGG 215 Query: 203 -------AKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN----ADPQFDEPPKE 251 +KF Y +S + S++ LA+ RG L + ++ A+ F + Sbjct: 216 HSTSQNTSKFECYHHFQHNVSALRSYQVLAINRGEALKELTVKIHISERAENNFIDWCNY 275 Query: 252 SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVF 311 + E+ + + L +++ + + + +VL +EL T A+ ++++VF Sbjct: 276 KWAEEHKYEDMKTLLKECVTEAYTRLL-----KPQVLRKTRSELTKT----AQMDSVHVF 326 Query: 312 ARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATG-KLVATDTIYPHTGQAAKAAMT 370 RNL LL+ +P + +G+DPG + G K AVV + G +++A D Y H A A Sbjct: 327 GRNLKKLLLTSPVRGKIILGIDPGYKNGCKCAVVSSNGMEILAVDVFYLH--HANPAVSK 384 Query: 371 VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK----VIVSEAGASVYSAS 426 + L K N++L+ IGNGTA RETE ++ +F V+ +K IV+E+GAS+YS + Sbjct: 385 LLQLLNKFNIQLIGIGNGTACRETE----ELVSRFIYVSCKKDLKYCIVNESGASIYSVT 440 Query: 427 ELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAV 486 E A QE PDLD +LR AVSIARRLQDPL ELVKID K +G+G YQHD+ + L +V Sbjct: 441 EEAKQEMPDLDPNLRSAVSIARRLQDPLVELVKIDAKHLGIGMYQHDIPDILMKATLQSV 500 Query: 487 VEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKA 546 VEDCV VGVDLN A LL VAGL + I+ WR++NG F NR QLL+V +G K Sbjct: 501 VEDCVTFVGVDLNVAGASLLRHVAGLKKTQVDKILKWREKNGPFINRDQLLEVPGVGKKT 560 Query: 547 FEQCAGFLRI--------------------------------------------NHGDNP 562 FEQCAGF+RI +H NP Sbjct: 561 FEQCAGFMRIVQKANTPSECQKKSVKTEHVKTEPTDKRKRKITATSKNSKKQKLHHEVNP 620 Query: 563 LDASTVHPEAYPVVERILA----ATQQALKD-LMGNSSE-LRNLKASDFTDE-KFGVPTV 615 LD + +HPE+Y E+ L ++ + KD + N + +R S F +E + G PT+ Sbjct: 621 LDQTWIHPESYKTTEQFLKKINLSSSEVGKDYFISNIKQAVRKKTISQFANELEVGEPTL 680 Query: 616 TDIIKELEKPG--RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 II L P RD R + + G+ + DL+ G ++G V+NV +FG FVDIGV Sbjct: 681 QLIIDGLSAPCGYRDIR-NVTSHFYKTGISCITDLRCGTTMQGKVSNVVDFGIFVDIGVG 739 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 DGLVH S + K+ E H V+ D++ V V V+ +KRI+L + Sbjct: 740 TDGLVHSSDMKGKWEELRH-VLGPNDLISVAVTNVNKPKKRISLRL 784 >UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586461 Length = 783 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 257/737 (34%), Positives = 390/737 (52%), Gaps = 45/737 (6%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 +N+S R +Q P V+ V+LL+E TVPFIARYRKE TG ++ +R +++ L Sbjct: 48 LNESGIRSNGNPVQ--PRIVENVVKLLEEECTVPFIARYRKEQTGNMEAAVIREIKSSLE 105 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIE 120 L+ ++E+ ++ L + ++ KLT +L ++ + S ELE L+ P+K + T + A Sbjct: 106 ELKVVQEKTKSHLGKLGKEKKLTKELRESFCNSHSMIELEQLFAPFKAGSKTTLAERARR 165 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALD-GARYILMERFAEDAALLAK 179 GLEP A+ L + + + + +++ D T A ++ G ++I+ E ++D + Sbjct: 166 TGLEPAAEKLLGETAGLFNIQS--FIHPDTEGCRTAAEVEKGVQHIIAEVVSKDKTTVDY 223 Query: 180 VRDYL--WKNAHLVSTVVSG------KEEEGA---KFRDYFDHHEPLSTVPSHRALAMFR 228 +R + K+ +S +G K+E+ KF+ YFD ++T+ H+ LA+ R Sbjct: 224 LRSCVKDMKDQIFLSVSKAGQARKKTKKEQQVDYEKFQTYFDGKFSINTIKPHQVLAINR 283 Query: 229 GRNEGVLQLSLNA----DPQFDEPPKESYCEQIIMDHLGLR-LNNAPADSWRKGVVSWTW 283 G L + + QF K +C + + + A D++ + + Sbjct: 284 GEEFKALTVKVTLPDRLTKQFINWCKAKWCSHTQPNSYSSKIMCMAVDDAYNRLMSPMIL 343 Query: 284 RIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVA 343 R E+ T+ + AE +I VF +NLH LL+ P R +G+DPG + G K+A Sbjct: 344 R---------EIRSTLNKTAEKASIEVFTQNLHRLLLTPPVKGRVILGVDPGFKNGCKLA 394 Query: 344 VVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK 403 ++ ATG+++ T HTG + L + E + IGNGTA R+TE F+ +V K Sbjct: 395 MISATGEILTTSVSLMHTGNKYYERNKMIDLIQTFKCETIGIGNGTACRQTEEFFSEVIK 454 Query: 404 Q--FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKID 461 + Q IV+E GAS+YS S A +E P+LD ++R AVSIARRLQDPLAELVKID Sbjct: 455 SGSLQPLHVQYCIVNEDGASIYSVSPEAEKEMPNLDPNIRSAVSIARRLQDPLAELVKID 514 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIV 521 PK IGVG YQHDV + L L VVE+ V+ VGVDLN S LL V+G++ +A+ I+ Sbjct: 515 PKHIGVGMYQHDVPERLLKAALGDVVEESVSFVGVDLNICSEVLLKWVSGISACLAKKII 574 Query: 522 AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILA 581 + R G F NRQ LL V LGPK F+QCAGF+RIN + ++ E + R+L Sbjct: 575 SHRQRFGAFINRQMLLDVKGLGPKTFKQCAGFVRINPTGGAEETNS--DEVIVISTRLLK 632 Query: 582 ATQQALKDLMGNS--SELRNL-----KASDFTDEKFGVPTVTDIIKELEKP-GRDPRPEF 633 + +D+ S +L NL AS G PT+ II L++P D R EF Sbjct: 633 MAFASGRDIGSESIRGKLDNLIKSRGNASLAGSIGVGEPTLDLIINGLKQPTNYDIRVEF 692 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 F + +++ + PGM L G VTN +FG FVDIGV GL H S + + ++ Sbjct: 693 DKPLFKQNIMSIDQIIPGMQLTGRVTNAVHFGVFVDIGVKDKGLCHRSHMLHHILKG--K 750 Query: 694 VVKAGDIVKVKVLEVDL 710 V+ GD V+V V+ L Sbjct: 751 VLGPGDKVEVVVISKKL 767 >UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Apis mellifera RepID=UPI0000DB7BEF Length = 740 Score = 362 bits (928), Expect = 4e-98, Method: Compositional matrix adjust. Identities = 257/743 (34%), Positives = 380/743 (51%), Gaps = 109/743 (14%) Query: 25 VRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLT 84 V+L + NT+PFIARYRK++TGG++ +LR L+ + + +++R ILK+I + G+ + Sbjct: 55 VKLFNNDNTIPFIARYRKDMTGGMEPDKLRALKESFDHAKMIKQRAHTILKAIDKLGQWS 114 Query: 85 DDLAKAINATLSKTELEDLYLPYKPK-RRTRGQIAIEAGLEPLADLLWSDPSHTPE---- 139 D+ AI + +LE +Y +KP +RT + A + GL ++DLL E Sbjct: 115 PDIHFAIISAKCLDDLEHIYSLFKPSSKRTLAEKAKDLGLGYISDLLLQVKELQNESIIK 174 Query: 140 VAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE 199 + + + +K V + + KN H Sbjct: 175 IQSTECKPKNKSVNNKE-----------------------------KNMH---------- 195 Query: 200 EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQ--- 256 K+ YFD + ++ H+ LA+ RG + +L + + P F E ++YC + Sbjct: 196 ---RKYEIYFDFNTNNRSIKPHQILAINRGEAQKILTIKI-ILPDFFEKEFKTYCYKYYR 251 Query: 257 --IIMDHLGLRLNNAPADSWRKGVVSWTWRIK--VLMHLETELMGTVRERAEDEAINVFA 312 +I+ L +L N D ++T IK V+ + +E+ + +AE +I VF Sbjct: 252 IAMIVSKLHSKLLNNSID------YAYTKFIKPLVIRRVRSEM----KRKAEIASIEVFV 301 Query: 313 RNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG---QAAKAAM 369 N+ LL+ P + +G+DPG G K+AV+ G ++ T IYPH ++A Sbjct: 302 NNVKQLLLTPPVRGKIILGIDPGYSHGCKLAVISEQGDVLETGVIYPHRNIEKTYNESAN 361 Query: 370 TVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVSEAGASVYSASE 427 + L K+ ++A+GN TA RETE F + K F + IV E+GAS+YS S Sbjct: 362 VLINLVTKYKATILALGNATACRETEIFINKLIKSNSFESLDVSYAIVDESGASIYSCSP 421 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 A EFP LD++L A+SIARRLQDPLAELVK++PK +GVG YQHD+ + QL L+ VV Sbjct: 422 EAKSEFPKLDMNLISAISIARRLQDPLAELVKVEPKHLGVGMYQHDLPEKQLLTSLNEVV 481 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 + V+ VG+D+NTAS LL RVAGL A NI+ WR E G F+NRQQL+ V +G K F Sbjct: 482 SEVVSFVGIDVNTASQCLLKRVAGLNVSRANNILEWRSEFGPFKNRQQLMDVKGIGSKVF 541 Query: 548 EQCAGFLRI----NHGDNP-------------------LDASTVHPEAYPVVERILAATQ 584 EQC GF+RI + DN LD + +HPE+Y + E L Sbjct: 542 EQCIGFIRILPETSMIDNSKKLRPIKKSKQAIKAEYNLLDQTWIHPESYKIAENFLKYCN 601 Query: 585 QALKDLMGNSSELRNLK---ASDFTD--EKFGV--PTVTDIIKELE-KPGRDPRPEFKTA 636 LK+L G + + +K FT EKF T+ IIK L K D R + ++ Sbjct: 602 IDLKNL-GTTEFIEKVKLYAKEGFTSLAEKFDTNKTTMEIIIKGLSMKKDEDIRLKTRSP 660 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 F + T++D+ M+L GAV N+T+FG FVDIG +DGL+ L N + Sbjct: 661 LFRKSMLTISDINVEMLLTGAVRNITHFGVFVDIGAGKDGLIPTKWLKN-------FTIS 713 Query: 697 AGDIVKVKVLEVDLQRKRIALTM 719 G V+VKVL VDL+R RI L + Sbjct: 714 IGQRVEVKVLSVDLERNRINLEL 736 >UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59DV5_DROME Length = 993 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 252/819 (30%), Positives = 406/819 (49%), Gaps = 136/819 (16%) Query: 17 RPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKS 76 +P+ V+L ++ NT+PFI RYR+++ + +LR++ + + +L +R + I+ Sbjct: 196 QPQAARNIVKLFEDENTIPFICRYRRDLVDHIAPDRLRDIRNTYTEIVDLRKRAENIIGK 255 Query: 77 ISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEAGLEPLADLLWSDPS 135 + + +T ++ + + S ELE LY PYKP + T + A GL+ AD L + Sbjct: 256 LQRENIMTPEIREELMCAKSNEELEFLYAPYKPASKGTLAERAKALGLQVYADCLLYGSA 315 Query: 136 HTPEVAAAQYV-YADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV 194 P+V ++ V ++ +A + G I++ +++ +L ++R +N H V Sbjct: 316 --PKVNLSEIVDRRNEALATEALVMSGICQIIIHNISKNTNVLEEIRR--LQNVHRVFLK 371 Query: 195 V--------------------------SGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFR 228 + K+ + +KF +YF+ + T+ ++ LA+ R Sbjct: 372 CSKTKEAKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNFQGDVKTIKPYQMLAINR 431 Query: 229 GRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLR-LNNAPADSWRKGVVS------W 281 G L + + + Y ++ +M ++ + +N R+ V + + Sbjct: 432 GEKHKWLSVKIETN---------DYLKRDLMRYITDQYMNQGLQYPLRREVFTKSLEECY 482 Query: 282 TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVK 341 +++ LM ++ ++E+ AI+VFA+NL LL+ +P +G+DPG G K Sbjct: 483 AKKLQPLMC--RQIRAALKEKGTKAAIDVFAKNLKQLLLISPLKGERILGIDPGFINGCK 540 Query: 342 VAVVDATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRETER--- 396 +A++ T ++ T IYPH + K A + L HN +++ +GNGTA RETE Sbjct: 541 LALISETADVLYTGVIYPHGAMSNKRAAEQKLVQLLSDHNCKIIGLGNGTACRETEHWLT 600 Query: 397 --FYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPL 454 F+ V + IV+E GAS+YS S +AA+EFP +D + R AVSIARRL DPL Sbjct: 601 GMFHAGV---LDSRIIRYSIVNENGASIYSCSNVAAKEFPKMDTNERSAVSIARRLNDPL 657 Query: 455 AELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTR 514 +E VKI+P+ +GVG YQHDV + L L+ VV +CV+ VGVDLNTAS+ +L +AGL+ Sbjct: 658 SEYVKIEPRHLGVGMYQHDVPEKILTASLNDVVSECVSYVGVDLNTASLSVLKHIAGLSE 717 Query: 515 MMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN------HGDNPLDASTV 568 A+ I+ R + G F+ R+ LL V +G K+F QCAGF+RI NPLD + V Sbjct: 718 KKAEKIIEHRTQKGPFKTRKDLLSVRSIGEKSFVQCAGFVRIEPRSVGGQLQNPLDCTWV 777 Query: 569 HPEAYPVVERILAATQQALKD-------------------LMGNSSE--LR--------- 598 HPE+Y VVE LA + AL + G SS LR Sbjct: 778 HPESYNVVES-LAFSSAALTNKEVSLGVTMSLSCCVMPAMFFGQSSSKFLRFVTSSIVGE 836 Query: 599 -NLKASDFTDEKF---------GVPTVTDIIKELEKPGRDPRPEF--------------- 633 +LK SD F P + I K+ + P R EF Sbjct: 837 CDLKLSDVGKAAFIASIKQFASSQPNLDRIAKQHKLPME--RLEFLLVALQRELLQDYRA 894 Query: 634 ---KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K F G+ ++DL G ++ GAVTNVT FGAFVD+GV ++GL+H S+++N Sbjct: 895 DLDKRPLFKQGLTRLDDLSMGEVVTGAVTNVTQFGAFVDVGVERNGLIHNSNMNN----- 949 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + + GD + V++VDL+R++ L +RL+ ET+ Sbjct: 950 --SQLSVGDRIVASVVKVDLKRRQ--LELRLENMLMETD 984 >UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing protein 1 n=5 Tax=Amniota RepID=Q497V5-2 Length = 611 Score = 348 bits (893), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 231/632 (36%), Positives = 325/632 (51%), Gaps = 90/632 (14%) Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDH 211 +A K LD R + R+ + LAKV S V+ KE + KF+ Y + Sbjct: 2 IAKDKDTLDFIRGLCKHRYICIQSSLAKVS----------SKKVNEKEVD--KFQLYQNF 49 Query: 212 HEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLR------ 265 + T+ H+ LA+ RG N +L + +N + K +C I + R Sbjct: 50 SCNIRTIHHHQILAINRGENLKILTVKVN----ISDGVKNEFCRWCIQNRWRPRGFARPE 105 Query: 266 ----LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMA 321 L+N+ DS+++ +V R E + AE +++ +F +NL LL+ Sbjct: 106 LMKILHNSLDDSFKRLIVPLLCR---------EFRAKLTSDAEKQSVMMFGQNLRQLLLT 156 Query: 322 APAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVE 381 +P R MG+DPG + G K+A++ T +++ TD +Y H GQ + A + L N Sbjct: 157 SPVPGRTLMGVDPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKRLLLHFNCR 216 Query: 382 LVAIGNGTASRETERFYLDV--QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 V IGNGTA RETE ++ D+ + F + IVSEAGAS+YS S A +E P LD + Sbjct: 217 TVVIGNGTACRETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPN 276 Query: 440 LRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 LR AVSIARR+QDPLAELVK DPK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N Sbjct: 277 LRSAVSIARRVQDPLAELVKFDPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDIN 336 Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN-- 557 S LL +AGL A+NI+ WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 337 ICSEVLLRHIAGLNANRAKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFVRINQD 396 Query: 558 --------HGD-----------------------------NPLDASTVHPEAYPVVERIL 580 H D NPLD + +HPE+Y + R L Sbjct: 397 YIRTFCSQHTDSSGQSQETAMVTNEKLGKKKNKADATLIPNPLDQTCIHPESYDIAVRFL 456 Query: 581 AATQQALKDLMGNSSELRNLKAS------DFTDEKF--GVPTVTDIIKELEKPGR-DPRP 631 + + ++ G + + S + T E+ V T+ II L +P D R Sbjct: 457 SFIGGTMCEI-GKPEMQQKINVSLGKEGIEETAERLQTTVHTLQVIIDGLSQPKTFDIRT 515 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS----NKF 687 +F F + + DLQ G +L G V N T FG FVDIGV + GL+ I ++ +K Sbjct: 516 DFDKPDFKRSIVCLEDLQVGTVLTGKVENATLFGVFVDIGVGKAGLIPIRFITEAKLSKT 575 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + G+ V+VKVL VD+ R RI+L + Sbjct: 576 KRRRSLGLGPGEKVEVKVLNVDIPRSRISLDL 607 >UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria RepID=C5VIF1_9BACT Length = 910 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 185/370 (50%), Positives = 232/370 (62%), Gaps = 63/370 (17%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +VSE GAS+YSAS +A +EFPD DV+ RGA+SI RRL DPLAELVKIDPKSIGVGQYQHD Sbjct: 537 LVSEDGASIYSASPVAREEFPDEDVTTRGAISIGRRLMDPLAELVKIDPKSIGVGQYQHD 596 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 V Q++L LD V CVN VGV+LNTAS+ LLT V+GL +A+NI+ +R E+G F +R Sbjct: 597 VDQSKLKHSLDQTVMSCVNQVGVNLNTASLHLLTYVSGLGPALARNIIDYRREHGPFTSR 656 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 QL KV RLG A++QCAGFLRI NPLD S VHPE+Y +VE++ + +KDL+GN Sbjct: 657 AQLKKVKRLGDTAYQQCAGFLRIPDAKNPLDNSAVHPESYHIVEQMAKDLKCTIKDLIGN 716 Query: 594 SS---------------ELRNLKASDFT--------------DEKFGVP----------- 613 LR + S+ + EK GVP Sbjct: 717 KKLLAEIDVKRYLTPQPPLRRERGSEASPNPSERRGGAPPNLPEKGGVPMRTREDKGALN 776 Query: 614 -----------------------TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 T+ DI+ ELEKPGRDPR E + +F V T++DL Sbjct: 777 LPQHLSNVSTSLPPLLSEGSGEATLRDILTELEKPGRDPRGEVEVFEFDKNVHTLSDLII 836 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM L G VTN+TNFGAFVDIGVHQDGLVHIS LS++FV DP V++ V+V+V+EVD+ Sbjct: 837 GMELPGIVTNITNFGAFVDIGVHQDGLVHISQLSDRFVTDPTQVIRLHQHVRVRVVEVDM 896 Query: 711 QRKRIALTMR 720 +RKRIAL+M+ Sbjct: 897 RRKRIALSMK 906 Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 151/417 (36%), Positives = 218/417 (52%), Gaps = 50/417 (11%) Query: 19 EQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS 78 + V A + LL+EG T+PFI+RYRKE TGGLD+ Q+ ++ L+EL +R++ IL++I Sbjct: 59 QSVSAVLTLLNEGCTIPFISRYRKERTGGLDEVQITDISELYDRLKELGKRKETILRTIR 118 Query: 79 EQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSD----- 133 EQ KLT +L I A + TELED+YLPYKPKRRTR QIA E GLEPLA + + Sbjct: 119 EQEKLTPELEAKILACMDSTELEDIYLPYKPKRRTRAQIAREQGLEPLALAIMREAQKPT 178 Query: 134 -PSHTPE-----VAAAQYVYADK-----------------GVADTKAALDGARYILMERF 170 P PE +A+ Y + G + ALD I+ E Sbjct: 179 APPDLPEGGGDKLASILQKYQGRAKESLSSRVRIGTPPLSGRSGGALALD----IIAEIV 234 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEE--EGAKFRDYFDHHEPLSTVPSHRALAMFR 228 +E+ VR + A + S V+ ++ E KF DYFD EPL SHR LAM R Sbjct: 235 SENQQARNTVRTAYQRGAVITSKVIKKMKDTDEAQKFADYFDFSEPLRRCNSHRLLAMRR 294 Query: 229 GRNEGVLQLSLNADPQFDEPPKESYCEQIIMDH--LGLRLNNAPADSWRKGVVSWTWRIK 286 G ++G+L++S+ D E Q + H ++ A DS+++ + Sbjct: 295 GEDQGILRVSITID---GEECIARLTRQFVRGHGVCQTLVSQAVEDSFKRLINPS----- 346 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 +E E + RA++EAI VF NL LL++ P G + + LDPG G K+A +D Sbjct: 347 ----IENEFAALSKGRADEEAIKVFTENLRQLLLSPPLGQKRVLALDPGFANGCKIACLD 402 Query: 347 ATGKLVATDTIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV 401 G L+ + IYPH Q +A + + +N+E +AIGNGTASRE++ F ++ Sbjct: 403 EQGNLLHHEIIYPHPPRNQVRQATEALQRMINTYNIEAIAIGNGTASRESKEFVENI 459 >UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7_HUMAN Length = 514 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 200/519 (38%), Positives = 277/519 (53%), Gaps = 77/519 (14%) Query: 266 LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 L N+ DS+++ + R E + AE E++ +F RNL LL+ +P Sbjct: 4 LYNSLNDSFKRLIYPLLCR---------EFRAKLTSDAEKESVMMFGRNLRQLLLTSPVP 54 Query: 326 LRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAI 385 R MG+DPG + G K+A++ T +++ TD +Y H GQ + A + L N V I Sbjct: 55 GRTLMGVDPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVI 114 Query: 386 GNGTASRETERFYLDV--QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGA 443 GNGTA RETE ++ D+ + F + IVSEAGAS+YS S A +E P LD +LR A Sbjct: 115 GNGTACRETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSA 174 Query: 444 VSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV 503 VSIARR+QDPLAELVKI+PK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S Sbjct: 175 VSIARRVQDPLAELVKIEPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSE 234 Query: 504 PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH----- 558 LL +AGL A+NI+ WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 235 VLLRHIAGLNANRAKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFIRINQDYIRT 294 Query: 559 -------------------------------------------GDNPLDASTVHPEAYPV 575 NPLD + +HPE+Y + Sbjct: 295 FCSQQTETSGQIQGVAVTSSADVEVTNEKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDI 354 Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTD----EKFG------VPTVTDIIKELEKP 625 R L++ L ++ E++ K + F + EK V T+ II L +P Sbjct: 355 AMRFLSSIGGTLYEV--GKPEMQQ-KINSFLEKEGMEKIAERLQTTVHTLQVIIDGLSQP 411 Query: 626 -GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 D R +F F + + DLQ G +L G V N T FG FVDIGV + GL+ I +++ Sbjct: 412 ESFDFRTDFDKPDFKRSIVCLEDLQIGTVLTGKVENATLFGIFVDIGVGKSGLIPIRNVT 471 Query: 685 ----NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +K + + G+ V+V+VL +D+ R RI L + Sbjct: 472 EAKLSKTKKRRSLGLGPGERVEVQVLNIDIPRSRITLDL 510 >UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS Length = 528 Score = 328 bits (842), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 208/538 (38%), Positives = 298/538 (55%), Gaps = 38/538 (7%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + D +A E+ R QV A LL EG TVPFIARYRKE LD+ +R+ E Sbjct: 13 VQEDELAERVARELHIRTAQVTAVRSLLKEGCTVPFIARYRKEAHHCLDEVLIRDCERLF 72 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 E RR I++++ ++G LT L + + + + LEDL+ P+K K++TRG AIE Sbjct: 73 HTHLARETRRLEIIRAVFKEGMLTPTLYEHLRSAPTLAALEDLWAPFKKKKKTRGMQAIE 132 Query: 121 AGLEPLADLLWSDPSHTPEV------AAAQYVYADKGVADTKAALDGARYILMERFAEDA 174 GLEPLA L+ + + E+ A +D+ V+ + A+ GA IL E A Sbjct: 133 KGLEPLARLIETQCATQAEIERAAAALVAPAADSDRAVSSAQDAIAGACDILAEETAHCN 192 Query: 175 ALLAKVRDYLWKNAHLVSTVVS-GKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 A A ++ + + +T + + ++ Y+D+ E + + +HR LA+ RG EG Sbjct: 193 ANRAALKSFYLSAGVVTATGIGDAHAAHTSVYQMYWDYAEAVRDIKAHRVLAINRGEREG 252 Query: 234 VLQLSLNAD-----PQFDEP--PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 +L + + D Q E P Y I D G+ +PA Sbjct: 253 ILDVKITVDLDAAVEQVQEAVHPNNRYHRDAITD--GVVRLLSPA--------------- 295 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 VL + +L + AE INVF+ NL +LLM P +G+DPG+RTG K A +D Sbjct: 296 VLREIRADLTAS----AEQHGINVFSENLTNLLMTQPVKGTRVLGIDPGIRTGTKCAALD 351 Query: 347 ATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFP 406 TG+ + + IYPH A+AA+T A +++ ++LVA+GNGT S + + + Sbjct: 352 ETGQYLGSFVIYPHNTDHARAALTQA--LDRYRIQLVAVGNGTGSHAVQELIASIISETH 409 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIG 466 A V V E GASVYSA ++A +EFPDLD+++RGA+SI RRLQDPLAELVKIDPKSIG Sbjct: 410 SAVAFTV-VEEDGASVYSAGDIAREEFPDLDLTIRGAISIGRRLQDPLAELVKIDPKSIG 468 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWR 524 VG YQHDV+Q +L+ +L AVV+ VN+VGV+LNTASV LL V+G+ +A+ IV R Sbjct: 469 VGLYQHDVNQKKLSEELHAVVDAVVNSVGVNLNTASVSLLKHVSGVNSALAKRIVHHR 526 >UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersinia pestis D182038 RepID=D0JXD7_YERP1 Length = 264 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 160/201 (79%), Positives = 171/201 (85%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ RIIA E+QARPEQV +A+RLLDEGNTVPFI+RYRKE+TGGLDD QLR LE+RL Sbjct: 1 MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLG 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLRELE+RRQ ILKSI +QGKLTD LA AINATLSKTELEDLYLPYKPKRRTRGQIAIEA Sbjct: 61 YLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+ LW DP PE A YV ADKGVADTKAALDGARYILMERFAEDA LLAKVR Sbjct: 121 GLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDGARYILMERFAEDATLLAKVR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEG 202 YLWKNAHLVS VV K + Sbjct: 181 QYLWKNAHLVSKVVEVKSRKA 201 >UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q3H7_IXOSC Length = 765 Score = 323 bits (827), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 238/763 (31%), Positives = 381/763 (49%), Gaps = 71/763 (9%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 ++ + AR + V V +L + T+PFIARYR+E TGGL +L+N++ L ++++ Sbjct: 13 VSASVNARVDVVRNVVDMLQKDCTIPFIARYRREQTGGLQADELQNIQQTYQSLLSVKKK 72 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLAD 128 Q +L ++++ K + K I + S EL+ ++ PYK K ++ Q A GLE A+ Sbjct: 73 AQTMLAHLAKEEKGDATVKKLIISAKSLEELDHIFAPYKEAKGKSLAQRAKLLGLEDSAN 132 Query: 129 LLWSD-------PSHT---PEV-------AAAQYVYADKGVADTKAALDGARYILMERFA 171 + P T PEV +++ + + V T+ L G R + R + Sbjct: 133 RILQGQTTVEALPPETLVKPEVKGNLELSGSSEKLSSLSPVKTTEWGLKG-RDPWLVRMS 191 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA--KFRDYFDHHEPLSTVPSHRA---LAM 226 + ++ + GK+++ A K+ +Y + + +V ++A LA+ Sbjct: 192 KSPGIMLTATKSSSAAKKAKEALTEGKQQDHADKKYDNYINFSRDVRSVQPYQARSVLAI 251 Query: 227 FRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 RG ++ +L + + P F + ++C + + G ++ V R+ Sbjct: 252 NRGESQKMLTVKVVLPPSFPVSVR-NFCASRVREQ-GAKMYGGTLRLVESAVEDAYSRL- 308 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 + HL + T+ + AE E++NVF NL LL+ P A +G+DPG + G K+A V Sbjct: 309 LEPHLIRSIRSTLTKVAEQESVNVFRSNLRQLLLTPPVRGHAVLGIDPGFKHGCKLAAVS 368 Query: 347 ATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDV--Q 402 A+GKL+ I+PH A++ A + L HN +L+A+GNGTA RETE F ++ Q Sbjct: 369 ASGKLLQHSVIHPHASPASRYSAGNILRQLVVTHNCDLIALGNGTACRETEAFLSELISQ 428 Query: 403 KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDP 462 + F V + + E+GAS+YS ++ A E P LD ++R AV IARRLQDPL E VK++P Sbjct: 429 RAFMPVPVKFCTIDESGASIYSVTKEAEAELPGLDPNIRSAVGIARRLQDPLLEYVKVEP 488 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVA 522 K +GVG YQHD+S++ L L+ VV +CV+ VGVD+N +L +V+GL A+NIV Sbjct: 489 KHLGVGMYQHDISESVLKNALEGVVVECVSFVGVDINVCPETILRKVSGLNAGTAKNIVD 548 Query: 523 WRDENGQFQNRQQLLKV--------------SRLGPKAFEQCAGFLRINHGDNPLDASTV 568 WR+ +G F+NRQQLL + R G Q +++ +PLD + + Sbjct: 549 WRETHGPFKNRQQLLSLQSVTNENKVCFHLFQRNGSSVPAQKQKSKKVSDEFDPLDMTII 608 Query: 569 HPEAYPVVERILA---------ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDII 619 HPE+Y E ++ Q ++ + SS L A V+ I Sbjct: 609 HPESYRFAELLICHLKLKKEDIGKQHFIETVKRESSRLGEHMAGTVRALAVQALPVSVIF 668 Query: 620 KELEKPGRDPRPEFKTAQ-----FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 +E P P F + F GV ++++++ G L G V N T FGAFVDIGV + Sbjct: 669 LYIE-----PGPAFLLTEQHQPLFKSGVVSLDEIEVGQELTGKVKNCTQFGAFVDIGVGK 723 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 DGL+H S ++ V GD V V V+ ++ R RI L Sbjct: 724 DGLIHCSQMNGHR-------VNLGDRVTVLVVNLERSRGRIGL 759 >UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B1A Length = 349 Score = 317 bits (811), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 167/278 (60%), Positives = 209/278 (75%), Gaps = 5/278 (1%) Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + N L S VVSGK++EG KF DYFD+ E + +PSHRALA+FRGRNEGVL L L + Sbjct: 2 NQMQNNGILSSQVVSGKQQEGKKFSDYFDYAEAIGKIPSHRALALFRGRNEGVLNLHLGS 61 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 EP S CE II G+ AD+W V W WRIK+ + LE EL+ +RE Sbjct: 62 GEAEGEP---SICESIIAASQGIAQQGRAADAWLTETVRWAWRIKLSLKLELELLAQLRE 118 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RAE+EAI VFA NLHDLL+AAPAG +AT+GLDPGLRTGVKVA++D TGK+VATDTIYPH Sbjct: 119 RAEEEAIRVFASNLHDLLLAAPAGPKATIGLDPGLRTGVKVAMIDTTGKVVATDTIYPHA 178 Query: 362 --GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q ++ T+AA+ ++++ ELVAIGNGTASRET++ ++ K+ P++ QK++VSEAG Sbjct: 179 PKKQWDRSIATLAAMAKQYSAELVAIGNGTASRETDKLTAELIKKHPELKLQKLMVSEAG 238 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL 457 ASVYSASELA++E P+LDVSLRGAVSIARRLQDPLAEL Sbjct: 239 ASVYSASELASKEMPELDVSLRGAVSIARRLQDPLAEL 276 >UniRef50_Q4DZK1 Transcription modulator/accessory protein, putative n=4 Tax=Trypanosoma RepID=Q4DZK1_TRYCR Length = 986 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 229/706 (32%), Positives = 354/706 (50%), Gaps = 56/706 (7%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + + RII + P V +G+TVPF+ARYR++ TG LD+ LR L Sbjct: 40 IAQERLYRIIGARMSISPAIARFVVEQTKKGSTVPFLARYRRDETGHLDEKALRQLIDMA 99 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 L+E++ RR +LKS+ +G LTD+L +A + L +LED + P+K K+ + E Sbjct: 100 EELQEVQRRRAFMLKSLKSRGLLTDELREAFDKLLHLNQLEDAWEPFKEKKTSLSYRGRE 159 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKG------VADTKAALDGARYILMERFAED- 173 AGLEPLA L +V+ D + + D R +++ + Sbjct: 160 AGLEPLAKKLLYTSEPLTDVSEKLRSVKDGAKLFQAIIVEEVQRCDEVRQLMLAECRQSG 219 Query: 174 ---AALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGR 230 ++L A R KNA + T E KF Y + + + +H LA+ RG Sbjct: 220 VISSSLAAAPRK---KNAKEIGT--DAFETLKKKFAAYENRRWSVQRISAHNVLALQRGE 274 Query: 231 NEGVLQLSLNADPQ-----FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRI 285 ++GVL + + + F ++ Q D RL N ++ + ++ T I Sbjct: 275 SKGVLLVKMIPHSRSKYTFFSWARRKFVGFQRREDPKATRLLNQCLEAAYENIMKATHNI 334 Query: 286 KVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVV 345 + +++ AE EAI VFA +L +LM P + +DPG+ GVK + Sbjct: 335 ---------IRRDLKKSAEKEAITVFAHSLRHILMQCPMRNARILAMDPGVTKGVKCVAL 385 Query: 346 DATG------KLVATDTIYPHTGQAAKAAMT--VAALCEKHNVELVAIGNGTASRETERF 397 D G K + D KA M ++ +K + + IGNGTASRE Sbjct: 386 DENGGVLTRFKCIIMD----------KANMRDYISGCVDKLKLNKIVIGNGTASREVADI 435 Query: 398 YLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL 457 D ++ ++ + IVSEAGASVYS S++A +EFP LD RGAVSI RR+ DPL+EL Sbjct: 436 VADTIEE-RGLSVEYAIVSEAGASVYSVSDVAREEFPTLDPMYRGAVSIGRRVIDPLSEL 494 Query: 458 VKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMA 517 VKI +S+G+G YQHD+S+ +L R L+ VVE CV VGV+ ++ ++ ++ G+T+ + Sbjct: 495 VKIPVRSMGIGMYQHDISEMELLRALNRVVESCVTCVGVNALISNRYVMEKIPGVTKSIV 554 Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 IV R + ++R+ L +V + ++Q AGF R + NPLD + +HPE+Y V+ Sbjct: 555 DQIVLARYAK-KLKSREDLRRVPGMTEVTYQQVAGFFRFPNSTNPLDNTNIHPESYSTVQ 613 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEK----FGVPTVTDIIKELEKPGRDPRPEF 633 ++L + + +GN L NL+ ++ D G T+ + +EL P DPR E Sbjct: 614 KLLELYEGKERREVGNI--LLNLRDAELRDVASRIGCGEATLELVARELASPALDPRSEL 671 Query: 634 KTAQ-FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 A F + DL+PG +L G V +VT FGAFVD+G+H + LV Sbjct: 672 PHAGIFRRFPPKLADLKPGDMLRGIVQSVTTFGAFVDVGLHDNVLV 717 >UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SQL1_TETNG Length = 613 Score = 315 bits (808), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 219/622 (35%), Positives = 313/622 (50%), Gaps = 116/622 (18%) Query: 198 KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYC--- 254 K+++ KF+ YFD + + H+ LA+ RG + +L + +N P + S+C Sbjct: 3 KDKDIDKFQLYFDFTCNVQRIQPHQTLAINRGESLKILTVKVNI-PDRVKSDFSSWCINS 61 Query: 255 ---EQII--MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 +II +H L + NA DS+++ V+ + R T+L AE E+I Sbjct: 62 RWRPKIIPKAEH-QLIIKNAVEDSYKRLVLPFLTR-----SYRTKLTAA----AEKESIA 111 Query: 310 VFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAM 369 +F RNL L+ P MG+DPG + G KVA++ T +++ TD +Y H A Sbjct: 112 MFVRNLRQRLLVGPVRGSVIMGVDPGYKHGCKVAILSPTSQILHTDIVYLHHSSQQSQAD 171 Query: 370 TVAALCEKHNVELVAIGNGTASRETERFY-----------LDVQK--------------- 403 + L K++ + IGNGTA RETE ++ LDV Sbjct: 172 KLRHLIVKYSCTRIVIGNGTACRETEAYFSQLISRRLFHPLDVSYWTAQDYRHVALHQEA 231 Query: 404 --QFPKVTAQKV------IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLA 455 F V + I +EAGAS+YS S A +E P+LD +LR AVSIARR+QDPLA Sbjct: 232 SIDFETVRVHDLTILPLSITNEAGASIYSVSPEAVKEMPELDPNLRSAVSIARRVQDPLA 291 Query: 456 ELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRM 515 ELVKIDPK IG+G YQHDVS + L LD VV++CV+ VGVD+N S L+ VAGL Sbjct: 292 ELVKIDPKHIGIGTYQHDVSSSALKAALDGVVQECVSFVGVDINMCSETLMRHVAGLNAG 351 Query: 516 MAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN------------------ 557 A++I WR++NG F NR+QL V +GPK ++QCAGF+RIN Sbjct: 352 RARSIAEWREQNGPFINREQLKLVKGMGPKTYQQCAGFIRINPQTSVLFFFFVFSNSANS 411 Query: 558 -----------------------HGDNPLDASTVHPEAYPVVERILAAT----------- 583 NPLD + +HPE+Y VV+R L+ Sbjct: 412 SLPQVPENPAAKKGKGKACVKVSTSFNPLDQTCIHPESYHVVQRFLSIVGGRADPIGSPR 471 Query: 584 -QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL-EKPGRDPRPEFKTAQFADG 641 +Q ++D + +SS + +D + E T+ II L + PG D R F A F G Sbjct: 472 LRQRVEDKVRSSSVEELARTADTSPE-----TLKLIIDGLTQPPGFDIRQNFGQADFKQG 526 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH----TVVKA 697 + +M+DL+ G +L G V N FGAFVDIGV + GL+H S+++ + + Sbjct: 527 IVSMSDLRVGAVLTGRVDNTALFGAFVDIGVGRSGLIHKSNITPDKLPISQRRRSLALGP 586 Query: 698 GDIVKVKVLEVDLQRKRIALTM 719 G+ V+V+VL VD QR RI L + Sbjct: 587 GERVEVRVLNVDHQRGRIGLDL 608 >UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S0I4_TRIAD Length = 796 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 241/803 (30%), Positives = 374/803 (46%), Gaps = 111/803 (13%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + + +A QA V A+ LL EGNTVPFI RY+ + G++D ++ + Sbjct: 14 YIKRLAQRYQANEVAVKNAIALLREGNTVPFIVRYKSSMIQGINDINIQQIRNDYEDFIL 73 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA---G 122 L+E + + + + G LT L + ++ S E+++L +K G +A A G Sbjct: 74 LQEESKKLKTRLQKSGALTLQLEQELDRAESVEEIKELAKQFKTT--PTGSLADRAKKLG 131 Query: 123 LEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKVR 181 L+ LA LL + +V ++ D +G+A + +G ++IL A+++ R Sbjct: 132 LDKLATLLLEN--KIDQVNFKSWIKRDTQGLASIEEIQNGVKHILANVIAKNS----NCR 185 Query: 182 DY---LWKNAHLVSTVVSG---KEEEGAKFRD----YFDHHEPLSTVPSHRALAMFRGRN 231 Y L+KNA + S + S ++ F + Y + ++ V H+ LA+ RG Sbjct: 186 SYVGKLFKNAEITSFLSSTTIKQQMHNPSFDNVLERYSNFQRKVTHVLPHQVLALNRGER 245 Query: 232 EGVLQLSLNADPQFDEP-------------PKESYCEQIIMDHLGLRLNNAPADSWRKGV 278 E +L + + AD + E PK E+I N A D++ Sbjct: 246 EKILTVKIKADFKAQEKFCTWARNEIFPFVPKRKDVERI--------FNEATKDAF---- 293 Query: 279 VSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRT 338 V + + +A+ A+++F +NL +L+ + +G+DPG + Sbjct: 294 VRLLQPAEERRIRVVIARRNLTCQAQKAAVSIFTQNLRRMLLTPSVSGKVILGIDPGYKN 353 Query: 339 GVKVAVVDA----TGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRET 394 G K+A++D TG+++ IY H + ++A T+ L + L+AIGNG A R+ Sbjct: 354 GCKLAIIDKLGVITGEVLHATIIYIHDARISEAEATLVNLVQGFKCSLIAIGNGCACRDV 413 Query: 395 ERFYLDVQKQ----FPKVTAQKV---IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIA 447 E ++ + F KV K+ V+E+G+S YS SEL E P L +LR AVSIA Sbjct: 414 ETLLSNLTSRRAFNFQKVKYCKMSFSFVNESGSSWYSISELGRAELPKLMPNLRSAVSIA 473 Query: 448 RRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLT 507 RRLQ+PLAE+ K++PK +GVG YQHD+ L + + V+E CV+ VG+D NTA V +L Sbjct: 474 RRLQNPLAEMTKVEPKHLGVGMYQHDIPDKLLEKAVKGVLEACVSFVGIDCNTADVTMLQ 533 Query: 508 RVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG-------- 559 VAGL A+ IV +R ENG NR+QL K+ +GPK FEQCAGFLRIN Sbjct: 534 HVAGLNLKCAKAIVEYRKENGPLCNREQLKKIKGIGPKTFEQCAGFLRINPASYEENLSN 593 Query: 560 --------------------------------DNPLDASTVHPEAYPV---VERILAATQ 584 N LD + +HP+ YP R L AT Sbjct: 594 YTSLTVSTSSGKRKISTDSSIVARKKQRIIAESNKLDMTIIHPDNYPSALKFLRYLGATM 653 Query: 585 QALKD--LMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL-----EKPGRDPRPEFKTAQ 637 + D L+ + N+ + + G+ +D+ K L + D R ++ Sbjct: 654 DDIGDQKLIEKVTLQLNIPGFEALQKCLGID--SDVFKNLCDALQQNLDFDIRSDYDEPV 711 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 F + ++ + G IL G V NVT FG FVD G+ DG++ I E + Sbjct: 712 FRSSIISLQSIVNGTILTGCVRNVTTFGIFVDCGLGTDGMIRIGEEVITQSESEKRPLGP 771 Query: 698 GDIVKVKVLEVD-LQRKRIALTM 719 GD VKVKV V + KRI L + Sbjct: 772 GDRVKVKVKRVSGVNNKRILLEL 794 >UniRef50_Q4QH24 Transcription modulator/accessory protein, putative n=3 Tax=Leishmania RepID=Q4QH24_LEIMA Length = 1082 Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 223/715 (31%), Positives = 348/715 (48%), Gaps = 74/715 (10%) Query: 30 EGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAK 89 EG TVPF+ARYR+ TG +D+TQLR + + E+ RRQ +L+S+ +G LT L Sbjct: 131 EGATVPFLARYRQGETGRMDETQLRLVMDTAKEVAEVHRRRQFMLRSLESRGLLTPALQT 190 Query: 90 AINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD 149 A+ + + ++LED + PYK +R + AGL P AD L P+ A D Sbjct: 191 ALESMVHVSQLEDAWEPYKERRTSLASRGRAAGLGPYADALLHFNPDDPDCKA----RLD 246 Query: 150 KGVADTKAALDGARY---ILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK-- 204 + A + +G R I+ E L ++ +Y A L ST+++ ++ AK Sbjct: 247 ELSAFVRRTDEGERLLTAIVAEDVQRSEVLRRRLGEYCRHTARLSSTLMAKPRKKAAKEL 306 Query: 205 -------FRDYFDHHE----PLSTVPSHRALAMFRGRNEGVLQLSLNADPQ----FDEPP 249 R +F +++ + V +H LA+ RG +G L++ + P+ F Sbjct: 307 HEESFEALRKHFAYYDNKSWSVQRVAAHVVLALQRGEAKGALKVDTGSGPKSHGLFMHTV 366 Query: 250 KESYCEQI-----------IMDHLGLRLNNAPADSWRKGVVSWTWRI---KVLMHLETEL 295 +E Y D G + + + +V + ++ + Sbjct: 367 REQYPSLNRLLSLSSSSVPTADGAGAYSHVFRDFGYGRKIVHAGLQAAYDHIIKQAHFAI 426 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 +++ AE EAI VFA NL +L+ P + +DPGL GVK +D G A + Sbjct: 427 RRDLKKSAEQEAIVVFAHNLQHMLLQRPLSRSRILAMDPGLANGVKCVALDENG---AVE 483 Query: 356 TIYPHT-GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 T + T K V + E + + IGNGTAS D+ KQ + + Sbjct: 484 TFFTCTLMDEQKMRRYVIQVVESRKLNKIVIGNGTASGRVTDLIADLIKQQKWTDVEFAV 543 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 VSEAGASVYS S++A +EFP+LDV RGAVSI RR+ DPL+ELVKI +S+G+G YQHDV Sbjct: 544 VSEAGASVYSVSDIAKEEFPNLDVMYRGAVSIGRRVLDPLSELVKIPVRSMGIGMYQHDV 603 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 ++ +L R+L V+E CV VGV+ +A+ ++ +V G+ + + IV R + +R+ Sbjct: 604 NEKELMRELSYVLESCVAKVGVNAASANRYVMEKVPGIKKRIVDQIVLARHAK-KLHSRE 662 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERIL---AATQ----QAL 587 L +V + +EQ AGF R + PLD +++HPE+YP+V R++ A Q +A+ Sbjct: 663 DLRRVPAMTESVYEQIAGFFRFPNSPEPLDNTSIHPESYPLVRRLVTFYTAGQLGDGEAM 722 Query: 588 KDLMGNSSE---------------------LRNLKASDFTDEKF--GVPTVTDIIKELEK 624 + GN+++ + + + EK V T+ + +EL Sbjct: 723 AEKPGNAADGAATTLGDAHIRQQVAQQLERMSPAQLASLATEKLSCSVETLELLRQELLH 782 Query: 625 PGRDPRPEFKTAQ-FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 PG DPR A V + +L+ G +L G V +VT FGAFVD G+H L+ Sbjct: 783 PGLDPRASLPHAGLLRRDVCDVQNLRSGELLSGVVQSVTMFGAFVDCGLHDSVLL 837 >UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ79_9PLAN Length = 1043 Score = 293 bits (751), Expect = 1e-77, Method: Compositional matrix adjust. Identities = 161/381 (42%), Positives = 227/381 (59%), Gaps = 15/381 (3%) Query: 205 FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL 264 F+DY+D+ EP+S +P HR LA+ RG +++ + D +D + I DH Sbjct: 323 FKDYYDYREPISKIPHHRVLAINRGDRTRFIRVKIECD--WDRLFALAEETAIPADH--- 377 Query: 265 RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 + D + + R+ +L LE E+ + E AE+ A++VFA NL LL+ P Sbjct: 378 ----SQTDFLKPCLRDGLQRL-MLPSLEREIRRELTEHAEEHAVDVFACNLRKLLLQPPV 432 Query: 325 GLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY---PHTGQAAKAAMTVAALCEKHNVE 381 R M +DPG R+G K+ +D G ++ I+ P + A+ + + +H V+ Sbjct: 433 SSRRVMAIDPGFRSGCKLVALDQFGSILEQGVIHLIGPE-DRVARGRQRLIEMIRQHAVD 491 Query: 382 LVAIGNGTASRETERFYLDV-QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSL 440 +VAIGNGTA RETE + K VIV+EAGASVYS SEL +EFPD D ++ Sbjct: 492 IVAIGNGTACRETENLVASIISKDITDREVVYVIVNEAGASVYSTSELGREEFPDFDATV 551 Query: 441 RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT 500 RG +SI RRL DPL+ELVKI+P +IGVG YQHDV L LD VVE CVN VGVD+N Sbjct: 552 RGTISIGRRLLDPLSELVKINPSNIGVGLYQHDVKSKHLKETLDNVVESCVNYVGVDVNQ 611 Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS LL+ V+GL ++ A+ + +R +NG F +R++ KV+ G AF Q AGFL+I G+ Sbjct: 612 ASPALLSYVSGLNQLTARRLYEYRRQNGPFTSREEFKKVAGFGESAFVQAAGFLKIRDGE 671 Query: 561 NPLDASTVHPEAYPVVERILA 581 NPLDA+ +HPE+Y V E++LA Sbjct: 672 NPLDATWIHPESYEVAEKVLA 692 Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 6/207 (2%) Query: 9 IIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEE 68 I+A E+ +QV V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ R + LR+LEE Sbjct: 11 IVARELGLPVDQVQRTVELLDDGNTVPFITRYRKDETGGLDEEQIRKIQARSAALRQLEE 70 Query: 69 RRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAD 128 R+Q ILKSI QGKLT+ LA I + LEDLYLP+KPK+++ A + GLEPLAD Sbjct: 71 RKQTILKSIESQGKLTEKLADKIQKAPTTKLLEDLYLPFKPKKQSLATQARQRGLEPLAD 130 Query: 129 --LLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWK 186 + ++ + AA +V A+ + D A L G R+IL E FAE+A L ++R +WK Sbjct: 131 EVMAGNEAAADLPARAAAFVSAENDLPDVAAVLQGVRHILAEEFAENAILRGRLRKLMWK 190 Query: 187 NAHLVSTVVSGKEEEGAKFRDYFDHHE 213 LV+ + E+ A D DHH+ Sbjct: 191 TGTLVTLRI----EQAADASDEKDHHD 213 Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 9/163 (5%) Query: 600 LKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + A +F E + G DI+ L +PGRDPR +F F G+ + DL+PGM L G V Sbjct: 822 VSAPEFAAELEVGEHLTRDILNSLSRPGRDPRADFPPPLFRRGIMKLEDLRPGMELSGTV 881 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 NV +FGAFVDIG+H G+VHIS L+N++V DPH VV GD++ V V+E+D R+R++LT Sbjct: 882 LNVVDFGAFVDIGLHDSGMVHISRLANRYVSDPHEVVSVGDVITVWVVEIDKDRRRVSLT 941 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPA-AK--PRGREAQPAGN 758 +PG T +E+ + +RP AK PRG+ +P GN Sbjct: 942 AI---EPG-TEKAIPAADEKQRVDRPERAKRPPRGKN-RPGGN 979 >UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory protein (S1 rna binding domain) n=1 Tax=Schistosoma mansoni RepID=C4QCZ5_SCHMA Length = 873 Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 195/593 (32%), Positives = 302/593 (50%), Gaps = 71/593 (11%) Query: 21 VDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQ 80 V + + + G TVPFIARYRKEITGG + T L L+ +++ + L ++ + L+ + Sbjct: 20 VSRVIPMFENGYTVPFIARYRKEITGGAEPTVLHRLKEKMNDCKMLVDKIEKSLQFFDKS 79 Query: 81 GKLTDDLAKAINATLSKTELEDLYLPYKPKR-RTRGQIAIEAGLEPLA-DLLWSDPSHTP 138 G LT++L++ + + +++ L P+K K RT A LEP+A D+L S+ Sbjct: 80 GLLTNELSQQLMKCKTTEDIKLLGNPFKSKGPRTLAGRAKAVNLEPIALDILHSN--RCV 137 Query: 139 EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK 198 ++ + A K A D +I+ + FA+D ++ K + K ++ + V + K Sbjct: 138 DMYSLAPPEAKKTFTSKTALEDAVSHIIADIFAKDLDIIRKAEELCSK--YIATLVTAKK 195 Query: 199 EEEGAK--------------------------------------------------FRDY 208 + G K F++Y Sbjct: 196 SKRGKKVEQSSGGNLPNSMSIDFDENENADDAECIQNSHSSMNNTNNNSKKDDLVTFKNY 255 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN 268 + P+S++ +H+ LA+ R GV+ + ++ PQ + C + N Sbjct: 256 LNFSRPVSSILAHQVLAINRANERGVITVKIHLSPQV-----QHNCATFVSQKYFPTTNR 310 Query: 269 APADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR- 327 D + + W+ + HL + + A+D ++ VF+ NL LLM AP R Sbjct: 311 IHWD-FVMSAFNDAWKRLIDPHLVRSIRTKLTTSAQDASLEVFSENLRRLLMTAPLRDRL 369 Query: 328 ATMGLDPGLRTGVKVAVVDATGKLVATDTIYP-HTGQAAK-AAMTVAALCEKHNVELVAI 385 +GLDPG R G K A D G +++T ++P HT A ++V +N A+ Sbjct: 370 PVIGLDPGWRNGCKWAACDPHGNVLSTGILWPPHTLSAIPPKKLSVQNGPMSNN----AL 425 Query: 386 GNGTASRETERF--YLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGA 443 GNG SR+T + YL + F + + +VSE GAS YSAS++A E PDLDVS RGA Sbjct: 426 GNGQGSRQTGSWLAYLIQIQHFKPLNVRYAVVSECGASYYSASKVACTELPDLDVSFRGA 485 Query: 444 VSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV 503 VSIARRLQDPLAELVK++PK +GVG YQHD+ QL + V+E+C++ VGVDLN A + Sbjct: 486 VSIARRLQDPLAELVKLEPKHLGVGMYQHDIPVNQLTSAVHNVMEECISFVGVDLNAAPL 545 Query: 504 PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 +L+RVAGL+ M A+ I+ +R + G F++R LLKV +G F QCAGF+R+ Sbjct: 546 HILSRVAGLSEMKAKAILTYRSQVGPFRSRADLLKVKGIGQATFAQCAGFVRV 598 Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 34/191 (17%) Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNS----------SELRNLKASDFTDEKF 610 NPLD + VHP++Y V I++ Q L D+ SE R+ + F + Sbjct: 676 NPLDQTAVHPDSYEVAANIISLLQLNLTDVGSMKMRTAATQFMISEDRDKRLEQFCSKTV 735 Query: 611 GVPTVTDIIKELEKP-GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 G+ T+ DI+ L +P D R + T F V ++DL+ GM ++G V NVT FGAF D Sbjct: 736 GLDTLRDILVALTRPLDFDERQDCFTPLFHSTVMKISDLRKGMQVKGRVENVTTFGAFCD 795 Query: 670 IGVHQDGLV-------HISSLSNKFVEDPHT----------------VVKAGDIVKVKVL 706 IGV ++ + + S+ + K + T ++ GD +K V Sbjct: 796 IGVEENAYIPRHEYPRNCSTSNLKIASETSTTGIGVSDGGDIHHKMFTLRLGDRIKATVS 855 Query: 707 EVDLQRKRIAL 717 VD++ KR+AL Sbjct: 856 GVDIKYKRVAL 866 >UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692A0D Length = 446 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 157/407 (38%), Positives = 234/407 (57%), Gaps = 19/407 (4%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 I+ E+ P +V A LLDEGNT+PFIARYRKE+TG +D+ QLR++E RL YLR LE+R Sbjct: 52 ISTELALTPGKVKTATALLDEGNTIPFIARYRKEMTGEMDENQLRSIEERLQYLRNLEDR 111 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 + +++ I EQGKLT +L AI + ++EDLY PY+ KR+TR +A E GLEPLA Sbjct: 112 KLEVIRLIDEQGKLTAELHSAIEQAVKLQDVEDLYRPYRQKRKTRASVAKERGLEPLAGW 171 Query: 130 LWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 + P + A +Y+ DKG+ A+ GA I+ E A++A + A VR Y ++ Sbjct: 172 MLKQPKQGSLAEEAEKYINEDKGILSAADAVQGAMDIIAENIADNAKVRAWVRKYT-RDE 230 Query: 189 HLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 + T E+E + Y+ + EP+ +P HR LA+ RG EG L+++L P Sbjct: 231 GIFRTEAKDAEQESV-YEMYYAYDEPVKRMPPHRILAINRGEREGFLKVNLEVAPDR--- 286 Query: 249 PKESYCEQIIMDHLGLRLNNAPA--DSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDE 306 I ++G +L P+ + + VV ++ + +E E+ G + ERAE+ Sbjct: 287 ---------IHQYMGRQLIQGPSVVQNELEEVVQDAYKRLISPSIEREVRGEMTERAEEH 337 Query: 307 AINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH--TGQA 364 AI +FA NL +LL+ P + +G+DP RTG K+AVVD TGK++ YP + Sbjct: 338 AITIFAANLRNLLLQPPVRGKTVLGVDPAFRTGCKLAVVDETGKMLEIAVSYPTPPYSKV 397 Query: 365 AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQ 411 +A + L ++H VEL+ IGNGTASRETE+F D+ ++ + Q Sbjct: 398 EEAKTILKQLIQRHGVELIVIGNGTASRETEQFVADLIREMKEANLQ 444 >UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZJ0_9PLAN Length = 1147 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 153/391 (39%), Positives = 224/391 (57%), Gaps = 17/391 (4%) Query: 205 FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMD--HL 262 F+DY+ E + +P HR LA+ RG +++ + AD E + D L Sbjct: 359 FKDYYAFTEAVGRIPPHRILAINRGERARAIRVKIEAD-----------LEAMYRDAEEL 407 Query: 263 GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 +R ++ AD R GV+ ++ LE E+ + + AE A++VF RNL LL+A Sbjct: 408 IVRADHPHADFLR-GVLRDALNRLMVPSLEREIRREMTDFAETHAVDVFIRNLRKLLLAQ 466 Query: 323 PAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY--PHTGQAAKAAMTVAALCEKHNV 380 P R + +DPG ++G K+ +D G ++ IY + KA +A + +++NV Sbjct: 467 PVRGRRVLAVDPGFKSGCKLVALDEFGNVLGHGMIYVIGKDDRRQKAKNRLAEIIKQYNV 526 Query: 381 ELVAIGNGTASRETERFYLDV-QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 ++AIGNGT RETE+ DV + VIV+EAGAS+YS S L +E P D Sbjct: 527 SVIAIGNGTGCRETEQLVADVLSNEVAGRDCAYVIVNEAGASIYSTSPLGREELPQYDAL 586 Query: 440 LRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 RGA+SI RRL DPL+E+VKI+P ++GVG YQHD+ L LDAVVE CVN VGVD+N Sbjct: 587 QRGAISIGRRLLDPLSEMVKINPANLGVGLYQHDMKAKHLKESLDAVVESCVNFVGVDVN 646 Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 +AS LL V+G+ + A+ + +R E+G F NR+ L KV G F Q AGFL+I G Sbjct: 647 SASPALLRYVSGMNALTARRVYEYRREHGPFHNREDLKKVPGFGDATFVQAAGFLKILGG 706 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDL 590 +N LDA+++HPE+Y + R+L +++L Sbjct: 707 ENALDATSIHPESYSIAIRVLEKIGSDVQEL 737 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 84/189 (44%), Positives = 123/189 (65%), Gaps = 2/189 (1%) Query: 9 IIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEE 68 ++A ++ ++++ V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ R++ LR L E Sbjct: 11 LVARDLHLPVDKIERTVSLLDDGNTVPFITRYRKDQTGGLDEEQIREIQDRVTKLRMLAE 70 Query: 69 RRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA- 127 R+ ILKSI QGKLT +LA+ I A + LEDLYLP+KPK++T +A + GLEPLA Sbjct: 71 RKATILKSIESQGKLTPELAEEIQAAPTTKRLEDLYLPFKPKKQTLATVARQRGLEPLAR 130 Query: 128 DLLWSDPSHTP-EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWK 186 ++L +D + T V AA +V D+ + L G ++L ERF+E+A L ++R K Sbjct: 131 EILEADAAATDLLVRAADFVSPDRELNSAAEVLLGVGHLLAERFSENAELRGRLRKIFQK 190 Query: 187 NAHLVSTVV 195 LVST + Sbjct: 191 TGKLVSTKI 199 Score = 115 bits (288), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 8/142 (5%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + G + DI+ L+KPG DPR G+ + DL+PGM L G+V NV +FG FV Sbjct: 876 QIGQHLLEDILATLKKPGLDPRDSLSAPLLRRGIMKLEDLEPGMELSGSVLNVVDFGVFV 935 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 DIG+ GLVHIS L+++++ DPH VV GD++KV V+EVD R+R++LT PG Sbjct: 936 DIGLSDSGLVHISRLADRYIRDPHEVVGVGDVLKVWVVEVDKSRRRVSLTAI---APGSE 992 Query: 729 NARRGGGNERPQNNRPAAKPRG 750 +R P+ R +PRG Sbjct: 993 KPQRP-----PRGERGPRQPRG 1009 >UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=Brugia malayi RepID=A8P3Z1_BRUMA Length = 536 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 174/501 (34%), Positives = 268/501 (53%), Gaps = 69/501 (13%) Query: 224 LAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNA--PADSWRKGVVSW 281 LA+ R ++G++ + D + I H GL+LN D RK V Sbjct: 54 LALERASSKGIINWKIVVD------------DSIASIHPGLKLNFHLNHTDLLRKAVQDS 101 Query: 282 TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVK 341 T R ++ +E ++ + +RAE+ AI+ FA+NL +LL+ AP A + +DPG G K Sbjct: 102 TKRF-LIPSIERKVRRKLLDRAENSAIDCFAKNLRELLLTAPLKDYAVLAIDPGYSNGCK 160 Query: 342 VAVVDATGKLVATDTIYPHTGQAA------KAAMTVAALCEK--HNVELVAIGNGTASRE 393 A+V+ +G L+ T Y A +A + L K ++ ++AIGNGTASRE Sbjct: 161 CALVNDSGDLLQTAVFYFRRLNAKNWCPDERAEEILKTLVSKALNSPFVIAIGNGTASRE 220 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 T+ F + Q + A+ +VSE GAS+YS +ELAA+E +D++LR AVS+ARR+ DP Sbjct: 221 TQVFIASLI-QRGVIAAKFCVVSECGASIYSTTELAAEELSGIDINLRSAVSLARRIIDP 279 Query: 454 LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT 513 ++E VKI PK +GVG YQH V++ +L LD VV +CV+ VGVD+N AS+ +L RV+GL Sbjct: 280 ISEYVKIAPKHLGVGLYQHSVNEKRLDEMLDIVVRECVSNVGVDVNVASLQVLQRVSGLN 339 Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------------- 560 + A NI+ +R +N ++R++L K++ +GPK FE CAGFL + +G Sbjct: 340 KKTAANIIKYRQDNAGIKSREELKKINGIGPKCFEHCAGFLYVYNGKRLNAPAKKKIKLS 399 Query: 561 ---NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 NPLDA+ VHPE+Y + +++ + S + +D T G + Sbjct: 400 KEFNPLDATPVHPESYQIAKQL-------------SISLILEYAGADLT--HIGQNNLYQ 444 Query: 618 IIKELEKPGRDPRPEFKTAQ--------------FADGVETMNDLQPGMILEGAVTNVTN 663 ++ +E+ R+ PE+ + V M L+ G ILEG V N N Sbjct: 445 MLAVIEERIRERGPEWLSVWELLSNPFVRKNAPVLLTNVLEMKSLKVGDILEGVVRNHAN 504 Query: 664 FGAFVDIGVHQDGLVHISSLS 684 FG F+DIGV+ V I++++ Sbjct: 505 FGIFIDIGVNSSVKVRITAIN 525 >UniRef50_UPI00019085B8 probable transcriptional accessory protein (RNA binding S1 domain) n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019085B8 Length = 274 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 134/241 (55%), Positives = 168/241 (69%), Gaps = 2/241 (0%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 I+ EI ARP+Q AA+ LLDEG TVPFIARYRKE+TGGLDDTQLR+L RL YLRELE R Sbjct: 12 ISAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRDLAERLVYLRELEAR 71 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R I++SI+ QGK+TD+L + +K ELEDLYLPYKPKRRTR +IA E GL PLA+ Sbjct: 72 RDTIVESITAQGKMTDELMTKVAGAATKAELEDLYLPYKPKRRTRAEIARERGLGPLAEA 131 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 + ++ P V A ++ AD V D K AL+GAR I+ E AE+A LL ++R ++ + + Sbjct: 132 ILAERGREPAVLAEGFITAD--VTDVKTALEGARDIIAEGIAENADLLGRLRAHMRQASL 189 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 L + VV GK+ G KF DYFDH E +T P HRALAM RG NE VL L++ AD + P Sbjct: 190 LKARVVDGKQAAGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIEADAETLSPN 249 Query: 250 K 250 K Sbjct: 250 K 250 >UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MUJ5_9CHLO Length = 505 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 137/293 (46%), Positives = 176/293 (60%), Gaps = 31/293 (10%) Query: 329 TMGLDPGLRTGVKVAVVDATGKLVATDTIY-----PHT----GQAAKAAMTVAALCEKHN 379 +G+DP RTG K+A VDATG +VAT +Y P G A AA+ A E H Sbjct: 7 VVGVDPAFRTGCKLAAVDATGAVVATGVVYLPGFEPRGARTPGTPAPAALR--AFVEAHG 64 Query: 380 VELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 +AIG+G +RE E+ D +V VSEAGASVYSAS LA +E P LDVS Sbjct: 65 ATAIAIGDGQGTREAEKLVADAN--LGDAVGWRV-VSEAGASVYSASPLAVEELPSLDVS 121 Query: 440 LRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 RGAVSIARRLQDPL+ELVKIDP+S+GVG YQHDV + +LA +L AVVE V GV++N Sbjct: 122 SRGAVSIARRLQDPLSELVKIDPQSLGVGLYQHDVKEAELAGELSAVVESAVAEAGVNVN 181 Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 TAS LL RV GL++ +A I + RD NG F +R LL+V LG K F QCAGFLR++ Sbjct: 182 TASASLLARVPGLSKSIAGKIASHRDANGAFADRAGLLRVRGLGAKTFTQCAGFLRVDGA 241 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 + L+ ++VHPE+Y + + LR + + F ++ FG Sbjct: 242 ADALEMTSVHPESYDLAR-----------------AALREILSDGFVEDAFGC 277 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 12/108 (11%) Query: 624 KPGRDPRPEFKTAQFA-DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 KPG D R A T DL G +L+G V NV FGAFVD+GV GLVH S+ Sbjct: 396 KPGADDRRGADRASLLRTHAATAKDLGVGDVLDGVVRNVVPFGAFVDVGVGDSGLVHRST 455 Query: 683 LSNKFVE-----------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 L +PH V +AG V+VKV +DL R RI+L + Sbjct: 456 LGAGSAGAGGGGGGRGRPEPHDVFRAGQSVRVKVTGLDLARGRISLAL 503 >UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S4Y8_NEMVE Length = 717 Score = 239 bits (610), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 149/394 (37%), Positives = 207/394 (52%), Gaps = 62/394 (15%) Query: 380 VELVAIGNGTASRETERFYLDV--QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLD 437 E +AIGNG RE E F D+ K F + + IVSE GASVYSAS A E P+L+ Sbjct: 311 CETIAIGNGVGCREAETFISDLIKSKAFHPLDPRYCIVSEDGASVYSASNEAMLELPNLE 370 Query: 438 VSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVD 497 +S+RGAVS+ RRLQDPL ELVKI+PK +G+G YQHD+ + L L V+ DCV+ VG D Sbjct: 371 ISMRGAVSLGRRLQDPLLELVKIEPKHLGIGMYQHDIPEVLLRAALQGVLTDCVSFVGAD 430 Query: 498 LNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 LN A V LL ++GL AQ IV +R++N F NR QLL+V +G K +EQC GF+R+ Sbjct: 431 LNAAGVSLLKCLSGLNEKRAQAIVEYREKNNGFVNRAQLLEVKGIGEKTYEQCVGFVRVR 490 Query: 558 -------HGD-----------------------------------NPLDASTVHPEAYPV 575 GD NPLD + +HPEAY Sbjct: 491 AAAAQTPAGDVICLDSDDEEEEAIGRKRKKRGENTSKKKARALKPNPLDMTPIHPEAYGA 550 Query: 576 VERILAATQQALKDL------MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR-- 627 ER + +D+ SS+L+ + + P +I ++ G+ Sbjct: 551 AERFMELVGVRPRDIGKPNIRTAISSKLQAQSLEKISGQLKVTPEALQLI--IDGLGQAV 608 Query: 628 --DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 D R F+ F G+ D++PG L G V+NVT FGAFVD G+ +DGL+H S ++ Sbjct: 609 DFDIRDGFERPLFKKGLTKFEDVRPGHELTGRVSNVTTFGAFVDCGIGRDGLIHTSRMAG 668 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + +D + AGD+V+VKV+ D + + L + Sbjct: 669 R--DD----LGAGDVVEVKVISKDETKGHVNLQL 696 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 11/226 (4%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 D +II+ +Q V + LLD NT+PFIARYRKE +GGLD LR+++ + Sbjct: 7 KDKCAQIISQNLQLDENVVSRILVLLDNDNTIPFIARYRKEHSGGLDPAVLRHIDGQYQL 66 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEA 121 L+E++++ ++ K I +Q LT ++ +A++ S E+++++ P+K K+RT A + Sbjct: 67 LKEVQKKAESTKKKIGDQ--LTIEIREALDNAQSVEEVDEIFGPFKKGKQRTLAGRARQL 124 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAED----AAL 176 GL+ A+ + P V +V D KG+++ K G +++L E ++D +L Sbjct: 125 GLDVAAERVLVHPQ---SVNLRDWVKKDTKGLSNIKEVSTGVQHVLAETISKDPSTSESL 181 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHR 222 A + + L + E E K++ Y P++ + SH+ Sbjct: 182 KALMEGCITLETSLSRSASKKTEAEVNKYKQYHAFKMPITRLRSHQ 227 >UniRef50_C5KAX6 Tex protein-relatedtranscription accessory protein, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAX6_9ALVE Length = 1632 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 206/645 (31%), Positives = 300/645 (46%), Gaps = 83/645 (12%) Query: 110 KRRTRGQIAIEAGLEPLADLLWSDPSH---------TPEVAAAQYVYADKGVADTKAALD 160 KR+T+ Q AI+AG P AD++ S T ++ V A + D +AA+ Sbjct: 9 KRKTKAQAAIDAGFGPAADVILSAAGQASPGGCLMRTDQLRRQAQVAASEEETDVEAAVV 68 Query: 161 GARYILMERFAEDAALLAKVRDYLWKNAHL-VSTVVS------GK-----EEEGAKFRDY 208 IL R A D + + R L A L V +V GK ++ ++ Y Sbjct: 69 A---ILTYRLAHDQEVRSICRSMLASRARLEVKGIVKRTSTPKGKIKVKPKQPKQQYSSY 125 Query: 209 FDHHEPLSTVPSHRALAMFRGR--NEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRL 266 L V H LA+ RG E +++ A Q +E Y L Sbjct: 126 GGLKRRLDRVKPHEWLAIKRGEAAKELRVKIVFPATTQLYGCLQERY------------L 173 Query: 267 NNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR-ER----AEDEAINVFARNLHDLLMA 321 + ++ R + + +E L R ER AED AI F N+ LM Sbjct: 174 ASGHGTCLCAKMIPTVIR-RTVDTIEKSLAREFRSERLTVPAEDFAIKTFTDNVSVKLMC 232 Query: 322 APAGLR---ATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA-------------A 365 P + +G+DPG G K V+ ATG+++ + G A Sbjct: 233 PPIRVEKDATVVGVDPGYVNGHKCVVISATGEVLDMFKFWTRPGGARWGPEITCIVWIAG 292 Query: 366 KAAMTVAALCEK---HNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 +A+ L +K LV +G+G S E V P + +V E GAS+ Sbjct: 293 SSALGPEQLVQKVSQWTCSLVVVGDGQGSAEAVESIRRVLP--PHMNVGICVVDECGASI 350 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSA +AA E PD+D+S RGAVSIARR+ DP+AE VK++PK+IGVG +QHD+ QL Sbjct: 351 YSAGAVAAAELPDMDISFRGAVSIARRVLDPIAEYVKLEPKNIGVGLFQHDMPPKQLDSA 410 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L ++ CV VGVDLNTASV LL VAGL A+ IV +R NG+F R++L KV + Sbjct: 411 LTQAIQWCVCQVGVDLNTASVQLLRYVAGLNAGTAKRIVEYRTSNGRFTCREELKKVKGI 470 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL-- 600 G F+Q AGF+R+ G PLD++ +HPE+Y ++ ++ ++ G S+L +L Sbjct: 471 GAAVFQQAAGFIRVYDGSEPLDSTGIHPESYDCARQL----KRLIETHRGEGSDLNSLLQ 526 Query: 601 KASDFTDEKFGVPTVTDIIKE---------LEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 S D + T +++ E LE P R PE + + G + +L+ G Sbjct: 527 HVSCEEDSEQARTTSAEVLTELVGSDRDVRLEHPERYRPPEIEYPPYRSGC-GITELEVG 585 Query: 652 MILEGAVTNVTNFGAFVDIGVHQD--GLVHISSLSNKFVEDPHTV 694 LEG+V NV +FGAFV + + GL+H+S+L D TV Sbjct: 586 AHLEGSVKNVVSFGAFVHLDCAESVTGLIHVSNLLPMVTLDSLTV 630 >UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9U2_PHATR Length = 966 Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 228/798 (28%), Positives = 346/798 (43%), Gaps = 159/798 (19%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 + S R++ AR + LL + + VPF+ RYR ++ L Q+ L+T S Sbjct: 58 DSSALRVVIARAAAR------TLPLLTDASAVPFVCRYRVDLVNPLTTRQVHLLQTLSSR 111 Query: 63 LRELEERRQAILKS--ISEQGK---LTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQI 117 L+ R +L++ ++ GK + + + SK ELED Y PYKP ++G + Sbjct: 112 HASLQSVRAKVLRAAAVAHDGKGNAENEAWISKVQTSTSKAELEDWYAPYKPP--SKGSV 169 Query: 118 AIEAGLEPLADLLWSD-PSHTPEVAAAQYVYADKGVADTKAAL-----DGARYILMERF- 170 D + +D P P++ A + + D+ L D ++L + Sbjct: 170 L---------DRIQNDHPELIPQLDA--FWHGDQDSFSIHRILKQHPKDAVLHVLSTKLI 218 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA---KFRDYFDHHEPLSTVPSHRALAMF 227 A + +++ V++ LWK+A + + + + A K+ Y D PLS + H+ LA+ Sbjct: 219 ANEPSVVETVQNELWKHAKIRTKPPASPSNDPAADQKYVVYHDFTAPLSRLRDHQILAIR 278 Query: 228 RGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV 287 RG + +LQLS D K C + + R +A Sbjct: 279 RGVEQKLLQLSYEVDGS-----KIEACMRYAVRRRWPRHGDA------------------ 315 Query: 288 LMHLETELMGTVRERAEDEAIN-----VFARNLHDLLMAAPAG-----------LRAT-- 329 L L+ DEA++ VFA N L+A PA RA+ Sbjct: 316 ---LPANLL--------DEAVHEAPGQVFAENTSRALLAPPASRGGGSSGNNASSRASPP 364 Query: 330 ---MGLDPGLRTGVKVAVVDATGKLVATD-TIYPHTGQAAKAAM-TVAAL------CEKH 378 + +DPG + G+K AV+D G + T + G A + T++ L + Sbjct: 365 LYLLSVDPGFQAGLKCAVLDVNGHVALQPLTTVKYLGNARTTGVRTMSTLLRDVADATQS 424 Query: 379 NVELVAIGNGTASRE------------TERFYLDVQKQFPKVTAQKVIVSEAGASVYSAS 426 N +V +GNG + E TE+ LD+Q +V EAGASV+S + Sbjct: 425 NTVVVTLGNGHGTHEARDLLREAAAVATEKLELDIQ-----------VVHEAGASVWSVT 473 Query: 427 ELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAV 486 E A +EFP+ S AVSI RR Q+PL EL+K+ P S+G+G YQHDV L L Sbjct: 474 EAAREEFPNDPPSAIAAVSIGRRWQNPLHELIKVPPASLGLGMYQHDVPPADLDDVLHRT 533 Query: 487 VEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL-KVSRLGPK 545 D AVGVD+NT V +L +V GL + +A I+A R RQ LL +V+ LGPK Sbjct: 534 SVDAAAAVGVDVNTCRVEILRKVPGLAK-LADAIMAAR----PLATRQDLLSRVTGLGPK 588 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS-- 603 F+ CAGFLRI G PLD + VHPE+Y +L L + N K+ Sbjct: 589 TFQACAGFLRIVDGPEPLDGTLVHPESYDTARWLLQTLSWDLLTVPTNLPPRAEWKSCWK 648 Query: 604 ---DFTDEKFGV------PTVTDIIKEL--------------EKPGRDPRPEFKT----- 635 + +FGV + +++ L + G PR + Sbjct: 649 DVLNAGSTQFGVSPERMLSVLENLVDSLINVDPRLRQGNDTGSRRGASPRWDGSNCARLP 708 Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV 695 A A + + P ++G V N+ +FGAFVD G DGL+HIS + V ++ Sbjct: 709 AGLAHDLAALQAACPVRNVQGTVRNLADFGAFVDFGGPHDGLLHISQMMANRVALDTLLI 768 Query: 696 KAG---DIVKVKVLEVDL 710 G DIV V+ +V L Sbjct: 769 GQGIGIDIVSVQDHKVSL 786 >UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q9N4L5_CAEEL Length = 745 Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 197/714 (27%), Positives = 328/714 (45%), Gaps = 81/714 (11%) Query: 20 QVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISE 79 Q V L G +IARYR ++ G L ++R + L + + + +++ Sbjct: 32 QAQRLVSLFKNGCETAYIARYRGDVHGYLAPEKIRKAMEAYVDAKNLNNKVSSAISTVT- 90 Query: 80 QGKLTDDLAKAINATLSK-----TELEDLYLPYKP-KRRTRGQIAIEAGLEPLADLLWSD 133 K+ K I K E+ D+ Y R+T+ IA GLEP A + Sbjct: 91 -AKVAGAQEKIIVTERFKRCEEFDEVTDISKEYSTGTRKTKANIARALGLEPPAQSILDG 149 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST 193 + + + K V D + L L+ R E + A + D L K VS Sbjct: 150 NFVDFKSLLSNGL---KTVKDVEEHLKICLADLINRDEEVRKVSANI-DILKKECR-VSA 204 Query: 194 VVSGKEEEG----------AKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA-- 241 +S + E+ K++++ + H A+ +G +EG++ + Sbjct: 205 KLSREAEKNRKDLEKRGIIEKYKNFIGEKWNAEDIRDHTVSALNKGFDEGIITWKIECEF 264 Query: 242 -DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 D ++ P + G++ ++ + ++++ + + +E ++ ++ Sbjct: 265 NDAKYIHPFSRKSV------YFGMK-------NFYQEALAYSIKNYFIPRIERKMANHLK 311 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV--ATDTIY 358 ++A+D +I +F N+ LL + + LDPG R+ +K A + TG++V ++ +IY Sbjct: 312 DKAKDRSIVLFGENVDQLLSQEGIRDKFVIALDPG-RSKIKTAFLKPTGEVVDMSSFSIY 370 Query: 359 P--HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV--QKQFPK-VTAQKV 413 G + E+ ++ + AIGNGT + T+ D+ FPK + Sbjct: 371 GTRFDGGGVDLLKKWSQQTERKDI-VFAIGNGTNTYNTQIAVSDMINSNVFPKEINVSYC 429 Query: 414 IVSEAGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 IV E GAS YS + A +EF + +++ AVSI RRL DP++E VKI+P+ +G GQYQ Sbjct: 430 IVPEHGASKYSCTPSAIEEFGENAEITEISAVSIGRRLIDPMSEYVKIEPQHLGKGQYQL 489 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 V +L L VV D V+ GVDLNTAS LL R+ GL A+ IV +R++NG+F++ Sbjct: 490 SVDPKKLNESLLNVVRDRVSFNGVDLNTASKNLLQRINGLNEKTAKEIVQYREQNGRFRS 549 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGD--------------------NPLDASTVHPEA 572 R +L +V +G F+QCAGFL ++ D NP D + VHP+ Sbjct: 550 RAELKEVKGIGALTFQQCAGFLTVSRPDDAEDGPPKKKFKKSSTSKEWNPFDETIVHPDD 609 Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELE-KPGRDPRP 631 Y E +L +++D+ G +++ S T E+ V ++++ L K P P Sbjct: 610 YRTGESLLGKLNVSIEDITG---RIKSFSISRLTAEE---AKVLNLLQNLTLKTKMKPPP 663 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 +T V + DL G G V+N T+FG F+DIGV QDGL HIS + Sbjct: 664 PLRTK-----VGQIRDLAEGQRFTGTVSNKTDFGVFIDIGVGQDGLAHISHFKD 712 >UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root RepID=A8WJL4_CAEBR Length = 809 Score = 208 bits (529), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 199/738 (26%), Positives = 334/738 (45%), Gaps = 100/738 (13%) Query: 25 VRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLT 84 + L EG +IARYR+++ GGL ++R + + +YL + + + GKLT Sbjct: 37 IALFKEGCETAYIARYREDVHGGLSPEKIR--KAKDTYLAAVHLNSKVASSITTITGKLT 94 Query: 85 D-DLAKAINATLSKT----ELEDLYLPYKP-KRRTRGQIAIEAGLE-PLADLLWSDPSHT 137 D +A+ L E+ D+ + P R+T+ IA GLE P +L + Sbjct: 95 GLDEKRAVTERLKGCDDMEEVSDITKEFAPGSRKTKANIARGLGLEGPALKVLNGEFVDF 154 Query: 138 PEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSG 197 + + K V D + + L+ + E + K+ L N + T Sbjct: 155 CSLITREM----KTVRDVEENMKALVADLINKDEEVRKIALKIVK-LQTNVRMTVTSKLT 209 Query: 198 KEEEGA-----------KFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFD 246 +E E ++R+ + SH A+ RG EGV+ + +P D Sbjct: 210 REVEKKIETEAVKKVRERYREVIGLTRTAYHIMSHTVSALNRGSEEGVIAWKVELNPS-D 268 Query: 247 EPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDE 306 + ++ + ++ N ++ + ++T + LE + + + +E+ Sbjct: 269 VTKMHPFQKKTVHRNM----QNFFQSAYFYSINTYT-----VPMLERGVKRFLSKSSEER 319 Query: 307 AINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA- 365 +I VF RN+ + + + LDPG + VK A ++ GK++ D + + +A Sbjct: 320 SITVFGRNVEQMFSQKGVHSKYVIALDPG--SIVKAAFLEPNGKVIDMDQ-FSFSFRAPT 376 Query: 366 --KAAMTVAALCEKHNVE---LVAIGNG--TASRETERFYLDVQKQFPK-VTAQKVIVSE 417 + + K + +VA+GNG T +T + + FPK + +V E Sbjct: 377 FDSRGIEILKNWAKQTMGKDIVVAVGNGSNTYGTQTAVSTMIQNEAFPKEIDVCFCVVPE 436 Query: 418 AGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 GAS YS ++ A +EF D+D+ L AVSI RRL DP++E VKI+P+ +G GQYQ +++ Sbjct: 437 HGASKYSCTDAAREEFGEDVDIKLISAVSIGRRLIDPMSEYVKIEPQHLGKGQYQLSINE 496 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 L KL VV D V+ +GVDLN AS LL + GL A IV +R + G+F++R +L Sbjct: 497 KSLKGKLVDVVRDRVSLIGVDLNLASEALLRNICGLNSTTAAEIVKYRMQKGRFKSRAEL 556 Query: 537 LKVSRLGPKAFEQCAGFLRINHGD-------------------NPLDASTVHPEAYPVVE 577 KV +G +F+QC+GFL ++ D +PLD +TVHP+ Y + Sbjct: 557 KKVKGIGDVSFQQCSGFLTVSRPDELDQPAKKRFKTPDGVAGWSPLDTTTVHPDHYGIAL 616 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL-EKPGRDPRPEFKTA 636 ++++ ++ ++ + ++ ++ T P +IIK L +KP P P Sbjct: 617 KLISKLNLTVEQIVSGA----DISFTNLT------PEEEEIIKLLRDKPDLKPPPVMMVL 666 Query: 637 Q----------FADGVETMNDLQPGMILEGAVTN-----------VTNFGAFVDIGVHQD 675 F + +L+ + G VTN +T+FG FVDIGV +D Sbjct: 667 AVSIPLNTCFFFQKKCRALKNLRVNEVFLGTVTNTVSSFSEAYLTITDFGVFVDIGVEKD 726 Query: 676 GLVHISSLSNKFVEDPHT 693 GLVHIS+ K E P T Sbjct: 727 GLVHISNY-RKNNEQPKT 743 >UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria RepID=B4BRE9_9BACI Length = 239 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/225 (49%), Positives = 146/225 (64%), Gaps = 7/225 (3%) Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 TASV LL V+GLT+ +++NIV R+E G+F++R +L + RLG K +EQC GFLRI G Sbjct: 12 TASVSLLQYVSGLTKTVSENIVKRREEQGKFRSRDELKTIPRLGAKTYEQCIGFLRILDG 71 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN-LKASDF--TDEKFGVPTVT 616 + PLD + +HPE Y V+R+L T D +G S+ELR L+A D T + G+ +T Sbjct: 72 EEPLDRTPIHPERYVEVKRLLQ-TLGFTTDAIG-SNELRQALQALDIEATAAELGIGELT 129 Query: 617 --DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 DII L +P RDPR E V M DL+PGM LEG V NV +FGAFVDIGV Q Sbjct: 130 LRDIIDALCRPERDPRDELPKPLLRKDVLKMEDLKPGMELEGTVRNVVDFGAFVDIGVKQ 189 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 DGLVHIS LS ++V P +V GD+VKV V VD+ + RI+L+M Sbjct: 190 DGLVHISKLSKQYVRHPLDIVSVGDVVKVWVEHVDVAKGRISLSM 234 >UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968DE9 Length = 197 Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 2/176 (1%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 F R+I+ + +Q+ + LL++G T+PFI+RYRKE TGGLD+ Q+ ++T L E Sbjct: 5 FHRMISAALGISEKQIGHTLDLLEDGATIPFISRYRKEATGGLDEVQIEAIKTHYEKLNE 64 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 +R++ I+ +ISEQGK+T +L K I+ T T LED+YLPYKPKRRTR ++A + GLEP Sbjct: 65 TAKRKETIINTISEQGKMTPELQKRIDETWDSTILEDIYLPYKPKRRTRAEVARQKGLEP 124 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 LA LL PE A YV + V D + AL GAR I+ E+ +ED VR Sbjct: 125 LATLLMLQREPNPEKRAEAYVKGE--VKDAEDALKGARDIIAEQVSEDEQARNTVR 178 >UniRef50_UPI000190EA94 putative transcription accessory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-2068 RepID=UPI000190EA94 Length = 96 Score = 145 bits (365), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 85/96 (88%), Positives = 88/96 (91%), Gaps = 3/96 (3%) Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ 740 SSLS KFV+DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET ARRGGG +R Q Sbjct: 1 SSLSTKFVDDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETAARRGGGADRAQ 60 Query: 741 NNRP---AAKPRGREAQPAGNSAMMDALAAAMGKKR 773 NRP AAKPRGR+AQPAGNSAMMDALAAAMGKKR Sbjct: 61 GNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR 96 >UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureus RepID=P95845_STAAU Length = 239 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 79/235 (33%), Positives = 132/235 (56%), Gaps = 3/235 (1%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ I + Q +Q++A + LL+E NTVPFIARYRKE TGGLD+ Q++ ++ Sbjct: 1 MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQTGGLDEVQIKQIDDEYQ 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y+ L++R++ ++K+I +QG LT++L K I +EDLY P+K K++TR A Sbjct: 61 YMVNLQKRKEEVIKNIEQQGLLTEELKKDILKQNKLQRVEDLYRPFKQKKKTRATEAKRK 120 Query: 122 GLEPLADLLWSDP-SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLA +W H + + ++ V + A+ GA+ I+ E+ +++ K+ Sbjct: 121 GLEPLA--IWMKARKHEVSIEEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKI 178 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVL 235 ++ L ++ E+E F Y+ + EP+ + +HR LA+ RG E VL Sbjct: 179 LKDMYHQGVLTTSKKKNAEDEKGIFEMYYAYSEPIKRIANHRVLAVNRGEKEKVL 233 >UniRef50_UPI0001910907 putative transcription accessory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-2068 RepID=UPI0001910907 Length = 119 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 74/82 (90%), Positives = 77/82 (93%) Query: 339 GVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 GVKVAVVD TGKLVATDTIYPHTGQAAKAA +AALCEK++VELVAIGNGTASRETERFY Sbjct: 1 GVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFY 60 Query: 399 LDVQKQFPKVTAQKVIVSEAGA 420 LDVQKQFP VTAQKVIVSEAG Sbjct: 61 LDVQKQFPNVTAQKVIVSEAGG 82 >UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=1 Tax=Nasonia vitripennis RepID=UPI00015B5616 Length = 1341 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 109/392 (27%), Positives = 178/392 (45%), Gaps = 70/392 (17%) Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 L +K+ P + + I+ A +++ S A EF D + LR A+S+ARRLQDPL E Sbjct: 704 LVAEKRCPAIKVE--IMDNHLAVIFANSLQARSEFRDYPLELRQAISLARRLQDPLVEFS 761 Query: 459 KI--DPKSIGVGQYQHDVSQTQLAR-------KLDAVVEDCVNAVGVDLNTA-----SVP 504 ++ I +Y HD+ Q QLA+ +L+ V + VN VGVD+N Sbjct: 762 QLCNSENEILCLKY-HDL-QDQLAKEELLQSIQLEFV--NRVNEVGVDINKIIQQHHGEN 817 Query: 505 LLTRVAGLTRMMAQNI--VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-- 560 LL V GL AQ + + EN +NR QL+ +GPK F C GF++I+ Sbjct: 818 LLQYVCGLGERKAQTLIRIVKHKENKCLENRSQLVTACHMGPKVFTNCVGFIKIDTDSLA 877 Query: 561 -------NPLDASTVHPEAYPVVERILAATQQALK-----DLMGNSSELRNLKASDFTDE 608 LD S VHPEAY ++ A +++ + DL S EL + Sbjct: 878 DSTEDYVEELDGSRVHPEAYEFARKMAADARRSSRRIEDLDLGAYSKELEK--------Q 929 Query: 609 KFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGV------ETMNDLQPGMILEGAVTN 660 FG +T DI +EL+ +D R +++ D + ET G ++E VT Sbjct: 930 GFGSKHITLRDIGRELDAGYKDARSPYRSPD-PDKLFNMLTKETPESFHIGKLVEATVTG 988 Query: 661 VTNFGA---------FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 ++ A +D G+ G +H +LS+++ +P V+ G ++ ++ +++ Sbjct: 989 ISYNKARGTAAGVQLRLDNGIR--GFIHKRNLSDEYATNPEEGVRVGGRIRCRITKIEAH 1046 Query: 712 RKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 R + T + ++ E G RP+ +R Sbjct: 1047 RFSVEATSKSNDLADE------GHRWRPRKDR 1072 >UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putative n=1 Tax=Ixodes scapularis RepID=B7Q0Q9_IXOSC Length = 1420 Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 151/650 (23%), Positives = 277/650 (42%), Gaps = 99/650 (15%) Query: 158 ALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV----VSGKEEEGAKFRDYFDHHE 213 AL GARY++ + + D + +R+ ++ A + T + +E + + ++ Sbjct: 378 ALKGARYMVAVQISMDPLVRRCIRETFFERAKICVTPSKKGLKEIDENHPCYPIKYLKNK 437 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS 273 P+ + + L M + EG+L+ S+ D P SY ++I + +N + Sbjct: 438 PVRDLEGEQFLHMSQAEGEGLLKTSIVMDSDSRSHPG-SYLDEIKQLYYRDEFSNNVQEW 496 Query: 274 WRKGVVSWTWRIKVLMH--LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMG 331 + + ++ + L++ E EL + A+D + R L++ L AP + M Sbjct: 497 NNQRCEALSYALSKLLYPAFEKELKVQLLLEAQDGIVKACCRKLYNWLKVAPYQVDPQME 556 Query: 332 LDPGL--RTGVKV---------------AVVDATGKLVATDTIYPHTGQAAKAAMTVAAL 374 D R G++V A++D TG+++ + PH + + Sbjct: 557 EDEDFDTRDGIRVFAIAYENDWEVPAFGALIDGTGEVMEHLRL-PHLLKRKNSWKEKERE 615 Query: 375 CEKHNVELV----------AIGNGTASRETERFYLDVQ---------KQFPKVTAQKVIV 415 ++H++ ++ I G SRE + D++ +Q P + + ++ Sbjct: 616 LKEHDMRVLRKFILNKKPHVICVGAQSREALQIVEDIKAVVTDLAENEQMPLINVE--LL 673 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY--- 470 A VY S+ A +F D + LR A+S+ARR+QDPL E ++ + I +Y Sbjct: 674 DNDLAIVYMNSKKAESDFRDYPLLLRQAISLARRMQDPLVEFSQLCTPDEEIFCLKYHPL 733 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTRVAGL-TRMMAQNIVAWR 524 Q V +T L+ + N VGVD+N T + L+ + GL R + + Sbjct: 734 QDSVPRTDFTNGLNLEFVNRTNEVGVDINLAIAHTHTSYLVQFLCGLGPRKGYALLKTLK 793 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI---------NHGDNPLDASTVHPEAYP- 574 + + ++R QL+ V +GPK F CAGF++I N LD S VHPEAY Sbjct: 794 QSHQRLESRTQLVTVCHMGPKVFINCAGFIKIDTTSFENSTNAYVEVLDGSRVHPEAYEW 853 Query: 575 -------------VVERILAATQQALKDLMGNSSELRN--LKASDF-TDEKFGVPTVTDI 618 V E + A +AL++++ N +LR L+A T + G+ Sbjct: 854 ARKMAVDALEYDDVTEDVNPA--EALEEILENPEKLRPMFLRAGKMVTCQVVGIARRKPH 911 Query: 619 IKELEK--PGRDPR------PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 ++L++ P R+ P F + E N G ++ G V + Sbjct: 912 GQQLDQANPIRNDETGLWQCPFCLKNDFPELSEVWNHFDAGSCPGQSM------GVRVRL 965 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +G +HI +S+K V +P V+ G I+ +++++D++R + LT R Sbjct: 966 DNGVNGFIHIRFISDKKVTNPEERVRPGMILHCRIIKIDIERFAVDLTCR 1015 >UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae) n=1 Tax=Ciona intestinalis RepID=UPI000180C965 Length = 1609 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 155/710 (21%), Positives = 278/710 (39%), Gaps = 157/710 (22%) Query: 156 KAALDGARYILMERFAEDAALLAKVRDYLWKNAHL-VSTVVSGKEE--EGAKFRDY-FDH 211 +A L+GARY++ + A + + VR + A + V GK+E EG Y + Sbjct: 516 EAVLEGARYMVAMQLAREPLVRQCVRQTFNERAKISVQPTKKGKKEIDEGHPCFSYKWLQ 575 Query: 212 HEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ--------FDEPPKESYCEQIIMDHLG 263 ++P+ + + L + E ++ ++++ D F+E + Y ++ HL Sbjct: 576 NKPVKDLSGPQFLHIKNAETENLVTMTIHIDMHGTVGSQTYFEEIKQLYYRDEF--SHLV 633 Query: 264 LRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 NN R VV + + + + EL + + A++ A L L AP Sbjct: 634 QEWNNQ-----RSKVVEFMLQNIIYPEMTKELKTLLYDEAKNGIKEHCALKLRSYLSVAP 688 Query: 324 AGLRAT-----------------MGLDPGLRTGVKVAVVDATGKLVATDTI-------YP 359 L + + + AVV G++V + Sbjct: 689 YQLEEREYDEDEEEERKGTVVMAIAYSEERDSAMFAAVVSGLGEVVDFLKLPNMRFRRKS 748 Query: 360 HTGQAAKAAMT----VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIV 415 H + AK + + K +V IG R DVQ+ + + VI Sbjct: 749 HIEEEAKRKKSDMDQLKKFMSKRKPHVVVIG--AEDRLATTIQEDVQQCVTDLEQEGVIS 806 Query: 416 SEAG-------ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 + A +SVY++++ A +F D V LR A+S+ARRLQDP+ E ++ D Sbjct: 807 NVAVELMDNELSSVYASTQRAQADFRDFPVELRQAISLARRLQDPMLEFSQLCTADQDLM 866 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCV---NAVGVDLNTA-----SVPLLTRVAGL-TR 514 + + Q +++ +L L+A+VE+ V VGVD+N A + ++ V GL R Sbjct: 867 CLKLHPLQDQLNKDEL---LEALVEEFVFRACEVGVDVNRAITHPHTATVVQFVCGLGPR 923 Query: 515 MMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD----------NPLD 564 A + + +NG+ +NR L+ V ++GPK F CAGF++I+ LD Sbjct: 924 KAAHLLKVLKQKNGRLENRSNLVTVCKMGPKIFINCAGFIKIDTKSIMEDSTDAYIEILD 983 Query: 565 ASTVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE---- 608 VHPE Y ++ A AL +++ + L++L F +E Sbjct: 984 GLRVHPETYEWARKMAVDALEYDESAEDANPSSALVEILESPERLKDLDLDAFAEELERQ 1043 Query: 609 KFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNV 661 +G +T DI EL +D R ++++ + ET+++ + G ++ VT + Sbjct: 1044 GYGNKGITLYDIRNELNSQYKDFRTPYRSSTAEEKFEMVTKETLSNFKEGKMITCRVTGI 1103 Query: 662 TN-------------------------------FGAFVDIGVHQD--------------- 675 + F ++ H D Sbjct: 1104 AHRRPKSEQLDQAEPHKDEETGMWNCSFCKTGGFAELSEVWAHLDNGECLGRAVGVKVRL 1163 Query: 676 -----GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G + LS+K V +P V G + ++ ++D++R ++ LT R Sbjct: 1164 EGGITGFIPTDKLSDKPVSNPEERVHIGMTIHCRITKIDIERFQVDLTCR 1213 >UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A210 Length = 913 Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 131/274 (47%), Gaps = 41/274 (14%) Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 L+ ++Q + Q ++ A+VY AS+L EF D LR AVSIARRLQDPL E Sbjct: 570 LESEQQMAPIKVQ--LIDSNVAAVYQASKLVETEFRDYPPLLREAVSIARRLQDPLIEFS 627 Query: 459 KI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTR 508 ++ D + + Q VSQ +L + VN VGVD+N A + ++ Sbjct: 628 RLCNPDDDILCLKLHPQQDAVSQEELKEAMFQEFIYRVNEVGVDINRAITHPHTASIVQF 687 Query: 509 VAGLTRMMAQNIV-AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP-- 562 V GL ++V + +N + NR QL+ +LGPK F CAGFL+I+ GD Sbjct: 688 VCGLGPRKGNSLVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGFLKIDTASAGDGADD 747 Query: 563 -----LDASTVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNLKASDF 605 LD++ +HPE Y ++ A +AL++++ N +L++L F Sbjct: 748 TYIEVLDSTRIHPETYEWARKMAVDALEYDEAADDANPAEALEEILENPDKLKDLDLDAF 807 Query: 606 TDE----KFGVPTVT--DIIKELEKPGRDPRPEF 633 +E +G ++T DI EL +D R F Sbjct: 808 AEELERQGYGNRSITLYDIRAELNSRYKDLRTPF 841 >UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eumetazoa RepID=SPT6H_DANRE Length = 1726 Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 99/408 (24%), Positives = 165/408 (40%), Gaps = 92/408 (22%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVG 468 +V A +Y S+ + +F D LR AVS+AR++QDPL E ++ D + + Sbjct: 875 LVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDDDILCLKLH 934 Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGL-TRMMAQNIVA 522 Q V + +L L + VN VGVD+N A + L+ + GL R + + Sbjct: 935 PLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPRKGSHLLKI 994 Query: 523 WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP------LDASTVHPEAY 573 + N + +NR QL+ + +GPK F CAGF++I+ GD+ LD S VHPE Y Sbjct: 995 LKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETY 1054 Query: 574 PVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE----KFGVPTVT- 616 ++ A AL++++ N L++L F +E +G +T Sbjct: 1055 EWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITL 1114 Query: 617 -DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP-----GMILEGAVTNVT-------- 662 DI EL +D R ++ + + P G ++ VTN+ Sbjct: 1115 YDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNIAHRRPQGES 1174 Query: 663 ---------------------NFGAFVDIGVHQD--------------------GLVHIS 681 NF ++ H D G + Sbjct: 1175 YDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMGFIPTK 1234 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 LS+K V+ P VK G V +++++D+++ + LT R + + N Sbjct: 1235 FLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNN 1282 >UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bilateria RepID=SPT6H_HUMAN Length = 1726 Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 102/399 (25%), Positives = 158/399 (39%), Gaps = 92/399 (23%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVG 468 +V A +Y S+ + EF D LR AVS+ARR+QDPL E ++ D + Sbjct: 884 LVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFH 943 Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGL-TRMMAQNIVA 522 Q V + +L L + VN VGVD+N A S L+ V GL R + Sbjct: 944 PLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKI 1003 Query: 523 WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP------LDASTVHPEAY 573 + N + ++R QL+ + +GPK F CAGFL+I+ GD+ LD S VHPE Y Sbjct: 1004 LKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETY 1063 Query: 574 PVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE----KFGVPTVT- 616 ++ A AL++++ N L++L F +E +G +T Sbjct: 1064 EWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITL 1123 Query: 617 -DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA--VTNVT----------- 662 DI EL +D R +++ + + P G + NVT Sbjct: 1124 YDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGES 1183 Query: 663 ---------------------NFGAFVDIGVHQD--------------------GLVHIS 681 NF ++ H D G + Sbjct: 1184 YDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTK 1243 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 LS+K V+ P VK G V +++++D+++ LT R Sbjct: 1244 FLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCR 1282 >UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS Length = 1841 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 98/406 (24%), Positives = 167/406 (41%), Gaps = 94/406 (23%) Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE-- 456 L+ +QFP + + I+ A +Y+ S+ +F + L+ AVS+AR++QDPL E Sbjct: 886 LETTEQFPPIEVE--IIDNELAKIYANSKKGESDFKEYPPQLKQAVSLARKMQDPLVEYS 943 Query: 457 -LVKIDPKSIGVGQY--QHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTR 508 L D + + + + Q V + L L + + VG+D+N + +V LL Sbjct: 944 QLCDADDEILCLRYHPLQERVPRDMLLEYLSLEFINRTSEVGLDINMMVQNSRTVNLLQY 1003 Query: 509 VAGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP-- 562 GL Q ++ + N + +NR QL+ V LGPK F C+GF++I+ GD+ Sbjct: 1004 TCGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEA 1063 Query: 563 ----LDASTVHPEAYPVVERILAATQQ----------ALKDLMGNSSELRNLKASDFTDE 608 LD S VHPE Y ++ + AL++++ + L++L F E Sbjct: 1064 YVEVLDGSRVHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVE 1123 Query: 609 ----KFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGA 657 FG ++T DI EL +D R F+ + ET + G + Sbjct: 1124 LERQGFGSKSITLYDIRNELSCLYKDYRSPFQKPSAEELFDLLTKETPDSFYVGKCVTAM 1183 Query: 658 VTNVT-------------------------------NFGAFVDIGVHQD----------- 675 VT T +F ++ H D Sbjct: 1184 VTGFTYRRPQGEQLDNANPVRNETTGSWQCPFCHKDDFPELSEVWNHFDANSCPGQASGV 1243 Query: 676 ---------GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 G +HI +LS+K V +P V+ ++ V+++++D+ R Sbjct: 1244 RVRLDNGLPGFIHIKNLSDKQVRNPEERVRVAQMIHVRIIKIDIDR 1289 >UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Neoptera RepID=SPT6H_DROME Length = 1831 Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 105/451 (23%), Positives = 186/451 (41%), Gaps = 100/451 (22%) Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE-- 456 L+ +QFP + + I+ A +Y+ S+ +F + L+ A S+AR++QDPL E Sbjct: 875 LETSEQFPPIEVE--IIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEYS 932 Query: 457 -LVKIDPKSIGVGQY--QHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTR 508 L D + + + + Q V + QL +L + + VG+D+N + ++ LL Sbjct: 933 QLCDADDEILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINLLQY 992 Query: 509 VAGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP-- 562 + GL Q ++ + N + +NR QL+ V LGP+ F C+GF++I+ GD+ Sbjct: 993 ICGLGPRKGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDSTEA 1052 Query: 563 ----LDASTVHPEAYPVVERILAATQQ----------ALKDLMGNSSELRNLKASDFTDE 608 LD S VHPE Y ++ + AL++++ + L++L F E Sbjct: 1053 YVEVLDGSRVHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVE 1112 Query: 609 ----KFGVPTVT--DIIKELE---KPGRDPRPEFKTAQFADGV--ETMNDLQPGMILEGA 657 FG ++T DI EL K R P + + D + ET + G + Sbjct: 1113 LERQGFGSKSITLYDIRNELSCLYKDYRTPYTKPSAEELFDMLTKETPDSFYVGKCVTAM 1172 Query: 658 VTNVT-------------------------------NFGAFVDIGVHQD----------- 675 VT T +F ++ H D Sbjct: 1173 VTGFTYRRPQGDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDANACPGQPSGV 1232 Query: 676 ---------GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR---LDE 723 G +HI +LS++ V +P V+ ++ V+++++D+ R + + R L + Sbjct: 1233 RVRLENGLPGFIHIKNLSDRQVRNPEERVRVSQMIHVRIIKIDIDRFSVECSSRTADLKD 1292 Query: 724 QPGETNARRGGGNE---RPQNNRPAAKPRGR 751 E RR + Q+NR + + R Sbjct: 1293 VNNEWRPRRDNYYDYVTEEQDNRKVSDAKAR 1323 >UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=Sordariomycetidae RepID=SPT6_NEUCR Length = 1402 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 137/586 (23%), Positives = 243/586 (41%), Gaps = 103/586 (17%) Query: 224 LAMFRGRNEGVLQL--SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSW---RKGV 278 L M + EG++++ SL D +F + Q+ D + AD W R+ V Sbjct: 596 LKMMKAEEEGLIEIKVSLENDREFRQ--------QLFSDFASENFSEL-ADKWNAERQKV 646 Query: 279 VSWTWR--IKVLMH---------LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR 327 + + +KV++ + EL+ T RE + ++ P L Sbjct: 647 IDLAFDKLVKVIVKGVKDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIGTTPRVLT 706 Query: 328 ATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGN 387 + G+ R V +D G+++ T + + + +A L + +++ I Sbjct: 707 LSNGMGDPNREPVSWVSMDEDGRILEHGT-FTNLARDESQREALAELVRRRQPDVIGISG 765 Query: 388 GTASRETERFYLDVQ------------------KQFPKVTAQKVIVSEAGASVYSASELA 429 +A +T R DV+ ++ + +++++ A +Y S A Sbjct: 766 FSA--DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRA 823 Query: 430 AQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVV 487 + P L+ R +++AR +Q+P+ E + D S+ + YQ + Q +L + L+ + Sbjct: 824 VADHPSLNPMTRYCIALARYMQNPMKEYAALGKDVTSLQIHPYQQYLPQAKLLKHLETAM 883 Query: 488 EDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDENGQ-FQNRQQLL---- 537 D VN VGVD+N A + LL VAGL AQ ++ ++NG +R +L+ Sbjct: 884 VDMVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPE 943 Query: 538 --KVSRLGPKAFEQCAGFLRI-----NHGDNPLDASTVHPEAYPVVERILA-------AT 583 K+ LGP+ + CA FL I N +PLD + +HPE Y + ++ A Sbjct: 944 RHKLPVLGPRVWNNCASFLFIEYEPTNPESDPLDNTRIHPEDYDLARKVAADALGLDEED 1003 Query: 584 QQALKDLMGNSSELRNLKASDFTD-------EKFGV-----------PTVTDIIKELEKP 625 +A D G + +R L D D E++ T+ I EL+ P Sbjct: 1004 VKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQVP 1063 Query: 626 GRDPRPEFKTAQFADGVETM------NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 + R +F++ D V TM + L GMI+ V V + A V + +G + Sbjct: 1064 YEELRKKFESLT-VDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRIE 1122 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA--LTMRLDE 723 +S + V+ G +V+ K+ +DL RK L+MR +E Sbjct: 1123 SHDVS--YRHSIKDVLHVGQVVQAKL--IDLNRKEFVSKLSMRDEE 1164 >UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YD45_BRAFL Length = 1823 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 154/710 (21%), Positives = 272/710 (38%), Gaps = 164/710 (23%) Query: 159 LDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEE------GAKFRDYFDHH 212 L GAR+++ + + + + VR ++ A + + +E G F+ + + Sbjct: 617 LQGARHMVAMQLSREPLVRQCVRQTYFERAKVSTKPTKKGRKEIDEMHYGYTFK--YLKN 674 Query: 213 EPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQII-------MDHLGLR 265 +P+ + + L M +EG+L+ ++ D + +SY E+I HL Sbjct: 675 KPVKDLTGDQFLKMSIAEDEGLLKTHVSIDGE----TTQSYFEEIKQLYYRDEFSHLVQE 730 Query: 266 LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 N R V+ + + +E EL + + ++D I R L++ L AP Sbjct: 731 WNTQ-----RTMVLERMLKFILYPQMEKELRSKLVQESKDGIIKSCCRKLYNWLKVAPYQ 785 Query: 326 LRAT----------MGLDPGLR-----------TGVKVAVVDATG---------KLVATD 355 MG GLR T AV+D G L+ Sbjct: 786 PEQQIEEEDEYIEGMGSSKGLRVMGLAYSSDWDTASFAAVIDGEGDVVDFLRLAHLMKRR 845 Query: 356 TIYPHTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDV--------QKQF 405 Y + K + ++ L ++ IG +R+ + DV ++Q Sbjct: 846 NAYREADRENKLSDMESIKNLILNKKPHVIVIG--AENRDAQSVIDDVKLCVKELEEEQQ 903 Query: 406 PKVTAQKVIVSEAGASVYSA--SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--- 460 A +++ +E + ++ +E +++P L LR A+S+ARR+QDPL E ++ Sbjct: 904 LAPIAVELLDNELSRFIMNSPRAEAEHRDYPPL---LRQALSLARRMQDPLIEFSQLCVN 960 Query: 461 --DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLT 513 D + Q VS+ L L+ + VN VGVD+N + L V GL Sbjct: 961 NDDLLCLRFHTLQEQVSREDLLHALELEFINRVNEVGVDINRCVANNHTTTLAQFVCGLG 1020 Query: 514 RMMAQNI-VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---GDNP-----LD 564 A I + N + +NR QL+ + +GPK F CAGF++I+ GD+ LD Sbjct: 1021 PRKAAYIQKVLKQNNARLENRNQLVMMCHMGPKVFMNCAGFIKIDTKSLGDSEQYIELLD 1080 Query: 565 ASTVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE---- 608 S VHPE Y ++ A AL++++ L++L F +E Sbjct: 1081 GSRVHPETYDWARKMAVDALEYDESAEDANPAAALEEILETPERLKDLDLDAFAEELERQ 1140 Query: 609 KFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP-----GMILEGAVTNV 661 FG ++T DI EL +D R F++ + + P G +++ VT + Sbjct: 1141 GFGNKSITLYDIRAELNSMYKDLRTPFRSPTVEEKFNMLTKETPETFYIGKLVQCRVTGI 1200 Query: 662 TN-------------------------------FGAFVDIGVHQD--------------- 675 + F ++ H D Sbjct: 1201 AHRRPQGDQLDQANPVRSEETGLWRCPFCQKDTFPELSEVWNHFDSSECPGQATGAVTRL 1260 Query: 676 -----GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G + +S+K V+ P VK G V +++++D++R R+ L+ R Sbjct: 1261 DNGVSGFIPTKMISDKHVKSPEERVKPGMEVYTRIIKIDIERFRVDLSCR 1310 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 48/96 (50%), Positives = 65/96 (67%), Gaps = 2/96 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + DL PGM LEG VT++ +G FVDIGV +DGLVHIS +S+ +E P +VK GD VKV+ Sbjct: 136 VKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVR 195 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ 740 V V+ +RI+LTMR E+ E R G G ++P+ Sbjct: 196 VKSVEPDGRRISLTMRTKERSAE--PRSGRGKKKPE 229 Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 44/81 (54%), Positives = 59/81 (72%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + L+ G ILEG ++ + FGAFVDIGV +DGLVHIS LSN V VVK GD V+ Sbjct: 316 QKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVGDRVQ 375 Query: 703 VKVLEVDLQRKRIALTMRLDE 723 V+VL+VD Q KRI+L++RL++ Sbjct: 376 VRVLDVDPQSKRISLSLRLED 396 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 48/78 (61%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L+ G +EG VT + FG FVDIGV +DGLVH+S L+ VE VV+ G Sbjct: 233 EKLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYT 292 Query: 703 VKVLEVDLQRKRIALTMR 720 KVLEVD RI+L++R Sbjct: 293 FKVLEVDAAGARISLSLR 310 >UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus RepID=A9WBG5_CHLAA Length = 520 Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 42/76 (55%), Positives = 57/76 (75%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + DLQPGM LEG VT++ +G FVDIGV +DGLVHIS +S++ +E P VV+ GD VKV Sbjct: 98 LKDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQIGDTVKVW 157 Query: 705 VLEVDLQRKRIALTMR 720 V ++ + +RI+LTMR Sbjct: 158 VKSIEPEARRISLTMR 173 Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 51/78 (65%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L+ G ++EG +T FGAF DIGV +DGL+H+S L+ VE P VK G+ + Sbjct: 202 EKLAALRVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGERYQ 261 Query: 703 VKVLEVDLQRKRIALTMR 720 K+LE+D + RI+L++R Sbjct: 262 FKILEIDGEAARISLSLR 279 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/80 (62%), Positives = 59/80 (73%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M L+ G ILEG V+ + FGAFVDIGV +DGLVHIS+L+ VE VVK GD VKVK Sbjct: 287 MQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHRVEKVEDVVKVGDKVKVK 346 Query: 705 VLEVDLQRKRIALTMRLDEQ 724 VL VD Q KRI+LTMRL+E+ Sbjct: 347 VLGVDQQSKRISLTMRLEEE 366 >UniRef50_Q0WVD2 Elongation factor Ts (Fragment) n=5 Tax=cellular organisms RepID=Q0WVD2_ARATH Length = 631 Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 43/95 (45%), Positives = 64/95 (67%), Gaps = 3/95 (3%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +L PG G V + FGAFVD G DGLVH+S LS+ FV+D +VV G VKV+++ Sbjct: 132 ELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLV 191 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNERPQN 741 E D++ KRI+LTMR ++ P + R+ GG+++P++ Sbjct: 192 EADIESKRISLTMRENDDPPK---RQSGGSDKPRS 223 >UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditis RepID=SPT6H_CAEEL Length = 1521 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 84/294 (28%), Positives = 127/294 (43%), Gaps = 43/294 (14%) Query: 384 AIGNGTASRETERFYLDVQKQFPKVTAQKVI--------VSEAGASVYSASELAAQEFPD 435 AIG E R D+++ + +Q +I + A VY S ++ E PD Sbjct: 815 AIGLNIEDMECTRLKRDLEEAVADLFSQNLIYKPIPVFLMDNEAAKVYMRSNVSLAENPD 874 Query: 436 LDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDC 490 +LR A+S+AR L DP+ E + D + + Q D+ Q QLA L + + Sbjct: 875 HPPTLRQALSLARLLLDPIPEYAHLWNIDEDIFCLSLHPLQRDIDQEQLALVLSHELVNK 934 Query: 491 VNAVGVDLN-TASVPLLTRVAGLT-----RMMAQNIVAWRDENGQFQNRQQLLKVSRLGP 544 VN GVD+N A P T + T R + + + + ++R +L+ +LGP Sbjct: 935 VNEEGVDINKCAEFPHYTNMLQFTCGLGPRKATDLLKSIKANDNLIESRSKLVVGCKLGP 994 Query: 545 KAFEQCAGFLRINHGD---------NPLDASTVHPEAYPVVERIL---------AATQQA 586 K F CAGF++I+ LD S VHPE Y ++ A A Sbjct: 995 KVFMNCAGFIKIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADPTAA 1054 Query: 587 LKDLMGNSSELRNLKASDFTDE----KFG--VPTVTDIIKELEKPGRDPRPEFK 634 L+++M + LR+L F DE FG T+ DI EL +D R F+ Sbjct: 1055 LQEIMESPDRLRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPFQ 1108 >UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEV9_RHOBA Length = 1257 Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 73/289 (25%), Positives = 129/289 (44%), Gaps = 8/289 (2%) Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP-GLRTGVKVAVVDATGKLVATDTI 357 ++E+A +++ A NLH + + M +D G RT ++V + G+L+ ++ I Sbjct: 488 LQEQASARLVSIAADNLHSQINRGGVEAKVVMSIDAVGPRTAA-TSIVSSDGRLLHSEDI 546 Query: 358 YPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIV 415 A + A + L H+V+L+ I NG A R ++ KQ + + + Sbjct: 547 PCQLSAAMRTLAVTKMGELIHAHHVDLIVISNGPARRACMIAVGELIKQSADKSVRWTLA 606 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 +GA Y+ QE R A IA P LVK+DP + +G +Q ++S Sbjct: 607 DRSGADAYAGGPAGDQEMKSTPRRFRAAAWIAFSAMQPAQALVKVDPLKLRLGSFQRELS 666 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 + L+ V+ GVD+N+ + + R+ G+T ++Q I R E +R+ Sbjct: 667 DDAVLSALEDVMVSGAARGGVDVNSTATTWMQRLPGITPDISQAIDERRREK-LIASRED 725 Query: 536 LLKVSRLGPKAFE--QCAGFLRINHGDNPLDASTVHPEAYPVVERILAA 582 L P Q FLR+ + LD + +HP+ YP+ +++ A Sbjct: 726 LATAVEW-PSVVNSRQAMPFLRVFASEETLDGTLIHPDDYPLAKKLATA 773 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 52/89 (58%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 ++++L+ G + G V V FG F+++ GL+H+S +S+ +VED H V+ GD++ Sbjct: 975 SLSELKQGDQVIGVVVGVMPFGVFIELSPDCSGLIHVSRISDSYVEDLHEAVQVGDVITA 1034 Query: 704 KVLEVDLQRKRIALTMRLDEQPGETNARR 732 V D +R+R+AL+ E+ +RR Sbjct: 1035 WVTGTDAKRRRVALSAISPEREAAMESRR 1063 >UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U0_HERA2 Length = 501 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 42/76 (55%), Positives = 55/76 (72%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + DL GM L+G VT+ +G FVDIGV +DGLVHIS +S++ +E P VV+ GDIVKV+ Sbjct: 99 LADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQRIESPTDVVQIGDIVKVR 158 Query: 705 VLEVDLQRKRIALTMR 720 V VD +RI+LTMR Sbjct: 159 VKSVDPDARRISLTMR 174 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/78 (57%), Positives = 56/78 (71%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + PG +L+G V+ + FGAFVD+GV +DGLVHIS LS V VVK GD VKV+VLE Sbjct: 293 IAPGTVLDGKVSGIAPFGAFVDLGVGRDGLVHISELSEGRVGKVDDVVKVGDPVKVRVLE 352 Query: 708 VDLQRKRIALTMRLDEQP 725 VD KRI+LTMR++E P Sbjct: 353 VDPDSKRISLTMRVEEAP 370 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 49/78 (62%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + +L+PG +++G V + FG FVDIGV +DGLVHIS LS VE V G Sbjct: 193 DKLGELKPGDLVDGTVNGIAPFGVFVDIGVGKDGLVHISELSENRVEKAEDAVTVGQSYT 252 Query: 703 VKVLEVDLQRKRIALTMR 720 +VLEVD +RI+L++R Sbjct: 253 FRVLEVDTGAQRISLSLR 270 >UniRef50_UPI000186D180 transcription elongation factor SPT6, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D180 Length = 1783 Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 126/565 (22%), Positives = 218/565 (38%), Gaps = 138/565 (24%) Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP---------------AGLRATMG 331 +L L+ EL + A + + + R L++ + AP GLR MG Sbjct: 723 LLPDLKKELKAHLLSEAREYILKLCTRKLYNWIKIAPYTSEFDHDDEDWDTSKGLRV-MG 781 Query: 332 LD--PGLRTGVKVAVVDATGKLVATDTI-YPHTGQAAKAAMTVAALCEKHNVELVAIGN- 387 + P L VV G+ TD + PH + +A + ++H+ L ++ N Sbjct: 782 VAYVPDLSQAAFACVVGPDGE--CTDYLRLPHLLKRKLSANKEDNIKKEHD--LTSLKNL 837 Query: 388 -----------GTASRETERFYLDVQK---------QFPKVTAQKVIVSEAGASVYSASE 427 G SR+ D+Q+ +F + + I+ A Y+ S Sbjct: 838 IQSKKPHVIVIGGESRDAIMIKTDIQQLVTSLVEDDEFASIAVE--ILDNELAKTYANSI 895 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY---QHDVSQTQLARK 482 EF D + LR A+S+ARR+QDPL E ++ + I +Y Q V + +L Sbjct: 896 KGENEFRDYPLLLRQAISLARRMQDPLTEFSQLCTSDEEILCLRYHPLQDQVPKEELLEA 955 Query: 483 LDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGL-TRMMAQNIVAWRDENGQFQNRQQL 536 L + N VGVD+N A + L+ + G R A + + N + +NR QL Sbjct: 956 LYIEFINRTNEVGVDVNRAVAQAYTSNLVQFICGFGPRKAAALLKTLKQNNQRLENRTQL 1015 Query: 537 LKVSRLGPKAFEQCAGFLRINH---GDNP------LDASTVHPEAYPVVERIL------- 580 + +GPK F CAGF++I+ GD+ LD S VHPE Y ++ Sbjct: 1016 VTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYD 1075 Query: 581 ---AATQQALKDLMGNSSELRNLKASDFTDE----KFGVPTVT--DIIKELEKPGRDPRP 631 A AL++++ + L++L F +E FG ++T DI EL D R Sbjct: 1076 DEEANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNHRYNDLRT 1135 Query: 632 EFKTAQFADGVETMNDLQP-----GMILEGAVTNVT------------------------ 662 + + + + + P G ++ V +T Sbjct: 1136 PYWSPNSEELFDMLTKESPETFYIGKMVLARVVGITHKRPKGDQLDQANPVRNDETNLWQ 1195 Query: 663 -------NFGAFVDIGVHQD--------------------GLVHISSLSNKFVEDPHTVV 695 +F ++ H D G +H+ +LS+K V +P V Sbjct: 1196 CPFCLKNDFPELSEVWNHFDAGSCPGQATGVRLRLDNGINGYIHVRNLSDKHVSNPEERV 1255 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR 720 + ++ ++ ++++ R + T + Sbjct: 1256 QQNQMIHCRITKIEVDRFSVECTSK 1280 >UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leotiomyceta RepID=SPT6_GIBZE Length = 1408 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 51/359 (14%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY 470 V+V++ A +Y S A E P L+ R V++AR +Q+P+ E + D S+ Sbjct: 814 VVVNDEVARLYKDSPRALAEHPSLNPITRYCVALARYMQNPMKEYAALGKDVSSLSYHPC 873 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTRVAGLTRMMAQNIVAWRD 525 Q+ + +LA+ LD+ + D VN GVD+N T + LL V+GL A +++ + Sbjct: 874 QNLLPADKLAKYLDSAMVDMVNLCGVDINEAMNDTYTANLLPYVSGLGPRKATSVIKAIN 933 Query: 526 EN-GQFQNRQQLL------KVSRLGPKAFEQCAGFLRI-----NHGDNPLDASTVHPEAY 573 N G R +L+ K+ +GP+ + CA FL I N +PLD + VHPE Y Sbjct: 934 ANGGAVGTRDELVGDPDSGKLPVVGPRVWNNCASFLFIEYEATNPSSDPLDNTRVHPEDY 993 Query: 574 PVVERILA-ATQQALKDLMGNSSE------LRNL-------KASDFTDEKFGV------- 612 + ++ A A + +D+ G + E +R L K ++ E++ Sbjct: 994 ELGRKMAADALELDEEDVKGETDENGPGAIVRKLFKMDEQDKVNELVLEEYAEQLERNYS 1053 Query: 613 ----PTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN 663 T+ I EL+ P + R F ++ ET + L GMI+ V V + Sbjct: 1054 QRKRATLETIRAELQAPYEELRRNFALLSASEIFTMFTGETKHTLCEGMIVPVNVRVVKD 1113 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 A V + +G V +S++ V+ +G + K+L+++ + L+MR D Sbjct: 1114 DFAIVKLDCGIEGRVEGHEVSHR--SSIKEVLSSGQTSQAKILDINYKDFMAKLSMRED 1170 >UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7G0_SCHJY Length = 1372 Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 90/348 (25%), Positives = 157/348 (45%), Gaps = 42/348 (12%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY 470 ++V++ A +Y+ SE AA+E P L R V++AR +Q PL E + D S+ ++ Sbjct: 781 IMVNDEVARIYTNSERAAEELPALPSLGRYCVALARYVQHPLLEYAALGRDIMSLSFHKW 840 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIV-AWR 524 QH + Q L R L++ + D N VG+D+N A +L ++GL AQ ++ Sbjct: 841 QHLLPQEMLWRYLESALVDVSNLVGIDINEAVNNKYEASILPYISGLGPRKAQALLKKIA 900 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP----LDASTVHPEAYPVVERIL 580 G+ R L+ + L K F CA FL I + D P LD++ +H E Y + ++ Sbjct: 901 AHGGRLDTRSDLITKTILTGKIFINCASFLYIPNEDLPKMDILDSTRIHNEDYELARKMA 960 Query: 581 A-------------ATQQALKDLMGNSSE---LRNLKASDFTDE------KFGVPTVTDI 618 + +Q+ + + S+E L +L ++ D+ T+ I Sbjct: 961 SDALELDEEDIEEYESQKGVVYHLITSNEVDKLDDLVLEEYADQLEREFHHLKRNTLERI 1020 Query: 619 IKELEKPGRDPRPEFKTAQFAD------GVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 +EL+ P + R F ++ G+E + DL P I+ V VT+ V + Sbjct: 1021 RRELKDPYGERRNLFHILTPSEIFLMLTGIE-LTDLPPNTIVPVNVKRVTSRYVAVKLDC 1079 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 DG + +S+ + P +++ G V+ +L +D L+MR Sbjct: 1080 GIDGNITAEEVSDDHIPPPQ-LLQTGQTVEAVILTLDEVNFTAELSMR 1126 >UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015551B3 Length = 613 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 4/120 (3%) Query: 286 KVLMH--LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVA 343 K L+H L E + AE E+I +F RNL LL+ +P R MG+DPG + G K+A Sbjct: 481 KRLIHPLLCREFRSKLTSEAEKESIMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLA 540 Query: 344 VVDATGKLVATDTIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV 401 ++ T +++ TD Y H+ G A+ + + L + V IGNGTA RETE ++ D+ Sbjct: 541 IISPTSQILHTDVAYLHSRQGNVARESEKIKRLLLNFSCSTVVIGNGTACRETEAYFADL 600 >UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eurotiomycetidae RepID=SPT6_ASPOR Length = 1422 Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 99/367 (26%), Positives = 161/367 (43%), Gaps = 65/367 (17%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY 470 +IV++ A +Y SE A ++ P V++A+ LQ PL E + D SI Sbjct: 829 IIVNDEVARLYQHSERAKKDHPSFAPLTHYCVALAKYLQSPLKEYASLGRDIVSIQFKPG 888 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRD 525 Q V+Q L ++L+ + D VN VGVD+N A + LL V GL A +++ + Sbjct: 889 QQLVTQELLLKQLETALVDMVNLVGVDINEAVTDSSTANLLPYVCGLGPRKAAHLLKIVN 948 Query: 526 ENGQ-FQNRQQLLKVS----RLGPKAFEQCAGFLRINHGD-----NPLDASTVHPEAYPV 575 NG NR +LL V+ +G K + CA FL I+ + +PLD + VHPE Y + Sbjct: 949 MNGGVVNNRVELLGVNAQYPAMGVKVWNNCASFLYIDFENVDPDADPLDNTRVHPEDYDI 1008 Query: 576 VERILAATQQ-------ALKDLMGNSSELRNL-------KASDFTDEKFGV--------- 612 ++ A + A D G + +R L + +D E++ Sbjct: 1009 ARKMAADALELDEEDIKAETDENGTGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQR 1068 Query: 613 --PTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN-- 663 T+ I EL++P + R ++ D ET + L GM++ ++ V++ Sbjct: 1069 KRATLETIRAELQQPYEELRKQYVFLSTDDIFTMLTGETSDTLAEGMVVPISIKRVSDDH 1128 Query: 664 FGAFVDIGVHQDGLVHISSLSNKF------VEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 +D G+ D LV S L++++ + PH V A K+L L RK Sbjct: 1129 IDGKLDCGI--DALVPESELTDRYDIPVRALYSPHQTVSA------KILF--LNRKNFTC 1178 Query: 718 TMRLDEQ 724 + L E+ Sbjct: 1179 NVSLREE 1185 >UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia malayi RepID=A8PCB0_BRUMA Length = 1512 Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 36/267 (13%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPL---AELVKIDPKSIGVGQY 470 IV A +Y S+ A EF + LR AVS+ R L DPL A L D + V + Sbjct: 865 IVDNEAAKIYMHSKQAITEFSNYPPMLRQAVSLGRLLLDPLIEYAHLCNTDDDILCVSYH 924 Query: 471 --QHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTRVAGLTRMMAQNIVAW 523 Q +V++ +L L + VN VGVD+N + + LL V GL A +++ Sbjct: 925 PLQSEVNKDELLFALSLEFINRVNEVGVDVNRCLEYSHTSYLLQFVCGLGPRKAVHLLKI 984 Query: 524 RDENGQ-FQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPEAY 573 +N ++R +L+ + R+GPK F AGF++I+ LD S VHPE Y Sbjct: 985 LKQNDNLLESRTKLVTLCRMGPKVFMNSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETY 1044 Query: 574 PVVERI---------LAATQQALKDLMGNSSELRNLKASDFTDE----KFGVPTVT--DI 618 ++ A AL++++ N +L++L F +E FG ++T DI Sbjct: 1045 EWARKMAVDALEIDDAADPTSALEEILQNPDKLKDLDLDAFAEELARQGFGNKSITLYDI 1104 Query: 619 IKELEKPGRDPRPEFKTAQFADGVETM 645 EL +D R +++ A+ + TM Sbjct: 1105 RAELNHRYKDLRIPYESPS-AERIFTM 1130 >UniRef50_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BU42_THAPS Length = 398 Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + DL+ G +E V +T +GAF+DIG D LVH+S LS+ FV + VVKAG+ + V+ Sbjct: 138 LADLEIGASVEATVKTITAYGAFLDIGAKSDALVHVSRLSDDFVANVEDVVKAGEKITVR 197 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 ++ VD ++ +IA+TMR +E + AR ERPQ + Sbjct: 198 IVSVDTEKNQIAVTMRSEEAEA-SAARPTKRRERPQRS 234 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/121 (33%), Positives = 52/121 (42%), Gaps = 28/121 (23%) Query: 653 ILEGAVTNVTNFGAFVDIGVHQ---------DGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 ++G V + FGAFV Q DGLVHIS+L+ + V GD V V Sbjct: 258 FIDGEVVSTLAFGAFVRFDSAQLGEGLEGEVDGLVHISALAEGRTANVSDVAAVGDKVSV 317 Query: 704 KVLEVDLQRKRIALTMRLDEQ-----PGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 +V V+ + RI+L+M EQ P T R GGG GRE P N Sbjct: 318 RVRSVEPEAGRISLSMITKEQEEAAPPARTERRSGGG--------------GREVAPIAN 363 Query: 759 S 759 S Sbjct: 364 S 364 >UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G582_PHATR Length = 1958 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 99/403 (24%), Positives = 168/403 (41%), Gaps = 94/403 (23%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL-----VKIDPKSIG-- 466 ++ ++ A ++ S +EFPD V+L+ A+++AR QDPL EL V D + G Sbjct: 1168 LIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGELTYAWSVASDAGAFGTE 1227 Query: 467 -----VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMM 516 + Q + +T+L R+ + ++ D VG D+N+A LL VAG+ Sbjct: 1228 MLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTFDHLRGLLVFVAGMGPRK 1287 Query: 517 AQNIVAWRDENGQ-FQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-------NPLDASTV 568 A N+ + G R+ LL+ +GP + FLRI D +PLD + + Sbjct: 1288 AANLKQTLSQLGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVDQLVEQFLHPLDDTRL 1347 Query: 569 HPE-----------AYPVVER-----ILAATQQALKDLMGNS------------SELR-- 598 HP+ A+ +ER AA+ +AL+D+M NS SE Sbjct: 1348 HPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHEVERLFMATKSEWEMN 1407 Query: 599 -----NLKASD-------------------------FTDEKFG-VPTVTDIIK-ELEKPG 626 N+K D D K G + ++IK E P Sbjct: 1408 YGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRWHSHLEMIKWEFRLPY 1467 Query: 627 RDPRPEFKTAQFADGV------ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 DPR + +D + E+ L+PG + G V +FG+ V + + + Sbjct: 1468 VDPRKPMEPVS-SDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGSRVKLEGEIPAFIPL 1526 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +LS++ VE +V AG IV + V + + +++++++ Sbjct: 1527 RNLSDEHVETAEDIVAAGQIVTAVITMVKKEHMTVDMSLKMED 1569 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E +N LQ G I +G V+++ NFGAFVD+G DGLVH+S LS K ++ P VV+ G+ V Sbjct: 201 EFLNQLQKGAIRKGVVSSIVNFGAFVDLG-GVDGLVHVSELSWKHIDHPSEVVQVGNEVT 259 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 V+VL+VD+ R+R++L+++ E P AR Sbjct: 260 VEVLDVDMDRERVSLSLKATQEDPWRHFAR 289 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/70 (47%), Positives = 48/70 (68%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+ G VT + FGAFV + +GLVHIS L+ + VE P VV GD VKV+++DL Sbjct: 294 GQIVPGKVTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDL 353 Query: 711 QRKRIALTMR 720 +R+RI+L+++ Sbjct: 354 ERRRISLSLK 363 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/116 (38%), Positives = 69/116 (59%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + + G +LEG V V +FGAFV+I +GLVH+S +SNK +E+P V+K+GD V+ Sbjct: 308 EAADQIAAGSVLEGTVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQ 367 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 VKVL++ +RI+L+M+ E+ E RRG + + A K + A G+ Sbjct: 368 VKVLDIKPAEERISLSMKALEEKPEREDRRGNDGSASRADIAAYKQQDDSAATLGD 423 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L G ++EG V +T+FGAFVD+G DGLVH+S +S+ V++P V+ GD V VK+L Sbjct: 228 LSVGEVVEGTVARLTDFGAFVDLG-GVDGLVHVSEISHDRVKNPADVLTKGDKVDVKILA 286 Query: 708 VDLQRKRIALTMR 720 +D ++ RI+L+++ Sbjct: 287 LDTEKGRISLSIK 299 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/77 (49%), Positives = 56/77 (72%), Gaps = 3/77 (3%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 ++ LQPGMI+EG ++N+ +FGAFVD+ G+ DGL+HIS LS V P ++ GD V V Sbjct: 208 LDRLQPGMIVEGTISNIVDFGAFVDLDGI--DGLIHISELSWSHVNHPSEILSIGDTVSV 265 Query: 704 KVLEVDLQRKRIALTMR 720 KVL++D R+RI+L ++ Sbjct: 266 KVLDIDRDRQRISLGLK 282 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 33/67 (49%), Positives = 49/67 (73%) Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 LEG VT V FGAFV+I +GLVHIS L+ VE+P +++ D VKVK+LE+D +R+ Sbjct: 302 LEGRVTKVVTFGAFVEILDGVEGLVHISELAQHHVENPREIIQPNDEVKVKILEIDSERR 361 Query: 714 RIALTMR 720 R++L+++ Sbjct: 362 RLSLSIK 368 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/132 (41%), Positives = 76/132 (57%), Gaps = 8/132 (6%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQPGMILEGA 657 DFTD K T++ ++ EL++ R ++ Q E + L+ G +L+G Sbjct: 137 VEDFTDYKG--KTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGK 194 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V +T+FGAFVDIG DGLVHIS LS+ VE P VV+ G VKVKVL VD +RI+L Sbjct: 195 VQRLTDFGAFVDIG-GIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNERISL 253 Query: 718 TMRLDEQPGETN 729 +++ D PG N Sbjct: 254 SIK-DTLPGPWN 264 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/79 (50%), Positives = 57/79 (72%), Gaps = 1/79 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++PG +LEG V + +FGAFV+I +GLVHIS +SNK + PH V++ G VKVKVL+ Sbjct: 270 VKPGDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLD 329 Query: 708 VDLQRKRIALTMR-LDEQP 725 V+ +RI+L+MR L+E P Sbjct: 330 VNENEERISLSMRELEETP 348 >UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYQ2_PYRTR Length = 1416 Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 97/378 (25%), Positives = 155/378 (41%), Gaps = 55/378 (14%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY 470 ++V++ A +Y S A EFP R +++ R LQ+PLAE + D SI Sbjct: 816 ILVNDEVARLYHTSARAIAEFPKHPALTRYCIALGRYLQNPLAEYASLGKDIVSIPFIPN 875 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDL-----NTASVPLLTRVAGLTRMMAQNIV-AWR 524 Q + Q +L +L+ + D VN VG+DL + L+ V GL A ++ A + Sbjct: 876 QTLIPQDKLLDRLETAMVDMVNLVGIDLPETYDDKYLSKLIPYVCGLGPRKADRLIKAIQ 935 Query: 525 DENGQFQNRQQLLKVSR-------LGPKAFEQCAGFLRINH-----GDNPLDASTVHPEA 572 + + +R LL VS +GPK F+ CA FL I + + LD + VHPE Sbjct: 936 ANSDEILSRFDLLGVSESRDLKAAMGPKVFQNCASFLYIPYDATEESSDYLDYTRVHPED 995 Query: 573 YPVVERILA-------ATQQALKDLMGNSSELRNLKASDFTD---------------EKF 610 Y + +++A +A D G S+ +R + + TD F Sbjct: 996 YDLARKMVADALNMDEEDVKAETDEGGPSAVVRKMVREETTDLVNDLALEDYAAEIERNF 1055 Query: 611 GV---PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 G T+ I EL+ P + R F + + + EG V VT F Sbjct: 1056 GQRKRATLETIRAELDNPYEEIRQMFAMLSGDELFTMLTGETKDSLYEGMVVPVTIRRTF 1115 Query: 668 VD-IGVHQDGLVHISSLSNKFVE-------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 D I V + + ++F E +P V IV+ ++L ++ + L++ Sbjct: 1116 PDHIEVKLECGIEAGVSESEFPEGVGGGGQEPRHVFSTHQIVRARILYLNRKALTAQLSL 1175 Query: 720 RLD--EQPGETNARRGGG 735 R D QP + R G Sbjct: 1176 RGDLIRQPEKKRFERAAG 1193 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 57/78 (73%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + +L+PG I++G V +TNFGAFVD+G DGLVHIS +S +++P V+ GD ++ Sbjct: 473 KVLAELEPGQIIKGTVKRLTNFGAFVDVG-GIDGLVHISEISWHRIDNPGEVLSVGDEIE 531 Query: 703 VKVLEVDLQRKRIALTMR 720 VKV+EV +R+RI L++R Sbjct: 532 VKVIEVIPERERIGLSLR 549 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 64/106 (60%), Gaps = 4/106 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++I E E+ G + AQ E G ++EG VT + +FGAFV++ Sbjct: 534 VIEVIPERERIGLS----LRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGV 589 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GLVHIS L+N V+ P VV+ GD+VKVK+L+++ KR++L+MR Sbjct: 590 EGLVHISQLANYHVKQPSEVVQQGDVVKVKILDINTDGKRVSLSMR 635 >UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5 Tax=Magnoliophyta RepID=B9GLV1_POPTR Length = 1209 Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 150/685 (21%), Positives = 276/685 (40%), Gaps = 114/685 (16%) Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 W D + +PEV A+++ A + +A L GAR+I + + ++ R + A Sbjct: 315 FWEDLNESPEVIASKFTCA--SLETPEAVLKGARHIAALEISCEPSVRKHARGFFTDEA- 371 Query: 190 LVSTVVSGKEEEGAKFRDYFDHH--------EPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 LVST + K GAK D+ +PL + L + + E +L++++ Sbjct: 372 LVSTRPTPK---GAKEIDFCHQFSSVKWLRDKPLGKFQDAQWLRIQKAEEEKLLEVTIRL 428 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRL--NNAPADSW---RKGVVSWTWRIKVLMHLETELM 296 P++S + I H + ++ W RK ++ + +L LE E Sbjct: 429 -------PEDSLNKLISYSHKIYLVGGDDGYTQLWDEQRKLILQDVFSNCLLPSLEKETR 481 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPA-GLRATMGLDPGLRTGVKV------------- 342 + RA+ + + L + AP R GL+ G TG +V Sbjct: 482 VLLTTRAKCLVLMEYGEQLWNRASVAPYPHKRNVAGLEEG--TGPRVMACCWGPGKPPTT 539 Query: 343 -AVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEK-------------HNVELVAIGNG 388 ++D+ G+L+ D + +G + + V L K H +++ +G Sbjct: 540 FVMLDSCGQLL--DVL--QSGSISLRSQNVTGLQRKKYDQLRVHKFIISHQPDVIVLGAA 595 Query: 389 TASRETERFYLDVQKQFPKVTAQKV----IVSEAGA--------SVYSASELAAQEFPDL 436 AS R D+++ K+ + +++ G +Y SE++ + P Sbjct: 596 NAS--CPRLKDDIKEIVLKIEESSIDADQVLNGIGVIYGDETLPQLYEKSEVSLRHLPGQ 653 Query: 437 DVSLRGAVSIARRLQDPLAEL-----VKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCV 491 + ++ AV++ R LQ+PLA + V+ + S + H ++ + ++ ++ D Sbjct: 654 EGIVKRAVALGRYLQNPLAMIATLCGVQKEIVSWKLTSLDHFLTPEEKYGMIEMLMVDIT 713 Query: 492 NAVGVDLNTA------SVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 N VGVD+N A S PL V+GL A + NR++L K Sbjct: 714 NQVGVDINAAVSQDWLSAPL-QFVSGLGSQKAAFLQRELAAGKIVNNRKELAICGLTEKK 772 Query: 546 AFEQCAGFLRINHGD--------NPLDASTVHPEAYPVVERIL------AATQQALKDLM 591 F GFLR+ G+ + LD + +HPE+Y + E+++ A LK + Sbjct: 773 IFFNAVGFLRVCCGEILSFGCEYDMLDGTRIHPESYGLAEKLVKDVYDDVAEAHPLKHVR 832 Query: 592 GNSSELRNLKASDFTDEKFGVP-------TVTDIIKELEKPGRDPRPEF----KTAQFAD 640 N L++ + + D F + T+ DI EL DPR + + +F Sbjct: 833 NNPQLLKDFDINAYAD-NFEIEQGENKKLTLYDIKTELLHGFLDPRRPYEEPTQDEEFCL 891 Query: 641 GVETMND-LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV-VKAG 698 D G I++ V V + AF + G++ S++ + T ++ G Sbjct: 892 ISGKDEDAFAEGRIVQAIVCRVLSQRAFCALDSGLIGMITKDDYSDEAADYSLTKRLREG 951 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDE 723 DI+ K+ ++D R ++ LT + E Sbjct: 952 DILTCKIKQIDKSRHQVLLTCKESE 976 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/87 (49%), Positives = 58/87 (66%), Gaps = 2/87 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +L+PG ++EG V +T+FGAFVD+G DGLVHIS LS V P VV+ GD VKV+ Sbjct: 184 FEELKPGDVIEGTVQRLTDFGAFVDVG-GADGLVHISELSFSHVNHPSEVVREGDRVKVR 242 Query: 705 VLEVDLQRKRIALTMRLD-EQPGETNA 730 VL VD + RI+L+++ +P ET A Sbjct: 243 VLRVDPEAGRISLSIKAALPEPWETYA 269 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 56/80 (70%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++ QPG +++G V V +FGAFV++ +GLVH+S +SN+ V+ P V++ G V V+V Sbjct: 270 HEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVHVSQISNEHVDKPSDVLQPGQEVTVRV 329 Query: 706 LEVDLQRKRIALTMRLDEQP 725 L VD +RKRI+L+MR QP Sbjct: 330 LSVDPERKRISLSMRDSSQP 349 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/106 (43%), Positives = 67/106 (63%), Gaps = 7/106 (6%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 DGVE L G ++EG V +T+FG FV++ DGLVHIS +S+K VE+P V+ G Sbjct: 287 DGVE--QKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRVENPKDVLSVGQ 344 Query: 700 IVKVKVLEVDLQRKRIALTMR-LDEQP----GETNARRGGGNERPQ 740 V VKVLEV+ +R++L+++ L+E+P GE N +R RP+ Sbjct: 345 DVTVKVLEVNADAERVSLSIKALEERPANAEGENNEKRQSRPRRPK 390 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L+ G ++ G V +T+FGAF+D+G DGLVH++ LS++ P +VV GD ++ Sbjct: 203 EVFSKLEVGSVVTGKVARLTSFGAFIDLG-GVDGLVHVTELSHERNVSPKSVVSVGDEIE 261 Query: 703 VKVLEVDLQRKRIALTMR 720 VKVL +D + R++L+++ Sbjct: 262 VKVLAIDEEAGRVSLSLK 279 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 34/70 (48%), Positives = 51/70 (72%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+EG V +T FGAFV++ DGL+HIS ++++ + +P VV GD+VKVKV+ VD Sbjct: 316 GAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADRRINNPGEVVSIGDVVKVKVINVDA 375 Query: 711 QRKRIALTMR 720 Q +RI+L++R Sbjct: 376 QNRRISLSLR 385 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 52/73 (71%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 +Q G +LEG V ++T+FGAF+D+G DGL+HIS +S ++ P VV G+ +KVKVL Sbjct: 228 VQEGDVLEGTVKSITDFGAFIDLG-GVDGLLHISEMSYGRIKHPSQVVSEGERIKVKVLR 286 Query: 708 VDLQRKRIALTMR 720 +D ++ +++L ++ Sbjct: 287 LDREKGKVSLGLK 299 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E +QPG +EG V +TNFGAFVD+G DGLVH+S +S V+ P V+K G +K Sbjct: 195 EIFAKIQPGDTVEGKVARLTNFGAFVDLG-GVDGLVHVSEISFDHVDKPSDVLKVGQEIK 253 Query: 703 VKVLEVDLQRKRIALTMR 720 VKVL VD R RI+L+++ Sbjct: 254 VKVLNVDPDRNRISLSIK 271 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G +L G V +T FGAFV++ +GLVHIS +S++ V P V+K G V+VKVL VD Sbjct: 288 GSVLTGTVKRLTTFGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDP 347 Query: 711 QRKRIALTMR-LDEQPG--ETNARRGGGNER 738 R+AL+++ L E+P E + GG + R Sbjct: 348 DAHRLALSIKALQERPAGSEEESHEGGNSSR 378 >UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL Length = 392 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 2/83 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T N+++ G +++G V +T+FGAFVD+G DGLVHIS +S + V P V+ GD VK Sbjct: 180 TFNNIEIGSVVDGIVRRLTDFGAFVDVGA-VDGLVHISQISWQRVNHPSDVLNIGDEVKC 238 Query: 704 KVLEVDLQRKRIALTMRLDEQPG 726 KVL+ D + RI+L++R D QPG Sbjct: 239 KVLKFDRESGRISLSIR-DTQPG 260 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 45/67 (67%) Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I++G V + +FGAFV+I +GL+HIS +S++ + P ++K G + VK+L VD Sbjct: 274 IVKGVVKRLVSFGAFVEILPGVEGLMHISEISHRHIVTPSEILKEGQEILVKILNVDSNA 333 Query: 713 KRIALTM 719 +R++LTM Sbjct: 334 RRVSLTM 340 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 49/77 (63%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 M Q G I+EG V + FGAFV+I DGLVHIS L+N VE P VV+ + +K+ Sbjct: 589 VMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVHISQLANHRVEKPEDVVQVNEKIKI 648 Query: 704 KVLEVDLQRKRIALTMR 720 K+L +D + KRI L+++ Sbjct: 649 KILSIDPEEKRIGLSLK 665 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 19/74 (25%), Positives = 52/74 (70%), Gaps = 1/74 (1%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +++ G + +G + + ++GAF+D+G ++ GL+H+S +++ ++ P V++ G+ + V +L Sbjct: 507 EIEEGQVRKGRIKRLVDYGAFIDLGGYE-GLLHVSEIAHTRIDQPSDVLQEGEEIDVYIL 565 Query: 707 EVDLQRKRIALTMR 720 +D +++R++L+ + Sbjct: 566 ALDREKERVSLSRK 579 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L G ++EG V+ +TNFGAF+D+G DGLVHIS +S K V+ P V+KAG VKVKV+ Sbjct: 195 LVVGDVIEGKVSRLTNFGAFIDVG-GVDGLVHISEISYKHVDKPSDVLKAGQDVKVKVIG 253 Query: 708 VDLQRKRIALTMRLDE 723 +D R RI+L+++ E Sbjct: 254 IDDDRHRISLSIKQTE 269 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL G + EG V ++TNFGAFV++ GLVH+S +SNK V+ P V+K VKVKVL Sbjct: 279 DLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEISNKHVDKPSDVLKVDQTVKVKVL 338 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMD 763 +D +RI+L+++ ++NA +N + R R N M D Sbjct: 339 NIDPSDRRISLSIK----AADSNA-------SSSDNHSSRPRRSRNENSVNNKYMGD 384 >UniRef50_A9SG12 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SG12_PHYPA Length = 421 Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 40/82 (48%), Positives = 52/82 (63%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G + G V +V ++GAFVDIG DGLVHIS L+ KFV++ VV G V V+VLE++ Sbjct: 137 GAVFTGKVRSVQSYGAFVDIGAFTDGLVHISELAPKFVKEVTDVVSIGQEVTVRVLELNE 196 Query: 711 QRKRIALTMRLDEQPGETNARR 732 + RIALTMR E E + R Sbjct: 197 KAGRIALTMRDRENEEEEQSSR 218 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 34/72 (47%), Positives = 50/72 (69%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 QPG ++ GAVT +TNFG FV + +GL+HIS L++ VE+P VVK GD + VK+L V Sbjct: 477 QPGQVVSGAVTKITNFGVFVGLEDGLEGLLHISELADHKVENPEDVVKVGDKIDVKILRV 536 Query: 709 DLQRKRIALTMR 720 D+ ++I L+ + Sbjct: 537 DIDERKIGLSRK 548 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 2/75 (2%) Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 I+EG V N+TN+GAFV++ DGL+H+S +S + + P +++ G V+ K+L VD + Sbjct: 393 IVEGKVRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKGQPVRCKILSVDQE 452 Query: 712 RKRIALTMR-LDEQP 725 R+RIAL ++ LDE P Sbjct: 453 RRRIALGLKQLDEDP 467 Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + +L+ G + +G V N+ FGAFVD+G DGL+HI+ +S + + P +V ++V Sbjct: 213 LKELEIGQVRKGVVKNIAEFGAFVDLG-GIDGLLHITDMSWERIGHPSEMVAIDQEIEVM 271 Query: 705 VLEVDLQRKRIALTMRLDE 723 VL +D ++K+IAL ++ E Sbjct: 272 VLHIDREKKKIALGLKQKE 290 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G +++G+V NV ++GAFV + +GLVHIS +S + V P +V GD + V +L VD Sbjct: 304 GTVVKGSVVNVMSYGAFVKLEPGIEGLVHISEMSWTRRVNHPSELVNIGDEISVVILGVD 363 Query: 710 LQRKRIALTMR 720 ++++L M+ Sbjct: 364 KDGQQLSLGMK 374 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 41/73 (56%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L G ++EG V +TNFGAFVDIG DGLVHIS LS V+ P VV AGD VKV+VL Sbjct: 462 LHIGDVIEGTVQRLTNFGAFVDIG-GIDGLVHISELSWNRVKHPSEVVSAGDKVKVQVLS 520 Query: 708 VDLQRKRIALTMR 720 +D ++ RIAL ++ Sbjct: 521 LDEEKDRIALGLK 533 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 12/121 (9%) Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 N+ +FGAFV + DGL+H+S + + +E P ++ G V+VKV+E+D + K+I+L++ Sbjct: 559 NILDFGAFVRLEEGVDGLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSI 618 Query: 720 RL------DEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG----NSAMMDALAAAM 769 + D++ E + ERP+ RP ++ Q N+ + D L ++ Sbjct: 619 KALLEPIEDDENKEKTEKPKVKKERPR--RPKENRVKKQIQEPKEDEFNTTIGDLLGFSI 676 Query: 770 G 770 G Sbjct: 677 G 677 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 38/76 (50%), Positives = 52/76 (68%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L+PG + G VT++ +FGAFVDIG DGLVH+S LS V+ P V+K GD V V Sbjct: 228 LEKLEPGAVRTGRVTSLCDFGAFVDIG-GADGLVHLSELSWSRVKHPEEVLKVGDAVSVY 286 Query: 705 VLEVDLQRKRIALTMR 720 +L VD +KRIAL+++ Sbjct: 287 ILSVDEDKKRIALSIK 302 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/72 (40%), Positives = 45/72 (62%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 Q G + G VT +T FGAFV + +GL+HIS +S++ ++ P V+ GD V +++ + Sbjct: 317 QIGQSVSGVVTQLTAFGAFVRLEDGIEGLIHISEMSDERIQHPRDVINEGDSVSARIIRI 376 Query: 709 DLQRKRIALTMR 720 D RKRI L+ R Sbjct: 377 DPTRKRIGLSTR 388 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L G ++EG V +TNFGAFVDIG DGLVH+S LS++ V+ P VV G+ V Sbjct: 186 ELLESLNEGDVIEGKVARLTNFGAFVDIG-GVDGLVHVSELSHEHVKSPEDVVSIGETVN 244 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 VK+ VD +RI+L+++ D P + +G NE Sbjct: 245 VKIKSVDKDSERISLSIK-DTLPSPFESIKGEFNE 278 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 48/74 (64%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 + G ++EG V + NFGAFV+I GLVHIS +S+ + P ++ G +V VKVL Sbjct: 275 EFNEGDVIEGTVVRLANFGAFVEIKPGVQGLVHISEISHSHIGSPSEALEPGQVVSVKVL 334 Query: 707 EVDLQRKRIALTMR 720 VD++ +RI+L+++ Sbjct: 335 GVDVENERISLSIK 348 >UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma mansoni RepID=C4QPS3_SCHMA Length = 1408 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 78/283 (27%), Positives = 135/283 (47%), Gaps = 43/283 (15%) Query: 422 VYSASELAAQEFP-DLDVSLRGAVSIARRLQDPL---AELVKIDPKSIGVGQY--QHDVS 475 V++ S A+ + P + LR A+S+ RRLQDPL A+LV I+ + +G+ + Q + Sbjct: 774 VFALSSRASFDLPISYPLLLRQAISLGRRLQDPLFEFAQLVTIENEILGIRWHPLQDSLP 833 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGL-TRMMAQNIVAWRDENGQ 529 + L R L+ + VN VGVD+N + ++ ++GL R + + + Sbjct: 834 RDMLLRALEIEFINRVNEVGVDVNRCLSHPHTAGVIQFISGLGPRKGLHMLKILKHKKTH 893 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPEAYPVVERIL 580 NR QL+ + GP+ CAGF++I+ + LD++ VHPE+Y + +++ Sbjct: 894 LTNRMQLVTMIEFGPRVVINCAGFIKIDTSSVRDLDADDVDLLDSTRVHPESYDLAKKMA 953 Query: 581 AATQQ-----------ALKDLMGNSSELRNLKASDFTDE----KFGVPTVT--DIIKELE 623 + AL++++ + + LR L F +E + G +T DI KEL Sbjct: 954 VDALEYDDTEECDPTVALEEIVHSPARLRELDLDAFAEELKRQEHGDKHITLYDIRKELN 1013 Query: 624 KPGRDPRPEFKTAQ----FADGV-ETMNDLQPGMILEGAVTNV 661 RD R +++A F+ ET L G ++E V +V Sbjct: 1014 NRYRDYREAYQSANPESIFSMVTHETPETLHVGRLVECRVLSV 1056 >UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Saccharomycetaceae RepID=SPT6_YEAST Length = 1451 Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 35/229 (15%) Query: 384 AIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV------------YSASELAAQ 431 AIG + +T++FY K+ +V +K IV G ++ Y SE AAQ Sbjct: 810 AIGINGPNPKTQKFY----KRLQEVLHKKQIVDSRGHTIPIIYVEDEVAIRYQNSERAAQ 865 Query: 432 EFPDLDVSLRGAVSIARRLQDPLAELVKI---DPKSIGVGQYQHDVSQTQLARKLDAVVE 488 EFP+ ++ +++AR + PL E + + +S+ + +Q+ +S QL+ L+ Sbjct: 866 EFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRSLSIHPHQNLLSSEQLSWALETAFV 925 Query: 489 DCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQNIV-AWRDENGQFQNRQQLLKVSRL 542 D VN V V++N A+ L ++G + A + + + + N RQQL+ + L Sbjct: 926 DIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDFLQSLQRLNEPLLARQQLITHNIL 985 Query: 543 GPKAFEQCAGFLRINHGD----------NPLDASTVHPEAYPVVERILA 581 F AGFL I+ + + LD++ +HPE Y + ++ A Sbjct: 986 HKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIHPEDYHLATKVAA 1034 >UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S561_TRIAD Length = 1541 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/306 (25%), Positives = 134/306 (43%), Gaps = 43/306 (14%) Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 L ++ P ++ + ++ ++ +S+ A EFP+ L A+S+AR +Q+PL EL Sbjct: 746 LQSEEDLPPISVE--LIDPCIPRLFESSKRAKNEFPEYPPLLCHAISLARYMQEPLLELS 803 Query: 459 KI---DPKSI---GVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLT 507 ++ D + I + Q ++ + L L +C+N +G+DLN LL+ Sbjct: 804 QLLTSDDEEILCLRLHILQAEIPKPDLMEALYIEFINCINDIGIDLNLCLTNERYSSLLS 863 Query: 508 RVAGL-TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI--NHGDNP-- 562 V GL R + + N + +NR+ L+ +GP F CAGF++I N D+ Sbjct: 864 FVCGLGPRKATALLKLLKKGNLRLRNRKSLVTECGMGPNLFVNCAGFIKIPTNKVDDSDY 923 Query: 563 ---LDASTVHPEAY--------------PVVERILAATQQALKDLMGNSSELRNLKASDF 605 LD + +HPEAY E I AT + D++ +L++L F Sbjct: 924 AEILDTTRIHPEAYDWARKMAIDALDYDESAEEINQAT--VVHDIIDQPDKLKDLDLDAF 981 Query: 606 TDE----KFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 +E FG +VT DI +EL ++ R F + + + D P + G + Sbjct: 982 AEELKRQGFGNKSVTLYDIREELTHRYKECRQPFDSLSPGEVFYLLVDETPESLCYGQLI 1041 Query: 660 NVTNFG 665 G Sbjct: 1042 TCRVIG 1047 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 2/84 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E ++ L+ G ++EG V +T+FGAFV++G DGLVHIS +S++ VE P V++ G VK Sbjct: 181 EAISSLKEGDVVEGTVQRLTDFGAFVNVG-GVDGLVHISQISHERVEQPSEVLEQGQKVK 239 Query: 703 VKVLEVDLQRKRIALTMRLDEQPG 726 VKVL VD +RI+L+++ QPG Sbjct: 240 VKVLSVDADTQRISLSIKA-AQPG 262 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 53/74 (71%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +++ G I EG V + FGAFV+I +GLVH+S ++N+ V++P+ V++ G VKVKVL Sbjct: 270 EVKAGDIREGIVKRLVTFGAFVEILPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVL 329 Query: 707 EVDLQRKRIALTMR 720 EV + KRI+L+++ Sbjct: 330 EVHVAEKRISLSIK 343 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 2/83 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T N ++ G + +G V ++T+FGAFVDIG DGL+HIS LS V+ P V+K GD V+V Sbjct: 477 TWNSMEVGKVFKGTVKSLTDFGAFVDIG-GVDGLIHISELSWTRVKHPSEVLKVGDEVEV 535 Query: 704 KVLEVDLQRKRIALTMR-LDEQP 725 VLE D ++K+++L R +++ P Sbjct: 536 TVLEFDKEKKKVSLGYRKMEDNP 558 Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 57/105 (54%), Gaps = 7/105 (6%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G +++ V FGAFV++ DGLVHIS +S+K + ++ G V K++EVD Sbjct: 569 GDVVKVTVLRFAPFGAFVELEKGVDGLVHISQISSKRLAKVEDALEIGMKVDAKIIEVDG 628 Query: 711 QRKRIALTMR----LDEQPGETNARRGGGNERPQ---NNRPAAKP 748 + K+I+L+++ +D ++ ++ G+E + N A+P Sbjct: 629 ENKKISLSIKEVMPIDPPSSKSESKAKDGSEAKETSANTEEEAEP 673 >UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VJC0_NAEGR Length = 1296 Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 142/659 (21%), Positives = 244/659 (37%), Gaps = 125/659 (18%) Query: 136 HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL-VSTV 194 H + A+A V+ + ++ L GAR+I + A + + VR N+ + V Sbjct: 398 HALDPASAAEVFKTRTFESIESVLGGARHICAFQIAHEPKIRQLVRRCFENNSTIKVKLT 457 Query: 195 VSGKEEEGA--------------KFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 GK EG+ KFRD + H + L + + N G++++SL Sbjct: 458 KKGKSVEGSDIISLLEDGRTMFTKFRDEWAAHVRYAHDNKESFLKLLKYENLGLIKVSLF 517 Query: 241 -ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTW---RIKVLMHLETELM 296 D FD GL + S + ++ W RIK++ + L Sbjct: 518 LEDRHFD----------------GLLKADVLYLSQKHSQIATLWNEQRIKIIEEAKGILN 561 Query: 297 GTV--------RERAEDEAINVFARNLHDLLMA-APAG--LRATMGLD------------ 333 T+ R +A D ++ NL +L +P G RA D Sbjct: 562 KTIQHSVKTILRNKAADFVSDLCESNLTKMLFEESPYGNNPRAKFDYDEFFEDEKPRPTK 621 Query: 334 -------PGLRTGVKVAVV--DATGKLVATDTI---YPHT-GQAAKA--------AMTVA 372 PG G K V D G ++ +PHT G + + +V Sbjct: 622 YKILSCVPGGEEGEKTTWVMLDENGTMIDKKVWPIGHPHTTGNTSDSDRQLIDSMVKSVN 681 Query: 373 ALCEKHNVELVAIG--NGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAA 430 + H +VA+ G ++ + + ++ IV + A +Y S A Sbjct: 682 DMIASHQPSVVALAACGGLIFKKMKEAFERTKQGGTIFNINYEIVPDDIARIYENSSRAT 741 Query: 431 QEFPDLDVSLRGAVSIARRLQDPLAELVKI----DPKSIGVGQYQHDVSQTQLARKLDAV 486 E+P + +R A+S+ RRL+DPL E+ + + + Q V + QL + L+ Sbjct: 742 NEYPQENNVVRRAISVGRRLRDPLTEICGLFNNEELLCYKFHELQDMVPKEQLVKSLEKS 801 Query: 487 VEDCVNAVGVDLNTASV-----PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 + VN VGV++N + P L ++GL A+ ++ + +R+ + + Sbjct: 802 LVRVVNRVGVEINRIVLFPQLQPTLRFLSGLGPRKAELLINKIKQEDSVSDRESINNILN 861 Query: 542 LGPKAFEQCAGFLRIN------------HGDNPLDASTVHPEAYPVVERILA-------A 582 GFL + +DA+ VH +YP+ +++ Sbjct: 862 EQRNVALNSIGFLIVRRPPTIAARDSMARAFKVIDATRVHLLSYPLAKKMAEDGLETENL 921 Query: 583 TQQALKDLMGNSSELRNLKASDFTDE----KFGVPTVT--DIIKELEKPGRDPRPEFKTA 636 + + + L L + DE +G +T DI +EL+ P +DPR EFK+ Sbjct: 922 KTEKIHKIFKKPQALDELDLDAYADELEKRNYGKTHITLKDIKEELKYPFKDPRYEFKSI 981 Query: 637 QFAD-------GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV 688 D ET L PG + V V F + +GL + +L N+ V Sbjct: 982 NNDDEKVFELVTHETKKSLAPGQQVFATVVTVGERIIFCKL---DNGLYGVIALYNRNV 1037 >UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Filobasidiella neoformans RepID=SPT6_CRYNE Length = 1506 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 63/265 (23%), Positives = 111/265 (41%), Gaps = 44/265 (16%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 + V++A A +Y +SE A +E P+L ++ R A+ +AR Q+PL K+ V +H Sbjct: 842 IFVNDATARLYMSSEEAEKEHPNLPLNGRYALGLARYAQNPLNAYCKLGKHIASVTFMEH 901 Query: 473 D---VSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMMAQNIVAWR 524 + Q +L L+ + + V +G+++N+ +L +AGL A ++ Sbjct: 902 HQKLIPQEKLLYHLERGLVNSVCFMGIEINSCVADPYQRAMLPYIAGLGPRKADAVIYGI 961 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI--------------NHGDNPLDASTVHP 570 ++G NR + GP FE AGFL I +PLD + +HP Sbjct: 962 QKHGALINRMAFTDLGLFGPTIFENTAGFLTIESDLKDMMLEAENPQEQPDPLDMTRIHP 1021 Query: 571 EAYPVVERILA-------------ATQQALKDLMGNSSELRNLKASDFTDEKFGVP---- 613 E Y +++ + ++ LM + + L + D F + Sbjct: 1022 ENYEFAQKMCQDALDLDVEDVADRHKSEVVQTLMLDDKRGKKLGELNLDDFAFNLQRQGE 1081 Query: 614 -----TVTDIIKELEKPGRDPRPEF 633 T+ +I+ EL + D RP F Sbjct: 1082 GNKRHTLGEIVSELIRYRSDRRPAF 1106 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 2/89 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + +LQ G L+G V N+T++GAFVD+G DGL+HI+ ++ K V+ P VV+ GD + VK Sbjct: 110 LENLQEGQELKGVVKNLTDYGAFVDLG-GIDGLLHITDMAWKRVKHPSDVVQIGDEITVK 168 Query: 705 VLEVDLQRKRIALTMR-LDEQPGETNARR 732 VL+ D +R R++L ++ + + P ARR Sbjct: 169 VLKFDRERNRVSLGLKQMGDDPWVALARR 197 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/78 (47%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + LQ G I++G V +TNFGAFVD+G DGL+HIS +S + P VVK GD ++ Sbjct: 463 ELLASLQEGQIVKGIVRRITNFGAFVDLG-GLDGLLHISEMSWHRINHPQEVVKVGDELE 521 Query: 703 VKVLEVDLQRKRIALTMR 720 V VL+VD Q ++I+L ++ Sbjct: 522 VMVLKVDTQNEKISLGLK 539 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 14/102 (13%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I V + FGAFV + +GLVHIS L+++ VE P VVK G+ V+VKVL +D Sbjct: 556 GNIFNAKVVRLAPFGAFVQLEPGVEGLVHISHLADRHVEKPEDVVKEGEEVQVKVLSMDP 615 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGRE 752 KR+ L++R E N R E A+PR +E Sbjct: 616 SEKRVRLSIR------EVNGERRSARE--------ARPRKQE 643 >UniRef50_UPI0001C36465 polynucleotide phosphorylase/polyadenylase n=1 Tax=Clostridium hathewayi DSM 13479 RepID=UPI0001C36465 Length = 192 Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 5/85 (5%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + D++PG +++G V + NFGAFV++ ++DG+VHIS LS+K VE V GD V V+ Sbjct: 68 VTDIEPGAVMKGKVVRIMNFGAFVELAPNKDGMVHISKLSDKRVEKVEDAVNIGDEVTVR 127 Query: 705 VLEVDLQRKRIALTMRLDEQPGETN 729 VLEVD + RI L+M+ PG+ + Sbjct: 128 VLEVD-KMGRINLSMK----PGDMD 147 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++ L+ G +L+G V + +FG FVD+G DGLVHIS LS+ V P VVK GD VKVK Sbjct: 187 LSRLEAGQVLDGVVRRIADFGVFVDVGGF-DGLVHISQLSHTRVAHPSEVVKEGDAVKVK 245 Query: 705 VLEVDLQRKRIALTMR 720 VL VD ++ R++L+++ Sbjct: 246 VLAVDPEQGRLSLSIK 261 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 50/73 (68%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++P ++ G V + +FGAFV+I +GLVH+S ++N+ + PH V+K GD VK KVL+ Sbjct: 275 VKPSDVVTGTVKRLASFGAFVEIFPGVEGLVHVSQIANRRIGSPHEVLKEGDEVKAKVLD 334 Query: 708 VDLQRKRIALTMR 720 V+ RI+L++R Sbjct: 335 VNEAEHRISLSIR 347 >UniRef50_UPI00016BFB5D hypothetical protein Epulo_08978 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB5D Length = 131 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 37/101 (36%), Positives = 62/101 (61%), Gaps = 5/101 (4%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G ILEG VT + FGAF+ + +GLVHIS +++ ++E+ +K GD+VKVKVL Sbjct: 5 IEVGQILEGTVTGIKPFGAFISLPNSYNGLVHISHITHGYLENIADAIKIGDVVKVKVLT 64 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 VDL +I+L+++ + + R +P+ N+P +P Sbjct: 65 VDLTNNKISLSIKEALEKPKQEER-----PKPRYNKPKKEP 100 >UniRef50_B7G261 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G261_PHATR Length = 446 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 8/114 (7%) Query: 614 TVTDIIKELEKPGR--DPRPEFKTA------QFADGVETMNDLQPGMILEGAVTNVTNFG 665 T++D E GR DP P KT ++ G + + D + G G V FG Sbjct: 228 TLSDTKAENATGGRVGDPDPTNKTTTRQDDNRYCRGRKPVTDFRVGESYPGKVVYSKQFG 287 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 F+DIG H D H+S + FVE V + GD V ++LE+D +RKRI +++ Sbjct: 288 VFLDIGSHSDAFCHVSRCQDDFVESAEAVHRPGDEVSARILEIDKRRKRITVSL 341 >UniRef50_B0MBX8 Putative uncharacterized protein n=7 Tax=Clostridiales RepID=B0MBX8_9FIRM Length = 309 Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 2/87 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++PGM+LEG V N+ +GAFVD+G GL+HIS S K ++ P +V+ G VKVKVL+ Sbjct: 203 MRPGMVLEGTVENIMPYGAFVDLGDGLSGLIHISQFSEKRIKSPKEMVEEGQKVKVKVLK 262 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGG 734 + +I+L+M+ E+ E G Sbjct: 263 I--ADNKISLSMKALEESREAEKVETG 287 >UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula baltica RepID=Q7UWH7_RHOBA Length = 560 Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + ++PG ILEG V +V +FGAFVD+G DGL+H+S LS + ++ P V++ G VK Sbjct: 347 EQLEKIEPGDILEGVVRSVRDFGAFVDVG-GLDGLIHVSKLSWERIKHPSEVIEEGQNVK 405 Query: 703 VKVLEVDLQRKRIALTMR 720 V+V ++D Q +++LT R Sbjct: 406 VRVDKIDKQTGKMSLTYR 423 Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 D E+M G + +G VT FGAFV + +GL HIS L+ V +VV GD Sbjct: 431 DSAESM--FAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISELATHRVSRVSSVVNVGD 488 Query: 700 IVKVKVLEVDLQRKRIALTMR 720 V VK++ D +++ L+++ Sbjct: 489 EVDVKIMSFDRDSQKVGLSIK 509 >UniRef50_A2FJA8 S1 RNA binding domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2FJA8_TRIVA Length = 125 Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/74 (50%), Positives = 53/74 (71%), Gaps = 1/74 (1%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL PG I+EG VT V FGAFVD+ + GLVHIS +++ FV++ + + GD VKVKVL Sbjct: 2 DLSPGDIVEGVVTKVAKFGAFVDLKDGKSGLVHISEIADTFVKNINNHISEGDEVKVKVL 61 Query: 707 EVDLQRKRIALTMR 720 +D +R +IAL+++ Sbjct: 62 SID-ERGKIALSIK 74 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 2/90 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ ++ G ++EG V N+T +G FVD+G DGL+HI+ +S V+ P + G + V Sbjct: 234 TLQNIHEGKVVEGVVKNITEYGVFVDLG-GIDGLLHITDISWGRVKHPSELFGVGQTITV 292 Query: 704 KVLEVDLQRKRIALTMR-LDEQPGETNARR 732 KVL++DL+R+R++L M+ L E P T + R Sbjct: 293 KVLDLDLERERVSLGMKQLKEDPWTTASDR 322 Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G +EG + N+T+FG F+ I DGLVHIS +S K + P V K GD V+ VL +D Sbjct: 413 GTTIEGRIKNITDFGMFIGIDEGIDGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHID 472 Query: 710 LQRKRIALTMR-LDEQPGETNARR 732 + +R +L ++ L+ P ET + R Sbjct: 473 RENERFSLGIKQLEPDPWETISER 496 Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/119 (32%), Positives = 68/119 (57%), Gaps = 7/119 (5%) Query: 640 DGVETMND-LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 D ET+++ Q G + G +T+VT+FG FV++ +GLVH+S ++ + V+ P G Sbjct: 488 DPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSEVAKEKVKTPVGQFNVG 547 Query: 699 DIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPA 756 D V+ V+ ++ + +RI L++ RL+E + + G NE +N+PA+ G Q A Sbjct: 548 DTVETVVVNINPKERRIGLSIKRLEE-----DEQEGYFNEYMASNKPASSALGEAFQRA 601 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Query: 644 TMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIV 701 T +D P G + G V ++T++GAFV++ +GL+H+S +S + + P VV GD + Sbjct: 318 TASDRYPVGERVSGKVVSLTDYGAFVELEEGIEGLIHVSEMSWTRKIRHPSKVVSVGDDL 377 Query: 702 KVKVLEVDLQRKRIALTMR 720 + VL++ +R++L M+ Sbjct: 378 EAVVLDIKPSNRRVSLGMK 396 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 59/93 (63%), Gaps = 2/93 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+EG + + FGAFV++ +GLVHIS L+++ V+ P VV GDI+ VKVL VD Sbjct: 623 GTIVEGKILRLAPFGAFVEVEPGIEGLVHISQLADRHVDKPEDVVSIGDIIPVKVLGVDQ 682 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 Q +R++L++R + E N ++ E+P N+ Sbjct: 683 QAQRMSLSLR--QAIREKNRKQAKPAEKPAENQ 713 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T N L+ G + +G V +TNFGAFVD+G DGL+H+S +S VE P + G ++V Sbjct: 531 TWNSLEVGQVRKGIVRRLTNFGAFVDLG-GVDGLLHVSEISWGRVEHPRDALSEGQEIEV 589 Query: 704 KVLEVDLQRKRIALTMR-LDEQPGETNARR 732 K+L +D + +++L + L P +T A R Sbjct: 590 KILGIDREEGKVSLGRKQLLPNPWDTAAER 619 Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 29/96 (30%), Positives = 49/96 (51%) Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 PG PE + + M +L+ G ++ G V +T+ VD+G +G++ ++ LS Sbjct: 339 PGETGTPEEQRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELS 398 Query: 685 NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 ++ V DPH VV GD + V VL + + L+ R Sbjct: 399 HRNVTDPHEVVAVGDTINVMVLRPENEEGHPVLSKR 434 >UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBU2_THET1 Length = 431 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + +L+ G I++G VT++ +FGAFVDIG DGL+H+S +S + P V+K GD V V Sbjct: 254 IEELREGQIVKGRVTSLADFGAFVDIG-GADGLIHLSEISWGRINHPSEVLKPGDEVDVM 312 Query: 705 VLEVDLQRKRIALTMR 720 VL +D + K+IAL+M+ Sbjct: 313 VLNIDREHKKIALSMK 328 Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 7/75 (9%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+EG VT + FG FV + +GLVH+S L + T V+ GD ++++V+++D Sbjct: 345 GQIVEGEVTQIAPFGVFVRLEDGIEGLVHMSELGD-------TKVQVGDKLRLRVIKMDT 397 Query: 711 QRKRIALTMRLDEQP 725 QR+RI L++R ++P Sbjct: 398 QRRRIGLSVRQLDEP 412 >UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflexi (class) RepID=A9B766_HERA2 Length = 397 Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L+PG ++ G V +T FGAF+D+G DGL HIS LS + V P V++ G V+V Sbjct: 204 LETLEPGAVVTGRVNQLTPFGAFIDLG-GADGLAHISELSWQRVNHPREVLQPGQEVQVY 262 Query: 705 VLEVDLQRKRIALTMR 720 VLEVD R+RI L++R Sbjct: 263 VLEVDRDRERIGLSLR 278 >UniRef50_A7GUA8 RNA binding S1 domain protein n=7 Tax=Bacillales RepID=A7GUA8_BACCN Length = 133 Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 31/70 (44%), Positives = 51/70 (72%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G+I++G VT + ++GAFV + GLVHIS ++N +V+D H +K GD V+VKVL VD Sbjct: 27 GVIVKGKVTGIQDYGAFVALDDETQGLVHISEITNGYVKDVHDYLKIGDTVEVKVLSVDE 86 Query: 711 QRKRIALTMR 720 + K+++L+++ Sbjct: 87 EHKKMSLSLK 96 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +N ++PG G V+ + FGAFVD+G DGL+H+S LS K V +P VV GD V+V Sbjct: 196 LNSIKPGEKRSGVVSRLAKFGAFVDLG-GVDGLIHVSELSWKRVNNPADVVSVGDKVEVY 254 Query: 705 VLEVDLQRKRIALTMR-LDEQPGET 728 +L VD + +IAL ++ ++E P E+ Sbjct: 255 ILSVDKENNKIALALKDVNENPWES 279 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 50/75 (66%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 N + G ++EG V + +FGAFV+I +GLVHIS +S + + P V+ GD V+VK+ Sbjct: 282 NKFKIGDVVEGEVLKLASFGAFVEIQPGVEGLVHISEISEERIAKPSDVLNLGDKVRVKI 341 Query: 706 LEVDLQRKRIALTMR 720 L++D + RI+L+++ Sbjct: 342 LDIDNKENRISLSIK 356 >UniRef50_B1YKU0 RNA binding S1 domain protein n=3 Tax=Bacillales RepID=B1YKU0_EXIS2 Length = 130 Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 2/121 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M + + ++ G VT + NFGAFV + GLVHIS +S+ +V+D + VK GD V VK Sbjct: 1 MANFEKDQVVTGKVTGIQNFGAFVALDEQTQGLVHISEISHDYVKDINDYVKVGDEVTVK 60 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 VL++D K++ L+++ ++ + AR G R R A P ++ + G + + Sbjct: 61 VLDIDEANKKMKLSIKATQEAPKREARAKG--PRKNAGRRDAGPAFKQEEAPGFNVLKGK 118 Query: 765 L 765 L Sbjct: 119 L 119 >UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O80815_ARATH Length = 1684 Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 184/805 (22%), Positives = 320/805 (39%), Gaps = 164/805 (20%) Query: 36 FIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKS--ISEQGKLTDDLAKAINA 93 + RY +E D+T+L NL YL E +++KS ++E + DD+ N Sbjct: 457 YTKRYEEESRRVYDETRL-NLN---QYLFE------SVIKSLKVAETEREVDDVDSKFNL 506 Query: 94 TLSKTELEDLYLPYK-PKRRTRGQIAIEAGL--------------------EPLADLLWS 132 E+ YK PKR+++ I +AGL E L D L Sbjct: 507 HFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDEL-E 565 Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 D TPE A +V A ++ A L GAR++ + + ++ VR +NA +VS Sbjct: 566 DAKETPEEMAKNFVCA--MFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENA-VVS 622 Query: 193 TVVSGKEEEGAKFRDYFDH--------HEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 T + +G D F +PLS + L + +G E +LQ++ Sbjct: 623 TSPTA---DGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVT------ 673 Query: 245 FDEPPKESYCEQIIMD----HLGLRLNNAPADSW---RKGVVSWTWRIKVLMHLETELMG 297 F P E+Y ++I D +L + ++ A W RK ++ +L +E E Sbjct: 674 FKLP--ENYMNRLISDCNEHYLSVGVSKY-AQLWNEQRKLILEDALHAFLLPSMEKEARS 730 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRAT-MGLD-------------PGLRTGVKVA 343 + RA+ ++ + + L + + A P + + LD PG V Sbjct: 731 LLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTFV- 789 Query: 344 VVDATGKLVATDTIYP----------HTGQAAKAAMT-VAALCEKHNVELVAIG--NGTA 390 ++D++G+++ D +Y + Q K+ V H +VA+G N + Sbjct: 790 MLDSSGEVL--DVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSC 847 Query: 391 SRETERFY---LDVQKQFPKVTAQK------VIVSEAGASVYSASELAAQEFPDLDVSLR 441 +R + Y + ++ P+ V V E+ +Y S ++ ++ P ++R Sbjct: 848 TRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVR 907 Query: 442 GAVSIARRLQDPLAELVKI-DPKSIGVGQYQHDVSQ-TQLARKLDAVVEDCVNAVGVDLN 499 AV++ R LQ+PLA + + P + H + QL K V + V VD+ Sbjct: 908 RAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQ-----VMVDIT 962 Query: 500 TASVPLL--TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 + L + A L R + + G R+ L+ + LG K F AGFLRI Sbjct: 963 NQFISGLGPRKAASLQRSLVRA--------GSIFVRKDLI-MHGLGKKVFVNAAGFLRIR 1013 Query: 558 HGD---------NPLDASTVHPEAYPVVERILA----------------ATQQALKDLMG 592 + LD + +HPE+Y + + + A + A++ + Sbjct: 1014 RSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRD 1073 Query: 593 NSSELRNLKASDFTDEK---FGVPTVTDIIKELEKPGRDPRPEFKTAQ-----FADGVET 644 + LR + ++ K T ++II+EL +D R FK + ET Sbjct: 1074 RPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGET 1133 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV------KAG 698 + + G I++ +V + N A I V GL + + F +D +V K G Sbjct: 1134 EDTIAEGRIVQASVRRLQNGRA---ICVLDSGLTGM-LMKEDFSDDGRDIVDLADQLKEG 1189 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDE 723 DI+ K+ + QR ++ L + E Sbjct: 1190 DILTCKIKSIQKQRYQVFLICKESE 1214 >UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteria RepID=RS1_BUCBP Length = 566 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 56/79 (70%), Gaps = 2/79 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 LQ G+I+ G V N+T++GAFVD+G DGL+HI+ ++ K V+ P +V GD VK+K+L+ Sbjct: 189 LQEGLIVSGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKILK 247 Query: 708 VDLQRKRIALTMR-LDEQP 725 D ++ R++L ++ L + P Sbjct: 248 FDREKIRVSLGLKQLSDDP 266 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 3/69 (4%) Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSL--SNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 + G VTN+T++G FV+I +GLVH+S + +NK + P +V+ +VKV +L++D + Sbjct: 280 ITGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIH-PSKMVQVNSVVKVMILDIDEE 338 Query: 712 RKRIALTMR 720 R+RI+L ++ Sbjct: 339 RRRISLGLK 347 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 2/72 (2%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G + ++T+FG F+ + DGLVH+S +S N E+ K G+ V VL+VD R+R Sbjct: 369 GKIKSITDFGIFIGLEGSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVLQVDPDRER 428 Query: 715 IALTMR-LDEQP 725 I+L ++ L E P Sbjct: 429 ISLGIKQLQEDP 440 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +T+ L PG EG V +T+FG FV++G DGLVH S L+ P VVK GD V+ Sbjct: 240 QTIGKLVPGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFNHPRDVVKVGDKVQ 298 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGE 727 V+V++VD R+RI L+M+ L + P E Sbjct: 299 VQVIDVDEGRERINLSMKSLTQDPWE 324 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G VTN+TNFGAFV++ +GLVH+S +S K V P+ V+K GD V+ +L +D Sbjct: 333 GQRVRGKVTNLTNFGAFVELEPGLEGLVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRID 392 Query: 710 LQRKRIALTMR 720 + +RI+L +R Sbjct: 393 PKERRISLGIR 403 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 44/71 (61%) Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 PG ++G +T +T+FG F++I +GL+HIS L + V +P + K GD ++ +L +D Sbjct: 419 PGTPVKGKITGMTDFGVFMEIEEGIEGLIHISELDTQRVNNPADLFKKGDEIEAVILNID 478 Query: 710 LQRKRIALTMR 720 +R +L+ R Sbjct: 479 PVEQRASLSRR 489 >UniRef50_A0RK95 General stress protein 13 n=90 Tax=Bacillales RepID=A0RK95_BACAH Length = 119 Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 28/70 (40%), Positives = 50/70 (71%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G+++ G VT + ++GAFV + GLVHIS ++N +V+D H +K GD V+VKVL +D Sbjct: 13 GVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTVEVKVLSIDE 72 Query: 711 QRKRIALTMR 720 + ++++L+++ Sbjct: 73 EHRKMSLSLK 82 >UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Schizosaccharomyces pombe RepID=SPT6_SCHPO Length = 1365 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 152/703 (21%), Positives = 279/703 (39%), Gaps = 104/703 (14%) Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 D + +PE + YV + ++ + L AR +L E D RD L+ NA +V+ Sbjct: 484 DNTLSPEELSRTYVTNE--LSSPEQVLQKARRVLAEEIIHDPQFRKSFRDKLY-NAGVVT 540 Query: 193 TVVS-------GKEEEGAKFRDYFDHHEPLSTVPSH--RALAMFRGRNEGVLQLSLNADP 243 + + G E +F+ + +PL + L M + EG++QLS+ Sbjct: 541 VLATQKGVRKIGSEHPYYEFK--YLKRKPLGSFELEPILFLKMLKAEEEGLIQLSI---- 594 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH---------LETE 294 +F++P + + L L + +D++ + + W + ++++ Sbjct: 595 EFEDP------DDVFKGLLELFV----SDNFSENAMQWNAQRELVLKEVFKRFSALAPDA 644 Query: 295 LMGTVRERAEDEAINVFARN-LHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGK--- 350 + T+R R DE + + RN L L AP +T D G V +AV + G+ Sbjct: 645 IRETLRSRYLDE-LGMRCRNQLFSRLDQAPYE-PSTKNFDRGTIPSV-LAVSNGKGESSD 701 Query: 351 ---LVATDTIYPHTGQAAKAAM-------TVAALCEKHNVELVAIGNGTASRETERFYLD 400 V D + T A + A EK +++ + + S R Sbjct: 702 AIICVFVDDVGEPTDSLKLADLRDLANQAMFAEFVEKVKPDVIGVSGMSVSAHKIR---- 757 Query: 401 VQKQFPKVTAQK----VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE 456 Q +T+ + ++V++ A +Y S A EFP L V++AR +Q+PL E Sbjct: 758 -QHVQDSLTSHEPVDLIMVNDEVARLYQNSTRAVDEFPTLPTISCYCVALARYVQNPLFE 816 Query: 457 LVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRV 509 + D S+ +QH + L + L+ + D + VG+D+N A +L + Sbjct: 817 YAAMGRDLMSLSFDPWQHLLPPDVLWKYLETALVDISSLVGIDINEAVTNKYEANILPYI 876 Query: 510 AGLTRMMAQNIV-AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP----LD 564 AGL A ++ G+ NR L+ + K F C+ F I + + P LD Sbjct: 877 AGLGPRKADYVLKKIAATGGRIDNRSDLISKQIMSRKVFINCSSFFIIPNDEYPNMDILD 936 Query: 565 ASTVHPEAYPVVERILA-------------ATQQAL------KDLMGNSSELRNLKASDF 605 ++ +H E Y + ++ + T + + ++ G EL + +D Sbjct: 937 STRIHNEDYELARKMASDALELDEEDIEELETNRGVVYHLLEENETGKLDELVLEEYADQ 996 Query: 606 TDEKFGVP---TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGA 657 + +F T+ I EL+ P + R F ++ E +LQ I+ Sbjct: 997 LEREFHQKKRNTLEKIRLELKDPYGEQRNVFHKLTPSEIFLMLTGENPEELQADAIVPVN 1056 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V VTN V + DG + +S+ F+ P +++ G V+ ++ +D + L Sbjct: 1057 VRRVTNRFVAVKLDCGIDGNIKADEVSDDFIPPPQ-LLQVGQTVEGVIISLDEANFMVDL 1115 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 ++R + N++R + R A+ R E A A Sbjct: 1116 SLR-NSVLQSANSKRQTSSHRTSYWDTEAEKRDTERMQAETQA 1157 >UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=58 Tax=Bacteria RepID=A9KLR6_CLOPH Length = 643 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G ++EG V NVT+FGAF+D+G DGL+HIS +S +E P V K GD VK + Sbjct: 474 IKVGDVVEGTVKNVTDFGAFIDLG-GADGLLHISEMSWGRIESPKKVFKVGDTVKAFIK- 531 Query: 708 VDLQRKRIALTMRLDEQPGETNA 730 D+Q ++IAL+++ EQ NA Sbjct: 532 -DIQGEKIALSLKFPEQNPWANA 553 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 43/70 (61%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ G V +T FGAFV++ D L+H+S +S + +E P +K G V KV++ + Sbjct: 560 GNVVTGRVARMTEFGAFVELEPGVDALLHVSQISKEHIEKPADALKIGQEVTAKVVDFNN 619 Query: 711 QRKRIALTMR 720 K+I+L+++ Sbjct: 620 DEKKISLSIK 629 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 TM + G I++G V +T+FGAF+DIG DGL HIS +S+ ++ P + ++ G+ VKV Sbjct: 493 TMETITEGDIVDGTVKRLTDFGAFIDIG-GIDGLCHISQISHSRIDHPESELETGENVKV 551 Query: 704 KVLEVDLQRKRIALTMR 720 KVL +D + +RI+L+++ Sbjct: 552 KVLSLDPENERISLSIK 568 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 7/99 (7%) Query: 628 DPRPE-----FKTAQFADGVET-MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 DP E K AQ D ET M + G I++G V NFGAF++I +GL HIS Sbjct: 557 DPENERISLSIKEAQ-PDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVEGLCHIS 615 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 LS+ V VV GD V VK+L +D Q+K+++L+++ Sbjct: 616 QLSDDHVAKTQDVVNEGDQVTVKILSIDDQQKKVSLSIK 654 >UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobacteria RepID=RS1_RICBR Length = 572 Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 2/86 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E ++ ++ GMILEG V N+T++GAF+D+G DGL+H++ +S V P V++ VK Sbjct: 200 EMLSKIKEGMILEGTVKNITDYGAFIDLG-SVDGLLHLTDISWARVNHPSEVLEFNQKVK 258 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGE 727 V V++ + + KRI+L M+ LD P E Sbjct: 259 VMVIKFNEETKRISLGMKQLDYNPWE 284 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 1/75 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVD 709 G + G VTN ++G F+++ +GLVH S +S K ++P + G V+ VLEVD Sbjct: 293 GKKMTGKVTNFADYGVFIELKDGLEGLVHSSEISWLKSNQNPRKTLTIGQEVEFMVLEVD 352 Query: 710 LQRKRIALTMRLDEQ 724 ++ R++L+++ +Q Sbjct: 353 TEKHRVSLSIKQCQQ 367 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 2/91 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G +EG V+ +TNFG FVD+G +GLVHIS LS K ++DP VV GD +KV VL Sbjct: 117 ISKGDKIEGRVSRITNFGVFVDLG-GVEGLVHISELSWKKIKDPSEVVSVGDKLKVYVLN 175 Query: 708 VDLQRKRIALTM-RLDEQPGETNARRGGGNE 737 ++ R RI+L++ R P E ++ N+ Sbjct: 176 LNQDRNRISLSIKRTLNSPWENIGKKYKSND 206 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 47/68 (69%) Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I++G V+ V N GAF++I +GLVHIS +S + + P V++ GD VKVK+L +D + Sbjct: 207 IVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTPEEVLRVGDKVKVKILNIDEKA 266 Query: 713 KRIALTMR 720 RI+L+++ Sbjct: 267 SRISLSIK 274 >UniRef50_Q03SZ4 RNA binding protein (S1 domain) n=105 Tax=Firmicutes RepID=Q03SZ4_LACBA Length = 181 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G + G V+ +TNFGAFVD+G H+ GLVHIS +S+ +V+D H V+ GD V VKVL Sbjct: 3 IEVGAKVTGKVSGITNFGAFVDLGDHKTGLVHISEISDGYVKDIHDVLSVGDEVTVKVLT 62 Query: 708 VDLQRKRIALTMR 720 V +I L++R Sbjct: 63 VG-DDGKIGLSIR 74 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 7/134 (5%) Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DPRPEFKTAQFADGVETMN 646 L G+ E+R ++ D G P +IK +K G + + Q A ET+ Sbjct: 214 LPGSQLEIRPVRN---LDAYIGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKRSETLE 270 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 L+ G IL G V N+T++GAFVD+G DGL+HI+ +S + P +V GD ++VKVL Sbjct: 271 HLEEGSILTGTVKNLTDYGAFVDMG-GIDGLLHITDMSWGRLTHPRDLVNVGDEIQVKVL 329 Query: 707 EVDLQRKRIALTMR 720 + D ++R++L + Sbjct: 330 KFDRDKQRVSLGFK 343 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%) Query: 643 ETMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDI 700 ET+ D P G +EG V N+T+FGAF++I DGLVH+S+LS K V+ P V+K G+ Sbjct: 438 ETLGDKYPTGATVEGRVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGEK 497 Query: 701 VKVKVLEVDLQRKRIALTMR 720 V+ VL V+ + +R++L ++ Sbjct: 498 VRAVVLGVEPENRRLSLGIK 517 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 2/80 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V +VT++G+FV++ +GLVH+S ++ +K ++ P ++K GD V+ VL V+ Sbjct: 360 GARVRGRVLSVTDYGSFVELEQGIEGLVHVSEMTWSKRMKHPSKMLKPGDEVETVVLSVN 419 Query: 710 LQRKRIALTMR-LDEQPGET 728 +RI+L M+ L + P ET Sbjct: 420 PTDRRISLGMKQLQDNPWET 439 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 2/88 (2%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 VE ++ L+ G +LEG V N+T+FG F+D+G DGL+HI+ +S +E P V+ + + Sbjct: 247 VEIVSKLEKGQVLEGTVKNITDFGVFIDLG-GVDGLLHITDISWGRIEHPKEVLSLDEKI 305 Query: 702 KVKVLEVDLQRKRIALTMR-LDEQPGET 728 V VL+ D ++KRIAL ++ L P E+ Sbjct: 306 NVVVLDFDDEKKRIALGLKQLTPHPWES 333 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 2/74 (2%) Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V N+TNFG FV+I DGL+HIS LS +K V P+ K GD + V VLE+D+ +++ Sbjct: 434 VVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLELDVDNRKL 493 Query: 716 ALTMR-LDEQPGET 728 +L + L+E P +T Sbjct: 494 SLGHKQLEENPWDT 507 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 28/93 (30%), Positives = 58/93 (62%), Gaps = 3/93 (3%) Query: 643 ETMN-DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDI 700 E++N DL G ++G + V ++GAF++I +GL+H+S +S ++ + P +K GD Sbjct: 332 ESLNADLAIGSKVKGKIVTVADYGAFLEIIPGVEGLIHVSEMSWSQNLRSPQEFLKVGDE 391 Query: 701 VKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 ++ +VL +D + ++++L ++ L + P + A R Sbjct: 392 IEAEVLTLDREDRKMSLGIKQLTQDPWQNVAER 424 >UniRef50_Q1WSG8 S1-type RNA-binding domain n=18 Tax=Firmicutes RepID=Q1WSG8_LACS1 Length = 154 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 43/101 (42%), Positives = 61/101 (60%), Gaps = 2/101 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G L G V+ +T+FGAFVD+G + GLVHIS +SN FV+D H V+ GD V VKVL Sbjct: 3 IEVGAKLSGKVSGITDFGAFVDLGDKKTGLVHISEVSNTFVKDIHEVLSVGDEVTVKVLS 62 Query: 708 VDLQRKRIALTMRLD-EQPGETNARRGGGNERPQNNRPAAK 747 V +I L+++ ++P + N +R N NNR K Sbjct: 63 VS-DDGKIGLSIKKAVDKPQKQNNQRRNNNHEQHNNRDKVK 102 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 33/99 (33%), Positives = 59/99 (59%), Gaps = 12/99 (12%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 DP EF + G ++ G +T + +FGAF++I +GL+HIS LS++ Sbjct: 552 DPWEEFAKKHYE-----------GEVVSGTITKIVDFGAFMEIENGIEGLIHISQLSHRH 600 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQP 725 V+ P VV G+ +K +++ +D ++KR+ L+++ L+EQP Sbjct: 601 VKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQP 639 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/77 (41%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ +LQ G +++G VT + +FGAFVD+G +GL+HIS +S +E P V++ G ++V Sbjct: 472 TLEELQEGQVVKGKVTKIVDFGAFVDLG-GIEGLLHISEMSWGRIEHPSEVLEEGQEIEV 530 Query: 704 KVLEVDLQRKRIALTMR 720 KVL V+ + +RI+L ++ Sbjct: 531 KVLAVNKEEERISLGLK 547 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 45/74 (60%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL+ G ++G V + + G +VD+G +GL+ + LS++ EDPH +V+ G+ + V VL Sbjct: 302 DLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFEDPHEIVEEGEEIDVIVL 361 Query: 707 EVDLQRKRIALTMR 720 ++ + + L+ + Sbjct: 362 TLEDEEGNMVLSKK 375 >UniRef50_D1PLC1 RNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLC1_9FIRM Length = 154 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 5/119 (4%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 LQ G I+EG VT + FGAFV + + GLVHIS +S +FV+D V++ G V VKVL Sbjct: 3 LQVGDIVEGKVTGIKPFGAFVSLPEGKTGLVHISEVSYEFVQDLSAVLEDGQTVTVKVLS 62 Query: 708 VDLQRKRIALTMRLDEQPGETNAR-RGGGNERPQNNRPA--AKPRGREAQPAGNSAMMD 763 + K IAL+++ + E +R + GG RP +RP KPR + +PA M Sbjct: 63 IAPDGK-IALSIKRTQPAPERGSRSQQGGGARP-AHRPKREEKPRVWQPKPAAPQGEMS 119 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 53/76 (69%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +++++ G ++EG V + NFGAFVDIG DGLVHIS +S K + P V++ G V VK Sbjct: 244 LSEIKEGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQISYKHIATPQEVLEEGQKVTVK 302 Query: 705 VLEVDLQRKRIALTMR 720 V+ +D + +RI+L+++ Sbjct: 303 VIGIDPENERISLSIK 318 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E M L G ++EG V N+T +G FVD+G DGL+HI+ +S V P + GD V Sbjct: 202 ELMETLADGQVVEGIVKNITEYGVFVDLG-GIDGLLHITDISWGRVRHPSELFTVGDNVT 260 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +KVL DL +K+I+L M+ L P E+ A + Sbjct: 261 LKVLSFDLDKKKISLGMKQLTPDPWESAAEK 291 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G ++EG + N+T+FG F+ I DGLVHIS +S K ++ P + K GD+V+ VLE+D Sbjct: 382 GTVIEGRIKNITDFGLFIGIDDDIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEID 441 Query: 710 LQRKRIALTMR-LDEQPGET 728 +R ++ ++ L+ P E+ Sbjct: 442 KANERFSMGIKQLESDPWES 461 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 2/92 (2%) Query: 639 ADGVETMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 +D E++ D P G + G VTNVT+FG FV++ +GLVH+S +S + ++ P + Sbjct: 456 SDPWESVRDRYPIGTKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVSTERIKTPVGQYEV 515 Query: 698 GDIVKVKVLEVDLQRKRIALTM-RLDEQPGET 728 G + +V+ V+ ++I L++ RLD + +T Sbjct: 516 GAELTARVMNVNADERKIGLSIKRLDVEDDKT 547 Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G+ G V ++TN+G FV++ +GL+H+S +S + + P VV G+ V VL++ Sbjct: 295 GVKTTGKVVSITNYGIFVELEEGVEGLIHVSEISWTRKIRHPSKVVNIGEEVDAVVLDIQ 354 Query: 710 LQRKRIALTMR 720 +RI+L M+ Sbjct: 355 PGNRRISLGMK 365 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 50/74 (67%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D PG I++ V V +FGAFV+I +GLVH+S +S++ V+DP V+ G +KV++L Sbjct: 461 DFPPGKIVDAKVLKVLDFGAFVEIEKGIEGLVHVSEISDEHVDDPRKVLTPGQELKVQIL 520 Query: 707 EVDLQRKRIALTMR 720 VD Q ++I L+++ Sbjct: 521 SVDPQERKIGLSVK 534 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ L+ G +EG V N+T +GAF+D+G DGL+HI+ +S V P + + GD V+V Sbjct: 196 TLERLKEGQEVEGIVKNLTEYGAFIDLG-GIDGLLHITDMSWGRVNHPSELFQVGDHVRV 254 Query: 704 KVLEVDLQRKRIALTMR-LDEQP 725 KVL+ + +R++L ++ + E P Sbjct: 255 KVLKFNADTERVSLGLKQISEDP 277 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 4/75 (5%) Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEV 708 PG +++G V N+ +FG FV+I DGLVH+S +S + V+ P + + GD V+ +L + Sbjct: 374 PGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDEVEAVLLNI 433 Query: 709 DL---QRKRIALTMR 720 D ++ +I+L ++ Sbjct: 434 DTADGEKPKISLGIK 448 >UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assembly factor, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WJY9_CANDC Length = 1403 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 59/206 (28%), Positives = 94/206 (45%), Gaps = 21/206 (10%) Query: 397 FYLDVQKQFPKVTAQKVIV---SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 F + V+ F T+Q + V + A +Y S+ A +EFPD ++ AVS+ R LQ+P Sbjct: 793 FGISVKSDFEDGTSQLIKVVWGQDETARLYQNSDRAKKEFPDKPTLVKYAVSLGRYLQNP 852 Query: 454 LAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPL-----L 506 L E + + D S+ ++Q +S + +++ D VNAVGVD+N A L L Sbjct: 853 LLEYIALGDDILSLTFHEHQKLISNDLVKEVVESAFVDIVNAVGVDINEAVRDLRLAQTL 912 Query: 507 TRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP-- 562 V GL A ++ N NR L++ F CA L + G + Sbjct: 913 QYVGGLGPRKASGLLRNIGSNLGSVLVNRSALVEEELTTANIFINCASALNVVVGKSVNS 972 Query: 563 -------LDASTVHPEAYPVVERILA 581 LD++ +HPE Y + ++ A Sbjct: 973 KDFEVEILDSTRIHPEDYELARKMAA 998 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/91 (41%), Positives = 60/91 (65%), Gaps = 4/91 (4%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAG 698 D +ET +L PG + G + N+ +FGAFV+I DGL+H+S +S K + P+ +VK G Sbjct: 375 DSIET--ELPPGARVVGEIRNIASFGAFVEIKEGVDGLIHVSDMSWTKKITHPNEMVKKG 432 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 D V+ VL VD +++RI+L+M+ L E P ++ Sbjct: 433 DKVECVVLAVDKEKRRISLSMKHLTEDPWDS 463 Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 62/102 (60%), Gaps = 5/102 (4%) Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 E + Q D +ET L+ + +G V N+T+FGAF+D+G DGL+HI+ +S K + P Sbjct: 196 EERNKQRGDVLET---LEKNQVRKGIVKNITDFGAFIDLG-GVDGLLHITDMSYKRINHP 251 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +++ G V+V VL+ + +++RI+L M+ L P + A R Sbjct: 252 SEMLQLGQEVEVMVLDFNDKKERISLGMKQLKPHPWKDIAER 293 Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 52/80 (65%), Gaps = 2/80 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G I++G V ++T++GAFV++ +GL+H+S +S + V+ P ++ G V+ VL+V+ Sbjct: 297 GAIVKGKVVSITDYGAFVELDSGVEGLIHVSEMSWTQHVKHPSKILTVGQEVEAVVLKVE 356 Query: 710 LQRKRIALTMR-LDEQPGET 728 +RI+L M+ L+ P ++ Sbjct: 357 EDAERISLGMKQLESDPWDS 376 >UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Candida albicans RepID=SPT6_CANAL Length = 1401 Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 56/314 (17%) Query: 399 LDVQKQFPKVTAQKVIV---SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLA 455 + V+ +F ++Q V V + A +Y SE A +EFPD ++ A+S+ R LQDPL Sbjct: 793 ISVKSEFDDGSSQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYAISLGRYLQDPLL 852 Query: 456 ELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTR 508 E + + D S+ ++Q +S + +++ D VNAVGVD+N + L Sbjct: 853 EYITLGDDILSLTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDINESVRDSRLAQTLKY 912 Query: 509 VAGL--------TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI--NH 558 V GL R +AQ + R QL++ F C+ L+I N Sbjct: 913 VGGLGPRKASGMLRNIAQKL------GSVLTTRSQLIEYELTTRTIFINCSAALKISLNK 966 Query: 559 GDNP-------LDASTVHPEAYPVVERI------------LAATQQALKDLMGNS-SELR 598 N LD + +HPE Y + ++ L +K+L+ N S+L Sbjct: 967 SINVKDFEIEILDTTRIHPEDYQLAMKMAADALDMDEESELHEKGGVIKELLENDPSKLN 1026 Query: 599 NLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 L +DF ++ K ++ I EL + + R F+ D + +P M Sbjct: 1027 LLNLNDFANQIYKLTHKLKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFFILTGEKPQM 1086 Query: 653 ----ILEGAVTNVT 662 ++ +T VT Sbjct: 1087 LKNTVIPATITKVT 1100 >UniRef50_P73530 30S ribosomal protein S1 homolog A n=61 Tax=cellular organisms RepID=RS1A_SYNY3 Length = 328 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 32/83 (38%), Positives = 55/83 (66%), Gaps = 2/83 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 MN L+ ++ G+V + +GAF+DIG GL+HIS +S+ ++ PH+V D +KV Sbjct: 190 MNGLEVAQVVVGSVRGIKPYGAFIDIG-GVSGLLHISEISHDHIDTPHSVFNVNDEIKVM 248 Query: 705 VLEVDLQRKRIAL-TMRLDEQPG 726 ++++D +R RI+L T +L+ +PG Sbjct: 249 IIDLDAERGRISLSTKQLEPEPG 271 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/76 (38%), Positives = 50/76 (65%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + + +PG ++ G + NFGAFV++ + +GL HIS LS++ VE P VV+ G ++ K Sbjct: 136 LTEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEKPEDVVQLGQEMEFK 195 Query: 705 VLEVDLQRKRIALTMR 720 +L +D++ K+I L+ R Sbjct: 196 ILRIDVESKKIGLSAR 211 Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLE 707 Q G + G V N+T+FGAF++I DGLVH+S +S ++ ++ P V+K G + + Sbjct: 53 QVGTRVHGRVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITS 112 Query: 708 VDLQRKRIALTMR 720 +D + +R++L+++ Sbjct: 113 IDAENRRLSLSIK 125 >UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9S8_9ZZZZ Length = 379 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 49/75 (65%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ G VT + +FGAF + +GL+H+S LS++ + P VV+ GD + ++++ +DL Sbjct: 295 GQLVSGTVTKLADFGAFTRVEETVEGLIHVSELSDRHIRHPREVVQVGDSLTLRIVSLDL 354 Query: 711 QRKRIALTMRLDEQP 725 +R RI L++R E P Sbjct: 355 ERHRIGLSLRQVEDP 369 Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +LQ G + +G VT +++FGAFVDIG DGL+HIS LS V VV+ V+V Sbjct: 204 FGELQEGEVRKGVVTGISSFGAFVDIG-GADGLIHISELSWSPVSSVEEVVQVSQEVEVY 262 Query: 705 VLEVDLQRKRIALTMR 720 +L VD + +RIAL++R Sbjct: 263 ILRVDREHRRIALSLR 278 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 36/79 (45%), Positives = 49/79 (62%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 V+ N++ G V ++T FGAFV I DGLVHIS +SN+ V V+K GD V Sbjct: 551 VKLENEVPVGTEFTAPVVSITKFGAFVRIMPGIDGLVHISEISNERVNKVSDVLKVGDEV 610 Query: 702 KVKVLEVDLQRKRIALTMR 720 +VK+ VD RKRI+L+M+ Sbjct: 611 RVKLTNVDFDRKRISLSMK 629 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E +++ G +G V ++T++GAFVDIG DGL HIS LS ++ P VV GD ++ Sbjct: 467 EFWANVEVGKKYQGVVKSLTSYGAFVDIG-GVDGLCHISELSWSNIKHPSEVVNVGDEIE 525 Query: 703 VKVLEVDLQRKRIALTMRLDE 723 V V D + ++++L + +E Sbjct: 526 VYVKSYDPENQKVSLGYKKEE 546 >UniRef50_D1C7V0 RNA binding S1 domain protein n=2 Tax=Chloroflexi RepID=D1C7V0_SPHTD Length = 459 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + +L G G VT++T+FGAFVDIG DGLVH+S LS V+ P V+K G+ V V Sbjct: 222 IEELTEGETRRGRVTSITDFGAFVDIG-GADGLVHLSELSWSRVKHPSEVLKVGEEVDVY 280 Query: 705 VLEVDLQRKRIALTMR 720 VL ++ + K+IAL+++ Sbjct: 281 VLGINAEEKKIALSIK 296 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 43/70 (61%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ G VT + NFGAF I +GL+H+S LS + + P VV G + ++++ +D Sbjct: 313 GQLVLGTVTQLANFGAFARIEDGIEGLIHVSELSEQRIGHPRQVVSEGQDLILRIIRIDP 372 Query: 711 QRKRIALTMR 720 R+R+ L++R Sbjct: 373 ARRRMGLSLR 382 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 58/89 (65%), Gaps = 5/89 (5%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+ G VT + +FGAFV+I +GLVH+S +S+ V +V+KAG+ V+VKV+ +D Sbjct: 414 GAIINGKVTKIMDFGAFVEIAPGIEGLVHVSEVSHTRVSRIESVLKAGEKVEVKVVNIDK 473 Query: 711 QRKRIALTMR-LDEQPGETNARRGGGNER 738 +++RI L+++ L P A + GG ++ Sbjct: 474 EKRRIGLSIKALSPAP----ASKSGGKKK 498 Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 ETM LQ G + +G VT + +FGAFVDIG DGLVH+S +S V+ P + G V+ Sbjct: 321 ETMVTLQVGQMRDGTVTRLQDFGAFVDIG-GVDGLVHVSQISWDRVKHPSDALSEGQAVR 379 Query: 703 VKVLEVDLQRKRIALTMR 720 VKV ++D + +I L++R Sbjct: 380 VKVTKIDPETGKIGLSIR 397 >UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus RepID=RS1_STAAC Length = 391 Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L G +++G V +T FGAF+DIG DGLVH+S LS++ V+ P VV G VKVK Sbjct: 188 LQSLNEGDVIDGKVARLTQFGAFIDIG-GVDGLVHVSELSHEHVQTPEEVVSIGQDVKVK 246 Query: 705 VLEVDLQRKRIALTMR 720 + +D +RI+L+++ Sbjct: 247 IKSIDRDTERISLSIK 262 Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 46/68 (67%) Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 ++EG V + NFGAFV+I GLVHIS +++K + P V++ G V VK+L +D + Sbjct: 281 VIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVKILGIDEEN 340 Query: 713 KRIALTMR 720 +R++L+++ Sbjct: 341 ERVSLSIK 348 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVK 704 N G ++EG V ++TN+GAFV+I +GLVHIS +S + +E P +V G +V VK Sbjct: 444 NKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSWTRHIEHPSQMVSLGQVVDVK 503 Query: 705 VLEVDLQRKRIALTMR-LDEQPGETNARR 732 +L +D + ++I+L M+ L+ P E + R Sbjct: 504 ILNIDQEERKISLGMKQLEPDPWEGISDR 532 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L+ G +LEG V N+ +FG F+D+G DGL+HI+ LS V P VV+ ++ Sbjct: 356 EILEQLEVGQVLEGTVKNIVDFGVFIDLG-GVDGLLHITDLSWGRVSHPSEVVELDQELE 414 Query: 703 VKVLEVDLQRKRIALTMR 720 V VL+ + +R+RI+L ++ Sbjct: 415 VVVLDYEEERQRISLGLK 432 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%) Query: 640 DGVETMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKA 697 D E ++D P G +L G V N+TNFG FV+I DGLVH+S LS K + P +V Sbjct: 524 DPWEGISDRYPAGTVLTGTVRNITNFGVFVEIEPGIDGLVHVSDLSWTKKIRHPGDMVDE 583 Query: 698 GDIVKVKVLEVDLQRKRIAL 717 + V +L +D +R+RI+L Sbjct: 584 EQELDVVILNIDEERRRISL 603 >UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 Tax=Thalassiosira pseudonana RepID=B8C8T3_THAPS Length = 1304 Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 94/368 (25%), Positives = 151/368 (41%), Gaps = 70/368 (19%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 IV + A ++ S +EFPD V+L+ A++ AR ++PL EL + G + + Sbjct: 637 IVDDNVAQLFGRSVRGKKEFPDQPVNLKVAIATARWAKNPLCELAYTWSTASDAGVFGTE 696 Query: 474 V------------SQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMM 516 + + L R+ + V+ + VGVD+N A +L+ V GL Sbjct: 697 MLFMNIHPLQRLLPKPLLLRQYERVLCNVTAEVGVDINGACTYDHMHGMLSFVPGLGPRK 756 Query: 517 AQNI---VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-------NPLDAS 566 A N+ VA G +R+ LL LGP + FLR+ D +PLD + Sbjct: 757 ANNLKQSVA--RIGGVVSSRKSLLAKRLLGPIIYNNAIAFLRVRSTDQLQDQMLHPLDDT 814 Query: 567 TVHPEAY-----------PVVERILAATQ-------QALKDLMGNS-SELRNLKASDFTD 607 HP+ Y +E +A+ AL+D+M NS E+ L F + Sbjct: 815 RCHPDVYLRQKWAVKIAVDALELGDSASNDTDDYAISALRDVMQNSREEVEELDLDTFAE 874 Query: 608 --EKFG----VPTVTDIIKELEKPGRDPRPEF------KTAQFADGVETMNDLQPGMILE 655 E+ G + +T + E P DPR K + G ET L PG + Sbjct: 875 MIEQNGNGKWLSHLTMVKWEFRLPFEDPRKPMEPPTHEKLFKLLTG-ETDATLCPGKEVT 933 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 G V +FG+ V + G + + +L++ V G IV + EV + Sbjct: 934 GKVVKNGDFGSQVKLEGDVPGFIPLRNLADDHV---------GQIVNAIITEVKMDHMCC 984 Query: 716 ALTMRLDE 723 LT++L++ Sbjct: 985 DLTLKLED 992 >UniRef50_B4UDY4 RNA binding S1 domain protein n=4 Tax=Anaeromyxobacter RepID=B4UDY4_ANASK Length = 537 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 ET L PG + +G VT+V ++GAFVDIG +GLVH+S L+ V P ++ AGD V+ Sbjct: 318 ETRARLAPGAVFDGVVTSVQDYGAFVDIG-GVEGLVHVSELAWDRVSKPQDLLSAGDAVQ 376 Query: 703 VKVLEVDLQRK---RIALTMR 720 V+VL +D K RI L+++ Sbjct: 377 VQVLRIDEDPKKGERIGLSVK 397 >UniRef50_B4WRF0 S1 RNA binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WRF0_9SYNE Length = 304 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 2/84 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M+ L G ++EG + ++ FGAFVD G GL+HI +S ++ V K GD +K Sbjct: 194 MSSLTKGELIEGTIASLKPFGAFVDFG-GASGLLHIKQISKSYISALGDVFKVGDPIKAV 252 Query: 705 VLEVDLQRKRIAL-TMRLDEQPGE 727 VL +D QR RIAL T L++ PGE Sbjct: 253 VLNIDEQRGRIALSTQVLEKYPGE 276 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVL 706 L G ++EG VT++ FGAFV + +G+VH+ +S K + P VVK G +VK +VL Sbjct: 383 LAVGTVIEGPVTSIQKFGAFVQVAEGVEGMVHVGDISAEKRINHPQDVVKVGQVVKAQVL 442 Query: 707 EVDLQRKRIALTMR 720 E+D++++R+ L M+ Sbjct: 443 ELDVEKRRLRLGMK 456 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 D R + + A + + ++ G I+ G + ++T++GAFVDIG D L+H++ +S Sbjct: 191 DRRAVLEEEERASKEQRYSQVKEGEIVHGTIRSLTDYGAFVDIG-GVDALLHVADISWGR 249 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V P V+ GD V+ K+L+VD +KRI+L ++ Sbjct: 250 VNKPADVLNVGDKVEAKILKVDPAKKRISLGLK 282 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G+VT VT+FGAFV++ +GLVH+S +S +K + P +VK GD V+V VL V+ +R Sbjct: 304 GSVTRVTDFGAFVELEKGIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRR 363 Query: 715 IALTMR 720 I+L ++ Sbjct: 364 ISLGLK 369 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 ET+ Q G +++G V +T FGAFVDIG DGL+HIS +S + P V+K GD ++ Sbjct: 486 ETLETTQEGDVVKGVVRRLTQFGAFVDIG-GLDGLLHISEISWHRINHPSEVLKVGDELE 544 Query: 703 VKVLEVDLQRKRIALTMR 720 V+VL +D + ++++L+++ Sbjct: 545 VQVLRIDRENEKVSLSLK 562 Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/70 (41%), Positives = 42/70 (60%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ V + FGAFV++ +GLVHIS L++ V P V+ G + VKVL VD Sbjct: 579 GSVVSARVVRLVPFGAFVELEPGVEGLVHISHLADWHVAKPEDVIAEGQQINVKVLSVDD 638 Query: 711 QRKRIALTMR 720 + KRI L++R Sbjct: 639 ENKRIRLSLR 648 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 50/73 (68%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G LEG V N T FGAFV++ +GLVHIS +S++ V + V+K GD V VKVLE Sbjct: 290 IKAGDALEGVVRNTTAFGAFVEVLPDVEGLVHISQISHERVTNVEDVLKKGDKVNVKVLE 349 Query: 708 VDLQRKRIALTMR 720 D + +R++L+++ Sbjct: 350 FDFENERLSLSIK 362 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E ++ G ++EG V+ +T+FGAFV+IG DGL+HIS +S+ VE V+ GD +K Sbjct: 200 EVYGNINEGDVIEGKVSRITDFGAFVNIG-EVDGLLHISEISHARVEKVADVLSVGDTIK 258 Query: 703 VKVLEVDLQRKRIALTMR 720 V V+ VD + ++++L+ + Sbjct: 259 VAVIAVDKENEKVSLSAK 276 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%) Query: 633 FKTAQFADGVETMND-LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVED 690 K AQ AD E++ + +PG ++EG VT V FGAFV+I +GLVH+S +S K V Sbjct: 268 MKQAQ-ADPWESITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHVSEMSYLKRVSK 326 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 P V+ G V+VKV +D +RI+L+MR Sbjct: 327 PEEEVQPGQKVRVKVKGIDSLERRISLSMR 356 Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 7/114 (6%) Query: 614 TVTDIIKELEKPGRD---PRPEFKTAQFADGV-ETMNDLQPGMILEGAVTNVTNFGAFVD 669 ++T ++ +E GR+ R K + A+ + E + +PG +L+G VT V +G FV+ Sbjct: 156 SMTFLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKPGDVLQGTVTRVEPYGVFVE 215 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIALTMR 720 + +GLVHIS +S P +V GD V V +L ++ + K RI L+M+ Sbjct: 216 VAPGLEGLVHISEMSWSRSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMK 269 >UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Agaricales RepID=B0CSK5_LACBS Length = 1406 Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 58/191 (30%), Positives = 85/191 (44%), Gaps = 24/191 (12%) Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQ- 469 + V + A +Y S AA EF L + + V +AR Q PL E + D +I + + Sbjct: 813 IYVFDDVARIYQHSRRAADEFGALSPTAKYCVGLARYTQSPLNEFAALGSDITAITLSED 872 Query: 470 YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWR 524 QH V + +L + V+ D N GVD+N A LL V GL AQ ++ Sbjct: 873 DQHLVPKEKLLSAFERVLVDVTNKTGVDINRAVADAYYQNLLPFVCGLGPRKAQVLIKKI 932 Query: 525 DE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRI------------NHGD---NPLDASTV 568 G NR Q ++ L K F AGFLRI + G+ +PLD + + Sbjct: 933 GSLGGNLVNRDQFIEGGLLTTKIFLNAAGFLRIAQEHDPKPTKHRHDGETAPDPLDDTRI 992 Query: 569 HPEAYPVVERI 579 HPE Y + ++ Sbjct: 993 HPEDYELARKM 1003 >UniRef50_C9KMW6 RNA-binding protein n=3 Tax=Clostridiales RepID=C9KMW6_9FIRM Length = 152 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 4/92 (4%) Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 T +TNFGAFV++ + GL+HIS +++ +V+D H + D VKVKVL +D R +IAL+ Sbjct: 14 TGITNFGAFVELPEGKTGLIHISEVADVYVKDVHDFLSEKDKVKVKVLSID-DRGKIALS 72 Query: 719 MR-LDEQPGETNARRGGGNERPQNNRPAAKPR 749 ++ L E+ E A+ G + RPQ R + PR Sbjct: 73 IKQLQEKKPEAQAQTGNSSFRPQ--RQSRGPR 102 >UniRef50_C1N2E8 Elongation factor Ts n=2 Tax=cellular organisms RepID=C1N2E8_9CHLO Length = 844 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 61/107 (57%) Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 T + KE E+ + + K A + ++ + ++ G +EG V ++ FGAFV+I + Sbjct: 150 TILAKEAEREAKFQERKAKKAASEESMKAVRAIKKGTTVEGVVKSIQAFGAFVEIAEGVE 209 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 GLVH++ +S + P V G+ VKV+VL VD Q+ ++++ ++D Sbjct: 210 GLVHVTEMSEDYNVKPEDFVTVGETVKVRVLGVDGQKVKLSMKEKMD 256 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 644 TMNDLQP--GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 T+ D Q G +G V V +G FVD G DGLVHIS L + FVE+ VV V Sbjct: 62 TVTDEQVVVGAEFKGVVKRVQEYGCFVDFGAKSDGLVHISELKDGFVENVADVVSENQEV 121 Query: 702 KVKVLEVDLQRKRIALTMR 720 +V + +D ++ RI+LTM+ Sbjct: 122 QVFIKSIDAEKGRISLTMK 140 >UniRef50_C7H4V6 General stress protein 13 (Fragment) n=3 Tax=Faecalibacterium prausnitzii RepID=C7H4V6_9FIRM Length = 108 Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 3/96 (3%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G +LEG VT V FGAFV + + G+VHIS +SN++V+D +TV+ GD VKV+V+ + Sbjct: 6 GNVLEGRVTGVKPFGAFVALPEGKSGMVHISEVSNEYVQDINTVLHDGDAVKVQVINIAP 65 Query: 711 QRKRIALTMR--LDEQPGETNARRGGGNERPQNNRP 744 K IAL+++ L P + + RG P+ N P Sbjct: 66 DGK-IALSIKRLLSPAPRQPRSDRGPRPGGPRQNSP 100 >UniRef50_A6LQP2 RNA binding S1 domain protein n=7 Tax=Clostridium RepID=A6LQP2_CLOB8 Length = 384 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 3/83 (3%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D+ G I EG V +T FGAFV++ +GLVHI+ ++++ + P V++A VKVKVL Sbjct: 278 DINEGDIFEGKVIRLTTFGAFVELFDGIEGLVHITEITDEHIAKPSDVLEANQKVKVKVL 337 Query: 707 EVDLQRKRIALTMRLDEQPGETN 729 V+ + KRIAL+++ + ETN Sbjct: 338 SVNREEKRIALSIK---EAVETN 357 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++L+ G G V + FGAFVDIG +GL+H+S LS + V P +VK GD V+V + Sbjct: 192 DNLKEGEKRNGVVKKIVKFGAFVDIG-GVEGLIHLSDLSWERVNKPEDIVKEGDNVEVFI 250 Query: 706 LEVDLQRKRIALTMR 720 VD + +R++L ++ Sbjct: 251 GNVDRKNERLSLILK 265 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L G I+ G V+ + +FG FVD+G DGL+HIS LS V++P VV GD V+ Sbjct: 455 ELFSRLAEGQIVTGTVSRIADFGVFVDLG-GVDGLIHISDLSWHRVKNPTEVVNIGDEVQ 513 Query: 703 VKVLEVDLQRKRIALTMR 720 V V +VD + KRI+L+++ Sbjct: 514 VFVQKVDPKAKRISLSLK 531 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/85 (37%), Positives = 52/85 (61%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + L+ GM + G VT + FGAFV++ +GLVH+S L+++ V VV+ G V Sbjct: 540 DVVEGLREGMTVAGKVTKLAKFGAFVEVKPGVEGLVHLSELADRRVASAQEVVEVGQTVT 599 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGE 727 VK+L +D + KRI+L++ +Q E Sbjct: 600 VKILGIDKENKRISLSIAQAQQDAE 624 Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 35/62 (56%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M L+PG+IL+G V V FVDIG +G++ ++ L+ E+ VV GD + V Sbjct: 283 MKPLEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDVVSEGDEIDVY 342 Query: 705 VL 706 VL Sbjct: 343 VL 344 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + +L+ G +++G V N+T++GAFVD+G DGL+H++ ++ + V P V+ G VK Sbjct: 193 ELVQNLEEGQVIDGVVKNITDYGAFVDLG-GIDGLLHVTDIAWRRVNHPTEVLTIGQTVK 251 Query: 703 VKVLEVDLQRKRIALTMR 720 VK+++++ + RI+L M+ Sbjct: 252 VKIIKINHETHRISLGMK 269 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G VTN+T++GAFV++ +GL+H+S +S K P +V V+V+VLEVD ++R Sbjct: 291 GRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRR 350 Query: 715 IALTMR 720 I+L ++ Sbjct: 351 ISLGLK 356 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVD 709 G +EG V N T FG F+ + DG+VH+S L K E K GD+VK VL+VD Sbjct: 373 GSTVEGEVKNKTEFGLFLGLDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDVD 432 Query: 710 LQRKRIALTMR 720 ++++RI+L ++ Sbjct: 433 VEKERISLGVK 443 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V N+T+FGAFV+I DGL+HIS +S K V+ P VVK GD V V +L +D Sbjct: 403 GTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMSWTKRVQHPSEVVKKGDAVDVVILNID 462 Query: 710 LQRKRIALTMRLDEQ 724 + KRI+L ++ E+ Sbjct: 463 SENKRISLGLKQAEE 477 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 23/151 (15%) Query: 576 VERILAATQQALK------DLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDP 629 V+ L +Q AL+ +L+G E + +K + + +I E E+ G+ Sbjct: 166 VDAFLPGSQIALRRVPNIDELLGQKYEFKIIK---LNKRRRNIVVSRRVILETERAGKRE 222 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 + M +L + +G V N+T+FGAF+D+G DGL+HI+ +S + Sbjct: 223 K-------------LMKELAKDQVRKGVVKNITDFGAFIDLG-GVDGLLHITDMSWGRIS 268 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 P +V+ G +++KVL++D +R+RI+L ++ Sbjct: 269 HPSEMVQIGMELEIKVLDIDWERERISLGLK 299 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V ++TN+GAF+++ +GLVHIS +S + V P +V G+ ++ VL+VD Sbjct: 316 GTRVSGKVVSITNYGAFIELEPGIEGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVD 375 Query: 710 LQRKRIALTMRLDEQ 724 ++I+L M+ EQ Sbjct: 376 ETEEKISLGMKQTEQ 390 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 TM+ L+ G ILEG V N+T++GAF+D+G DGL+HI+ +S V +P + GD V V Sbjct: 209 TMDALKEGEILEGIVKNITDYGAFIDLG-GIDGLLHITDMSWGRVTNPQEFMNVGDKVNV 267 Query: 704 KVLEVDLQRKRIALTMR 720 VL+ D + R++L ++ Sbjct: 268 VVLKHDKETGRVSLGLK 284 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 2/81 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G ++ G + ++T+FGAFV + DGL+HIS +S K V P V K G V+V VL+++ Sbjct: 388 GAVVSGKIKSLTDFGAFVGLDEGIDGLIHISDMSWTKHVRHPSEVFKKGQKVEVVVLKIE 447 Query: 710 LQRKRIALTMR-LDEQPGETN 729 +R+R++L + + E P +++ Sbjct: 448 KERQRLSLGFKQVSEDPWDSD 468 Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 46/64 (71%), Gaps = 1/64 (1%) Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 V ++T++GAF++I +GL+H++ +S N V+ P ++ GD ++V+VL++D + ++I+ Sbjct: 308 VVSITDYGAFLEIEPGIEGLMHVTEMSWNHEVKHPSKIMSVGDTIEVQVLKIDEKNRKIS 367 Query: 717 LTMR 720 L ++ Sbjct: 368 LGLK 371 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 17/123 (13%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G L+G VT V +FG FV++ +GLVH+S + + + V + G + V+V+++D Sbjct: 476 GSFLDGVVTKVMDFGFFVELAEGIEGLVHVSEVDLESGQRLDQVYQPGMSLPVRVIKLDP 535 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMG 770 ++I L+M + + P PA AQPA +AM +AL +A Sbjct: 536 AERKIGLSM------------KAVSADSPLEAAPAVN-----AQPAPGNAMEEALKSARK 578 Query: 771 KKR 773 K + Sbjct: 579 KGK 581 >UniRef50_Q1D6H1 Ribosomal protein S1 family protein n=2 Tax=Cystobacterineae RepID=Q1D6H1_MYXXD Length = 548 Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/82 (40%), Positives = 53/82 (64%), Gaps = 1/82 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + +++++ G L+G V + FGAFV++ DGLVHIS+LS++ + P VVK G+ + Sbjct: 331 KALSEIKEGDRLQGKVVRLQQFGAFVELRPGVDGLVHISALSDRRIAHPRDVVKEGETIW 390 Query: 703 VKVLEVDLQRKRIALTMRLDEQ 724 V V ++D Q KRI L R+ E+ Sbjct: 391 VSVEKIDTQEKRIGLR-RISEE 411 Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 11/88 (12%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 ET +L G I++G VT V +FG FVD+G +G++ +S LS V P VVK GD V+ Sbjct: 236 ETRKNLAQGKIVKGKVTGVRDFGVFVDLG-GVEGMIPVSELSYTRVGHPSDVVKVGDDVE 294 Query: 703 VKVLEVDL----------QRKRIALTMR 720 V++L ++ Q++RI L+MR Sbjct: 295 VEILRMEAGQPNSPDKSKQKERITLSMR 322 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 35/73 (47%), Positives = 49/73 (67%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ GM + G V +TNFGAFVDIG DGLVHIS LS V++P VV D V+VKV++ Sbjct: 193 LEKGMQIRGEVKRLTNFGAFVDIG-GIDGLVHISELSWGRVKNPSEVVSVEDQVEVKVID 251 Query: 708 VDLQRKRIALTMR 720 D +++L+++ Sbjct: 252 FDETTGKVSLSIK 264 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/72 (43%), Positives = 45/72 (62%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G ILEG V + +FGAFV++ DGLVHIS +S + P + G V VKVL+ Sbjct: 278 FKAGDILEGKVVRLVDFGAFVELMPGLDGLVHISQISEAHIAKPSEELHVGQNVNVKVLD 337 Query: 708 VDLQRKRIALTM 719 +++ KRI+L+M Sbjct: 338 INIDGKRISLSM 349 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +N L+ G +EG V + FGAFVDIG DGLVH S LS V P VV GD V+V Sbjct: 192 LNSLEKGQKIEGVVRRLEKFGAFVDIG-GMDGLVHNSQLSWGRVNHPSEVVSIGDKVEVY 250 Query: 705 VLEVDLQRKRIALTMR 720 VL+ D K+IAL+++ Sbjct: 251 VLDFDKDTKKIALSLK 266 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 1/82 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++EG + + NFGAFV++ +GLVHIS ++++ + P + GD VKVKVLEV+ Sbjct: 283 GSVIEGTIVKLLNFGAFVEVENGIEGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNS 342 Query: 711 QRKRIALTMR-LDEQPGETNAR 731 KR++L+++ E+P E ++ Sbjct: 343 DEKRMSLSIKEATEKPKEDFSK 364 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 49/78 (62%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + ++QPG ++ G V + G FV+I +G +HIS LS + V+DP V GD + Sbjct: 443 EVVKNIQPGQLVRGKVVTIIPQGVFVEIADGVEGFIHISQLSIRRVDDPRDAVSEGDEIV 502 Query: 703 VKVLEVDLQRKRIALTMR 720 KV+ +D +R+RI+L+++ Sbjct: 503 AKVIGIDEERRRISLSVK 520 Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D G EG V N+T+FG FV++ +GLV +S K +D + VV GD V+V VL Sbjct: 361 DFPVGSKAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRFKDINEVVNIGDQVEVVVL 420 Query: 707 EVDLQRKRIALTMRLDEQP 725 +++ ++I L+MR D +P Sbjct: 421 GINIVDRKITLSMR-DTRP 438 Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 45/74 (60%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ I+ G V+ +T+ G FVD+G +G V L + +++ V + GD+V+ KVL Sbjct: 191 LKDSDIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRRGDVVRAKVLS 250 Query: 708 VDLQRKRIALTMRL 721 VD ++K + L++RL Sbjct: 251 VDEEKKEMVLSIRL 264 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + +++ GM+LEG V N+T+FG FVD+G DGLVHI+ ++ + P V D +K Sbjct: 212 EMLANIKVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWGRISHPSEAVNLDDPIK 270 Query: 703 VKVLEVDLQRKRIALTMR 720 V V+ D ++R++L M+ Sbjct: 271 VVVIGYDADKQRVSLGMK 288 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G V N+T+FG FV++ DGLVHIS LS K + P +VK + VKVL+ D++ +R Sbjct: 397 GIVRNITDFGVFVELESGVDGLVHISDLSWTKKIRHPSEIVKKNQELDVKVLKFDVKARR 456 Query: 715 IAL 717 IAL Sbjct: 457 IAL 459 Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V ++T++GAFV+I +GLVHIS +S + ++ P+ V G V+ +L +D Sbjct: 305 GTRVTGKVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPNQFVTMGQEVECVILNID 364 Query: 710 LQRKRIALTMRLDEQ 724 + +++L+M+ E+ Sbjct: 365 KEHTKLSLSMKQTEE 379 >UniRef50_A8MK30 RNA binding S1 domain protein n=32 Tax=Firmicutes RepID=A8MK30_ALKOO Length = 142 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 1/83 (1%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 Q G IL+G V+ +TNFGAF+D+G + GLVHIS +++ +V++ H +K VKVKVL + Sbjct: 4 QVGAILDGTVSGITNFGAFIDLGEGKTGLVHISEVADDYVKNIHDYLKTQQKVKVKVLSI 63 Query: 709 DLQRKRIALTMRLDEQPGETNAR 731 + +I+L+++ P + + Sbjct: 64 E-DNGKISLSIKQAALPKKKTVK 85 >UniRef50_A5VCY9 Polyribonucleotide nucleotidyltransferase n=438 Tax=cellular organisms RepID=PNP_SPHWW Length = 774 Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 2/78 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I G V N+ +FGAFV+ +DGLVH+S + N+ VE + G VKVKVLE+D Sbjct: 621 GKIYTGKVVNLVDFGAFVNFMGGKDGLVHVSEIKNERVEKVADALSEGQEVKVKVLEID- 679 Query: 711 QRKRIALTMR-LDEQPGE 727 R ++ L+MR +D++ GE Sbjct: 680 NRGKVRLSMRVVDQETGE 697 >UniRef50_A5D5X0 Predicted RNA binding protein n=5 Tax=Firmicutes RepID=A5D5X0_PELTS Length = 126 Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G +LEG VT +TNFGAF+++ + GLVHIS ++ +V+D H +K D V VKV+ Sbjct: 3 IEVGSVLEGVVTGITNFGAFIELPGGETGLVHISEIAEVYVKDVHDFLKTNDKVTVKVIS 62 Query: 708 VDLQRKRIALTMRLDEQPGETNARR 732 +D + +I L+++ P + +R Sbjct: 63 ID-PKGKIGLSIK-QVNPSRSQKKR 85 >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + +L G ++G V N+T +GAFVD+G DGL+HI+ ++ K V+ P +V GD V Sbjct: 184 QVLENLVEGSEVKGVVKNLTEYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEVT 242 Query: 703 VKVLEVDLQRKRIALTMR 720 VKVL+ D R R++L ++ Sbjct: 243 VKVLKFDKDRTRVSLGLK 260 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 32/69 (46%), Positives = 48/69 (69%), Gaps = 3/69 (4%) Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSL--SNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 L G VTN+T++G FV+I +GLVH+S + +NK + P VV GD V+V VLE+D + Sbjct: 280 LTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIH-PSKVVSLGDTVEVMVLEIDEE 338 Query: 712 RKRIALTMR 720 R+RI+L ++ Sbjct: 339 RRRISLGLK 347 Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 8/91 (8%) Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV-EDPHTVV 695 QFAD T N G + G + ++T+FG F+ + DGLVH+S +S E+ Sbjct: 356 QFAD---THN---KGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWSISGEEAVRQY 409 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR-LDEQP 725 K GD V VL VD ++RI+L ++ L+E P Sbjct: 410 KKGDEVSAVVLAVDAVKERISLGIKQLEEDP 440 >UniRef50_Q0D7X0 Os07g0203300 protein (Fragment) n=7 Tax=Magnoliophyta RepID=Q0D7X0_ORYSJ Length = 689 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 2/86 (2%) Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTV 694 +Q +D + + +DL G I+ G V V +FG FV I G L H+S LS++ V D H+ Sbjct: 223 SQKSDDI-SYSDLHVGDIIAGQVKRVESFGLFVTIQGSELVALCHVSELSDEPVLDIHSC 281 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMR 720 KAGD VK K+L++D +R R+++ M+ Sbjct: 282 HKAGDKVKAKILKIDEERHRVSIGMK 307 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 4/88 (4%) Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 +T++F E +NDL PG ++G V +V + G F+ + + + +S+LS+++VE+P Sbjct: 133 IRTSRF----EKINDLCPGTEVKGYVKSVNSKGCFIMVSRTIEARIILSNLSDEYVENPQ 188 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G +V +VL + Q ++ +++R Sbjct: 189 NDFPVGLLVHGRVLSSEPQSGKVEVSLR 216 >UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovibrio RepID=B8J034_DESDA Length = 489 Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVL 706 L+ G +++G V + FGAFV+I +GLVHIS LS K V P +++ GDIV VK+ Sbjct: 288 LENGAVVQGKVVRLAPFGAFVEILPGIEGLVHISELSWTKRVNKPEEILQVGDIVAVKIK 347 Query: 707 EVDLQRKRIALTMR 720 E++ +RI+L++R Sbjct: 348 EINADSRRISLSLR 361 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L G +EG ++ FGAF+++ +G++H+S LS V P V GD V+ K Sbjct: 196 LEKLGVGDTVEGKISRFAPFGAFMELDTAVEGMIHLSELSWSRVGAPDEAVSLGDTVRAK 255 Query: 705 VLEV---DLQRKRIALTMRLDE 723 VL + D + RIAL+ + E Sbjct: 256 VLSISKSDKGQVRIALSRKQAE 277 >UniRef50_Q0TNG2 Ribosomal protein S1 family n=9 Tax=Clostridium perfringens RepID=Q0TNG2_CLOP1 Length = 378 Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G +G VT + FGAFVDIG +GLVH+S +S V P VV GD V+V V E Sbjct: 192 IKEGEKRKGKVTRLAKFGAFVDIG-GVEGLVHLSDMSWSRVHKPEEVVSVGDEVEVFVSE 250 Query: 708 VDLQRKRIALTMR-LDEQPGET 728 VD+ R+RIAL+++ + + P ET Sbjct: 251 VDMDRERIALSLKDVIKNPWET 272 Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 28/78 (35%), Positives = 52/78 (66%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 ET+ L+ G ++ G VTN GAFV++ +GLVHIS ++++ + P +++ G VK Sbjct: 271 ETLEGLKVGDVVSGKVTNFIKVGAFVEVLPGIEGLVHISEITDENIAKPSDILELGQEVK 330 Query: 703 VKVLEVDLQRKRIALTMR 720 VK+L +D + K+++L+++ Sbjct: 331 VKILNIDDENKKMSLSIK 348 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 2/101 (1%) Query: 622 LEKPGRDPRPEFKTAQF-ADGVETMND-LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 LE D R Q +D E++ND + G ++ G V + +FGAFV++ DGL+H Sbjct: 414 LEIKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIH 473 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 IS LS VE V+K GD + +V++VD +RI L+++ Sbjct: 474 ISQLSEDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIK 514 Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 28/76 (36%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + ++ G +EG V N+T+FGAFVD+ DGL+HI+ +S V P ++ G ++V Sbjct: 180 LETVKEGDKVEGIVKNITDFGAFVDLR-GMDGLLHITDMSWGRVNHPSEMLHIGQSLEVV 238 Query: 705 VLEVDLQRKRIALTMR 720 +LEVD +++R++L ++ Sbjct: 239 ILEVDREKERVSLGLK 254 Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G +++G V N+T +GAFV + DG++H+S +S + + P V+K GD V+ VLE+ Sbjct: 358 GTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIK 417 Query: 710 LQRKRIALTMR-LDEQPGET 728 + +R++L ++ L+ P E+ Sbjct: 418 KEDQRVSLGIKQLESDPWES 437 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 35/77 (45%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G ILEG+V N+T FG F+ I DGL+H+S +S K V P + K+GDIV KVL VD Sbjct: 380 GTILEGSVKNITEFGIFIGIEDGIDGLIHVSDISWTKKVRHPGEMFKSGDIVMAKVLTVD 439 Query: 710 LQRKRIALTMR-LDEQP 725 + ++ L ++ L E P Sbjct: 440 KENEKFTLGIKQLSEDP 456 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/70 (38%), Positives = 47/70 (67%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G +++G VTN+T+FG FV++ +GLVH+S +S K V+ P + K GD ++ KV+ V Sbjct: 467 GAMVKGTVTNITDFGLFVEVEEGIEGLVHVSEISRKKVKTPAEIYKEGDEIEAKVIHVSA 526 Query: 711 QRKRIALTMR 720 +R+ L+++ Sbjct: 527 DERRLGLSIK 536 Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 7/104 (6%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L+ G + G V N+T +G FVD+G DGL+HI+ +S K ++ P +V GD +++K Sbjct: 202 LKTLEEGQTVTGRVKNITEYGVFVDLG-GLDGLMHITDMSWKRIKHPKELVHLGDELELK 260 Query: 705 VLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAK 747 VL D +++++L M+ L P E A + P++ R + K Sbjct: 261 VLSFDQDKQKVSLGMKQLIADPWENIA-----GKYPEDTRMSGK 299 Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%) Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 + G VTN+ ++GAFV++ +GLVHIS +S + + P +V GD V+V VL VD + Sbjct: 296 MSGKVTNLVDYGAFVELEPGVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDK 355 Query: 713 KRIALTMR 720 KRI+L M+ Sbjct: 356 KRISLGMK 363 >UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ustilago maydis RepID=SPT6_USTMA Length = 1723 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 24/226 (10%) Query: 393 ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQD 452 + +R + D+++ + V + A +Y S AA+EFP+L R +++AR Q Sbjct: 929 DADRLHSDLERD--QAVIDVVTCHDDVARIYQHSSRAAEEFPELSELGRYCLALARYAQS 986 Query: 453 PLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVP-----L 505 P+ E + D ++ + Q + Q +L + + VN GV++N A + Sbjct: 987 PVNEFAALGSDLTAVILDPNQRLLPQDRLRLHFERCIGAVVNENGVEINQAMTSTYLQTM 1046 Query: 506 LTRVAGLTRMMAQ---NIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI------ 556 L VAGL A N ++ + E G NR L+ + L + F+ CA FLRI Sbjct: 1047 LPFVAGLGPRKAHALVNAISTKLE-GTLINRTLLISRNILTFQVFQNCASFLRIEQDMLL 1105 Query: 557 --NHGDNP--LDASTVHPEAYPVVERILA-ATQQALKDLMGNSSEL 597 + D P LD++ +HPE Y ++ A A + +DL G L Sbjct: 1106 EADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKHEEDLEGEHPSL 1151 >UniRef50_P24384 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 n=10 Tax=Saccharomycetaceae RepID=PRP22_YEAST Length = 1145 Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 10/105 (9%) Query: 636 AQFADGVETMNDLQPGMIL----EGAVTNVTNFGAFVDI-GVHQ---DGLVHISSLSNKF 687 A+ + V+ + L P +L EG V N+T FG FV I G DGLVHIS +S++ Sbjct: 159 AKIEEEVQKIESLDPSPVLHKVYEGKVRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQR 218 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 DPH VV+ G + V+V+++ +I+L+M+ +D+ GE R Sbjct: 219 TLDPHDVVRQGQHIFVEVIKIQ-NNGKISLSMKNIDQHSGEIRKR 262 >UniRef50_C5XCN3 Putative uncharacterized protein Sb02g006000 n=1 Tax=Sorghum bicolor RepID=C5XCN3_SORBI Length = 1862 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ-DGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + +DL G I++G V V +FG FV I + GL H+S LS++ V D ++ KAGD+VK Sbjct: 1395 SYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGDMVK 1454 Query: 703 VKVLEVDLQRKRIALTMR 720 K+L++D +R R++L M+ Sbjct: 1455 AKILKIDEKRHRVSLGMK 1472 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 44/79 (55%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +E + DL PG ++G V NV + G F+ I + + +S+LS+++VE+P G +V Sbjct: 1303 IEKIKDLLPGTEIKGYVKNVNSKGCFIMISRMVEARITLSNLSDEYVENPQKDFPVGMLV 1362 Query: 702 KVKVLEVDLQRKRIALTMR 720 +VL D R+ ++R Sbjct: 1363 HGRVLSTDPSSGRVEASLR 1381 >UniRef50_C7N5E6 Polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) n=2 Tax=Coriobacteriaceae RepID=C7N5E6_SLAHD Length = 743 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 28/127 (22%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G + EG V + FGAFV + +DGL+HIS ++N V V+ GD VKV+V+E+D Sbjct: 622 GEVYEGTVVGIQTFGAFVKLTPSKDGLLHISRMANGRVSKVEDVLNMGDTVKVQVIEIDP 681 Query: 711 QRKRIALTMRL-----------------------DEQPGETNARRGGGNERPQNNRPAAK 747 + +++L RL D +PG N R G +R +NR K Sbjct: 682 KSGKVSLD-RLEKPDAPEGSEPAHNGREERGNGRDRRPGRGN-RNNGNEDRGGDNR---K 736 Query: 748 PRGREAQ 754 PR R Q Sbjct: 737 PRRRHQQ 743 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 15/101 (14%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G + G VT T+FGAF+++ +GL+HIS L ++ V+ V+ G KVLEVD Sbjct: 452 GSTISGKVTRTTDFGAFIELEPGLEGLIHISELDHRRVKRVTEVLTTGQETSAKVLEVDP 511 Query: 711 QRKRIALTMR------------LDEQPGETNARRG---GGN 736 RKRI+L+++ +++QP R+G GGN Sbjct: 512 NRKRISLSIKALIDKPEAAEAPVEDQPSYERKRKGPLLGGN 552 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 G V N+ ++GAFVD+G DG +HI +S ++ P + + VK+L++D ++ RI Sbjct: 372 GTVKNIKDYGAFVDLG-GIDGFLHIGEISWNRIKHPKDALSEHQQINVKILKIDKEKNRI 430 Query: 716 ALTMR 720 +L M+ Sbjct: 431 SLGMK 435 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 50/79 (63%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 ++ + Q G ++ G +T + +FGAF + +GL+H+S L+ VE P+ V++ GD V Sbjct: 301 MQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHVSELAGWRVEHPNEVLQEGDDV 360 Query: 702 KVKVLEVDLQRKRIALTMR 720 V+V+ +D R+RI L++R Sbjct: 361 IVRVIRIDPARRRIGLSLR 379 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + L+ G G VT++ +FG FVDIG DGLVH+S +S V+ P V++ GD V Sbjct: 217 QLIETLREGETRRGRVTSIADFGVFVDIG-GADGLVHLSEISWTRVKHPSEVLRVGDEVD 275 Query: 703 VKVLEVDLQRKRIALTMR 720 V VL V+ ++++IAL++R Sbjct: 276 VMVLSVNPEQRKIALSIR 293 >UniRef50_B8BUB4 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BUB4_THAPS Length = 348 Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +N + G LEG V +V ++G FVD+G + L+HIS ++ +E+ + GD V V Sbjct: 216 LNKFKVGDTLEGKVDSVVSYGVFVDVGASTNALLHISRITGSAIENIRHHLNEGDPVSVH 275 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARR 732 V+++D++RK +A++M LD++ + RR Sbjct: 276 VIDIDVERKTMAVSM-LDKKADQYLDRR 302 Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 1/77 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK-V 703 + DL+ G + G V +V +FGAF++IG GL+HIS + + V + + V K GD V+ Sbjct: 131 LKDLKLGSKVSGTVVDVCDFGAFINIGYASRGLLHISQIQDTRVANINNVFKVGDTVEGA 190 Query: 704 KVLEVDLQRKRIALTMR 720 +V+ VDL + + L++R Sbjct: 191 RVINVDLAKGEVGLSLR 207 >UniRef50_C9LM60 S1 RNA-binding domain protein n=1 Tax=Dialister invisus DSM 15470 RepID=C9LM60_9FIRM Length = 174 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ G I+EG VT + FG FV+I + GLVHIS ++ ++V D + +K D VKVK++ Sbjct: 3 LEVGSIVEGTVTGLAKFGVFVEIADKKIGLVHISEVAGEYVSDVNDYLKLHDKVKVKIIS 62 Query: 708 VDLQRKRIALTMR 720 VD ++ +IAL+++ Sbjct: 63 VD-EKGKIALSIK 74 >UniRef50_Q6BJC7 DEHA2G03410p n=4 Tax=Saccharomycetales RepID=Q6BJC7_DEBHA Length = 1716 Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 2/76 (2%) Query: 647 DLQPGMILEGAVTNVTNFGAFV--DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 DL+ G I EG+V VT+FGAF+ D V+ GL H S +S+ VE+ ++ GD VKVK Sbjct: 1242 DLEVGEIFEGSVRRVTDFGAFIKLDGTVNISGLCHHSQISDNDVENVSSLFGEGDRVKVK 1301 Query: 705 VLEVDLQRKRIALTMR 720 +L +D ++K+++L M+ Sbjct: 1302 ILAIDQEKKQLSLGMK 1317 >UniRef50_A4ISC1 Polyribonucleotide nucleotidyltransferase, general stress protein 13 n=5 Tax=Geobacillus RepID=A4ISC1_GEOTN Length = 124 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G I++G VT + +GAFV + GL+HIS +S++FV++ V GD V VKVL+ Sbjct: 7 MKRGAIVKGKVTGIQPYGAFVQLEGGMQGLIHISEISHRFVKNVRDYVHVGDEVTVKVLD 66 Query: 708 VDLQRKRIALTMRLDEQPGETNARR 732 VD + R +L+++ E PG +R Sbjct: 67 VDYKAGRASLSLKALE-PGREKQKR 90 >UniRef50_Q6MNP5 30S ribosomal protein S1 n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MNP5_BDEBA Length = 398 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 49/81 (60%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 QPG +LEG + + FGAFV++ +GL+H+S LS V DP VV AG V VK++++ Sbjct: 204 QPGALLEGKIVRLEKFGAFVELEAGIEGLIHVSELSWSRVHDPKEVVMAGQPVTVKLIKM 263 Query: 709 DLQRKRIALTMRLDEQPGETN 729 + R+ +++ L + G N Sbjct: 264 EEVDGRLKISLSLKQADGAGN 284 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/85 (40%), Positives = 52/85 (61%), Gaps = 2/85 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++ ++ GM+LEG V N+T+FG FVD+G DGLVHI+ ++ + P VV +KV Sbjct: 222 LDSIKVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWGRINHPSEVVDLDQPIKVV 280 Query: 705 VLEVDLQRKRIALTMR-LDEQPGET 728 V+ D KR++L M+ L+ P E Sbjct: 281 VVGFDENTKRVSLGMKQLEAHPWEN 305 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/64 (46%), Positives = 43/64 (67%), Gaps = 1/64 (1%) Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 +G V+N+T+FG FV++ DGLVHIS LS K + P +VK ++VKVL+ D+ + Sbjct: 404 KGTVSNITDFGVFVELEPGVDGLVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDVHAR 463 Query: 714 RIAL 717 RIAL Sbjct: 464 RIAL 467 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 2/73 (2%) Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 +G V ++T++GAFV+I +GLVHIS +S + ++ P V G V+ +L +D Sbjct: 317 QGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHT 376 Query: 714 RIALTM-RLDEQP 725 +++L+M R++E P Sbjct: 377 KLSLSMKRVNEDP 389 >UniRef50_A8RD50 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RD50_9FIRM Length = 114 Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/82 (36%), Positives = 49/82 (59%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++EG +T + +GAFV + +GL+HIS +S +FV D HT VK + VKVK+L++D Sbjct: 3 GEVVEGVITGIQPYGAFVYLDSKHNGLIHISEISERFVRDVHTYVKINERVKVKILDIDE 62 Query: 711 QRKRIALTMRLDEQPGETNARR 732 L+++ E + R+ Sbjct: 63 DGIHFKLSLKAVEANKARSLRK 84 >UniRef50_P80870 General stress protein 13 n=12 Tax=Bacillales RepID=GS13_BACSU Length = 130 Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/103 (33%), Positives = 58/103 (56%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G + G VT + +GAFV + GLVHIS +++ FV+D + + GD V+VKVL Sbjct: 5 FEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLA 64 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 VD ++ +I+L++R + E + + Q + A+ P+G Sbjct: 65 VDEEKGKISLSIRATQAAPEKKESKPRKPKAAQVSEEASTPQG 107 >UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Selenomonas RepID=C4V2L6_9FIRM Length = 370 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 47/78 (60%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +E G +EG + +T+FGAF++I DGL+ + L+ K +E V GDIV Sbjct: 265 IEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFDGLIPMGELAEKRIERADEAVHTGDIV 324 Query: 702 KVKVLEVDLQRKRIALTM 719 VKVL +D +RKRI+L++ Sbjct: 325 IVKVLRIDTKRKRISLSI 342 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++P I+ G V + ++GAF+DIG DGL HIS L+ V+ P V++ G + V V Sbjct: 186 IEPEQIVRGTVKRLVDYGAFIDIG-GVDGLAHISDLAWHRVKHPSEVLEVGQELDVYVKS 244 Query: 708 VDLQRKRIALTMR 720 VD KRI+L+++ Sbjct: 245 VDRDTKRISLSVK 257 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 36/88 (40%), Positives = 50/88 (56%) Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 K AQ V + G +G VTN+ +FGAFV+I +GL+HI LS V+ P Sbjct: 278 LKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHIGDLSWSRVKHPK 337 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V+K G V+V +LEVD R+RI L ++ Sbjct: 338 EVLKKGQEVEVVILEVDGDRRRIGLGLK 365 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/78 (39%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E ++ G ILEG V+++T+FG FV++G +GLVHI+ LS + +V+ GD VK Sbjct: 203 EFYANVHEGDILEGEVSSITSFGVFVNLGA-MEGLVHITELSWQRGAKAKDLVQKGDKVK 261 Query: 703 VKVLEVDLQRKRIALTMR 720 VKV+ +D + R++L+++ Sbjct: 262 VKVIGIDRENNRVSLSLK 279 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 31/68 (45%), Positives = 45/68 (66%) Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V + +FGAFV+I +GL+HIS LS + VE P V++ G V+ K+LEV+ KRI L Sbjct: 388 VVRLADFGAFVEIEDGVEGLIHISQLSRQRVEKPSDVLREGQEVQAKILEVNPSEKRIRL 447 Query: 718 TMRLDEQP 725 ++R E+P Sbjct: 448 SLRALEEP 455 >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +T+ L +L G V N+T++GAFVD+G DGL+HI+ +S + P +V+ GD ++ Sbjct: 236 KTLEHLNEDAVLTGTVKNLTDYGAFVDLG-GIDGLLHITDMSWGRLTHPRDLVQVGDQIQ 294 Query: 703 VKVLEVDLQRKRIALTMR 720 VKVL+ D ++R++L + Sbjct: 295 VKVLKFDRDKQRVSLGFK 312 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/80 (42%), Positives = 55/80 (68%), Gaps = 2/80 (2%) Query: 643 ETMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDI 700 E++++ P G ++EG V N+T+FGAF++I DGLVH+S+LS K V+ P V+K GD Sbjct: 407 ESLHEKFPVGGVVEGKVRNLTDFGAFIEIEDGIDGLVHVSNLSWTKRVKHPSEVLKKGDK 466 Query: 701 VKVKVLEVDLQRKRIALTMR 720 VK VL ++ +R++L ++ Sbjct: 467 VKAVVLAIEPDNRRLSLGVK 486 Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V +VT++GAF+++ +GLVH+S ++ +K ++ P +V GD V VL V+ Sbjct: 329 GARVHGRVISVTDYGAFIELEQGIEGLVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNVN 388 Query: 710 LQRKRIALTMR-LDEQPGET 728 Q +RI+L ++ L+ P E+ Sbjct: 389 PQERRISLGLKQLETNPWES 408 >UniRef50_D2MNP2 General stress protein 13 n=1 Tax=Bulleidia extructa W1219 RepID=D2MNP2_9FIRM Length = 123 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 27/70 (38%), Positives = 49/70 (70%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+EG VT + +GAFV I + GL+HIS +S+ FV++ H+ V+ G +V+VK++++D Sbjct: 6 GQIVEGKVTGLQPYGAFVAIDKNLSGLIHISEISDGFVKNIHSFVEVGQVVRVKIIDLDE 65 Query: 711 QRKRIALTMR 720 + + L+++ Sbjct: 66 KSNQAKLSLK 75 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 14/101 (13%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G ILEG V N+T FG F+ I DGL+H+S +S K V P+ + K GD V+ KVL VD Sbjct: 379 GTILEGVVKNITEFGMFIGIEDGIDGLIHVSDISWTKKVRHPNELFKVGDTVQAKVLTVD 438 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + ++ L ++ E P +N P+ P G Sbjct: 439 QENEKFTLGIK-------------QLTEDPWSNAPSVYPVG 466 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 25/70 (35%), Positives = 49/70 (70%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I++G +TN+T+FG FV++ +GLVH+S LS+K ++ P + K G+ ++ K++ V Sbjct: 466 GGIVKGIITNITDFGLFVEVEEGIEGLVHVSELSSKKIKSPSEIYKDGEEIQAKIIHVSA 525 Query: 711 QRKRIALTMR 720 + +R+ L+++ Sbjct: 526 EERRLGLSIK 535 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 47/76 (61%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + + G ++ G V NVT +G FVD+G DGL+HI+ +S K + P +V G +++K Sbjct: 201 LQTISEGQVVVGKVKNVTEYGVFVDLG-GLDGLLHITDMSWKRIRHPREMVNLGQELELK 259 Query: 705 VLEVDLQRKRIALTMR 720 VL D + ++++L ++ Sbjct: 260 VLSFDKENQKVSLGLK 275 Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G VTN+ ++G FV++ +GLVHIS +S + + P +V GD V+V +L +D +KR Sbjct: 297 GKVTNLVDYGVFVELESGVEGLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGIDQDKKR 356 Query: 715 IALTMR 720 I+L M+ Sbjct: 357 ISLGMK 362 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 644 TMNDL-QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +NDL + G +++G VT + FGAFV++ DGL+HIS LS VE V+ GD V+ Sbjct: 484 NINDLYKVGDVVKGKVTKIAAFGAFVELTNKIDGLIHISQLSRDRVEKVKDVLNVGDEVE 543 Query: 703 VKVLEVDLQRKRIALTMR 720 +V++VD +RI L+++ Sbjct: 544 ARVIKVDTDERRIGLSIK 561 Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 47/66 (71%), Gaps = 1/66 (1%) Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 +G V N+T+FGAF+D+G DGL+HI+ +S + P V+K G+ ++V ++ +D +++R Sbjct: 237 KGVVKNITDFGAFIDLG-GVDGLLHITDISWGRISHPSEVLKVGEEIEVVIIGIDKEKER 295 Query: 715 IALTMR 720 ++L ++ Sbjct: 296 VSLGLK 301 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 49/71 (69%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V N+T++GAFV+I DG++H+S +S + + +P+ V+K G V+ +L+++ Sbjct: 405 GRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIILDIN 464 Query: 710 LQRKRIALTMR 720 +++RI+L ++ Sbjct: 465 PEQQRISLGLK 475 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 48/84 (57%), Gaps = 2/84 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G V N+ +GAFV+I +GL+H+S +S K V V+ G+ V+ VL++D Sbjct: 318 GSKINGKVVNIMPYGAFVEIETGVEGLIHVSEMSWTKRVSKASDVLSIGEEVEAVVLDID 377 Query: 710 LQRKRIALTMRLDEQ-PGETNARR 732 ++I+L +R E+ P E A + Sbjct: 378 RDSRKISLGLRQKERNPWEVLAEK 401 >UniRef50_C9SZ75 rRNA biogenesis protein RRP5 n=5 Tax=Sordariomycetes RepID=C9SZ75_VERA1 Length = 1789 Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAF--VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 ++T D++P I+ G + V +FGAF VD + GL H S +++ VED + +AGD Sbjct: 1288 LKTYKDIKPNQIVTGKIRKVEDFGAFIVVDGSDNVSGLCHRSEMADSPVEDARKLYQAGD 1347 Query: 700 IVKVKVLEVDLQRKRIALTMR 720 +VK KVL +D +KRI+ ++ Sbjct: 1348 VVKAKVLTLDRNKKRISFGLK 1368 Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 39/77 (50%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T + ++P +L G V V V +G + G VH+ +S+ F + GD ++V Sbjct: 1107 TWDSIKPNQVLAGCVVKVNERQIMVKLGSNVAGHVHLVDMSDDFGDVNTLKYDEGDAIQV 1166 Query: 704 KVLEVDLQRKRIALTMR 720 V+EVD KR+ L+ R Sbjct: 1167 SVVEVDKSNKRVRLSTR 1183 Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust. Identities = 18/79 (22%), Positives = 46/79 (58%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +++ ++++ G G +++++ GA ++ G + +S +S F++DP K G +V Sbjct: 627 IKSFDEVEVGQQALGTISDISPHGARIEFYKGVRGWLPVSQMSEAFIQDPKEHFKVGQVV 686 Query: 702 KVKVLEVDLQRKRIALTMR 720 V +LEVD + +++ ++ + Sbjct: 687 NVHILEVDPENQKLLVSCK 705 >UniRef50_UPI0001B43B43 general stress protein 13 n=1 Tax=Listeria monocytogenes FSL F2-515 RepID=UPI0001B43B43 Length = 104 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 1/80 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M+ + G ++ G V + ++GAFV + GLVHIS +++ FV+D H ++ G VKVK Sbjct: 1 MSTFKVGDVVSGKVAGIQSYGAFVALDNSTQGLVHISEITHGFVKDIHDFLEVGQEVKVK 60 Query: 705 VLEVDLQRKRIALTMRLDEQ 724 +L++D +RK+I L++Q Sbjct: 61 ILDID-ERKKIKSVFLLEQQ 79 >UniRef50_B9MRX3 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MRX3_ANATD Length = 663 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/103 (32%), Positives = 61/103 (59%), Gaps = 1/103 (0%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ-DGL 677 I +++K + K Q + ++ + +L GM+++ VT V FG V I H DG Sbjct: 530 ILDIDKNKKQIYLSVKKTQDDEWIKKIKNLYLGMLVDCEVTKVLPFGLVVWITEHDVDGF 589 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VH+S++ + + PH + K GD ++ KV+E+D +++RIAL+++ Sbjct: 590 VHVSNIPLGYNQRPHNLYKVGDSLRAKVIEIDEEKRRIALSLK 632 >UniRef50_B7GEU7 Predicted RNA binding protein (Contains ribosomal protein S1 domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GEU7_ANOFW Length = 167 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 26/74 (35%), Positives = 48/74 (64%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D + G I+ G VT + +G FV + GL+HIS +++ +V++ + V G+ V+VK++ Sbjct: 55 DWKEGAIVTGVVTGIQPYGIFVSLDEQTQGLIHISEITDGYVKNIYDYVDVGESVRVKII 114 Query: 707 EVDLQRKRIALTMR 720 +D + KRI+L++R Sbjct: 115 AIDEKTKRISLSLR 128 >UniRef50_B8I046 RNA binding S1 domain protein n=13 Tax=Clostridia RepID=B8I046_CLOCE Length = 144 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ G I+EG VT +T FGAFV + + GLVHIS ++ ++V+D +K IVKVK+L Sbjct: 3 LEVGKIVEGKVTGITAFGAFVQLPEGKTGLVHISEVAQEYVKDVSAHLKENQIVKVKILS 62 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 VD K ++L+++ A GG P+ PA + N + D LA Sbjct: 63 VDTNGK-VSLSIK--------KAMAGGPTTVPKFRPPAEVDWNAGKNNSVNVSFEDRLAK 113 Query: 768 AM 769 M Sbjct: 114 FM 115 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 1/76 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L G +++G + N+T++GAF+D+G DGL+HI+ +S + + P V+ GD + VK Sbjct: 186 LASLGDGDVVQGVIKNITDYGAFIDLG-GLDGLLHITDISWRRIRHPSQVLSVGDRITVK 244 Query: 705 VLEVDLQRKRIALTMR 720 VL+ D + R++L ++ Sbjct: 245 VLKFDRTKTRVSLGLK 260 Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK---FVEDPHTVVKAGDIVKVKVLE 707 G + G VTN+ ++G FV+I +GL+H+S + K + H + G V V VL+ Sbjct: 277 GSRVRGRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRH--FRVGQYVNVTVLD 334 Query: 708 VDLQRKRIALTMR 720 V R+RI+L M+ Sbjct: 335 VSKTRRRISLGMK 347 >UniRef50_C3XIZ7 30s ribosomal protein s1 n=6 Tax=Campylobacterales RepID=C3XIZ7_9HELI Length = 562 Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 1/73 (1%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L G+ EG V NVT FG FV+IG DGLVH + +S++ +P K GD V+VK LE Sbjct: 200 LDSGLAYEGVVKNVTKFGLFVEIG-SVDGLVHFTEISHRGPVNPEKHYKVGDKVQVKPLE 258 Query: 708 VDLQRKRIALTMR 720 + ++ R++L++R Sbjct: 259 YNEEKNRLSLSIR 271 Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 57/85 (67%), Gaps = 2/85 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIV 701 E ++++ G ++ V+N+ ++GAFVD+G +G +HIS +S +K ++ P +K G+ + Sbjct: 280 EIKDEIKVGYVIRVTVSNIEDYGAFVDLGNDVEGFLHISEMSWDKNIKQPSDCLKVGEEI 339 Query: 702 KVKVLEVDLQRKRIALTM-RLDEQP 725 V+V+E+D +R+ +++ +L ++P Sbjct: 340 NVEVIEIDPDNRRLRVSLKKLQDKP 364 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 2/113 (1%) Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 E++ R R K Q V + + G +++G V +TNFGAFV++G DGL+H Sbjct: 345 EIDPDNRRLRVSLKKLQDKPFVRFTKEHKVGDVIKGKVATITNFGAFVNLGA-VDGLLHN 403 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 + K GD ++VK+ ++D ++I+L R L E P E A++ Sbjct: 404 EDAFWDKSKKCADEFKVGDSIEVKIDKIDTANEKISLNRRYLVESPSEQFAKK 456 >UniRef50_B9WAR4 rRNA biogenesis protein, putative n=5 Tax=Saccharomycetales RepID=B9WAR4_CANDC Length = 1715 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 52/81 (64%), Gaps = 2/81 (2%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFV--DIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 ++T +DLQ G I EG VT+ T FG FV D V+ GL H S +S V++ ++ GD Sbjct: 1230 MKTFDDLQIGDIFEGTVTSTTEFGVFVKLDGTVNVSGLCHHSEISENDVDNVKSLFGTGD 1289 Query: 700 IVKVKVLEVDLQRKRIALTMR 720 VKVK+L++D +++++L M+ Sbjct: 1290 RVKVKILKIDPVKRQLSLGMK 1310 >UniRef50_D1Z6Q4 Whole genome shotgun sequence assembly, scaffold_7 n=3 Tax=Sordariales RepID=D1Z6Q4_SORMA Length = 1776 Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 2/79 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD--GLVHISSLSNKFVEDPHTVVKAGDIV 701 T++DL+ G + G V V FGAF+DI + GL H S +S+K V+D + + GD V Sbjct: 1281 TISDLKEGQTITGRVRKVEEFGAFIDIDGSDNLSGLCHRSEMSDKAVKDARKLYEEGDKV 1340 Query: 702 KVKVLEVDLQRKRIALTMR 720 K KVL+VD KRI L ++ Sbjct: 1341 KAKVLKVDATAKRINLGLK 1359 >UniRef50_A2R624 Function: RRP5 is required for formation of both 18S and 5. 8S rRNA in yeast n=24 Tax=Leotiomyceta RepID=A2R624_ASPNC Length = 1822 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 2/79 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD--GLVHISSLSNKFVEDPHTVVKAGDIV 701 T++DL+PG ++ G V V FGAF+ I ++ GL H S ++ VED T+ + GD V Sbjct: 1321 TLHDLKPGQVVTGKVRKVEEFGAFIVIDGSKNISGLCHRSEMAENRVEDARTLYEEGDAV 1380 Query: 702 KVKVLEVDLQRKRIALTMR 720 K K+L++D ++++I+ ++ Sbjct: 1381 KAKILKIDRKQEKISFGLK 1399 >UniRef50_Q1WUT5 Polyribonucleotide nucleotidyltransferase n=17 Tax=Lactobacillales RepID=Q1WUT5_LACS1 Length = 136 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GMI+EG +T + +GAFV + GL+HIS + +V++ +K G +V+V ++++D Sbjct: 6 GMIIEGRITGIQPYGAFVSLDNRTQGLIHISECHHGYVDNIRNFLKVGQMVRVMIIDIDE 65 Query: 711 QRKRIALTMRLDEQPGE--TNARRGGGNER 738 +I+L++R E+ + RR G N R Sbjct: 66 YTGKISLSIRCLEKAFDFSREKRRPGFNHR 95 >UniRef50_C4R3F9 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both n=1 Tax=Pichia pastoris GS115 RepID=C4R3F9_PICPG Length = 1694 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 2/91 (2%) Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQ-DGLVHISSLSNKFVE 689 E + Q + +DL+ G + EG + + +FG F+ + GVH DGL H S +S+ +E Sbjct: 1219 ESQVGQGTGALHQFDDLKVGDVYEGTIKKIMDFGVFITLDGVHSVDGLCHRSQISDSKIE 1278 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 + ++ GD VKVK+L+++ +K+++L M+ Sbjct: 1279 NFESLFNQGDRVKVKILDINRNKKQLSLGMK 1309 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 48/67 (71%) Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 +EG + + +GAF+++ DGL+HIS +S+ VE+ ++V+ GD V+ K+LE+D R+ Sbjct: 584 VEGDIVQIKEYGAFLELEPGLDGLIHISEISHSRVENINSVLHIGDNVEAKILEIDKDRR 643 Query: 714 RIALTMR 720 RI+L+++ Sbjct: 644 RISLSIK 650 Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E L G +EG V T +GAFVDIG DGL+HIS +S ++ P V+ GD + Sbjct: 488 ELWKKLNVGDDIEGKVMRFTEYGAFVDIG-GVDGLLHISEISWGKLKHPSEVLTVGDTIN 546 Query: 703 VKVLEVDLQRKRIALTMR 720 VK+L ++ ++ +I+L + Sbjct: 547 VKILSLNPEKGKISLGYK 564 >UniRef50_D1A3N7 RNA binding S1 domain protein n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1A3N7_THECD Length = 162 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 2/84 (2%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +E + + GMI+ G V ++ FGAFVD+G +GL+ ++S + +E P V+ G V Sbjct: 4 LERLKSYRAGMIVTGRVRSLERFGAFVDLG-GVEGLLKTHNISWRPIEYPSDVLSVGKEV 62 Query: 702 KVKVLEVDLQRKRIALTMRLDEQP 725 VK+L+VDLQR +I+L+++ D QP Sbjct: 63 TVKILDVDLQRGQISLSLK-DLQP 85 >UniRef50_C0DB62 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB62_9CLOT Length = 259 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/101 (33%), Positives = 59/101 (58%), Gaps = 12/101 (11%) Query: 620 KELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 +E+EK ++ + K AQF + G ++EG V ++ N+GAF+ + DGL+H Sbjct: 135 REVEKERKEAERKEKLAQF----------KAGDVVEGTVDSLKNYGAFIKLADGVDGLLH 184 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +S +S + ++ P V+K G VKVK+L V +I+L+M+ Sbjct: 185 VSQISTQRIKHPGVVLKEGQSVKVKILSV--ADGKISLSMK 223 >UniRef50_C1NA95 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1NA95_9CHLO Length = 2229 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 44/79 (55%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +ET + L PG + G V T G FV +G D V + +LSN+FV+DP G +V Sbjct: 1527 IETCDQLTPGTKVAGFVKQCTKGGCFVALGRTVDARVKLCNLSNEFVDDPPKAFPKGALV 1586 Query: 702 KVKVLEVDLQRKRIALTMR 720 VL VD + +R+ +T+R Sbjct: 1587 TGTVLSVDAENERVEITLR 1605 >UniRef50_B8C1Y5 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8C1Y5_THAPS Length = 627 Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 6/99 (6%) Query: 631 PEFKTAQFAD-----GVETMNDLQPGMILEGAVTNVT-NFGAFVDIGVHQDGLVHISSLS 684 P KT + D G + + D G G V + + GAF+DIG H D HIS +S Sbjct: 393 PSKKTPKKDDPRRCIGRKPVTDYTVGTKYSGTVKYIKPHLGAFIDIGCHSDAFCHISCIS 452 Query: 685 NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +++ V+K D V +++E++ ++KRI +++R ++ Sbjct: 453 DEYASSVGDVLKVDDTVDARIIEINREKKRITVSLRSED 491 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ L G I++G V N+T +GAFVD+G DGL+H++ +S V P V+K G V V Sbjct: 200 TLEKLSEGQIMQGVVKNLTEYGAFVDLG-GVDGLLHVTDISWGRVGKPADVLKPGQEVNV 258 Query: 704 KVLEVDLQRKRIALTMR 720 K+L+ D ++ ++++ ++ Sbjct: 259 KILKFDREKGKVSVGIK 275 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVD 709 G LEG + N+T+FG F+ I DGLVH+S +S K V+ P V GD+V+ VL+VD Sbjct: 379 GTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDISWTKRVKHPGDVYSKGDLVQAVVLKVD 438 Query: 710 LQRKRIALTMR 720 Q +R++L ++ Sbjct: 439 PQNERVSLGIK 449 Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/71 (36%), Positives = 41/71 (57%) Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 PG L G V + T+FG FV+I +GL+H+S LS + V GD ++ VL D Sbjct: 465 PGTRLVGKVASTTDFGVFVEIEEGIEGLIHVSELSREKVPSAKDFAIVGDSIEAVVLNAD 524 Query: 710 LQRKRIALTMR 720 + +RI+L+++ Sbjct: 525 SRERRISLSVK 535 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=... 1103 0.0 UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE 876 0.0 UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actino... 858 0.0 UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular ... 856 0.0 UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Ta... 854 0.0 UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa ... 846 0.0 UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria ... 827 0.0 UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria R... 819 0.0 UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria ... 817 0.0 UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacter... 811 0.0 UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria ... 811 0.0 UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopi... 810 0.0 UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria ... 809 0.0 UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular ... 808 0.0 UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Ba... 807 0.0 UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21V... 802 0.0 UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 2... 800 0.0 UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychro... 795 0.0 UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomona... 791 0.0 UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Ba... 790 0.0 UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria ... 788 0.0 UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Ta... 787 0.0 UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria R... 784 0.0 UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2... 779 0.0 UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular ... 765 0.0 UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 759 0.0 UniRef50_A9NHV1 Tex protein-related transcription accessory prot... 759 0.0 UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria R... 759 0.0 UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaero... 757 0.0 UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacte... 752 0.0 UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellac... 751 0.0 UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular o... 741 0.0 UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia ... 739 0.0 UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacil... 735 0.0 UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobact... 732 0.0 UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacter... 732 0.0 UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitr... 727 0.0 UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococc... 722 0.0 UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridia... 721 0.0 UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding... 721 0.0 UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria... 714 0.0 UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycopla... 695 0.0 UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 ... 690 0.0 UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=de... 689 0.0 UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Myco... 689 0.0 UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia... 687 0.0 UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonpro... 681 0.0 UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding doma... 675 0.0 UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 674 0.0 UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding doma... 665 0.0 UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycopla... 659 0.0 UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=... 650 0.0 UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosiph... 646 0.0 UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosiph... 639 0.0 UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding doma... 637 0.0 UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding doma... 611 e-173 UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 ... 608 e-172 UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59... 603 e-171 UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 603 e-171 UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 602 e-170 UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichop... 578 e-163 UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing ... 540 e-152 UniRef50_Q4DZK1 Transcription modulator/accessory protein, putat... 535 e-150 UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS 529 e-148 UniRef50_Q4QH24 Transcription modulator/accessory protein, putat... 529 e-148 UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory prote... 520 e-146 UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun se... 497 e-139 UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorh... 481 e-134 UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7... 471 e-131 UniRef50_C5KAX6 Tex protein-relatedtranscription accessory prote... 454 e-126 UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larv... 449 e-124 UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root Re... 446 e-123 UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornu... 432 e-119 UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain pro... 421 e-116 UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula ... 420 e-116 UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putati... 408 e-112 UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria R... 408 e-112 UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchi... 401 e-110 UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=... 397 e-108 UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bi... 381 e-104 UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 ... 379 e-103 UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eu... 378 e-103 UniRef50_UPI000186D180 transcription elongation factor SPT6, put... 367 e-100 UniRef50_D1IGV1 Whole genome shotgun sequence of line PN40024, s... 365 4e-99 UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Ne... 363 1e-98 UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS 361 7e-98 UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O808... 361 8e-98 UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Sch... 351 7e-95 UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=... 347 1e-93 UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=So... 345 6e-93 UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5... 342 2e-92 UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Sch... 328 7e-88 UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leo... 326 3e-87 UniRef50_C5Z0A7 Putative uncharacterized protein Sb09g024270 n=1... 323 1e-86 UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis... 313 1e-83 UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditi... 311 9e-83 UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia mal... 310 1e-82 UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eu... 308 4e-82 UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 T... 308 5e-82 UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 308 6e-82 UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCM... 293 1e-77 UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichop... 291 6e-77 UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=... 291 9e-77 UniRef50_UPI00019085B8 probable transcriptional accessory protei... 290 2e-76 UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma m... 289 2e-76 UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersini... 283 2e-74 UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Aga... 278 5e-73 UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyr... 269 2e-70 UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureu... 269 3e-70 UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Fil... 266 3e-69 UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 T... 264 1e-68 UniRef50_UPI00017F7950 YALI0B01224p n=1 Tax=Yarrowia lipolytica ... 252 4e-65 UniRef50_A8PWC4 Putative uncharacterized protein n=1 Tax=Malasse... 243 2e-62 UniRef50_C4R7H2 Transcription elongation factor n=1 Tax=Pichia p... 242 5e-62 UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornu... 241 9e-62 UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ust... 241 9e-62 UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria R... 238 7e-61 UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Sa... 223 2e-56 UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Ta... 217 9e-55 UniRef50_Q55A48 SH2 domain-containing protein n=1 Tax=Dictyostel... 210 1e-52 UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopi... 208 8e-52 UniRef50_Q6BVE1 Transcription elongation factor SPT6 n=7 Tax=Sac... 205 7e-51 UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Can... 202 4e-50 UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assemb... 202 6e-50 UniRef50_A9V9Y8 Predicted protein n=2 Tax=Fungi/Metazoa group Re... 191 1e-46 UniRef50_A0DQ53 Chromosome undetermined scaffold_6, whole genome... 175 6e-42 UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial ... 160 1e-37 UniRef50_Q5BZL5 SJCHGC08220 protein (Fragment) n=1 Tax=Schistoso... 149 4e-34 UniRef50_A7AMH1 Putative uncharacterized protein n=1 Tax=Babesia... 139 3e-31 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 122 5e-26 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 118 6e-25 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 117 2e-24 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 116 3e-24 UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerof... 116 4e-24 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 116 4e-24 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 115 9e-24 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 114 1e-23 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 114 1e-23 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 114 1e-23 UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 114 2e-23 UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnop... 113 3e-23 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 113 3e-23 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 112 4e-23 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 112 5e-23 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 112 6e-23 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 112 8e-23 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 112 8e-23 UniRef50_B1YKU0 RNA binding S1 domain protein n=3 Tax=Bacillales... 111 9e-23 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 111 1e-22 UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL 111 1e-22 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 110 2e-22 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 110 2e-22 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 110 2e-22 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 110 2e-22 UniRef50_D1PLC1 RNA-binding protein n=1 Tax=Subdoligranulum vari... 110 3e-22 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 110 3e-22 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 110 3e-22 UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobacu... 109 3e-22 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 109 4e-22 UniRef50_Q0WVD2 Elongation factor Ts (Fragment) n=5 Tax=cellular... 109 4e-22 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 109 5e-22 UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio ... 109 5e-22 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 108 6e-22 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 108 6e-22 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 108 7e-22 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 108 7e-22 UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflex... 108 8e-22 UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflex... 108 8e-22 UniRef50_UPI000190EA94 putative transcription accessory protein ... 108 8e-22 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 108 8e-22 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 108 9e-22 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 108 9e-22 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 108 9e-22 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 108 1e-21 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 108 1e-21 UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter ... 107 1e-21 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 107 1e-21 UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8... 107 1e-21 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 107 1e-21 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 107 2e-21 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 107 2e-21 UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosip... 107 2e-21 UniRef50_UPI0001910907 putative transcription accessory protein ... 107 2e-21 UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococ... 106 2e-21 UniRef50_B8I046 RNA binding S1 domain protein n=13 Tax=Clostridi... 106 3e-21 UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovib... 106 3e-21 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 106 3e-21 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 106 3e-21 UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula ... 106 4e-21 UniRef50_P80870 General stress protein 13 n=12 Tax=Bacillales Re... 106 4e-21 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 106 4e-21 UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=can... 105 5e-21 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 105 5e-21 UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2... 105 5e-21 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 105 6e-21 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 105 7e-21 UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovi... 105 7e-21 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 105 8e-21 UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 105 8e-21 UniRef50_Q03SZ4 RNA binding protein (S1 domain) n=105 Tax=Firmic... 105 9e-21 UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovib... 105 9e-21 UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula ... 105 9e-21 UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteri... 105 9e-21 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 104 1e-20 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 104 1e-20 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 104 1e-20 UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovib... 104 1e-20 UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 104 2e-20 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 104 2e-20 UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 104 2e-20 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 104 2e-20 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 103 2e-20 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 103 2e-20 UniRef50_A9SG12 Predicted protein n=1 Tax=Physcomitrella patens ... 103 3e-20 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 103 3e-20 UniRef50_UPI00016BFB5D hypothetical protein Epulo_08978 n=1 Tax=... 103 3e-20 UniRef50_C7H4V6 General stress protein 13 (Fragment) n=3 Tax=Fae... 103 3e-20 UniRef50_Q1WUT5 Polyribonucleotide nucleotidyltransferase n=17 T... 103 4e-20 UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovib... 103 4e-20 UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=5... 103 4e-20 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 103 4e-20 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 102 4e-20 UniRef50_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudona... 102 4e-20 UniRef50_A0RK95 General stress protein 13 n=90 Tax=Bacillales Re... 102 4e-20 UniRef50_A7GUA8 RNA binding S1 domain protein n=7 Tax=Bacillales... 102 4e-20 UniRef50_B7GEU7 Predicted RNA binding protein (Contains ribosoma... 102 5e-20 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 102 5e-20 UniRef50_Q0B0Q8 RNA binding S1 n=2 Tax=Firmicutes RepID=Q0B0Q8_S... 102 5e-20 UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=u... 102 5e-20 UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotoga... 102 5e-20 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 102 5e-20 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 102 5e-20 UniRef50_A4ISC1 Polyribonucleotide nucleotidyltransferase, gener... 102 5e-20 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 102 6e-20 UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga ... 101 7e-20 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 101 8e-20 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 101 8e-20 Sequences not found previously or not previously below threshold: UniRef50_Q4RRW0 Chromosome 7 SCAF15001, whole genome shotgun seq... 281 8e-74 UniRef50_UPI00019240C9 PREDICTED: similar to Suppressor of Ty 6 ... 226 3e-57 UniRef50_A4S671 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 222 3e-56 UniRef50_C1E5G2 Transcription elongation-nucleosome displacement... 203 2e-50 UniRef50_Q22BP0 Zinc knuckle family protein n=1 Tax=Tetrahymena ... 158 9e-37 UniRef50_A8J804 Glycine rich protein n=1 Tax=Chlamydomonas reinh... 145 7e-33 UniRef50_B0EV07 Transcription elongation factor spt6, putative n... 144 2e-32 UniRef50_Q7JQ89 CnjB protein n=3 Tax=Tetrahymena thermophila Rep... 121 1e-25 UniRef50_B9QA08 Suppressor of ty, putative n=3 Tax=Toxoplasma go... 108 1e-21 UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 106 3e-21 UniRef50_A2EUK7 SH2 domain containing protein n=1 Tax=Trichomona... 103 2e-20 UniRef50_A4I9F1 Putative uncharacterized protein n=2 Tax=Leishma... 103 2e-20 UniRef50_Q5BXL3 SJCHGC08355 protein (Fragment) n=1 Tax=Schistoso... 101 8e-20 >UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=YHGF_ECOLI Length = 773 Score = 1103 bits (2852), Expect = 0.0, Method: Composition-based stats. Identities = 773/773 (100%), Positives = 773/773 (100%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL Sbjct: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE Sbjct: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV Sbjct: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN Sbjct: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR Sbjct: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH Sbjct: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 Query: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA Sbjct: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA Sbjct: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS Sbjct: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL Sbjct: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN Sbjct: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR Sbjct: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR Sbjct: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 >UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE Length = 791 Score = 876 bits (2263), Expect = 0.0, Method: Composition-based stats. Identities = 463/771 (60%), Positives = 554/771 (71%), Gaps = 8/771 (1%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 +A EI AR QV +AV LLD+G TVPFIARYRKE TGGLDD LR LE RL YLR Sbjct: 18 RIIAQLATEIGARASQVASAVELLDDGATVPFIARYRKEATGGLDDGALRTLEVRLGYLR 77 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ELEERR AIL+SI++QGKLT +L + I +K LEDLY PYKPKRRTR QIA EAGLE Sbjct: 78 ELEERRGAILESITQQGKLTPELQQEIATAETKQRLEDLYAPYKPKRRTRAQIAREAGLE 137 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 PLAD + +DP+ P AAQY+ + + D KAALDGAR IL ER AE+A LLA +R++L Sbjct: 138 PLADAILADPACDPAALAAQYLNPEASINDAKAALDGARDILAERHAENADLLADIREHL 197 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL----N 240 W L S +V GKE +GA FRD+FD +EPL T+PSHR LA+ RGR +GVL+L + + Sbjct: 198 WSTGLLYSKMVEGKETDGANFRDWFDFNEPLRTLPSHRILALMRGRQQGVLELRVGLEAD 257 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 + + P + + + L+ P W V WTWR+K+L E+EL G +R Sbjct: 258 LEAETPHPCVVRIASFLKLGNGLFALDATPRARWLGEVCRWTWRVKLLTAFESELFGRLR 317 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 E AE EAI VFA NL DLL+AAPAG + +GLDPG+RTG KVAV+D TGK+V T T+YP Sbjct: 318 ESAEAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKVAVIDRTGKVVDTATVYPF 377 Query: 361 TGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 + + T+AAL +H VEL+AIGNGTASRE+E+ D+ +FP + +V+VSEA Sbjct: 378 EPRRDREGTIKTLAALAARHKVELIAIGNGTASRESEKLVGDMMARFPDLALTRVVVSEA 437 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSASE AA EFPDLDV+LRGAVSIARRLQDPLAELVKIDPK+IGVGQYQHDV+Q + Sbjct: 438 GASVYSASETAALEFPDLDVTLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQRE 497 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 LAR LDAVVEDCVNAVGVD+NTAS LL RV+GL ++A+NIVAWRDENG F R L K Sbjct: 498 LARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNTLLAKNIVAWRDENGAFPTRDMLRK 557 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V R G KAFEQ AGFLRI +GDNPLDAS VHPEAYPVVERI+A + ++ ++G L+ Sbjct: 558 VPRFGEKAFEQAAGFLRIPNGDNPLDASAVHPEAYPVVERIVARIKADVRHIIGQREALK 617 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + SDFTDE+FG+PTV DI ELEKPGRDPRPEFKTAQF +GVET+NDL PGM+LEG V Sbjct: 618 GVSPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVV 677 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNV NFGAFVDIGVHQDGLVHIS+L+ KFV+DP VV+ G V VKVLEVD+ RKR+ALT Sbjct: 678 TNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTVTVKVLEVDVARKRVALT 737 Query: 719 MRLDE--QPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 MRL++ +P G G R + NSAM DA A Sbjct: 738 MRLNDAAEPARRGNGAGAGAARGADRGARRPQADNGKGAPANSAMADAFAK 788 >UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actinomycetales RepID=C1B2S2_RHOOB Length = 807 Score = 858 bits (2217), Expect = 0.0, Method: Composition-based stats. Identities = 441/768 (57%), Positives = 543/768 (70%), Gaps = 19/768 (2%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + IA E+ R QV AAV LLD G TVPFIARYRKE+TG LDD QLR LE RL YLREL+ Sbjct: 8 QRIAEELAVREGQVAAAVDLLDGGATVPFIARYRKEVTGTLDDAQLRQLEERLRYLRELD 67 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 ERR A+L+SI QGKL D L I +K LED+YLP+KPKRRT+ QIA EAG EP+A Sbjct: 68 ERRDAVLESIDSQGKLDDQLRGQIMTADTKARLEDIYLPFKPKRRTKAQIAREAGHEPVA 127 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 D L +DPS P A+ L+GAR IL+ERFAEDA L+ ++R+ +W Sbjct: 128 DALITDPSTDPASYTAEQ-------------LEGARAILVERFAEDADLVGELRELMWTR 174 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 LVS V GKE EGAKF DYF+ EP +PSHR LA+ RG E VL L+L D + Sbjct: 175 GQLVSAVRKGKETEGAKFADYFEFSEPFGKLPSHRILAVLRGEKEEVLSLTLAPDTEEPV 234 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 P + + E I G+ PAD W V W WR K+++ L + +R+ AE +A Sbjct: 235 PGEATVYEGRIAGRFGIADRGRPADRWLLDTVRWAWRTKMIVTLGIDTRMRLRQSAEKDA 294 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AA 365 ++VFA NL DLL+AAPAG RATMGLDPG RTG KVAVVDATGK+VA +TIYPH Q Sbjct: 295 VDVFATNLRDLLLAAPAGTRATMGLDPGFRTGTKVAVVDATGKVVAHETIYPHQPQNKWD 354 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA 425 + T+A L K+ VEL+AIGNGTASRET+ ++ + K++VSEAGASVYSA Sbjct: 355 ASLATLAGLVAKYGVELIAIGNGTASRETDALASELIAKSGATNLTKIVVSEAGASVYSA 414 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 S A+ E PDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS+T LAR L A Sbjct: 415 SAYASAELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLGA 474 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VVED VNAVGVD+NTASVPLL+RV+G+ +A++IVA RD+NG F++R+ L V+RLGPK Sbjct: 475 VVEDAVNAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQNGPFRSRKGLKDVARLGPK 534 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 AFEQCAGFLRI +GD+PLDAS+VHPEAYPVV +I+ + +++++GN+S LR+L +DF Sbjct: 535 AFEQCAGFLRILNGDDPLDASSVHPEAYPVVRKIVQTSGTGVREIIGNTSALRSLNPADF 594 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 D++FG+PTVTDII ELEKPGRDPRPEFKTA FA G+E ++ L+PGM LEG VTNV FG Sbjct: 595 VDDRFGLPTVTDIIGELEKPGRDPRPEFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFG 654 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 AFVDIGVHQDGLVH+S++S+ FV+DP VVK+GD+V VKVLEVD R+RI LT+RLD++ Sbjct: 655 AFVDIGVHQDGLVHVSAMSHNFVKDPRDVVKSGDVVTVKVLEVDEARQRIGLTLRLDDEV 714 Query: 726 GETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 G G N+ P+ + R AQ S + G +R Sbjct: 715 GAG----GRKNDGPRGGGAQRQDRSGGAQRQDRSGGAQRQDRSGGAQR 758 >UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular organisms RepID=B8D058_HALOH Length = 722 Score = 856 bits (2212), Expect = 0.0, Method: Composition-based stats. Identities = 338/734 (46%), Positives = 459/734 (62%), Gaps = 26/734 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN I+ E++ + QV V+LLDEGNTVPFIARYRKE+TGGLD+ Q+R +E RL Sbjct: 1 MNQRIIGQISKELKLKTNQVKGTVKLLDEGNTVPFIARYRKEVTGGLDEAQIRTIEERLE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR L++R++ +++ I EQGKLT +L + I E+EDLY PYK KRRTR A E Sbjct: 61 YLRSLQKRKEEVIRLIEEQGKLTPELEEKIKKASILQEVEDLYRPYKQKRRTRATRAKEK 120 Query: 122 GLEPLADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 GLEPLA L+W+ S PE +Y+ + + + GAR I+ E ++DA + + Sbjct: 121 GLEPLAKLMWTQELTSGNPEDIGKEYINPEVELESIEDVYQGARDIIAEWVSDDAGIRKE 180 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +R +K + ST + ++ K+ Y+D+ EP+S +P HR LA+ RG + VLQ+ + Sbjct: 181 IRKITFKQGVIQSTCKDSETDDEGKYEMYYDYREPVSKIPPHRVLAINRGEKDEVLQVKV 240 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVS---WTWRIKVLMHLETELM 296 A E+ I++ + R+ N P + ++ ++ + +E E+ Sbjct: 241 LAP------------EEDIIELIKDRVVNNPESIFYNDIIEAIKDGYKRLIAPSIEREVR 288 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 ++ E+AE+ AIN+F++NL +LL+ P MG+DP RTG KV VVD TG+L+ T T Sbjct: 289 NSLTEKAEEHAINIFSKNLRNLLLQPPLRGHTVMGIDPAYRTGCKVCVVDPTGRLLDTAT 348 Query: 357 IYPHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 IYPH Q+ +A V L ++ V +AIGNGTASRETE D+ K+ VI Sbjct: 349 IYPHPPQSRTGEAKKVVKGLINEYQVTTIAIGNGTASRETEFMVADIIKELKNTQVNYVI 408 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+EAGASVYSAS+LA +EFP+LDV++RGA+SIARRLQDPLAELVKIDPKSIGVG YQHDV Sbjct: 409 VNEAGASVYSASKLARKEFPELDVAMRGAISIARRLQDPLAELVKIDPKSIGVGLYQHDV 468 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +Q L + L VVE VN VGVDLNTAS LL VAG+ +A NIV +R+ENG+F+ R Sbjct: 469 NQKNLEKSLGNVVESAVNYVGVDLNTASPSLLKYVAGINSRVASNIVKYREENGKFETRD 528 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ---QALKDLM 591 +LLKV LG K F Q AGFLRI G NPLD + +HPE+Y + +L + D Sbjct: 529 ELLKVKGLGKKTFTQAAGFLRIPDGTNPLDNTPIHPESYQAAKGLLQDVGFKLLDITDKE 588 Query: 592 GNSSELRNLKASDFTDE----KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 L + + + G+PT+ DI+ L+KPGRDPR E F V M D Sbjct: 589 KLKEVREELDSINIKSRAEKLETGIPTLKDIVDALKKPGRDPRDELPKPIFRSDVLKMED 648 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ GM+L+G V NV +FGAFVDIGV DGLVHIS +S+ +V+DP VV+ GD VKVK+LE Sbjct: 649 LEAGMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVDDPLKVVQVGDTVKVKILE 708 Query: 708 VDLQRKRIALTMRL 721 VD +R RI+L+M+L Sbjct: 709 VDERRNRISLSMKL 722 >UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Tax=Bacteria RepID=C8RTU2_CORJE Length = 759 Score = 854 bits (2206), Expect = 0.0, Method: Composition-based stats. Identities = 427/771 (55%), Positives = 548/771 (71%), Gaps = 18/771 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D IIA E++ +V A + LLD G TVPFIARYRKE+TGG+DD+QLR LE RL Sbjct: 4 MTDCIASIIAHELEVDQPRVQATIDLLDGGATVPFIARYRKEVTGGMDDSQLRQLEQRLD 63 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLREL R++ ILKSI EQGKLTD+L + I A +K LEDLYLP+K RRT+ IA EA Sbjct: 64 YLRELAARKETILKSIEEQGKLTDELREKILAVDTKARLEDLYLPFKKSRRTKAAIAREA 123 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GL L + L + S AA YV +G AD + L GAR I++E + D L+ ++R Sbjct: 124 GLGELVEKLLAGGSPD---LAADYVQ--EGFADATSVLAGARAIVVEDISTDPDLVGEIR 178 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + +K S V+ GKEEEG K+RDYF+ EP +PSHR LA+ RG NEGVL++ Sbjct: 179 EEYFKRGRAESAVIEGKEEEGQKYRDYFEFDEPFGDLPSHRVLALLRGENEGVLRV---- 234 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 F + + + II D GL+ PAD +R V + WR K+ + ++ ++E Sbjct: 235 --NFAPGEDDEFYQGIIADRTGLQAQGDPADKFRAECVRFGWRTKLAVSSAVDVRMRLKE 292 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +A++ A++VF++NL DLL+AAPAG RAT+G+DPG R GVK AVVD TGK++ T +YPH+ Sbjct: 293 KADEAAVSVFSKNLKDLLLAAPAGHRATLGMDPGYRNGVKCAVVDGTGKVLDTVVVYPHS 352 Query: 362 GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 GQ KA ++AL KH VEL+A+GNGTASRETE+ ++ Q V++SEAGAS Sbjct: 353 GQWDKARTILSALVNKHGVELLAVGNGTASRETEKLAKEIAGLADGTKPQTVVISEAGAS 412 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSASE+AAQEFPD+DVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV+Q LA Sbjct: 413 VYSASEVAAQEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQALLAA 472 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VVED VN+VGVD+N AS PLL RVAG+T +A+NIVA+RDENG F++R++LLKV R Sbjct: 473 GLDTVVEDAVNSVGVDVNLASAPLLNRVAGVTPTLAENIVAYRDENGAFKSRKELLKVPR 532 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LGPKAFEQ AGFLRIN +PLD S VHPEAYP+V RI+ AT + L+GNS+ L L+ Sbjct: 533 LGPKAFEQAAGFLRINGAADPLDGSAVHPEAYPLVRRIVDATGVEVVQLVGNSAVLGKLR 592 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 A DF DEKFG+PTVTD++ EL+KPGRDPRP FKTA A+G+ET+ DL+PGM+LEG VTNV Sbjct: 593 AGDFADEKFGIPTVTDVLAELDKPGRDPRPTFKTATLAEGIETIKDLKPGMVLEGTVTNV 652 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 FGAFVDIGVHQDGLVH+S++S +FV+DPH VV +G++VKV+V++VD+ R RI L++RL Sbjct: 653 AAFGAFVDIGVHQDGLVHVSAMSEQFVKDPHDVVSSGEVVKVRVVDVDVPRNRIGLSLRL 712 Query: 722 DEQPGETNARRGGGNERPQNN-RPAAKPRGREAQPAGNSAMMDALAAAMGK 771 ++P A G +P+ R KPR + Q + +A+ +A G+ Sbjct: 713 QDEP---KAPTANGKSKPKKGARRKPKPRNQAPQGSMAAALKNA---GFGQ 757 >UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUT9_9GAMM Length = 836 Score = 846 bits (2187), Expect = 0.0, Method: Composition-based stats. Identities = 455/815 (55%), Positives = 570/815 (69%), Gaps = 52/815 (6%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + IA E+ + QV A + LLDEG TVPFIARYRKEITGGLDDTQLR LE RL YLRE Sbjct: 4 IAQRIAEELSVQETQVQATINLLDEGATVPFIARYRKEITGGLDDTQLRTLEERLRYLRE 63 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L+ERR+ IL SI EQ KLT +L AI A KT LEDLYLPYKPKRR+R + A EAGLEP Sbjct: 64 LDERREVILNSIREQNKLTPELETAIKAADIKTRLEDLYLPYKPKRRSRAKAAKEAGLEP 123 Query: 126 LADLLWSDPSHTPEVAAAQYVYA------------------------------------D 149 LA LW +P+ PE AA Y+ Sbjct: 124 LALDLWQNPTLVPEEAATAYIKVATVESTESAEIAESTESTESTESVESTETAESAEKTK 183 Query: 150 KGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYF 209 KG+ + AL+GAR+ILME+FAE+A+LL ++R YLW+NA + VV GKEE+GAKF DYF Sbjct: 184 KGIETVEQALEGARHILMEKFAEEASLLEELRAYLWENAIFKAQVVEGKEEKGAKFADYF 243 Query: 210 DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES----YCEQIIMDHLGLR 265 D+H + +PSHRALAMFRGR EG+LQLSL + + +E + YCE I H + Sbjct: 244 DYHGAIKRLPSHRALAMFRGRKEGILQLSLPVEGKDEEGNVQDVAPTYCEGKIAQHFSIE 303 Query: 266 LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 ADSW V TWR K+ HL+ +L+ VRE +E+EAI VF NL DLL+AAPAG Sbjct: 304 DQGRSADSWLLETVRTTWRFKMRSHLDAQLLTKVRETSENEAIKVFGTNLQDLLLAAPAG 363 Query: 326 LRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--QAAKAAMTVAALCEKHNVELV 383 LR TMGLDPGLRTGVKVAVVD TGKLV T TIYPH Q ++ + L +H VEL+ Sbjct: 364 LRVTMGLDPGLRTGVKVAVVDKTGKLVDTATIYPHAPRKQWQQSIDKLIELASQHQVELM 423 Query: 384 AIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGA 443 +IGNGT SRET++ D+ KQ P++ K++VSEAGASVYSAS++AA EFPDLDVSLRGA Sbjct: 424 SIGNGTGSRETDKLVTDLMKQHPELGLYKLVVSEAGASVYSASKIAADEFPDLDVSLRGA 483 Query: 444 VSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV 503 +SIARRLQDPLAELVKI+PKSIGVGQYQHDV++ LAR L+AVVEDCVNAVGVD+NTASV Sbjct: 484 ISIARRLQDPLAELVKIEPKSIGVGQYQHDVNKNYLARTLEAVVEDCVNAVGVDVNTASV 543 Query: 504 PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPL 563 LL RV+GL +A+NIV +R+E+G F NR +V R+G K+FEQ AGFLRI +G+NPL Sbjct: 544 SLLGRVSGLNAGLARNIVEFRNEHGIFLNRDTFKQVPRMGEKSFEQAAGFLRIMNGENPL 603 Query: 564 DASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELE 623 DAS+VHPEAYP+VE+I++ + + ++ L+G+ LRNL+ ++T++ FGVPT+TDI++ELE Sbjct: 604 DASSVHPEAYPLVEQIVSGSDKTVQSLIGDVEFLRNLQPENYTNDTFGVPTITDILRELE 663 Query: 624 KPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 KPGRDPRPEFK F +G+E + DL+ M+LEG VTNVTNFGAFVD+GVH DGLVHIS+L Sbjct: 664 KPGRDPRPEFKMPHFKEGIENIEDLEADMVLEGVVTNVTNFGAFVDVGVHHDGLVHISAL 723 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 S +V+DP VVKAGD+VKVKVLE+DL+R+R+ALTM LDE+ +R N+ P + Sbjct: 724 SRDYVKDPRAVVKAGDVVKVKVLEIDLKRQRVALTMCLDEE-----KKREHQNDVPSKKK 778 Query: 744 PAA-----KPRGREAQPAGNSAMMDALAAAMGKKR 773 P R R+ ++ ++ +R Sbjct: 779 PKPTTTNTSGRKRQRNTKRTNSTGQGRSSEQQDRR 813 >UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria RepID=B8HZ35_CYAP4 Length = 763 Score = 827 bits (2136), Expect = 0.0, Method: Composition-based stats. Identities = 371/780 (47%), Positives = 491/780 (62%), Gaps = 27/780 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+N +++A E++ +P QV A+ LL EG TVPFIARYRKE TG +++TQLR+L R Sbjct: 1 MLN--LPQLLAAELKLKPFQVANALELLAEGATVPFIARYRKERTGEMNETQLRDLFDRY 58 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YL ELEER+ AIL +I++Q KLT DL I A K LEDLYLP++PKRRTR IA E Sbjct: 59 TYLTELEERKTAILAAIAQQDKLTPDLEAKIAACQQKNTLEDLYLPFRPKRRTRATIARE 118 Query: 121 AGLEPLADLL--WSDPSHTP---EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAA 175 GLEPLA+ L + P+ P +AAA+Y+ KGV AL GA IL E A+ A Sbjct: 119 KGLEPLANFLKTLNHPTAVPTDLALAAAKYIAEAKGVRTATDALQGASDILSEEIADKAN 178 Query: 176 LLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVL 235 L A +RDYL L + V G E +F Y + P+ T+P+H LA++RG EGVL Sbjct: 179 LRAYLRDYLLTTGVLNAKVKGGHPEGTTRFEMYRHYQAPIKTIPAHNLLALYRGEAEGVL 238 Query: 236 QLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 + L D ES LR + + +++ ++ + L TE+ Sbjct: 239 VVELTFDEAAVLADLES---------QELRAKQQEVRDFYRQMLNDAFQRLLKNSLITEV 289 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 + A+ E+I F NL +LL+AAPAG+++T+ +DPG RTG KV V+D TGK + Sbjct: 290 RSAKKVEADLESIRTFEANLRELLLAAPAGMKSTLAIDPGFRTGCKVVVLDPTGKFLEYQ 349 Query: 356 TIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 TI+PH Q KA T+ L +++ VEL+A+GNGTA RET+ F ++ + + V Sbjct: 350 TIFPHQSVEQRQKAGQTLLKLIDRYQVELIAVGNGTAGRETDEFVAELLQTLEPKPVK-V 408 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +V+E+GAS+YSAS +A EFP+ D+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQHD Sbjct: 409 MVNESGASIYSASPVAIAEFPEQDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHD 468 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 V Q L +KLD VE CVN VGVDLN AS LLT V+G+T +A NI+ +R++NG F NR Sbjct: 469 VDQKLLKKKLDETVESCVNYVGVDLNLASKELLTFVSGVTPTIAGNIITYRNQNGAFSNR 528 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 +QLL+V++LGPKAFEQ AGFLRI +G NPLD + VHPE Y +VE I L + Sbjct: 529 RQLLQVAKLGPKAFEQAAGFLRIRNGQNPLDNTAVHPERYNLVETIARDLGVPLAQITQV 588 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + L N + + G PT+ DI+ ELEKPGRDPR EF A+F V+ ++DL GM Sbjct: 589 AERLNNTDLKKYVTDTIGEPTLRDILAELEKPGRDPRAEFTFARFRADVKAISDLSVGMQ 648 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 LEG VTNV NFGAFVDIGVHQDGLVH+S L+++FV DP +VK G +V V+VLEVD + K Sbjct: 649 LEGMVTNVANFGAFVDIGVHQDGLVHVSQLADRFVSDPKQIVKVGQVVNVRVLEVDEKLK 708 Query: 714 RIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 RI+L+MR D E + + P++ R KP AG ++ L A GK R Sbjct: 709 RISLSMRSD--TPERQGQSPVSSPAPKSQRSQPKP------SAGKPPTLEDLKAKFGKHR 760 >UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria RepID=B3QUX6_CHLT3 Length = 758 Score = 819 bits (2115), Expect = 0.0, Method: Composition-based stats. Identities = 351/731 (48%), Positives = 484/731 (66%), Gaps = 19/731 (2%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+N +++ E+ + QV+ + LLD+G T+PFIARYRKE TGGLD+ QLR L R Sbjct: 1 MLN--IPQVLTEELSVKLFQVENTLALLDDGATIPFIARYRKERTGGLDEIQLRTLAERY 58 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 YL+ELE+R++ +LKSI+EQGKLTD+L + I L KTELEDLYLPYKPK+RT+ IA E Sbjct: 59 EYLQELEDRKETVLKSINEQGKLTDELKEKIENCLGKTELEDLYLPYKPKKRTKATIAKE 118 Query: 121 AGLEPLADLLWSDPSHTPEV-----AAAQYVYADKGVADTKAALDGARYILMERFAEDAA 175 GLEPLA+ + S + P AA+Y+ +K V + AL GA IL E+ A+ A Sbjct: 119 KGLEPLAEFIHSLNTAAPAEGNFMEEAAKYISEEKEVKTAEEALQGASDILAEQLADKAD 178 Query: 176 LLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVL 235 A +R+++ + VS + EE K+ Y + + + H LA+ RG ++GV+ Sbjct: 179 FRAYIRNFIMDEGYFVSKIKDEFEEGTTKYEMYRNFKVKVKDIQPHNMLALRRGESDGVV 238 Query: 236 QLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 S+ +FDE SY E + NA ++ +V + + L E+ Sbjct: 239 AFSV----EFDEAVVLSYLESQ-----EIFTANADLRAFLSKMVKDAFGRLMKTTLIGEV 289 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATD 355 R +A++++I F NL +LL+++PAG++ T+G+DPG RTG K+ +D TGK + Sbjct: 290 RLDRRMKADEDSIKTFEANLRELLLSSPAGMKPTLGIDPGFRTGCKIVAIDETGKFLEYK 349 Query: 356 TIYPHTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 TI+PHTG+A KA + L EK+ EL+AIGNGTA RET+ F DV + V Sbjct: 350 TIFPHTGEAKKAKAVEELKTLIEKYKTELIAIGNGTAGRETDIFVRDVIASLETKPVK-V 408 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +V+E+GASVYSAS +A +EFPDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD Sbjct: 409 MVNESGASVYSASPVAIEEFPDLDVSVRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 468 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 V Q L +KL VE CVN VGVDLNTAS LL+ V+G+ +++N+V +R+E+G FQ+R Sbjct: 469 VDQKLLKKKLGESVESCVNFVGVDLNTASKELLSYVSGINSAISKNVVEYRNEHGAFQSR 528 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 +L+++ + GPK FEQ AGFLRI G+NPLD + VHPE+Y +V+RI + + Sbjct: 529 GELMQIDKFGPKTFEQAAGFLRIRGGENPLDNTAVHPESYSIVQRIAEDLGVPVAQVTSL 588 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 S+++++ + E+ G PT+ DI+ ELEKPGRDPR EF+ A+F+D V+ M DLQ GM Sbjct: 589 GSKIKSVDLKKYVTEEVGEPTLIDILNELEKPGRDPREEFRYAEFSDAVKAMEDLQIGMK 648 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 LEG VTNVT+FGAFVDIGVHQDGLVH+S L++ +V DP VK G IV V+VL+V+L + Sbjct: 649 LEGVVTNVTDFGAFVDIGVHQDGLVHVSELADNYVSDPLEAVKVGQIVTVRVLDVNLSLR 708 Query: 714 RIALTMRLDEQ 724 RI+L+MR +++ Sbjct: 709 RISLSMRSEDR 719 >UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria RepID=A7GKE9_BACCN Length = 722 Score = 817 bits (2111), Expect = 0.0, Method: Composition-based stats. Identities = 313/720 (43%), Positives = 448/720 (62%), Gaps = 17/720 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +++ E+ +Q+ ++L +EGNTVPFIARYRKE TG LD+ Q+R + R Y+ + Sbjct: 10 LMKMLVKELGFTEKQIRHVIQLTEEGNTVPFIARYRKEWTGSLDEVQIRAILDRWQYVMQ 69 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LEER++ +++ I E+GKLT++L + I A E+EDLY PYK KRRT+ IA E GLEP Sbjct: 70 LEERKEEVIRLIEEKGKLTEELHQQIIAATKLQEVEDLYRPYKEKRRTKATIAKEKGLEP 129 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ L P A ++ +K V + AL GA+ I+ E ++DA+ +R+ + Sbjct: 130 LAEWLLLFSKEEPLFKAKSFINTEKKVDSAEDALQGAQDIIAEMISDDASYRTWIRNVTF 189 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K + S+V +++E + Y+ + E + + HR LAM RG E +L++S+ Sbjct: 190 KKGMISSSVKDEEKDEKNIYEMYYGYEEAIQKIVPHRVLAMNRGEKEEILKVSIVPP--- 246 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 E +++I D ++ + + + + ++ + +E E+ + E AE+ Sbjct: 247 VEEVLRFLHKKVICD------ESSKSAMYVQLALEDGYKRLIQPSIEREIRKELTEVAEE 300 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--Q 363 +AI++FA NL +LL+ P + + +DP RTG K+AVVD TGK++ D IYPH + Sbjct: 301 QAIHIFAENLRNLLLQPPMKGKVVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYPHPPVKK 360 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A V ++ ++ V+++AIGNGTASRETE F +D + + +IV+EAGASVY Sbjct: 361 YDDAKQKVLSIINQYKVQMIAIGNGTASRETEEFIVDALQDVKQ-DVFYMIVNEAGASVY 419 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SAS+LA +EFPDL V R AVSI RRLQDPLAELVKIDPKS+GVGQYQHDVSQ +L L Sbjct: 420 SASDLAREEFPDLQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESL 479 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVE VN VGV++NTASVPLL V+GL++ +A+NIV R+ENG+F NR +L K+ RLG Sbjct: 480 TFVVETAVNQVGVNVNTASVPLLQYVSGLSKTVAKNIVVKREENGKFTNRAELKKIPRLG 539 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 K +EQC GFLRI G+NPLD +++HPE Y VE +L ++D +G + L+ Sbjct: 540 AKTYEQCIGFLRILEGENPLDRTSIHPEQYKNVELLLNKIGLTIQD-VGTPELQKRLEGV 598 Query: 604 DF----TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 D ++ G PT+ DII L P RD R E G+ + DL+ GM LEG V Sbjct: 599 DVSKLSSETNIGEPTLMDIIDALISPERDLRDELPKPLLKKGILKLEDLKRGMELEGTVR 658 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 NV +FGAF+DIGV QDGLVHIS LS +FV+ P +V G IVKV V +VD+++ R+AL+M Sbjct: 659 NVVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVKVWVDDVDMKKGRVALSM 718 >UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacteria RepID=C4ZFN3_EUBR3 Length = 786 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 351/771 (45%), Positives = 485/771 (62%), Gaps = 22/771 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 IA E+Q + Q +AAV+L+DEGNT+PFIARYRKE TG L+D LRNL RL+YLR Sbjct: 2 DIIAAIAEELQIKKGQAEAAVKLIDEGNTIPFIARYRKEATGSLNDEVLRNLFDRLTYLR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE+++Q +L SI EQGKLTD+L KAI ++ ++DLY PY+PKRRTR IA E GLE Sbjct: 62 NLEDKKQTVLASIEEQGKLTDELKKAILEAQTQVAVDDLYRPYRPKRRTRATIAKEKGLE 121 Query: 125 PLADLLWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA + + S AA+YV A+K VAD AAL GA+ I+ E +++A K+R+ Sbjct: 122 PLAQTILAQESSVDIMAEAAKYVDAEKDVADEAAALAGAKDIIAENVSDNADYRTKIREL 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + L+ST K E + + Y++ E LS V HR LA+ RG E +L + + A Sbjct: 182 TMQKGRLISTAKDPKAE--SVYEMYYEFDEALSKVAGHRTLAINRGEKEKILTVKIEAPT 239 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + Y ++ ++ + + AP + VV + + +E E+ + E A Sbjct: 240 EDI----IKYLKKQVITN-----DGAPTAAVLTEVVEDAYNRLIAPAIEREIRNNLTEEA 290 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 ED AI VF +NL LLM P + +G DP RTG K++VVD TGK++ T IYP Q Sbjct: 291 EDGAIKVFGKNLEQLLMQPPIAGQVVLGWDPAFRTGCKISVVDPTGKVLDTTVIYPTAPQ 350 Query: 364 AA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 +A + L +KH+V L+++GNGTASRE+E+ +++ K+ P V Q +IV+EAGAS Sbjct: 351 NKVDEAKAIIKKLIDKHHVTLISLGNGTASRESEQVIVELLKEIP-VKVQYIIVNEAGAS 409 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSAS+LA +EFP+ DV R A S+ARRLQDPLAELVKIDPKSIGVGQYQHD++Q +L+ Sbjct: 410 VYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSE 469 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 L VVEDCVN VGVDLNTASV LL ++G+++ +A+NIV +R+ENG+F +R QLLKV++ Sbjct: 470 ALGGVVEDCVNKVGVDLNTASVSLLEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAK 529 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LGPKAFEQCAGF+RI+ G NPLDA+ VHPE+Y + +L ++D+ + + K Sbjct: 530 LGPKAFEQCAGFMRISDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVGISKK 589 Query: 602 ASDFT----DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 SD+ + G T+ DI+KELEKP RDPR + V M DL PGM+L+G Sbjct: 590 VSDYKALADEAGVGEITLRDIVKELEKPARDPREDMPKPILRSDVLEMKDLTPGMVLKGT 649 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V NV +FG FVDIGVHQDGLVHIS + +++++ P V GDIV V+V+ VDL+++RI L Sbjct: 650 VRNVIDFGCFVDIGVHQDGLVHISEICDRYIKHPLEAVSVGDIVDVQVMSVDLKKQRIQL 709 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 TM++ + + G+ + + A K G ++ D Sbjct: 710 TMKIGQGTDKAGKSENSGSSK---DSAANKADRSNRNNGGRNSRNDRNGTG 757 >UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria RepID=A0LJC1_SYNFM Length = 788 Score = 811 bits (2094), Expect = 0.0, Method: Composition-based stats. Identities = 364/775 (46%), Positives = 483/775 (62%), Gaps = 18/775 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ +IAGE+ ++ AAV LL EG TVPFIARYRKE TG LD+ ++ + RL+ Sbjct: 26 MNEQHILLIAGELGLPEHRIRAAVELLGEGATVPFIARYRKEATGSLDEMEIAAIRDRLA 85 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 L L++RR +LKS+ EQ KLT++L KA+ S + LEDLYLP++PKRRTR +A E Sbjct: 86 QLDALDKRRATVLKSLEEQEKLTEELRKAVLEAGSLSALEDLYLPFRPKRRTRATVARER 145 Query: 122 GLEPLADLLW-SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLADL++ + S P A ++V D+ V AL GAR I+ ER E+A A++ Sbjct: 146 GLEPLADLIFAQNDSTDPVAEAERFVDPDRQVVCADDALAGARDIVAERINENAGARARL 205 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 R+ + VV GKE EG ++RDY+D EP++ PSHR LA+ RG EG L L + Sbjct: 206 RELFAGRGTTRARVVPGKEGEGIRYRDYYDWEEPVADAPSHRVLAVLRGEKEGFLTLHIA 265 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 E S E + + ++PA + ++ + LETE + Sbjct: 266 P----LETEALSILESLFVRG------DSPASRQVAAAAADGYKRLLAPSLETEARQLSK 315 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERA+ EAI VFA NL LLMA P G R + +DPG RTG KV +D GKL+ +T+YPH Sbjct: 316 ERADREAIRVFADNLRHLLMAPPLGARNVLAVDPGFRTGCKVVCLDPQGKLIHHETVYPH 375 Query: 361 TGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 TG+ A KAA + L +E VAIGNGTA RETE F + Q ++V+E+ Sbjct: 376 TGERASAKAAERLRDLVAGFGIEAVAIGNGTAGRETEAFVRGL---GLPTAVQIIMVAES 432 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS +A +EFPD DV++RG+VSI RRL DPLAELVKIDPK+IGVGQYQHDV Q++ Sbjct: 433 GASVYSASAVAREEFPDQDVTVRGSVSIGRRLTDPLAELVKIDPKAIGVGQYQHDVDQSE 492 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L + LD VV CVNAVGV++NTAS LLT V+GL +A+++VA RD NG F++R +L K Sbjct: 493 LKKSLDDVVMSCVNAVGVEVNTASPQLLTYVSGLGPQLARSVVAHRDRNGPFRSRNELKK 552 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V+RLGPKAF+Q AGFLR+ +NPLDAS VHPE+Y +VE + ++ DLM ++ + Sbjct: 553 VARLGPKAFQQAAGFLRVRGSENPLDASAVHPESYHIVEAMARDLGCSVTDLMRDADLRK 612 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + + + G+PT+ DI+ EL KPGRDPR F++ FA G+E DL+ GM L G V Sbjct: 613 RIDPARYVTAHVGLPTLLDILSELAKPGRDPRATFESFSFAQGIEKPEDLRAGMKLPGIV 672 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNVT FGAFVDIGVH+DGLVH+S LS+ FV+DP VV+ V V VL+VDL+R RI+L+ Sbjct: 673 TNVTAFGAFVDIGVHRDGLVHVSELSDCFVKDPRQVVRVQQRVTVTVLDVDLERGRISLS 732 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPAAKPR--GREAQPAGNSAMMDALAAAMGK 771 M+ PG + + +RP N G PA + A K Sbjct: 733 MKEGRPPGAESKKTKARGDRPVKNHSPEGAAHHGPTPPPAKGGRFNNPFEKAFKK 787 >UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUG1_RHOBA Length = 750 Score = 810 bits (2092), Expect = 0.0, Method: Composition-based stats. Identities = 369/718 (51%), Positives = 485/718 (67%), Gaps = 14/718 (1%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 + IA E+ +QV A + LL+ GNT+PFIARYRKE+TGGLD+ LR +E L L Sbjct: 40 MQSIARELNLPEKQVAAVIELLEAGNTIPFIARYRKEVTGGLDEIALRAIEDALEKHTAL 99 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 R+ +L +I EQG LT +L K I A LE LYLPYKPKRRTR IA E GL+PL Sbjct: 100 LARKATVLNTIEEQGALTAELRKQIEACTDLRTLEALYLPYKPKRRTRATIAREKGLQPL 159 Query: 127 ADLLWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 ADLL + + +V + VADT AAL GA I+ E+++ED + + + Sbjct: 160 ADLLLKQTKLPQSKQQTLQSFVNQELDVADTDAALAGALDIVAEQWSEDPTVREWMVEKG 219 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K + S V GK++E K+ Y D E S +P HR LAM RG EGVL++ L + Sbjct: 220 TKFGQITSAVKRGKKDEADKYEAYLDRSESASRIPGHRLLAMLRGEAEGVLRVGL----K 275 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 +E S+ + + + + ++ + ++ ++ ++E+A+ Sbjct: 276 MEEDRAISHVKSTFIQNRSFEFAREL-----ESAAEDCFQRLLQPATQSTVLQMLKEKAD 330 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 +EAI+VF +NLH+LLM+ PAG R T+G+DPG RTG KVAVVD TGK +A TIYP ++ Sbjct: 331 EEAIDVFGKNLHELLMSPPAGPRVTIGIDPGFRTGCKVAVVDGTGKFLANTTIYPTPPKS 390 Query: 365 AKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 A + AL +KHNVEL+AIGNGTASRET+ F + + K+ KV+VSE+GAS+ Sbjct: 391 DTAGASKQLLALIKKHNVELIAIGNGTASRETDAFVGQLIRD-NKLDVTKVMVSESGASI 449 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSASELA +EFPDLDV++RGA+SIARRLQDPLAELVK DPKSIGVGQYQHDV+QTQL + Sbjct: 450 YSASELAGKEFPDLDVTVRGAISIARRLQDPLAELVKTDPKSIGVGQYQHDVNQTQLRKC 509 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LD VE CVN VGVDLN ASVPLL+RVAG+ +A+NIV +RD NG+F +R++L KV +L Sbjct: 510 LDRTVESCVNRVGVDLNMASVPLLSRVAGIGPKLAENIVQYRDTNGRFGSRKELTKVPKL 569 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G KAFEQ AGFLRI GD PLD S VHPE+Y +V R+ +K L+GN++ + L+ Sbjct: 570 GKKAFEQAAGFLRIRGGDEPLDNSAVHPESYTLVSRMAKQLHADVKTLVGNATLSQKLQP 629 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 F D++FG+PT+ DII EL KPGRDPR EFK AQF D V++M DL+ GM+LEG +TNVT Sbjct: 630 DSFVDDRFGIPTIRDIIAELGKPGRDPRSEFKVAQFDDSVQSMEDLREGMVLEGVITNVT 689 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +FGAF+D+GVHQDGL+H+S L+N+FV DP VV GD+VKVKVLE+DL RKRIA++ + Sbjct: 690 HFGAFIDLGVHQDGLIHVSQLANQFVSDPSEVVSVGDVVKVKVLEIDLDRKRIAVSKK 747 >UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria RepID=B0CAN6_ACAM1 Length = 720 Score = 809 bits (2089), Expect = 0.0, Method: Composition-based stats. Identities = 359/726 (49%), Positives = 480/726 (66%), Gaps = 18/726 (2%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+N +I++ E+ P+++ A+ L EG T+PF+ARYRKE TG +D+TQLR L R Sbjct: 1 MLN--IVQILSQELSISPQRLQNALDLFAEGATIPFVARYRKERTGQMDETQLRQLSERF 58 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YL ELEER++ IL+SI++Q KLT+ L I A L KTELEDLYLPY+PKRRTR IA E Sbjct: 59 TYLTELEERKKTILESIAQQNKLTELLQAKIEACLLKTELEDLYLPYRPKRRTRATIAKE 118 Query: 121 AGLEPLADLLWSDPSHTP----EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 GLEPLA L + T ++A Y +K VA T+ AL GA IL E A+ A + Sbjct: 119 KGLEPLAQWLQALNKPTATLSQDLATEAARYINKDVATTEDALQGASDILAEGIADQAEI 178 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 ++ ++ VS V S E KF Y + + +H LA++RG EG+L+ Sbjct: 179 RTHLKHRFFQVGEFVSQVKSKYPEGSTKFEMYRSYQARAKNILAHNLLALYRGEAEGILK 238 Query: 237 LSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELM 296 + L D +E E++I + + +GVV + + + E+ Sbjct: 239 VELAID---EERILGDIEERVIRSKIR------AVRDFFRGVVKDAYTRLIKPSVVKEVR 289 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + A+ E+I FA NL +LL+++PAG++ T+G+DPG RTG KV +D TGK + Sbjct: 290 AACKAEADSESIQTFATNLRELLLSSPAGMKPTLGIDPGFRTGCKVVALDHTGKFLEYQA 349 Query: 357 IYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 I+PH GQ +AA TVA L + + ++L+AIGNGTA RET+ F DV K + + V+ Sbjct: 350 IFPHQAVGQRDQAAKTVARLIQTYQIDLIAIGNGTAGRETDAFVADVLKTLDRKPIK-VM 408 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+E+GAS+YSASE+A EFPDLD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV Sbjct: 409 VNESGASIYSASEIAIAEFPDLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDV 468 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 Q L +KL+ VE CVN VGVDLNTAS LLT V+G+T +A NI+A+R++NG F+NR+ Sbjct: 469 DQKLLKQKLEETVESCVNYVGVDLNTASKELLTFVSGITGAIANNIIAYRNQNGAFKNRK 528 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 QLLKV++LGPKAFEQ AGFLRI GDNPLD + VHPE+Y VV+ I A + L + Sbjct: 529 QLLKVAKLGPKAFEQAAGFLRIRTGDNPLDNTAVHPESYGVVKTISADLELPLSQIAKIP 588 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 + LR + E G PT+ DI+ ELEKPGRDPR EFK A F +G+ + DL+P M L Sbjct: 589 AHLRPGDLKTYVTETIGEPTLKDIMAELEKPGRDPRAEFKYATFKEGITELTDLKPEMEL 648 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG VTNVTNFGAFVD+GVHQDGLVHIS ++++FV+DP +VK G +VKV+VLEV+ + KR Sbjct: 649 EGIVTNVTNFGAFVDVGVHQDGLVHISQMADQFVKDPKQIVKVGQVVKVRVLEVNQKLKR 708 Query: 715 IALTMR 720 I L+MR Sbjct: 709 IGLSMR 714 >UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular organisms RepID=B3E6B1_GEOLS Length = 762 Score = 808 bits (2086), Expect = 0.0, Method: Composition-based stats. Identities = 377/760 (49%), Positives = 486/760 (63%), Gaps = 16/760 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +II E R Q+ V LL EG TVPFIARYRKE TG LD+ Q+R +E RL+Y E Sbjct: 11 IEKIITEETGLRQGQISNTVNLLQEGATVPFIARYRKEQTGELDEVQIRTIEERLAYFTE 70 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LE RRQ IL SI EQGKLT +L I AT KTELEDLYLPYKPKRRT+ IA E GLEP Sbjct: 71 LEARRQTILASIDEQGKLTPELQARIEATRQKTELEDLYLPYKPKRRTKATIAKERGLEP 130 Query: 126 LADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 LADL+ + S + AAA +V +K V + AL+GA +IL ER A+DA A VR Sbjct: 131 LADLMAAQELTSGSALEAAAPFVDHEKEVPTPETALEGAGHILAERLADDADCRAMVRRL 190 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 W+ +V+ V S K+E+ KF Y+D+ EPL +PSHR LAM RG E VL+LSL Sbjct: 191 TWEQGVMVTKVASDKKEQVTKFEMYYDYQEPLKEIPSHRMLAMRRGEKEEVLRLSLQVPQ 250 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + L + W + V ++ + +E EL ++ A Sbjct: 251 AEILAGLKH----------RLIKGESVFKPWLESVAEDAYKRLIATSIEVELRLQAKDLA 300 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 ++ AI +FA+NL +LL+A PAG R +G+DPGLR G K+A VD TG+ + TIYPHTG Sbjct: 301 DEAAIAIFAKNLKNLLLAPPAGGRRVLGIDPGLRAGSKLAAVDQTGRFLEHVTIYPHTGA 360 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + +A + L E H +E++AIGNGTA RE E F + + K V+VSEAGAS Sbjct: 361 GRVDQARADLLRLVEAHGIEMIAIGNGTAGREMELFTKETLAKAGK-HLPVVMVSEAGAS 419 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 +YSASE+A +EFP+LD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV+Q L + Sbjct: 420 IYSASEIAREEFPELDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQAMLKK 479 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VVE VN VGVDLNTAS LL+ VAG+ + + I RDENG F +R+ LLKVSR Sbjct: 480 SLDEVVESGVNYVGVDLNTASWALLSYVAGVGPALGKAIARHRDENGPFSSRKGLLKVSR 539 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 G KAFEQ AGFLRI G +PLD S VHPE YP+VE++ +L++L + + Sbjct: 540 FGAKAFEQAAGFLRIRGGKHPLDNSAVHPERYPLVEQMAKDLGVSLEELAKTPALAEKID 599 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + ++ G+PT+ DI++EL+KPGRDPR +F+TA F D + ++DLQ GMIL+G VTNV Sbjct: 600 LKKYVSDQVGLPTLRDILEELKKPGRDPRQQFQTADFRDDIREISDLQEGMILQGVVTNV 659 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 T FGAFVDIGVHQDGLVH+S L+N+F++DP+ V+ G +VKVKVL D QRKRIAL+++ Sbjct: 660 TAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVVKVKVLSADPQRKRIALSIKE 719 Query: 722 DEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAM 761 E PG R+ P + G + S Sbjct: 720 SE-PGGAAVRKAASPAAQPKQEPKSTTGGLDLSALKKSGF 758 >UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Bacteria RepID=C9RK55_FIBSS Length = 797 Score = 807 bits (2084), Expect = 0.0, Method: Composition-based stats. Identities = 357/750 (47%), Positives = 498/750 (66%), Gaps = 19/750 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 F IIA E+ +V A+ L+D+G T+PFIARYRK+ TG L++ +LR++ R YL+ Sbjct: 2 DFSAIIAEELNLEVWRVSKALELMDQGGTIPFIARYRKDQTGTLNEIELRDISHRRDYLQ 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL +R++ ILKSI EQGKLT +L I A KT LED+Y P+KPK+RTR IA E GLE Sbjct: 62 ELVDRKETILKSIEEQGKLTPELKAQIEACKDKTLLEDIYAPFKPKKRTRATIAKELGLE 121 Query: 125 PLADLLWSDPSH--TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 PLA L+W+ + T E A Y+ +KG+AD +AAL GA IL E A++A +R+ Sbjct: 122 PLARLMWAQENTGNTAEEIARIYLSEEKGLADPRAALKGAADILAEEVADNAEYRQYLRN 181 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + K +VS V E++ KF+DY+D EP+S +PSHR LA+ RG E VL+LS+ Sbjct: 182 KVEKTGVMVSKVKKDFEKQETKFKDYYDFSEPVSKIPSHRMLALRRGEKEKVLRLSIEVP 241 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + Y + ++ H ++ + + + W + +E+E+ +++ Sbjct: 242 NEEMVG----YLQNQVIKH------DSVWKPYLEDMCKDAWERLLQPSMESEVRLLLKDA 291 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 AE+EA VF++NL D+L+AAPAG +A + LDPG RTG KVAV+D GK + I PH Sbjct: 292 AEEEAFKVFSKNLQDVLLAAPAGHKAVLALDPGFRTGCKVAVLDKNGKFMDHGIIKPHEP 351 Query: 363 --QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 A AA+ + +L +K+ ++L+AIGNGTASRET+ F ++ +F +VIVSEAGA Sbjct: 352 WNDKAGAAVYLMSLIDKYQIDLIAIGNGTASRETDAFCGEMALKFKGKVPPRVIVSEAGA 411 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSAS +A EFP DV+ RGA+SI RRLQDPLAELVK+DP+SIGVGQYQHDV+Q +L Sbjct: 412 SVYSASMIAIAEFPKEDVTTRGAISIGRRLQDPLAELVKVDPQSIGVGQYQHDVNQRELK 471 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 ++LD VVE CVN VGVD+N+AS PLL+ VAGL+ +++ IV +R+ENG + +R+ L KV Sbjct: 472 KRLDEVVESCVNMVGVDVNSASAPLLSHVAGLSNTLSEAIVKYREENGAYASREDLKKVK 531 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 GPKAFEQ AGF+RI +NPLD S VHPE Y +VE++ +K+++GN+ ++ + Sbjct: 532 GFGPKAFEQAAGFMRIPGAENPLDDSAVHPENYALVEKMAEKVGVPVKEMVGNADAVKGI 591 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 K +F ++ G T+ DI+KEL+KP RDPR EF+ A+F D ++T+NDL G +EG VTN Sbjct: 592 KLDEFLSDEVGRATLEDILKELQKPSRDPRKEFRYAKFDDRIKTINDLVTGSWMEGVVTN 651 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V NFGAFVDIGVHQDGLVHIS +S+K+V D V+ GD+VKV+V+ VD +KRI+L+M+ Sbjct: 652 VANFGAFVDIGVHQDGLVHISEISDKYVTDAKDVLTVGDVVKVRVVAVDANQKRISLSMK 711 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++ T+ G G P+ R PRG Sbjct: 712 QEQ----TDGVAGAGANGPRGQR-VGGPRG 736 >UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21VK3_RHOFD Length = 807 Score = 802 bits (2072), Expect = 0.0, Method: Composition-based stats. Identities = 443/798 (55%), Positives = 543/798 (68%), Gaps = 33/798 (4%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 IA E++ + +QV AAV LLD G +VPFIARYRKE T GLDD QLR LE RL YL Sbjct: 2 QKIIAQIAQELRVQNKQVQAAVDLLDGGASVPFIARYRKEATDGLDDIQLRELEARLGYL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 REL +R Q ++K+I EQGKLT +L A+ A SK ELEDLYLP+K KRRT+GQ+A EAGL Sbjct: 62 RELRDRLQTVIKAIDEQGKLTPELLAALVAAASKQELEDLYLPFKLKRRTKGQLAREAGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKA----------ALDGARYILMERFAED 173 EPLAD L+++P P A YV A + V + + LDG R IL ER+AE+ Sbjct: 122 EPLADALFANPELVPADEAQAYVIAMRPVVEGEDKQPDFSTVPAVLDGVRDILSERWAEN 181 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEEG---AKFRDYFDHHEPLSTVPSHRALAMFRGR 230 A++ +R++LW+ L S ++ GK+E AKFRDYFD+ EP+ VPSHRALA+FRGR Sbjct: 182 PAVVQDLREWLWQEGLLKSKLMDGKDENHPDVAKFRDYFDYDEPIGRVPSHRALAVFRGR 241 Query: 231 NEGVLQLSL---------------NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWR 275 +L L +A + P S E I LG AD Sbjct: 242 GLEILDAKLVVFEPNQAPATVAPEHAAIKTRVAPAVSLAEGRIALRLGWNHQGRAADDLI 301 Query: 276 KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPG 335 + V+WTWR+K+ + E +L +RE AE AI VFA NL DLL+AAPAG R +GLDPG Sbjct: 302 RKCVAWTWRVKLSLSTERDLFTRLREDAERVAIKVFADNLRDLLLAAPAGPRVVLGLDPG 361 Query: 336 LRTGVKVAVVDATGKLVATDTIYPHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRE 393 +RTGVKVAVVDATGKLV T T+YPH + + +A LCEKH V L+AIGNGTASRE Sbjct: 362 IRTGVKVAVVDATGKLVDTATVYPHEPRKDWDGSLHILARLCEKHGVSLIAIGNGTASRE 421 Query: 394 TERFYLDVQKQFPKVTAQ---KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL 450 T++ D+ K K + + KV+VSEAGASVYSASE A+QE PD+DVSLRGA SIARRL Sbjct: 422 TDKLAADLIKLMAKSSERLMDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRL 481 Query: 451 QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA 510 QDPLAELVKIDPKSIGVGQYQHDV+Q +LA+ LDAVVEDCVN+VGVDLN ASVPLL+RV+ Sbjct: 482 QDPLAELVKIDPKSIGVGQYQHDVNQGELAKTLDAVVEDCVNSVGVDLNMASVPLLSRVS 541 Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 GL+ +A+ +V WR+ NG F NRQQLLKV+ LG K FEQ AGFLRI GDNPLD + VHP Sbjct: 542 GLSGSVAKAVVRWREANGAFANRQQLLKVAGLGAKTFEQSAGFLRIRGGDNPLDMTGVHP 601 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 E Y VVERI+A T Q + DLMG + L+ LK F +E FGV TV DI+ ELEKPGRDPR Sbjct: 602 ETYAVVERIIAKTGQPVADLMGRADMLKTLKPELFANETFGVITVKDILGELEKPGRDPR 661 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 P+FK A+F DGVE + DL+ GM+LEG V+NV FGAFVD+GVHQDGLVH+S LS+KFV D Sbjct: 662 PDFKVARFNDGVEDIKDLKEGMVLEGTVSNVAAFGAFVDLGVHQDGLVHVSQLSHKFVTD 721 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +VK GDIVKV+V+EVD+ RKRIALTM+L P ++ + N++ A + Sbjct: 722 AREIVKTGDIVKVQVVEVDVARKRIALTMKLGAAPSRQSSAGDNRFQGVANHQRAGRGAQ 781 Query: 751 REAQPAGNSAMMDALAAA 768 A A A + A A Sbjct: 782 GAAASANPPATSMSSAFA 799 >UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQS8_9FIRM Length = 733 Score = 800 bits (2067), Expect = 0.0, Method: Composition-based stats. Identities = 338/739 (45%), Positives = 451/739 (61%), Gaps = 25/739 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ IA E++ +P QV+AA +LLDEGNTVPFIARYRKE TG L+D QLR LE RL Sbjct: 1 MLGKDIYPQIAVELKVQPHQVEAAAKLLDEGNTVPFIARYRKEATGSLEDEQLRELEERL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YLR L +R++ IL I EQGKLTDDL +AI T ELEDLYLPYK K+RTR QIA E Sbjct: 61 AYLRGLVKRQEEILAKIEEQGKLTDDLRRAIEKTRKLQELEDLYLPYKQKKRTRAQIARE 120 Query: 121 AGLEPLADLLW--SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 GLEPLA+ + SD +PE AA + DKGV T+ AL GA I+ E E+A + Sbjct: 121 RGLEPLANRMLLASDQKGSPEAIAAAFCQEDKGVEATEDALQGAMDIVAETVMEEAKIRQ 180 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGAK-FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 +R+++ K L + + EE + FR Y + EP+ +P HR LA+ RG G L++ Sbjct: 181 SMREHIAKTGSLQTELAKDAPEESQQVFRMYEAYEEPVHRLPPHRILAINRGEKLGCLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 +L D E C +I L + + + + ++ +L L E+ Sbjct: 241 TLATD-------HEDNCRRIERQ---LHRAPSIWTKYLQLAIEDGYKRLLLPSLTREIRT 290 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT- 356 + E+AE AI++F NL LL+ AP MGLDPG R G K+AVVD TG+++ Sbjct: 291 ALTEKAEKHAIHLFGVNLRQLLLQAPLAGHTVMGLDPGYRNGCKMAVVDPTGRVLDYGVL 350 Query: 357 -IYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIV 415 I AA V K+ V L++IGNGTAS ETE+F + + +I Sbjct: 351 QITQSDRAREAAAARVLTSIRKNGVTLLSIGNGTASYETEQFAAALIQDNHLKDVHYLIT 410 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 +EAGASVYSAS+LA +E P+ DV +RGAVSIARR+QDPLAELVKIDP++IGVGQYQHDV+ Sbjct: 411 NEAGASVYSASKLAKEELPEYDVVIRGAVSIARRVQDPLAELVKIDPQAIGVGQYQHDVN 470 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +LA LDA +E VN VGVDLNTAS LL +AG+ A+NI+A+R+E+G F +R++ Sbjct: 471 QKELASTLDATIESAVNHVGVDLNTASAALLRHIAGINATTAKNIIAYRNEHGVFTSRRE 530 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 LLKV RLGP AF QCAGFLRI+ +PLD + VHPE+Y + E+IL L+DL Sbjct: 531 LLKVPRLGPAAFTQCAGFLRIHGAKSPLDNTPVHPESYALAEKILQKLGFTLQDLRAPEQ 590 Query: 596 ELRNLKASDFTDEKF----------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 R DE+ G PTV DI+ L PGRDPR + + + Sbjct: 591 LERMKLKRRLLDERKERELAAALQAGTPTVHDILDALVSPGRDPRADLPAPLTRQAIVKL 650 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++L+PG IL G V N+T+FGAFVDIG+H+DGL+HIS L+ + V+ P VV G +++V V Sbjct: 651 SELKPGTILRGTVRNITDFGAFVDIGLHEDGLIHISELAKRRVKHPLEVVSIGQVLRVMV 710 Query: 706 LEVDLQRKRIALTMRLDEQ 724 + VD +R RI L+++ + Sbjct: 711 ISVDEKRGRIGLSLKRVPE 729 >UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZC98_9GAMM Length = 723 Score = 795 bits (2053), Expect = 0.0, Method: Composition-based stats. Identities = 359/723 (49%), Positives = 482/723 (66%), Gaps = 5/723 (0%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + + ++Q Q++A ++L D GNTVPFIARYRKE T GLDDTQLR LE+ L Y R+ Sbjct: 4 ITQTLHRQLQLSVPQINAFIQLYDAGNTVPFIARYRKEATYGLDDTQLRQLESSLLYQRD 63 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L ER++AI KS+ Q KL+ L I +K +LE LY P+K KR ++ +IA++AGL Sbjct: 64 LAERKEAIYKSLLSQNKLSAALKTQIINIDNKRDLETLYQPFKSKRVSKAKIAMDAGLME 123 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LAD LW + +Y+ +G D K+ L GA IL+ER + D +L K+ + L Sbjct: 124 LADKLWFQDDMQADALLKRYINKKQGFNDEKSVLQGASDILIERLSLDISLSHKLVETLH 183 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + L S+V+ K++E KF+DYFD+ E L T+P+HR LA+ R ++EG L+L ++ D Sbjct: 184 RKGLLSSSVIKAKQQEAQKFKDYFDYSERLKTLPAHRYLALLRAKSEGFLRLKVDFDMHS 243 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 + K+S E +I DHLG +SWRK ++S W+ K+ E ++ ++E+A Sbjct: 244 TD--KKSVYENLIADHLGFSFARLSKNSWRKSIISEAWQTKLNKQTERQIFSLLKEQAHS 301 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA 365 A +FA NL DLLMAAPAG + +GLDPG ++G K+ V+ TGKL+ TIYPH Q Sbjct: 302 RASQLFATNLKDLLMAAPAGEKIILGLDPGFKSGCKIVVISGTGKLLDFATIYPHAPQRQ 361 Query: 366 K--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A V +K++V+L+AIGNGTASRE++ F V + + V+VSEAGASVY Sbjct: 362 SESAKKKVDEFIKKYHVQLIAIGNGTASRESDDFIKSVLED-ASLNLPCVMVSEAGASVY 420 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SASELA EFP LDVS+RGAVSIARRLQDPLAELVKID K+IGVG YQHD++Q QL + L Sbjct: 421 SASELACIEFPQLDVSIRGAVSIARRLQDPLAELVKIDAKAIGVGLYQHDLNQVQLGKNL 480 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVEDCVNA+GVD+N ASV LLT +AGL + +A+NIV +RD NG F +R L+KV RLG Sbjct: 481 QVVVEDCVNAIGVDVNRASVQLLTFIAGLNKSIAENIVQYRDTNGPFTSRSSLMKVPRLG 540 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 KA++Q AGFLRI G +PLD S VHPEAY +V RI +K L+ NS L+ L Sbjct: 541 AKAYQQAAGFLRIIEGIDPLDNSAVHPEAYALVSRIAIDQNCTVKALLKNSQALKMLDID 600 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 F E+FG ++ II EL P RDPRP+F T ++D + ++DL M ++G +TNVT+ Sbjct: 601 TFISEQFGRLSIEQIISELAAPRRDPRPDFCTVSYSDEINKISDLYTDMEIQGVITNVTS 660 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 FGAFVDIGVHQDGL+H+S L+NKFV+DP VVK G IV+V+VL VD +RKRI+L++RL + Sbjct: 661 FGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQVRVLSVDSERKRISLSLRLQD 720 Query: 724 QPG 726 Sbjct: 721 HNA 723 >UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomonas RepID=A6VTC2_MARMS Length = 720 Score = 791 bits (2042), Expect = 0.0, Method: Composition-based stats. Identities = 354/721 (49%), Positives = 479/721 (66%), Gaps = 14/721 (1%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 +S ++ E + D ++L +EG TVPFIARYRKE T G+ D LR+ R YL Sbjct: 2 NSISDNLSLEFSILKKYSDNIIQLFEEGATVPFIARYRKENTSGMSDQDLRSFYDRWQYL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 EL++R+++IL +++ ++D + K I +SK ELEDLY P+K R+T+ A E GL Sbjct: 62 VELKKRKESILALLADDSNVSDAIRKKIQNAISKNELEDLYSPFKKTRKTKADEAREQGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 + LA+L+WS A + + V ++AL+G IL E A D+ +L K R Sbjct: 122 QSLAELVWSGERSDTLSAIDAWCKQNNIVMSAESALEGVTEILNEAIANDSDVLKKGRAV 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 L K+ L S V+ GK+E+G KFRDYFD+ E ++ VP HR LA+FRG+ E +L+LS++ Sbjct: 182 LLKDGLLTSRVLRGKKEQGEKFRDYFDYQEAINKVPPHRLLALFRGKKESILKLSVSLKN 241 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWR-----KGVVSWTWRIKVLMHLETELMGT 298 + E+Y + +I HL L+ +S+R + ++ W K+L LET+++ Sbjct: 242 E------ENYPDVLIFPHLNQLLDTNLPESYRVTSLQRKYLNLAWEKKLLPKLETDVLSQ 295 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 +++RAE+ AI VFA NL DLLMAAPAG +G+DPG R GVK+AV+D G L+ IY Sbjct: 296 LKDRAEEGAIQVFADNLQDLLMAAPAGAHRVLGVDPGFRNGVKLAVIDEQGSLLDHGVIY 355 Query: 359 PHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH Q +A+ ++ L KHN+ VAIGNGTASRETE + + + + V+VS Sbjct: 356 PHGPQNRTQEASTMLSQLIRKHNIGWVAIGNGTASRETEALVKALISE-SNLDCRAVVVS 414 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS +A QEFPDLDV++RGAVSIARR QDPLAELVKIDP++IGVGQYQHDV Sbjct: 415 EAGASVYSASPIAIQEFPDLDVTIRGAVSIARRFQDPLAELVKIDPQAIGVGQYQHDVKV 474 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 L++ L VVEDCVN VGVD+N ASV LL+ V+GLT +AQNIV +R + G+ ++R +L Sbjct: 475 ALLSKSLANVVEDCVNRVGVDINLASVSLLSYVSGLTNRLAQNIVDYRQQKGRIESRSEL 534 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 LK+ +G K FEQCAGFLRI +G LD S VHPE+YP+V+++ A + DL+ NSS Sbjct: 535 LKIKGIGDKCFEQCAGFLRILNGKEALDQSGVHPESYPLVQKMAAQLKLKANDLLNNSSA 594 Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 L+ LK + + G T TDI+ EL KPGRDPRPEF+ A F V+ + D+Q GM LEG Sbjct: 595 LQQLKQFAPSFAQAGDFTYTDILNELAKPGRDPRPEFRYASFDHSVQKLEDVQEGMTLEG 654 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 VTNV FGAFVD+GVHQDGL+HIS L+++FV+DP +V+ G +VKV VLEVD+QRKRIA Sbjct: 655 VVTNVAAFGAFVDLGVHQDGLIHISQLADRFVKDPRDLVRVGQVVKVTVLEVDVQRKRIA 714 Query: 717 L 717 L Sbjct: 715 L 715 >UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Bacteria RepID=D0LLY3_HALO1 Length = 801 Score = 790 bits (2040), Expect = 0.0, Method: Composition-based stats. Identities = 361/745 (48%), Positives = 484/745 (64%), Gaps = 18/745 (2%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E+ E+V A V LL EGNTVPFIARYRKE+TGGLD+ Q+R +E R +YL ELEER Sbjct: 13 LAEELGLPAERVAAVVGLLSEGNTVPFIARYRKEVTGGLDEVQIRTIEERRTYLLELEER 72 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 RQ+IL SI EQGKLT +L + A +K ELEDLYLPYKPKRRTRG +A E GL PLA+ Sbjct: 73 RQSILSSIEEQGKLTGELRAKLLACTTKAELEDLYLPYKPKRRTRGMMARERGLLPLAER 132 Query: 130 LWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARY------ILMERFAEDAALLAKVRD 182 + + P+ P AA +V A V + D I+ E AE+A + A VR Sbjct: 133 ILAQPAEGDPRAEAAAFVRAGDDVDKDQRVADADAALAGARDIVAEMTAENAEVRAFVRQ 192 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 LVS V+GK + KF Y++ E + T+P+HR LA+ RG EG+L+ + Sbjct: 193 SFADEGVLVSEAVAGKTDAPTKFEQYYEFSEAVKTIPAHRFLAIRRGEAEGILRARVELA 252 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 P+ P Q+ +D ++P ++ ++R + +E ++ ++ R Sbjct: 253 PE---PVLMRIELQMGLDR------SSPFSGQMSEAIADSYRRLLAPSVENDMRVELKMR 303 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 ++ A++VFA N+ +LL+AAP G RA +G+DPGLRTG K A VD+TGK + T Y G Sbjct: 304 SDRAAVDVFADNVRNLLLAAPLGTRALIGVDPGLRTGCKCAAVDSTGKFLGHMTFYLTKG 363 Query: 363 QAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 + A + A K + V +GNGT RET F ++ + +VSEAGA Sbjct: 364 ERAVEQGRREFLAFLSKFDPVGVTVGNGTGGRETAAFVRQALREAGREELFVALVSEAGA 423 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSAS++A +EFP+LD+++RGA+SIARRLQDPLAELVKI+PK+IGVGQYQHDV Q LA Sbjct: 424 SVYSASDVAREEFPELDLTIRGAISIARRLQDPLAELVKIEPKAIGVGQYQHDVHQPLLA 483 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 +KL VVE CVN VGV+LNTAS PLL+ V+G+ + +A+ IV+ R++NG F+ R+QLL VS Sbjct: 484 KKLGEVVESCVNHVGVELNTASAPLLSYVSGIGKSVAKKIVSHREQNGAFRTREQLLAVS 543 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 LGPKAF+Q AGFLRI G+ LD+S VHPE Y +V RI A +++L+G+S + Sbjct: 544 GLGPKAFQQAAGFLRIRGGEQVLDSSAVHPERYDLVLRIAADLGVGIQELVGDSKLAERI 603 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + + G PT+ DI+ EL+KPGRDPR EF+ +F D V T+ DL+P M LEG VTN Sbjct: 604 DIARYIGDGVGEPTLRDIVDELKKPGRDPRDEFEPPRFRDDVNTLEDLKPEMQLEGVVTN 663 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VT+FGAFVD+GVHQDGLVHIS LS++FV+DP VVK GD +KV+VL+VDL RKRIAL+ R Sbjct: 664 VTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVRVLDVDLARKRIALSAR 723 Query: 721 LDEQPGETNARRGGGNERPQNNRPA 745 D E RGG N++ ++ A Sbjct: 724 SDGGRKEQERGRGGRNDQERSGAGA 748 >UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria RepID=C6E3L9_GEOSM Length = 756 Score = 788 bits (2036), Expect = 0.0, Method: Composition-based stats. Identities = 368/764 (48%), Positives = 489/764 (64%), Gaps = 27/764 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 II E V V LL+EG TVPFIARYRKE TG LD+ Q+R +E L Y R Sbjct: 10 QLLEIIVEESGLPRGGVLQTVALLNEGGTVPFIARYRKEQTGELDEVQIRQIEDLLIYHR 69 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL ER+ +LKSI EQGKLT +L+ I + KT+LEDLYLPYKPKRRT+ IA E GLE Sbjct: 70 ELAERKVTVLKSIEEQGKLTPELSARIASCRKKTDLEDLYLPYKPKRRTKATIAREKGLE 129 Query: 125 PLADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 PLA+L+ + + +P AAA +V A+ GV D +AAL GA +I+ E+ +E+A L +VRD Sbjct: 130 PLAELIAAQELATGSPTEAAAPFVNAELGVTDAEAALAGAAHIIAEQLSENADLRGRVRD 189 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + S ++ ++ KFR Y D+ EPL ++PSHR LAM RG E VL+L+L A Sbjct: 190 LTREQGIFGSQLMGDGADKDGKFRMYHDYQEPLKSIPSHRMLAMRRGEKEDVLRLALLAP 249 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + + + G+ + + ++ + +E EL + R Sbjct: 250 EEEIVGRLKGALVKRESIFKGI----------LEAAAADAYKRLIAPSIEVELRLEAKTR 299 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 A++ AI VFA+NL +LL+ PAG R +G+DPGLRTG K+A + TG+ + TIYPHTG Sbjct: 300 ADEAAIAVFAQNLKNLLLLPPAGGRRVLGIDPGLRTGCKLAAISETGRFLEHVTIYPHTG 359 Query: 363 QAAKAAMTVAA--LCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 A A + E+++ L+AIGNGT RETE F D ++ + A+ V+V+EAGA Sbjct: 360 GAKAEAAGAELAGMVERNDCRLIAIGNGTGGRETEIFVRDALRK-AGIKAETVMVNEAGA 418 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 S+YSAS++A +EFP+LD+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQHDV+QT L Sbjct: 419 SIYSASDIAREEFPELDLTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVNQTLLK 478 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 + LDAVVE CVN VGVDLN+AS LL+ VAGL+ + IV RDE G F +RQ LLKV+ Sbjct: 479 KALDAVVESCVNFVGVDLNSASWALLSYVAGLSESQGRAIVRHRDEQGAFASRQSLLKVA 538 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 R GPKAFEQ AGFLRI G+NPLD + VHPE Y VVE++ A +L L+ + + Sbjct: 539 RFGPKAFEQAAGFLRIRGGENPLDNTAVHPENYAVVEKMAADLGVSLSQLVADPGLSAGI 598 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + + G+PT+ DI+ EL+KPGRDPR +F++A F + V T+ DL+ GMIL+G VTN Sbjct: 599 RIERYVTDTIGIPTLRDILAELKKPGRDPREQFQSASFREDVVTIADLKEGMILQGVVTN 658 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V FGAFVDIGVHQDGLVH+S L+++F +DP+ VK G IVKVKVL D +RKRI+L+++ Sbjct: 659 VAAFGAFVDIGVHQDGLVHVSQLTHRFTKDPNDAVKVGQIVKVKVLSADPERKRISLSIK 718 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 E E+ Q N KP+ +E SA A Sbjct: 719 QAE------------PEKAQKNAEVRKPQPKEKPVNEQSAWEKA 750 >UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NGU9_9LACT Length = 751 Score = 787 bits (2032), Expect = 0.0, Method: Composition-based stats. Identities = 322/725 (44%), Positives = 444/725 (61%), Gaps = 20/725 (2%) Query: 4 DSFCRIIAGEI-QARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 + ++ E+ Q +P+Q+D + LL +GNTVPFIARYRK+ TG LD+ Q+R +E R Y Sbjct: 30 ERSVALVKAELTQYKPKQIDTVLGLLQDGNTVPFIARYRKDQTGSLDEVQIREIEERQRY 89 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAG 122 L E+R++ I + I EQGKLT ++ A++ + T LED+Y PYK KRRT+ IA EAG Sbjct: 90 LENFEKRKEEISRLIDEQGKLTPEITAALSKATTLTALEDIYRPYKQKRRTKATIAKEAG 149 Query: 123 LEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 LEP A L + E AA ++ +KG+ + A++GA I+ E +++A ++R Sbjct: 150 LEPFALWLLMTTKDSVEEKAATFINEEKGILTVEDAINGAVEIIAEWISDEAKYRKQLRQ 209 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + KN + S V + +E + Y+D+ EP+ ++ HR LA+ R E V+++++ D Sbjct: 210 FTQKNGVVKSVVKKEELDEKKVYEMYYDYEEPVKSIVPHRVLALNRAEKEDVVRVTIEVD 269 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + ++ ++P+ +G + +++ + +E E+ + E+ Sbjct: 270 VTNPLTKIKEE---------KIKNPSSPSAPIVEGAIEESYKRFIGPAIEREIRNELSEK 320 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 A+ +AI +F NL +LL+ AP + +GLDP RTG K+AV+D TGK++ IYPH G Sbjct: 321 AQTQAIAIFGENLKNLLLQAPMKGQVILGLDPAYRTGCKLAVIDETGKVLGKSVIYPHVG 380 Query: 363 ----QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 + A+A + E++ V LVAIGNGTASRE+E+F + +Q P+ IVSEA Sbjct: 381 ASEAKRAQAGGQFRRIVEQYGVTLVAIGNGTASRESEQFVAEQLRQIPR-KVVYTIVSEA 439 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS++A QEFPD V R AVSIARRLQDPLAELVKIDPK++GVGQYQHDV + Q Sbjct: 440 GASVYSASDIARQEFPDYQVEERSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDVPEKQ 499 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L +LD VVE VN VGV++NTAS LL +AGLT+ A N+V +RDENG+F NR QL K Sbjct: 500 LDEQLDFVVETAVNKVGVNVNTASAALLEHIAGLTKTTAANVVTFRDENGKFTNRTQLKK 559 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V RLGPKA+EQ GFLRI G NP D + +HPE+Y V IL A K +G+ Sbjct: 560 VPRLGPKAYEQAVGFLRIIDGTNPFDGTDIHPESYDVAIAILKKAN-AEKLALGSPELEE 618 Query: 599 NLKASDFTDEK----FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 LK + + K G T+ ++ L KPGRDPR E V M DLQ GM L Sbjct: 619 ALKGLNTKELKEEFGIGQETLELVMDGLLKPGRDPREEVAGPILRSDVLKMEDLQVGMEL 678 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG V NV +FGAFVDIGV QDGLVHIS L FV+ P VV GDIV V V E+DL++ R Sbjct: 679 EGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVTVWVTELDLKKGR 738 Query: 715 IALTM 719 + L+M Sbjct: 739 VGLSM 743 >UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria RepID=D1BNV4_VEIPT Length = 770 Score = 784 bits (2026), Expect = 0.0, Method: Composition-based stats. Identities = 327/731 (44%), Positives = 447/731 (61%), Gaps = 21/731 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ II E+ +P+QV AAV LLDEGNTVPFIARYRKE+TG L D QLR +E R+ Sbjct: 1 MSERMFAIIGSELNVKPKQVQAAVELLDEGNTVPFIARYRKEVTGELQDEQLRTIEERIK 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR LE RRQ I+ SI+EQ K+TD+L K++ A ELEDLYLPY+PK+RTR IA E Sbjct: 61 YLRNLETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPYRPKKRTRAMIARER 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLAD++ +D + + Y + V + A+ GA I+ E ++ A A +R Sbjct: 121 GLEPLADMIINDTVTSGDPLEIAKEYITEEVPTPEDAIQGASDIVAEIVSDSADFRAYLR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 +W + + + SG+EEE +F Y ++ EP+ +PSHR LA+ RG G L+L L Sbjct: 181 KKMWNEGFIQAEL-SGEEEEQQQFLQYAEYAEPVRQMPSHRILAVNRGEKLGALKLVLTV 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 E+ ++ V+ ++ + LE E+ + E Sbjct: 240 PGDTYVAYMVQKLEKNPKSIFA---------DYKAAAVADAYKRLIFPALEREIRNELTE 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 A+++AI VF NL +LL+ P MGLDPG RTG K+A++D G ++ Y Sbjct: 291 NADEQAIKVFGVNLKNLLLQPPLAGHVIMGLDPGYRTGCKMAIIDQQGNVLDYGAYYLTN 350 Query: 362 GQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 + +A +A K V L++IGNGTAS ETE+F + ++ + +I +EAG Sbjct: 351 SEKLRKEAQKVLADKIRKFKVTLLSIGNGTASYETEQFASTMIEE-ETLDCHYIITNEAG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSAS+LA E PDLDV++RGAVSIARR+QDPLAE VKIDPKSIGVGQYQHDV+Q QL Sbjct: 410 ASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKIDPKSIGVGQYQHDVNQKQL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 LD VVE VN VGV+LNTAS +L VAG++ +A+NIVA+R ENG F++R++LLKV Sbjct: 470 THTLDQVVETVVNHVGVELNTASPAILQHVAGISSAVAKNIVAYRQENGVFKSRKELLKV 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR- 598 RLGP AF QCAGFLR+ HG NPLD ++VHPE+Y + ERI+ LKDL S Sbjct: 530 PRLGPAAFTQCAGFLRLQHGKNPLDNTSVHPESYELAERIIGELGFTLKDLQDKSQLEAL 589 Query: 599 ----NLKASDFTDEKF--GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 L +D K GVPTV DI+ L KPGRDPR + V ++ D++ G Sbjct: 590 QVKLPLVDADKMAAKLDAGVPTVRDILAALAKPGRDPREDLPAPLTRKHVVSLEDIKVGT 649 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 +++G V NV +FGAFVD G+ +GL+H S L N + P V+ GDI++ +++ VD++R Sbjct: 650 VVKGTVHNVVDFGAFVDFGLKTNGLLHRSELCNSR-QHPSDVLAVGDIIEAQIISVDVKR 708 Query: 713 KRIALTMRLDE 723 RI L+++ + Sbjct: 709 NRIGLSVKALQ 719 >UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2 Tax=Planctomyces RepID=A6C5P8_9PLAN Length = 828 Score = 779 bits (2012), Expect = 0.0, Method: Composition-based stats. Identities = 307/777 (39%), Positives = 451/777 (58%), Gaps = 31/777 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + IA E+ +Q+ + LLDEGNTVPFI RYRKE TG LD+ Q+R+++ R+ Sbjct: 17 ERDAEQIASELNLTSQQILNVIALLDEGNTVPFITRYRKERTGNLDEVQIRDIQKRVQSK 76 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 R++ ER IL+ I Q +LT +L I + LEDLY PY+PKR +R A + G Sbjct: 77 RQIWERASTILRLIEAQQQLTPELKAEIEKADTLKRLEDLYRPYRPKRTSRAATARKHGF 136 Query: 124 EPLADLLWSDPSHTPEV--AAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 EPLA+ +W+ + + AA QY A+ G T+ L GA IL+E+ ED + R Sbjct: 137 EPLANAIWAGDASIDNLTNAALQYTKAEDGARTTEDVLKGAADILVEKIGEDPDVREISR 196 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 W++ L EE G ++RDYF++ E + VP HR +A+ RG G L++ Sbjct: 197 KIAWRSGKLTVNATKKAEESGQEYRDYFNYSEQVVKVPHHRTMALNRGEKSGALRVRF-- 254 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 E +S C I L LN + V++ + L+ E+ + E Sbjct: 255 -----EWADDSACMSIARH---LNLNGHRFHEFLTEVINDALSRLIQPSLDREIRRELTE 306 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +AE A++VFA+NL +LL+ P + + +DPGLRTG K+AV+D G VATD +Y Sbjct: 307 KAEKHAVSVFAQNLKNLLLQPPLQGQRILAIDPGLRTGCKLAVLDELGYCVATDLVYVTG 366 Query: 362 GQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 K A +A + +H +LVAIGNGTA RETE ++ +Q A+ +IV+EAG Sbjct: 367 SADKKEFARKKLAEVMTEHQCQLVAIGNGTACRETEEIITEMIEQ-DLPQARYLIVNEAG 425 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 AS+YSAS +A +EFPDLD ++RG +SI RRLQDPL+ELVKIDP+ +GVG YQHDV+ +L Sbjct: 426 ASIYSASPVAREEFPDLDATIRGTISIGRRLQDPLSELVKIDPQHLGVGMYQHDVNSKRL 485 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 LD V+E CVN VGV+LNTAS LL V+G+ +++A+ I WR+++G FQNR+QLL V Sbjct: 486 KESLDEVIESCVNYVGVNLNTASASLLRHVSGMNQLIARRITEWREKHGSFQNRKQLLDV 545 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 + +G F Q AGFL+I+ G PLD++ +HPE+Y ++ + L ++ + + Sbjct: 546 AGVGEATFTQAAGFLKIDQGSEPLDSTWIHPESYEHAYKVFEQLELPPDSLKSSAQDRAS 605 Query: 600 L--------KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 + K + K G+PT+ DI++ + +P RDPR + F GV + L G Sbjct: 606 IIEKVGQIDKGGLSKNLKIGLPTLEDILEAIVRPRRDPRADLPGPIFKQGVLKLEQLTEG 665 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 M L+G V NV +FGAFVD+G+ L+H+S ++N F+E+P+ V GD++ VL VDL+ Sbjct: 666 MELQGTVLNVVDFGAFVDVGLKDSALIHVSEMANHFIENPYQFVSVGDVITAWVLGVDLE 725 Query: 712 RKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPR-GREAQPAGNSAMMDALAA 767 R+R++LT+ +PG R+ +RP +PA KP + A+PA SA A + Sbjct: 726 RRRVSLTLI---RPG--TDRQPKKAQRP--TKPAEKPASAKTAKPATASAKKTADSG 775 >UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular organisms RepID=C5D4D6_GEOSW Length = 728 Score = 765 bits (1976), Expect = 0.0, Method: Composition-based stats. Identities = 334/735 (45%), Positives = 462/735 (62%), Gaps = 17/735 (2%) Query: 1 MMN-DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 M+N ++ +IA E+ +QV + L +EGNTVPFIARYRKE+TG LD+ Q+R++ + Sbjct: 1 MLNREALMDLIANELHLSTKQVSNVISLSEEGNTVPFIARYRKEMTGALDEVQIRDILEK 60 Query: 60 LSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAI 119 +YL+ LE+R++ +L+ I EQGKLTDDL AI ++EDLY PY+ KRRT+ IA Sbjct: 61 WNYLQNLEQRKEEVLRLIDEQGKLTDDLKNAIINATKLQQVEDLYRPYRQKRRTKATIAK 120 Query: 120 EAGLEPLADLLWSDP-SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 E GLEPLA+ LW+ P PE A +++ +K V + AL GA+ I+ E+ ++DA Sbjct: 121 EKGLEPLAEWLWTCPMRPRPEEKAQEFIQPEKEVRTVEEALQGAKDIIAEKVSDDAQFRQ 180 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 +R + WK ++STV + +E + Y+++ EP+ + HR LA+ RG EGVL++S Sbjct: 181 WIRQHTWKKGVIISTVKESENDEKKVYEMYYEYEEPVHRIVPHRVLALNRGEKEGVLRVS 240 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + A + +Y ++ I+ + +PA S + ++ + +E ++ Sbjct: 241 IQAPVE----DIMTYLQKHIITN-----PQSPAASLLSEAIEDGYKRLIEPSIERDIRNE 291 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E+AE+ AI++FA NL LL+ P + +G+DP RTG K+AVVD TGKL+ D IY Sbjct: 292 LTEKAEERAIHIFAENLRKLLLQPPLKGKIVLGIDPAYRTGCKLAVVDETGKLLKIDVIY 351 Query: 359 PHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH Q +A + + E+++VE++AIGNGTASRETE+F D KQ K +IV+ Sbjct: 352 PHPPQQQIEEAREKLIRIIEEYHVEMIAIGNGTASRETEQFVADTLKQVDK-EIFYLIVN 410 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS+LA QEFPDL V R AVSIARR+QDPLAELVKIDPKS+GVGQYQHDVSQ Sbjct: 411 EAGASVYSASDLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHDVSQ 470 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 +LA+ L VVE VN VGV++NTASV LL V+GLT+ +++NIV R+E G+F+NR++L Sbjct: 471 KKLAQSLQFVVETVVNQVGVNVNTASVSLLQYVSGLTKTVSENIVKRREEQGKFKNREEL 530 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 + RLG K +EQC GFLRI GD PLD + +HPE Y V+R+L + + Sbjct: 531 KSIPRLGAKTYEQCIGFLRIIDGDEPLDRTPIHPERYEEVKRLLHQIGFTTEHIGSEELR 590 Query: 597 LRNLKA---SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + G T+ DII L +P RDPR E + M DL+ GM Sbjct: 591 QALQSLSIPDTAAELGIGELTLQDIIDALIRPERDPRDELPKPLLRKDILKMEDLKRGME 650 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 LEG V NV +FGAFVDIGV QDGLVHIS LS ++V P VV GD+VKV V VDL + Sbjct: 651 LEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQYVRHPLDVVSVGDVVKVWVDNVDLDKG 710 Query: 714 RIALTMRLDEQPGET 728 RI+L+M E+ +T Sbjct: 711 RISLSMIPPEESEKT 725 >UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHM7_PETMO Length = 720 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 300/729 (41%), Positives = 430/729 (58%), Gaps = 29/729 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I ++ + Q + V LL+EGNTVPFI+RYRKE TG LD+ ++R +E Y + Sbjct: 2 DIIKTITEDLNIKLFQTENTVELLNEGNTVPFISRYRKERTGNLDEEKIRRIEELFKYYQ 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE ++ +LKSI +QGKLTD L + I T TELEDLYLPYK +++T AIEAGLE Sbjct: 62 NLEGYKKTVLKSIEDQGKLTDALKEKIINTKKMTELEDLYLPYKKRKKTNADKAIEAGLE 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 P A+ + + + + + + +G YI+ + FA D +R + Sbjct: 122 PAANKVLLGNIKSLDELEE---FVSEEYDNIDKVTEGISYIIGQTFAHDKENRESLRKHY 178 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K + S EE K+ Y + + +S +P++R LA+ RG E VL + L D + Sbjct: 179 EKFGKIHSEKKKEFVEEATKYDMYHEFTQEISKIPNYRVLALNRGEKEKVLNVKLIIDDE 238 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 + E K Y + N D + + + + +E E+ + E+AE Sbjct: 239 WLEKEKSRY-----------KTGNEICDKIISKGLIYGFTNMLNPSIEREIRQNLTEKAE 287 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ- 363 + AI +FA+NL LL+ P + + +DPG RTG KV +D G +A DTI+P Q Sbjct: 288 EGAIVLFAKNLRQLLLTPPLKNKRVLAIDPGFRTGCKVVALDEMGNFLANDTIFPVPPQN 347 Query: 364 -AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + + L +K+NV L+AIGNGTASRET++F +D+ K+ K+ + + V E+GASV Sbjct: 348 DIENSEKIMMGLIQKYNVNLIAIGNGTASRETQQFVVDLIKK-NKLNLKYIFVDESGASV 406 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS+LA +EFP+ DV++RGA+S+ RR+QDPLAE VKIDPKSIGVGQYQHDV+Q +L K Sbjct: 407 YSASKLAKEEFPEYDVTVRGAISLGRRIQDPLAEFVKIDPKSIGVGQYQHDVNQKKLKEK 466 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LDA VE VN VGV+LNTAS LL V+G+T +A+ IV +R +NG F R LL V Sbjct: 467 LDATVESVVNLVGVNLNTASYSLLEYVSGITSSLAKKIVQYRQKNGSFNKRADLLNVKGF 526 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL-MGNSSELRNLK 601 G KAFEQ AGFLRI G+NPL+ + +HPE+Y E+++ L DL + + LK Sbjct: 527 GEKAFEQSAGFLRIIDGENPLEITGIHPESYEAAEKLINIHGYRLDDLKIKEKLDPLKLK 586 Query: 602 ASDFTDEK-----------FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 S +EK G T+ DI+KEL+KPGRDPR E Q D + DL+ Sbjct: 587 VSQLLNEKENLKSISEELEIGEYTLIDILKELQKPGRDPRDEMPQPQLMDDILKFEDLKE 646 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 M L G +TN+T+FGAFVD+G+ ++GL+H S+L+ +FV P +V+ DIV+V+++ +D Sbjct: 647 SMRLSGKITNITDFGAFVDLGIKENGLIHKSNLAERFVAHPTDIVQINDIVEVEIINIDK 706 Query: 711 QRKRIALTM 719 R+RI L + Sbjct: 707 TRRRIGLRL 715 >UniRef50_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding domain) n=14 Tax=Bacteria RepID=A9NHV1_ACHLI Length = 724 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 292/732 (39%), Positives = 432/732 (59%), Gaps = 27/732 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ ++ E++ +V + LL +G T+PFIARYRKE+TGG+D+ Q+ + Sbjct: 1 MNEQLVMSVSKELKLPTAKVKVVLELLADGATIPFIARYRKEMTGGMDEEQIFAINQMFE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y L +R++ +++ I E+G LT++L I + E+EDLY PYK K++T+ AI Sbjct: 61 YANNLFKRKEDVIRLIDEKGMLTEELKNEILSATKLVEVEDLYRPYKEKKKTKATEAIAK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA L + P A +Y+ + V TK AL+GA +I+ E ++DA +R Sbjct: 121 GLEPLAKFLLTFPKTDVVEEAKKYL--NDEVLTTKDALEGAGFIISELISDDANYRKYLR 178 Query: 182 DYLWKNAHLVSTVVSGKEEEGAK--FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 DYL+++ LVS + +E K + Y+D+ + ++ + H+ LA+ R +E V+ + L Sbjct: 179 DYLFRHGVLVSNLRKNGKELDVKGVYEIYYDYSQSITKIKPHQILAINRAEDEKVITVKL 238 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 + + E+Y + ++ AD + + + + + + +E E+ + Sbjct: 239 DGTKE----AMENYLIKQVIKKPS------NADMYLEEAIKDSLKRLIFPSIEREIRSEL 288 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 E+ +++AI VFA NL LL+ P + +G+DP RTG K VVD TG+++ IYP Sbjct: 289 SEKGQEQAIEVFADNLSKLLLQPPLKGKVILGIDPAFRTGCKWTVVDQTGQVLEKGVIYP 348 Query: 360 H---------TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA 410 H + +A + + L +K+ ELVAIGNGTASRETERF ++V K + A Sbjct: 349 HETTQGGRPDPEKVFQAELQLKVLYKKYKFELVAIGNGTASRETERFVVEVIKN-QNMDA 407 Query: 411 QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY 470 + VIV+EAGASVYSAS++A +EFPD V R A SIARRLQDPL+ELVKIDPKSIGVGQY Sbjct: 408 KYVIVNEAGASVYSASDVAREEFPDFSVEERSAASIARRLQDPLSELVKIDPKSIGVGQY 467 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 QHD++ +L L+ VV VN VGV+ NTAS LLT V+GL++ +A+N+V +R++ G F Sbjct: 468 QHDIAPKKLDDSLNFVVTQVVNQVGVNANTASKSLLTYVSGLSKNVAENLVNYRNKIGGF 527 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 ++R+ LLKV LGPK +EQ GFLRI D LD +++HPE+Y + ++ + +D+ Sbjct: 528 KSREDLLKVPSLGPKTYEQAVGFLRIPESDEILDQTSIHPESYQLAREVMKKLNISSEDI 587 Query: 591 MGNSSE--LRNLKASDFTDEKFGVP-TVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 S N+ E T+ I+ P RDPR ++ V ++ D Sbjct: 588 GKPSIRLWTDNIDREQVARELHTDKYTLDLILDAFVAPMRDPRDDYAQPILKSDVLSIED 647 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ GM LEG V NVT+FGAFVD+G+ DGLVHIS LSNKFV+ P VV G IV V VL Sbjct: 648 LKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVTVWVLN 707 Query: 708 VDLQRKRIALTM 719 +D + ++ LTM Sbjct: 708 IDRDKGQVGLTM 719 >UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria RepID=B1ZSU7_OPITP Length = 794 Score = 759 bits (1961), Expect = 0.0, Method: Composition-based stats. Identities = 345/749 (46%), Positives = 453/749 (60%), Gaps = 22/749 (2%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 N +A E+ + QV A +LL EG TVPFIARYRKE+TG LD+TQ+ + RL + Sbjct: 5 NPDHVLRLAQELNVKVFQVAATAQLLAEGATVPFIARYRKEVTGELDETQVLAIRDRLDH 64 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAG 122 L ++ERR AIL S+ E+ LT L +AI A + T LEDLYLP++PK+RTR IA E G Sbjct: 65 LTAVDERRAAILSSLKERSLLTPALEQAIQAADTLTALEDLYLPFRPKKRTRATIAKEKG 124 Query: 123 LEPLADLLWSDPSHTP-----------EVAAAQYVYADKGVADTKAALDGARYILMERFA 171 LEPLA+LL++ T E A + AL GAR I+ ER + Sbjct: 125 LEPLAELLFAQDPATDAVAAAQAYVGREYVADDGKNQKSKIETVDEALAGARDIIAERIS 184 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEE--EGAKFRDYFDHHEPLSTVPSHRALAMFRG 229 +D ++R +A + S V+ GK+ E AK++DYF+ EPL+ PSHR LAM RG Sbjct: 185 DDKDARTRLRARYQSDAIVSSKVLIGKDADPEAAKYKDYFEWSEPLAKAPSHRILAMRRG 244 Query: 230 RNEGVLQLSLNADPQF----DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRI 285 E L + + + + P ++ + LN+ +D + V+ + Sbjct: 245 EKESFLMMRVTLPDETLAVAEVAPLFVKAARVAPNASSSTLNSTCSDQV-QLAVADACKR 303 Query: 286 KVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVV 345 + +ETE+ ++RA++ AI VF N+ +LL+A P G +A + +DPG RTG KV ++ Sbjct: 304 LLCPAMETEMRLDSKKRADEAAIRVFTGNMRELLLAPPLGQKAVLAIDPGFRTGCKVVLL 363 Query: 346 DATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQF 405 D GKL+ D ++P +A +A + NVE +AIGNGTA RETE F K Sbjct: 364 DRQGKLLHNDVVFP-DRHEQEARDKLAGFVQFFNVEAIAIGNGTAGRETEAFVR---KLG 419 Query: 406 PKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSI 465 T V+V+E+GAS+YSASE+A +EFPD D+++RGAVSI RRL DPLAELVK+DPKSI Sbjct: 420 LPATIPIVMVNESGASIYSASEVAREEFPDHDLTVRGAVSIGRRLMDPLAELVKLDPKSI 479 Query: 466 GVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRD 525 GVGQYQHDV Q L R LD V VN VGV+LNTAS LL+ V+GL A IVA R+ Sbjct: 480 GVGQYQHDVDQIALKRSLDDTVVSSVNGVGVELNTASKQLLSYVSGLNATTAAAIVARRN 539 Query: 526 ENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQ 585 E+G F++R +L +V RLGPKAFEQ AGFLRI H +PLDAS VHPE Y +VE++ A Sbjct: 540 EHGPFKSRAELKEVPRLGPKAFEQAAGFLRIRHATHPLDASAVHPERYALVEKMAADLGA 599 Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 + DLM LK + G+PT+ DI+ EL KPGRDPR +F+ F V Sbjct: 600 TVADLMREGKLRAKLKLEAYVTADVGLPTLNDIMAELAKPGRDPREKFEAFAFDANVHEP 659 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 DL+PGM L G VTNVT FGAFVDIGVHQDGLVHIS L++ FV+D TVVK V V V Sbjct: 660 KDLKPGMKLPGIVTNVTAFGAFVDIGVHQDGLVHISQLADTFVKDAATVVKPQQKVTVTV 719 Query: 706 LEVDLQRKRIALTMRLDEQPGETNARRGG 734 +EVDL R RIAL+MR + + G + G Sbjct: 720 VEVDLARNRIALSMRSNPEIGPRPSSGPG 748 >UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6S4_NATTJ Length = 727 Score = 757 bits (1954), Expect = 0.0, Method: Composition-based stats. Identities = 306/731 (41%), Positives = 439/731 (60%), Gaps = 22/731 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDE-GNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ + ++ E +V A+ L+ E GNTVPF+ARYRK TG L + +LR++ R Sbjct: 1 MDQKILKQVSQEENFPESKVAKAINLIKEAGNTVPFVARYRKNETGNLSEDELRSIVERW 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 YL L++R+ I+ ++ ++ KLT +L +AI + + ELE+LY PYK K++TRG A E Sbjct: 61 DYLVNLQDRKAEIIATLEKREKLTPELKEAIQKSETMQELEELYKPYKQKKKTRGMKAKE 120 Query: 121 AGLEPLADLLWSDP---SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALL 177 GLEPLA+ L E A+ ++ ++GV T AL GA+ I+ E+ +E Sbjct: 121 KGLEPLANKLRQGELKTEAEAESTASDFIDDEQGVNSTDEALQGAQDIIAEQISETVDNR 180 Query: 178 AKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 V++ +L + + ++E ++DY+D+ E L +P HRA+A+ RG EGVL++ Sbjct: 181 RDVKEIAAPETYLETQLKDQAQDENKVYQDYYDYRENLKKMPLHRAMAINRGEKEGVLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 SL+ P+E +++ + L N + V + ++ ++ EL Sbjct: 241 SLS-------SPEERIIDKVALRELVSLENAGFSRELVFEAVKDACKRLIIPSIQRELRT 293 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTI 357 + E+AE+ AI +F++NL LLM P + MG+DP ++G K+AVVD G + D I Sbjct: 294 SKTEQAEEHAIKIFSQNLERLLMQPPIKGKNVMGIDPAYKSGCKIAVVDYKGDMQEVDVI 353 Query: 358 YPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFP-KVTAQKVI 414 YP + +AA V +L K+ VE++AIGNGTASRETE F + + + Q I Sbjct: 354 YPTPPFNKTEQAAKKVISLLNKYQVEIIAIGNGTASRETEEFVSETIEDVELSLEVQYAI 413 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 VSE GASVYSAS+LAA+EFP+LDV R A+SIARR+ DPLAELVKIDPKSIGVGQYQHDV Sbjct: 414 VSEDGASVYSASKLAAEEFPELDVQERSAISIARRVIDPLAELVKIDPKSIGVGQYQHDV 473 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 Q++L + VVE VN VGVD+NTASV LL ++GL + A+N+V R E G F +R Sbjct: 474 PQSKLKEAVQFVVEKVVNQVGVDVNTASVHLLRYISGLNKKSAENMVNTRSELGGFDSRA 533 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL---- 590 QL +V LG K FEQCAGFLRI G NPLD + +HPE+Y + E I+A + +++ Sbjct: 534 QLTEVKGLGAKTFEQCAGFLRILDGSNPLDKTAIHPESYHIAEGIIAHLNEVPENIGSEA 593 Query: 591 --MGNSSELRNLKASDFTDEKFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 G S L N ++F T+ DI+ L+KP DPR EF + V + Sbjct: 594 LRTGVDSLLNNKNQIQSLCQEFDTDKYTLEDILTGLKKPLYDPREEFDKPRLKKDVMKLE 653 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL GMILEG + NV +FGAFVD+G+ +DGL+HIS+LS KFV+ P +V GD+V+V+++ Sbjct: 654 DLSEGMILEGEIRNVVDFGAFVDLGIKEDGLIHISNLSEKFVKHPMEIVSVGDVVQVEIV 713 Query: 707 EVDLQRKRIAL 717 +D R RI L Sbjct: 714 SIDKDRGRIGL 724 >UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacteriaceae RepID=C2M5J9_CAPGI Length = 723 Score = 752 bits (1942), Expect = 0.0, Method: Composition-based stats. Identities = 314/717 (43%), Positives = 443/717 (61%), Gaps = 19/717 (2%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 + I ++ + ++ + LL EG T+PFIARYRK+ TG LD+ + + + + Sbjct: 20 IQFIKAQVSTTEKAIENTLTLLSEGCTIPFIARYRKDRTGNLDEVAIEKIAKAQADYENI 79 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 +R++ IL S+ EQGKLT++L K I A+ TELEDLYLPYK KR+T+G +A E GLEPL Sbjct: 80 CKRKETILSSVEEQGKLTEELRKRIEASYELTELEDLYLPYKKKRKTKGDVAKENGLEPL 139 Query: 127 ADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWK 186 A L S E A +Y+ VA + AL GA I+ E E+ + +R + Sbjct: 140 AKQLMSQRVTDMEQLALRYLS--DKVATVEDALQGASDIIAEWINENMYVRRTLRRVFQR 197 Query: 187 NAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 A L + V GKE EE K+ YFD EPLS PSHR LAM R EG ++L + + + Sbjct: 198 KAQLCTEVAKGKENDEEAQKYAQYFDWSEPLSKAPSHRVLAMLRAEKEGFVRLKVQVETE 257 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 P E + N + K + +++ + + E + V+++A+ Sbjct: 258 DTLPFIEETIIK----------GNGQTADFLKKAIKDSYKRLLEPSISNETLQEVKDKAD 307 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ- 363 +AI VF+ NL LL+++P G + + +DPG RTG KV +D G L+ +TI+PH Q Sbjct: 308 AKAIEVFSDNLSQLLLSSPLGEKRILAIDPGFRTGCKVVCLDEKGDLLHNETIFPHAPQH 367 Query: 364 -AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 A A + + E++ +E ++IGNGTASRETERF ++ P Q +VSEAGASV Sbjct: 368 ETAMAMKKIRTMVEQYRIEAISIGNGTASRETERFIKEISFPHP---LQVFVVSEAGASV 424 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS++A +EFP DV++RGAVSI RRL DPLAELVKI+PKSIGVGQYQHDV+QT L ++ Sbjct: 425 YSASKIAREEFPTYDVTVRGAVSIGRRLSDPLAELVKIEPKSIGVGQYQHDVNQTLLEQE 484 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LDA V CVN VGV+LNTAS LL+ V+G+ MA+NIVA+R NG F+ R+ L KV RL Sbjct: 485 LDATVIRCVNKVGVNLNTASGSLLSYVSGIGEKMAENIVAYRSTNGAFRRREDLKKVPRL 544 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K ++Q FLR+++ +NPLD S VHPEAYP+++++ +++ L+GN + + Sbjct: 545 GDKVYQQAVAFLRVHNSENPLDNSAVHPEAYPIIKQMAKDLGISVEKLIGNKQAISTIDI 604 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 + +E+ G + D++KELEKPG DPR K +F V+T +D++ GMIL G V N+T Sbjct: 605 KKYKNEEVGELYLKDVLKELEKPGLDPRKTAKVFEFDPNVKTFDDVRVGMILPGIVNNIT 664 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 FG FVDIG+ + GLVHIS L + +V + VVK + V+VKV EVD RKRI+L+M Sbjct: 665 AFGCFVDIGIKESGLVHISQLKDGYVSEVSEVVKLHEQVQVKVTEVDTARKRISLSM 721 >UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellaceae RepID=A5WHC1_PSYWF Length = 849 Score = 751 bits (1938), Expect = 0.0, Method: Composition-based stats. Identities = 357/780 (45%), Positives = 483/780 (61%), Gaps = 31/780 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + +A E+ +P QVDA V+L DEG TVPFIARYRKE T GLDD+QLR LE L+Y R Sbjct: 38 NIHNKLAKELGIKPAQVDAFVKLYDEGATVPFIARYRKEKTQGLDDSQLRALEKGLNYER 97 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ++ RR IL+ + QG LT+ L I SK ELED+YLPY+P+RR+ A AGL+ Sbjct: 98 DMASRRAKILELLQSQGNLTEALQSRIEQATSKLELEDIYLPYRPRRRSLAAKARAAGLD 157 Query: 125 PLADLLWSDPSHTPEVAAAQYVY----------ADKGVADTKAALDGARYILMERFAEDA 174 +A L ++ + + + D +DT+ L G I+++ + ++ Sbjct: 158 KVAKTLLNNEVTPLDALSDYSLPETITDDTGAEIDVDFSDTEKQLAGVEAIIIDGWTQEL 217 Query: 175 ALLAKVRDYLWKNAHLVSTVVSG-KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 LL +R K A + S++ S K E G KF DYF+H E L+ +P+HR LAM RGR E Sbjct: 218 ELLDNLRSGFAKTATINSSLASDEKREVGEKFADYFEHSESLARLPNHRLLAMLRGRQEN 277 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 VL L ++ + + +++I + + W+ K HLE Sbjct: 278 VLVLKVDGED-------APFVDKVINKFELENTKPQERHDFLITAANSLWKDKWRPHLEH 330 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV- 352 L+ R AE +AI+VFA NL LLMAAPAG + +G+DPG+R GVK+AV+DA G+++ Sbjct: 331 RLLTEKRLAAEADAIDVFASNLQHLLMAAPAGRKVILGVDPGIRHGVKMAVIDAQGQVMQ 390 Query: 353 ------ATDTIYPHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ 404 A T+YP +A T+A L + H VELVAIGNGTASRET+ ++ + Sbjct: 391 DGEGKPAIATVYPFAPDNKMDEAKATIAQLLKDHQVELVAIGNGTASRETDAMIKELIEA 450 Query: 405 FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKS 464 +TA+ V+V+E+GASVYSASELA+ E DLDVS+RGAVSIARRLQDPL+ELVK++PK+ Sbjct: 451 DETITAKAVVVNESGASVYSASELASDELADLDVSIRGAVSIARRLQDPLSELVKVEPKA 510 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWR 524 IGVGQYQHDV+Q QL+ LD V +DCVNAVGVD+NTAS +L +AGL R +AQ IV +R Sbjct: 511 IGVGQYQHDVNQAQLSDSLDKVTQDCVNAVGVDVNTASPAILAHIAGLNRNVAQQIVNYR 570 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ 584 E+G F NR+QL V RLG K FEQ AGFLRI G+ PLDA+ VHPE+Y +V+ +L + Sbjct: 571 KEHGAFTNREQLKDVPRLGVKTFEQAAGFLRIRDGEEPLDATGVHPESYDLVKALLDKSG 630 Query: 585 QALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVET 644 +++ D++GN S + L ++ I +EL KP DPRPEFKTAQF D V + Sbjct: 631 KSIADVLGNDSLINTLSTDGIDAANDDNISIAAIKQELAKPAHDPRPEFKTAQFRDDVNS 690 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++DL+ GM LEG VTNVT FG FVD+GVHQDGLVHIS ++N FVEDP +VK GDIV V+ Sbjct: 691 VSDLEEGMQLEGVVTNVTGFGCFVDVGVHQDGLVHISEMANDFVEDPMNLVKPGDIVSVR 750 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNA----RRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 V+ +D +R RI +M+ ++ A R N +PA + A+PA +A Sbjct: 751 VISIDAKRNRIGFSMKSEDAASAKRATSPQRSTDKNAENAATKPAKARKNSRAKPANKAA 810 >UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular organisms RepID=YDCI_BACSU Length = 719 Score = 741 bits (1913), Expect = 0.0, Method: Composition-based stats. Identities = 305/720 (42%), Positives = 448/720 (62%), Gaps = 19/720 (2%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + IA EI + V++ +RLL++GNTVPFIARYRKE TG +D+ Q++ + R Y++ L Sbjct: 9 QQIAKEIGLSQKHVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQTISERWQYIQNLN 68 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 +R++ +++ I+EQ KLTD+L + I ++ E+EDLY PYK KR+T+ +A GLEPLA Sbjct: 69 QRKEEVIRLIAEQDKLTDNLKRKIEQSVKLQEVEDLYRPYKQKRKTKATVAKSKGLEPLA 128 Query: 128 DLLWSDPSHTPEVA-AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWK 186 D + + P A A QY+ +K V + A++GA++I+ E+ +++ +R +K Sbjct: 129 DYILTLPQDDHLAATADQYISEEKEVFTREEAIEGAKHIIAEQISDEPTFRKWIRQETFK 188 Query: 187 NAHLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + S S +E + Y+++ EP++ V HR LAM RG E +L++++ Sbjct: 189 RGTIKSAAGKSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVAIEPPADH 248 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 ++Y E+ I+ + + + + +++ + +E E+ + E+A++ Sbjct: 249 I----KAYLEKQIIKNRSTSVREILQE-----TIEDSYKRLIQPAIEREIRKELSEKADE 299 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--Q 363 +AI++F+ NL LL+ P + +G+DP RTG K+AV D TGK++ D IYPH + Sbjct: 300 QAIHIFSENLRKLLLQPPMKGKTVLGVDPAFRTGCKLAVSDETGKVLKIDVIYPHAPVNK 359 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 +A V + E++ VE+VAIGNGTASRETE+F ++V + P+ VIV+EAGASVY Sbjct: 360 TKEAHEKVKKILEQYQVEMVAIGNGTASRETEQFIVNVLRDMPR-KIYYVIVNEAGASVY 418 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SASELA +EFPDL V R AVSIARRLQDPLAELVKIDPKS+GVGQYQHDVSQ +L L Sbjct: 419 SASELAREEFPDLKVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESL 478 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVE VN VGV++NTAS LL VAGL++ +A N+V R+E G+F NR++L + RLG Sbjct: 479 RFVVETVVNQVGVNVNTASAALLQYVAGLSKSVAGNVVKKREEIGKFSNRKELKDIPRLG 538 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 K +EQC GFLR+ G PLD + +HPE+Y + +L + + +G + + Sbjct: 539 AKTYEQCIGFLRVQEGTEPLDRTGIHPESYKETKALLKKLGLS-TEHIGTAELKDKINQL 597 Query: 604 DFTDEK----FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 ++ G T+ DI ++L +P RDPR + V + DL+ GM L+G V Sbjct: 598 ALSETAKELGIGEITLKDICEQLTRPERDPRDKVPKPLLKTDVLQLEDLKEGMELQGTVR 657 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 NV +FGAFVDIGV QDGLVHIS LSN+FV+ P VV GDIV V V VD+Q+ R++L+M Sbjct: 658 NVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVDGVDVQKGRVSLSM 717 >UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP5_9FIRM Length = 749 Score = 739 bits (1908), Expect = 0.0, Method: Composition-based stats. Identities = 294/768 (38%), Positives = 437/768 (56%), Gaps = 31/768 (4%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ + IA E+ + +QV+ + LL EGNTVPFIARYRKE T GLD+ Q+ + Sbjct: 1 MNEQIIQNIAKELNIQLDQVEHTLSLLQEGNTVPFIARYRKEATKGLDEEQILFIRKHFD 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y +L ER++A+LK I+EQGKLT +L K + A +++ED+Y PY K++TR A++ Sbjct: 61 YQNKLAERKEAVLKLIAEQGKLTPELEKEVQACEKLSQVEDIYRPYAQKKKTRATEAVKK 120 Query: 122 GLEPLADLLWSDP-SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+PLAD L P + E A ++V + V + + AL GAR I+ E ++ A + Sbjct: 121 GLQPLADWLLGLPIEGSIEEMAEKFV--NDQVTNVEEALQGARDIIAEFVSDKAKQRWRF 178 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 ++++ + + + + ++E + Y+D E ++ V HR +A+ R E V+ +SL Sbjct: 179 KEFILTSGQIQTKLKKDAQDEKHTYEMYYDRIEKINHVADHRIMAIDRAEKEKVITVSLV 238 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 D + E + +L A D + +E E+ + Sbjct: 239 YDKEHLEQEALEELLKGEKTIAQEQLAFASKD---------GCERLLFPSIEREIRSDLS 289 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERA+ ++I +F+ NL LL AP R +G DPG G K+AV+D TGK++A I+P Sbjct: 290 ERAQGKSIEIFSMNLEKLLSQAPLKGRVVLGFDPGFFNGCKLAVIDETGKMLAVQKIFPF 349 Query: 361 TGQAAK---AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 + + + + + L +++ V++VAIGNGTASRE+E+ DV ++ ++ IVSE Sbjct: 350 SKKGEELEVSKKKLWQLIQRYQVQIVAIGNGTASRESEKLVADVIRE-NQLDISYAIVSE 408 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGASV+SA E A EFPDL V R AVSI RRL DPLAEL+KIDP+SIGVGQYQHD+ Q Sbjct: 409 AGASVWSAQEEARAEFPDLAVEERSAVSIGRRLLDPLAELIKIDPQSIGVGQYQHDLPQK 468 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 +L +L+ VN G DLNTAS LLT ++GL +AQ IV +R+ENG+F NR QLL Sbjct: 469 KLTERLEEATMKVVNRTGADLNTASKELLTHISGLNAGIAQEIVKYRNENGRFTNRNQLL 528 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAA---TQQALKDLMGNS 594 KV +LGPKA+ Q AGFLRI G+ PLD +++HPE+Y +++ A TQ K++ + Sbjct: 529 KVKKLGPKAYTQSAGFLRIKGGEEPLDQTSIHPESYEAARQVMEAYGITQLGQKEVTMDG 588 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 S+ + L + T+ DI + + +P RD R +F A V ++ DL G L Sbjct: 589 SKDQLLGIDAY--------TLKDIKEAIRQPLRDYRDQFDGALLKSDVLSLEDLHVGDQL 640 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G V NV +FGAF+DIG+H+DGL HIS ++ K P ++ GDIV V V E+D+ R R Sbjct: 641 SGTVRNVVDFGAFIDIGLHEDGLAHISHMAMKKFNHPSEILSVGDIVTVWVYEIDINRNR 700 Query: 715 IALTM----RLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 + L++ +L E+ + R+ N + + R G Sbjct: 701 VQLSLLPLEKLKEREAQVKYRKSAKNRKSKKKITMEDALSRLTARFGK 748 >UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacilli RepID=B1MZ34_LEUCK Length = 733 Score = 735 bits (1898), Expect = 0.0, Method: Composition-based stats. Identities = 302/735 (41%), Positives = 422/735 (57%), Gaps = 26/735 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + + + +A + +Q A + LL +G TVPFI+RYRKE+TGGLD+ Q+ +++ Sbjct: 12 ITDTDLAKQVAEHLTIGVKQTTATLELLRDGATVPFISRYRKEMTGGLDEVQIHDVQVTA 71 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 ++++L +R++ +LK+I+ Q KLT L AI + ++EDLYLPYK K+RT+ IA E Sbjct: 72 RHIKDLTDRKKTVLKAIATQQKLTATLQAAIITAATLQDVEDLYLPYKQKKRTKAMIARE 131 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+PLAD + + S A Y + +AD A L G I+ E+ E A + Sbjct: 132 NGLQPLADFVLTHLSEEIPTEA----YINDALADAAAVLAGLHEIIAEQIGEKAIYRQWL 187 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAK--FRDYFDHHEPLSTVP--SHRALAMFRGRNEGVLQ 236 R+ + ++ L TV EE+ A+ + Y+D+ E L ++ + R LA+ RG +GVL Sbjct: 188 RERMQRDGFLTVTVKRDGEEKDAQGVYAQYYDYSESLKSLQMNTFRILAVNRGEKDGVLS 247 Query: 237 LSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELM 296 + ++ + I + + ++ + ++ + + EL Sbjct: 248 VKIDFSEERMRHF-------IQIKERNGQGDSGEGYQVLLSAIDDAYKRFIQPAVARELR 300 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + A+ +AI VF NL+ LLM AP + MG DPG RTG K+A++DA G+ + + Sbjct: 301 QELTVLAQGQAIKVFGDNLYHLLMQAPLKNKIVMGFDPGFRTGSKLAIIDANGRFLKKEV 360 Query: 357 IYPHTG----QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 IYPH Q +AA +L + +V LVAIGNGTASRE++ F + Q Sbjct: 361 IYPHKPASEKQRQEAAKRFQSLIHEFDVALVAIGNGTASRESQEFVANNL----PSGVQY 416 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 IV+EAGASVYSASE A EFP L V R A+SI RR+QDPLAEL+KIDPKS+GVGQYQH Sbjct: 417 SIVNEAGASVYSASEEARSEFPQLHVEERSAISIGRRIQDPLAELIKIDPKSVGVGQYQH 476 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 D++ L ++ VVE VN VGV+LNTAS PLLT +AGL +AQNIV +RD NG F + Sbjct: 477 DLNTKMLDEQVGQVVEKAVNQVGVNLNTASTPLLTHIAGLNTTLAQNIVDYRDNNGVFTS 536 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQA---LKD 589 R L K+ RLGPKA+EQ AGFLRI G N LD + +HPE+Y +++L L Sbjct: 537 RIDLKKIPRLGPKAYEQAAGFLRILDGKNILDNTDIHPESYAAAKKLLDLADITAQQLAT 596 Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 N R G+ T+ DI+ L+KPGRD R E A V + DLQ Sbjct: 597 APANERLTRYDNQMTANQLGIGIETLHDIVGSLKKPGRDGRSEMVGALLKSDVLHIEDLQ 656 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 PGM L+G V NV +FGAFVD+GV DGLVHIS L + V+ P +V GDIV V V+EVD Sbjct: 657 PGMKLQGTVRNVVDFGAFVDLGVKHDGLVHISRLVKRRVKHPSEIVSVGDIVNVWVVEVD 716 Query: 710 LQRKRIALTMRLDEQ 724 +R+RI LTM E+ Sbjct: 717 QKRQRIGLTMIAPEE 731 >UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobacterium RepID=C4L139_EXISA Length = 709 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 298/720 (41%), Positives = 426/720 (59%), Gaps = 23/720 (3%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +A + + QV+ +L EG T+PF+ARYRKE+TG LD+ +++ + L Y Sbjct: 1 MITKVANALNLKVNQVETVQQLASEGATIPFMARYRKEMTGNLDEVEIKGILDALQYEES 60 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L++R+ +L + E K T +L KA+ A + ++ED+YLPY+PKRRT+ + E GL+P Sbjct: 61 LQKRKADVLAKLEELEKNTPELTKALEAATTLQQVEDIYLPYRPKRRTKAEQGREKGLQP 120 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LAD W + + + D + + AL I+ E + E+A L +RD + Sbjct: 121 LAD--WFRDKSPYSLDEVKELSQD---VEVEEALPLVHAIIGEEWGEEAKLRQMLRDRVR 175 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K L S E+E F Y+++ E ++ + HR LA+ RG VLQ+ + D Sbjct: 176 KEGLLRSKKKKQAEDEKEIFAQYYEYEEKIAGIVPHRVLALNRGERTDVLQVKVVFDESR 235 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 E++ + + + V+ ++ V +E E+ G + E+AE+ Sbjct: 236 FMDQALRTYERLPKEKREV----------VEAAVTEAYKKSVFPAIEREIRGELTEKAEE 285 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ-- 363 +AI+VF++NL L M P +G+DP RTG K AVV+ GK+ YP + Sbjct: 286 QAIDVFSKNLKQLYMQPPLREVVVLGIDPAYRTGCKWAVVNEIGKVEEVGVFYPTAPKHD 345 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A A + L +K+ + ++ +GNGTASRETE+F D K+ + IV+EAGASVY Sbjct: 346 IAGAEKVLTRLAKKYPISVIVVGNGTASRETEQFVADWLKKAER-DIAYAIVNEAGASVY 404 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SASE+A EFPDL V R AVSIARR+QD +AELVK+DP+S+GVGQYQHDVSQ +L L Sbjct: 405 SASEVARSEFPDLKVEERSAVSIARRIQDAMAELVKVDPQSVGVGQYQHDVSQNKLKASL 464 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 + VVE VN VG+D+N AS LLT V+GL + A+NIVA+R+ENG+F+ R+++ KV RLG Sbjct: 465 EFVVESVVNMVGIDVNRASESLLTYVSGLNKTTAKNIVAYREENGRFETRKEIKKVPRLG 524 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 KAFEQ AGFLRI +G + LD + +HPE+YP+ IL + K +G ++ L+ Sbjct: 525 AKAFEQAAGFLRIMNGKDVLDQTEIHPESYPLALSILKEIGSS-KSEVGTAALRERLQQV 583 Query: 604 DFT----DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 D + G+PTV DI+K L KPGRDPR + + V ++ DLQ GM +G V Sbjct: 584 DAKALSEQLEAGLPTVEDILKSLAKPGRDPREDIQKPLLRTDVMSLEDLQVGMEFQGTVR 643 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 NV +FGAFVDIGV QDGLVHIS LSN++V+ P VV GDIV V + +VD+ R RI+LTM Sbjct: 644 NVIDFGAFVDIGVKQDGLVHISKLSNRYVKHPLDVVAVGDIVTVWIEQVDVNRGRISLTM 703 >UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacteriaceae RepID=D1AUZ7_STRM9 Length = 762 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 293/730 (40%), Positives = 452/730 (61%), Gaps = 19/730 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M + + ++ E+ +Q++ ++L DEG T+PFI+RYRKE+TG LD+ Q+R++ +++ Sbjct: 1 MENKIFKYVSKELNIGLKQIEETMKLYDEGATIPFISRYRKEVTGNLDEEQIRDVVEKIT 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y R LE+R++ +++ I EQG LT +L K+IN +EDLY+PYK K++T+ IAIE Sbjct: 61 YYRNLEKRKEEVIRLIEEQGALTPELEKSINEATVLQRVEDLYMPYKKKKKTKADIAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + + Y + + + AL+G I ++ +E+ +R Sbjct: 121 GLEPLAIFAKDEKITIDILKEEANKYINDNILSVEDALEGVHLIHAQKISEEITNREYLR 180 Query: 182 DYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 + L + + +VS ++ + +E ++DY++ E S + +HR LA+ RG NE +L+++L Sbjct: 181 NLLSQKSLVVSKLIEKNKGLDEKQVYKDYYNFQEAYSKIVTHRILAINRGENEKILKVNL 240 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 D ++ E+++ + N S+ +V+ + + +E EL + Sbjct: 241 EID--------DNVREELVNKMYHMNFKNDNLKSFFIDIVNDSIDRLMYPSIENELRNIL 292 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 E+AE EAI FA NL LL+ P + +GLDPG RTG K+A++D G +D +Y Sbjct: 293 TEKAELEAIENFATNLEKLLLQPPLNKKTILGLDPGYRTGAKLAIIDKDGFFKESDVVYL 352 Query: 360 -----HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 Q A + K++V++VAIGNGTASRETE F + K++ + +I Sbjct: 353 VKEMHSEKQLETARNKILKYLSKYDVDIVAIGNGTASRETESFVAALLKEYKEKKVSYII 412 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+EAGASVYSAS++AA EFP+LDV++RG +SI+RRLQDPLAELVKIDPKSIGVG YQHDV Sbjct: 413 VNEAGASVYSASKVAADEFPELDVTVRGTISISRRLQDPLAELVKIDPKSIGVGMYQHDV 472 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +Q +L +L+ +E VN VGV++NTAS LL+ V+G+ + +A+NIV +R ENG F+NR+ Sbjct: 473 NQKKLNEELEQTIEKIVNRVGVNINTASAELLSFVSGIKKNIAKNIVEYRKENGDFKNRK 532 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 ++LKV LG KAFEQ AGF+ I +G+NPLD + +HPE+Y + E IL+++ + +L + Sbjct: 533 EILKVKGLGAKAFEQLAGFVVIPNGENPLDNTIIHPESYHIAEEILSSSSTNVNELKTDL 592 Query: 595 SELRN----LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 +R + + ++ T D+ + L K RDPR EF + + ++ DL+ Sbjct: 593 ELVREKLKLVNLQNIIEKTGLDKTTKDVYEALIKDRRDPRDEFDKPLLREDILSIEDLKV 652 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM LEG V NVT FGAFVDIG+ D ++HIS LSN F++DP V+ G I+KV+VL++D+ Sbjct: 653 GMELEGTVRNVTKFGAFVDIGLKNDAMIHISELSNSFIDDPTKVLSIGQIIKVRVLDIDI 712 Query: 711 QRKRIALTMR 720 QR R+ LT + Sbjct: 713 QRGRVGLTRK 722 >UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ4_9BACT Length = 706 Score = 727 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 301/723 (41%), Positives = 421/723 (58%), Gaps = 20/723 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M + E + ++ + L GNTVPFIARYRKE+TG +D +RN+ R Sbjct: 1 MQEKLF----TEFSFQRNHINNVIDLHLSGNTVPFIARYRKEMTGNMDAEDIRNIIERYE 56 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YL LE+R+Q ++++I E+GKLTD+L K+I + E+EDLY PYK K++T+ +A EA Sbjct: 57 YLENLEKRKQEVIEAIDERGKLTDELKKSIMKAETMKEVEDLYAPYKSKKKTKADLAREA 116 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + ++ A A+ D V D A+ A I+ E D + A++R Sbjct: 117 GLEPLAVYIRANADLGGLSAEAEKFVCD-AVPDADTAVSMASDIVTEEIGHDPEIKARLR 175 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + N + S++ +E + DY+D + + VP HR LAMFRG E +L+L + Sbjct: 176 ELYELNGEI-SSIQKTDSKERNPYEDYYDFRQKMRDVPPHRVLAMFRGEREKILKLKIEI 234 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 D C G+ N S R+ ++ + + LE E G ++E Sbjct: 235 DEDMCLNAIAKICA-----GKGMEDNEITKKSMRQ-----AFKKMLELSLELEFRGELKE 284 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 + E +AI+VFA NL +LL+ R MG+DP RTG K AVVD TG L+ +YP Sbjct: 285 KGEIKAISVFAENLKNLLLTPTVRNRVIMGIDPAFRTGCKFAVVDTTGDLLDYGVMYPTK 344 Query: 362 GQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 QA K+ + K++V +AIGNGTASRETE F V + ++ Q IVSEAG Sbjct: 345 PQADYQKSRSIMLESIRKNSVNAIAIGNGTASRETEEFVASVISE-DELDIQYTIVSEAG 403 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSA +A +EFP+LDVS+RGA+SIARR+ DPLAELVKIDPKSIGVG YQHDV+ +L Sbjct: 404 ASVYSAGAVAKREFPELDVSIRGAISIARRVLDPLAELVKIDPKSIGVGMYQHDVTGKKL 463 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 + L VVED VN VGVDLNTAS LL+ V+GL+ +A+ IV R G+F++R++L+KV Sbjct: 464 EKSLTDVVEDVVNNVGVDLNTASPSLLSYVSGLSDSLAEKIVKHRQSIGRFKSRKELMKV 523 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +G F Q AGFL++ G LD+ +HPE+Y V L A + +++ Sbjct: 524 DGVGELTFRQSAGFLKVYGGGEKLDSMFIHPESYDAVYAFLEAVNLSSDKCELVKLAVKD 583 Query: 600 LKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 ++ G T+ DII LEKP RD R F G+ ++ L+ G +L G V Sbjct: 584 KNVKSLAEKLGIGEFTIKDIIDNLEKPDRDIRDNVDPVVFKQGILSIESLKEGDVLTGKV 643 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 +NV +FGAFVD+G+ DGLVHIS L+++FV DP VVK G VK KVL VD +R R++L+ Sbjct: 644 SNVVDFGAFVDVGLKNDGLVHISQLADRFVSDPSEVVKVGQTVKTKVLSVDRERGRLSLS 703 Query: 719 MRL 721 M++ Sbjct: 704 MKV 706 >UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococcus RepID=C7RH14_ANAPD Length = 699 Score = 722 bits (1864), Expect = 0.0, Method: Composition-based stats. Identities = 290/720 (40%), Positives = 430/720 (59%), Gaps = 31/720 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I++ +++ + ++A +LLDEG+TV FIARYRKE TG L D ++R +E L+ R Sbjct: 2 NITEILSKQLEISEKGIEAVTKLLDEGSTVAFIARYRKEATGNLTDVEIREIEKNLNKYR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +E+R++ I+ SI QGKLT++L + I +T + T LED+Y PYK KR+TR IA E GL+ Sbjct: 62 NIEKRQEEIINSIESQGKLTEELKEEILSTNTLTILEDIYAPYKSKRKTRADIAREFGLD 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L D L++ + E Y +G+ + ALD A IL E + +R Sbjct: 122 KLLDFLFTKAENEGEALDEASKYLVEGLESEEEALDRALDILAEDISNSIPARNIIRRDG 181 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 + A L ++ KE+E + +Y+D + L + S + LA+ RG E L + L + Sbjct: 182 FLRAKLTCSL---KEDEAGLYENYYDFSKKLRDMKSFQTLAINRGEKEKALTVKLEFTDE 238 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAP-ADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 Y +++I D + P +S V+ ++ +L + TE+ + E A Sbjct: 239 --------YNKKLIADLFREDKDFNPYQESLLVKTVNDAYKRLMLPSITTEMRNFLTESA 290 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 EDE+I+VF +NL L+ P +A +GLDPG RTG KVAVVD GK + + IYP Sbjct: 291 EDESISVFGKNLKPYLLQRPIKGQAVIGLDPGFRTGCKVAVVDQFGKYLDSTVIYPVEPH 350 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + +A T+ L +K++V L+A+GN TASRETE + ++ ++ IV+EAGAS Sbjct: 351 KKEKEAIATLKRLVKKYDVSLIALGNATASRETELVVNKLIQEVDGLS--YAIVNEAGAS 408 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IG+GQYQHD+ +L Sbjct: 409 VYSASTLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGIGQYQHDLDGKKLDE 468 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 +L VVED VN VGV +N AS LL+ V+GL +A+ I E G+ R+ L V Sbjct: 469 ELSKVVEDAVNEVGVSINNASYKLLSYVSGLNANLAKRIEEDFKE-GKIVYRKDLKSVKG 527 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG K ++ CAGFLR LD + VHPE+Y + +++ +L ++ Sbjct: 528 LGDKTYKLCAGFLRFPDSPELLDNTAVHPESYKIAKKL-------------EGEDLDSIN 574 Query: 602 ASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 ++ + GVPT+ DII EL+KPGRDPR + V ++DL+ GMIL+G V N Sbjct: 575 LESLAEKLEVGVPTLEDIISELKKPGRDPRDDNPEVLTRKEVMGIDDLKEGMILKGKVRN 634 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +T+FGAFVDIGV DGLVH+S +SNKF+++P+ V+ +V+VKV+E+D +++RI L+M+ Sbjct: 635 ITDFGAFVDIGVGIDGLVHVSKISNKFIKNPNEVLTNSQVVEVKVIEIDRKKERIGLSMK 694 >UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2BIJ8_9FIRM Length = 697 Score = 721 bits (1861), Expect = 0.0, Method: Composition-based stats. Identities = 289/721 (40%), Positives = 421/721 (58%), Gaps = 29/721 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 I++ E+ E+++ ++LLDEG+TV FIARYRKE+TG L D ++R +E L LR Sbjct: 2 KIIEILSKELNINEERIENVIKLLDEGSTVAFIARYRKEVTGNLTDVEIREIEKNLGRLR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +E+R++ I+K I E+G+LTD+L + I A+ S T LED+Y PYK +R+TR IA E GLE Sbjct: 62 NIEKRQEEIIKLIDEKGQLTDELREEILASNSLTILEDIYAPYKSRRKTRADIARELGLE 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L ++ S E A Y +G+ D K + + IL E A +R Sbjct: 122 EFLTKLLTEISSEDEALQAAVSYIKEGLEDEKDVISRSLDILAEDIANTIDARNIIRRDG 181 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 + A L++++ + EE + + Y D + L + S + LA+ R E +L + + + Sbjct: 182 FLRASLITSLKA---EEDSSYESYHDFSKKLKDLKSFQILAINRAEKEDILNVKI----E 234 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 F + +S +++ D N + ++ ++ + TEL + E A Sbjct: 235 FSDAYNKSLIYKLVSDGKNF---NPYQKELVNLTIDDAYKRLMVPSITTELRNKLTEEAS 291 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG-- 362 DE+I VF NL L+ P + MGLDPG RTG KVAVVD GK + IYP Sbjct: 292 DESIRVFGNNLKPYLLQRPLKGQVVMGLDPGFRTGCKVAVVDKNGKYLDQAVIYPVEPHK 351 Query: 363 QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + +A T+ AL +K+ V L+A+GN TASRETE + K+ V+ IV+EAGASV Sbjct: 352 KEKEAIATLKALIKKYGVTLIALGNATASRETELVVDKLIKEVDGVS--YAIVNEAGASV 409 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IGVGQYQHD+ +L + Sbjct: 410 YSASSLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGVGQYQHDLDSKKLDEE 469 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L VVED VN VGV +N AS LL+ V+GL + +A+ I E G+ R+ LL V L Sbjct: 470 LSKVVEDAVNEVGVAINNASYKLLSYVSGLNQNLAKRIEEDFKE-GKLVYRKDLLDVKGL 528 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K +E AGFLR LD + VHPE+Y + ++I +L + Sbjct: 529 GKKTYELAAGFLRFPSSPEILDNTAVHPESYKIAKKI-------------QDLDLDKIDI 575 Query: 603 SDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 +E + G+PT+ DII EL+KPGRDPR + + ++DL+ GM+L+G V N+ Sbjct: 576 EKVAEELEVGIPTLKDIIAELKKPGRDPREDNPEVLTKKEIMGIDDLKVGMVLKGKVRNI 635 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 T+FGAFVDIGV DGLVH+S +S+KFV++PH + +V V+++E+D +++RI L+MR Sbjct: 636 TDFGAFVDIGVGIDGLVHVSEISDKFVKNPHDELTNSQVVSVRIIEIDKKKERIGLSMRS 695 Query: 722 D 722 + Sbjct: 696 E 696 >UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPA5_BDEBA Length = 780 Score = 721 bits (1860), Expect = 0.0, Method: Composition-based stats. Identities = 331/776 (42%), Positives = 461/776 (59%), Gaps = 30/776 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 S+ IA + A+ Q A + L EG TVPFIARYRKE TG LD+ Q+R + Sbjct: 6 QSYLARIAPTVSAKSAQ--AVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGHETY 63 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 E+ +R+ ++K I EQ LT ++ K I + ELE++Y P+K K++T+ IA EAGL Sbjct: 64 NEIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIAREAGL 123 Query: 124 EPLADLLWS------DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALL 177 EPLA+ +W T E+ A ++ +A + AL GA+ I++E+ A DA L Sbjct: 124 EPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIATYEEALKGAQDIIVEKIANDAELR 183 Query: 178 AKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV----PSHRALAMFRGRNEG 233 A V + +V+ G + +K+ Y + EP+ + +HR LAM RG E Sbjct: 184 AMVAKNYNDSGRVVAKAAKGYKA-NSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQEE 242 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 L + + D DE +SY ++ + + K + VL + Sbjct: 243 ELTVDVKGD---DEAILKSY------ENFATSTPDNAIGDYLKQCARLALNVYVLPSVVN 293 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 E+ ++E+A+ +AI VFA N+ LL+A+P G + +G+DPGLRTG KVA++D +G ++ Sbjct: 294 EVHRQLKEKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGAFIS 353 Query: 354 TDTIYPHTGQA-AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 +Y A KA + + ++ +E +A+GNGTA RETE F V K K Sbjct: 354 HTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLKKVLKDLGK-NIPV 412 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 V+VSE+GASVYSASE+A +EFPDLDV+++GA+SIARRLQDPLAELVK+DPKSIGVGQYQH Sbjct: 413 VMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQH 472 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 DV+Q+QL + L+AVVE CVN VGVD+NTAS LL+ VAG+ +A+ IV R + F + Sbjct: 473 DVNQSQLKKSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKK-SLFND 531 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R +LLKV + K FEQ AGFLRI LD++ +HPE Y V + +L D++G Sbjct: 532 RTELLKVPKFSAKVFEQAAGFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTDVIG 591 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 ++ + S + + G T DI+KELEKPGRDPR FK QF D + + DL GM Sbjct: 592 EGAKKLVSQRSKWA-QLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLTEGM 650 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I G VTNVTNFGAFVDIGVHQDGLVHIS+LS+KFV+DP VV GD V VKVL+VD+ + Sbjct: 651 ICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVK 710 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 +I+LTM++D+ P + R ER NR A++P G+ +P + A Sbjct: 711 NQISLTMKMDDAPEASAPR----GERRPENRGASRPMGQGQRPPAGKPAQAPMKPA 762 >UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria RepID=C1CRY7_STRZT Length = 709 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 313/720 (43%), Positives = 428/720 (59%), Gaps = 23/720 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 D I+ ++ +Q+D + L EG T+PFIARYRK++TG LD+ ++ + L Sbjct: 2 DKKYEKISQDLGVTLKQIDTVLSLTAEGATIPFIARYRKDMTGSLDEVAIKAIIDLDKSL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 L +R++A+L I EQGKLT +L +AI ++E+LYLPYK KRRT+ IA EAGL Sbjct: 62 TNLNDRKEAVLAKIQEQGKLTKELEEAILVAEKLADVEELYLPYKEKRRTKATIAREAGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA L+ + E A ++V +G A K AL GA IL+E +ED L + Sbjct: 122 FPLARLILQNIVDL-EKEAEKFVC--EGFATGKEALTGAVDILVEALSEDVTLRSMTYQE 178 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + +++ L S +E F+ Y+D E + T+ +R LA+ RG GVL++ Sbjct: 179 VLRHSKLTSQAKDESLDEKQVFQIYYDFSETVGTMQGYRTLALNRGEKLGVLKIGFEHAT 238 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 I+ R +++ VV + + KVL +E + + E+A Sbjct: 239 D------------RILAFFATRFK--VKNAYIDEVVQQSVKKKVLPAIERRIRTELTEKA 284 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 E+ AI +F+ NL +LL+ AP R +G DP RTG K+AVVDATGK++ T IYP Sbjct: 285 EEGAIQLFSDNLRNLLLVAPLKGRVVLGFDPAFRTGAKLAVVDATGKMLTTQVIYPVKPA 344 Query: 363 ---QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q +A +A L ++ VE++AIGNGTASRE+E F +V K FP+V+ VIV+E+G Sbjct: 345 SARQIEEAKKDLADLIGQYGVEIIAIGNGTASRESEAFVAEVLKDFPEVS--YVIVNESG 402 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSASELA QEFPDL V R A+SIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ +L Sbjct: 403 ASVYSASELARQEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKL 462 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 + LD VV+ VN VGV++NTAS LL+ VAGL + +++NIV +R+E G+ +R Q+ KV Sbjct: 463 SESLDFVVDTVVNQVGVNVNTASPALLSHVAGLNKTISENIVKYREEEGKITSRSQIKKV 522 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 RLG KAFEQ AGFLRI N LD + VHPE Y V+ + + S Sbjct: 523 PRLGAKAFEQAAGFLRIPESSNILDNTGVHPENYAAVKELFKCLDIKDLNEEAQSKLKSL 582 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 + G T+ DII +L KPGRD R F V + DL G LEG V Sbjct: 583 SVKEMAQELDLGPETLKDIIADLLKPGRDFRDSFDAPVLRQDVLDIKDLVVGQKLEGVVR 642 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 NV +FGAFVDIG+H+DGL+HIS +S KF++ P VV GD+V V V ++D +R+++ L++ Sbjct: 643 NVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVAVGDLVSVWVKKIDTEREKVNLSL 702 >UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFG9_MYCFE Length = 722 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 262/719 (36%), Positives = 409/719 (56%), Gaps = 25/719 (3%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + +A ++ + +QV+ ++L+DEG TVPFIARYRK +TGGLD+ ++ + Y EL Sbjct: 10 KFVAQKLNLKEDQVEVVLKLMDEGATVPFIARYRKNVTGGLDEEVIQQISDMYVYNVELN 69 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 +R++AI+ + E+G LT ++ + A +K E+E++Y P+K ++T+ AI GLEPLA Sbjct: 70 KRKEAIIDILKEKGLLTPEIENKLKAAETKAEVENIYEPFKVGKKTKASEAIALGLEPLA 129 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 + + + Y + V + A++ A+YI+ + ++D V+ ++ Sbjct: 130 KAIMEATDESFDPYKEAKKYLNDKVPTVEFAIEQAQYIISQIMSQDVENREYVKKQIYDF 189 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 +V+ V E+E F+ Y+D+ E + +P+HR LA+ RG ++ +L + + Sbjct: 190 GFIVTKVKKNAEDEKEVFQQYYDYKERIKFIPNHRVLAISRGEDKKILSYDMTYN----- 244 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 +I D + + +L + E+ + RAE EA Sbjct: 245 ------LAKITYDLNNKYFKIKRTGKILNESLKDSLDRLILPSIIREIKSDLFARAEKEA 298 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AA 365 IN+FA NL +L+ + M +DP G K+A++D GK + IYP+ Q Sbjct: 299 INLFATNLETMLLWPAVKNKTVMAIDPAFVNGCKIAILDPQGKFLKKALIYPNPPQNYVD 358 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ----FPKVTAQKVIVSEAGAS 421 KA V L + + V ++ IGNGTASRETE F ++ K+ P +VSE GAS Sbjct: 359 KAKEIVNKLLDSYKVNIIVIGNGTASRETEEFIANLLKERSKVNPNEDISYAVVSEVGAS 418 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSAS++A EFPD V R AV+I RR QDPL ELVKIDPK+IGVGQYQHDV+Q L++ Sbjct: 419 VYSASKVAIDEFPDFSVEERSAVNIGRRFQDPLNELVKIDPKAIGVGQYQHDVNQKDLSK 478 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD V+ VN VGVDLN+A+ +L ++GLT+ +AQNI+ +R++ +F+ R++LLKV Sbjct: 479 ALDFKVDKVVNMVGVDLNSATKEILCYISGLTKTLAQNIIDYREKINKFKERKELLKVKG 538 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG KA+EQ GFLRI+ N D + +HPE+YP+ I+ A Q L D+ + E ++ Sbjct: 539 LGEKAYEQAVGFLRIHDSKNFYDRTAIHPESYPLAINIVNALQLDLNDIDLKTIEQQDAN 598 Query: 602 --ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 A DF ++ V I+ L P +D R + V + DL+PGMIL+G+V Sbjct: 599 KLAKDFNSNEYD---VKLILDSLSNPTKDIRDDKDGYILKKDVLKLEDLKPGMILDGSVQ 655 Query: 660 NVTNFGAFVDIGVHQDGLVHISSL---SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 N+T+FG FV IG+ Q L+HIS++ + +++ VVK GD +K+++LE+D +R+RI Sbjct: 656 NITDFGIFVYIGIKQAALIHISNMKRNKDHYIKHSSEVVKTGDNIKIQILEIDKERERI 714 >UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 Tax=Chordata RepID=SRBD1_HUMAN Length = 995 Score = 690 bits (1781), Expect = 0.0, Method: Composition-based stats. Identities = 267/790 (33%), Positives = 394/790 (49%), Gaps = 80/790 (10%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN ++++ P +RL ++ NT+PFI RYRKE+ LD LR ++ L Sbjct: 210 MNWDMVQVLSERTNIEPWVCANIIRLFNDDNTIPFIIRYRKELINNLDADSLREVQQTLE 269 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIE 120 LR + ++ + ++ I ++GK+++ L KA+ + ELE + PYK + T+ Q A + Sbjct: 270 ELRAVAKKVHSTIQKIKKEGKMSECLLKAMLNCKTFEELEHVSAPYKTGSKGTKAQRARQ 329 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAK 179 GLE A L P E++ Y+ D KG++ + G ++IL + A+D L Sbjct: 330 LGLEGAARALLEKPG---ELSLLSYIRPDVKGLSTLQDIEIGVQHILADMIAKDKDTLDF 386 Query: 180 VRDYLWKNAHLVSTV------VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 +R+ K + + E++ KF Y + + H+ LA+ RG N Sbjct: 387 IRNLCQKRHVCIQSSLAKVSSKKVNEKDVDKFLLYQHFSCNIRNIHHHQILAINRGENLK 446 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLR-LNNAPADSWRKGVVSWTWRIKVLMHLE 292 VL + +N + K+ +C I + R ++ +++ + L Sbjct: 447 VLTVKVNI----SDGVKDEFCRWCIQNRWRPRSFARPELMKILYNSLNDSFKRLIYPLLC 502 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV 352 E + AE E++ +F RNL LL+ +P R MG+DPG + G K+A++ T +++ Sbjct: 503 REFRAKLTSDAEKESVMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLAIISPTSQIL 562 Query: 353 ATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ--KQFPKVTA 410 TD +Y H GQ + A + L N V IGNGTA RETE ++ D+ F + Sbjct: 563 HTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVIGNGTACRETEAYFADLIMKNYFAPLDV 622 Query: 411 QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY 470 IVSEAGAS+YS S A +E P LD +LR AVSIARR+QDPLAELVKI+PK IGVG Y Sbjct: 623 VYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRVQDPLAELVKIEPKHIGVGMY 682 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 QHDVSQT L LD+VVE+CV+ VGVD+N S LL +AGL A+NI+ WR++NG F Sbjct: 683 QHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIAGLNANRAKNIIEWREKNGPF 742 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHG------------------------------- 559 NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 743 INREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSQQTETSGQIQGVAVTSSADVEVTN 802 Query: 560 -----------------DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK- 601 NPLD + +HPE+Y + R L++ L +G + + Sbjct: 803 EKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDIAMRFLSSIGGTL-YEVGKPEMQQKINS 861 Query: 602 -ASDFTDEKFG------VPTVTDIIKELEKP-GRDPRPEFKTAQFADGVETMNDLQPGMI 653 EK V T+ II L +P D R +F F + + DLQ G + Sbjct: 862 FLEKEGMEKIAERLQTTVHTLQVIIDGLSQPESFDFRTDFDKPDFKRSIVCLEDLQIGTV 921 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN----KFVEDPHTVVKAGDIVKVKVLEVD 709 L G V N T FG FVDIGV + GL+ I +++ K + + G+ V+V+VL +D Sbjct: 922 LTGKVENATLFGIFVDIGVGKSGLIPIRNVTEAKLSKTKKRRSLGLGPGERVEVQVLNID 981 Query: 710 LQRKRIALTM 719 + R RI L + Sbjct: 982 IPRSRITLDL 991 >UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=delta/epsilon subdivisions RepID=D1B1Y3_SULD5 Length = 704 Score = 689 bits (1779), Expect = 0.0, Method: Composition-based stats. Identities = 262/720 (36%), Positives = 409/720 (56%), Gaps = 22/720 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + I+ + E + ++LL+EG+T+PFIARYRKE+T G D LR E+ +Y Sbjct: 2 NPLIPILVQKTGIAKENIINILKLLEEGSTIPFIARYRKEMTDGASDEALREFESIYAYA 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 ++L+ R++ +L+ I E+ LT ++ A+ +ED+Y PYK K+ +R +AI L Sbjct: 62 KKLQSRKEEVLRLIEEKATLTPEIKSAVEKAQMLQAVEDIYRPYKEKKNSRATVAIANRL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLAD+L + ++ V K A+ GA+ I+ ER+++DA R Sbjct: 122 TPLADILEKAELEAEAFEKKAQSFVNEKVESVKEAISGAQDIIAERYSDDAKEREYWRVQ 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 L + + EG + +E ++++PSHR LAM RG E L + ++ + Sbjct: 182 LHDFSSFEIKASKTLQAEG-LYAKLAGKNERIASIPSHRYLAMMRGVAEKELHVKISYEM 240 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + + E Y + N + ++ ++ + +E E+ ++E+A Sbjct: 241 ERVQSSIERY---------RIPSNAKSSKTYLLEAYGDGFKRLLFPSIEREIHALIKEKA 291 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 + AI F +NL LL P R +G+DP RTG K+AVVD G ++ IYP Q Sbjct: 292 DTGAIATFGKNLSQLLNTPPVTKRVILGVDPAYRTGCKLAVVDEHGTYMSHAVIYPTPPQ 351 Query: 364 A--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + A+ + L +K+++ VAIGNGT SRET+ F+ + ++ ++ +VSEAGAS Sbjct: 352 SDYENASRVIKELAQKYHISAVAIGNGTGSRETQEFFARLNRE-EGLSLAYTVVSEAGAS 410 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 +YSAS++A +E+P+LDV++RGA+SIA+RL+DP+A LVKIDPKS+G+GQYQHDV Q QL + Sbjct: 411 IYSASKIATEEYPNLDVTIRGAISIAQRLRDPMAALVKIDPKSLGIGQYQHDVDQKQLEK 470 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 KL V ED VN +GVD N+AS+ LL+ VAG+ +A+ IV R+ G F + +LL V Sbjct: 471 KLHEVTEDLVNRIGVDPNSASISLLSYVAGVGAKLAKAIVEHRESKGAFTCKSELLHVKG 530 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG KA+EQCAGF RI G + LD + VHPE Y + +++LA A + + Sbjct: 531 LGAKAYEQCAGFFRIREGKSVLDNTGVHPENYAIAQKLLARPDLA--------TLSKEQI 582 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + ++ G T+ DII EL KPG DPR E F + +++L G I+ G V N+ Sbjct: 583 IALALEQGIGEATLQDIIAELLKPGFDPREELPPIAFRSDLTDISELSEGSIVSGVVRNI 642 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK-VKVLEVDLQRKRIALTMR 720 +FGAFVDIG+ DGL+HIS +S K + P V+ + ++VLEVD ++ +++L+++ Sbjct: 643 ADFGAFVDIGLKNDGLIHISQMSEKRIAHPLEVLSINQQLTRIRVLEVDKEKGKVSLSLK 702 >UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Mycoplasma RepID=B3PNC1_MYCA5 Length = 717 Score = 689 bits (1778), Expect = 0.0, Method: Composition-based stats. Identities = 240/723 (33%), Positives = 405/723 (56%), Gaps = 22/723 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN S +A ++ +QV+ ++LL EG T+PFI+RYRK +TGGLD+ + + Sbjct: 1 MNISVLN-VAKKLALEEKQVEETLKLLAEGATIPFISRYRKNVTGGLDEEAIAQINDFYQ 59 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y EL +R++ +++ + E+G LTD+L K I +K +E++Y P+K ++T+ AI Sbjct: 60 YDVELLKRKEYVIEILKEKGLLTDELNKKILEASTKQAVENIYEPFKIGKKTKATEAIAL 119 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + + + V Y + + +T+A + +YI+ + ++D ++ Sbjct: 120 GLEPLAKTIMQNRDESFNVFKEAAKYISEKLPNTEAVIGQTKYIIAQIISQDIEARENIK 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 +++ + + + ++ F Y++ E +S +P+HR LA+ R ++ ++ + + Sbjct: 180 KEIYQYGWIKTALKKDAQDPKQVFLQYYEFGEKISKIPNHRILAISRAEDKKIISYTFDY 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 ++++ D N +L ++ E+ + E Sbjct: 240 S-----------VKKLVYDLSNRYFVNKRTAFITNDCARDALERLILPSIDREIKSELFE 288 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RA+ EAI +FA N+ +L+A + + +DP G K+AV+D G + I+P+ Sbjct: 289 RAQAEAIKIFANNVEQMLLAPATKNKKILAIDPAYVHGCKLAVLDENGNFLEKGLIFPNE 348 Query: 362 GQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK----QFPKVTAQKVIV 415 ++ A + V L +K++++L+ IGNGTASRETE+F ++ + Q P + +V Sbjct: 349 PRSEIKNATLRVNGLLDKYSIDLIVIGNGTASRETEQFISNLLQNRKVQHPNENIRFAVV 408 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 SE GASVYSAS++A +EFP+L V R A++I RR QDPL EL+KI+PKSIGVGQYQHDV+ Sbjct: 409 SEIGASVYSASKIAQEEFPNLSVEERSAINIGRRFQDPLNELIKIEPKSIGVGQYQHDVN 468 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +L +LD V VN VGVDLN+A+ +L+ ++GL+ +A+NIV R +NG F+NR++ Sbjct: 469 QKELTSELDFKVNKVVNMVGVDLNSATKIILSHISGLSNTIAKNIVEHRLKNGNFKNREE 528 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 L V LGPKA+EQ GFLRI+ N D + +HP+ Y + ++LAA +++L N Sbjct: 529 LKNVKGLGPKAYEQSVGFLRIHDSTNFYDKTNIHPDQYELANKVLAALNLNVENLDKNIL 588 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 N K + ++ I+ L PG+D R + +D + T++DL+ G Sbjct: 589 MEAN-KEKLAKELNTNEYDISLILDSLISPGKDIRDDKDGFILSDKLLTVDDLEIGKRYT 647 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNK---FVEDPHTVVKAGDIVKVKVLEVDLQR 712 G V NVT+FGAF +G+ Q LVHIS++ F++ P ++ G+ ++++ +D +R Sbjct: 648 GQVINVTDFGAFFFLGIKQSALVHISNMKKDDESFIKHPSEILNVGENWTIEIISIDKER 707 Query: 713 KRI 715 +RI Sbjct: 708 ERI 710 >UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia mucilaginosa RepID=D2NPD4_9MICC Length = 854 Score = 687 bits (1774), Expect = 0.0, Method: Composition-based stats. Identities = 347/802 (43%), Positives = 473/802 (58%), Gaps = 80/802 (9%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + +A E P ++ AAV LLD N+VPFIARYRKE TG L DTQLR +++RL L Sbjct: 53 EHLINALAVETGIAPHRIRAAVALLDADNSVPFIARYRKEATGALTDTQLRTIQSRLGQL 112 Query: 64 RELEERRQAILKSISE---QGKLTD----DLAKAINATLSKTELEDLYLPYKPKRRTRGQ 116 R LEERR +L++++E +G + L ++ + ++ +Y PY+ +R TR Sbjct: 113 RALEERRNRVLEALTERADEGLIDPLTLLQLRSSLMNAATIADVNAIYAPYRSERVTRAH 172 Query: 117 IAIEAGLEPLADLLWSDPSHTPEVAAAQYVY------------------ADKG--VADTK 156 +A AGL+ L + L P AA Y+ AD+ + + Sbjct: 173 LARAAGLDSLVEDLLEVPLAEAHAIAAAYITDGTEDDEDDEDEGIEAAEADEALQIHSAE 232 Query: 157 AALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLS 216 ALDGAR IL++R D L K+ L ++ + S V++G+E GAKF DYF + + Sbjct: 233 EALDGARAILIDRALTDPVLSEKLLKRLRESGVIESRVIAGQESTGAKFSDYFAFSDRIR 292 Query: 217 TVPSHRALAMFRGRNEGVLQLSLNADP--------------------QFDEPPKESYCEQ 256 ++P HR LA+ R ++ GV++L ++ P + E + +Y + Sbjct: 293 SIPPHRVLALHRAKDAGVVRLKVDVAPAPVALSRLRGAARAEAEAAAENYENVRSAYERE 352 Query: 257 IIMD-HLGLRLNNAPAD-----SWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINV 310 + + +++ N D W V WR + L + + + A A V Sbjct: 353 VAAALRIPVQVLNTVDDEDRVLGWLAATVRTAWRSHLRPRLAERIRHQLLDAAAQHATEV 412 Query: 311 FARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--QAAKAA 368 FA NL D+L+AAPAG + T+GLDPGLR GVK AVVD TG+ + T+YPH Q A+A Sbjct: 413 FASNLRDILLAAPAGHKTTLGLDPGLRHGVKYAVVDGTGEPLRVGTVYPHAPRNQWAEAL 472 Query: 369 MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA---QKVIVSEAGASVYSA 425 +A C +H VEL+AIGNGTASRET++ ++ + + QKV VSEAGASVYSA Sbjct: 473 RELAVACREHGVELIAIGNGTASRETDKLASELIRTLREEGVDAPQKVTVSEAGASVYSA 532 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 S LAA E PD DV++RGAVSIARRLQDPLAELVKIDP+SIGVGQYQHDV L R L+ Sbjct: 533 SALAAAELPDYDVTVRGAVSIARRLQDPLAELVKIDPQSIGVGQYQHDVPPAALRRALND 592 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VEDCVNAVGV+LN+ASV LL VAG+ A+ I+A+R E+G F NRQQLL V RLG K Sbjct: 593 TVEDCVNAVGVNLNSASVQLLAHVAGVGTATAERIIAYRTEHGLFTNRQQLLNVPRLGAK 652 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ-----QALKDLMGN---SSEL 597 F Q AGF+RI G+ PLDAS VHPEAYP+ RI+A Q + +G S L Sbjct: 653 TFRQAAGFIRIRGGEEPLDASAVHPEAYPLARRIIADAQARNGAHWVAGALGTSDGSDPL 712 Query: 598 RNLKASDF--------------TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 L +D+ + GV TV DI EL +PG DPR F+TA+F++ V Sbjct: 713 AGLNPADYVQGSDTQVDAQMSADEAAAGVYTVEDIFTELRRPGLDPRGSFRTARFSESVS 772 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 D++PGM+LEG V+NV FGAFVDIGVHQDGLVHIS +S +V +PH +V++GDIV+V Sbjct: 773 HFGDVRPGMVLEGTVSNVAAFGAFVDIGVHQDGLVHISQMSRGYVANPHDIVRSGDIVRV 832 Query: 704 KVLEVDLQRKRIALTMRLDEQP 725 +V+EVD R+RI+L++ ++++ Sbjct: 833 RVVEVDPARRRISLSLLVEDEN 854 >UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonproteobacteria RepID=A8EWB1_ARCB4 Length = 702 Score = 681 bits (1758), Expect = 0.0, Method: Composition-based stats. Identities = 262/722 (36%), Positives = 413/722 (57%), Gaps = 24/722 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ I+ + + + ++LLDEG T+PFIARYRK+ T G D QLR E Sbjct: 1 MNNHLIEILKEKTNFSSKVISNIIKLLDEGCTIPFIARYRKDFTDGATDEQLRIFEEVYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y ++L R++ I+ + E+ L + + K + + + ED+Y P+K K+ +R AIE Sbjct: 61 YSKKLLVRKEEIIALLKEKNFLDEKVLKNLESATTLQACEDIYAPFKEKKSSRTTAAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+++ S E+ + ++ + A++GA+ I+ +R+A+D +R Sbjct: 121 GLEPLANIIQSMKYSLEEINQKAKQFLNQNITTIDEAINGAKDIIAQRYADDFKSKEVLR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + L ++ + + D +E + + SHR LA+ RG NE L + + Sbjct: 181 NLIANWGTLEIKATKE-LDKNGLYASFVDSNEKIKYIKSHRVLAILRGVNEKQLSIKVEI 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 D + Y I + + +A D + +L L+ E + ++E Sbjct: 240 DENHILENIKKYKIPINAESSKELVFDAYKD---------GLKRLLLPSLKREAITALKE 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +A EAI +F +NL +LL+ AP + +G+DPG +TG K+AV+D G + + IYP Sbjct: 291 KASSEAIELFGKNLKELLLTAPLVNQMILGMDPGYKTGCKLAVIDENGLYLDSAVIYPTK 350 Query: 362 GQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 + ++ V L +K+ + +AIGNGTASRET F ++ KQ + IVSE G Sbjct: 351 PKEDIVSSSKVVLDLIKKYKITTIAIGNGTASRETANFINELIKQ-NNLDVNYAIVSEIG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSAS++A +E+P+LDV++RGA+SIA RL+DP+A LVKIDPKS+G+GQYQHDV+Q +L Sbjct: 410 ASVYSASKIAIEEYPNLDVTIRGAISIASRLRDPMAALVKIDPKSLGIGQYQHDVNQKEL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 A KL+ + D VN VGVDLN+AS LL+ ++G+T +A+NIV R++ +F + +LLKV Sbjct: 470 ALKLENITIDLVNKVGVDLNSASYKLLSFISGITEKLAKNIVEHRNKIKKFNTKNELLKV 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +G KA+EQC GFLRI G + LD + +HPE Y V ++ ++++ Sbjct: 530 KGIGEKAYEQCVGFLRIKDGLSILDNTAIHPEDYEVTAKLQK--NYKVEEIKDFEKVSNE 587 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 + S + DI+ EL KPG D R EF +FA+ + +NDL+ G IL G V Sbjct: 588 INTSLLK--------LKDIVTELLKPGYDVRTEFNQVKFANDILDINDLKEGYILSGIVR 639 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK-VKVLEVDLQRKRIALT 718 N+T+FGAFVDIG+ D L+HIS +S K + V+ ++ +KV+ VDL+++R+ L+ Sbjct: 640 NITDFGAFVDIGLKNDALLHISQISEKRISHASDVLSINQNLENLKVISVDLEKQRVGLS 699 Query: 719 MR 720 ++ Sbjct: 700 LK 701 >UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding domain protein, putative n=1 Tax=Tribolium castaneum RepID=UPI0000D57194 Length = 753 Score = 675 bits (1742), Expect = 0.0, Method: Composition-based stats. Identities = 255/736 (34%), Positives = 394/736 (53%), Gaps = 38/736 (5%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 S ++A ++ V+L ++GNTVPFIARYR+++T LD QLR ++ Sbjct: 28 QWSDHELVAEQLGLGLNVAKNVVKLFEDGNTVPFIARYRRDVTNNLDAEQLRAVKDTCEE 87 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEA 121 + L + ++LK + + G L + L +++ + S ELE +Y PYK +RT + A E Sbjct: 88 ISALRGKIGSVLKQLDKSGVLNEQLRRSVVNSRSIEELEYIYAPYKSGSKRTLAERAKEQ 147 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLE A L ++ V +V D G+ D KA +G +I+ + D+ +L+ +R Sbjct: 148 GLEAPALALLNNTKR---VRFDDFVKIDDGL-DIKAVKNGIAHIIAAVISTDSEILSSLR 203 Query: 182 DYLWKNAHLVSTVVSGKE---EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 ++ K ++ T + + E KF +YFD PL + H+ LA+ RG N +L + Sbjct: 204 EFRKKANIIIKTKKAATKHKVENSEKFDNYFDFEVPLKYIKPHQVLAINRGENLKILSVK 263 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + ++ D + K + +++ V ++ E+ Sbjct: 264 VVLPDSLFNEFRKK------CDKWTSLRGDRVRQDVVKRAIEDSYQRLVKPLIKREIRAE 317 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 +++ AE + VF+ NL DLL+A P + +GLDPG G K+A++ G L+ + IY Sbjct: 318 LKQNAERASCQVFSSNLKDLLLAPPLRGQTILGLDPGFTNGCKLALISPLGDLIDQNIIY 377 Query: 359 PHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVS 416 PH + + + ++N EL+A+GNGTA R+TE + D+ K F + + +V Sbjct: 378 PHKRKNNDDVTIIRDMLLENNCELIALGNGTACRQTEEWLSDLIKSQVFSPLDVKYTVVR 437 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 E GAS+YS S A +EFP +D ++ AVS+ARRLQDPLAELVKI+PK +GVG YQHD+ + Sbjct: 438 EEGASIYSCSPEAKKEFPTIDPNIISAVSLARRLQDPLAELVKIEPKHLGVGMYQHDIKK 497 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 QL L+ VV +CV+ VGVDLNTAS LL VAGL+ AQ I+ +R ENG F +RQQL Sbjct: 498 RQLEEALNDVVSECVSFVGVDLNTASRCLLRHVAGLSDKKAQQIIDYRAENGPFISRQQL 557 Query: 537 LKVSRLGPKAFEQCAGFLRINHGD------NPLDASTVHPEAYPVVERILAATQQALKDL 590 LKVS +G K F QCAGF+R+ N LD++ +HPE+Y + ++L L D+ Sbjct: 558 LKVSGIGQKIFTQCAGFVRVVPPSGETMKYNKLDSTNIHPESYEMATKLLKMFNLRLCDI 617 Query: 591 MGN------SSELRNLKASDFTD-EKFGVPTVTDIIKELEKPGRDPRPE--FKTAQFADG 641 E+ L S + T+ I+ +P K F G Sbjct: 618 GTTGFITIAKREVPKLDLSKLSQMFGSNEQTLRLILDAFCQPLNYDLRSDYDKKPVFKKG 677 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + ++DL+ G++L G VTNVT+FG+FVDIGV +GL+H+S + + G+ V Sbjct: 678 LIEISDLKSGIVLTGVVTNVTHFGSFVDIGVGINGLIHVS-------KSNGLDLHLGNKV 730 Query: 702 KVKVLEVDLQRKRIAL 717 +VKVL +D+++KRI L Sbjct: 731 EVKVLSIDVEKKRIGL 746 >UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 Length = 706 Score = 674 bits (1740), Expect = 0.0, Method: Composition-based stats. Identities = 243/722 (33%), Positives = 406/722 (56%), Gaps = 20/722 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D + + +++ + + + LL + NT+ FIARYRK +T +D+ Q++ + Sbjct: 1 MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YL +L +R++AI+K++ ++G LTDDL ++IN +LE+LY PY ++T+ +AIE Sbjct: 61 YLTKLNKRKEAIIKNLEQKGLLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA L+ + + + Y ++ V A+ GA I+ ++ A DA L + Sbjct: 121 GLEPLALLILKNNPN-CNIKEVAKQYLNEQVLSVDEAIAGACDIIAQKVANDATLRQMLY 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + K+A L++ + + F Y++ P+ + +++ +A+ R ++ L+ Sbjct: 180 ETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDF 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 +F + R N + + + K V+ + ++ + + + Sbjct: 240 KKEFLID---------FAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLD 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 A ++ +F+ NL LL+ P +G DPG G K+AVVD +L+ TD IYPH Sbjct: 291 EAHQQSAQIFSDNLQQLLLQKPLKDHIVLGFDPGYAHGCKLAVVDKNNQLLHTDIIYPHK 350 Query: 362 GQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q +A T+ +L K+ + +AIGNGTAS E+ F D+ K+F K+ ++SE G Sbjct: 351 PQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEF-KLNINYCVISEDG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 AS+YSAS +A++EFP+L V R A+SIARR+ DPL EL+KIDPKSIGVGQYQHD+++ L Sbjct: 410 ASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNIL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 +K+D ++ CVN VGVD+NTAS+PLL++V+GL + A+ I + E+ ++R+QL + Sbjct: 470 EQKVDFCIDYCVNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTI 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 + K FEQ AGFLRIN+ N LD +++HPE+Y +V ++ + + DL+ N L Sbjct: 530 PYVTDKVFEQAAGFLRINNSLNFLDKTSIHPESYAIVNQLCEYIKLPINDLINNHQVLNQ 589 Query: 600 LKASDFTD-EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 L +D T+ K V T+ +II L+ P +D R ++ + +NDL+ GM+++G + Sbjct: 590 LNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLKVGMLVQGTI 649 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 N T FG+FVDIG+ D L+HIS S + + + ++D ++I+L Sbjct: 650 RNQTQFGSFVDIGLKNDALLHISHYSE------QDNLHVNKNINAYIDKIDTIAQKISLK 703 Query: 719 MR 720 +R Sbjct: 704 LR 705 >UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586461 Length = 783 Score = 665 bits (1715), Expect = 0.0, Method: Composition-based stats. Identities = 245/744 (32%), Positives = 378/744 (50%), Gaps = 36/744 (4%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 +N+S R +Q P V+ V+LL+E TVPFIARYRKE TG ++ +R +++ L Sbjct: 48 LNESGIRSNGNPVQ--PRIVENVVKLLEEECTVPFIARYRKEQTGNMEAAVIREIKSSLE 105 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIE 120 L+ ++E+ ++ L + ++ KLT +L ++ + S ELE L+ P+K + T + A Sbjct: 106 ELKVVQEKTKSHLGKLGKEKKLTKELRESFCNSHSMIELEQLFAPFKAGSKTTLAERARR 165 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAK 179 GLEP A+ L + + + + +++ D +G G ++I+ E ++D + Sbjct: 166 TGLEPAAEKLLGETAGLFNIQS--FIHPDTEGCRTAAEVEKGVQHIIAEVVSKDKTTVDY 223 Query: 180 VRDYLW-----------KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFR 228 +R + K ++ + KF+ YFD ++T+ H+ LA+ R Sbjct: 224 LRSCVKDMKDQIFLSVSKAGQARKKTKKEQQVDYEKFQTYFDGKFSINTIKPHQVLAINR 283 Query: 229 GRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVL 288 G L + + + + + N+ + V + + Sbjct: 284 GEEFKALTVKVTLPDRL----TKQFINWCKAKWCSHTQPNSYSSKIMCMAVDDAYNRLMS 339 Query: 289 MHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDAT 348 + E+ T+ + AE +I VF +NLH LL+ P R +G+DPG + G K+A++ AT Sbjct: 340 PMILREIRSTLNKTAEKASIEVFTQNLHRLLLTPPVKGRVILGVDPGFKNGCKLAMISAT 399 Query: 349 GKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FP 406 G+++ T HTG + L + E + IGNGTA R+TE F+ +V K Sbjct: 400 GEILTTSVSLMHTGNKYYERNKMIDLIQTFKCETIGIGNGTACRQTEEFFSEVIKSGSLQ 459 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIG 466 + Q IV+E GAS+YS S A +E P+LD ++R AVSIARRLQDPLAELVKIDPK IG Sbjct: 460 PLHVQYCIVNEDGASIYSVSPEAEKEMPNLDPNIRSAVSIARRLQDPLAELVKIDPKHIG 519 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE 526 VG YQHDV + L L VVE+ V+ VGVDLN S LL V+G++ +A+ I++ R Sbjct: 520 VGMYQHDVPERLLKAALGDVVEESVSFVGVDLNICSEVLLKWVSGISACLAKKIISHRQR 579 Query: 527 NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQA 586 G F NRQ LL V LGPK F+QCAGF+RIN + ++ E + R+L + Sbjct: 580 FGAFINRQMLLDVKGLGPKTFKQCAGFVRINPTGGAEETNS--DEVIVISTRLLKMAFAS 637 Query: 587 LKDLMGNSSELRNLKA-------SDFTDEKFGVPTVTDIIKELEKP-GRDPRPEFKTAQF 638 +D+ S + S G PT+ II L++P D R EF F Sbjct: 638 GRDIGSESIRGKLDNLIKSRGNASLAGSIGVGEPTLDLIINGLKQPTNYDIRVEFDKPLF 697 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + +++ + PGM L G VTN +FG FVDIGV GL H S + + ++ V+ G Sbjct: 698 KQNIMSIDQIIPGMQLTGRVTNAVHFGVFVDIGVKDKGLCHRSHMLHHILK--GKVLGPG 755 Query: 699 DIVKVKVLEVDL-QRKRIALTMRL 721 D V+V V+ L + ++RL Sbjct: 756 DKVEVVVISKKLTDSGKWNFSLRL 779 >UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L5_MYCS5 Length = 705 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 225/718 (31%), Positives = 396/718 (55%), Gaps = 20/718 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M I+A E+ QV+ + EG TVPFIARYR+ T L++ Q+ +++ Sbjct: 1 MESKNYEIVAKELNITVSQVETVLNYFKEGATVPFIARYRQSQTNNLNEEQIYAIQSLYL 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y EL +R++ I++ + E L +DL + IN+ K+ELE +Y PYK + T+ ++AIE Sbjct: 61 YASELSKRKEKIIEKLKELNLLNNDLEQKINSCTKKSELESIYEPYKSGKITKAKMAIEL 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GL PLA +W++ + ++ + + + YIL ++ +ED L K++ Sbjct: 121 GLMPLALKIWNNKNSRFDLNFEARKFLSDKLKTLDEVILNVNYILSQKISEDFDLREKLK 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + L+ + +++E +F++Y+ + P+ V +H +A+ RG N ++ + Sbjct: 181 ENILAYGKLICK-KTKEQDENDRFKNYYQYSTPIKYVKNHNIMAINRGSNLKKIKWDVYL 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 + + E + + ++ K V+ + +L L+ ++ + + Sbjct: 240 NFEILERISLRKITKFKFN-----------EALLKDAVNDALKRLILPSLKNKIFSDLFD 288 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 AE ++I +F+ N+ LL A + +DPG +G K+A + G ++ TIYP+ Sbjct: 289 EAEKKSIEIFSNNVETLLSAPAVSGHNILAIDPGYVSGCKLAALSEKGSVLEIATIYPNE 348 Query: 362 GQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 ++ +A V L +KHN+ ++ IGNGTASRETE+F ++ ++ IVSEAG Sbjct: 349 PRSNVSQAKTKVLELIKKHNITIIVIGNGTASRETEQFINNLIQENNLDNIYFCIVSEAG 408 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSASE+A +EFP+L V R A++I R+ DPL ELVKIDPKSIGVGQYQHDV+Q +L Sbjct: 409 ASVYSASEIAIEEFPNLSVEKRSAINIGRKFLDPLNELVKIDPKSIGVGQYQHDVNQKEL 468 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 L+ V+ VN GVDLN+AS +L+ ++GL + +QNI+ +R++N F++R ++LKV Sbjct: 469 QNYLNFKVQKVVNNYGVDLNSASREILSYISGLDKKTSQNIINYRNKNKSFKSRDEVLKV 528 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQ-ALKDLMGNSSELR 598 +GPK FEQ GFLR+ + N LD + +HPE+Y + +I++ + ++ + N Sbjct: 529 DGIGPKTFEQSIGFLRVFNSSNFLDKTAIHPESYSLANKIISEYKLIPSEEGIKNLELNA 588 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + ++ + + I+ L+ P + R + + + +L+ G I++ + Sbjct: 589 KELSEKYSS---SIEEINLILSSLKNPTKIIRSSKQGYLLKKNLINLENLKIGDIVDATI 645 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 N+T+FG F IG+ + VHIS+L+ K + + +++KV++ E++ + K+I+ Sbjct: 646 DNITDFGLFCYIGLKESLFVHISNLAKK--GNIYESYNLNNLIKVEITEINKENKKIS 701 >UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=Culicini RepID=Q17DE1_AEDAE Length = 968 Score = 650 bits (1677), Expect = 0.0, Method: Composition-based stats. Identities = 252/764 (32%), Positives = 401/764 (52%), Gaps = 61/764 (7%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 ++A ++L +E NT+PFI RYRKE+ G + LR+++ + Sbjct: 215 QWDDYELLAEMQNIDRRTARTIIKLFEEENTIPFICRYRKELIGDMTPDDLRDVKLAYNQ 274 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEA 121 + ++ + I+K++ ++ KLT+D+ + + S EL+ +Y P+KP + + A Sbjct: 275 ILSIKSKADTIIKNLEKEEKLTEDIKQDLLCAKSIDELDHMYAPFKPANKGSLADRAKAL 334 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+ A+ + PE+ + V + +G+ + +G ++++ F+++ A+L ++ Sbjct: 335 GLDSFAEGIL--IGSLPEIDLPELVKPEVEGLETVEKVEEGIKHLMAHNFSKNTAVLEEI 392 Query: 181 RDYLWKNAHLVSTV---VSGKEEEG----------------------AKFRDYFDHHEPL 215 R + K ++S+ S K EE KF YF Sbjct: 393 RRLISKYDIVLSSTQITKSRKAEEKDESNNNGKGAGGMKRIPKKVDEHKFEHYFSFTCCT 452 Query: 216 STVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWR 275 + H+ +A+ RG N+ VL + L QF + K + ++L + Sbjct: 453 KYLRPHQIMALNRGENQKVLSIKL----QFKDNVKGDLYWFLKKEYLQEGTASRKRTELF 508 Query: 276 KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPG 335 + + K++ + + + +RAE ++ VFA NL LL+ AP +G+DPG Sbjct: 509 EASFDEAFTKKLVPLMSRTVRSELTKRAEKASVEVFANNLKQLLLTAPVKGEKILGIDPG 568 Query: 336 LRTGVKVAVVDATGKLVATDTIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRE 393 G K+A++ G L+ T TIYPH G ++ A +A + KH+ L+A+GNGTA RE Sbjct: 569 FSNGCKLALISECGDLLDTATIYPHIGGERSKVAPGILANMMRKHSCALIALGNGTACRE 628 Query: 394 TERF--YLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 TE Y+ + K + IV E GAS+YS SE+A +EFP +DV+L AVSIARRLQ Sbjct: 629 TESMLSYMMEEGILDKRFVRYSIVPEQGASIYSCSEVAKKEFPKMDVNLISAVSIARRLQ 688 Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DPL E VKI+PK +GVG YQHD+++ L+ LD VV +CV+ VGVD+NTASV LL+ V+G Sbjct: 689 DPLCEYVKIEPKHLGVGMYQHDINEKSLSETLDEVVMECVSFVGVDINTASVSLLSHVSG 748 Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN------HGDNPLDA 565 LT A++IV+ R +NG F++R+QLLKV +G K F QCAGF+RI N LD+ Sbjct: 749 LTAKRAEHIVSHRTKNGPFRSREQLLKVKFIGDKTFTQCAGFIRIEPLTAGIRDYNLLDS 808 Query: 566 STVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP-----TVTDIIK 620 + VHPE+Y + E I+ + KD +G + ++ + K +P T+ I Sbjct: 809 TWVHPESYALAESIITKAGLSNKD-IGRVDFILGIRDFAYRTPKSALPGMFNQTIERIEC 867 Query: 621 ELEKPGRDPRPEFK-----TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 L R+ +++ F G+ +M+DL G +L GAV NVT+FGAFVDIGV + Sbjct: 868 VLSALQRELLRDYRADINKPPMFKKGLTSMSDLAEGTVLTGAVNNVTDFGAFVDIGVENN 927 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 GL+H S ++ V GD V+V VL +D+ + R+ L + Sbjct: 928 GLIHRSKMNGMRV-------NIGDQVEVTVLSIDVGKGRLGLKL 964 >UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJP5_THEM4 Length = 662 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 255/714 (35%), Positives = 396/714 (55%), Gaps = 58/714 (8%) Query: 9 IIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEE 68 IIA E++ + QV A+ LL E NT+ F++RYRK+ TGGL++ QLR +E R YLR +E+ Sbjct: 4 IIAKELEIKSWQVKNAIELLKE-NTIHFVSRYRKDQTGGLNEIQLRKIEKRYKYLRNVEQ 62 Query: 69 RRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLAD 128 + ILK + + G LT L K I T + ELED+YLP+K +++T+ IAIE GL PLA+ Sbjct: 63 LKIKILKILEKDGVLTPQLKKKIEHTFTLNELEDIYLPFKKRKKTKADIAIENGLLPLAE 122 Query: 129 LLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 + + + V + + ++G IL ++F+ + + K+ +L K Sbjct: 123 K------------STKGTINLELVNEKEKIIEGITDILAQKFSHNDIVRKKLEIFLIKYG 170 Query: 189 HLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 + K ++ K+ Y + + LS + H L++ RG EG L++ L +F E Sbjct: 171 Y---VKCKKKVKKKTKYDMYDNFTKKLSLLHPHNILSINRGEKEGALKVKLYLPEKFKED 227 Query: 249 PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAI 308 I + + N +K W+I + +E + + E+AE+ +I Sbjct: 228 ---------IFNLMNWNKNEIVEKGLKK-----GWKI-LFSSIEKRVRKILTEKAEERSI 272 Query: 309 NVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--QAAK 366 VF++NL LL+ P + +DPG +TG K+ +D G + IYP Sbjct: 273 KVFSKNLKQLLLTPPLKNTRILAIDPGNKTGCKIVALDELGNPLEHAVIYPTAPYFDTKN 332 Query: 367 AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSAS 426 + + + + H ++L+ IGNGTASRET++F K++ + + + +EAGASVYS S Sbjct: 333 SEKKILKMLQNHKLKLIVIGNGTASRETQQFIAKTIKKY-NLKTKYIFSNEAGASVYSVS 391 Query: 427 ELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAV 486 ++A +EFP LD ++R A+SI RR+QDPLAELVKIDPKS+G+GQYQHD++Q +LA +L Sbjct: 392 DIAIEEFPTLDPTIRSAISIGRRVQDPLAELVKIDPKSLGMGQYQHDINQKKLAEELKNA 451 Query: 487 VEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKA 546 V D VN +G+DLN+AS LL VAG+T +A+ IV +R + G+F R+QLL++ LG K Sbjct: 452 VTDIVNQLGIDLNSASSKLLEHVAGITPSLAKKIVNFRKKIGKFTERKQLLEIEGLGQKT 511 Query: 547 FEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT 606 + QCAGFLRI +G NPL+++ +HPE Y + IL L L Sbjct: 512 YTQCAGFLRIKNGKNPLESTAIHPEHYKIANEILKNNIYDLDYLSKK------------- 558 Query: 607 DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGA 666 G+ T+TDII EL+ G++ T F + + +L+ GM L+G V N+T+FG Sbjct: 559 -FNVGILTLTDIINELKSMGKE--DNLPTPIFYNEITDFKELKIGMKLKGKVINITDFGI 615 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 FVDIG+ + G +H + + +K DI+ V+V+++D + I L R Sbjct: 616 FVDIGLKESGFIHKKLIDKE--------IKINDIIDVEVIDIDNDLRYIKLKSR 661 >UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFY9_THEAB Length = 675 Score = 639 bits (1649), Expect = 0.0, Method: Composition-based stats. Identities = 244/714 (34%), Positives = 402/714 (56%), Gaps = 44/714 (6%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 ++I+ ++ QV A+ LL E NT+ F+ARYRK+ TGGL++ QLR ++ Y ++E Sbjct: 3 KLISKKMNLENWQVKNAILLLKE-NTIHFVARYRKDQTGGLNEEQLREIQNLFHYYEKVE 61 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 + ++ ILK++ ++ KLT +L K I + ELE +YLPYK K++++ IAIE GL L Sbjct: 62 KEKKKILKALEKENKLTIELKKKIENSYDLDELEQIYLPYKKKKKSKADIAIENGLLELY 121 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 + L ++P + + +K ++G I+ + F+ D + ++ +++ Sbjct: 122 NKLINNPESFEKEIPKYF---NKIFDTKDKVIEGLINIIAQNFSHDENIRKRLEFLIFEY 178 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 +L T K + K+ Y + + + + + L++ RG E +L++ + D +F Sbjct: 179 GYLKCT---KKVDYKTKYDAYENFSQKIKNLKEYSVLSINRGEKENILKVQIVLDDKF-- 233 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 K + +D + WR K+ ++ + + ++AE+ A Sbjct: 234 --KNEIFKLTKLDLKNEIILKGLELGWR----------KLFDSIKKRIRNQLTQKAENRA 281 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--QAA 365 I +F++NL LL+ P + + +DPG +TG K+AV+D GK + I+P Sbjct: 282 IVIFSKNLKQLLLTPPLKDKRILAIDPGNKTGCKIAVLDENGKFLEKAIIFPTPPHNDIE 341 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA 425 + V L +K ++ L+ IGNGTASRET++F ++ K+F + + + +EAGASVYS Sbjct: 342 NSEKIVIELIKKFDLNLIVIGNGTASRETQKFIVNTIKKF-NLDVKYIFANEAGASVYSV 400 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 S+LA +EFP+LD ++R A+SI RR+QDPL+E VKIDPKS+GVGQYQHDV+Q +L +L+ Sbjct: 401 SKLAMEEFPNLDPTIRSAISIGRRVQDPLSEFVKIDPKSLGVGQYQHDVNQKRLEEELNN 460 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 + +D VN VGV+LNTAS LL V+G+T +A+ IV +R+++G+F R QLL + LG K Sbjct: 461 ITKDVVNMVGVNLNTASAKLLEYVSGITPSLAKKIVKYREKHGKFIERNQLLNIEGLGEK 520 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 FEQCAGFLRI G NPL+ S +HPE Y + +I++ + + Sbjct: 521 TFEQCAGFLRIIDGKNPLEKSRIHPEQYEIANKIISLNLDNIDIEKLSREL--------- 571 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 G+ T+ DII EL+ PG DPR + D + T DL+ G+ L+G VTN+T+FG Sbjct: 572 ---NVGILTLKDIINELKNPGLDPRESIPKPKLFDDILTFEDLRIGLRLQGKVTNITDFG 628 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 AF+DIG+ + + + + + DIV ++++++D Q + I + + Sbjct: 629 AFIDIGLKESAFL--------YKKLITRDLNINDIVDIEIIDLDQQLRHIKVKL 674 >UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding domain-containing protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C576 Length = 795 Score = 637 bits (1642), Expect = 0.0, Method: Composition-based stats. Identities = 244/793 (30%), Positives = 387/793 (48%), Gaps = 91/793 (11%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLD-EGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 +++ + + +++++ + T+PFI+RYRKE+T G+D LR L Sbjct: 7 KWDIAHLLSERLNVDKNTANNIIQMIEVQECTIPFISRYRKEVTHGMDPNTLRMFLDTLK 66 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 LR+++++ ++ + +Q L + +++NA + E+ L PYK ++T A Sbjct: 67 ELRDVQKKATTAIRQVQKQEPLDHAVVESLNAAETVEEINVLLAPYKVDKKTLACRARTL 126 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+ A + ++P + ++V D +G A+ K G ++I+ E A D L ++ Sbjct: 127 GLDNAAKAILNNPRQL--INLNEWVKKDCEGRANLKEVKTGVKHIICEAIARDKTTLERI 184 Query: 181 RDYLWKNAHLVSTVVSGKEEEG----------------AKFRDYFDHHEPLSTVPSHRAL 224 + YL + +S +++ +KF Y +S + S++ L Sbjct: 185 KRYLKPTCLTLEAKMSASKKKAMDAEKEKGGHSTSQNTSKFECYHHFQHNVSALRSYQVL 244 Query: 225 AMFRGRNEGVLQLSLNA----DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVS 280 A+ RG L + ++ + F + + E+ + + L K V+ Sbjct: 245 AINRGEALKELTVKIHISERAENNFIDWCNYKWAEEHKYEDMKTLL---------KECVT 295 Query: 281 WTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGV 340 + + + + + + A+ ++++VF RNL LL+ +P + +G+DPG + G Sbjct: 296 EAYTRLLKPQVLRKTRSELTKTAQMDSVHVFGRNLKKLLLTSPVRGKIILGIDPGYKNGC 355 Query: 341 KVAVVDATG-KLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYL 399 K AVV + G +++A D Y H A A + L K N++L+ IGNGTA RETE Sbjct: 356 KCAVVSSNGMEILAVDVFYLH--HANPAVSKLLQLLNKFNIQLIGIGNGTACRETEELVS 413 Query: 400 DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVK 459 K + IV+E+GAS+YS +E A QE PDLD +LR AVSIARRLQDPL ELVK Sbjct: 414 RFIYVSCKKDLKYCIVNESGASIYSVTEEAKQEMPDLDPNLRSAVSIARRLQDPLVELVK 473 Query: 460 IDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQN 519 ID K +G+G YQHD+ + L +VVEDCV VGVDLN A LL VAGL + Sbjct: 474 IDAKHLGIGMYQHDIPDILMKATLQSVVEDCVTFVGVDLNVAGASLLRHVAGLKKTQVDK 533 Query: 520 IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI----------------------- 556 I+ WR++NG F NR QLL+V +G K FEQCAGF+RI Sbjct: 534 ILKWREKNGPFINRDQLLEVPGVGKKTFEQCAGFMRIVQKANTPSECQKKSVKTEHVKTE 593 Query: 557 ---------------------NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN-- 593 +H NPLD + +HPE+Y E+ L + ++ + Sbjct: 594 PTDKRKRKITATSKNSKKQKLHHEVNPLDQTWIHPESYKTTEQFLKKINLSSSEVGKDYF 653 Query: 594 ----SSELRNLKASDFTDE-KFGVPTVTDIIKELEKP--GRDPRPEFKTAQFADGVETMN 646 +R S F +E + G PT+ II L P RD + + G+ + Sbjct: 654 ISNIKQAVRKKTISQFANELEVGEPTLQLIIDGLSAPCGYRDI-RNVTSHFYKTGISCIT 712 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL+ G ++G V+NV +FG FVDIGV DGLVH S + K+ E+ V+ D++ V V Sbjct: 713 DLRCGTTMQGKVSNVVDFGIFVDIGVGTDGLVHSSDMKGKW-EELRHVLGPNDLISVAVT 771 Query: 707 EVDLQRKRIALTM 719 V+ +KRI+L + Sbjct: 772 NVNKPKKRISLRL 784 >UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Apis mellifera RepID=UPI0000DB7BEF Length = 740 Score = 611 bits (1575), Expect = e-173, Method: Composition-based stats. Identities = 241/751 (32%), Positives = 370/751 (49%), Gaps = 95/751 (12%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 I+ + V+L + NT+PFIARYRK++TGG++ +LR L+ + + +++R Sbjct: 40 ISEMNNVEKHIAENIVKLFNNDNTIPFIARYRKDMTGGMEPDKLRALKESFDHAKMIKQR 99 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPK-RRTRGQIAIEAGLEPLAD 128 ILK+I + G+ + D+ AI + +LE +Y +KP +RT + A + GL ++D Sbjct: 100 AHTILKAIDKLGQWSPDIHFAIISAKCLDDLEHIYSLFKPSSKRTLAEKAKDLGLGYISD 159 Query: 129 LLWSDPSHTPE----VAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 LL E + + + +K V + + + Sbjct: 160 LLLQVKELQNESIIKIQSTECKPKNKSVNNKEKNM------------------------- 194 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K+ YFD + ++ H+ LA+ RG + +L + + P Sbjct: 195 -----------------HRKYEIYFDFNTNNRSIKPHQILAINRGEAQKILTIKIIL-PD 236 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 F E ++YC + + + ++ + + + + + + + ++ +AE Sbjct: 237 FFEKEFKTYCYK--YYRIAMIVSKLHSKLLNNSI-DYAYTKFIKPLVIRRVRSEMKRKAE 293 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG-- 362 +I VF N+ LL+ P + +G+DPG G K+AV+ G ++ T IYPH Sbjct: 294 IASIEVFVNNVKQLLLTPPVRGKIILGIDPGYSHGCKLAVISEQGDVLETGVIYPHRNIE 353 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVSEAG 419 ++A + L K+ ++A+GN TA RETE F + K F + IV E+G Sbjct: 354 KTYNESANVLINLVTKYKATILALGNATACRETEIFINKLIKSNSFESLDVSYAIVDESG 413 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 AS+YS S A EFP LD++L A+SIARRLQDPLAELVK++PK +GVG YQHD+ + QL Sbjct: 414 ASIYSCSPEAKSEFPKLDMNLISAISIARRLQDPLAELVKVEPKHLGVGMYQHDLPEKQL 473 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 L+ VV + V+ VG+D+NTAS LL RVAGL A NI+ WR E G F+NRQQL+ V Sbjct: 474 LTSLNEVVSEVVSFVGIDVNTASQCLLKRVAGLNVSRANNILEWRSEFGPFKNRQQLMDV 533 Query: 540 SRLGPKAFEQCAGFLRINHGD-----------------------NPLDASTVHPEAYPVV 576 +G K FEQC GF+RI N LD + +HPE+Y + Sbjct: 534 KGIGSKVFEQCIGFIRILPETSMIDNSKKLRPIKKSKQAIKAEYNLLDQTWIHPESYKIA 593 Query: 577 ERILAATQQALKDLMGNSSELRNLKA-----SDFTDEKFGV--PTVTDIIKELE-KPGRD 628 E L LK+ +G + + +K EKF T+ IIK L K D Sbjct: 594 ENFLKYCNIDLKN-LGTTEFIEKVKLYAKEGFTSLAEKFDTNKTTMEIIIKGLSMKKDED 652 Query: 629 PRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV 688 R + ++ F + T++D+ M+L GAV N+T+FG FVDIG +DGL+ L N Sbjct: 653 IRLKTRSPLFRKSMLTISDINVEMLLTGAVRNITHFGVFVDIGAGKDGLIPTKWLKN--- 709 Query: 689 EDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + G V+VKVL VDL+R RI L + Sbjct: 710 ----FTISIGQRVEVKVLSVDLERNRINLEL 736 >UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q3H7_IXOSC Length = 765 Score = 608 bits (1567), Expect = e-172, Method: Composition-based stats. Identities = 230/758 (30%), Positives = 368/758 (48%), Gaps = 61/758 (8%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 ++ + AR + V V +L + T+PFIARYR+E TGGL +L+N++ L ++++ Sbjct: 13 VSASVNARVDVVRNVVDMLQKDCTIPFIARYRREQTGGLQADELQNIQQTYQSLLSVKKK 72 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEAGLEPLAD 128 Q +L ++++ K + K I + S EL+ ++ PYK K ++ Q A GLE A+ Sbjct: 73 AQTMLAHLAKEEKGDATVKKLIISAKSLEELDHIFAPYKEAKGKSLAQRAKLLGLEDSAN 132 Query: 129 LLWSD----PSHTPEVAAAQYVYAD-------------KGVADTKAALDGARYILMERFA 171 + + PE V + V T+ L G R + R + Sbjct: 133 RILQGQTTVEALPPETLVKPEVKGNLELSGSSEKLSSLSPVKTTEWGLKG-RDPWLVRMS 191 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA--KFRDYFDHHEPLSTVPSHR---ALAM 226 + ++ + GK+++ A K+ +Y + + +V ++ LA+ Sbjct: 192 KSPGIMLTATKSSSAAKKAKEALTEGKQQDHADKKYDNYINFSRDVRSVQPYQARSVLAI 251 Query: 227 FRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 RG ++ +L + + P F + ++C + + + V + Sbjct: 252 NRGESQKMLTVKVVLPPSFPVSVR-NFCASRVREQGAKMYGGTLR--LVESAVEDAYSRL 308 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 + HL + T+ + AE E++NVF NL LL+ P A +G+DPG + G K+A V Sbjct: 309 LEPHLIRSIRSTLTKVAEQESVNVFRSNLRQLLLTPPVRGHAVLGIDPGFKHGCKLAAVS 368 Query: 347 ATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ 404 A+GKL+ I+PH A++ A + L HN +L+A+GNGTA RETE F ++ Q Sbjct: 369 ASGKLLQHSVIHPHASPASRYSAGNILRQLVVTHNCDLIALGNGTACRETEAFLSELISQ 428 Query: 405 --FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDP 462 F V + + E+GAS+YS ++ A E P LD ++R AV IARRLQDPL E VK++P Sbjct: 429 RAFMPVPVKFCTIDESGASIYSVTKEAEAELPGLDPNIRSAVGIARRLQDPLLEYVKVEP 488 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVA 522 K +GVG YQHD+S++ L L+ VV +CV+ VGVD+N +L +V+GL A+NIV Sbjct: 489 KHLGVGMYQHDISESVLKNALEGVVVECVSFVGVDINVCPETILRKVSGLNAGTAKNIVD 548 Query: 523 WRDENGQFQNRQQLLKVSRL--------------GPKAFEQCAGFLRINHGDNPLDASTV 568 WR+ +G F+NRQQLL + + G Q +++ +PLD + + Sbjct: 549 WRETHGPFKNRQQLLSLQSVTNENKVCFHLFQRNGSSVPAQKQKSKKVSDEFDPLDMTII 608 Query: 569 HPEAYPVVERILAAT---------QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDII 619 HPE+Y E ++ Q ++ + SS L A V+ I Sbjct: 609 HPESYRFAELLICHLKLKKEDIGKQHFIETVKRESSRLGEHMAGTVRALAVQALPVSVIF 668 Query: 620 KELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 +E E F GV ++++++ G L G V N T FGAFVDIGV +DGL+H Sbjct: 669 LYIEPGPAFLLTEQHQPLFKSGVVSLDEIEVGQELTGKVKNCTQFGAFVDIGVGKDGLIH 728 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 S ++ V GD V V V+ ++ R RI L Sbjct: 729 CSQMNGHRV-------NLGDRVTVLVVNLERSRGRIGL 759 >UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59DV5_DROME Length = 993 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 237/819 (28%), Positives = 395/819 (48%), Gaps = 110/819 (13%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + ++A +P+ V+L ++ NT+PFI RYR+++ + +LR++ + + Sbjct: 183 WNIDELLAETESIQPQAARNIVKLFEDENTIPFICRYRRDLVDHIAPDRLRDIRNTYTEI 242 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEAG 122 +L +R + I+ + + +T ++ + + S ELE LY PYKP + T + A G Sbjct: 243 VDLRKRAENIIGKLQRENIMTPEIREELMCAKSNEELEFLYAPYKPASKGTLAERAKALG 302 Query: 123 LEPLADLLWSDPSHTPEVAAAQYV-YADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 L+ AD L + P+V ++ V ++ +A + G I++ +++ +L ++R Sbjct: 303 LQVYADCLLYGSA--PKVNLSEIVDRRNEALATEALVMSGICQIIIHNISKNTNVLEEIR 360 Query: 182 DYLWKNAHLVSTVV--------------------------SGKEEEGAKFRDYFDHHEPL 215 +N H V + K+ + +KF +YF+ + Sbjct: 361 RL--QNVHRVFLKCSKTKEAKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNFQGDV 418 Query: 216 STVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWR 275 T+ ++ LA+ RG L + + + ++ K I ++ L Sbjct: 419 KTIKPYQMLAINRGEKHKWLSVKI----ETNDYLKRDLMRYITDQYMNQGLQYPLRREVF 474 Query: 276 KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPG 335 + + K+ + ++ ++E+ AI+VFA+NL LL+ +P +G+DPG Sbjct: 475 TKSLEECYAKKLQPLMCRQIRAALKEKGTKAAIDVFAKNLKQLLLISPLKGERILGIDPG 534 Query: 336 LRTGVKVAVVDATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIGNGTASRE 393 G K+A++ T ++ T IYPH + K A + L HN +++ +GNGTA RE Sbjct: 535 FINGCKLALISETADVLYTGVIYPHGAMSNKRAAEQKLVQLLSDHNCKIIGLGNGTACRE 594 Query: 394 TERFYLDV--QKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 TE + + + IV+E GAS+YS S +AA+EFP +D + R AVSIARRL Sbjct: 595 TEHWLTGMFHAGVLDSRIIRYSIVNENGASIYSCSNVAAKEFPKMDTNERSAVSIARRLN 654 Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DPL+E VKI+P+ +GVG YQHDV + L L+ VV +CV+ VGVDLNTAS+ +L +AG Sbjct: 655 DPLSEYVKIEPRHLGVGMYQHDVPEKILTASLNDVVSECVSYVGVDLNTASLSVLKHIAG 714 Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------NPLDA 565 L+ A+ I+ R + G F+ R+ LL V +G K+F QCAGF+RI NPLD Sbjct: 715 LSEKKAEKIIEHRTQKGPFKTRKDLLSVRSIGEKSFVQCAGFVRIEPRSVGGQLQNPLDC 774 Query: 566 STVHPEAYPVVERIL------------------------------AATQQALKDLMGNSS 595 + VHPE+Y VVE + ++ + L+ + + Sbjct: 775 TWVHPESYNVVESLAFSSAALTNKEVSLGVTMSLSCCVMPAMFFGQSSSKFLRFVTSSIV 834 Query: 596 ELRNLKASDFTDEKF---------GVPTVTDIIKELEKPGR----------------DPR 630 +LK SD F P + I K+ + P Sbjct: 835 GECDLKLSDVGKAAFIASIKQFASSQPNLDRIAKQHKLPMERLEFLLVALQRELLQDYRA 894 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K F G+ ++DL G ++ GAVTNVT FGAFVD+GV ++GL+H S+++N Sbjct: 895 DLDKRPLFKQGLTRLDDLSMGEVVTGAVTNVTQFGAFVDVGVERNGLIHNSNMNN----- 949 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + + GD + V++VDL+R++ L +RL+ ET+ Sbjct: 950 --SQLSVGDRIVASVVKVDLKRRQ--LELRLENMLMETD 984 >UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FHE5_9CHLO Length = 768 Score = 603 bits (1555), Expect = e-171, Method: Composition-based stats. Identities = 282/740 (38%), Positives = 387/740 (52%), Gaps = 46/740 (6%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA E+ R V AV L+DE TVPFIARYRKE TGG+D+ LR + RL L +LE+R Sbjct: 22 IARELGLRERHVREAVALMDEECTVPFIARYRKEATGGMDERALRRVADRLGELDKLEQR 81 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 R AIL ++ + G L LA+A+ A + T LEDLYLP++PKR TR A++ GL PLAD Sbjct: 82 RDAILAALEKSGDLNPALARAVAAADTPTRLEDLYLPHRPKRATRASAALDLGLGPLADD 141 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 L DPS + GVAD AA+ GAR I+ E K Sbjct: 142 LL-DPSTPYSRGFIRRFVKAPGVADDDAAMRGARDIVAE-----------------KAGE 183 Query: 190 LVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 V + + RDY + + H+ LA+ R GV+++S+ ++D+ P Sbjct: 184 CVEAREAARRASRDAARDYLSFERDIQRIQPHQYLALCRAETAGVVRVSV----EWDDTP 239 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 + ++ + + + V + + E E +R+ A A+ Sbjct: 240 AVDAARRALVR----KGLRGEKAAEVEAAVKDGVKRLLRPAAERETRARLRDDAIRRAVR 295 Query: 310 VFARNLHDLLMAAPAGLRA-TMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAA 368 F N+ L++A P A +GLDP RTG K+A V ATG ++A ++P A A Sbjct: 296 DFGANVAALILAPPMRPAAPVVGLDPAHRTGCKIAAVSATGAVLAAAVVHPRREDANAAG 355 Query: 369 -----MTVAALCEKHNVELVAIGNGTASRETERFYLDVQ----KQFPKVTAQKVIVSEAG 419 CE+H VA+G+G +RE ER K +VSE G Sbjct: 356 GGEAGRRFREFCERHGARAVAVGDGVGTREAERMVAAALAGSKKSGSTSGIGWRVVSECG 415 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSASELA E PDLDVSLRGAVSIARRLQDP+AELVKI+P+ +GVG YQHDV +L Sbjct: 416 ASVYSASELAIAELPDLDVSLRGAVSIARRLQDPMAELVKIEPRHLGVGLYQHDVRAKEL 475 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 A +LD VE V A GV+LNTAS LL RV G+++ +A+ VA R+ G F +R+ LL V Sbjct: 476 AAELDQAVESAVAAAGVNLNTASAALLARVPGMSKSLAEKTVAHRESRGPFASRRGLLDV 535 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI----LAATQQALKDLMGNSS 595 +G K F+Q AGFLR++ + L+ + VHPE Y + L + A+ L+G + Sbjct: 536 KGVGEKTFQQAAGFLRVDSAKDALEMTAVHPEGYEAAMEVRLEDLRRLRPAIDSLLGRGA 595 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ-FADGVETMNDLQPGMIL 654 K + G T+ + ++ + KPG D R F A ++ DL+ G +L Sbjct: 596 SDPEFKTIA-SAAGIGELTLKETLRAMAKPGVDDRDVFDAASRLRTSALSLTDLKVGDVL 654 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLS----NKFVEDPHTVVKAGDIVKVKVLEVDL 710 EGAV NV FGAFVD+GV GLVH S++ +PH V+ AG V+V+V+ VD Sbjct: 655 EGAVRNVVPFGAFVDVGVGVSGLVHKSNMRGGNDKGRAPEPHEVLSAGQAVRVRVMSVDA 714 Query: 711 QRKRIALTMRLDEQPGETNA 730 QR RI L + E+ E Sbjct: 715 QRNRIGLALLHRERRAEVAP 734 >UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4RY29_OSTLU Length = 794 Score = 602 bits (1552), Expect = e-170, Method: Composition-based stats. Identities = 260/758 (34%), Positives = 389/758 (51%), Gaps = 64/758 (8%) Query: 16 ARPEQVDAAVRLL-DEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAIL 74 R EQ+DAA+RLL DE T+PF+ARYRKE T GLD+ QLR + + LE +R++ Sbjct: 46 VRREQIDAALRLLIDEQCTLPFVARYRKERTDGLDEGQLRAVAAAHAEWTRLESKRESAF 105 Query: 75 KSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSDP 134 ++++ + + L + + +EDL YK K +R A E G EPLA+ + SD Sbjct: 106 EALTRLEIVDERLFARLREASAVETIEDLMSKYKTKTSSRADRARELGCEPLAEKILSDG 165 Query: 135 SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTV 194 + E A YV + V D AL A+ +L ER A + + R W+N L + Sbjct: 166 AGGVEALARAYVNGND-VPDVCEALRLAKDVLAERAANETSAREAARRSTWQNGRLQCAL 224 Query: 195 VSGKEE-------------EGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + RDY++ + PL V H+ LA+ RG VL++ ++ Sbjct: 225 TTNGKAAVEGKIDDKKMKKIADALRDYYEFNAPLRRVKPHQTLAILRGEAAKVLRVKIDF 284 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 D + + LG N +++ V + + +E E ++ Sbjct: 285 DVAWATSAAMKAM--VGSRRLGGGCYNVVSEA-----VEDGVKRLLAPSIEREAKSRLKT 337 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLR-ATMGLDPGLRTGVKVAVVDATGKLVATDTIYP- 359 A + AI F NL LL+ P +G+DP RTG K+AVVD TG L+ T ++ Sbjct: 338 EAMERAIADFGANLRSLLLQPPLTPAAVVLGVDPAYRTGCKLAVVDPTGALLDTGVVHLP 397 Query: 360 --------HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQ 411 G + AA + AL ++ NV+ +AIG+G ASRETE F V + Sbjct: 398 QFESKVKREGGGQSAAASKLQALVKQWNVKAIAIGDGVASRETESLVATALAGFEGVGWR 457 Query: 412 KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ 471 +VSEAGASVYSASE+AA+E PD+DVSLRGAVSIARRLQDP+AELVKI+P+SIG+G YQ Sbjct: 458 --VVSEAGASVYSASEIAAKELPDIDVSLRGAVSIARRLQDPMAELVKIEPQSIGIGLYQ 515 Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQ 531 HDV + +LA L A VE V VG +LNT+S LL+R+ GL +A IV R E G+F+ Sbjct: 516 HDVKEKELADALTATVESAVANVGANLNTSSQSLLSRIPGLGPSLAAKIVRHRSERGRFR 575 Query: 532 NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 R L ++ +G K +EQ GFLR+ + L+ ++VHPE+Y + +++L ++ + +++ Sbjct: 576 ERAALKTIAGVGAKTYEQIIGFLRVPDAKDALERTSVHPESYHIAKKLLKMLERDVAEVI 635 Query: 592 G-----------NSSELRNLKASDFTDE-----------KFGVPTVTDIIKELEKPGRD- 628 ++ + K D+ K T+ DI EL PG D Sbjct: 636 DLTASDAGDTSMDALKRLKPKLKALRDDVKDLEARAARLKCHPLTLKDIANELSAPGDDA 695 Query: 629 PRPEFKTAQFADGVETMNDLQPGMILE-GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 + T+ DLQ G ++ V NV FG F+D+GV +D L+H++++ + Sbjct: 696 RGQAAEQNVLRTQALTLEDLQTGAEIKNAVVRNVVPFGCFLDLGVGRDALLHVTAMRKRT 755 Query: 688 VE------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 DPH + + G V+V VD+ R+RIA+ + Sbjct: 756 DANPNAQIDPHALYRVGQTCAVRVKSVDIARQRIAVEL 793 >UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S0I4_TRIAD Length = 796 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 225/784 (28%), Positives = 362/784 (46%), Gaps = 73/784 (9%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + + +A QA V A+ LL EGNTVPFI RY+ + G++D ++ + Sbjct: 14 YIKRLAQRYQANEVAVKNAIALLREGNTVPFIVRYKSSMIQGINDINIQQIRNDYEDFIL 73 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEAGLE 124 L+E + + + + G LT L + ++ S E+++L +K + A + GL+ Sbjct: 74 LQEESKKLKTRLQKSGALTLQLEQELDRAESVEEIKELAKQFKTTPTGSLADRAKKLGLD 133 Query: 125 PLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 LA LL + +V ++ D +G+A + +G ++IL A+++ + V Sbjct: 134 KLATLLLENK--IDQVNFKSWIKRDTQGLASIEEIQNGVKHILANVIAKNSNCRSYVGK- 190 Query: 184 LWKNAHLVSTVVS---GKEEEGAKFRD----YFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 L+KNA + S + S ++ F + Y + ++ V H+ LA+ RG E +L Sbjct: 191 LFKNAEITSFLSSTTIKQQMHNPSFDNVLERYSNFQRKVTHVLPHQVLALNRGEREKILT 250 Query: 237 LSLNADPQFDEPPKESYCEQII-MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETEL 295 + + AD + E +I + ++ + V + Sbjct: 251 VKIKADFKAQEKFCTWARNEIFPFVPKRKDVERIFNEATKDAFVRLLQPAEERRIRVVIA 310 Query: 296 MGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDA----TGKL 351 + +A+ A+++F +NL +L+ + +G+DPG + G K+A++D TG++ Sbjct: 311 RRNLTCQAQKAAVSIFTQNLRRMLLTPSVSGKVILGIDPGYKNGCKLAIIDKLGVITGEV 370 Query: 352 VATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV--QKQFPKVT 409 + IY H + ++A T+ L + L+AIGNG A R+ E ++ ++ F Sbjct: 371 LHATIIYIHDARISEAEATLVNLVQGFKCSLIAIGNGCACRDVETLLSNLTSRRAFNFQK 430 Query: 410 AQKV-----IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKS 464 + V+E+G+S YS SEL E P L +LR AVSIARRLQ+PLAE+ K++PK Sbjct: 431 VKYCKMSFSFVNESGSSWYSISELGRAELPKLMPNLRSAVSIARRLQNPLAEMTKVEPKH 490 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWR 524 +GVG YQHD+ L + + V+E CV+ VG+D NTA V +L VAGL A+ IV +R Sbjct: 491 LGVGMYQHDIPDKLLEKAVKGVLEACVSFVGIDCNTADVTMLQHVAGLNLKCAKAIVEYR 550 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH-------------------------- 558 ENG NR+QL K+ +GPK FEQCAGFLRIN Sbjct: 551 KENGPLCNREQLKKIKGIGPKTFEQCAGFLRINPASYEENLSNYTSLTVSTSSGKRKIST 610 Query: 559 --------------GDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR---NLK 601 N LD + +HP+ YP + L + D+ + L Sbjct: 611 DSSIVARKKQRIIAESNKLDMTIIHPDNYPSALKFLRYLGATMDDIGDQKLIEKVTLQLN 670 Query: 602 ASDFTDEKFGVPTVTDIIKEL-----EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 F + + +D+ K L + D R ++ F + ++ + G IL G Sbjct: 671 IPGFEALQKCLGIDSDVFKNLCDALQQNLDFDIRSDYDEPVFRSSIISLQSIVNGTILTG 730 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD-LQRKRI 715 V NVT FG FVD G+ DG++ I E + GD VKVKV V + KRI Sbjct: 731 CVRNVTTFGIFVDCGLGTDGMIRIGEEVITQSESEKRPLGPGDRVKVKVKRVSGVNNKRI 790 Query: 716 ALTM 719 L + Sbjct: 791 LLEL 794 >UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing protein 1 n=5 Tax=Amniota RepID=Q497V5-2 Length = 611 Score = 540 bits (1392), Expect = e-152, Method: Composition-based stats. Identities = 221/623 (35%), Positives = 314/623 (50%), Gaps = 72/623 (11%) Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDH 211 +A K LD R + R+ + LAKV + E+E KF+ Y + Sbjct: 2 IAKDKDTLDFIRGLCKHRYICIQSSLAKV------------SSKKVNEKEVDKFQLYQNF 49 Query: 212 HEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLR-LNNAP 270 + T+ H+ LA+ RG N +L + +N + K +C I + R Sbjct: 50 SCNIRTIHHHQILAINRGENLKILTVKVNI----SDGVKNEFCRWCIQNRWRPRGFARPE 105 Query: 271 ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATM 330 + +++ ++ L E + AE +++ +F +NL LL+ +P R M Sbjct: 106 LMKILHNSLDDSFKRLIVPLLCREFRAKLTSDAEKQSVMMFGQNLRQLLLTSPVPGRTLM 165 Query: 331 GLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTA 390 G+DPG + G K+A++ T +++ TD +Y H GQ + A + L N V IGNGTA Sbjct: 166 GVDPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKRLLLHFNCRTVVIGNGTA 225 Query: 391 SRETERFYLDVQ--KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIAR 448 RETE ++ D+ F + IVSEAGAS+YS S A +E P LD +LR AVSIAR Sbjct: 226 CRETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIAR 285 Query: 449 RLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR 508 R+QDPLAELVK DPK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S LL Sbjct: 286 RVQDPLAELVKFDPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRH 345 Query: 509 VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG--------- 559 +AGL A+NI+ WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 346 IAGLNANRAKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFVRINQDYIRTFCSQH 405 Query: 560 ------------------------------DNPLDASTVHPEAYPVVERILAATQQALKD 589 NPLD + +HPE+Y + R L+ + + Sbjct: 406 TDSSGQSQETAMVTNEKLGKKKNKADATLIPNPLDQTCIHPESYDIAVRFLSFIGGTMCE 465 Query: 590 LMGNSSELRNLKAS------DFTDEKFG--VPTVTDIIKELEKPGR-DPRPEFKTAQFAD 640 +G + + S + T E+ V T+ II L +P D R +F F Sbjct: 466 -IGKPEMQQKINVSLGKEGIEETAERLQTTVHTLQVIIDGLSQPKTFDIRTDFDKPDFKR 524 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV----VK 696 + + DLQ G +L G V N T FG FVDIGV + GL+ I ++ + + Sbjct: 525 SIVCLEDLQVGTVLTGKVENATLFGVFVDIGVGKAGLIPIRFITEAKLSKTKRRRSLGLG 584 Query: 697 AGDIVKVKVLEVDLQRKRIALTM 719 G+ V+VKVL VD+ R RI+L + Sbjct: 585 PGEKVEVKVLNVDIPRSRISLDL 607 >UniRef50_Q4DZK1 Transcription modulator/accessory protein, putative n=4 Tax=Trypanosoma RepID=Q4DZK1_TRYCR Length = 986 Score = 535 bits (1378), Expect = e-150, Method: Composition-based stats. Identities = 217/701 (30%), Positives = 349/701 (49%), Gaps = 46/701 (6%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + + RII + P V +G+TVPF+ARYR++ TG LD+ LR L Sbjct: 40 IAQERLYRIIGARMSISPAIARFVVEQTKKGSTVPFLARYRRDETGHLDEKALRQLIDMA 99 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 L+E++ RR +LKS+ +G LTD+L +A + L +LED + P+K K+ + E Sbjct: 100 EELQEVQRRRAFMLKSLKSRGLLTDELREAFDKLLHLNQLEDAWEPFKEKKTSLSYRGRE 159 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 AGLEPLA L +V+ + + K + I++E + + Sbjct: 160 AGLEPLAKKLLYTSEPLTDVS--------EKLRSVKDGAKLFQAIIVEEVQRCDEVRQLM 211 Query: 181 RDYLWKNAHLVSTVVSGKEEE-------------GAKFRDYFDHHEPLSTVPSHRALAMF 227 ++ + S++ + ++ KF Y + + + +H LA+ Sbjct: 212 LAECRQSGVISSSLAAAPRKKNAKEIGTDAFETLKKKFAAYENRRWSVQRISAHNVLALQ 271 Query: 228 RGRNEGVLQLSLNADPQ-----FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWT 282 RG ++GVL + + + F ++ Q D RL N ++ + ++ T Sbjct: 272 RGESKGVLLVKMIPHSRSKYTFFSWARRKFVGFQRREDPKATRLLNQCLEAAYENIMKAT 331 Query: 283 WRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKV 342 I + +++ AE EAI VFA +L +LM P + +DPG+ GVK Sbjct: 332 HNI---------IRRDLKKSAEKEAITVFAHSLRHILMQCPMRNARILAMDPGVTKGVKC 382 Query: 343 AVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ 402 +D G ++ A ++ +K + + IGNGTASRE D Sbjct: 383 VALDENGGVLTR--FKCIIMDKANMRDYISGCVDKLKLNKIVIGNGTASREVADIVADTI 440 Query: 403 KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDP 462 ++ ++ + IVSEAGASVYS S++A +EFP LD RGAVSI RR+ DPL+ELVKI Sbjct: 441 EE-RGLSVEYAIVSEAGASVYSVSDVAREEFPTLDPMYRGAVSIGRRVIDPLSELVKIPV 499 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVA 522 +S+G+G YQHD+S+ +L R L+ VVE CV VGV+ ++ ++ ++ G+T+ + IV Sbjct: 500 RSMGIGMYQHDISEMELLRALNRVVESCVTCVGVNALISNRYVMEKIPGVTKSIVDQIVL 559 Query: 523 WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAA 582 R + ++R+ L +V + ++Q AGF R + NPLD + +HPE+Y V+++L Sbjct: 560 ARYAK-KLKSREDLRRVPGMTEVTYQQVAGFFRFPNSTNPLDNTNIHPESYSTVQKLLEL 618 Query: 583 TQQALKDLMGNSSELRNLKASDFTDEK----FGVPTVTDIIKELEKPGRDPRPEFKTA-Q 637 + + +GN NL+ ++ D G T+ + +EL P DPR E A Sbjct: 619 YEGKERREVGNILL--NLRDAELRDVASRIGCGEATLELVARELASPALDPRSELPHAGI 676 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 F + DL+PG +L G V +VT FGAFVD+G+H + LV Sbjct: 677 FRRFPPKLADLKPGDMLRGIVQSVTTFGAFVDVGLHDNVLV 717 >UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS Length = 528 Score = 529 bits (1364), Expect = e-148, Method: Composition-based stats. Identities = 194/533 (36%), Positives = 290/533 (54%), Gaps = 24/533 (4%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + D +A E+ R QV A LL EG TVPFIARYRKE LD+ +R+ E Sbjct: 13 VQEDELAERVARELHIRTAQVTAVRSLLKEGCTVPFIARYRKEAHHCLDEVLIRDCERLF 72 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 E RR I++++ ++G LT L + + + + LEDL+ P+K K++TRG AIE Sbjct: 73 HTHLARETRRLEIIRAVFKEGMLTPTLYEHLRSAPTLAALEDLWAPFKKKKKTRGMQAIE 132 Query: 121 AGLEPLADLLWSDPSHTPEVA------AAQYVYADKGVADTKAALDGARYILMERFAEDA 174 GLEPLA L+ + + E+ A +D+ V+ + A+ GA IL E A Sbjct: 133 KGLEPLARLIETQCATQAEIERAAAALVAPAADSDRAVSSAQDAIAGACDILAEETAHCN 192 Query: 175 ALLAKVRDYLWKNAHLVSTVV-SGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 A A ++ + + +T + + ++ Y+D+ E + + +HR LA+ RG EG Sbjct: 193 ANRAALKSFYLSAGVVTATGIGDAHAAHTSVYQMYWDYAEAVRDIKAHRVLAINRGEREG 252 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 +L + + D + P + + + ++ + + Sbjct: 253 ILDVKITVDLDAAVEQVQEAV--------------HPNNRYHRDAITDGVVRLLSPAVLR 298 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 E+ + AE INVF+ NL +LLM P +G+DPG+RTG K A +D TG+ + Sbjct: 299 EIRADLTASAEQHGINVFSENLTNLLMTQPVKGTRVLGIDPGIRTGTKCAALDETGQYLG 358 Query: 354 TDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 + IYPH A+AA + +++ ++LVA+GNGT S + + + Sbjct: 359 SFVIYPHNTDHARAA--LTQALDRYRIQLVAVGNGTGSHAVQELIASIISETHSA-VAFT 415 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +V E GASVYSA ++A +EFPDLD+++RGA+SI RRLQDPLAELVKIDPKSIGVG YQHD Sbjct: 416 VVEEDGASVYSAGDIAREEFPDLDLTIRGAISIGRRLQDPLAELVKIDPKSIGVGLYQHD 475 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE 526 V+Q +L+ +L AVV+ VN+VGV+LNTASV LL V+G+ +A+ IV R Sbjct: 476 VNQKKLSEELHAVVDAVVNSVGVNLNTASVSLLKHVSGVNSALAKRIVHHRAT 528 >UniRef50_Q4QH24 Transcription modulator/accessory protein, putative n=3 Tax=Leishmania RepID=Q4QH24_LEIMA Length = 1082 Score = 529 bits (1362), Expect = e-148, Method: Composition-based stats. Identities = 221/740 (29%), Positives = 344/740 (46%), Gaps = 72/740 (9%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + R + + V + EG TVPF+ARYR+ TG +D+TQLR + + Sbjct: 105 EETYRQTSERLLLPLNAVRFVLTQAKEGATVPFLARYRQGETGRMDETQLRLVMDTAKEV 164 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 E+ RRQ +L+S+ +G LT L A+ + + ++LED + PYK +R + AGL Sbjct: 165 AEVHRRRQFMLRSLESRGLLTPALQTALESMVHVSQLEDAWEPYKERRTSLASRGRAAGL 224 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGAR---YILMERFAEDAALLAKV 180 P AD L P+ A D+ A + +G R I+ E L ++ Sbjct: 225 GPYADALLHFNPDDPDCKAR----LDELSAFVRRTDEGERLLTAIVAEDVQRSEVLRRRL 280 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAK-------------FRDYFDHHEPLSTVPSHRALAMF 227 +Y A L ST+++ ++ AK F Y + + V +H LA+ Sbjct: 281 GEYCRHTARLSSTLMAKPRKKAAKELHEESFEALRKHFAYYDNKSWSVQRVAAHVVLALQ 340 Query: 228 RGRNEGVLQLSLNADPQ----FDEPPKESYCEQI-----------IMDHLGLRLNNAPAD 272 RG +G L++ + P+ F +E Y D G + Sbjct: 341 RGEAKGALKVDTGSGPKSHGLFMHTVREQYPSLNRLLSLSSSSVPTADGAGAYSHVFRDF 400 Query: 273 SWRKGVVSWTWRI---KVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRAT 329 + + +V + ++ + +++ AE EAI VFA NL +L+ P Sbjct: 401 GYGRKIVHAGLQAAYDHIIKQAHFAIRRDLKKSAEQEAIVVFAHNLQHMLLQRPLSRSRI 460 Query: 330 MGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGT 389 + +DPGL GVK +D G + T K V + E + + IGNGT Sbjct: 461 LAMDPGLANGVKCVALDENGAVETFFT--CTLMDEQKMRRYVIQVVESRKLNKIVIGNGT 518 Query: 390 ASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARR 449 AS D+ KQ + +VSEAGASVYS S++A +EFP+LDV RGAVSI RR Sbjct: 519 ASGRVTDLIADLIKQQKWTDVEFAVVSEAGASVYSVSDIAKEEFPNLDVMYRGAVSIGRR 578 Query: 450 LQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRV 509 + DPL+ELVKI +S+G+G YQHDV++ +L R+L V+E CV VGV+ +A+ ++ +V Sbjct: 579 VLDPLSELVKIPVRSMGIGMYQHDVNEKELMRELSYVLESCVAKVGVNAASANRYVMEKV 638 Query: 510 AGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVH 569 G+ + + IV R + +R+ L +V + +EQ AGF R + PLD +++H Sbjct: 639 PGIKKRIVDQIVLARHAK-KLHSREDLRRVPAMTESVYEQIAGFFRFPNSPEPLDNTSIH 697 Query: 570 PEAYPVVERILAAT-------QQALKDLMGNS---------------------SELRNLK 601 PE+YP+V R++ +A+ + GN+ + + Sbjct: 698 PESYPLVRRLVTFYTAGQLGDGEAMAEKPGNAADGAATTLGDAHIRQQVAQQLERMSPAQ 757 Query: 602 ASDFTDEK--FGVPTVTDIIKELEKPGRDPRPEFKTA-QFADGVETMNDLQPGMILEGAV 658 + EK V T+ + +EL PG DPR A V + +L+ G +L G V Sbjct: 758 LASLATEKLSCSVETLELLRQELLHPGLDPRASLPHAGLLRRDVCDVQNLRSGELLSGVV 817 Query: 659 TNVTNFGAFVDIGVHQDGLV 678 +VT FGAFVD G+H L+ Sbjct: 818 QSVTMFGAFVDCGLHDSVLL 837 >UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory protein (S1 rna binding domain) n=1 Tax=Schistosoma mansoni RepID=C4QCZ5_SCHMA Length = 873 Score = 520 bits (1340), Expect = e-146, Method: Composition-based stats. Identities = 194/622 (31%), Positives = 301/622 (48%), Gaps = 67/622 (10%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M +A V + + + G TVPFIARYRKEITGG + T L L+ +++ Sbjct: 1 MEIDLTTQVAEAANIDRNLVSRVIPMFENGYTVPFIARYRKEITGGAEPTVLHRLKEKMN 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKR-RTRGQIAIE 120 + L ++ + L+ + G LT++L++ + + +++ L P+K K RT A Sbjct: 61 DCKMLVDKIEKSLQFFDKSGLLTNELSQQLMKCKTTEDIKLLGNPFKSKGPRTLAGRAKA 120 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 LEP+A + + ++ + A K A D +I+ + FA+D ++ K Sbjct: 121 VNLEPIALDIL-HSNRCVDMYSLAPPEAKKTFTSKTALEDAVSHIIADIFAKDLDIIRKA 179 Query: 181 RDYLWKN-AHLVSTVVSG------------------------------------------ 197 + K A LV+ S Sbjct: 180 EELCSKYIATLVTAKKSKRGKKVEQSSGGNLPNSMSIDFDENENADDAECIQNSHSSMNN 239 Query: 198 -----KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES 252 K+++ F++Y + P+S++ +H+ LA+ R GV+ + ++ PQ Sbjct: 240 TNNNSKKDDLVTFKNYLNFSRPVSSILAHQVLAINRANERGVITVKIHLSPQVQHN---- 295 Query: 253 YCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFA 312 C + N D + + W+ + HL + + A+D ++ VF+ Sbjct: 296 -CATFVSQKYFPTTNRIHWD-FVMSAFNDAWKRLIDPHLVRSIRTKLTTSAQDASLEVFS 353 Query: 313 RNLHDLLMAAPAGLR-ATMGLDPGLRTGVKVAVVDATGKLVATDTIYP--HTGQAAKAAM 369 NL LLM AP R +GLDPG R G K A D G +++T ++P + Sbjct: 354 ENLRRLLMTAPLRDRLPVIGLDPGWRNGCKWAACDPHGNVLSTGILWPPHTLSAIPPKKL 413 Query: 370 TVAALCEKHNVELVAIGNGTASRETERF--YLDVQKQFPKVTAQKVIVSEAGASVYSASE 427 +V +N A+GNG SR+T + YL + F + + +VSE GAS YSAS+ Sbjct: 414 SVQNGPMSNN----ALGNGQGSRQTGSWLAYLIQIQHFKPLNVRYAVVSECGASYYSASK 469 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 +A E PDLDVS RGAVSIARRLQDPLAELVK++PK +GVG YQHD+ QL + V+ Sbjct: 470 VACTELPDLDVSFRGAVSIARRLQDPLAELVKLEPKHLGVGMYQHDIPVNQLTSAVHNVM 529 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 E+C++ VGVDLN A + +L+RVAGL+ M A+ I+ +R + G F++R LLKV +G F Sbjct: 530 EECISFVGVDLNAAPLHILSRVAGLSEMKAKAILTYRSQVGPFRSRADLLKVKGIGQATF 589 Query: 548 EQCAGFLRINH--GDNPLDAST 567 QCAGF+R+ LD + Sbjct: 590 AQCAGFVRVKPTYSTTTLDGTK 611 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 34/191 (17%) Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNS----------SELRNLKASDFTDEKF 610 NPLD + VHP++Y V I++ Q L D+ SE R+ + F + Sbjct: 676 NPLDQTAVHPDSYEVAANIISLLQLNLTDVGSMKMRTAATQFMISEDRDKRLEQFCSKTV 735 Query: 611 GVPTVTDIIKELEKP-GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 G+ T+ DI+ L +P D R + T F V ++DL+ GM ++G V NVT FGAF D Sbjct: 736 GLDTLRDILVALTRPLDFDERQDCFTPLFHSTVMKISDLRKGMQVKGRVENVTTFGAFCD 795 Query: 670 IGVHQDGLVH-----------------------ISSLSNKFVEDPHTVVKAGDIVKVKVL 706 IGV ++ + I + ++ GD +K V Sbjct: 796 IGVEENAYIPRHEYPRNCSTSNLKIASETSTTGIGVSDGGDIHHKMFTLRLGDRIKATVS 855 Query: 707 EVDLQRKRIAL 717 VD++ KR+AL Sbjct: 856 GVDIKYKRVAL 866 >UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SQL1_TETNG Length = 613 Score = 497 bits (1280), Expect = e-139, Method: Composition-based stats. Identities = 203/612 (33%), Positives = 289/612 (47%), Gaps = 92/612 (15%) Query: 196 SGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCE 255 K+++ KF+ YFD + + H+ LA+ RG + +L + +N + K + Sbjct: 1 KNKDKDIDKFQLYFDFTCNVQRIQPHQTLAINRGESLKILTVKVNIP----DRVKSDFSS 56 Query: 256 QIIMDHLGLRL-NNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARN 314 I ++ A K V +++ VL L + AE E+I +F RN Sbjct: 57 WCINSRWRPKIIPKAEHQLIIKNAVEDSYKRLVLPFLTRSYRTKLTAAAEKESIAMFVRN 116 Query: 315 LHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAAL 374 L L+ P MG+DPG + G KVA++ T +++ TD +Y H A + L Sbjct: 117 LRQRLLVGPVRGSVIMGVDPGYKHGCKVAILSPTSQILHTDIVYLHHSSQQSQADKLRHL 176 Query: 375 CEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQK-------------------- 412 K++ + IGNGTA RETE ++ + + F + Sbjct: 177 IVKYSCTRIVIGNGTACRETEAYFSQLISRRLFHPLDVSYWTAQDYRHVALHQEASIDFE 236 Query: 413 ------------VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI 460 I +EAGAS+YS S A +E P+LD +LR AVSIARR+QDPLAELVKI Sbjct: 237 TVRVHDLTILPLSITNEAGASIYSVSPEAVKEMPELDPNLRSAVSIARRVQDPLAELVKI 296 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNI 520 DPK IG+G YQHDVS + L LD VV++CV+ VGVD+N S L+ VAGL A++I Sbjct: 297 DPKHIGIGTYQHDVSSSALKAALDGVVQECVSFVGVDINMCSETLMRHVAGLNAGRARSI 356 Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN----------------------- 557 WR++NG F NR+QL V +GPK ++QCAGF+RIN Sbjct: 357 AEWREQNGPFINREQLKLVKGMGPKTYQQCAGFIRINPQTSVLFFFFVFSNSANSSLPQV 416 Query: 558 ------------------HGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 NPLD + +HPE+Y VV+R L+ + R Sbjct: 417 PENPAAKKGKGKACVKVSTSFNPLDQTCIHPESYHVVQRFLSIVGGRADPIGSPRLRQRV 476 Query: 600 LKA-------SDFTDEKFGVPTVTDIIKELEK-PGRDPRPEFKTAQFADGVETMNDLQPG 651 T+ II L + PG D R F A F G+ +M+DL+ G Sbjct: 477 EDKVRSSSVEELARTADTSPETLKLIIDGLTQPPGFDIRQNFGQADFKQGIVSMSDLRVG 536 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV----EDPHTVVKAGDIVKVKVLE 707 +L G V N FGAFVDIGV + GL+H S+++ + + G+ V+V+VL Sbjct: 537 AVLTGRVDNTALFGAFVDIGVGRSGLIHKSNITPDKLPISQRRRSLALGPGERVEVRVLN 596 Query: 708 VDLQRKRIALTM 719 VD QR RI L + Sbjct: 597 VDHQRGRIGLDL 608 >UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q9N4L5_CAEEL Length = 745 Score = 481 bits (1238), Expect = e-134, Method: Composition-based stats. Identities = 192/762 (25%), Positives = 333/762 (43%), Gaps = 75/762 (9%) Query: 1 MMNDSFCRIIAGEIQ-ARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 ++ I E+ Q V L G +IARYR ++ G L ++R Sbjct: 12 ILQFPIEYFIHKEVHELNSTQAQRLVSLFKNGCETAYIARYRGDVHGYLAPEKIRKAMEA 71 Query: 60 LSYLRELEERRQAILKSISEQGKLTDDLAKAINA-----TLSKTELEDLYLPYKP-KRRT 113 + L + + + +++ K+ K I E+ D+ Y R+T Sbjct: 72 YVDAKNLNNKVSSAISTVT--AKVAGAQEKIIVTERFKRCEEFDEVTDISKEYSTGTRKT 129 Query: 114 RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAED 173 + IA GLEP A + + + + K V D + L L+ R E Sbjct: 130 KANIARALGLEPPAQSILDGNFVDFKSLLSNGL---KTVKDVEEHLKICLADLINRDEEV 186 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEEG---------AKFRDYFDHHEPLSTVPSHRAL 224 + A + D L K + + + E+ K++++ + H Sbjct: 187 RKVSANI-DILKKECRVSAKLSREAEKNRKDLEKRGIIEKYKNFIGEKWNAEDIRDHTVS 245 Query: 225 AMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWR 284 A+ +G +EG++ + + + + + ++ + ++++ + Sbjct: 246 ALNKGFDEGIITWKIEC----------EFNDAKYIHPFSRKSVYFGMKNFYQEALAYSIK 295 Query: 285 IKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAV 344 + +E ++ ++++A+D +I +F N+ LL + + LDPG R+ +K A Sbjct: 296 NYFIPRIERKMANHLKDKAKDRSIVLFGENVDQLLSQEGIRDKFVIALDPG-RSKIKTAF 354 Query: 345 VDATGKLVAT--DTIYPH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLD 400 + TG++V +IY G + E+ ++ + AIGNGT + T+ D Sbjct: 355 LKPTGEVVDMSSFSIYGTRFDGGGVDLLKKWSQQTERKDI-VFAIGNGTNTYNTQIAVSD 413 Query: 401 VQKQF---PKVTAQKVIVSEAGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQDPLAE 456 + ++ IV E GAS YS + A +EF + +++ AVSI RRL DP++E Sbjct: 414 MINSNVFPKEINVSYCIVPEHGASKYSCTPSAIEEFGENAEITEISAVSIGRRLIDPMSE 473 Query: 457 LVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMM 516 VKI+P+ +G GQYQ V +L L VV D V+ GVDLNTAS LL R+ GL Sbjct: 474 YVKIEPQHLGKGQYQLSVDPKKLNESLLNVVRDRVSFNGVDLNTASKNLLQRINGLNEKT 533 Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------------- 560 A+ IV +R++NG+F++R +L +V +G F+QCAGFL ++ D Sbjct: 534 AKEIVQYREQNGRFRSRAELKEVKGIGALTFQQCAGFLTVSRPDDAEDGPPKKKFKKSST 593 Query: 561 ----NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 NP D + VHP+ Y E +L +++D+ G +++ S T E+ V + Sbjct: 594 SKEWNPFDETIVHPDDYRTGESLLGKLNVSIEDITG---RIKSFSISRLTAEEAKVLNLL 650 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 + L+ + P P V + DL G G V+N T+FG F+DIGV QDG Sbjct: 651 QNLT-LKTKMKPPPP------LRTKVGQIRDLAEGQRFTGTVSNKTDFGVFIDIGVGQDG 703 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 L HIS + + D V+V + ++ + +I+L+ Sbjct: 704 LAHISHFKDGHYS--LMLPSVNDSVEVVIDKI-REDGKISLS 742 >UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7_HUMAN Length = 514 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 194/504 (38%), Positives = 267/504 (52%), Gaps = 64/504 (12%) Query: 279 VSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRT 338 ++ +++ + L E + AE E++ +F RNL LL+ +P R MG+DPG + Sbjct: 8 LNDSFKRLIYPLLCREFRAKLTSDAEKESVMMFGRNLRQLLLTSPVPGRTLMGVDPGYKH 67 Query: 339 GVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 G K+A++ T +++ TD +Y H GQ + A + L N V IGNGTA RETE ++ Sbjct: 68 GCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVIGNGTACRETEAYF 127 Query: 399 LDVQ--KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE 456 D+ F + IVSEAGAS+YS S A +E P LD +LR AVSIARR+QDPLAE Sbjct: 128 ADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRVQDPLAE 187 Query: 457 LVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMM 516 LVKI+PK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S LL +AGL Sbjct: 188 LVKIEPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIAGLNANR 247 Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG----------------- 559 A+NI+ WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 248 AKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSQQTETSGQIQ 307 Query: 560 -------------------------------DNPLDASTVHPEAYPVVERILAATQQALK 588 NPLD + +HPE+Y + R L++ L Sbjct: 308 GVAVTSSADVEVTNEKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDIAMRFLSSIGGTL- 366 Query: 589 DLMGNSSELRNLK--ASDFTDEKFG------VPTVTDIIKELEKP-GRDPRPEFKTAQFA 639 +G + + EK V T+ II L +P D R +F F Sbjct: 367 YEVGKPEMQQKINSFLEKEGMEKIAERLQTTVHTLQVIIDGLSQPESFDFRTDFDKPDFK 426 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN----KFVEDPHTVV 695 + + DLQ G +L G V N T FG FVDIGV + GL+ I +++ K + + Sbjct: 427 RSIVCLEDLQIGTVLTGKVENATLFGIFVDIGVGKSGLIPIRNVTEAKLSKTKKRRSLGL 486 Query: 696 KAGDIVKVKVLEVDLQRKRIALTM 719 G+ V+V+VL +D+ R RI L + Sbjct: 487 GPGERVEVQVLNIDIPRSRITLDL 510 >UniRef50_C5KAX6 Tex protein-relatedtranscription accessory protein, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAX6_9ALVE Length = 1632 Score = 454 bits (1168), Expect = e-126, Method: Composition-based stats. Identities = 195/634 (30%), Positives = 284/634 (44%), Gaps = 81/634 (12%) Query: 109 PKRRTRGQIAIEAGLEPLADLLWSDPSH---------TPEVAAAQYVYADKGVADTKAAL 159 KR+T+ Q AI+AG P AD++ S T ++ V A + D +AA Sbjct: 8 TKRKTKAQAAIDAGFGPAADVILSAAGQASPGGCLMRTDQLRRQAQVAASEEETDVEAA- 66 Query: 160 DGARYILMERFAEDAALLAKVRDYLWKNAHL------------VSTVVSGKEEEGAKFRD 207 IL R A D + + R L A L + ++ ++ Sbjct: 67 --VVAILTYRLAHDQEVRSICRSMLASRARLEVKGIVKRTSTPKGKIKVKPKQPKQQYSS 124 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD--PQFDEPPKESYCEQIIMDHLGLR 265 Y L V H LA+ RG L++ + Q +E Y Sbjct: 125 YGGLKRRLDRVKPHEWLAIKRGEAAKELRVKIVFPATTQLYGCLQERY------------ 172 Query: 266 LNNAPADSWRKGVVSWTWRIK---VLMHLETELMGT-VRERAEDEAINVFARNLHDLLMA 321 L + ++ R + L E + AED AI F N+ LM Sbjct: 173 LASGHGTCLCAKMIPTVIRRTVDTIEKSLAREFRSERLTVPAEDFAIKTFTDNVSVKLMC 232 Query: 322 APAGLR---ATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA------------- 365 P + +G+DPG G K V+ ATG+++ + G A Sbjct: 233 PPIRVEKDATVVGVDPGYVNGHKCVVISATGEVLDMFKFWTRPGGARWGPEITCIVWIAG 292 Query: 366 KAAMTVAALCEK---HNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 +A+ L +K LV +G+G S E V P + +V E GAS+ Sbjct: 293 SSALGPEQLVQKVSQWTCSLVVVGDGQGSAEAVESIRRVLP--PHMNVGICVVDECGASI 350 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSA +AA E PD+D+S RGAVSIARR+ DP+AE VK++PK+IGVG +QHD+ QL Sbjct: 351 YSAGAVAAAELPDMDISFRGAVSIARRVLDPIAEYVKLEPKNIGVGLFQHDMPPKQLDSA 410 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L ++ CV VGVDLNTASV LL VAGL A+ IV +R NG+F R++L KV + Sbjct: 411 LTQAIQWCVCQVGVDLNTASVQLLRYVAGLNAGTAKRIVEYRTSNGRFTCREELKKVKGI 470 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL-- 600 G F+Q AGF+R+ G PLD++ +HPE+Y ++ ++ ++ G S+L +L Sbjct: 471 GAAVFQQAAGFIRVYDGSEPLDSTGIHPESYDCARQL----KRLIETHRGEGSDLNSLLQ 526 Query: 601 KASDFTDEKFGVPTVTDIIKE---------LEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 S D + T +++ E LE P R PE + + G L+ G Sbjct: 527 HVSCEEDSEQARTTSAEVLTELVGSDRDVRLEHPERYRPPEIEYPPYRSGCGITE-LEVG 585 Query: 652 MILEGAVTNVTNFGAFVDIGV--HQDGLVHISSL 683 LEG+V NV +FGAFV + GL+H+S+L Sbjct: 586 AHLEGSVKNVVSFGAFVHLDCAESVTGLIHVSNL 619 >UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692A0D Length = 446 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 155/414 (37%), Positives = 234/414 (56%), Gaps = 19/414 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I+ E+ P +V A LLDEGNT+PFIARYRKE+TG +D+ QLR++E RL YLR Sbjct: 47 RIQKQISTELALTPGKVKTATALLDEGNTIPFIARYRKEMTGEMDENQLRSIEERLQYLR 106 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE+R+ +++ I EQGKLT +L AI + ++EDLY PY+ KR+TR +A E GLE Sbjct: 107 NLEDRKLEVIRLIDEQGKLTAELHSAIEQAVKLQDVEDLYRPYRQKRKTRASVAKERGLE 166 Query: 125 PLADLLWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA + P + A +Y+ DKG+ A+ GA I+ E A++A + A VR Y Sbjct: 167 PLAGWMLKQPKQGSLAEEAEKYINEDKGILSAADAVQGAMDIIAENIADNAKVRAWVRKY 226 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + ++E + + Y+ + EP+ +P HR LA+ RG EG L+++L P Sbjct: 227 TRDEGIFRTEAKDAEQE--SVYEMYYAYDEPVKRMPPHRILAINRGEREGFLKVNLEVAP 284 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPA--DSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 I ++G +L P+ + + VV ++ + +E E+ G + E Sbjct: 285 D------------RIHQYMGRQLIQGPSVVQNELEEVVQDAYKRLISPSIEREVRGEMTE 332 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RAE+ AI +FA NL +LL+ P + +G+DP RTG K+AVVD TGK++ YP Sbjct: 333 RAEEHAITIFAANLRNLLLQPPVRGKTVLGVDPAFRTGCKLAVVDETGKMLEIAVSYPTP 392 Query: 362 G--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 + +A + L ++H VEL+ IGNGTASRETE+F D+ ++ + Q + Sbjct: 393 PYSKVEEAKTILKQLIQRHGVELIVIGNGTASRETEQFVADLIREMKEANLQYL 446 >UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root RepID=A8WJL4_CAEBR Length = 809 Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats. Identities = 201/827 (24%), Positives = 350/827 (42%), Gaps = 121/827 (14%) Query: 1 MMNDSFCRIIAGEI-QARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 ++N + E+ + + + L EG +IARYR+++ GGL ++R + Sbjct: 12 ILNKPIEDFVLKEVRELTFNRARGLIALFKEGCETAYIARYREDVHGGLSPEKIRKAKDT 71 Query: 60 LSYLRELEERRQAILKSISEQGKLTD-----DLAKAINATLSKTELEDLYLPYKP-KRRT 113 L + + + +I+ GKLT + + + E+ D+ + P R+T Sbjct: 72 YLAAVHLNSKVASSITTIT--GKLTGLDEKRAVTERLKGCDDMEEVSDITKEFAPGSRKT 129 Query: 114 RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAED 173 + IA GLE A + + K V D + + L+ + E Sbjct: 130 KANIARGLGLEGPALKVLNGEFVDFCSLIT---REMKTVRDVEENMKALVADLINKDEEV 186 Query: 174 AALLAKVRDY-----LWKNAHLVSTVVSGKEEEGAK-----FRDYFDHHEPLSTVPSHRA 223 + K+ + + L V E E K +R+ + SH Sbjct: 187 RKIALKIVKLQTNVRMTVTSKLTREVEKKIETEAVKKVRERYREVIGLTRTAYHIMSHTV 246 Query: 224 LAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTW 283 A+ RG EGV+ + +P D + ++ + ++ ++ + ++ Sbjct: 247 SALNRGSEEGVIAWKVELNPS-DVTKMHPFQKKTVHRNM---------QNFFQSAYFYSI 296 Query: 284 RIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVA 343 + LE + + + +E+ +I VF RN+ + + + LDPG + VK A Sbjct: 297 NTYTVPMLERGVKRFLSKSSEERSITVFGRNVEQMFSQKGVHSKYVIALDPG--SIVKAA 354 Query: 344 VVDATGKLVATDTIYP--HTGQAAKAAMTVAALCEKHNVE---LVAIGNGTASRETERFY 398 ++ GK++ D + + K + +VA+GNG+ + T+ Sbjct: 355 FLEPNGKVIDMDQFSFSFRAPTFDSRGIEILKNWAKQTMGKDIVVAVGNGSNTYGTQTAV 414 Query: 399 LDVQKQF---PKVTAQKVIVSEAGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQDPL 454 + + ++ +V E GAS YS ++ A +EF D+D+ L AVSI RRL DP+ Sbjct: 415 STMIQNEAFPKEIDVCFCVVPEHGASKYSCTDAAREEFGEDVDIKLISAVSIGRRLIDPM 474 Query: 455 AELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTR 514 +E VKI+P+ +G GQYQ +++ L KL VV D V+ +GVDLN AS LL + GL Sbjct: 475 SEYVKIEPQHLGKGQYQLSINEKSLKGKLVDVVRDRVSLIGVDLNLASEALLRNICGLNS 534 Query: 515 MMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN------------- 561 A IV +R + G+F++R +L KV +G +F+QC+GFL ++ D Sbjct: 535 TTAAEIVKYRMQKGRFKSRAELKKVKGIGDVSFQQCSGFLTVSRPDELDQPAKKRFKTPD 594 Query: 562 ------PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 PLD +TVHP+ Y + ++++ ++ ++ + ++ ++ T E+ Sbjct: 595 GVAGWSPLDTTTVHPDHYGIALKLISKLNLTVEQIVSGA----DISFTNLTPEE------ 644 Query: 616 TDIIKEL-EKPGRDPRPEFKTAQ----------FADGVETMNDLQPGMILEGAVTN---- 660 +IIK L +KP P P F + +L+ + G VTN Sbjct: 645 EEIIKLLRDKPDLKPPPVMMVLAVSIPLNTCFFFQKKCRALKNLRVNEVFLGTVTNTVSS 704 Query: 661 -------VTNFGAFVDIGVHQDGLVHISSL-------------------SNKFV--EDPH 692 +T+FG FVDIGV +DGLVHIS+ SN FV DP Sbjct: 705 FSEAYLTITDFGVFVDIGVEKDGLVHISNYRKNNEQPKTKSSNNKNAPKSNTFVNKNDPE 764 Query: 693 TVVK----AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 K GD ++V + + + RI+L + +P ++ G Sbjct: 765 ADFKNVPSVGDQIEVIIQGI--KGDRISLVPIKEPKPQSSSFASGSR 809 >UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9U2_PHATR Length = 966 Score = 432 bits (1112), Expect = e-119, Method: Composition-based stats. Identities = 213/788 (27%), Positives = 330/788 (41%), Gaps = 128/788 (16%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 + S R++ AR + LL + + VPF+ RYR ++ L Q+ L+T S Sbjct: 58 DSSALRVVIARAAAR------TLPLLTDASAVPFVCRYRVDLVNPLTTRQVHLLQTLSSR 111 Query: 63 LRELEERRQAILKS--ISEQGK---LTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQI 117 L+ R +L++ ++ GK + + + SK ELED Y PYKP + Sbjct: 112 HASLQSVRAKVLRAAAVAHDGKGNAENEAWISKVQTSTSKAELEDWYAPYKPPSK----- 166 Query: 118 AIEAGLEPLADLLWSD-PSHTPEVAAAQYVYADKGVADTKAAL-----DGARYILMER-F 170 + D + +D P P++ A + + D+ L D ++L + Sbjct: 167 ------GSVLDRIQNDHPELIPQLDA--FWHGDQDSFSIHRILKQHPKDAVLHVLSTKLI 218 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEEEG---AKFRDYFDHHEPLSTVPSHRALAMF 227 A + +++ V++ LWK+A + + + + K+ Y D PLS + H+ LA+ Sbjct: 219 ANEPSVVETVQNELWKHAKIRTKPPASPSNDPAADQKYVVYHDFTAPLSRLRDHQILAIR 278 Query: 228 RGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV 287 RG + +LQLS D K C + + R +A + V Sbjct: 279 RGVEQKLLQLSYEVDGS-----KIEACMRYAVRRRWPRHGDALPANLLDEAVHEAPG--- 330 Query: 288 LMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG----------------LRATMG 331 VFA N L+A PA + Sbjct: 331 ---------------------QVFAENTSRALLAPPASRGGGSSGNNASSRASPPLYLLS 369 Query: 332 LDPGLRTGVKVAVVDATGKL-VATDTIYPHTGQAAKAA-MTVAALCE------KHNVELV 383 +DPG + G+K AV+D G + + T + G A T++ L + N +V Sbjct: 370 VDPGFQAGLKCAVLDVNGHVALQPLTTVKYLGNARTTGVRTMSTLLRDVADATQSNTVVV 429 Query: 384 AIGNGTASRETERFYLDVQK-QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRG 442 +GNG + E + K+ +V EAGASV+S +E A +EFP+ S Sbjct: 430 TLGNGHGTHEARDLLREAAAVATEKLELDIQVVHEAGASVWSVTEAAREEFPNDPPSAIA 489 Query: 443 AVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS 502 AVSI RR Q+PL EL+K+ P S+G+G YQHDV L L D AVGVD+NT Sbjct: 490 AVSIGRRWQNPLHELIKVPPASLGLGMYQHDVPPADLDDVLHRTSVDAAAAVGVDVNTCR 549 Query: 503 VPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL-KVSRLGPKAFEQCAGFLRINHGDN 561 V +L +V GL +A I+A R RQ LL +V+ LGPK F+ CAGFLRI G Sbjct: 550 VEILRKVPGL-AKLADAIMAAR----PLATRQDLLSRVTGLGPKTFQACAGFLRIVDGPE 604 Query: 562 PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK-----ASDFTDEKFGV---- 612 PLD + VHPE+Y +L L + N K + +FGV Sbjct: 605 PLDGTLVHPESYDTARWLLQTLSWDLLTVPTNLPPRAEWKSCWKDVLNAGSTQFGVSPER 664 Query: 613 --PTVTDIIKEL--------------EKPGRDPRPE-----FKTAQFADGVETMNDLQPG 651 + +++ L + G PR + A A + + P Sbjct: 665 MLSVLENLVDSLINVDPRLRQGNDTGSRRGASPRWDGSNCARLPAGLAHDLAALQAACPV 724 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 ++G V N+ +FGAFVD G DGL+HIS + V + G + + ++ V Q Sbjct: 725 RNVQGTVRNLADFGAFVDFGGPHDGLLHISQMMANRVA--LDTLLIGQGIGIDIVSV--Q 780 Query: 712 RKRIALTM 719 +++L + Sbjct: 781 DHKVSLAL 788 >UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ79_9PLAN Length = 1043 Score = 421 bits (1083), Expect = e-116, Method: Composition-based stats. Identities = 162/415 (39%), Positives = 233/415 (56%), Gaps = 15/415 (3%) Query: 181 RDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 R L + +E ++ F+DY+D+ EP+S +P HR LA+ RG +++ Sbjct: 297 RRALQEQRRDKRRKQKDRERSKKEKAFKDYYDYREPISKIPHHRVLAINRGDRTRFIRVK 356 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + D +D + I DH + K + + +L LE E+ Sbjct: 357 IECD--WDRLFALAEETAIPADH--------SQTDFLKPCLRDGLQRLMLPSLEREIRRE 406 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E AE+ A++VFA NL LL+ P R M +DPG R+G K+ +D G ++ I+ Sbjct: 407 LTEHAEEHAVDVFACNLRKLLLQPPVSSRRVMAIDPGFRSGCKLVALDQFGSILEQGVIH 466 Query: 359 P--HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ-KQFPKVTAQKVIV 415 + A+ + + +H V++VAIGNGTA RETE + K VIV Sbjct: 467 LIGPEDRVARGRQRLIEMIRQHAVDIVAIGNGTACRETENLVASIISKDITDREVVYVIV 526 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 +EAGASVYS SEL +EFPD D ++RG +SI RRL DPL+ELVKI+P +IGVG YQHDV Sbjct: 527 NEAGASVYSTSELGREEFPDFDATVRGTISIGRRLLDPLSELVKINPSNIGVGLYQHDVK 586 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 L LD VVE CVN VGVD+N AS LL+ V+GL ++ A+ + +R +NG F +R++ Sbjct: 587 SKHLKETLDNVVESCVNYVGVDVNQASPALLSYVSGLNQLTARRLYEYRRQNGPFTSREE 646 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 KV+ G AF Q AGFL+I G+NPLDA+ +HPE+Y V E++LA + + Sbjct: 647 FKKVAGFGESAFVQAAGFLKIRDGENPLDATWIHPESYEVAEKVLAKLDATIDQV 701 Score = 229 bits (585), Expect = 3e-58, Method: Composition-based stats. Identities = 90/206 (43%), Positives = 125/206 (60%), Gaps = 3/206 (1%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 I+A E+ +QV V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ R + LR+L Sbjct: 9 LSIVARELGLPVDQVQRTVELLDDGNTVPFITRYRKDETGGLDEEQIRKIQARSAALRQL 68 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 EER+Q ILKSI QGKLT+ LA I + LEDLYLP+KPK+++ A + GLEPL Sbjct: 69 EERKQTILKSIESQGKLTEKLADKIQKAPTTKLLEDLYLPFKPKKQSLATQARQRGLEPL 128 Query: 127 ADLLWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 AD + + AA +V A+ + D A L G R+IL E FAE+A L ++R + Sbjct: 129 ADEVMAGNEAAADLPARAAAFVSAENDLPDVAAVLQGVRHILAEEFAENAILRGRLRKLM 188 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFD 210 WK LV+ + + + +D+ D Sbjct: 189 WKTGTLVTLRIEQAADASDE-KDHHD 213 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 69/211 (32%), Positives = 103/211 (48%), Gaps = 19/211 (9%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 ++ ++ + A +F E + G DI+ L +PGRDPR +F F Sbjct: 804 KSEVPSAAHAELVKKIAGVSAPEFAAELEVGEHLTRDILNSLSRPGRDPRADFPPPLFRR 863 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 G+ + DL+PGM L G V NV +FGAFVDIG+H G+VHIS L+N++V DPH VV GD+ Sbjct: 864 GIMKLEDLRPGMELSGTVLNVVDFGAFVDIGLHDSGMVHISRLANRYVSDPHEVVSVGDV 923 Query: 701 VKVKVLEVDLQRKRIALTM--------------RLDEQPGETNARRGGGNERPQNNRPA- 745 + V V+E+D R+R++LT + E R G RP N+P Sbjct: 924 ITVWVVEIDKDRRRVSLTAIEPGTEKAIPAADEKQRVDRPERAKRPPRGKNRPGGNKPQH 983 Query: 746 ---AKPRGREAQPAGNSAMMDALAAAMGKKR 773 KP+ + ++ AM + + Sbjct: 984 AGHGKPKAKTFVAKSKPTPKKPISEAMKEGK 1014 >UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZJ0_9PLAN Length = 1147 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 148/389 (38%), Positives = 220/389 (56%), Gaps = 13/389 (3%) Query: 205 FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL 264 F+DY+ E + +P HR LA+ RG +++ + AD + E + Sbjct: 359 FKDYYAFTEAVGRIPPHRILAINRGERARAIRVKIEADLEAMYRDAEELIVR-------- 410 Query: 265 RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 + P + +GV+ ++ LE E+ + + AE A++VF RNL LL+A P Sbjct: 411 --ADHPHADFLRGVLRDALNRLMVPSLEREIRREMTDFAETHAVDVFIRNLRKLLLAQPV 468 Query: 325 GLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY--PHTGQAAKAAMTVAALCEKHNVEL 382 R + +DPG ++G K+ +D G ++ IY + KA +A + +++NV + Sbjct: 469 RGRRVLAVDPGFKSGCKLVALDEFGNVLGHGMIYVIGKDDRRQKAKNRLAEIIKQYNVSV 528 Query: 383 VAIGNGTASRETERFYLDVQ-KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLR 441 +AIGNGT RETE+ DV + VIV+EAGAS+YS S L +E P D R Sbjct: 529 IAIGNGTGCRETEQLVADVLSNEVAGRDCAYVIVNEAGASIYSTSPLGREELPQYDALQR 588 Query: 442 GAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA 501 GA+SI RRL DPL+E+VKI+P ++GVG YQHD+ L LDAVVE CVN VGVD+N+A Sbjct: 589 GAISIGRRLLDPLSEMVKINPANLGVGLYQHDMKAKHLKESLDAVVESCVNFVGVDVNSA 648 Query: 502 SVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN 561 S LL V+G+ + A+ + +R E+G F NR+ L KV G F Q AGFL+I G+N Sbjct: 649 SPALLRYVSGMNALTARRVYEYRREHGPFHNREDLKKVPGFGDATFVQAAGFLKILGGEN 708 Query: 562 PLDASTVHPEAYPVVERILAATQQALKDL 590 LDA+++HPE+Y + R+L +++L Sbjct: 709 ALDATSIHPESYSIAIRVLEKIGSDVQEL 737 Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats. Identities = 81/192 (42%), Positives = 119/192 (61%), Gaps = 2/192 (1%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 ++A ++ ++++ V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ R++ LR L Sbjct: 9 LALVARDLHLPVDKIERTVSLLDDGNTVPFITRYRKDQTGGLDEEQIREIQDRVTKLRML 68 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 ER+ ILKSI QGKLT +LA+ I A + LEDLYLP+KPK++T +A + GLEPL Sbjct: 69 AERKATILKSIESQGKLTPELAEEIQAAPTTKRLEDLYLPFKPKKQTLATVARQRGLEPL 128 Query: 127 ADLLWSDPSHTPE--VAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 A + + + V AA +V D+ + L G ++L ERF+E+A L ++R Sbjct: 129 AREILEADAAATDLLVRAADFVSPDRELNSAAEVLLGVGHLLAERFSENAELRGRLRKIF 188 Query: 185 WKNAHLVSTVVS 196 K LVST + Sbjct: 189 QKTGKLVSTKIE 200 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 62/160 (38%), Positives = 90/160 (56%), Gaps = 5/160 (3%) Query: 594 SSELRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 + + + +E + G + DI+ L+KPG DPR G+ + DL+PGM Sbjct: 860 AEQAAAVDVKKLAEELQIGQHLLEDILATLKKPGLDPRDSLSAPLLRRGIMKLEDLEPGM 919 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 L G+V NV +FG FVDIG+ GLVHIS L+++++ DPH VV GD++KV V+EVD R Sbjct: 920 ELSGSVLNVVDFGVFVDIGLSDSGLVHISRLADRYIRDPHEVVGVGDVLKVWVVEVDKSR 979 Query: 713 KRIALTMRLDEQPGETNARRGGGNER-PQNNRPAAKPRGR 751 +R++LT PG +R ER P+ R PR + Sbjct: 980 RRVSLT---AIAPGSEKPQRPPRGERGPRQPRGDRGPRPQ 1016 >UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putative n=1 Tax=Ixodes scapularis RepID=B7Q0Q9_IXOSC Length = 1420 Score = 408 bits (1050), Expect = e-112, Method: Composition-based stats. Identities = 144/679 (21%), Positives = 269/679 (39%), Gaps = 96/679 (14%) Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRD 207 + AL GARY++ + + D + +R+ ++ A + T +E + Sbjct: 372 FPTAEEALKGARYMVAVQISMDPLVRRCIRETFFERAKICVTPSKKGLKEIDENHPCYPI 431 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 + ++P+ + + L M + EG+L+ S+ D P SY ++I + + Sbjct: 432 KYLKNKPVRDLEGEQFLHMSQAEGEGLLKTSIVMDSDSRSHPG-SYLDEIKQLYYRDEFS 490 Query: 268 NAPADSWRK--GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 N + + +S+ + E EL + A+D + R L++ L AP Sbjct: 491 NNVQEWNNQRCEALSYALSKLLYPAFEKELKVQLLLEAQDGIVKACCRKLYNWLKVAPYQ 550 Query: 326 LRATMGLDPGL--RTGVKV---------------AVVDATGKLVATDTIYPHTGQAAKAA 368 + M D R G++V A++D TG+++ + PH + + Sbjct: 551 VDPQMEEDEDFDTRDGIRVFAIAYENDWEVPAFGALIDGTGEVMEHLRL-PHLLKRKNSW 609 Query: 369 MTVAALCEKHNVELV----------AIGNGTASRETERFYLDVQKQFPKVT-------AQ 411 ++H++ ++ I G SRE + D++ + Sbjct: 610 KEKERELKEHDMRVLRKFILNKKPHVICVGAQSREALQIVEDIKAVVTDLAENEQMPLIN 669 Query: 412 KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIG 466 ++ A VY S+ A +F D + LR A+S+ARR+QDPL E ++ + + Sbjct: 670 VELLDNDLAIVYMNSKKAESDFRDYPLLLRQAISLARRMQDPLVEFSQLCTPDEEIFCLK 729 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMA-QNI 520 Q V +T L+ + N VGVD+N A + L+ + GL + Sbjct: 730 YHPLQDSVPRTDFTNGLNLEFVNRTNEVGVDINLAIAHTHTSYLVQFLCGLGPRKGYALL 789 Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPE 571 + + + ++R QL+ V +GPK F CAGF++I+ LD S VHPE Sbjct: 790 KTLKQSHQRLESRTQLVTVCHMGPKVFINCAGFIKIDTTSFENSTNAYVEVLDGSRVHPE 849 Query: 572 AYPVVERILAAT------------QQALKDLMGNSSELRNLKASD---FTDEKFGVPTVT 616 AY ++ +AL++++ N +LR + T + G+ Sbjct: 850 AYEWARKMAVDALEYDDVTEDVNPAEALEEILENPEKLRPMFLRAGKMVTCQVVGIARRK 909 Query: 617 DIIKELEK--PGRDPR------PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 ++L++ P R+ P F + E N G ++ G V Sbjct: 910 PHGQQLDQANPIRNDETGLWQCPFCLKNDFPELSEVWNHFDAGSCPGQSM------GVRV 963 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE----- 723 + +G +HI +S+K V +P V+ G I+ +++++D++R + LT R + Sbjct: 964 RLDNGVNGFIHIRFISDKKVTNPEERVRPGMILHCRIIKIDIERFAVDLTCRSSDLADVN 1023 Query: 724 QPGETNARRGGGNERPQNN 742 + NE P N Sbjct: 1024 NEWSVTLSQSSTNEEPNIN 1042 >UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria RepID=C5VIF1_9BACT Length = 910 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 153/459 (33%), Positives = 228/459 (49%), Gaps = 39/459 (8%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 S I+ + + V A + LL+EG T+PFI+RYRKE TGGLD+ Q+ ++ L+ Sbjct: 45 SGASFISHSLSLPLQSVSAVLTLLNEGCTIPFISRYRKERTGGLDEVQITDISELYDRLK 104 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL +R++ IL++I EQ KLT +L I A + TELED+YLPYKPKRRTR QIA E GLE Sbjct: 105 ELGKRKETILRTIREQEKLTPELEAKILACMDSTELEDIYLPYKPKRRTRAQIAREQGLE 164 Query: 125 PLADLLW------SDPSHTPE--------VAAAQYVYADKGVADTKAA----LDG----- 161 PLA + + P PE + A + ++ L G Sbjct: 165 PLALAIMREAQKPTAPPDLPEGGGDKLASILQKYQGRAKESLSSRVRIGTPPLSGRSGGA 224 Query: 162 -ARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTV 218 A I+ E +E+ VR + A + S V+ + +E KF DYFD EPL Sbjct: 225 LALDIIAEIVSENQQARNTVRTAYQRGAVITSKVIKKMKDTDEAQKFADYFDFSEPLRRC 284 Query: 219 PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGV 278 SHR LAM RG ++G+L++S+ D + Q + H + Sbjct: 285 NSHRLLAMRRGEDQGILRVSITIDGE---ECIARLTRQFVRGH-------GVCQTLVSQA 334 Query: 279 VSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRT 338 V +++ + +E E + RA++EAI VF NL LL++ P G + + LDPG Sbjct: 335 VEDSFKRLINPSIENEFAALSKGRADEEAIKVFTENLRQLLLSPPLGQKRVLALDPGFAN 394 Query: 339 GVKVAVVDATGKLVATDTIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETER 396 G K+A +D G L+ + IYPH Q +A + + +N+E +AIGNGTASRE++ Sbjct: 395 GCKIACLDEQGNLLHHEIIYPHPPRNQVRQATEALQRMINTYNIEAIAIGNGTASRESKE 454 Query: 397 FYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPD 435 F ++ + + + G+ Y + Q+F D Sbjct: 455 FVENITTETTTGPSPSPLPHREGSD-YRHLPKSKQQFTD 492 Score = 344 bits (882), Expect = 9e-93, Method: Composition-based stats. Identities = 173/370 (46%), Positives = 220/370 (59%), Gaps = 63/370 (17%) Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +VSE GAS+YSAS +A +EFPD DV+ RGA+SI RRL DPLAELVKIDPKSIGVGQYQHD Sbjct: 537 LVSEDGASIYSASPVAREEFPDEDVTTRGAISIGRRLMDPLAELVKIDPKSIGVGQYQHD 596 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNR 533 V Q++L LD V CVN VGV+LNTAS+ LLT V+GL +A+NI+ +R E+G F +R Sbjct: 597 VDQSKLKHSLDQTVMSCVNQVGVNLNTASLHLLTYVSGLGPALARNIIDYRREHGPFTSR 656 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 QL KV RLG A++QCAGFLRI NPLD S VHPE+Y +VE++ + +KDL+GN Sbjct: 657 AQLKKVKRLGDTAYQQCAGFLRIPDAKNPLDNSAVHPESYHIVEQMAKDLKCTIKDLIGN 716 Query: 594 SSELRNLKASDFTD-----------------------------EKFGVP----------- 613 L + + EK GVP Sbjct: 717 KKLLAEIDVKRYLTPQPPLRRERGSEASPNPSERRGGAPPNLPEKGGVPMRTREDKGALN 776 Query: 614 ---TVTDIIKEL---------EKPGRDPRPEFKTAQFADGVE-----------TMNDLQP 650 ++++ L E RD E + E T++DL Sbjct: 777 LPQHLSNVSTSLPPLLSEGSGEATLRDILTELEKPGRDPRGEVEVFEFDKNVHTLSDLII 836 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM L G VTN+TNFGAFVDIGVHQDGLVHIS LS++FV DP V++ V+V+V+EVD+ Sbjct: 837 GMELPGIVTNITNFGAFVDIGVHQDGLVHISQLSDRFVTDPTQVIRLHQHVRVRVVEVDM 896 Query: 711 QRKRIALTMR 720 +RKRIAL+M+ Sbjct: 897 RRKRIALSMK 906 >UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YD45_BRAFL Length = 1823 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 161/807 (19%), Positives = 285/807 (35%), Gaps = 169/807 (20%) Query: 110 KRRTRGQIAIEAGLEPLADLLWSDPSH-------------------TPEVAAAQYVYADK 150 RR I AGL LA P P + ++V + Sbjct: 551 SRRDMYSICETAGLGGLAKKFGLTPEQFGENLRDNYQRHETDQYPAEPNDLSKEFV--NS 608 Query: 151 GVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK----FR 206 + L GAR+++ + + + + VR ++ A + + +E + + Sbjct: 609 QFPSEEKVLQGARHMVAMQLSREPLVRQCVRQTYFERAKVSTKPTKKGRKEIDEMHYGYT 668 Query: 207 DYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRL 266 + ++P+ + + L M +EG+L+ ++ D + +SY E+I + Sbjct: 669 FKYLKNKPVKDLTGDQFLKMSIAEDEGLLKTHVSIDGET----TQSYFEEIKQLYYRDEF 724 Query: 267 NNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 ++ + R V+ + + +E EL + + ++D I R L++ L AP Sbjct: 725 SHLVQEWNTQRTMVLERMLKFILYPQMEKELRSKLVQESKDGIIKSCCRKLYNWLKVAPY 784 Query: 325 GLRAT----------MGLDPGLR-----------TGVKVAVVDATGKLVATDTI------ 357 MG GLR T AV+D G +V + Sbjct: 785 QPEQQIEEEDEYIEGMGSSKGLRVMGLAYSSDWDTASFAAVIDGEGDVVDFLRLAHLMKR 844 Query: 358 ---YPHTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDV-------QKQF 405 Y + K + ++ L ++ IG +R+ + DV +++ Sbjct: 845 RNAYREADRENKLSDMESIKNLILNKKPHVIVIG--AENRDAQSVIDDVKLCVKELEEEQ 902 Query: 406 PKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----- 460 ++ + S A E D LR A+S+ARR+QDPL E ++ Sbjct: 903 QLAPIAVELLDNELSRFIMNSPRAEAEHRDYPPLLRQALSLARRMQDPLIEFSQLCVNND 962 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRM 515 D + Q VS+ L L+ + VN VGVD+N + L V GL Sbjct: 963 DLLCLRFHTLQEQVSREDLLHALELEFINRVNEVGVDINRCVANNHTTTLAQFVCGLGPR 1022 Query: 516 MAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD--------NPLDAS 566 A I + N + +NR QL+ + +GPK F CAGF++I+ LD S Sbjct: 1023 KAAYIQKVLKQNNARLENRNQLVMMCHMGPKVFMNCAGFIKIDTKSLGDSEQYIELLDGS 1082 Query: 567 TVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE----KF 610 VHPE Y ++ A AL++++ L++L F +E F Sbjct: 1083 RVHPETYDWARKMAVDALEYDESAEDANPAAALEEILETPERLKDLDLDAFAEELERQGF 1142 Query: 611 GVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN 663 G T+ DI EL +D R F++ + ET G +++ VT + + Sbjct: 1143 GNKSITLYDIRAELNSMYKDLRTPFRSPTVEEKFNMLTKETPETFYIGKLVQCRVTGIAH 1202 Query: 664 F---------------------------------------------------GAFVDIGV 672 GA + Sbjct: 1203 RRPQGDQLDQANPVRSEETGLWRCPFCQKDTFPELSEVWNHFDSSECPGQATGAVTRLDN 1262 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR---LDEQPGETN 729 G + +S+K V+ P VK G V +++++D++R R+ L+ R L + G+ Sbjct: 1263 GVSGFIPTKMISDKHVKSPEERVKPGMEVYTRIIKIDIERFRVDLSCRSSDLADTNGDYR 1322 Query: 730 ARRG-GGNERPQNNRPAAKPRGREAQP 755 R + + A ++ Q Sbjct: 1323 PARDLYYDHETEETDRKADDEAKKKQA 1349 >UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=Brugia malayi RepID=A8P3Z1_BRUMA Length = 536 Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 171/533 (32%), Positives = 271/533 (50%), Gaps = 92/533 (17%) Query: 223 ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPAD-SWRKGVVSW 281 LA+ R ++G++ + D + I H GL+LN + V Sbjct: 53 ILALERASSKGIINWKIVVD------------DSIASIHPGLKLNFHLNHTDLLRKAVQD 100 Query: 282 TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVK 341 + + ++ +E ++ + +RAE+ AI+ FA+NL +LL+ AP A + +DPG G K Sbjct: 101 STKRFLIPSIERKVRRKLLDRAENSAIDCFAKNLRELLLTAPLKDYAVLAIDPGYSNGCK 160 Query: 342 VAVVDATGKLVATDTIYPHTGQAA------KAAMTVAALCEK--HNVELVAIGNGTASRE 393 A+V+ +G L+ T Y A +A + L K ++ ++AIGNGTASRE Sbjct: 161 CALVNDSGDLLQTAVFYFRRLNAKNWCPDERAEEILKTLVSKALNSPFVIAIGNGTASRE 220 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 T+ F + ++ + A+ +VSE GAS+YS +ELAA+E +D++LR AVS+ARR+ DP Sbjct: 221 TQVFIASLIQR-GVIAAKFCVVSECGASIYSTTELAAEELSGIDINLRSAVSLARRIIDP 279 Query: 454 LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT 513 ++E VKI PK +GVG YQH V++ +L LD VV +CV+ VGVD+N AS+ +L RV+GL Sbjct: 280 ISEYVKIAPKHLGVGLYQHSVNEKRLDEMLDIVVRECVSNVGVDVNVASLQVLQRVSGLN 339 Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------------- 560 + A NI+ +R +N ++R++L K++ +GPK FE CAGFL + +G Sbjct: 340 KKTAANIIKYRQDNAGIKSREELKKINGIGPKCFEHCAGFLYVYNGKRLNAPAKKKIKLS 399 Query: 561 ---NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 NPLDA+ VHPE+Y + +++ S L+ + G + Sbjct: 400 KEFNPLDATPVHPESYQIAKQL---------------SISLILEYAGADLTHIGQNNLYQ 444 Query: 618 IIKELEKPGRDPRPEFKT--------------AQFADGVETMNDLQPGMILEGAVTNVTN 663 ++ +E+ R+ PE+ + V M L+ G ILEG V N N Sbjct: 445 MLAVIEERIRERGPEWLSVWELLSNPFVRKNAPVLLTNVLEMKSLKVGDILEGVVRNHAN 504 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 FG F+DIGV+ VKV++ +++ R+RI Sbjct: 505 FGIFIDIGVNSS-------------------------VKVRITAINMDRRRIG 532 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%) Query: 14 IQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 + + V+L ++G VPFIARYR+ + G LR+ Sbjct: 1 MGFPSNVARSLVQLFEDGCEVPFIARYRRHLIDGATPDDLRHAVETFK 48 >UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bilateria RepID=SPT6H_HUMAN Length = 1726 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 173/962 (17%), Positives = 312/962 (32%), Gaps = 248/962 (25%) Query: 33 TVPFIARYRKEITGGLDDTQLRNLETRL------SYLRELEERRQAILKSISE------- 79 VPFIA YRKE + +L + +L R++ + + + Sbjct: 372 EVPFIAFYRKEYV----EPELH-INDLWRVWQWDEKWTQLRIRKENLTRLFEKMQAYQYE 426 Query: 80 ------QGKLTDDLA-------KAINATLSKTELEDLYLPY---------------KPKR 111 L D + + + S EL+D+Y + K R Sbjct: 427 QISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASR 486 Query: 112 RTR----------------------------------GQIAIEAGLEPLADLLWSDPSH- 136 + I AGL+ LA P Sbjct: 487 KKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQF 546 Query: 137 ------------------TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 P A YV + +A L+GARY++ + A + + Sbjct: 547 GENLRDSYQRHETEQFPAEPLELAKDYVCS--QFPTPEAVLEGARYMVALQIAREPLVRQ 604 Query: 179 KVRDYLWKNAHLVSTVVSGKEEE----GAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGV 234 +R + A L T ++ + + ++P+ + + L + +EG+ Sbjct: 605 VLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGL 664 Query: 235 LQLSLNADPQFDEP--PKESYCEQIIMDHLGLRLNNAPADSWRK--GVVSWTWRIKVLMH 290 L ++ D + E ++Y E+I + ++ + R+ + + + + Sbjct: 665 LTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQ 724 Query: 291 LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGL-------------- 336 + EL + A++ I +R L++ L AP + D Sbjct: 725 MAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRVLGI 784 Query: 337 ------RTGVKVAVVDATGKLVATDTIYPHTGQAAKAA------------MTVAALCEKH 378 V A+V+ G++ + PH + A T+ Sbjct: 785 AFSSARDHPVFCALVNGEGEVTDFLRL-PHFTKRRTAWREEEREKKAQDIETLKKFLLNK 843 Query: 379 NVELVAIGNGTASRETERFYLDVQKQFPKVT-------AQKVIVSEAGASVYSASELAAQ 431 +V + +R+ + DV++ ++ +V A +Y S+ + Sbjct: 844 KPHVVTVAG--ENRDAQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEA 901 Query: 432 EFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAV 486 EF D LR AVS+ARR+QDPL E ++ D + Q V + +L L Sbjct: 902 EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCE 961 Query: 487 VEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMM-AQNIVAWRDENGQFQNRQQLLKVS 540 + VN VGVD+N A S L+ V GL + + N + ++R QL+ + Sbjct: 962 FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC 1021 Query: 541 RLGPKAFEQCAGFLRINHGD---------NPLDASTVHPEAYPVVERIL----------- 580 +GPK F CAGFL+I+ LD S VHPE Y ++ Sbjct: 1022 HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE 1081 Query: 581 -AATQQALKDLMGNSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEF 633 A AL++++ N L++L F +E T+ DI EL +D R + Sbjct: 1082 DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY 1141 Query: 634 KTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF------------------------ 664 ++ + ET G ++ VT + + Sbjct: 1142 RSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC 1201 Query: 665 -------------------------GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 G + G + LS+K V+ P VK G Sbjct: 1202 QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM 1261 Query: 700 IVKVKVLEVDLQRKRIALTMRLDE-----QPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 V +++++D+++ LT R + + + + + R+ Q Sbjct: 1262 TVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQQ 1321 Query: 755 PA 756 Sbjct: 1322 RT 1323 >UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae) n=1 Tax=Ciona intestinalis RepID=UPI000180C965 Length = 1609 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 158/905 (17%), Positives = 315/905 (34%), Gaps = 219/905 (24%) Query: 35 PFIARYRKEITGGLDDTQLRNLETRL---SYLRELEERRQAILKSISEQG---------- 81 PFI+ YRKE + + +L ++ R+ ++ + + + Sbjct: 315 PFISFYRKEYVEP--ELNIHDLFKIYHWDEKWTQMNVRKASVTRLMQKMQTFQYEQISAD 372 Query: 82 ----------KLTDDLAKAINATLSKTELEDLYLPY------------------------ 107 LTD + + + E D+Y + Sbjct: 373 PDKPLGDNVRALTDADIERLQGIQTMEEYHDIYRHFLLHYGRDVPKMQNALRIQRQRERA 432 Query: 108 ------------------KPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD 149 + RR + ++AG+ +A+ P E Y + Sbjct: 433 ENGLNPDEDAPSLASDLKQASRRHMYTVCLDAGIGGVANKFGLTPEQFGENLRDNYQRHE 492 Query: 150 KG-----------------VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 + +A L+GARY++ + A + + VR + A + Sbjct: 493 TEQYPAEPMDLAEDFLCPQFSTKEAVLEGARYMVAMQLAREPLVRQCVRQTFNERAKISV 552 Query: 193 TVVSGKEEE----GAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 ++E F + ++P+ + + L + E ++ ++++ D Sbjct: 553 QPTKKGKKEIDEGHPCFSYKWLQNKPVKDLSGPQFLHIKNAETENLVTMTIHIDMHGTVG 612 Query: 249 PKESYCEQIIMDHLGLRLNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDE 306 ++Y E+I + ++ + R VV + + + + EL + + A++ Sbjct: 613 -SQTYFEEIKQLYYRDEFSHLVQEWNNQRSKVVEFMLQNIIYPEMTKELKTLLYDEAKNG 671 Query: 307 AINVFARNLHDLLMAAPAG---------------LRATMGL--DPGLRTGVKVAVVDATG 349 A L L AP M + + + AVV G Sbjct: 672 IKEHCALKLRSYLSVAPYQLEEREYDEDEEEERKGTVVMAIAYSEERDSAMFAAVVSGLG 731 Query: 350 KLVATDTIY-------PHTGQAAKAAMT----VAALCEKHNVELVAIGN-----GTASRE 393 ++V + H + AK + + K +V IG T + Sbjct: 732 EVVDFLKLPNMRFRRKSHIEEEAKRKKSDMDQLKKFMSKRKPHVVVIGAEDRLATTIQED 791 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 ++ D++++ ++ +SVY++++ A +F D V LR A+S+ARRLQDP Sbjct: 792 VQQCVTDLEQEGVISNVAVELMDNELSSVYASTQRAQADFRDFPVELRQAISLARRLQDP 851 Query: 454 LAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SV 503 + E ++ D + + Q +++ +L L VGVD+N A + Sbjct: 852 MLEFSQLCTADQDLMCLKLHPLQDQLNKDELLEALVEEFVFRACEVGVDVNRAITHPHTA 911 Query: 504 PLLTRVAGLTRMMAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-- 560 ++ V GL A +++ + +NG+ +NR L+ V ++GPK F CAGF++I+ Sbjct: 912 TVVQFVCGLGPRKAAHLLKVLKQKNGRLENRSNLVTVCKMGPKIFINCAGFIKIDTKSIM 971 Query: 561 --------NPLDASTVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNL 600 LD VHPE Y ++ A AL +++ + L++L Sbjct: 972 EDSTDAYIEILDGLRVHPETYEWARKMAVDALEYDESAEDANPSSALVEILESPERLKDL 1031 Query: 601 KASDFTDE----KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQ 649 F +E +G T+ DI EL +D R ++++ + ET+++ + Sbjct: 1032 DLDAFAEELERQGYGNKGITLYDIRNELNSQYKDFRTPYRSSTAEEKFEMVTKETLSNFK 1091 Query: 650 PGMILEGAVTNVTNF--------------------------------------------- 664 G ++ VT + + Sbjct: 1092 EGKMITCRVTGIAHRRPKSEQLDQAEPHKDEETGMWNCSFCKTGGFAELSEVWAHLDNGE 1151 Query: 665 ------GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 G V + G + LS+K V +P V G + ++ ++D++R ++ LT Sbjct: 1152 CLGRAVGVKVRLEGGITGFIPTDKLSDKPVSNPEERVHIGMTIHCRITKIDIERFQVDLT 1211 Query: 719 MRLDE 723 R + Sbjct: 1212 CRGSD 1216 >UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eumetazoa RepID=SPT6H_DANRE Length = 1726 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 146/778 (18%), Positives = 276/778 (35%), Gaps = 162/778 (20%) Query: 110 KRRTRGQIAIEAGLEPLADLLWSDPSH-------------------TPEVAAAQYVYADK 150 RR I AGL+ LA P P A YV + Sbjct: 511 SRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCS-- 568 Query: 151 GVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK----FR 206 +A L+GARY++ + A + + +R + A + +++ + + Sbjct: 569 QFNTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDVDEAHFAYS 628 Query: 207 DYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP-QFDEPPKESYCEQIIMDHLGLR 265 + ++P+ + + L M EG+L + + D ++Y ++I + Sbjct: 629 FKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQFYYRDE 688 Query: 266 LNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 ++ + R + + + + + EL + A+D + + L++ L AP Sbjct: 689 FSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYNWLKVAP 748 Query: 324 AGLRATMGLDP--------------------GLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 + D G T V ++++ G++V + P+ + Sbjct: 749 YRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRL-PYFLK 807 Query: 364 AAKAAMT------------VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT-- 409 A + +VA+ +R+ D+++ ++ Sbjct: 808 RRNAWREDEREKKQQDVENLKKFLLSKKPHVVAVSG--ENRDAHMVMEDIKRTISELEQN 865 Query: 410 -----AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI---- 460 +V A +Y S+ + +F D LR AVS+AR++QDPL E ++ Sbjct: 866 SSLPVVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTD 925 Query: 461 -DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTR 514 D + + Q V + +L L + VN VGVD+N A + L+ + GL Sbjct: 926 DDILCLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGP 985 Query: 515 MMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLD 564 +++ + N + +NR QL+ + +GPK F CAGF++I+ LD Sbjct: 986 RKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLD 1045 Query: 565 ASTVHPEAYPVVERIL------------AATQQALKDLMGNSSELRNLKASDFTDE---- 608 S VHPE Y ++ A AL++++ N L++L F +E Sbjct: 1046 GSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQ 1105 Query: 609 KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNV 661 +G T+ DI EL +D R ++ + ET G ++ VTN+ Sbjct: 1106 GYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNI 1165 Query: 662 TNF-------------------------------------------------GAFVDIGV 672 + G + Sbjct: 1166 AHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDN 1225 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNA 730 G + LS+K V+ P VK G V +++++D+++ + LT R + + N Sbjct: 1226 AVMGFIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNNE 1283 >UniRef50_UPI000186D180 transcription elongation factor SPT6, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D180 Length = 1783 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 134/739 (18%), Positives = 259/739 (35%), Gaps = 140/739 (18%) Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL-- 190 S P A QY+ + + L ++++ + A + + VR+ ++ A + Sbjct: 567 QESTEPLQLAKQYIS--RQFMQPEDILKAVKFMVATQLAREPLVRKCVRETFFEKAKIDV 624 Query: 191 --VSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 + +E A + + +P+ + + + + + +L + D + Sbjct: 625 KPTRKGIKEIDENHACYSMKYLKGKPVRELQGDQFIKLAMAEEDKLLT--ITFDERIPGL 682 Query: 249 PKESYCEQIIMDHLGLRLNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDE 306 SY E++ + + D R V + +L L+ EL + A + Sbjct: 683 TSLSYIEEVKQLYYRDEFSKNVQDWNALRVECVEIALKKILLPDLKKELKAHLLSEAREY 742 Query: 307 AINVFARNLHDLLMAAPA--------------GLRATMGLD--PGLRTGVKVAVVDATGK 350 + + R L++ + AP MG+ P L VV G+ Sbjct: 743 ILKLCTRKLYNWIKIAPYTSEFDHDDEDWDTSKGLRVMGVAYVPDLSQAAFACVVGPDGE 802 Query: 351 LVATDTIYPHTGQAAKAAMT------------VAALCEKHNVELVAIGNGTASRETERFY 398 + PH + +A + L + ++ IG SR+ Sbjct: 803 CTDYLRL-PHLLKRKLSANKEDNIKKEHDLTSLKNLIQSKKPHVIVIGG--ESRDAIMIK 859 Query: 399 LDVQKQFPKV-------TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 D+Q+ + + I+ A Y+ S EF D + LR A+S+ARR+Q Sbjct: 860 TDIQQLVTSLVEDDEFASIAVEILDNELAKTYANSIKGENEFRDYPLLLRQAISLARRMQ 919 Query: 452 DPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA----- 501 DPL E ++ + + Q V + +L L + N VGVD+N A Sbjct: 920 DPLTEFSQLCTSDEEILCLRYHPLQDQVPKEELLEALYIEFINRTNEVGVDVNRAVAQAY 979 Query: 502 SVPLLTRVAGLTRMMAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 + L+ + G A ++ + N + +NR QL+ +GPK F CAGF++I+ Sbjct: 980 TSNLVQFICGFGPRKAAALLKTLKQNNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNS 1039 Query: 561 ---------NPLDASTVHPEAYPVVERIL----------AATQQALKDLMGNSSELRNLK 601 LD S VHPE Y ++ A AL++++ + L++L Sbjct: 1040 LGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEEANPAGALEEILESPERLKDLD 1099 Query: 602 ASDFTDE----KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQP 650 F +E FG T+ DI EL D R + + + E+ Sbjct: 1100 LDAFAEELERQGFGNKSITLYDIRAELNHRYNDLRTPYWSPNSEELFDMLTKESPETFYI 1159 Query: 651 GMILEGAVTNVTNF---------------------------------------------- 664 G ++ V +T+ Sbjct: 1160 GKMVLARVVGITHKRPKGDQLDQANPVRNDETNLWQCPFCLKNDFPELSEVWNHFDAGSC 1219 Query: 665 -----GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 G + + +G +H+ +LS+K V +P V+ ++ ++ ++++ R + T Sbjct: 1220 PGQATGVRLRLDNGINGYIHVRNLSDKHVSNPEERVQQNQMIHCRITKIEVDRFSVECTS 1279 Query: 720 RLDEQPGETNARRGGGNER 738 + + + + R + Sbjct: 1280 KSSDLADKNHEWRPPKDPY 1298 >UniRef50_D1IGV1 Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1IGV1_VITVI Length = 1646 Score = 365 bits (936), Expect = 4e-99, Method: Composition-based stats. Identities = 152/904 (16%), Positives = 315/904 (34%), Gaps = 165/904 (18%) Query: 11 AGEIQARPEQVDAAVRL-----LDEGNTVPFIARYRKEITGGL--DDTQLRN-------- 55 ++ + + + L LD VPFIA YRKE L D QL Sbjct: 332 GHDLSINKDDIMRFLDLVHVQKLD----VPFIAMYRKEECLSLLKDPDQLEADDGNLDNP 387 Query: 56 --------------LETRLSYLRELEERR------------------------------- 70 ++ L++R+ Sbjct: 388 EKTPKLKWHKVLWAIQDLDRKWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQLF 447 Query: 71 QAILKSI--SEQGKLTDDLAKAINATLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLA 127 ++I+KS+ +E + DD N E+ YK PKR+++ I +AGL +A Sbjct: 448 ESIIKSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKAGLWEVA 507 Query: 128 DLL--------------------WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILM 167 + D PE A+ + A +A L GAR++ Sbjct: 508 NKFGYSSEQFGLQISLEKMRMDELEDAKEPPEEMASNFTCA--MFETPQAVLKGARHMAA 565 Query: 168 ERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHRA 223 + + + VR NA + ++ F + + +P++ + Sbjct: 566 VEISCEPCVRKHVRSIYMDNAVVSTSPTPDGNVVIDAFHQFAGVKWLREKPVTKFEDAQW 625 Query: 224 LAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTW 283 L + + E +LQ+++ + + D G+ + + RK ++ Sbjct: 626 LLIQKAEEEKLLQVTIKLPELVLNKLISDSNDYYLSD--GVSKSAQLWNEQRKLILQDAI 683 Query: 284 RIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR------------ATMG 331 +L +E E + R+++ + + + L + + AP + M Sbjct: 684 FGFLLPSMEKEARSLLTSRSKNWLLLEYGKVLWNKVSVAPYQRKENDVSSDDEAALRVMA 743 Query: 332 --LDPGLRTGVKVAVVDATGKLVATDTIYP-----------HTGQAAKAAMTVAALCEKH 378 PG + ++D++G+++ D +Y + V H Sbjct: 744 CCWGPG-KPATSFVMLDSSGEVL--DVLYTGSLTLRSQNVNDQQRKKNDQQRVLKFMTDH 800 Query: 379 NVELVAIG--NGTASRETERFYLDVQKQFPK---------VTAQKVIVSEAGASVYSASE 427 +V +G N + ++ + Y + K + V E+ +Y + Sbjct: 801 QPHVVVLGAVNLSCNKLKDDIYEIIFKMVEENPRDVGHEMDGISVVYGDESLPHLYENTR 860 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARK 482 +++ + P ++ AV++ R LQ+PLA + + + S + + ++ + Sbjct: 861 ISSDQLPGQSGIVKRAVALGRYLQNPLAMVSTLCGPGREILSWKLCSLEDFITPDEKYGM 920 Query: 483 LDAVVEDCVNAVGVDLNTASVPL-----LTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 ++ V+ D N VG+D+N A+ L ++GL A ++ G R+ + Sbjct: 921 IEQVMVDATNQVGLDINLAASHEWLFSPLQFISGLGPRKAASLQRSLVRAGTISTRRDFV 980 Query: 538 KVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPEAYPVVERILAATQQALK 588 + LG K F AGFLR+ + LD + +HPE+Y + + + A++ Sbjct: 981 VLHGLGKKVFLNAAGFLRVRRSGLAAASSQIIDLLDDTRIHPESYGLAQELAKDM--AIE 1038 Query: 589 DLMGNSSELRNLKASDFTDEK---FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV--- 642 + + L+ L + +K T+ I EL + +D R +++ + Sbjct: 1039 HVRDRPNRLKALDVDQYAKDKKLENKRETLYAIKMELIQGFQDWRRQYEEPTQDEEFYMV 1098 Query: 643 --ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF--VEDPHTVVKAG 698 ET + L G I++ + V A + G++ S+ + + D + G Sbjct: 1099 TGETEDTLAEGRIVQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEG 1158 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 D++ K+ + R ++ L + E + + +R + + +A+ Sbjct: 1159 DMLTCKIKTIQKNRFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKE 1218 Query: 759 SAMM 762 A Sbjct: 1219 LAKK 1222 >UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Neoptera RepID=SPT6H_DROME Length = 1831 Score = 363 bits (933), Expect = 1e-98, Method: Composition-based stats. Identities = 151/807 (18%), Positives = 283/807 (35%), Gaps = 162/807 (20%) Query: 106 PYKPKRRTRGQI---AIEAGLEP--LADLL--------WSDPSHTPEVAAAQYVYADKGV 152 PY R + I A GL P A+ L + S P A QY+ Sbjct: 528 PYAVFR--KAGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQYLSPR--F 583 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDY 208 T + A+Y++ + A++ L +R+ + A + +E + Sbjct: 584 MTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSPVYSMK 643 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE---SYCEQIIMDHLGLR 265 + +P+S + + + + E +L+++ + + + Y E+ + + Sbjct: 644 YVAKKPVSDLFGDQFIKLMMAEEEKLLEITFLEEFEGNACANGTPGDYVEESKALYQLDQ 703 Query: 266 LNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 + R V + V+ L EL T+ E A+ + L+ L AP Sbjct: 704 FAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYKWLKVAP 763 Query: 324 AGLR----------------ATMGL--DPGLRTGVKVAVVDATGKL---VATDTIYPHTG 362 + +GL DP AV G + + I Sbjct: 764 YKPQLPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRKN 823 Query: 363 QAAKAAM--------TVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT----- 409 ++ + +V IG SR+ + D+++ ++ Sbjct: 824 SYNLEEKAQKLADLRKLSDFIKMKKPHIVVIG--AESRDAQNIQADIKEILHELETSEQF 881 Query: 410 --AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DP 462 + I+ A +Y+ S+ +F + L+ A S+AR++QDPL E ++ + Sbjct: 882 PPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADDEI 941 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL-----NTASVPLLTRVAGLTRMMA 517 + Q V + QL +L + + VG+D+ N+ ++ LL + GL Sbjct: 942 LCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINLLQYICGLGPRKG 1001 Query: 518 QNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDAST 567 Q ++ + N + +NR QL+ V LGP+ F C+GF++I+ LD S Sbjct: 1002 QALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDGSR 1061 Query: 568 VHPEAYPVVERILAATQQ----------ALKDLMGNSSELRNLKASDFTDE----KFGVP 613 VHPE Y ++ + AL++++ + L++L F E FG Sbjct: 1062 VHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSK 1121 Query: 614 --TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVT---- 662 T+ DI EL +D R + + ET + G + VT T Sbjct: 1122 SITLYDIRNELSCLYKDYRTPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYRRP 1181 Query: 663 ---------------------------NF--------------------GAFVDIGVHQD 675 +F G V + Sbjct: 1182 QGDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENGLP 1241 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR---LDEQPGETNARR 732 G +HI +LS++ V +P V+ ++ V+++++D+ R + + R L + E RR Sbjct: 1242 GFIHIKNLSDRQVRNPEERVRVSQMIHVRIIKIDIDRFSVECSSRTADLKDVNNEWRPRR 1301 Query: 733 GGGNER---PQNNRPAAKPRGREAQPA 756 + Q+NR + + R + Sbjct: 1302 DNYYDYVTEEQDNRKVSDAKARALKRK 1328 >UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS Length = 1841 Score = 361 bits (926), Expect = 7e-98, Method: Composition-based stats. Identities = 152/807 (18%), Positives = 281/807 (34%), Gaps = 162/807 (20%) Query: 106 PYKPKRRTRGQI---AIEAGLEP--LADLLW--------SDPSHTPEVAAAQYVYADKGV 152 PY R + I A GL P A+ L + S P A QY+ Sbjct: 539 PYAVFR--KAGICGFAKHFGLTPEQFAENLRDNYQRNEVTQESLGPLELAKQYLSPR--F 594 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDY 208 T+ + A+Y++ + A++ L +R+ + A + +E + Sbjct: 595 MTTEEVMHAAKYVVARQLAQEPLLRKTMREVYFDRARIDIRPTKNGMVLIDENSPVYSMK 654 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP---PKESYCEQIIMDHLGLR 265 + +P+ + + + + E +L+++ + + + P Y E+ + + Sbjct: 655 YVAKKPVGDLFGDQFIKLLMAEEEKLLEITFLEEFEGNANANGPPGDYVEEAKALYNLDQ 714 Query: 266 LNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 + + R V + V+ L EL T+ E A+ + L+ L AP Sbjct: 715 FSKHVLEWNALRAECVQLALQKWVIPDLIKELRATLHEEAQQFVLRSCTAKLYKWLKVAP 774 Query: 324 AGLR----------------ATMGL--DPGLRTGVKVAVVDATGKL---VATDTIYPHTG 362 +GL DP AV G + + I Sbjct: 775 YKPELPQDYKYDDWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRKS 834 Query: 363 QAAKAAM--------TVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT----- 409 ++ + +V IG SR+ + D+++ ++ Sbjct: 835 SHNAEEKGQKLADLRKLSEFIKMKKPHIVVIG--AESRDAQMIQTDIKEILKELETTEQF 892 Query: 410 --AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DP 462 + I+ A +Y+ S+ +F + L+ AVS+AR++QDPL E ++ + Sbjct: 893 PPIEVEIIDNELAKIYANSKKGESDFKEYPPQLKQAVSLARKMQDPLVEYSQLCDADDEI 952 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL-----NTASVPLLTRVAGLTRMMA 517 + Q V + L L + + VG+D+ N+ +V LL GL Sbjct: 953 LCLRYHPLQERVPRDMLLEYLSLEFINRTSEVGLDINMMVQNSRTVNLLQYTCGLGPRKG 1012 Query: 518 QNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDAST 567 Q ++ + N + +NR QL+ V LGPK F C+GF++I+ LD S Sbjct: 1013 QALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGSR 1072 Query: 568 VHPEAYPVVERILAATQQ----------ALKDLMGNSSELRNLKASDFTDE----KFGVP 613 VHPE Y ++ + AL++++ + L++L F E FG Sbjct: 1073 VHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGSK 1132 Query: 614 --TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVT---- 662 T+ DI EL +D R F+ + ET + G + VT T Sbjct: 1133 SITLYDIRNELSCLYKDYRSPFQKPSAEELFDLLTKETPDSFYVGKCVTAMVTGFTYRRP 1192 Query: 663 ---------------------------NF--------------------GAFVDIGVHQD 675 +F G V + Sbjct: 1193 QGEQLDNANPVRNETTGSWQCPFCHKDDFPELSEVWNHFDANSCPGQASGVRVRLDNGLP 1252 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR---LDEQPGETNARR 732 G +HI +LS+K V +P V+ ++ V+++++D+ R + + + L + E RR Sbjct: 1253 GFIHIKNLSDKQVRNPEERVRVAQMIHVRIIKIDIDRFSVDCSSKTADLKDVNNEWRPRR 1312 Query: 733 GGGNE---RPQNNRPAAKPRGREAQPA 756 + +NR + + + Sbjct: 1313 DAFYDFVTEELDNRKVTDAKAKALKRK 1339 >UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O80815_ARATH Length = 1684 Score = 361 bits (926), Expect = 8e-98, Method: Composition-based stats. Identities = 156/790 (19%), Positives = 302/790 (38%), Gaps = 134/790 (16%) Query: 36 FIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS--EQGKLTDDLAKAINA 93 + RY +E D+T+L YL ++++KS+ E + DD+ N Sbjct: 457 YTKRYEEESRRVYDETRL----NLNQYLF------ESVIKSLKVAETEREVDDVDSKFNL 506 Query: 94 TLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLADLL-------------------WSD 133 E+ YK PKR+++ I +AGL +A+ D Sbjct: 507 HFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDELED 566 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST 193 TPE A +V A ++ A L GAR++ + + ++ VR +NA + ++ Sbjct: 567 AKETPEEMAKNFVCA--MFENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTS 624 Query: 194 VVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 + F + + +PLS + L + +G E +LQ++ P+ Sbjct: 625 PTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKL-PENYMNR 683 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 S C + + +G+ + RK ++ +L +E E + RA+ ++ Sbjct: 684 LISDCNEHYLS-VGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLS 742 Query: 310 VFARNLHDLLMAAPAGLRAT-MGLD-------------PGLRTGVKVAVVDATGKLVATD 355 + + L + + A P + + LD PG ++D++G+++ D Sbjct: 743 EYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTF-VMLDSSGEVL--D 799 Query: 356 TIYP----------HTGQAAKAAM-TVAALCEKHNVELVAIG--NGTASRETERFYLDVQ 402 +Y + Q K+ V H +VA+G N + +R + Y + Sbjct: 800 VLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIF 859 Query: 403 KQFPK---------VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 + + V V E+ +Y S ++ ++ P ++R AV++ R LQ+P Sbjct: 860 QMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNP 919 Query: 454 LAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR 508 LA + + + S + ++ + + ++ V+ D N Sbjct: 920 LAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITN--------------QF 965 Query: 509 VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-------- 560 ++GL A ++ G R+ L+ + LG K F AGFLRI Sbjct: 966 ISGLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQF 1024 Query: 561 -NPLDASTVHPEAYPVVERILA----------------ATQQALKDLMGNSSELRNLKAS 603 + LD + +HPE+Y + + + A + A++ + + LR + Sbjct: 1025 IDLLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLD 1084 Query: 604 DFTDEK---FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILE 655 ++ K T ++II+EL +D R FK + ET + + G I++ Sbjct: 1085 EYLASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQ 1144 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF--VEDPHTVVKAGDIVKVKVLEVDLQRK 713 +V + N A + G++ S+ + D +K GDI+ K+ + QR Sbjct: 1145 ASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRY 1204 Query: 714 RIALTMRLDE 723 ++ L + E Sbjct: 1205 QVFLICKESE 1214 >UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Schizosaccharomyces pombe RepID=SPT6_SCHPO Length = 1365 Score = 351 bits (900), Expect = 7e-95, Method: Composition-based stats. Identities = 167/841 (19%), Positives = 300/841 (35%), Gaps = 124/841 (14%) Query: 33 TVPFIARYRKE--ITGG---------LDDTQLRNLETRLSYLRELEERRQAILKSISEQG 81 VPFI ++R++ + L L N+ + L ++Q ILK S+ G Sbjct: 332 EVPFIWQHRRDYIVHNNRERNTITPLLSQNDLWNIFFLCTKFWSLHSKKQDILKLYSDLG 391 Query: 82 KLTDDLAKAINATLSKTELEDL------------------------------YLPY-KPK 110 D + A S ++DL Y + K + Sbjct: 392 INDDLVVPFCEAASSLDAIDDLNDYIHFTYSEQIRDRALLMGTGLRRPQGSKYSFFEKFR 451 Query: 111 RRTRGQIAIEAGL----------EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALD 160 + + + E G+ + D + +PE + YV + ++ + L Sbjct: 452 KSSLYNLVKEFGMSAKDFSFNVAQGARLRFVEDNTLSPEELSRTYVTNE--LSSPEQVLQ 509 Query: 161 GARYILMERFAEDAALLAKVRDYLWKNAHL----VSTVVSGKEEEGAKFRDYFDHHEPLS 216 AR +L E D RD L+ + V E + + +PL Sbjct: 510 KARRVLAEEIIHDPQFRKSFRDKLYNAGVVTVLATQKGVRKIGSEHPYYEFKYLKRKPLG 569 Query: 217 T--VPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSW 274 + + L M + EG++QLS+ + + + E + D+ N ++ Sbjct: 570 SFELEPILFLKMLKAEEEGLIQLSIEF--EDPDDVFKGLLELFVSDNFSE--NAMQWNAQ 625 Query: 275 RKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP 334 R+ V+ ++ + + T+R R DE L L AP +T D Sbjct: 626 RELVLKEVFKRFSALA-PDAIRETLRSRYLDELGMRCRNQLFSRLDQAPYEP-STKNFDR 683 Query: 335 GLRTGVKVAVVDATGK------LVATDTIYPHTGQAAKAAMT-------VAALCEKHNVE 381 G V +AV + G+ V D + T A + A EK + Sbjct: 684 GTIPSV-LAVSNGKGESSDAIICVFVDDVGEPTDSLKLADLRDLANQAMFAEFVEKVKPD 742 Query: 382 LVAIGNGTASRETER-FYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSL 440 ++ + + S R D V ++V++ A +Y S A EFP L Sbjct: 743 VIGVSGMSVSAHKIRQHVQDSLTSHEPVDL--IMVNDEVARLYQNSTRAVDEFPTLPTIS 800 Query: 441 RGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL 498 V++AR +Q+PL E + D S+ +QH + L + L+ + D + VG+D+ Sbjct: 801 CYCVALARYVQNPLFEYAAMGRDLMSLSFDPWQHLLPPDVLWKYLETALVDISSLVGIDI 860 Query: 499 NTA-----SVPLLTRVAGLTRMMAQN-IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAG 552 N A +L +AGL A + G+ NR L+ + K F C+ Sbjct: 861 NEAVTNKYEANILPYIAGLGPRKADYVLKKIAATGGRIDNRSDLISKQIMSRKVFINCSS 920 Query: 553 FLRINHGDNP----LDASTVHPEAYPVVERILAA-------------TQQALKDLMGNSS 595 F I + + P LD++ +H E Y + ++ + T + + + + Sbjct: 921 FFIIPNDEYPNMDILDSTRIHNEDYELARKMASDALELDEEDIEELETNRGVVYHLLEEN 980 Query: 596 ELRNLK---ASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV---- 642 E L ++ D+ + T+ I EL+ P + R F ++ Sbjct: 981 ETGKLDELVLEEYADQLEREFHQKKRNTLEKIRLELKDPYGEQRNVFHKLTPSEIFLMLT 1040 Query: 643 -ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 E +LQ I+ V VTN V + DG + +S+ F+ P +++ G V Sbjct: 1041 GENPEELQADAIVPVNVRRVTNRFVAVKLDCGIDGNIKADEVSDDFIP-PPQLLQVGQTV 1099 Query: 702 KVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAM 761 + ++ +D + L++R N++R + R A+ R E A A Sbjct: 1100 EGVIISLDEANFMVDLSLRNS-VLQSANSKRQTSSHRTSYWDTEAEKRDTERMQAETQAE 1158 Query: 762 M 762 Sbjct: 1159 Q 1159 >UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=1 Tax=Nasonia vitripennis RepID=UPI00015B5616 Length = 1341 Score = 347 bits (890), Expect = 1e-93, Method: Composition-based stats. Identities = 170/850 (20%), Positives = 313/850 (36%), Gaps = 153/850 (18%) Query: 33 TVPFIARYRKE-ITGGLDDTQLRNLETRLSYLRELEERRQAILKSISE----------QG 81 VPFI+ YRKE + LD L + + ++ +R+QA+L + Sbjct: 237 EVPFISHYRKEYVLPELDIEDLWKVYKFDAKWCQMVQRKQALLALFRKLKRYQKDSPSSE 296 Query: 82 KLT---DDLAKAINATLSKTELEDLYLPY---------------------KP-------- 109 K+ ++ K + + EL D Y + KP Sbjct: 297 KVILDKEEHEKQLEIAQTAEELNDCYEHFMLYHADEILEMQEIELKQEKGKPEEKLKRAV 356 Query: 110 KRRTRGQIAIEAGLEPLADL-----------------LWSDPSHTPEVAAAQYVYADKGV 152 +R + I AGLE LA ++ E Y K Sbjct: 357 RRSGQYSIYKRAGLENLAKRFGLRPEQFSKNVSEEYQIFEVEQDPNEPGTIAAEYVGKNF 416 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL----VSTVVSGKEEEGAKFRDY 208 L ++++ + A + L VR + A + + + + Sbjct: 417 KSADEVLKAVQHMVAIQLAREPLLRKSVRATFKRKAKISVRPTKQGIKSIDGNHPIYSMK 476 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN 268 + +P++ + + L + + ++ +S + + D ++Y EQ+ ++ + Sbjct: 477 YLKDKPVADLVGDQFLKLAMAEADKLIVISFSDTIEGD--TSKNYVEQMKQLYVKDEFSK 534 Query: 269 APADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA-- 324 + + R G V VL L+ EL T+ A++ + R H+ + AP Sbjct: 535 SVREWNALRVGSVEIALEKIVLPDLKKELHSTLLSEAKECVMRSCVRKAHNWIKVAPYAC 594 Query: 325 ---------------GLRATMGLD--PGLRTGVKVAVVDATGKL---------VATDTIY 358 MG+ P +V+ G+ + IY Sbjct: 595 DLFSQKTDDDKRDASEGLRVMGVAYVPDFSIAAYACLVEPKGECTDYVKLPHLLKRKNIY 654 Query: 359 PHTGQAAKAA--MTVAALCEKHNVELVAIGNGTAS--------RETERFYLDVQKQFPKV 408 + ++AK A + +V IG + RE L +K+ P + Sbjct: 655 RNLERSAKEADLAAIKNFIAGRRPHVVVIGGESKDALLIADEIRECIA-ALVAEKRCPAI 713 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 + I+ A +++ S A EF D + LR A+S+ARRLQDPL E ++ + Sbjct: 714 KVE--IMDNHLAVIFANSLQARSEFRDYPLELRQAISLARRLQDPLVEFSQLCNSENEIL 771 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT-----ASVPLLTRVAGLTRMMAQ 518 + Q +++ +L + + + VN VGVD+N LL V GL AQ Sbjct: 772 CLKYHDLQDQLAKEELLQSIQLEFVNRVNEVGVDINKIIQQHHGENLLQYVCGLGERKAQ 831 Query: 519 NIVAW--RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDAST 567 ++ EN +NR QL+ +GPK F C GF++I+ LD S Sbjct: 832 TLIRIVKHKENKCLENRSQLVTACHMGPKVFTNCVGFIKIDTDSLADSTEDYVEELDGSR 891 Query: 568 VHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP--TVTDIIKELEKP 625 VHPEAY ++ A +++ + + + + + FG T+ DI +EL+ Sbjct: 892 VHPEAYEFARKMAADARRSSRRI---EDLDLGAYSKELEKQGFGSKHITLRDIGRELDAG 948 Query: 626 GRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNV-------TNFGAFVDIGVH 673 +D R +++ ET G ++E VT + T G + + Sbjct: 949 YKDARSPYRSPDPDKLFNMLTKETPESFHIGKLVEATVTGISYNKARGTAAGVQLRLDNG 1008 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G +H +LS+++ +P V+ G ++ ++ +++ R + T + ++ E Sbjct: 1009 IRGFIHKRNLSDEYATNPEEGVRVGGRIRCRITKIEAHRFSVEATSKSNDLADE------ 1062 Query: 734 GGNERPQNNR 743 G RP+ +R Sbjct: 1063 GHRWRPRKDR 1072 >UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=Sordariomycetidae RepID=SPT6_NEUCR Length = 1402 Score = 345 bits (884), Expect = 6e-93, Method: Composition-based stats. Identities = 155/780 (19%), Positives = 295/780 (37%), Gaps = 121/780 (15%) Query: 55 NLETRLSYLRELEERRQAILKSISEQGKLTDDLA--KAINATLSKTELEDL--------- 103 LE L+E + R IL+ + Q + ++L + EL+DL Sbjct: 395 ALEQTYDKLKE--KTRDDILEEMIRQAQSIEELQDLQDYLNFQYSAELKDLAANDNSAQR 452 Query: 104 --------YLPYKPKRRTRGQI-AIEAGLEP--LADLLW--------SDPSHTPEVAAAQ 144 ++ RR+ G+ P LA + D S P+ A Sbjct: 453 EIKRAGGRTAQFERIRRSNAYKFVQALGITPDRLAKNILRESSKVTSEDDSRLPDDLADT 512 Query: 145 YVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EE 200 V AD + ++ AR +L E + R + + +E Sbjct: 513 LVDAD--FPTGELVINAARQMLAEEMFASPRMRKHFRKNFYGMGIVSCRRTDKGLRKIDE 570 Query: 201 EGAKFRDYFDHHEPLSTV--PSHRALAMFRGRNEGVL--QLSLNADPQFDEPPKESYCEQ 256 + + + ++ + L M + EG++ ++SL D +F + + + Sbjct: 571 ANPYYEVKYLKNMSIADLAVRPELFLKMMKAEEEGLIEIKVSLENDREFRQQLFSDFASE 630 Query: 257 IIMDHL------GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINV 310 + ++ + D K +V + + + EL+ T RE Sbjct: 631 NFSELADKWNAERQKVIDLAFDKLVKVIVK-GVKDSLRTACQDELLKTCRELYFKRLDQA 689 Query: 311 FARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMT 370 + ++ P L + G+ R V +D G+++ T + + + Sbjct: 690 PYKPKGMVIGTTPRVLTLSNGMGDPNREPVSWVSMDEDGRILEHGT-FTNLARDESQREA 748 Query: 371 VAALCEKHNVELVAIGNGTASRETERFYLDVQ------------------KQFPKVTAQK 412 +A L + +++ I +A +T R DV+ ++ + Sbjct: 749 LAELVRRRQPDVIGISGFSA--DTHRLIKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEV 806 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQY 470 +++++ A +Y S A + P L+ R +++AR +Q+P+ E + D S+ + Y Sbjct: 807 IVINDEVARLYKDSPRAVADHPSLNPMTRYCIALARYMQNPMKEYAALGKDVTSLQIHPY 866 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRD 525 Q + Q +L + L+ + D VN VGVD+N A + LL VAGL AQ ++ + Sbjct: 867 QQYLPQAKLLKHLETAMVDMVNLVGVDINVAMQDANTAHLLPYVAGLGPRKAQLLIKGIN 926 Query: 526 ENGQ-FQNRQQLL------KVSRLGPKAFEQCAGFLRI-----NHGDNPLDASTVHPEAY 573 +NG +R +L+ K+ LGP+ + CA FL I N +PLD + +HPE Y Sbjct: 927 KNGGVVTSRDELVGDPERHKLPVLGPRVWNNCASFLFIEYEPTNPESDPLDNTRIHPEDY 986 Query: 574 PVVERILAATQ-------QALKDLMGNSSELRNLKASDFTD------------------E 608 + ++ A +A D G + +R L D D + Sbjct: 987 DLARKVAADALGLDEEDVKAETDENGAGAIVRKLFKDDEQDKVNELILEEYAEQLEREYQ 1046 Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN 663 + T+ I EL+ P + R +F++ E + L GMI+ V V + Sbjct: 1047 QRKRATLETIRAELQVPYEELRKKFESLTVDQVFTMLTGENRDSLCEGMIVAANVRVVKD 1106 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 A V + +G + +S + V+ G +V+ K+++++ + L+MR +E Sbjct: 1107 DFAIVKLDCGIEGRIESHDVSYRH--SIKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEE 1164 >UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5 Tax=Magnoliophyta RepID=B9GLV1_POPTR Length = 1209 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 163/860 (18%), Positives = 309/860 (35%), Gaps = 156/860 (18%) Query: 15 QARPEQVDAAVRLLD-EGNTVPFIARYRKE----ITGGLDDTQLRN-------------- 55 + E + + + D E +PFIA YRKE + L + ++N Sbjct: 122 KINKEDIVRFLEMHDLEKYDIPFIAMYRKEKCLSMLEDLGEDGIQNECSNDTEGKPRLKW 181 Query: 56 ------LETRLSYLRELEERR-------------------------------QAILKS-- 76 + L++R+ I+KS Sbjct: 182 HKILWAINELDRKWLLLQKRKIMLEESYKKRYEEECNNIDDMARLSLINLHFDTIMKSLM 241 Query: 77 ISEQGKLTDDLAKAINATLSKTELEDLYLPYKPK-RRTRGQIAIEAGLEPLADL------ 129 ++E K DD++ + TE E + +K + RR+ I+AGL LA Sbjct: 242 LAETEKDIDDVSMKFSLHFPPTE-EVMEGKFKRRERRSAYSDYIKAGLWELAVKFVYSSK 300 Query: 130 --------------LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAA 175 W D + +PEV A+++ A + +A L GAR+I + + + Sbjct: 301 QFCQHLRQAKMGMDFWEDLNESPEVIASKFTCA--SLETPEAVLKGARHIAALEISCEPS 358 Query: 176 LLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMFRGRN 231 + R + A + + +E + + +PL + L + + Sbjct: 359 VRKHARGFFTDEALVSTRPTPKGAKEIDFCHQFSSVKWLRDKPLGKFQDAQWLRIQKAEE 418 Query: 232 EGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHL 291 E +L++++ P+ SY +I + G D RK ++ + +L L Sbjct: 419 EKLLEVTIRL-PEDSLNKLISYSHKIYLVG-GDDGYTQLWDEQRKLILQDVFSNCLLPSL 476 Query: 292 ETELMGTVRERAEDEAINVFARNLHDLLMAAPA-GLRATMGLDPGL------------RT 338 E E + RA+ + + L + AP R GL+ G + Sbjct: 477 EKETRVLLTTRAKCLVLMEYGEQLWNRASVAPYPHKRNVAGLEEGTGPRVMACCWGPGKP 536 Query: 339 GVKVAVVDATGKLVAT---DTIYPHT------GQAAKAAMTVAALCEKHNVELVAIGNGT 389 ++D+ G+L+ +I + + + V H +++ +G Sbjct: 537 PTTFVMLDSCGQLLDVLQSGSISLRSQNVTGLQRKKYDQLRVHKFIISHQPDVIVLGAAN 596 Query: 390 AS--RETERFYLDVQKQFPKVT--------AQKVIVSEAGASVYSASELAAQEFPDLDVS 439 AS R + V K + E +Y SE++ + P + Sbjct: 597 ASCPRLKDDIKEIVLKIEESSIDADQVLNGIGVIYGDETLPQLYEKSEVSLRHLPGQEGI 656 Query: 440 LRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 ++ AV++ R LQ+PLA + + + S + H ++ + ++ ++ D N V Sbjct: 657 VKRAVALGRYLQNPLAMIATLCGVQKEIVSWKLTSLDHFLTPEEKYGMIEMLMVDITNQV 716 Query: 495 GVDLNTASVPL-----LTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ 549 GVD+N A L V+GL A + NR++L K F Sbjct: 717 GVDINAAVSQDWLSAPLQFVSGLGSQKAAFLQRELAAGKIVNNRKELAICGLTEKKIFFN 776 Query: 550 CAGFLRINHGD--------NPLDASTVHPEAYPVVERILAAT------QQALKDLMGNSS 595 GFLR+ G+ + LD + +HPE+Y + E+++ LK + N Sbjct: 777 AVGFLRVCCGEILSFGCEYDMLDGTRIHPESYGLAEKLVKDVYDDVAEAHPLKHVRNNPQ 836 Query: 596 ELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ET 644 L++ + + D + T+ DI EL DPR ++ + + Sbjct: 837 LLKDFDINAYADNFEIEQGENKKLTLYDIKTELLHGFLDPRRPYEEPTQDEEFCLISGKD 896 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE-DPHTVVKAGDIVKV 703 + G I++ V V + AF + G++ S++ + ++ GDI+ Sbjct: 897 EDAFAEGRIVQAIVCRVLSQRAFCALDSGLIGMITKDDYSDEAADYSLTKRLREGDILTC 956 Query: 704 KVLEVDLQRKRIALTMRLDE 723 K+ ++D R ++ LT + E Sbjct: 957 KIKQIDKSRHQVLLTCKESE 976 >UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7G0_SCHJY Length = 1372 Score = 328 bits (840), Expect = 7e-88, Method: Composition-based stats. Identities = 137/690 (19%), Positives = 259/690 (37%), Gaps = 70/690 (10%) Query: 132 SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL- 190 DP+ P V A QYV + + D L AR I E + R L A + Sbjct: 492 EDPAVPPRVLAEQYVT--EELKDVDHVLSRARRIFAEEIFHEPQFRRHFRVKLLTLAKVD 549 Query: 191 ---VSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 + +E+ ++ + + L + L M + EG++++++ + + Sbjct: 550 IVRTQKGLRKIDEDHPFYKFKYLKDQNLLHIDPVLFLQMLKAEEEGLIKINIKF-FELQD 608 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 +S + + D+ + R+ V+ ++ + R +E Sbjct: 609 DNFKSMLDFMTSDNCSDVAK--AWNEQREMVLRDVLDRTTQ-YMPALIKEMCRSNHLNEL 665 Query: 308 INVFARNLHDLLMAAPAGL----------RATMGLDPG---LRTGVKVAVVDATGKLVAT 354 + L++ L AP + + G V V+ G+ T Sbjct: 666 GMLCRNQLYNKLDQAPYKPSGKNYELGTIPTVVAVSNGQGGPSDAVLCVYVNDLGEPEET 725 Query: 355 DTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERF-YLDVQKQFPKVTAQKV 413 + + + A EK E++ + + S + + V + Sbjct: 726 LKLTDFHDPTNQ--VMFAEFIEKVKPEVIGVSGMSVSANRVKLNVTTALQSKDPVDV--I 781 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQ 471 +V++ A +Y+ SE AA+E P L R V++AR +Q PL E + D S+ ++Q Sbjct: 782 MVNDEVARIYTNSERAAEELPALPSLGRYCVALARYVQHPLLEYAALGRDIMSLSFHKWQ 841 Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDE 526 H + Q L R L++ + D N VG+D+N A +L ++GL AQ ++ Sbjct: 842 HLLPQEMLWRYLESALVDVSNLVGIDINEAVNNKYEASILPYISGLGPRKAQALLKKIAA 901 Query: 527 N-GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD----NPLDASTVHPEAYPVVERILA 581 + G+ R L+ + L K F CA FL I + D + LD++ +H E Y + ++ + Sbjct: 902 HGGRLDTRSDLITKTILTGKIFINCASFLYIPNEDLPKMDILDSTRIHNEDYELARKMAS 961 Query: 582 A-------------TQQALKDLMGNSSELRNLK---ASDFTDE------KFGVPTVTDII 619 +Q+ + + S+E+ L ++ D+ T+ I Sbjct: 962 DALELDEEDIEEYESQKGVVYHLITSNEVDKLDDLVLEEYADQLEREFHHLKRNTLERIR 1021 Query: 620 KELEKPGRDPRPEFKTAQFADGVET-----MNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 +EL+ P + R F ++ + DL P I+ V VT+ V + Sbjct: 1022 RELKDPYGERRNLFHILTPSEIFLMLTGIELTDLPPNTIVPVNVKRVTSRYVAVKLDCGI 1081 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 DG + +S+ + P +++ G V+ +L +D L+MR T + Sbjct: 1082 DGNITAEEVSDDHIP-PPQLLQTGQTVEAVILTLDEVNFTAELSMR--PYAIRTASETSK 1138 Query: 735 GNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 + + A+ R +E A A A Sbjct: 1139 YSFSAWDWDFEAEKRDKEKMLAETQAEQRA 1168 >UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leotiomyceta RepID=SPT6_GIBZE Length = 1408 Score = 326 bits (835), Expect = 3e-87, Method: Composition-based stats. Identities = 148/799 (18%), Positives = 297/799 (37%), Gaps = 130/799 (16%) Query: 48 LDDTQLRNLETRLSYLRELEERRQAILKSISE-QGKLTDD--LAKAINATLSKTELEDL- 103 L+ L + R ++R A+ K++ +G D + + I + EL+DL Sbjct: 378 LNQDDLWKILELDIKFRSFVDKRNALEKTVDNLKGMEIHDAMVDEMIPEATTMEELQDLQ 437 Query: 104 -YL--PYKPKRRTRGQIA----------------------------IEAGL--EPLA-DL 129 YL Y + + +A G+ + LA + Sbjct: 438 DYLHFQYGQQLKDLAALAGNLSLTKRPGSKSNLLERVRQGKAYGFVRAYGISADQLAKNA 497 Query: 130 LWSDPSHTPEVAAA-----QYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L TP+ A D + + AR + E + R+ Sbjct: 498 LRHGKKVTPDDDAQYPMDLADSLIDDVFSTGDQVISAARQMYSEELFASPRMRKHFRNSY 557 Query: 185 WKNAHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTV--PSHRALAMFRGRNEGVLQLS 238 ++ A + ++ + + ++ ++ + L M + EG++ + Sbjct: 558 YQAAEISCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGLVTIK 617 Query: 239 LNADPQFD-------EPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHL 291 L+ ++D E E++ ++ + A + +++ + + Sbjct: 618 LDMPARYDFRQHLYQEFESENFSDRAEQWREERKKVLDLAYPKLEKIIAKNVKEVIRTFC 677 Query: 292 ETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGL-DPGLRTGVKVAVVDATGK 350 + E++ RE + +L P L + G+ DP A V+ G+ Sbjct: 678 QDEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMSDPARDPIC-WAWVEEDGR 736 Query: 351 LVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ-------- 402 ++ + + + + L ++ +++ + +A ET + D++ Sbjct: 737 VIEQGKL-GNLARDERQREEFEELVKRRRPDVIGVSGWSA--ETTKLVRDLEGLVNEKGL 793 Query: 403 ----------KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQD 452 + + V+V++ A +Y S A E P L+ R V++AR +Q+ Sbjct: 794 MGPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPITRYCVALARYMQN 853 Query: 453 PLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPL 505 P+ E + D S+ Q+ + +LA+ LD+ + D VN GVD+N A + L Sbjct: 854 PMKEYAALGKDVSSLSYHPCQNLLPADKLAKYLDSAMVDMVNLCGVDINEAMNDTYTANL 913 Query: 506 LTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLL------KVSRLGPKAFEQCAGFLRI-- 556 L V+GL A +++ + N G R +L+ K+ +GP+ + CA FL I Sbjct: 914 LPYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSGKLPVVGPRVWNNCASFLFIEY 973 Query: 557 ---NHGDNPLDASTVHPEAYPVVERILA-ATQQALKDLMGNSSE---------------- 596 N +PLD + VHPE Y + ++ A A + +D+ G + E Sbjct: 974 EATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKGETDENGPGAIVRKLFKMDEQ 1033 Query: 597 --LRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----E 643 + L ++ ++ + T+ I EL+ P + R F ++ E Sbjct: 1034 DKVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFALLSASEIFTMFTGE 1093 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T + L GMI+ V V + A V + +G V +S++ V+ +G + Sbjct: 1094 TKHTLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRVEGHEVSHR--SSIKEVLSSGQTSQA 1151 Query: 704 KVLEVDLQRKRIALTMRLD 722 K+L+++ + L+MR D Sbjct: 1152 KILDINYKDFMAKLSMRED 1170 >UniRef50_C5Z0A7 Putative uncharacterized protein Sb09g024270 n=1 Tax=Sorghum bicolor RepID=C5Z0A7_SORBI Length = 1687 Score = 323 bits (828), Expect = 1e-86, Method: Composition-based stats. Identities = 154/909 (16%), Positives = 306/909 (33%), Gaps = 205/909 (22%) Query: 16 ARPEQVDAAVRLLD-EGNTVPFIARYRKE----ITGGLDDTQ------------------ 52 + + V +L +PFIA YRKE + LD + Sbjct: 362 IDQKDIVNVVTMLHVNKFEIPFIAMYRKENCPTLLKSLDSDEGNEDNEDNKDNESDARKM 421 Query: 53 -----LRNLETRLSYLRELEERR-------------------------------QAILKS 76 L ++T L++R+ +I+++ Sbjct: 422 KWHKLLWAVQTLDRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIEA 481 Query: 77 IS--EQGKLTDDLAKAINATLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLADLL--- 130 + + K +D+ N E+E+ +K PKR++ I +AGL +A+ Sbjct: 482 LKDAKSEKEVEDVDAKFNLHFPPGEVEE-EGQFKRPKRKSLYSICHKAGLWEVANQFGRS 540 Query: 131 ------------------WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAE 172 H+PE AA + A + L GAR++ Sbjct: 541 AEQLGHHLTLTKIPEAGELESGRHSPEEVAANFTCA--MFETAQDVLRGARHMAAVEIGC 598 Query: 173 DAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRD----YFDHHEPLSTVPSHRALAMFR 228 + + VR A + ++ + + +PLS + L + + Sbjct: 599 EPIVRKHVRGIFMNKAVVSTSPTPEGNTIIDPYHQLSGVKWLREKPLSKFVDAQWLLIQK 658 Query: 229 GRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVL 288 E +L++++ + E + D + + D RK ++ + +L Sbjct: 659 AEEEKLLKVTVKLPEDAKKKLMSEARENYLSDCVSK--SAQLWDEQRKMILDDAFFNFLL 716 Query: 289 MHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR-----------------ATMG 331 +E E + +A+ + + L + + AP + M Sbjct: 717 PSMEKEARSLLTAKAKHWLHMEYGKQLWNNVTVAPWKKKDADKKDADIDLDDESELRVMA 776 Query: 332 --LDPGLRTGVKVAVVDATGKLVATDTIY-----------PHTGQAAKAAMTVAALCEKH 378 PG + ++D++G+LV D +Y + V H Sbjct: 777 CCWGPG-KPATTFVMLDSSGELV--DVLYAGSISNRSQGVAEQQRKKNDQQRVLKFMTDH 833 Query: 379 NVELVAIGNGTAS-------------------------------RETERFYLDVQKQFPK 407 +V +G + R E DV Q Sbjct: 834 QPHVVCVGASNYNCRQLKDDIYELQALSLFLKFHFTKVLKVVIFRIVEDHPRDVNPQMEN 893 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DP 462 ++ V E+ +Y S +++ + P ++ AV++ R LQ+PLA + + + Sbjct: 894 LSV--VYGDESVPRLYENSRISSDQLPGQPGIVKRAVALGRYLQNPLAMIATLCGPGKEI 951 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMA 517 S + + ++ + ++ V+ D N +G D+N A+ L +AGL A Sbjct: 952 LSWKLHALEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQFIAGLGPRKA 1011 Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTV 568 + G +R++L+K LG K F +GFLR+ + L+ + + Sbjct: 1012 SALQKDLVREGSIFSRKELVKP--LGRKVFMNASGFLRVRRSGAAAASAQLIDLLEDTRI 1069 Query: 569 HPEAYPVVERILAAT-----------------QQALKDLMGNSSELRNLKASDF----TD 607 HPE+Y + + + + A++ + LR+LK ++ ++ Sbjct: 1070 HPESYVLAKNLAKDVYVEDAQHEINEMDDDEQEMAIEHVREKPDWLRSLKIEEYVKSISE 1129 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVT 662 E + T+ DI +EL D R + D ET + + G I++ V N+ Sbjct: 1130 EYRKLETLRDIRRELLSGFSDWRTPYTEPSPDDEFWMLSGETEDTISDGRIVQVTVRNIQ 1189 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 +V + S++ + + ++ GD++ K+ V+ R + LT + Sbjct: 1190 ENKIICTFDSGLKAIVMADNYSDEGFDLESSQLREGDVLTGKIRNVNKNRFMVYLTCKAS 1249 Query: 723 EQPGETNAR 731 E +R Sbjct: 1250 EMRRRPFSR 1258 >UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S4Y8_NEMVE Length = 717 Score = 313 bits (803), Expect = 1e-83, Method: Composition-based stats. Identities = 155/453 (34%), Positives = 217/453 (47%), Gaps = 83/453 (18%) Query: 344 VVDATGKLVATDTIYP--HTGQAAKAAMTVAAL-------------CEKHN--------- 379 V GK++ IYP + +A V + ++ Sbjct: 250 FVGGPGKVLEVGVIYPIGRKTKRQEAEDRVKEMERFWRWESYILLAVKQRGRRLRTESRR 309 Query: 380 -VELVAIGNGTASRETERFYLDVQK--QFPKVTAQKVIVSEAGASVYSASELAAQEFPDL 436 E +AIGNG RE E F D+ K F + + IVSE GASVYSAS A E P+L Sbjct: 310 WCETIAIGNGVGCREAETFISDLIKSKAFHPLDPRYCIVSEDGASVYSASNEAMLELPNL 369 Query: 437 DVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGV 496 ++S+RGAVS+ RRLQDPL ELVKI+PK +G+G YQHD+ + L L V+ DCV+ VG Sbjct: 370 EISMRGAVSLGRRLQDPLLELVKIEPKHLGIGMYQHDIPEVLLRAALQGVLTDCVSFVGA 429 Query: 497 DLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 DLN A V LL ++GL AQ IV +R++N F NR QLL+V +G K +EQC GF+R+ Sbjct: 430 DLNAAGVSLLKCLSGLNEKRAQAIVEYREKNNGFVNRAQLLEVKGIGEKTYEQCVGFVRV 489 Query: 557 NHG------------------------------------------DNPLDASTVHPEAYP 574 NPLD + +HPEAY Sbjct: 490 RAAAAQTPAGDVICLDSDDEEEEAIGRKRKKRGENTSKKKARALKPNPLDMTPIHPEAYG 549 Query: 575 VVERILAATQQALKDLMGN------SSELRNLKASDFTDE-KFGVPTVTDIIKELEKP-G 626 ER + +D+ SS+L+ + + K + II L + Sbjct: 550 AAERFMELVGVRPRDIGKPNIRTAISSKLQAQSLEKISGQLKVTPEALQLIIDGLGQAVD 609 Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 D R F+ F G+ D++PG L G V+NVT FGAFVD G+ +DGL+H S ++ + Sbjct: 610 FDIRDGFERPLFKKGLTKFEDVRPGHELTGRVSNVTTFGAFVDCGIGRDGLIHTSRMAGR 669 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + AGD+V+VKV+ D + + L + Sbjct: 670 ------DDLGAGDVVEVKVISKDETKGHVNLQL 696 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 74/308 (24%), Positives = 139/308 (45%), Gaps = 15/308 (4%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 D +II+ +Q V + LLD NT+PFIARYRKE +GGLD LR+++ + Sbjct: 7 KDKCAQIISQNLQLDENVVSRILVLLDNDNTIPFIARYRKEHSGGLDPAVLRHIDGQYQL 66 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEA 121 L+E++++ ++ K I +Q LT ++ +A++ S E+++++ P+K K+RT A + Sbjct: 67 LKEVQKKAESTKKKIGDQ--LTIEIREALDNAQSVEEVDEIFGPFKKGKQRTLAGRARQL 124 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+ A+ + P V +V D KG+++ K G +++L E ++D + + Sbjct: 125 GLDVAAERVLVHPQS---VNLRDWVKKDTKGLSNIKEVSTGVQHVLAETISKDPSTSESL 181 Query: 181 R----DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 + + L + E E K++ Y P++ + SH+ RG L+ Sbjct: 182 KALMEGCITLETSLSRSASKKTEAEVNKYKQYHAFKMPITRLRSHQ--ETLRGCFLLPLK 239 Query: 237 LSLN--ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETE 294 + +F P + +I D ++ W W +L+ ++ Sbjct: 240 MHTVDFLSLEFVGGPGKVLEVGVIYPIGRKTKRQEAEDRVKEMERFWRWESYILLAVKQR 299 Query: 295 LMGTVRER 302 E Sbjct: 300 GRRLRTES 307 >UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditis RepID=SPT6H_CAEEL Length = 1521 Score = 311 bits (796), Expect = 9e-83, Method: Composition-based stats. Identities = 170/910 (18%), Positives = 307/910 (33%), Gaps = 207/910 (22%) Query: 36 FIARYRKEITGGL-DDTQLRNLETRLSYLRELEERRQAI---LKSISEQGKLTDDLAKA- 90 FI YRKE L L + L E++ I ++ + E +L+DDL Sbjct: 369 FIGFYRKEDIDNLLTMNNLWRVYDFDEKWCHLSEKKNKIYDLMRRMREYQELSDDLTAKR 428 Query: 91 ----------INATLSKTELEDLYL----------------------------PYKPKRR 112 + +L D++ Y+ K + Sbjct: 429 RPISDADLMDTKYAETLEQLTDIHANFQLLYGALLDDMIRWEKGRLTGEEEEQEYRVKFK 488 Query: 113 T-----RGQIAIEAGLEPLADLL-----------------WSDPSHTPEVAAAQYVYADK 150 + + Q+ +E G+ LA P AA +YV Sbjct: 489 SSIRNDKYQMCVENGIGELAGRFGLTAKQFSENLNWKKHDIEQDPMLPLEAAEEYVCP-- 546 Query: 151 GVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK----FR 206 +D+ L+GA+++L + + + VR ++AH + + + Sbjct: 547 AFSDSDMVLNGAKFMLAKEISRQPQVRHSVRQEFRQSAHFWIKPTKKGRDTIDQTHPLYD 606 Query: 207 DYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE----SYCEQIIMDHL 262 + +P+ ++ + L + + +G++ + + + + D+ Y I Sbjct: 607 KRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLVNKYLSDSIFQKD 666 Query: 263 GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 N +S R V+ ++ ++ EL T+ E A+ + + + Sbjct: 667 EYTENVEQWNSVRDECVNMAITEMLVPYMRDELYNTILEEAKTAVAKKCRKEFASRISRS 726 Query: 323 PA-----------------GLRATMGL-DPGLR-TGVKVAVVDATGKLVATDTIYPHTGQ 363 G R M + P R +VD G +V + T + Sbjct: 727 GYLPDFDNNDDDDDGMDQHGARRIMAVCYPTERDEASFGVMVDENGAIVDYLRMVHFTKR 786 Query: 364 A----------AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 A++ ++ AIG E R D+++ + +Q + Sbjct: 787 TFGGGNNGLRKAESMDLFKKFVQRRKPH--AIGLNIEDMECTRLKRDLEEAVADLFSQNL 844 Query: 414 I--------VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----- 460 I + A VY S ++ E PD +LR A+S+AR L DP+ E + Sbjct: 845 IYKPIPVFLMDNEAAKVYMRSNVSLAENPDHPPTLRQALSLARLLLDPIPEYAHLWNIDE 904 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRM 515 D + + Q D+ Q QLA L + + VN GVD+N + +L GL Sbjct: 905 DIFCLSLHPLQRDIDQEQLALVLSHELVNKVNEEGVDINKCAEFPHYTNMLQFTCGLGPR 964 Query: 516 MA-QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDA 565 A + + + + ++R +L+ +LGPK F CAGF++I+ LD Sbjct: 965 KATDLLKSIKANDNLIESRSKLVVGCKLGPKVFMNCAGFIKIDTIKVSEKTDAYVEVLDG 1024 Query: 566 STVHPEAYPVVERIL---------AATQQALKDLMGNSSELRNLKASDFTDE----KFGV 612 S VHPE Y ++ A AL+++M + LR+L F DE FG Sbjct: 1025 SRVHPETYEWARKMAVDALEVDDSADPTAALQEIMESPDRLRDLDLDAFADELSRQGFGE 1084 Query: 613 P--TVTDIIKELEKPGRDPRPEFKTAQ----FADGVETMNDLQPGMILEGAVTNVT---- 662 T+ DI EL +D R F+ + + +++ G + G V +V Sbjct: 1085 KKSTLYDISSELSARYKDLRQPFQEPTGELLYDLLARSGKEIREGAKVLGTVQSVQYRKV 1144 Query: 663 -------------NFGAF-------------------------------------VDIGV 672 G F V Sbjct: 1145 DKDAADSMLPDVGEDGLFTCPCCKSFTSSAPGGIQEHMLGDSRQGGCPGTPVGIRVRFDN 1204 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 G ++S+ V++P T VK KVL++D +R + L+ + + + ++R Sbjct: 1205 GMTGFCPNKNISSSHVDNPLTRVKINQPYYFKVLKLDKERFSLFLSCKSSDLKEDDLSQR 1264 Query: 733 GGGNERPQNN 742 + Q Sbjct: 1265 DQYWDEHQYQ 1274 >UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia malayi RepID=A8PCB0_BRUMA Length = 1512 Score = 310 bits (795), Expect = 1e-82, Method: Composition-based stats. Identities = 181/949 (19%), Positives = 333/949 (35%), Gaps = 213/949 (22%) Query: 10 IAGEIQARPEQVDAAVRLLDEGN-TVPFIARYRKE-ITGGLDDTQLRNLETRLSYLRELE 67 IA E P+++ A++ + VPFIA YRKE + L L + L+ Sbjct: 360 IAAEA---PDKIKEALKFIRNQLFEVPFIAFYRKEYVESCLVINDLWKVYQWDEKWCHLQ 416 Query: 68 ERRQAILKSISEQ-------------GKLTDDLAKAINATLSKTELEDL-------YLP- 106 +R++ +L+ + +T+ ++ + L D+ Y P Sbjct: 417 QRKKRLLELMKRMLNYQMENDNAAGMRIVTEQDMNEVHGVQTVEGLMDVSTKFQLYYGPE 476 Query: 107 --------------------------YKPKRRT----------RGQIAIEAGLEPL--AD 128 ++ RT +A GL PL A+ Sbjct: 477 VPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCIQNGLSGMASRFGLTPLQFAE 536 Query: 129 LL------WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 L P AA QYV + +A L GA +++ ++ + + + +R Sbjct: 537 NLDWKRHDIVQDDEEPLKAAEQYVC--QSFPTPEAVLTGAIHVVAKQLSREPKVRELLRL 594 Query: 183 YLWKNAHL-VSTVVSGKEEEGAKFRDY---FDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 + V G+EE + + + +P++ + L + G+L L Sbjct: 595 RYRLRLKISVCPTKKGREEIDENHKLWPRRYVRDKPVANLRHDEYLWYVQAHASGLLNLK 654 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLN-NAPADSW---RKGVVSWTWRIKVLMHLETE 294 L+ D + D +++ ++ + + R + D W R+ VV+ +L E E Sbjct: 655 LHCDTEDDIRFEKTMLQEFLSEQPYHRDEYSRVVDMWNKIREEVVTVCVNNFLLPVFERE 714 Query: 295 LMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTG--------------- 339 + + A+D I +NL+D + A R D +G Sbjct: 715 AHERLLQEAKDYVIKQSTQNLYDRIKTAAY--RNVHDDDDDFESGFAGGTKVLSIVYPEE 772 Query: 340 ----VKVAVVDATGKLVATDTIY-----PHTGQAAKAAMT------VAALCEKHNVELVA 384 A++D G+++ + ++ ++ +A + + EK ++A Sbjct: 773 RDQASFCALIDQDGQILDHLRLVHITKSMNSKRSDEAELKRQDMIHLRKFIEKRRPHVIA 832 Query: 385 IG--NGTA---SRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 I N A R+ E ++ +++ + IV A +Y S+ A EF + Sbjct: 833 ICGENMDAYYLRRDIESLLHEISGIAKEISVE--IVDNEAAKIYMHSKQAITEFSNYPPM 890 Query: 440 LRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 LR AVS+ R L DPL E + D + Q +V++ +L L + VN V Sbjct: 891 LRQAVSLGRLLLDPLIEYAHLCNTDDDILCVSYHPLQSEVNKDELLFALSLEFINRVNEV 950 Query: 495 GVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDENGQ-FQNRQQLLKVSRLGPKAFE 548 GVD+N + LL V GL A +++ +N ++R +L+ + R+GPK F Sbjct: 951 GVDVNRCLEYSHTSYLLQFVCGLGPRKAVHLLKILKQNDNLLESRTKLVTLCRMGPKVFM 1010 Query: 549 QCAGFLRINHGD---------NPLDASTVHPEAYPVVERI---------LAATQQALKDL 590 AGF++I+ LD S VHPE Y ++ A AL+++ Sbjct: 1011 NSAGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDDAADPTSALEEI 1070 Query: 591 MGNSSELRNLKASDFTDE----KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGVET 644 + N +L++L F +E FG T+ DI EL +D R +++ Sbjct: 1071 LQNPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRYKDLRIPYESPSAERIFTM 1130 Query: 645 MNDLQ---PGMILEGAVTNV---------------------------------------- 661 + G ++ G V ++ Sbjct: 1131 LTKETSDSIGKLVMGRVMHIVYRKPRDPEERERVPPIRDERTGQWKCQYCYKPDFNNTNE 1190 Query: 662 ----------TNFGAFVDIGVHQDGLVHISSLSNKFVE--DPHTVVKAGDIVKVKVLEVD 709 G V G + LS++ DP V+ + ++LE+D Sbjct: 1191 VWQHIDSCPGQPVGVKVRFDSGITGFIPNKYLSDRPDSFVDPSERVRRNQPIYCRILELD 1250 Query: 710 LQRKRIALTMRLDE----QPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 + + R + QP + R + Q++ K + + Sbjct: 1251 PDKFSATCSCRSSDLRGLQPQNSEFDRYFDKLKCQDDDEKDKKLREQRK 1299 >UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eurotiomycetidae RepID=SPT6_ASPOR Length = 1422 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 137/722 (18%), Positives = 261/722 (36%), Gaps = 106/722 (14%) Query: 132 SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLV 191 DP+ PE A +V D ++ + A+ + E + +R + N + Sbjct: 515 EDPAERPEEMADGFV--DNDFSNASHVIKAAKSLFAEEIVMSPKMRKVIRQAYYMNGAVD 572 Query: 192 STVVSGK----EEEGAKFRDYFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQF 245 +E+ + + ++ LS + L M + EG++++ + + Sbjct: 573 CFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYLRMLKAEEEGLVEVKVRF--EN 630 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSW---RKGVVSWTWRIKVLMHLETELMGTVRER 302 + ++ I D+ AD W R+ V+ K+ + + +R+ Sbjct: 631 FDQFRQRLYPDIESDNYSE-----IADGWNRSRRDVLDMALG-KLERLINRSVKENIRQE 684 Query: 303 AEDEAINVFARNLHDLLMAAPAGLR--------ATMGLDPG----LRTGVKVAVVDATGK 350 E+ L AP + + L G R + A ++ G+ Sbjct: 685 CENHVAKECRETFSQRLDQAPYKPKGMVLGTVPRVLALSTGSGVVGREPIHWAYIEEDGR 744 Query: 351 LVATDTIYPHTGQAAKA-------AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK 403 ++ + L ++ +++ + S ET R Y + + Sbjct: 745 VLENGKFVDLSIGDRDRNIPDGKDVEAFVELVDRRRPDVIGVSGM--SPETRRLYKLLAE 802 Query: 404 QFPKVTAQK-----------------VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSI 446 K + +IV++ A +Y SE A ++ P V++ Sbjct: 803 VVDKKDLRGAPYTDDHDEEISDRLEVIIVNDEVARLYQHSERAKKDHPSFAPLTHYCVAL 862 Query: 447 ARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA--- 501 A+ LQ PL E + D SI Q V+Q L ++L+ + D VN VGVD+N A Sbjct: 863 AKYLQSPLKEYASLGRDIVSIQFKPGQQLVTQELLLKQLETALVDMVNLVGVDINEAVTD 922 Query: 502 --SVPLLTRVAGLTRMMAQNIVAWRDENGQ-FQNRQQLLKV----SRLGPKAFEQCAGFL 554 + LL V GL A +++ + NG NR +LL V +G K + CA FL Sbjct: 923 SSTANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVNAQYPAMGVKVWNNCASFL 982 Query: 555 RI-----NHGDNPLDASTVHPEAYPVVERILAATQQ-------ALKDLMGNSSELRNLKA 602 I + +PLD + VHPE Y + ++ A + A D G + +R L Sbjct: 983 YIDFENVDPDADPLDNTRVHPEDYDIARKMAADALELDEEDIKAETDENGTGAIVRKLFR 1042 Query: 603 SDFTDE------------------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-- 642 + D + T+ I EL++P + R ++ D Sbjct: 1043 EEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPYEELRKQYVFLSTDDIFTM 1102 Query: 643 ---ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 ET + L GM++ ++ V++ + D LV S L++++ + Sbjct: 1103 LTGETSDTLAEGMVVPISIKRVSDDHIDGKLDCGIDALVPESELTDRYDIPVRALYSPHQ 1162 Query: 700 IVKVKVLEVDLQRKRIALTMRLDE--QPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 V K+L ++ + +++R ++ +P R G + + + + Q G Sbjct: 1163 TVSAKILFLNRKNFTCNVSLREEQVSRPVSNTQDRLRGEWDERQEQQDRESLQEKTQSGG 1222 Query: 758 NS 759 + Sbjct: 1223 RT 1224 >UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A210 Length = 913 Score = 308 bits (789), Expect = 5e-82, Method: Composition-based stats. Identities = 126/621 (20%), Positives = 228/621 (36%), Gaps = 89/621 (14%) Query: 132 SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL- 190 +P A Y+ + D + L ARY++ + A D + VR ++ A + Sbjct: 257 EQHQDSPLEVATDYLSSK--FKDEEGVLQAARYMVALQIAHDPLVRQCVRQTYYERAKIS 314 Query: 191 ---VSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP---Q 244 + +E F + ++ + + + L + + + ++ ++++ D Sbjct: 315 VRPTKKGIKEIDESHPIFGSKYLKNKQVKDLLQDQYLKLVQAEKDKLITMTMSIDMAQGT 374 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSW--RKGVVSWTWRIKVLMHLETELMGTVRER 302 +Y E++ + R G + + + L EL + Sbjct: 375 STSYTSTTYFEEMKQLYYLDEFRTEVQAWNKERSGALEMALQSILYPQLAKELKTKLVAE 434 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDP----------GLR-----------TGVK 341 A++ I + + L P + M D GLR Sbjct: 435 AKEGIIKQCCTKMFNSLKVMPHQVDQPMEEDEDDYMDGNSRMGLRVMGFSFTSDMDNAAF 494 Query: 342 VAVVDATGKLVATDTIYPHTGQAAKA------------AMTVAALCEKHNVELVAI---G 386 ++D+ G++ + PH + A ++ ++A+ G Sbjct: 495 CCMLDSEGEVTDFLRL-PHFLRRRNAFYQRDRDLKQADVESLKNFISTQKPHVLALASEG 553 Query: 387 NGTAS--RETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAV 444 T S ++ + D++ + + ++ A+VY AS+L EF D LR AV Sbjct: 554 KNTTSVLQDIKGCIEDLESEQQMAPIKVQLIDSNVAAVYQASKLVETEFRDYPPLLREAV 613 Query: 445 SIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 SIARRLQDPL E ++ D + + Q VSQ +L + VN VGVD+N Sbjct: 614 SIARRLQDPLIEFSRLCNPDDDILCLKLHPQQDAVSQEELKEAMFQEFIYRVNEVGVDIN 673 Query: 500 TA-----SVPLLTRVAGLTRMMAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGF 553 A + ++ V GL ++V + +N + NR QL+ +LGPK F CAGF Sbjct: 674 RAITHPHTASIVQFVCGLGPRKGNSLVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGF 733 Query: 554 LRINHGD----------NPLDASTVHPEAYPVVERIL------------AATQQALKDLM 591 L+I+ LD++ +HPE Y ++ A +AL++++ Sbjct: 734 LKIDTASAGDGADDTYIEVLDSTRIHPETYEWARKMAVDALEYDEAADDANPAEALEEIL 793 Query: 592 GNSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 N +L++L F +E T+ DI EL +D R F + + Sbjct: 794 ENPDKLKDLDLDAFAEELERQGYGNRSITLYDIRAELNSRYKDLRTPFHPFTPEEAFSIL 853 Query: 646 NDLQPGMILEGAVTNVTNFGA 666 P G + G Sbjct: 854 TKETPETFYRGKMVTCKVTGI 874 >UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VJC0_NAEGR Length = 1296 Score = 308 bits (788), Expect = 6e-82, Method: Composition-based stats. Identities = 159/866 (18%), Positives = 308/866 (35%), Gaps = 155/866 (17%) Query: 34 VPFIARYRKEITGGL-------DDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTD- 85 +P+IA+Y+KE + +D L + L+ ++ LK + + K Sbjct: 255 IPYIAQYKKEDFEHILYKDSFGNDRDLWKIFEWDEKWCILQSKKSK-LKLLYDNAKSVIP 313 Query: 86 -DLAKAINATLSKTELEDLYLPY----------------KPKRRTRGQIAIEAGLEPLAD 128 + + + E+ D +L + +P +R +A + GL LA Sbjct: 314 TEYLAYFEGSETLDEINDYHLHFTTVLNEESENQLTTLKRPTKRDLYTMAKKEGLAILAS 373 Query: 129 L-----------------LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFA 171 + H + A+A V+ + ++ L GAR+I + A Sbjct: 374 QMSLSSYQYAENLESTFQIVETQDHALDPASAAEVFKTRTFESIESVLGGARHICAFQIA 433 Query: 172 EDAALLAKVRDYLWKNAHLVSTV-VSGKEEEG--------------AKFRDYFDHHEPLS 216 + + VR N+ + + GK EG KFRD + H + Sbjct: 434 HEPKIRQLVRRCFENNSTIKVKLTKKGKSVEGSDIISLLEDGRTMFTKFRDEWAAHVRYA 493 Query: 217 TVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK 276 L + + N G++++SL + + + ++ + H + + R Sbjct: 494 HDNKESFLKLLKYENLGLIKVSLFLEDRHFDGLLKADVLYLSQKHSQIA---TLWNEQRI 550 Query: 277 GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMA-APAG--LRATMGLD 333 ++ + + ++ + +R +A D ++ NL +L +P G RA D Sbjct: 551 KIIEEA-KGILNKTIQHSVKTILRNKAADFVSDLCESNLTKMLFEESPYGNNPRAKFDYD 609 Query: 334 -------------------PGLRTGVK--VAVVDATGKLVATDTI---YPHTGQ------ 363 PG G K ++D G ++ +PHT Sbjct: 610 EFFEDEKPRPTKYKILSCVPGGEEGEKTTWVMLDENGTMIDKKVWPIGHPHTTGNTSDSD 669 Query: 364 ---AAKAAMTVAALCEKHNVELVAI--GNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 +V + H +VA+ G ++ + + ++ IV + Sbjct: 670 RQLIDSMVKSVNDMIASHQPSVVALAACGGLIFKKMKEAFERTKQGGTIFNINYEIVPDD 729 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----DPKSIGVGQYQHDV 474 A +Y S A E+P + +R A+S+ RRL+DPL E+ + + + Q V Sbjct: 730 IARIYENSSRATNEYPQENNVVRRAISVGRRLRDPLTEICGLFNNEELLCYKFHELQDMV 789 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQNIVAWRDENGQ 529 + QL + L+ + VN VGV++N P L ++GL A+ ++ + Sbjct: 790 PKEQLVKSLEKSLVRVVNRVGVEINRIVLFPQLQPTLRFLSGLGPRKAELLINKIKQEDS 849 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRIN------------HGDNPLDASTVHPEAYPVVE 577 +R+ + + GFL + +DA+ VH +YP+ + Sbjct: 850 VSDRESINNILNEQRNVALNSIGFLIVRRPPTIAARDSMARAFKVIDATRVHLLSYPLAK 909 Query: 578 RILAA-------TQQALKDLMGNSSELRNLKASDFTDE----KFGVP--TVTDIIKELEK 624 ++ + + + L L + DE +G T+ DI +EL+ Sbjct: 910 KMAEDGLETENLKTEKIHKIFKKPQALDELDLDAYADELEKRNYGKTHITLKDIKEELKY 969 Query: 625 PGRDPRPEFKTAQFAD-------GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 P +DPR EFK+ D ET L PG + V V F + +GL Sbjct: 970 PFKDPRYEFKSINNDDEKVFELVTHETKKSLAPGQQVFATVVTVGERIIFCKLD---NGL 1026 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 + +L N+ V ++ G+ ++ V+ ++ ++ L P + + Sbjct: 1027 YGVIALYNRNVS-----LREGEERYFEIERVEYKQFKVHL------VPPKEDIYAPKAES 1075 Query: 738 RPQNNRPAAKPRGREAQPAGNSAMMD 763 +R +A + R + + D Sbjct: 1076 IMDQHRKSAPSKKRFHRQIDHPQFKD 1101 >UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MUJ5_9CHLO Length = 505 Score = 293 bits (751), Expect = 1e-77, Method: Composition-based stats. Identities = 128/263 (48%), Positives = 163/263 (61%), Gaps = 10/263 (3%) Query: 328 ATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAM-------TVAALCEKHNV 380 +G+DP RTG K+A VDATG +VAT +Y + A + A E H Sbjct: 6 VVVGVDPAFRTGCKLAAVDATGAVVATGVVYLPGFEPRGARTPGTPAPAALRAFVEAHGA 65 Query: 381 ELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSL 440 +AIG+G +RE E+ D +VSEAGASVYSAS LA +E P LDVS Sbjct: 66 TAIAIGDGQGTREAEKLVADAN---LGDAVGWRVVSEAGASVYSASPLAVEELPSLDVSS 122 Query: 441 RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT 500 RGAVSIARRLQDPL+ELVKIDP+S+GVG YQHDV + +LA +L AVVE V GV++NT Sbjct: 123 RGAVSIARRLQDPLSELVKIDPQSLGVGLYQHDVKEAELAGELSAVVESAVAEAGVNVNT 182 Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS LL RV GL++ +A I + RD NG F +R LL+V LG K F QCAGFLR++ Sbjct: 183 ASASLLARVPGLSKSIAGKIASHRDANGAFADRAGLLRVRGLGAKTFTQCAGFLRVDGAA 242 Query: 561 NPLDASTVHPEAYPVVERILAAT 583 + L+ ++VHPE+Y + L Sbjct: 243 DALEMTSVHPESYDLARAALREI 265 Score = 88.5 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 44/108 (40%), Positives = 54/108 (50%), Gaps = 12/108 (11%) Query: 624 KPGRDPRPEFKTAQF-ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 KPG D R A T DL G +L+G V NV FGAFVD+GV GLVH S+ Sbjct: 396 KPGADDRRGADRASLLRTHAATAKDLGVGDVLDGVVRNVVPFGAFVDVGVGDSGLVHRST 455 Query: 683 LSNKFVE-----------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 L +PH V +AG V+VKV +DL R RI+L + Sbjct: 456 LGAGSAGAGGGGGGRGRPEPHDVFRAGQSVRVKVTGLDLARGRISLAL 503 >UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S561_TRIAD Length = 1541 Score = 291 bits (746), Expect = 6e-77, Method: Composition-based stats. Identities = 144/898 (16%), Positives = 280/898 (31%), Gaps = 241/898 (26%) Query: 21 VDAAVRLL-DEGNTVPFIARYRKEI-TGGLDDTQLRNLETRLSYLRELEERRQAILKSIS 78 V + L+ +EG +PFIA YRKEI L L + R+Q + K + Sbjct: 310 VREILALIRNEGLEIPFIAHYRKEIYRHSLQVDDLWRIYNWDIKWMYFSRRKQNMAKLFA 369 Query: 79 E-------QGKLTDDLA------------KAINATLSKTELEDLYLPY------------ 107 + + K T D + + + EL+D+Y + Sbjct: 370 KVQQYQYDKAKNTHDFSTFNAKIIDAEDTARLEECNTYEELQDVYTHFLLYHHKELEDLR 429 Query: 108 --KPKRRTRGQ-----------------------------------IAIEAGLEP----- 125 K+ T +A++ GL P Sbjct: 430 NDASKKTTNSDDKNQSDNNEKRSGESIRRLRRRNFYTRCEDNKISHLALKFGLSPERFGK 489 Query: 126 -LADLLWSDPSHTPEV--AAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 + + + E+ Y K +A LD A Y + + + D + VR Sbjct: 490 NVIESYQINEPTQYEIDPNTTARDYITKAFPTVEAVLDAAVYTVAVQLSRDPLVRRAVRL 549 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 ++ A + + + EG + + + + Sbjct: 550 AFYERAKISCRPTKRGK----------------------------KAEKEGFITHTFSVE 581 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVR 300 P SY +++ + ++ + R V + EL + Sbjct: 582 PSASSWG--SYADELKQYYFVDGFSDLIKEWNELRGRAVQKAVEDVLFEEFRKELQEKLL 639 Query: 301 ERAEDEAINVFARNLHDLLMAA---------------PAGLRATMGLDPGLRTGVKVAVV 345 + + I N+ + A P + V+ Sbjct: 640 RESYEYVIKECCCNVRKRINVASFKIGSENDEDDEMEPYQRIMSFAFVSDRDIASYACVI 699 Query: 346 DATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRET-------ERFY 398 D G++ K + L +AI + R+ E Sbjct: 700 DGHGEI--------------KEIKLIKGLIVSKQPVAIAIS--ASCRQATGVKKDLEGIV 743 Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 ++Q + ++ ++ +S+ A EFP+ L A+S+AR +Q+PL EL Sbjct: 744 NELQSEEDLPPISVELIDPCIPRLFESSKRAKNEFPEYPPLLCHAISLARYMQEPLLELS 803 Query: 459 KI------DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLT 507 ++ + + + Q ++ + L L +C+N +G+DLN LL+ Sbjct: 804 QLLTSDDEEILCLRLHILQAEIPKPDLMEALYIEFINCINDIGIDLNLCLTNERYSSLLS 863 Query: 508 RVAGLTRMMAQN-IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------ 560 V GL A + + N + +NR+ L+ +GP F CAGF++I Sbjct: 864 FVCGLGPRKATALLKLLKKGNLRLRNRKSLVTECGMGPNLFVNCAGFIKIPTNKVDDSDY 923 Query: 561 -NPLDASTVHPEAYPVVERILAATQQ------------ALKDLMGNSSELRNLKASDFTD 607 LD + +HPEAY ++ + D++ +L++L F + Sbjct: 924 AEILDTTRIHPEAYDWARKMAIDALDYDESAEEINQATVVHDIIDQPDKLKDLDLDAFAE 983 Query: 608 E----KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 E FG T+ DI +EL ++ R F + + ET L G ++ Sbjct: 984 ELKRQGFGNKSVTLYDIREELTHRYKECRQPFDSLSPGEVFYLLVDETPESLCYGQLITC 1043 Query: 657 AVTNVTNF---------------------------------------------------G 665 V + + G Sbjct: 1044 RVIGIVHRRPTKDQIDRVNPERDPISNTWTCPLCLFDSFKELSEVWRHIDNNECKGIAIG 1103 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 V + G + ++S+K + P VK G ++ +++++++ + + L+ + + Sbjct: 1104 VKVILDSGITGFISTKNISDKQIRTPEERVKIGMVIHCRIIKLNIDKLSVDLSCKSSD 1161 >UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B1A Length = 349 Score = 291 bits (744), Expect = 9e-77, Method: Composition-based stats. Identities = 167/278 (60%), Positives = 209/278 (75%), Gaps = 5/278 (1%) Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + N L S VVSGK++EG KF DYFD+ E + +PSHRALA+FRGRNEGVL L L + Sbjct: 2 NQMQNNGILSSQVVSGKQQEGKKFSDYFDYAEAIGKIPSHRALALFRGRNEGVLNLHLGS 61 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 EP S CE II G+ AD+W V W WRIK+ + LE EL+ +RE Sbjct: 62 GEAEGEP---SICESIIAASQGIAQQGRAADAWLTETVRWAWRIKLSLKLELELLAQLRE 118 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RAE+EAI VFA NLHDLL+AAPAG +AT+GLDPGLRTGVKVA++D TGK+VATDTIYPH Sbjct: 119 RAEEEAIRVFASNLHDLLLAAPAGPKATIGLDPGLRTGVKVAMIDTTGKVVATDTIYPHA 178 Query: 362 G--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q ++ T+AA+ ++++ ELVAIGNGTASRET++ ++ K+ P++ QK++VSEAG Sbjct: 179 PKKQWDRSIATLAAMAKQYSAELVAIGNGTASRETDKLTAELIKKHPELKLQKLMVSEAG 238 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL 457 ASVYSASELA++E P+LDVSLRGAVSIARRLQDPLAEL Sbjct: 239 ASVYSASELASKEMPELDVSLRGAVSIARRLQDPLAEL 276 >UniRef50_UPI00019085B8 probable transcriptional accessory protein (RNA binding S1 domain) n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019085B8 Length = 274 Score = 290 bits (742), Expect = 2e-76, Method: Composition-based stats. Identities = 134/245 (54%), Positives = 168/245 (68%), Gaps = 2/245 (0%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 I+ EI ARP+Q AA+ LLDEG TVPFIARYRKE+TGGLDDTQLR+L RL YLRE Sbjct: 8 LAARISAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRDLAERLVYLRE 67 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LE RR I++SI+ QGK+TD+L + +K ELEDLYLPYKPKRRTR +IA E GL P Sbjct: 68 LEARRDTIVESITAQGKMTDELMTKVAGAATKAELEDLYLPYKPKRRTRAEIARERGLGP 127 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ + ++ P V A ++ AD V D K AL+GAR I+ E AE+A LL ++R ++ Sbjct: 128 LAEAILAERGREPAVLAEGFITAD--VTDVKTALEGARDIIAEGIAENADLLGRLRAHMR 185 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + + L + VV GK+ G KF DYFDH E +T P HRALAM RG NE VL L++ AD + Sbjct: 186 QASLLKARVVDGKQAAGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIEADAET 245 Query: 246 DEPPK 250 P K Sbjct: 246 LSPNK 250 >UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma mansoni RepID=C4QPS3_SCHMA Length = 1408 Score = 289 bits (741), Expect = 2e-76, Method: Composition-based stats. Identities = 137/791 (17%), Positives = 265/791 (33%), Gaps = 169/791 (21%) Query: 111 RRTRGQ----IAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD----------------- 149 R+ R +A AGL L S E QY+ D Sbjct: 394 RQARATASYEVAKRAGLGDLVQRFGLSASQFAENVQDQYLRHDVDQCPMLPIDAAGDFLS 453 Query: 150 KGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL----VSTVVSGKEEEGAKF 205 +++ AL ARY+L + + + +R A + +E F Sbjct: 454 PQFPNSELALSAARYMLAFEISREPLVRKMMRQMFNLQAVISMRPTERGAKHIDESHPLF 513 Query: 206 RDYFDHHEPLSTVPSHR-ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL 264 + + ++P++ + + L + + ++Q ++ + Q Sbjct: 514 QIKYLSNKPVTDLMGNVLFLHIHNAERDKLVQYEIHVPTEQIRGLSLVDELQRFFYQDEF 573 Query: 265 RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 + R V+ + L EL + ++ + + A+ L + L P Sbjct: 574 SSLVQAWNEQRNLVLKQAAEEFIFPGLVRELRQKLLNESQQAVLRMCAKKLFNYLRIGPY 633 Query: 325 -----------------------GLRATMGL-----DPGLRTGVKVAVVDATGKLVATDT 356 + L D ++ V +D G++V Sbjct: 634 PPDGHHFHTSGDIDSRSSGAVWPKGARVLSLALKNEDDSRKSMVTAVQLDCNGEVVDFLH 693 Query: 357 IY--------PHTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRET-------ERFYL 399 + P + K ++ KH ++ IG R+ + Sbjct: 694 FHGLLVSRRAPEDMKKLKEEDMQRLSTFMVKHKPQVCVIG--CDCRKALFLQEDIQNLVN 751 Query: 400 DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP-DLDVSLRGAVSIARRLQDPLAE-- 456 ++ + + ++ + V++ S A+ + P + LR A+S+ RRLQDPL E Sbjct: 752 ELANERRLLRIHVELMETELSIVFALSSRASFDLPISYPLLLRQAISLGRRLQDPLFEFA 811 Query: 457 -LVKIDPKSIGV--GQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTR 508 LV I+ + +G+ Q + + L R L+ + VN VGVD+N + ++ Sbjct: 812 QLVTIENEILGIRWHPLQDSLPRDMLLRALEIEFINRVNEVGVDVNRCLSHPHTAGVIQF 871 Query: 509 VAGLTRMMA-QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------- 560 ++GL + + + NR QL+ + GP+ CAGF++I+ Sbjct: 872 ISGLGPRKGLHMLKILKHKKTHLTNRMQLVTMIEFGPRVVINCAGFIKIDTSSVRDLDAD 931 Query: 561 --NPLDASTVHPEAYPVVERILAATQQ-----------ALKDLMGNSSELRNLKASDFTD 607 + LD++ VHPE+Y + +++ + AL++++ + + LR L F + Sbjct: 932 DVDLLDSTRVHPESYDLAKKMAVDALEYDDTEECDPTVALEEIVHSPARLRELDLDAFAE 991 Query: 608 E------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 E T+ DI KEL RD R +++A ET L G ++E Sbjct: 992 ELKRQEHGDKHITLYDIRKELNNRYRDYREAYQSANPESIFSMVTHETPETLHVGRLVEC 1051 Query: 657 AVTNV---------------------------------------------------TNFG 665 V +V G Sbjct: 1052 RVLSVATRRPRPEQLDNANPTKNEINGLWMCPFCQQDNFQLLNHVWSHFDNNECPGQPVG 1111 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 V + DG + + + + + G +V+ +V ++D+ R + LT + E Sbjct: 1112 LRVQLDNGIDGFIPLKFM--DSPDKLFERTQPGSLVQCRVTKIDITRFNVELTCKSAELK 1169 Query: 726 GETNARRGGGN 736 E + R + Sbjct: 1170 DERHIWRPRQD 1180 >UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersinia pestis D182038 RepID=D0JXD7_YERP1 Length = 264 Score = 283 bits (724), Expect = 2e-74, Method: Composition-based stats. Identities = 160/201 (79%), Positives = 171/201 (85%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ RIIA E+QARPEQV +A+RLLDEGNTVPFI+RYRKE+TGGLDD QLR LE+RL Sbjct: 1 MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLG 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLRELE+RRQ ILKSI +QGKLTD LA AINATLSKTELEDLYLPYKPKRRTRGQIAIEA Sbjct: 61 YLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+ LW DP PE A YV ADKGVADTKAALDGARYILMERFAEDA LLAKVR Sbjct: 121 GLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDGARYILMERFAEDATLLAKVR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEG 202 YLWKNAHLVS VV K + Sbjct: 181 QYLWKNAHLVSKVVEVKSRKA 201 >UniRef50_Q4RRW0 Chromosome 7 SCAF15001, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RRW0_TETNG Length = 1671 Score = 281 bits (719), Expect = 8e-74, Method: Composition-based stats. Identities = 154/1006 (15%), Positives = 293/1006 (29%), Gaps = 307/1006 (30%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYL 63 S I + Q L + VPFIA YRKE L+ L + Sbjct: 216 STIAKIKEALNFMRNQ------LFE----VPFIAFYRKEYVEPELNINDLWKVWQWDEKW 265 Query: 64 RELEERRQAILKSIS-------EQGKLTDD---------LAKAINATLSKTEL-ED---- 102 +L+ R+Q + + EQ D L A +++ E+ ED Sbjct: 266 TQLKTRKQNLTRLFQKMQSYQFEQISADPDKPLADGIRPLDTADMESVTVKEVSEDGKMR 325 Query: 103 ---LYLPYKP--------------------------------KRRTRGQIAIEAGLEPLA 127 + +K RR I GL+ LA Sbjct: 326 DEWMEWSFKSDSVCLMSVYSLGEEEELEIEEEEQKGPDLKLASRRDMYSICQSVGLDGLA 385 Query: 128 DLLWSDPSHTPEVAAAQYVYADKG-----------------VADTKAALDGARYILMERF 170 P E Y + + +A L+G RY++ + Sbjct: 386 KKFGLTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQI 445 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK----FRDYFDHHEPLSTVPSHRALAM 226 A + + +R + A + ++E + + + ++P+ + + L M Sbjct: 446 AREPLVRHVLRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELTGEQFLKM 505 Query: 227 FRGRNEGVLQLSLNAD--PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK--GVVSWT 282 +EG+L + + D ++Y ++I + ++ + R+ + Sbjct: 506 CLAEDEGLLSIDICIDLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERA 565 Query: 283 WRIKVLMHLETELMGTVRERAEDEAINV---------------------------FARNL 315 + + EL + A++ + V R L Sbjct: 566 LTQFLYPQMAKELKSKLIAEAKESIVRVSCLLQHTMWIFKKFKNKTLFFSASSQSCCRRL 625 Query: 316 HDLLMAAPAGLR------------------ATMGLD--PGLRTGVKVAVVDATGKLVATD 355 ++ L AP +G+ P T V A+++ G++V Sbjct: 626 YNWLKVAPYRPDHLAEEDDDLMDESQGKGIRVLGVAYAPSRDTPVFCALINGEGEVVDFL 685 Query: 356 TIYPHTGQAAKA--------------------------------------AMTVAALCEK 377 + P+ + A + Sbjct: 686 RL-PYFMKRRNAFREEEREKKVRKQSRQGVAGHYSELTALESVCLLQALDIENLKKFLSS 744 Query: 378 HNVELVAIGNGTASRETERFYLDVQKQFPKVT-------AQKVIVSEAGASVYSASELAA 430 ++A+ +R+ + D+++ ++ +V A++Y S+ + Sbjct: 745 KKPHVIAVAG--ENRDAQMIMEDMKRAISELEQESALPAVGVELVDNELATLYMNSKKSE 802 Query: 431 QEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDA 485 +F D LR AVS+AR++QDPL E ++ D + + Q V + L L Sbjct: 803 ADFRDYPPLLRQAVSVARKIQDPLMEYAQVCSTDEDILCLKLHPLQEHVVKEDLLSALYC 862 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 + VN VGVD+N A Sbjct: 863 EFINRVNEVGVDVNKAIAHP---------------------------------------- 882 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERIL------------AATQQALKDLMGN 593 + + LD S VHPE Y ++ A AL++++ N Sbjct: 883 ---HTQSLVHTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILEN 939 Query: 594 SSELRNLKASDFTDE----KFGVP--TVTDIIKELEKPGRDPRPEFKTAQFADGV----- 642 L++L F +E +G T+ DI EL +D R ++ + Sbjct: 940 PERLKDLDLDAFAEELERQCYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNMVTK 999 Query: 643 ETMNDLQPGMILEGAVTNVTNF-------------------------------------- 664 ET G ++ VT + + Sbjct: 1000 ETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNH 1059 Query: 665 -----------GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 G + G + LS+K V+ P VK G V +++++D+++ Sbjct: 1060 FDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKF 1119 Query: 714 RIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNS 759 + LT R + + N + + + + + E Sbjct: 1120 SVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQDEELKKKQQ 1165 >UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Agaricales RepID=B0CSK5_LACBS Length = 1406 Score = 278 bits (712), Expect = 5e-73, Method: Composition-based stats. Identities = 160/861 (18%), Positives = 297/861 (34%), Gaps = 161/861 (18%) Query: 27 LLDEGNTVPFIARYRKEITGGLDDTQLRN------------LETRLSYLRELEERRQAIL 74 L E VP+I ++++ D +++R + + R L ERR+A+ Sbjct: 333 LFVEEYEVPYIWVHKRDYICHFDASEMRTRFELLSLNELWRIHSLGQKYRSLVERRRALS 392 Query: 75 KSISEQGKLTDDLAKAINATLSKTEL-----EDLYLPYKPKRRTRG-------------- 115 S D + I + E+ E L + YK K+ + Sbjct: 393 ASYERLQVKDDYYEEEIQPQIDGVEVVTDATEWLAMKYKDKKLSSAVEFRFHDDDEPDTT 452 Query: 116 ---------------------QIAIEAGLEP---LADLLWSDPSHTPEVAAAQYVYADKG 151 ++A G+EP + + + S H E + + Sbjct: 453 KKRKMPSRISAYEVVKRSIVSKLAQGFGIEPHHVVLNFMASHHVHFVEDQELNPIVFAEQ 512 Query: 152 VADT--------KAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVS---GKEE 200 AD + L AR IL +D L +++R + A + K + Sbjct: 513 FADPDPSKAQAPEDILVRARMILSTEIGKDPLLRSQIRKIFKEEAQISVEPTERGITKID 572 Query: 201 EGAKFRDY-FDHHEPLSTVP-SHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQII 258 + + ++ + H + + + S + L + E ++ +S++ + E Sbjct: 573 DNHPYYNFKYLHRKSIKDMQDSAQFLLILAAEAEHLVNVSISIPNAAISSFERRLNEAFA 632 Query: 259 MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDL 318 D+ + + R VV + ++ +RE ED + L Sbjct: 633 SDNFSDSAKSWNVE--RSRVVQEVMELHLIPAGIKWTREYLREEVEDYLAAQCSNRLRAR 690 Query: 319 LMAAPAGLR---------ATMGL-----DPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 + AP +R + + + DP + + + +D G++ I Sbjct: 691 VDVAPYLVRELKDGEIACSVLAISWGKGDP-HKDAITLVFMDEAGRMREYTKI--DNLHD 747 Query: 365 AKAAMTVAALCEKHNVELVAIGN-----------------GTASRETERFYLDVQKQFPK 407 + ++ +LV +G GT + E + + Sbjct: 748 TEMIDEFLDFVKRRKPDLVVMGGFSMSTMKLTRLVKTTLHGTGPSQGETGWGNPSANEQV 807 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSI 465 + V + A +Y S AA EF L + + V +AR Q PL E + D +I Sbjct: 808 FDIPVIYVFDDVARIYQHSRRAADEFGALSPTAKYCVGLARYTQSPLNEFAALGSDITAI 867 Query: 466 GVGQ-YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMMAQN 519 + + QH V + +L + V+ D N GVD+N A LL V GL AQ Sbjct: 868 TLSEDDQHLVPKEKLLSAFERVLVDVTNKTGVDINRAVADAYYQNLLPFVCGLGPRKAQV 927 Query: 520 IVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG---------------DNPL 563 ++ G NR Q ++ L K F AGFLRI +PL Sbjct: 928 LIKKIGSLGGNLVNRDQFIEGGLLTTKIFLNAAGFLRIAQEHDPKPTKHRHDGETAPDPL 987 Query: 564 DASTVHPEAYPVVERILAATQQALKDLM----------------GNSSELRNLKASDF-- 605 D + +HPE Y + ++ + ++ + N +L L +F Sbjct: 988 DDTRIHPEDYELARKMATDALELDEEDIHDEHPSHVVNLIMTDPDNERKLSELNLDEFAI 1047 Query: 606 ----TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 + T+ I EL +P + R +F + + ET L+ G+I+ Sbjct: 1048 SLYEANHDQKRHTLNVIRDELLRPFAEQRNKFVLPSDWEILTMLSGETPRTLEVGLIVTT 1107 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL--EVDLQRKR 714 V +T V + +G++ LS+ + P +VK G + ++ + D+++ Sbjct: 1108 QVQRLTKSFINVRLDSGIEGVIATQYLSDSG-DLPDNLVKKGQTIPGVIVERKFDMEQDS 1166 Query: 715 --IALTMRLDE-QPGETNARR 732 + L+ R +E G+ RR Sbjct: 1167 FFVELSSRQEELSKGDEQYRR 1187 >UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYQ2_PYRTR Length = 1416 Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats. Identities = 170/906 (18%), Positives = 314/906 (34%), Gaps = 176/906 (19%) Query: 18 PEQVDAAVRLLD-EGNTVPFIARYRKE-ITGG-----------------------LDDTQ 52 + V + ++ E VPFI +RK+ + L+ Sbjct: 318 EKAVRKVLEFINIEDYEVPFIFNHRKDYLIHAPSDHDDYDDIDNPPPMDARPERLLNQAD 377 Query: 53 LRNLETRLSYLRELEERRQAI------LKSISEQGKLTD-DLAKAINATLSKTELEDL-- 103 L + R E+R A+ LK++ + +TD ++ + N + E+++L Sbjct: 378 LWEVFDLDLKFRAFAEKRDALRQNYENLKAVYSE--ITDTEIEELSNRAATIEEIQELQD 435 Query: 104 YLPYK---------------PKRRTRG-------------QIAIEAGLEP--LADLLWSD 133 YL YK KR Q+ G+ P A + Sbjct: 436 YLHYKYSQELNEVRQELNGTQKRANNARNFFDKLRSGKALQLVKAIGITPDDFAKKVDGT 495 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALDGA------RYILMERFAEDAALLAKVRDYLWKN 187 + + Y + +A GA R + ++ + L +R ++N Sbjct: 496 NTGAHTIEDPPYKVEELADQLAEAPETGATLLRSTRLLFVQDLQMCSRLRRYLRASFYQN 555 Query: 188 AHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTVP--SHRALAMFRGRNEGVLQLSLNA 241 A + E+ + + + L M + +EG++Q+ + Sbjct: 556 AEIDCLRTDKGMRTITEDNPYYEFKYLRRVTFGDLQGRPDLFLKMLKAESEGLMQVRITM 615 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 K ++I+ + G+ + ++ RK ++ K+ + + T+R Sbjct: 616 GN--YPNFKSRLHKEIVSE--GVSDVSDTWNALRKELLDTALD-KLQGVIANGVKETLRA 670 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRAT-MGLDP---------GLR-TGVKVAVVDATGK 350 R EDE N ++ L AP L+ +G P G+R + A V+ G+ Sbjct: 671 RCEDELAASARENYYNKLDQAPYKLKTAPLGSVPNVLCLSNGSGMRGDAIMWAYVENDGR 730 Query: 351 LVATD-TIYPHTGQAAK------AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK 403 ++ I G + + + ++ +++ + S ET + Y D+Q+ Sbjct: 731 VLEHGRLIDMRLGNPERNIPEGQDVEKLVDVIQRRRPDVIGVSGF--SVETRKLYKDIQE 788 Query: 404 ------------------QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVS 445 + + ++V++ A +Y S A EFP R ++ Sbjct: 789 IINQRGLTGPAYEDEDTGEERNEPLEIILVNDEVARLYHTSARAIAEFPKHPALTRYCIA 848 Query: 446 IARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL----- 498 + R LQ+PLAE + D SI Q + Q +L +L+ + D VN VG+DL Sbjct: 849 LGRYLQNPLAEYASLGKDIVSIPFIPNQTLIPQDKLLDRLETAMVDMVNLVGIDLPETYD 908 Query: 499 NTASVPLLTRVAGLTRMMAQNIVAWRDENG-QFQNRQQLLKVSR-------LGPKAFEQC 550 + L+ V GL A ++ N + +R LL VS +GPK F+ C Sbjct: 909 DKYLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAMGPKVFQNC 968 Query: 551 AGFLRIN-----HGDNPLDASTVHPEAYPVVERILAATQQALKDLMG------------- 592 A FL I + LD + VHPE Y + +++A ++ + Sbjct: 969 ASFLYIPYDATEESSDYLDYTRVHPEDYDLARKMVADALNMDEEDVKAETDEGGPSAVVR 1028 Query: 593 ------NSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 + + +L D+ E + T+ I EL+ P + R F + Sbjct: 1029 KMVREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAELDNPYEEIRQMFAMLSGDE 1088 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAF-----VDIGVHQDGLVHISSLSNKF---VEDPH 692 + + EG V VT F V + + V S ++P Sbjct: 1089 LFTMLTGETKDSLYEGMVVPVTIRRTFPDHIEVKLECGIEAGVSESEFPEGVGGGGQEPR 1148 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMRLD--EQPGETNARRGGGNERPQNNRPAAKPRG 750 V IV+ ++L ++ + L++R D QP + R G K Sbjct: 1149 HVFSTHQIVRARILYLNRKALTAQLSLRGDLIRQPEKKRFERAAGEWDEAQEAQDKKAAE 1208 Query: 751 REAQPA 756 +E + A Sbjct: 1209 KEKEVA 1214 >UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureus RepID=P95845_STAAU Length = 239 Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 1/240 (0%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ I + Q +Q++A + LL+E NTVPFIARYRKE TGGLD+ Q++ ++ Sbjct: 1 MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQTGGLDEVQIKQIDDEYQ 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y+ L++R++ ++K+I +QG LT++L K I +EDLY P+K K++TR A Sbjct: 61 YMVNLQKRKEEVIKNIEQQGLLTEELKKDILKQNKLQRVEDLYRPFKQKKKTRATEAKRK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA H + + ++ V + A+ GA+ I+ E+ +++ K+ Sbjct: 121 GLEPLAIW-MKARKHEVSIEEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKIL 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 ++ L ++ E+E F Y+ + EP+ + +HR LA+ RG E VL Sbjct: 180 KDMYHQGVLTTSKKKNAEDEKGIFEMYYAYSEPIKRIANHRVLAVNRGEKEKVLSAKFEF 239 >UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Filobasidiella neoformans RepID=SPT6_CRYNE Length = 1506 Score = 266 bits (680), Expect = 3e-69, Method: Composition-based stats. Identities = 124/694 (17%), Positives = 249/694 (35%), Gaps = 111/694 (15%) Query: 133 DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 +P P A ++ A + + AL A ++L++ ++D A+ + RD++ + Sbjct: 519 NPDKMPLELADEFTGA--AYSSPEQALSAASFVLVQELSKDPAIRQQARDFMDTCGLVTV 576 Query: 193 TVVSGKEEEGAKFRDYFDH----HEPLSTVP-SHRALAMFRGRNEGVLQLSLNADPQFDE 247 ++ Y++ ++P+ S + + M + EG++ ++ + Sbjct: 577 NATDRGMSVIDQYHLYYNFKFLTNKPVLDFRDSPQFVHMLKAEEEGLINIAFDIREDMLA 636 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 ++ + G + + R V + + ++ + +R +AE+ Sbjct: 637 SFTDALIRCCRSNDYGEIAS--AWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQAEEYI 694 Query: 308 INVFARNLHDLLMAAPA--------GLRATMGLDPG---LRTGVKVAVVDATGKLVATDT 356 L + P + + + G +R V ++D G + T T Sbjct: 695 AERCREELELRVNVRPYASSGMEQGETPSVLAITNGKGDIRDAVMAVMLDDEGNV-RTQT 753 Query: 357 IYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERF-----------YLDVQKQF 405 + + L EK ++V IG +A +T R +++ Q Sbjct: 754 KFDNLRDEED-KTMFIELLEKRKPKVVVIGGFSA--QTARLKDAALVAIRQHAIELLGQN 810 Query: 406 PKVT------------------------AQKVIVSEAGASVYSASELAAQEFPDLDVSLR 441 P V+ + V++A A +Y +SE A +E P+L ++ R Sbjct: 811 PPVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSSEEAEKEHPNLPLNGR 870 Query: 442 GAVSIARRLQDPLAELVKIDPKSIGVG---QYQHDVSQTQLARKLDAVVEDCVNAVGVDL 498 A+ +AR Q+PL K+ V +Q + Q +L L+ + + V +G+++ Sbjct: 871 YALGLARYAQNPLNAYCKLGKHIASVTFMEHHQKLIPQEKLLYHLERGLVNSVCFMGIEI 930 Query: 499 NTASV-----PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGF 553 N+ +L +AGL A ++ ++G NR + GP FE AGF Sbjct: 931 NSCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMAFTDLGLFGPTIFENTAGF 990 Query: 554 LRI--------------NHGDNPLDASTVHPEAYPVVERILAAT---------------- 583 L I +PLD + +HPE Y +++ Sbjct: 991 LTIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMCQDALDLDVEDVADRHKSEV 1050 Query: 584 --QQALKDLMGNSSELRNLKASDFTDEKFGV----PTVTDIIKELEKPGRDPRPEFKTAQ 637 L D G NL F ++ G T+ +I+ EL + D RP F Sbjct: 1051 VQTLMLDDKRGKKLGELNLDDFAFNLQRQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPT 1110 Query: 638 FADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK---FVE 689 + V ET + G+ + V + F + D ++ ++++ V Sbjct: 1111 DWEIVTMVTGETERTVGRGLKVTATVRKAISARVFCQLESGLDAVLERDYVADEDQAPVT 1170 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 V K +K V+ + R ++ ++ R + Sbjct: 1171 SCDEVFKPRQAIKGVVIMPEPARFQVRISTRPSD 1204 >UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 Tax=Thalassiosira pseudonana RepID=B8C8T3_THAPS Length = 1304 Score = 264 bits (675), Expect = 1e-68, Method: Composition-based stats. Identities = 138/685 (20%), Positives = 240/685 (35%), Gaps = 104/685 (15%) Query: 157 AALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHE-PL 215 L G RY+ A + + +RD A + + + + F +Y+ H Sbjct: 349 DPLRGCRYVAAMELAHEPRIRRHLRDIYRAEACITTRPTAKGLQNIDAFHEYYGLHLLRN 408 Query: 216 STVPSH------RALAMFRGRNEGVLQLSLNADPQFDEPPKES--YCEQIIMDHLGLRLN 267 V H + L + + G + + ++ DE + E + ++ + Sbjct: 409 KHVKDHFPTACIQYLNLLKAERSGDITVQVHLPFVNDEMDTGTPWLMEALERVYMPANGD 468 Query: 268 NAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR 327 + R+ ++ +L H E E +R+ + + A+NL L M P Sbjct: 469 TEEWNDERRKILKMALVNYLLPHFEAETRRDLRDASTRIGVEAAAQNLQALAMEGPYRPS 528 Query: 328 ATMGL-------------------DPGLRTGVKVAVVDATGKLVATDTIYP-HTGQAAKA 367 +G DP + G +A +D G+ I + + A Sbjct: 529 YMLGENRFIVPTDDFPIVGVCSATDP--KDGTFLAAIDENGESQDHLAIPGGTSITSDNA 586 Query: 368 AMTVAALCEKHNVELVAIGNGTASRETERFYLD----VQKQFPKVTAQKVIVSEAGASVY 423 V + LV + + + F + IV + A ++ Sbjct: 587 REKVITFLMQTRPSLVVVDDEDFEARMDSFRMMHPNVDDDDDVVWKCNVDIVDDNVAQLF 646 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV--------- 474 S +EFPD V+L+ A++ AR ++PL EL + G + ++ Sbjct: 647 GRSVRGKKEFPDQPVNLKVAIATARWAKNPLCELAYTWSTASDAGVFGTEMLFMNIHPLQ 706 Query: 475 ---SQTQLARKLDAVVEDCVNAVGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWRDE 526 + L R+ + V+ + VGVD+N A +L+ V GL A N+ Sbjct: 707 RLLPKPLLLRQYERVLCNVTAEVGVDINGACTYDHMHGMLSFVPGLGPRKANNLKQSVAR 766 Query: 527 -NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN-------PLDASTVHPEAY---PV 575 G +R+ LL LGP + FLR+ D PLD + HP+ Y Sbjct: 767 IGGVVSSRKSLLAKRLLGPIIYNNAIAFLRVRSTDQLQDQMLHPLDDTRCHPDVYLRQKW 826 Query: 576 VERILAATQQ---------------ALKDLMGNS-SELRNLKASDFTD--EKFG----VP 613 +I + AL+D+M NS E+ L F + E+ G + Sbjct: 827 AVKIAVDALELGDSASNDTDDYAISALRDVMQNSREEVEELDLDTFAEMIEQNGNGKWLS 886 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFV 668 +T + E P DPR + ET L PG + G V +FG+ V Sbjct: 887 HLTMVKWEFRLPFEDPRKPMEPPTHEKLFKLLTGETDATLCPGKEVTGKVVKNGDFGSQV 946 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 + G + + +L++ V G IV + EV + LT++L++ Sbjct: 947 KLEGDVPGFIPLRNLADDHV---------GQIVNAIITEVKMDHMCCDLTLKLED----- 992 Query: 729 NARRGGGNERPQNNRPAAKPRGREA 753 ++ RP + P REA Sbjct: 993 FKKKSSEWGRPASLPPLDNSFDREA 1017 >UniRef50_UPI00017F7950 YALI0B01224p n=1 Tax=Yarrowia lipolytica RepID=UPI00017F7950 Length = 1406 Score = 252 bits (644), Expect = 4e-65, Method: Composition-based stats. Identities = 120/674 (17%), Positives = 226/674 (33%), Gaps = 71/674 (10%) Query: 132 SDPSHTPEVAAAQYVYADKGV-ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL 190 D + P A Y+ V +D +AL+ A + A D + VR + A + Sbjct: 521 EDNARAPADLATDYLNDSSLVLSDAASALESATQMFAMELAFDPRVRRYVRQQFAQLAKI 580 Query: 191 ----VSTVVSGKEEEGAKFRDYFDHHEPLSTVP--SHRALAMFRGRNEGVLQLSLNADPQ 244 S +E + + + + L M + +G++ + ++ P Sbjct: 581 DVYATEAGSSQIDEAHPAYEFKYSRNLSFEELRKSPKLYLQMLQAEAKGLVNVRVSY-PD 639 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 F + ++ D + + R+ VV + ++ + + +R E Sbjct: 640 FKTKFIDLLLSKLQSDGVSDIASQWNTQ--RRAVVRIAMKT-LVPMVTRSIKEELRNDCE 696 Query: 305 DEAINVFARNLHDLLMAAPAGLR--------ATMGLDPG----LRTGVKVAVVDATGKLV 352 + R L AP R + L G R V VD G++ Sbjct: 697 RQLFFELRRMFGRKLNQAPFKPRNYEKGTVPRVLALSAGQADFRRDAVVGVFVDEEGRVA 756 Query: 353 ATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE-----TERFYLDVQKQFPK 407 + Q + ++ + ++ +L+A T E + Sbjct: 757 ERAKLG--APQTQEFTNALSEMVKRRTPDLIAFSGQTVQSHRLKSVIEEVVRTQGLEAEG 814 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSI 465 + V + A ++ S A EF D R V++AR +Q PL E + + + K+I Sbjct: 815 EPLEVRWVQDEVACLFRNSAGALVEFADSPPLERYCVALARYVQSPLLEYLSLGKEIKAI 874 Query: 466 GVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNI 520 + +Q +S+ + +D+ D VN VGVD+N A +L +AGL A + Sbjct: 875 PMVDFQSLISEDRFYEAVDSTFVDYVNLVGVDINEAIRDAYVARMLPYIAGLGPRKASGL 934 Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD--------NPLDASTVHPEA 572 G R L+ G F A FLR+ + LDA+ +H E Sbjct: 935 THKIQSRGYLGTRLDLITEKLCGKNVFMNVASFLRLPYDKRSVRHEETELLDATRIHIED 994 Query: 573 YPVVERIL--------------AATQQALKDLMGNSSELRNLKA----SDFTDEKFGVP- 613 Y + +++ + + LM +E N ++ ++K G Sbjct: 995 YELAKKMAADALELDEEDLLEFESEGGVIAQLMKEGAEKLNELILEGYAEELEQKLGKKK 1054 Query: 614 --TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGA 666 T+ I +EL + R + ET L PG ++ + +++ Sbjct: 1055 RYTLEMIRRELINHYEELREPLHVLTDLEVFTMLTGETEKSLHPGSVVAVQIRRISDRYL 1114 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPG 726 V + G V ++++ P + ++ V+EV L+ + Sbjct: 1115 AVRLSCGIQGNVTQDRITDQRGVHPSALFHHQQTIRAVVMEVSYSNFSAELSCLHRDISD 1174 Query: 727 ETNARRGGGNERPQ 740 R R Q Sbjct: 1175 AQKRARQVKRPRDQ 1188 >UniRef50_A8PWC4 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PWC4_MALGO Length = 1544 Score = 243 bits (621), Expect = 2e-62, Method: Composition-based stats. Identities = 141/740 (19%), Positives = 260/740 (35%), Gaps = 126/740 (17%) Query: 107 YKPKRRT-RGQIAIEAGLEP--LA--------DLLWSDPSHTPEVAAAQYVYADKGVADT 155 Y ++ T Q+A GL LA + D P A +++ A G Sbjct: 486 YDQRKHTPMAQLAARLGLTSTQLAANVAGGIKQFVPDDDESAPLTVADEFIGAAPGATTA 545 Query: 156 KAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHH--- 212 +AAL AR +L ++ AL +VR +A L + Y++ Sbjct: 546 EAALALARTLLAHEIGKEPALRREVRTLFRTSALLDVEPTERGMTRIDEAHPYYNFKFLR 605 Query: 213 -EPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNA 269 +P+ + + + L + E ++ ++L ++ +Q + D + R + Sbjct: 606 AKPVHAILQNASQLLQIVHAEEERLVHVTLRLPTDTANKLEQRLQDQFVSDGVSAR--SQ 663 Query: 270 PADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRAT 329 + R+ V+ +L + E + + + L + P Sbjct: 664 AWNDERRAVIEEVCASFLLPLGRAWTREWLLEECREALLRQCEQKLTQRVEGGPVQSAGM 723 Query: 330 MGL--DPGLRTGV-------------------KVAVV--DATGKLVA---TDTIYPHTGQ 363 + DP V KV + D G L+ DT+ P G Sbjct: 724 LSRQGDPEWDEQVSHVPRVLAVSHGSGDPRTSKVVAICLDEDGHLIERVTYDTLRPLRGA 783 Query: 364 AAKA----------AMTVAALCEKHNVELVAIGNGTA-SRETERFYLDVQKQFPKVTAQK 412 A +A L + + +++ + +A ++E + D+ + ++ Sbjct: 784 AVEAGDDSDVQEDPRAEFTKLVRRRHPDVIVVNGFSAHAQELKAIVQDLVSSAYEERVRE 843 Query: 413 ---------------VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL 457 V V + A +Y S AA+EFP+L V R V +AR Q P+ E Sbjct: 844 EGLEGIAAEHARMDVVSVYDDVARLYQHSARAAEEFPELSVLARYCVGLARYAQSPVNEF 903 Query: 458 VKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL-----NTASVPLLTRVA 510 + D ++ Q + +L L+ + VN +G+DL NT +L +A Sbjct: 904 AALGADLTAVQFDPAQRLLPTERLRVCLERAIVMLVNDIGLDLQIALTNTYVQHMLPFIA 963 Query: 511 GLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRI-----------N 557 GL AQ ++ G NR+ L++ L + FLRI + Sbjct: 964 GLGPRKAQALLNAIRTRLDGIVVNREVLVRRGLLSFVVWNNAISFLRIDQDAAADALDDD 1023 Query: 558 HGDNPLDASTVHPEAYPVVERILA-ATQQALKDLMGN---------------SSELRNLK 601 + LD + +HPE Y ++ A + +DL G S +L L Sbjct: 1024 AQPDVLDTTRIHPEDYDFPRQMARDALNKHEEDLEGEHPSLACAEIMEDARPSEKLAALD 1083 Query: 602 ASDFTD---EKFGV---PTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQP 650 ++ E+ G+ T+ +EL +P D RP + ET L Sbjct: 1084 LDNYATMLWERRGLRKRLTLLTCKQELIRPYDDWRPPQLLPTTEELFMMFTGETRRSLSE 1143 Query: 651 GMILEGAVTNVTNFG-----AFVDIGVHQDGLVHISSLSNKFVE---DPHTVVKAGDIVK 702 G ++ VT + V + DG++ + + + ++G + Sbjct: 1144 GYVVPVIVTRIEEGRDIEGVLRVRLEAGIDGVITGRDIMPGYNSRDVRLRRLFRSGQALN 1203 Query: 703 VKVLEVDLQRKRIALTMRLD 722 ++++DLQR R L++R + Sbjct: 1204 AVIVQLDLQRMRAELSLRAE 1223 >UniRef50_C4R7H2 Transcription elongation factor n=1 Tax=Pichia pastoris GS115 RepID=C4R7H2_PICPG Length = 1500 Score = 242 bits (617), Expect = 5e-62, Method: Composition-based stats. Identities = 111/684 (16%), Positives = 235/684 (34%), Gaps = 101/684 (14%) Query: 132 SDPSHTPEVAAAQYVYADK---GVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA 188 DP +P A + +K ++ A + E+ + + + +R Sbjct: 556 EDPIESPMDMIADIMSTEKDKTTFISSEKAYQAVKQFFSEQLSYEPFIRKTIRTAFQSFG 615 Query: 189 HLVSTVVSGKEEEGAKFRDYFDH----HEPLSTVP--SHRALAMFRGRNEGVLQLSLNAD 242 + + + + YFD + P+S + L M + N+G++ + + Sbjct: 616 VINIELTERGKLQIEPESPYFDFKYAKNRPISALTATPDLYLRMIQAENDGLVNIKVELP 675 Query: 243 P-QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 + + + + N D+W++ + V ++++ + Sbjct: 676 MLSTVVDHFYNILKSDGTSEISEKWNALRNDAWKQSL--DKLIPLVQLNVKESIRRDCER 733 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLR------ATMGLDPGLR-TGVKVAVVDATGKLVAT 354 + N F + + P + T+ G R V +D +G + + Sbjct: 734 VLYFQVKNSFTKKIDQAPYQPPTYAKGTIPRVLTLSFGEGNRGDAVLGVFMDDSGDV-KS 792 Query: 355 DTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT----- 409 + Q+ + ++ + +N+ IG + T++ + V + + Sbjct: 793 QIKFDEDFQSRDFSDSLTRYIKSNNINPDIIGISGFNIHTKKLFDKVNELVNEERLTIEY 852 Query: 410 ------------------AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 + + V++ A +Y S ++ E+P+ + + +A+ +Q Sbjct: 853 DNEYGYDREEDGRSDKHLIRVIYVNDETARLYQHSSKSSAEYPNRPQLAKYCIGLAKYIQ 912 Query: 452 DPLAELVKIDPK--SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVP----- 504 PL E + +D S+ + ++Q+ + + +L + + D VN VGVD+N A Sbjct: 913 SPLLEYLALDESMYSLHIHKHQNLLPREKLIDAVQTSIVDIVNLVGVDINEAVRAPYHAL 972 Query: 505 LLTRVAGLTRMMAQNIVAWRDENGQ-FQNRQQLLKVSRLGPKAFEQCAGFLRI------- 556 L V GL A ++ G NR L+ F A F+ I Sbjct: 973 ALPYVCGLGPRKAAGLIQSIQRIGSNLVNRAHLITEQLTSKTVFLNMASFVYIVFDPDVE 1032 Query: 557 ---NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN-------------- 599 + LD++ +HPE Y + ++ A + S +RN Sbjct: 1033 RNPQGEMDLLDSTRIHPEDYSLARKMAADALDIEDIDDDDESAMRNAIYEMVFPRSPPKD 1092 Query: 600 ----------LKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV- 642 L D+ E T+ I +EL+ R+ R +F A+ Sbjct: 1093 EDDLTFKLDELILDDYATELERKHQLKKRSTLQIIKEELQSRYREIRRDFHILNEAEIFQ 1152 Query: 643 ----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL---SNKFVEDPHTVV 695 ET++ + GM++ V V + V G + + +++ DP V Sbjct: 1153 LLTRETVDSFRKGMVIPVYVRKVESSYMSVSTQSLIAGNIQRQDILEPNDRR--DPREVY 1210 Query: 696 KAGDIVKVKVLEVDLQRKRIALTM 719 G V+ +L+VD + L++ Sbjct: 1211 SVGQTVRACILDVDYYNFKCQLSL 1234 >UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G582_PHATR Length = 1958 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 151/835 (18%), Positives = 270/835 (32%), Gaps = 222/835 (26%) Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFD-- 210 A+ K L G RY+ A + + +R+ +A + + +E F D+F Sbjct: 793 AEAKDPLRGCRYVAAMELAYEPRIRMVLRNLFRMHAVITTKPTKKGIDEIDSFHDFFGLH 852 Query: 211 --HHEPLST----------VPSH-----------------------RALAMFRGRNEGVL 235 ++P+ + + L + + G + Sbjct: 853 LIRNKPVKDHFPLDKVESSIRKADLGEEERRELDLEMQKREYDSCLQYLNILKAEESGDI 912 Query: 236 Q--LSLNADPQFDEPPKES--------------YCEQIIMDHLGLRLNNAPADSWRKGVV 279 + L D+ K ++ +L ++ + R V+ Sbjct: 913 TSHVHLPLLEHLDDWYKIDTDQLLGRDNQDDSPLYNELEKVYLPPDVDTDQWNGERCKVL 972 Query: 280 SWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLD------ 333 + +L E EL +R+ A + + A NL L M P + + + Sbjct: 973 RFALNTFLLPQFEAELRRDLRDAATRIGVKMAAENLRKLAMEGPYRPASILHTENRFLYP 1032 Query: 334 ------------PGLRTGVKVAVVDATGK---LVATDTIYPHTGQAAKAAMTVAALCEKH 378 + +A V G+ +A + K V + Sbjct: 1033 TEDMAIVGICCTADGKDATYLASVTERGESNDFLAVPS--GTKVDQGKMREKVVTFLMQC 1090 Query: 379 NVELVAIG--NGTASRETERFYLDVQKQFPKV---------------------------- 408 + +G G SR R D+ K+ + Sbjct: 1091 RPAAIVVGTSGGFESRLLTRKMGDLLKEAEQRWTNRYIQGEDEDDEAFEIRQAAFRQLQP 1150 Query: 409 ------------TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE 456 ++ ++ A ++ S +EFPD V+L+ A+++AR QDPL E Sbjct: 1151 SAHFDDQDEGDWKCNVDLIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGE 1210 Query: 457 L-----VKIDPKSIG-------VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV- 503 L V D + G + Q + +T+L R+ + ++ D VG D+N+A Sbjct: 1211 LTYAWSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTF 1270 Query: 504 ----PLLTRVAGLTRMMAQNIVAWRDENGQ-FQNRQQLLKVSRLGPKAFEQCAGFLRINH 558 LL VAG+ A N+ + G R+ LL+ +GP + FLRI Sbjct: 1271 DHLRGLLVFVAGMGPRKAANLKQTLSQLGSALSRRRDLLENRMIGPVVYNNLVAFLRIRR 1330 Query: 559 GDN-------PLDASTVHPEAY---PVVERIL-------------AATQQALKDLMGNS- 594 D PLD + +HP+ Y +I AA+ +AL+D+M NS Sbjct: 1331 VDQLVEQFLHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSH 1390 Query: 595 ---------------------------------------SELRNLKASDFT----DEKFG 611 ++ L F D K G Sbjct: 1391 HEVERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLG 1450 Query: 612 --VPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF 664 + I E P DPR + E+ L+PG + G V +F Sbjct: 1451 RWHSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDF 1510 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 G+ V + + + +LS++ VE +V AG IV + V + + +++++++ Sbjct: 1511 GSRVKLEGEIPAFIPLRNLSDEHVETAEDIVAAGQIVTAVITMVKKEHMTVDMSLKMED- 1569 Query: 725 PGETNARRGGGNERPQNNRP-------AAKPRGREAQPAGNSAMMDALAAAMGKK 772 + ERP + P A + E A ++AL ++G K Sbjct: 1570 ----FRKNPSSWERPLSLPPIDVHFDLVAAAKIEEDNNKRREAHLEALQLSLGTK 1620 >UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ustilago maydis RepID=SPT6_USTMA Length = 1723 Score = 241 bits (615), Expect = 9e-62, Method: Composition-based stats. Identities = 137/787 (17%), Positives = 266/787 (33%), Gaps = 144/787 (18%) Query: 108 KPKRRTRGQIAIEAGL--EPLADLLWS--------DPSHTPEVAAAQYVYADKGVADTKA 157 + K+ ++A + G+ + LA + S DP +P A Q+ + G + Sbjct: 569 RNKKTVLAELAKKFGITSDELASNVTSHTRQYSPRDPEESPFKFAEQFTGSAWGAHSPEI 628 Query: 158 ALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE---EEGAKFRDY-FDHHE 213 AL A+ +L + +D L ++R A + ++ + ++ F ++ Sbjct: 629 ALAKAKMMLSQEIGKDPILKREMRQLFKDAAEINIEPTERGMTVIDDQHPYANFKFIANK 688 Query: 214 PLSTVP--SHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPA 271 P VP + L M + +E +++L ++ + + +G N Sbjct: 689 PARLVPQNPSQYLQMLQAEDELLIKLDIDLKDVVLTRFEARLYNNYASEGVGELSN--AW 746 Query: 272 DSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMG 331 + R+ V+ + ++ + L +RE + + + + + P ++ M Sbjct: 747 NEQRRDVIREALKTHLVPNGRIWLKEFLREESRETLLRHVDVLMTKRVQEGPFMSKSMMA 806 Query: 332 L--DP------------GLRTG--------VKVAVVDATGKLVATDTI----YPHTGQAA 365 DP + G V+ +D G+ T Q Sbjct: 807 RNRDPKIEEEDRIPRVLAVSHGGGDPRKDVVQAVYLDERGRFREHATFDDLRPLSARQMQ 866 Query: 366 KAAMTVA----------------ALCEKHNVELVAIGN----------------GTASRE 393 + + + L ++ ++V + TA +E Sbjct: 867 ERELELERTRGKAEFVDHRADFVKLLKQRRPDIVVVSGWSVRTAELKRHVQELADTAHQE 926 Query: 394 ---TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL 450 +R + D+++ + V + A +Y S AA+EFP+L R +++AR Sbjct: 927 ICDADRLHSDLERDQAVIDV--VTCHDDVARIYQHSSRAAEEFPELSELGRYCLALARYA 984 Query: 451 QDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVP---- 504 Q P+ E + D ++ + Q + Q +L + + VN GV++N A Sbjct: 985 QSPVNEFAALGSDLTAVILDPNQRLLPQDRLRLHFERCIGAVVNENGVEINQAMTSTYLQ 1044 Query: 505 -LLTRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRI----- 556 +L VAGL A +V G NR L+ + L + F+ CA FLRI Sbjct: 1045 TMLPFVAGLGPRKAHALVNAISTKLEGTLINRTLLISRNILTFQVFQNCASFLRIEQDML 1104 Query: 557 -----NHGDNPLDASTVHPEAYPVVERILA-ATQQALKDLMGNSS--------------- 595 + + LD++ +HPE Y ++ A A + +DL G Sbjct: 1105 LEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKHEEDLEGEHPSLPCKELMEDADPAD 1164 Query: 596 ELRNLKASDFTDEKF------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ET 644 +L L ++ F T+ EL KP D R + + + ET Sbjct: 1165 KLNTLDLDNYATMLFERKGERKRATLHSCRTELIKPYDDLREKQSEPSLEEMLTMFTGET 1224 Query: 645 MNDLQPGMILEGAVTNVTNFG------AFVDIGVHQDGLVHISSLSNKFVE---DPHTVV 695 L G ++ VT V + +G + + +V Sbjct: 1225 SKTLAEGFVVSVEVTRVQEGNRMQEGHIKCRLDSGIEGTIEAEHAVEHYTPGSVRLRDLV 1284 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQN----NRPAAKPRGR 751 + + V ++D + + L++ P E R + P + +R A Sbjct: 1285 RPQQTLDALVRKIDYKMCTVQLSIS----PWELQHRATHQGKTPIDIKFYDRRKADQWNE 1340 Query: 752 EAQPAGN 758 A Sbjct: 1341 HAAAKAK 1347 >UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria RepID=B4BRE9_9BACI Length = 239 Score = 238 bits (607), Expect = 7e-61, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 137/228 (60%), Gaps = 3/228 (1%) Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 TASV LL V+GLT+ +++NIV R+E G+F++R +L + RLG K +EQC GFLRI G Sbjct: 12 TASVSLLQYVSGLTKTVSENIVKRREEQGKFRSRDELKTIPRLGAKTYEQCIGFLRILDG 71 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL--RNLKASDFTDE-KFGVPTVT 616 + PLD + +HPE Y V+R+L + N + L E G T+ Sbjct: 72 EEPLDRTPIHPERYVEVKRLLQTLGFTTDAIGSNELRQALQALDIEATAAELGIGELTLR 131 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 DII L +P RDPR E V M DL+PGM LEG V NV +FGAFVDIGV QDG Sbjct: 132 DIIDALCRPERDPRDELPKPLLRKDVLKMEDLKPGMELEGTVRNVVDFGAFVDIGVKQDG 191 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 LVHIS LS ++V P +V GD+VKV V VD+ + RI+L+M E+ Sbjct: 192 LVHISKLSKQYVRHPLDIVSVGDVVKVWVEHVDVAKGRISLSMVSPEE 239 >UniRef50_UPI00019240C9 PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae), partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240C9 Length = 1005 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 91/486 (18%), Positives = 169/486 (34%), Gaps = 77/486 (15%) Query: 109 PKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD-----------------KG 151 P++RT I + GL +A + E Y + Sbjct: 525 PRKRTLYTICKDNGLLKMASNFGLTAAQFGENLRDNYQRHEPIQFSQTPLEAAESLICNT 584 Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL-VSTVVSGKEE-----EGAKF 205 +A L GAR+++ + + D + VR +NA + ++ GK+E A F Sbjct: 585 FPSAEAVLTGARHMVAMQISRDTLVKQNVRQMFIENAKIYITPTKKGKKEIDNNHPNAPF 644 Query: 206 RDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLR 265 + + +PL + + L M+ E ++++ + + SY ++I + Sbjct: 645 K--YLKSKPLRDLHGEQFLKMWHAEQENLVKMRIMIGQE-QHNQGFSYLDEIKQLYHRDE 701 Query: 266 LNNAPADS--WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 + + R +S + LE EL + + D AI R LH+ + AP Sbjct: 702 FSLLVQEWNKQRSEALSLALSKMLYPMLEKELKAKLLRESIDFAIQACTRKLHNWISVAP 761 Query: 324 AG-----------------LRATMGLD--PGLRTGVKVAVVDATGKLVAT---DTIYPHT 361 + P A++DA G++V + Sbjct: 762 YQPDSNQEGEYSTDNESSYGSRVLSCSFLPDRNAVSFFAMLDADGQVVDFLRLKYLLCRK 821 Query: 362 GQAAKAAM--------TVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT---- 409 K+ + K++ +VA+ E +R D+ + ++ Sbjct: 822 NSVKKSEQDAKISDMNKLKDFIRKYSPRVVAV--AAECCEAQRVLDDITEAVQELEQDHQ 879 Query: 410 ---AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----D 461 +V A +Y S EFP+ LR A+S+ RR+Q+PL E + + Sbjct: 880 MPHIYVELVPGEVARIYQNSPRGLMEFPEYPELLRHAISLGRRIQNPLVEFAGLCNFEEE 939 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMM 516 + + Q + L R+L+ + VN GVD+N A L + GL Sbjct: 940 LTCLRLHPMQDVLPTDLLQRRLEIEFINEVNLTGVDINRALDFPHMAVLTQFLCGLGPRK 999 Query: 517 AQNIVA 522 A +++ Sbjct: 1000 AGHLLK 1005 >UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Saccharomycetaceae RepID=SPT6_YEAST Length = 1451 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 147/843 (17%), Positives = 289/843 (34%), Gaps = 152/843 (18%) Query: 19 EQVDAAVRLLDEGN-TVPFIARYRKEITGG-------LDDTQLRNLETRLSYLRELEERR 70 E + A++ + + N VPFI YR+ L + L ++ + L ++ Sbjct: 372 EAIGNAIKFITKENLEVPFIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNKK 431 Query: 71 QAILK----------------------SISEQGKLTD-----------DLAKAINATLSK 97 + + SI+E L D ++ + K Sbjct: 432 DYVQRFYAELHIDDPIVTEYFKNQNTASIAELNSLQDIYDYLEFKYANEINEMFINHTGK 491 Query: 98 TELEDL----YLPYKPKRRTRG--QIAIEAGLEPLADLLWSD---------PSHTPEVAA 142 T + L Y +K + I I A E + + + S PS P Sbjct: 492 TGKKHLKNSSYEKFKASPLYQAVSDIGISA--EDVGENISSQHQIHPPVDHPSSKPVEVI 549 Query: 143 AQYVYADKG-----VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSG 197 + A+ G ++TK A+D + +++ + KVR K + + Sbjct: 550 ESILNANSGDLQVFTSNTKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYYLADVVLTAK 609 Query: 198 KEEEGAKFRDYFDHHEPLSTVPSH------RALAMFRGRNEGVLQLSLNADPQ--FDEPP 249 ++E K Y D ++ P H L M + +L + L+ Q + E Sbjct: 610 GKKEIQKGSLYEDIKYAINRTPMHFRRDPDVFLKMVEAESLNLLSVKLHMSSQAQYIEHL 669 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 + E + + NN ++ + + K+ + E+ + + + Sbjct: 670 FQIALETTNTSDIAIEWNNFRKLAFNQAM------DKIFQDISQEVKDNLTKNCQKLVAK 723 Query: 310 VFARNLHDLLMAAPA-------GLRATMGLDPG----LRTGVKVAVVDATGKLVATDTIY 358 L AP + + L G + V+ G + I Sbjct: 724 TVRHKFMTKLDQAPFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIV 783 Query: 359 PHTGQA---AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKV------- 408 + K T+ + + AIG + +T++FY +Q+ K Sbjct: 784 DNPFDKTNPEKFEDTLDNIIQSCQPN--AIGINGPNPKTQKFYKRLQEVLHKKQIVDSRG 841 Query: 409 -TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI---DPKS 464 T + V + A Y SE AAQEFP+ ++ +++AR + PL E + + +S Sbjct: 842 HTIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRS 901 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMA-Q 518 + + +Q+ +S QL+ L+ D VN V V++N A+ L ++G + A Sbjct: 902 LSIHPHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAID 961 Query: 519 NIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD----------NPLDASTV 568 + + + N RQQL+ + L F AGFL I+ + + LD++ + Sbjct: 962 FLQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRI 1021 Query: 569 HPEAYPVVERILAATQ--------------------QALKDLMGNSSELRNLKASDFTDE 608 HPE Y + ++ A + L++ ++L +L + +E Sbjct: 1022 HPEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEE 1081 Query: 609 ------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGA 657 + + I+ EL + R +F Q + E+ G I+ Sbjct: 1082 LEKNTGLRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVR 1141 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP-HTVVKAGDIVKVKVLEVDLQRKRIA 716 V + + +V+ + + P + + + G KV+ +D Sbjct: 1142 VERFWHNDIICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAE 1201 Query: 717 LTM 719 +++ Sbjct: 1202 VSL 1204 >UniRef50_A4S671 Predicted protein n=2 Tax=Ostreococcus RepID=A4S671_OSTLU Length = 1245 Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 143/852 (16%), Positives = 265/852 (31%), Gaps = 146/852 (17%) Query: 51 TQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYL----- 105 + + +LE R+ I ++ + + + A + YL Sbjct: 195 DVIDAIMEWDERYVKLELRKARIASALEQAANEKGESEQGHVARQCMELVRVAYLDKHVD 254 Query: 106 -------PY-----------KPKRRTRGQIAIEAGL-------EPLADLLWS-------- 132 + +P R+T+ ++ G+ P A+ Sbjct: 255 DAEAKANLFFASLDANSKLRRPGRKTQYDAHVKRGIRDLVNMSGPTAEAFGEAIKSGIPS 314 Query: 133 --DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL 190 + TPE A VY D+G A++ + + ++ + RD +A + Sbjct: 315 ELMANLTPEDVAK--VYFDQGYANSDEVMQAFVNVAATEIGAESEVRKWFRDEFLGHATI 372 Query: 191 VSTVVSGKEEEGAKFRDYFDHHEPLSTV--------PSHRALAMFRGRNEGVLQLSLNAD 242 + EG D + P+ + + + G+ G+L++ + Sbjct: 373 TTQPTP----EGTDIIDPWHPIAPVKRLLKMPVYILQGEQFAQILEGKRRGLLKVDIGFG 428 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + E + + + + + + R+ V+ +L E + Sbjct: 429 DERLTSVIERMEKAYLSESMSDLAS--TWNEVRRRVIRAALEEHLLPTFSRETASQLALD 486 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLR-------TGVKVAVVDATGKLVATD 355 A D A + + AP T D +R + +D+ G+LV D Sbjct: 487 ARDALNRACADGAWNYICHAPWRPANTEDQDIEVRVVAAVSGSPATFVALDSAGELV--D 544 Query: 356 TIYPHTGQA----------------AKAAMTVAALCEKHNVELVAIG--NGTASRETERF 397 I HT + +H + +G + R E Sbjct: 545 FIQCHTLGRNIGGPGNVGGAQMMNQQDEIQALMDFIVQHRPHVCCVGASGMDSKRVKESL 604 Query: 398 ---YLDVQKQFPKVTAQKV------IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIAR 448 + ++ P+ ++V V ++ A + ++ E P+ S+ AV++ R Sbjct: 605 NLVVGRIIEEQPRAIPEEVSEIAVHFVDDSVAKLCENAKETKAEMPEQQPSVLRAVALGR 664 Query: 449 RLQDPLAELVKI----DPKSIGVGQYQHD-VSQTQLARKLDAVVEDCVNAVGVDLNTASV 503 L +P A + + + S+ + Q +S+ ++ + + VN VGVD+N AS Sbjct: 665 GLLNPAAVVASLVSGGEVASLRMCPLQDSMLSKDDRVAIVERQLINLVNQVGVDVNMASA 724 Query: 504 P-----LLTRVAGLTRMMAQNIVAWRD--ENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 LL V GL A ++ E G +R+ L LG F A FLRI Sbjct: 725 HPWCSVLLRYVGGLGPRKATLVINAVRTTEGGVVDSREDLKSA--LGEVVFRNAASFLRI 782 Query: 557 NHGDNPLDASTVHPEAYPVV----------------------ERILAATQQALKDLMGNS 594 D LD++ HPE Y ERIL + Sbjct: 783 TEAD-MLDSTRCHPERYEQAMAIVVNALELEANLAAMDKYERERILQKVFDPKTWEQKVA 841 Query: 595 SELRNLKASDFTDEKFG--VPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMND 647 + A E G + + +I E P + RP + D ETM+ Sbjct: 842 PLILEEYAEYLESEGAGKSLEALREIRIEFRHPFEELRPPWMPLTAEDEFALLTGETMHT 901 Query: 648 LQPGMILEGAVTNVT----NFGAF--VDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDI 700 L G +++ V + GA + G V +S+ V G + Sbjct: 902 LSAGKLIQCTVKKIEGPRDGRGARAVCTLDSGLTGYVEKYDVSDDQSFSRIEEKVALGQV 961 Query: 701 VKVKVL--EVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 + +V VD+ + L P ET + N + + E + Sbjct: 962 ITARVKPDGVDVHNFSVQLACSSSALHPDETLQWEQHLHYTEANGYYSMVKQPGEVRLKK 1021 Query: 758 NSAMMDALAAAM 769 + D Sbjct: 1022 QKSKKDMQKRTF 1033 >UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968DE9 Length = 197 Score = 217 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 2/199 (1%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M F R+I+ + +Q+ + LL++G T+PFI+RYRKE TGGLD+ Q+ ++T Sbjct: 1 MIQLFHRMISAALGISEKQIGHTLDLLEDGATIPFISRYRKEATGGLDEVQIEAIKTHYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 L E +R++ I+ +ISEQGK+T +L K I+ T T LED+YLPYKPKRRTR ++A + Sbjct: 61 KLNETAKRKETIINTISEQGKMTPELQKRIDETWDSTILEDIYLPYKPKRRTRAEVARQK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA LL PE A YV + V D + AL GAR I+ E+ +ED VR Sbjct: 121 GLEPLATLLMLQREPNPEKRAEAYVKGE--VKDAEDALKGARDIIAEQVSEDEQARNTVR 178 Query: 182 DYLWKNAHLVSTVVSGKEE 200 + K Sbjct: 179 FAFLPASRHHRQSSERKRN 197 >UniRef50_Q55A48 SH2 domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q55A48_DICDI Length = 1754 Score = 210 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 84/437 (19%), Positives = 171/437 (39%), Gaps = 62/437 (14%) Query: 343 AVVDATGKLVAT---DTIYPHTGQAAKAAMT-----VAALCEKHNVELVAIGNGTASRET 394 AV+++ G++++ D I G++ K + +C+++ LV + ++ Sbjct: 803 AVLNSDGEVLSHIKLDFICDRLGESLKEKKEKDIKRLEEICQEYQPRLVLVS--ATEMDS 860 Query: 395 ERFYLDVQKQFPK-------VTAQKVIVS----EAGASVYSASELAAQEFPDLDVSLRGA 443 +R Y +V+ + + + V+++ E G S+ ++S L +EF + LR Sbjct: 861 KRLYEEVKDHLQRWSNGERRIIRKSVLLNYYSPEIGLSLQTSSRL-QEEFKEYPPILRHT 919 Query: 444 VSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL 498 +++ R DP+ E + + + + Q + + L + L + VNAVGVD+ Sbjct: 920 IAVGRCALDPITEYASLCNDHNEILFLKLHPLQDMIGKDYLVKLLHRCFINVVNAVGVDI 979 Query: 499 NTA-----SVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGF 553 N + L V+GL AQ ++ G F +Q L+ + C GF Sbjct: 980 NRMIQCRFTSATLQFVSGLGSRKAQMLLNSLFRRGGFVTSRQSLEKVLSQDVIYRNCIGF 1039 Query: 554 LRINHG------DNPLDASTVHPEAYPVVERILAATQQA----------LKDLMGNSSEL 597 ++I + LD + +HP +YP+ RI A ++D++ +L Sbjct: 1040 IQIRERHAADYKADLLDDTRIHPTSYPITYRIAAEALDKNLDERNFHSYIEDIIKRPKKL 1099 Query: 598 RNLKASDFTD------EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMN 646 L F D ++ + I KEL P D R ++ ET Sbjct: 1100 DRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFADIRHPYEEPSADTIFEWLTGETNQ 1159 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 L+ G ++ + + +G + +S+ + G + +V+ Sbjct: 1160 SLRRGTLVTVTTIRTFDNSVKCRLDNGLEGSIPTDCISD---NGETKSLGRGVTINCRVM 1216 Query: 707 EVDLQRKRIALTMRLDE 723 VD + ++L+ + + Sbjct: 1217 GVDKYQFTVSLSCKPSD 1233 Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 44/236 (18%), Positives = 78/236 (33%), Gaps = 13/236 (5%) Query: 102 DLYLPYKPKRRTR-----GQIAIEAGLEPLADLLWSDPSHT--PEVAAAQYVYADKGVAD 154 DLY Y ++ G A E G + L D ++ E + V+ + Sbjct: 503 DLYTIYTKAGLSKFLPNFGMTAQEFG-QNLMDNYTTNKPRDQMAEPSTMALVHICLEADN 561 Query: 155 TKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFD---- 210 L RY++ + D + VR K AH+ +T +E F YF Sbjct: 562 KDRVLQATRYMMAQEIGYDPHVRYSVRMIYRKYAHITTTPTLKGFKEIDVFHPYFTVKSI 621 Query: 211 HHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAP 270 +P + L + + EG ++ ++ + E + + G Sbjct: 622 QEKPAHLFEDSQYLLILKAEKEGFIKSTMAITEKTHNSVIIPEMESLYLSD-GTSAITQQ 680 Query: 271 ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGL 326 + RK ++ + LE EL + A + A+ L D + AP Sbjct: 681 WNEQRKLIIREALNKFLYPVLEKELRNKLLTEASNRVAFECAKKLEDKIRVAPWRP 736 >UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEV9_RHOBA Length = 1257 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 85/383 (22%), Positives = 151/383 (39%), Gaps = 19/383 (4%) Query: 210 DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNA 269 P + + S + + + R V Q + + D + N Sbjct: 410 GKSMPANKLSSFQLVMLGRALRSQVAQCAFDYDAAKLVAELQK---------TAAGFNRP 460 Query: 270 PADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRAT 329 AD V+ + E ++E+A +++ A NLH + + Sbjct: 461 LADRLSGLVLEN--EAIIRDAAEAAWWDELQEQASARLVSIAADNLHSQINRGGVEAKVV 518 Query: 330 MGLDP-GLRTGVKVAVVDATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIG 386 M +D G RT ++V + G+L+ ++ I A + A + L H+V+L+ I Sbjct: 519 MSIDAVGPRTAA-TSIVSSDGRLLHSEDIPCQLSAAMRTLAVTKMGELIHAHHVDLIVIS 577 Query: 387 NGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSI 446 NG A R ++ KQ + + + +GA Y+ QE R A I Sbjct: 578 NGPARRACMIAVGELIKQSADKSVRWTLADRSGADAYAGGPAGDQEMKSTPRRFRAAAWI 637 Query: 447 ARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLL 506 A P LVK+DP + +G +Q ++S + L+ V+ GVD+N+ + + Sbjct: 638 AFSAMQPAQALVKVDPLKLRLGSFQRELSDDAVLSALEDVMVSGAARGGVDVNSTATTWM 697 Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFE--QCAGFLRINHGDNPLD 564 R+ G+T ++Q I R E +R+ L P Q FLR+ + LD Sbjct: 698 QRLPGITPDISQAIDERRREK-LIASREDLATAVEW-PSVVNSRQAMPFLRVFASEETLD 755 Query: 565 ASTVHPEAYPVVERILAATQQAL 587 + +HP+ YP+ +++ A L Sbjct: 756 GTLIHPDDYPLAKKLATALNVEL 778 Score = 93.5 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 63/126 (50%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + G +++ L P + E + + ++++L+ G + G V V FG F+ Sbjct: 940 QIGKRRSHQLVRWLCDPFGEGASEGEAPAVMTAMPSLSELKQGDQVIGVVVGVMPFGVFI 999 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 ++ GL+H+S +S+ +VED H V+ GD++ V D +R+R+AL+ E+ Sbjct: 1000 ELSPDCSGLIHVSRISDSYVEDLHEAVQVGDVITAWVTGTDAKRRRVALSAISPEREAAM 1059 Query: 729 NARRGG 734 +RR Sbjct: 1060 ESRRQN 1065 Score = 65.4 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 17/196 (8%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA + + A+ L+++G T PF++RYR++ G +D+ L NL + ++L+E Sbjct: 8 IAQRGRCEVSSLRLALPLIEQGYTPPFLSRYRRDELGDIDEASLWNLAHAVRTQKKLDEY 67 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRT-----RGQIAIEAGLE 124 R + ++ + + +AI SK L+ L + K T Q L Sbjct: 68 RSDLQEAWKQTPLADPAIGRAIGNAQSKRLLDRLSR--RVKLETGESANLAQRLAVRTLN 125 Query: 125 P----------LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDA 174 P LA+ L ++P+ A + + D AL + +R D Sbjct: 126 PQKGDGEDLKALAESLAAEPAAVETTAEGEAASPEPASNDVDGALAKLDATIAKRLIGDP 185 Query: 175 ALLAKVRDYLWKNAHL 190 ++ +L +NA + Sbjct: 186 RIVGAAVRWLSRNAKI 201 >UniRef50_Q6BVE1 Transcription elongation factor SPT6 n=7 Tax=Saccharomycetales RepID=SPT6_DEBHA Length = 1439 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 148/916 (16%), Positives = 280/916 (30%), Gaps = 179/916 (19%) Query: 19 EQVDAAVRLLDEG-NTVPFIARYRKE--------------ITGG----LDDTQLRNLETR 59 E V V + + VPFI +R++ +T L + L + Sbjct: 327 EAVSKVVEFISKDVYEVPFIWTHRRDFLLYSEEIKNEDGSVTNSVHKLLFEDDLWRIFQL 386 Query: 60 LSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPYK--------- 108 L E+R I K I L DDL K + + + ++DL Y+ + Sbjct: 387 DIEYHSLYEKRVNIEKLIESLN-LDDDLVKDVKSLETMVAIQDLQDYINFTYSTEIRKLY 445 Query: 109 ------------PKRRTRGQI-------------------AIEAG----------LEPLA 127 K+ ++ I A E G E Sbjct: 446 DDKETEGIDANITKKHSKYAIFERIKSNVLYDAVNAFGISAKEFGENVQDQSSKKFEVPY 505 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGV--ADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 + +D + + D V D K AL+ R E + + +VR Sbjct: 506 RIHATDDHIESPEDLIERLCEDDEVLFKDPKNALNAVRKTFAEEIFHNPKIRHEVRTTFK 565 Query: 186 KNAHLVSTVVSGKE--EEGAKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLN 240 A + V + + + + D + + + + L M G++ + + Sbjct: 566 DFASIRVAVTEKGKAIDNHSPYADIKYAINRSPADLVRNPDVLLRMLEAEAAGLVVVKVE 625 Query: 241 ADPQFDE-----PPKESYCEQIIMDHLGLRLNNAPADSWRKG--VVSWTWRIKVLMHLET 293 +S I + ++++ +VS + + E Sbjct: 626 TKDYDSWFQCIFNCLKSDGSSEIFEKWNKEREFVLNMAFKRLTSMVSMNTKEDLRRECER 685 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 + VR R P L + G + V A + +GK+ Sbjct: 686 LIASEVRRRFLARIDQAPFTPFGFDKGTKPNVLALSFGKG-DFDSAVIGAFLRESGKVDE 744 Query: 354 TDTIYPHTGQAAKAAMTVAALCEKH--------NVELVAIGNGTA-----------SRET 394 + + ++ + ++ +++ + A ET Sbjct: 745 FFKSEDNPIRDRESEDKFSGQLKEFFDKNLRNQKPDVIVVSGYNAISKKLFDSVKSFVET 804 Query: 395 ERFYLDVQKQFPKVTAQKVIV---SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 + ++ + V A+++ SE A EF D + V +AR +Q Sbjct: 805 NNVTANTEELTDVQNPPLIQVIWGQSETATLFQNSERARIEFSDKPTLAKYCVGLARYVQ 864 Query: 452 DPLAELVKIDPKSIGVG--QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVP 504 PL E + + + + ++Q +S + +++ D +N VGV++N A Sbjct: 865 SPLLEYLSLGEGILSLTFFEHQKLISTDLVMEAIESAYVDIINMVGVEINEAIRDPYIAQ 924 Query: 505 LLTRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-- 560 LL VAGL A ++ + NR L++ F C+ FL I + + Sbjct: 925 LLPYVAGLGPRKASGLLRNINSKLGSTLANRSDLIENELSTANIFINCSSFLNIPYDEGL 984 Query: 561 -------NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL----------KAS 603 LDA+ +HPE Y + ++ A ++ M + E + K Sbjct: 985 SMRDSSVELLDATRIHPEDYDLARKMAADALDLDEEDMAHVEEQGGIIYQLMQDGVNKVD 1044 Query: 604 DFTDEKFGVP-----------TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMND 647 D +G T+ I +EL + R F + + ET Sbjct: 1045 DLNLTAYGKELESKFGKKKYATLQSIKEELVNNFEEIRRSFHILESHEVFHMLTGETTES 1104 Query: 648 LQPGMILEGAVTNV-TNFGAF---------VDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 I+ V V NF F V G + +S+ + Sbjct: 1105 FTRNTIVPVTVNKVGQNFRDFENSKIKFAKVTTSSFIQGNIEEASIPQGI------DLAQ 1158 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 G +V+ VL+ + ++ E + ++G + ++ EA+ A Sbjct: 1159 GQVVQAVVLDAYYDSFTASFSL------LEADIQKGAAPKFHKD----PLKWNFEAEQAD 1208 Query: 758 NSAMMDALAAAMGKKR 773 M A + K R Sbjct: 1209 KQKEMAKERAQLAKTR 1224 >UniRef50_C1E5G2 Transcription elongation-nucleosome displacement protein n=2 Tax=Micromonas RepID=C1E5G2_9CHLO Length = 1566 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 128/749 (17%), Positives = 248/749 (33%), Gaps = 116/749 (15%) Query: 111 RRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERF 170 RRT+ A P +PE A YV + G AD + + ++ Sbjct: 549 RRTKVSQA--------------VPDMSPEAVAEVYVGDETGYADVSSVIRSLVHVAAAEI 594 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKF----RDYFDHHEPLSTVPSHRALAM 226 A + A+ A +R + + A + + E F +P A+ Sbjct: 595 AAEPAVRAWLRRAIRRKACVWTQPTPAGTEAMDPFHPLAEIKRLQGKPACEFGGAEFGAV 654 Query: 227 FRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 + +G+++L + + + ++ ++ ++ AD+W K K Sbjct: 655 LKAHRDGLIKLRIALP----DVVIQELTNEMESAYVIEEVSEM-ADAWNKLRRDALAGAK 709 Query: 287 VLMHL--ETELMGTVRERAEDEAINVFARNLHDLLMAAP----AGLRATMGLD------- 333 + E + A E + +L + AP G D Sbjct: 710 AALLPALTREAAVALERDAASEIRRLCGESLWRRVALAPWKPDVRDHDQFGADDEVEVRV 769 Query: 334 ------PGLRTGVKVAVVDATGKLVAT---------DTIYPHTGQAAKAAMTVAALCEKH 378 PG A++DA G+LV T + + +H Sbjct: 770 LAAVWGPGDPPTTF-AMLDADGELVDFLQCPNIAVGGKFGAATARRQADMDRLIQFMIEH 828 Query: 379 NVELVAI----GNGTASRETERFYLDVQKQFPKVTAQKV----------IVSEAGASVYS 424 + + G A R + V + + A+ + + + ++ + Sbjct: 829 RPHVCVVATAPGQLHACRNLKENIALVIGKILEDHARAIPEEVNTIQLHFIDDTVPALAA 888 Query: 425 ASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----DPKSIGVGQYQHDVSQTQLA 480 + EF + +R AV++ R +++ A + + + +++ +G Q ++ + Sbjct: 889 SCAAMRTEFIEHSTEIRHAVALGRYIRNSAAVVAALAAGGEARALNLGPLQDALTPEEKM 948 Query: 481 RKLDAVVEDCVNAVGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWRD--ENGQFQNR 533 + + D +N GVD+N A L VAGL A ++VA G ++R Sbjct: 949 GIFERGLIDVINQCGVDVNAAVAHPWQQYQLHYVAGLGPRKAGSLVAAVRGSSGGALESR 1008 Query: 534 QQLLKVSR-LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI-----------LA 581 QL+ LGP ++ A LR+ D+ LD + +HPE Y I L Sbjct: 1009 DQLVSELGALGPCVYKNAATTLRVID-DDVLDRTRIHPERYDHTLEIIANAFDYDFENLK 1067 Query: 582 ATQQALKD-------LMGNSSELRNLKASDFTDEKFGVPT------VTDIIKELEKPGRD 628 + ++K N +L L + + G + + ++ EL P + Sbjct: 1068 SASASVKRKTLERAMDPDNWDKLAVLDLRAYAEYLNGQGSGWLLSALRELRMELRDPFGE 1127 Query: 629 PRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNV--------TNFGAFVDIGVHQD 675 R ++ + ET L PG I+ V + T V + Sbjct: 1128 IRMSWQPLSTWEEFSLLTGETRESLSPGKIVHCTVKRLVPPRREEGTEGHVVVQLESGVM 1187 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 G + S LS++ V+ V G ++ +++ + + + L + E + R Sbjct: 1188 GHIAKSDLSDRPVDRLEHKVAVGQVIAARIINANYEENTVYLKCKGSALSAEESKRIEFQ 1247 Query: 736 NERPQNNRPAAKPRGREAQPAGNSAMMDA 764 + G A+P DA Sbjct: 1248 TWGNKLYYSCEPLDGEVAKPTKPKKRKDA 1276 >UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Candida albicans RepID=SPT6_CANAL Length = 1401 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 134/778 (17%), Positives = 256/778 (32%), Gaps = 157/778 (20%) Query: 29 DEGNTVPFIARYRKEITGGLDDTQ----------------LRNLETRLSYLRELEER--R 70 E VPFI +R++ +D R ++ + Y E+R Sbjct: 338 KENLEVPFIWNHRRDYLEYVDPDAPIPGSVRELMISEDDVWRIVKLDIEYHSLYEKRLNT 397 Query: 71 QAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPY---------------KPKRRT 113 + I+ S+ + D+L K I S ++D+ Y+ + K + Sbjct: 398 EKIIDSLE----IDDELVKDIKTLDSMVAIQDMHDYIQFTYSKEIRQREETQNRKHSKFA 453 Query: 114 RGQIAIE--------------------------AGLE-PLADLLWSDPSHTPEVAAAQYV 146 + E G E P DP +P+ + + Sbjct: 454 LYERIRENVLYDAVKAYGITAKEFGENVQDQSSKGFEVPYRIHATDDPWESPDDMIERLI 513 Query: 147 YADKGV-ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE---EEG 202 D+ + D K A D R + + + +VR A + V + Sbjct: 514 QDDEVIFRDEKTARDAVRRTFADEIFYNPKIRHEVRSTYKLYASISVAVTEKGRASIDAH 573 Query: 203 AKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYC-EQII 258 + F D + + + + L M G++ + + + C + Sbjct: 574 SPFADIKYAINRSPADLIAKPDVLLRMLEAERLGLVVIKVETKDFANWFDCLFNCLKSDG 633 Query: 259 MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDL 318 + + N R + V ++ + +L + I A + Sbjct: 634 FSDISEKWNQERQAVLRTAISRLC--AVVALNTKEDLRREC-----ERLI---ASKVRHG 683 Query: 319 LMA-------APAG-----LRATMGLDPG---LRTGVKVAVVDATGKLVATDTIYPHTGQ 363 L+A P G + L G + V + GK+ + + Sbjct: 684 LLAKIEQAPFTPYGFDIGSKANVLALTFGKGDYDSAVVGVYIKHDGKVSRFFKSTENPSR 743 Query: 364 AAKAAMTVAALCEKH-----NVELVAIGNGTASRE---------TERFYLDVQKQFPKVT 409 + ++ ++V + A+ + + + V+ +F + Sbjct: 744 NRETEDAFKGQLKQFFDEDETPDVVVVSGYNANTKRLHDVVYNFVSEYGISVKSEFDDGS 803 Query: 410 AQKVIV---SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKS 464 +Q V V + A +Y SE A +EFPD ++ A+S+ R LQDPL E + + D S Sbjct: 804 SQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYAISLGRYLQDPLLEYITLGDDILS 863 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQN 519 + ++Q +S + +++ D VNAVGVD+N + L V GL A Sbjct: 864 LTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDINESVRDSRLAQTLKYVGGLGPRKASG 923 Query: 520 IVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRI---------NHGDNPLDASTV 568 ++ + R QL++ F C+ L+I + LD + + Sbjct: 924 MLRNIAQKLGSVLTTRSQLIEYELTTRTIFINCSAALKISLNKSINVKDFEIEILDTTRI 983 Query: 569 HPEAYPVVERILAATQQALKD-------------LMGNSSELRNLKASDFTDE------K 609 HPE Y + ++ A ++ L + S+L L +DF ++ K Sbjct: 984 HPEDYQLAMKMAADALDMDEESELHEKGGVIKELLENDPSKLNLLNLNDFANQIYKLTHK 1043 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM----ILEGAVTNVTN 663 ++ I EL + + R F+ D + +P M ++ +T VT Sbjct: 1044 LKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFFILTGEKPQMLKNTVIPATITKVTK 1101 >UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assembly factor, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WJY9_CANDC Length = 1403 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 114/626 (18%), Positives = 210/626 (33%), Gaps = 89/626 (14%) Query: 133 DPSHTPEVAAAQYVYADKGV-ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLV 191 D +P+ + + D+ + D K A D R + + + +VR A + Sbjct: 499 DAWESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFHNPKIRHEVRSTYKSYASIS 558 Query: 192 STVVSGKE---EEGAKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQF 245 V + + F D + + + L M G+ + + Sbjct: 559 VAVTEKGRATIDTHSPFADIKYAINRSPGDLIAKPDVLLRMLEAERLGLAVIKVETKDFS 618 Query: 246 DEPPKESYC-EQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 C + + + N R+ V++ ++ + + +R E Sbjct: 619 SWFQCIFNCLKSDGFSEISEKWNKE-----REIVLNLAFKR-LCSMVALNTKEDLRRECE 672 Query: 305 DEAINVFARNLHDLLMAAPAGL--------RATMGLDPG---LRTGVKVAVVDATGKLVA 353 N R L + AP + L G + V + GK+ Sbjct: 673 RLIANKVRRGLLAKIEQAPYTPYGFDIGSKSNVLALTFGKGDYDSAVVGVYIKHDGKVSR 732 Query: 354 TDTIYPHTGQAAKAAMTVAALCEKH--------NVELVAIGNGTASRE---------TER 396 + + + ++ +++ + A+ + Sbjct: 733 FFKSDDNPSRNRETEDAFKGQLKQFFDEDLRDETPDVIVVSGYNANTKRLYDVVYSFVSE 792 Query: 397 FYLDVQKQFPKVTAQKVIV---SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 F + V+ F T+Q + V + A +Y S+ A +EFPD ++ AVS+ R LQ+P Sbjct: 793 FGISVKSDFEDGTSQLIKVVWGQDETARLYQNSDRAKKEFPDKPTLVKYAVSLGRYLQNP 852 Query: 454 LAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPL-----L 506 L E + + D S+ ++Q +S + +++ D VNAVGVD+N A L L Sbjct: 853 LLEYIALGDDILSLTFHEHQKLISNDLVKEVVESAFVDIVNAVGVDINEAVRDLRLAQTL 912 Query: 507 TRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---- 560 V GL A ++ N NR L++ F CA L + G Sbjct: 913 QYVGGLGPRKASGLLRNIGSNLGSVLVNRSALVEEELTTANIFINCASALNVVVGKSVNS 972 Query: 561 -----NPLDASTVHPEAYPVVERILAATQQALKDLMGN-----------SSELRNLKA-- 602 LD++ +HPE Y + ++ A + ++ M + + R L A Sbjct: 973 KDFEVEILDSTRIHPEDYELARKMAADALEVDEEDMEHLGRGGVINQLMKDDPRKLNALN 1032 Query: 603 ----SDFTDEKFGVP---TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM--- 652 + +E+ G T+ I +EL + R F+ D + +P Sbjct: 1033 LLAFAKELEERIGKKKFRTLQAIKEELINNYEEVRAPFRILNNEDAFFILTGERPQQLKN 1092 Query: 653 -ILEGAVTNVTNFGAFVDIGVHQDGL 677 I+ +T V F D GL Sbjct: 1093 TIIPVTITKVNKN--FNDPYAKIRGL 1116 >UniRef50_A9V9Y8 Predicted protein n=2 Tax=Fungi/Metazoa group RepID=A9V9Y8_MONBE Length = 1839 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 103/561 (18%), Positives = 203/561 (36%), Gaps = 84/561 (14%) Query: 154 DTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSG------KEEEGAKFRD 207 D + ++ ++ L A+ A+ R+ + + A L K + AK+R Sbjct: 689 DVEEIVNRLQHCLAREIAQHPAVRGHFRERIRRMALLTVRPTKKGFQLIDKWDVLAKYR- 747 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 F ++P+ T+ L + +G+ G+L+ S + EQ I+ L + Sbjct: 748 -FLTNKPVDTLNDDTFLWLIKGKRAGLLEYSFAVSDH-----TATEIEQAILGALQFTVM 801 Query: 268 NAPADSWRK---GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 + A W+ +V R +L+ + E+ + AE A + + + AP Sbjct: 802 DDMALKWKPHINAIVRDCVRDMLLVDMIEEVEKKLTAEAELFVEEQCANFVRNFVSRAPF 861 Query: 325 GLRATMGLDPGLRTGVKVAV--------------VDATGKL-----VATDTIYPHTGQAA 365 ++ G GV+V ++ G + + H Sbjct: 862 QPD--FAVEEGREDGVRVTACILGDMGEASFLVHLNGYGDVVDFIKLDNLGFSEHARNER 919 Query: 366 KAA------MTVAALCEKHNVELVAIGNGTASR-----------ETERFYLDVQKQFPKV 408 A + + +++ +G A R + R + + FP V Sbjct: 920 DAQRRRDDNERIKNFLLLNVPDVLVVG---ADRQPALHLHRTFGDMVRNIREEVEDFPPV 976 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 + + +V A +Y+ S + +EF + SL A+ + R++Q+P + + D Sbjct: 977 SVE--LVETQVAELYARSVPSKKEFAEYHFSLITAIGLGRQVQNPELMMATLYNEDEDFL 1034 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQ 518 I + Q +S+ +L KL + VN +DL A+ L + GL + A Sbjct: 1035 HISMHPLQEFISKDRLRTKLIQEMSVAVNRSCIDLVAAASKPQLANALQFICGLGKHKAA 1094 Query: 519 NIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN--------PLDASTVH 569 +++ R +F R+QL + LGP + FL ++ + LD +H Sbjct: 1095 ALLSHLRPTVREFHGRRQLADMEGLGPCTAYNASAFLIVHPSPDYDEPEQSSRLDELLIH 1154 Query: 570 PEAYPVVERILAATQQALKDLMGNSS--ELRNLKASDFTDEKFGVPTVTDIIKELEKPGR 627 PE+Y +I + + + +L N D+ G + + L R Sbjct: 1155 PESYKYATKICMDAVGYSEHIGEDEDANQLANEAIGKILDDASGREKLERLDNSLADYNR 1214 Query: 628 DPRPEFKTAQFADGVETMNDL 648 + T D ++T+ D+ Sbjct: 1215 YLQ----TLGLPDMLQTLQDI 1231 >UniRef50_A0DQ53 Chromosome undetermined scaffold_6, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DQ53_PARTE Length = 1501 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 111/729 (15%), Positives = 235/729 (32%), Gaps = 143/729 (19%) Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 + LWS ++T E + + + + LM + + + + Sbjct: 391 EELWSHQANTTEFKSQD---------SSAEYVKLLQKYLMNELYHHPFIRSFMSQIYRDH 441 Query: 188 AHLVSTVVSGKEEEGAKFRDYFD----HHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + + +E ++ H + + R G + +S Sbjct: 442 LLISTEPTQLGNKEITAVSYFYPVKRIRHRQYKYMEDQTWMQCLRAEQLGYINISFTVSK 501 Query: 244 QFDEPPKESYCEQIIMDHL--GLRLNNAPAD-----SWRKGVVSWTWRIKVLMHLETELM 296 D ++ + I++ +++++ + +R ++ + LE ++ Sbjct: 502 DKDHKKEKIPRDDIMVLLYDKFVKIDDQQKEQESIMRFRDLILRGILQELWYPILEKQIK 561 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPA-------GLRATMGLDPG-------------- 335 ++ + + + + L+ P LR + +P Sbjct: 562 QKLQTLSTKHIVRMCQQKFKSLINKQPHISELANNQLRQQLITNPDVKIMSLVIGQEQSD 621 Query: 336 ------LRTGVK-------VAVVDATGKLVATDTI-YPHTG--------QAAKAAMTVAA 373 +A++D G+ + Y Q K + + + Sbjct: 622 GKLLKTYSQDCSIQKKCIGMAIIDYKGEQQSLQIFNYLTQDERRTEMLEQIRKEQVLLDS 681 Query: 374 LCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT-AQKVIVSEAGASVYSASELAAQE 432 EK+ +LV I + + + D++K++ + + Q + + +YS SE + + Sbjct: 682 FFEKYKPDLVVISANHS--DCLKLRADLRKKYKQTSSVQITLADSQISRIYSMSEKSNLQ 739 Query: 433 FPDLDVSLRGAVSIARRLQDPLAELVKIDPK--------SIGVGQYQHDVSQTQLARKLD 484 PD L+ A+S+AR +P+AE++ + + + Q VSQ L L Sbjct: 740 SPDTPQILKEAISLARYKLNPMAEVLNLWSDAIDKNGCLHLNLHPLQSMVSQQVLLDALK 799 Query: 485 AVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQNIVAWRD---ENGQFQN---- 532 + VN VGVDL + + V GL R A++++ F N Sbjct: 800 QTATEIVNQVGVDLVDCTLHKHLADQMQFVNGLGRRQAKHLITMVKGLLSKSLFNNNYED 859 Query: 533 -------------------RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY 573 RQ +LK L F+ GF++I G PLD + + + Y Sbjct: 860 ERLIYSKLEQDQKEYIQIERQDILKTQILKKVVFKNVQGFIKIQRGIQPLDITRMQIKMY 919 Query: 574 PVVERILAAT----------QQALKDLMGNSSELRNLKASDFTDEK-------FGVPTVT 616 I ++ LM ++ +L+ D+ ++ Sbjct: 920 SDAVHIARCALEVGGRDDKQNTVVRQLMSQPHKMEDLQLEDWAKQRELRDGSEKFTLVAQ 979 Query: 617 DIIKELEKPG------RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 + +EL P + +A E+ + +++G +T Sbjct: 980 FMKEELANPFLYKFDTSNKDMSNSEIFYAITQESPYTFRKNSVVQGLITKKLESR----- 1034 Query: 671 GVHQDG---LVHISS---LSNKFVED-PHTVVKAGDIVKVKVLEV---DLQRKRIALTMR 720 ++DG L+ +S+ ED G IVK V + + K +L + Sbjct: 1035 DRNKDGDRLLIKLSNNGLCGTLRKEDMLEQEFGIGQIVKAYVKRIPATENYNKNESLNIS 1094 Query: 721 LDEQPGETN 729 E +T+ Sbjct: 1095 TLENNNKTD 1103 >UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015551B3 Length = 613 Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 10/190 (5%) Query: 228 RGRNEGVLQLSLNAD-PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 R +LQ S+ + P M + L DS V +++ Sbjct: 429 RPELLKILQDSVEDSYKRLIHPLLCREFRWRPMGYTRPELLKILQDS-----VEDSYKRL 483 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 + L E + AE E+I +F RNL LL+ +P R MG+DPG + G K+A++ Sbjct: 484 IHPLLCREFRSKLTSEAEKESIMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLAIIS 543 Query: 347 ATGKLVATDTIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ-- 402 T +++ TD Y H+ G A+ + + L + V IGNGTA RETE ++ D+ Sbjct: 544 PTSQILHTDVAYLHSRQGNVARESEKIKRLLLNFSCSTVVIGNGTACRETEAYFADLIMR 603 Query: 403 KQFPKVTAQK 412 K F + Sbjct: 604 KYFAPLDVVY 613 >UniRef50_Q22BP0 Zinc knuckle family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22BP0_TETTH Length = 1504 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 97/665 (14%), Positives = 213/665 (32%), Gaps = 99/665 (14%) Query: 138 PEVAAAQYVYADKGVADTKAALDGAR---YILMERFAEDAALLAKVRDYLWKNAHLVSTV 194 P+ A + + V K A++ L L + + + + Sbjct: 466 PQAYADNLISENPNVPCMKEAIEALECMVDYLSNELFNYPPLKKWYYEMFKQKCLISTEP 525 Query: 195 VSGKEEEGAKFRDYFD----HHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPK 250 +++ F + H P ++ L + + + + + D Sbjct: 526 TDLGKKQIDMFHPLYPAKRIHKRPYTSFTDDTWLLLEEAERLNFITVKIFLKSENDNNSD 585 Query: 251 ESYCEQIIMDHLGLRLNNAPAD---------SWRKGVVSWTWRIKVLMHLETELMGTVRE 301 + I+ + + L N A +RK + L + ++ + + E Sbjct: 586 NNSIFDIMSKNYMISLKNLEAQIKQINSEWNFFRKYNIENVCDKFFLPYAQSLVRIELHE 645 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGL--DPGLRTGVKVAVVDATGKLVATDTI-- 357 AE ++ + ++++ P M + D R G V VD G + + Sbjct: 646 NAEKWVVSQCQQKFYNMINVEPQKNGKIMSVVQDTNGRIG--VVFVDENGIPNNSMILNY 703 Query: 358 YPHTGQAAKAAMTVAALCEKH---------NVELVAIGNGTASRETERFYLDVQKQFPKV 408 + + E+H +L+ + + E++R + +++ K Sbjct: 704 FTKKEDQLSTKARLEKTQEEHELEIKFKSFGPQLIVVAANSI--ESQRLKNLLHQKYEKS 761 Query: 409 TAQKVIVSEAGASVYSASELAAQE---FPDLDVSLRGAVSIARRLQDPLAELVKIDPK-- 463 + + + + D LR A+S R L +P AE++ + Sbjct: 762 QSYIQYGDDTIPQIVAKQPTIQGPGNTLQFKDSVLRVALSQGRILLNPTAEILSLWNDNV 821 Query: 464 ------SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT-----ASVPLLTRVAGL 512 I + Q +S +L L+ VN +GV+++ LL V GL Sbjct: 822 QQNGCLHIPLHPSQEYISLDKLQYSLEKCCVQIVNFMGVEMDMLQDQPHLKHLLQHVCGL 881 Query: 513 TRMMAQNIVAWRDENGQF--------QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLD 564 A ++ ++N + R L+ + F+ GF+R +P++ Sbjct: 882 GPRKALKLIELLEKNAVIFEKEKEVPKKRGLLITQLDIKDVVFKNINGFIRFRFSKDPIE 941 Query: 565 ASTVHPEAYPVVERILAAT-----------QQALKDLMGNSSELRNLKASDFTDEK---- 609 + ++ + Y + ++I + + ++ +M N + + D+ + Sbjct: 942 KTRINKDLYKIAKKICRDSADNFQIKSQSDEDIVEYVMKNPKYIDAMDLEDYAQQLEEMK 1001 Query: 610 ---FGVPTVTDIIKELEKPGRDPRPEFKTAQ-----FADGVETMNDLQPGMILEGAV--- 658 P + + EL P R ++ F E+ + GMI+ + Sbjct: 1002 NQPNMAPVLDFVKDELINPFSYKRNTYEAISDQDLFFKMIKESPQTFRKGMIVSAKIIQI 1061 Query: 659 -----TNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV---D 709 + V I + +S +K K GDI+K V ++ D Sbjct: 1062 RPKENQQIKQHQLLVKIVDNDLKSSILVSEEESKN-------YKVGDIIKAYVDQIFVLD 1114 Query: 710 LQRKR 714 +R + Sbjct: 1115 NKRSK 1119 >UniRef50_Q5BZL5 SJCHGC08220 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BZL5_SCHJA Length = 200 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 35/203 (17%) Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 +N+H + + + F++Y + P+S++ +H+ LA+ R GV+ + ++ PQ Sbjct: 1 QNSHSFLNSHNKSKNDLITFKNYLNFSRPVSSILAHQVLAINRASERGVITVKIHLSPQV 60 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 C + +N ++ W+ + HL + + A+D Sbjct: 61 QHN-----CATFVSQKYFSTVNRIHW-NFVMLAFDDAWKRLLDPHLVRSIRHKLTTSAQD 114 Query: 306 EAINVFARNLHDLLMAAPAGLR-----------------------------ATMGLDPGL 336 +++VF NL LLM AP +GLDPG Sbjct: 115 ASLDVFTENLRRLLMTAPLRNPFSLANDSIVNNDSDIGMISSASGAPGDRLPVVGLDPGW 174 Query: 337 RTGVKVAVVDATGKLVATDTIYP 359 G K A D G ++ T ++P Sbjct: 175 CNGCKWAACDPHGNVLGTGILWP 197 >UniRef50_A8J804 Glycine rich protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J804_CHLRE Length = 1032 Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats. Identities = 122/659 (18%), Positives = 206/659 (31%), Gaps = 119/659 (18%) Query: 123 LEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 LEP A L + V A + + D A GA L R E+ + + + Sbjct: 215 LEPSAFLANLQEAGHAGVGANEPRTPPGAILDWAA---GALESLKARHPENPIISSYSPE 271 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTV-PSHRALAMFRGRNEGVLQL 237 L A + + E F Y + L+ S L + E + L Sbjct: 272 SLVSAAVVSAEATEAGEAVLDPFHKYALATRLRKKRLADFGSSDLFLRLDEAARERLASL 331 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 L+ + E E G + R+ VV ++L Sbjct: 332 RLHLESAAAEKLVNDVAELFQSSDRGAVAQQ--WNGLRRDVVKAALEEQLLPAFRAHFHA 389 Query: 298 TVRERAEDEAINVFARNLHDLLMAAP------AGLRATMGLDPGLRTGVKVAVVDATGKL 351 + A + A+ L D +A+P G + + G V ++ G L Sbjct: 390 KLLAEAREHALR-----LEDEFLASPRLCIVCYGNQE-LNPATGQPNNTAVVFLNELGNL 443 Query: 352 VAT-----------------DTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGT-ASRE 393 ++ ++ AA L E H V +G A R+ Sbjct: 444 TDFFFAGQLSGQIRRSGQGAGAVFTDPAKSKDAARIREKLLE-HLPHAVLVGIAAPACRQ 502 Query: 394 TER-----------FYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRG 442 + D + E A+++ S E + +R Sbjct: 503 LHEDMRNIVDSLLEHHADALIDHETRGITVFPMDEKLAALWEVSAAGRSELREHAPLVRR 562 Query: 443 AVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVD 497 AV + R DPL+ L + + S+GV Q + + + V+ VGVD Sbjct: 563 AVGLGRSALDPLSLLAALCGPDKEVLSLGVYDMQDALGKDDRMAAVTRVMVTAGAQVGVD 622 Query: 498 LNTAS-----VPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQL-LKVSRLGPKAFEQC 550 +N A LL V GL A ++A N + ++R L + LG F C Sbjct: 623 VNLACNVAWRSELLQFVPGLGPRKAGALLAALQRNRNKAESRSMLYKDLGVLGKVVFRNC 682 Query: 551 AGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKF 610 +LRI E++ + E+ ++ K L Sbjct: 683 GAYLRI--------------ESFDL-EKFMSDAAAEGKPLP------------------V 709 Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 G+PT+ DI+ EL P + RP ++ T L+ + N Sbjct: 710 GLPTLIDIVAELVCPAMELRPAWQEISPRQVKITYVT---RDCLKVILIN---------- 756 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIV-KVKVLEVDLQRKRIALTMRLDEQPGET 728 +G+V +S + V + ++ V R RI +R++EQP ++ Sbjct: 757 -SGTEGMVPAEEVSGSYTGRVGG--PEWQAVMQSRLNSV--ARGRI---IRIEEQPDQS 807 >UniRef50_B0EV07 Transcription elongation factor spt6, putative n=2 Tax=Entamoeba RepID=B0EV07_ENTDI Length = 1230 Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats. Identities = 134/774 (17%), Positives = 264/774 (34%), Gaps = 127/774 (16%) Query: 35 PFIAR-YRK-EITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAI- 91 P+I+R Y K + LD L + + ++ + + + E + +A+ Sbjct: 241 PYISRDYSKIDSYQVLD--MLWMIWNFDEEYSIFCKEKEKVKEGLKE----IPEERRALY 294 Query: 92 -NATLSKTELEDL---------------YLPYKP--KRRTRGQIAIEA---------GL- 123 S EL DL + P K K + Q+ I+ GL Sbjct: 295 SVELDSVVELPDLKLISDDFLLRYGKDQFDPLKQISKGKKSYQVLIQKNFKEMLDGFGLT 354 Query: 124 -EPLADLLWSD-----PSHTPEV-AAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 + LA + S+ P PE+ A + + K + GA+ I FA + + Sbjct: 355 ADELAQNIKSNFKKTIPKMCPEIPQAIAARMVNPEFPEPKNIMSGAKMIFATEFAYNWYV 414 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHR-ALAMFRGRN 231 + K+A L + +E F Y +P+ + L +F N Sbjct: 415 RKFFFEEGLKDAELSTDPTQKGDEVINVFHKYAIIKRLRRKPIGLIRGKTDILNIFNAVN 474 Query: 232 EGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHL 291 EG+L +++ E L + ++K + + ++ + ++ Sbjct: 475 EGLLTMTIEIPQNIIEN---------ASTLLVGGDDLEEWRKYKKETLEFAFKYFITPYV 525 Query: 292 ETELMGTVRERAEDEAINVFARNLHDLLMAA----------------PAGLRATMGL--D 333 +L +R+ A D I+ NL + A + G+ Sbjct: 526 VEQLKIELRKEAVDCLIHEAQYNLKRRIDVAQHFALGKYSKDISNISTLEKKFVGGIVFS 585 Query: 334 PGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE 393 GVKV + TG+ + +T + + + + + +G Sbjct: 586 KEGMMGVKVNAM--TGEFIEGKYFGKNTSKYGEYEEELKKF---FGRDTLVVG---IEAN 637 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 T+R+ + V +++ +Y + E +L+ + R+L +P Sbjct: 638 TQRYVSVTATMKNNSDIECVGINKDLGRIYK--KETKGELSELEF---AGACVCRQLINP 692 Query: 454 LAELVKI-----DPKSIGVGQYQHDVS---QTQLARKLDAVVEDCVNAVGVDLNTA---- 501 +AE V I SI + Q+ ++ Q ++ L+ + +N+ GVD+N Sbjct: 693 IAEFVHICCTKEKMLSIKLHWLQNTLNESEQNKMFSALNETLITIINSKGVDINQCIEYP 752 Query: 502 -SVPLLTRVAGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGP--KAFEQCAGFLRIN 557 +L V GL + + I + R + + +R+ L + + + C GF+ I+ Sbjct: 753 HMEKMLDYVNGLGPIRSDYIFSHFRQYDFKVTSRKFLNETFKTDKLETVVDNCIGFIIIS 812 Query: 558 HGDNP----LDASTVHPEAYPVVERILAAT---QQALKDLMGNSSELRNLKASDFTDEKF 610 + LD + +H Y + E I+ ++ + D L + E + Sbjct: 813 PKYSSKNLYLDQTRIHFSRYGLAETIVDDAFTGKRPIDDFTKKVMVLTREDYNRLDLEGY 872 Query: 611 GVPT----------VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 G + DI+ EL +P + + A D E + I E Sbjct: 873 GKENEEKGHSIYICIMDIVNELIEPFKYQQASLAEAMMKDE-EIFESVTNSSIQEFKKNQ 931 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV--VKAGDIVKVKVLEVDLQR 712 + F + G IS +ED + V++G + K++ VD + Sbjct: 932 LIEFVLKPGSRERKKGY--ISEDLEVSIEDSINLNGVESGTTITGKIMTVDYGK 983 >UniRef50_A7AMH1 Putative uncharacterized protein n=1 Tax=Babesia bovis RepID=A7AMH1_BABBO Length = 1722 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 88/483 (18%), Positives = 171/483 (35%), Gaps = 69/483 (14%) Query: 230 RNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN-APADSWRKGVVSWTWRIKVL 288 E +L L + D+ + + +Q+ + + + + ++ ++ ++++ Sbjct: 884 EKEEML---LKDSEERDKHWRRNLVDQLAIAYCPSNVPTYSIWRHIQRDILGRLLNVELI 940 Query: 289 MHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGL---DPGLRTGVKVAVV 345 E+ ++ A+ + R L L AP + + +PG V VV Sbjct: 941 PKFRMEIRDELQRNAQTWVLLHSQRMLQYKLDIAPGNRDNILTMAVEEPGNV--VHAVVV 998 Query: 346 DATGKLVATDTIYPHTGQAAKAAM----------------TVAALCEKHNVELVAIG-NG 388 + G+ ++ G V L + V IG Sbjct: 999 NEFGEHKDYKRLHNLVGNQVSTRNCTPSNPLFKEIMVDIDLVIDLINTYRVSEALIGMAN 1058 Query: 389 TASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIAR 448 TA T V + + + DL VS+ R Sbjct: 1059 TAGMLLYHRLSVYMLPHINGTLHLKKVDIEVPRL-RRGMIKDGSYLDL------CVSMGR 1111 Query: 449 RLQDPLAELVKIDPKS-------IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA 501 DP++E + + + + QH +SQ +L L+A + V GVD+N Sbjct: 1112 FYMDPVSETINLWNNKGNNLLLKLSLHPLQHLISQEKLQEYLEATLIQVVCDCGVDINRI 1171 Query: 502 SVP-----LLTRVAGLTRMMA-----QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCA 551 L VAGL A Q +A GQ ++ + LG F CA Sbjct: 1172 RTSKHMEATLQFVAGLGPRKAIDVLRQLKIATIGTRGQLRSGN--ASLRGLGDLVFYNCA 1229 Query: 552 GFLRINHGD--NPLDASTVHP-EAYPVVERILAAT-------QQALKDLMGNSSELRNLK 601 F+RIN + + LD + +HP E Y E++ + ++A++++ + +L +L Sbjct: 1230 SFIRINQNEAMDILDTTRLHPAECYYTAEKLCTDSVDDELNGEEAIQEIFNHPDKLDDLD 1289 Query: 602 ASDFTD---EKFGVPT----VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 ++ EK +P + + +EL+ P RD R + + ++P ++ Sbjct: 1290 LEAYSGLLLEKRNMPRMLPYLLFVKRELQAPFRDYRATLQDLKRDQEFCLALQIEPRLLR 1349 Query: 655 EGA 657 +G+ Sbjct: 1350 KGS 1352 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 53/164 (32%), Positives = 82/164 (50%) Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 SE+ + + + D V I L+ K Q E + + G +L Sbjct: 260 SEISHDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVL 319 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG V V +FGAFV+I +GLVH+S +SNK +E+P V+K+GD V+VKVL++ +R Sbjct: 320 EGTVKRVKDFGAFVEILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEER 379 Query: 715 IALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 I+L+M+ E+ E RRG + + A K + A G+ Sbjct: 380 ISLSMKALEEKPEREDRRGNDGSASRADIAAYKQQDDSAATLGD 423 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 2/94 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 + L G ++EG V +T+FGAFVD+G DGLVH+S +S+ V++P V+ GD V V Sbjct: 224 VFSKLSVGEVVEGTVARLTDFGAFVDLG-GVDGLVHVSEISHDRVKNPADVLTKGDKVDV 282 Query: 704 KVLEVDLQRKRIALTMRLDEQ-PGETNARRGGGN 736 K+L +D ++ RI+L+++ ++ P + A + Sbjct: 283 KILALDTEKGRISLSIKATQRGPWDEAADQIAAG 316 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 19/168 (11%) Query: 553 FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 L I++ + + + E L D + + + S+ T +K GV Sbjct: 62 LLAIDNDNQAVVGLSTGEEGVVPAREYSDDRNINLADELKIGDTIEAVVISNVTSDKEGV 121 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 + L K D R ++ FA+ G ++ V N G VD+ Sbjct: 122 AYL------LSKKRLDARKAWENLSFAE----------GDTVDAKVINAVRGGLIVDV-N 164 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G V S ++ +FV D + +K +V+E+D R+ L+ + Sbjct: 165 GVRGFVPASMVAERFVSDLNQF--KNKDIKAQVIEIDPANARLILSRK 210 Score = 44.2 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 646 NDLQPGMILEGAVTNV-TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + ++ G ++ G + + + A V + ++G+V S+ + +K GD ++ Sbjct: 50 DQIKVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDDRNINLADELKIGDTIEAV 109 Query: 705 VLE 707 V+ Sbjct: 110 VIS 112 >UniRef50_Q7JQ89 CnjB protein n=3 Tax=Tetrahymena thermophila RepID=Q7JQ89_TETTH Length = 1748 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 74/591 (12%), Positives = 197/591 (33%), Gaps = 83/591 (14%) Query: 50 DTQLRNLETRLS-YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTE-----LEDL 103 + Q R + L +L ++ + R+ + I + + + + E + DL Sbjct: 338 EIQARKVSDLLQSHLTKINQAREYNIPQI---------IYQYFDDSSCCAEMLFPKITDL 388 Query: 104 YLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAAL---D 160 PYK + + + + L + E ++Y + + L + Sbjct: 389 -APYKEEYEAKFNPIRQQ----ASQKLINQMEIYNEENLLSHIYQNYTQLSQQERLNLSE 443 Query: 161 GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDH-------HE 213 + + F + + + D K A L ++ + F Y + + Sbjct: 444 LIQDYICIDFLYNPIIKKFIIDNYMKYAVLSTS----PQAHVIGFNIYHEFFAAKKIIKK 499 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS 273 PLS + S+ L + + + +++ + Q D+ Y E L + +S Sbjct: 500 PLSEITSNEFLTILQASQQNLIECKILLPWQIDQGEDLIYREISQHFQPHLASKSESLNS 559 Query: 274 WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA--------- 324 + + ++ + + + + ++ + ++ E ++ + + P Sbjct: 560 YTQNLLQRLLKNYLYPYAQQQVYKHLENKSLTEVRDICVSKFKEYISYGPYLIRDRQDQL 619 Query: 325 -GLRATMGLDPGLRTG-VKVAVVDATGKLVATDTI--YPHTGQ-----AAKAAMTVAALC 375 + +G V V+++ GK + + + Y + + + + Sbjct: 620 VKPETILSFYVHESSGIVGVSMISQDGKEIHKNCLEYYFNADKLVSQKREQEIKNLYEFI 679 Query: 376 EKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASE-------- 427 ++ + + ++ QF + ++ + + Y Sbjct: 680 RNRQPYVIIVSSN--CSRALVLKSNLYIQFKNLCRNILMCEQTLMTCYLNQSSFIQSPKD 737 Query: 428 ----LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 LA ++ L S+ +PL E I + +Q V + +L + Sbjct: 738 KYIFLARKQAKAFQFRLLEVCSLWNYESNPLLE--------IKLHPFQKKVDKKELQIRF 789 Query: 484 DAVVEDCVNAVGV------DLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQ---NRQ 534 + V+++ + G+ D N + L + G + ++ ++ F+ +R+ Sbjct: 790 EQVIQERICQDGLEFKTLFDKNLSFKDCLQFIPGFGPRKSHFFISQFEQGKDFKEITSRK 849 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQ 585 + ++++ +G C F+ + DN LD + + Y +V I+ + Sbjct: 850 KCIQLNLMGENLIVNCMAFMMFSKSDNLLDQTKIPYNQYFIVNHIVETIDK 900 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 59/221 (26%), Positives = 92/221 (41%), Gaps = 11/221 (4%) Query: 520 IVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 +V+ + NG+ +R+ L + E F R + L + E Y V Sbjct: 160 LVSRVEANGRNIVVSRRALKDKEQ-----AESLHEFSRNYKPGDVLQGTVTRVEPYGVFV 214 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + + S R+L + V I+E +K K AQ Sbjct: 215 EVAPGLEGLV--HISEMSWSRSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMKQAQ 272 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + +PG ++EG VT V FGAFV+I +GLVH+S +S K V P V+ Sbjct: 273 ADPWESITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHVSEMSYLKRVSKPEEEVQ 332 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGN 736 G V+VKV +D +RI+L+MR + P E + R Sbjct: 333 PGQKVRVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKG 373 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 8/124 (6%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDL----QPGMILEGAVTNVTNFGAFV 668 ++T ++ +E GR+ + + + E++++ +PG +L+G VT V +G FV Sbjct: 155 ESMTFLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKPGDVLQGTVTRVEPYGVFV 214 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIALTMRLDE-Q 724 ++ +GLVHIS +S P +V GD V V +L ++ + K RI L+M+ + Sbjct: 215 EVAPGLEGLVHISEMSWSRSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMKQAQAD 274 Query: 725 PGET 728 P E+ Sbjct: 275 PWES 278 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 48/132 (36%), Gaps = 1/132 (0%) Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 L+ L+ S + S +E V +K ++ R + AQ Sbjct: 308 GLEGLVHVSEMSYLKRVSKPEEEVQPGQKVRVKVKGIDSLERRISLSMRDAQGDPWEGVS 367 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + G ++EG + +FG V + GLV S L K GD V V V Sbjct: 368 TRYEKGTLVEGKMEKQEDFGMLVALEPGVVGLVPRSILHQNQDSSLTNK-KPGDRVNVAV 426 Query: 706 LEVDLQRKRIAL 717 VD +RI+L Sbjct: 427 ESVDEANRRISL 438 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 58/116 (50%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 +++ K AQ V + G +G VTN+ +FGAFV+I +GL+HI Sbjct: 267 IDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHIG 326 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 LS V+ P V+K G V+V +LEVD R+RI L ++ P + + ++ Sbjct: 327 DLSWSRVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLNDPWANVSEKYSKDQ 382 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 1/111 (0%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V +I E++ R K ++ V + +FGAFV+I Sbjct: 346 VEVVILEVDGDRRRIGLGLKQLN-DPWANVSEKYSKDQVVTVKVVRLADFGAFVEIEDGV 404 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 +GL+HIS LS + VE P V++ G V+ K+LEV+ KRI L++R E+P Sbjct: 405 EGLIHISQLSRQRVEKPSDVLREGQEVQAKILEVNPSEKRIRLSLRALEEP 455 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 2/100 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E ++ G ILEG V+++T+FG FV++G +GLVHI+ LS + +V+ GD VK Sbjct: 203 EFYANVHEGDILEGEVSSITSFGVFVNLGA-MEGLVHITELSWQRGAKAKDLVQKGDKVK 261 Query: 703 VKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQN 741 VKV+ +D + R++L+++ E P R +R + Sbjct: 262 VKVIGIDRENNRVSLSLKQAQEDPWVGVTSRWTVGQRTKG 301 Score = 43.8 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 4/99 (4%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 + G + ++++N + G ++EG V + G VD+G +G + Sbjct: 7 MNNSGVSEPEPETMESIMEQIDSVN-IHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRR 65 Query: 682 SLSNK-FVEDPHTVVKAGDIVKVKVLEVDL-QRKRIALT 718 S++ VE + GD ++V+V V + ++ L+ Sbjct: 66 EWSHRAIVEKVGEP-QVGDRIRVQVTNVGQGEEAQLNLS 103 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 DL PGM LEG VT++ +G FVDIGV +DGLVHIS +S+ +E P +VK GD VKV+V Sbjct: 137 KDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRV 196 Query: 706 LEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP--AGNSAMMD 763 V+ +RI+LTMR E+ E + RG + AA G + G + Sbjct: 197 KSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGV 256 Query: 764 ALAAAMGK 771 + +GK Sbjct: 257 FVDIGVGK 264 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 6/134 (4%) Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 + +E R KA D T T + E++ G + AQ + L+ Sbjct: 269 HVSELAEGRVEKAEDVVQVG---QTYTFKVLEVDAAGARISLSLRRAQRGQKL---QQLE 322 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G ILEG ++ + FGAFVDIGV +DGLVHIS LSN V VVK GD V+V+VL+VD Sbjct: 323 KGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVGDRVQVRVLDVD 382 Query: 710 LQRKRIALTMRLDE 723 Q KRI+L++RL++ Sbjct: 383 PQSKRISLSLRLED 396 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 39/98 (39%), Positives = 54/98 (55%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 ++ +PR + E + L+ G +EG VT + FG FVDIGV +DGLVH+S Sbjct: 213 KERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSE 272 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 L+ VE VV+ G KVLEVD RI+L++R Sbjct: 273 LAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLR 310 >UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7U3_9FIRM Length = 666 Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats. Identities = 50/237 (21%), Positives = 96/237 (40%), Gaps = 15/237 (6%) Query: 512 LTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQ-----CAGFLRINHGDNPLDA 565 L + + IV + + +N +R+ LL+ + KA E+ L I Sbjct: 425 LGKEIECRIVEFDKQKNKIIVSRKILLEEAYKERKAKEKELKEAAIAALEIGKEVEA--- 481 Query: 566 STVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKP 625 + D + S++ + + D +V I+ EL+K Sbjct: 482 ------PIKNITNFGMFIDLNGVDGFIHISDIAWKRVGNINDLYKVGDSVKAIVTELDKD 535 Query: 626 GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 + K E + + G ++ + N TNFGAF +I +GL+HIS LS+ Sbjct: 536 NYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNFGAFAEIIPDVEGLIHISQLSH 595 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 V + VK GD V VK+++++ +++++L+++ P + R + +N Sbjct: 596 DRVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETMDPPKRKIERNKLYHKEDSN 652 Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 55/114 (48%), Gaps = 4/114 (3%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 G T T +I+E+ + + + + +++ G I+EG + V + ++I Sbjct: 258 GASTPTQLIEEVINTMDNNMVDSFEKNIEESI---KEIREGDIVEGEIVMVDHNEVTMNI 314 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT-MRLDE 723 G DG+V + +ED + GD VKV V++++ ++L+ +++DE Sbjct: 315 GYKSDGIVKKADFLYDLMEDLTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDE 368 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 107/270 (39%), Gaps = 28/270 (10%) Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNR-----QQLLKVSRLGPKAFEQCAGFLRINHGDN 561 V+ L + + + E +NR + L++ R +AF++ A L + + Sbjct: 145 RYVSDLKPYIGKTMKLKITEIDPNKNRLILSHKDLIEEER--EEAFDKVASQLVV---GD 199 Query: 562 PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKE 621 ++ + A D + + SE+ +D V + Sbjct: 200 VIEGKV------SRLTNFGAFIDVGGVDGLVHISEISYKHVDKPSDVLKAGQDVKVKVIG 253 Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++ K + + + DL G + EG V ++TNFGAFV++ GLVH+S Sbjct: 254 IDDDRHRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVS 313 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQN 741 +SNK V+ P V+K VKVKVL +D +RI+L+++ + N + Sbjct: 314 EISNKHVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAAD-----------SNASSSD 362 Query: 742 NRPAAKPRGREAQPAGNSAMMD-ALAAAMG 770 N + R R N M D A+G Sbjct: 363 NHSSRPRRSRNENSVNNKYMGDNDNGFALG 392 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 D + G +EG VT+ G VD+G G + S +SN++V D G +K+K Sbjct: 106 QKDFEEGNAIEGTVTSSVRGGLLVDVGTR--GFLPASLISNRYVSDLKPY--IGKTMKLK 161 Query: 705 VLEVDLQRKRIALTMR--LDEQPGETNAR 731 + E+D + R+ L+ + ++E+ E + Sbjct: 162 ITEIDPNKNRLILSHKDLIEEEREEAFDK 190 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 2/130 (1%) Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 + T DGVE L G ++EG V +T+FG FV++ DGLVHIS +S+K VE+P Sbjct: 279 KATTPGPWDGVE--QKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRVENP 336 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGR 751 V+ G V VKVLEV+ +R++L+++ E+ + + RP + + Sbjct: 337 KDVLSVGQDVTVKVLEVNADAERVSLSIKALEERPANAEGENNEKRQSRPRRPKRQEKRD 396 Query: 752 EAQPAGNSAM 761 P S Sbjct: 397 YELPETQSGF 406 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 13/148 (8%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----------ETMNDLQP 650 + D +F T + +E + ++ P + E + L+ Sbjct: 151 PASMIDTRFVRNTEQFVGQEFDAKIKEVDPAENRFILSRREVVEAEAIEARKEVFSKLEV 210 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ G V +T+FGAF+D+G DGLVH++ LS++ P +VV GD ++VKVL +D Sbjct: 211 GSVVTGKVARLTSFGAFIDLG-GVDGLVHVTELSHERNVSPKSVVSVGDEIEVKVLAIDE 269 Query: 711 QRKRIALTMRL-DEQPGETNARRGGGNE 737 + R++L+++ P + ++ + Sbjct: 270 EAGRVSLSLKATTPGPWDGVEQKLAAGD 297 Score = 43.4 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 5/152 (3%) Query: 584 QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 ++ ++ + A+ K G +++++ D + + + + Sbjct: 55 GTGIEGVLTRRELTNDRDANVADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARK 114 Query: 644 TMNDL--QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + L + ++ T G V+ G + S + +FV + V G Sbjct: 115 AWDKLVGREEEVVTVKGTRAVKGGLSVEFE-GLRGFIPASMIDTRFVRNTEQFV--GQEF 171 Query: 702 KVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 K+ EVD R L+ R + AR+ Sbjct: 172 DAKIKEVDPAENRFILSRREVVEAEAIEARKE 203 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 5/172 (2%) Query: 575 VVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DPRP 631 V R+ + ++ D G P +IK +K G + Sbjct: 196 VAGRVKGGLTVDIGIKAFLPGSQLEIRPVRNLDAYIGQPIEVRVIKLNKKRGNVVVSRKE 255 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 + Q A ET+ L+ G IL G V N+T++GAFVD+G DGL+HI+ +S + P Sbjct: 256 ILEEEQTAKRSETLEHLEEGSILTGTVKNLTDYGAFVDMG-GIDGLLHITDMSWGRLTHP 314 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 +V GD ++VKVL+ D ++R++L + L P R R + Sbjct: 315 RDLVNVGDEIQVKVLKFDRDKQRVSLGFKQLTPDPWLDATERYPVGARVRGR 366 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 2/125 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + R K Q + G +EG V N+T+FGAF++I Sbjct: 411 VETVVLSVNPTDRRISLGMKQLQDNPWETLGDKYPTGATVEGRVRNLTDFGAFIEIEDGI 470 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 DGLVH+S+LS K V+ P V+K G+ V+ VL V+ + +R++L ++ L ET + Sbjct: 471 DGLVHVSNLSWTKRVKHPSEVLKKGEKVRAVVLGVEPENRRLSLGIKQLQPDVWETFFEQ 530 Query: 733 GGGNE 737 + Sbjct: 531 HRTGD 535 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 85/215 (39%), Gaps = 13/215 (6%) Query: 520 IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI 579 I + +R+++L+ + + + L + L + + Y + Sbjct: 240 IKLNKKRGNVVVSRKEILEEEQTAKR-----SETLEHLEEGSILTGTVKNLTDYGAFVDM 294 Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 M + DE + + + ++ + FK Sbjct: 295 GGIDGLLHITDMSWGRLTHPRDLVNVGDE------IQVKVLKFDRDKQRVSLGFKQLTPD 348 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAG 698 ++ G + G V +VT++G+FV++ +GLVH+S ++ K ++ P ++K G Sbjct: 349 PWLDATERYPVGARVRGRVLSVTDYGSFVELEQGIEGLVHVSEMTWSKRMKHPSKMLKPG 408 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 D V+ VL V+ +RI+L M+ L + P ET + Sbjct: 409 DEVETVVLSVNPTDRRISLGMKQLQDNPWETLGDK 443 Score = 73.1 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ +E R K Q + G ++ G V FGAF++I Sbjct: 498 VRAVVLGVEPENRRLSLGIKQLQPDVWETFFEQHRTGDVVHGKVLRTAQFGAFIEIAEGV 557 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GL H+S +++ + ++ G K+++++ K++ L++R Sbjct: 558 EGLCHVSEATDQHGAPVN--LEQGQEYDFKIIKMNPDEKKVGLSLR 601 Score = 42.3 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 46/129 (35%), Gaps = 4/129 (3%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV +I+ E G K + + G V G VDIG+ Sbjct: 152 TVEVVIEREEAEGGFLLSYEKALRLRVWDTIEKAANEKTPVTGIVAGRVKGGLTVDIGIK 211 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 + S L + V + G ++V+V++++ +R + ++ + + +T R Sbjct: 212 --AFLPGSQLEIRPVRNLDAY--IGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKRSE 267 Query: 734 GGNERPQNN 742 + + Sbjct: 268 TLEHLEEGS 276 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 12/210 (5%) Query: 512 LTRMMAQNIVAWRDENGQ-FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + + I+ G+ +R+Q+L+ R + F + L+ + Sbjct: 187 VGQKIRVKIIELDPYKGRVILSRKQVLEAERTAAR-----ERFWSTVQEGDVLEGT---V 238 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 ++ + + S R S E + + L++ Sbjct: 239 KSITDFGAFIDLGGVDGLLHISEMSYGRIKHPSQVVSEG---ERIKVKVLRLDREKGKVS 295 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K G I+EG V +T FGAFV++ DGL+HIS ++++ + + Sbjct: 296 LGLKQVLPDPWDSVEEKYPEGAIVEGTVARLTTFGAFVELEPGVDGLIHISQMADRRINN 355 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 P VV GD+VKVKV+ VD Q +RI+L++R Sbjct: 356 PGEVVSIGDVVKVKVINVDAQNRRISLSLR 385 Score = 63.1 bits (152), Expect = 5e-08, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 6/121 (4%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDL-QPGMILEGAVTNVTNFGAFVDIGVHQDG 676 I++E + GR + A+ +E + +PG I+ G V V++ VD+G +G Sbjct: 22 IVQEFDTQGRKNVETMEEAEARAELEAALRVPKPGDIVRGQVVRVSDDSIMVDVGYKSEG 81 Query: 677 LVHISSLSNKFVEDPHTV-VKAGDIVKVKVLEVDLQRK---RIALTMRLDEQPGETNARR 732 ++ ++ LS++ + H +K GD V+V VL VD + + RI+ R DEQ R Sbjct: 82 IIPLNELSHRPLRSAHDAGLKVGDEVQVVVLSVDTKGEGGLRIS-KRRADEQLAWAEVER 140 Query: 733 G 733 Sbjct: 141 K 141 Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 E + G ++E VT G VD+G + S + +V D V G Sbjct: 135 WAEVERKFEAGEVIEAEVTEAVKGGLVVDLG--LRAFLPASQVDRGYVADLSKFV--GQK 190 Query: 701 VKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 ++VK++E+D + R+ L+ + + T AR Sbjct: 191 IRVKIIELDPYKGRVILSRKQVLEAERTAARE 222 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 2/94 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 +LQ G L+G V N+T++GAFVD+G DGL+HI+ ++ K V+ P VV+ GD + VKV Sbjct: 111 ENLQEGQELKGVVKNLTDYGAFVDLG-GIDGLLHITDMAWKRVKHPSDVVQIGDEITVKV 169 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 L+ D +R R++L ++ + + P ARR + R Sbjct: 170 LKFDRERNRVSLGLKQMGDDPWVALARRYPESTR 203 Score = 53.8 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 24/54 (44%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 V L G VTN+ ++G FV+I +GLVH+S + E P Sbjct: 189 DPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPS 242 >UniRef50_B7FU58 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU58_PHATR Length = 284 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 71/276 (25%), Positives = 121/276 (43%), Gaps = 52/276 (18%) Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-SVPLLTRVAGLTRMMAQNIVAWRDEN 527 +Y + K A + D ++ DLN +VPL T M I++ DEN Sbjct: 33 EYSGSGCLVDIGAKASAYLPDQEASLDQDLNIEDAVPLDTP-------MEFQIISEEDEN 85 Query: 528 GQFQNRQQLLKVSRLG-PKAFEQCAGFLRINHGDNPLDASTVHPE---AYPVVERILAAT 583 GQ L+ + R+ KA+E+ L + D L+A + A +VE + A Sbjct: 86 GQL-----LVSIKRIEYKKAWEKV---LSMAEEDQILEAKVIAVNRGGAICLVEGLRAFL 137 Query: 584 -------QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 Q +DL+GN+ +L+ L+ + T+ K V ++++ Sbjct: 138 PGSHLTGQLPDEDLIGNNLQLKFLEVNQETN-KLVVSNRKAVVEQ--------------- 181 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 M DL G ++ G V + +GAFV++G GL+HIS +S ++D V++ Sbjct: 182 -------QMADLSRGDLVAGMVKALKPYGAFVEVG-GMSGLLHISQISYDRIDDLEKVLQ 233 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 G VK +++ D RIAL+ + L+ +PG+ Sbjct: 234 PGMQVKCMIIDHDKVNGRIALSTKTLEPEPGDMLKD 269 >UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHL8_PLALI Length = 557 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 34/140 (24%), Positives = 63/140 (45%) Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 TV ++ L++ + + G + G VT +T+FGAF+++ Sbjct: 395 QQTVDVVVLSLDREKQKIGLGMRQLVQNPWNSAPETYAVGKTVTGKVTRITDFGAFIELE 454 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNAR 731 +G++HIS L K V+ V+K G V +VLE+ +R+RI+L+++ + E A Sbjct: 455 PGVEGMIHISELDYKRVKRVADVLKEGQQVDAQVLEIQPERQRISLSVKALKPKPEVVAP 514 Query: 732 RGGGNERPQNNRPAAKPRGR 751 + P + + R Sbjct: 515 PKDEDLAPGKGQQYERKRKE 534 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + ++ G G + + ++GAFVD+G DG +H+ +S ++ P V+ V V Sbjct: 343 WDKVEVGQKFTGTIKTIKDYGAFVDLG-GVDGFLHVGEMSWTRIKHPTDCVREQQTVDVV 401 Query: 705 VLEVDLQRKRIALTMR-LDEQPGETNAR 731 VL +D ++++I L MR L + P + Sbjct: 402 VLSLDREKQKIGLGMRQLVQNPWNSAPE 429 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 2/84 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + LQPGMI+EG ++N+ +FGAFVD+ DGL+HIS LS V P ++ GD V VKV Sbjct: 209 DRLQPGMIVEGTISNIVDFGAFVDLD-GIDGLIHISELSWSHVNHPSEILSIGDTVSVKV 267 Query: 706 LEVDLQRKRIALTMRL-DEQPGET 728 L++D R+RI+L ++ E P + Sbjct: 268 LDIDRDRQRISLGLKQTQEDPWQR 291 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 39/110 (35%), Positives = 64/110 (58%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV+ + ++++ + K Q ++ G LEG VT V FGAFV+I Sbjct: 262 TVSVKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDG 321 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +GLVHIS L+ VE+P +++ D VKVK+LE+D +R+R++L+++ E Sbjct: 322 VEGLVHISELAQHHVENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 35/73 (47%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G ++ G V + VDIG +G++ + LS + DP V+ G+ V VL Sbjct: 38 FEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALVLT 97 Query: 708 VDLQRKRIALTMR 720 + Q R+ L+ + Sbjct: 98 KEDQDGRLILSKK 110 Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 52/143 (36%), Gaps = 4/143 (2%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 +L + ++ ++ + + G ++ + ++ GR + + Sbjct: 55 EVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDALVLTKEDQDGRLILSKKRARF 114 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 + G ++G V V G +D+G G + S + + V + Sbjct: 115 EKAWRRIEAAAESGEPVDGTVIEVVKGGLIIDLG--VRGFLPASLVDIRRVPHLDEYL-- 170 Query: 698 GDIVKVKVLEVDLQRKRIALTMR 720 G ++ +V+E++ R + L+ R Sbjct: 171 GQTIECRVIELNRSRNNVVLSRR 193 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 2/95 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E +QPG +EG V +TNFGAFVD+G DGLVH+S +S V+ P V+K G +K Sbjct: 195 EIFAKIQPGDTVEGKVARLTNFGAFVDLG-GVDGLVHVSEISFDHVDKPSDVLKVGQEIK 253 Query: 703 VKVLEVDLQRKRIALTMRLD-EQPGETNARRGGGN 736 VKVL VD R RI+L+++ QP + + Sbjct: 254 VKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAG 288 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%) Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV 695 Q D +E G +L G V +T FGAFV++ +GLVHIS +S++ V P V+ Sbjct: 275 PQPWDDIE--EKAPAGSVLTGTVKRLTTFGAFVEVFPGVEGLVHISQISHEHVATPADVL 332 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 K G V+VKVL VD R+AL+++ L E+P + G ++N Sbjct: 333 KEGQEVQVKVLSVDPDAHRLALSIKALQERPAGSEEESHEGGNSSRDN 380 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNK 686 D T AD ++++ ++ G ++ V V + V I G +G+V I LS + Sbjct: 3 DNNVNENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQ 62 Query: 687 FVEDPHTVVKAGDIVKVKVLEV---DLQRKRIALTMRLDE 723 ++D H V K GD + + VL D + + L+ R E Sbjct: 63 PIDDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLE 102 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 4/91 (4%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + G + VT+V G V+ G V S + + FVED G ++ Sbjct: 109 EIQAKYEAGETITAPVTSVVKGGLVVN--AGVRGFVPASMVEDHFVEDLSQY--KGKELE 164 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 K++E++ R+ L+ R + + AR+ Sbjct: 165 FKIIEIEPSENRLILSHRAIVEASKAEARKE 195 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 37/120 (30%), Positives = 66/120 (55%), Gaps = 2/120 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ + E+ + K + + N G ++EG V ++TN+GAFV+I Sbjct: 413 LEVVVLDYEEERQRISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGI 472 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GLVHIS +S + +E P +V G +V VK+L +D + ++I+L M+ L+ P E + R Sbjct: 473 EGLVHISEMSWTRHIEHPSQMVSLGQVVDVKILNIDQEERKISLGMKQLEPDPWEGISDR 532 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 29/195 (14%) Query: 556 INHGDNPLDASTVH-------PEAYPVVERILAATQQALKDLMG-----NSSELRNLKAS 603 I + ++ + + E + +E L +Q ++ + + + Sbjct: 272 IYENEEVIEGTIIRRIKGGMIVELFDGMEAFLPGSQIDVRPVRDFESYLETRMEFKIVKL 331 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 + +E V I ELE E + L+ G +LEG V N+ + Sbjct: 332 NPENENIVVSHRELIEHELE---------------EQRQEILEQLEVGQVLEGTVKNIVD 376 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LD 722 FG F+D+G DGL+HI+ LS V P VV+ ++V VL+ + +R+RI+L ++ L Sbjct: 377 FGVFIDLG-GVDGLLHITDLSWGRVSHPSEVVELDQELEVVVLDYEEERQRISLGLKQLR 435 Query: 723 EQPGETNARRGGGNE 737 + P + + + Sbjct: 436 DHPWDQIGNKYDEGD 450 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 2/115 (1%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I +++ R K + + G +L G V N+TNFG FV+I DGLV Sbjct: 504 ILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTVRNITNFGVFVEIEPGIDGLV 563 Query: 679 HISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 H+S LS K + P +V + V +L +D +R+RI+L + + P + A Sbjct: 564 HVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISLGHKQVKTNPWDQFAD 618 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 1/104 (0%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + +I +++ R K + + + + G G V V + G V + + Sbjct: 587 LDVVILNIDEERRRISLGHKQVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLPLDV 646 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 + V S L N + GD ++++V+ D +K I L+ Sbjct: 647 EAFVPGSELKNG-PKAFKNHYHEGDELELQVIRFDKDQKDIVLS 689 Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 11/132 (8%) Query: 588 KDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-ETMN 646 + + R +A FT E +G D ELE + P QF D V ET Sbjct: 135 TETVSPDELERTEEAQGFTGETYGETVSLD---ELETEEQAPADTSVYDQFRDVVDETSI 191 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D++ I+EG V V +DIG DG+V + GD V+V + Sbjct: 192 DVREQDIVEGRVLRVNEDYVVIDIGYKSDGIVSRDEFG-------EEEIHPGDTVEVYLE 244 Query: 707 EVDLQRKRIALT 718 + + ++ L+ Sbjct: 245 RKEDRDGQLVLS 256 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 6/124 (4%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFGAFVD 669 T+ + EL++ K + + T N L+ G + +G V +TNFGAFVD Sbjct: 497 TLRLRVIELDRSKNKVVLSRKAILEEEYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVD 556 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 +G DGL+H+S +S VE P + G ++VK+L +D + +++L + L P +T Sbjct: 557 LG-GVDGLLHVSEISWGRVEHPRDALSEGQEIEVKILGIDREEGKVSLGRKQLLPNPWDT 615 Query: 729 NARR 732 A R Sbjct: 616 AAER 619 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + I +++ K G I+EG + + FGAFV++ Sbjct: 587 IEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGI 646 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GLVHIS L+++ V+ P VV GDI+ VKVL VD Q +R++L++R + E N ++ Sbjct: 647 EGLVHISQLADRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLR--QAIREKNRKQAK 704 Query: 735 GNERPQNNRPAAK 747 E+P N+ + Sbjct: 705 PAEKPAENQNESG 717 Score = 67.7 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 2/120 (1%) Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 PG PE + + M +L+ G ++ G V +T+ VD+G +G++ ++ LS Sbjct: 339 PGETGTPEEQRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELS 398 Query: 685 NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ--PGETNARRGGGNERPQNN 742 ++ V DPH VV GD + V VL + + L+ R ++ E E Q Sbjct: 399 HRNVTDPHEVVAVGDTINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGE 458 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 5/108 (4%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVET-MNDLQPGMILEGAVTNVTNFGAFVDIGV 672 T+ ++ E P + A E L G ++G V V G VD+G Sbjct: 414 TINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVIEVVKGGLLVDVG- 472 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G + S + +VED + + G ++++V+E+D + ++ L+ + Sbjct: 473 -VRGFLPASLVERGYVEDLNAYL--GQTLRLRVIELDRSKNKVVLSRK 517 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 2/96 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ ++ G ++EG V N+T +G FVD+G DGL+HI+ +S V+ P + G + V Sbjct: 234 TLQNIHEGKVVEGVVKNITEYGVFVDLG-GIDGLLHITDISWGRVKHPSELFGVGQTITV 292 Query: 704 KVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 KVL++DL+R+R++L M+ L E P T + R ER Sbjct: 293 KVLDLDLERERVSLGMKQLKEDPWTTASDRYPVGER 328 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 36/120 (30%), Positives = 58/120 (48%), Gaps = 2/120 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ +++ R K G +EG + N+T+FG F+ I Sbjct: 377 LEAVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYPIGTTIEGRIKNITDFGMFIGIDEGI 436 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 DGLVHIS +S K + P V K GD V+ VL +D + +R +L ++ L+ P ET + R Sbjct: 437 DGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDRENERFSLGIKQLEPDPWETISER 496 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 4/180 (2%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 + + + L+ S + + D V I+ +++ K + Sbjct: 428 MFIGIDEGIDGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDRENERFSLGIKQLEP 487 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 Q G + G +T+VT+FG FV++ +GLVH+S ++ + V+ P G Sbjct: 488 DPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSEVAKEKVKTPVGQFNVG 547 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 D V+ V+ ++ + +RI L+++ E+ + + G NE +N+PA+ G Q A Sbjct: 548 DTVETVVVNINPKERRIGLSIKRLEE----DEQEGYFNEYMASNKPASSALGEAFQRAAK 603 Score = 98.5 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 3/129 (2%) Query: 607 DEKFGV-PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 E FGV T+T + +L+ K + + G + G V ++T++G Sbjct: 281 SELFGVGQTITVKVLDLDLERERVSLGMKQLKEDPWTTASDRYPVGERVSGKVVSLTDYG 340 Query: 666 AFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDE 723 AFV++ +GL+H+S +S + P VV GD ++ VL++ +R++L M+ + Sbjct: 341 AFVELEEGIEGLIHVSEMSWTRKIRHPSKVVSVGDDLEAVVLDIKPSNRRVSLGMKQVAP 400 Query: 724 QPGETNARR 732 P + + Sbjct: 401 NPWDVIGEK 409 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E+ + G ++ G + + VDIG +GL+ I D + GD V+ Sbjct: 63 ESFKRFEEGEVVTGKIIQIDKDYVLVDIGYKSEGLIPIREFIE---PDGTVAAEIGDEVE 119 Query: 703 VKVLEVDLQRKRIALT 718 V V +D + + + ++ Sbjct: 120 VMVERLDSEDEGVMVS 135 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 6/134 (4%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG----VETMNDLQPGMILEGAVTNVTNF 664 +F ++T I EL + R + + T N ++ G + +G V ++T+F Sbjct: 438 EFLKRSITVRILELNEKRRKVVGSARVIIEEEKEALANRTWNSMEVGKVFKGTVKSLTDF 497 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT-MRLDE 723 GAFVDIG DGL+HIS LS V+ P V+K GD V+V VLE D ++K+++L ++++ Sbjct: 498 GAFVDIG-GVDGLIHISELSWTRVKHPSEVLKVGDEVEVTVLEFDKEKKKVSLGYRKMED 556 Query: 724 QPGETNARRGGGNE 737 P + + Sbjct: 557 NPWYKIEEKYKVGD 570 Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 73/158 (46%), Gaps = 5/158 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + E +K + ++ + + + G +++ V FGAFV++ Sbjct: 533 VEVTVLEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGV 592 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR----LDEQPGETNA 730 DGLVHIS +S+K + ++ G V K++EVD + K+I+L+++ +D ++ + Sbjct: 593 DGLVHISQISSKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPPSSKSES 652 Query: 731 RRGGGNE-RPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 + G+E + + + E + N + D ++ Sbjct: 653 KAKDGSEAKETSANTEEEAEPTEHREDMNVTVEDLVSK 690 Score = 43.4 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 6/157 (3%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLK----ASDFTDEKFGVPTVTDIIKELEKPGR- 627 Y + ++ T + +++ +K ++ + + + V + EL K G Sbjct: 226 YDICKKHCNLTYKIETSGDLPPVDIKKIKKVGISAGASTPDWVIEEVIKKMSELNKQGMV 285 Query: 628 DPRPEFKTAQFADGVE-TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 D FA+ E + + G ++G + + FVD+G DG++ + ++ Sbjct: 286 DILENDGEIDFANAFENSFVRIHAGDTVKGKIIGFNSNEVFVDLGYKADGIIPLEEYTDD 345 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 + VK G+ V+V V V+ + L+ R + Sbjct: 346 PNFNIEKEVKIGEEVEVLVEMVNDGEGNVRLSKRKVD 382 >UniRef50_B1YKU0 RNA binding S1 domain protein n=3 Tax=Bacillales RepID=B1YKU0_EXIS2 Length = 130 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 2/127 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M + + ++ G VT + NFGAFV + GLVHIS +S+ +V+D + VK GD V VK Sbjct: 1 MANFEKDQVVTGKVTGIQNFGAFVALDEQTQGLVHISEISHDYVKDINDYVKVGDEVTVK 60 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 VL++D K++ L+++ ++ + AR R R A P ++ + G + + Sbjct: 61 VLDIDEANKKMKLSIKATQEAPKREAR--AKGPRKNAGRRDAGPAFKQEEAPGFNVLKGK 118 Query: 765 LAAAMGK 771 L + K Sbjct: 119 LEEWIEK 125 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 72/130 (55%), Gaps = 6/130 (4%) Query: 613 PTVTDIIKELEKPGRDPRPEFKT----AQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 T+ + E+E+ + K + +T+ +LQ G +++G VT + +FGAFV Sbjct: 437 KTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEELQEGQVVKGKVTKIVDFGAFV 496 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGE 727 D+G +GL+HIS +S +E P V++ G ++VKVL V+ + +RI+L ++ L P E Sbjct: 497 DLG-GIEGLLHISEMSWGRIEHPSEVLEEGQEIEVKVLAVNKEEERISLGLKQLLPDPWE 555 Query: 728 TNARRGGGNE 737 A++ E Sbjct: 556 EFAKKHYEGE 565 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 62/125 (49%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + + + K K E G ++ G +T + +FGAF++I Sbjct: 528 IEVKVLAVNKEEERISLGLKQLLPDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGI 587 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GL+HIS LS++ V+ P VV G+ +K +++ +D ++KR+ L+++ E+ ET + Sbjct: 588 EGLIHISQLSHRHVKTPDEVVSVGEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEA 647 Query: 735 GNERP 739 + P Sbjct: 648 PKKEP 652 Score = 71.9 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 8/170 (4%) Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKT 635 ++ + + + L ++EK +I + + P + Sbjct: 225 FRQLKSYNKIGITAGASTPDWLIKEVIEAMSEEKRDAELQEEIQEGVNTDNTPETPNGEE 284 Query: 636 AQFADGVET------MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 + E DL+ G ++G V + + G +VD+G +GL+ + LS++ E Sbjct: 285 NPIENEEEFNYDDNNPADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFE 344 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD--EQPGETNARRGGGNE 737 DPH +V+ G+ + V VL ++ + + L+ + E+ E + +E Sbjct: 345 DPHEIVEEGEEIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDE 394 Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 5/109 (4%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVE-TMNDLQPGMILEGAVTNVTNFGAFVDIG 671 + I+ LE + K A F E + + I+E VT G VDIG Sbjct: 354 EEIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREVKGGLVVDIG 413 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G VH S ++ +VED V G +++KV+EV+ + + L+ + Sbjct: 414 --LRGFVHASHVAIGYVEDLSDYV--GKTLRLKVIEVERDKNNVVLSAK 458 >UniRef50_A2ID48 RpsA n=1 Tax=Pasteuria ramosa RepID=A2ID48_9BACL Length = 392 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 8/132 (6%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGA 657 DF+D K V T+ I E+++ + T N+++ G +++G Sbjct: 136 VEDFSDYKDRVITMK--IAEIDQDSNKLILSCRAVHEEAAQHQREATFNNIEIGSVVDGI 193 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V +T+FGAFVD+G DGLVHIS +S + V P V+ GD VK KVL+ D + RI+L Sbjct: 194 VRRLTDFGAFVDVGA-VDGLVHISQISWQRVNHPSDVLNIGDEVKCKVLKFDRESGRISL 252 Query: 718 TMRLDEQPGETN 729 ++R D QPG + Sbjct: 253 SIR-DTQPGPWS 263 Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 31/116 (26%), Positives = 55/116 (47%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++ + Q + L I++G V + +FGAFV+I +GL+HIS Sbjct: 243 FDRESGRISLSIRDTQPGPWSGVEDQLVENDIVKGVVKRLVSFGAFVEILPGVEGLMHIS 302 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 +S++ + P ++K G + VK+L VD +R++LTM EQ + + Sbjct: 303 EISHRHIVTPSEILKEGQEILVKILNVDSNARRVSLTMCDVEQNTSQKSENSSNKQ 358 Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G ++ G+VT + A + I + ++ IS LS + + ++K D ++++VL Sbjct: 11 FEIGSLVTGSVTKIDKNQALIKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVLR 70 Query: 708 VDLQRKRIALTMRLDE 723 +D + + L+ R + Sbjct: 71 LDEEENKFILSKRAVD 86 Score = 43.8 bits (102), Expect = 0.028, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 12/165 (7%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 + E I A + + + LK D + + + L K D + Sbjct: 31 IKIAEDIEAILPISELSCLRINEVGDMLKLDDELELEVLRLDEEENKFILSKRAVDAKKA 90 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 + Q + + +E V++V G +D+G G V S + +VED Sbjct: 91 WPFLQ--------HKYENNENIEAKVSDVVKGGLVIDLG--VRGFVPASLVECHYVEDFS 140 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 ++ +K+ E+D ++ L+ R + + R N Sbjct: 141 DY--KDRVITMKIAEIDQDSNKLILSCRAVHEEAAQHQREATFNN 183 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 8/140 (5%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQ 649 +S + DFTD + T++ ++ EL++ R ++ Q E + L+ Sbjct: 129 ASLVEAHFVEDFTD--YKGKTLSLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLE 186 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G +L+G V +T+FGAFVDIG DGLVHIS LS+ VE P VV+ G VKVKVL VD Sbjct: 187 VGSVLDGKVQRLTDFGAFVDIG-GIDGLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVD 245 Query: 710 LQRKRIALTMRLDEQPGETN 729 +RI+L+++ D PG N Sbjct: 246 RDNERISLSIK-DTLPGPWN 264 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 64/117 (54%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + +++ K + ++PG +LEG V + +FGAFV+I Sbjct: 237 VKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGV 296 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNAR 731 +GLVHIS +SNK + PH V++ G VKVKVL+V+ +RI+L+MR E+ + + Sbjct: 297 EGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNENEERISLSMRELEETPKADQE 353 Score = 48.4 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%) Query: 649 QPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + G +++G VT V + V+I V Q G++ IS LS+ VE VVK D + +KV + Sbjct: 14 EVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVVKVDDELDLKVTK 73 Query: 708 VDLQ 711 V+ Sbjct: 74 VEDD 77 Score = 42.3 bits (98), Expect = 0.079, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 4/95 (4%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + + + E V +V G VDIG G + S + FVED G Sbjct: 90 RAWEDLEKKFETKEVFEAEVKDVVKGGLVVDIG--VRGFIPASLVEAHFVEDFTDY--KG 145 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 + + V+E+D + R+ L+ R + + N ++ Sbjct: 146 KTLSLLVVELDRDKNRVILSHRAVVESEQANKKQE 180 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 ++ +I ++K G+ K Q I+EG V N+TN+GAFV++ Sbjct: 355 ISVVILGVDKDGQQLSLGMKQTQENPWTRVAEKYPVDTIVEGKVRNLTNYGAFVELEEGI 414 Query: 675 DGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETN 729 DGL+H+S +S + P +++ G V+ K+L VD +R+RIAL ++ LDE P + Sbjct: 415 DGLLHVSDMSWTRKISHPSEMLEKGQPVRCKILSVDQERRRIALGLKQLDEDPWARD 471 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 40/226 (17%) Query: 518 QNIVAWRD---ENGQFQNRQQLLKVSRLGPK---AFEQCA---GFLRINHGDNPLDASTV 568 +NIV R E + ++R+ LLK +G + A F+ + D L + + Sbjct: 191 RNIVVSRRSLIERQREEDREALLKELEIGQVRKGVVKNIAEFGAFVDLGGIDGLLHITDM 250 Query: 569 HPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRD 628 E ++A Q+ + ++ +++ + Sbjct: 251 SWERIGHPSEMVAIDQE-----------------------------IEVMVLHIDREKKK 281 Query: 629 PRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KF 687 K + + G +++G+V NV ++GAFV + +GLVHIS +S + Sbjct: 282 IALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSYGAFVKLEPGIEGLVHISEMSWTRR 341 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARR 732 V P +V GD + V +L VD ++++L M+ E P A + Sbjct: 342 VNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQENPWTRVAEK 387 Score = 98.5 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 26/176 (14%) Query: 548 EQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTD 607 F+ + G + L +H +I ++ K G + L Sbjct: 402 TNYGAFVELEEGIDGL----LHVSDMSWTRKISHPSEMLEK---GQPVRCKILSVDQER- 453 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 I L++ DP + QPG ++ GAVT +TNFG F Sbjct: 454 --------RRIALGLKQLDEDPW----------ARDIPGKYQPGQVVSGAVTKITNFGVF 495 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 V + +GL+HIS L++ VE+P VVK GD + VK+L VD+ ++I L+ + E Sbjct: 496 VGLEDGLEGLLHISELADHKVENPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVE 551 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 3/123 (2%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + D E G + K + E M+ ++ G ++ G V+ G VDI Sbjct: 96 LEDETAAPEDGGMVRISKRKAKKLDAWKEMMDRIKEGQVVTGTVSRKIKGGLLVDIE-GV 154 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 + + S + + D G V+ +VL++D R+ I ++ R + R Sbjct: 155 NVFLPASQVDIRRPADIGDY--IGRTVQCEVLKIDEARRNIVVSRRSLIERQREEDREAL 212 Query: 735 GNE 737 E Sbjct: 213 LKE 215 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 13/231 (5%) Query: 513 TRMMAQNIVAWRDENGQFQ-NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + ++ I+ R E + +R+Q+L+ A Q L + + Sbjct: 438 GQEISFKIIEMRPEKEKLILSRKQVLEEE-----AAVQKDKVLAELEPGQIIKGTV---- 488 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + A D + + SE+ + + + + + E+ Sbjct: 489 --KRLTNFGAFVDVGGIDGLVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPERERIGL 546 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 + AQ E G ++EG VT + +FGAFV++ +GLVHIS L+N V+ P Sbjct: 547 SLRQAQPDPWTEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANYHVKQP 606 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 VV+ GD+VKVK+L+++ KR++L+MR D P + ++P++ Sbjct: 607 SEVVQQGDVVKVKILDINTDGKRVSLSMR-DAAPRPKKEQTRQVQQQPEDT 656 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 1/125 (0%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETM-NDLQPGMILEGAVTNVTNFGAFVDIGV 672 T+ ++I ++E E +TA ++ + G ++ G V V++ VDIG Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEEVSLDQEIKEFSAGDVVTGTVVQVSDDEVLVDIGY 327 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 +G++ + + + V++ G V+V V +VD Q RI L+ + E+ + Sbjct: 328 KSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELE 387 Query: 733 GGGNE 737 E Sbjct: 388 KAFEE 392 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 45/113 (39%), Gaps = 2/113 (1%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + G + K ++ GR + E + G IL G V G V Sbjct: 351 ENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELEKAFEEGTILSGKVKEAVPAGLVV 410 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 ++G D + S + +++ D + G + K++E+ +++++ L+ + Sbjct: 411 ELGGGYDAFMPGSLVDVRYIPDFNEF--QGQEISFKIIEMRPEKEKLILSRKQ 461 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 64/136 (47%) Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 SE+ + + +D + I L++ K + M Q G I+ Sbjct: 540 SEIAHTRIDQPSDVLQEGEEIDVYILALDREKERVSLSRKKLLKSPWEIVMEKFQEGDII 599 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG V + FGAFV+I DGLVHIS L+N VE P VV+ + +K+K+L +D + KR Sbjct: 600 EGTVVRIAPFGAFVEIEAGVDGLVHISQLANHRVEKPEDVVQVNEKIKIKILSIDPEEKR 659 Query: 715 IALTMRLDEQPGETNA 730 I L+++ E Sbjct: 660 IGLSLKEALNEMENQE 675 Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 14/177 (7%) Query: 558 HGDNPLDASTVHPEAYPVVERILAATQQA--------LKDLMGNSSELRNLKASDFTDEK 609 AS + PE V +I + + D M E + L + T+++ Sbjct: 234 RTFQIQKASEIKPEWLDGVSKIGITAGASTPDWIIKEVLDRMTLYEEEKMLDENQETNQE 293 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ---PGMILEGAVTNVTNFGA 666 T +E+++P FA M D G +++G V V + Sbjct: 294 TSQETQET--QEIQEPEVKEEVSANEESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEV 351 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 VD+G +G++ + +S + ++ +V+ GD ++V VL+ D I L+ + + Sbjct: 352 MVDVGGKSEGIIPLREMSLQDIDSAKELVEVGDEIEVMVLKWD-DDGTILLSKKKVD 407 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/185 (14%), Positives = 59/185 (31%), Gaps = 16/185 (8%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 +++ + +G SE + + ++ E+E + Sbjct: 342 KVIQVLDDEVMVDVGGKSEGIIPLREMSLQDIDSAKELVEVGDEIEVMVLKWDDDGTILL 401 Query: 638 FADGV-------ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 V E + G ++ G VT G VD+G + S + + +V++ Sbjct: 402 SKKKVDAKILLDELEESFKEGKVITGTVTGSVKGGLLVDVG--IVAFLPASHVEDGYVKN 459 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKR---IALTMRLDEQPGETNARRGGGNERPQNNRPAAK 747 + K++E + ++R + L+ + E E A++ K Sbjct: 460 LDEY--INRELSFKIIEFNRNKRRGSQVVLSRK--ELVAEEKAKQKKQFWEEIEEGQVRK 515 Query: 748 PRGRE 752 R + Sbjct: 516 GRIKR 520 >UniRef50_D1PLC1 RNA-binding protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PLC1_9FIRM Length = 154 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 63/118 (53%), Gaps = 3/118 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 LQ G I+EG VT + FGAFV + + GLVHIS +S +FV+D V++ G V VKVL Sbjct: 3 LQVGDIVEGKVTGIKPFGAFVSLPEGKTGLVHISEVSYEFVQDLSAVLEDGQTVTVKVLS 62 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAA--KPRGREAQPAGNSAMMD 763 + +IAL+++ + E +R G +RP KPR + +PA M Sbjct: 63 IAPD-GKIALSIKRTQPAPERGSRSQQGGGARPAHRPKREEKPRVWQPKPAAPQGEMS 119 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 33/228 (14%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 L+R A+ +W FQN +++ V F Q G ++ Sbjct: 93 LSRDKARREESWGKLEKAFQNNEKVFGV------IFNQVKGGFTVD-------------- 132 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 L +Q ++ + + + N + F + + + R Sbjct: 133 -LDGAVAFLPRSQVDIRPIRDVAPLMNN-------SQPFQILKMDRRRGNIVVSRRTVLE 184 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 E + Q + V +L+ G +++G V N+T++GAFVD+G DGL+H++ ++ + V P Sbjct: 185 ETRAEQRQELV---QNLEEGQVIDGVVKNITDYGAFVDLG-GIDGLLHVTDIAWRRVNHP 240 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 V+ G VKVK+++++ + RI+L M+ L + P + + N R Sbjct: 241 TEVLTIGQTVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNAR 288 Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV I ++ K G VTN+T++GAFV++ Sbjct: 249 TVKVKIIKINHETHRISLGMKQLLDDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPG 308 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGETNAR 731 +GL+H+S +S K P +V V+V+VLEVD ++RI+L ++ P E Sbjct: 309 IEGLIHVSEMSWTKKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVE 368 Query: 732 R 732 + Sbjct: 369 K 369 Score = 82.7 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 6/118 (5%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + E++ R K + G +EG V N T FG F+ + DG+V Sbjct: 341 VLEVDSVKRRISLGLKQTMRNPWEVFVEKHPVGSTVEGEVKNKTEFGLFLGLDGDVDGMV 400 Query: 679 HISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-----QPGETNA 730 H+S L K E K GD+VK VL+VD++++RI+L ++ E +PG+ Sbjct: 401 HLSDLDWKLPGEQVIDNFKKGDMVKAVVLDVDVEKERISLGVKQLEGDPFAEPGDVKK 458 Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 23/149 (15%), Positives = 53/149 (35%), Gaps = 2/149 (1%) Query: 583 TQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 + ++ S L D V ++ +++ K + Sbjct: 392 LDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDVDVEKERISLGVKQLEGDPFA 451 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 E D++ G ++ V +V G V I G + + S L+ + G+ V Sbjct: 452 EPG-DVKKGAVVTCEVLDVKESGIDVQIVGTDFNTFIKRSELARDRNDQRSDRFAVGEKV 510 Query: 702 KVKVLEVDLQRKRIALTMRLDEQPGETNA 730 +V++ D + +++ ++++ E E A Sbjct: 511 DARVIQFDKKARKVQVSIKALEVAEEKEA 539 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 6/124 (4%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETM----NDLQPGMILEGAVTNVTNFGAFV 668 + I EL+K + + E N LQ G I +G V+++ NFGAFV Sbjct: 167 KEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNFGAFV 226 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGE 727 D+G DGLVH+S LS K ++ P VV+ G+ V V+VL+VD+ R+R++L+++ E P Sbjct: 227 DLG-GVDGLVHVSELSWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSLKATQEDPWR 285 Query: 728 TNAR 731 AR Sbjct: 286 HFAR 289 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 35/106 (33%), Positives = 55/106 (51%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + +++ K Q G I+ G VT + FGAFV + +GLV Sbjct: 262 VLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIEGLV 321 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 HIS L+ + VE P VV GD VKV+++DL+R+RI+L+++ + Sbjct: 322 HISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANE 367 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/78 (30%), Positives = 39/78 (50%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +T+ G I+EG + V +DIG +G++ LS K DP+ VV GD V+ Sbjct: 28 KTIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPNEVVSVGDEVE 87 Query: 703 VKVLEVDLQRKRIALTMR 720 VL + + R+ L+ + Sbjct: 88 ALVLTKEDKEGRLILSKK 105 Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 12/181 (6%) Query: 554 LRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP 613 ++ + + ++ + V + + +L + ++ G Sbjct: 30 IKYFNDGDIVEGTIVKVDR----DEVLLDIGYKTEGVIPARELSIKHDVDPNEVVSVGDE 85 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI-LEGAVTNVTNFGAFVDIGV 672 ++ + +K GR + + AQ+ T+ L+ ++G V V G +DIG Sbjct: 86 VEALVLTKEDKEGRLILSKKR-AQYERAWGTIEALKEKDEAVKGIVIEVVKGGLILDIG- 143 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPGETNA 730 G + S + + V D G ++ K++E+D R + L+ R L++ E + Sbjct: 144 -LRGFLPASLVEMRRVRDLQPY--IGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRS 200 Query: 731 R 731 Sbjct: 201 E 201 >UniRef50_D1CBU2 RNA binding S1 domain protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CBU2_THET1 Length = 431 Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 5/119 (4%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETM---NDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 +I+ K R E Q +L+ G I++G VT++ +FGAFVDIG Sbjct: 224 VIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGRVTSLADFGAFVDIG-GA 282 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 DGL+H+S +S + P V+K GD V V VL +D + K+IAL+M+ +P T R Sbjct: 283 DGLIHLSEISWGRINHPSEVLKPGDEVDVMVLNIDREHKKIALSMKRTQPEPWATAMER 341 Score = 90.0 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 7/111 (6%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ +++ + K Q M G I+EG VT + FG FV + Sbjct: 309 VDVMVLNIDREHKKIALSMKRTQPEPWATAMERYDVGQIVEGEVTQIAPFGVFVRLEDGI 368 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 +GLVH+S L + V + GD ++++V+++D QR+RI L++R ++P Sbjct: 369 EGLVHMSELGDTKV-------QVGDKLRLRVIKMDTQRRRIGLSVRQLDEP 412 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats. Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 4/174 (2%) Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + ++ + VT I E K G R + + + G I+ G V Sbjct: 366 KHPSDALSEGQAVRVKVTKIDPETGKIGLSIRDTLENP----WQKVAEEFSVGAIINGKV 421 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 T + +FGAFV+I +GLVH+S +S+ V +V+KAG+ V+VKV+ +D +++RI L+ Sbjct: 422 TKIMDFGAFVEIAPGIEGLVHVSEVSHTRVSRIESVLKAGEKVEVKVVNIDKEKRRIGLS 481 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKK 772 ++ + + +E P++ A K + ++ G + + G K Sbjct: 482 IKALSPAPASKSGGKKKDEEPEDLDRALKVKPTASELKGGIVNEQSQGSKFGLK 535 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 2/99 (2%) Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV 694 A+ ETM LQ G + +G VT + +FGAFVDIG DGLVH+S +S V+ P Sbjct: 313 KAKEDSRKETMVTLQVGQMRDGTVTRLQDFGAFVDIG-GVDGLVHVSQISWDRVKHPSDA 371 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 + G V+VKV ++D + +I L++R E P + A Sbjct: 372 LSEGQAVRVKVTKIDPETGKIGLSIRDTLENPWQKVAEE 410 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 3/113 (2%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++ E + V DL G++++ V V G +G G + S Sbjct: 213 IKYDREQGLYEALVPGSSVSVVDWGDLTEGILVDAVVDGVNKGGLECAVGQ-ARGFIPAS 271 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 ++ V + + G ++ V E + +R+ + L+ R + + ++R+ Sbjct: 272 QIAPHHVTNMEDYL--GQKLQCLVTEANPERRNLVLSARAVAEKAKEDSRKET 322 >UniRef50_Q0WVD2 Elongation factor Ts (Fragment) n=5 Tax=cellular organisms RepID=Q0WVD2_ARATH Length = 631 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 44/105 (41%), Positives = 66/105 (62%), Gaps = 3/105 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 +L PG G V + FGAFVD G DGLVH+S LS+ FV+D +VV G VKV++ Sbjct: 131 EELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRL 190 Query: 706 LEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +E D++ KRI+LTMR ++ P + R+ GG+++P++ +G Sbjct: 191 VEADIESKRISLTMRENDDPPK---RQSGGSDKPRSGGKRDGSKG 232 Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats. Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 5/82 (6%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP---HTVVKAGDIVK 702 + G +L+G V N+T GAF+ IG ++G + + ++ + + ++AG VK Sbjct: 243 SKFAKGQMLDGVVKNLTRSGAFITIGEGEEGFLPTAEEADDGIGSMMMGGSSLQAGQEVK 302 Query: 703 VKVLEVDLQRKRIALTMRLDEQ 724 V+VL + R R+ LTM+ ++ Sbjct: 303 VRVLRI--ARGRVTLTMKEEDD 322 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 61/130 (46%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V II ++ + K A+ + + G +++G VT + FGAFV++ Sbjct: 456 VEAIILDINPEQQRISLGLKQAETDPWANINDLYKVGDVVKGKVTKIAAFGAFVELTNKI 515 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 DGL+HIS LS VE V+ GD V+ +V++VD +RI L+++ + + Sbjct: 516 DGLIHISQLSRDRVEKVKDVLNVGDEVEARVIKVDTDERRIGLSIKAVGENFSPEDLKAA 575 Query: 735 GNERPQNNRP 744 E +P Sbjct: 576 EEEYTAALKP 585 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 70/147 (47%), Gaps = 2/147 (1%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 + ++ L+ S + S +D V ++ ++++ R + + Sbjct: 336 EIETGVEGLIHVSEMSWTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPW 395 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDI 700 G + G V N+T++GAFV+I DG++H+S +S + +P+ V+K G Sbjct: 396 EVLAEKYPVGRRITGKVRNMTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQE 455 Query: 701 VKVKVLEVDLQRKRIALTMRLDE-QPG 726 V+ +L+++ +++RI+L ++ E P Sbjct: 456 VEAIILDINPEQQRISLGLKQAETDPW 482 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 + +I ++K K + ++ G + G V N+ +GAFV+I Sbjct: 280 EEIEVVIIGIDKEKERVSLGLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIET 339 Query: 673 HQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNA 730 +GL+H+S +S K V V+ G+ V+ VL++D ++I+L +R E P E A Sbjct: 340 GVEGLIHVSEMSWTKRVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLA 399 Query: 731 RRGGGNERPQNNRPAAKPRG 750 + P R K R Sbjct: 400 EK-----YPVGRRITGKVRN 414 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 55/93 (59%), Gaps = 2/93 (2%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +++ + +G V N+T+FGAF+D+G DGL+HI+ +S + P V+K G+ ++V ++ Sbjct: 229 EMKVDELRKGVVKNITDFGAFIDLG-GVDGLLHITDISWGRISHPSEVLKVGEEIEVVII 287 Query: 707 EVDLQRKRIALTMRLD-EQPGETNARRGGGNER 738 +D +++R++L ++ P + + + Sbjct: 288 GIDKEKERVSLGLKQKTRNPWDDVVSKYPKGSK 320 Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + E+ N G I+EG + GA VDIG +G V S Sbjct: 51 ELLQSSESTNAFTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASEFLK------FDEAN 104 Query: 697 AGDIVKVKVLEVDLQRKR--IAL 717 GD + V + E++ + I+L Sbjct: 105 IGDKIDVYLEEIENRNNMPEISL 127 >UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG Length = 482 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 2/138 (1%) Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 ++++D + + E G K + L G ++EG Sbjct: 233 WARVQSADEAVTQGDTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVADRLAAGTVVEG 292 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V T FGAFV++ +GLVHIS +S + + VV GD V VK+ ++D ++RI Sbjct: 293 KVVRCTPFGAFVEVLPGIEGLVHISEMSWTRRILKAEDVVIPGDTVSVKIKDIDSAKRRI 352 Query: 716 ALTMRLDE-QPGETNARR 732 +L++R E P + A + Sbjct: 353 SLSLREAEGDPWDGAAEK 370 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND----LQPGMILEGAVTNVTN 663 E++ T +I E GR+ + A E+ + L G +++ +T +TN Sbjct: 152 EEYLGQTFQFMITRCENNGRNVVVSRRVLLEAQQEESRKEYMKTLNEGDVVDVCITRLTN 211 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK--RIALTMR- 720 FGAF ++ +GL+HIS L V+ V GD ++ KVL+++ K RIAL+ + Sbjct: 212 FGAFAELAPGVEGLIHISELGWARVQSADEAVTQGDTLRAKVLKIESTAKGLRIALSAKQ 271 Query: 721 LDEQPGETNARRGGGN 736 + E P T A R Sbjct: 272 VMEDPWNTVADRLAAG 287 Score = 74.6 bits (182), Expect = 2e-11, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 13/159 (8%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV+ IK+++ R + A+ PG + G V FG FV+I Sbjct: 337 TVSVKIKDIDSAKRRISLSLREAEGDPWDGAAEKFAPGTEVTGTVEKCAKFGMFVNIAPG 396 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 GL+ S +S + K GD V + V+E++ +++ LT + +A R Sbjct: 397 ITGLLPQSRISAA-PKSGLAGCKPGDTVTLAVMEINPAERKVTLTTK--------DAARQ 447 Query: 734 GGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKK 772 E P + R K +Q G + AL A+ KK Sbjct: 448 EDAEIPASYRVQPKS----SQGGGFGTLGQALKDALNKK 482 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 48/115 (41%), Positives = 63/115 (54%), Gaps = 6/115 (5%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 I + +K R K + E L G ++EG V +TNFGAFVDIG Sbjct: 429 IIDFDKRKRRIVLSRKNVLMRELEEKRSQIFESLHIGDVIEGTVQRLTNFGAFVDIG-GI 487 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGET 728 DGLVHIS LS V+ P VV AGD VKV+VL +D ++ RIAL ++ E+P + Sbjct: 488 DGLVHISELSWNRVKHPSEVVSAGDKVKVQVLSLDEEKDRIALGLKQTTEKPWDK 542 Score = 98.9 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 12/121 (9%) Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 N+ +FGAFV + DGL+H+S + + +E P ++ G V+VKV+E+D + K+I+L++ Sbjct: 559 NILDFGAFVRLEEGVDGLLHVSQICREHIEKPQDRLEIGQEVEVKVIEIDQENKKISLSI 618 Query: 720 RL------DEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG----NSAMMDALAAAM 769 + D++ E + ERP+ RP ++ Q N+ + D L ++ Sbjct: 619 KALLEPIEDDENKEKTEKPKVKKERPR--RPKENRVKKQIQEPKEDEFNTTIGDLLGFSI 676 Query: 770 G 770 G Sbjct: 677 G 677 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 3/129 (2%) Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 ++ LK + G T +IKE + + + ++ G I+ Sbjct: 239 DINILKKFNKIGITAGASTPDKVIKEAVSSMENFDKGEMMEAIDNSFKR---IKKGEIVT 295 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 G V VT+ V++G DG++ LS P + K GD ++V VL++D + Sbjct: 296 GEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDLYKQGDEIEVFVLKMDDGDGNV 355 Query: 716 ALTMRLDEQ 724 L+ R E Sbjct: 356 VLSARRVED 364 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 3/148 (2%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 Y ++ ++ +N A K G ++K + G Sbjct: 300 YVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDLYKQGDEIEVFVLKMDDGDGNVVLSA 359 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 + E I+ V N G + + S ++ KF D Sbjct: 360 RRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGLTASLD-GISAFIPASHVTVKFQRDLS 418 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V GD + ++++ D +++RI L+ + Sbjct: 419 KFV--GDDFQCEIIDFDKRKRRIVLSRK 444 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 6/118 (5%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGV----ETMNDLQPGMILEGAVTNVTNFGAFVD 669 T+ + E+++ + + + E + L G I+ G V+ + +FG FVD Sbjct: 422 TLELLPIEIDQAKQKIVLSRRKVLEQEQQRRAEELFSRLAEGQIVTGTVSRIADFGVFVD 481 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 +G DGL+HIS LS V++P VV GD V+V V +VD + KRI+L+++ + P Sbjct: 482 LG-GVDGLIHISDLSWHRVKNPTEVVNIGDEVQVFVQKVDPKAKRISLSLKRVQRDPW 538 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 11/138 (7%) Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + N +E+ N+ + P I L++ RDP + + L+ Sbjct: 499 VKNPTEVVNIGDEVQVFVQKVDPKAKRISLSLKRVQRDPWYD-----------VVEGLRE 547 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM + G VT + FGAFV++ +GLVH+S L+++ V VV+ G V VK+L +D Sbjct: 548 GMTVAGKVTKLAKFGAFVEVKPGVEGLVHLSELADRRVASAQEVVEVGQTVTVKILGIDK 607 Query: 711 QRKRIALTMRLDEQPGET 728 + KRI+L++ +Q E Sbjct: 608 ENKRISLSIAQAQQDAER 625 Score = 56.5 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+PG+IL+G V V FVDIG +G++ ++ L+ E+ VV GD + V VL Sbjct: 286 LEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDVVSEGDEIDVYVLA 345 Query: 708 VDLQRKRIALT-MRLDEQ-PGETNARRGGGNE 737 + + L+ ++ D E NE Sbjct: 346 PEGDDGPVKLSKVKADNIVAWEKLQAAAQANE 377 Score = 49.6 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 7/108 (6%) Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP----GMILEGAVTNVTNFGAFVDIGV 672 +I + P D P + AD + LQ + G VT V G V + Sbjct: 338 EIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGGLAVSL-Y 396 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G V S ++ + V D V G +++ +E+D +++I L+ R Sbjct: 397 GVRGFVPASQVAVQHVADLTPYV--GQTLELLPIEIDQAKQKIVLSRR 442 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 7/128 (5%) Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV----ETMNDLQPGMILEGAVTNV 661 + G II EL K + K + ET+ Q G +++G V + Sbjct: 446 LSQYVGREISARII-ELNKARKKVILSRKVLLEEEYSRKRKETLETTQEGDVVKGVVRRL 504 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR- 720 T FGAFVDIG DGL+HIS +S + P V+K GD ++V+VL +D + ++++L+++ Sbjct: 505 TQFGAFVDIG-GLDGLLHISEISWHRINHPSEVLKVGDELEVQVLRIDRENEKVSLSLKQ 563 Query: 721 LDEQPGET 728 + P E Sbjct: 564 VLPNPWEQ 571 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 50/102 (49%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + +++ K + + + G ++ V + FGAFV++ +GLV Sbjct: 547 VLRIDRENEKVSLSLKQVLPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLV 606 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 HIS L++ V P V+ G + VKVL VD + KRI L++R Sbjct: 607 HISHLADWHVAKPEDVIAEGQQINVKVLSVDDENKRIRLSLR 648 Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 23/72 (31%), Positives = 36/72 (50%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 L+ G I+ G + V VD+G +G+V + LS V P VV+ GD + V V+ Sbjct: 317 SLRSGDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVWVV 376 Query: 707 EVDLQRKRIALT 718 + + RI L+ Sbjct: 377 KAEDNEGRIILS 388 Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 4/117 (3%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 ++K + GR + + G + G V V G VD+GV Sbjct: 375 VVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLLVDLGVRS--F 432 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 + S + +VED V G + +++E++ RK++ L+ ++ + + R+ Sbjct: 433 LPASQVERGYVEDLSQYV--GREISARIIELNKARKKVILSRKVLLEEEYSRKRKET 487 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats. Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E M L G ++EG V N+T +G FVD+G DGL+HI+ +S V P + GD V Sbjct: 202 ELMETLADGQVVEGIVKNITEYGVFVDLG-GIDGLLHITDISWGRVRHPSELFTVGDNVT 260 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +KVL DL +K+I+L M+ L P E+ A + Sbjct: 261 LKVLSFDLDKKKISLGMKQLTPDPWESAAEK 291 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 V ++ +++ R K + G ++EG + N+T+FG F+ I Sbjct: 344 EEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGTVIEGRIKNITDFGLFIGIDD 403 Query: 673 HQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNA 730 DGLVHIS +S K ++ P + K GD+V+ VLE+D +R ++ ++ L+ P E+ Sbjct: 404 DIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKANERFSMGIKQLESDPWESVR 463 Query: 731 RR 732 R Sbjct: 464 DR 465 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 VT + + + K G+ G V ++TN+G FV++ Sbjct: 258 NVTLKVLSFDLDKKKISLGMKQLTPDPWESAAEKYPVGVKTTGKVVSITNYGIFVELEEG 317 Query: 674 QDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 +GL+H+S +S + P VV G+ V VL++ +RI+L M+ ++ P E + Sbjct: 318 VEGLIHVSEISWTRKIRHPSKVVNIGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISE 377 Query: 732 R 732 + Sbjct: 378 K 378 Score = 91.2 bits (225), Expect = 2e-16, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 53/106 (50%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ E++K K + + G + G VTNVT+FG FV++ Sbjct: 433 VRAVVLEIDKANERFSMGIKQLESDPWESVRDRYPIGTKVSGVVTNVTDFGIFVELEEGI 492 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GLVH+S +S + ++ P + G + +V+ V+ ++I L+++ Sbjct: 493 EGLVHVSEVSTERIKTPVGQYEVGAELTARVMNVNADERKIGLSIK 538 Score = 43.4 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 3/76 (3%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 T G ++ G V V VDIG +G ++I+ N E VK D V+ Sbjct: 32 HTFKQFTEGEVVVGKVIAVDKDYVLVDIGYKSEGQININEFKN---EKGEVNVKIYDDVE 88 Query: 703 VKVLEVDLQRKRIALT 718 V + D + +++ L+ Sbjct: 89 VMIEFWDEEHEKLVLS 104 >UniRef50_A9B766 RNA binding S1 domain protein n=6 Tax=Chloroflexi (class) RepID=A9B766_HERA2 Length = 397 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 L+PG ++ G V +T FGAF+D+G DGL HIS LS + V P V++ G V+V V Sbjct: 205 ETLEPGAVVTGRVNQLTPFGAFIDLG-GADGLAHISELSWQRVNHPREVLQPGQEVQVYV 263 Query: 706 LEVDLQRKRIALTM-RLDEQPGETNARR 732 LEVD R+RI L++ RL P T +R Sbjct: 264 LEVDRDRERIGLSLRRLQPDPWATIDQR 291 Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 2/102 (1%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + E+++ + Q G ++ G VTN+ FG FV + +GL+ Sbjct: 263 VLEVDRDRERIGLSLRRLQPDPWATIDQRYDLGQLIVGEVTNIAPFGVFVRVEEGVEGLI 322 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 H S L+ ++ G V+VKV+ +D QR+R+ L++R Sbjct: 323 HASELTEN--GQSPDSLQQGQQVQVKVISLDRQRQRLGLSLR 362 Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 51/145 (35%), Gaps = 9/145 (6%) Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELE-KPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 +LR L + K G T+ + E E K G D E L+ G I Sbjct: 59 QDLRRLPPELVSGIKNGD-TLQVYVMEPESKEGELVLSLNMVQVERDWQEAQTMLENGQI 117 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK------AGDIVKVKVLE 707 +E V G V +G G V S + N + G + +KV+E Sbjct: 118 IEAGVVGYNKGGLLVQVGR-VRGFVPASQVVNLHSRTGTEGQQSAMTKMVGQNIPLKVIE 176 Query: 708 VDLQRKRIALTMRLDEQPGETNARR 732 VD R R+ L+ R Q + + Sbjct: 177 VDRDRNRLVLSERAAMQRWRQSQKE 201 >UniRef50_A9WBG5 RNA binding S1 domain protein n=2 Tax=Chloroflexus RepID=A9WBG5_CHLAA Length = 520 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 42/75 (56%), Positives = 56/75 (74%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 DLQPGM LEG VT++ +G FVDIGV +DGLVHIS +S++ +E P VV+ GD VKV V Sbjct: 99 KDLQPGMELEGKVTSIALYGVFVDIGVGRDGLVHISEMSDRRIETPSEVVQIGDTVKVWV 158 Query: 706 LEVDLQRKRIALTMR 720 ++ + +RI+LTMR Sbjct: 159 KSIEPEARRISLTMR 173 Score = 96.2 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 51/80 (63%) Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 E + L+ G ++EG +T FGAF DIGV +DGL+H+S L+ VE P VK G+ Sbjct: 200 DREKLAALRVGDVVEGVITGFAPFGAFADIGVGKDGLIHVSELAEGRVEKPEDAVKVGER 259 Query: 701 VKVKVLEVDLQRKRIALTMR 720 + K+LE+D + RI+L++R Sbjct: 260 YQFKILEIDGEAARISLSLR 279 Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 50/80 (62%), Positives = 59/80 (73%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 M L+ G ILEG V+ + FGAFVDIGV +DGLVHIS+L+ VE VVK GD VKVK Sbjct: 287 MQQLETGQILEGTVSGIAPFGAFVDIGVGRDGLVHISALAPHRVEKVEDVVKVGDKVKVK 346 Query: 705 VLEVDLQRKRIALTMRLDEQ 724 VL VD Q KRI+LTMRL+E+ Sbjct: 347 VLGVDQQSKRISLTMRLEEE 366 >UniRef50_UPI000190EA94 putative transcription accessory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-2068 RepID=UPI000190EA94 Length = 96 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 85/96 (88%), Positives = 88/96 (91%), Gaps = 3/96 (3%) Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ 740 SSLS KFV+DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET ARRGGG +R Q Sbjct: 1 SSLSTKFVDDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETAARRGGGADRAQ 60 Query: 741 NNRP---AAKPRGREAQPAGNSAMMDALAAAMGKKR 773 NRP AAKPRGR+AQPAGNSAMMDALAAAMGKKR Sbjct: 61 GNRPASKAAKPRGRDAQPAGNSAMMDALAAAMGKKR 96 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 62/233 (26%), Positives = 99/233 (42%), Gaps = 16/233 (6%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSR-LGPKAFEQCAG---FLRINHGDNPLDASTVHPEA 572 AQ + D+ + R L L K +Q G R+ D + E Sbjct: 114 AQQMYKPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAFE-----VEV 168 Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DP 629 V L A + ++ + + + + + D G P + +I+ K R Sbjct: 169 LEKVRGGLVAQVEGIRAFL--PASQVDTRRVNDLDPYVGKPLMVKLIELNRKRNRVIISH 226 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 R + + +T+ L PG EG V +T+FG FV++G DGLVH S L+ Sbjct: 227 RAILEAQKAKAREQTIGKLVPGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFN 285 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQN 741 P VVK GD V+V+V++VD R+RI L+M+ L + P E + +R + Sbjct: 286 HPRDVVKVGDKVQVQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRG 338 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 3/111 (2%) Query: 625 PGRDPRPEFKTAQFADGVE-TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 GR+ + D E + G + G VTN+TNFGAFV++ +GLVH+S + Sbjct: 306 EGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGLEGLVHVSEM 365 Query: 684 SN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARR 732 S K V P+ V+K GD V+ +L +D + +RI+L +R + P R Sbjct: 366 SWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDR 416 Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 52/106 (49%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V +I ++ R + + PG ++G +T +T+FG F++I Sbjct: 384 VEAVILRIDPKERRISLGIRQTTDDPWSALPDRYPPGTPVKGKITGMTDFGVFMEIEEGI 443 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GL+HIS L + V +P + K GD ++ +L +D +R +L+ R Sbjct: 444 EGLIHISELDTQRVNNPADLFKKGDEIEAVILNIDPVEQRASLSRR 489 Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 3/131 (2%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 R+ A + + G I++G V + G VD+G +G++ ++ Sbjct: 44 STDEREYPAMTMEDVLASEAQEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQ 103 Query: 683 LSNKFV--EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERP 739 + ++ V E + K GD ++ V+ VDL +I L+ + D+ G R + Sbjct: 104 IGDEPVTLEQAQQMYKPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEA 163 Query: 740 QNNRPAAKPRG 750 K RG Sbjct: 164 FEVEVLEKVRG 174 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 41/117 (35%), Positives = 59/117 (50%), Gaps = 7/117 (5%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQF-------ADGVETMNDLQPGMILEGAVTNVTN 663 V ++ E+E + PE + V+ N++ G V ++T Sbjct: 513 HPSEVVNVGDEIEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITK 572 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 FGAFV I DGLVHIS +SN+ V V+K GD V+VK+ VD RKRI+L+M+ Sbjct: 573 FGAFVRIMPGIDGLVHISEISNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMK 629 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E +++ G +G V ++T++GAFVDIG DGL HIS LS ++ P VV GD ++ Sbjct: 467 EFWANVEVGKKYQGVVKSLTSYGAFVDIG-GVDGLCHISELSWSNIKHPSEVVNVGDEIE 525 Query: 703 VKVLEVDLQRKRIALTMRLDEQ-PG 726 V V D + ++++L + +E P Sbjct: 526 VYVKSYDPENQKVSLGYKKEEDNPW 550 Score = 43.8 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 1/142 (0%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 ++ A A+ + + L ++ G T + II+E+ + + + + Sbjct: 229 QVAARHTTAINVETADELDPAWLAGAETVGVTAGASTPSSIIEEVLNSMSEEIRDDMSFE 288 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVK 696 L G I++ V +V+ V I G G+V + +S+ +VK Sbjct: 289 EMLAASEAKPLYAGKIVKAKVISVSPTECVVGIDGSKHTGVVTLREMSHDPNAKMEDLVK 348 Query: 697 AGDIVKVKVLEVDLQRKRIALT 718 D + + V++ + Q L+ Sbjct: 349 VDDELDLVVVKTNDQEGVDTLS 370 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 37/152 (24%), Positives = 68/152 (44%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 T+ I L +K + + G +EG + + +GAF+++ Sbjct: 544 TINVKILSLNPEKGKISLGYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEPG 603 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 DGL+HIS +S+ VE+ ++V+ GD V+ K+LE+D R+RI+L+++ P E Sbjct: 604 LDGLIHISEISHSRVENINSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQAPEAE 663 Query: 734 GGNERPQNNRPAAKPRGREAQPAGNSAMMDAL 765 + + A P+ N + +A Sbjct: 664 EKAKEEEKPADEAAPQQEVTIEEANEGVAEAE 695 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 3/139 (2%) Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 S + +++F V V ++ K+ +K + + E + LQ G I+ Sbjct: 416 ERGYVEDLSKYLNQEFEV-RVIEMNKQRKKVVVSRKAVLEEQNARKREELLASLQEGQIV 474 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 +G V +TNFGAFVD+G DGL+HIS +S + P VVK GD ++V VL+VD Q ++ Sbjct: 475 KGIVRRITNFGAFVDLG-GLDGLLHISEMSWHRINHPQEVVKVGDELEVMVLKVDTQNEK 533 Query: 715 IALTMR-LDEQPGETNARR 732 I+L ++ + P + + Sbjct: 534 ISLGLKQVLPNPWDNVEEK 552 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 5/158 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ +++ K G I V + FGAFV + Sbjct: 520 LEVMVLKVDTQNEKISLGLKQVLPNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGV 579 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GLVHIS L+++ VE P VVK G+ V+VKVL +D KR+ L++R E GE RR Sbjct: 580 EGLVHISHLADRHVEKPEDVVKEGEEVQVKVLSMDPSEKRVRLSIR--EVNGE---RRSA 634 Query: 735 GNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKK 772 RP+ + P + D +K Sbjct: 635 REARPRKQEEVQEQNVMNETPEEKITLGDVFGDMFKEK 672 Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 1/142 (0%) Query: 578 RILAATQQALKDLMGNSSELRNLKAS-DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 +I T + + + G T II+E++K + Sbjct: 224 KICQETGTPTYHVESARELRKEWFLGHEIVGLTAGASTPDAIIEEVKKRMNEMDQMTNGE 283 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + + Q G +++G V V VDI +G++ ++ V++ +VK Sbjct: 284 EGMSEAMEVKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVK 343 Query: 697 AGDIVKVKVLEVDLQRKRIALT 718 GD ++ V++ + +I L+ Sbjct: 344 VGDEIECVVIKAEDNEGKIILS 365 Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 6/125 (4%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 K G +IK + G+ + + ++ G I++G V V G V Sbjct: 343 KVGDEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGMLV 402 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPG 726 D+G + S + +VED + +V+V+E++ QRK++ ++ + L+EQ Sbjct: 403 DVG--VRAFLPASLVERGYVEDLSKYLN--QEFEVRVIEMNKQRKKVVVSRKAVLEEQNA 458 Query: 727 ETNAR 731 Sbjct: 459 RKREE 463 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 2/114 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ ++++ K + V G + G V N+T+FGAFV+I Sbjct: 367 IEAVVLKVDETEEKISLGMKQTEQDPWVILPLKYPVGTRINGKVRNLTSFGAFVEIEPGI 426 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPG 726 DGL+HIS +S K V+ P VVK GD V V +L +D + KRI+L ++ +E P Sbjct: 427 DGLIHISDMSWTKRVQHPSEVVKKGDAVDVVILNIDSENKRISLGLKQAEEDPW 480 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 23/162 (14%) Query: 587 LKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 + +L+G E + +K + + + +I E E+ G+ + M Sbjct: 183 IDELLGQKYEFKIIKLNK---RRRNIVVSRRVILETERAGKRE-------------KLMK 226 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +L + +G V N+T+FGAF+D+G DGL+HI+ +S + P +V+ G +++KVL Sbjct: 227 ELAKDQVRKGVVKNITDFGAFIDLG-GVDGLLHITDMSWGRISHPSEMVQIGMELEIKVL 285 Query: 707 EVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAK 747 ++D +R+RI+L ++ L P + A + P R + K Sbjct: 286 DIDWERERISLGLKQLQSYPWKDVAAK-----YPVGTRVSGK 322 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 9/125 (7%) Query: 611 GVPTVTDIIKELEKPGRDPRPEF-------KTAQFADGVETMNDLQPGMILEGAVTNVTN 663 + I ELE D E K Q + G + G V ++TN Sbjct: 269 HPSEMVQIGMELEIKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITN 328 Query: 664 FGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL- 721 +GAF+++ +GLVHIS +S V P +V G+ ++ VL+VD ++I+L M+ Sbjct: 329 YGAFIELEPGIEGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQT 388 Query: 722 DEQPG 726 ++ P Sbjct: 389 EQDPW 393 Score = 64.2 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 4/129 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V +I ++ + K A+ + G L G V + + G VD+G Sbjct: 454 VDVVILNIDSENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGNDI 513 Query: 675 DGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL---TMRLDEQPGETNA 730 +G V +S L+ V +P ++VLEVD +RI L ++ ++ P Sbjct: 514 EGFVPVSQLNPEGTVTNPADFTYEAMNFVMRVLEVDPIHRRIVLAVTSIPEEQPPKPAEP 573 Query: 731 RRGGGNERP 739 + +E Sbjct: 574 SKVHSSEDE 582 Score = 44.6 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 4/133 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVE-TMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V +++ LE K A F E + +EG + G VD+ Sbjct: 107 VEVLLEHLEDQEGSVVLSKKKADFMRVWERIRVAYESDQPVEGTLVKKIKGGVVVDLM-G 165 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 D + S ++ + V + ++ G + K+++++ +R+ I ++ R+ + R Sbjct: 166 VDAFLPGSQIALRRVPNIDELL--GQKYEFKIIKLNKRRRNIVVSRRVILETERAGKREK 223 Query: 734 GGNERPQNNRPAA 746 E ++ Sbjct: 224 LMKELAKDQVRKG 236 >UniRef50_B9QA08 Suppressor of ty, putative n=3 Tax=Toxoplasma gondii RepID=B9QA08_TOXGO Length = 3132 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 71/368 (19%), Positives = 119/368 (32%), Gaps = 105/368 (28%) Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPD-LDVSLRGAVSIARRLQD 452 ER ++K+ + + + ++++ S+ A Q L +S+AR LQD Sbjct: 2138 KERVVPKLKKKEQPLFLELASL--EVPTIWAGSDKAPQVLRQKLAKEGLMCLSLARTLQD 2195 Query: 453 PLAELVKID-------PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA---- 501 PLAEL + + + Q V +L L+ V+ V VGV+L A Sbjct: 2196 PLAELAGLWSEGRENSLLQLKLHPLQKLVPSDRLQSALERVLLTSVGKVGVELKRALRGS 2255 Query: 502 --------SVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS------------- 540 + LL V GL A ++ + R QL + Sbjct: 2256 TAALGGNPTAALLQFVPGLGPRKAARLLGMFKTSTLLM-RSQLCTPNDGSTSDSDGGRGD 2314 Query: 541 -------------------RLGPKAFEQCAGFLRI------NHGDNPLDASTVHP-EAYP 574 LG K + C FLR+ + LD + +HP E Sbjct: 2315 LDDFYPPHSQSEKRHAQPVGLGRKVYLNCVSFLRLKNKTSDPESVDALDDTRIHPLEGRS 2374 Query: 575 VVERILAAT-------------------------------QQALKDLMGNSSELRNLKAS 603 V +I + A+ ++ + L ++ Sbjct: 2375 FVAKICRDAVAEKDEAHQTEEEEENGDTGGARRRDEDVDDEDAIVEVFRKPALLDDMDLE 2434 Query: 604 DFT-------DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPG 651 F+ D+ +P + I EL P RDPR F++A + E ++ PG Sbjct: 2435 AFSQMLAETKDQARCLPYLEFITSELRHPYRDPRLPFESASEMEVFFWAIGEDADEFHPG 2494 Query: 652 MILEGAVT 659 + V Sbjct: 2495 SSVSCQVV 2502 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQ 649 +S + + DF D + T+T + E E R +T + + +++++ Sbjct: 191 ASLVEDHFVEDFAD--YKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIK 248 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G ++EG V + NFGAFVDIG DGLVHIS +S K + P V++ G V VKV+ +D Sbjct: 249 EGDVIEGTVQRLANFGAFVDIG-GVDGLVHISQISYKHIATPQEVLEEGQKVTVKVIGID 307 Query: 710 LQRKRIALTMRLD-EQPGETNARRGG 734 + +RI+L+++ P + + Sbjct: 308 PENERISLSIKATLPGPWDGITEKAQ 333 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDG 676 + ELE P + + + G + G VT+V + +V I G DG Sbjct: 45 VASELEIPKIRLTNGGLHMSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDG 104 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 +V IS LSN VE VV GD + + V +V+ Sbjct: 105 VVPISELSNIHVETASDVVSVGDTLDLIVTKVEDD 139 Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 5/139 (3%) Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 SEL N+ +D T+ I+ ++E A+ A + + G + Sbjct: 109 SELSNIHVETASDVVSVGDTLDLIVTKVEDDILVLSKRKVDAEKASD-DIKAKFESGEVF 167 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 E V++V G VD+G V S + + FVED G + KV+E + + R Sbjct: 168 EAVVSDVVKGGLVVDLG--VRAFVPASLVEDHFVEDFADY--KGTTLTFKVVEFEPENNR 223 Query: 715 IALTMRLDEQPGETNARRG 733 + L+ R + + + ++ Sbjct: 224 VILSHRAVVETEKASQKQA 242 >UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S9_9BACT Length = 518 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 46/221 (20%), Positives = 86/221 (38%), Gaps = 11/221 (4%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 + + + + +R+ LL + F + + LD + + + Sbjct: 171 VRLLEMDKRKRRLVLSRRSLLDEDLSAKR-----EKFYSEVNVGDVLDGTVSSVTTFGLF 225 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 D + + SE+ ++S + V + ++K + A Sbjct: 226 ------VNVGPLDGLVHVSEVSWQRSSKSRETYKKGDAVKVKVIGIDKENNKISLSIRQA 279 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 Q M Q +G VTNVT+FGAFV++ +GL+HI LS ++ P V+ Sbjct: 280 QGNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEPGIEGLIHIGDLSWSRIKHPREVLH 339 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 G V+ VLE+D ++KR++L + P + R + Sbjct: 340 KGQEVETIVLEIDPEKKRMSLGYKQLHDPWKGIEERYTKGQ 380 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 2/145 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V I+ E++ + +K G + V + +FGAFV+I Sbjct: 344 VETIVLEIDPEKKRMSLGYKQLH-DPWKGIEERYTKGQDITVKVVRLADFGAFVEIEKGV 402 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GL+HIS LS VE P V++ G V +VLEV+ +RI L++ E GE A RG Sbjct: 403 EGLIHISQLSTHRVEKPGDVLQEGQEVTARVLEVNPAERRIRLSISAIEA-GEKAAERGK 461 Query: 735 GNERPQNNRPAAKPRGREAQPAGNS 759 + P + ++ Sbjct: 462 NSPAQGEKAPRHEGLASRSERNSKP 486 Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 30/62 (48%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++ G ++EG V T+ G VD+G +G + ++ + D + GD ++V+V Sbjct: 28 EEIARGKVIEGTVVEKTDGGWLVDVGYKCEGFLPEREWTHHILVDDKPAPEIGDKIEVQV 87 Query: 706 LE 707 Sbjct: 88 TS 89 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 8/149 (5%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQ 649 +S + DFTD + T+ I EL++ + + + E ++ L+ Sbjct: 130 ASLVEVHYVEDFTD--YKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLK 187 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G ++EG V +T+FGAFV++G DGLVHIS +S++ VE P V++ G VKVKVL VD Sbjct: 188 EGDVVEGTVQRLTDFGAFVNVG-GVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVD 246 Query: 710 LQRKRIALTMRLDEQ-PGETNARRGGGNE 737 +RI+L+++ + P E A + Sbjct: 247 ADTQRISLSIKAAQPGPWENIAGEVKAGD 275 Score = 98.9 bits (245), Expect = 7e-19, Method: Composition-based stats. Identities = 47/209 (22%), Positives = 95/209 (45%), Gaps = 12/209 (5%) Query: 513 TRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + +A IV R++N + + ++++ K ++ L+ + ++ + Sbjct: 146 GKTLAVKIVELDREKNRVILSHKAVVELELDSKK--KEAISSLK---EGDVVEGTVQRLT 200 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + + + S R + S+ ++ V + ++ + Sbjct: 201 DFGAFVNVGGVDGLV---HISQISHERVEQPSEVLEQGQK---VKVKVLSVDADTQRISL 254 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K AQ +++ G I EG V + FGAFV+I +GLVH+S ++N+ V++P Sbjct: 255 SIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEGLVHVSQIANRHVKNP 314 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 + V++ G VKVKVLEV + KRI+L+++ Sbjct: 315 NEVLEMGQEVKVKVLEVHVAEKRISLSIK 343 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 42/78 (53%) Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 + + V +LQ G ++ G+VT V V++G DG++ IS L+N +E Sbjct: 1 MVEKMNEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASD 60 Query: 694 VVKAGDIVKVKVLEVDLQ 711 VV+ I+++K+++++ Sbjct: 61 VVELDQILELKIIKLEEN 78 Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 4/82 (4%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 +E G + + V ++ N G VD+G G + S + +VED G Sbjct: 91 KAWIELQEKFTSGHVFDVTVKDIVNGGLVVDLG--VRGFIPASLVEVHYVEDFTDY--KG 146 Query: 699 DIVKVKVLEVDLQRKRIALTMR 720 + VK++E+D ++ R+ L+ + Sbjct: 147 KTLAVKIVELDREKNRVILSHK 168 >UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHT6_ANAPD Length = 686 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 31/121 (25%), Positives = 60/121 (49%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + I +L + K +N + G ++ G V N+ +FGAFV++ Sbjct: 515 IEVKILKLNQEKNRISLGRKQLLEKPFEAFVNQHEVGDVVTGKVVNLLDFGAFVEVADGV 574 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GLVH+S +S + VE P + GD ++VK++ +D +++ L+++ ++ E RR Sbjct: 575 EGLVHVSEISWEHVEKPSDELNVGDEIEVKIISIDTDEEKVGLSIKALKEAPERPERRAK 634 Query: 735 G 735 Sbjct: 635 R 635 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 31/85 (36%), Positives = 55/85 (64%), Gaps = 2/85 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +L+ G ++ G V +T+FGAFV++ DGL+H+S ++ VE P V+ GD ++VK Sbjct: 460 WEELEEGQVVTGKVARLTDFGAFVEV-NGLDGLLHVSDIAWSRVEHPSDVLNVGDEIEVK 518 Query: 705 VLEVDLQRKRIALTMR-LDEQPGET 728 +L+++ ++ RI+L + L E+P E Sbjct: 519 ILKLNQEKNRISLGRKQLLEKPFEA 543 Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 5/129 (3%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 G T +II+E+ + E D + + P I++G V +V + FVDI Sbjct: 259 GASTPDEIIEEVVSSMDEFTKEEFMNSLEDSL---KKIYPKEIVKGTVIDVKDDEVFVDI 315 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--QPGET 728 DG++ + ++ + +DP GD + V V+++D ++L+ R E + + Sbjct: 316 QFRADGIIKLDEMTEEEAKDPKNSFNVGDEIDVFVIKLDDGEGNVSLSTRRVEGMKVWKD 375 Query: 729 NARRGGGNE 737 A + +E Sbjct: 376 LAEKAENDE 384 Score = 49.2 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 7/85 (8%) Query: 640 DGVETMNDLQP----GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV 695 +G++ DL ++ G V+ G V++ +G V S ++ FV++ V Sbjct: 368 EGMKVWKDLAEKAENDELVHGVVSGFNKGGLTVNVE-GINGFVPASQIATYFVKNFKKFV 426 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR 720 G+ +K++ +D ++ R+ L+ + Sbjct: 427 --GEEWDLKIISIDERKNRLVLSRK 449 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 5/168 (2%) Query: 575 VVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFK 634 ++ RI + +L+ D G IIK +K G Sbjct: 137 IISRIKGGMTVDVGLKAFLPGSQIDLRPVRDMDRLIGQTIQVRIIKMNKKRGNIIVSRRV 196 Query: 635 TAQFADGV---ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 + TM+ L+ G ILEG V N+T++GAF+D+G DGL+HI+ +S V +P Sbjct: 197 LLEEWRDRRKKVTMDALKEGEILEGIVKNITDYGAFIDLG-GIDGLLHITDMSWGRVTNP 255 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 + GD V V VL+ D + R++L ++ L P T R R Sbjct: 256 QEFMNVGDKVNVVVLKHDKETGRVSLGLKQLTPDPWTTVGTRYPEGTR 303 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 2/118 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 T+ + ++++ R K + G ++ G + ++T+FGAFV + Sbjct: 351 TIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETKYPVGAVVSGKIKSLTDFGAFVGLDEG 410 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETN 729 DGL+HIS +S K V P V K G V+V VL+++ +R+R++L + + E P +++ Sbjct: 411 IDGLIHISDMSWTKHVRHPSEVFKKGQKVEVVVLKIEKERQRLSLGFKQVSEDPWDSD 468 Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 55/115 (47%), Gaps = 4/115 (3%) Query: 622 LEKPGRDPRPEFKTAQF--ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 L+ R Q G + V ++T++GAF++I +GL+H Sbjct: 270 LKHDKETGRVSLGLKQLTPDPWTTVGTRYPEGTRVNARVVSITDYGAFLEIEPGIEGLMH 329 Query: 680 ISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 ++ +S V+ P ++ GD ++V+VL++D + ++I+L ++ L P + + Sbjct: 330 VTEMSWNHEVKHPSKIMSVGDTIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETK 384 Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats. Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 3/155 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADG-VETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V ++ ++EK + FK + + G L+G VT V +FG FV++ Sbjct: 439 VEVVVLKIEKERQRLSLGFKQVSEDPWDSDIPSRFPVGSFLDGVVTKVMDFGFFVELAEG 498 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 +GLVH+S + + + V + G + V+V+++D ++I L+M+ A Sbjct: 499 IEGLVHVSEVDLESGQRLDQVYQPGMSLPVRVIKLDPAERKIGLSMKAVSADSPLEAAPA 558 Query: 734 GGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 + N A + + A+ G + A Sbjct: 559 VNAQPAPGN--AMEEALKSARKKGKKSTESPEENA 591 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 2/116 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ ++E+ K + +L PG + G + N+ +FGAFV+I Sbjct: 348 VEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGARVVGEIRNIASFGAFVEIKEGV 407 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 DGL+H+S +S K + P+ +VK GD V+ VL VD +++RI+L+M+ L E P ++ Sbjct: 408 DGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKEKRRISLSMKHLTEDPWDS 463 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 2/126 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + K + + G I++G V ++T++GAFV++ Sbjct: 261 VEVMVLDFNDKKERISLGMKQLKPHPWKDIAERYPEGAIVKGKVVSITDYGAFVELDSGV 320 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GL+H+S +S + V+ P ++ G V+ VL+V+ +RI+L M+ L+ P ++ Sbjct: 321 EGLIHVSEMSWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETE 380 Query: 733 GGGNER 738 R Sbjct: 381 LPPGAR 386 Score = 98.5 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 32/88 (36%), Positives = 55/88 (62%), Gaps = 2/88 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 L+ + +G V N+T+FGAF+D+G DGL+HI+ +S K + P +++ G V+V V Sbjct: 207 ETLEKNQVRKGIVKNITDFGAFIDLG-GVDGLLHITDMSYKRINHPSEMLQLGQEVEVMV 265 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARR 732 L+ + +++RI+L M+ L P + A R Sbjct: 266 LDFNDKKERISLGMKQLKPHPWKDIAER 293 Score = 78.1 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 44/102 (43%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 ++ ++K R K + ++G + + + G V++ +G Sbjct: 438 VVLAVDKEKRRISLSMKHLTEDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGF 497 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + +S L+ ++++ P K GD V V E+D ++I L++ Sbjct: 498 IPVSKLTAEYIKVPADAFKVGDEVPAVVTEIDQNNRKIYLSV 539 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 73/138 (52%), Gaps = 3/138 (2%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 S + E+ + + + + K + + Q +TM + G I++G V Sbjct: 451 DLSKYVGEELRLKPIE-LDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKR 509 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +T+FGAF+DIG DGL HIS +S+ ++ P + ++ G+ VKVKVL +D + +RI+L+++ Sbjct: 510 LTDFGAFIDIG-GIDGLCHISQISHSRIDHPESELETGENVKVKVLSLDPENERISLSIK 568 Query: 721 -LDEQPGETNARRGGGNE 737 P ET ++ + Sbjct: 569 EAQPDPFETFMKQYKSGD 586 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 59/135 (43%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 V + L+ K AQ M + G I++G V NFGAF++I Sbjct: 547 ENVKVKVLSLDPENERISLSIKEAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITP 606 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 +GL HIS LS+ V VV GD V VK+L +D Q+K+++L+++ + + + Sbjct: 607 GVEGLCHISQLSDDHVAKTQDVVNEGDQVTVKILSIDDQQKKVSLSIKEAQGKSKKEQEQ 666 Query: 733 GGGNERPQNNRPAAK 747 + + Sbjct: 667 EEFAKYQDSQEEEEG 681 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 2/133 (1%) Query: 620 KELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 + L + E + ++ + L G +++G V VT A +D+G +G V Sbjct: 295 ENLNTNSDESTQESQDELMKATEDSADKLDRGQVVKGKVVKVTEDEAMIDVGYKFEGSVP 354 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNE 737 ++ + K E ++ GD + VKV++VD + ++ L+ + ++ E + +E Sbjct: 355 VNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKWADKDKQWEQLEQLMENDE 414 Query: 738 RPQNNRPAAKPRG 750 + G Sbjct: 415 EIKAQVTEEVKGG 427 >UniRef50_A9B5U0 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5U0_HERA2 Length = 501 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 8/166 (4%) Query: 575 VVERILAATQQALKDLMGNSSELRNLKASDFTDEK-FGVPTVTDIIKELEKPGRDPRPEF 633 V++++ ++ + ++ +E++ + + + ++ + + G D E Sbjct: 21 VLQKLADKAREVVAEVKEELAEVKEEIGEALAEAREKASEVLAEVKERVGLGGDDEATEE 80 Query: 634 KTAQFADGVETM-------NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 A F + DL GM L+G VT+ +G FVDIGV +DGLVHIS +S++ Sbjct: 81 AGATFEPSGDEDGTTPRRLADLHAGMELDGKVTSTALYGVFVDIGVGRDGLVHISEMSDQ 140 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 +E P VV+ GDIVKV+V VD +RI+LTMR G A + Sbjct: 141 RIESPTDVVQIGDIVKVRVKSVDPDARRISLTMRSPRSEGRRRAPK 186 Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 36/91 (39%), Positives = 52/91 (57%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 +L+PG +++G V + FG FVDIGV +DGLVHIS LS VE V G +VL Sbjct: 197 ELKPGDLVDGTVNGIAPFGVFVDIGVGKDGLVHISELSENRVEKAEDAVTVGQSYTFRVL 256 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 EVD +RI+L++R ++ + + E Sbjct: 257 EVDTGAQRISLSLRRAKEDFQERPKAPRRRE 287 Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats. Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 2/110 (1%) Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 I L + D + K + + ++ + PG +L+G V+ + FGAFVD+GV +D Sbjct: 263 QRISLSLRRAKEDFQERPKAPRRRE--VNLDVIAPGTVLDGKVSGIAPFGAFVDLGVGRD 320 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 GLVHIS LS V VVK GD VKV+VLEVD KRI+LTMR++E P Sbjct: 321 GLVHISELSEGRVGKVDDVVKVGDPVKVRVLEVDPDSKRISLTMRVEEAP 370 >UniRef50_UPI0001910907 putative transcription accessory protein n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-2068 RepID=UPI0001910907 Length = 119 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 74/82 (90%), Positives = 77/82 (93%) Query: 339 GVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 GVKVAVVD TGKLVATDTIYPHTGQAAKAA +AALCEK++VELVAIGNGTASRETERFY Sbjct: 1 GVKVAVVDGTGKLVATDTIYPHTGQAAKAATVIAALCEKYHVELVAIGNGTASRETERFY 60 Query: 399 LDVQKQFPKVTAQKVIVSEAGA 420 LDVQKQFP VTAQKVIVSEAG Sbjct: 61 LDVQKQFPNVTAQKVIVSEAGG 82 >UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTZ3_DESOH Length = 492 Score = 106 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 9/219 (4%) Query: 520 IVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 ++ + G+ NR++LL+ + EQ FL + +D V Y Sbjct: 171 LIERIEARGKNLVVNRRRLLEQEQ-----AEQREKFLAQARPGDIVDGRVVRIMPYGAFM 225 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + + S + + E V + + G K A Sbjct: 226 ELQPGVEGMVHISELSWSRVGDPSEVTAVGEVLPVRILAIDRTGSKTGGLKISLSAKQAA 285 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + G +EG VT +FGAFV++ +GLVHIS +S+ + V V + Sbjct: 286 VDPWKTVGEKYKEGDKIEGKVTRCADFGAFVEVEPGIEGLVHISEMSHTRRVVKAEDVAR 345 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGG 734 GD V V V VD +R++L+++ E P T A R Sbjct: 346 PGDRVAVMVTSVDPVNRRLSLSIKAAEGDPWLTVANRMA 384 Score = 92.7 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDL----QPGMILEGAVTNVTNFGAFVDIGVH 673 +I+ +E G++ + + E +PG I++G V + +GAF+++ Sbjct: 171 LIERIEARGKNLVVNRRRLLEQEQAEQREKFLAQARPGDIVDGRVVRIMPYGAFMELQPG 230 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK-----RIALTMRLDE-QPGE 727 +G+VHIS LS V DP V G+++ V++L +D +I+L+ + P + Sbjct: 231 VEGMVHISELSWSRVGDPSEVTAVGEVLPVRILAIDRTGSKTGGLKISLSAKQAAVDPWK 290 Query: 728 TNARRGGGNER 738 T + ++ Sbjct: 291 TVGEKYKEGDK 301 Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 2/125 (1%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 ++ ++ R K A+ + N + G + G V V +FG F+ + GL Sbjct: 353 MVTSVDPVNRRLSLSIKAAEGDPWLTVANRMAVGQTVSGTVERVLDFGCFISLAPGVTGL 412 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 + SS+ +KA D V VK+ ++L K+I+L + G ++ ++ GNE Sbjct: 413 MPRSSMERAADPKAMEKLKADDPVTVKIETINLADKKISLAP--ADAEGASDWKQYTGNE 470 Query: 738 RPQNN 742 Q Sbjct: 471 PRQAG 475 >UniRef50_B8I046 RNA binding S1 domain protein n=13 Tax=Clostridia RepID=B8I046_CLOCE Length = 144 Score = 106 bits (266), Expect = 3e-21, Method: Composition-based stats. Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 9/122 (7%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ G I+EG VT +T FGAFV + + GLVHIS ++ ++V+D +K IVKVK+L Sbjct: 3 LEVGKIVEGKVTGITAFGAFVQLPEGKTGLVHISEVAQEYVKDVSAHLKENQIVKVKILS 62 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 VD +++L+++ A GG P+ PA + N + D LA Sbjct: 63 VDT-NGKVSLSIK--------KAMAGGPTTVPKFRPPAEVDWNAGKNNSVNVSFEDRLAK 113 Query: 768 AM 769 M Sbjct: 114 FM 115 >UniRef50_B8J034 RNA binding S1 domain protein n=2 Tax=Desulfovibrio RepID=B8J034_DESDA Length = 489 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 +K K A+ + L+ G +++G V + FGAFV+I +GLVHIS Sbjct: 263 DKGQVRIALSRKQAEGDPWQDVTQRLENGAVVQGKVVRLAPFGAFVEILPGIEGLVHISE 322 Query: 683 LSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARR 732 LS K V P +++ GDIV VK+ E++ +RI+L++R E P + A++ Sbjct: 323 LSWTKRVNKPEEILQVGDIVAVKIKEINADSRRISLSLRDAEGDPWQDAAQQ 374 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 8/139 (5%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN----DLQPGMILEGA 657 AS E T+ ++ +E GR+ + + E + L G +EG Sbjct: 149 ASAEDAETLTGRTLQFLVIRVENRGRNIVVSRRALLDRERQEQLEALLEKLGVGDTVEGK 208 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV---DLQRKR 714 ++ FGAF+++ +G++H+S LS V P V GD V+ KVL + D + R Sbjct: 209 ISRFAPFGAFMELDTAVEGMIHLSELSWSRVGAPDEAVSLGDTVRAKVLSISKSDKGQVR 268 Query: 715 IALTMRLDE-QPGETNARR 732 IAL+ + E P + +R Sbjct: 269 IALSRKQAEGDPWQDVTQR 287 Score = 66.9 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 7/125 (5%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 IKE+ R + A+ + PG I++G V + +G F+ + GL+ Sbjct: 346 IKEINADSRRISLSLRDAEGDPWQDAAQQFAPGSIVQGIVEGRSTYGLFITLAPGITGLL 405 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL-------TMRLDEQPGETNAR 731 + N ++ + GD V + V +D +RI+L + D++ + +A Sbjct: 406 PAGIIKNAKNAGQYSKLDKGDSVTLVVQNLDTAARRISLAPEGSEASFSADDKAWKQHAS 465 Query: 732 RGGGN 736 +G G+ Sbjct: 466 KGSGS 470 Score = 52.3 bits (124), Expect = 8e-05, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 6/124 (4%) Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 ++ E A A + + LQ G + G V +T FVD+G+ DG I + Sbjct: 11 QEEGVEDFAAMLAAHETSGHRLQAGQKVTGTVIAITGDSVFVDVGIKVDG---IMERKDI 67 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAA 746 D G+ V+ V+ V Q R++ +M AR P + R A Sbjct: 68 LDADGKETTAPGEPVEAWVIGVSAQEIRLSRSMSGSGVAALEEARDAA---LPVDGRIAG 124 Query: 747 KPRG 750 +G Sbjct: 125 SCKG 128 >UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE33_THEAB Length = 811 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 82/220 (37%), Gaps = 16/220 (7%) Query: 516 MAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF--EQCAGFLRINHGDNPLDASTVHPEAY 573 + I+ + + + L KAF EQ F + ++ E + Sbjct: 415 LEFKIIKFEERGKRLN--------IILSRKAFINEQKEKFFNERKEGDIIEGIVKKIEKF 466 Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 RI L + S +LK D E +V IK+++K R Sbjct: 467 GAFVRIFEGIDGLLPN--SEVSYDTSLKVEDVLSEG---QSVKLYIKKIDKENRKILLSL 521 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K + G I+ G V N+ ++G +V++ DGLVHI + Sbjct: 522 KELMPDPWQNVTKKYKVGDIVSGKVKNILSYGFYVNLEPGVDGLVHIDDIFWGRRGKISD 581 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARR 732 +V GDIVKV + E+D K++ L+ + E P E + Sbjct: 582 IVSVGDIVKVMIKEIDPNNKKMRLSYKEVEGDPWENIEEK 621 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 1/119 (0%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V +IKE++ + R +K + G + G V+ + + G V+I Sbjct: 588 IVKVMIKEIDPNNKKMRLSYKEVEGDPWENIEEKYPVGNTITGTVSFILDKGVIVEIERG 647 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 G IS +S ++ V+ G VK + E+D + +++ L+++ + E P + Sbjct: 648 ISGFCPISEISWNYISSVKDVLNEGQKVKAVITELDKENRKMRLSIKRVQENPWKKFKD 706 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 2/88 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 L+PG + G VT++ +FGAFVDIG DGLVH+S LS V+ P V+K GD V V + Sbjct: 229 EKLEPGAVRTGRVTSLCDFGAFVDIG-GADGLVHLSELSWSRVKHPEEVLKVGDAVSVYI 287 Query: 706 LEVDLQRKRIALTMRLDE-QPGETNARR 732 L VD +KRIAL+++ + +P T R Sbjct: 288 LSVDEDKKRIALSIKRTQAEPWTTVTDR 315 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 53/102 (51%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I +++ + K Q + Q G + G VT +T FGAFV + +GL+ Sbjct: 287 ILSVDEDKKRIALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAFVRLEDGIEGLI 346 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 HIS +S++ ++ P V+ GD V +++ +D RKRI L+ R Sbjct: 347 HISEMSDERIQHPRDVINEGDSVSARIIRIDPTRKRIGLSTR 388 Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 1/92 (1%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 D D +L+ G ++G + V VDIG +G+V +++ Sbjct: 31 DDDRALLEEYLRDPAHDYRNLKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGREMTS-L 89 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + +K GD++ V V++ + RI L++ Sbjct: 90 SSEERAELKVGDVLLVTVVQTEDAEGRIVLSI 121 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 8/149 (5%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQ 649 +S + DF+D K TV + EL++ R + Q E ++ L+ Sbjct: 134 ASLVEPHYVEDFSDYKGKTLTVKVV--ELDREKNRVILSHRAVVEEEQERQQKELLSRLE 191 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G +L+G V + +FG FVD+G DGLVHIS LS+ V P VVK GD VKVKVL VD Sbjct: 192 AGQVLDGVVRRIADFGVFVDVG-GFDGLVHISQLSHTRVAHPSEVVKEGDAVKVKVLAVD 250 Query: 710 LQRKRIALTMRLD-EQPGETNARRGGGNE 737 ++ R++L+++ P E + + ++ Sbjct: 251 PEQGRLSLSIKEALPGPWEGISEKVKPSD 279 Score = 96.2 bits (238), Expect = 5e-18, Method: Composition-based stats. Identities = 31/81 (38%), Positives = 50/81 (61%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 ++P ++ G V + +FGAFV+I +GLVH+S ++N+ + PH V+K GD Sbjct: 267 PWEGISEKVKPSDVVTGTVKRLASFGAFVEIFPGVEGLVHVSQIANRRIGSPHEVLKEGD 326 Query: 700 IVKVKVLEVDLQRKRIALTMR 720 VK KVL+V+ RI+L++R Sbjct: 327 EVKAKVLDVNEAEHRISLSIR 347 Score = 59.2 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%) Query: 650 PGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 I+ G V + + V++ Q G++ IS LSN +E P V GD V KV +V Sbjct: 14 VDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTAKVKKV 73 Query: 709 ----DLQRKRIALTMRL--DEQPGETNARRGGGNE 737 D + + L+ + E+ E R+ E Sbjct: 74 EEGKDGEEGLLILSKKAVDAERAWEELERKFASGE 108 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 4/82 (4%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 E G E V ++ G D+G G + S + +VED G Sbjct: 95 RAWEELERKFASGETFETVVKDIVKGGLVADVG--VRGFIPASLVEPHYVEDFSDY--KG 150 Query: 699 DIVKVKVLEVDLQRKRIALTMR 720 + VKV+E+D ++ R+ L+ R Sbjct: 151 KTLTVKVVELDREKNRVILSHR 172 >UniRef50_Q7UWH7 30S ribosomal protein S1 n=1 Tax=Rhodopirellula baltica RepID=Q7UWH7_RHOBA Length = 560 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 2/89 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + ++PG ILEG V +V +FGAFVD+G DGL+H+S LS + ++ P V++ G VK Sbjct: 347 EQLEKIEPGDILEGVVRSVRDFGAFVDVG-GLDGLIHVSKLSWERIKHPSEVIEEGQNVK 405 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNA 730 V+V ++D Q +++LT R L E P ++ Sbjct: 406 VRVDKIDKQTGKMSLTYRDLLENPWDSAE 434 Score = 78.5 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 34/147 (23%), Positives = 54/147 (36%), Gaps = 5/147 (3%) Query: 628 DPRPEFKTAQFADGVETMND-----LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 D + + + D +E D G + +G VT FGAFV + +GL HIS Sbjct: 412 DKQTGKMSLTYRDLLENPWDSAESMFAVGSVHKGEVTRTAEFGAFVRLTAGVEGLCHISE 471 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 L+ V +VV GD V VK++ D +++ L+++ + E Sbjct: 472 LATHRVSRVSSVVNVGDEVDVKIMSFDRDSQKVGLSIKAAHAKPAAEGEKQVEEEVEPPR 531 Query: 743 RPAAKPRGREAQPAGNSAMMDALAAAM 769 A K GN + Sbjct: 532 ELAVKASHSGPLKGGNDRPSGGEKFGL 558 Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 5/129 (3%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 ++ I++ + D A V +D+ G ++E +T N G +G Sbjct: 233 SIEVIVRGINS--EDGLFSCSLPGKATEVSDWDDIDEGSVVEATITGHNNGGLECKVGS- 289 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G + IS +S VED V + V E + +R + L+ R + R+ Sbjct: 290 VRGFMPISQISEYRVEDCSEFV--DQKMVCLVTEANARRGNLVLSRRAILEREREVKRQE 347 Query: 734 GGNERPQNN 742 + + Sbjct: 348 QLEKIEPGD 356 >UniRef50_P80870 General stress protein 13 n=12 Tax=Bacillales RepID=GS13_BACSU Length = 130 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 58/104 (55%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 + G + G VT + +GAFV + GLVHIS +++ FV+D + + GD V+VKVL Sbjct: 4 KFEVGSVYTGKVTGLQAYGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVL 63 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 VD ++ +I+L++R + E + + Q + A+ P+G Sbjct: 64 AVDEEKGKISLSIRATQAAPEKKESKPRKPKAAQVSEEASTPQG 107 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 100/279 (35%), Gaps = 30/279 (10%) Query: 485 AVVEDCVNAVGVDLNT--------ASVPLLTRVAGLTRMMAQNI------VAWRDENGQF 530 V + N G+++N AS L V L + Q + V + N Sbjct: 284 ECVVNKSNKGGLEVNVGSLRGFLPASQVDLYFVGDLEPFVGQKLTVQITEVNPKKRNLVV 343 Query: 531 QNRQQL-LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 R+ L + + + +E+ A + + + Y + Sbjct: 344 SRRKYLESEREEIQKELWEKLA-------IGQEHTGTVKNIKDYGAFVDLGGIDGFL--- 393 Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 +G S R D E + I +++K K Q + Sbjct: 394 HIGEISWNRIKHPKDALSEHQQ---INVKILKIDKEKNRISLGMKQLQQDPWQSAEDRYA 450 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G VT T+FGAF+++ +GL+HIS L ++ V+ V+ G KVLEVD Sbjct: 451 TGSTISGKVTRTTDFGAFIELEPGLEGLIHISELDHRRVKRVTEVLTTGQETSAKVLEVD 510 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 RKRI+L+++ E A ++P R P Sbjct: 511 PNRKRISLSIKALIDKPE--AAEAPVEDQPSYERKRKGP 547 Score = 43.8 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 14/138 (10%) Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFK-TAQFADGVET 644 A+ DL G+ S ++ T++D +E+ + T G Sbjct: 136 AVDDLDGDLEAELAAALSGQGAQEL-PKTLSD--EEIAAEAKSEDATAPATPATKSGAAA 192 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGV---HQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + G L+G V ++ N F+D+G G+V + K G V Sbjct: 193 EEGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV-------IGQEV 245 Query: 702 KVKVLEVDLQRKRIALTM 719 VKV V I L++ Sbjct: 246 DVKVTSVKEAEGLIQLSL 263 >UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=candidate division TM7 RepID=UPI00016B22D3 Length = 358 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 6/180 (3%) Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y V L +Q + + S ++ + T+ I + ++ Sbjct: 124 EYEGVRGFLPVSQLSAEHYPRVGSSDKDEILQRLNN--LIGKTMKVRILDADRKSNKLIF 181 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K A E L G +EG VT V +FG FV++ +GLVHIS +S + V +P Sbjct: 182 SEKEAVKDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNVE-GIEGLVHISEISWERVNNP 240 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 VK G +K K++ +D R++L+M+ L + P T + ++ + P G Sbjct: 241 SDYVKTGQTIKAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFG 298 Score = 82.7 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 2/127 (1%) Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 + SE+ + ++ +D T+ I ++K K + + + G Sbjct: 228 HISEISWERVNNPSDYVKTGQTIKAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGD 285 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 +EG VT +T FGAFV + + LVHIS L + DP V + + +L++D + Sbjct: 286 KVEGTVTRITPFGAFVQVSPAIEALVHISELGDSNNVDPEKVFTLNERKEFVILDIDKEN 345 Query: 713 KRIALTM 719 ++I+L++ Sbjct: 346 RKISLSL 352 Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 8/96 (8%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 + L G ++ G V ++ +D+G G V + + GD V Sbjct: 18 SAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRN------ISEGDEVSA 71 Query: 704 KVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNE 737 V++ +L+ L++R + ++ E + R E Sbjct: 72 SVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGE 107 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 2/95 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + L G ++EG V +TNFGAFVDIG DGLVH+S LS++ V+ P VV G+ V Sbjct: 186 ELLESLNEGDVIEGKVARLTNFGAFVDIG-GVDGLVHVSELSHEHVKSPEDVVSIGETVN 244 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 VK+ VD +RI+L+++ D P + +G NE Sbjct: 245 VKIKSVDKDSERISLSIK-DTLPSPFESIKGEFNE 278 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/108 (33%), Positives = 57/108 (52%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 TV IK ++K K + + G ++EG V + NFGAFV+I Sbjct: 241 ETVNVKIKSVDKDSERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGAFVEIKP 300 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 GLVHIS +S+ + P ++ G +V VKVL VD++ +RI+L+++ Sbjct: 301 GVQGLVHISEISHSHIGSPSEALEPGQVVSVKVLGVDVENERISLSIK 348 Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +ND++ G + G V + V + G +G++ IS LS +++P VK GD + Sbjct: 9 MINDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVKVGDEIG 68 Query: 703 VKVLEV--DLQRK 713 V +V D + + Sbjct: 69 AYVTKVEYDEENE 81 Score = 51.9 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 L +E VT V G VD+G Q G V S +S F+ED G ++K+K Sbjct: 102 QEQLDNNQTIEAKVTEVVKGGLVVDVG--QRGFVPASLISTDFIEDFSDF--EGQVLKLK 157 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNAR 731 V E+D R+ L+ + E + Sbjct: 158 VEELDPANNRVILSRKAVEALENAEKK 184 >UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2Q3_DESHD Length = 661 Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 6/131 (4%) Query: 609 KFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 +F T+ + E + R + + Q A + LQ G ++ G V + F Sbjct: 425 QFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVVKRLAQF 484 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDE 723 GAFVDIG DGL+H+S ++ ++ P V GD V+V++L+VD ++ +I+L ++ L Sbjct: 485 GAFVDIG-GVDGLLHVSDIAYTRIKHPSEYVNVGDEVEVQILKVDKEQGKISLGLKQLKP 543 Query: 724 QPGETNARRGG 734 P E+ + Sbjct: 544 SPWESAPEKYA 554 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%) Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 + + + R S++ + G I+K ++K K + + Sbjct: 498 HVSDIAYTRIKHPSEYVN--VGDEVEVQILK-VDKEQGKISLGLKQLKPSPWESAPEKYA 554 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G ++ G V + FGAFV + D L+HIS LS K V VVK GD+V+ KV+E Sbjct: 555 LGSLVTGKVVRIAPFGAFVQLEDGIDALIHISQLSEKRVNKVEDVVKVGDMVQAKVIECK 614 Query: 710 LQRKRIALTMR 720 + KRI+L++R Sbjct: 615 PEEKRISLSIR 625 Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 51/107 (47%), Gaps = 5/107 (4%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI-LEGAVTNVTNFGAFVDIGVH 673 ++ ++ +E +P + A V+ + +L ++G V +V G VD+G Sbjct: 348 ISAVVLRVENEEGNPVLSKRRADEMAAVDKLKELAESKEEIQGKVADVVKGGLIVDVG-- 405 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 G V S + +VED + G ++++V+E D ++R+ L+ + Sbjct: 406 MRGFVPASQIQPGYVEDLNQF--KGQTLRLRVIEFDPAKRRVVLSQK 450 Score = 54.2 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 2/132 (1%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTA--QFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 G T II+E+ + + D E M +L G ++ G V + + FV Sbjct: 256 GASTPDWIIEEVYRKMSTMENKETHEMMNMEDWAEGMQNLHRGALVTGTVVKINHDEVFV 315 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 D+G +G++ + L+ +V GD + VL V+ + L+ R ++ Sbjct: 316 DLGWKSEGVIALKELTVASDLQTSDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAV 375 Query: 729 NARRGGGNERPQ 740 + + + + Sbjct: 376 DKLKELAESKEE 387 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 12/193 (6%) Query: 555 RINHGDNPLDASTVHP-EAYPVVERILAATQQALKDLMG--------NSSELRNLKASDF 605 R+ H D +H E+ + + + + G S+ F Sbjct: 92 RVEHTKGWEDLEKIHDTESLVESKVVESVKGGVIAIARGIRCFIPASQLSDRYVDDLKTF 151 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 + F + I ++ K + + + L+ GM + G V +TNFG Sbjct: 152 VGKSFNAKVIE-IDRQKNKAVLSRKEVLQQENKEKKADVFAKLEKGMQIRGEVKRLTNFG 210 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQ 724 AFVDIG DGLVHIS LS V++P VV D V+VKV++ D +++L+++ + Sbjct: 211 AFVDIG-GIDGLVHISELSWGRVKNPSEVVSVEDQVEVKVIDFDETTGKVSLSIKQTQPE 269 Query: 725 PGETNARRGGGNE 737 P A + + Sbjct: 270 PWTLIADKFKAGD 282 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 51/223 (22%), Positives = 89/223 (39%), Gaps = 15/223 (6%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPK--AFEQCAGFLRINHGDNPLDASTVHPEAYP 574 A+ I R +N +R+++L+ K F + ++I L Sbjct: 158 AKVIEIDRQKNKAVLSRKEVLQQENKEKKADVFAKLEKGMQIRGEVKRL----------- 206 Query: 575 VVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFK 634 A D + + SEL + + ++ V + + ++ K Sbjct: 207 --TNFGAFVDIGGIDGLVHISELSWGRVKNPSEVVSVEDQVEVKVIDFDETTGKVSLSIK 264 Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV 694 Q + + G ILEG V + +FGAFV++ DGLVHIS +S + P Sbjct: 265 QTQPEPWTLIADKFKAGDILEGKVVRLVDFGAFVELMPGLDGLVHISQISEAHIAKPSEE 324 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 + G V VKVL++++ KRI+L+M ++ N +E Sbjct: 325 LHVGQNVNVKVLDINIDGKRISLSMTAAQEDSTENEPTEYTDE 367 Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 37/76 (48%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 + G ++ G V V++ G V+IG DG+V +SN P V KA D + V +++ Sbjct: 20 KRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTITPQDVAKADDEISVYIIKT 79 Query: 709 DLQRKRIALTMRLDEQ 724 D + L+ + E Sbjct: 80 DDGEGNVLLSTKRVEH 95 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 7/150 (4%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND----LQ 649 + + + ++ G IIK L+ D + + + + ++ Sbjct: 154 PASRSGARDAAEMEKLVGQEIRCRIIK-LDVADEDLVVDRRAVLEEEERASKEQRYSQVK 212 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G I+ G + ++T++GAFVDIG D L+H++ +S V P V+ GD V+ K+L+VD Sbjct: 213 EGEIVHGTIRSLTDYGAFVDIG-GVDALLHVADISWGRVNKPADVLNVGDKVEAKILKVD 271 Query: 710 LQRKRIALTMR-LDEQPGETNARRGGGNER 738 +KRI+L ++ L P + A + ER Sbjct: 272 PAKKRISLGLKQLQPHPWDLVADKYKVGER 301 Score = 98.5 bits (244), Expect = 9e-19, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + D V I +++ + K Q + + G + G+VT Sbjct: 249 RVNKPADVLNVGDKVEAKILKVDPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTR 308 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 VT+FGAFV++ +GLVH+S +S K + P +VK GD V+V VL V+ +RI+L + Sbjct: 309 VTDFGAFVELEKGIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGL 368 Query: 720 RLD-EQPGETNARR 732 + P A++ Sbjct: 369 KQALGDPWADAAQK 382 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 1/108 (0%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + R K A + L G ++EG VT++ FGAFV + Sbjct: 350 VEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVTSIQKFGAFVQVAEGV 409 Query: 675 DGLVHISSLS-NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 +G+VH+ +S K + P VVK G +VK +VLE+D++++R+ L M+ Sbjct: 410 EGMVHVGDISAEKRINHPQDVVKVGQVVKAQVLELDVEKRRLRLGMKQ 457 >UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH71_THEYD Length = 534 Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 1/127 (0%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 I+ + + +K + PGM + G VT V +FG FV++ Sbjct: 252 SEYEFIVLKADTENERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVEDFGLFVELEE 311 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 +GLVH+S L + P + + + VKVL++D + ++I+L+ + L +P E A+ Sbjct: 312 GVEGLVHVSELDWIAPKHPTYYAEVDEWINVKVLDIDRENRKISLSFKQLKPKPWEVVAK 371 Query: 732 RGGGNER 738 + +R Sbjct: 372 KYKVGDR 378 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 2/110 (1%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + ++++ R FK + + G + G V +T+FG FV + DGL+ Sbjct: 344 VLDIDRENRKISLSFKQLKPKPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGVDGLI 403 Query: 679 HISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 HIS +S K ++ P + K G V +L ++ ++++++L ++ L E P Sbjct: 404 HISDISWTKHIDHPSQIFKKGQKVDAVILSLEPEKEKLSLGIKQLSEDPW 453 Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 2/95 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G+ ++G V N+TN+G FVD+G DG +HIS +S V P + G + VL+ Sbjct: 202 IKEGLKIKGTVKNITNYGVFVDLG-GLDGFLHISDISWGKVRHPSQFFEIGSEYEFIVLK 260 Query: 708 VDLQRKRIALTMRLDE-QPGETNARRGGGNERPQN 741 D + +RI L + + P E ++ + + Sbjct: 261 ADTENERITLGYKQKKADPWENIDKKYHPGMKVRG 295 Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats. Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 7/114 (6%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGV-ETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V +I LE K + E + G I V T G FVDI Sbjct: 427 VDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFKIGEIYNAKVIKKTEHGLFVDIEGI 486 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGE 727 +GLV+ S + VK GD +KV V++VD ++++I L+M+ ++ E Sbjct: 487 VEGLVYNSEIDKNR------TVKEGDEIKVIVVKVDKEKRKIGLSMKKIDENEE 534 Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 42/75 (56%), Gaps = 4/75 (5%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 +++ ++ G I++G + V N G VD+G +G++ ++ S + +++ D ++V Sbjct: 18 SLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELKNIKEA----DEIEV 73 Query: 704 KVLEVDLQRKRIALT 718 + ++D + I+L+ Sbjct: 74 FIEKIDDAQGIISLS 88 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 6/142 (4%) Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP----GMILEGAVTNV 661 E++ + + +L++ + ++ E N L G +++G + N+ Sbjct: 143 DAERYEGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRNRLLASLGDGDVVQGVIKNI 202 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR- 720 T++GAF+D+G DGL+HI+ +S + + P V+ GD + VKVL+ D + R++L ++ Sbjct: 203 TDYGAFIDLG-GLDGLLHITDISWRRIRHPSQVLSVGDRITVKVLKFDRTKTRVSLGLKQ 261 Query: 721 LDEQPGETNARRGGGNERPQNN 742 L P R R + Sbjct: 262 LHPDPWAGIIGRYPAGSRVRGR 283 Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 2/127 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 +T + + ++ K + G + G VTN+ ++G FV+I Sbjct: 240 RITVKVLKFDRTKTRVSLGLKQLHPDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERG 299 Query: 674 QDGLVHISSLSNKFVEDPH-TVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNAR 731 +GL+H+S + K + G V V VL+V R+RI+L M+ P T + Sbjct: 300 IEGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYK 359 Query: 732 RGGGNER 738 N+R Sbjct: 360 GFRKNDR 366 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 7/146 (4%) Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y + I + L + + F ++ TV D+ K R Sbjct: 289 DYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFRVGQYVNVTVLDV----SKTRRRISL 344 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K + + + + + + G VD+ + G+V +S Sbjct: 345 GMKHGTLNPWLTFYKGFRKNDRMGAIIRSPVDVGILVDLPMGVHGVV---CMSKDLRRRL 401 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIAL 717 + +G +V+ +V+ VD+ R RI+L Sbjct: 402 LRALCSGGVVEARVVGVDVNRGRISL 427 >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DPRPEFKTAQFADGVETMNDLQP 650 +L+ D G IIK +K G + + Q +T+ L Sbjct: 184 PGSQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEEQNDKKSKTLEHLNE 243 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 +L G V N+T++GAFVD+G DGL+HI+ +S + P +V+ GD ++VKVL+ D Sbjct: 244 DAVLTGTVKNLTDYGAFVDLG-GIDGLLHITDMSWGRLTHPRDLVQVGDQIQVKVLKFDR 302 Query: 711 QRKRIALTMR-LDEQPGETNARRGGGNER 738 ++R++L + L P + R R Sbjct: 303 DKQRVSLGFKQLTPDPWLDASERYPIGAR 331 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 2/116 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + R K + G ++EG V N+T+FGAF++I Sbjct: 380 VDAVVLNVNPQERRISLGLKQLETNPWESLHEKFPVGGVVEGKVRNLTDFGAFIEIEDGI 439 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 DGLVH+S+LS K V+ P V+K GD VK VL ++ +R++L ++ L ET Sbjct: 440 DGLVHVSNLSWTKRVKHPSEVLKKGDKVKAVVLAIEPDNRRLSLGVKQLQPDVWET 495 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 86/217 (39%), Gaps = 14/217 (6%) Query: 519 NIVAWRDENGQFQ-NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 I+ + G +R+Q+L+ + K + L + D L + + Y Sbjct: 207 RIIKLNKKRGNIVVSRKQILEEEQNDKK-----SKTLEHLNEDAVLTGTVKNLTDYGAFV 261 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + M D+ + + + ++ + FK Sbjct: 262 DLGGIDGLLHITDMSWGRLTHPRDLVQVGDQ------IQVKVLKFDRDKQRVSLGFKQLT 315 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 ++ G + G V +VT++GAF+++ +GLVH+S ++ K ++ P +V Sbjct: 316 PDPWLDASERYPIGARVHGRVISVTDYGAFIELEQGIEGLVHVSEMTWSKRMKHPSKIVN 375 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 GD V VL V+ Q +RI+L ++ L+ P E+ + Sbjct: 376 VGDQVDAVVLNVNPQERRISLGLKQLETNPWESLHEK 412 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ +E R K Q + G I+ G V + +FGAF++I Sbjct: 467 VKAVVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGDIIHGKVLRLASFGAFIEIADGV 526 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GL H S S++ ++ G K+++++ K++ L++R Sbjct: 527 EGLCHNSEASDEHGAPLK--LEPGQEFDFKIIKMNPDEKKVGLSLR 570 >UniRef50_Q03SZ4 RNA binding protein (S1 domain) n=105 Tax=Firmicutes RepID=Q03SZ4_LACBA Length = 181 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 2/91 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G + G V+ +TNFGAFVD+G H+ GLVHIS +S+ +V+D H V+ GD V VKVL Sbjct: 3 IEVGAKVTGKVSGITNFGAFVDLGDHKTGLVHISEISDGYVKDIHDVLSVGDEVTVKVLT 62 Query: 708 VDLQRKRIALTM-RLDEQPGETNARRGGGNE 737 V +I L++ + + P + Sbjct: 63 V-GDDGKIGLSIRKATDHPASERPHHAHNDH 92 >UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPH9_DESVM Length = 564 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 50/243 (20%), Positives = 94/243 (38%), Gaps = 15/243 (6%) Query: 518 QNIVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPV 575 Q ++ ++NG+ +R+ LL+ + E + + + L+ + + Sbjct: 197 QFLITRLEQNGRNIVVSRRMLLEREQ-----AESLSALMENVKEGDVLEGTVARLAPFGA 251 Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRD------P 629 I + + + S ++ + +K V + E K G+D Sbjct: 252 FVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKVRVKVLGIAGAEEGKGGKDSRKGPRI 311 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFV 688 + + + L IL G VT + FGAF+++ +GLVH+S +S + + Sbjct: 312 SLSIRQVSGDPWQDVADRLDADQILTGKVTRLAPFGAFIEVLPGVEGLVHLSEMSWTRRI 371 Query: 689 EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAK 747 P V G+ V V++ E+D RKR++L++R E P T R Sbjct: 372 NKPEEAVTPGETVSVRIKELDPARKRLSLSLRDAEGDPWSTVEERFPAGSTVTGTVEKRA 431 Query: 748 PRG 750 P G Sbjct: 432 PFG 434 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 16/146 (10%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVET----MNDLQPGMILEGAVTNVTN 663 + F T +I LE+ GR+ + + E+ M +++ G +LEG V + Sbjct: 189 DSFTGQTFQFLITRLEQNGRNIVVSRRMLLEREQAESLSALMENVKEGDVLEGTVARLAP 248 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV----------DLQRK 713 FGAFV+I +G+VH+S LS V+ V GD V+VKVL + D ++ Sbjct: 249 FGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDKVRVKVLGIAGAEEGKGGKDSRKG 308 Query: 714 -RIALTMR-LDEQPGETNARRGGGNE 737 RI+L++R + P + A R ++ Sbjct: 309 PRISLSIRQVSGDPWQDVADRLDADQ 334 Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 12/142 (8%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 TV+ IKEL+ + + A+ G + G V FG FV++ Sbjct: 382 ETVSVRIKELDPARKRLSLSLRDAEGDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAP 441 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 GL+ + + + + G V + V ++D++ +RI+L A Sbjct: 442 GVTGLLPNAVAATSPQSKTYAGLNPGAEVSLVVRDLDVKARRISL------------APA 489 Query: 733 GGGNERPQNNRPAAKPRGREAQ 754 E R A+P+ RE + Sbjct: 490 DATGEDDDEWRKLAQPQKREPR 511 >UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2F1_9PLAN Length = 502 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E M + G + EG V + +FGAFVD+G DGL+HIS +S ++ P ++ G V+ Sbjct: 286 ELMASIAIGDMREGVVRKIQDFGAFVDMG-GIDGLIHISQMSWDRIKHPSEILTEGQKVR 344 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPG 726 V++ ++D + +I L++R E P Sbjct: 345 VRIEKIDPETGKIGLSLRNQQEHPW 369 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 61/137 (44%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I++++ + Q G I++G V+ + FGAFV + +GL+ Sbjct: 347 IEKIDPETGKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVEGLI 406 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNER 738 HIS L++ V VVK G V+VK+L V + +RI+L+++ Q + + Sbjct: 407 HISELAHNRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAEAAP 466 Query: 739 PQNNRPAAKPRGREAQP 755 + P A + + P Sbjct: 467 EVDEPPRAPVVPKRSGP 483 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 2/89 (2%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 +D++ G +++ + G +I G + S VE+ +V G + Sbjct: 200 WSDIREGGLVDAKIVAANTGGLECEIAGGVRGFIPASQAGLYRVENLGDLV--GQRITCV 257 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRG 733 + E + +R + L+ R + + +A++ Sbjct: 258 ITEANERRGNVVLSRRAVLEREKESAKKE 286 >UniRef50_Q89AJ3 30S ribosomal protein S1 n=296 Tax=Proteobacteria RepID=RS1_BUCBP Length = 566 Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats. Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 2/94 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 LQ G+I+ G V N+T++GAFVD+G DGL+HI+ ++ K V+ P +V GD VK+K+ Sbjct: 187 ETLQEGLIVSGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNIGDEVKIKI 245 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 L+ D ++ R++L ++ L + P + R + Sbjct: 246 LKFDREKIRVSLGLKQLSDDPWTKISERYPEKTK 279 Score = 90.8 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 2/124 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V I + ++ K + + G VTN+T++G FV+I Sbjct: 241 VKIKILKFDREKIRVSLGLKQLSDDPWTKISERYPEKTKITGRVTNLTDYGCFVEIEEGV 300 Query: 675 DGLVHISSLSNKFVE-DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARR 732 +GLVH+S + P +V+ +VKV +L++D +R+RI+L ++ P +++ Sbjct: 301 EGLVHVSEMDWTNKNIHPSKMVQVNSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKK 360 Query: 733 GGGN 736 Sbjct: 361 YNKG 364 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 2/116 (1%) Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 V +I ++++ R K + +E G + G + ++T+FG F+ + Sbjct: 325 NSVVKVMILDIDEERRRISLGLKQCKNNPWMEFSKKYNKGSHVVGKIKSITDFGIFIGLE 384 Query: 672 VHQDGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQP 725 DGLVH+S +S E+ K G+ V VL+VD R+RI+L ++ L E P Sbjct: 385 GSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVLQVDPDRERISLGIKQLQEDP 440 Score = 59.6 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 71/172 (41%), Gaps = 4/172 (2%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 I + ++ L+ S N+ + + V ++ +++ K Q Sbjct: 379 IFIGLEGSIDGLVHLSDISWNISGEESVKKYKKGEEVLAVVLQVDPDRERISLGIKQLQE 438 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV----EDPHTV 694 + ++ + G ++ G + + N V + H DGL+ ++S++ + P Sbjct: 439 DPFAKYVSSHKKGSLVSGTIKKIDNNVIVVSLSEHIDGLIKFLNISDEIMNVHDNKPWNK 498 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAA 746 K G+IV+VK+ +D + + I L++ ++ +N + + + + ++ Sbjct: 499 AKIGEIVEVKLNSIDKKERIIYLSILEKQELKISNDIKKNNSHKQEIDKDKN 550 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%) Query: 583 TQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 ++ + ++ S K + ++ V I+ E++K + K + Sbjct: 377 LEEGIDGMIHVSDMSWTRKINHPSEVLKKGDEVEAIVLEIKKEDQRVSLGIKQLESDPWE 436 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + + G ++ G V + +FGAFV++ DGL+HIS LS VE V+K GD + Sbjct: 437 SINDRFKVGDMVTGQVAKIASFGAFVNLDGDIDGLIHISQLSEDHVERVKDVIKVGDEIT 496 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE--RPQNN 742 +V++VD +RI L+++ E R E RP ++ Sbjct: 497 ARVIKVDSIERRIGLSIKAVNYDTEQLRRETASFEALRPSSD 538 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 2/106 (1%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++ G +EG V N+T+FGAFVD+ DGL+HI+ +S V P ++ G ++V + Sbjct: 181 ETVKEGDKVEGIVKNITDFGAFVDL-RGMDGLLHITDMSWGRVNHPSEMLHIGQSLEVVI 239 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 LEVD +++R++L ++ + + P R+ N + P G Sbjct: 240 LEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYG 285 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 71/153 (46%), Gaps = 2/153 (1%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 ++ ++ L+ S + + +D + ++ + + + + Sbjct: 289 ELEKGVEGLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPW 348 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDI 700 + + G +++G V N+T +GAFV + DG++H+S +S + P V+K GD Sbjct: 349 ADIESRFPIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHPSEVLKKGDE 408 Query: 701 VKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 V+ VLE+ + +R++L ++ L+ P E+ R Sbjct: 409 VEAIVLEIKKEDQRVSLGIKQLESDPWESINDR 441 Score = 88.5 bits (218), Expect = 1e-15, Method: Composition-based stats. Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 ++ +I E+++ K + ++G VT + +GAFV++ Sbjct: 234 SLEVVILEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKG 293 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 +GLVH+S LS K + P V+K ++ VL + ++ ++I+L +R L++ P Sbjct: 294 VEGLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIES 353 Query: 732 R 732 R Sbjct: 354 R 354 Score = 41.9 bits (97), Expect = 0.086, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 +L+ G I+ G + + VDIG +G + IS ++ +E GD ++V Sbjct: 13 KFRELREGSIVTGTIQEIRPQVVLVDIGYKSEGAISISEFEDEEIE-------VGDQIEV 65 Query: 704 KVLEVDLQRKRIALT 718 + ++ + L+ Sbjct: 66 LLERLENDEGIVVLS 80 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V +I +++ + K + G ILEG V N+T FG F+ I Sbjct: 343 VEVVILGIDQDKKRISLGMKQVKPNPWELVGEKYPEGTILEGVVKNITEFGMFIGIEDGI 402 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNA 730 DGL+H+S +S K V P+ + K GD V+ KVL VD + ++ L ++ L E P Sbjct: 403 DGLIHVSDISWTKKVRHPNELFKVGDTVQAKVLTVDQENEKFTLGIKQLTEDPWSNAP 460 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 64/133 (48%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV + +++ K + G I++G +TN+T+FG FV++ Sbjct: 429 TVQAKVLTVDQENEKFTLGIKQLTEDPWSNAPSVYPVGGIVKGIITNITDFGLFVEVEEG 488 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 +GLVH+S LS+K ++ P + K G+ ++ K++ V + +R+ L+++ ++ E R Sbjct: 489 IEGLVHVSELSSKKIKSPSEIYKDGEEIQAKIIHVSAEERRLGLSIKQLKEDEEHRKSRE 548 Query: 734 GGNERPQNNRPAA 746 P + + Sbjct: 549 YSRTGPDSGQSLG 561 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 2/120 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + + +K + K + G VTN+ ++G FV++ Sbjct: 256 LELKVLSFDKENQKVSLGLKQLVPDPWQDITERFPETSHHVGKVTNLVDYGVFVELESGV 315 Query: 675 DGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GLVHIS +S + P +V GD V+V +L +D +KRI+L M+ + P E + Sbjct: 316 EGLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGIDQDKKRISLGMKQVKPNPWELVGEK 375 Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + G ++ G V NVT +G FVD+G DGL+HI+ +S K + P +V G +++KV Sbjct: 202 QTISEGQVVVGKVKNVTEYGVFVDLG-GLDGLLHITDMSWKRIRHPREMVNLGQELELKV 260 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARR 732 L D + ++++L ++ L P + R Sbjct: 261 LSFDKENQKVSLGLKQLVPDPWQDITER 288 Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%) Query: 620 KELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 + +E G D F++A DL+ G I++G + + + VD+ +G + Sbjct: 5 ETMENNGTDLDFNFESALEDYLSTDFGDLEEGTIVKGEIVRIDDDNVLVDVNFKSEGQIP 64 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 N D + K GD + V V+ + Q I L+ Sbjct: 65 TIEFQNT---DGNITAKVGDKIDVFVVRKNEQEGTIILS 100 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 24/185 (12%) Query: 553 FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 F+ I G + L VH +R+ ++ K G+ E L EK Sbjct: 391 FVEIEEGIDGL----VHVSDMSWTQRVKHPSEMFQK---GDEVEAVLLNIDTADGEKPK- 442 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 I +++ DP D PG I++ V V +FGAFV+I Sbjct: 443 -----ISLGIKQLNTDPWDRIPF-----------DFPPGKIVDAKVLKVLDFGAFVEIEK 486 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 +GLVH+S +S++ V+DP V+ G +KV++L VD Q ++I L+++ + E + Sbjct: 487 GIEGLVHVSEISDEHVDDPRKVLTPGQELKVQILSVDPQERKIGLSVKSANRATEMAEAQ 546 Query: 733 GGGNE 737 G + Sbjct: 547 GYNSP 551 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 2/90 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ L+ G +EG V N+T +GAF+D+G DGL+HI+ +S V P + + GD V+V Sbjct: 196 TLERLKEGQEVEGIVKNLTEYGAFIDLG-GIDGLLHITDMSWGRVNHPSELFQVGDHVRV 254 Query: 704 KVLEVDLQRKRIALTMR-LDEQPGETNARR 732 KVL+ + +R++L ++ + E P + Sbjct: 255 KVLKFNADTERVSLGLKQISEDPWSKAQEK 284 Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 5/90 (5%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVK 704 PG +++G V N+ +FG FV+I DGLVH+S +S + V+ P + + GD V+ Sbjct: 370 EKYPPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVSDMSWTQRVKHPSEMFQKGDEVEAV 429 Query: 705 VLEVDL---QRKRIALTMR-LDEQPGETNA 730 +L +D ++ +I+L ++ L+ P + Sbjct: 430 LLNIDTADGEKPKISLGIKQLNTDPWDRIP 459 Score = 75.0 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVV 695 + PG ++ G V ++ ++GAF+++ +GLVHIS +S + V+ P +V Sbjct: 274 SEDPWSKAQEKYIPGTVVRGKVVSLKDYGAFIELEEGIEGLVHISEMSWTRRVKHPSKMV 333 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 GD+V VL+VD++ RI+L M+ L+ P E + Sbjct: 334 AVGDVVDAVVLDVDVKNNRISLGMKQLEPNPYEQLNEK 371 Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 +E G+ E A + +++ G IL+G V +V A VDIG +G + I Sbjct: 2 VEAGGQKYEAEESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAID 61 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 D +V GD++ V + + + L+ Sbjct: 62 EF---RQADGGILVTPGDVIDVLLESRENEAGMCVLS 95 >UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2R4_9DELT Length = 507 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 39/133 (29%), Positives = 61/133 (45%), Gaps = 8/133 (6%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETM----NDLQPGMILEGAVTNVTNFGAFVD 669 T T +I E+ G++ + Q + E+ + PG ++ VT FGAFV+ Sbjct: 162 TYTFLITTFERDGKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAAFGAFVE 221 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIALTMRLD-EQP 725 + +GLVH+S LS E V G V VKVL D +K RI+L+++ P Sbjct: 222 VAPGLEGLVHLSELSWSRAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDP 281 Query: 726 GETNARRGGGNER 738 +T + +R Sbjct: 282 WDTVGEKFAAGDR 294 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 81/212 (38%), Gaps = 11/212 (5%) Query: 523 WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILA- 581 RD +R++L + E+ LR NP D + + Sbjct: 171 ERDGKNIVVSRRKLQEQ--------ERAESELRFLESVNPGDVIPAVVTRFAAFGAFVEV 222 Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 A + S R KA D D V +K K A Sbjct: 223 APGLEGLVHLSELSWSRAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDPW 282 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDI 700 G +EG VT + +FGAFV+I +GL+H+S +S+ + + P VV G+ Sbjct: 283 DTVGEKFAAGDRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGET 342 Query: 701 VKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 V V V +VDL ++RI+L+++ + P + Sbjct: 343 VTVAVKDVDLSKRRISLSLKEVAGDPWAAVSD 374 Score = 80.4 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 36/147 (24%), Positives = 62/147 (42%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 TVT +K+++ R K + G +EG V N +G F+++ Sbjct: 341 ETVTVAVKDVDLSKRRISLSLKEVAGDPWAAVSDTFAIGSTVEGTVENRQQYGLFINLAP 400 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 GL+ S L + P+ V +GD V V V E+D +++++ L + E R Sbjct: 401 GVTGLLPASKLRDALEPAPYEKVSSGDTVSVVVSEIDTEKRKMTLAPVGGTKEREFTRDR 460 Query: 733 GGGNERPQNNRPAAKPRGREAQPAGNS 759 G +R ++N + +E Q A S Sbjct: 461 GEYRDRDRDNNDWKQYAKKEKQTAQAS 487 >UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGS2_PETMO Length = 532 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 7/165 (4%) Query: 571 EAYPVV--ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRD 628 E YP++ R+ ++ L+G K +P + K + K G++ Sbjct: 102 ENYPIIFKNRLKKGYSVLIEGLIGAFLPGSL----SLLSPKDDLPQGEKMAKVISKNGKN 157 Query: 629 PRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV 688 K +T N+ + GM+++G V ++ NFGAFV + H +GL+ S +S Sbjct: 158 IVVSIKDYAEEKISQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEK 217 Query: 689 EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +K G VK ++++D ++KRI+L+++ L E P +T + Sbjct: 218 ISIKDYLKVGQKVKALIIKLDREKKRISLSLKRLKENPWKTVDEK 262 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 4/137 (2%) Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 + D+ K G IIK L++ + K + G I++G Sbjct: 215 DEKISIKDYL--KVGQKVKALIIK-LDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQG 271 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 VT + FG V I +GLVH + + +V GD V+VK+L +D + K+I Sbjct: 272 TVTKILPFGFTVKIDEGLEGLVHETEIFWGRKGRISDLVNVGDDVQVKILNIDKENKKIN 331 Query: 717 LTMR-LDEQPGETNARR 732 L+ + + P E + Sbjct: 332 LSYKQVSGDPWENIEEK 348 Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 1/120 (0%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I ++K + +K G I+ G V V + GA + I G + Sbjct: 320 ILNIDKENKKINLSYKQVSGDPWENIEEKYYEGNIVTGTVEKVLDNGAIIKIDEGITGFL 379 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNE 737 H+S LS FV+D TV+ +KVK++++D KR+ L++R E P + ++ + Sbjct: 380 HVSELSWDFVDDISTVLNEKQKIKVKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGD 439 Score = 46.1 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 2/90 (2%) Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSL 683 + R + + + +++PG ++G + + GA V I G + + S Sbjct: 412 DNKRMRLSVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVEAYLPASK- 470 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 ++ + GD ++ KVLE+ L+ + Sbjct: 471 ASTNSKSLEETYSIGDQIEAKVLEIGLENE 500 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 1/155 (0%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + A D + + SEL + ++ D V I ++K K Sbjct: 214 KFGAFVDLGGVDGLIHVSELSWKRVNNPADVVSVGDKVEVYILSVDKENNKIALALKDVN 273 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 N + G ++EG V + +FGAFV+I +GLVHIS +S + + P V+ Sbjct: 274 ENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQPGVEGLVHISEISEERIAKPSDVLNL 333 Query: 698 GDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 GD V+VK+L++D + RI+L+++ E+P E + Sbjct: 334 GDKVRVKILDIDNKENRISLSIKDAVEKPKEDLDK 368 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 6/125 (4%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDL----QPGMILEGAVTNVTNFGAFV 668 T+T + E +K K + A+ E L +PG G V+ + FGAFV Sbjct: 160 KTLTVKVIEFDKDKEKVVLSRKVIEKAEAEEKKQHLLNSIKPGEKRSGVVSRLAKFGAFV 219 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGE 727 D+G DGL+H+S LS K V +P VV GD V+V +L VD + +IAL ++ ++E P E Sbjct: 220 DLG-GVDGLIHVSELSWKRVNNPADVVSVGDKVEVYILSVDKENNKIALALKDVNENPWE 278 Query: 728 TNARR 732 + + Sbjct: 279 SVGNK 283 Score = 56.1 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 54/113 (47%), Gaps = 1/113 (0%) Query: 627 RDPRPEFKTAQFADGVET-MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 + + +F + +E+ M ++ G +++G + +VT A V+IG DG++ S + Sbjct: 3 EEIKDTNSMKEFMEDIESSMKSIRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVE 62 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNER 738 ++ ++K + + V VL+++ + L+ + ++ + + E+ Sbjct: 63 NEEDNLSDILKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEK 115 Score = 45.7 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNAR 731 + S LS +VED + G + VKV+E D ++++ L+ ++ E+ + Sbjct: 135 NGIRAFIPASQLSLSYVEDLKSF--IGKTLTVKVIEFDKDKEKVVLSRKVIEKAEAEEKK 192 Query: 732 RGGGNERPQNNRPAA 746 + N + + Sbjct: 193 QHLLNSIKPGEKRSG 207 >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 35/87 (40%), Positives = 53/87 (60%), Gaps = 2/87 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 +L G ++G V N+T +GAFVD+G DGL+HI+ ++ K V+ P +V GD V VKV Sbjct: 187 ENLVEGSEVKGVVKNLTEYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEVTVKV 245 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNAR 731 L+ D R R++L ++ L + P A Sbjct: 246 LKFDKDRTRVSLGLKQLGQDPWAAIAE 272 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 2/102 (1%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE-DPHTVVKA 697 + L G VTN+T++G FV+I +GLVH+S + P VV Sbjct: 265 DPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIHPSKVVSL 324 Query: 698 GDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNER 738 GD V+V VLE+D +R+RI+L ++ P A ++ Sbjct: 325 GDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADTHNKGDK 366 Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 2/146 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV ++ E+++ R K + + + G + G + ++T+FG F+ + Sbjct: 327 TVEVMVLEIDEERRRISLGLKQCKANPWTQFADTHNKGDKVTGKIKSITDFGIFIGLEGG 386 Query: 674 QDGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 DGLVH+S +S E+ K GD V VL VD ++RI+L ++ L+E P Sbjct: 387 IDGLVHLSDISWSISGEEAVRQYKKGDEVSAVVLAVDAVKERISLGIKQLEEDPFNNFVA 446 Query: 732 RGGGNERPQNNRPAAKPRGREAQPAG 757 A +G + + AG Sbjct: 447 INKKGAVVSATVVEADAKGAKVELAG 472 Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%) Query: 649 QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 + G ++ V GA V++ +G + D + V GD+V+ K V Sbjct: 449 KKGAVVSATVVEADAKGAKVELAGGVEGYI--------RSADLTSEVAVGDVVEAKYTGV 500 Query: 709 DLQRKRIALTMRLDEQ 724 D + + + L+++ +Q Sbjct: 501 DRKSRIVHLSVKAKDQ 516 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 2/91 (2%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + VE ++ L+ G +LEG V N+T+FG F+D+G DGL+HI+ +S +E P V+ Sbjct: 244 SQKVEIVSKLEKGQVLEGTVKNITDFGVFIDLG-GVDGLLHITDISWGRIEHPKEVLSLD 302 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 + + V VL+ D ++KRIAL ++ L P E+ Sbjct: 303 EKINVVVLDFDDEKKRIALGLKQLTPHPWES 333 Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 3/122 (2%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 K G +++ L++ R K G V N+TNFG FV Sbjct: 387 KVGDEIEAEVLT-LDREDRKMSLGIKQLTQDPWQNVAERYPIGSKHTAVVKNMTNFGVFV 445 Query: 669 DIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 +I DGL+HIS LS K V P+ K GD + V VLE+D+ ++++L + L+E P Sbjct: 446 EIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLELDVDNRKLSLGHKQLEENPW 505 Query: 727 ET 728 +T Sbjct: 506 DT 507 Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 59/120 (49%), Gaps = 2/120 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ + + + K DL G ++G + V ++GAF++I Sbjct: 305 INVVVLDFDDEKKRIALGLKQLTPHPWESLNADLAIGSKVKGKIVTVADYGAFLEIIPGV 364 Query: 675 DGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GL+H+S +S + P +K GD ++ +VL +D + ++++L ++ L + P + A R Sbjct: 365 EGLIHVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLTQDPWQNVAER 424 Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 4/182 (2%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 ++ + L+ S + K + + T+ ++ EL+ R K + Sbjct: 446 EIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDTLAVVVLELDVDNRKLSLGHKQLEENPW 505 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 I +G V VT+ GA + + +G V ++ ++ +V+KA + Sbjct: 506 DTFETIFTLDSIHQGTVVKVTDKGAVIALPYGVEGFVPTKHMA----KEDGSVIKAEETN 561 Query: 702 KVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAM 761 K++E + KRI ++ + + A N + + + ++ + S + Sbjct: 562 DFKIIEFNKDAKRIVVSHARIWEEAKAEAVAEERNAKKKEAKASSSAVKKVKDSVEKSTL 621 Query: 762 MD 763 D Sbjct: 622 GD 623 Score = 46.1 bits (108), Expect = 0.006, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 60/157 (38%), Gaps = 22/157 (14%) Query: 580 LAATQQALKDLMGNSSELR----NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKT 635 +A Q A K+L ++EL+ L + + + ++ I L P +D + Sbjct: 1 MAKKQVAEKELEAKTAELQGADARLSEKETIESEADSVSIEQIKSSLATPDQDFDWDADD 60 Query: 636 AQF------------ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 F +T N + G I+ G V ++ N +++G DGLV S Sbjct: 61 KAFGNYSDADRKKFEDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEF 120 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 + +K GD V V V + ++ L+ + Sbjct: 121 RD------TPDLKVGDKVDVFVEAPEDANGQLILSRK 151 >UniRef50_A2EUK7 SH2 domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2EUK7_TRIVA Length = 1360 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 107/714 (14%), Positives = 225/714 (31%), Gaps = 146/714 (20%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG--LDDTQLRNLET 58 +M+ F GE V+ L +E +T FI YRK I + D + +++ Sbjct: 183 IMDQHFKTRGGGERDI-EALVEVLKELHNEKHTPQFIINYRKNIYRDTVIGDEDIYHIQN 241 Query: 59 RLSYLRELEERRQAILKSISEQGKLTDD---------LAKAINATLSKTELEDLYL---- 105 + + E+R I I G +D L I + L+DLY Sbjct: 242 AIREFKIFSEKRIRIQPLIEHLGLTSDPSDDDQKTAMLRHFIRNADDTS-LDDLYNFDEL 300 Query: 106 ---PYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD--KGVADTKAALD 160 P + T + E + D P + + D + D + AL Sbjct: 301 QMNPETTPKNTTFKRNAEY-FQAYIDKFIYSPMDFVHILSLNSSLNDPPEPQTDPQQALQ 359 Query: 161 GARYIL----------------------MERFAEDAALLAKVRDYLWKNAHLVSTVVSGK 198 L ++ A + +R + + + + Sbjct: 360 SWHDELSTNYPSVFPNIEVMTRQMVGFAAKQLATHPLFIDMLRTRFSPHIVINTQPTTSG 419 Query: 199 EE-----EGAKF-RDYFDHHEPLSTV-PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE 251 + K+ ++P+ + + + L + G L +++ D D+ +E Sbjct: 420 AKSSMMYPKGKYGSIKRLKNKPIISFNKTDKWLLIVEAFQSGNLTYTIDTDKGIDKEIEE 479 Query: 252 SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVF 311 I +R + DS RK ++ + + + E +++ AE N Sbjct: 480 ------ISTKYRMRYP-SDWDSLRKDILQMAIKDFIWPQIVKETEDELKKNAEKFVCNEI 532 Query: 312 ARNLHDLLMAAPA-----------GLRATMGL---DPGLRTGVKVAVVDATGKLVATDTI 357 L L + P + + + + + A+V+ G ++ + + Sbjct: 533 ETRLFSHLTSPPYTQLSTSQPYILKSQKILAMHYTSDDTKRKIYAAMVNEKGNIIDSLYL 592 Query: 358 YP----------------------------HTGQAAKAAMTVAALCEKHNVELVAIGNGT 389 + + + K+ + + E H+ ++AI Sbjct: 593 HSKIIDSKVIVNWDDPDKQIKEGSANNLAANDLEVIKSKVALVKFIETHHPPVIAI--TA 650 Query: 390 ASRETERFYLDVQKQFPKVT------AQKVIVSEAGASVYSASEL-AAQEFPDLDVSLRG 442 + ++ + + + ++ A +Y+ S E +L R Sbjct: 651 SCLKSASLVHAIVELVHSRIQPESNRPRVLLAPVEHAILYAHSRDCCKAELHELPKDKRA 710 Query: 443 -------AVSIARRLQDPLAELVK-IDPKS-----IGVGQYQ-----HDVSQTQLARKLD 484 A S ARR+Q+P+AEL + I PK + +Q ++ + + +A+ ++ Sbjct: 711 DGAEFLIAASTARRMQNPMAELCRLITPKKNHLTDWAMTPFQSVFSGNNDNTSPVAQAIE 770 Query: 485 AVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK- 538 + GVD+ A + + GL A+ I+ ++ + R +L Sbjct: 771 RACLRAIALTGVDMTAAISNPNLRSTVQFIPGLGPHTAEKIIDIAQKDN-IKQRSKLRSA 829 Query: 539 VSRLGPKAFEQCAGFLRIN-----------HGDNPLDASTVHPEAYPVVERILA 581 + + F+R +N LD + + + Y IL Sbjct: 830 LHEFDDMVVKNALPFIRFPMENKLNDDHSLEDNNYLDGTLIPMDEYNTAMDILK 883 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVET----MNDLQPGMILEGAVTNVTNFGAFV 668 T+ + +L+K K + + E + + G +EG V+ +TNFG FV Sbjct: 78 KTLKVKLIQLDKSKNKIVLSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRITNFGVFV 137 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGE 727 D+G +GLVHIS LS K ++DP VV GD +KV VL ++ R RI+L+++ P E Sbjct: 138 DLG-GVEGLVHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISLSIKRTLNSPWE 196 Query: 728 TNARRGGGNE 737 ++ N+ Sbjct: 197 NIGKKYKSND 206 Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 57/118 (48%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + + L + K + + I++G V+ V N GAF++I Sbjct: 169 LKVYVLNLNQDRNRISLSIKRTLNSPWENIGKKYKSNDIVDGIVSKVINIGAFIEIEPGI 228 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 +GLVHIS +S + + P V++ GD VKVK+L +D + RI+L+++ + N + Sbjct: 229 EGLVHISEISQEHITTPEEVLRVGDKVKVKILNIDEKASRISLSIKEAQDKFSPNFKE 286 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 56/106 (52%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + R + + E + ++QPG ++ G V + G FV+I Sbjct: 415 VEVVVLGINIVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQGVFVEIADGV 474 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +G +HIS LS + V+DP V GD + KV+ +D +R+RI+L+++ Sbjct: 475 EGFIHISQLSIRRVDDPRDAVSEGDEIVAKVIGIDEERRRISLSVK 520 Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 1/138 (0%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V I + +D K A D G EG V N+T+FG FV++ Sbjct: 328 HVKAKILRFDPEAQDLILSVKEALGDPWENVERDFPVGSKAEGTVVNITDFGVFVELAPG 387 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GLV +S K +D + VV GD V+V VL +++ ++I L+MR P E + Sbjct: 388 IEGLVPRRYVSWKRFKDINEVVNIGDQVEVVVLGINIVDRKITLSMRDTRPDPWEEVVKN 447 Query: 733 GGGNERPQNNRPAAKPRG 750 + + P+G Sbjct: 448 IQPGQLVRGKVVTIIPQG 465 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 4/125 (3%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + + V ++ R E + + + D I+ G V+ +T+ G FV Sbjct: 155 RVKILRVNRKRNQIILTQRQVLEEEQKERAEKAWLRLKD---SDIVRGHVSRITDEGIFV 211 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGE 727 D+G +G V L + +++ V + GD+V+ KVL VD ++K + L++RL P + Sbjct: 212 DLGDGIEGFVPKDELDWRPIKNIAKVFRRGDVVRAKVLSVDEEKKEMVLSIRLATPNPWQ 271 Query: 728 TNARR 732 A + Sbjct: 272 LFAEK 276 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 5/157 (3%) Query: 577 ERILAATQQALKDLM-GNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKT 635 E I ++ + + + R +K + V V + +++ ++ + Sbjct: 207 EGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRRGDV--VRAKVLSVDEEKKEMVLSIRL 264 Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV 695 A G ++ G V G + + GLV +S K + Sbjct: 265 ATPNPWQLFAEKHNVGDVVSGRVLRYLRGGLLLLVDR-VTGLVPAQEVSWKRGAKVEDLY 323 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGETNAR 731 K GD VK K+L D + + + L+++ P E R Sbjct: 324 KIGDHVKAKILRFDPEAQDLILSVKEALGDPWENVER 360 Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 5/134 (3%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP-GMILEGAVT 659 + + E +V ++ K A + + + + + G + Sbjct: 55 ELARQVQEGNVPTSVEVVVTRTNDDKGYISVSQKRAAYRKLWKDVEEWEKSGESRKVKAV 114 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + G FVD+G G V S L +FV D V G ++VK+L V+ +R +I LT Sbjct: 115 GADDKGVFVDLGAGILGYVPASQLEIRFVRDTKKYV--GRSLRVKILRVNRKRNQIILTQ 172 Query: 720 R--LDEQPGETNAR 731 R L+E+ E + Sbjct: 173 RQVLEEEQKERAEK 186 >UniRef50_A4I9F1 Putative uncharacterized protein n=2 Tax=Leishmania RepID=A4I9F1_LEIIN Length = 1457 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 98/503 (19%), Positives = 160/503 (31%), Gaps = 95/503 (18%) Query: 154 DTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHE 213 D + L L+ +F++ L + V D L+ + + + F E Sbjct: 492 DGEQILSLFTKALVSQFSKAPVLASMVFDVFCAEGDLIVSYKRSERSD-QIFSLASMFTE 550 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS 273 L + +++L D + I++ GL D Sbjct: 551 HAQY-----FLELLEMERNDLVKLYFVLDQKLVYD---------ILNLEGLYQRREDTDW 596 Query: 274 WRKGVVSWTWRIKVLMH-LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATM-- 330 WR + ++ + L+ L T++ + AE A+ L P Sbjct: 597 WRARDEAMSFVVIRLLEVLPTQVRAQLTANAEYVVSVSSAQRLSTFCSQGPYAATRLQLS 656 Query: 331 GLDPGLR------------TGVK--------VAV------------VDATGKLVATDTIY 358 D R K AV +D G ++ T Sbjct: 657 DFDGAARLWEPQWNVVEALPATKEAQDVSRVCAVYRGNSGVTAFTFIDEHGSVLGTTRWV 716 Query: 359 PHT-------GQAAKAAMTVAALCEKHNVELVAIGNG-TAS----RETERFYLDVQKQFP 406 +A A + L + +VAIG TA R E F + Q Sbjct: 717 DCAVSTVSGRERAVLQAAQLRKLFTQCRPTVVAIGASSTACLPLLRTLENFVREQVHQST 776 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIG 466 V V S YS + A E P + + +V++AR +QDPL L + Sbjct: 777 FVDVPVVWASVEVPRYYSVTTYARLELPQTENIVVTSVALARYVQDPLQVLCSLFEGEQT 836 Query: 467 VGQY--------QHDVSQTQLARKLDAVVEDCVNAVGV---DL----NTASVPLLTRVAG 511 Q HD QL ++L + V AVG+ D+ N A+ L V G Sbjct: 837 ALQLCRTIRISASHD---RQLYQRLAWEMSLWVAAVGLWVSDIVFRPNAAAT--LQFVPG 891 Query: 512 LTRMMAQNIVAWRDENGQFQNR---QQLLKVSRLGPKAFEQCAGFLRINHGDN------- 561 L A+ + + Q+R +QLL+ G + A LR+ + Sbjct: 892 LGPAKARALANAILHSDVPQSRRQVEQLLQP--YGAAIVQNAAPVLRVRSPEQCDAELPW 949 Query: 562 -PLDASTVHPEAYPVVERILAAT 583 PLDA+ + + Y + + AT Sbjct: 950 HPLDATLIPSQWYTIACMVAKAT 972 >UniRef50_A9SG12 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SG12_PHYPA Length = 421 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 1/111 (0%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 E P R R + A V+ + + G + G V +V ++GAFVDIG DGLVHIS Sbjct: 110 ETPKRFQRSKSSRAAKTLTVQK-DQIVAGAVFTGKVRSVQSYGAFVDIGAFTDGLVHISE 168 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 L+ KFV++ VV G V V+VLE++ + RIALTMR E E + R Sbjct: 169 LAPKFVKEVTDVVSIGQEVTVRVLELNEKAGRIALTMRDRENEEEEQSSRP 219 Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHT-VVKAGDIVK 702 L+ G L+G V N+ GAF++ ++ + S ++ P ++ G V Sbjct: 284 WTKLKKGEELKGTVKNIIRNGAFIEFAEQGEEAFLRGSEVTEGGENVPMENLLTVGQEVT 343 Query: 703 VKVLEVDLQRKRIALTMR 720 V+VL+V +R + LTM+ Sbjct: 344 VRVLKV--ERGKAYLTMK 359 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + + ++ + K + G VTN+ ++GAFV++ Sbjct: 257 LELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPEDTRMSGKVTNLVDYGAFVELEPGV 316 Query: 675 DGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GLVHIS +S + P +V GD V+V VL VD +KRI+L M+ + P + A + Sbjct: 317 EGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDKKRISLGMKQVRPNPWDIVAEK 376 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 35/103 (33%), Positives = 59/103 (57%), Gaps = 7/103 (6%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 L+ G + G V N+T +G FVD+G DGL+HI+ +S K ++ P +V GD +++KV Sbjct: 203 KTLEEGQTVTGRVKNITEYGVFVDLG-GLDGLMHITDMSWKRIKHPKELVHLGDELELKV 261 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAK 747 L D +++++L M+ L P E A + P++ R + K Sbjct: 262 LSFDQDKQKVSLGMKQLIADPWENIA-----GKYPEDTRMSGK 299 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 2/114 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ ++ + K + G ILEG+V N+T FG F+ I Sbjct: 344 VEVVVLSVDPDKKRISLGMKQVRPNPWDIVAEKYPEGTILEGSVKNITEFGIFIGIEDGI 403 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 DGL+H+S +S K V P + K+GDIV KVL VD + ++ L ++ L E P Sbjct: 404 DGLIHVSDISWTKKVRHPGEMFKSGDIVMAKVLTVDKENEKFTLGIKQLSEDPW 457 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 53/102 (51%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + ++K K + G +++G VTN+T+FG FV++ +GLV Sbjct: 435 VLTVDKENEKFTLGIKQLSEDPWTRVPDTYPVGAMVKGTVTNITDFGLFVEVEEGIEGLV 494 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 H+S +S K V+ P + K GD ++ KV+ V +R+ L+++ Sbjct: 495 HVSEISRKKVKTPAEIYKEGDEIEAKVIHVSADERRLGLSIK 536 Score = 43.1 bits (100), Expect = 0.047, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E DL+ G I G V + VD+ +G + +S + E VK GD + Sbjct: 29 EDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEGQIPVSEFMDALGE---LEVKVGDQID 85 Query: 703 VKVLEVDLQRKRIALT 718 V V+ + I ++ Sbjct: 86 VYVVSKNESEGTIIMS 101 >UniRef50_UPI00016BFB5D hypothetical protein Epulo_08978 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016BFB5D Length = 131 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 5/106 (4%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 ++ G ILEG VT + FGAF+ + +GLVHIS +++ ++E+ +K GD+VKV Sbjct: 1 MSEKIEVGQILEGTVTGIKPFGAFISLPNSYNGLVHISHITHGYLENIADAIKIGDVVKV 60 Query: 704 KVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPR 749 KVL VDL +I+L+++ + + R +P+ N+P +P Sbjct: 61 KVLTVDLTNNKISLSIKEALEKPKQEER-----PKPRYNKPKKEPE 101 >UniRef50_C7H4V6 General stress protein 13 (Fragment) n=3 Tax=Faecalibacterium prausnitzii RepID=C7H4V6_9FIRM Length = 108 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 3/102 (2%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 ++ G +LEG VT V FGAFV + + G+VHIS +SN++V+D +TV+ GD VKV+V+ Sbjct: 3 IEVGNVLEGRVTGVKPFGAFVALPEGKSGMVHISEVSNEYVQDINTVLHDGDAVKVQVIN 62 Query: 708 VDLQRKRIALTMR--LDEQPGETNARRGGGNERPQNNRPAAK 747 + +IAL+++ L P + + RG P+ N P Sbjct: 63 IAPD-GKIALSIKRLLSPAPRQPRSDRGPRPGGPRQNSPREG 103 >UniRef50_Q1WUT5 Polyribonucleotide nucleotidyltransferase n=17 Tax=Lactobacillales RepID=Q1WUT5_LACS1 Length = 136 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 6/127 (4%) Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 + GMI+EG +T + +GAFV + GL+HIS + +V++ +K G +V+V +++ Sbjct: 3 YRIGMIIEGRITGIQPYGAFVSLDNRTQGLIHISECHHGYVDNIRNFLKVGQMVRVMIID 62 Query: 708 VDLQRKRIALTMRLDEQPGE--TNARRGGGNERP-QNNRPAA---KPRGREAQPAGNSAM 761 +D +I+L++R E+ + RR G N R N+ KP + N A+ Sbjct: 63 IDEYTGKISLSIRCLEKAFDFSREKRRPGFNHRKYWTNKHVQEGFKPISKRMSKWINEAL 122 Query: 762 MDALAAA 768 D Sbjct: 123 EDIEKKK 129 >UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovibrionales RepID=C6BYI5_DESAD Length = 503 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 7/139 (5%) Query: 614 TVTDIIKELEKPGR--DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 +V + E K G+ K Q E + + G + G V +FGAFV+I Sbjct: 251 SVRILSMEPRKDGKGLKIGLSLKQLQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVEIA 310 Query: 672 VHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG--- 726 +GLVH+S +S K V P V G V V V ++D ++RI L+M+ P Sbjct: 311 PGIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDM 370 Query: 727 ETNARRGGGNERPQNNRPA 745 E + G E NR Sbjct: 371 EDTFKVGQEVEGTVENRAE 389 Score = 98.1 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 31/206 (15%) Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 KV G K E C G R+ +H + + V +I + + + +G++ Sbjct: 113 KVPVEG-KVAETCKGGFRV---------KMMHRKVFCPVSQIDTSFVEDAEAFVGSTHNF 162 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 + +K E+ G V LE+ R F M D+QP ++EG Sbjct: 163 QVIKF-----EENGRNIVVSRRVLLEQEQEKAREAF-----------MQDVQPDAVMEGK 206 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---- 713 VT + FGAFV++ +G+VHIS LS P VV+ GD V V++L ++ ++ Sbjct: 207 VTKLMPFGAFVELTPGVEGMVHISELSWSRSAKPEDVVQPGDEVSVRILSMEPRKDGKGL 266 Query: 714 RIALTMR-LDEQPGETNARRGGGNER 738 +I L+++ L P + + ++ Sbjct: 267 KIGLSLKQLQADPWDEIGDKFKAGDK 292 Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 6/171 (3%) Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 ++ L+ S + DE V ++K+++ R K A ++ Sbjct: 312 GIEGLVHVSEMSYTKRVHKPEDEVSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDME 371 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + + G +EG V N FG F+++ GL+ +S ++ + +K GD VK+ + Sbjct: 372 DTFKVGQEVEGTVENRAEFGIFINLAPGITGLLPMSRITRSGKQAELEALKPGDKVKISI 431 Query: 706 LEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPA 756 E++ +++ LT GE G + + K R++ P Sbjct: 432 EEINTTDRKVTLT------AGEAQKADGDNDWKEYTKSAPKKSAPRKSAPK 476 Score = 51.1 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E+ ++LQ G ++G V ++T FVD G DG+V L++ E+ VK GD V+ Sbjct: 24 ESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTD---EEGELTVKDGDTVE 80 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + V+ ++ I L+ + G R N+ P + A +G Sbjct: 81 LYVISMN--NNEIVLSKAMSGAGGLNMLREAYENKVPVEGKVAETCKG 126 >UniRef50_A9KLR6 Hydroxymethylbutenyl pyrophosphate reductase n=58 Tax=Bacteria RepID=A9KLR6_CLOPH Length = 643 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 7/164 (4%) Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 V + + + + +KF + +I E R + Sbjct: 396 KVAAVLDGGLSVIVDEARIFIPASLASDTYEKNLDKFKDQEIEFVISEFNPKRRRIIGDR 455 Query: 634 KTAQFADGVETMN----DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 K A E ++ G ++EG V NVT+FGAF+D+G DGL+HIS +S +E Sbjct: 456 KQLLVAKKQELSKALFAKIKVGDVVEGTVKNVTDFGAFIDLG-GADGLLHISEMSWGRIE 514 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 P V K GD VK + ++ + +IAL+++ EQ NA Sbjct: 515 SPKKVFKVGDTVKAFIKDIQGE--KIALSLKFPEQNPWANASEK 556 Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV IK+++ G K + G ++ G V +T FGAFV++ Sbjct: 525 TVKAFIKDIQ--GEKIALSLKFPEQNPWANASEKYAVGNVVTGRVARMTEFGAFVELEPG 582 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 D L+H+S +S + +E P +K G V KV++ + K+I+L+++ Sbjct: 583 VDALLHVSQISKEHIEKPADALKIGQEVTAKVVDFNNDEKKISLSIK 629 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/148 (24%), Positives = 69/148 (46%), Gaps = 9/148 (6%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 Y + ++ A T K + + ++L++ ++ T G T +IIKE+ E Sbjct: 234 YEISKKECANTYYIQKLIDLDLNQLKSFRSVGITA---GASTPNNIIKEV----HTRMAE 286 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 Q + E++ + G +++G V V ++IG DG++ + +N+ D Sbjct: 287 MSFEQLLE--ESLVTIHNGEVVDGTVIRVKEDEIVLNIGYKADGILTRNEYTNQPNVDLR 344 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMR 720 TV GD + VKVL+V+ ++ LT + Sbjct: 345 TVANEGDTMTVKVLKVNDGEGQVLLTYK 372 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 2/97 (2%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E + +++ GM+LEG V N+T+FG FVD+G DGLVHI+ ++ + P V D +K Sbjct: 212 EMLANIKVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWGRISHPSEAVNLDDPIK 270 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 V V+ D ++R++L M+ L P E + R Sbjct: 271 VVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTR 307 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 58/129 (44%), Gaps = 2/129 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ + + K G + G V ++T++GAFV+I Sbjct: 269 IKVVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVEIEKGI 328 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARR 732 +GLVHIS +S + ++ P+ V G V+ +L +D + +++L+M+ +E P A + Sbjct: 329 EGLVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWIVLAEK 388 Query: 733 GGGNERPQN 741 + + Sbjct: 389 YPVDSEHKG 397 Score = 95.8 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 +I ++K K + + +G V N+T+FG FV++ DGL Sbjct: 359 VILNIDKEHTKLSLSMKQTEEDPWIVLAEKYPVDSEHKGIVRNITDFGVFVELESGVDGL 418 Query: 678 VHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 VHIS LS K + P +VK + VKVL+ D++ +RIAL + ++ P Sbjct: 419 VHISDLSWTKKIRHPSEIVKKNQELDVKVLKFDVKARRIALGHKQIEPDPW 469 Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 51/137 (37%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 + + L+ S K ++ + + + + R K + Sbjct: 410 ELESGVDGLVHISDLSWTKKIRHPSEIVKKNQELDVKVLKFDVKARRIALGHKQIEPDPW 469 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + ND G +G + + G V++ DG V S L V D + K GD + Sbjct: 470 SDFENDYAVGTETKGKIAQIIEKGVIVELPSGVDGFVPASHLLQGGVRDINASFKVGDEL 529 Query: 702 KVKVLEVDLQRKRIALT 718 +KV+E D + KRI L+ Sbjct: 530 PLKVIEFDRENKRIILS 546 Score = 42.7 bits (99), Expect = 0.056, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 57/157 (36%), Gaps = 10/157 (6%) Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 + + + ++ + + D + + ++ D + +L R Sbjct: 65 KDVTIDVGLKSEGIVQLIEFQNPEELKEGDDVEVFLESIEDKMGQLILSKRKADVM---- 120 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + + L+ G I+ G + G V + + + S + K V D +V Sbjct: 121 --RIWEKIYDSLEKGTIISGKIIARVKGGMTVSL-SGVEAFLPGSQIDVKPVRDFDALV- 176 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G + +V++++ + I ++ ++ + E ARR Sbjct: 177 -GQTMDFRVVKINPLTQNIVVSHKVILE-EEYEARRK 211 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 66/113 (58%), Gaps = 1/113 (0%) Query: 635 TAQFADGVETM-NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 A + ET ++ QPG +++G V V +FGAFV++ +GLVH+S +SN+ V+ P Sbjct: 258 KAALPEPWETYAHEFQPGDVVQGVVRRVVDFGAFVELRPGLEGLVHVSQISNEHVDKPSD 317 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAA 746 V++ G V V+VL VD +RKRI+L+MR QP R G + RP R Sbjct: 318 VLQPGQEVTVRVLSVDPERKRISLSMRDSSQPRGGQGRGGRRDRRPTEPRNEG 370 Score = 62.3 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 4/90 (4%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS--SLSNKFVEDPHTVVKAGD 699 + T ++ G ++ G VT V + G V + +G HIS LS P VV G Sbjct: 8 MLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEG--HISPQELSAVPGTHPSDVVSVGS 65 Query: 700 IVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 V +VL+VD++ + L+ R EQ Sbjct: 66 TVTAQVLKVDMESGHVTLSKRRAEQASAWE 95 >UniRef50_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudonana RepID=B8BU42_THAPS Length = 398 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 6/118 (5%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL+ G +E V +T +GAF+DIG D LVH+S LS+ FV + VVKAG+ + V+++ Sbjct: 140 DLEIGASVEATVKTITAYGAFLDIGAKSDALVHVSRLSDDFVANVEDVVKAGEKITVRIV 199 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 VD ++ +IA+TMR +E E +A R + RP + +Q A A+ D Sbjct: 200 SVDTEKNQIAVTMRSEE--AEASAARPTK----RRERPQRSGADQTSQAASIKAISDK 251 Score = 85.0 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 23/205 (11%) Query: 552 GFLRINHGDNPL-DASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA---SDFTD 607 FL I + L S + + VE ++ A ++ ++ +E + S+ + Sbjct: 159 AFLDIGAKSDALVHVSRLSDDFVANVEDVVKAGEKITVRIVSVDTEKNQIAVTMRSEEAE 218 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 PT K E+P R + A + + ++G V + FGAF Sbjct: 219 ASAARPT-----KRRERPQRSGADQTSQAASIKAI-SDKGFDDSKFIDGEVVSTLAFGAF 272 Query: 668 VD---------IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 V + DGLVHIS+L+ + V GD V V+V V+ + RI+L+ Sbjct: 273 VRFDSAQLGEGLEGEVDGLVHISALAEGRTANVSDVAAVGDKVSVRVRSVEPEAGRISLS 332 Query: 719 MRLDEQ----PGETNARRGGGNERP 739 M EQ P RR GG R Sbjct: 333 MITKEQEEAAPPARTERRSGGGGRE 357 >UniRef50_A0RK95 General stress protein 13 n=90 Tax=Bacillales RepID=A0RK95_BACAH Length = 119 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 28/79 (35%), Positives = 50/79 (63%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 G+++ G VT + ++GAFV + GLVHIS ++N +V+D H +K GD V Sbjct: 4 FHMSEQYTTGVVVTGKVTGIQDYGAFVALDAETQGLVHISEITNGYVKDIHDFLKVGDTV 63 Query: 702 KVKVLEVDLQRKRIALTMR 720 +VKVL +D + ++++L+++ Sbjct: 64 EVKVLSIDEEHRKMSLSLK 82 >UniRef50_A7GUA8 RNA binding S1 domain protein n=7 Tax=Bacillales RepID=A7GUA8_BACCN Length = 133 Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats. Identities = 31/79 (39%), Positives = 51/79 (64%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 G+I++G VT + ++GAFV + GLVHIS ++N +V+D H +K GD V Sbjct: 18 FHMSEQYTTGVIVKGKVTGIQDYGAFVALDDETQGLVHISEITNGYVKDVHDYLKIGDTV 77 Query: 702 KVKVLEVDLQRKRIALTMR 720 +VKVL VD + K+++L+++ Sbjct: 78 EVKVLSVDEEHKKMSLSLK 96 >UniRef50_B7GEU7 Predicted RNA binding protein (Contains ribosomal protein S1 domain) n=1 Tax=Anoxybacillus flavithermus WK1 RepID=B7GEU7_ANOFW Length = 167 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 50/87 (57%) Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 F D + G I+ G VT + +G FV + GL+HIS +++ +V++ + V Sbjct: 46 FKKRGVFHLDWKEGAIVTGVVTGIQPYGIFVSLDEQTQGLIHISEITDGYVKNIYDYVDV 105 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQ 724 G+ V+VK++ +D + KRI+L++R + Sbjct: 106 GESVRVKIIAIDEKTKRISLSLRDVDH 132 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 1/125 (0%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + + +K + K + + G ++EG + + NFGAFV++ Sbjct: 247 VEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEVENGI 306 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRG 733 +GLVHIS ++++ + P + GD VKVKVLEV+ KR++L+++ E+P E ++ Sbjct: 307 EGLVHISEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPKEDFSKYD 366 Query: 734 GGNER 738 E Sbjct: 367 DSKEE 371 Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 6/119 (5%) Query: 621 ELEKPGRDPRPEFKTAQFADGVETM----NDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 EL+K R + + + + N L+ G +EG V + FGAFVDIG DG Sbjct: 164 ELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIG-GMDG 222 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGG 734 LVH S LS V P VV GD V+V VL+ D K+IAL+++ + + P T + Sbjct: 223 LVHNSQLSWGRVNHPSEVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYA 281 Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 42/90 (46%) Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 + +M + G +L+G V +V++ A ++IG DG++ + + + Sbjct: 7 MKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNEEVNLKD 66 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 ++ D++ V VLEV+ + L+ + E Sbjct: 67 IISKDDVISVCVLEVNDGEGNVLLSKKKAE 96 >UniRef50_Q0B0Q8 RNA binding S1 n=2 Tax=Firmicutes RepID=Q0B0Q8_SYNWW Length = 152 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 70/130 (53%), Gaps = 6/130 (4%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++ PG I+EG V +T FGAF+++ GLVHIS +++ +V+D +K G+ VKVK Sbjct: 5 QTNIVPGSIMEGKVQGITKFGAFIELPGGVVGLVHISEIADTYVKDVKDFIKEGESVKVK 64 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNAR---RGGGNERPQNNRPAAKPRGREAQPAGNSAM 761 VL V K+I L+++ P ++ + R + R NR + G++ A ++ Sbjct: 65 VLNV--AGKKIGLSIKQVSPPPKSEPKAFERNYRSSRVAGNRYSNSSVGKD-NTATPISL 121 Query: 762 MDALAAAMGK 771 D +A + + Sbjct: 122 DDKIAKFLKE 131 >UniRef50_B3T9S8 Putative S1 RNA binding domain protein n=1 Tax=uncultured marine microorganism HF4000_APKG7H23 RepID=B3T9S8_9ZZZZ Length = 379 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 30/107 (28%), Positives = 56/107 (52%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I +++ R + + G ++ G VT + +FGAF + +GL+ Sbjct: 263 ILRVDREHRRIALSLRQLSPTPWTQAAQQFALGQLVSGTVTKLADFGAFTRVEETVEGLI 322 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 H+S LS++ + P VV+ GD + ++++ +DL+R RI L++R E P Sbjct: 323 HVSELSDRHIRHPREVVQVGDSLTLRIVSLDLERHRIGLSLRQVEDP 369 Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 69/136 (50%), Gaps = 5/136 (3%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGR---DPRPEFKTAQFADGVETMNDLQPGMILEGA 657 ++ ++ G +++ + GR R + + + +LQ G + +G Sbjct: 157 DTAEALAQRVGEEVSLKVLEVNRRRGRAVLSERAMLREQREEQREQLFGELQEGEVRKGV 216 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VT +++FGAFVDIG DGL+HIS LS V VV+ V+V +L VD + +RIAL Sbjct: 217 VTGISSFGAFVDIG-GADGLIHISELSWSPVSSVEEVVQVSQEVEVYILRVDREHRRIAL 275 Query: 718 TMR-LDEQPGETNARR 732 ++R L P A++ Sbjct: 276 SLRQLSPTPWTQAAQQ 291 Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 6/146 (4%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 IL + L+ ++ + E+R L + G + ++ G+ K Sbjct: 46 ILVSIGHKLEGII-PAREMRLLSRFGQDQSQVGATVLVYVLDPAGVEGQAILSLDKAQGE 104 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL--SNKFVEDPHTVV- 695 + G + G + GA VD+ V +S + S + D + Sbjct: 105 EVWHRLQQCAEAGQGVTGTIVGFNRGGAVVDVE-GLQAFVPLSQMVLSIQAGGDTAEALA 163 Query: 696 -KAGDIVKVKVLEVDLQRKRIALTMR 720 + G+ V +KVLEV+ +R R L+ R Sbjct: 164 QRVGEEVSLKVLEVNRRRGRAVLSER 189 >UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotogaceae RepID=B1LBI3_THESQ Length = 543 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 1/113 (0%) Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 ++K R +K A+ + ++ G VT + GAFV++ +G V + Sbjct: 329 NVDKENRKLTLSYKKAKGDPWENIEDRYNVNNVVTGKVTGIIKQGAFVELEEGVEGFVPV 388 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 S +S K +++P ++K G+ VKVK+L++D + ++I L+++ E P E + Sbjct: 389 SEISWKRIDEPGEILKIGEKVKVKILKIDKENRKITLSIKRTQENPWERALKE 441 Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 +T I EL+K ++ K + G ++ G V ++ FG FV + Sbjct: 235 NITAKIIELDKEKKNVILSLKRLMPDPWEKVEEKYPVGKVVNGEVISIHPFGFFVRLEPG 294 Query: 674 QDGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNAR 731 +GLV S + + VV AGD+VKV+V+ VD + +++ L+ + P E Sbjct: 295 VEGLVPRSEVFWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIED 354 Query: 732 RGGGNE 737 R N Sbjct: 355 RYNVNN 360 Score = 85.0 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 3/124 (2%) Query: 612 VPTVTDIIKELEKPGRDPR--PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 + II E+ + R PR + Q E ++ + G I+EG V ++N G V+ Sbjct: 145 EKEIEVIILEMVQTKRGPRIVVSRRALQDKKIEEFFSEKKVGDIVEGTVKGISNAGVEVE 204 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 I G + S LS P +VK G + K++E+D ++K + L+++ L P E Sbjct: 205 ISEGVRGFIPRSELSYDTRISPEDIVKPGQNITAKIIELDKEKKNVILSLKRLMPDPWEK 264 Query: 729 NARR 732 + Sbjct: 265 VEEK 268 Score = 46.9 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + + G I++G V + G VD G +G V ++ L ++ K G+ + ++ Sbjct: 16 PEEFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNEL----IKSLDE-YKVGENLTLQ 70 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +L ++ + + I R + R+ ++P R ++ +G Sbjct: 71 ILNLNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKG 116 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 69/145 (47%) Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKT 635 + A D + + SE+ + + D T+ + ++K KT Sbjct: 218 ITDFGAFVNIGEVDGLLHISEISHARVEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKT 277 Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVV 695 ++ G LEG V N T FGAFV++ +GLVHIS +S++ V + V+ Sbjct: 278 LLPTQWEVARATIKAGDALEGVVRNTTAFGAFVEVLPDVEGLVHISQISHERVTNVEDVL 337 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMR 720 K GD V VKVLE D + +R++L+++ Sbjct: 338 KKGDKVNVKVLEFDFENERLSLSIK 362 Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 6/134 (4%) Query: 609 KFGVPTVTDIIKELEKPGR----DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 KF T I+E++K + R + + E ++ G ++EG V+ +T+F Sbjct: 162 KFVGNEYTFKIEEVDKSKNKIILNRRVILEEEKAKKLAEVYGNINEGDVIEGKVSRITDF 221 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDE 723 GAFV+IG DGL+HIS +S+ VE V+ GD +KV V+ VD + ++++L+ + L Sbjct: 222 GAFVNIGE-VDGLLHISEISHARVEKVADVLSVGDTIKVAVIAVDKENEKVSLSAKTLLP 280 Query: 724 QPGETNARRGGGNE 737 E + Sbjct: 281 TQWEVARATIKAGD 294 Score = 51.5 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 9/100 (9%) Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPH 692 T F + + + L+ G + G V+ + N +VD+ G D ++ + ++ K E+ Sbjct: 1 MTTSFEELLNSSEMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFENIE 60 Query: 693 TVVKAGDIVKVKVLEVDLQRKR--------IALTMRLDEQ 724 V+ GD V+ +V + R++ I L+ ++ E Sbjct: 61 DVLSVGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILEN 100 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 2/117 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 TV + ++ R K Q Q G + G V N+T+FGAF++I Sbjct: 18 TVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHGRVRNLTDFGAFIEIEDG 77 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 DGLVH+S +S + ++ P V+K G + + +D + +R++L+++ L+ + Sbjct: 78 VDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLSLSIKDLEPNAWDR 134 Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 15/157 (9%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + +I ++ R K + + + +PG ++ G + NFGAFV++ + Sbjct: 106 IDAVITSIDAENRRLSLSIKDLEPNAWDRFLTEHKPGDVVRGKIARFANFGAFVELDDNL 165 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GL HIS LS++ VE P VV+ G ++ K+L +D++ K+I L+ AR G Sbjct: 166 EGLCHISELSDERVEKPEDVVQLGQEMEFKILRIDVESKKIGLS-----------ARSVG 214 Query: 735 GNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGK 771 ++ P + + +G +++ + +G+ Sbjct: 215 KDDEPIVDTKVYSSQA----GSGMASLGELADFGLGR 247 Score = 56.9 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%) Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 K V+ P +V GD V+V+VL VD + +RI+L M+ + + P +T R R Sbjct: 4 KRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTR 57 >UniRef50_A4ISC1 Polyribonucleotide nucleotidyltransferase, general stress protein 13 n=5 Tax=Geobacillus RepID=A4ISC1_GEOTN Length = 124 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 ++ G I++G VT + +GAFV + GL+HIS +S++FV++ V GD V VKVL Sbjct: 6 TMKRGAIVKGKVTGIQPYGAFVQLEGGMQGLIHISEISHRFVKNVRDYVHVGDEVTVKVL 65 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGG 735 +VD + R +L+++ E PG +R Sbjct: 66 DVDYKAGRASLSLKALE-PGREKQKRQTR 93 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats. Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 2/96 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ L G I++G V N+T +GAFVD+G DGL+H++ +S V P V+K G V V Sbjct: 200 TLEKLSEGQIMQGVVKNLTEYGAFVDLG-GVDGLLHVTDISWGRVGKPADVLKPGQEVNV 258 Query: 704 KVLEVDLQRKRIALTMRLD-EQPGETNARRGGGNER 738 K+L+ D ++ ++++ ++ P + A R R Sbjct: 259 KILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTR 294 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 2/115 (1%) Query: 626 GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 R K G LEG + N+T+FG F+ I DGLVH+S +S Sbjct: 354 NRKISLGLKQVNDNPWQSIAERYPVGTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDISW 413 Query: 686 -KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNER 738 K V+ P V GD+V+ VL+VD Q +R++L ++ L P ++ R Sbjct: 414 TKRVKHPGDVYSKGDLVQAVVLKVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTR 468 Score = 85.0 bits (209), Expect = 1e-14, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 48/106 (45%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ +++ K PG L G V + T+FG FV+I Sbjct: 430 VQAVVLKVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTRLVGKVASTTDFGVFVEIEEGI 489 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GL+H+S LS + V GD ++ VL D + +RI+L+++ Sbjct: 490 EGLIHVSELSREKVPSAKDFAIVGDSIEAVVLNADSRERRISLSVK 535 Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 59/116 (50%), Gaps = 2/116 (1%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 I + ++ K + N G + G V ++ ++GAF+++ +GLV Sbjct: 260 ILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTRVSGKVVSLMDYGAFIELESGIEGLV 319 Query: 679 HISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 H+S +S K V ++ GD V V VL VDLQ ++I+L ++ +++ P ++ A R Sbjct: 320 HVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDLQNRKISLGLKQVNDNPWQSIAER 375 Score = 46.5 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/109 (25%), Positives = 42/109 (38%), Gaps = 9/109 (8%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 + + F+ ++ + ILEG V V VD+G +G V IS + Sbjct: 17 EHQSNEFAELFSASLKEQERPERDKILEGTVVRVDPDTVLVDVGRKSEGFVPISEFRD-- 74 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ--PGETNARRGG 734 + + V GD VKV V D K + + +Q ET GG Sbjct: 75 -AEGNVSVSVGDKVKV-VSSRDGGNK---FSKKRADQMAAWETIHEAGG 118 >UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV0_KOSOT Length = 572 Score = 101 bits (253), Expect = 7e-20, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 1/111 (0%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 +K G + + L+ G +EG + ++ +FGAFV + GL+ S Sbjct: 167 KKRGTNIVVSLTAFKEEKVKAYFEALETGSTVEGTIESIKDFGAFVRLTNEVVGLIPASE 226 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +S + H V+ GD V VKV++VD ++K+I+L+++ L E P T + Sbjct: 227 VSWDPSQKVHDVLNVGDKVTVKVIDVDPEKKKISLSLKQLQEDPWNTVEEK 277 Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V IK+++K R ++ A + G I++G V V GA V++ + Sbjct: 331 RVKVKIKDIDKEKRTLSLSYREALGDPWDNIEEKYKVGEIVDGKVVKVLPTGAIVELEEY 390 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGET 728 G V +S +S FV+ VVK VK K+L +D + +R+ L+++ E P + Sbjct: 391 VSGFVPVSEMSWNFVDRVEDVVKESSEVKTKILSIDKENRRMRLSLKQATEDPWQK 446 Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 2/125 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 VT + +++ + K Q G ++EG V ++ FG FV I Sbjct: 245 VTVKVIDVDPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFFVMIEPGV 304 Query: 675 DGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGETNARR 732 +GLVHIS + V D +++ GD VKVK+ ++D +++ ++L+ R P + + Sbjct: 305 EGLVHISEVFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDPWDNIEEK 364 Query: 733 GGGNE 737 E Sbjct: 365 YKVGE 369 Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 5/130 (3%) Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-G 671 V I ++K R R K A + +L+ G +EG +T + GA V + G Sbjct: 416 SEVKTKILSIDKENRRMRLSLKQATEDPWQKVHTELKVGDYVEGKITRLIKSGAVVMVDG 475 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV--DLQR--KRIALTMRLDEQPGE 727 + + S ++ K VE+ +K G+ + K++ + D ++ + + ++++ E Sbjct: 476 YGVEAFLPASQVAMKRVENLEDAIKIGEHRRFKIIRLVYDPEKDVRNMVVSIKQLLLDKE 535 Query: 728 TNARRGGGNE 737 + E Sbjct: 536 KEETQKALEE 545 Score = 45.7 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D + G V ++ G V + DG S L P GD ++V+++ Sbjct: 26 DERRGRSKTAEVHSIQPDGLLVILEGKLDGFAPESELV-----KPLKEYNIGDKIEVQIM 80 Query: 707 EVDLQRKR 714 +VD R Sbjct: 81 KVDEDEGR 88 >UniRef50_Q5BXL3 SJCHGC08355 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BXL3_SCHJA Length = 182 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 25/180 (13%) Query: 345 VDATGKLVA----TDTIYPHTGQAAKAAMT------VAALCEKHNVELVAIGNGTASRET 394 +D G++V + + + ++ KH ++ IG R+ Sbjct: 5 LDCNGEVVDFLHFHGLLVSRRAREDMKKLKEEDMQRLSTFMVKHKPQVCVIG--CDCRKA 62 Query: 395 -------ERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP-DLDVSLRGAVSI 446 + D+ + ++ + V++ S A+ + P + LR A+S+ Sbjct: 63 LFLQEDIQHLINDLANERRLPRIHVELMETELSIVFALSSRASFDLPISYPLLLRQAISL 122 Query: 447 ARRLQDPLAE---LVKIDPKSIGV--GQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA 501 RRLQDPL E LV I+ + +G+ Q + + L R L+ VN VGVD+N Sbjct: 123 GRRLQDPLFEFSQLVTIENEILGIRWHPLQDSIPRDMLLRALEIEFITRVNEVGVDVNRC 182 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 2/98 (2%) Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + ++ GM+LEG V N+T+FG FVD+G DGLVHI+ ++ + P VV +KV V Sbjct: 223 DSIKVGMVLEGTVKNITDFGIFVDLG-GLDGLVHITDITWGRINHPSEVVDLDQPIKVVV 281 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 + D KR++L M+ L+ P E + + Q Sbjct: 282 VGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGR 319 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 2/130 (1%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + ++ ++ + K + G +G V ++T++GAFV+I Sbjct: 277 IKVVVVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKGI 336 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARR 732 +GLVHIS +S + ++ P V G V+ +L +D +++L+M+ ++E P + + Sbjct: 337 EGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSEK 396 Query: 733 GGGNERPQNN 742 N R + Sbjct: 397 YVENTRHKGT 406 Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 2/111 (1%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 +I ++K K + +G V+N+T+FG FV++ DGL Sbjct: 367 VILNIDKDHTKLSLSMKRVNEDPWIALSEKYVENTRHKGTVSNITDFGVFVELEPGVDGL 426 Query: 678 VHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 VHIS LS K + P +VK ++VKVL+ D+ +RIAL + ++ P Sbjct: 427 VHISDLSWTKKIRHPSELVKKNQELEVKVLKFDVHARRIALGHKQMNPDPW 477 Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 6/127 (4%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 G ++ + G V + DG V + L V+D H+ K G Sbjct: 475 DPWGGFEQQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLLQGGVKDIHSSFKIG 534 Query: 699 DIVKVKVLEVDLQRKRIALTM------RLDEQPGETNARRGGGNERPQNNRPAAKPRGRE 752 D + ++V+E D + KRI L+ + E+ + ++ +P+ + Sbjct: 535 DALPLRVIEFDKENKRIILSALEYFKDKSKEEIESYLQAHPNEKKEIEDATAELEPQPKS 594 Query: 753 AQPAGNS 759 ++ G+ Sbjct: 595 SEKKGDK 601 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 101 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 7/149 (4%) Query: 587 LKDLMGNSSELRNLKASDFTDEKFGVPTVT--DIIKELEKPGRDPRPEFKTAQFADGVET 644 + + G + + ++ + + L R E + A A +ET Sbjct: 162 VVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIET 221 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 L+ G G VT++ +FG FVDIG DGLVH+S +S V+ P V++ GD V V Sbjct: 222 ---LREGETRRGRVTSIADFGVFVDIG-GADGLVHLSEISWTRVKHPSEVLRVGDEVDVM 277 Query: 705 VLEVDLQRKRIALTM-RLDEQPGETNARR 732 VL V+ ++++IAL++ R +P A + Sbjct: 278 VLSVNPEQRKIALSIRRTQPEPWMQVASQ 306 Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats. Identities = 31/106 (29%), Positives = 57/106 (53%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ + R + Q ++ + Q G ++ G +T + +FGAF + Sbjct: 274 VDVMVLSVNPEQRKIALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGV 333 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +GL+H+S L+ VE P+ V++ GD V V+V+ +D R+RI L++R Sbjct: 334 EGLIHVSELAGWRVEHPNEVLQEGDDVIVRVIRIDPARRRIGLSLR 379 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 66/172 (38%), Gaps = 11/172 (6%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 R+ + ++ +H + E+IL + ++ S E + L + + G Sbjct: 40 RLFRYGDVVEGEVMHVDR----EKILVDIGGKCEGVV-PSREFQTLSPEELGRLRPGDRV 94 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + +++ ++ G+ + Q + G ++E V N G V++ Sbjct: 95 LVFVLQPEDQAGQAILSIDRARQEKTWRRLQEVFEAGGVIEAEVVNYNKGGLLVNLD-GI 153 Query: 675 DGLVHISSLS-----NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 G V S + ++ + G +K+K++E++ R R+ L+ R Sbjct: 154 RGFVPASQVVAIRGGDEVSKQADMARMVGQRLKLKIIEINRHRNRLILSERQ 205 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=... 917 0.0 UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE 787 0.0 UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actino... 772 0.0 UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular ... 768 0.0 UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Ta... 764 0.0 UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria ... 747 0.0 UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa ... 747 0.0 UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria R... 734 0.0 UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Ba... 733 0.0 UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria ... 733 0.0 UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria ... 732 0.0 UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria ... 732 0.0 UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacter... 728 0.0 UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopi... 726 0.0 UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular ... 726 0.0 UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 2... 725 0.0 UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria ... 715 0.0 UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria R... 714 0.0 UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychro... 714 0.0 UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomona... 713 0.0 UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21V... 711 0.0 UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Ta... 708 0.0 UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2... 705 0.0 UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Ba... 703 0.0 UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria R... 694 0.0 UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular ... 691 0.0 UniRef50_A9NHV1 Tex protein-related transcription accessory prot... 690 0.0 UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaero... 687 0.0 UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacte... 683 0.0 UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 681 0.0 UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellac... 672 0.0 UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular o... 671 0.0 UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacil... 669 0.0 UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia ... 669 0.0 UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitr... 667 0.0 UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacter... 662 0.0 UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobact... 662 0.0 UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococc... 658 0.0 UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridia... 652 0.0 UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria... 652 0.0 UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding... 646 0.0 UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=de... 630 e-179 UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycopla... 630 e-179 UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 ... 626 e-178 UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Myco... 625 e-177 UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 622 e-176 UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonpro... 622 e-176 UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding doma... 620 e-176 UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycopla... 618 e-175 UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia... 614 e-174 UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding doma... 603 e-170 UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=... 596 e-168 UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding doma... 581 e-164 UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosiph... 578 e-163 UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 ... 572 e-161 UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosiph... 569 e-160 UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 ... 559 e-157 UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59... 553 e-156 UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4R... 553 e-156 UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding doma... 553 e-155 UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichop... 528 e-148 UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS 501 e-140 UniRef50_Q4DZK1 Transcription modulator/accessory protein, putat... 501 e-140 UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing ... 489 e-136 UniRef50_Q4QH24 Transcription modulator/accessory protein, putat... 483 e-134 UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bi... 475 e-132 UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory prote... 474 e-132 UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eu... 473 e-131 UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 ... 462 e-128 UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun se... 456 e-126 UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchi... 441 e-122 UniRef50_D1IGV1 Whole genome shotgun sequence of line PN40024, s... 438 e-121 UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorh... 427 e-117 UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=... 426 e-117 UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7... 426 e-117 UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larv... 422 e-116 UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Sch... 422 e-116 UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root Re... 412 e-113 UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putati... 410 e-112 UniRef50_C5KAX6 Tex protein-relatedtranscription accessory prote... 407 e-111 UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O808... 406 e-111 UniRef50_Q4RRW0 Chromosome 7 SCAF15001, whole genome shotgun seq... 404 e-111 UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5... 404 e-110 UniRef50_C5Z0A7 Putative uncharacterized protein Sb09g024270 n=1... 403 e-110 UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Ne... 402 e-110 UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS 402 e-110 UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria R... 401 e-110 UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia mal... 400 e-110 UniRef50_UPI000186D180 transcription elongation factor SPT6, put... 400 e-109 UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eu... 395 e-108 UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=So... 395 e-108 UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditi... 392 e-107 UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornu... 391 e-107 UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula ... 387 e-106 UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leo... 387 e-105 UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Sch... 385 e-105 UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Aga... 380 e-103 UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain pro... 379 e-103 UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyr... 363 1e-98 UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichop... 362 3e-98 UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=... 358 6e-97 UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepI... 355 4e-96 UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 T... 354 9e-96 UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma m... 351 6e-95 UniRef50_UPI00017F7950 YALI0B01224p n=1 Tax=Yarrowia lipolytica ... 338 4e-91 UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Fil... 335 3e-90 UniRef50_A4S671 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 332 3e-89 UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Sa... 331 7e-89 UniRef50_Q6BVE1 Transcription elongation factor SPT6 n=7 Tax=Sac... 328 6e-88 UniRef50_C4R7H2 Transcription elongation factor n=1 Tax=Pichia p... 325 5e-87 UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ust... 317 1e-84 UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Can... 308 4e-82 UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assemb... 308 6e-82 UniRef50_A8PWC4 Putative uncharacterized protein n=1 Tax=Malasse... 306 1e-81 UniRef50_Q55A48 SH2 domain-containing protein n=1 Tax=Dictyostel... 305 4e-81 UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 T... 302 4e-80 UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis... 288 8e-76 UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornu... 286 2e-75 UniRef50_C1E5G2 Transcription elongation-nucleosome displacement... 282 3e-74 UniRef50_UPI00019240C9 PREDICTED: similar to Suppressor of Ty 6 ... 278 7e-73 UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=... 269 3e-70 UniRef50_UPI00019085B8 probable transcriptional accessory protei... 266 2e-69 UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCM... 264 1e-68 UniRef50_Q22BP0 Zinc knuckle family protein n=1 Tax=Tetrahymena ... 260 2e-67 UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersini... 256 2e-66 UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureu... 244 1e-62 UniRef50_B0EV07 Transcription elongation factor spt6, putative n... 244 1e-62 UniRef50_A9V9Y8 Predicted protein n=2 Tax=Fungi/Metazoa group Re... 242 4e-62 UniRef50_Q7JQ89 CnjB protein n=3 Tax=Tetrahymena thermophila Rep... 228 7e-58 UniRef50_A2EUK7 SH2 domain containing protein n=1 Tax=Trichomona... 222 5e-56 UniRef50_A0DQ53 Chromosome undetermined scaffold_6, whole genome... 219 3e-55 UniRef50_A8J804 Glycine rich protein n=1 Tax=Chlamydomonas reinh... 215 6e-54 UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Ta... 207 9e-52 UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopi... 204 9e-51 UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria R... 201 6e-50 UniRef50_Q4CTN7 Putative uncharacterized protein (Fragment) n=3 ... 191 1e-46 UniRef50_A4I9F1 Putative uncharacterized protein n=2 Tax=Leishma... 183 2e-44 UniRef50_Q8SRG7 CHROMATIN STRUCTURE MODULATOR n=1 Tax=Encephalit... 177 1e-42 UniRef50_A7AMH1 Putative uncharacterized protein n=1 Tax=Babesia... 171 9e-41 UniRef50_Q586C8 Putative uncharacterized protein n=2 Tax=Trypano... 163 2e-38 UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial ... 160 2e-37 UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnop... 157 1e-36 UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergista... 157 2e-36 UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonat... 154 1e-35 UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium... 150 2e-34 UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=... 149 3e-34 UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter ... 149 5e-34 UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=... 148 6e-34 UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococ... 147 1e-33 UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovib... 147 2e-33 UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces ma... 147 2e-33 UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerof... 145 7e-33 UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1... 145 7e-33 UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FA... 144 2e-32 UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 142 6e-32 UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio ... 142 7e-32 UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID... 142 7e-32 UniRef50_Q5BZL5 SJCHGC08220 protein (Fragment) n=1 Tax=Schistoso... 140 1e-31 UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus ... 140 2e-31 UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_D... 140 2e-31 UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteri... 140 2e-31 UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 140 3e-31 UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicycloba... 139 5e-31 UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8... 138 7e-31 UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4... 138 8e-31 UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3... 138 1e-30 UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH 137 1e-30 UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=... 137 2e-30 UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succino... 136 2e-30 UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes Rep... 136 3e-30 UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1... 136 3e-30 UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacill... 136 4e-30 UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales... 135 5e-30 UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 135 6e-30 UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodother... 134 1e-29 UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensi... 134 1e-29 UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula ... 134 1e-29 UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 134 1e-29 UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3... 134 1e-29 UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae... 134 1e-29 UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria Rep... 134 2e-29 UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovib... 133 2e-29 UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteri... 133 3e-29 UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2... 132 5e-29 UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. ... 132 5e-29 UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovib... 132 6e-29 UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 132 6e-29 UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales Re... 131 1e-28 UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria ... 131 1e-28 UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga... 130 1e-28 UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Con... 130 2e-28 UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas au... 130 2e-28 UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga ... 130 2e-28 UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/rib... 130 3e-28 UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridiu... 129 4e-28 UniRef50_Q4YSG2 Putative uncharacterized protein (Fragment) n=1 ... 129 5e-28 UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteri... 129 5e-28 UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 129 6e-28 UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphil... 129 6e-28 UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcace... 128 1e-27 UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7... 127 2e-27 UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thal... 127 2e-27 UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemoly... 127 2e-27 UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteri... 127 2e-27 UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteri... 126 3e-27 UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Ver... 126 3e-27 UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium klu... 126 3e-27 UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochroma... 125 4e-27 UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovi... 125 4e-27 UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1... 125 5e-27 UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria... 125 5e-27 UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga ... 125 5e-27 UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucom... 125 6e-27 UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepI... 125 6e-27 UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2... 125 7e-27 UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae... 125 9e-27 UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus... 124 1e-26 UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacill... 124 1e-26 UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1... 124 1e-26 UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae Re... 124 2e-26 UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Seleno... 124 2e-26 UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reducta... 123 2e-26 UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata ... 123 2e-26 UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID... 122 4e-26 UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglo... 122 5e-26 UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter p... 122 6e-26 UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira Rep... 122 6e-26 UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsu... 122 7e-26 UniRef50_B9QA08 Suppressor of ty, putative n=3 Tax=Toxoplasma go... 121 8e-26 UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteob... 121 9e-26 UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflex... 121 1e-25 UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobac... 121 1e-25 UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protei... 121 1e-25 UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=... 120 1e-25 UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus... 120 2e-25 UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 ... 120 2e-25 UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotoga... 120 2e-25 UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflex... 120 2e-25 UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblay... 120 2e-25 UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1... 120 3e-25 UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID... 119 3e-25 UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroid... 119 4e-25 UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceu... 119 5e-25 UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=can... 119 5e-25 UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio R... 119 6e-25 UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium... 119 6e-25 UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromona... 118 7e-25 UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID... 118 7e-25 UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopis... 118 9e-25 UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Ta... 118 1e-24 Sequences not found previously or not previously below threshold: >UniRef50_P46837 Protein yhgF n=748 Tax=cellular organisms RepID=YHGF_ECOLI Length = 773 Score = 917 bits (2370), Expect = 0.0, Method: Composition-based stats. Identities = 773/773 (100%), Positives = 773/773 (100%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL Sbjct: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE Sbjct: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV Sbjct: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN Sbjct: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR Sbjct: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH Sbjct: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 Query: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA Sbjct: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA Sbjct: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS Sbjct: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL Sbjct: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN Sbjct: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR Sbjct: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR Sbjct: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 >UniRef50_Q45388 Protein tex n=35 Tax=Proteobacteria RepID=TEX_BORPE Length = 791 Score = 787 bits (2033), Expect = 0.0, Method: Composition-based stats. Identities = 463/771 (60%), Positives = 554/771 (71%), Gaps = 8/771 (1%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 +A EI AR QV +AV LLD+G TVPFIARYRKE TGGLDD LR LE RL YLR Sbjct: 18 RIIAQLATEIGARASQVASAVELLDDGATVPFIARYRKEATGGLDDGALRTLEVRLGYLR 77 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ELEERR AIL+SI++QGKLT +L + I +K LEDLY PYKPKRRTR QIA EAGLE Sbjct: 78 ELEERRGAILESITQQGKLTPELQQEIATAETKQRLEDLYAPYKPKRRTRAQIAREAGLE 137 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 PLAD + +DP+ P AAQY+ + + D KAALDGAR IL ER AE+A LLA +R++L Sbjct: 138 PLADAILADPACDPAALAAQYLNPEASINDAKAALDGARDILAERHAENADLLADIREHL 197 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL----N 240 W L S +V GKE +GA FRD+FD +EPL T+PSHR LA+ RGR +GVL+L + + Sbjct: 198 WSTGLLYSKMVEGKETDGANFRDWFDFNEPLRTLPSHRILALMRGRQQGVLELRVGLEAD 257 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 + + P + + + L+ P W V WTWR+K+L E+EL G +R Sbjct: 258 LEAETPHPCVVRIASFLKLGNGLFALDATPRARWLGEVCRWTWRVKLLTAFESELFGRLR 317 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 E AE EAI VFA NL DLL+AAPAG + +GLDPG+RTG KVAV+D TGK+V T T+YP Sbjct: 318 ESAEAEAIRVFAANLKDLLLAAPAGPKTVLGLDPGIRTGCKVAVIDRTGKVVDTATVYPF 377 Query: 361 TGQAAKA--AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 + + T+AAL +H VEL+AIGNGTASRE+E+ D+ +FP + +V+VSEA Sbjct: 378 EPRRDREGTIKTLAALAARHKVELIAIGNGTASRESEKLVGDMMARFPDLALTRVVVSEA 437 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSASE AA EFPDLDV+LRGAVSIARRLQDPLAELVKIDPK+IGVGQYQHDV+Q + Sbjct: 438 GASVYSASETAALEFPDLDVTLRGAVSIARRLQDPLAELVKIDPKAIGVGQYQHDVNQRE 497 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 LAR LDAVVEDCVNAVGVD+NTAS LL RV+GL ++A+NIVAWRDENG F R L K Sbjct: 498 LARSLDAVVEDCVNAVGVDVNTASAALLARVSGLNTLLAKNIVAWRDENGAFPTRDMLRK 557 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V R G KAFEQ AGFLRI +GDNPLDAS VHPEAYPVVERI+A + ++ ++G L+ Sbjct: 558 VPRFGEKAFEQAAGFLRIPNGDNPLDASAVHPEAYPVVERIVARIKADVRHIIGQREALK 617 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + SDFTDE+FG+PTV DI ELEKPGRDPRPEFKTAQF +GVET+NDL PGM+LEG V Sbjct: 618 GVSPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVV 677 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNV NFGAFVDIGVHQDGLVHIS+L+ KFV+DP VV+ G V VKVLEVD+ RKR+ALT Sbjct: 678 TNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQTVTVKVLEVDVARKRVALT 737 Query: 719 MRLDE--QPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 MRL++ +P G G R + NSAM DA A Sbjct: 738 MRLNDAAEPARRGNGAGAGAARGADRGARRPQADNGKGAPANSAMADAFAK 788 >UniRef50_C1B2S2 Transcriptional accessory protein n=5 Tax=Actinomycetales RepID=C1B2S2_RHOOB Length = 807 Score = 772 bits (1993), Expect = 0.0, Method: Composition-based stats. Identities = 441/768 (57%), Positives = 543/768 (70%), Gaps = 19/768 (2%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + IA E+ R QV AAV LLD G TVPFIARYRKE+TG LDD QLR LE RL YLREL+ Sbjct: 8 QRIAEELAVREGQVAAAVDLLDGGATVPFIARYRKEVTGTLDDAQLRQLEERLRYLRELD 67 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 ERR A+L+SI QGKL D L I +K LED+YLP+KPKRRT+ QIA EAG EP+A Sbjct: 68 ERRDAVLESIDSQGKLDDQLRGQIMTADTKARLEDIYLPFKPKRRTKAQIAREAGHEPVA 127 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 D L +DPS P A+ L+GAR IL+ERFAEDA L+ ++R+ +W Sbjct: 128 DALITDPSTDPASYTAEQ-------------LEGARAILVERFAEDADLVGELRELMWTR 174 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 LVS V GKE EGAKF DYF+ EP +PSHR LA+ RG E VL L+L D + Sbjct: 175 GQLVSAVRKGKETEGAKFADYFEFSEPFGKLPSHRILAVLRGEKEEVLSLTLAPDTEEPV 234 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 P + + E I G+ PAD W V W WR K+++ L + +R+ AE +A Sbjct: 235 PGEATVYEGRIAGRFGIADRGRPADRWLLDTVRWAWRTKMIVTLGIDTRMRLRQSAEKDA 294 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AA 365 ++VFA NL DLL+AAPAG RATMGLDPG RTG KVAVVDATGK+VA +TIYPH Q Sbjct: 295 VDVFATNLRDLLLAAPAGTRATMGLDPGFRTGTKVAVVDATGKVVAHETIYPHQPQNKWD 354 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSA 425 + T+A L K+ VEL+AIGNGTASRET+ ++ + K++VSEAGASVYSA Sbjct: 355 ASLATLAGLVAKYGVELIAIGNGTASRETDALASELIAKSGATNLTKIVVSEAGASVYSA 414 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 S A+ E PDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS+T LAR L A Sbjct: 415 SAYASAELPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSETLLARSLGA 474 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VVED VNAVGVD+NTASVPLL+RV+G+ +A++IVA RD+NG F++R+ L V+RLGPK Sbjct: 475 VVEDAVNAVGVDVNTASVPLLSRVSGIAGSLAESIVAHRDQNGPFRSRKGLKDVARLGPK 534 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 AFEQCAGFLRI +GD+PLDAS+VHPEAYPVV +I+ + +++++GN+S LR+L +DF Sbjct: 535 AFEQCAGFLRILNGDDPLDASSVHPEAYPVVRKIVQTSGTGVREIIGNTSALRSLNPADF 594 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 D++FG+PTVTDII ELEKPGRDPRPEFKTA FA G+E ++ L+PGM LEG VTNV FG Sbjct: 595 VDDRFGLPTVTDIIGELEKPGRDPRPEFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFG 654 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 AFVDIGVHQDGLVH+S++S+ FV+DP VVK+GD+V VKVLEVD R+RI LT+RLD++ Sbjct: 655 AFVDIGVHQDGLVHVSAMSHNFVKDPRDVVKSGDVVTVKVLEVDEARQRIGLTLRLDDEV 714 Query: 726 GETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 G G N+ P+ + R AQ S + G +R Sbjct: 715 GAG----GRKNDGPRGGGAQRQDRSGGAQRQDRSGGAQRQDRSGGAQR 758 >UniRef50_B8D058 RNA binding S1 domain protein n=60 Tax=cellular organisms RepID=B8D058_HALOH Length = 722 Score = 768 bits (1983), Expect = 0.0, Method: Composition-based stats. Identities = 335/731 (45%), Positives = 456/731 (62%), Gaps = 20/731 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN I+ E++ + QV V+LLDEGNTVPFIARYRKE+TGGLD+ Q+R +E RL Sbjct: 1 MNQRIIGQISKELKLKTNQVKGTVKLLDEGNTVPFIARYRKEVTGGLDEAQIRTIEERLE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR L++R++ +++ I EQGKLT +L + I E+EDLY PYK KRRTR A E Sbjct: 61 YLRSLQKRKEEVIRLIEEQGKLTPELEEKIKKASILQEVEDLYRPYKQKRRTRATRAKEK 120 Query: 122 GLEPLADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 GLEPLA L+W+ S PE +Y+ + + + GAR I+ E ++DA + + Sbjct: 121 GLEPLAKLMWTQELTSGNPEDIGKEYINPEVELESIEDVYQGARDIIAEWVSDDAGIRKE 180 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +R +K + ST + ++ K+ Y+D+ EP+S +P HR LA+ RG + VLQ+ + Sbjct: 181 IRKITFKQGVIQSTCKDSETDDEGKYEMYYDYREPVSKIPPHRVLAINRGEKDEVLQVKV 240 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 A + + ++++ + + N+ + ++ + +E E+ ++ Sbjct: 241 LAPEEDIIELIK---DRVVNNPESIFYNDII------EAIKDGYKRLIAPSIEREVRNSL 291 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 E+AE+ AIN+F++NL +LL+ P MG+DP RTG KV VVD TG+L+ T TIYP Sbjct: 292 TEKAEEHAINIFSKNLRNLLLQPPLRGHTVMGIDPAYRTGCKVCVVDPTGRLLDTATIYP 351 Query: 360 HTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 H Q+ +A V L ++ V +AIGNGTASRETE D+ K+ VIV+E Sbjct: 352 HPPQSRTGEAKKVVKGLINEYQVTTIAIGNGTASRETEFMVADIIKELKNTQVNYVIVNE 411 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGASVYSAS+LA +EFP+LDV++RGA+SIARRLQDPLAELVKIDPKSIGVG YQHDV+Q Sbjct: 412 AGASVYSASKLARKEFPELDVAMRGAISIARRLQDPLAELVKIDPKSIGVGLYQHDVNQK 471 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 L + L VVE VN VGVDLNTAS LL VAG+ +A NIV +R+ENG+F+ R +LL Sbjct: 472 NLEKSLGNVVESAVNYVGVDLNTASPSLLKYVAGINSRVASNIVKYREENGKFETRDELL 531 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQ---ALKDLMGNS 594 KV LG K F Q AGFLRI G NPLD + +HPE+Y + +L + D Sbjct: 532 KVKGLGKKTFTQAAGFLRIPDGTNPLDNTPIHPESYQAAKGLLQDVGFKLLDITDKEKLK 591 Query: 595 SELRNLK----ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 L S + G+PT+ DI+ L+KPGRDPR E F V M DL+ Sbjct: 592 EVREELDSINIKSRAEKLETGIPTLKDIVDALKKPGRDPRDELPKPIFRSDVLKMEDLEA 651 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM+L+G V NV +FGAFVDIGV DGLVHIS +S+ +V+DP VV+ GD VKVK+LEVD Sbjct: 652 GMLLQGTVRNVVDFGAFVDIGVKVDGLVHISEMSHDYVDDPLKVVQVGDTVKVKILEVDE 711 Query: 711 QRKRIALTMRL 721 +R RI+L+M+L Sbjct: 712 RRNRISLSMKL 722 >UniRef50_C8RTU2 Histidine triad domain-containing protein n=4 Tax=Bacteria RepID=C8RTU2_CORJE Length = 759 Score = 764 bits (1974), Expect = 0.0, Method: Composition-based stats. Identities = 423/763 (55%), Positives = 544/763 (71%), Gaps = 13/763 (1%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D IIA E++ +V A + LLD G TVPFIARYRKE+TGG+DD+QLR LE RL Sbjct: 4 MTDCIASIIAHELEVDQPRVQATIDLLDGGATVPFIARYRKEVTGGMDDSQLRQLEQRLD 63 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLREL R++ ILKSI EQGKLTD+L + I A +K LEDLYLP+K RRT+ IA EA Sbjct: 64 YLRELAARKETILKSIEEQGKLTDELREKILAVDTKARLEDLYLPFKKSRRTKAAIAREA 123 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GL L + L + S AA YV +G AD + L GAR I++E + D L+ ++R Sbjct: 124 GLGELVEKLLAGGSPD---LAADYVQ--EGFADATSVLAGARAIVVEDISTDPDLVGEIR 178 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + +K S V+ GKEEEG K+RDYF+ EP +PSHR LA+ RG NEGVL+++ Sbjct: 179 EEYFKRGRAESAVIEGKEEEGQKYRDYFEFDEPFGDLPSHRVLALLRGENEGVLRVNFAP 238 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 + + + II D GL+ PAD +R V + WR K+ + ++ ++E Sbjct: 239 GED------DEFYQGIIADRTGLQAQGDPADKFRAECVRFGWRTKLAVSSAVDVRMRLKE 292 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +A++ A++VF++NL DLL+AAPAG RAT+G+DPG R GVK AVVD TGK++ T +YPH+ Sbjct: 293 KADEAAVSVFSKNLKDLLLAAPAGHRATLGMDPGYRNGVKCAVVDGTGKVLDTVVVYPHS 352 Query: 362 GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 GQ KA ++AL KH VEL+A+GNGTASRETE+ ++ Q V++SEAGAS Sbjct: 353 GQWDKARTILSALVNKHGVELLAVGNGTASRETEKLAKEIAGLADGTKPQTVVISEAGAS 412 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSASE+AAQEFPD+DVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV+Q LA Sbjct: 413 VYSASEVAAQEFPDMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQALLAA 472 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VVED VN+VGVD+N AS PLL RVAG+T +A+NIVA+RDENG F++R++LLKV R Sbjct: 473 GLDTVVEDAVNSVGVDVNLASAPLLNRVAGVTPTLAENIVAYRDENGAFKSRKELLKVPR 532 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LGPKAFEQ AGFLRIN +PLD S VHPEAYP+V RI+ AT + L+GNS+ L L+ Sbjct: 533 LGPKAFEQAAGFLRINGAADPLDGSAVHPEAYPLVRRIVDATGVEVVQLVGNSAVLGKLR 592 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 A DF DEKFG+PTVTD++ EL+KPGRDPRP FKTA A+G+ET+ DL+PGM+LEG VTNV Sbjct: 593 AGDFADEKFGIPTVTDVLAELDKPGRDPRPTFKTATLAEGIETIKDLKPGMVLEGTVTNV 652 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 FGAFVDIGVHQDGLVH+S++S +FV+DPH VV +G++VKV+V++VD+ R RI L++RL Sbjct: 653 AAFGAFVDIGVHQDGLVHVSAMSEQFVKDPHDVVSSGEVVKVRVVDVDVPRNRIGLSLRL 712 Query: 722 DEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 ++P A ++ R KPR + Q + +A+ +A Sbjct: 713 QDEPKAPTANGKSKPKK--GARRKPKPRNQAPQGSMAAALKNA 753 >UniRef50_B8HZ35 RNA binding S1 domain protein n=18 Tax=Bacteria RepID=B8HZ35_CYAP4 Length = 763 Score = 747 bits (1929), Expect = 0.0, Method: Composition-based stats. Identities = 367/776 (47%), Positives = 486/776 (62%), Gaps = 25/776 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + +++A E++ +P QV A+ LL EG TVPFIARYRKE TG +++TQLR+L R +YL Sbjct: 3 NLPQLLAAELKLKPFQVANALELLAEGATVPFIARYRKERTGEMNETQLRDLFDRYTYLT 62 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ELEER+ AIL +I++Q KLT DL I A K LEDLYLP++PKRRTR IA E GLE Sbjct: 63 ELEERKTAILAAIAQQDKLTPDLEAKIAACQQKNTLEDLYLPFRPKRRTRATIAREKGLE 122 Query: 125 PLADLL--WSDPSHTPEVAA---AQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 PLA+ L + P+ P A A+Y+ KGV AL GA IL E A+ A L A Sbjct: 123 PLANFLKTLNHPTAVPTDLALAAAKYIAEAKGVRTATDALQGASDILSEEIADKANLRAY 182 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +RDYL L + V G E +F Y + P+ T+P+H LA++RG EGVL + L Sbjct: 183 LRDYLLTTGVLNAKVKGGHPEGTTRFEMYRHYQAPIKTIPAHNLLALYRGEAEGVLVVEL 242 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 D ES LR + + +++ ++ + L TE+ Sbjct: 243 TFDEAAVLADLES---------QELRAKQQEVRDFYRQMLNDAFQRLLKNSLITEVRSAK 293 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 + A+ E+I F NL +LL+AAPAG+++T+ +DPG RTG KV V+D TGK + TI+P Sbjct: 294 KVEADLESIRTFEANLRELLLAAPAGMKSTLAIDPGFRTGCKVVVLDPTGKFLEYQTIFP 353 Query: 360 HTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 H Q KA T+ L +++ VEL+A+GNGTA RET+ F ++ + + V+V+E Sbjct: 354 HQSVEQRQKAGQTLLKLIDRYQVELIAVGNGTAGRETDEFVAELLQTLEPKPVK-VMVNE 412 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 +GAS+YSAS +A EFP+ D+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQHDV Q Sbjct: 413 SGASIYSASPVAIAEFPEQDITVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVDQK 472 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 L +KLD VE CVN VGVDLN AS LLT V+G+T +A NI+ +R++NG F NR+QLL Sbjct: 473 LLKKKLDETVESCVNYVGVDLNLASKELLTFVSGVTPTIAGNIITYRNQNGAFSNRRQLL 532 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 +V++LGPKAFEQ AGFLRI +G NPLD + VHPE Y +VE I L + + L Sbjct: 533 QVAKLGPKAFEQAAGFLRIRNGQNPLDNTAVHPERYNLVETIARDLGVPLAQITQVAERL 592 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 N + + G PT+ DI+ ELEKPGRDPR EF A+F V+ ++DL GM LEG Sbjct: 593 NNTDLKKYVTDTIGEPTLRDILAELEKPGRDPRAEFTFARFRADVKAISDLSVGMQLEGM 652 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VTNV NFGAFVDIGVHQDGLVH+S L+++FV DP +VK G +V V+VLEVD + KRI+L Sbjct: 653 VTNVANFGAFVDIGVHQDGLVHVSQLADRFVSDPKQIVKVGQVVNVRVLEVDEKLKRISL 712 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 +MR E + + P++ R KP AG ++ L A GK R Sbjct: 713 SMRS--DTPERQGQSPVSSPAPKSQRSQPKP------SAGKPPTLEDLKAKFGKHR 760 >UniRef50_A7BUT9 RNA binding S1 domain protein n=1 Tax=Beggiatoa sp. PS RepID=A7BUT9_9GAMM Length = 836 Score = 747 bits (1928), Expect = 0.0, Method: Composition-based stats. Identities = 451/810 (55%), Positives = 568/810 (70%), Gaps = 42/810 (5%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + IA E+ + QV A + LLDEG TVPFIARYRKEITGGLDDTQLR LE RL YLRE Sbjct: 4 IAQRIAEELSVQETQVQATINLLDEGATVPFIARYRKEITGGLDDTQLRTLEERLRYLRE 63 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L+ERR+ IL SI EQ KLT +L AI A KT LEDLYLPYKPKRR+R + A EAGLEP Sbjct: 64 LDERREVILNSIREQNKLTPELETAIKAADIKTRLEDLYLPYKPKRRSRAKAAKEAGLEP 123 Query: 126 LADLLWSDPSHTPEVAAAQYVYA------------------------------------D 149 LA LW +P+ PE AA Y+ Sbjct: 124 LALDLWQNPTLVPEEAATAYIKVATVESTESAEIAESTESTESTESVESTETAESAEKTK 183 Query: 150 KGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYF 209 KG+ + AL+GAR+ILME+FAE+A+LL ++R YLW+NA + VV GKEE+GAKF DYF Sbjct: 184 KGIETVEQALEGARHILMEKFAEEASLLEELRAYLWENAIFKAQVVEGKEEKGAKFADYF 243 Query: 210 DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES----YCEQIIMDHLGLR 265 D+H + +PSHRALAMFRGR EG+LQLSL + + +E + YCE I H + Sbjct: 244 DYHGAIKRLPSHRALAMFRGRKEGILQLSLPVEGKDEEGNVQDVAPTYCEGKIAQHFSIE 303 Query: 266 LNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 ADSW V TWR K+ HL+ +L+ VRE +E+EAI VF NL DLL+AAPAG Sbjct: 304 DQGRSADSWLLETVRTTWRFKMRSHLDAQLLTKVRETSENEAIKVFGTNLQDLLLAAPAG 363 Query: 326 LRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AAKAAMTVAALCEKHNVELV 383 LR TMGLDPGLRTGVKVAVVD TGKLV T TIYPH + ++ + L +H VEL+ Sbjct: 364 LRVTMGLDPGLRTGVKVAVVDKTGKLVDTATIYPHAPRKQWQQSIDKLIELASQHQVELM 423 Query: 384 AIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGA 443 +IGNGT SRET++ D+ KQ P++ K++VSEAGASVYSAS++AA EFPDLDVSLRGA Sbjct: 424 SIGNGTGSRETDKLVTDLMKQHPELGLYKLVVSEAGASVYSASKIAADEFPDLDVSLRGA 483 Query: 444 VSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV 503 +SIARRLQDPLAELVKI+PKSIGVGQYQHDV++ LAR L+AVVEDCVNAVGVD+NTASV Sbjct: 484 ISIARRLQDPLAELVKIEPKSIGVGQYQHDVNKNYLARTLEAVVEDCVNAVGVDVNTASV 543 Query: 504 PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPL 563 LL RV+GL +A+NIV +R+E+G F NR +V R+G K+FEQ AGFLRI +G+NPL Sbjct: 544 SLLGRVSGLNAGLARNIVEFRNEHGIFLNRDTFKQVPRMGEKSFEQAAGFLRIMNGENPL 603 Query: 564 DASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELE 623 DAS+VHPEAYP+VE+I++ + + ++ L+G+ LRNL+ ++T++ FGVPT+TDI++ELE Sbjct: 604 DASSVHPEAYPLVEQIVSGSDKTVQSLIGDVEFLRNLQPENYTNDTFGVPTITDILRELE 663 Query: 624 KPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 KPGRDPRPEFK F +G+E + DL+ M+LEG VTNVTNFGAFVD+GVH DGLVHIS+L Sbjct: 664 KPGRDPRPEFKMPHFKEGIENIEDLEADMVLEGVVTNVTNFGAFVDVGVHHDGLVHISAL 723 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 S +V+DP VVKAGD+VKVKVLE+DL+R+R+ALTM LDE+ + ++P+ Sbjct: 724 SRDYVKDPRAVVKAGDVVKVKVLEIDLKRQRVALTMCLDEEKKREHQNDVPSKKKPKPTT 783 Query: 744 PAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 R R+ ++ ++ +R Sbjct: 784 TNTSGRKRQRNTKRTNSTGQGRSSEQQDRR 813 >UniRef50_B3QUX6 RNA binding S1 domain protein n=2 Tax=Bacteria RepID=B3QUX6_CHLT3 Length = 758 Score = 734 bits (1894), Expect = 0.0, Method: Composition-based stats. Identities = 349/738 (47%), Positives = 484/738 (65%), Gaps = 17/738 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + +++ E+ + QV+ + LLD+G T+PFIARYRKE TGGLD+ QLR L R YL+ Sbjct: 3 NIPQVLTEELSVKLFQVENTLALLDDGATIPFIARYRKERTGGLDEIQLRTLAERYEYLQ 62 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ELE+R++ +LKSI+EQGKLTD+L + I L KTELEDLYLPYKPK+RT+ IA E GLE Sbjct: 63 ELEDRKETVLKSINEQGKLTDELKEKIENCLGKTELEDLYLPYKPKKRTKATIAKEKGLE 122 Query: 125 PLADLLWSDPSHTPEV-----AAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAK 179 PLA+ + S + P AA+Y+ +K V + AL GA IL E+ A+ A A Sbjct: 123 PLAEFIHSLNTAAPAEGNFMEEAAKYISEEKEVKTAEEALQGASDILAEQLADKADFRAY 182 Query: 180 VRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 +R+++ + VS + EE K+ Y + + + H LA+ RG ++GV+ S+ Sbjct: 183 IRNFIMDEGYFVSKIKDEFEEGTTKYEMYRNFKVKVKDIQPHNMLALRRGESDGVVAFSV 242 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 +FDE SY E + NA ++ +V + + L E+ Sbjct: 243 ----EFDEAVVLSYLESQEIF-----TANADLRAFLSKMVKDAFGRLMKTTLIGEVRLDR 293 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 R +A++++I F NL +LL+++PAG++ T+G+DPG RTG K+ +D TGK + TI+P Sbjct: 294 RMKADEDSIKTFEANLRELLLSSPAGMKPTLGIDPGFRTGCKIVAIDETGKFLEYKTIFP 353 Query: 360 HTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 HTG+A KA + L EK+ EL+AIGNGTA RET+ F DV + V+V+E Sbjct: 354 HTGEAKKAKAVEELKTLIEKYKTELIAIGNGTAGRETDIFVRDVIASLETKPVK-VMVNE 412 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 +GASVYSAS +A +EFPDLDVS+RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV Q Sbjct: 413 SGASVYSASPVAIEEFPDLDVSVRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVDQK 472 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 L +KL VE CVN VGVDLNTAS LL+ V+G+ +++N+V +R+E+G FQ+R +L+ Sbjct: 473 LLKKKLGESVESCVNFVGVDLNTASKELLSYVSGINSAISKNVVEYRNEHGAFQSRGELM 532 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 ++ + GPK FEQ AGFLRI G+NPLD + VHPE+Y +V+RI + + S++ Sbjct: 533 QIDKFGPKTFEQAAGFLRIRGGENPLDNTAVHPESYSIVQRIAEDLGVPVAQVTSLGSKI 592 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 +++ + E+ G PT+ DI+ ELEKPGRDPR EF+ A+F+D V+ M DLQ GM LEG Sbjct: 593 KSVDLKKYVTEEVGEPTLIDILNELEKPGRDPREEFRYAEFSDAVKAMEDLQIGMKLEGV 652 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 VTNVT+FGAFVDIGVHQDGLVH+S L++ +V DP VK G IV V+VL+V+L +RI+L Sbjct: 653 VTNVTDFGAFVDIGVHQDGLVHVSELADNYVSDPLEAVKVGQIVTVRVLDVNLSLRRISL 712 Query: 718 TMRLDEQPGETNARRGGG 735 +MR +++ + + Sbjct: 713 SMRSEDRKKTKSGHKNSQ 730 >UniRef50_C9RK55 Tex-like protein protein-like protein n=6 Tax=Bacteria RepID=C9RK55_FIBSS Length = 797 Score = 733 bits (1892), Expect = 0.0, Method: Composition-based stats. Identities = 359/778 (46%), Positives = 505/778 (64%), Gaps = 19/778 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 F IIA E+ +V A+ L+D+G T+PFIARYRK+ TG L++ +LR++ R YL+ Sbjct: 2 DFSAIIAEELNLEVWRVSKALELMDQGGTIPFIARYRKDQTGTLNEIELRDISHRRDYLQ 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL +R++ ILKSI EQGKLT +L I A KT LED+Y P+KPK+RTR IA E GLE Sbjct: 62 ELVDRKETILKSIEEQGKLTPELKAQIEACKDKTLLEDIYAPFKPKKRTRATIAKELGLE 121 Query: 125 PLADLLWSDPSH--TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 PLA L+W+ + T E A Y+ +KG+AD +AAL GA IL E A++A +R+ Sbjct: 122 PLARLMWAQENTGNTAEEIARIYLSEEKGLADPRAALKGAADILAEEVADNAEYRQYLRN 181 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + K +VS V E++ KF+DY+D EP+S +PSHR LA+ RG E VL+LS+ Sbjct: 182 KVEKTGVMVSKVKKDFEKQETKFKDYYDFSEPVSKIPSHRMLALRRGEKEKVLRLSIEVP 241 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + ++ + +++ + + + W + +E+E+ +++ Sbjct: 242 NEEMVGYLQN----------QVIKHDSVWKPYLEDMCKDAWERLLQPSMESEVRLLLKDA 291 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 AE+EA VF++NL D+L+AAPAG +A + LDPG RTG KVAV+D GK + I PH Sbjct: 292 AEEEAFKVFSKNLQDVLLAAPAGHKAVLALDPGFRTGCKVAVLDKNGKFMDHGIIKPHEP 351 Query: 363 --QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 A AA+ + +L +K+ ++L+AIGNGTASRET+ F ++ +F +VIVSEAGA Sbjct: 352 WNDKAGAAVYLMSLIDKYQIDLIAIGNGTASRETDAFCGEMALKFKGKVPPRVIVSEAGA 411 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSAS +A EFP DV+ RGA+SI RRLQDPLAELVK+DP+SIGVGQYQHDV+Q +L Sbjct: 412 SVYSASMIAIAEFPKEDVTTRGAISIGRRLQDPLAELVKVDPQSIGVGQYQHDVNQRELK 471 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 ++LD VVE CVN VGVD+N+AS PLL+ VAGL+ +++ IV +R+ENG + +R+ L KV Sbjct: 472 KRLDEVVESCVNMVGVDVNSASAPLLSHVAGLSNTLSEAIVKYREENGAYASREDLKKVK 531 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 GPKAFEQ AGF+RI +NPLD S VHPE Y +VE++ +K+++GN+ ++ + Sbjct: 532 GFGPKAFEQAAGFMRIPGAENPLDDSAVHPENYALVEKMAEKVGVPVKEMVGNADAVKGI 591 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 K +F ++ G T+ DI+KEL+KP RDPR EF+ A+F D ++T+NDL G +EG VTN Sbjct: 592 KLDEFLSDEVGRATLEDILKELQKPSRDPRKEFRYAKFDDRIKTINDLVTGSWMEGVVTN 651 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V NFGAFVDIGVHQDGLVHIS +S+K+V D V+ GD+VKV+V+ VD +KRI+L+M+ Sbjct: 652 VANFGAFVDIGVHQDGLVHISEISDKYVTDAKDVLTVGDVVKVRVVAVDANQKRISLSMK 711 Query: 721 LDEQPG-ETNARRGGGNERPQNNRPAAKPRGREAQP----AGNSAMMDALAAAMGKKR 773 ++ G G +R R R A+P G++ + D GK+R Sbjct: 712 QEQTDGVAGAGANGPRGQRVGGPRGNFGHRDGGARPQGGIQGHATIADLKNKIAGKER 769 >UniRef50_A7GKE9 RNA binding S1 domain protein n=15 Tax=Bacteria RepID=A7GKE9_BACCN Length = 722 Score = 733 bits (1891), Expect = 0.0, Method: Composition-based stats. Identities = 308/719 (42%), Positives = 438/719 (60%), Gaps = 15/719 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +++ E+ +Q+ ++L +EGNTVPFIARYRKE TG LD+ Q+R + R Y+ + Sbjct: 10 LMKMLVKELGFTEKQIRHVIQLTEEGNTVPFIARYRKEWTGSLDEVQIRAILDRWQYVMQ 69 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LEER++ +++ I E+GKLT++L + I A E+EDLY PYK KRRT+ IA E GLEP Sbjct: 70 LEERKEEVIRLIEEKGKLTEELHQQIIAATKLQEVEDLYRPYKEKRRTKATIAKEKGLEP 129 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ L P A ++ +K V + AL GA+ I+ E ++DA+ +R+ + Sbjct: 130 LAEWLLLFSKEEPLFKAKSFINTEKKVDSAEDALQGAQDIIAEMISDDASYRTWIRNVTF 189 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K + S+V +++E + Y+ + E + + HR LAM RG E +L++S+ + Sbjct: 190 KKGMISSSVKDEEKDEKNIYEMYYGYEEAIQKIVPHRVLAMNRGEKEEILKVSIVPPVEE 249 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 + + + + ++ + +E E+ + E AE+ Sbjct: 250 VLRFLHKKVICDESSKSAM---------YVQLALEDGYKRLIQPSIEREIRKELTEVAEE 300 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--Q 363 +AI++FA NL +LL+ P + + +DP RTG K+AVVD TGK++ D IYPH + Sbjct: 301 QAIHIFAENLRNLLLQPPMKGKVVLAVDPAYRTGCKLAVVDDTGKVLHIDVIYPHPPVKK 360 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A V ++ ++ V+++AIGNGTASRETE F +D + + +IV+EAGASVY Sbjct: 361 YDDAKQKVLSIINQYKVQMIAIGNGTASRETEEFIVDALQDVKQ-DVFYMIVNEAGASVY 419 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SAS+LA +EFPDL V R AVSI RRLQDPLAELVKIDPKS+GVGQYQHDVSQ +L L Sbjct: 420 SASDLAREEFPDLQVEERSAVSIGRRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNESL 479 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVE VN VGV++NTASVPLL V+GL++ +A+NIV R+ENG+F NR +L K+ RLG Sbjct: 480 TFVVETAVNQVGVNVNTASVPLLQYVSGLSKTVAKNIVVKREENGKFTNRAELKKIPRLG 539 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 K +EQC GFLRI G+NPLD +++HPE Y VE +L ++D+ + R Sbjct: 540 AKTYEQCIGFLRILEGENPLDRTSIHPEQYKNVELLLNKIGLTIQDVGTPELQKRLEGVD 599 Query: 604 D---FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 ++ G PT+ DII L P RD R E G+ + DL+ GM LEG V N Sbjct: 600 VSKLSSETNIGEPTLMDIIDALISPERDLRDELPKPLLKKGILKLEDLKRGMELEGTVRN 659 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 V +FGAF+DIGV QDGLVHIS LS +FV+ P +V G IVKV V +VD+++ R+AL+M Sbjct: 660 VVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVKVWVDDVDMKKGRVALSM 718 >UniRef50_B0CAN6 S1 RNA binding domain protein n=11 Tax=Bacteria RepID=B0CAN6_ACAM1 Length = 720 Score = 732 bits (1890), Expect = 0.0, Method: Composition-based stats. Identities = 356/724 (49%), Positives = 477/724 (65%), Gaps = 16/724 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + +I++ E+ P+++ A+ L EG T+PF+ARYRKE TG +D+TQLR L R +YL Sbjct: 3 NIVQILSQELSISPQRLQNALDLFAEGATIPFVARYRKERTGQMDETQLRQLSERFTYLT 62 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ELEER++ IL+SI++Q KLT+ L I A L KTELEDLYLPY+PKRRTR IA E GLE Sbjct: 63 ELEERKKTILESIAQQNKLTELLQAKIEACLLKTELEDLYLPYRPKRRTRATIAKEKGLE 122 Query: 125 PLADLLWSDPSHTP----EVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 PLA L + T ++A Y +K VA T+ AL GA IL E A+ A + + Sbjct: 123 PLAQWLQALNKPTATLSQDLATEAARYINKDVATTEDALQGASDILAEGIADQAEIRTHL 182 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 + ++ VS V S E KF Y + + +H LA++RG EG+L++ L Sbjct: 183 KHRFFQVGEFVSQVKSKYPEGSTKFEMYRSYQARAKNILAHNLLALYRGEAEGILKVELA 242 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 D + E++I + + +GVV + + + E+ + Sbjct: 243 IDEERILG---DIEERVIRSKIR------AVRDFFRGVVKDAYTRLIKPSVVKEVRAACK 293 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 A+ E+I FA NL +LL+++PAG++ T+G+DPG RTG KV +D TGK + I+PH Sbjct: 294 AEADSESIQTFATNLRELLLSSPAGMKPTLGIDPGFRTGCKVVALDHTGKFLEYQAIFPH 353 Query: 361 T--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 GQ +AA TVA L + + ++L+AIGNGTA RET+ F DV K + + V+V+E+ Sbjct: 354 QAVGQRDQAAKTVARLIQTYQIDLIAIGNGTAGRETDAFVADVLKTLDRKPIK-VMVNES 412 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GAS+YSASE+A EFPDLD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV Q Sbjct: 413 GASIYSASEIAIAEFPDLDITVRGAISIARRLQDPLAELVKLDPKSIGVGQYQHDVDQKL 472 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L +KL+ VE CVN VGVDLNTAS LLT V+G+T +A NI+A+R++NG F+NR+QLLK Sbjct: 473 LKQKLEETVESCVNYVGVDLNTASKELLTFVSGITGAIANNIIAYRNQNGAFKNRKQLLK 532 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V++LGPKAFEQ AGFLRI GDNPLD + VHPE+Y VV+ I A + L + + LR Sbjct: 533 VAKLGPKAFEQAAGFLRIRTGDNPLDNTAVHPESYGVVKTISADLELPLSQIAKIPAHLR 592 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + E G PT+ DI+ ELEKPGRDPR EFK A F +G+ + DL+P M LEG V Sbjct: 593 PGDLKTYVTETIGEPTLKDIMAELEKPGRDPRAEFKYATFKEGITELTDLKPEMELEGIV 652 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNVTNFGAFVD+GVHQDGLVHIS ++++FV+DP +VK G +VKV+VLEV+ + KRI L+ Sbjct: 653 TNVTNFGAFVDVGVHQDGLVHISQMADQFVKDPKQIVKVGQVVKVRVLEVNQKLKRIGLS 712 Query: 719 MRLD 722 MR Sbjct: 713 MRST 716 >UniRef50_A0LJC1 RNA binding S1 domain protein n=61 Tax=Bacteria RepID=A0LJC1_SYNFM Length = 788 Score = 732 bits (1889), Expect = 0.0, Method: Composition-based stats. Identities = 363/775 (46%), Positives = 481/775 (62%), Gaps = 18/775 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ +IAGE+ ++ AAV LL EG TVPFIARYRKE TG LD+ ++ + RL+ Sbjct: 26 MNEQHILLIAGELGLPEHRIRAAVELLGEGATVPFIARYRKEATGSLDEMEIAAIRDRLA 85 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 L L++RR +LKS+ EQ KLT++L KA+ S + LEDLYLP++PKRRTR +A E Sbjct: 86 QLDALDKRRATVLKSLEEQEKLTEELRKAVLEAGSLSALEDLYLPFRPKRRTRATVARER 145 Query: 122 GLEPLADLLW-SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GLEPLADL++ + S P A ++V D+ V AL GAR I+ ER E+A A++ Sbjct: 146 GLEPLADLIFAQNDSTDPVAEAERFVDPDRQVVCADDALAGARDIVAERINENAGARARL 205 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 R+ + VV GKE EG ++RDY+D EP++ PSHR LA+ RG EG L L + Sbjct: 206 RELFAGRGTTRARVVPGKEGEGIRYRDYYDWEEPVADAPSHRVLAVLRGEKEGFLTLHIA 265 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 ES + ++PA + ++ + LETE + Sbjct: 266 PLETEALSILESLFVR----------GDSPASRQVAAAAADGYKRLLAPSLETEARQLSK 315 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERA+ EAI VFA NL LLMA P G R + +DPG RTG KV +D GKL+ +T+YPH Sbjct: 316 ERADREAIRVFADNLRHLLMAPPLGARNVLAVDPGFRTGCKVVCLDPQGKLIHHETVYPH 375 Query: 361 TGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 TG+ A KAA + L +E VAIGNGTA RETE F + Q ++V+E+ Sbjct: 376 TGERASAKAAERLRDLVAGFGIEAVAIGNGTAGRETEAFVRGL---GLPTAVQIIMVAES 432 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS +A +EFPD DV++RG+VSI RRL DPLAELVKIDPK+IGVGQYQHDV Q++ Sbjct: 433 GASVYSASAVAREEFPDQDVTVRGSVSIGRRLTDPLAELVKIDPKAIGVGQYQHDVDQSE 492 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L + LD VV CVNAVGV++NTAS LLT V+GL +A+++VA RD NG F++R +L K Sbjct: 493 LKKSLDDVVMSCVNAVGVEVNTASPQLLTYVSGLGPQLARSVVAHRDRNGPFRSRNELKK 552 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V+RLGPKAF+Q AGFLR+ +NPLDAS VHPE+Y +VE + ++ DLM ++ + Sbjct: 553 VARLGPKAFQQAAGFLRVRGSENPLDASAVHPESYHIVEAMARDLGCSVTDLMRDADLRK 612 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + + + G+PT+ DI+ EL KPGRDPR F++ FA G+E DL+ GM L G V Sbjct: 613 RIDPARYVTAHVGLPTLLDILSELAKPGRDPRATFESFSFAQGIEKPEDLRAGMKLPGIV 672 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 TNVT FGAFVDIGVH+DGLVH+S LS+ FV+DP VV+ V V VL+VDL+R RI+L+ Sbjct: 673 TNVTAFGAFVDIGVHRDGLVHVSELSDCFVKDPRQVVRVQQRVTVTVLDVDLERGRISLS 732 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPAAKPR--GREAQPAGNSAMMDALAAAMGK 771 M+ PG + + +RP N G PA + A K Sbjct: 733 MKEGRPPGAESKKTKARGDRPVKNHSPEGAAHHGPTPPPAKGGRFNNPFEKAFKK 787 >UniRef50_C4ZFN3 Transcription accessory protein n=139 Tax=Bacteria RepID=C4ZFN3_EUBR3 Length = 786 Score = 728 bits (1878), Expect = 0.0, Method: Composition-based stats. Identities = 352/771 (45%), Positives = 483/771 (62%), Gaps = 22/771 (2%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 IA E+Q + Q +AAV+L+DEGNT+PFIARYRKE TG L+D LRNL RL+YLR Sbjct: 2 DIIAAIAEELQIKKGQAEAAVKLIDEGNTIPFIARYRKEATGSLNDEVLRNLFDRLTYLR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE+++Q +L SI EQGKLTD+L KAI ++ ++DLY PY+PKRRTR IA E GLE Sbjct: 62 NLEDKKQTVLASIEEQGKLTDELKKAILEAQTQVAVDDLYRPYRPKRRTRATIAKEKGLE 121 Query: 125 PLADLLWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA + + S AA+YV A+K VAD AAL GA+ I+ E +++A K+R+ Sbjct: 122 PLAQTILAQESSVDIMAEAAKYVDAEKDVADEAAALAGAKDIIAENVSDNADYRTKIREL 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + L+ST K E + + Y++ E LS V HR LA+ RG E +L + + A Sbjct: 182 TMQKGRLISTAKDPKAE--SVYEMYYEFDEALSKVAGHRTLAINRGEKEKILTVKIEAPT 239 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + Y ++ ++ + G AP + VV + + +E E+ + E A Sbjct: 240 EDI----IKYLKKQVITNDG-----APTAAVLTEVVEDAYNRLIAPAIEREIRNNLTEEA 290 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 ED AI VF +NL LLM P + +G DP RTG K++VVD TGK++ T IYP Q Sbjct: 291 EDGAIKVFGKNLEQLLMQPPIAGQVVLGWDPAFRTGCKISVVDPTGKVLDTTVIYPTAPQ 350 Query: 364 AA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 +A + L +KH+V L+++GNGTASRE+E+ +++ K+ P V Q +IV+EAGAS Sbjct: 351 NKVDEAKAIIKKLIDKHHVTLISLGNGTASRESEQVIVELLKEIP-VKVQYIIVNEAGAS 409 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSAS+LA +EFP+ DV R A S+ARRLQDPLAELVKIDPKSIGVGQYQHD++Q +L+ Sbjct: 410 VYSASKLATEEFPNFDVGQRSATSMARRLQDPLAELVKIDPKSIGVGQYQHDMNQKKLSE 469 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 L VVEDCVN VGVDLNTASV LL ++G+++ +A+NIV +R+ENG+F +R QLLKV++ Sbjct: 470 ALGGVVEDCVNKVGVDLNTASVSLLEYISGISKTIAKNIVDYREENGKFTSRSQLLKVAK 529 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LGPKAFEQCAGF+RI+ G NPLDA+ VHPE+Y + +L ++D+ + + K Sbjct: 530 LGPKAFEQCAGFMRISDGKNPLDATGVHPESYDATKAVLEKLGYTMEDVKNRNVVGISKK 589 Query: 602 ASDFT----DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 SD+ + G T+ DI+KELEKP RDPR + V M DL PGM+L+G Sbjct: 590 VSDYKALADEAGVGEITLRDIVKELEKPARDPREDMPKPILRSDVLEMKDLTPGMVLKGT 649 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V NV +FG FVDIGVHQDGLVHIS + +++++ P V GDIV V+V+ VDL+++RI L Sbjct: 650 VRNVIDFGCFVDIGVHQDGLVHISEICDRYIKHPLEAVSVGDIVDVQVMSVDLKKQRIQL 709 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 TM++ + + N + A K G ++ D Sbjct: 710 TMKIGQGTDKAGK---SENSGSSKDSAANKADRSNRNNGGRNSRNDRNGTG 757 >UniRef50_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UUG1_RHOBA Length = 750 Score = 726 bits (1875), Expect = 0.0, Method: Composition-based stats. Identities = 369/720 (51%), Positives = 484/720 (67%), Gaps = 14/720 (1%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 + IA E+ +QV A + LL+ GNT+PFIARYRKE+TGGLD+ LR +E L L Sbjct: 40 MQSIARELNLPEKQVAAVIELLEAGNTIPFIARYRKEVTGGLDEIALRAIEDALEKHTAL 99 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 R+ +L +I EQG LT +L K I A LE LYLPYKPKRRTR IA E GL+PL Sbjct: 100 LARKATVLNTIEEQGALTAELRKQIEACTDLRTLEALYLPYKPKRRTRATIAREKGLQPL 159 Query: 127 ADLLWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 ADLL + + +V + VADT AAL GA I+ E+++ED + + + Sbjct: 160 ADLLLKQTKLPQSKQQTLQSFVNQELDVADTDAALAGALDIVAEQWSEDPTVREWMVEKG 219 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K + S V GK++E K+ Y D E S +P HR LAM RG EGVL++ L + Sbjct: 220 TKFGQITSAVKRGKKDEADKYEAYLDRSESASRIPGHRLLAMLRGEAEGVLRVGLKME-- 277 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 E S+ + + + + ++ + ++ ++ ++E+A+ Sbjct: 278 --EDRAISHVKSTFIQNRSFEFARE-----LESAAEDCFQRLLQPATQSTVLQMLKEKAD 330 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 +EAI+VF +NLH+LLM+ PAG R T+G+DPG RTG KVAVVD TGK +A TIYP ++ Sbjct: 331 EEAIDVFGKNLHELLMSPPAGPRVTIGIDPGFRTGCKVAVVDGTGKFLANTTIYPTPPKS 390 Query: 365 AKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 A + AL +KHNVEL+AIGNGTASRET+ F + + K+ KV+VSE+GAS+ Sbjct: 391 DTAGASKQLLALIKKHNVELIAIGNGTASRETDAFVGQLIRD-NKLDVTKVMVSESGASI 449 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSASELA +EFPDLDV++RGA+SIARRLQDPLAELVK DPKSIGVGQYQHDV+QTQL + Sbjct: 450 YSASELAGKEFPDLDVTVRGAISIARRLQDPLAELVKTDPKSIGVGQYQHDVNQTQLRKC 509 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LD VE CVN VGVDLN ASVPLL+RVAG+ +A+NIV +RD NG+F +R++L KV +L Sbjct: 510 LDRTVESCVNRVGVDLNMASVPLLSRVAGIGPKLAENIVQYRDTNGRFGSRKELTKVPKL 569 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G KAFEQ AGFLRI GD PLD S VHPE+Y +V R+ +K L+GN++ + L+ Sbjct: 570 GKKAFEQAAGFLRIRGGDEPLDNSAVHPESYTLVSRMAKQLHADVKTLVGNATLSQKLQP 629 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 F D++FG+PT+ DII EL KPGRDPR EFK AQF D V++M DL+ GM+LEG +TNVT Sbjct: 630 DSFVDDRFGIPTIRDIIAELGKPGRDPRSEFKVAQFDDSVQSMEDLREGMVLEGVITNVT 689 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 +FGAF+D+GVHQDGL+H+S L+N+FV DP VV GD+VKVKVLE+DL RKRIA++ + Sbjct: 690 HFGAFIDLGVHQDGLIHVSQLANQFVSDPSEVVSVGDVVKVKVLEIDLDRKRIAVSKKAL 749 >UniRef50_B3E6B1 RNA binding S1 domain protein n=42 Tax=cellular organisms RepID=B3E6B1_GEOLS Length = 762 Score = 726 bits (1873), Expect = 0.0, Method: Composition-based stats. Identities = 373/744 (50%), Positives = 483/744 (64%), Gaps = 15/744 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +II E R Q+ V LL EG TVPFIARYRKE TG LD+ Q+R +E RL+Y E Sbjct: 11 IEKIITEETGLRQGQISNTVNLLQEGATVPFIARYRKEQTGELDEVQIRTIEERLAYFTE 70 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LE RRQ IL SI EQGKLT +L I AT KTELEDLYLPYKPKRRT+ IA E GLEP Sbjct: 71 LEARRQTILASIDEQGKLTPELQARIEATRQKTELEDLYLPYKPKRRTKATIAKERGLEP 130 Query: 126 LADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 LADL+ + S + AAA +V +K V + AL+GA +IL ER A+DA A VR Sbjct: 131 LADLMAAQELTSGSALEAAAPFVDHEKEVPTPETALEGAGHILAERLADDADCRAMVRRL 190 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 W+ +V+ V S K+E+ KF Y+D+ EPL +PSHR LAM RG E VL+LSL Sbjct: 191 TWEQGVMVTKVASDKKEQVTKFEMYYDYQEPLKEIPSHRMLAMRRGEKEEVLRLSLQVPQ 250 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + L + W + V ++ + +E EL ++ A Sbjct: 251 AEILAGLK----------HRLIKGESVFKPWLESVAEDAYKRLIATSIEVELRLQAKDLA 300 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 ++ AI +FA+NL +LL+A PAG R +G+DPGLR G K+A VD TG+ + TIYPHTG Sbjct: 301 DEAAIAIFAKNLKNLLLAPPAGGRRVLGIDPGLRAGSKLAAVDQTGRFLEHVTIYPHTGA 360 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + +A + L E H +E++AIGNGTA RE E F + + K V+VSEAGAS Sbjct: 361 GRVDQARADLLRLVEAHGIEMIAIGNGTAGREMELFTKETLAKAGK-HLPVVMVSEAGAS 419 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 +YSASE+A +EFP+LD+++RGA+SIARRLQDPLAELVK+DPKSIGVGQYQHDV+Q L + Sbjct: 420 IYSASEIAREEFPELDLTVRGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQAMLKK 479 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD VVE VN VGVDLNTAS LL+ VAG+ + + I RDENG F +R+ LLKVSR Sbjct: 480 SLDEVVESGVNYVGVDLNTASWALLSYVAGVGPALGKAIARHRDENGPFSSRKGLLKVSR 539 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 G KAFEQ AGFLRI G +PLD S VHPE YP+VE++ +L++L + + Sbjct: 540 FGAKAFEQAAGFLRIRGGKHPLDNSAVHPERYPLVEQMAKDLGVSLEELAKTPALAEKID 599 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + ++ G+PT+ DI++EL+KPGRDPR +F+TA F D + ++DLQ GMIL+G VTNV Sbjct: 600 LKKYVSDQVGLPTLRDILEELKKPGRDPRQQFQTADFRDDIREISDLQEGMILQGVVTNV 659 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 T FGAFVDIGVHQDGLVH+S L+N+F++DP+ V+ G +VKVKVL D QRKRIAL+++ Sbjct: 660 TAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVVKVKVLSADPQRKRIALSIKE 719 Query: 722 DEQPGETNARRGGGNERPQNNRPA 745 E G + +P+ + Sbjct: 720 SEPGGAAVRKAASPAAQPKQEPKS 743 >UniRef50_C9KQS8 Protein YhgF n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KQS8_9FIRM Length = 733 Score = 725 bits (1871), Expect = 0.0, Method: Composition-based stats. Identities = 335/739 (45%), Positives = 450/739 (60%), Gaps = 25/739 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ IA E++ +P QV+AA +LLDEGNTVPFIARYRKE TG L+D QLR LE RL Sbjct: 1 MLGKDIYPQIAVELKVQPHQVEAAAKLLDEGNTVPFIARYRKEATGSLEDEQLRELEERL 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 +YLR L +R++ IL I EQGKLTDDL +AI T ELEDLYLPYK K+RTR QIA E Sbjct: 61 AYLRGLVKRQEEILAKIEEQGKLTDDLRRAIEKTRKLQELEDLYLPYKQKKRTRAQIARE 120 Query: 121 AGLEPLADLLW--SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 GLEPLA+ + SD +PE AA + DKGV T+ AL GA I+ E E+A + Sbjct: 121 RGLEPLANRMLLASDQKGSPEAIAAAFCQEDKGVEATEDALQGAMDIVAETVMEEAKIRQ 180 Query: 179 KVRDYLWKNAHLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 +R+++ K L + + EE FR Y + EP+ +P HR LA+ RG G L++ Sbjct: 181 SMREHIAKTGSLQTELAKDAPEESQQVFRMYEAYEEPVHRLPPHRILAINRGEKLGCLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 +L D + C +I + + + + ++ +L L E+ Sbjct: 241 TLATDHE-------DNCRRIERQLHR---APSIWTKYLQLAIEDGYKRLLLPSLTREIRT 290 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTI 357 + E+AE AI++F NL LL+ AP MGLDPG R G K+AVVD TG+++ + Sbjct: 291 ALTEKAEKHAIHLFGVNLRQLLLQAPLAGHTVMGLDPGYRNGCKMAVVDPTGRVLDYGVL 350 Query: 358 YPHTGQAAKAAMT--VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIV 415 A+ A V K+ V L++IGNGTAS ETE+F + + +I Sbjct: 351 QITQSDRAREAAAARVLTSIRKNGVTLLSIGNGTASYETEQFAAALIQDNHLKDVHYLIT 410 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 +EAGASVYSAS+LA +E P+ DV +RGAVSIARR+QDPLAELVKIDP++IGVGQYQHDV+ Sbjct: 411 NEAGASVYSASKLAKEELPEYDVVIRGAVSIARRVQDPLAELVKIDPQAIGVGQYQHDVN 470 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +LA LDA +E VN VGVDLNTAS LL +AG+ A+NI+A+R+E+G F +R++ Sbjct: 471 QKELASTLDATIESAVNHVGVDLNTASAALLRHIAGINATTAKNIIAYRNEHGVFTSRRE 530 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 LLKV RLGP AF QCAGFLRI+ +PLD + VHPE+Y + E+IL L+DL Sbjct: 531 LLKVPRLGPAAFTQCAGFLRIHGAKSPLDNTPVHPESYALAEKILQKLGFTLQDLRAPEQ 590 Query: 596 ELRNLKASDFTDEKF----------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 R DE+ G PTV DI+ L PGRDPR + + + Sbjct: 591 LERMKLKRRLLDERKERELAAALQAGTPTVHDILDALVSPGRDPRADLPAPLTRQAIVKL 650 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 ++L+PG IL G V N+T+FGAFVDIG+H+DGL+HIS L+ + V+ P VV G +++V V Sbjct: 651 SELKPGTILRGTVRNITDFGAFVDIGLHEDGLIHISELAKRRVKHPLEVVSIGQVLRVMV 710 Query: 706 LEVDLQRKRIALTMRLDEQ 724 + VD +R RI L+++ + Sbjct: 711 ISVDEKRGRIGLSLKRVPE 729 >UniRef50_C6E3L9 RNA binding S1 domain protein n=10 Tax=Bacteria RepID=C6E3L9_GEOSM Length = 756 Score = 715 bits (1846), Expect = 0.0, Method: Composition-based stats. Identities = 368/764 (48%), Positives = 488/764 (63%), Gaps = 27/764 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 II E V V LL+EG TVPFIARYRKE TG LD+ Q+R +E L Y R Sbjct: 10 QLLEIIVEESGLPRGGVLQTVALLNEGGTVPFIARYRKEQTGELDEVQIRQIEDLLIYHR 69 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 EL ER+ +LKSI EQGKLT +L+ I + KT+LEDLYLPYKPKRRT+ IA E GLE Sbjct: 70 ELAERKVTVLKSIEEQGKLTPELSARIASCRKKTDLEDLYLPYKPKRRTKATIAREKGLE 129 Query: 125 PLADLLWSDP--SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 PLA+L+ + + +P AAA +V A+ GV D +AAL GA +I+ E+ +E+A L +VRD Sbjct: 130 PLAELIAAQELATGSPTEAAAPFVNAELGVTDAEAALAGAAHIIAEQLSENADLRGRVRD 189 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + S ++ ++ KFR Y D+ EPL ++PSHR LAM RG E VL+L+L A Sbjct: 190 LTREQGIFGSQLMGDGADKDGKFRMYHDYQEPLKSIPSHRMLAMRRGEKEDVLRLALLAP 249 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + + + G + + ++ + +E EL + R Sbjct: 250 EEEIVGRLKGALVKRESIFKG----------ILEAAAADAYKRLIAPSIEVELRLEAKTR 299 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 A++ AI VFA+NL +LL+ PAG R +G+DPGLRTG K+A + TG+ + TIYPHTG Sbjct: 300 ADEAAIAVFAQNLKNLLLLPPAGGRRVLGIDPGLRTGCKLAAISETGRFLEHVTIYPHTG 359 Query: 363 QAAKAAMTVAA--LCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 A A + E+++ L+AIGNGT RETE F D ++ + A+ V+V+EAGA Sbjct: 360 GAKAEAAGAELAGMVERNDCRLIAIGNGTGGRETEIFVRDALRKA-GIKAETVMVNEAGA 418 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 S+YSAS++A +EFP+LD+++RGA+SI RRLQDPLAELVKIDPKSIGVGQYQHDV+QT L Sbjct: 419 SIYSASDIAREEFPELDLTVRGAISIGRRLQDPLAELVKIDPKSIGVGQYQHDVNQTLLK 478 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 + LDAVVE CVN VGVDLN+AS LL+ VAGL+ + IV RDE G F +RQ LLKV+ Sbjct: 479 KALDAVVESCVNFVGVDLNSASWALLSYVAGLSESQGRAIVRHRDEQGAFASRQSLLKVA 538 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 R GPKAFEQ AGFLRI G+NPLD + VHPE Y VVE++ A +L L+ + + Sbjct: 539 RFGPKAFEQAAGFLRIRGGENPLDNTAVHPENYAVVEKMAADLGVSLSQLVADPGLSAGI 598 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + + G+PT+ DI+ EL+KPGRDPR +F++A F + V T+ DL+ GMIL+G VTN Sbjct: 599 RIERYVTDTIGIPTLRDILAELKKPGRDPREQFQSASFREDVVTIADLKEGMILQGVVTN 658 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V FGAFVDIGVHQDGLVH+S L+++F +DP+ VK G IVKVKVL D +RKRI+L+++ Sbjct: 659 VAAFGAFVDIGVHQDGLVHVSQLTHRFTKDPNDAVKVGQIVKVKVLSADPERKRISLSIK 718 Query: 721 LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 E E+ Q N KP+ +E SA A Sbjct: 719 QAE------------PEKAQKNAEVRKPQPKEKPVNEQSAWEKA 750 >UniRef50_D1BNV4 RNA binding S1 domain protein n=5 Tax=Bacteria RepID=D1BNV4_VEIPT Length = 770 Score = 714 bits (1843), Expect = 0.0, Method: Composition-based stats. Identities = 326/731 (44%), Positives = 446/731 (61%), Gaps = 21/731 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ II E+ +P+QV AAV LLDEGNTVPFIARYRKE+TG L D QLR +E R+ Sbjct: 1 MSERMFAIIGSELNVKPKQVQAAVELLDEGNTVPFIARYRKEVTGELQDEQLRTIEERIK 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLR LE RRQ I+ SI+EQ K+TD+L K++ A ELEDLYLPY+PK+RTR IA E Sbjct: 61 YLRNLETRRQEIIASITEQEKMTDELMKSLEAATKLQELEDLYLPYRPKKRTRAMIARER 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLAD++ +D + + Y + V + A+ GA I+ E ++ A A +R Sbjct: 121 GLEPLADMIINDTVTSGDPLEIAKEYITEEVPTPEDAIQGASDIVAEIVSDSADFRAYLR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 +W + + + SG+EEE +F Y ++ EP+ +PSHR LA+ RG G L+L L Sbjct: 181 KKMWNEGFIQAEL-SGEEEEQQQFLQYAEYAEPVRQMPSHRILAVNRGEKLGALKLVLTV 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 E+ + ++ V+ ++ + LE E+ + E Sbjct: 240 PGDTYVAYMVQKLEKN---------PKSIFADYKAAAVADAYKRLIFPALEREIRNELTE 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 A+++AI VF NL +LL+ P MGLDPG RTG K+A++D G ++ Y Sbjct: 291 NADEQAIKVFGVNLKNLLLQPPLAGHVIMGLDPGYRTGCKMAIIDQQGNVLDYGAYYLTN 350 Query: 362 GQ--AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 + +A +A K V L++IGNGTAS ETE+F + ++ + +I +EAG Sbjct: 351 SEKLRKEAQKVLADKIRKFKVTLLSIGNGTASYETEQFASTMIEE-ETLDCHYIITNEAG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSAS+LA E PDLDV++RGAVSIARR+QDPLAE VKIDPKSIGVGQYQHDV+Q QL Sbjct: 410 ASVYSASKLAIDELPDLDVTIRGAVSIARRVQDPLAESVKIDPKSIGVGQYQHDVNQKQL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 LD VVE VN VGV+LNTAS +L VAG++ +A+NIVA+R ENG F++R++LLKV Sbjct: 470 THTLDQVVETVVNHVGVELNTASPAILQHVAGISSAVAKNIVAYRQENGVFKSRKELLKV 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS---E 596 RLGP AF QCAGFLR+ HG NPLD ++VHPE+Y + ERI+ LKDL S Sbjct: 530 PRLGPAAFTQCAGFLRLQHGKNPLDNTSVHPESYELAERIIGELGFTLKDLQDKSQLEAL 589 Query: 597 LRNLKASD----FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 L D GVPTV DI+ L KPGRDPR + V ++ D++ G Sbjct: 590 QVKLPLVDADKMAAKLDAGVPTVRDILAALAKPGRDPREDLPAPLTRKHVVSLEDIKVGT 649 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 +++G V NV +FGAFVD G+ +GL+H S L N + P V+ GDI++ +++ VD++R Sbjct: 650 VVKGTVHNVVDFGAFVDFGLKTNGLLHRSELCNSR-QHPSDVLAVGDIIEAQIISVDVKR 708 Query: 713 KRIALTMRLDE 723 RI L+++ + Sbjct: 709 NRIGLSVKALQ 719 >UniRef50_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3 RepID=Q1ZC98_9GAMM Length = 723 Score = 714 bits (1842), Expect = 0.0, Method: Composition-based stats. Identities = 359/722 (49%), Positives = 482/722 (66%), Gaps = 5/722 (0%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + + ++Q Q++A ++L D GNTVPFIARYRKE T GLDDTQLR LE+ L Y R+ Sbjct: 4 ITQTLHRQLQLSVPQINAFIQLYDAGNTVPFIARYRKEATYGLDDTQLRQLESSLLYQRD 63 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L ER++AI KS+ Q KL+ L I +K +LE LY P+K KR ++ +IA++AGL Sbjct: 64 LAERKEAIYKSLLSQNKLSAALKTQIINIDNKRDLETLYQPFKSKRVSKAKIAMDAGLME 123 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LAD LW + +Y+ +G D K+ L GA IL+ER + D +L K+ + L Sbjct: 124 LADKLWFQDDMQADALLKRYINKKQGFNDEKSVLQGASDILIERLSLDISLSHKLVETLH 183 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + L S+V+ K++E KF+DYFD+ E L T+P+HR LA+ R ++EG L+L ++ D Sbjct: 184 RKGLLSSSVIKAKQQEAQKFKDYFDYSERLKTLPAHRYLALLRAKSEGFLRLKVDFDMHS 243 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 + K+S E +I DHLG +SWRK ++S W+ K+ E ++ ++E+A Sbjct: 244 TD--KKSVYENLIADHLGFSFARLSKNSWRKSIISEAWQTKLNKQTERQIFSLLKEQAHS 301 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA 365 A +FA NL DLLMAAPAG + +GLDPG ++G K+ V+ TGKL+ TIYPH Q Sbjct: 302 RASQLFATNLKDLLMAAPAGEKIILGLDPGFKSGCKIVVISGTGKLLDFATIYPHAPQRQ 361 Query: 366 K--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A V +K++V+L+AIGNGTASRE++ F V + + V+VSEAGASVY Sbjct: 362 SESAKKKVDEFIKKYHVQLIAIGNGTASRESDDFIKSVLEDA-SLNLPCVMVSEAGASVY 420 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SASELA EFP LDVS+RGAVSIARRLQDPLAELVKID K+IGVG YQHD++Q QL + L Sbjct: 421 SASELACIEFPQLDVSIRGAVSIARRLQDPLAELVKIDAKAIGVGLYQHDLNQVQLGKNL 480 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 VVEDCVNA+GVD+N ASV LLT +AGL + +A+NIV +RD NG F +R L+KV RLG Sbjct: 481 QVVVEDCVNAIGVDVNRASVQLLTFIAGLNKSIAENIVQYRDTNGPFTSRSSLMKVPRLG 540 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 KA++Q AGFLRI G +PLD S VHPEAY +V RI +K L+ NS L+ L Sbjct: 541 AKAYQQAAGFLRIIEGIDPLDNSAVHPEAYALVSRIAIDQNCTVKALLKNSQALKMLDID 600 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 F E+FG ++ II EL P RDPRP+F T ++D + ++DL M ++G +TNVT+ Sbjct: 601 TFISEQFGRLSIEQIISELAAPRRDPRPDFCTVSYSDEINKISDLYTDMEIQGVITNVTS 660 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 FGAFVDIGVHQDGL+H+S L+NKFV+DP VVK G IV+V+VL VD +RKRI+L++RL + Sbjct: 661 FGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQVRVLSVDSERKRISLSLRLQD 720 Query: 724 QP 725 Sbjct: 721 HN 722 >UniRef50_A6VTC2 RNA binding S1 domain protein n=2 Tax=Marinomonas RepID=A6VTC2_MARMS Length = 720 Score = 713 bits (1841), Expect = 0.0, Method: Composition-based stats. Identities = 353/721 (48%), Positives = 479/721 (66%), Gaps = 14/721 (1%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 +S ++ E + D ++L +EG TVPFIARYRKE T G+ D LR+ R YL Sbjct: 2 NSISDNLSLEFSILKKYSDNIIQLFEEGATVPFIARYRKENTSGMSDQDLRSFYDRWQYL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 EL++R+++IL +++ ++D + K I +SK ELEDLY P+K R+T+ A E GL Sbjct: 62 VELKKRKESILALLADDSNVSDAIRKKIQNAISKNELEDLYSPFKKTRKTKADEAREQGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 + LA+L+WS A + + V ++AL+G IL E A D+ +L K R Sbjct: 122 QSLAELVWSGERSDTLSAIDAWCKQNNIVMSAESALEGVTEILNEAIANDSDVLKKGRAV 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 L K+ L S V+ GK+E+G KFRDYFD+ E ++ VP HR LA+FRG+ E +L+LS++ Sbjct: 182 LLKDGLLTSRVLRGKKEQGEKFRDYFDYQEAINKVPPHRLLALFRGKKESILKLSVSLKN 241 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWR-----KGVVSWTWRIKVLMHLETELMGT 298 + E+Y + +I HL L+ +S+R + ++ W K+L LET+++ Sbjct: 242 E------ENYPDVLIFPHLNQLLDTNLPESYRVTSLQRKYLNLAWEKKLLPKLETDVLSQ 295 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 +++RAE+ AI VFA NL DLLMAAPAG +G+DPG R GVK+AV+D G L+ IY Sbjct: 296 LKDRAEEGAIQVFADNLQDLLMAAPAGAHRVLGVDPGFRNGVKLAVIDEQGSLLDHGVIY 355 Query: 359 PHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH + +A+ ++ L KHN+ VAIGNGTASRETE + + + + V+VS Sbjct: 356 PHGPQNRTQEASTMLSQLIRKHNIGWVAIGNGTASRETEALVKALISES-NLDCRAVVVS 414 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS +A QEFPDLDV++RGAVSIARR QDPLAELVKIDP++IGVGQYQHDV Sbjct: 415 EAGASVYSASPIAIQEFPDLDVTIRGAVSIARRFQDPLAELVKIDPQAIGVGQYQHDVKV 474 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 L++ L VVEDCVN VGVD+N ASV LL+ V+GLT +AQNIV +R + G+ ++R +L Sbjct: 475 ALLSKSLANVVEDCVNRVGVDINLASVSLLSYVSGLTNRLAQNIVDYRQQKGRIESRSEL 534 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 LK+ +G K FEQCAGFLRI +G LD S VHPE+YP+V+++ A + DL+ NSS Sbjct: 535 LKIKGIGDKCFEQCAGFLRILNGKEALDQSGVHPESYPLVQKMAAQLKLKANDLLNNSSA 594 Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 L+ LK + + G T TDI+ EL KPGRDPRPEF+ A F V+ + D+Q GM LEG Sbjct: 595 LQQLKQFAPSFAQAGDFTYTDILNELAKPGRDPRPEFRYASFDHSVQKLEDVQEGMTLEG 654 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 VTNV FGAFVD+GVHQDGL+HIS L+++FV+DP +V+ G +VKV VLEVD+QRKRIA Sbjct: 655 VVTNVAAFGAFVDLGVHQDGLIHISQLADRFVKDPRDLVRVGQVVKVTVLEVDVQRKRIA 714 Query: 717 L 717 L Sbjct: 715 L 715 >UniRef50_Q21VK3 RNA binding S1 n=5 Tax=Comamonadaceae RepID=Q21VK3_RHOFD Length = 807 Score = 711 bits (1836), Expect = 0.0, Method: Composition-based stats. Identities = 442/798 (55%), Positives = 540/798 (67%), Gaps = 33/798 (4%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 IA E++ + +QV AAV LLD G +VPFIARYRKE T GLDD QLR LE RL YL Sbjct: 2 QKIIAQIAQELRVQNKQVQAAVDLLDGGASVPFIARYRKEATDGLDDIQLRELEARLGYL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 REL +R Q ++K+I EQGKLT +L A+ A SK ELEDLYLP+K KRRT+GQ+A EAGL Sbjct: 62 RELRDRLQTVIKAIDEQGKLTPELLAALVAAASKQELEDLYLPFKLKRRTKGQLAREAGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYAD----------KGVADTKAALDGARYILMERFAED 173 EPLAD L+++P P A YV A + A LDG R IL ER+AE+ Sbjct: 122 EPLADALFANPELVPADEAQAYVIAMRPVVEGEDKQPDFSTVPAVLDGVRDILSERWAEN 181 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEEGA---KFRDYFDHHEPLSTVPSHRALAMFRGR 230 A++ +R++LW+ L S ++ GK+E KFRDYFD+ EP+ VPSHRALA+FRGR Sbjct: 182 PAVVQDLREWLWQEGLLKSKLMDGKDENHPDVAKFRDYFDYDEPIGRVPSHRALAVFRGR 241 Query: 231 NEGVLQLSL---------------NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWR 275 +L L +A + P S E I LG AD Sbjct: 242 GLEILDAKLVVFEPNQAPATVAPEHAAIKTRVAPAVSLAEGRIALRLGWNHQGRAADDLI 301 Query: 276 KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPG 335 + V+WTWR+K+ + E +L +RE AE AI VFA NL DLL+AAPAG R +GLDPG Sbjct: 302 RKCVAWTWRVKLSLSTERDLFTRLREDAERVAIKVFADNLRDLLLAAPAGPRVVLGLDPG 361 Query: 336 LRTGVKVAVVDATGKLVATDTIYPHTGQ--AAKAAMTVAALCEKHNVELVAIGNGTASRE 393 +RTGVKVAVVDATGKLV T T+YPH + + +A LCEKH V L+AIGNGTASRE Sbjct: 362 IRTGVKVAVVDATGKLVDTATVYPHEPRKDWDGSLHILARLCEKHGVSLIAIGNGTASRE 421 Query: 394 TERFYLDVQKQFPKVTAQ---KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL 450 T++ D+ K K + + KV+VSEAGASVYSASE A+QE PD+DVSLRGA SIARRL Sbjct: 422 TDKLAADLIKLMAKSSERLMDKVVVSEAGASVYSASEFASQEMPDVDVSLRGAASIARRL 481 Query: 451 QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA 510 QDPLAELVKIDPKSIGVGQYQHDV+Q +LA+ LDAVVEDCVN+VGVDLN ASVPLL+RV+ Sbjct: 482 QDPLAELVKIDPKSIGVGQYQHDVNQGELAKTLDAVVEDCVNSVGVDLNMASVPLLSRVS 541 Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 GL+ +A+ +V WR+ NG F NRQQLLKV+ LG K FEQ AGFLRI GDNPLD + VHP Sbjct: 542 GLSGSVAKAVVRWREANGAFANRQQLLKVAGLGAKTFEQSAGFLRIRGGDNPLDMTGVHP 601 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 E Y VVERI+A T Q + DLMG + L+ LK F +E FGV TV DI+ ELEKPGRDPR Sbjct: 602 ETYAVVERIIAKTGQPVADLMGRADMLKTLKPELFANETFGVITVKDILGELEKPGRDPR 661 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 P+FK A+F DGVE + DL+ GM+LEG V+NV FGAFVD+GVHQDGLVH+S LS+KFV D Sbjct: 662 PDFKVARFNDGVEDIKDLKEGMVLEGTVSNVAAFGAFVDLGVHQDGLVHVSQLSHKFVTD 721 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +VK GDIVKV+V+EVD+ RKRIALTM+L P ++ + N++ A + Sbjct: 722 AREIVKTGDIVKVQVVEVDVARKRIALTMKLGAAPSRQSSAGDNRFQGVANHQRAGRGAQ 781 Query: 751 REAQPAGNSAMMDALAAA 768 A A A + A A Sbjct: 782 GAAASANPPATSMSSAFA 799 >UniRef50_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NGU9_9LACT Length = 751 Score = 708 bits (1827), Expect = 0.0, Method: Composition-based stats. Identities = 321/730 (43%), Positives = 442/730 (60%), Gaps = 18/730 (2%) Query: 4 DSFCRIIAGEI-QARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 + ++ E+ Q +P+Q+D + LL +GNTVPFIARYRK+ TG LD+ Q+R +E R Y Sbjct: 30 ERSVALVKAELTQYKPKQIDTVLGLLQDGNTVPFIARYRKDQTGSLDEVQIREIEERQRY 89 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAG 122 L E+R++ I + I EQGKLT ++ A++ + T LED+Y PYK KRRT+ IA EAG Sbjct: 90 LENFEKRKEEISRLIDEQGKLTPEITAALSKATTLTALEDIYRPYKQKRRTKATIAKEAG 149 Query: 123 LEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 LEP A L + E AA ++ +KG+ + A++GA I+ E +++A ++R Sbjct: 150 LEPFALWLLMTTKDSVEEKAATFINEEKGILTVEDAINGAVEIIAEWISDEAKYRKQLRQ 209 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 + KN + S V + +E + Y+D+ EP+ ++ HR LA+ R E V+++++ D Sbjct: 210 FTQKNGVVKSVVKKEELDEKKVYEMYYDYEEPVKSIVPHRVLALNRAEKEDVVRVTIEVD 269 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + ++ ++P+ +G + +++ + +E E+ + E+ Sbjct: 270 VTNPLTKIKEE---------KIKNPSSPSAPIVEGAIEESYKRFIGPAIEREIRNELSEK 320 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 A+ +AI +F NL +LL+ AP + +GLDP RTG K+AV+D TGK++ IYPH G Sbjct: 321 AQTQAIAIFGENLKNLLLQAPMKGQVILGLDPAYRTGCKLAVIDETGKVLGKSVIYPHVG 380 Query: 363 ----QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEA 418 + A+A + E++ V LVAIGNGTASRE+E+F + +Q P+ IVSEA Sbjct: 381 ASEAKRAQAGGQFRRIVEQYGVTLVAIGNGTASRESEQFVAEQLRQIPR-KVVYTIVSEA 439 Query: 419 GASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQ 478 GASVYSAS++A QEFPD V R AVSIARRLQDPLAELVKIDPK++GVGQYQHDV + Q Sbjct: 440 GASVYSASDIARQEFPDYQVEERSAVSIARRLQDPLAELVKIDPKAVGVGQYQHDVPEKQ 499 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L +LD VVE VN VGV++NTAS LL +AGLT+ A N+V +RDENG+F NR QL K Sbjct: 500 LDEQLDFVVETAVNKVGVNVNTASAALLEHIAGLTKTTAANVVTFRDENGKFTNRTQLKK 559 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN--SSE 596 V RLGPKA+EQ GFLRI G NP D + +HPE+Y V IL L Sbjct: 560 VPRLGPKAYEQAVGFLRIIDGTNPFDGTDIHPESYDVAIAILKKANAEKLALGSPELEEA 619 Query: 597 LRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 L+ L + +E G T+ ++ L KPGRDPR E V M DLQ GM LE Sbjct: 620 LKGLNTKELKEEFGIGQETLELVMDGLLKPGRDPREEVAGPILRSDVLKMEDLQVGMELE 679 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 G V NV +FGAFVDIGV QDGLVHIS L FV+ P VV GDIV V V E+DL++ R+ Sbjct: 680 GTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVTVWVTELDLKKGRV 739 Query: 716 ALTMRLDEQP 725 L+M E Sbjct: 740 GLSMIGPENK 749 >UniRef50_A6C5P8 Ribosomal protein S1-like RNA-binding domain n=2 Tax=Planctomyces RepID=A6C5P8_9PLAN Length = 828 Score = 705 bits (1820), Expect = 0.0, Method: Composition-based stats. Identities = 296/782 (37%), Positives = 441/782 (56%), Gaps = 26/782 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + IA E+ +Q+ + LLDEGNTVPFI RYRKE TG LD+ Q+R+++ R+ Sbjct: 17 ERDAEQIASELNLTSQQILNVIALLDEGNTVPFITRYRKERTGNLDEVQIRDIQKRVQSK 76 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 R++ ER IL+ I Q +LT +L I + LEDLY PY+PKR +R A + G Sbjct: 77 RQIWERASTILRLIEAQQQLTPELKAEIEKADTLKRLEDLYRPYRPKRTSRAATARKHGF 136 Query: 124 EPLADLLWSDPSHTPEV--AAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 EPLA+ +W+ + + AA QY A+ G T+ L GA IL+E+ ED + R Sbjct: 137 EPLANAIWAGDASIDNLTNAALQYTKAEDGARTTEDVLKGAADILVEKIGEDPDVREISR 196 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 W++ L EE G ++RDYF++ E + VP HR +A+ RG G L++ Sbjct: 197 KIAWRSGKLTVNATKKAEESGQEYRDYFNYSEQVVKVPHHRTMALNRGEKSGALRVRF-- 254 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 E +S C I LN + V++ + L+ E+ + E Sbjct: 255 -----EWADDSACMSIARHL---NLNGHRFHEFLTEVINDALSRLIQPSLDREIRRELTE 306 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +AE A++VFA+NL +LL+ P + + +DPGLRTG K+AV+D G VATD +Y Sbjct: 307 KAEKHAVSVFAQNLKNLLLQPPLQGQRILAIDPGLRTGCKLAVLDELGYCVATDLVYVTG 366 Query: 362 GQAAK--AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 K A +A + +H +LVAIGNGTA RETE ++ +Q A+ +IV+EAG Sbjct: 367 SADKKEFARKKLAEVMTEHQCQLVAIGNGTACRETEEIITEMIEQ-DLPQARYLIVNEAG 425 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 AS+YSAS +A +EFPDLD ++RG +SI RRLQDPL+ELVKIDP+ +GVG YQHDV+ +L Sbjct: 426 ASIYSASPVAREEFPDLDATIRGTISIGRRLQDPLSELVKIDPQHLGVGMYQHDVNSKRL 485 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 LD V+E CVN VGV+LNTAS LL V+G+ +++A+ I WR+++G FQNR+QLL V Sbjct: 486 KESLDEVIESCVNYVGVNLNTASASLLRHVSGMNQLIARRITEWREKHGSFQNRKQLLDV 545 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 + +G F Q AGFL+I+ G PLD++ +HPE+Y ++ + L ++ + + Sbjct: 546 AGVGEATFTQAAGFLKIDQGSEPLDSTWIHPESYEHAYKVFEQLELPPDSLKSSAQDRAS 605 Query: 600 LKASD--------FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 + + K G+PT+ DI++ + +P RDPR + F GV + L G Sbjct: 606 IIEKVGQIDKGGLSKNLKIGLPTLEDILEAIVRPRRDPRADLPGPIFKQGVLKLEQLTEG 665 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 M L+G V NV +FGAFVD+G+ L+H+S ++N F+E+P+ V GD++ VL VDL+ Sbjct: 666 MELQGTVLNVVDFGAFVDVGLKDSALIHVSEMANHFIENPYQFVSVGDVITAWVLGVDLE 725 Query: 712 RKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGK 771 R+R++LT+ +PG + +PA+ + A + + Sbjct: 726 RRRVSLTLI---RPGTDRQPKKAQRPTKPAEKPASAKTAKPATASAKKTADSGNNTGHQQ 782 Query: 772 KR 773 K+ Sbjct: 783 KK 784 >UniRef50_D0LLY3 Tex-like protein protein-like protein n=9 Tax=Bacteria RepID=D0LLY3_HALO1 Length = 801 Score = 703 bits (1814), Expect = 0.0, Method: Composition-based stats. Identities = 359/742 (48%), Positives = 482/742 (64%), Gaps = 18/742 (2%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 +A E+ E+V A V LL EGNTVPFIARYRKE+TGGLD+ Q+R +E R +YL ELEER Sbjct: 13 LAEELGLPAERVAAVVGLLSEGNTVPFIARYRKEVTGGLDEVQIRTIEERRTYLLELEER 72 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADL 129 RQ+IL SI EQGKLT +L + A +K ELEDLYLPYKPKRRTRG +A E GL PLA+ Sbjct: 73 RQSILSSIEEQGKLTGELRAKLLACTTKAELEDLYLPYKPKRRTRGMMARERGLLPLAER 132 Query: 130 LWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARY------ILMERFAEDAALLAKVRD 182 + + P+ P AA +V A V + D I+ E AE+A + A VR Sbjct: 133 ILAQPAEGDPRAEAAAFVRAGDDVDKDQRVADADAALAGARDIVAEMTAENAEVRAFVRQ 192 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 LVS V+GK + KF Y++ E + T+P+HR LA+ RG EG+L+ + Sbjct: 193 SFADEGVLVSEAVAGKTDAPTKFEQYYEFSEAVKTIPAHRFLAIRRGEAEGILRARVELA 252 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 P+ P Q+ +D ++P ++ ++R + +E ++ ++ R Sbjct: 253 PE---PVLMRIELQMGLDR------SSPFSGQMSEAIADSYRRLLAPSVENDMRVELKMR 303 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 ++ A++VFA N+ +LL+AAP G RA +G+DPGLRTG K A VD+TGK + T Y G Sbjct: 304 SDRAAVDVFADNVRNLLLAAPLGTRALIGVDPGLRTGCKCAAVDSTGKFLGHMTFYLTKG 363 Query: 363 QA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 + + A K + V +GNGT RET F ++ + +VSEAGA Sbjct: 364 ERAVEQGRREFLAFLSKFDPVGVTVGNGTGGRETAAFVRQALREAGREELFVALVSEAGA 423 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 SVYSAS++A +EFP+LD+++RGA+SIARRLQDPLAELVKI+PK+IGVGQYQHDV Q LA Sbjct: 424 SVYSASDVAREEFPELDLTIRGAISIARRLQDPLAELVKIEPKAIGVGQYQHDVHQPLLA 483 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 +KL VVE CVN VGV+LNTAS PLL+ V+G+ + +A+ IV+ R++NG F+ R+QLL VS Sbjct: 484 KKLGEVVESCVNHVGVELNTASAPLLSYVSGIGKSVAKKIVSHREQNGAFRTREQLLAVS 543 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 LGPKAF+Q AGFLRI G+ LD+S VHPE Y +V RI A +++L+G+S + Sbjct: 544 GLGPKAFQQAAGFLRIRGGEQVLDSSAVHPERYDLVLRIAADLGVGIQELVGDSKLAERI 603 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + + G PT+ DI+ EL+KPGRDPR EF+ +F D V T+ DL+P M LEG VTN Sbjct: 604 DIARYIGDGVGEPTLRDIVDELKKPGRDPRDEFEPPRFRDDVNTLEDLKPEMQLEGVVTN 663 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VT+FGAFVD+GVHQDGLVHIS LS++FV+DP VVK GD +KV+VL+VDL RKRIAL+ R Sbjct: 664 VTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVRVLDVDLARKRIALSAR 723 Query: 721 LDEQPGETNARRGGGNERPQNN 742 D E RGG N++ ++ Sbjct: 724 SDGGRKEQERGRGGRNDQERSG 745 >UniRef50_B1ZSU7 RNA binding S1 domain protein n=9 Tax=Bacteria RepID=B1ZSU7_OPITP Length = 794 Score = 694 bits (1790), Expect = 0.0, Method: Composition-based stats. Identities = 352/794 (44%), Positives = 464/794 (58%), Gaps = 27/794 (3%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 N +A E+ + QV A +LL EG TVPFIARYRKE+TG LD+TQ+ + RL + Sbjct: 5 NPDHVLRLAQELNVKVFQVAATAQLLAEGATVPFIARYRKEVTGELDETQVLAIRDRLDH 64 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAG 122 L ++ERR AIL S+ E+ LT L +AI A + T LEDLYLP++PK+RTR IA E G Sbjct: 65 LTAVDERRAAILSSLKERSLLTPALEQAIQAADTLTALEDLYLPFRPKKRTRATIAKEKG 124 Query: 123 LEPLADLLWSDPSHTP-----------EVAAAQYVYADKGVADTKAALDGARYILMERFA 171 LEPLA+LL++ T E A + AL GAR I+ ER + Sbjct: 125 LEPLAELLFAQDPATDAVAAAQAYVGREYVADDGKNQKSKIETVDEALAGARDIIAERIS 184 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEE--EGAKFRDYFDHHEPLSTVPSHRALAMFRG 229 +D ++R +A + S V+ GK+ E AK++DYF+ EPL+ PSHR LAM RG Sbjct: 185 DDKDARTRLRARYQSDAIVSSKVLIGKDADPEAAKYKDYFEWSEPLAKAPSHRILAMRRG 244 Query: 230 RNEGVLQLSLNADPQFD---EPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 E L + + + E + + N+ + V+ + Sbjct: 245 EKESFLMMRVTLPDETLAVAEVAPLFVKAARVAPNASSSTLNSTCSDQVQLAVADACKRL 304 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 + +ETE+ ++RA++ AI VF N+ +LL+A P G +A + +DPG RTG KV ++D Sbjct: 305 LCPAMETEMRLDSKKRADEAAIRVFTGNMRELLLAPPLGQKAVLAIDPGFRTGCKVVLLD 364 Query: 347 ATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFP 406 GKL+ D ++P +A +A + NVE +AIGNGTA RETE F + Sbjct: 365 RQGKLLHNDVVFP-DRHEQEARDKLAGFVQFFNVEAIAIGNGTAGRETEAFVRKL---GL 420 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIG 466 T V+V+E+GAS+YSASE+A +EFPD D+++RGAVSI RRL DPLAELVK+DPKSIG Sbjct: 421 PATIPIVMVNESGASIYSASEVAREEFPDHDLTVRGAVSIGRRLMDPLAELVKLDPKSIG 480 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE 526 VGQYQHDV Q L R LD V VN VGV+LNTAS LL+ V+GL A IVA R+E Sbjct: 481 VGQYQHDVDQIALKRSLDDTVVSSVNGVGVELNTASKQLLSYVSGLNATTAAAIVARRNE 540 Query: 527 NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQA 586 +G F++R +L +V RLGPKAFEQ AGFLRI H +PLDAS VHPE Y +VE++ A Sbjct: 541 HGPFKSRAELKEVPRLGPKAFEQAAGFLRIRHATHPLDASAVHPERYALVEKMAADLGAT 600 Query: 587 LKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 + DLM LK + G+PT+ DI+ EL KPGRDPR +F+ F V Sbjct: 601 VADLMREGKLRAKLKLEAYVTADVGLPTLNDIMAELAKPGRDPREKFEAFAFDANVHEPK 660 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL+PGM L G VTNVT FGAFVDIGVHQDGLVHIS L++ FV+D TVVK V V V+ Sbjct: 661 DLKPGMKLPGIVTNVTAFGAFVDIGVHQDGLVHISQLADTFVKDAATVVKPQQKVTVTVV 720 Query: 707 EVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGRE-------AQPAGNS 759 EVDL R RIAL+MR + + G + G + +++P A A S Sbjct: 721 EVDLARNRIALSMRSNPEIGPRPSSGPGTATPSSRSFSSSRPSSGPRSGSPAPAPRAPQS 780 Query: 760 AMMDALAAAMGKKR 773 D +AA+ KKR Sbjct: 781 LNSDWFSAALNKKR 794 >UniRef50_C5D4D6 RNA binding S1 domain protein n=44 Tax=cellular organisms RepID=C5D4D6_GEOSW Length = 728 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 332/735 (45%), Positives = 458/735 (62%), Gaps = 17/735 (2%) Query: 1 MMN-DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 M+N ++ +IA E+ +QV + L +EGNTVPFIARYRKE+TG LD+ Q+R++ + Sbjct: 1 MLNREALMDLIANELHLSTKQVSNVISLSEEGNTVPFIARYRKEMTGALDEVQIRDILEK 60 Query: 60 LSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAI 119 +YL+ LE+R++ +L+ I EQGKLTDDL AI ++EDLY PY+ KRRT+ IA Sbjct: 61 WNYLQNLEQRKEEVLRLIDEQGKLTDDLKNAIINATKLQQVEDLYRPYRQKRRTKATIAK 120 Query: 120 EAGLEPLADLLWSDPSHT-PEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 E GLEPLA+ LW+ P PE A +++ +K V + AL GA+ I+ E+ ++DA Sbjct: 121 EKGLEPLAEWLWTCPMRPRPEEKAQEFIQPEKEVRTVEEALQGAKDIIAEKVSDDAQFRQ 180 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 +R + WK ++STV + +E + Y+++ EP+ + HR LA+ RG EGVL++S Sbjct: 181 WIRQHTWKKGVIISTVKESENDEKKVYEMYYEYEEPVHRIVPHRVLALNRGEKEGVLRVS 240 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + A + + + + +PA S + ++ + +E ++ Sbjct: 241 IQAPVEDIMTYLQKHI---------ITNPQSPAASLLSEAIEDGYKRLIEPSIERDIRNE 291 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E+AE+ AI++FA NL LL+ P + +G+DP RTG K+AVVD TGKL+ D IY Sbjct: 292 LTEKAEERAIHIFAENLRKLLLQPPLKGKIVLGIDPAYRTGCKLAVVDETGKLLKIDVIY 351 Query: 359 PHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVS 416 PH Q +A + + E+++VE++AIGNGTASRETE+F D KQ K +IV+ Sbjct: 352 PHPPQQQIEEAREKLIRIIEEYHVEMIAIGNGTASRETEQFVADTLKQVDK-EIFYLIVN 410 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 EAGASVYSAS+LA QEFPDL V R AVSIARR+QDPLAELVKIDPKS+GVGQYQHDVSQ Sbjct: 411 EAGASVYSASDLARQEFPDLQVEERSAVSIARRVQDPLAELVKIDPKSVGVGQYQHDVSQ 470 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 +LA+ L VVE VN VGV++NTASV LL V+GLT+ +++NIV R+E G+F+NR++L Sbjct: 471 KKLAQSLQFVVETVVNQVGVNVNTASVSLLQYVSGLTKTVSENIVKRREEQGKFKNREEL 530 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 + RLG K +EQC GFLRI GD PLD + +HPE Y V+R+L + + Sbjct: 531 KSIPRLGAKTYEQCIGFLRIIDGDEPLDRTPIHPERYEEVKRLLHQIGFTTEHIGSEELR 590 Query: 597 LRNLKA---SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + G T+ DII L +P RDPR E + M DL+ GM Sbjct: 591 QALQSLSIPDTAAELGIGELTLQDIIDALIRPERDPRDELPKPLLRKDILKMEDLKRGME 650 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 LEG V NV +FGAFVDIGV QDGLVHIS LS ++V P VV GD+VKV V VDL + Sbjct: 651 LEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQYVRHPLDVVSVGDVVKVWVDNVDLDKG 710 Query: 714 RIALTMRLDEQPGET 728 RI+L+M E+ +T Sbjct: 711 RISLSMIPPEESEKT 725 >UniRef50_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding domain) n=14 Tax=Bacteria RepID=A9NHV1_ACHLI Length = 724 Score = 690 bits (1780), Expect = 0.0, Method: Composition-based stats. Identities = 288/732 (39%), Positives = 427/732 (58%), Gaps = 27/732 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ ++ E++ +V + LL +G T+PFIARYRKE+TGG+D+ Q+ + Sbjct: 1 MNEQLVMSVSKELKLPTAKVKVVLELLADGATIPFIARYRKEMTGGMDEEQIFAINQMFE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y L +R++ +++ I E+G LT++L I + E+EDLY PYK K++T+ AI Sbjct: 61 YANNLFKRKEDVIRLIDEKGMLTEELKNEILSATKLVEVEDLYRPYKEKKKTKATEAIAK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA L + P A +Y+ + V TK AL+GA +I+ E ++DA +R Sbjct: 121 GLEPLAKFLLTFPKTDVVEEAKKYL--NDEVLTTKDALEGAGFIISELISDDANYRKYLR 178 Query: 182 DYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 DYL+++ LVS + + + + Y+D+ + ++ + H+ LA+ R +E V+ + L Sbjct: 179 DYLFRHGVLVSNLRKNGKELDVKGVYEIYYDYSQSITKIKPHQILAINRAEDEKVITVKL 238 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 + + E + + AD + + + + + + +E E+ + Sbjct: 239 DGTKEAMENYLIK----------QVIKKPSNADMYLEEAIKDSLKRLIFPSIEREIRSEL 288 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 E+ +++AI VFA NL LL+ P + +G+DP RTG K VVD TG+++ IYP Sbjct: 289 SEKGQEQAIEVFADNLSKLLLQPPLKGKVILGIDPAFRTGCKWTVVDQTGQVLEKGVIYP 348 Query: 360 H---------TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA 410 H + +A + + L +K+ ELVAIGNGTASRETERF ++V K + A Sbjct: 349 HETTQGGRPDPEKVFQAELQLKVLYKKYKFELVAIGNGTASRETERFVVEVIK-NQNMDA 407 Query: 411 QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY 470 + VIV+EAGASVYSAS++A +EFPD V R A SIARRLQDPL+ELVKIDPKSIGVGQY Sbjct: 408 KYVIVNEAGASVYSASDVAREEFPDFSVEERSAASIARRLQDPLSELVKIDPKSIGVGQY 467 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 QHD++ +L L+ VV VN VGV+ NTAS LLT V+GL++ +A+N+V +R++ G F Sbjct: 468 QHDIAPKKLDDSLNFVVTQVVNQVGVNANTASKSLLTYVSGLSKNVAENLVNYRNKIGGF 527 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 ++R+ LLKV LGPK +EQ GFLRI D LD +++HPE+Y + ++ + +D+ Sbjct: 528 KSREDLLKVPSLGPKTYEQAVGFLRIPESDEILDQTSIHPESYQLAREVMKKLNISSEDI 587 Query: 591 MGNSSELRNLKASD---FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 S L + T+ I+ P RDPR ++ V ++ D Sbjct: 588 GKPSIRLWTDNIDREQVARELHTDKYTLDLILDAFVAPMRDPRDDYAQPILKSDVLSIED 647 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 L+ GM LEG V NVT+FGAFVD+G+ DGLVHIS LSNKFV+ P VV G IV V VL Sbjct: 648 LKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVTVWVLN 707 Query: 708 VDLQRKRIALTM 719 +D + ++ LTM Sbjct: 708 IDRDKGQVGLTM 719 >UniRef50_B2A6S4 RNA binding S1 domain protein n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6S4_NATTJ Length = 727 Score = 687 bits (1773), Expect = 0.0, Method: Composition-based stats. Identities = 299/731 (40%), Positives = 435/731 (59%), Gaps = 22/731 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDE-GNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ + ++ E +V A+ L+ E GNTVPF+ARYRK TG L + +LR++ R Sbjct: 1 MDQKILKQVSQEENFPESKVAKAINLIKEAGNTVPFVARYRKNETGNLSEDELRSIVERW 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 YL L++R+ I+ ++ ++ KLT +L +AI + + ELE+LY PYK K++TRG A E Sbjct: 61 DYLVNLQDRKAEIIATLEKREKLTPELKEAIQKSETMQELEELYKPYKQKKKTRGMKAKE 120 Query: 121 AGLEPLADLLWSDP---SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALL 177 GLEPLA+ L E A+ ++ ++GV T AL GA+ I+ E+ +E Sbjct: 121 KGLEPLANKLRQGELKTEAEAESTASDFIDDEQGVNSTDEALQGAQDIIAEQISETVDNR 180 Query: 178 AKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 V++ +L + + ++E ++DY+D+ E L +P HRA+A+ RG EGVL++ Sbjct: 181 RDVKEIAAPETYLETQLKDQAQDENKVYQDYYDYRENLKKMPLHRAMAINRGEKEGVLKV 240 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 SL++ + +++ + L N + V + ++ ++ EL Sbjct: 241 SLSSPEE-------RIIDKVALRELVSLENAGFSRELVFEAVKDACKRLIIPSIQRELRT 293 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTI 357 + E+AE+ AI +F++NL LLM P + MG+DP ++G K+AVVD G + D I Sbjct: 294 SKTEQAEEHAIKIFSQNLERLLMQPPIKGKNVMGIDPAYKSGCKIAVVDYKGDMQEVDVI 353 Query: 358 YPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFP-KVTAQKVI 414 YP + +AA V +L K+ VE++AIGNGTASRETE F + + + Q I Sbjct: 354 YPTPPFNKTEQAAKKVISLLNKYQVEIIAIGNGTASRETEEFVSETIEDVELSLEVQYAI 413 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 VSE GASVYSAS+LAA+EFP+LDV R A+SIARR+ DPLAELVKIDPKSIGVGQYQHDV Sbjct: 414 VSEDGASVYSASKLAAEEFPELDVQERSAISIARRVIDPLAELVKIDPKSIGVGQYQHDV 473 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 Q++L + VVE VN VGVD+NTASV LL ++GL + A+N+V R E G F +R Sbjct: 474 PQSKLKEAVQFVVEKVVNQVGVDVNTASVHLLRYISGLNKKSAENMVNTRSELGGFDSRA 533 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 QL +V LG K FEQCAGFLRI G NPLD + +HPE+Y + E I+A + +++ + Sbjct: 534 QLTEVKGLGAKTFEQCAGFLRILDGSNPLDKTAIHPESYHIAEGIIAHLNEVPENIGSEA 593 Query: 595 SELRNLKASDFTDE--------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 + ++ T+ DI+ L+KP DPR EF + V + Sbjct: 594 LRTGVDSLLNNKNQIQSLCQEFDTDKYTLEDILTGLKKPLYDPREEFDKPRLKKDVMKLE 653 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 DL GMILEG + NV +FGAFVD+G+ +DGL+HIS+LS KFV+ P +V GD+V+V+++ Sbjct: 654 DLSEGMILEGEIRNVVDFGAFVDLGIKEDGLIHISNLSEKFVKHPMEIVSVGDVVQVEIV 713 Query: 707 EVDLQRKRIAL 717 +D R RI L Sbjct: 714 SIDKDRGRIGL 724 >UniRef50_C2M5J9 S1 RNA binding domain protein n=5 Tax=Flavobacteriaceae RepID=C2M5J9_CAPGI Length = 723 Score = 683 bits (1762), Expect = 0.0, Method: Composition-based stats. Identities = 313/717 (43%), Positives = 442/717 (61%), Gaps = 19/717 (2%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 + I ++ + ++ + LL EG T+PFIARYRK+ TG LD+ + + + + Sbjct: 20 IQFIKAQVSTTEKAIENTLTLLSEGCTIPFIARYRKDRTGNLDEVAIEKIAKAQADYENI 79 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 +R++ IL S+ EQGKLT++L K I A+ TELEDLYLPYK KR+T+G +A E GLEPL Sbjct: 80 CKRKETILSSVEEQGKLTEELRKRIEASYELTELEDLYLPYKKKRKTKGDVAKENGLEPL 139 Query: 127 ADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWK 186 A L S E A +Y+ VA + AL GA I+ E E+ + +R + Sbjct: 140 AKQLMSQRVTDMEQLALRYLS--DKVATVEDALQGASDIIAEWINENMYVRRTLRRVFQR 197 Query: 187 NAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 A L + V GKE EE K+ YFD EPLS PSHR LAM R EG ++L + + + Sbjct: 198 KAQLCTEVAKGKENDEEAQKYAQYFDWSEPLSKAPSHRVLAMLRAEKEGFVRLKVQVETE 257 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 P E + N + K + +++ + + E + V+++A+ Sbjct: 258 DTLPFIEETIIK----------GNGQTADFLKKAIKDSYKRLLEPSISNETLQEVKDKAD 307 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 +AI VF+ NL LL+++P G + + +DPG RTG KV +D G L+ +TI+PH Q Sbjct: 308 AKAIEVFSDNLSQLLLSSPLGEKRILAIDPGFRTGCKVVCLDEKGDLLHNETIFPHAPQH 367 Query: 365 AKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 A + + E++ +E ++IGNGTASRETERF ++ P Q +VSEAGASV Sbjct: 368 ETAMAMKKIRTMVEQYRIEAISIGNGTASRETERFIKEISFPHP---LQVFVVSEAGASV 424 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS++A +EFP DV++RGAVSI RRL DPLAELVKI+PKSIGVGQYQHDV+QT L ++ Sbjct: 425 YSASKIAREEFPTYDVTVRGAVSIGRRLSDPLAELVKIEPKSIGVGQYQHDVNQTLLEQE 484 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LDA V CVN VGV+LNTAS LL+ V+G+ MA+NIVA+R NG F+ R+ L KV RL Sbjct: 485 LDATVIRCVNKVGVNLNTASGSLLSYVSGIGEKMAENIVAYRSTNGAFRRREDLKKVPRL 544 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K ++Q FLR+++ +NPLD S VHPEAYP+++++ +++ L+GN + + Sbjct: 545 GDKVYQQAVAFLRVHNSENPLDNSAVHPEAYPIIKQMAKDLGISVEKLIGNKQAISTIDI 604 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 + +E+ G + D++KELEKPG DPR K +F V+T +D++ GMIL G V N+T Sbjct: 605 KKYKNEEVGELYLKDVLKELEKPGLDPRKTAKVFEFDPNVKTFDDVRVGMILPGIVNNIT 664 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 FG FVDIG+ + GLVHIS L + +V + VVK + V+VKV EVD RKRI+L+M Sbjct: 665 AFGCFVDIGIKESGLVHISQLKDGYVSEVSEVVKLHEQVQVKVTEVDTARKRISLSM 721 >UniRef50_A9BHM7 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BHM7_PETMO Length = 720 Score = 681 bits (1756), Expect = 0.0, Method: Composition-based stats. Identities = 299/729 (41%), Positives = 429/729 (58%), Gaps = 29/729 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I ++ + Q + V LL+EGNTVPFI+RYRKE TG LD+ ++R +E Y + Sbjct: 2 DIIKTITEDLNIKLFQTENTVELLNEGNTVPFISRYRKERTGNLDEEKIRRIEELFKYYQ 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE ++ +LKSI +QGKLTD L + I T TELEDLYLPYK +++T AIEAGLE Sbjct: 62 NLEGYKKTVLKSIEDQGKLTDALKEKIINTKKMTELEDLYLPYKKRKKTNADKAIEAGLE 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 P A+ + + + + + + +G YI+ + FA D +R + Sbjct: 122 PAANKVLLGNIKSLDELEE---FVSEEYDNIDKVTEGISYIIGQTFAHDKENRESLRKHY 178 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K + S EE K+ Y + + +S +P++R LA+ RG E VL + L D + Sbjct: 179 EKFGKIHSEKKKEFVEEATKYDMYHEFTQEISKIPNYRVLALNRGEKEKVLNVKLIIDDE 238 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 + E K Y + N D + + + + +E E+ + E+AE Sbjct: 239 WLEKEKSRY-----------KTGNEICDKIISKGLIYGFTNMLNPSIEREIRQNLTEKAE 287 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 + AI +FA+NL LL+ P + + +DPG RTG KV +D G +A DTI+P Q Sbjct: 288 EGAIVLFAKNLRQLLLTPPLKNKRVLAIDPGFRTGCKVVALDEMGNFLANDTIFPVPPQN 347 Query: 365 A--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + + L +K+NV L+AIGNGTASRET++F +D+ K+ K+ + + V E+GASV Sbjct: 348 DIENSEKIMMGLIQKYNVNLIAIGNGTASRETQQFVVDLIKK-NKLNLKYIFVDESGASV 406 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS+LA +EFP+ DV++RGA+S+ RR+QDPLAE VKIDPKSIGVGQYQHDV+Q +L K Sbjct: 407 YSASKLAKEEFPEYDVTVRGAISLGRRIQDPLAEFVKIDPKSIGVGQYQHDVNQKKLKEK 466 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 LDA VE VN VGV+LNTAS LL V+G+T +A+ IV +R +NG F R LL V Sbjct: 467 LDATVESVVNLVGVNLNTASYSLLEYVSGITSSLAKKIVQYRQKNGSFNKRADLLNVKGF 526 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD-LMGNSSELRNLK 601 G KAFEQ AGFLRI G+NPL+ + +HPE+Y E+++ L D + + LK Sbjct: 527 GEKAFEQSAGFLRIIDGENPLEITGIHPESYEAAEKLINIHGYRLDDLKIKEKLDPLKLK 586 Query: 602 ASDFTDEK-----------FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 S +EK G T+ DI+KEL+KPGRDPR E Q D + DL+ Sbjct: 587 VSQLLNEKENLKSISEELEIGEYTLIDILKELQKPGRDPRDEMPQPQLMDDILKFEDLKE 646 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 M L G +TN+T+FGAFVD+G+ ++GL+H S+L+ +FV P +V+ DIV+V+++ +D Sbjct: 647 SMRLSGKITNITDFGAFVDLGIKENGLIHKSNLAERFVAHPTDIVQINDIVEVEIINIDK 706 Query: 711 QRKRIALTM 719 R+RI L + Sbjct: 707 TRRRIGLRL 715 >UniRef50_A5WHC1 RNA binding S1 domain protein n=4 Tax=Moraxellaceae RepID=A5WHC1_PSYWF Length = 849 Score = 672 bits (1735), Expect = 0.0, Method: Composition-based stats. Identities = 355/780 (45%), Positives = 481/780 (61%), Gaps = 31/780 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + +A E+ +P QVDA V+L DEG TVPFIARYRKE T GLDD+QLR LE L+Y R Sbjct: 38 NIHNKLAKELGIKPAQVDAFVKLYDEGATVPFIARYRKEKTQGLDDSQLRALEKGLNYER 97 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 ++ RR IL+ + QG LT+ L I SK ELED+YLPY+P+RR+ A AGL+ Sbjct: 98 DMASRRAKILELLQSQGNLTEALQSRIEQATSKLELEDIYLPYRPRRRSLAAKARAAGLD 157 Query: 125 PLADLLWSDPSHTPEVAAAQYVYA----------DKGVADTKAALDGARYILMERFAEDA 174 +A L ++ + + + D +DT+ L G I+++ + ++ Sbjct: 158 KVAKTLLNNEVTPLDALSDYSLPETITDDTGAEIDVDFSDTEKQLAGVEAIIIDGWTQEL 217 Query: 175 ALLAKVRDYLWKNAHLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 LL +R K A + S++ K E G KF DYF+H E L+ +P+HR LAM RGR E Sbjct: 218 ELLDNLRSGFAKTATINSSLASDEKREVGEKFADYFEHSESLARLPNHRLLAMLRGRQEN 277 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 VL L ++ + + +++I + + W+ K HLE Sbjct: 278 VLVLKVDGEDA-------PFVDKVINKFELENTKPQERHDFLITAANSLWKDKWRPHLEH 330 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 L+ R AE +AI+VFA NL LLMAAPAG + +G+DPG+R GVK+AV+DA G+++ Sbjct: 331 RLLTEKRLAAEADAIDVFASNLQHLLMAAPAGRKVILGVDPGIRHGVKMAVIDAQGQVMQ 390 Query: 354 TD-------TIYPHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ 404 T+YP +A T+A L + H VELVAIGNGTASRET+ ++ + Sbjct: 391 DGEGKPAIATVYPFAPDNKMDEAKATIAQLLKDHQVELVAIGNGTASRETDAMIKELIEA 450 Query: 405 FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKS 464 +TA+ V+V+E+GASVYSASELA+ E DLDVS+RGAVSIARRLQDPL+ELVK++PK+ Sbjct: 451 DETITAKAVVVNESGASVYSASELASDELADLDVSIRGAVSIARRLQDPLSELVKVEPKA 510 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWR 524 IGVGQYQHDV+Q QL+ LD V +DCVNAVGVD+NTAS +L +AGL R +AQ IV +R Sbjct: 511 IGVGQYQHDVNQAQLSDSLDKVTQDCVNAVGVDVNTASPAILAHIAGLNRNVAQQIVNYR 570 Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ 584 E+G F NR+QL V RLG K FEQ AGFLRI G+ PLDA+ VHPE+Y +V+ +L + Sbjct: 571 KEHGAFTNREQLKDVPRLGVKTFEQAAGFLRIRDGEEPLDATGVHPESYDLVKALLDKSG 630 Query: 585 QALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVET 644 +++ D++GN S + L ++ I +EL KP DPRPEFKTAQF D V + Sbjct: 631 KSIADVLGNDSLINTLSTDGIDAANDDNISIAAIKQELAKPAHDPRPEFKTAQFRDDVNS 690 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++DL+ GM LEG VTNVT FG FVD+GVHQDGLVHIS ++N FVEDP +VK GDIV V+ Sbjct: 691 VSDLEEGMQLEGVVTNVTGFGCFVDVGVHQDGLVHISEMANDFVEDPMNLVKPGDIVSVR 750 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNA----RRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 V+ +D +R RI +M+ ++ A R N +PA + A+PA +A Sbjct: 751 VISIDAKRNRIGFSMKSEDAASAKRATSPQRSTDKNAENAATKPAKARKNSRAKPANKAA 810 >UniRef50_O31489 Uncharacterized protein ydcI n=35 Tax=cellular organisms RepID=YDCI_BACSU Length = 719 Score = 671 bits (1730), Expect = 0.0, Method: Composition-based stats. Identities = 304/721 (42%), Positives = 447/721 (61%), Gaps = 17/721 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + IA EI + V++ +RLL++GNTVPFIARYRKE TG +D+ Q++ + R Y++ Sbjct: 7 LKQQIAKEIGLSQKHVESVIRLLEDGNTVPFIARYRKEQTGSMDEVQIQTISERWQYIQN 66 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L +R++ +++ I+EQ KLTD+L + I ++ E+EDLY PYK KR+T+ +A GLEP Sbjct: 67 LNQRKEEVIRLIAEQDKLTDNLKRKIEQSVKLQEVEDLYRPYKQKRKTKATVAKSKGLEP 126 Query: 126 LADLLWSDPSHTPEVA-AAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 LAD + + P A A QY+ +K V + A++GA++I+ E+ +++ +R Sbjct: 127 LADYILTLPQDDHLAATADQYISEEKEVFTREEAIEGAKHIIAEQISDEPTFRKWIRQET 186 Query: 185 WKNAHLVSTV-VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 +K + S S +E + Y+++ EP++ V HR LAM RG E +L++++ Sbjct: 187 FKRGTIKSAAGKSADTDEKNVYEMYYEYEEPIAKVVPHRVLAMNRGEKEDILKVAIEPPA 246 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 ++Y E+ I+ + + + + +++ + +E E+ + E+A Sbjct: 247 DHI----KAYLEKQIIKNRSTSV-----REILQETIEDSYKRLIQPAIEREIRKELSEKA 297 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 +++AI++F+ NL LL+ P + +G+DP RTG K+AV D TGK++ D IYPH Sbjct: 298 DEQAIHIFSENLRKLLLQPPMKGKTVLGVDPAFRTGCKLAVSDETGKVLKIDVIYPHAPV 357 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + +A V + E++ VE+VAIGNGTASRETE+F ++V + P+ VIV+EAGAS Sbjct: 358 NKTKEAHEKVKKILEQYQVEMVAIGNGTASRETEQFIVNVLRDMPR-KIYYVIVNEAGAS 416 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSASELA +EFPDL V R AVSIARRLQDPLAELVKIDPKS+GVGQYQHDVSQ +L Sbjct: 417 VYSASELAREEFPDLKVEERSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLNE 476 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 L VVE VN VGV++NTAS LL VAGL++ +A N+V R+E G+F NR++L + R Sbjct: 477 SLRFVVETVVNQVGVNVNTASAALLQYVAGLSKSVAGNVVKKREEIGKFSNRKELKDIPR 536 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG K +EQC GFLR+ G PLD + +HPE+Y + +L + + + + + + Sbjct: 537 LGAKTYEQCIGFLRVQEGTEPLDRTGIHPESYKETKALLKKLGLSTEHIGTAELKDKINQ 596 Query: 602 A---SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + G T+ DI ++L +P RDPR + V + DL+ GM L+G V Sbjct: 597 LALSETAKELGIGEITLKDICEQLTRPERDPRDKVPKPLLKTDVLQLEDLKEGMELQGTV 656 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 NV +FGAFVDIGV QDGLVHIS LSN+FV+ P VV GDIV V V VD+Q+ R++L+ Sbjct: 657 RNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVTVWVDGVDVQKGRVSLS 716 Query: 719 M 719 M Sbjct: 717 M 717 >UniRef50_B1MZ34 Transcriptional accessory protein n=12 Tax=Bacilli RepID=B1MZ34_LEUCK Length = 733 Score = 669 bits (1727), Expect = 0.0, Method: Composition-based stats. Identities = 300/736 (40%), Positives = 427/736 (58%), Gaps = 26/736 (3%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + + + +A + +Q A + LL +G TVPFI+RYRKE+TGGLD+ Q+ +++ Sbjct: 12 ITDTDLAKQVAEHLTIGVKQTTATLELLRDGATVPFISRYRKEMTGGLDEVQIHDVQVTA 71 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 ++++L +R++ +LK+I+ Q KLT L AI + ++EDLYLPYK K+RT+ IA E Sbjct: 72 RHIKDLTDRKKTVLKAIATQQKLTATLQAAIITAATLQDVEDLYLPYKQKKRTKAMIARE 131 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+PLAD + + + E+ Y+ + +AD A L G I+ E+ E A + Sbjct: 132 NGLQPLADFVLTH--LSEEIPTEAYI--NDALADAAAVLAGLHEIIAEQIGEKAIYRQWL 187 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAK--FRDYFDHHEPLSTVP--SHRALAMFRGRNEGVLQ 236 R+ + ++ L TV EE+ A+ + Y+D+ E L ++ + R LA+ RG +GVL Sbjct: 188 RERMQRDGFLTVTVKRDGEEKDAQGVYAQYYDYSESLKSLQMNTFRILAVNRGEKDGVLS 247 Query: 237 LSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELM 296 + ++ + I + + ++ + ++ + + EL Sbjct: 248 VKIDFSEERMRHF-------IQIKERNGQGDSGEGYQVLLSAIDDAYKRFIQPAVARELR 300 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDT 356 + A+ +AI VF NL+ LLM AP + MG DPG RTG K+A++DA G+ + + Sbjct: 301 QELTVLAQGQAIKVFGDNLYHLLMQAPLKNKIVMGFDPGFRTGSKLAIIDANGRFLKKEV 360 Query: 357 IYPHTG----QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQK 412 IYPH Q +AA +L + +V LVAIGNGTASRE++ F + Q Sbjct: 361 IYPHKPASEKQRQEAAKRFQSLIHEFDVALVAIGNGTASRESQEFVANNL----PSGVQY 416 Query: 413 VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQH 472 IV+EAGASVYSASE A EFP L V R A+SI RR+QDPLAEL+KIDPKS+GVGQYQH Sbjct: 417 SIVNEAGASVYSASEEARSEFPQLHVEERSAISIGRRIQDPLAELIKIDPKSVGVGQYQH 476 Query: 473 DVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQN 532 D++ L ++ VVE VN VGV+LNTAS PLLT +AGL +AQNIV +RD NG F + Sbjct: 477 DLNTKMLDEQVGQVVEKAVNQVGVNLNTASTPLLTHIAGLNTTLAQNIVDYRDNNGVFTS 536 Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R L K+ RLGPKA+EQ AGFLRI G N LD + +HPE+Y +++L + L Sbjct: 537 RIDLKKIPRLGPKAYEQAAGFLRILDGKNILDNTDIHPESYAAAKKLLDLADITAQQLAT 596 Query: 593 NSSELRNLKASD---FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 + R + + G+ T+ DI+ L+KPGRD R E A V + DLQ Sbjct: 597 APANERLTRYDNQMTANQLGIGIETLHDIVGSLKKPGRDGRSEMVGALLKSDVLHIEDLQ 656 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 PGM L+G V NV +FGAFVD+GV DGLVHIS L + V+ P +V GDIV V V+EVD Sbjct: 657 PGMKLQGTVRNVVDFGAFVDLGVKHDGLVHISRLVKRRVKHPSEIVSVGDIVNVWVVEVD 716 Query: 710 LQRKRIALTMRLDEQP 725 +R+RI LTM E+ Sbjct: 717 QKRQRIGLTMIAPEEK 732 >UniRef50_D2MLP5 S1 RNA binding domain protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MLP5_9FIRM Length = 749 Score = 669 bits (1725), Expect = 0.0, Method: Composition-based stats. Identities = 288/765 (37%), Positives = 426/765 (55%), Gaps = 25/765 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ + IA E+ + +QV+ + LL EGNTVPFIARYRKE T GLD+ Q+ + Sbjct: 1 MNEQIIQNIAKELNIQLDQVEHTLSLLQEGNTVPFIARYRKEATKGLDEEQILFIRKHFD 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y +L ER++A+LK I+EQGKLT +L K + A +++ED+Y PY K++TR A++ Sbjct: 61 YQNKLAERKEAVLKLIAEQGKLTPELEKEVQACEKLSQVEDIYRPYAQKKKTRATEAVKK 120 Query: 122 GLEPLADLLWSDP-SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+PLAD L P + E A ++V + V + + AL GAR I+ E ++ A + Sbjct: 121 GLQPLADWLLGLPIEGSIEEMAEKFV--NDQVTNVEEALQGARDIIAEFVSDKAKQRWRF 178 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 ++++ + + + + ++E + Y+D E ++ V HR +A+ R E V+ +SL Sbjct: 179 KEFILTSGQIQTKLKKDAQDEKHTYEMYYDRIEKINHVADHRIMAIDRAEKEKVITVSLV 238 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 D + E L+ A + +E E+ + Sbjct: 239 YDKEHLEQEALE---------ELLKGEKTIAQEQLAFASKDGCERLLFPSIEREIRSDLS 289 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 ERA+ ++I +F+ NL LL AP R +G DPG G K+AV+D TGK++A I+P Sbjct: 290 ERAQGKSIEIFSMNLEKLLSQAPLKGRVVLGFDPGFFNGCKLAVIDETGKMLAVQKIFPF 349 Query: 361 TGQAAK---AAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSE 417 + + + + + L +++ V++VAIGNGTASRE+E+ DV ++ + IVSE Sbjct: 350 SKKGEELEVSKKKLWQLIQRYQVQIVAIGNGTASRESEKLVADVIRENQ-LDISYAIVSE 408 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 AGASV+SA E A EFPDL V R AVSI RRL DPLAEL+KIDP+SIGVGQYQHD+ Q Sbjct: 409 AGASVWSAQEEARAEFPDLAVEERSAVSIGRRLLDPLAELIKIDPQSIGVGQYQHDLPQK 468 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 +L +L+ VN G DLNTAS LLT ++GL +AQ IV +R+ENG+F NR QLL Sbjct: 469 KLTERLEEATMKVVNRTGADLNTASKELLTHISGLNAGIAQEIVKYRNENGRFTNRNQLL 528 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 KV +LGPKA+ Q AGFLRI G+ PLD +++HPE+Y +++ A + + Sbjct: 529 KVKKLGPKAYTQSAGFLRIKGGEEPLDQTSIHPESYEAARQVMEAYGITQLGQKEVTMDG 588 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 + T+ DI + + +P RD R +F A V ++ DL G L G Sbjct: 589 SKDQL-----LGIDAYTLKDIKEAIRQPLRDYRDQFDGALLKSDVLSLEDLHVGDQLSGT 643 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V NV +FGAF+DIG+H+DGL HIS ++ K P ++ GDIV V V E+D+ R R+ L Sbjct: 644 VRNVVDFGAFIDIGLHEDGLAHISHMAMKKFNHPSEILSVGDIVTVWVYEIDINRNRVQL 703 Query: 718 TM----RLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGN 758 ++ +L E+ + R+ N + + R G Sbjct: 704 SLLPLEKLKEREAQVKYRKSAKNRKSKKKITMEDALSRLTARFGK 748 >UniRef50_C1SJZ4 Transcriptional accessory protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SJZ4_9BACT Length = 706 Score = 667 bits (1721), Expect = 0.0, Method: Composition-based stats. Identities = 297/722 (41%), Positives = 415/722 (57%), Gaps = 20/722 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M + E + ++ + L GNTVPFIARYRKE+TG +D +RN+ R Sbjct: 1 MQEKLFT----EFSFQRNHINNVIDLHLSGNTVPFIARYRKEMTGNMDAEDIRNIIERYE 56 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YL LE+R+Q ++++I E+GKLTD+L K+I + E+EDLY PYK K++T+ +A EA Sbjct: 57 YLENLEKRKQEVIEAIDERGKLTDELKKSIMKAETMKEVEDLYAPYKSKKKTKADLAREA 116 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + ++ A + V D A+ A I+ E D + A++R Sbjct: 117 GLEPLAVYIRANADLGGLS-AEAEKFVCDAVPDADTAVSMASDIVTEEIGHDPEIKARLR 175 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + N + S + +E + DY+D + + VP HR LAMFRG E +L+L + Sbjct: 176 ELYELNGEISSIQKTD-SKERNPYEDYYDFRQKMRDVPPHRVLAMFRGEREKILKLKIEI 234 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 D C M+ + K + ++ + + LE E G ++E Sbjct: 235 DEDMCLNAIAKICAGKGMED----------NEITKKSMRQAFKKMLELSLELEFRGELKE 284 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 + E +AI+VFA NL +LL+ R MG+DP RTG K AVVD TG L+ +YP Sbjct: 285 KGEIKAISVFAENLKNLLLTPTVRNRVIMGIDPAFRTGCKFAVVDTTGDLLDYGVMYPTK 344 Query: 362 GQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 QA K+ + K++V +AIGNGTASRETE F V + ++ Q IVSEAG Sbjct: 345 PQADYQKSRSIMLESIRKNSVNAIAIGNGTASRETEEFVASVISE-DELDIQYTIVSEAG 403 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSA +A +EFP+LDVS+RGA+SIARR+ DPLAELVKIDPKSIGVG YQHDV+ +L Sbjct: 404 ASVYSAGAVAKREFPELDVSIRGAISIARRVLDPLAELVKIDPKSIGVGMYQHDVTGKKL 463 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 + L VVED VN VGVDLNTAS LL+ V+GL+ +A+ IV R G+F++R++L+KV Sbjct: 464 EKSLTDVVEDVVNNVGVDLNTASPSLLSYVSGLSDSLAEKIVKHRQSIGRFKSRKELMKV 523 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +G F Q AGFL++ G LD+ +HPE+Y V L A + +++ Sbjct: 524 DGVGELTFRQSAGFLKVYGGGEKLDSMFIHPESYDAVYAFLEAVNLSSDKCELVKLAVKD 583 Query: 600 LKASDFTD-EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + G T+ DII LEKP RD R F G+ ++ L+ G +L G V Sbjct: 584 KNVKSLAEKLGIGEFTIKDIIDNLEKPDRDIRDNVDPVVFKQGILSIESLKEGDVLTGKV 643 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 +NV +FGAFVD+G+ DGLVHIS L+++FV DP VVK G VK KVL VD +R R++L+ Sbjct: 644 SNVVDFGAFVDVGLKNDGLVHISQLADRFVSDPSEVVKVGQTVKTKVLSVDRERGRLSLS 703 Query: 719 MR 720 M+ Sbjct: 704 MK 705 >UniRef50_D1AUZ7 RNA binding S1 domain protein n=7 Tax=Fusobacteriaceae RepID=D1AUZ7_STRM9 Length = 762 Score = 662 bits (1709), Expect = 0.0, Method: Composition-based stats. Identities = 293/730 (40%), Positives = 449/730 (61%), Gaps = 19/730 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M + + ++ E+ +Q++ ++L DEG T+PFI+RYRKE+TG LD+ Q+R++ +++ Sbjct: 1 MENKIFKYVSKELNIGLKQIEETMKLYDEGATIPFISRYRKEVTGNLDEEQIRDVVEKIT 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y R LE+R++ +++ I EQG LT +L K+IN +EDLY+PYK K++T+ IAIE Sbjct: 61 YYRNLEKRKEEVIRLIEEQGALTPELEKSINEATVLQRVEDLYMPYKKKKKTKADIAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + + Y + + + AL+G I ++ +E+ +R Sbjct: 121 GLEPLAIFAKDEKITIDILKEEANKYINDNILSVEDALEGVHLIHAQKISEEITNREYLR 180 Query: 182 DYLWKNAHLVSTV--VSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSL 239 + L + + +VS + + +E ++DY++ E S + +HR LA+ RG NE +L+++L Sbjct: 181 NLLSQKSLVVSKLIEKNKGLDEKQVYKDYYNFQEAYSKIVTHRILAINRGENEKILKVNL 240 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 D + E+++ + N S+ +V+ + + +E EL + Sbjct: 241 EIDD--------NVREELVNKMYHMNFKNDNLKSFFIDIVNDSIDRLMYPSIENELRNIL 292 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 E+AE EAI FA NL LL+ P + +GLDPG RTG K+A++D G +D +Y Sbjct: 293 TEKAELEAIENFATNLEKLLLQPPLNKKTILGLDPGYRTGAKLAIIDKDGFFKESDVVYL 352 Query: 360 -----HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVI 414 Q A + K++V++VAIGNGTASRETE F + K++ + +I Sbjct: 353 VKEMHSEKQLETARNKILKYLSKYDVDIVAIGNGTASRETESFVAALLKEYKEKKVSYII 412 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 V+EAGASVYSAS++AA EFP+LDV++RG +SI+RRLQDPLAELVKIDPKSIGVG YQHDV Sbjct: 413 VNEAGASVYSASKVAADEFPELDVTVRGTISISRRLQDPLAELVKIDPKSIGVGMYQHDV 472 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +Q +L +L+ +E VN VGV++NTAS LL+ V+G+ + +A+NIV +R ENG F+NR+ Sbjct: 473 NQKKLNEELEQTIEKIVNRVGVNINTASAELLSFVSGIKKNIAKNIVEYRKENGDFKNRK 532 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 ++LKV LG KAFEQ AGF+ I +G+NPLD + +HPE+Y + E IL+++ + +L + Sbjct: 533 EILKVKGLGAKAFEQLAGFVVIPNGENPLDNTIIHPESYHIAEEILSSSSTNVNELKTDL 592 Query: 595 SELRNL----KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 +R + ++ T D+ + L K RDPR EF + + ++ DL+ Sbjct: 593 ELVREKLKLVNLQNIIEKTGLDKTTKDVYEALIKDRRDPRDEFDKPLLREDILSIEDLKV 652 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 GM LEG V NVT FGAFVDIG+ D ++HIS LSN F++DP V+ G I+KV+VL++D+ Sbjct: 653 GMELEGTVRNVTKFGAFVDIGLKNDAMIHISELSNSFIDDPTKVLSIGQIIKVRVLDIDI 712 Query: 711 QRKRIALTMR 720 QR R+ LT + Sbjct: 713 QRGRVGLTRK 722 >UniRef50_C4L139 RNA binding S1 domain protein n=2 Tax=Exiguobacterium RepID=C4L139_EXISA Length = 709 Score = 662 bits (1708), Expect = 0.0, Method: Composition-based stats. Identities = 292/719 (40%), Positives = 419/719 (58%), Gaps = 21/719 (2%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 +A + + QV+ +L EG T+PF+ARYRKE+TG LD+ +++ + L Y Sbjct: 1 MITKVANALNLKVNQVETVQQLASEGATIPFMARYRKEMTGNLDEVEIKGILDALQYEES 60 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 L++R+ +L + E K T +L KA+ A + ++ED+YLPY+PKRRT+ + E GL+P Sbjct: 61 LQKRKADVLAKLEELEKNTPELTKALEAATTLQQVEDIYLPYRPKRRTKAEQGREKGLQP 120 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LAD ++ + + + AL I+ E + E+A L +RD + Sbjct: 121 LADWFRDKSPYSLDEVKELSQDVE-----VEEALPLVHAIIGEEWGEEAKLRQMLRDRVR 175 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K L S E+E F Y+++ E ++ + HR LA+ RG VLQ+ + D Sbjct: 176 KEGLLRSKKKKQAEDEKEIFAQYYEYEEKIAGIVPHRVLALNRGERTDVLQVKVVFDESR 235 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 E++ + + V+ ++ V +E E+ G + E+AE+ Sbjct: 236 FMDQALRTYERLPKEK----------REVVEAAVTEAYKKSVFPAIEREIRGELTEKAEE 285 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA 365 +AI+VF++NL L M P +G+DP RTG K AVV+ GK+ YP + Sbjct: 286 QAIDVFSKNLKQLYMQPPLREVVVLGIDPAYRTGCKWAVVNEIGKVEEVGVFYPTAPKHD 345 Query: 366 --KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 A + L +K+ + ++ +GNGTASRETE+F D K+ + IV+EAGASVY Sbjct: 346 IAGAEKVLTRLAKKYPISVIVVGNGTASRETEQFVADWLKKAER-DIAYAIVNEAGASVY 404 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 SASE+A EFPDL V R AVSIARR+QD +AELVK+DP+S+GVGQYQHDVSQ +L L Sbjct: 405 SASEVARSEFPDLKVEERSAVSIARRIQDAMAELVKVDPQSVGVGQYQHDVSQNKLKASL 464 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 + VVE VN VG+D+N AS LLT V+GL + A+NIVA+R+ENG+F+ R+++ KV RLG Sbjct: 465 EFVVESVVNMVGIDVNRASESLLTYVSGLNKTTAKNIVAYREENGRFETRKEIKKVPRLG 524 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 KAFEQ AGFLRI +G + LD + +HPE+YP+ IL + ++ + R + Sbjct: 525 AKAFEQAAGFLRIMNGKDVLDQTEIHPESYPLALSILKEIGSSKSEVGTAALRERLQQVD 584 Query: 604 DFT---DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + G+PTV DI+K L KPGRDPR + + V ++ DLQ GM +G V N Sbjct: 585 AKALSEQLEAGLPTVEDILKSLAKPGRDPREDIQKPLLRTDVMSLEDLQVGMEFQGTVRN 644 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 V +FGAFVDIGV QDGLVHIS LSN++V+ P VV GDIV V + +VD+ R RI+LTM Sbjct: 645 VIDFGAFVDIGVKQDGLVHISKLSNRYVKHPLDVVAVGDIVTVWIEQVDVNRGRISLTM 703 >UniRef50_C7RH14 RNA binding S1 domain protein n=4 Tax=Anaerococcus RepID=C7RH14_ANAPD Length = 699 Score = 658 bits (1697), Expect = 0.0, Method: Composition-based stats. Identities = 286/719 (39%), Positives = 426/719 (59%), Gaps = 29/719 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I++ +++ + ++A +LLDEG+TV FIARYRKE TG L D ++R +E L+ R Sbjct: 2 NITEILSKQLEISEKGIEAVTKLLDEGSTVAFIARYRKEATGNLTDVEIREIEKNLNKYR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +E+R++ I+ SI QGKLT++L + I +T + T LED+Y PYK KR+TR IA E GL+ Sbjct: 62 NIEKRQEEIINSIESQGKLTEELKEEILSTNTLTILEDIYAPYKSKRKTRADIAREFGLD 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L D L++ + E Y +G+ + ALD A IL E + +R Sbjct: 122 KLLDFLFTKAENEGEALDEASKYLVEGLESEEEALDRALDILAEDISNSIPARNIIRRDG 181 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 + A L ++ E+E + +Y+D + L + S + LA+ RG E L + L + Sbjct: 182 FLRAKLTCSLK---EDEAGLYENYYDFSKKLRDMKSFQTLAINRGEKEKALTVKLEFTDE 238 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 +++ + + N +S V+ ++ +L + TE+ + E AE Sbjct: 239 YNKKLIADLFRE-------DKDFNPYQESLLVKTVNDAYKRLMLPSITTEMRNFLTESAE 291 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG-- 362 DE+I+VF +NL L+ P +A +GLDPG RTG KVAVVD GK + + IYP Sbjct: 292 DESISVFGKNLKPYLLQRPIKGQAVIGLDPGFRTGCKVAVVDQFGKYLDSTVIYPVEPHK 351 Query: 363 QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + +A T+ L +K++V L+A+GN TASRETE + ++ ++ IV+EAGASV Sbjct: 352 KEKEAIATLKRLVKKYDVSLIALGNATASRETELVVNKLIQEVDGLS--YAIVNEAGASV 409 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IG+GQYQHD+ +L + Sbjct: 410 YSASTLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGIGQYQHDLDGKKLDEE 469 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L VVED VN VGV +N AS LL+ V+GL +A+ I E G+ R+ L V L Sbjct: 470 LSKVVEDAVNEVGVSINNASYKLLSYVSGLNANLAKRIEEDFKE-GKIVYRKDLKSVKGL 528 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K ++ CAGFLR LD + VHPE+Y + +++ +L ++ Sbjct: 529 GDKTYKLCAGFLRFPDSPELLDNTAVHPESYKIAKKL-------------EGEDLDSINL 575 Query: 603 SDFTD-EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + + GVPT+ DII EL+KPGRDPR + V ++DL+ GMIL+G V N+ Sbjct: 576 ESLAEKLEVGVPTLEDIISELKKPGRDPRDDNPEVLTRKEVMGIDDLKEGMILKGKVRNI 635 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 T+FGAFVDIGV DGLVH+S +SNKF+++P+ V+ +V+VKV+E+D +++RI L+M+ Sbjct: 636 TDFGAFVDIGVGIDGLVHVSKISNKFIKNPNEVLTNSQVVEVKVIEIDRKKERIGLSMK 694 >UniRef50_C2BIJ8 S1 domain RNA-binding protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=C2BIJ8_9FIRM Length = 697 Score = 652 bits (1683), Expect = 0.0, Method: Composition-based stats. Identities = 288/722 (39%), Positives = 419/722 (58%), Gaps = 29/722 (4%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 I++ E+ E+++ ++LLDEG+TV FIARYRKE+TG L D ++R +E L LR Sbjct: 2 KIIEILSKELNINEERIENVIKLLDEGSTVAFIARYRKEVTGNLTDVEIREIEKNLGRLR 61 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +E+R++ I+K I E+G+LTD+L + I A+ S T LED+Y PYK +R+TR IA E GLE Sbjct: 62 NIEKRQEEIIKLIDEKGQLTDELREEILASNSLTILEDIYAPYKSRRKTRADIARELGLE 121 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 L ++ S E A Y +G+ D K + + IL E A +R Sbjct: 122 EFLTKLLTEISSEDEALQAAVSYIKEGLEDEKDVISRSLDILAEDIANTIDARNIIRRDG 181 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 + A L++++ + EE + + Y D + L + S + LA+ R E +L + + + Sbjct: 182 FLRASLITSLKA---EEDSSYESYHDFSKKLKDLKSFQILAINRAEKEDILNVKI----E 234 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 F + +S +++ D N + ++ ++ + TEL + E A Sbjct: 235 FSDAYNKSLIYKLVSDGKNF---NPYQKELVNLTIDDAYKRLMVPSITTELRNKLTEEAS 291 Query: 305 DEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG-- 362 DE+I VF NL L+ P + MGLDPG RTG KVAVVD GK + IYP Sbjct: 292 DESIRVFGNNLKPYLLQRPLKGQVVMGLDPGFRTGCKVAVVDKNGKYLDQAVIYPVEPHK 351 Query: 363 QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASV 422 + +A T+ AL +K+ V L+A+GN TASRETE + K+ IV+EAGASV Sbjct: 352 KEKEAIATLKALIKKYGVTLIALGNATASRETELVVDKLIKEVD--GVSYAIVNEAGASV 409 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARK 482 YSAS L +EFPDLDV++RGA+S+ARRLQDP+AELVKI+PK IGVGQYQHD+ +L + Sbjct: 410 YSASSLGEEEFPDLDVTIRGAISMARRLQDPMAELVKIEPKHIGVGQYQHDLDSKKLDEE 469 Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRL 542 L VVED VN VGV +N AS LL+ V+GL + +A+ I E G+ R+ LL V L Sbjct: 470 LSKVVEDAVNEVGVAINNASYKLLSYVSGLNQNLAKRIEEDFKE-GKLVYRKDLLDVKGL 528 Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K +E AGFLR LD + VHPE+Y + ++I +L + Sbjct: 529 GKKTYELAAGFLRFPSSPEILDNTAVHPESYKIAKKI-------------QDLDLDKIDI 575 Query: 603 SDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 +E + G+PT+ DII EL+KPGRDPR + + ++DL+ GM+L+G V N+ Sbjct: 576 EKVAEELEVGIPTLKDIIAELKKPGRDPREDNPEVLTKKEIMGIDDLKVGMVLKGKVRNI 635 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 T+FGAFVDIGV DGLVH+S +S+KFV++PH + +V V+++E+D +++RI L+MR Sbjct: 636 TDFGAFVDIGVGIDGLVHVSEISDKFVKNPHDELTNSQVVSVRIIEIDKKKERIGLSMRS 695 Query: 722 DE 723 + Sbjct: 696 EN 697 >UniRef50_C1CRY7 S1 RNA binding domain protein n=174 Tax=Bacteria RepID=C1CRY7_STRZT Length = 709 Score = 652 bits (1682), Expect = 0.0, Method: Composition-based stats. Identities = 310/720 (43%), Positives = 424/720 (58%), Gaps = 23/720 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 D I+ ++ +Q+D + L EG T+PFIARYRK++TG LD+ ++ + L Sbjct: 2 DKKYEKISQDLGVTLKQIDTVLSLTAEGATIPFIARYRKDMTGSLDEVAIKAIIDLDKSL 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 L +R++A+L I EQGKLT +L +AI ++E+LYLPYK KRRT+ IA EAGL Sbjct: 62 TNLNDRKEAVLAKIQEQGKLTKELEEAILVAEKLADVEELYLPYKEKRRTKATIAREAGL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA L+ E A ++V +G A K AL GA IL+E +ED L + Sbjct: 122 FPLARLIL-QNIVDLEKEAEKFVC--EGFATGKEALTGAVDILVEALSEDVTLRSMTYQE 178 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + +++ L S +E F+ Y+D E + T+ +R LA+ RG GVL++ Sbjct: 179 VLRHSKLTSQAKDESLDEKQVFQIYYDFSETVGTMQGYRTLALNRGEKLGVLKIGFEHAT 238 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + + +++ VV + + KVL +E + + E+A Sbjct: 239 DRILAFFATRFK--------------VKNAYIDEVVQQSVKKKVLPAIERRIRTELTEKA 284 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 E+ AI +F+ NL +LL+ AP R +G DP RTG K+AVVDATGK++ T IYP Sbjct: 285 EEGAIQLFSDNLRNLLLVAPLKGRVVLGFDPAFRTGAKLAVVDATGKMLTTQVIYPVKPA 344 Query: 363 ---QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q +A +A L ++ VE++AIGNGTASRE+E F +V K FP+ VIV+E+G Sbjct: 345 SARQIEEAKKDLADLIGQYGVEIIAIGNGTASRESEAFVAEVLKDFPE--VSYVIVNESG 402 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSASELA QEFPDL V R A+SIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ +L Sbjct: 403 ASVYSASELARQEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKL 462 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 + LD VV+ VN VGV++NTAS LL+ VAGL + +++NIV +R+E G+ +R Q+ KV Sbjct: 463 SESLDFVVDTVVNQVGVNVNTASPALLSHVAGLNKTISENIVKYREEEGKITSRSQIKKV 522 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 RLG KAFEQ AGFLRI N LD + VHPE Y V+ + + S Sbjct: 523 PRLGAKAFEQAAGFLRIPESSNILDNTGVHPENYAAVKELFKCLDIKDLNEEAQSKLKSL 582 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 + G T+ DII +L KPGRD R F V + DL G LEG V Sbjct: 583 SVKEMAQELDLGPETLKDIIADLLKPGRDFRDSFDAPVLRQDVLDIKDLVVGQKLEGVVR 642 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 NV +FGAFVDIG+H+DGL+HIS +S KF++ P VV GD+V V V ++D +R+++ L++ Sbjct: 643 NVVDFGAFVDIGIHEDGLIHISHMSRKFIKHPSQVVAVGDLVSVWVKKIDTEREKVNLSL 702 >UniRef50_Q6MPA5 Putative RNA binding protein with S1 RNA-binding domain n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPA5_BDEBA Length = 780 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 323/779 (41%), Positives = 454/779 (58%), Gaps = 29/779 (3%) Query: 2 MNDSFCRIIAG-EIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 M+ + +A + A + L EG TVPFIARYRKE TG LD+ Q+R + Sbjct: 1 MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGH 60 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 E+ +R+ ++K I EQ LT ++ K I + ELE++Y P+K K++T+ IA E Sbjct: 61 ETYNEIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIARE 120 Query: 121 AGLEPLADLLWSD------PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDA 174 AGLEPLA+ +W T E+ A ++ +A + AL GA+ I++E+ A DA Sbjct: 121 AGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIATYEEALKGAQDIIVEKIANDA 180 Query: 175 ALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPS----HRALAMFRGR 230 L A V + +V+ + + +K+ Y + EP+ + HR LAM RG Sbjct: 181 ELRAMVAKNYNDSGRVVAKA-AKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGW 239 Query: 231 NEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMH 290 E L + + D + ++ + + K + VL Sbjct: 240 QEEELTVDVKGDDEAILKS---------YENFATSTPDNAIGDYLKQCARLALNVYVLPS 290 Query: 291 LETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGK 350 + E+ ++E+A+ +AI VFA N+ LL+A+P G + +G+DPGLRTG KVA++D +G Sbjct: 291 VVNEVHRQLKEKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGA 350 Query: 351 LVATDTIYPHTGQA-AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT 409 ++ +Y A KA + + ++ +E +A+GNGTA RETE F V K K Sbjct: 351 FISHTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLKKVLKDLGK-N 409 Query: 410 AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQ 469 V+VSE+GASVYSASE+A +EFPDLDV+++GA+SIARRLQDPLAELVK+DPKSIGVGQ Sbjct: 410 IPVVMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQ 469 Query: 470 YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQ 529 YQHDV+Q+QL + L+AVVE CVN VGVD+NTAS LL+ VAG+ +A+ IV R + Sbjct: 470 YQHDVNQSQLKKSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEAR-KKSL 528 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 F +R +LLKV + K FEQ AGFLRI LD++ +HPE Y V + +L D Sbjct: 529 FNDRTELLKVPKFSAKVFEQAAGFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTD 588 Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 ++G ++ + S + + G T DI+KELEKPGRDPR FK QF D + + DL Sbjct: 589 VIGEGAKKLVSQRSKWA-QLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLT 647 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 GMI G VTNVTNFGAFVDIGVHQDGLVHIS+LS+KFV+DP VV GD V VKVL+VD Sbjct: 648 EGMICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVD 707 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 + + +I+LTM++D+ P + R ER NR A++P G+ +P + A Sbjct: 708 VVKNQISLTMKMDDAPEASAPR----GERRPENRGASRPMGQGQRPPAGKPAQAPMKPA 762 >UniRef50_D1B1Y3 Tex-like protein protein-like protein n=2 Tax=delta/epsilon subdivisions RepID=D1B1Y3_SULD5 Length = 704 Score = 630 bits (1626), Expect = e-179, Method: Composition-based stats. Identities = 261/721 (36%), Positives = 409/721 (56%), Gaps = 22/721 (3%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + I+ + E + ++LL+EG+T+PFIARYRKE+T G D LR E+ +Y Sbjct: 2 NPLIPILVQKTGIAKENIINILKLLEEGSTIPFIARYRKEMTDGASDEALREFESIYAYA 61 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 ++L+ R++ +L+ I E+ LT ++ A+ +ED+Y PYK K+ +R +AI L Sbjct: 62 KKLQSRKEEVLRLIEEKATLTPEIKSAVEKAQMLQAVEDIYRPYKEKKNSRATVAIANRL 121 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLAD+L + ++ V K A+ GA+ I+ ER+++DA R Sbjct: 122 TPLADILEKAELEAEAFEKKAQSFVNEKVESVKEAISGAQDIIAERYSDDAKEREYWRVQ 181 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 L + + EG + +E ++++PSHR LAM RG E L + ++ + Sbjct: 182 LHDFSSFEIKASKTLQAEG-LYAKLAGKNERIASIPSHRYLAMMRGVAEKELHVKISYEM 240 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 + + E Y + N + ++ ++ + +E E+ ++E+A Sbjct: 241 ERVQSSIERY---------RIPSNAKSSKTYLLEAYGDGFKRLLFPSIEREIHALIKEKA 291 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 + AI F +NL LL P R +G+DP RTG K+AVVD G ++ IYP Q Sbjct: 292 DTGAIATFGKNLSQLLNTPPVTKRVILGVDPAYRTGCKLAVVDEHGTYMSHAVIYPTPPQ 351 Query: 364 AA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGAS 421 + A+ + L +K+++ VAIGNGT SRET+ F+ + ++ ++ +VSEAGAS Sbjct: 352 SDYENASRVIKELAQKYHISAVAIGNGTGSRETQEFFARLNRE-EGLSLAYTVVSEAGAS 410 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 +YSAS++A +E+P+LDV++RGA+SIA+RL+DP+A LVKIDPKS+G+GQYQHDV Q QL + Sbjct: 411 IYSASKIATEEYPNLDVTIRGAISIAQRLRDPMAALVKIDPKSLGIGQYQHDVDQKQLEK 470 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 KL V ED VN +GVD N+AS+ LL+ VAG+ +A+ IV R+ G F + +LL V Sbjct: 471 KLHEVTEDLVNRIGVDPNSASISLLSYVAGVGAKLAKAIVEHRESKGAFTCKSELLHVKG 530 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG KA+EQCAGF RI G + LD + VHPE Y + +++LA ++ + Sbjct: 531 LGAKAYEQCAGFFRIREGKSVLDNTGVHPENYAIAQKLLA--------RPDLATLSKEQI 582 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + ++ G T+ DII EL KPG DPR E F + +++L G I+ G V N+ Sbjct: 583 IALALEQGIGEATLQDIIAELLKPGFDPREELPPIAFRSDLTDISELSEGSIVSGVVRNI 642 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK-VKVLEVDLQRKRIALTMR 720 +FGAFVDIG+ DGL+HIS +S K + P V+ + ++VLEVD ++ +++L+++ Sbjct: 643 ADFGAFVDIGLKNDGLIHISQMSEKRIAHPLEVLSINQQLTRIRVLEVDKEKGKVSLSLK 702 Query: 721 L 721 Sbjct: 703 E 703 >UniRef50_C4XFG9 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=C4XFG9_MYCFE Length = 722 Score = 630 bits (1624), Expect = e-179, Method: Composition-based stats. Identities = 260/717 (36%), Positives = 405/717 (56%), Gaps = 21/717 (2%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 + +A ++ + +QV+ ++L+DEG TVPFIARYRK +TGGLD+ ++ + Y EL Sbjct: 10 KFVAQKLNLKEDQVEVVLKLMDEGATVPFIARYRKNVTGGLDEEVIQQISDMYVYNVELN 69 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLA 127 +R++AI+ + E+G LT ++ + A +K E+E++Y P+K ++T+ AI GLEPLA Sbjct: 70 KRKEAIIDILKEKGLLTPEIENKLKAAETKAEVENIYEPFKVGKKTKASEAIALGLEPLA 129 Query: 128 DLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKN 187 + + + Y + V + A++ A+YI+ + ++D V+ ++ Sbjct: 130 KAIMEATDESFDPYKEAKKYLNDKVPTVEFAIEQAQYIISQIMSQDVENREYVKKQIYDF 189 Query: 188 AHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDE 247 +V+ V E+E F+ Y+D+ E + +P+HR LA+ RG ++ +L + + Sbjct: 190 GFIVTKVKKNAEDEKEVFQQYYDYKERIKFIPNHRVLAISRGEDKKILSYDMTYN----- 244 Query: 248 PPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEA 307 +I D + + +L + E+ + RAE EA Sbjct: 245 ------LAKITYDLNNKYFKIKRTGKILNESLKDSLDRLILPSIIREIKSDLFARAEKEA 298 Query: 308 INVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQA--A 365 IN+FA NL +L+ + M +DP G K+A++D GK + IYP+ Q Sbjct: 299 INLFATNLETMLLWPAVKNKTVMAIDPAFVNGCKIAILDPQGKFLKKALIYPNPPQNYVD 358 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ----FPKVTAQKVIVSEAGAS 421 KA V L + + V ++ IGNGTASRETE F ++ K+ P +VSE GAS Sbjct: 359 KAKEIVNKLLDSYKVNIIVIGNGTASRETEEFIANLLKERSKVNPNEDISYAVVSEVGAS 418 Query: 422 VYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLAR 481 VYSAS++A EFPD V R AV+I RR QDPL ELVKIDPK+IGVGQYQHDV+Q L++ Sbjct: 419 VYSASKVAIDEFPDFSVEERSAVNIGRRFQDPLNELVKIDPKAIGVGQYQHDVNQKDLSK 478 Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 LD V+ VN VGVDLN+A+ +L ++GLT+ +AQNI+ +R++ +F+ R++LLKV Sbjct: 479 ALDFKVDKVVNMVGVDLNSATKEILCYISGLTKTLAQNIIDYREKINKFKERKELLKVKG 538 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 LG KA+EQ GFLRI+ N D + +HPE+YP+ I+ A Q L D+ + E ++ Sbjct: 539 LGEKAYEQAVGFLRIHDSKNFYDRTAIHPESYPLAINIVNALQLDLNDIDLKTIEQQDAN 598 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 D V I+ L P +D R + V + DL+PGMIL+G+V N+ Sbjct: 599 -KLAKDFNSNEYDVKLILDSLSNPTKDIRDDKDGYILKKDVLKLEDLKPGMILDGSVQNI 657 Query: 662 TNFGAFVDIGVHQDGLVHISSL---SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 T+FG FV IG+ Q L+HIS++ + +++ VVK GD +K+++LE+D +R+RI Sbjct: 658 TDFGIFVYIGIKQAALIHISNMKRNKDHYIKHSSEVVKTGDNIKIQILEIDKERERI 714 >UniRef50_Q8N5C6 S1 RNA-binding domain-containing protein 1 n=19 Tax=Chordata RepID=SRBD1_HUMAN Length = 995 Score = 626 bits (1615), Expect = e-178, Method: Composition-based stats. Identities = 264/790 (33%), Positives = 392/790 (49%), Gaps = 80/790 (10%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN ++++ P +RL ++ NT+PFI RYRKE+ LD LR ++ L Sbjct: 210 MNWDMVQVLSERTNIEPWVCANIIRLFNDDNTIPFIIRYRKELINNLDADSLREVQQTLE 269 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIE 120 LR + ++ + ++ I ++GK+++ L KA+ + ELE + PYK + T+ Q A + Sbjct: 270 ELRAVAKKVHSTIQKIKKEGKMSECLLKAMLNCKTFEELEHVSAPYKTGSKGTKAQRARQ 329 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAK 179 GLE A L P E++ Y+ D KG++ + G ++IL + A+D L Sbjct: 330 LGLEGAARALLEKPG---ELSLLSYIRPDVKGLSTLQDIEIGVQHILADMIAKDKDTLDF 386 Query: 180 VRDYLWKNAHL------VSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 +R+ K + E++ KF Y + + H+ LA+ RG N Sbjct: 387 IRNLCQKRHVCIQSSLAKVSSKKVNEKDVDKFLLYQHFSCNIRNIHHHQILAINRGENLK 446 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLR-LNNAPADSWRKGVVSWTWRIKVLMHLE 292 VL + +N K+ +C I + R ++ +++ + L Sbjct: 447 VLTVKVNISD----GVKDEFCRWCIQNRWRPRSFARPELMKILYNSLNDSFKRLIYPLLC 502 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLV 352 E + AE E++ +F RNL LL+ +P R MG+DPG + G K+A++ T +++ Sbjct: 503 REFRAKLTSDAEKESVMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLAIISPTSQIL 562 Query: 353 ATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ--KQFPKVTA 410 TD +Y H GQ + A + L N V IGNGTA RETE ++ D+ F + Sbjct: 563 HTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVIGNGTACRETEAYFADLIMKNYFAPLDV 622 Query: 411 QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY 470 IVSEAGAS+YS S A +E P LD +LR AVSIARR+QDPLAELVKI+PK IGVG Y Sbjct: 623 VYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRVQDPLAELVKIEPKHIGVGMY 682 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 QHDVSQT L LD+VVE+CV+ VGVD+N S LL +AGL A+NI+ WR++NG F Sbjct: 683 QHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIAGLNANRAKNIIEWREKNGPF 742 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGD------------------------------ 560 NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 743 INREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSQQTETSGQIQGVAVTSSADVEVTN 802 Query: 561 ------------------NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 NPLD + +HPE+Y + R L++ L +G + + + Sbjct: 803 EKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDIAMRFLSSIGGTL-YEVGKPEMQQKINS 861 Query: 603 SDFTD--------EKFGVPTVTDIIKELEKPGR-DPRPEFKTAQFADGVETMNDLQPGMI 653 + + V T+ II L +P D R +F F + + DLQ G + Sbjct: 862 FLEKEGMEKIAERLQTTVHTLQVIIDGLSQPESFDFRTDFDKPDFKRSIVCLEDLQIGTV 921 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV----VKAGDIVKVKVLEVD 709 L G V N T FG FVDIGV + GL+ I +++ + + G+ V+V+VL +D Sbjct: 922 LTGKVENATLFGIFVDIGVGKSGLIPIRNVTEAKLSKTKKRRSLGLGPGERVEVQVLNID 981 Query: 710 LQRKRIALTM 719 + R RI L + Sbjct: 982 IPRSRITLDL 991 >UniRef50_B3PNC1 Transcription accessory protein Tex n=2 Tax=Mycoplasma RepID=B3PNC1_MYCA5 Length = 717 Score = 625 bits (1612), Expect = e-177, Method: Composition-based stats. Identities = 240/723 (33%), Positives = 405/723 (56%), Gaps = 22/723 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN S +A ++ +QV+ ++LL EG T+PFI+RYRK +TGGLD+ + + Sbjct: 1 MNISVLN-VAKKLALEEKQVEETLKLLAEGATIPFISRYRKNVTGGLDEEAIAQINDFYQ 59 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y EL +R++ +++ + E+G LTD+L K I +K +E++Y P+K ++T+ AI Sbjct: 60 YDVELLKRKEYVIEILKEKGLLTDELNKKILEASTKQAVENIYEPFKIGKKTKATEAIAL 119 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA + + + V Y + + +T+A + +YI+ + ++D ++ Sbjct: 120 GLEPLAKTIMQNRDESFNVFKEAAKYISEKLPNTEAVIGQTKYIIAQIISQDIEARENIK 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 +++ + + + ++ F Y++ E +S +P+HR LA+ R ++ ++ + + Sbjct: 180 KEIYQYGWIKTALKKDAQDPKQVFLQYYEFGEKISKIPNHRILAISRAEDKKIISYTFDY 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 ++++ D N +L ++ E+ + E Sbjct: 240 S-----------VKKLVYDLSNRYFVNKRTAFITNDCARDALERLILPSIDREIKSELFE 288 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RA+ EAI +FA N+ +L+A + + +DP G K+AV+D G + I+P+ Sbjct: 289 RAQAEAIKIFANNVEQMLLAPATKNKKILAIDPAYVHGCKLAVLDENGNFLEKGLIFPNE 348 Query: 362 GQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK----QFPKVTAQKVIV 415 ++ A + V L +K++++L+ IGNGTASRETE+F ++ + Q P + +V Sbjct: 349 PRSEIKNATLRVNGLLDKYSIDLIVIGNGTASRETEQFISNLLQNRKVQHPNENIRFAVV 408 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 SE GASVYSAS++A +EFP+L V R A++I RR QDPL EL+KI+PKSIGVGQYQHDV+ Sbjct: 409 SEIGASVYSASKIAQEEFPNLSVEERSAINIGRRFQDPLNELIKIEPKSIGVGQYQHDVN 468 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 Q +L +LD V VN VGVDLN+A+ +L+ ++GL+ +A+NIV R +NG F+NR++ Sbjct: 469 QKELTSELDFKVNKVVNMVGVDLNSATKIILSHISGLSNTIAKNIVEHRLKNGNFKNREE 528 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 L V LGPKA+EQ GFLRI+ N D + +HP+ Y + ++LAA +++L N Sbjct: 529 LKNVKGLGPKAYEQSVGFLRIHDSTNFYDKTNIHPDQYELANKVLAALNLNVENLDKNIL 588 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILE 655 N K + ++ I+ L PG+D R + +D + T++DL+ G Sbjct: 589 MEAN-KEKLAKELNTNEYDISLILDSLISPGKDIRDDKDGFILSDKLLTVDDLEIGKRYT 647 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNK---FVEDPHTVVKAGDIVKVKVLEVDLQR 712 G V NVT+FGAF +G+ Q LVHIS++ F++ P ++ G+ ++++ +D +R Sbjct: 648 GQVINVTDFGAFFFLGIKQSALVHISNMKKDDESFIKHPSEILNVGENWTIEIISIDKER 707 Query: 713 KRI 715 +RI Sbjct: 708 ERI 710 >UniRef50_B5ZAK2 Protein tex n=15 Tax=Ureaplasma RepID=B5ZAK2_UREU1 Length = 706 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 242/722 (33%), Positives = 405/722 (56%), Gaps = 20/722 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M D + + +++ + + + LL + NT+ FIARYRK +T +D+ Q++ + Sbjct: 1 MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YL +L +R++AI+K++ ++G LTDDL ++IN +LE+LY PY ++T+ +AIE Sbjct: 61 YLTKLNKRKEAIIKNLEQKGLLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA L+ + + + Y ++ V A+ GA I+ ++ A DA L + Sbjct: 121 GLEPLALLILKNNPNC-NIKEVAKQYLNEQVLSVDEAIAGACDIIAQKVANDATLRQMLY 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + K+A L++ + + F Y++ P+ + +++ +A+ R ++ L+ Sbjct: 180 ETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDF 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 +F + R N + + + K V+ + ++ + + + Sbjct: 240 KKEFLIDFAINKY---------TRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLD 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 A ++ +F+ NL LL+ P +G DPG G K+AVVD +L+ TD IYPH Sbjct: 291 EAHQQSAQIFSDNLQQLLLQKPLKDHIVLGFDPGYAHGCKLAVVDKNNQLLHTDIIYPHK 350 Query: 362 GQA--AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q +A T+ +L K+ + +AIGNGTAS E+ F D+ K+F + ++SE G Sbjct: 351 PQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEFK-LNINYCVISEDG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 AS+YSAS +A++EFP+L V R A+SIARR+ DPL EL+KIDPKSIGVGQYQHD+++ L Sbjct: 410 ASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNIL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 +K+D ++ CVN VGVD+NTAS+PLL++V+GL + A+ I + E+ ++R+QL + Sbjct: 470 EQKVDFCIDYCVNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTI 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 + K FEQ AGFLRIN+ N LD +++HPE+Y +V ++ + + DL+ N L Sbjct: 530 PYVTDKVFEQAAGFLRINNSLNFLDKTSIHPESYAIVNQLCEYIKLPINDLINNHQVLNQ 589 Query: 600 LKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 L +D T+ K V T+ +II L+ P +D R ++ + +NDL+ GM+++G + Sbjct: 590 LNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLKVGMLVQGTI 649 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 N T FG+FVDIG+ D L+HIS S + + + ++D ++I+L Sbjct: 650 RNQTQFGSFVDIGLKNDALLHISHYSE------QDNLHVNKNINAYIDKIDTIAQKISLK 703 Query: 719 MR 720 +R Sbjct: 704 LR 705 >UniRef50_A8EWB1 S1 RNA binding domain protein n=4 Tax=Epsilonproteobacteria RepID=A8EWB1_ARCB4 Length = 702 Score = 622 bits (1605), Expect = e-176, Method: Composition-based stats. Identities = 261/723 (36%), Positives = 411/723 (56%), Gaps = 26/723 (3%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ I+ + + + ++LLDEG T+PFIARYRK+ T G D QLR E Sbjct: 1 MNNHLIEILKEKTNFSSKVISNIIKLLDEGCTIPFIARYRKDFTDGATDEQLRIFEEVYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y ++L R++ I+ + E+ L + + K + + + ED+Y P+K K+ +R AIE Sbjct: 61 YSKKLLVRKEEIIALLKEKNFLDEKVLKNLESATTLQACEDIYAPFKEKKSSRTTAAIEN 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+++ S E+ + ++ + A++GA+ I+ +R+A+D +R Sbjct: 121 GLEPLANIIQSMKYSLEEINQKAKQFLNQNITTIDEAINGAKDIIAQRYADDFKSKEVLR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + L + ++ + + D +E + + SHR LA+ RG NE L + + Sbjct: 181 NLIANWGTLEIKAT-KELDKNGLYASFVDSNEKIKYIKSHRVLAILRGVNEKQLSIKVEI 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 D + Y + +N + + +L L+ E + ++E Sbjct: 240 DENHILENIKKY---------KIPINAESSKELVFDAYKDGLKRLLLPSLKREAITALKE 290 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 +A EAI +F +NL +LL+ AP + +G+DPG +TG K+AV+D G + + IYP Sbjct: 291 KASSEAIELFGKNLKELLLTAPLVNQMILGMDPGYKTGCKLAVIDENGLYLDSAVIYPTK 350 Query: 362 GQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 + ++ V L +K+ + +AIGNGTASRET F ++ KQ + IVSE G Sbjct: 351 PKEDIVSSSKVVLDLIKKYKITTIAIGNGTASRETANFINELIKQ-NNLDVNYAIVSEIG 409 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSAS++A +E+P+LDV++RGA+SIA RL+DP+A LVKIDPKS+G+GQYQHDV+Q +L Sbjct: 410 ASVYSASKIAIEEYPNLDVTIRGAISIASRLRDPMAALVKIDPKSLGIGQYQHDVNQKEL 469 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 A KL+ + D VN VGVDLN+AS LL+ ++G+T +A+NIV R++ +F + +LLKV Sbjct: 470 ALKLENITIDLVNKVGVDLNSASYKLLSFISGITEKLAKNIVEHRNKIKKFNTKNELLKV 529 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +G KA+EQC GFLRI G + LD + +HPE Y V ++ N Sbjct: 530 KGIGEKAYEQCVGFLRIKDGLSILDNTAIHPEDYEVTAKLQ-----------KNYKVEEI 578 Query: 600 LKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 ++E + + DI+ EL KPG D R EF +FA+ + +NDL+ G IL G V Sbjct: 579 KDFEKVSNEINTSLLKLKDIVTELLKPGYDVRTEFNQVKFANDILDINDLKEGYILSGIV 638 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK-VKVLEVDLQRKRIAL 717 N+T+FGAFVDIG+ D L+HIS +S K + V+ ++ +KV+ VDL+++R+ L Sbjct: 639 RNITDFGAFVDIGLKNDALLHISQISEKRISHASDVLSINQNLENLKVISVDLEKQRVGL 698 Query: 718 TMR 720 +++ Sbjct: 699 SLK 701 >UniRef50_UPI0000D57194 PREDICTED: similar to S1 RNA binding domain protein, putative n=1 Tax=Tribolium castaneum RepID=UPI0000D57194 Length = 753 Score = 620 bits (1598), Expect = e-176, Method: Composition-based stats. Identities = 257/736 (34%), Positives = 398/736 (54%), Gaps = 38/736 (5%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 S ++A ++ V+L ++GNTVPFIARYR+++T LD QLR ++ Sbjct: 28 QWSDHELVAEQLGLGLNVAKNVVKLFEDGNTVPFIARYRRDVTNNLDAEQLRAVKDTCEE 87 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEA 121 + L + ++LK + + G L + L +++ + S ELE +Y PYK +RT + A E Sbjct: 88 ISALRGKIGSVLKQLDKSGVLNEQLRRSVVNSRSIEELEYIYAPYKSGSKRTLAERAKEQ 147 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLE A L ++ V +V D G+ D KA +G +I+ + D+ +L+ +R Sbjct: 148 GLEAPALALLNNTKR---VRFDDFVKIDDGL-DIKAVKNGIAHIIAAVISTDSEILSSLR 203 Query: 182 DYLWKNAHLVSTVVSGKE---EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 ++ K ++ T + + E KF +YFD PL + H+ LA+ RG N +L + Sbjct: 204 EFRKKANIIIKTKKAATKHKVENSEKFDNYFDFEVPLKYIKPHQVLAINRGENLKILSVK 263 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + ++ D + K + +++ V ++ E+ Sbjct: 264 VVLPDSLFNEFRK------KCDKWTSLRGDRVRQDVVKRAIEDSYQRLVKPLIKREIRAE 317 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 +++ AE + VF+ NL DLL+A P + +GLDPG G K+A++ G L+ + IY Sbjct: 318 LKQNAERASCQVFSSNLKDLLLAPPLRGQTILGLDPGFTNGCKLALISPLGDLIDQNIIY 377 Query: 359 PHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVS 416 PH + + + ++N EL+A+GNGTA R+TE + D+ K F + + +V Sbjct: 378 PHKRKNNDDVTIIRDMLLENNCELIALGNGTACRQTEEWLSDLIKSQVFSPLDVKYTVVR 437 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQ 476 E GAS+YS S A +EFP +D ++ AVS+ARRLQDPLAELVKI+PK +GVG YQHD+ + Sbjct: 438 EEGASIYSCSPEAKKEFPTIDPNIISAVSLARRLQDPLAELVKIEPKHLGVGMYQHDIKK 497 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL 536 QL L+ VV +CV+ VGVDLNTAS LL VAGL+ AQ I+ +R ENG F +RQQL Sbjct: 498 RQLEEALNDVVSECVSFVGVDLNTASRCLLRHVAGLSDKKAQQIIDYRAENGPFISRQQL 557 Query: 537 LKVSRLGPKAFEQCAGFLRIN------HGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 LKVS +G K F QCAGF+R+ N LD++ +HPE+Y + ++L L D+ Sbjct: 558 LKVSGIGQKIFTQCAGFVRVVPPSGETMKYNKLDSTNIHPESYEMATKLLKMFNLRLCDI 617 Query: 591 MGN------SSELRNLKASDFTD-EKFGVPTVTDIIKELEKPGR-DPRPEF-KTAQFADG 641 E+ L S + T+ I+ +P D R ++ K F G Sbjct: 618 GTTGFITIAKREVPKLDLSKLSQMFGSNEQTLRLILDAFCQPLNYDLRSDYDKKPVFKKG 677 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 + ++DL+ G++L G VTNVT+FG+FVDIGV +GL+H+S + + G+ V Sbjct: 678 LIEISDLKSGIVLTGVVTNVTHFGSFVDIGVGINGLIHVS-------KSNGLDLHLGNKV 730 Query: 702 KVKVLEVDLQRKRIAL 717 +VKVL +D+++KRI L Sbjct: 731 EVKVLSIDVEKKRIGL 746 >UniRef50_Q4A5L5 Putative uncharacterized protein n=2 Tax=Mycoplasma synoviae 53 RepID=Q4A5L5_MYCS5 Length = 705 Score = 618 bits (1593), Expect = e-175, Method: Composition-based stats. Identities = 227/717 (31%), Positives = 395/717 (55%), Gaps = 18/717 (2%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M I+A E+ QV+ + EG TVPFIARYR+ T L++ Q+ +++ Sbjct: 1 MESKNYEIVAKELNITVSQVETVLNYFKEGATVPFIARYRQSQTNNLNEEQIYAIQSLYL 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y EL +R++ I++ + E L +DL + IN+ K+ELE +Y PYK + T+ ++AIE Sbjct: 61 YASELSKRKEKIIEKLKELNLLNNDLEQKINSCTKKSELESIYEPYKSGKITKAKMAIEL 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GL PLA +W++ + ++ + + + YIL ++ +ED L K++ Sbjct: 121 GLMPLALKIWNNKNSRFDLNFEARKFLSDKLKTLDEVILNVNYILSQKISEDFDLREKLK 180 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + L+ +++E +F++Y+ + P+ V +H +A+ RG N ++ + Sbjct: 181 ENILAYGKLICKKT-KEQDENDRFKNYYQYSTPIKYVKNHNIMAINRGSNLKKIKWDVYL 239 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 + + E + + ++ K V+ + +L L+ ++ + + Sbjct: 240 NFEILERISLRKITKFKFN-----------EALLKDAVNDALKRLILPSLKNKIFSDLFD 288 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 AE ++I +F+ N+ LL A + +DPG +G K+A + G ++ TIYP+ Sbjct: 289 EAEKKSIEIFSNNVETLLSAPAVSGHNILAIDPGYVSGCKLAALSEKGSVLEIATIYPNE 348 Query: 362 GQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 ++ +A V L +KHN+ ++ IGNGTASRETE+F ++ ++ IVSEAG Sbjct: 349 PRSNVSQAKTKVLELIKKHNITIIVIGNGTASRETEQFINNLIQENNLDNIYFCIVSEAG 408 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQL 479 ASVYSASE+A +EFP+L V R A++I R+ DPL ELVKIDPKSIGVGQYQHDV+Q +L Sbjct: 409 ASVYSASEIAIEEFPNLSVEKRSAINIGRKFLDPLNELVKIDPKSIGVGQYQHDVNQKEL 468 Query: 480 ARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKV 539 L+ V+ VN GVDLN+AS +L+ ++GL + +QNI+ +R++N F++R ++LKV Sbjct: 469 QNYLNFKVQKVVNNYGVDLNSASREILSYISGLDKKTSQNIINYRNKNKSFKSRDEVLKV 528 Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +GPK FEQ GFLR+ + N LD + +HPE+Y + +I++ + + + EL Sbjct: 529 DGIGPKTFEQSIGFLRVFNSSNFLDKTAIHPESYSLANKIISEYKLIPSEEGIKNLELNA 588 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 + S+ + + I+ L+ P + R + + + +L+ G I++ + Sbjct: 589 KELSEK--YSSSIEEINLILSSLKNPTKIIRSSKQGYLLKKNLINLENLKIGDIVDATID 646 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 N+T+FG F IG+ + VHIS+L+ K + + +++KV++ E++ + K+I+ Sbjct: 647 NITDFGLFCYIGLKESLFVHISNLAKK--GNIYESYNLNNLIKVEITEINKENKKIS 701 >UniRef50_D2NPD4 Transcriptional accessory protein n=2 Tax=Rothia mucilaginosa RepID=D2NPD4_9MICC Length = 854 Score = 614 bits (1583), Expect = e-174, Method: Composition-based stats. Identities = 343/802 (42%), Positives = 466/802 (58%), Gaps = 80/802 (9%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + +A E P ++ AAV LLD N+VPFIARYRKE TG L DTQLR +++RL L Sbjct: 53 EHLINALAVETGIAPHRIRAAVALLDADNSVPFIARYRKEATGALTDTQLRTIQSRLGQL 112 Query: 64 RELEERRQAILKSISE---QGKLTD----DLAKAINATLSKTELEDLYLPYKPKRRTRGQ 116 R LEERR +L++++E +G + L ++ + ++ +Y PY+ +R TR Sbjct: 113 RALEERRNRVLEALTERADEGLIDPLTLLQLRSSLMNAATIADVNAIYAPYRSERVTRAH 172 Query: 117 IAIEAGLEPLADLLWSDPSHTPEVAAAQYV--------------------YADKGVADTK 156 +A AGL+ L + L P AA Y+ + + Sbjct: 173 LARAAGLDSLVEDLLEVPLAEAHAIAAAYITDGTEDDEDDEDEGIEAAEADEALQIHSAE 232 Query: 157 AALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLS 216 ALDGAR IL++R D L K+ L ++ + S V++G+E GAKF DYF + + Sbjct: 233 EALDGARAILIDRALTDPVLSEKLLKRLRESGVIESRVIAGQESTGAKFSDYFAFSDRIR 292 Query: 217 TVPSHRALAMFRGRNEGVLQLSLNADPQ--------------------FDEPPKESYCEQ 256 ++P HR LA+ R ++ GV++L ++ P E + +Y + Sbjct: 293 SIPPHRVLALHRAKDAGVVRLKVDVAPAPVALSRLRGAARAEAEAAAENYENVRSAYERE 352 Query: 257 IIMD-HLGLRLNNAPADS-----WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINV 310 + + +++ N D W V WR + L + + + A A V Sbjct: 353 VAAALRIPVQVLNTVDDEDRVLGWLAATVRTAWRSHLRPRLAERIRHQLLDAAAQHATEV 412 Query: 311 FARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ--AAKAA 368 FA NL D+L+AAPAG + T+GLDPGLR GVK AVVD TG+ + T+YPH + A+A Sbjct: 413 FASNLRDILLAAPAGHKTTLGLDPGLRHGVKYAVVDGTGEPLRVGTVYPHAPRNQWAEAL 472 Query: 369 MTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA---QKVIVSEAGASVYSA 425 +A C +H VEL+AIGNGTASRET++ ++ + + QKV VSEAGASVYSA Sbjct: 473 RELAVACREHGVELIAIGNGTASRETDKLASELIRTLREEGVDAPQKVTVSEAGASVYSA 532 Query: 426 SELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDA 485 S LAA E PD DV++RGAVSIARRLQDPLAELVKIDP+SIGVGQYQHDV L R L+ Sbjct: 533 SALAAAELPDYDVTVRGAVSIARRLQDPLAELVKIDPQSIGVGQYQHDVPPAALRRALND 592 Query: 486 VVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 VEDCVNAVGV+LN+ASV LL VAG+ A+ I+A+R E+G F NRQQLL V RLG K Sbjct: 593 TVEDCVNAVGVNLNSASVQLLAHVAGVGTATAERIIAYRTEHGLFTNRQQLLNVPRLGAK 652 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL--------MGNSSEL 597 F Q AGF+RI G+ PLDAS VHPEAYP+ RI+A Q S L Sbjct: 653 TFRQAAGFIRIRGGEEPLDASAVHPEAYPLARRIIADAQARNGAHWVAGALGTSDGSDPL 712 Query: 598 RNLKASDFT--------------DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 L +D+ + GV TV DI EL +PG DPR F+TA+F++ V Sbjct: 713 AGLNPADYVQGSDTQVDAQMSADEAAAGVYTVEDIFTELRRPGLDPRGSFRTARFSESVS 772 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 D++PGM+LEG V+NV FGAFVDIGVHQDGLVHIS +S +V +PH +V++GDIV+V Sbjct: 773 HFGDVRPGMVLEGTVSNVAAFGAFVDIGVHQDGLVHISQMSRGYVANPHDIVRSGDIVRV 832 Query: 704 KVLEVDLQRKRIALTMRLDEQP 725 +V+EVD R+RI+L++ ++++ Sbjct: 833 RVVEVDPARRRISLSLLVEDEN 854 >UniRef50_UPI0000586461 PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000586461 Length = 783 Score = 603 bits (1554), Expect = e-170, Method: Composition-based stats. Identities = 239/730 (32%), Positives = 370/730 (50%), Gaps = 34/730 (4%) Query: 16 ARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILK 75 +P V+ V+LL+E TVPFIARYRKE TG ++ +R +++ L L+ ++E+ ++ L Sbjct: 60 VQPRIVENVVKLLEEECTVPFIARYRKEQTGNMEAAVIREIKSSLEELKVVQEKTKSHLG 119 Query: 76 SISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEAGLEPLADLLWSDP 134 + ++ KLT +L ++ + S ELE L+ P+K + T + A GLEP A+ L + Sbjct: 120 KLGKEKKLTKELRESFCNSHSMIELEQLFAPFKAGSKTTLAERARRTGLEPAAEKLLGET 179 Query: 135 SHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKVRDYLW-------- 185 + + + +++ D +G G ++I+ E ++D + +R + Sbjct: 180 AGLFNIQS--FIHPDTEGCRTAAEVEKGVQHIIAEVVSKDKTTVDYLRSCVKDMKDQIFL 237 Query: 186 ---KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 K ++ + KF+ YFD ++T+ H+ LA+ RG L + + Sbjct: 238 SVSKAGQARKKTKKEQQVDYEKFQTYFDGKFSINTIKPHQVLAINRGEEFKALTVKVTLP 297 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + + + N+ + V + + + E+ T+ + Sbjct: 298 DR----LTKQFINWCKAKWCSHTQPNSYSSKIMCMAVDDAYNRLMSPMILREIRSTLNKT 353 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG 362 AE +I VF +NLH LL+ P R +G+DPG + G K+A++ ATG+++ T HTG Sbjct: 354 AEKASIEVFTQNLHRLLLTPPVKGRVILGVDPGFKNGCKLAMISATGEILTTSVSLMHTG 413 Query: 363 QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVSEAGA 420 + L + E + IGNGTA R+TE F+ +V K + Q IV+E GA Sbjct: 414 NKYYERNKMIDLIQTFKCETIGIGNGTACRQTEEFFSEVIKSGSLQPLHVQYCIVNEDGA 473 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 S+YS S A +E P+LD ++R AVSIARRLQDPLAELVKIDPK IGVG YQHDV + L Sbjct: 474 SIYSVSPEAEKEMPNLDPNIRSAVSIARRLQDPLAELVKIDPKHIGVGMYQHDVPERLLK 533 Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVS 540 L VVE+ V+ VGVDLN S LL V+G++ +A+ I++ R G F NRQ LL V Sbjct: 534 AALGDVVEESVSFVGVDLNICSEVLLKWVSGISACLAKKIISHRQRFGAFINRQMLLDVK 593 Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 LGPK F+QCAGF+RIN + ++ E + R+L + +D+ S + Sbjct: 594 GLGPKTFKQCAGFVRINPTGGAEETNS--DEVIVISTRLLKMAFASGRDIGSESIRGKLD 651 Query: 601 KASDFTDE-------KFGVPTVTDIIKELEKPGR-DPRPEFKTAQFADGVETMNDLQPGM 652 G PT+ II L++P D R EF F + +++ + PGM Sbjct: 652 NLIKSRGNASLAGSIGVGEPTLDLIINGLKQPTNYDIRVEFDKPLFKQNIMSIDQIIPGM 711 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD-LQ 711 L G VTN +FG FVDIGV GL H S + + ++ V+ GD V+V V+ Sbjct: 712 QLTGRVTNAVHFGVFVDIGVKDKGLCHRSHMLHHILK--GKVLGPGDKVEVVVISKKLTD 769 Query: 712 RKRIALTMRL 721 + ++RL Sbjct: 770 SGKWNFSLRL 779 >UniRef50_Q17DE1 S1 RNA binding domain protein, putative n=2 Tax=Culicini RepID=Q17DE1_AEDAE Length = 968 Score = 596 bits (1537), Expect = e-168, Method: Composition-based stats. Identities = 251/764 (32%), Positives = 401/764 (52%), Gaps = 61/764 (7%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSY 62 ++A ++L +E NT+PFI RYRKE+ G + LR+++ + Sbjct: 215 QWDDYELLAEMQNIDRRTARTIIKLFEEENTIPFICRYRKELIGDMTPDDLRDVKLAYNQ 274 Query: 63 LRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEA 121 + ++ + I+K++ ++ KLT+D+ + + S EL+ +Y P+KP + + A Sbjct: 275 ILSIKSKADTIIKNLEKEEKLTEDIKQDLLCAKSIDELDHMYAPFKPANKGSLADRAKAL 334 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+ A+ + PE+ + V + +G+ + +G ++++ F+++ A+L ++ Sbjct: 335 GLDSFAEGILIG--SLPEIDLPELVKPEVEGLETVEKVEEGIKHLMAHNFSKNTAVLEEI 392 Query: 181 RDYLWKNAHLVSTV---VSGKEEEGA----------------------KFRDYFDHHEPL 215 R + K ++S+ S K EE KF YF Sbjct: 393 RRLISKYDIVLSSTQITKSRKAEEKDESNNNGKGAGGMKRIPKKVDEHKFEHYFSFTCCT 452 Query: 216 STVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWR 275 + H+ +A+ RG N+ VL + L QF + K + ++L + Sbjct: 453 KYLRPHQIMALNRGENQKVLSIKL----QFKDNVKGDLYWFLKKEYLQEGTASRKRTELF 508 Query: 276 KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPG 335 + + K++ + + + +RAE ++ VFA NL LL+ AP +G+DPG Sbjct: 509 EASFDEAFTKKLVPLMSRTVRSELTKRAEKASVEVFANNLKQLLLTAPVKGEKILGIDPG 568 Query: 336 LRTGVKVAVVDATGKLVATDTIYPHTG--QAAKAAMTVAALCEKHNVELVAIGNGTASRE 393 G K+A++ G L+ T TIYPH G ++ A +A + KH+ L+A+GNGTA RE Sbjct: 569 FSNGCKLALISECGDLLDTATIYPHIGGERSKVAPGILANMMRKHSCALIALGNGTACRE 628 Query: 394 TERFYLDVQKQ--FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQ 451 TE + ++ K + IV E GAS+YS SE+A +EFP +DV+L AVSIARRLQ Sbjct: 629 TESMLSYMMEEGILDKRFVRYSIVPEQGASIYSCSEVAKKEFPKMDVNLISAVSIARRLQ 688 Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DPL E VKI+PK +GVG YQHD+++ L+ LD VV +CV+ VGVD+NTASV LL+ V+G Sbjct: 689 DPLCEYVKIEPKHLGVGMYQHDINEKSLSETLDEVVMECVSFVGVDINTASVSLLSHVSG 748 Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI------NHGDNPLDA 565 LT A++IV+ R +NG F++R+QLLKV +G K F QCAGF+RI N LD+ Sbjct: 749 LTAKRAEHIVSHRTKNGPFRSREQLLKVKFIGDKTFTQCAGFIRIEPLTAGIRDYNLLDS 808 Query: 566 STVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP-----TVTDIIK 620 + VHPE+Y + E I+ + KD +G + ++ + K +P T+ I Sbjct: 809 TWVHPESYALAESIITKAGLSNKD-IGRVDFILGIRDFAYRTPKSALPGMFNQTIERIEC 867 Query: 621 ELEKPGRDPRPEFKT-----AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 L R+ +++ F G+ +M+DL G +L GAV NVT+FGAFVDIGV + Sbjct: 868 VLSALQRELLRDYRADINKPPMFKKGLTSMSDLAEGTVLTGAVNNVTDFGAFVDIGVENN 927 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 GL+H S ++ V GD V+V VL +D+ + R+ L + Sbjct: 928 GLIHRSKMNGMRV-------NIGDQVEVTVLSIDVGKGRLGLKL 964 >UniRef50_UPI000180C576 PREDICTED: similar to S1 RNA-binding domain-containing protein 1 n=1 Tax=Ciona intestinalis RepID=UPI000180C576 Length = 795 Score = 581 bits (1497), Expect = e-164, Method: Composition-based stats. Identities = 244/789 (30%), Positives = 383/789 (48%), Gaps = 83/789 (10%) Query: 3 NDSFCRIIAGEIQARPEQVDAAVRLLD-EGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 +++ + + +++++ + T+PFI+RYRKE+T G+D LR L Sbjct: 7 KWDIAHLLSERLNVDKNTANNIIQMIEVQECTIPFISRYRKEVTHGMDPNTLRMFLDTLK 66 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 LR+++++ ++ + +Q L + +++NA + E+ L PYK ++T A Sbjct: 67 ELRDVQKKATTAIRQVQKQEPLDHAVVESLNAAETVEEINVLLAPYKVDKKTLACRARTL 126 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKV 180 GL+ A + ++P + ++V D +G A+ K G ++I+ E A D L ++ Sbjct: 127 GLDNAAKAILNNPRQL--INLNEWVKKDCEGRANLKEVKTGVKHIICEAIARDKTTLERI 184 Query: 181 RDYLWKNAHLVSTVVSGKEEEGA----------------KFRDYFDHHEPLSTVPSHRAL 224 + YL + +S +++ KF Y +S + S++ L Sbjct: 185 KRYLKPTCLTLEAKMSASKKKAMDAEKEKGGHSTSQNTSKFECYHHFQHNVSALRSYQVL 244 Query: 225 AMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWR 284 A+ RG L + ++ + E +C + K V+ + Sbjct: 245 AINRGEALKELTVKIHIS-ERAENNFIDWCNY----KWAEEHKYEDMKTLLKECVTEAYT 299 Query: 285 IKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAV 344 + + + + + A+ ++++VF RNL LL+ +P + +G+DPG + G K AV Sbjct: 300 RLLKPQVLRKTRSELTKTAQMDSVHVFGRNLKKLLLTSPVRGKIILGIDPGYKNGCKCAV 359 Query: 345 VDATG-KLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK 403 V + G +++A D Y H A A + L K N++L+ IGNGTA RETE Sbjct: 360 VSSNGMEILAVDVFYLH--HANPAVSKLLQLLNKFNIQLIGIGNGTACRETEELVSRFIY 417 Query: 404 QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPK 463 K + IV+E+GAS+YS +E A QE PDLD +LR AVSIARRLQDPL ELVKID K Sbjct: 418 VSCKKDLKYCIVNESGASIYSVTEEAKQEMPDLDPNLRSAVSIARRLQDPLVELVKIDAK 477 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAW 523 +G+G YQHD+ + L +VVEDCV VGVDLN A LL VAGL + I+ W Sbjct: 478 HLGIGMYQHDIPDILMKATLQSVVEDCVTFVGVDLNVAGASLLRHVAGLKKTQVDKILKW 537 Query: 524 RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI--------------------------- 556 R++NG F NR QLL+V +G K FEQCAGF+RI Sbjct: 538 REKNGPFINRDQLLEVPGVGKKTFEQCAGFMRIVQKANTPSECQKKSVKTEHVKTEPTDK 597 Query: 557 -----------------NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN------ 593 +H NPLD + +HPE+Y E+ L + ++ + Sbjct: 598 RKRKITATSKNSKKQKLHHEVNPLDQTWIHPESYKTTEQFLKKINLSSSEVGKDYFISNI 657 Query: 594 SSELRNLKASDFTDE-KFGVPTVTDIIKELEKP--GRDPRPEFKTAQFADGVETMNDLQP 650 +R S F +E + G PT+ II L P RD R + + G+ + DL+ Sbjct: 658 KQAVRKKTISQFANELEVGEPTLQLIIDGLSAPCGYRDIRN-VTSHFYKTGISCITDLRC 716 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++G V+NV +FG FVDIGV DGLVH S + K+ E+ V+ D++ V V V+ Sbjct: 717 GTTMQGKVSNVVDFGIFVDIGVGTDGLVHSSDMKGKW-EELRHVLGPNDLISVAVTNVNK 775 Query: 711 QRKRIALTM 719 +KRI+L + Sbjct: 776 PKKRISLRL 784 >UniRef50_A6LJP5 RNA binding S1 domain protein n=1 Tax=Thermosipho melanesiensis BI429 RepID=A6LJP5_THEM4 Length = 662 Score = 578 bits (1490), Expect = e-163, Method: Composition-based stats. Identities = 253/717 (35%), Positives = 395/717 (55%), Gaps = 58/717 (8%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 IIA E++ + QV A+ LL E NT+ F++RYRK+ TGGL++ QLR +E R YLR Sbjct: 1 MEHIIAKELEIKSWQVKNAIELLKE-NTIHFVSRYRKDQTGGLNEIQLRKIEKRYKYLRN 59 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 +E+ + ILK + + G LT L K I T + ELED+YLP+K +++T+ IAIE GL P Sbjct: 60 VEQLKIKILKILEKDGVLTPQLKKKIEHTFTLNELEDIYLPFKKRKKTKADIAIENGLLP 119 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ + + + V + + ++G IL ++F+ + + K+ +L Sbjct: 120 LAEK------------STKGTINLELVNEKEKIIEGITDILAQKFSHNDIVRKKLEIFLI 167 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 K + K ++ K+ Y + + LS + H L++ RG EG L++ L +F Sbjct: 168 KYGY---VKCKKKVKKKTKYDMYDNFTKKLSLLHPHNILSINRGEKEGALKVKLYLPEKF 224 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 E L N + + + W+ + +E + + E+AE+ Sbjct: 225 KEDI--------------FNLMNWNKNEIVEKGLKKGWK-ILFSSIEKRVRKILTEKAEE 269 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--Q 363 +I VF++NL LL+ P + +DPG +TG K+ +D G + IYP Sbjct: 270 RSIKVFSKNLKQLLLTPPLKNTRILAIDPGNKTGCKIVALDELGNPLEHAVIYPTAPYFD 329 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 + + + + H ++L+ IGNGTASRET++F K++ + + + +EAGASVY Sbjct: 330 TKNSEKKILKMLQNHKLKLIVIGNGTASRETQQFIAKTIKKY-NLKTKYIFSNEAGASVY 388 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 S S++A +EFP LD ++R A+SI RR+QDPLAELVKIDPKS+G+GQYQHD++Q +LA +L Sbjct: 389 SVSDIAIEEFPTLDPTIRSAISIGRRVQDPLAELVKIDPKSLGMGQYQHDINQKKLAEEL 448 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 V D VN +G+DLN+AS LL VAG+T +A+ IV +R + G+F R+QLL++ LG Sbjct: 449 KNAVTDIVNQLGIDLNSASSKLLEHVAGITPSLAKKIVNFRKKIGKFTERKQLLEIEGLG 508 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 K + QCAGFLRI +G NPL+++ +HPE Y + IL L L + Sbjct: 509 QKTYTQCAGFLRIKNGKNPLESTAIHPEHYKIANEILKNNIYDLDYLSKKFN-------- 560 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 G+ T+TDII EL+ G++ T F + + +L+ GM L+G V N+T+ Sbjct: 561 ------VGILTLTDIINELKSMGKE--DNLPTPIFYNEITDFKELKIGMKLKGKVINITD 612 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 FG FVDIG+ + G +H + + +K DI+ V+V+++D + I L R Sbjct: 613 FGIFVDIGLKESGFIHKKLIDKE--------IKINDIIDVEVIDIDNDLRYIKLKSR 661 >UniRef50_B7Q3H7 Putative uncharacterized protein (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q3H7_IXOSC Length = 765 Score = 572 bits (1474), Expect = e-161, Method: Composition-based stats. Identities = 227/764 (29%), Positives = 364/764 (47%), Gaps = 61/764 (7%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 ++ + AR + V V +L + T+PFIARYR+E TGGL +L+N++ L Sbjct: 7 WKVDLAVSASVNARVDVVRNVVDMLQKDCTIPFIARYRREQTGGLQADELQNIQQTYQSL 66 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRTRGQIAIEAG 122 ++++ Q +L ++++ K + K I + S EL+ ++ PYK K ++ Q A G Sbjct: 67 LSVKKKAQTMLAHLAKEEKGDATVKKLIISAKSLEELDHIFAPYKEAKGKSLAQRAKLLG 126 Query: 123 LEPLADLLWSD----PSHTPEVAAAQYVYAD-------------KGVADTKAALDGARYI 165 LE A+ + + PE V + V T+ L G R Sbjct: 127 LEDSANRILQGQTTVEALPPETLVKPEVKGNLELSGSSEKLSSLSPVKTTEWGLKG-RDP 185 Query: 166 LMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA--KFRDYFDHHEPLSTVPSHR- 222 + R ++ ++ + GK+++ A K+ +Y + + +V ++ Sbjct: 186 WLVRMSKSPGIMLTATKSSSAAKKAKEALTEGKQQDHADKKYDNYINFSRDVRSVQPYQA 245 Query: 223 --ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVS 280 LA+ RG ++ +L + + P F + ++C + + + V Sbjct: 246 RSVLAINRGESQKMLTVKVVLPPSFPVSVR-NFCASRVREQGAKMYGGTL--RLVESAVE 302 Query: 281 WTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGV 340 + + HL + T+ + AE E++NVF NL LL+ P A +G+DPG + G Sbjct: 303 DAYSRLLEPHLIRSIRSTLTKVAEQESVNVFRSNLRQLLLTPPVRGHAVLGIDPGFKHGC 362 Query: 341 KVAVVDATGKLVATDTIYPH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 K+A V A+GKL+ I+PH A + L HN +L+A+GNGTA RETE F Sbjct: 363 KLAAVSASGKLLQHSVIHPHASPASRYSAGNILRQLVVTHNCDLIALGNGTACRETEAFL 422 Query: 399 LDVQKQ--FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAE 456 ++ Q F V + + E+GAS+YS ++ A E P LD ++R AV IARRLQDPL E Sbjct: 423 SELISQRAFMPVPVKFCTIDESGASIYSVTKEAEAELPGLDPNIRSAVGIARRLQDPLLE 482 Query: 457 LVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMM 516 VK++PK +GVG YQHD+S++ L L+ VV +CV+ VGVD+N +L +V+GL Sbjct: 483 YVKVEPKHLGVGMYQHDISESVLKNALEGVVVECVSFVGVDINVCPETILRKVSGLNAGT 542 Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRL--------------GPKAFEQCAGFLRINHGDNP 562 A+NIV WR+ +G F+NRQQLL + + G Q +++ +P Sbjct: 543 AKNIVDWRETHGPFKNRQQLLSLQSVTNENKVCFHLFQRNGSSVPAQKQKSKKVSDEFDP 602 Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT-------- 614 LD + +HPE+Y E ++ + +D+ + S E Sbjct: 603 LDMTIIHPESYRFAELLICHLKLKKEDIGKQHFIETVKRESSRLGEHMAGTVRALAVQAL 662 Query: 615 -VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V+ I +E E F GV ++++++ G L G V N T FGAFVDIGV Sbjct: 663 PVSVIFLYIEPGPAFLLTEQHQPLFKSGVVSLDEIEVGQELTGKVKNCTQFGAFVDIGVG 722 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 +DGL+H S ++ V GD V V V+ ++ R RI L Sbjct: 723 KDGLIHCSQMNGHRV-------NLGDRVTVLVVNLERSRGRIGL 759 >UniRef50_B7IFY9 S1 RNA binding domain protein n=1 Tax=Thermosipho africanus TCF52B RepID=B7IFY9_THEAB Length = 675 Score = 569 bits (1467), Expect = e-160, Method: Composition-based stats. Identities = 246/717 (34%), Positives = 404/717 (56%), Gaps = 46/717 (6%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 ++I+ ++ QV A+ LL E NT+ F+ARYRK+ TGGL++ QLR ++ Y + Sbjct: 1 MEKLISKKMNLENWQVKNAILLLKE-NTIHFVARYRKDQTGGLNEEQLREIQNLFHYYEK 59 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 +E+ ++ ILK++ ++ KLT +L K I + ELE +YLPYK K++++ IAIE GL Sbjct: 60 VEKEKKKILKALEKENKLTIELKKKIENSYDLDELEQIYLPYKKKKKSKADIAIENGLLE 119 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 L + L ++P + + +K ++G I+ + F+ D + ++ ++ Sbjct: 120 LYNKLINNPESFEKEIPKYF---NKIFDTKDKVIEGLINIIAQNFSHDENIRKRLEFLIF 176 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + +L T + K+ Y + + + + + L++ RG E +L++ + D +F Sbjct: 177 EYGYLKCTKKV---DYKTKYDAYENFSQKIKNLKEYSVLSINRGEKENILKVQIVLDDKF 233 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 K + +D + WRK + ++ + + ++AE+ Sbjct: 234 ----KNEIFKLTKLDLKNEIILKGLELGWRK----------LFDSIKKRIRNQLTQKAEN 279 Query: 306 EAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG--Q 363 AI +F++NL LL+ P + + +DPG +TG K+AV+D GK + I+P Sbjct: 280 RAIVIFSKNLKQLLLTPPLKDKRILAIDPGNKTGCKIAVLDENGKFLEKAIIFPTPPHND 339 Query: 364 AAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVY 423 + V L +K ++ L+ IGNGTASRET++F ++ K+F + + + +EAGASVY Sbjct: 340 IENSEKIVIELIKKFDLNLIVIGNGTASRETQKFIVNTIKKF-NLDVKYIFANEAGASVY 398 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 S S+LA +EFP+LD ++R A+SI RR+QDPL+E VKIDPKS+GVGQYQHDV+Q +L +L Sbjct: 399 SVSKLAMEEFPNLDPTIRSAISIGRRVQDPLSEFVKIDPKSLGVGQYQHDVNQKRLEEEL 458 Query: 484 DAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 + + +D VN VGV+LNTAS LL V+G+T +A+ IV +R+++G+F R QLL + LG Sbjct: 459 NNITKDVVNMVGVNLNTASAKLLEYVSGITPSLAKKIVKYREKHGKFIERNQLLNIEGLG 518 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 K FEQCAGFLRI G NPL+ S +HPE Y + +I+ S L N+ Sbjct: 519 EKTFEQCAGFLRIIDGKNPLEKSRIHPEQYEIANKII-------------SLNLDNIDIE 565 Query: 604 DFT-DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 + + G+ T+ DII EL+ PG DPR + D + T DL+ G+ L+G VTN+T Sbjct: 566 KLSRELNVGILTLKDIINELKNPGLDPRESIPKPKLFDDILTFEDLRIGLRLQGKVTNIT 625 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +FGAF+DIG+ + + + + + DIV ++++++D Q + I + + Sbjct: 626 DFGAFIDIGLKESAFL--------YKKLITRDLNINDIVDIEIIDLDQQLRHIKVKL 674 >UniRef50_C1FHE5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1FHE5_9CHLO Length = 768 Score = 559 bits (1440), Expect = e-157, Method: Composition-based stats. Identities = 277/745 (37%), Positives = 377/745 (50%), Gaps = 44/745 (5%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 IA E+ R V AV L+DE TVPFIARYRKE TGG+D+ LR + RL L Sbjct: 17 RTLDAIARELGLRERHVREAVALMDEECTVPFIARYRKEATGGMDERALRRVADRLGELD 76 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 +LE+RR AIL ++ + G L LA+A+ A + T LEDLYLP++PKR TR A++ GL Sbjct: 77 KLEQRRDAILAALEKSGDLNPALARAVAAADTPTRLEDLYLPHRPKRATRASAALDLGLG 136 Query: 125 PLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYL 184 PLAD L DPS + GVAD AA+ GAR I+ E Sbjct: 137 PLADDLL-DPSTPYSRGFIRRFVKAPGVADDDAAMRGARDIVAE---------------- 179 Query: 185 WKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 K V + + RDY + + H+ LA+ R GV+++S+ D Sbjct: 180 -KAGECVEAREAARRASRDAARDYLSFERDIQRIQPHQYLALCRAETAGVVRVSVEWDDT 238 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 + + + + V + + E E +R+ A Sbjct: 239 PAVDAARRALVR--------KGLRGEKAAEVEAAVKDGVKRLLRPAAERETRARLRDDAI 290 Query: 305 DEAINVFARNLHDLLMAAPAGLRA-TMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQ 363 A+ F N+ L++A P A +GLDP RTG K+A V ATG ++A ++P Sbjct: 291 RRAVRDFGANVAALILAPPMRPAAPVVGLDPAHRTGCKIAAVSATGAVLAAAVVHPRRED 350 Query: 364 AAKAA-----MTVAALCEKHNVELVAIGNGTASRETERFYLDVQ----KQFPKVTAQKVI 414 A A CE+H VA+G+G +RE ER K + Sbjct: 351 ANAAGGGEAGRRFREFCERHGARAVAVGDGVGTREAERMVAAALAGSKKSGSTSGIGWRV 410 Query: 415 VSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV 474 VSE GASVYSASELA E PDLDVSLRGAVSIARRLQDP+AELVKI+P+ +GVG YQHDV Sbjct: 411 VSECGASVYSASELAIAELPDLDVSLRGAVSIARRLQDPMAELVKIEPRHLGVGLYQHDV 470 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQ 534 +LA +LD VE V A GV+LNTAS LL RV G+++ +A+ VA R+ G F +R+ Sbjct: 471 RAKELAAELDQAVESAVAAAGVNLNTASAALLARVPGMSKSLAEKTVAHRESRGPFASRR 530 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 LL V +G K F+Q AGFLR++ + L+ + VHPE Y + + L+ + + Sbjct: 531 GLLDVKGVGEKTFQQAAGFLRVDSAKDALEMTAVHPEGYEAAMEVRLEDLRRLRPAIDSL 590 Query: 595 SELRNLKASDF---TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ-FADGVETMNDLQP 650 + G T+ + ++ + KPG D R F A ++ DL+ Sbjct: 591 LGRGASDPEFKTIASAAGIGELTLKETLRAMAKPGVDDRDVFDAASRLRTSALSLTDLKV 650 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL----SNKFVEDPHTVVKAGDIVKVKVL 706 G +LEGAV NV FGAFVD+GV GLVH S++ +PH V+ AG V+V+V+ Sbjct: 651 GDVLEGAVRNVVPFGAFVDVGVGVSGLVHKSNMRGGNDKGRAPEPHEVLSAGQAVRVRVM 710 Query: 707 EVDLQRKRIALTMRLDEQPGETNAR 731 VD QR RI L + E+ E Sbjct: 711 SVDAQRNRIGLALLHRERRAEVAPP 735 >UniRef50_Q59DV5 CG31156, isoform B n=13 Tax=Drosophila RepID=Q59DV5_DROME Length = 993 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 229/817 (28%), Positives = 383/817 (46%), Gaps = 106/817 (12%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + ++A +P+ V+L ++ NT+PFI RYR+++ + +LR++ + + Sbjct: 183 WNIDELLAETESIQPQAARNIVKLFEDENTIPFICRYRRDLVDHIAPDRLRDIRNTYTEI 242 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEAG 122 +L +R + I+ + + +T ++ + + S ELE LY PYKP + T + A G Sbjct: 243 VDLRKRAENIIGKLQRENIMTPEIREELMCAKSNEELEFLYAPYKPASKGTLAERAKALG 302 Query: 123 LEPLADLLWSDPSHTPEVAAAQYV-YADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 L+ AD L + P+V ++ V ++ +A + G I++ +++ +L ++R Sbjct: 303 LQVYADCLLYGSA--PKVNLSEIVDRRNEALATEALVMSGICQIIIHNISKNTNVLEEIR 360 Query: 182 DYLWKNAHL------------------------VSTVVSGKEEEGAKFRDYFDHHEPLST 217 + S + K+ + +KF +YF+ + T Sbjct: 361 RLQNVHRVFLKCSKTKEAKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNFQGDVKT 420 Query: 218 VPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKG 277 + ++ LA+ RG L + + + ++ K I ++ L Sbjct: 421 IKPYQMLAINRGEKHKWLSVKI----ETNDYLKRDLMRYITDQYMNQGLQYPLRREVFTK 476 Query: 278 VVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLR 337 + + K+ + ++ ++E+ AI+VFA+NL LL+ +P +G+DPG Sbjct: 477 SLEECYAKKLQPLMCRQIRAALKEKGTKAAIDVFAKNLKQLLLISPLKGERILGIDPGFI 536 Query: 338 TGVKVAVVDATGKLVATDTIYPHT--GQAAKAAMTVAALCEKHNVELVAIGNGTASRETE 395 G K+A++ T ++ T IYPH A + L HN +++ +GNGTA RETE Sbjct: 537 NGCKLALISETADVLYTGVIYPHGAMSNKRAAEQKLVQLLSDHNCKIIGLGNGTACRETE 596 Query: 396 RFYLDVQKQ--FPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 + + + IV+E GAS+YS S +AA+EFP +D + R AVSIARRL DP Sbjct: 597 HWLTGMFHAGVLDSRIIRYSIVNENGASIYSCSNVAAKEFPKMDTNERSAVSIARRLNDP 656 Query: 454 LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT 513 L+E VKI+P+ +GVG YQHDV + L L+ VV +CV+ VGVDLNTAS+ +L +AGL+ Sbjct: 657 LSEYVKIEPRHLGVGMYQHDVPEKILTASLNDVVSECVSYVGVDLNTASLSVLKHIAGLS 716 Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG------DNPLDAST 567 A+ I+ R + G F+ R+ LL V +G K+F QCAGF+RI NPLD + Sbjct: 717 EKKAEKIIEHRTQKGPFKTRKDLLSVRSIGEKSFVQCAGFVRIEPRSVGGQLQNPLDCTW 776 Query: 568 VHPEAYPVVERIL---------------------------------------AATQQALK 588 VHPE+Y VVE + + + Sbjct: 777 VHPESYNVVESLAFSSAALTNKEVSLGVTMSLSCCVMPAMFFGQSSSKFLRFVTSSIVGE 836 Query: 589 DLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF--------------- 633 + S + + P + I K+ + P Sbjct: 837 CDLKLSDVGKAAFIASIKQFASSQPNLDRIAKQHKLPMERLEFLLVALQRELLQDYRADL 896 Query: 634 -KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 K F G+ ++DL G ++ GAVTNVT FGAFVD+GV ++GL+H S+++N Sbjct: 897 DKRPLFKQGLTRLDDLSMGEVVTGAVTNVTQFGAFVDVGVERNGLIHNSNMNNSQ----- 951 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + GD + V++VDL+R++ L +RL+ ET+ Sbjct: 952 --LSVGDRIVASVVKVDLKRRQ--LELRLENMLMETD 984 >UniRef50_A4RY29 Predicted protein n=2 Tax=Ostreococcus RepID=A4RY29_OSTLU Length = 794 Score = 553 bits (1426), Expect = e-156, Method: Composition-based stats. Identities = 260/759 (34%), Positives = 383/759 (50%), Gaps = 64/759 (8%) Query: 15 QARPEQVDAAVRLL-DEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAI 73 R EQ+DAA+RLL DE T+PF+ARYRKE T GLD+ QLR + + LE +R++ Sbjct: 45 DVRREQIDAALRLLIDEQCTLPFVARYRKERTDGLDEGQLRAVAAAHAEWTRLESKRESA 104 Query: 74 LKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSD 133 ++++ + + L + + +EDL YK K +R A E G EPLA+ + SD Sbjct: 105 FEALTRLEIVDERLFARLREASAVETIEDLMSKYKTKTSSRADRARELGCEPLAEKILSD 164 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST 193 + E A YV + V D AL A+ +L ER A + + R W+N L Sbjct: 165 GAGGVEALARAYVNGND-VPDVCEALRLAKDVLAERAANETSAREAARRSTWQNGRLQCA 223 Query: 194 VVSGKEE-------------EGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 + + + RDY++ + PL V H+ LA+ RG VL++ ++ Sbjct: 224 LTTNGKAAVEGKIDDKKMKKIADALRDYYEFNAPLRRVKPHQTLAILRGEAAKVLRVKID 283 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 D + +G R + V + + +E E ++ Sbjct: 284 FDVAWATSAAMKAM-------VGSRRLGGGCYNVVSEAVEDGVKRLLAPSIEREAKSRLK 336 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLR-ATMGLDPGLRTGVKVAVVDATGKLVATDTIYP 359 A + AI F NL LL+ P +G+DP RTG K+AVVD TG L+ T ++ Sbjct: 337 TEAMERAIADFGANLRSLLLQPPLTPAAVVLGVDPAYRTGCKLAVVDPTGALLDTGVVHL 396 Query: 360 HTGQAA---------KAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA 410 ++ AA + AL ++ NV+ +AIG+G ASRETE F Sbjct: 397 PQFESKVKREGGGQSAAASKLQALVKQWNVKAIAIGDGVASRETESLVATALAGFE--GV 454 Query: 411 QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQY 470 +VSEAGASVYSASE+AA+E PD+DVSLRGAVSIARRLQDP+AELVKI+P+SIG+G Y Sbjct: 455 GWRVVSEAGASVYSASEIAAKELPDIDVSLRGAVSIARRLQDPMAELVKIEPQSIGIGLY 514 Query: 471 QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 QHDV + +LA L A VE V VG +LNT+S LL+R+ GL +A IV R E G+F Sbjct: 515 QHDVKEKELADALTATVESAVANVGANLNTSSQSLLSRIPGLGPSLAAKIVRHRSERGRF 574 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 + R L ++ +G K +EQ GFLR+ + L+ ++VHPE+Y + +++L ++ + ++ Sbjct: 575 RERAALKTIAGVGAKTYEQIIGFLRVPDAKDALERTSVHPESYHIAKKLLKMLERDVAEV 634 Query: 591 MG---------NSSELRNLKAS-------------DFTDEKFGVPTVTDIIKELEKPGRD 628 + + L+ LK K T+ DI EL PG D Sbjct: 635 IDLTASDAGDTSMDALKRLKPKLKALRDDVKDLEARAARLKCHPLTLKDIANELSAPGDD 694 Query: 629 PR-PEFKTAQFADGVETMNDLQPG-MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 R + T+ DLQ G I V NV FG F+D+GV +D L+H++++ + Sbjct: 695 ARGQAAEQNVLRTQALTLEDLQTGAEIKNAVVRNVVPFGCFLDLGVGRDALLHVTAMRKR 754 Query: 687 FVE------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 DPH + + G V+V VD+ R+RIA+ + Sbjct: 755 TDANPNAQIDPHALYRVGQTCAVRVKSVDIARQRIAVEL 793 >UniRef50_UPI0000DB7BEF PREDICTED: similar to S1 RNA binding domain 1 n=1 Tax=Apis mellifera RepID=UPI0000DB7BEF Length = 740 Score = 553 bits (1424), Expect = e-155, Method: Composition-based stats. Identities = 236/752 (31%), Positives = 361/752 (48%), Gaps = 93/752 (12%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELE 67 I+ + V+L + NT+PFIARYRK++TGG++ +LR L+ + + ++ Sbjct: 38 NYISEMNNVEKHIAENIVKLFNNDNTIPFIARYRKDMTGGMEPDKLRALKESFDHAKMIK 97 Query: 68 ERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPK-RRTRGQIAIEAGLEPL 126 +R ILK+I + G+ + D+ AI + +LE +Y +KP +RT + A + GL + Sbjct: 98 QRAHTILKAIDKLGQWSPDIHFAIISAKCLDDLEHIYSLFKPSSKRTLAEKAKDLGLGYI 157 Query: 127 ADLLWSDPSHTPE----VAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 +DLL E + + + +K V + + + Sbjct: 158 SDLLLQVKELQNESIIKIQSTECKPKNKSVNNKEKNM----------------------- 194 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 K+ YFD + ++ H+ LA+ RG + +L + + Sbjct: 195 -------------------HRKYEIYFDFNTNNRSIKPHQILAINRGEAQKILTIKIILP 235 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 F E ++YC + + + + + + + + + + ++ + Sbjct: 236 -DFFEKEFKTYCYKY---YRIAMIVSKLHSKLLNNSIDYAYTKFIKPLVIRRVRSEMKRK 291 Query: 303 AEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT- 361 AE +I VF N+ LL+ P + +G+DPG G K+AV+ G ++ T IYPH Sbjct: 292 AEIASIEVFVNNVKQLLLTPPVRGKIILGIDPGYSHGCKLAVISEQGDVLETGVIYPHRN 351 Query: 362 --GQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQ--FPKVTAQKVIVSE 417 ++A + L K+ ++A+GN TA RETE F + K F + IV E Sbjct: 352 IEKTYNESANVLINLVTKYKATILALGNATACRETEIFINKLIKSNSFESLDVSYAIVDE 411 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQT 477 +GAS+YS S A EFP LD++L A+SIARRLQDPLAELVK++PK +GVG YQHD+ + Sbjct: 412 SGASIYSCSPEAKSEFPKLDMNLISAISIARRLQDPLAELVKVEPKHLGVGMYQHDLPEK 471 Query: 478 QLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 QL L+ VV + V+ VG+D+NTAS LL RVAGL A NI+ WR E G F+NRQQL+ Sbjct: 472 QLLTSLNEVVSEVVSFVGIDVNTASQCLLKRVAGLNVSRANNILEWRSEFGPFKNRQQLM 531 Query: 538 KVSRLGPKAFEQCAGFLRINH-----------------------GDNPLDASTVHPEAYP 574 V +G K FEQC GF+RI N LD + +HPE+Y Sbjct: 532 DVKGIGSKVFEQCIGFIRILPETSMIDNSKKLRPIKKSKQAIKAEYNLLDQTWIHPESYK 591 Query: 575 VVERILAATQQALKDLMGNSSELRNLKASD------FTDEKFGVPTVTDIIKELE-KPGR 627 + E L LK+L + + T+ IIK L K Sbjct: 592 IAENFLKYCNIDLKNLGTTEFIEKVKLYAKEGFTSLAEKFDTNKTTMEIIIKGLSMKKDE 651 Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 D R + ++ F + T++D+ M+L GAV N+T+FG FVDIG +DGL+ L N Sbjct: 652 DIRLKTRSPLFRKSMLTISDINVEMLLTGAVRNITHFGVFVDIGAGKDGLIPTKWLKNFT 711 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + G V+VKVL VDL+R RI L + Sbjct: 712 I-------SIGQRVEVKVLSVDLERNRINLEL 736 >UniRef50_B3S0I4 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S0I4_TRIAD Length = 796 Score = 528 bits (1359), Expect = e-148, Method: Composition-based stats. Identities = 220/787 (27%), Positives = 353/787 (44%), Gaps = 79/787 (10%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 + + +A QA V A+ LL EGNTVPFI RY+ + G++D ++ + Sbjct: 14 YIKRLAQRYQANEVAVKNAIALLREGNTVPFIVRYKSSMIQGINDINIQQIRNDYEDFIL 73 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRR-TRGQIAIEAGLE 124 L+E + + + + G LT L + ++ S E+++L +K + A + GL+ Sbjct: 74 LQEESKKLKTRLQKSGALTLQLEQELDRAESVEEIKELAKQFKTTPTGSLADRAKKLGLD 133 Query: 125 PLADLLWSDPSHTPEVAAAQYVYAD-KGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 LA LL + +V ++ D +G+A + +G ++IL A+++ + V Sbjct: 134 KLATLLLENKID--QVNFKSWIKRDTQGLASIEEIQNGVKHILANVIAKNSNCRSYVGKL 191 Query: 184 LWKNAHLV--STVVSGKEEEGAKFRD----YFDHHEPLSTVPSHRALAMFRGRNEGVLQL 237 S+ ++ F + Y + ++ V H+ LA+ RG E +L + Sbjct: 192 FKNAEITSFLSSTTIKQQMHNPSFDNVLERYSNFQRKVTHVLPHQVLALNRGEREKILTV 251 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 + AD + E +I + + + E + Sbjct: 252 KIKADFKAQEKFCTWARNEI----FPFVPKRKDVERIFNEATKDAFVRLLQPAEERRIRV 307 Query: 298 -----TVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDA----T 348 + +A+ A+++F +NL +L+ + +G+DPG + G K+A++D T Sbjct: 308 VIARRNLTCQAQKAAVSIFTQNLRRMLLTPSVSGKVILGIDPGYKNGCKLAIIDKLGVIT 367 Query: 349 GKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ--KQFP 406 G+++ IY H + ++A T+ L + L+AIGNG A R+ E ++ + F Sbjct: 368 GEVLHATIIYIHDARISEAEATLVNLVQGFKCSLIAIGNGCACRDVETLLSNLTSRRAFN 427 Query: 407 KVTAQKV-----IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKID 461 + V+E+G+S YS SEL E P L +LR AVSIARRLQ+PLAE+ K++ Sbjct: 428 FQKVKYCKMSFSFVNESGSSWYSISELGRAELPKLMPNLRSAVSIARRLQNPLAEMTKVE 487 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIV 521 PK +GVG YQHD+ L + + V+E CV+ VG+D NTA V +L VAGL A+ IV Sbjct: 488 PKHLGVGMYQHDIPDKLLEKAVKGVLEACVSFVGIDCNTADVTMLQHVAGLNLKCAKAIV 547 Query: 522 AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH----------------------- 558 +R ENG NR+QL K+ +GPK FEQCAGFLRIN Sbjct: 548 EYRKENGPLCNREQLKKIKGIGPKTFEQCAGFLRINPASYEENLSNYTSLTVSTSSGKRK 607 Query: 559 -----------------GDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR--- 598 N LD + +HP+ YP + L + D+ + Sbjct: 608 ISTDSSIVARKKQRIIAESNKLDMTIIHPDNYPSALKFLRYLGATMDDIGDQKLIEKVTL 667 Query: 599 NLKASDFTDEKFGVPTVTDIIKEL-----EKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 L F + + +D+ K L + D R ++ F + ++ + G I Sbjct: 668 QLNIPGFEALQKCLGIDSDVFKNLCDALQQNLDFDIRSDYDEPVFRSSIISLQSIVNGTI 727 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD-LQR 712 L G V NVT FG FVD G+ DG++ I E + GD VKVKV V + Sbjct: 728 LTGCVRNVTTFGIFVDCGLGTDGMIRIGEEVITQSESEKRPLGPGDRVKVKVKRVSGVNN 787 Query: 713 KRIALTM 719 KRI L + Sbjct: 788 KRILLEL 794 >UniRef50_B2S4G1 Protein Tex n=4 Tax=Treponema RepID=B2S4G1_TREPS Length = 528 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 192/533 (36%), Positives = 287/533 (53%), Gaps = 24/533 (4%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + D +A E+ R QV A LL EG TVPFIARYRKE LD+ +R+ E Sbjct: 13 VQEDELAERVARELHIRTAQVTAVRSLLKEGCTVPFIARYRKEAHHCLDEVLIRDCERLF 72 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 E RR I++++ ++G LT L + + + + LEDL+ P+K K++TRG AIE Sbjct: 73 HTHLARETRRLEIIRAVFKEGMLTPTLYEHLRSAPTLAALEDLWAPFKKKKKTRGMQAIE 132 Query: 121 AGLEPLADLLWSDPSHTPEVA------AAQYVYADKGVADTKAALDGARYILMERFAEDA 174 GLEPLA L+ + + E+ A +D+ V+ + A+ GA IL E A Sbjct: 133 KGLEPLARLIETQCATQAEIERAAAALVAPAADSDRAVSSAQDAIAGACDILAEETAHCN 192 Query: 175 ALLAKVRDYLWKNAHLVSTVVSG-KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEG 233 A A ++ + + +T + + ++ Y+D+ E + + +HR LA+ RG EG Sbjct: 193 ANRAALKSFYLSAGVVTATGIGDAHAAHTSVYQMYWDYAEAVRDIKAHRVLAINRGEREG 252 Query: 234 VLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET 293 +L + + D + P + + + ++ + + Sbjct: 253 ILDVKITVDLDAAVEQVQEAV--------------HPNNRYHRDAITDGVVRLLSPAVLR 298 Query: 294 ELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVA 353 E+ + AE INVF+ NL +LLM P +G+DPG+RTG K A +D TG+ + Sbjct: 299 EIRADLTASAEQHGINVFSENLTNLLMTQPVKGTRVLGIDPGIRTGTKCAALDETGQYLG 358 Query: 354 TDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 + IYPH A + +++ ++LVA+GNGT S + + + Sbjct: 359 SFVIYPH--NTDHARAALTQALDRYRIQLVAVGNGTGSHAVQELIASIISETHS-AVAFT 415 Query: 414 IVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHD 473 +V E GASVYSA ++A +EFPDLD+++RGA+SI RRLQDPLAELVKIDPKSIGVG YQHD Sbjct: 416 VVEEDGASVYSAGDIAREEFPDLDLTIRGAISIGRRLQDPLAELVKIDPKSIGVGLYQHD 475 Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE 526 V+Q +L+ +L AVV+ VN+VGV+LNTASV LL V+G+ +A+ IV R Sbjct: 476 VNQKKLSEELHAVVDAVVNSVGVNLNTASVSLLKHVSGVNSALAKRIVHHRAT 528 >UniRef50_Q4DZK1 Transcription modulator/accessory protein, putative n=4 Tax=Trypanosoma RepID=Q4DZK1_TRYCR Length = 986 Score = 501 bits (1289), Expect = e-140, Method: Composition-based stats. Identities = 212/712 (29%), Positives = 344/712 (48%), Gaps = 32/712 (4%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + + RII + P V +G+TVPF+ARYR++ TG LD+ LR L Sbjct: 40 IAQERLYRIIGARMSISPAIARFVVEQTKKGSTVPFLARYRRDETGHLDEKALRQLIDMA 99 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 L+E++ RR +LKS+ +G LTD+L +A + L +LED + P+K K+ + E Sbjct: 100 EELQEVQRRRAFMLKSLKSRGLLTDELREAFDKLLHLNQLEDAWEPFKEKKTSLSYRGRE 159 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 AGLEPLA L +V + + K + I++E + + Sbjct: 160 AGLEPLAKKLLYTSEPLTDV--------SEKLRSVKDGAKLFQAIIVEEVQRCDEVRQLM 211 Query: 181 RDYLWKNAHLVSTVVSGKEEEGA-------------KFRDYFDHHEPLSTVPSHRALAMF 227 ++ + S++ + ++ A KF Y + + + +H LA+ Sbjct: 212 LAECRQSGVISSSLAAAPRKKNAKEIGTDAFETLKKKFAAYENRRWSVQRISAHNVLALQ 271 Query: 228 RGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV 287 RG ++GVL + + + + + + A + + + Sbjct: 272 RGESKGVLLVKMIPHSRSKYTFFSWARRKFVGFQRRE---DPKATRLLNQCLEAAYENIM 328 Query: 288 LMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDA 347 + +++ AE EAI VFA +L +LM P + +DPG+ GVK +D Sbjct: 329 K-ATHNIIRRDLKKSAEKEAITVFAHSLRHILMQCPMRNARILAMDPGVTKGVKCVALDE 387 Query: 348 TGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPK 407 G ++ A ++ +K + + IGNGTASRE D ++ Sbjct: 388 NGGVL--TRFKCIIMDKANMRDYISGCVDKLKLNKIVIGNGTASREVADIVADTIEE-RG 444 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGV 467 ++ + IVSEAGASVYS S++A +EFP LD RGAVSI RR+ DPL+ELVKI +S+G+ Sbjct: 445 LSVEYAIVSEAGASVYSVSDVAREEFPTLDPMYRGAVSIGRRVIDPLSELVKIPVRSMGI 504 Query: 468 GQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDEN 527 G YQHD+S+ +L R L+ VVE CV VGV+ ++ ++ ++ G+T+ + IV R Sbjct: 505 GMYQHDISEMELLRALNRVVESCVTCVGVNALISNRYVMEKIPGVTKSIVDQIVLARYAK 564 Query: 528 GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQAL 587 ++R+ L +V + ++Q AGF R + NPLD + +HPE+Y V+++L + Sbjct: 565 K-LKSREDLRRVPGMTEVTYQQVAGFFRFPNSTNPLDNTNIHPESYSTVQKLLELYEGKE 623 Query: 588 KDLMGNS-SELRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFKTA-QFADGVET 644 + +GN LR+ + D G T+ + +EL P DPR E A F Sbjct: 624 RREVGNILLNLRDAELRDVASRIGCGEATLELVARELASPALDPRSELPHAGIFRRFPPK 683 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + DL+PG +L G V +VT FGAFVD+G+H + LV ++ D ++ Sbjct: 684 LADLKPGDMLRGIVQSVTTFGAFVDVGLHDNVLVRGVNIDTVHTGDLLDDLR 735 >UniRef50_Q497V5-2 Isoform 2 of S1 RNA-binding domain-containing protein 1 n=5 Tax=Amniota RepID=Q497V5-2 Length = 611 Score = 489 bits (1260), Expect = e-136, Method: Composition-based stats. Identities = 212/611 (34%), Positives = 303/611 (49%), Gaps = 66/611 (10%) Query: 170 FAEDAALLAKVRDYLW------KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRA 223 A+D L +R +++ + E+E KF+ Y + + T+ H+ Sbjct: 2 IAKDKDTLDFIRGLCKHRYICIQSSLAKVSSKKVNEKEVDKFQLYQNFSCNIRTIHHHQI 61 Query: 224 LAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLR-LNNAPADSWRKGVVSWT 282 LA+ RG N +L + +N K +C I + R + + Sbjct: 62 LAINRGENLKILTVKVNISD----GVKNEFCRWCIQNRWRPRGFARPELMKILHNSLDDS 117 Query: 283 WRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKV 342 ++ ++ L E + AE +++ +F +NL LL+ +P R MG+DPG + G K+ Sbjct: 118 FKRLIVPLLCREFRAKLTSDAEKQSVMMFGQNLRQLLLTSPVPGRTLMGVDPGYKHGCKL 177 Query: 343 AVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ 402 A++ T +++ TD +Y H GQ + A + L N V IGNGTA RETE ++ D+ Sbjct: 178 AIISPTSQILHTDVVYLHCGQGFREAEKIKRLLLHFNCRTVVIGNGTACRETEAYFADLI 237 Query: 403 --KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI 460 F + IVSEAGAS+YS S A +E P LD +LR AVSIARR+QDPLAELVK Sbjct: 238 MKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRVQDPLAELVKF 297 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNI 520 DPK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S LL +AGL A+NI Sbjct: 298 DPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIAGLNANRAKNI 357 Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-------------------- 560 + WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 358 IEWREKNGPFINREQLKKVKGLGPKSFQQCAGFVRINQDYIRTFCSQHTDSSGQSQETAM 417 Query: 561 -------------------NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 NPLD + +HPE+Y + R L+ + +G + + Sbjct: 418 VTNEKLGKKKNKADATLIPNPLDQTCIHPESYDIAVRFLSFIGGTM-CEIGKPEMQQKIN 476 Query: 602 A--------SDFTDEKFGVPTVTDIIKELEKPGR-DPRPEFKTAQFADGVETMNDLQPGM 652 + V T+ II L +P D R +F F + + DLQ G Sbjct: 477 VSLGKEGIEETAERLQTTVHTLQVIIDGLSQPKTFDIRTDFDKPDFKRSIVCLEDLQVGT 536 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV----VKAGDIVKVKVLEV 708 +L G V N T FG FVDIGV + GL+ I ++ + + G+ V+VKVL V Sbjct: 537 VLTGKVENATLFGVFVDIGVGKAGLIPIRFITEAKLSKTKRRRSLGLGPGEKVEVKVLNV 596 Query: 709 DLQRKRIALTM 719 D+ R RI+L + Sbjct: 597 DIPRSRISLDL 607 >UniRef50_Q4QH24 Transcription modulator/accessory protein, putative n=3 Tax=Leishmania RepID=Q4QH24_LEIMA Length = 1082 Score = 483 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 215/737 (29%), Positives = 333/737 (45%), Gaps = 66/737 (8%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYL 63 + R + + V + EG TVPF+ARYR+ TG +D+TQLR + + Sbjct: 105 EETYRQTSERLLLPLNAVRFVLTQAKEGATVPFLARYRQGETGRMDETQLRLVMDTAKEV 164 Query: 64 RELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGL 123 E+ RRQ +L+S+ +G LT L A+ + + ++LED + PYK +R + AGL Sbjct: 165 AEVHRRRQFMLRSLESRGLLTPALQTALESMVHVSQLEDAWEPYKERRTSLASRGRAAGL 224 Query: 124 EPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 P AD L P+ A + V T I+ E L ++ +Y Sbjct: 225 GPYADALLHFNPDDPDCKA-RLDELSAFVRRTDEGERLLTAIVAEDVQRSEVLRRRLGEY 283 Query: 184 LWKNAHLVSTVVSGKEEEGAK-------------FRDYFDHHEPLSTVPSHRALAMFRGR 230 A L ST+++ ++ AK F Y + + V +H LA+ RG Sbjct: 284 CRHTARLSSTLMAKPRKKAAKELHEESFEALRKHFAYYDNKSWSVQRVAAHVVLALQRGE 343 Query: 231 NEGVLQLSLNADPQFDEPPKESYCEQI---------------IMDHLGLRLNNAPADSWR 275 +G L++ + P+ + EQ D G + + Sbjct: 344 AKGALKVDTGSGPKSHGLFMHTVREQYPSLNRLLSLSSSSVPTADGAGAYSHVFRDFGYG 403 Query: 276 KGVVSWTWR---IKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGL 332 + +V + ++ + +++ AE EAI VFA NL +L+ P + + Sbjct: 404 RKIVHAGLQAAYDHIIKQAHFAIRRDLKKSAEQEAIVVFAHNLQHMLLQRPLSRSRILAM 463 Query: 333 DPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR 392 DPGL GVK +D G + T K V + E + + IGNGTAS Sbjct: 464 DPGLANGVKCVALDENGAVETFFT--CTLMDEQKMRRYVIQVVESRKLNKIVIGNGTASG 521 Query: 393 ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQD 452 D+ KQ + +VSEAGASVYS S++A +EFP+LDV RGAVSI RR+ D Sbjct: 522 RVTDLIADLIKQQKWTDVEFAVVSEAGASVYSVSDIAKEEFPNLDVMYRGAVSIGRRVLD 581 Query: 453 PLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGL 512 PL+ELVKI +S+G+G YQHDV++ +L R+L V+E CV VGV+ +A+ ++ +V G+ Sbjct: 582 PLSELVKIPVRSMGIGMYQHDVNEKELMRELSYVLESCVAKVGVNAASANRYVMEKVPGI 641 Query: 513 TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEA 572 + + IV R +R+ L +V + +EQ AGF R + PLD +++HPE+ Sbjct: 642 KKRIVDQIVLARHAKK-LHSREDLRRVPAMTESVYEQIAGFFRFPNSPEPLDNTSIHPES 700 Query: 573 YPVVERILAATQ----------------------------QALKDLMGNSSELRNLKASD 604 YP+V R++ + + + + + Sbjct: 701 YPLVRRLVTFYTAGQLGDGEAMAEKPGNAADGAATTLGDAHIRQQVAQQLERMSPAQLAS 760 Query: 605 FTDEKF--GVPTVTDIIKELEKPGRDPRPEFKTA-QFADGVETMNDLQPGMILEGAVTNV 661 EK V T+ + +EL PG DPR A V + +L+ G +L G V +V Sbjct: 761 LATEKLSCSVETLELLRQELLHPGLDPRASLPHAGLLRRDVCDVQNLRSGELLSGVVQSV 820 Query: 662 TNFGAFVDIGVHQDGLV 678 T FGAFVD G+H L+ Sbjct: 821 TMFGAFVDCGLHDSVLL 837 >UniRef50_Q7KZ85 Transcription elongation factor SPT6 n=17 Tax=Bilateria RepID=SPT6H_HUMAN Length = 1726 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 173/980 (17%), Positives = 313/980 (31%), Gaps = 237/980 (24%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYL 63 S + I + Q VPFIA YRKE L L + Sbjct: 354 STIQKIKEALGFMRNQ----------HFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKW 403 Query: 64 RELEERRQAILKSISEQGK--------------------LTDDLAKAINATLSKTELEDL 103 +L R++ + + + L + + S EL+D+ Sbjct: 404 TQLRIRKENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDV 463 Query: 104 YLPY------------------KPK-------------------------------RRTR 114 Y + + K RR Sbjct: 464 YNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDEEQRGPELKQASRRDM 523 Query: 115 GQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD-----------------KGVADTKA 157 I AGL+ LA P E Y + +A Sbjct: 524 YTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEA 583 Query: 158 ALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA----KFRDYFDHHE 213 L+GARY++ + A + + +R + A L T ++ + + ++ Sbjct: 584 VLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKGRKDVDEAHYAYSFKYLKNK 643 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP--KESYCEQIIMDHLGLRLNNAP- 270 P+ + + L + +EG+L ++ D + E ++Y E+I + ++ Sbjct: 644 PVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQ 703 Query: 271 -ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRAT 329 + R + + + + + EL + A++ I +R L++ L AP Sbjct: 704 EWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEYVIKACSRKLYNWLRVAPYRPDQQ 763 Query: 330 MGLDPGL--------------------RTGVKVAVVDATGKLVATDTIYPHTGQA----- 364 + D V A+V+ G++ + T + Sbjct: 764 VEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWRE 823 Query: 365 ------AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT-------AQ 411 A+ T+ +V + +R+ + DV++ ++ Sbjct: 824 EEREKKAQDIETLKKFLLNKKPHVVTVAG--ENRDAQMLIEDVKRIVHELDQGQQLSSIG 881 Query: 412 KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIG 466 +V A +Y S+ + EF D LR AVS+ARR+QDPL E ++ D + Sbjct: 882 VELVDNELAILYMNSKKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLK 941 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIV 521 Q V + +L L + VN VGVD+N A S L+ V GL +++ Sbjct: 942 FHPLQEHVVKEELLNALYCEFINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLL 1001 Query: 522 AWRDENG-QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPE 571 +N + ++R QL+ + +GPK F CAGFL+I+ LD S VHPE Sbjct: 1002 KILKQNNTRLESRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPE 1061 Query: 572 AYPVVERILAATQQAL------------KDLMGNSSELRNLKASDFTDE------KFGVP 613 Y ++ + ++++ N L++L F +E Sbjct: 1062 TYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHI 1121 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF---- 664 T+ DI EL +D R +++ + ET G ++ VT + + Sbjct: 1122 TLYDIRAELSCRYKDLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQG 1181 Query: 665 ---------------------------------------------GAFVDIGVHQDGLVH 679 G + G + Sbjct: 1182 ESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIP 1241 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERP 739 LS+K V+ P VK G V +++++D+++ LT R + N + + Sbjct: 1242 TKFLSDKVVKRPEERVKVGMTVHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYY 1301 Query: 740 QNNRPAAKPRGREAQPAGNS 759 + AA + E Sbjct: 1302 DFDAEAADHKQEEDMKRKQQ 1321 >UniRef50_C4QCZ5 Tex protein-relatedtranscription accessory protein (S1 rna binding domain) n=1 Tax=Schistosoma mansoni RepID=C4QCZ5_SCHMA Length = 873 Score = 474 bits (1221), Expect = e-132, Method: Composition-based stats. Identities = 198/686 (28%), Positives = 313/686 (45%), Gaps = 68/686 (9%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M +A V + + + G TVPFIARYRKEITGG + T L L+ +++ Sbjct: 1 MEIDLTTQVAEAANIDRNLVSRVIPMFENGYTVPFIARYRKEITGGAEPTVLHRLKEKMN 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKR-RTRGQIAIE 120 + L ++ + L+ + G LT++L++ + + +++ L P+K K RT A Sbjct: 61 DCKMLVDKIEKSLQFFDKSGLLTNELSQQLMKCKTTEDIKLLGNPFKSKGPRTLAGRAKA 120 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 LEP+A + + ++ + A K A D +I+ + FA+D ++ K Sbjct: 121 VNLEPIALDIL-HSNRCVDMYSLAPPEAKKTFTSKTALEDAVSHIIADIFAKDLDIIRKA 179 Query: 181 RDYLWKN-AHLVSTVVSG------------------------------------------ 197 + K A LV+ S Sbjct: 180 EELCSKYIATLVTAKKSKRGKKVEQSSGGNLPNSMSIDFDENENADDAECIQNSHSSMNN 239 Query: 198 -----KEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKES 252 K+++ F++Y + P+S++ +H+ LA+ R GV+ + ++ PQ Sbjct: 240 TNNNSKKDDLVTFKNYLNFSRPVSSILAHQVLAINRANERGVITVKIHLSPQVQHN---- 295 Query: 253 YCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFA 312 C + N D + + W+ + HL + + A+D ++ VF+ Sbjct: 296 -CATFVSQKYFPTTNRIHWD-FVMSAFNDAWKRLIDPHLVRSIRTKLTTSAQDASLEVFS 353 Query: 313 RNLHDLLMAAPAGLR-ATMGLDPGLRTGVKVAVVDATGKLVATDTIYP--HTGQAAKAAM 369 NL LLM AP R +GLDPG R G K A D G +++T ++P + Sbjct: 354 ENLRRLLMTAPLRDRLPVIGLDPGWRNGCKWAACDPHGNVLSTGILWPPHTLSAIPPKKL 413 Query: 370 TVAALCEKHNVELVAIGNGTASRETERFYLDVQK--QFPKVTAQKVIVSEAGASVYSASE 427 +V +N A+GNG SR+T + + + F + + +VSE GAS YSAS+ Sbjct: 414 SVQNGPMSNN----ALGNGQGSRQTGSWLAYLIQIQHFKPLNVRYAVVSECGASYYSASK 469 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 +A E PDLDVS RGAVSIARRLQDPLAELVK++PK +GVG YQHD+ QL + V+ Sbjct: 470 VACTELPDLDVSFRGAVSIARRLQDPLAELVKLEPKHLGVGMYQHDIPVNQLTSAVHNVM 529 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 E+C++ VGVDLN A + +L+RVAGL+ M A+ I+ +R + G F++R LLKV +G F Sbjct: 530 EECISFVGVDLNAAPLHILSRVAGLSEMKAKAILTYRSQVGPFRSRADLLKVKGIGQATF 589 Query: 548 EQCAGFLRI--NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 QCAGF+R+ + LD + E + D + + K Sbjct: 590 AQCAGFVRVKPTYSTTTLDGT-KDVEMISISSGDDNDGDDLTCDTQITNIFTGSTKRKHI 648 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRP 631 ++E I+ D Sbjct: 649 SNESNKKCKKGRIMDVAVTDQSDVNC 674 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 56/192 (29%), Positives = 85/192 (44%), Gaps = 34/192 (17%) Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGN----------SSELRNLKASDFTDEK 609 NPLD + VHP++Y V I++ Q L D+ SE R+ + F + Sbjct: 675 FNPLDQTAVHPDSYEVAANIISLLQLNLTDVGSMKMRTAATQFMISEDRDKRLEQFCSKT 734 Query: 610 FGVPTVTDIIKELEKP-GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 G+ T+ DI+ L +P D R + T F V ++DL+ GM ++G V NVT FGAF Sbjct: 735 VGLDTLRDILVALTRPLDFDERQDCFTPLFHSTVMKISDLRKGMQVKGRVENVTTFGAFC 794 Query: 669 DIGVHQDGLVH-----------------------ISSLSNKFVEDPHTVVKAGDIVKVKV 705 DIGV ++ + I + ++ GD +K V Sbjct: 795 DIGVEENAYIPRHEYPRNCSTSNLKIASETSTTGIGVSDGGDIHHKMFTLRLGDRIKATV 854 Query: 706 LEVDLQRKRIAL 717 VD++ KR+AL Sbjct: 855 SGVDIKYKRVAL 866 >UniRef50_Q8UVK2 Transcription elongation factor SPT6 n=26 Tax=Eumetazoa RepID=SPT6H_DANRE Length = 1726 Score = 473 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 161/971 (16%), Positives = 307/971 (31%), Gaps = 240/971 (24%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYL 63 S I + Q VPFIA YRKE L+ L + Sbjct: 342 STIAKIKEALNFMRNQ----------HFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKW 391 Query: 64 RELEERRQAILKSISEQGK--------------------LTDDLAKAINATLSKTELEDL 103 +L+ R+Q + + L + + S EL D+ Sbjct: 392 TQLKTRKQNLTRLFQRMQSYQFEQISADPDKPLADSTRPLDTADMERLKDVQSIDELGDV 451 Query: 104 YLPY----------------------------------------------------KPKR 111 Y + K Sbjct: 452 YNHFLLYYGRDIPKMQNAAKGGKKKLKKIKEVSEEDGEEAEVEEEEEEEEQKGPDLKQAS 511 Query: 112 R-TRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD-----------------KGVA 153 R I AGL+ LA P E Y + Sbjct: 512 RRDMYSICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFN 571 Query: 154 DTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA----KFRDYF 209 +A L+GARY++ + A + + +R + A + +++ + + Sbjct: 572 TPEAVLEGARYMVAMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDVDEAHFAYSFKY 631 Query: 210 DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP-KESYCEQIIMDHLGLRLNN 268 ++P+ + + L M EG+L + + D + ++Y ++I + ++ Sbjct: 632 LKNKPVKELSGDQFLKMCLAEEEGLLAIDICIDLVGVKGYGDQTYFDEIKQFYYRDEFSH 691 Query: 269 AP--ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGL 326 + R + + + + + EL + A+D + + L++ L AP Sbjct: 692 QVQEWNKQRTLAIERSLQQFLYPQMAKELKNKLIAEAKDNIVKSCCKKLYNWLKVAPYRP 751 Query: 327 R------------------ATMGLDP--GLRTGVKVAVVDATGKLVATDTIY-------- 358 +G+ G T V ++++ G++V + Sbjct: 752 DQQVEEDDDLMDESQGKGIRVLGVAFASGRDTPVFCSLINGEGEVVDFLRLPYFLKRRNA 811 Query: 359 ---PHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT------ 409 + + + +VA+ +R+ D+++ ++ Sbjct: 812 WREDEREKKQQDVENLKKFLLSKKPHVVAVSG--ENRDAHMVMEDIKRTISELEQNSSLP 869 Query: 410 -AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 +V A +Y S+ + +F D LR AVS+AR++QDPL E ++ D Sbjct: 870 VVGVELVDNELAVLYMNSKKSEADFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDDDIL 929 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQ 518 + + Q V + +L L + VN VGVD+N A + L+ + GL Sbjct: 930 CLKLHPLQEHVVKEELLSALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYICGLGPRKGS 989 Query: 519 NIVAWRDENG-QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTV 568 +++ +N + +NR QL+ + +GPK F CAGF++I+ LD S V Sbjct: 990 HLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRV 1049 Query: 569 HPEAYPVVERILAATQQAL------------KDLMGNSSELRNLKASDFTDE------KF 610 HPE Y ++ + ++++ N L++L F +E Sbjct: 1050 HPETYEWARKMAVDALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGN 1109 Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF- 664 T+ DI EL +D R ++ + ET G ++ VTN+ + Sbjct: 1110 KGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNMLTKETPETFYIGKLITCVVTNIAHRR 1169 Query: 665 ------------------------------------------------GAFVDIGVHQDG 676 G + G Sbjct: 1170 PQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMG 1229 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGN 736 + LS+K V+ P VK G V +++++D+++ + LT R + + N + + Sbjct: 1230 FIPTKFLSDKVVKHPEERVKPGMTVHCRIMKIDIEKFNVDLTCRTSDLSDKNNEWKLPKD 1289 Query: 737 ERPQNNRPAAK 747 + Sbjct: 1290 TYYDFDAETDD 1300 >UniRef50_UPI000180C965 PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae) n=1 Tax=Ciona intestinalis RepID=UPI000180C965 Length = 1609 Score = 462 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 155/956 (16%), Positives = 323/956 (33%), Gaps = 221/956 (23%) Query: 20 QVDAAVRLL-DEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYLRELEERRQAILKSI 77 ++ + + ++ PFI+ YRKE L+ L + ++ R+ ++ + + Sbjct: 299 KIQDTLNFMRNQQYEAPFISFYRKEYVEPELNIHDLFKIYHWDEKWTQMNVRKASVTRLM 358 Query: 78 SEQG--------------------KLTDDLAKAINATLSKTELEDLYLPY---------- 107 + LTD + + + E D+Y + Sbjct: 359 QKMQTFQYEQISADPDKPLGDNVRALTDADIERLQGIQTMEEYHDIYRHFLLHYGRDVPK 418 Query: 108 --------------------------------KPKRRTRGQIAIEAGLEPLADLLWSDPS 135 + RR + ++AG+ +A+ P Sbjct: 419 MQNALRIQRQRERAENGLNPDEDAPSLASDLKQASRRHMYTVCLDAGIGGVANKFGLTPE 478 Query: 136 HTPEVAAAQYVYAD-----------------KGVADTKAALDGARYILMERFAEDAALLA 178 E Y + + +A L+GARY++ + A + + Sbjct: 479 QFGENLRDNYQRHETEQYPAEPMDLAEDFLCPQFSTKEAVLEGARYMVAMQLAREPLVRQ 538 Query: 179 KVRDYLWKNAHLVSTVVSGKEEE----GAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGV 234 VR + A + ++E F + ++P+ + + L + E + Sbjct: 539 CVRQTFNERAKISVQPTKKGKKEIDEGHPCFSYKWLQNKPVKDLSGPQFLHIKNAETENL 598 Query: 235 LQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN--APADSWRKGVVSWTWRIKVLMHLE 292 + ++++ D ++Y E+I + ++ ++ R VV + + + + Sbjct: 599 VTMTIHIDMHGTVG-SQTYFEEIKQLYYRDEFSHLVQEWNNQRSKVVEFMLQNIIYPEMT 657 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPA---------------GLRATMGL--DPG 335 EL + + A++ A L L AP M + Sbjct: 658 KELKTLLYDEAKNGIKEHCALKLRSYLSVAPYQLEEREYDEDEEEERKGTVVMAIAYSEE 717 Query: 336 LRTGVKVAVVDATGKLVATDT-----------IYPHTGQAAKAAMTVAALCEKHNVELVA 384 + + AVV G++V I + + K +V Sbjct: 718 RDSAMFAAVVSGLGEVVDFLKLPNMRFRRKSHIEEEAKRKKSDMDQLKKFMSKRKPHVVV 777 Query: 385 IGNG-----TASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 IG T + ++ D++++ ++ +SVY++++ A +F D V Sbjct: 778 IGAEDRLATTIQEDVQQCVTDLEQEGVISNVAVELMDNELSSVYASTQRAQADFRDFPVE 837 Query: 440 LRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAV 494 LR A+S+ARRLQDP+ E ++ D + + Q +++ +L L V Sbjct: 838 LRQAISLARRLQDPMLEFSQLCTADQDLMCLKLHPLQDQLNKDELLEALVEEFVFRACEV 897 Query: 495 GVDLNTA-----SVPLLTRVAGLTRMM-AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFE 548 GVD+N A + ++ V GL A + + +NG+ +NR L+ V ++GPK F Sbjct: 898 GVDVNRAITHPHTATVVQFVCGLGPRKAAHLLKVLKQKNGRLENRSNLVTVCKMGPKIFI 957 Query: 549 QCAGFLRINHGD----------NPLDASTVHPEAYPVVERILAATQQALK---------- 588 CAGF++I+ LD VHPE Y ++ + + Sbjct: 958 NCAGFIKIDTKSIMEDSTDAYIEILDGLRVHPETYEWARKMAVDALEYDESAEDANPSSA 1017 Query: 589 --DLMGNSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 +++ + L++L F +E T+ DI EL +D R ++++ + Sbjct: 1018 LVEILESPERLKDLDLDAFAEELERQGYGNKGITLYDIRNELNSQYKDFRTPYRSSTAEE 1077 Query: 641 GV-----ETMNDLQPGMILEGAVTNVTNF------------------------------- 664 ET+++ + G ++ VT + + Sbjct: 1078 KFEMVTKETLSNFKEGKMITCRVTGIAHRRPKSEQLDQAEPHKDEETGMWNCSFCKTGGF 1137 Query: 665 --------------------GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 G V + G + LS+K V +P V G + + Sbjct: 1138 AELSEVWAHLDNGECLGRAVGVKVRLEGGITGFIPTDKLSDKPVSNPEERVHIGMTIHCR 1197 Query: 705 VLEVDLQRKRIALTMRLDEQ-----PGETNARRGGGNERPQNNRPAAKPRGREAQP 755 + ++D++R ++ LT R + + G E+ ++ + +++ Sbjct: 1198 ITKIDIERFQVDLTCRGSDLRDDAGSWKQQLDTYYGFEQETLDKKKLEDSNKKSNR 1253 >UniRef50_Q4SQL1 Chromosome 17 SCAF14532, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4SQL1_TETNG Length = 613 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 203/612 (33%), Positives = 291/612 (47%), Gaps = 92/612 (15%) Query: 196 SGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCE 255 K+++ KF+ YFD + + H+ LA+ RG + +L + +N + K + Sbjct: 1 KNKDKDIDKFQLYFDFTCNVQRIQPHQTLAINRGESLKILTVKVNIPDR----VKSDFSS 56 Query: 256 QIIMDHLGLRL-NNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARN 314 I ++ A K V +++ VL L + AE E+I +F RN Sbjct: 57 WCINSRWRPKIIPKAEHQLIIKNAVEDSYKRLVLPFLTRSYRTKLTAAAEKESIAMFVRN 116 Query: 315 LHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAAL 374 L L+ P MG+DPG + G KVA++ T +++ TD +Y H A + L Sbjct: 117 LRQRLLVGPVRGSVIMGVDPGYKHGCKVAILSPTSQILHTDIVYLHHSSQQSQADKLRHL 176 Query: 375 CEKHNVELVAIGNGTASRETERFYLDVQ--KQFPKVTAQK-------------------- 412 K++ + IGNGTA RETE ++ + + F + Sbjct: 177 IVKYSCTRIVIGNGTACRETEAYFSQLISRRLFHPLDVSYWTAQDYRHVALHQEASIDFE 236 Query: 413 ------------VIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI 460 I +EAGAS+YS S A +E P+LD +LR AVSIARR+QDPLAELVKI Sbjct: 237 TVRVHDLTILPLSITNEAGASIYSVSPEAVKEMPELDPNLRSAVSIARRVQDPLAELVKI 296 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNI 520 DPK IG+G YQHDVS + L LD VV++CV+ VGVD+N S L+ VAGL A++I Sbjct: 297 DPKHIGIGTYQHDVSSSALKAALDGVVQECVSFVGVDINMCSETLMRHVAGLNAGRARSI 356 Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH---------------------- 558 WR++NG F NR+QL V +GPK ++QCAGF+RIN Sbjct: 357 AEWREQNGPFINREQLKLVKGMGPKTYQQCAGFIRINPQTSVLFFFFVFSNSANSSLPQV 416 Query: 559 -------------------GDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 NPLD + +HPE+Y VV+R L+ + R Sbjct: 417 PENPAAKKGKGKACVKVSTSFNPLDQTCIHPESYHVVQRFLSIVGGRADPIGSPRLRQRV 476 Query: 600 LKASDFTDEK-------FGVPTVTDIIKELEK-PGRDPRPEFKTAQFADGVETMNDLQPG 651 + + T+ II L + PG D R F A F G+ +M+DL+ G Sbjct: 477 EDKVRSSSVEELARTADTSPETLKLIIDGLTQPPGFDIRQNFGQADFKQGIVSMSDLRVG 536 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV----EDPHTVVKAGDIVKVKVLE 707 +L G V N FGAFVDIGV + GL+H S+++ + + G+ V+V+VL Sbjct: 537 AVLTGRVDNTALFGAFVDIGVGRSGLIHKSNITPDKLPISQRRRSLALGPGERVEVRVLN 596 Query: 708 VDLQRKRIALTM 719 VD QR RI L + Sbjct: 597 VDHQRGRIGLDL 608 >UniRef50_C3YD45 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3YD45_BRAFL Length = 1823 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 148/805 (18%), Positives = 271/805 (33%), Gaps = 163/805 (20%) Query: 110 KRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYA-----------------DKGV 152 RR I AGL LA P E Y + Sbjct: 551 SRRDMYSICETAGLGGLAKKFGLTPEQFGENLRDNYQRHETDQYPAEPNDLSKEFVNSQF 610 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAK----FRDY 208 + L GAR+++ + + + + VR ++ A + + +E + + Sbjct: 611 PSEEKVLQGARHMVAMQLSREPLVRQCVRQTYFERAKVSTKPTKKGRKEIDEMHYGYTFK 670 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN 268 + ++P+ + + L M +EG+L+ ++ D + +SY E+I + ++ Sbjct: 671 YLKNKPVKDLTGDQFLKMSIAEDEGLLKTHVSIDGET----TQSYFEEIKQLYYRDEFSH 726 Query: 269 --APADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA-- 324 ++ R V+ + + +E EL + + ++D I R L++ L AP Sbjct: 727 LVQEWNTQRTMVLERMLKFILYPQMEKELRSKLVQESKDGIIKSCCRKLYNWLKVAPYQP 786 Query: 325 -----------------GLRATMGL--DPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA 365 MGL T AV+D G +V + H + Sbjct: 787 EQQIEEEDEYIEGMGSSKGLRVMGLAYSSDWDTASFAAVIDGEGDVVDFLRL-AHLMKRR 845 Query: 366 KA------------AMTVAALCEKHNVELVAIGNGTASRETERF-------YLDVQKQFP 406 A ++ L ++ IG +R+ + +++++ Sbjct: 846 NAYREADRENKLSDMESIKNLILNKKPHVIVIGA--ENRDAQSVIDDVKLCVKELEEEQQ 903 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----D 461 ++ + S A E D LR A+S+ARR+QDPL E ++ D Sbjct: 904 LAPIAVELLDNELSRFIMNSPRAEAEHRDYPPLLRQALSLARRMQDPLIEFSQLCVNNDD 963 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMM 516 + Q VS+ L L+ + VN VGVD+N + L V GL Sbjct: 964 LLCLRFHTLQEQVSREDLLHALELEFINRVNEVGVDINRCVANNHTTTLAQFVCGLGPRK 1023 Query: 517 AQNIVAWRDENG-QFQNRQQLLKVSRLGPKAFEQCAGFLRIN--------HGDNPLDAST 567 A I +N + +NR QL+ + +GPK F CAGF++I+ LD S Sbjct: 1024 AAYIQKVLKQNNARLENRNQLVMMCHMGPKVFMNCAGFIKIDTKSLGDSEQYIELLDGSR 1083 Query: 568 VHPEAYPVVERILAATQQAL------------KDLMGNSSELRNLKASDFTDE------K 609 VHPE Y ++ + ++++ L++L F +E Sbjct: 1084 VHPETYDWARKMAVDALEYDESAEDANPAAALEEILETPERLKDLDLDAFAEELERQGFG 1143 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF 664 T+ DI EL +D R F++ + ET G +++ VT + + Sbjct: 1144 NKSITLYDIRAELNSMYKDLRTPFRSPTVEEKFNMLTKETPETFYIGKLVQCRVTGIAHR 1203 Query: 665 ---------------------------------------------------GAFVDIGVH 673 GA + Sbjct: 1204 RPQGDQLDQANPVRSEETGLWRCPFCQKDTFPELSEVWNHFDSSECPGQATGAVTRLDNG 1263 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G + +S+K V+ P VK G V +++++D++R R+ L+ R + R Sbjct: 1264 VSGFIPTKMISDKHVKSPEERVKPGMEVYTRIIKIDIERFRVDLSCRSSDLADTNGDYRP 1323 Query: 734 GGNERPQNNRPAAKPRGREAQPAGN 758 + + + + Sbjct: 1324 ARDLYYDHETEETDRKADDEAKKKQ 1348 Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 23/114 (20%) Query: 17 RPEQVDAAVRLLDEGN-TVPFIARYRKEITGG-LDDTQLRNLETRLSYLRELEERRQAIL 74 ++ A+ + + VPFIA YRKE L+ L + +L R++ + Sbjct: 366 TVGKIRDALNFIRNQHFEVPFIAFYRKEYVEPELNINDLWRIWQWDEKWTQLRNRKRNMT 425 Query: 75 KSISEQG---------------------KLTDDLAKAINATLSKTELEDLYLPY 107 + + LT +N + EL D Y+ + Sbjct: 426 RLFEKMQTFQYEQVAANDPDAPLPENMRPLTQTDLDKLNEVQTMEELRDAYMHF 479 >UniRef50_D1IGV1 Whole genome shotgun sequence of line PN40024, scaffold_40.assembly12x (Fragment) n=8 Tax=Magnoliophyta RepID=D1IGV1_VITVI Length = 1646 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 148/898 (16%), Positives = 311/898 (34%), Gaps = 153/898 (17%) Query: 11 AGEIQARPEQVDAAVRLLD-EGNTVPFIARYRKEITGGL--DDTQL-------------- 53 ++ + + + L+ + VPFIA YRKE L D QL Sbjct: 332 GHDLSINKDDIMRFLDLVHVQKLDVPFIAMYRKEECLSLLKDPDQLEADDGNLDNPEKTP 391 Query: 54 --------RNLETRLSYLRELEERR-------------------------------QAIL 74 ++ L++R+ ++I+ Sbjct: 392 KLKWHKVLWAIQDLDRKWLLLQKRKSALQSYYNRRFEEESRRIYDETRLSLNQQLFESII 451 Query: 75 KSIS--EQGKLTDDLAKAINATLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLADLL- 130 KS+ E + DD N E+ YK PKR+++ I +AGL +A+ Sbjct: 452 KSLKAAESEREVDDADSKFNLHFPPGEVGVDEGQYKRPKRKSQYSICSKAGLWEVANKFG 511 Query: 131 -------------------WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFA 171 D PE A+ + A +A L GAR++ + Sbjct: 512 YSSEQFGLQISLEKMRMDELEDAKEPPEEMASNFTCAM--FETPQAVLKGARHMAAVEIS 569 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMF 227 + + VR NA + ++ F + + +P++ + L + Sbjct: 570 CEPCVRKHVRSIYMDNAVVSTSPTPDGNVVIDAFHQFAGVKWLREKPVTKFEDAQWLLIQ 629 Query: 228 RGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV 287 + E +LQ+++ + + D G+ + + RK ++ + Sbjct: 630 KAEEEKLLQVTIKLPELVLNKLISDSNDYYLSD--GVSKSAQLWNEQRKLILQDAIFGFL 687 Query: 288 LMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR------------ATMG--LD 333 L +E E + R+++ + + + L + + AP + M Sbjct: 688 LPSMEKEARSLLTSRSKNWLLLEYGKVLWNKVSVAPYQRKENDVSSDDEAALRVMACCWG 747 Query: 334 PGLRTGVKVAVVDATGKLVATDTI---------YPHTGQAAKAAMTVAALCEKHNVELVA 384 PG + ++D++G+++ + V H +V Sbjct: 748 PG-KPATSFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQQRVLKFMTDHQPHVVV 806 Query: 385 IG--NGTASRETERFYLDVQKQFPK---------VTAQKVIVSEAGASVYSASELAAQEF 433 +G N + ++ + Y + K + V E+ +Y + +++ + Sbjct: 807 LGAVNLSCNKLKDDIYEIIFKMVEENPRDVGHEMDGISVVYGDESLPHLYENTRISSDQL 866 Query: 434 PDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVE 488 P ++ AV++ R LQ+PLA + + + S + + ++ + ++ V+ Sbjct: 867 PGQSGIVKRAVALGRYLQNPLAMVSTLCGPGREILSWKLCSLEDFITPDEKYGMIEQVMV 926 Query: 489 DCVNAVGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 D N VG+D+N A+ L ++GL A ++ G R+ + + LG Sbjct: 927 DATNQVGLDINLAASHEWLFSPLQFISGLGPRKAASLQRSLVRAGTISTRRDFVVLHGLG 986 Query: 544 PKAFEQCAGFLRINHG---------DNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 K F AGFLR+ + LD + +HPE+Y + + + A++ + Sbjct: 987 KKVFLNAAGFLRVRRSGLAAASSQIIDLLDDTRIHPESYGLAQELAKD--MAIEHVRDRP 1044 Query: 595 SELRNLKASDFTDEKF---GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMN 646 + L+ L + +K T+ I EL + +D R +++ + ET + Sbjct: 1045 NRLKALDVDQYAKDKKLENKRETLYAIKMELIQGFQDWRRQYEEPTQDEEFYMVTGETED 1104 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF--VEDPHTVVKAGDIVKVK 704 L G I++ + V A + G++ S+ + + D + GD++ K Sbjct: 1105 TLAEGRIVQATIRKVQAQRAICMLESGLTGMLAKEDYSDDWRDISDLSDSMHEGDMLTCK 1164 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMM 762 + + R ++ L + E + + +R + + +A+ A Sbjct: 1165 IKTIQKNRFQVFLVCKESEMRSNRYQNAPNLDPYYREDRSSLQSEQEKARKEKELAKK 1222 >UniRef50_Q9N4L5 Putative uncharacterized protein n=1 Tax=Caenorhabditis elegans RepID=Q9N4L5_CAEEL Length = 745 Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 186/761 (24%), Positives = 329/761 (43%), Gaps = 73/761 (9%) Query: 1 MMNDSFCRIIAGEIQ-ARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 ++ I E+ Q V L G +IARYR ++ G L ++R Sbjct: 12 ILQFPIEYFIHKEVHELNSTQAQRLVSLFKNGCETAYIARYRGDVHGYLAPEKIRKAMEA 71 Query: 60 LSYLRELEERRQAILKSISE-----QGKLTDDLAKAINATLSKTELEDLYLPYKP-KRRT 113 + L + + + +++ Q K+ + + E+ D+ Y R+T Sbjct: 72 YVDAKNLNNKVSSAISTVTAKVAGAQEKII--VTERFKRCEEFDEVTDISKEYSTGTRKT 129 Query: 114 RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAED 173 + IA GLEP A + + + + K V D + L L+ R E Sbjct: 130 KANIARALGLEPPAQSILDGNFVDFKSLLSNGL---KTVKDVEEHLKICLADLINRDEEV 186 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEE---------GAKFRDYFDHHEPLSTVPSHRAL 224 + A + D L K + + + E+ K++++ + H Sbjct: 187 RKVSANI-DILKKECRVSAKLSREAEKNRKDLEKRGIIEKYKNFIGEKWNAEDIRDHTVS 245 Query: 225 AMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWR 284 A+ +G +EG++ + + + + + ++ + ++++ + Sbjct: 246 ALNKGFDEGIITWKIEC----------EFNDAKYIHPFSRKSVYFGMKNFYQEALAYSIK 295 Query: 285 IKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAV 344 + +E ++ ++++A+D +I +F N+ LL + + LDPG R+ +K A Sbjct: 296 NYFIPRIERKMANHLKDKAKDRSIVLFGENVDQLLSQEGIRDKFVIALDPG-RSKIKTAF 354 Query: 345 VDATGKLVATDTIYPHTGQAAKAAMTVAALCEK---HNVELVAIGNGTASRETERFYLDV 401 + TG++V + + + + + + + AIGNGT + T+ D+ Sbjct: 355 LKPTGEVVDMSSFSIYGTRFDGGGVDLLKKWSQQTERKDIVFAIGNGTNTYNTQIAVSDM 414 Query: 402 QKQF---PKVTAQKVIVSEAGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQDPLAEL 457 ++ IV E GAS YS + A +EF + +++ AVSI RRL DP++E Sbjct: 415 INSNVFPKEINVSYCIVPEHGASKYSCTPSAIEEFGENAEITEISAVSIGRRLIDPMSEY 474 Query: 458 VKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMA 517 VKI+P+ +G GQYQ V +L L VV D V+ GVDLNTAS LL R+ GL A Sbjct: 475 VKIEPQHLGKGQYQLSVDPKKLNESLLNVVRDRVSFNGVDLNTASKNLLQRINGLNEKTA 534 Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD----------------- 560 + IV +R++NG+F++R +L +V +G F+QCAGFL ++ D Sbjct: 535 KEIVQYREQNGRFRSRAELKEVKGIGALTFQQCAGFLTVSRPDDAEDGPPKKKFKKSSTS 594 Query: 561 ---NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 NP D + VHP+ Y E +L +++D+ G +++ S T E+ V + Sbjct: 595 KEWNPFDETIVHPDDYRTGESLLGKLNVSIEDITG---RIKSFSISRLTAEEAKVLNLLQ 651 Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 L+ + P V + DL G G V+N T+FG F+DIGV QDGL Sbjct: 652 -NLTLKTKMKPP------PPLRTKVGQIRDLAEGQRFTGTVSNKTDFGVFIDIGVGQDGL 704 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 HIS + + D V+V + ++ + +I+L+ Sbjct: 705 AHISHFKDGHYS--LMLPSVNDSVEVVIDKI-REDGKISLS 742 >UniRef50_UPI00015B5616 PREDICTED: similar to suppressor of ty n=1 Tax=Nasonia vitripennis RepID=UPI00015B5616 Length = 1341 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 162/842 (19%), Positives = 304/842 (36%), Gaps = 137/842 (16%) Query: 29 DEGNTVPFIARYRKEIT-GGLDDTQLRNLETRLSYLRELEERRQAILKSISEQ------- 80 +E VPFI+ YRKE LD L + + ++ +R+QA+L + Sbjct: 233 NEYLEVPFISHYRKEYVLPELDIEDLWKVYKFDAKWCQMVQRKQALLALFRKLKRYQKDS 292 Query: 81 ---GKLT---DDLAKAINATLSKTELEDLYLPY---------------------KP---- 109 K+ ++ K + + EL D Y + KP Sbjct: 293 PSSEKVILDKEEHEKQLEIAQTAEELNDCYEHFMLYHADEILEMQEIELKQEKGKPEEKL 352 Query: 110 ----KRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYV-----------------YA 148 +R + I AGLE LA P + + +Y Y Sbjct: 353 KRAVRRSGQYSIYKRAGLENLAKRFGLRPEQFSKNVSEEYQIFEVEQDPNEPGTIAAEYV 412 Query: 149 DKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEE----EGAK 204 K L ++++ + A + L VR + A + + Sbjct: 413 GKNFKSADEVLKAVQHMVAIQLAREPLLRKSVRATFKRKAKISVRPTKQGIKSIDGNHPI 472 Query: 205 FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL 264 + + +P++ + + L + + ++ +S + + D ++Y EQ+ ++ Sbjct: 473 YSMKYLKDKPVADLVGDQFLKLAMAEADKLIVISFSDTIEGDTS--KNYVEQMKQLYVKD 530 Query: 265 RLNNAP--ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 + + ++ R G V VL L+ EL T+ A++ + R H+ + A Sbjct: 531 EFSKSVREWNALRVGSVEIALEKIVLPDLKKELHSTLLSEAKECVMRSCVRKAHNWIKVA 590 Query: 323 PA-----------------GLRATMGLD--PGLRTGVKVAVVDATGKLVAT--------- 354 P MG+ P +V+ G+ Sbjct: 591 PYACDLFSQKTDDDKRDASEGLRVMGVAYVPDFSIAAYACLVEPKGECTDYVKLPHLLKR 650 Query: 355 DTIYPHTGQAAKAAM--TVAALCEKHNVELVAIGNGTASR-----ETERFYLDVQKQFPK 407 IY + ++AK A + +V IG + E + + Sbjct: 651 KNIYRNLERSAKEADLAAIKNFIAGRRPHVVVIGGESKDALLIADEIRECIAALVAEKRC 710 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DP 462 + I+ A +++ S A EF D + LR A+S+ARRLQDPL E ++ + Sbjct: 711 PAIKVEIMDNHLAVIFANSLQARSEFRDYPLELRQAISLARRLQDPLVEFSQLCNSENEI 770 Query: 463 KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN-----TASVPLLTRVAGLTRMMA 517 + Q +++ +L + + + VN VGVD+N LL V GL A Sbjct: 771 LCLKYHDLQDQLAKEELLQSIQLEFVNRVNEVGVDINKIIQQHHGENLLQYVCGLGERKA 830 Query: 518 QNIVAW--RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDAS 566 Q ++ EN +NR QL+ +GPK F C GF++I+ LD S Sbjct: 831 QTLIRIVKHKENKCLENRSQLVTACHMGPKVFTNCVGFIKIDTDSLADSTEDYVEELDGS 890 Query: 567 TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 VHPEAY ++ A +++ + + + + T+ DI +EL+ Sbjct: 891 RVHPEAYEFARKMAADARRSSRRIEDLDLGAYSKELEK-QGFGSKHITLRDIGRELDAGY 949 Query: 627 RDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF-------GAFVDIGVHQ 674 +D R +++ ET G ++E VT ++ G + + Sbjct: 950 KDARSPYRSPDPDKLFNMLTKETPESFHIGKLVEATVTGISYNKARGTAAGVQLRLDNGI 1009 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 G +H +LS+++ +P V+ G ++ ++ +++ R + T + ++ E + R Sbjct: 1010 RGFIHKRNLSDEYATNPEEGVRVGGRIRCRITKIEAHRFSVEATSKSNDLADEGHRWRPR 1069 Query: 735 GN 736 + Sbjct: 1070 KD 1071 >UniRef50_B7Z6X7 cDNA FLJ57207 n=11 Tax=Euteleostomi RepID=B7Z6X7_HUMAN Length = 514 Score = 426 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 191/510 (37%), Positives = 267/510 (52%), Gaps = 64/510 (12%) Query: 273 SWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGL 332 ++ +++ + L E + AE E++ +F RNL LL+ +P R MG+ Sbjct: 2 KILYNSLNDSFKRLIYPLLCREFRAKLTSDAEKESVMMFGRNLRQLLLTSPVPGRTLMGV 61 Query: 333 DPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR 392 DPG + G K+A++ T +++ TD +Y H GQ + A + L N V IGNGTA R Sbjct: 62 DPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREAEKIKTLLLNFNCSTVVIGNGTACR 121 Query: 393 ETERFYLDVQ--KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL 450 ETE ++ D+ F + IVSEAGAS+YS S A +E P LD +LR AVSIARR+ Sbjct: 122 ETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKEMPGLDPNLRSAVSIARRV 181 Query: 451 QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA 510 QDPLAELVKI+PK IGVG YQHDVSQT L LD+VVE+CV+ VGVD+N S LL +A Sbjct: 182 QDPLAELVKIEPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVDINICSEVLLRHIA 241 Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------- 560 GL A+NI+ WR++NG F NR+QL KV LGPK+F+QCAGF+RIN Sbjct: 242 GLNANRAKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFIRINQDYIRTFCSQQTE 301 Query: 561 --------------------------------------NPLDASTVHPEAYPVVERILAA 582 NPLD + +HPE+Y + R L++ Sbjct: 302 TSGQIQGVAVTSSADVEVTNEKQGKKKSKTAVNVLLKPNPLDQTCIHPESYDIAMRFLSS 361 Query: 583 TQQALKDLMGNSSELRNLKASDFTD--------EKFGVPTVTDIIKELEKPGR-DPRPEF 633 L +G + + + + + V T+ II L +P D R +F Sbjct: 362 IGGTL-YEVGKPEMQQKINSFLEKEGMEKIAERLQTTVHTLQVIIDGLSQPESFDFRTDF 420 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 F + + DLQ G +L G V N T FG FVDIGV + GL+ I +++ + Sbjct: 421 DKPDFKRSIVCLEDLQIGTVLTGKVENATLFGIFVDIGVGKSGLIPIRNVTEAKLSKTKK 480 Query: 694 V----VKAGDIVKVKVLEVDLQRKRIALTM 719 + G+ V+V+VL +D+ R RI L + Sbjct: 481 RRSLGLGPGERVEVQVLNIDIPRSRITLDL 510 >UniRef50_UPI0001692A0D RNA binding S1 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI0001692A0D Length = 446 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 152/412 (36%), Positives = 228/412 (55%), Gaps = 15/412 (3%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLR 64 + I+ E+ P +V A LLDEGNT+PFIARYRKE+TG +D+ QLR++E RL YLR Sbjct: 47 RIQKQISTELALTPGKVKTATALLDEGNTIPFIARYRKEMTGEMDENQLRSIEERLQYLR 106 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLE 124 LE+R+ +++ I EQGKLT +L AI + ++EDLY PY+ KR+TR +A E GLE Sbjct: 107 NLEDRKLEVIRLIDEQGKLTAELHSAIEQAVKLQDVEDLYRPYRQKRKTRASVAKERGLE 166 Query: 125 PLADLLWSDPSH-TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDY 183 PLA + P + A +Y+ DKG+ A+ GA I+ E A++A + A VR Y Sbjct: 167 PLAGWMLKQPKQGSLAEEAEKYINEDKGILSAADAVQGAMDIIAENIADNAKVRAWVRKY 226 Query: 184 LWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADP 243 + ++E + + Y+ + EP+ +P HR LA+ RG EG L+++L P Sbjct: 227 TRDEGIFRTEAKDAEQE--SVYEMYYAYDEPVKRMPPHRILAINRGEREGFLKVNLEVAP 284 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 L + + + VV ++ + +E E+ G + ERA Sbjct: 285 DRIHQYMGR----------QLIQGPSVVQNELEEVVQDAYKRLISPSIEREVRGEMTERA 334 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTG- 362 E+ AI +FA NL +LL+ P + +G+DP RTG K+AVVD TGK++ YP Sbjct: 335 EEHAITIFAANLRNLLLQPPVRGKTVLGVDPAFRTGCKLAVVDETGKMLEIAVSYPTPPY 394 Query: 363 -QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV 413 + +A + L ++H VEL+ IGNGTASRETE+F D+ ++ + Q + Sbjct: 395 SKVEEAKTILKQLIQRHGVELIVIGNGTASRETEQFVADLIREMKEANLQYL 446 >UniRef50_Q09915 Transcription elongation factor spt6 n=1 Tax=Schizosaccharomyces pombe RepID=SPT6_SCHPO Length = 1365 Score = 422 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 161/857 (18%), Positives = 296/857 (34%), Gaps = 125/857 (14%) Query: 18 PEQVDAAVRLL-DEGNTVPFIARYRKEITGG-----------LDDTQLRNLETRLSYLRE 65 V V + VPFI ++R++ L L N+ + Sbjct: 316 QTAVRYVVHFFIRDSLEVPFIWQHRRDYIVHNNRERNTITPLLSQNDLWNIFFLCTKFWS 375 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPY---------------- 107 L ++Q ILK S+ G D + A S ++DL Y+ + Sbjct: 376 LHSKKQDILKLYSDLGINDDLVVPFCEAASSLDAIDDLNDYIHFTYSEQIRDRALLMGTG 435 Query: 108 -------------KPKRRTRGQIAIEAGL----------EPLADLLWSDPSHTPEVAAAQ 144 K ++ + + E G+ + D + +PE + Sbjct: 436 LRRPQGSKYSFFEKFRKSSLYNLVKEFGMSAKDFSFNVAQGARLRFVEDNTLSPEELSRT 495 Query: 145 YVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE----E 200 YV + ++ + L AR +L E D RD L+ + Sbjct: 496 YVTNE--LSSPEQVLQKARRVLAEEIIHDPQFRKSFRDKLYNAGVVTVLATQKGVRKIGS 553 Query: 201 EGAKFRDYFDHHEPLS--TVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQII 258 E + + +PL + L M + EG++QLS+ + + + E + Sbjct: 554 EHPYYEFKYLKRKPLGSFELEPILFLKMLKAEEEGLIQLSIEF--EDPDDVFKGLLELFV 611 Query: 259 MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDL 318 D+ N ++ R+ V+ ++ + + T+R R DE L Sbjct: 612 SDNFSE--NAMQWNAQRELVLKEVFKRFSALA-PDAIRETLRSRYLDELGMRCRNQLFSR 668 Query: 319 LMAAPAGLRA----------TMGLDPGL---RTGVKVAVVDATGKLVATDTIYPHTGQAA 365 L AP + + G + VD G+ + + A Sbjct: 669 LDQAPYEPSTKNFDRGTIPSVLAVSNGKGESSDAIICVFVDDVGEPTDSLKLADLRDLAN 728 Query: 366 KAAMTVAALCEKHNVELVAIGNGTASRETER-FYLDVQKQFPKVTAQKVIVSEAGASVYS 424 +A A EK +++ + + S R D V ++V++ A +Y Sbjct: 729 QAM--FAEFVEKVKPDVIGVSGMSVSAHKIRQHVQDSLTSHEPVDL--IMVNDEVARLYQ 784 Query: 425 ASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARK 482 S A EFP L V++AR +Q+PL E + D S+ +QH + L + Sbjct: 785 NSTRAVDEFPTLPTISCYCVALARYVQNPLFEYAAMGRDLMSLSFDPWQHLLPPDVLWKY 844 Query: 483 LDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQN-IVAWRDENGQFQNRQQL 536 L+ + D + VG+D+N A +L +AGL A + G+ NR L Sbjct: 845 LETALVDISSLVGIDINEAVTNKYEANILPYIAGLGPRKADYVLKKIAATGGRIDNRSDL 904 Query: 537 LKVSRLGPKAFEQCAGFLRINHG----DNPLDASTVHPEAYPVVERILAATQQALKD--- 589 + + K F C+ F I + + LD++ +H E Y + ++ + + ++ Sbjct: 905 ISKQIMSRKVFINCSSFFIIPNDEYPNMDILDSTRIHNEDYELARKMASDALELDEEDIE 964 Query: 590 -------------LMGNSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPR 630 + +L L ++ D+ + T+ I EL+ P + R Sbjct: 965 ELETNRGVVYHLLEENETGKLDELVLEEYADQLEREFHQKKRNTLEKIRLELKDPYGEQR 1024 Query: 631 PEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 F ++ E +LQ I+ V VTN V + DG + +S+ Sbjct: 1025 NVFHKLTPSEIFLMLTGENPEELQADAIVPVNVRRVTNRFVAVKLDCGIDGNIKADEVSD 1084 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPA 745 F+ P +++ G V+ ++ +D + L++R N++R + R Sbjct: 1085 DFIP-PPQLLQVGQTVEGVIISLDEANFMVDLSLRNS-VLQSANSKRQTSSHRTSYWDTE 1142 Query: 746 AKPRGREAQPAGNSAMM 762 A+ R E A A Sbjct: 1143 AEKRDTERMQAETQAEQ 1159 >UniRef50_A8WJL4 Putative uncharacterized protein n=2 Tax=root RepID=A8WJL4_CAEBR Length = 809 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 192/824 (23%), Positives = 341/824 (41%), Gaps = 115/824 (13%) Query: 1 MMNDSFCRIIAGEIQ-ARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETR 59 ++N + E++ + + L EG +IARYR+++ GGL ++R + Sbjct: 12 ILNKPIEDFVLKEVRELTFNRARGLIALFKEGCETAYIARYREDVHGGLSPEKIRKAKDT 71 Query: 60 LSYLRELEERRQAILKSISEQGKLTD-----DLAKAINATLSKTELEDLYLPYKP-KRRT 113 L + + + +I+ GKLT + + + E+ D+ + P R+T Sbjct: 72 YLAAVHLNSKVASSITTIT--GKLTGLDEKRAVTERLKGCDDMEEVSDITKEFAPGSRKT 129 Query: 114 RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAED 173 + IA GLE A + + K V D + + ++ + +D Sbjct: 130 KANIARGLGLEGPALKVLNGEFVDFCSLIT---REMKTVRDVEENMKA---LVADLINKD 183 Query: 174 AALLAKVRDYLWKNAHLVSTVVSGKEEEGAK-------------FRDYFDHHEPLSTVPS 220 + + ++ TV S E K +R+ + S Sbjct: 184 EEVRKIALKIVKLQTNVRMTVTSKLTREVEKKIETEAVKKVRERYREVIGLTRTAYHIMS 243 Query: 221 HRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVS 280 H A+ RG EGV+ + +P M + + ++ + Sbjct: 244 HTVSALNRGSEEGVIAWKVELNPSDV----------TKMHPFQKKTVHRNMQNFFQSAYF 293 Query: 281 WTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGV 340 ++ + LE + + + +E+ +I VF RN+ + + + LDPG + V Sbjct: 294 YSINTYTVPMLERGVKRFLSKSSEERSITVFGRNVEQMFSQKGVHSKYVIALDPG--SIV 351 Query: 341 KVAVVDATGKLVATDTIYP--HTGQAAKAAMTVAALCEKHNVE---LVAIGNGTASRETE 395 K A ++ GK++ D + + K + +VA+GNG+ + T+ Sbjct: 352 KAAFLEPNGKVIDMDQFSFSFRAPTFDSRGIEILKNWAKQTMGKDIVVAVGNGSNTYGTQ 411 Query: 396 RFYLDVQKQF---PKVTAQKVIVSEAGASVYSASELAAQEF-PDLDVSLRGAVSIARRLQ 451 + + ++ +V E GAS YS ++ A +EF D+D+ L AVSI RRL Sbjct: 412 TAVSTMIQNEAFPKEIDVCFCVVPEHGASKYSCTDAAREEFGEDVDIKLISAVSIGRRLI 471 Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DP++E VKI+P+ +G GQYQ +++ L KL VV D V+ +GVDLN AS LL + G Sbjct: 472 DPMSEYVKIEPQHLGKGQYQLSINEKSLKGKLVDVVRDRVSLIGVDLNLASEALLRNICG 531 Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN---------- 561 L A IV +R + G+F++R +L KV +G +F+QC+GFL ++ D Sbjct: 532 LNSTTAAEIVKYRMQKGRFKSRAELKKVKGIGDVSFQQCSGFLTVSRPDELDQPAKKRFK 591 Query: 562 ---------PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 PLD +TVHP+ Y + ++++ ++ ++ + ++ ++ T E+ + Sbjct: 592 TPDGVAGWSPLDTTTVHPDHYGIALKLISKLNLTVEQIVSGA----DISFTNLTPEEEEI 647 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQ-----FADGVETMNDLQPGMILEGAVTN------- 660 + +L+ P F + +L+ + G VTN Sbjct: 648 IKLLRDKPDLKPPPVMMVLAVSIPLNTCFFFQKKCRALKNLRVNEVFLGTVTNTVSSFSE 707 Query: 661 ----VTNFGAFVDIGVHQDGLVHISSL-------------------SNKFVE------DP 691 +T+FG FVDIGV +DGLVHIS+ SN FV D Sbjct: 708 AYLTITDFGVFVDIGVEKDGLVHISNYRKNNEQPKTKSSNNKNAPKSNTFVNKNDPEADF 767 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 V GD ++V + + + RI+L + +P ++ G Sbjct: 768 KNVPSVGDQIEVIIQGI--KGDRISLVPIKEPKPQSSSFASGSR 809 >UniRef50_B7Q0Q9 S1 RNA binding domain-containing protein, putative n=1 Tax=Ixodes scapularis RepID=B7Q0Q9_IXOSC Length = 1420 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 138/678 (20%), Positives = 258/678 (38%), Gaps = 100/678 (14%) Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRD 207 + AL GARY++ + + D + +R+ ++ A + T +E + Sbjct: 372 FPTAEEALKGARYMVAVQISMDPLVRRCIRETFFERAKICVTPSKKGLKEIDENHPCYPI 431 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 + ++P+ + + L M + EG+L+ S+ D P SY ++I + + Sbjct: 432 KYLKNKPVRDLEGEQFLHMSQAEGEGLLKTSIVMDSDSRSHPG-SYLDEIKQLYYRDEFS 490 Query: 268 N--APADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 N ++ R +S+ + E EL + A+D + R L++ L AP Sbjct: 491 NNVQEWNNQRCEALSYALSKLLYPAFEKELKVQLLLEAQDGIVKACCRKLYNWLKVAPYQ 550 Query: 326 LRATMGLDPGLRT-----------------GVKVAVVDATGKLVATDTIYPHTGQAAKAA 368 + M D T A++D TG+++ + PH + + Sbjct: 551 VDPQMEEDEDFDTRDGIRVFAIAYENDWEVPAFGALIDGTGEVMEHLRL-PHLLKRKNSW 609 Query: 369 MT------------VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVT------- 409 + ++ +G SRE + D++ + Sbjct: 610 KEKERELKEHDMRVLRKFILNKKPHVICVGAQ--SREALQIVEDIKAVVTDLAENEQMPL 667 Query: 410 AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKS 464 ++ A VY S+ A +F D + LR A+S+ARR+QDPL E ++ + Sbjct: 668 INVELLDNDLAIVYMNSKKAESDFRDYPLLLRQAISLARRMQDPLVEFSQLCTPDEEIFC 727 Query: 465 IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVP-----LLTRVAGLTRMMA-Q 518 + Q V +T L+ + N VGVD+N A L+ + GL Sbjct: 728 LKYHPLQDSVPRTDFTNGLNLEFVNRTNEVGVDINLAIAHTHTSYLVQFLCGLGPRKGYA 787 Query: 519 NIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVH 569 + + + + ++R QL+ V +GPK F CAGF++I+ LD S VH Sbjct: 788 LLKTLKQSHQRLESRTQLVTVCHMGPKVFINCAGFIKIDTTSFENSTNAYVEVLDGSRVH 847 Query: 570 PEAYPVVERILAATQQAL------------KDLMGNSSELRNLKASD---FTDEKFGVPT 614 PEAY ++ + ++++ N +LR + T + G+ Sbjct: 848 PEAYEWARKMAVDALEYDDVTEDVNPAEALEEILENPEKLRPMFLRAGKMVTCQVVGIAR 907 Query: 615 VTDIIKELEK--PGRDPR------PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGA 666 ++L++ P R+ P F + E N G ++ G Sbjct: 908 RKPHGQQLDQANPIRNDETGLWQCPFCLKNDFPELSEVWNHFDAGSCPGQSM------GV 961 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--- 723 V + +G +HI +S+K V +P V+ G I+ +++++D++R + LT R + Sbjct: 962 RVRLDNGVNGFIHIRFISDKKVTNPEERVRPGMILHCRIIKIDIERFAVDLTCRSSDLAD 1021 Query: 724 --QPGETNARRGGGNERP 739 + NE P Sbjct: 1022 VNNEWSVTLSQSSTNEEP 1039 >UniRef50_C5KAX6 Tex protein-relatedtranscription accessory protein, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAX6_9ALVE Length = 1632 Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 186/626 (29%), Positives = 268/626 (42%), Gaps = 65/626 (10%) Query: 109 PKRRTRGQIAIEAGLEPLADLLWSDPSH---------TPEVAAAQYVYADKGVADTKAAL 159 KR+T+ Q AI+AG P AD++ S T ++ V A + D +AA Sbjct: 8 TKRKTKAQAAIDAGFGPAADVILSAAGQASPGGCLMRTDQLRRQAQVAASEEETDVEAA- 66 Query: 160 DGARYILMERFAEDAALLAKVRDYLWKNAHLVST------------VVSGKEEEGAKFRD 207 IL R A D + + R L A L + ++ ++ Sbjct: 67 --VVAILTYRLAHDQEVRSICRSMLASRARLEVKGIVKRTSTPKGKIKVKPKQPKQQYSS 124 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 Y L V H LA+ RG L++ + + +L Sbjct: 125 YGGLKRRLDRVKPHEWLAIKRGEAAKELRVKIVFPATT------QLYGCLQERYLASGHG 178 Query: 268 NAPADSWRKGVVSWTWRIKVLMHLETELMGT-VRERAEDEAINVFARNLHDLLMAAPA-- 324 V+ T + L E + AED AI F N+ LM P Sbjct: 179 TCLCAKMIPTVIRRTVDT-IEKSLAREFRSERLTVPAEDFAIKTFTDNVSVKLMCPPIRV 237 Query: 325 -GLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAA----------------KA 367 +G+DPG G K V+ ATG+++ + G A Sbjct: 238 EKDATVVGVDPGYVNGHKCVVISATGEVLDMFKFWTRPGGARWGPEITCIVWIAGSSALG 297 Query: 368 AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASE 427 + + LV +G+G S E V P + +V E GAS+YSA Sbjct: 298 PEQLVQKVSQWTCSLVVVGDGQGSAEAVESIRRVLP--PHMNVGICVVDECGASIYSAGA 355 Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVV 487 +AA E PD+D+S RGAVSIARR+ DP+AE VK++PK+IGVG +QHD+ QL L + Sbjct: 356 VAAAELPDMDISFRGAVSIARRVLDPIAEYVKLEPKNIGVGLFQHDMPPKQLDSALTQAI 415 Query: 488 EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAF 547 + CV VGVDLNTASV LL VAGL A+ IV +R NG+F R++L KV +G F Sbjct: 416 QWCVCQVGVDLNTASVQLLRYVAGLNAGTAKRIVEYRTSNGRFTCREELKKVKGIGAAVF 475 Query: 548 EQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTD 607 +Q AGF+R+ G PLD++ +HPE+Y ++ + G+ S D Sbjct: 476 QQAAGFIRVYDGSEPLDSTGIHPESYDCARQLKRLIE--THRGEGSDLNSLLQHVSCEED 533 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM--------NDLQPGMILEGAVT 659 + T +++ EL RD R E +E +L+ G LEG+V Sbjct: 534 SEQARTTSAEVLTELVGSDRDVRLEHPERYRPPEIEYPPYRSGCGITELEVGAHLEGSVK 593 Query: 660 NVTNFGAFVDIGV--HQDGLVHISSL 683 NV +FGAFV + GL+H+S+L Sbjct: 594 NVVSFGAFVHLDCAESVTGLIHVSNL 619 >UniRef50_O80815 T8F5.22 protein n=8 Tax=Magnoliophyta RepID=O80815_ARATH Length = 1684 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 151/834 (18%), Positives = 303/834 (36%), Gaps = 130/834 (15%) Query: 36 FIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS--EQGKLTDDLAKAINA 93 + RY +E D+T+L YL ++++KS+ E + DD+ N Sbjct: 457 YTKRYEEESRRVYDETRL----NLNQYLF------ESVIKSLKVAETEREVDDVDSKFNL 506 Query: 94 TLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLADLL-------------------WSD 133 E+ YK PKR+++ I +AGL +A+ D Sbjct: 507 HFPPGEIGVDEGQYKRPKRKSQYSICSKAGLWEVANKFGYSAEQLGLALSLEKLVDELED 566 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVST 193 TPE A +V A ++ A L GAR++ + + ++ VR +NA + ++ Sbjct: 567 AKETPEEMAKNFVCAM--FENSLAVLKGARHMAAVEISCEPSVKKYVRGIYMENAVVSTS 624 Query: 194 VVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPP 249 + F + + +PLS + L + +G E +LQ++ + Sbjct: 625 PTADGNTVIDSFHQFSGIKWLREKPLSKFEGAQWLLIQKGEEEKLLQVTFKLPENYMNRL 684 Query: 250 KESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAIN 309 E + +G+ + RK ++ +L +E E + RA+ ++ Sbjct: 685 ISDCNEHYLS--VGVSKYAQLWNEQRKLILEDALHAFLLPSMEKEARSLLTSRAKSRLLS 742 Query: 310 VFARNLHDLLMAAPAGLR------------ATMG--LDPGLRTGVKVAVVDATGKLVATD 355 + + L + + A P + M PG ++D++G+++ Sbjct: 743 EYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMACCWGPGKPPNTF-VMLDSSGEVLDVL 801 Query: 356 TIYPHTGQAAK---------AAMTVAALCEKHNVELVAIG--NGTASRETERFYLDVQKQ 404 T ++ V H +VA+G N + +R + Y + + Sbjct: 802 YAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPHVVALGAVNLSCTRLKDDIYEVIFQM 861 Query: 405 FPKV---------TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLA 455 + V V E+ +Y S ++ ++ P ++R AV++ R LQ+PLA Sbjct: 862 VEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISGEQLPQQSGNVRRAVALGRYLQNPLA 921 Query: 456 ELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA 510 + + + S + ++ + + ++ V+ D N ++ Sbjct: 922 MVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQVMVDITN--------------QFIS 967 Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG---------DN 561 GL A ++ G R+ L+ + LG K F AGFLRI + Sbjct: 968 GLGPRKAASLQRSLVRAGSIFVRKDLI-MHGLGKKVFVNAAGFLRIRRSGLAASSSQFID 1026 Query: 562 PLDASTVHPEAYPVVERILAA----------------TQQALKDLMGNSSELRNLKASDF 605 LD + +HPE+Y + + + + A++ + + LR + ++ Sbjct: 1027 LLDDTRIHPESYSLAQELAKDIYDEDVRGDSNDDEDAIEMAIEHVRDRPASLRKVVLDEY 1086 Query: 606 TDEKF---GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGA 657 K T ++II+EL +D R FK + ET + + G I++ + Sbjct: 1087 LASKKRENKKETYSNIIRELSCGFQDWRIPFKEPSPDEEFYMISGETEDTIAEGRIVQAS 1146 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNK--FVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V + N A + G++ S+ + D +K GDI+ K+ + QR ++ Sbjct: 1147 VRRLQNGRAICVLDSGLTGMLMKEDFSDDGRDIVDLADQLKEGDILTCKIKSIQKQRYQV 1206 Query: 716 ALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAM 769 L + E + + +R + + +A+ + + Sbjct: 1207 FLICKESEMRNNRHQHNQNVDAYYHEDRNSLQLVKEKARKEKELVRKHFKSRMI 1260 >UniRef50_Q4RRW0 Chromosome 7 SCAF15001, whole genome shotgun sequence. (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4RRW0_TETNG Length = 1671 Score = 404 bits (1038), Expect = e-111, Method: Composition-based stats. Identities = 145/1003 (14%), Positives = 281/1003 (28%), Gaps = 301/1003 (30%) Query: 5 SFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYL 63 S I + Q+ VPFIA YRKE L+ L + Sbjct: 216 STIAKIKEALNFMRNQL----------FEVPFIAFYRKEYVEPELNINDLWKVWQWDEKW 265 Query: 64 RELEERRQAILKSIS-------EQGKLTDD---------LAKAINATLSKTEL------- 100 +L+ R+Q + + EQ D L A +++ E+ Sbjct: 266 TQLKTRKQNLTRLFQKMQSYQFEQISADPDKPLADGIRPLDTADMESVTVKEVSEDGKMR 325 Query: 101 -EDLYLPYKP--------------------------------KRRTRGQIAIEAGLEPLA 127 E + +K RR I GL+ LA Sbjct: 326 DEWMEWSFKSDSVCLMSVYSLGEEEELEIEEEEQKGPDLKLASRRDMYSICQSVGLDGLA 385 Query: 128 DLLWSDPSHTPEVAAAQYVYAD-----------------KGVADTKAALDGARYILMERF 170 P E Y + + +A L+G RY++ + Sbjct: 386 KKFGLTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFSTPEAVLEGTRYMVAMQI 445 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGA----KFRDYFDHHEPLSTVPSHRALAM 226 A + + +R + A + ++E + + ++P+ + + L M Sbjct: 446 AREPLVRHVLRQTFQERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELTGEQFLKM 505 Query: 227 FRGRNEGVLQLSLNADPQFDEPP--KESYCEQIIMDHLGLRLNNAP--ADSWRKGVVSWT 282 +EG+L + + D + ++Y ++I + ++ + R + Sbjct: 506 CLAEDEGLLSIDICIDLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERA 565 Query: 283 WRIKVLMHLETELMGTVRERAEDEAINV---------------------------FARNL 315 + + EL + A++ + V R L Sbjct: 566 LTQFLYPQMAKELKSKLIAEAKESIVRVSCLLQHTMWIFKKFKNKTLFFSASSQSCCRRL 625 Query: 316 HDLLMAAPAGLR------------------ATMGL--DPGLRTGVKVAVVDATGKLVATD 355 ++ L AP +G+ P T V A+++ G++V Sbjct: 626 YNWLKVAPYRPDHLAEEDDDLMDESQGKGIRVLGVAYAPSRDTPVFCALINGEGEVVDFL 685 Query: 356 TIYPHTGQAAKAAMT-------------------------------------VAALCEKH 378 + + + Sbjct: 686 RLPYFMKRRNAFREEEREKKVRKQSRQGVAGHYSELTALESVCLLQALDIENLKKFLSSK 745 Query: 379 NVELVAIGNGTASR-----ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEF 433 ++A+ + +R +++++ +V A++Y S+ + +F Sbjct: 746 KPHVIAVAGENRDAQMIMEDMKRAISELEQESALPAVGVELVDNELATLYMNSKKSEADF 805 Query: 434 PDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVE 488 D LR AVS+AR++QDPL E ++ D + + Q V + L L Sbjct: 806 RDYPPLLRQAVSVARKIQDPLMEYAQVCSTDEDILCLKLHPLQEHVVKEDLLSALYCEFI 865 Query: 489 DCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFE 548 + VN VGVD+N A Sbjct: 866 NRVNEVGVDVNKAIAHP------------------------------------------- 882 Query: 549 QCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQAL------------KDLMGNSSE 596 + + LD S VHPE Y ++ + ++++ N Sbjct: 883 HTQSLVHTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEILENPER 942 Query: 597 LRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETM 645 L++L F +E T+ DI EL +D R ++ + ET Sbjct: 943 LKDLDLDAFAEELERQCYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNMVTKETP 1002 Query: 646 NDLQPGMILEGAVTNVTNF----------------------------------------- 664 G ++ VT + + Sbjct: 1003 ETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELSEVWNHFDS 1062 Query: 665 --------GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 G + G + LS+K V+ P VK G V +++++D+++ + Sbjct: 1063 GSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIEKFSVD 1122 Query: 717 LTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNS 759 LT R + + N + + + + + E Sbjct: 1123 LTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQDEELKKKQQ 1165 >UniRef50_B9GLV1 Global transcription factor group (Fragment) n=5 Tax=Magnoliophyta RepID=B9GLV1_POPTR Length = 1209 Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 153/859 (17%), Positives = 301/859 (35%), Gaps = 154/859 (17%) Query: 15 QARPEQVDAAVRLLD-EGNTVPFIARYRKE----ITGGLDDTQL---------------- 53 + E + + + D E +PFIA YRKE + L + + Sbjct: 122 KINKEDIVRFLEMHDLEKYDIPFIAMYRKEKCLSMLEDLGEDGIQNECSNDTEGKPRLKW 181 Query: 54 ----RNLETRLSYLRELEERR----QAILKSISEQGKLTDD-------------LAKAIN 92 + L++R+ ++ K E+ DD + K++ Sbjct: 182 HKILWAINELDRKWLLLQKRKIMLEESYKKRYEEECNNIDDMARLSLINLHFDTIMKSLM 241 Query: 93 ATLSKTELEDLYLPY----------------KPKRRTRGQIAIEAGLEPLADL------- 129 ++ +++D+ + + + +RR+ I+AGL LA Sbjct: 242 LAETEKDIDDVSMKFSLHFPPTEEVMEGKFKRRERRSAYSDYIKAGLWELAVKFVYSSKQ 301 Query: 130 -------------LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 W D + +PEV A+++ A + +A L GAR+I + + ++ Sbjct: 302 FCQHLRQAKMGMDFWEDLNESPEVIASKFTCA--SLETPEAVLKGARHIAALEISCEPSV 359 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMFRGRNE 232 R + A + + +E + + +PL + L + + E Sbjct: 360 RKHARGFFTDEALVSTRPTPKGAKEIDFCHQFSSVKWLRDKPLGKFQDAQWLRIQKAEEE 419 Query: 233 GVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLE 292 +L++++ I G D RK ++ + +L LE Sbjct: 420 KLLEVTIRLPEDSLNKLIS--YSHKIYLVGGDDGYTQLWDEQRKLILQDVFSNCLLPSLE 477 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPA-GLRATMGLDPG------------LRTG 339 E + RA+ + + L + AP R GL+ G + Sbjct: 478 KETRVLLTTRAKCLVLMEYGEQLWNRASVAPYPHKRNVAGLEEGTGPRVMACCWGPGKPP 537 Query: 340 VKVAVVDATGKLVATDTIYPHTGQAAK---------AAMTVAALCEKHNVELVAIGNGTA 390 ++D+ G+L+ + ++ + V H +++ +G A Sbjct: 538 TTFVMLDSCGQLLDVLQSGSISLRSQNVTGLQRKKYDQLRVHKFIISHQPDVIVLGAANA 597 Query: 391 S--RETERFYLDVQKQFPKV--------TAQKVIVSEAGASVYSASELAAQEFPDLDVSL 440 S R + V K + E +Y SE++ + P + + Sbjct: 598 SCPRLKDDIKEIVLKIEESSIDADQVLNGIGVIYGDETLPQLYEKSEVSLRHLPGQEGIV 657 Query: 441 RGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVG 495 + AV++ R LQ+PLA + + + S + H ++ + ++ ++ D N VG Sbjct: 658 KRAVALGRYLQNPLAMIATLCGVQKEIVSWKLTSLDHFLTPEEKYGMIEMLMVDITNQVG 717 Query: 496 VDLNTAS-----VPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC 550 VD+N A L V+GL A + NR++L K F Sbjct: 718 VDINAAVSQDWLSAPLQFVSGLGSQKAAFLQRELAAGKIVNNRKELAICGLTEKKIFFNA 777 Query: 551 AGFLRINHG--------DNPLDASTVHPEAYPVVERILAAT------QQALKDLMGNSSE 596 GFLR+ G + LD + +HPE+Y + E+++ LK + N Sbjct: 778 VGFLRVCCGEILSFGCEYDMLDGTRIHPESYGLAEKLVKDVYDDVAEAHPLKHVRNNPQL 837 Query: 597 LRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETM 645 L++ + + D + T+ DI EL DPR ++ + + Sbjct: 838 LKDFDINAYADNFEIEQGENKKLTLYDIKTELLHGFLDPRRPYEEPTQDEEFCLISGKDE 897 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE-DPHTVVKAGDIVKVK 704 + G I++ V V + AF + G++ S++ + ++ GDI+ K Sbjct: 898 DAFAEGRIVQAIVCRVLSQRAFCALDSGLIGMITKDDYSDEAADYSLTKRLREGDILTCK 957 Query: 705 VLEVDLQRKRIALTMRLDE 723 + ++D R ++ LT + E Sbjct: 958 IKQIDKSRHQVLLTCKESE 976 >UniRef50_C5Z0A7 Putative uncharacterized protein Sb09g024270 n=1 Tax=Sorghum bicolor RepID=C5Z0A7_SORBI Length = 1687 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 152/934 (16%), Positives = 308/934 (32%), Gaps = 201/934 (21%) Query: 15 QARPEQVDAAVRLLD-EGNTVPFIARYRKE----ITGGLDDTQ----------------- 52 + + V +L +PFIA YRKE + LD + Sbjct: 361 DIDQKDIVNVVTMLHVNKFEIPFIAMYRKENCPTLLKSLDSDEGNEDNEDNKDNESDARK 420 Query: 53 ------LRNLETRLSYLRELEERR-------------------------------QAILK 75 L ++T L++R+ +I++ Sbjct: 421 MKWHKLLWAVQTLDRKWLLLQKRKVALQLYYEKRFDDEKRRIDDVTRQELNSQLYNSIIE 480 Query: 76 SIS--EQGKLTDDLAKAINATLSKTELEDLYLPYK-PKRRTRGQIAIEAGLEPLADLL-- 130 ++ + K +D+ N E+E+ +K PKR++ I +AGL +A+ Sbjct: 481 ALKDAKSEKEVEDVDAKFNLHFPPGEVEE-EGQFKRPKRKSLYSICHKAGLWEVANQFGR 539 Query: 131 -------------------WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFA 171 H+PE AA + A + L GAR++ Sbjct: 540 SAEQLGHHLTLTKIPEAGELESGRHSPEEVAANFTCAM--FETAQDVLRGARHMAAVEIG 597 Query: 172 EDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRD----YFDHHEPLSTVPSHRALAMF 227 + + VR A + ++ + + +PLS + L + Sbjct: 598 CEPIVRKHVRGIFMNKAVVSTSPTPEGNTIIDPYHQLSGVKWLREKPLSKFVDAQWLLIQ 657 Query: 228 RGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV 287 + E +L++++ + E + D + + D RK ++ + + Sbjct: 658 KAEEEKLLKVTVKLPEDAKKKLMSEARENYLSDCVSK--SAQLWDEQRKMILDDAFFNFL 715 Query: 288 LMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR-----------------ATM 330 L +E E + +A+ + + L + + AP + M Sbjct: 716 LPSMEKEARSLLTAKAKHWLHMEYGKQLWNNVTVAPWKKKDADKKDADIDLDDESELRVM 775 Query: 331 G--LDPGLRTGVKVAVVDATGKLVATDTI---------YPHTGQAAKAAMTVAALCEKHN 379 PG + ++D++G+LV + V H Sbjct: 776 ACCWGPG-KPATTFVMLDSSGELVDVLYAGSISNRSQGVAEQQRKKNDQQRVLKFMTDHQ 834 Query: 380 VELVAIGNGTAS-------------------------------RETERFYLDVQKQFPKV 408 +V +G + R E DV Q + Sbjct: 835 PHVVCVGASNYNCRQLKDDIYELQALSLFLKFHFTKVLKVVIFRIVEDHPRDVNPQMENL 894 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 + V E+ +Y S +++ + P ++ AV++ R LQ+PLA + + + Sbjct: 895 SV--VYGDESVPRLYENSRISSDQLPGQPGIVKRAVALGRYLQNPLAMIATLCGPGKEIL 952 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPL-----LTRVAGLTRMMAQ 518 S + + ++ + ++ V+ D N +G D+N A+ L +AGL A Sbjct: 953 SWKLHALEQFLTPDEKYEVVEQVMVDATNQIGFDVNLAASHEWHFSTLQFIAGLGPRKAS 1012 Query: 519 NIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG---------DNPLDASTVH 569 + G +R++L+K LG K F +GFLR+ + L+ + +H Sbjct: 1013 ALQKDLVREGSIFSRKELVKP--LGRKVFMNASGFLRVRRSGAAAASAQLIDLLEDTRIH 1070 Query: 570 PEAYPVVERILAAT-----------------QQALKDLMGNSSELRNLKASDF----TDE 608 PE+Y + + + + A++ + LR+LK ++ ++E Sbjct: 1071 PESYVLAKNLAKDVYVEDAQHEINEMDDDEQEMAIEHVREKPDWLRSLKIEEYVKSISEE 1130 Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN 663 + T+ DI +EL D R + D ET + + G I++ V N+ Sbjct: 1131 YRKLETLRDIRRELLSGFSDWRTPYTEPSPDDEFWMLSGETEDTISDGRIVQVTVRNIQE 1190 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +V + S++ + + ++ GD++ K+ V+ R + LT + E Sbjct: 1191 NKIICTFDSGLKAIVMADNYSDEGFDLESSQLREGDVLTGKIRNVNKNRFMVYLTCKASE 1250 Query: 724 QPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 +R + + + + + Sbjct: 1251 MRRRPFSRGDQDPYYHEQDMISQTVEDKARKQKE 1284 >UniRef50_Q9W420 Transcription elongation factor SPT6 n=15 Tax=Neoptera RepID=SPT6H_DROME Length = 1831 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 144/809 (17%), Positives = 278/809 (34%), Gaps = 164/809 (20%) Query: 105 LPYKPKRRTRGQI---AIEAGLEP--LADLL--------WSDPSHTPEVAAAQYVYADKG 151 PY R+ I A GL P A+ L + S P A QY+ Sbjct: 527 SPYAVFRK--AGICGFAKHFGLTPEQYAENLRDNYQRNEITQESIGPTELAKQYLSPR-- 582 Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRD 207 T + A+Y++ + A++ L +R+ + A + +E + Sbjct: 583 FMTTDEVIHAAKYVVARQLAQEPLLRKTMREVYFDRARINIRPTKNGMVLIDENSPVYSM 642 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFD---EPPKESYCEQIIMDHLGL 264 + +P+S + + + + E +L+++ + + + Y E+ + Sbjct: 643 KYVAKKPVSDLFGDQFIKLMMAEEEKLLEITFLEEFEGNACANGTPGDYVEESKALYQLD 702 Query: 265 RLNN--APADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 + + R V + V+ L EL T+ E A+ + L+ L A Sbjct: 703 QFAKHVQEWNKLRAECVQLALQKWVIPDLIKELRSTLHEEAQQFVLRSCTGKLYKWLKVA 762 Query: 323 PAGLR----------------ATMGL--DPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 P + +GL DP AV G + + P+ + Sbjct: 763 PYKPQLPPDFGYEEWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRL-PNILKR 821 Query: 365 AKA------------AMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKV---- 408 + ++ + +V IG SR+ + D+++ ++ Sbjct: 822 KNSYNLEEKAQKLADLRKLSDFIKMKKPHIVVIGA--ESRDAQNIQADIKEILHELETSE 879 Query: 409 ---TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----- 460 + I+ A +Y+ S+ +F + L+ A S+AR++QDPL E ++ Sbjct: 880 QFPPIEVEIIDNELAKIYANSKKGESDFKEYPPLLKQAASLARKMQDPLVEYSQLCDADD 939 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL-----NTASVPLLTRVAGLTRM 515 + + Q V + QL +L + + VG+D+ N+ ++ LL + GL Sbjct: 940 EILCLRYHPLQERVPREQLLEQLSLQFINRTSEVGLDINLMVQNSRTINLLQYICGLGPR 999 Query: 516 MAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDA 565 Q ++ + N + +NR QL+ V LGP+ F C+GF++I+ LD Sbjct: 1000 KGQALLKLLKQSNQRLENRTQLVTVCHLGPRVFINCSGFIKIDTSSLGDSTEAYVEVLDG 1059 Query: 566 STVHPEAYPVVERILAATQQAL----------KDLMGNSSELRNLKASDFTDE------K 609 S VHPE Y ++ + ++++ + L++L F E Sbjct: 1060 SRVHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFG 1119 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVT-- 662 T+ DI EL +D R + + ET + G + VT T Sbjct: 1120 SKSITLYDIRNELSCLYKDYRTPYTKPSAEELFDMLTKETPDSFYVGKCVTAMVTGFTYR 1179 Query: 663 -------------------------------------------------NFGAFVDIGVH 673 G V + Sbjct: 1180 RPQGDQLDSANPVRLDSNESWQCPFCHKDDFPELSEVWNHFDANACPGQPSGVRVRLENG 1239 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G +HI +LS++ V +P V+ ++ V+++++D+ R + + R + N R Sbjct: 1240 LPGFIHIKNLSDRQVRNPEERVRVSQMIHVRIIKIDIDRFSVECSSRTADLKDVNNEWRP 1299 Query: 734 GGNE------RPQNNRPAAKPRGREAQPA 756 + Q+NR + + R + Sbjct: 1300 RRDNYYDYVTEEQDNRKVSDAKARALKRK 1328 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%) Query: 16 ARPEQVDAAVRLL-DEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYLRELEERRQAI 73 ++ + + ++ VPFIA YRKE L+ L + +L ER++ + Sbjct: 344 TTVNKIKQTLEFIRNQQLEVPFIAFYRKEYVKPELNIDDLWKVYYYDGIWCQLNERKRKL 403 Query: 74 LKSISE--QGKLT-----------DDLA-------KAINATLSKTELEDLYLPY 107 + Q +L DD+ + + S EL+D+++ + Sbjct: 404 KVLFEKMRQFQLDTLCADTDQPVPDDVRLILDSDFERLADVQSMEELKDVHMYF 457 >UniRef50_Q29GF4 GA11490 n=5 Tax=Coelomata RepID=Q29GF4_DROPS Length = 1841 Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 146/809 (18%), Positives = 274/809 (33%), Gaps = 162/809 (20%) Query: 105 LPYKPKRRTRGQI---AIEAGLEP--LADLLW--------SDPSHTPEVAAAQYVYADKG 151 PY R+ I A GL P A+ L + S P A QY+ Sbjct: 538 SPYAVFRK--AGICGFAKHFGLTPEQFAENLRDNYQRNEVTQESLGPLELAKQYLSPR-- 593 Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRD 207 T+ + A+Y++ + A++ L +R+ + A + +E + Sbjct: 594 FMTTEEVMHAAKYVVARQLAQEPLLRKTMREVYFDRARIDIRPTKNGMVLIDENSPVYSM 653 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFD---EPPKESYCEQIIMDHLGL 264 + +P+ + + + + E +L+++ + + + P Y E+ + Sbjct: 654 KYVAKKPVGDLFGDQFIKLLMAEEEKLLEITFLEEFEGNANANGPPGDYVEEAKALYNLD 713 Query: 265 RLNNAP--ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 + + ++ R V + V+ L EL T+ E A+ + L+ L A Sbjct: 714 QFSKHVLEWNALRAECVQLALQKWVIPDLIKELRATLHEEAQQFVLRSCTAKLYKWLKVA 773 Query: 323 PAGLR----------------ATMGL--DPGLRTGVKVAVVDATGKLVATDTIY------ 358 P +GL DP AV G + + Sbjct: 774 PYKPELPQDYKYDDWSTLRGIRVLGLAYDPDHSVAAFCAVTTVEGDISDYLRLPNILKRK 833 Query: 359 -----PHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKV----- 408 GQ ++ + +V IG SR+ + D+++ ++ Sbjct: 834 SSHNAEEKGQKLADLRKLSEFIKMKKPHIVVIGA--ESRDAQMIQTDIKEILKELETTEQ 891 Query: 409 --TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----D 461 + I+ A +Y+ S+ +F + L+ AVS+AR++QDPL E ++ + Sbjct: 892 FPPIEVEIIDNELAKIYANSKKGESDFKEYPPQLKQAVSLARKMQDPLVEYSQLCDADDE 951 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMM 516 + Q V + L L + + VG+D+N +V LL GL Sbjct: 952 ILCLRYHPLQERVPRDMLLEYLSLEFINRTSEVGLDINMMVQNSRTVNLLQYTCGLGPRK 1011 Query: 517 AQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDAS 566 Q ++ + N + +NR QL+ V LGPK F C+GF++I+ LD S Sbjct: 1012 GQALLKLLKQSNQRLENRTQLVTVCHLGPKVFINCSGFIKIDTSSLGDSTEAYVEVLDGS 1071 Query: 567 TVHPEAYPVVERILAATQQAL----------KDLMGNSSELRNLKASDFTDE------KF 610 VHPE Y ++ + ++++ + L++L F E Sbjct: 1072 RVHPETYEWARKMAIDAMEYDDEETNPAGALEEILESPERLKDLDLDAFAVELERQGFGS 1131 Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNF- 664 T+ DI EL +D R F+ + ET + G + VT T Sbjct: 1132 KSITLYDIRNELSCLYKDYRSPFQKPSAEELFDLLTKETPDSFYVGKCVTAMVTGFTYRR 1191 Query: 665 --------------------------------------------------GAFVDIGVHQ 674 G V + Sbjct: 1192 PQGEQLDNANPVRNETTGSWQCPFCHKDDFPELSEVWNHFDANSCPGQASGVRVRLDNGL 1251 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 G +HI +LS+K V +P V+ ++ V+++++D+ R + + + + N R Sbjct: 1252 PGFIHIKNLSDKQVRNPEERVRVAQMIHVRIIKIDIDRFSVDCSSKTADLKDVNNEWRPR 1311 Query: 735 GNE------RPQNNRPAAKPRGREAQPAG 757 + +NR + + + Sbjct: 1312 RDAFYDFVTEELDNRKVTDAKAKALKRKT 1340 Score = 60.9 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 22/114 (19%) Query: 16 ARPEQVDAAVRLL-DEGNTVPFIARYRKEITGG-LDDTQLRNLETRLSYLRELEERRQAI 73 +++ + + ++ VPFIA YRKE L+ L + +L ER++ + Sbjct: 355 TTVKKIKQTLEFIRNQQLEVPFIAFYRKEYVKPELNIDDLWKVYYFDERWCQLNERKRKL 414 Query: 74 LKSISE--QGKLT-----------DDLA-------KAINATLSKTELEDLYLPY 107 + Q +L DD+ + +N S EL+D+++ + Sbjct: 415 KALFEKMRQFQLDTLCADPDKPIPDDVRLMLDSDFERLNDVQSMEELKDVHMYF 468 >UniRef50_C5VIF1 S1 RNA binding domain protein n=2 Tax=Bacteria RepID=C5VIF1_9BACT Length = 910 Score = 401 bits (1030), Expect = e-110, Method: Composition-based stats. Identities = 151/457 (33%), Positives = 227/457 (49%), Gaps = 39/457 (8%) Query: 7 CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL 66 I+ + + V A + LL+EG T+PFI+RYRKE TGGLD+ Q+ ++ L+EL Sbjct: 47 ASFISHSLSLPLQSVSAVLTLLNEGCTIPFISRYRKERTGGLDEVQITDISELYDRLKEL 106 Query: 67 EERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPL 126 +R++ IL++I EQ KLT +L I A + TELED+YLPYKPKRRTR QIA E GLEPL Sbjct: 107 GKRKETILRTIREQEKLTPELEAKILACMDSTELEDIYLPYKPKRRTRAQIAREQGLEPL 166 Query: 127 ADLLW------SDPSHTPE--------VAAAQYVYADKGVADTKAA----LDG------A 162 A + + P PE + A + ++ L G A Sbjct: 167 ALAIMREAQKPTAPPDLPEGGGDKLASILQKYQGRAKESLSSRVRIGTPPLSGRSGGALA 226 Query: 163 RYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPS 220 I+ E +E+ VR + A + S V+ + +E KF DYFD EPL S Sbjct: 227 LDIIAEIVSENQQARNTVRTAYQRGAVITSKVIKKMKDTDEAQKFADYFDFSEPLRRCNS 286 Query: 221 HRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVS 280 HR LAM RG ++G+L++S+ D + E I + + V Sbjct: 287 HRLLAMRRGEDQGILRVSITIDGE----------ECIARLTRQFVRGHGVCQTLVSQAVE 336 Query: 281 WTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGV 340 +++ + +E E + RA++EAI VF NL LL++ P G + + LDPG G Sbjct: 337 DSFKRLINPSIENEFAALSKGRADEEAIKVFTENLRQLLLSPPLGQKRVLALDPGFANGC 396 Query: 341 KVAVVDATGKLVATDTIYPHTGQAA--KAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 K+A +D G L+ + IYPH + +A + + +N+E +AIGNGTASRE++ F Sbjct: 397 KIACLDEQGNLLHHEIIYPHPPRNQVRQATEALQRMINTYNIEAIAIGNGTASRESKEFV 456 Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPD 435 ++ + + + G+ Y + Q+F D Sbjct: 457 ENITTETTTGPSPSPLPHREGSD-YRHLPKSKQQFTD 492 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 112/201 (55%), Positives = 142/201 (70%) Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVG 468 + +VSE GAS+YSAS +A +EFPD DV+ RGA+SI RRL DPLAELVKIDPKSIGVG Sbjct: 532 SLFIFLVSEDGASIYSASPVAREEFPDEDVTTRGAISIGRRLMDPLAELVKIDPKSIGVG 591 Query: 469 QYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENG 528 QYQHDV Q++L LD V CVN VGV+LNTAS+ LLT V+GL +A+NI+ +R E+G Sbjct: 592 QYQHDVDQSKLKHSLDQTVMSCVNQVGVNLNTASLHLLTYVSGLGPALARNIIDYRREHG 651 Query: 529 QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALK 588 F +R QL KV RLG A++QCAGFLRI NPLD S VHPE+Y +VE++ + +K Sbjct: 652 PFTSRAQLKKVKRLGDTAYQQCAGFLRIPDAKNPLDNSAVHPESYHIVEQMAKDLKCTIK 711 Query: 589 DLMGNSSELRNLKASDFTDEK 609 DL+GN L + + + Sbjct: 712 DLIGNKKLLAEIDVKRYLTPQ 732 >UniRef50_A8PCB0 SH2 domain containing protein n=1 Tax=Brugia malayi RepID=A8PCB0_BRUMA Length = 1512 Score = 400 bits (1029), Expect = e-110, Method: Composition-based stats. Identities = 170/947 (17%), Positives = 321/947 (33%), Gaps = 205/947 (21%) Query: 8 RIIAGEIQARPEQVDAAVRLLDEG-NTVPFIARYRKEIT-GGLDDTQLRNLETRLSYLRE 65 IA E P+++ A++ + VPFIA YRKE L L + Sbjct: 358 AKIAAEA---PDKIKEALKFIRNQLFEVPFIAFYRKEYVESCLVINDLWKVYQWDEKWCH 414 Query: 66 LEERRQAILKSISEQ-------------GKLTDDLAKAINATLSKTELEDL-------YL 105 L++R++ +L+ + +T+ ++ + L D+ Y Sbjct: 415 LQQRKKRLLELMKRMLNYQMENDNAAGMRIVTEQDMNEVHGVQTVEGLMDVSTKFQLYYG 474 Query: 106 PYKPK----------------------------RRTRGQIAIEAGLEPLADLLWSDP--- 134 P PK R + + I+ GL +A P Sbjct: 475 PEVPKMIDWEKIQNLSEDDPEREAAEMRFRAATRTDKYMLCIQNGLSGMASRFGLTPLQF 534 Query: 135 ------------SHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 E A Y + +A L GA +++ ++ + + + +R Sbjct: 535 AENLDWKRHDIVQDDEEPLKAAEQYVCQSFPTPEAVLTGAIHVVAKQLSREPKVRELLRL 594 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 + EE + + +P++ + L + G+L L Sbjct: 595 RYRLRLKISVCPTKKGREEIDENHKLWPRRYVRDKPVANLRHDEYLWYVQAHASGLLNLK 654 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAP----ADSWRKGVVSWTWRIKVLMHLETE 294 L+ D + D +++ ++ + + R + + R+ VV+ +L E E Sbjct: 655 LHCDTEDDIRFEKTMLQEFLSEQPYHRDEYSRVVDMWNKIREEVVTVCVNNFLLPVFERE 714 Query: 295 LMGTVRERAEDEAINVFARNLHDLLMAAPAG---------------LRATMGL-DPGLRT 338 + + A+D I +NL+D + A + + P R Sbjct: 715 AHERLLQEAKDYVIKQSTQNLYDRIKTAAYRNVHDDDDDFESGFAGGTKVLSIVYPEERD 774 Query: 339 -GVKVAVVDATGKLVATDTIY-----PHTGQAAKAAMT------VAALCEKHNVELVAIG 386 A++D G+++ + ++ ++ +A + + EK ++AI Sbjct: 775 QASFCALIDQDGQILDHLRLVHITKSMNSKRSDEAELKRQDMIHLRKFIEKRRPHVIAIC 834 Query: 387 --NGTA---SRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLR 441 N A R+ E ++ +++ + IV A +Y S+ A EF + LR Sbjct: 835 GENMDAYYLRRDIESLLHEISGIAKEISVE--IVDNEAAKIYMHSKQAITEFSNYPPMLR 892 Query: 442 GAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGV 496 AVS+ R L DPL E + D + Q +V++ +L L + VN VGV Sbjct: 893 QAVSLGRLLLDPLIEYAHLCNTDDDILCVSYHPLQSEVNKDELLFALSLEFINRVNEVGV 952 Query: 497 DLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLLKVSRLGPKAFEQC 550 D+N + LL V GL A +++ +N ++R +L+ + R+GPK F Sbjct: 953 DVNRCLEYSHTSYLLQFVCGLGPRKAVHLLKILKQNDNLLESRTKLVTLCRMGPKVFMNS 1012 Query: 551 AGFLRINHGD---------NPLDASTVHPEAYPVVERI---------LAATQQALKDLMG 592 AGF++I+ LD S VHPE Y ++ A AL++++ Sbjct: 1013 AGFIKIDTAKVSERTDAYVEVLDGSRVHPETYEWARKMAVDALEIDDAADPTSALEEILQ 1072 Query: 593 NSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 N +L++L F +E T+ DI EL +D R +++ + Sbjct: 1073 NPDKLKDLDLDAFAEELARQGFGNKSITLYDIRAELNHRYKDLRIPYESPSAERIFTMLT 1132 Query: 647 DLQ---PGMILEGAVTNV------------------------------------------ 661 G ++ G V ++ Sbjct: 1133 KETSDSIGKLVMGRVMHIVYRKPRDPEERERVPPIRDERTGQWKCQYCYKPDFNNTNEVW 1192 Query: 662 --------TNFGAFVDIGVHQDGLVHISSLSNKFVE--DPHTVVKAGDIVKVKVLEVDLQ 711 G V G + LS++ DP V+ + ++LE+D Sbjct: 1193 QHIDSCPGQPVGVKVRFDSGITGFIPNKYLSDRPDSFVDPSERVRRNQPIYCRILELDPD 1252 Query: 712 RKRIALTMRLDE----QPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 + + R + QP + R + Q++ K + + Sbjct: 1253 KFSATCSCRSSDLRGLQPQNSEFDRYFDKLKCQDDDEKDKKLREQRK 1299 >UniRef50_UPI000186D180 transcription elongation factor SPT6, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186D180 Length = 1783 Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 129/798 (16%), Positives = 265/798 (33%), Gaps = 155/798 (19%) Query: 115 GQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD-----------------KGVADTKA 157 + +AGL L+ P+ E Y + + + Sbjct: 530 YAMCRKAGLTGLSKKFGLTPAQFGENLRDNYQRHEVDQESTEPLQLAKQYISRQFMQPED 589 Query: 158 ALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHE 213 L ++++ + A + + VR+ ++ A + +E A + + + Sbjct: 590 ILKAVKFMVATQLAREPLVRKCVRETFFEKAKIDVKPTRKGIKEIDENHACYSMKYLKGK 649 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNN--APA 271 P+ + + + + + +L + D + SY E++ + + Sbjct: 650 PVRELQGDQFIKLAMAEEDKLLT--ITFDERIPGLTSLSYIEEVKQLYYRDEFSKNVQDW 707 Query: 272 DSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA------- 324 ++ R V + +L L+ EL + A + + + R L++ + AP Sbjct: 708 NALRVECVEIALKKILLPDLKKELKAHLLSEAREYILKLCTRKLYNWIKIAPYTSEFDHD 767 Query: 325 -------GLRATMGLD--PGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMT----- 370 MG+ P L VV G+ + PH + +A Sbjct: 768 DEDWDTSKGLRVMGVAYVPDLSQAAFACVVGPDGECTDYLRL-PHLLKRKLSANKEDNIK 826 Query: 371 -------VAALCEKHNVELVAIGNGTASRET-------ERFYLDVQKQFPKVTAQKVIVS 416 + L + ++ IG SR+ ++ + + + I+ Sbjct: 827 KEHDLTSLKNLIQSKKPHVIVIGG--ESRDAIMIKTDIQQLVTSLVEDDEFASIAVEILD 884 Query: 417 EAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQ 471 A Y+ S EF D + LR A+S+ARR+QDPL E ++ + + Q Sbjct: 885 NELAKTYANSIKGENEFRDYPLLLRQAISLARRMQDPLTEFSQLCTSDEEILCLRYHPLQ 944 Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVA-WRD 525 V + +L L + N VGVD+N A + L+ + G A ++ + Sbjct: 945 DQVPKEELLEALYIEFINRTNEVGVDVNRAVAQAYTSNLVQFICGFGPRKAAALLKTLKQ 1004 Query: 526 ENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------NPLDASTVHPEAYPVV 576 N + +NR QL+ +GPK F CAGF++I+ LD S VHPE Y Sbjct: 1005 NNQRLENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWA 1064 Query: 577 ERILAATQQAL----------KDLMGNSSELRNLKASDFTDE------KFGVPTVTDIIK 620 ++ + ++++ + L++L F +E T+ DI Sbjct: 1065 RKMAVDALEYDDEEANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKSITLYDIRA 1124 Query: 621 ELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTN------------ 663 EL D R + + + E+ G ++ V +T+ Sbjct: 1125 ELNHRYNDLRTPYWSPNSEELFDMLTKESPETFYIGKMVLARVVGITHKRPKGDQLDQAN 1184 Query: 664 ---------------------------------------FGAFVDIGVHQDGLVHISSLS 684 G + + +G +H+ +LS Sbjct: 1185 PVRNDETNLWQCPFCLKNDFPELSEVWNHFDAGSCPGQATGVRLRLDNGINGYIHVRNLS 1244 Query: 685 NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRP 744 +K V +P V+ ++ ++ ++++ R + T + + + + R + ++ Sbjct: 1245 DKHVSNPEERVQQNQMIHCRITKIEVDRFSVECTSKSSDLADKNHEWRPPKDPYFDHDAE 1304 Query: 745 AAKPRGREAQPAGNSAMM 762 + E + Sbjct: 1305 TKDIKAEEDVKKLKARQQ 1322 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 22/110 (20%) Query: 20 QVDAAVRLLDEGN-TVPFIARYRKEIT-GGLDDTQLRNLETRLSYLRELEERRQAILKSI 77 ++ A+ + N VPFIA YRKE L+ L + +L+ R+ ++K Sbjct: 345 KIKRALDFIRNQNFEVPFIAFYRKEYVFPELNINDLWKVYKYDEKWCQLKTRKNNLIKLF 404 Query: 78 SEQ-----GKLT---------------DDLAKAINATLSKTELEDLYLPY 107 LT DD + + + EL+D+++ + Sbjct: 405 ERMRDFLCEILTQNIDAPIPEDVRIISDDDIERLKNVKTMEELKDVHMNF 454 >UniRef50_Q2U561 Transcription elongation factor spt6 n=26 Tax=Eurotiomycetidae RepID=SPT6_ASPOR Length = 1422 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 159/919 (17%), Positives = 318/919 (34%), Gaps = 175/919 (19%) Query: 6 FCRIIAGEIQAR-PEQVDAAVR-LLDEGNTVPFIARYRKEITGG---------------- 47 + I E++ V + L+ + VPFI ++RK+ Sbjct: 314 LKKRIEPELREPFQRSVAKVLEFLVTDDWEVPFIFQHRKDYMIHAVKAPVEGAGEDGDAS 373 Query: 48 ---------LDDTQLRNLETRLSYLRELEERRQAILKSISEQGKL----TDDLAKAINAT 94 L+ T L ++ + L E+R I K+ L + + + A Sbjct: 374 QYTVRAEKLLNMTDLWDIFDHDLKFKALVEKRNTIQKTYDNLQSLFNVSDSVVEEMLPAA 433 Query: 95 LSKTELEDL--YLPY-----------------------KPKRRTRGQIAI---EAGL--- 123 ++ EL+D+ Y+ + K +T + GL Sbjct: 434 VTMEELQDVQDYIHFQYASQLRDMTLMNSDVNGETHRRKASSKTFFERVRNGKAYGLVRA 493 Query: 124 -----EPLADLLW--------SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERF 170 + A DP+ PE A +V D ++ + A+ + E Sbjct: 494 FGITADAFAQNALKEGRRQYTEDPAERPEEMADGFV--DNDFSNASHVIKAAKSLFAEEI 551 Query: 171 AEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTV--PSHRAL 224 + +R + N + +E+ + + ++ LS + L Sbjct: 552 VMSPKMRKVIRQAYYMNGAVDCFRTEKGLRRIDEQHPYYEFKYLRNQQLSDIARRPELYL 611 Query: 225 AMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWR 284 M + EG++++ + + + ++ I D+ + + R+ V+ Sbjct: 612 RMLKAEEEGLVEVKVRF--ENFDQFRQRLYPDIESDNYSEIADG--WNRSRRDVLDMALG 667 Query: 285 IKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR--------ATMGLDPG- 335 K+ + + +R+ E+ L AP + + L G Sbjct: 668 -KLERLINRSVKENIRQECENHVAKECRETFSQRLDQAPYKPKGMVLGTVPRVLALSTGS 726 Query: 336 ---LRTGVKVAVVDATGKLVATDTIYPHTGQAA-------KAAMTVAALCEKHNVELVAI 385 R + A ++ G+++ + K L ++ +++ + Sbjct: 727 GVVGREPIHWAYIEEDGRVLENGKFVDLSIGDRDRNIPDGKDVEAFVELVDRRRPDVIGV 786 Query: 386 GNGTASRETERFYLDVQKQFPKVTAQ-----------------KVIVSEAGASVYSASEL 428 S ET R Y + + K + +IV++ A +Y SE Sbjct: 787 SGM--SPETRRLYKLLAEVVDKKDLRGAPYTDDHDEEISDRLEVIIVNDEVARLYQHSER 844 Query: 429 AAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAV 486 A ++ P V++A+ LQ PL E + D SI Q V+Q L ++L+ Sbjct: 845 AKKDHPSFAPLTHYCVALAKYLQSPLKEYASLGRDIVSIQFKPGQQLVTQELLLKQLETA 904 Query: 487 VEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLLKV- 539 + D VN VGVD+N A + LL V GL A +++ + N G NR +LL V Sbjct: 905 LVDMVNLVGVDINEAVTDSSTANLLPYVCGLGPRKAAHLLKIVNMNGGVVNNRVELLGVN 964 Query: 540 ---SRLGPKAFEQCAGFLRINHGD-----NPLDASTVHPEAYPVVERILAATQQALKDLM 591 +G K + CA FL I+ + +PLD + VHPE Y + ++ A + ++ + Sbjct: 965 AQYPAMGVKVWNNCASFLYIDFENVDPDADPLDNTRVHPEDYDIARKMAADALELDEEDI 1024 Query: 592 GNS-------------------SELRNLKASDFTDE------KFGVPTVTDIIKELEKPG 626 + +L ++ ++ + T+ I EL++P Sbjct: 1025 KAETDENGTGAIVRKLFREEAQDRVNDLILEEYAEQLEKNLNQRKRATLETIRAELQQPY 1084 Query: 627 RDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 + R ++ D ET + L GM++ ++ V++ + D LV S Sbjct: 1085 EELRKQYVFLSTDDIFTMLTGETSDTLAEGMVVPISIKRVSDDHIDGKLDCGIDALVPES 1144 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--QPGETNARRGGGNERP 739 L++++ + V K+L ++ + +++R ++ +P R G Sbjct: 1145 ELTDRYDIPVRALYSPHQTVSAKILFLNRKNFTCNVSLREEQVSRPVSNTQDRLRGEWDE 1204 Query: 740 QNNRPAAKPRGREAQPAGN 758 + + + + Q G Sbjct: 1205 RQEQQDRESLQEKTQSGGR 1223 >UniRef50_Q8NIV6 Transcription elongation factor spt-6 n=4 Tax=Sordariomycetidae RepID=SPT6_NEUCR Length = 1402 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 153/874 (17%), Positives = 316/874 (36%), Gaps = 169/874 (19%) Query: 8 RIIAGEIQAR-PEQVDAAVRLLD-EGNTVPFIARYRKEITGG------------------ 47 + ++ E+ + V + +G VP++ ++R++ Sbjct: 304 KNLSSELHGPFNKAVGKVLEFFVIDGVEVPYVFQHRRDYLIHAKKMRNPNRRDDPDAPEY 363 Query: 48 -------LDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLT--DDLAKAINATLSKT 98 L L + R E+R A+ ++ + + T D L + I S Sbjct: 364 TVDAEKLLTQDDLWKVLDLDIRFRSFLEKRNALEQTYDKLKEKTRDDILEEMIRQAQSIE 423 Query: 99 ELEDL--------------------------------YLPYKPKRRTRGQI-AIEAGLEP 125 EL+DL ++ RR+ G+ P Sbjct: 424 ELQDLQDYLNFQYSAELKDLAANDNSAQREIKRAGGRTAQFERIRRSNAYKFVQALGITP 483 Query: 126 --LADLLW--------SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAA 175 LA + D S P+ A V AD + ++ AR +L E Sbjct: 484 DRLAKNILRESSKVTSEDDSRLPDDLADTLVDAD--FPTGELVINAARQMLAEEMFASPR 541 Query: 176 LLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTV--PSHRALAMFRG 229 + R + + +E + + + ++ + L M + Sbjct: 542 MRKHFRKNFYGMGIVSCRRTDKGLRKIDEANPYYEVKYLKNMSIADLAVRPELFLKMMKA 601 Query: 230 RNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLM 289 EG++++ ++ + D ++ ++ + ++ R+ V+ + K++ Sbjct: 602 EEEGLIEIKVSL--ENDREFRQQLFSDFASENFSELADK--WNAERQKVIDLAF-DKLVK 656 Query: 290 HLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR--------ATMGLDPG----LR 337 + + ++R +DE + L AP + + L G R Sbjct: 657 VIVKGVKDSLRTACQDELLKTCRELYFKRLDQAPYKPKGMVIGTTPRVLTLSNGMGDPNR 716 Query: 338 TGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERF 397 V +D G+++ T + + +A L + +++ I +A +T R Sbjct: 717 EPVSWVSMDEDGRILEHGTF-TNLARDESQREALAELVRRRQPDVIGISGFSA--DTHRL 773 Query: 398 YLDVQ------------------KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 DV+ ++ + +++++ A +Y S A + P L+ Sbjct: 774 IKDVEGLVSEKGLVGPEYDDPETNEYRSDLLEVIVINDEVARLYKDSPRAVADHPSLNPM 833 Query: 440 LRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVD 497 R +++AR +Q+P+ E + D S+ + YQ + Q +L + L+ + D VN VGVD Sbjct: 834 TRYCIALARYMQNPMKEYAALGKDVTSLQIHPYQQYLPQAKLLKHLETAMVDMVNLVGVD 893 Query: 498 LNTA-----SVPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLL------KVSRLGPK 545 +N A + LL VAGL AQ ++ ++N G +R +L+ K+ LGP+ Sbjct: 894 INVAMQDANTAHLLPYVAGLGPRKAQLLIKGINKNGGVVTSRDELVGDPERHKLPVLGPR 953 Query: 546 AFEQCAGFLRINHGD-----NPLDASTVHPEAYPVVERILAATQQALKDLMG-------- 592 + CA FL I + +PLD + +HPE Y + ++ A ++ + Sbjct: 954 VWNNCASFLFIEYEPTNPESDPLDNTRIHPEDYDLARKVAADALGLDEEDVKAETDENGA 1013 Query: 593 -----------NSSELRNLKASDFTD------EKFGVPTVTDIIKELEKPGRDPRPEFKT 635 ++ L ++ + ++ T+ I EL+ P + R +F++ Sbjct: 1014 GAIVRKLFKDDEQDKVNELILEEYAEQLEREYQQRKRATLETIRAELQVPYEELRKKFES 1073 Query: 636 AQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 E + L GMI+ V V + A V + +G + +S + Sbjct: 1074 LTVDQVFTMLTGENRDSLCEGMIVAANVRVVKDDFAIVKLDCGIEGRIESHDVSYRH--S 1131 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 V+ G +V+ K+++++ + L+MR +E Sbjct: 1132 IKDVLHVGQVVQAKLIDLNRKEFVSKLSMRDEEM 1165 >UniRef50_P34703 Suppressor of Ty 6 homolog n=3 Tax=Caenorhabditis RepID=SPT6H_CAEEL Length = 1521 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 163/948 (17%), Positives = 305/948 (32%), Gaps = 210/948 (22%) Query: 19 EQVDAAVRLLD---EGNTVPFIARYRKEITGGL-DDTQLRNLETRLSYLRELEERRQAI- 73 + + ++ + FI YRKE L L + L E++ I Sbjct: 349 KSIKKVLQFIRVRSNSFEPTFIGFYRKEDIDNLLTMNNLWRVYDFDEKWCHLSEKKNKIY 408 Query: 74 --LKSISEQGKLTDDLAKA-----------INATLSKTELEDLYL--------------- 105 ++ + E +L+DDL + +L D++ Sbjct: 409 DLMRRMREYQELSDDLTAKRRPISDADLMDTKYAETLEQLTDIHANFQLLYGALLDDMIR 468 Query: 106 -------------PYKPK-----RRTRGQIAIEAGLEPLADLL----------------- 130 Y+ K R + Q+ +E G+ LA Sbjct: 469 WEKGRLTGEEEEQEYRVKFKSSIRNDKYQMCVENGIGELAGRFGLTAKQFSENLNWKKHD 528 Query: 131 WSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL 190 P AA +YV +D+ L+GA+++L + + + VR ++AH Sbjct: 529 IEQDPMLPLEAAEEYVCP--AFSDSDMVLNGAKFMLAKEISRQPQVRHSVRQEFRQSAHF 586 Query: 191 VSTVVSGKEEEGAK----FRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFD 246 + + + + +P+ ++ + L + + +G++ + + + + D Sbjct: 587 WIKPTKKGRDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEED 646 Query: 247 EP----PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRER 302 + Y I N +S R V+ ++ ++ EL T+ E Sbjct: 647 QDSNNYLVNKYLSDSIFQKDEYTENVEQWNSVRDECVNMAITEMLVPYMRDELYNTILEE 706 Query: 303 AEDEAINVFARNLHDLLMAAPA-----------------GLRATMGL-DP-GLRTGVKVA 343 A+ + + + G R M + P Sbjct: 707 AKTAVAKKCRKEFASRISRSGYLPDFDNNDDDDDGMDQHGARRIMAVCYPTERDEASFGV 766 Query: 344 VVDATGKLVATDTIY----------PHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE 393 +VD G +V + + + A++ ++ AIG E Sbjct: 767 MVDENGAIVDYLRMVHFTKRTFGGGNNGLRKAESMDLFKKFVQRRKPH--AIGLNIEDME 824 Query: 394 TERFYLDVQKQFPKV--------TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVS 445 R D+++ + ++ A VY S ++ E PD +LR A+S Sbjct: 825 CTRLKRDLEEAVADLFSQNLIYKPIPVFLMDNEAAKVYMRSNVSLAENPDHPPTLRQALS 884 Query: 446 IARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT 500 +AR L DP+ E + D + + Q D+ Q QLA L + + VN GVD+N Sbjct: 885 LARLLLDPIPEYAHLWNIDEDIFCLSLHPLQRDIDQEQLALVLSHELVNKVNEEGVDINK 944 Query: 501 ASV-----PLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLLKVSRLGPKAFEQCAGFL 554 + +L GL A +++ N ++R +L+ +LGPK F CAGF+ Sbjct: 945 CAEFPHYTNMLQFTCGLGPRKATDLLKSIKANDNLIESRSKLVVGCKLGPKVFMNCAGFI 1004 Query: 555 RINH---------GDNPLDASTVHPEAYPVVERILAATQQALK---------DLMGNSSE 596 +I+ LD S VHPE Y ++ + ++M + Sbjct: 1005 KIDTIKVSEKTDAYVEVLDGSRVHPETYEWARKMAVDALEVDDSADPTAALQEIMESPDR 1064 Query: 597 LRNLKASDFTDEKF------GVPTVTDIIKELEKPGRDPRPEFKTAQ----FADGVETMN 646 LR+L F DE T+ DI EL +D R F+ + + Sbjct: 1065 LRDLDLDAFADELSRQGFGEKKSTLYDISSELSARYKDLRQPFQEPTGELLYDLLARSGK 1124 Query: 647 DLQPGMILEGAVTNVTNF-----------------GAF---------------------- 667 +++ G + G V +V G F Sbjct: 1125 EIREGAKVLGTVQSVQYRKVDKDAADSMLPDVGEDGLFTCPCCKSFTSSAPGGIQEHMLG 1184 Query: 668 ---------------VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 V G ++S+ V++P T VK KVL++D +R Sbjct: 1185 DSRQGGCPGTPVGIRVRFDNGMTGFCPNKNISSSHVDNPLTRVKINQPYYFKVLKLDKER 1244 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 + L+ + + + ++R + Q + + + Sbjct: 1245 FSLFLSCKSSDLKEDDLSQRDQYWDEHQYQADLELMKSESKKKTEANT 1292 >UniRef50_B7G9U2 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9U2_PHATR Length = 966 Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats. Identities = 203/771 (26%), Positives = 315/771 (40%), Gaps = 122/771 (15%) Query: 20 QVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEERRQAILKS--I 77 + LL + + VPF+ RYR ++ L Q+ L+T S L+ R +L++ + Sbjct: 69 AAARTLPLLTDASAVPFVCRYRVDLVNPLTTRQVHLLQTLSSRHASLQSVRAKVLRAAAV 128 Query: 78 SEQGK---LTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADLLWSD- 133 + GK + + + SK ELED Y PYKP + + D + +D Sbjct: 129 AHDGKGNAENEAWISKVQTSTSKAELEDWYAPYKPPSK-----------GSVLDRIQNDH 177 Query: 134 PSHTPEVAAAQYVYADKGVADTKAALD-----GARYILMER-FAEDAALLAKVRDYLWKN 187 P P+ + + D+ L ++L + A + +++ V++ LWK+ Sbjct: 178 PELIPQ--LDAFWHGDQDSFSIHRILKQHPKDAVLHVLSTKLIANEPSVVETVQNELWKH 235 Query: 188 AHLVSTVVSGKEEE---GAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ 244 A + + + + K+ Y D PLS + H+ LA+ RG + +LQLS D Sbjct: 236 AKIRTKPPASPSNDPAADQKYVVYHDFTAPLSRLRDHQILAIRRGVEQKLLQLSYEVDGS 295 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 E C + + R +A + V Sbjct: 296 KIEA-----CMRYAVRRRWPRHGDALPANLLDEAVHEAPG-------------------- 330 Query: 305 DEAINVFARNLHDLLMAAPAG----------------LRATMGLDPGLRTGVKVAVVDAT 348 VFA N L+A PA + +DPG + G+K AV+D Sbjct: 331 ----QVFAENTSRALLAPPASRGGGSSGNNASSRASPPLYLLSVDPGFQAGLKCAVLDVN 386 Query: 349 GKL-VATDTIYPHTGQAAKA-AMTVAALCE------KHNVELVAIGNGTASRETERFYLD 400 G + + T + G A T++ L + N +V +GNG + E + Sbjct: 387 GHVALQPLTTVKYLGNARTTGVRTMSTLLRDVADATQSNTVVVTLGNGHGTHEARDLLRE 446 Query: 401 VQK-QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVK 459 K+ +V EAGASV+S +E A +EFP+ S AVSI RR Q+PL EL+K Sbjct: 447 AAAVATEKLELDIQVVHEAGASVWSVTEAAREEFPNDPPSAIAAVSIGRRWQNPLHELIK 506 Query: 460 IDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQN 519 + P S+G+G YQHDV L L D AVGVD+NT V +L +V GL + +A Sbjct: 507 VPPASLGLGMYQHDVPPADLDDVLHRTSVDAAAAVGVDVNTCRVEILRKVPGLAK-LADA 565 Query: 520 IVAWRDENGQFQNRQQLLK-VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVER 578 I+A R RQ LL V+ LGPK F+ CAGFLRI G PLD + VHPE+Y Sbjct: 566 IMAAR----PLATRQDLLSRVTGLGPKTFQACAGFLRIVDGPEPLDGTLVHPESYDTARW 621 Query: 579 ILAATQQALKDLMGNSSELR-----NLKASDFTDEKFGV------PTVTDIIKELEKPGR 627 +L L + N + +FGV + +++ L Sbjct: 622 LLQTLSWDLLTVPTNLPPRAEWKSCWKDVLNAGSTQFGVSPERMLSVLENLVDSLINVDP 681 Query: 628 DPRP-----EFKTAQFA--------------DGVETMNDLQPGMILEGAVTNVTNFGAFV 668 R + A + + P ++G V N+ +FGAFV Sbjct: 682 RLRQGNDTGSRRGASPRWDGSNCARLPAGLAHDLAALQAACPVRNVQGTVRNLADFGAFV 741 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 D G DGL+HIS + V + G + + ++ V Q +++L + Sbjct: 742 DFGGPHDGLLHISQMMANRVA--LDTLLIGQGIGIDIVSV--QDHKVSLAL 788 >UniRef50_D2QZJ0 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2QZJ0_9PLAN Length = 1147 Score = 387 bits (994), Expect = e-106, Method: Composition-based stats. Identities = 147/385 (38%), Positives = 216/385 (56%), Gaps = 13/385 (3%) Query: 203 AKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHL 262 F+DY+ E + +P HR LA+ RG +++ + AD + E + Sbjct: 357 HAFKDYYAFTEAVGRIPPHRILAINRGERARAIRVKIEADLEAMYRDAEELIVR------ 410 Query: 263 GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 + P + +GV+ ++ LE E+ + + AE A++VF RNL LL+A Sbjct: 411 ----ADHPHADFLRGVLRDALNRLMVPSLEREIRREMTDFAETHAVDVFIRNLRKLLLAQ 466 Query: 323 PAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY--PHTGQAAKAAMTVAALCEKHNV 380 P R + +DPG ++G K+ +D G ++ IY + KA +A + +++NV Sbjct: 467 PVRGRRVLAVDPGFKSGCKLVALDEFGNVLGHGMIYVIGKDDRRQKAKNRLAEIIKQYNV 526 Query: 381 ELVAIGNGTASRETERFYLDVQ-KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVS 439 ++AIGNGT RETE+ DV + VIV+EAGAS+YS S L +E P D Sbjct: 527 SVIAIGNGTGCRETEQLVADVLSNEVAGRDCAYVIVNEAGASIYSTSPLGREELPQYDAL 586 Query: 440 LRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 RGA+SI RRL DPL+E+VKI+P ++GVG YQHD+ L LDAVVE CVN VGVD+N Sbjct: 587 QRGAISIGRRLLDPLSEMVKINPANLGVGLYQHDMKAKHLKESLDAVVESCVNFVGVDVN 646 Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 +AS LL V+G+ + A+ + +R E+G F NR+ L KV G F Q AGFL+I G Sbjct: 647 SASPALLRYVSGMNALTARRVYEYRREHGPFHNREDLKKVPGFGDATFVQAAGFLKILGG 706 Query: 560 DNPLDASTVHPEAYPVVERILAATQ 584 +N LDA+++HPE+Y + R+L Sbjct: 707 ENALDATSIHPESYSIAIRVLEKIG 731 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 82/200 (41%), Positives = 121/200 (60%), Gaps = 5/200 (2%) Query: 2 MNDSF---CRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLET 58 MN ++A ++ ++++ V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ Sbjct: 1 MNQPHRIDLALVARDLHLPVDKIERTVSLLDDGNTVPFITRYRKDQTGGLDEEQIREIQD 60 Query: 59 RLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIA 118 R++ LR L ER+ ILKSI QGKLT +LA+ I A + LEDLYLP+KPK++T +A Sbjct: 61 RVTKLRMLAERKATILKSIESQGKLTPELAEEIQAAPTTKRLEDLYLPFKPKKQTLATVA 120 Query: 119 IEAGLEPLADLLWSDPSHTPEVA--AAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 + GLEPLA + + ++ AA +V D+ + L G ++L ERF+E+A L Sbjct: 121 RQRGLEPLAREILEADAAATDLLVRAADFVSPDRELNSAAEVLLGVGHLLAERFSENAEL 180 Query: 177 LAKVRDYLWKNAHLVSTVVS 196 ++R K LVST + Sbjct: 181 RGRLRKIFQKTGKLVSTKIE 200 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 63/178 (35%), Positives = 93/178 (52%), Gaps = 5/178 (2%) Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDE-KFGVPTVTDIIKELEKPGRDPRPEFK 634 V+ + + + + +E + G + DI+ L+KPG DPR Sbjct: 842 VQLVGIPAATDESLARKIAEQAAAVDVKKLAEELQIGQHLLEDILATLKKPGLDPRDSLS 901 Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV 694 G+ + DL+PGM L G+V NV +FG FVDIG+ GLVHIS L+++++ DPH V Sbjct: 902 APLLRRGIMKLEDLEPGMELSGSVLNVVDFGVFVDIGLSDSGLVHISRLADRYIRDPHEV 961 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNER-PQNNRPAAKPRGR 751 V GD++KV V+EVD R+R++LT PG +R ER P+ R PR + Sbjct: 962 VGVGDVLKVWVVEVDKSRRRVSLT---AIAPGSEKPQRPPRGERGPRQPRGDRGPRPQ 1016 >UniRef50_Q4HYQ4 Transcription elongation factor SPT6 n=8 Tax=Leotiomyceta RepID=SPT6_GIBZE Length = 1408 Score = 387 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 150/858 (17%), Positives = 309/858 (36%), Gaps = 165/858 (19%) Query: 19 EQVDAAVRLL-DEGNTVPFIARYRKEITGG------------------------LDDTQL 53 + V + + VP++ ++RK+ L+ L Sbjct: 324 KAVGKVLEFFIVDEVEVPYVFQHRKDYLLHTRKTRNPNRDDPDAPEYVISADKLLNQDDL 383 Query: 54 RNLETRLSYLRELEERRQAILKSISE-QGKLTDD--LAKAINATLSKTELEDL--YLPYK 108 + R ++R A+ K++ +G D + + I + EL+DL YL ++ Sbjct: 384 WKILELDIKFRSFVDKRNALEKTVDNLKGMEIHDAMVDEMIPEATTMEELQDLQDYLHFQ 443 Query: 109 --PKRRTRGQIA----------------------------IEAGL--EPLA-DLLWSDPS 135 + + +A G+ + LA + L Sbjct: 444 YGQQLKDLAALAGNLSLTKRPGSKSNLLERVRQGKAYGFVRAYGISADQLAKNALRHGKK 503 Query: 136 HTPEVAAAQYVY-----ADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL 190 TP+ A + D + + AR + E + R+ ++ A + Sbjct: 504 VTPDDDAQYPMDLADSLIDDVFSTGDQVISAARQMYSEELFASPRMRKHFRNSYYQAAEI 563 Query: 191 VSTVVSGK----EEEGAKFRDYFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQ 244 ++ + + ++ ++ + L M + EG++ + L+ + Sbjct: 564 SCRRTEKGLRRIDDSHPYYEIKYLQNQAIADLVHQPELFLKMMKAEEEGLVTIKLDMPAR 623 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 +D ++ ++ ++ R RK V+ + K+ + + +R + Sbjct: 624 YD--FRQHLYQEFESENFSDRA--EQWREERKKVLDLAYP-KLEKIIAKNVKEVIRTFCQ 678 Query: 305 DEAINVFARNLHDLLMAAPAGLR-ATMGL------------DPGLRTGVKVAVVDATGKL 351 DE + + L AP + +G DP A V+ G++ Sbjct: 679 DEVLKMCREEYAKRLDQAPYKPKGMILGTTPRVLVLSNGMSDPARDPIC-WAWVEEDGRV 737 Query: 352 VATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ--------- 402 + + + + + L ++ +++ + +A ET + D++ Sbjct: 738 IEQGKLG-NLARDERQREEFEELVKRRRPDVIGVSGWSA--ETTKLVRDLEGLVNEKGLM 794 Query: 403 ---------KQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 + + V+V++ A +Y S A E P L+ R V++AR +Q+P Sbjct: 795 GPEFEDPDTNDYRTEPLEVVVVNDEVARLYKDSPRALAEHPSLNPITRYCVALARYMQNP 854 Query: 454 LAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLL 506 + E + D S+ Q+ + +LA+ LD+ + D VN GVD+N A + LL Sbjct: 855 MKEYAALGKDVSSLSYHPCQNLLPADKLAKYLDSAMVDMVNLCGVDINEAMNDTYTANLL 914 Query: 507 TRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLL------KVSRLGPKAFEQCAGFLRINHG 559 V+GL A +++ + N G R +L+ K+ +GP+ + CA FL I + Sbjct: 915 PYVSGLGPRKATSVIKAINANGGAVGTRDELVGDPDSGKLPVVGPRVWNNCASFLFIEYE 974 Query: 560 -----DNPLDASTVHPEAYPVVERILAATQQALK-------------------DLMGNSS 595 +PLD + VHPE Y + ++ A + + M Sbjct: 975 ATNPSSDPLDNTRVHPEDYELGRKMAADALELDEEDVKGETDENGPGAIVRKLFKMDEQD 1034 Query: 596 ELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ET 644 ++ L ++ ++ + T+ I EL+ P + R F ++ ET Sbjct: 1035 KVNELVLEEYAEQLERNYSQRKRATLETIRAELQAPYEELRRNFALLSASEIFTMFTGET 1094 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + L GMI+ V V + A V + +G V +S++ V+ +G + K Sbjct: 1095 KHTLCEGMIVPVNVRVVKDDFAIVKLDCGIEGRVEGHEVSHR--SSIKEVLSSGQTSQAK 1152 Query: 705 VLEVDLQRKRIALTMRLD 722 +L+++ + L+MR D Sbjct: 1153 ILDINYKDFMAKLSMRED 1170 >UniRef50_B6K7G0 Transcription elongation factor Spt6 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K7G0_SCHJY Length = 1372 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 156/880 (17%), Positives = 304/880 (34%), Gaps = 143/880 (16%) Query: 10 IAGEIQARPEQVDAAVR----LLDEGNTVPFIARYRKEITGG-----------LDDTQLR 54 I+ E+ RP V+ +R + + VPF+ +R++ L+ L Sbjct: 307 ISEEL--RPAYVNCILRVLHFFIKDSYEVPFVWHHRRDYLVYHDREKGTIVPMLNQNDLW 364 Query: 55 NLETRLSYLRELEERRQAILKSISEQGKLTD---------------DLAKAINATLSKTE 99 + S L +++ + K + G + D+ + TE Sbjct: 365 RIFFSCSTYYFLIHKKKELEKLCNAIGIQDEFFSSALDDIVDSPFFDITDSFEFANDLTE 424 Query: 100 LEDLYLPY-----------------------------KPKRRTRGQIAIEAGLEP--LAD 128 YL + K ++ + + G+ Sbjct: 425 ----YLHFFYSEQIRDHFSLMGNGLRRPHVSKYAFYEKTRKSSLYNLVKAFGITATHYGL 480 Query: 129 LLW--------SDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 L DP+ P V A QYV + + D L AR I E + Sbjct: 481 NLIQEEKLYPVEDPAVPPRVLAEQYVT--EELKDVDHVLSRARRIFAEEIFHEPQFRRHF 538 Query: 181 RDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQ 236 R L A + +E+ ++ + + L + L M + EG+++ Sbjct: 539 RVKLLTLAKVDIVRTQKGLRKIDEDHPFYKFKYLKDQNLLHIDPVLFLQMLKAEEEGLIK 598 Query: 237 LSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELM 296 +++ + + +S + + D+ + R+ V+ ++ + Sbjct: 599 INIKF-FELQDDNFKSMLDFMTSDNCSDVAK--AWNEQREMVLRDVLDRTTQ-YMPALIK 654 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGL----------RATMGLDPGL---RTGVKVA 343 R +E + L++ L AP + + G V Sbjct: 655 EMCRSNHLNELGMLCRNQLYNKLDQAPYKPSGKNYELGTIPTVVAVSNGQGGPSDAVLCV 714 Query: 344 VVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK 403 V+ G+ T + + + A EK E++ + + S + Sbjct: 715 YVNDLGEPEETLKLTDFHDPTNQ--VMFAEFIEKVKPEVIGVSGMSVSANRVKL-NVTTA 771 Query: 404 QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--D 461 K ++V++ A +Y+ SE AA+E P L R V++AR +Q PL E + D Sbjct: 772 LQSKDPVDVIMVNDEVARIYTNSERAAEELPALPSLGRYCVALARYVQHPLLEYAALGRD 831 Query: 462 PKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMM 516 S+ ++QH + Q L R L++ + D N VG+D+N A +L ++GL Sbjct: 832 IMSLSFHKWQHLLPQEMLWRYLESALVDVSNLVGIDINEAVNNKYEASILPYISGLGPRK 891 Query: 517 AQNIVAWRDEN-GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG----DNPLDASTVHPE 571 AQ ++ + G+ R L+ + L K F CA FL I + + LD++ +H E Sbjct: 892 AQALLKKIAAHGGRLDTRSDLITKTILTGKIFINCASFLYIPNEDLPKMDILDSTRIHNE 951 Query: 572 AYPVVERILAATQQALKDLM----------------GNSSELRNLKASDFTDE------K 609 Y + ++ + + ++ + +L +L ++ D+ Sbjct: 952 DYELARKMASDALELDEEDIEEYESQKGVVYHLITSNEVDKLDDLVLEEYADQLEREFHH 1011 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ-----PGMILEGAVTNVTNF 664 T+ I +EL+ P + R F ++ + ++ P I+ V VT+ Sbjct: 1012 LKRNTLERIRRELKDPYGERRNLFHILTPSEIFLMLTGIELTDLPPNTIVPVNVKRVTSR 1071 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 V + DG + +S+ + P +++ G V+ +L +D L+MR Sbjct: 1072 YVAVKLDCGIDGNITAEEVSDDHIP-PPQLLQTGQTVEAVILTLDEVNFTAELSMR--PY 1128 Query: 725 PGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDA 764 T + + + A+ R +E A A A Sbjct: 1129 AIRTASETSKYSFSAWDWDFEAEKRDKEKMLAETQAEQRA 1168 >UniRef50_B0CSK5 Transcription elongation factor SPT6 n=2 Tax=Agaricales RepID=B0CSK5_LACBS Length = 1406 Score = 380 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 159/888 (17%), Positives = 295/888 (33%), Gaps = 160/888 (18%) Query: 27 LLDEGNTVPFIARYRKEITGGLDD------------TQLRNLETRLSYLRELEERRQAIL 74 L E VP+I ++++ D +L + + R L ERR+A+ Sbjct: 333 LFVEEYEVPYIWVHKRDYICHFDASEMRTRFELLSLNELWRIHSLGQKYRSLVERRRALS 392 Query: 75 KSISEQGKLTDDLAKAINATLSKTEL-----EDLYLPYKPKRRTRG-------------- 115 S D + I + E+ E L + YK K+ + Sbjct: 393 ASYERLQVKDDYYEEEIQPQIDGVEVVTDATEWLAMKYKDKKLSSAVEFRFHDDDEPDTT 452 Query: 116 ---------------------QIAIEAGLEP---LADLLWSDPSHTPEVAAAQYVYADKG 151 ++A G+EP + + + S H E + + Sbjct: 453 KKRKMPSRISAYEVVKRSIVSKLAQGFGIEPHHVVLNFMASHHVHFVEDQELNPIVFAEQ 512 Query: 152 VADT--------KAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----E 199 AD + L AR IL +D L +++R + A + + Sbjct: 513 FADPDPSKAQAPEDILVRARMILSTEIGKDPLLRSQIRKIFKEEAQISVEPTERGITKID 572 Query: 200 EEGAKFRDYFDHHEPLSTVP-SHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQII 258 + + + H + + + S + L + E ++ +S++ + E Sbjct: 573 DNHPYYNFKYLHRKSIKDMQDSAQFLLILAAEAEHLVNVSISIPNAAISSFERRLNEAFA 632 Query: 259 MDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDL 318 D+ + + R VV + ++ +RE ED + L Sbjct: 633 SDNFSDSAKS--WNVERSRVVQEVMELHLIPAGIKWTREYLREEVEDYLAAQCSNRLRAR 690 Query: 319 LMAAPAGLR---------ATMGL-----DPGLRTGVKVAVVDATGKLVATDTIYPHTGQA 364 + AP +R + + + DP + + + +D G++ I Sbjct: 691 VDVAPYLVRELKDGEIACSVLAISWGKGDP-HKDAITLVFMDEAGRMREYTKI--DNLHD 747 Query: 365 AKAAMTVAALCEKHNVELVAIGN-----------------GTASRETERFYLDVQKQFPK 407 + ++ +LV +G GT + E + + Sbjct: 748 TEMIDEFLDFVKRRKPDLVVMGGFSMSTMKLTRLVKTTLHGTGPSQGETGWGNPSANEQV 807 Query: 408 VTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSI 465 + V + A +Y S AA EF L + + V +AR Q PL E + D +I Sbjct: 808 FDIPVIYVFDDVARIYQHSRRAADEFGALSPTAKYCVGLARYTQSPLNEFAALGSDITAI 867 Query: 466 GVGQ-YQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLTRVAGLTRMMAQN 519 + + QH V + +L + V+ D N GVD+N A LL V GL AQ Sbjct: 868 TLSEDDQHLVPKEKLLSAFERVLVDVTNKTGVDINRAVADAYYQNLLPFVCGLGPRKAQV 927 Query: 520 IVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD---------------NPL 563 ++ G NR Q ++ L K F AGFLRI +PL Sbjct: 928 LIKKIGSLGGNLVNRDQFIEGGLLTTKIFLNAAGFLRIAQEHDPKPTKHRHDGETAPDPL 987 Query: 564 DASTVHPEAYPVVERILAATQQALKDLM----------------GNSSELRNLKASDF-- 605 D + +HPE Y + ++ + ++ + N +L L +F Sbjct: 988 DDTRIHPEDYELARKMATDALELDEEDIHDEHPSHVVNLIMTDPDNERKLSELNLDEFAI 1047 Query: 606 ----TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 + T+ I EL +P + R +F + + ET L+ G+I+ Sbjct: 1048 SLYEANHDQKRHTLNVIRDELLRPFAEQRNKFVLPSDWEILTMLSGETPRTLEVGLIVTT 1107 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL--EVDLQR-- 712 V +T V + +G++ LS+ + P +VK G + ++ + D+++ Sbjct: 1108 QVQRLTKSFINVRLDSGIEGVIATQYLSDSG-DLPDNLVKKGQTIPGVIVERKFDMEQDS 1166 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSA 760 + L+ R +E R + + K + A+ Sbjct: 1167 FFVELSSRQEELSKGDEQYRRVKIDPMWDGVRCEKDKDMLARKKRAET 1214 >UniRef50_A3ZZ79 Ribosomal protein S1-like RNA-binding domain protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZ79_9PLAN Length = 1043 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 159/413 (38%), Positives = 227/413 (54%), Gaps = 15/413 (3%) Query: 181 RDYLWKNAHLVSTVVSGKE--EEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLS 238 R L + +E ++ F+DY+D+ EP+S +P HR LA+ RG +++ Sbjct: 297 RRALQEQRRDKRRKQKDRERSKKEKAFKDYYDYREPISKIPHHRVLAINRGDRTRFIRVK 356 Query: 239 LNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGT 298 + D E + + K + + +L LE E+ Sbjct: 357 IECDWDRLFALAEE----------TAIPADHSQTDFLKPCLRDGLQRLMLPSLEREIRRE 406 Query: 299 VRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIY 358 + E AE+ A++VFA NL LL+ P R M +DPG R+G K+ +D G ++ I+ Sbjct: 407 LTEHAEEHAVDVFACNLRKLLLQPPVSSRRVMAIDPGFRSGCKLVALDQFGSILEQGVIH 466 Query: 359 PHTGQAAKAA--MTVAALCEKHNVELVAIGNGTASRETERFYLDVQ-KQFPKVTAQKVIV 415 + A + + +H V++VAIGNGTA RETE + K VIV Sbjct: 467 LIGPEDRVARGRQRLIEMIRQHAVDIVAIGNGTACRETENLVASIISKDITDREVVYVIV 526 Query: 416 SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVS 475 +EAGASVYS SEL +EFPD D ++RG +SI RRL DPL+ELVKI+P +IGVG YQHDV Sbjct: 527 NEAGASVYSTSELGREEFPDFDATVRGTISIGRRLLDPLSELVKINPSNIGVGLYQHDVK 586 Query: 476 QTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 L LD VVE CVN VGVD+N AS LL+ V+GL ++ A+ + +R +NG F +R++ Sbjct: 587 SKHLKETLDNVVESCVNYVGVDVNQASPALLSYVSGLNQLTARRLYEYRRQNGPFTSREE 646 Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALK 588 KV+ G AF Q AGFL+I G+NPLDA+ +HPE+Y V E++LA + Sbjct: 647 FKKVAGFGESAFVQAAGFLKIRDGENPLDATWIHPESYEVAEKVLAKLDATID 699 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/205 (43%), Positives = 122/205 (59%), Gaps = 2/205 (0%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRL 60 + S I+A E+ +QV V LLD+GNTVPFI RYRK+ TGGLD+ Q+R ++ R Sbjct: 3 ITVSSDLSIVARELGLPVDQVQRTVELLDDGNTVPFITRYRKDETGGLDEEQIRKIQARS 62 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 + LR+LEER+Q ILKSI QGKLT+ LA I + LEDLYLP+KPK+++ A + Sbjct: 63 AALRQLEERKQTILKSIESQGKLTEKLADKIQKAPTTKLLEDLYLPFKPKKQSLATQARQ 122 Query: 121 AGLEPLADLLWSDPS--HTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLA 178 GLEPLAD + + AA +V A+ + D A L G R+IL E FAE+A L Sbjct: 123 RGLEPLADEVMAGNEAAADLPARAAAFVSAENDLPDVAAVLQGVRHILAEEFAENAILRG 182 Query: 179 KVRDYLWKNAHLVSTVVSGKEEEGA 203 ++R +WK LV+ + + Sbjct: 183 RLRKLMWKTGTLVTLRIEQAADASD 207 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 66/190 (34%), Positives = 95/190 (50%), Gaps = 18/190 (9%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + + G DI+ L +PGRDPR +F F G+ + DL+PGM L G V NV Sbjct: 825 PEFAAELEVGEHLTRDILNSLSRPGRDPRADFPPPLFRRGIMKLEDLRPGMELSGTVLNV 884 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM-- 719 +FGAFVDIG+H G+VHIS L+N++V DPH VV GD++ V V+E+D R+R++LT Sbjct: 885 VDFGAFVDIGLHDSGMVHISRLANRYVSDPHEVVSVGDVITVWVVEIDKDRRRVSLTAIE 944 Query: 720 ------------RLDEQPGETNARRGGGNERPQNNRPA----AKPRGREAQPAGNSAMMD 763 + E R G RP N+P KP+ + Sbjct: 945 PGTEKAIPAADEKQRVDRPERAKRPPRGKNRPGGNKPQHAGHGKPKAKTFVAKSKPTPKK 1004 Query: 764 ALAAAMGKKR 773 ++ AM + + Sbjct: 1005 PISEAMKEGK 1014 >UniRef50_B2VYQ2 Transcription elongation factor spt6 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2VYQ2_PYRTR Length = 1416 Score = 363 bits (932), Expect = 1e-98, Method: Composition-based stats. Identities = 163/905 (18%), Positives = 306/905 (33%), Gaps = 172/905 (19%) Query: 18 PEQVDAAVRLLD-EGNTVPFIARYRKEITGG------------------------LDDTQ 52 + V + ++ E VPFI +RK+ L+ Sbjct: 318 EKAVRKVLEFINIEDYEVPFIFNHRKDYLIHAPSDHDDYDDIDNPPPMDARPERLLNQAD 377 Query: 53 LRNLETRLSYLRELEERRQAILKSISEQ-----GKLTDDLAKAINATLSKTELEDL--YL 105 L + R E+R A+ ++ ++ + N + E+++L YL Sbjct: 378 LWEVFDLDLKFRAFAEKRDALRQNYENLKAVYSEITDTEIEELSNRAATIEEIQELQDYL 437 Query: 106 PYK---------------PKRRTRG-------------QIAIEAGLEP--LADLLWSDPS 135 YK KR Q+ G+ P A + + Sbjct: 438 HYKYSQELNEVRQELNGTQKRANNARNFFDKLRSGKALQLVKAIGITPDDFAKKVDGTNT 497 Query: 136 HTPEVAAAQYVYADKGVADTKAALDGA------RYILMERFAEDAALLAKVRDYLWKNAH 189 + Y + +A GA R + ++ + L +R ++NA Sbjct: 498 GAHTIEDPPYKVEELADQLAEAPETGATLLRSTRLLFVQDLQMCSRLRRYLRASFYQNAE 557 Query: 190 LVSTVVSGKE----EEGAKFRDYFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADP 243 + E+ + + + L M + +EG++Q+ + Sbjct: 558 IDCLRTDKGMRTITEDNPYYEFKYLRRVTFGDLQGRPDLFLKMLKAESEGLMQVRITMGN 617 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 K ++I+ + + + ++ RK ++ K+ + + T+R R Sbjct: 618 --YPNFKSRLHKEIVSEGVSD--VSDTWNALRKELLDTAL-DKLQGVIANGVKETLRARC 672 Query: 304 EDEAINVFARNLHDLLMAAPAGLRAT-MGLDP---------GLR-TGVKVAVVDATGKLV 352 EDE N ++ L AP L+ +G P G+R + A V+ G+++ Sbjct: 673 EDELAASARENYYNKLDQAPYKLKTAPLGSVPNVLCLSNGSGMRGDAIMWAYVENDGRVL 732 Query: 353 ATDTI-------YPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQK-- 403 + + + + ++ +++ + S ET + Y D+Q+ Sbjct: 733 EHGRLIDMRLGNPERNIPEGQDVEKLVDVIQRRRPDVIGVSGF--SVETRKLYKDIQEII 790 Query: 404 ----------------QFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIA 447 + + ++V++ A +Y S A EFP R +++ Sbjct: 791 NQRGLTGPAYEDEDTGEERNEPLEIILVNDEVARLYHTSARAIAEFPKHPALTRYCIALG 850 Query: 448 RRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL-----NT 500 R LQ+PLAE + D SI Q + Q +L +L+ + D VN VG+DL + Sbjct: 851 RYLQNPLAEYASLGKDIVSIPFIPNQTLIPQDKLLDRLETAMVDMVNLVGIDLPETYDDK 910 Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQLLKVSR-------LGPKAFEQCAG 552 L+ V GL A ++ N + +R LL VS +GPK F+ CA Sbjct: 911 YLSKLIPYVCGLGPRKADRLIKAIQANSDEILSRFDLLGVSESRDLKAAMGPKVFQNCAS 970 Query: 553 FLRINHG-----DNPLDASTVHPEAYPVVERILAATQQALKDLMG--------------- 592 FL I + + LD + VHPE Y + +++A ++ + Sbjct: 971 FLYIPYDATEESSDYLDYTRVHPEDYDLARKMVADALNMDEEDVKAETDEGGPSAVVRKM 1030 Query: 593 ----NSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 + + +L D+ E + T+ I EL+ P + R F + Sbjct: 1031 VREETTDLVNDLALEDYAAEIERNFGQRKRATLETIRAELDNPYEEIRQMFAMLSGDELF 1090 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAF-----VDIGVHQDGLVHISSLSNK---FVEDPHTV 694 + + EG V VT F V + + V S ++P V Sbjct: 1091 TMLTGETKDSLYEGMVVPVTIRRTFPDHIEVKLECGIEAGVSESEFPEGVGGGGQEPRHV 1150 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNERPQNNRPAAKPRGRE 752 IV+ ++L ++ + L++R L QP + R G K +E Sbjct: 1151 FSTHQIVRARILYLNRKALTAQLSLRGDLIRQPEKKRFERAAGEWDEAQEAQDKKAAEKE 1210 Query: 753 AQPAG 757 + A Sbjct: 1211 KEVAT 1215 >UniRef50_B3S561 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S561_TRIAD Length = 1541 Score = 362 bits (930), Expect = 3e-98, Method: Composition-based stats. Identities = 141/934 (15%), Positives = 275/934 (29%), Gaps = 241/934 (25%) Query: 21 VDAAVRLL-DEGNTVPFIARYRKE-ITGGLDDTQLRNLETRLSYLRELEERRQAILKSIS 78 V + L+ +EG +PFIA YRKE L L + R+Q + K + Sbjct: 310 VREILALIRNEGLEIPFIAHYRKEIYRHSLQVDDLWRIYNWDIKWMYFSRRKQNMAKLFA 369 Query: 79 E-------QGKLTD------------DLAKAINATLSKTELEDLYLPY------------ 107 + + K T + + + EL+D+Y + Sbjct: 370 KVQQYQYDKAKNTHDFSTFNAKIIDAEDTARLEECNTYEELQDVYTHFLLYHHKELEDLR 429 Query: 108 ----------------------------KPKRRTRGQIAIEAGLEPLADLLWSDPSHTPE 139 + +RR + + LA P + Sbjct: 430 NDASKKTTNSDDKNQSDNNEKRSGESIRRLRRRNFYTRCEDNKISHLALKFGLSPERFGK 489 Query: 140 VAAAQYV-----------------YADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 Y Y K +A LD A Y + + + D + VR Sbjct: 490 NVIESYQINEPTQYEIDPNTTARDYITKAFPTVEAVLDAAVYTVAVQLSRDPLVRRAVRL 549 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNAD 242 ++ A + + + EG + + + + Sbjct: 550 AFYERAKISCRPTKRGK----------------------------KAEKEGFITHTFSVE 581 Query: 243 PQFDEPPKESYCEQIIMDHLGLRLNN--APADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 P SY +++ + ++ + R V + EL + Sbjct: 582 PSASSWG--SYADELKQYYFVDGFSDLIKEWNELRGRAVQKAVEDVLFEEFRKELQEKLL 639 Query: 301 ERAEDEAINVFARNLHDLLMAA---------------PAGLRATMGLDPGLRTGVKVAVV 345 + + I N+ + A P + V+ Sbjct: 640 RESYEYVIKECCCNVRKRINVASFKIGSENDEDDEMEPYQRIMSFAFVSDRDIASYACVI 699 Query: 346 DATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRET-------ERFY 398 D G++ K + L +AI R+ E Sbjct: 700 DGHGEI--------------KEIKLIKGLIVSKQPVAIAISAS--CRQATGVKKDLEGIV 743 Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 ++Q + ++ ++ +S+ A EFP+ L A+S+AR +Q+PL EL Sbjct: 744 NELQSEEDLPPISVELIDPCIPRLFESSKRAKNEFPEYPPLLCHAISLARYMQEPLLELS 803 Query: 459 KI------DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV-----PLLT 507 ++ + + + Q ++ + L L +C+N +G+DLN LL+ Sbjct: 804 QLLTSDDEEILCLRLHILQAEIPKPDLMEALYIEFINCINDIGIDLNLCLTNERYSSLLS 863 Query: 508 RVAGLTRMMA-QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------ 560 V GL A + + N + +NR+ L+ +GP F CAGF++I Sbjct: 864 FVCGLGPRKATALLKLLKKGNLRLRNRKSLVTECGMGPNLFVNCAGFIKIPTNKVDDSDY 923 Query: 561 -NPLDASTVHPEAYPVVERILAATQQALK------------DLMGNSSELRNLKASDFTD 607 LD + +HPEAY ++ + D++ +L++L F + Sbjct: 924 AEILDTTRIHPEAYDWARKMAIDALDYDESAEEINQATVVHDIIDQPDKLKDLDLDAFAE 983 Query: 608 EKF------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 E T+ DI +EL ++ R F + + ET L G ++ Sbjct: 984 ELKRQGFGNKSVTLYDIREELTHRYKECRQPFDSLSPGEVFYLLVDETPESLCYGQLITC 1043 Query: 657 AVTNVTNF---------------------------------------------------G 665 V + + G Sbjct: 1044 RVIGIVHRRPTKDQIDRVNPERDPISNTWTCPLCLFDSFKELSEVWRHIDNNECKGIAIG 1103 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 V + G + ++S+K + P VK G ++ +++++++ + + L+ + + Sbjct: 1104 VKVILDSGITGFISTKNISDKQIRTPEERVKIGMVIHCRIIKLNIDKLSVDLSCKSSDLA 1163 Query: 726 GETNARRGGGNERPQNNRPAAKPRGREAQPAGNS 759 N + A + Sbjct: 1164 DHDNQFSKPKDNYYDTEIEKADMEEDVKKTKKQQ 1197 >UniRef50_A8P3Z1 S1 RNA binding domain protein, putative n=1 Tax=Brugia malayi RepID=A8P3Z1_BRUMA Length = 536 Score = 358 bits (918), Expect = 6e-97, Method: Composition-based stats. Identities = 169/522 (32%), Positives = 263/522 (50%), Gaps = 70/522 (13%) Query: 223 ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPAD-SWRKGVVSW 281 LA+ R ++G++ + D + I H GL+LN + V Sbjct: 53 ILALERASSKGIINWKIVVD------------DSIASIHPGLKLNFHLNHTDLLRKAVQD 100 Query: 282 TWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVK 341 + + ++ +E ++ + +RAE+ AI+ FA+NL +LL+ AP A + +DPG G K Sbjct: 101 STKRFLIPSIERKVRRKLLDRAENSAIDCFAKNLRELLLTAPLKDYAVLAIDPGYSNGCK 160 Query: 342 VAVVDATGKLVATDTIYPHTGQAAK------AAMTVAALCEK--HNVELVAIGNGTASRE 393 A+V+ +G L+ T Y A A + L K ++ ++AIGNGTASRE Sbjct: 161 CALVNDSGDLLQTAVFYFRRLNAKNWCPDERAEEILKTLVSKALNSPFVIAIGNGTASRE 220 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 T+ F + ++ + A+ +VSE GAS+YS +ELAA+E +D++LR AVS+ARR+ DP Sbjct: 221 TQVFIASLIQR-GVIAAKFCVVSECGASIYSTTELAAEELSGIDINLRSAVSLARRIIDP 279 Query: 454 LAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT 513 ++E VKI PK +GVG YQH V++ +L LD VV +CV+ VGVD+N AS+ +L RV+GL Sbjct: 280 ISEYVKIAPKHLGVGLYQHSVNEKRLDEMLDIVVRECVSNVGVDVNVASLQVLQRVSGLN 339 Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG-------------- 559 + A NI+ +R +N ++R++L K++ +GPK FE CAGFL + +G Sbjct: 340 KKTAANIIKYRQDNAGIKSREELKKINGIGPKCFEHCAGFLYVYNGKRLNAPAKKKIKLS 399 Query: 560 --DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 NPLDA+ VHPE+Y + +++ + NL E+ + Sbjct: 400 KEFNPLDATPVHPESYQIAKQLSISLILEYAGADLTHIGQNNLYQMLAVIEERIRERGPE 459 Query: 618 ---IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + + L P V M L+ G ILEG V N NFG F+DIGV+ Sbjct: 460 WLSVWELLSNPFVRKNAPVLLTN----VLEMKSLKVGDILEGVVRNHANFGIFIDIGVNS 515 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 VKV++ +++ R+RI Sbjct: 516 S-------------------------VKVRITAINMDRRRIG 532 Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 36/157 (22%), Positives = 60/157 (38%), Gaps = 21/157 (13%) Query: 14 IQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLREL--EERR- 70 + + V+L ++G VPFIARYR+ + G LR+ + + ER Sbjct: 1 MGFPSNVARSLVQLFEDGCEVPFIARYRRHLIDGATPDDLRHAVETFKNAKHILALERAS 60 Query: 71 -----------QAILKSISEQGKL------TDDLAKAINATLSKTELEDLYLPYKPKRRT 113 + SI KL TD L KA+ + + + + + K Sbjct: 61 SKGIINWKIVVDDSIASIHPGLKLNFHLNHTDLLRKAVQDSTKRFLIPSIERKVRRKLLD 120 Query: 114 RGQ-IAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD 149 R + AI+ + L +LL + P V A Y++ Sbjct: 121 RAENSAIDCFAKNLRELLLTAPLKDYAVLAIDPGYSN 157 >UniRef50_D2VJC0 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VJC0_NAEGR Length = 1296 Score = 355 bits (911), Expect = 4e-96, Method: Composition-based stats. Identities = 149/885 (16%), Positives = 303/885 (34%), Gaps = 154/885 (17%) Query: 15 QARPEQVDAAVRLLDE-GNTVPFIARYRKEITGGL-------DDTQLRNLETRLSYLREL 66 E + +R + + +P+IA+Y+KE + +D L + L Sbjct: 235 NLFVETIIKVLRFILQLRYDIPYIAQYKKEDFEHILYKDSFGNDRDLWKIFEWDEKWCIL 294 Query: 67 EERRQAILKSISEQGKLTD-DLAKAINATLSKTELEDLYLPY----------------KP 109 + ++ + + + + + E+ D +L + +P Sbjct: 295 QSKKSKLKLLYDNAKSVIPTEYLAYFEGSETLDEINDYHLHFTTVLNEESENQLTTLKRP 354 Query: 110 KRRTRGQIAIEAGLEPLADL-----------------LWSDPSHTPEVAAAQYVYADKGV 152 +R +A + GL LA + H + A+A V+ + Sbjct: 355 TKRDLYTMAKKEGLAILASQMSLSSYQYAENLESTFQIVETQDHALDPASAAEVFKTRTF 414 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEG---------- 202 ++ L GAR+I + A + + VR N+ + + + Sbjct: 415 ESIESVLGGARHICAFQIAHEPKIRQLVRRCFENNSTIKVKLTKKGKSVEGSDIISLLED 474 Query: 203 -----AKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQI 257 KFRD + H + L + + N G++++SL + + + ++ + Sbjct: 475 GRTMFTKFRDEWAAHVRYAHDNKESFLKLLKYENLGLIKVSLFLEDRHFDGLLKADVLYL 534 Query: 258 IMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHD 317 H + + R ++ + + ++ + +R +A D ++ NL Sbjct: 535 SQKHSQI---ATLWNEQRIKIIEEA-KGILNKTIQHSVKTILRNKAADFVSDLCESNLTK 590 Query: 318 LL-MAAPAGLR---------------------ATMGLDPGLRTGVK--VAVVDATGKLVA 353 +L +P G + PG G K ++D G ++ Sbjct: 591 MLFEESPYGNNPRAKFDYDEFFEDEKPRPTKYKILSCVPGGEEGEKTTWVMLDENGTMID 650 Query: 354 TDTI---YPHTGQ---------AAKAAMTVAALCEKHNVELVAI--GNGTASRETERFYL 399 +PHT +V + H +VA+ G ++ + + Sbjct: 651 KKVWPIGHPHTTGNTSDSDRQLIDSMVKSVNDMIASHQPSVVALAACGGLIFKKMKEAFE 710 Query: 400 DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVK 459 ++ IV + A +Y S A E+P + +R A+S+ RRL+DPL E+ Sbjct: 711 RTKQGGTIFNINYEIVPDDIARIYENSSRATNEYPQENNVVRRAISVGRRLRDPLTEICG 770 Query: 460 I----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVA 510 + + + Q V + QL + L+ + VN VGV++N P L ++ Sbjct: 771 LFNNEELLCYKFHELQDMVPKEQLVKSLEKSLVRVVNRVGVEINRIVLFPQLQPTLRFLS 830 Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFL------------RINH 558 GL A+ ++ + +R+ + + GFL + Sbjct: 831 GLGPRKAELLINKIKQEDSVSDRESINNILNEQRNVALNSIGFLIVRRPPTIAARDSMAR 890 Query: 559 GDNPLDASTVHPEAYPVVERILAA-------TQQALKDLMGNSSELRNLKASDFTDEKFG 611 +DA+ VH +YP+ +++ + + + L L + DE Sbjct: 891 AFKVIDATRVHLLSYPLAKKMAEDGLETENLKTEKIHKIFKKPQALDELDLDAYADELEK 950 Query: 612 VP------TVTDIIKELEKPGRDPRPEFKTAQFADGV-------ETMNDLQPGMILEGAV 658 T+ DI +EL+ P +DPR EFK+ D ET L PG + V Sbjct: 951 RNYGKTHITLKDIKEELKYPFKDPRYEFKSINNDDEKVFELVTHETKKSLAPGQQVFATV 1010 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 V F + G++ +L N+ V ++ G+ ++ V+ ++ ++ L Sbjct: 1011 VTVGERIIFCKLDNGLYGVI---ALYNRNVS-----LREGEERYFEIERVEYKQFKVHL- 1061 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMD 763 P + + +R +A + R + + D Sbjct: 1062 -----VPPKEDIYAPKAESIMDQHRKSAPSKKRFHRQIDHPQFKD 1101 >UniRef50_UPI0000E4A210 PREDICTED: similar to Spt6, partial n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E4A210 Length = 913 Score = 354 bits (908), Expect = 9e-96, Method: Composition-based stats. Identities = 126/660 (19%), Positives = 229/660 (34%), Gaps = 104/660 (15%) Query: 110 KRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKG-----------------V 152 R++ + +A L LA P E Y D Sbjct: 216 SRKSMYALCQDAKLTGLAAKFGLTPEQFGENLRDNYQRHDPEQHQDSPLEVATDYLSSKF 275 Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEE----GAKFRDY 208 D + L ARY++ + A D + VR ++ A + +E F Sbjct: 276 KDEEGVLQAARYMVALQIAHDPLVRQCVRQTYYERAKISVRPTKKGIKEIDESHPIFGSK 335 Query: 209 FDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQ---FDEPPKESYCEQIIMDHLGLR 265 + ++ + + + L + + + ++ ++++ D +Y E++ + Sbjct: 336 YLKNKQVKDLLQDQYLKLVQAEKDKLITMTMSIDMAQGTSTSYTSTTYFEEMKQLYYLDE 395 Query: 266 LNN--APADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAP 323 + R G + + + L EL + A++ I + + L P Sbjct: 396 FRTEVQAWNKERSGALEMALQSILYPQLAKELKTKLVAEAKEGIIKQCCTKMFNSLKVMP 455 Query: 324 AG-------------------LRATMGLDP--GLRTGVKVAVVDATGKLVATDTIYPHTG 362 MG + ++D+ G++ + PH Sbjct: 456 HQVDQPMEEDEDDYMDGNSRMGLRVMGFSFTSDMDNAAFCCMLDSEGEVTDFLRL-PHFL 514 Query: 363 QAAKA------------AMTVAALCEKHNVELVAI---GNGTAS--RETERFYLDVQKQF 405 + A ++ ++A+ G T S ++ + D++ + Sbjct: 515 RRRNAFYQRDRDLKQADVESLKNFISTQKPHVLALASEGKNTTSVLQDIKGCIEDLESEQ 574 Query: 406 PKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI----- 460 + ++ A+VY AS+L EF D LR AVSIARRLQDPL E ++ Sbjct: 575 QMAPIKVQLIDSNVAAVYQASKLVETEFRDYPPLLREAVSIARRLQDPLIEFSRLCNPDD 634 Query: 461 DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRM 515 D + + Q VSQ +L + VN VGVD+N A + ++ V GL Sbjct: 635 DILCLKLHPQQDAVSQEELKEAMFQEFIYRVNEVGVDINRAITHPHTASIVQFVCGLGPR 694 Query: 516 MAQNIVA-WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD----------NPLD 564 ++V + +N + NR QL+ +LGPK F CAGFL+I+ LD Sbjct: 695 KGNSLVRTLKQKNQRLDNRNQLVTHCQLGPKVFINCAGFLKIDTASAGDGADDTYIEVLD 754 Query: 565 ASTVHPEAYPVVERILAATQQAL------------KDLMGNSSELRNLKASDFTDE---- 608 ++ +HPE Y ++ + ++++ N +L++L F +E Sbjct: 755 STRIHPETYEWARKMAVDALEYDEAADDANPAEALEEILENPDKLKDLDLDAFAEELERQ 814 Query: 609 --KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGA 666 T+ DI EL +D R F + + P G + G Sbjct: 815 GYGNRSITLYDIRAELNSRYKDLRTPFHPFTPEEAFSILTKETPETFYRGKMVTCKVTGI 874 >UniRef50_C4QPS3 Suppressor of ty, putative n=1 Tax=Schistosoma mansoni RepID=C4QPS3_SCHMA Length = 1408 Score = 351 bits (901), Expect = 6e-95, Method: Composition-based stats. Identities = 134/802 (16%), Positives = 262/802 (32%), Gaps = 166/802 (20%) Query: 108 KPKRRT-RGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD----------------- 149 + R T ++A AGL L S E QY+ D Sbjct: 394 RQARATASYEVAKRAGLGDLVQRFGLSASQFAENVQDQYLRHDVDQCPMLPIDAAGDFLS 453 Query: 150 KGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKF 205 +++ AL ARY+L + + + +R A + +E F Sbjct: 454 PQFPNSELALSAARYMLAFEISREPLVRKMMRQMFNLQAVISMRPTERGAKHIDESHPLF 513 Query: 206 RDYFDHHEPLSTVPSHR-ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL 264 + + ++P++ + + L + + ++Q ++ + Q Sbjct: 514 QIKYLSNKPVTDLMGNVLFLHIHNAERDKLVQYEIHVPTEQIRGLSLVDELQRFFYQDEF 573 Query: 265 RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA 324 + R V+ + L EL + ++ + + A+ L + L P Sbjct: 574 SSLVQAWNEQRNLVLKQAAEEFIFPGLVRELRQKLLNESQQAVLRMCAKKLFNYLRIGPY 633 Query: 325 -----------------------GLRATMGL-----DPGLRTGVKVAVVDATGKLVATDT 356 + L D ++ V +D G++V Sbjct: 634 PPDGHHFHTSGDIDSRSSGAVWPKGARVLSLALKNEDDSRKSMVTAVQLDCNGEVVDFLH 693 Query: 357 IY--------PHTGQAAKAAM--TVAALCEKHNVELVAIGNGTASRET-------ERFYL 399 + P + K ++ KH ++ IG R+ + Sbjct: 694 FHGLLVSRRAPEDMKKLKEEDMQRLSTFMVKHKPQVCVIG--CDCRKALFLQEDIQNLVN 751 Query: 400 DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFP-DLDVSLRGAVSIARRLQDPLAELV 458 ++ + + ++ + V++ S A+ + P + LR A+S+ RRLQDPL E Sbjct: 752 ELANERRLLRIHVELMETELSIVFALSSRASFDLPISYPLLLRQAISLGRRLQDPLFEFA 811 Query: 459 KI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTR 508 ++ + I Q + + L R L+ + VN VGVD+N + ++ Sbjct: 812 QLVTIENEILGIRWHPLQDSLPRDMLLRALEIEFINRVNEVGVDVNRCLSHPHTAGVIQF 871 Query: 509 VAGLTRMMA-QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG-------- 559 ++GL + + + NR QL+ + GP+ CAGF++I+ Sbjct: 872 ISGLGPRKGLHMLKILKHKKTHLTNRMQLVTMIEFGPRVVINCAGFIKIDTSSVRDLDAD 931 Query: 560 -DNPLDASTVHPEAYPVVERIL-----------AATQQALKDLMGNSSELRNLKASDFTD 607 + LD++ VHPE+Y + +++ AL++++ + + LR L F + Sbjct: 932 DVDLLDSTRVHPESYDLAKKMAVDALEYDDTEECDPTVALEEIVHSPARLRELDLDAFAE 991 Query: 608 EKF------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEG 656 E T+ DI KEL RD R +++A ET L G ++E Sbjct: 992 ELKRQEHGDKHITLYDIRKELNNRYRDYREAYQSANPESIFSMVTHETPETLHVGRLVEC 1051 Query: 657 AVTNVT---------------------------------------------------NFG 665 V +V G Sbjct: 1052 RVLSVATRRPRPEQLDNANPTKNEINGLWMCPFCQQDNFQLLNHVWSHFDNNECPGQPVG 1111 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 V + DG + + + + + G +V+ +V ++D+ R + LT + E Sbjct: 1112 LRVQLDNGIDGFIPLKFM--DSPDKLFERTQPGSLVQCRVTKIDITRFNVELTCKSAELK 1169 Query: 726 GETNARRGGGNERPQNNRPAAK 747 E + R + + Sbjct: 1170 DERHIWRPRQDAFYDFEKEEKD 1191 >UniRef50_UPI00017F7950 YALI0B01224p n=1 Tax=Yarrowia lipolytica RepID=UPI00017F7950 Length = 1406 Score = 338 bits (868), Expect = 4e-91, Method: Composition-based stats. Identities = 141/904 (15%), Positives = 277/904 (30%), Gaps = 158/904 (17%) Query: 18 PEQVDAAVRLL-DEGNTVPFIARYRKEITGG----------------------------- 47 V + + E VPFI +R++ Sbjct: 326 ETAVSKVLEFIAKENLEVPFIWHHRRDFLTHVSKHEKFKAKVEDDEYEPTLEAPVASTTE 385 Query: 48 ------------LDDTQLRNLETRLSYLRELEERRQAILKSISEQGKL---TDDLAKAIN 92 L L + + E++Q + + ++ G Sbjct: 386 ETKEIEYTTVELLSLDDLWMIVQLDLDYHGIVEKQQQLERLRTQAGVSKTGNHSFINDFA 445 Query: 93 ATLSKTELEDL--YLPYK------------PKRRTRGQI------------AIEAGL--E 124 + S + +D Y+ ++ KR +R + G+ + Sbjct: 446 NSASLQDTQDAIEYVQFRFSGELGDLQSGSSKRHSRYARYDRIRASKLYGLVRQFGISSD 505 Query: 125 PLADLL--------WSDPSHTPEVAAAQYVYADKGV-ADTKAALDGARYILMERFAEDAA 175 A+ L D + P A Y+ V +D +AL+ A + A D Sbjct: 506 EFAENLETSTRINYTEDNARAPADLATDYLNDSSLVLSDAASALESATQMFAMELAFDPR 565 Query: 176 LLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHEPLSTVP--SHRALAMFRG 229 + VR + A + +E + + + + L M + Sbjct: 566 VRRYVRQQFAQLAKIDVYATEAGSSQIDEAHPAYEFKYSRNLSFEELRKSPKLYLQMLQA 625 Query: 230 RNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLM 289 +G++ + ++ F + ++ D + + ++ R+ VV + ++ Sbjct: 626 EAKGLVNVRVSYP-DFKTKFIDLLLSKLQSDGVSDIASQ--WNTQRRAVVRIAMKT-LVP 681 Query: 290 HLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR--------ATMGLDPG----LR 337 + + +R E + R L AP R + L G R Sbjct: 682 MVTRSIKEELRNDCERQLFFELRRMFGRKLNQAPFKPRNYEKGTVPRVLALSAGQADFRR 741 Query: 338 TGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE---- 393 V VD G++ + Q + ++ + ++ +L+A T Sbjct: 742 DAVVGVFVDEEGRVAERAKLG--APQTQEFTNALSEMVKRRTPDLIAFSGQTVQSHRLKS 799 Query: 394 -TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQD 452 E + + V + A ++ S A EF D R V++AR +Q Sbjct: 800 VIEEVVRTQGLEAEGEPLEVRWVQDEVACLFRNSAGALVEFADSPPLERYCVALARYVQS 859 Query: 453 PLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPL 505 PL E + + + K+I + +Q +S+ + +D+ D VN VGVD+N A + Sbjct: 860 PLLEYLSLGKEIKAIPMVDFQSLISEDRFYEAVDSTFVDYVNLVGVDINEAIRDAYVARM 919 Query: 506 LTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH------- 558 L +AGL A + G R L+ G F A FLR+ + Sbjct: 920 LPYIAGLGPRKASGLTHKIQSRGYLGTRLDLITEKLCGKNVFMNVASFLRLPYDKRSVRH 979 Query: 559 -GDNPLDASTVHPEAYPVVERILAAT---------------QQALKDLMGNSSELRNLKA 602 LDA+ +H E Y + +++ A + + + +L L Sbjct: 980 EETELLDATRIHIEDYELAKKMAADALELDEEDLLEFESEGGVIAQLMKEGAEKLNELIL 1039 Query: 603 SDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPG 651 + +E K T+ I +EL + R + ET L PG Sbjct: 1040 EGYAEELEQKLGKKKRYTLEMIRRELINHYEELREPLHVLTDLEVFTMLTGETEKSLHPG 1099 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 ++ + +++ V + G V ++++ P + ++ V+EV Sbjct: 1100 SVVAVQIRRISDRYLAVRLSCGIQGNVTQDRITDQRGVHPSALFHHQQTIRAVVMEVSYS 1159 Query: 712 RKRIALTMRLDEQPGETNARRGGGNER------PQNNRPAAKPRGREAQPAGNSAMMDAL 765 L+ + R R + +A+ RE + + L Sbjct: 1160 NFSAELSCLHRDISDAQKRARQVKRPRDQWDFEAEAADKSAQEVRREVEQRKTRVIKHPL 1219 Query: 766 AAAM 769 Sbjct: 1220 FKLF 1223 >UniRef50_Q5KLR1 Transcription elongation factor SPT6 n=2 Tax=Filobasidiella neoformans RepID=SPT6_CRYNE Length = 1506 Score = 335 bits (860), Expect = 3e-90, Method: Composition-based stats. Identities = 146/912 (16%), Positives = 304/912 (33%), Gaps = 181/912 (19%) Query: 18 PEQVDAAVRL-LDEGNTVPFIARYRKEITGGLDD-----------TQLRNLETRLSYLRE 65 + V A+ + + VP++ Y++++ L++ +L + R Sbjct: 342 EKAVSTALNMMFVQHLEVPYLWHYKRDVFSLLENQGQSSVLFLERDELWQVYVLGQRYRA 401 Query: 66 LEER--------------RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYK--- 108 + ER + I +G L +I A E L Y Sbjct: 402 IHERNEQTRQQWGKIKARKGDIEDEYFTKGLLGKACVASIEAAGEGD--EWLAYHYASDI 459 Query: 109 ----------------PKRRTRGQIAI--------EAGLEPLADLLWS------------ 132 P+R R I G++ A+ + S Sbjct: 460 KAIKEEEAFDEVSKKLPERAEREDIRRGRIMKLVEAFGID--ANKVASSFQDVHGQPAPV 517 Query: 133 -DPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLV 191 +P P A ++ A + + AL A ++L++ ++D A+ + RD++ + Sbjct: 518 MNPDKMPLELADEFTGA--AYSSPEQALSAASFVLVQELSKDPAIRQQARDFMDTCGLVT 575 Query: 192 STVVSGKEEEGAKFRDYFDH----HEPLSTVP-SHRALAMFRGRNEGVLQLSLNADPQFD 246 ++ Y++ ++P+ S + + M + EG++ ++ + Sbjct: 576 VNATDRGMSVIDQYHLYYNFKFLTNKPVLDFRDSPQFVHMLKAEEEGLINIAFDIREDML 635 Query: 247 EPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDE 306 ++ + G + + R V + + ++ + +R +AE+ Sbjct: 636 ASFTDALIRCCRSNDYGEIAS--AWNEVRMEVCNTLVKKHLMPMASKWIKEHLRTQAEEY 693 Query: 307 AINVFARNLHDLLMAAPA--------GLRATMGLDPGL---RTGVKVAVVDATGKLVATD 355 L + P + + + G R V ++D G + Sbjct: 694 IAERCREELELRVNVRPYASSGMEQGETPSVLAITNGKGDIRDAVMAVMLDDEGNVRTQT 753 Query: 356 TIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTAS--RETE-------RFYLDVQKQFP 406 + + L EK ++V IG +A R + + +++ Q P Sbjct: 754 KF--DNLRDEEDKTMFIELLEKRKPKVVVIGGFSAQTARLKDAALVAIRQHAIELLGQNP 811 Query: 407 KVT------------------------AQKVIVSEAGASVYSASELAAQEFPDLDVSLRG 442 V+ + V++A A +Y +SE A +E P+L ++ R Sbjct: 812 PVSDAYPDHEGFQYAMAEYDEKLKAHLIPLIFVNDATARLYMSSEEAEKEHPNLPLNGRY 871 Query: 443 AVSIARRLQDPLAELVKIDPKSIGVG---QYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 A+ +AR Q+PL K+ V +Q + Q +L L+ + + V +G+++N Sbjct: 872 ALGLARYAQNPLNAYCKLGKHIASVTFMEHHQKLIPQEKLLYHLERGLVNSVCFMGIEIN 931 Query: 500 TASV-----PLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFL 554 + +L +AGL A ++ ++G NR + GP FE AGFL Sbjct: 932 SCVADPYQRAMLPYIAGLGPRKADAVIYGIQKHGALINRMAFTDLGLFGPTIFENTAGFL 991 Query: 555 RI--------------NHGDNPLDASTVHPEAYPVVERILAATQQALKDLM--------- 591 I +PLD + +HPE Y +++ + + Sbjct: 992 TIESDLKDMMLEAENPQEQPDPLDMTRIHPENYEFAQKMCQDALDLDVEDVADRHKSEVV 1051 Query: 592 -------GNSSELRNLKASDFT------DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 +L L DF E T+ +I+ EL + D RP F Sbjct: 1052 QTLMLDDKRGKKLGELNLDDFAFNLQRQGEGNKRHTLGEIVSELIRYRSDRRPAFYVPTD 1111 Query: 639 ADGVETMNDLQP-----GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK---FVED 690 + V + G+ + V + F + D ++ ++++ V Sbjct: 1112 WEIVTMVTGETERTVGRGLKVTATVRKAISARVFCQLESGLDAVLERDYVADEDQAPVTS 1171 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE----RPQNNRPAA 746 V K +K V+ + R ++ ++ R + + + +E + + + A Sbjct: 1172 CDEVFKPRQAIKGVVIMPEPARFQVRISTRPSDLRQGVDFVQPFKDEEYNSKDRRDAAEA 1231 Query: 747 KPRGREAQPAGN 758 ++ + AG Sbjct: 1232 ATAAKKQRRAGK 1243 >UniRef50_A4S671 Predicted protein n=2 Tax=Ostreococcus RepID=A4S671_OSTLU Length = 1245 Score = 332 bits (852), Expect = 3e-89, Method: Composition-based stats. Identities = 142/922 (15%), Positives = 275/922 (29%), Gaps = 172/922 (18%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRK------------EITGGL 48 +M + R IA + D +P+I R+ E L Sbjct: 131 IMEEEITRCIALLLTLT----------FDHHLEIPYIVSQRRDDLLPLLRGRAEEARPAL 180 Query: 49 DDT------------QLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLS 96 + + + +LE R+ I ++ + + + A Sbjct: 181 TEDGDNYQRLLRRFDVIDAIMEWDERYVKLELRKARIASALEQAANEKGESEQGHVARQC 240 Query: 97 KTELEDLYL------------PY-----------KPKRRTRGQIAIEAGL-------EPL 126 + YL + +P R+T+ ++ G+ P Sbjct: 241 MELVRVAYLDKHVDDAEAKANLFFASLDANSKLRRPGRKTQYDAHVKRGIRDLVNMSGPT 300 Query: 127 ADLLWSDPSH----------TPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 A+ TPE A VY D+G A++ + + ++ + Sbjct: 301 AEAFGEAIKSGIPSELMANLTPEDVAK--VYFDQGYANSDEVMQAFVNVAATEIGAESEV 358 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRD----YFDHHEPLSTVPSHRALAMFRGRNE 232 RD +A + + + + P+ + + + G+ Sbjct: 359 RKWFRDEFLGHATITTQPTPEGTDIIDPWHPIAPVKRLLKMPVYILQGEQFAQILEGKRR 418 Query: 233 GVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLE 292 G+L++ + + E + + + + + + R+ V+ +L Sbjct: 419 GLLKVDIGFGDERLTSVIERMEKAYLSESMSDLAST--WNEVRRRVIRAALEEHLLPTFS 476 Query: 293 TELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLR-------TGVKVAVV 345 E + A D A + + AP T D +R + + Sbjct: 477 RETASQLALDARDALNRACADGAWNYICHAPWRPANTEDQDIEVRVVAAVSGSPATFVAL 536 Query: 346 DATGKLVATDTIYPHT----------------GQAAKAAMTVAALCEKHNVELVAIG--N 387 D+ G+LV I HT + +H + +G Sbjct: 537 DSAGELVDF--IQCHTLGRNIGGPGNVGGAQMMNQQDEIQALMDFIVQHRPHVCCVGASG 594 Query: 388 GTASRETERF---YLDVQKQFPK------VTAQKVIVSEAGASVYSASELAAQEFPDLDV 438 + R E + ++ P+ V ++ A + ++ E P+ Sbjct: 595 MDSKRVKESLNLVVGRIIEEQPRAIPEEVSEIAVHFVDDSVAKLCENAKETKAEMPEQQP 654 Query: 439 SLRGAVSIARRLQDPLAELVKI----DPKSIGVGQYQHD-VSQTQLARKLDAVVEDCVNA 493 S+ AV++ R L +P A + + + S+ + Q +S+ ++ + + VN Sbjct: 655 SVLRAVALGRGLLNPAAVVASLVSGGEVASLRMCPLQDSMLSKDDRVAIVERQLINLVNQ 714 Query: 494 VGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWRD--ENGQFQNRQQLLKVSRLGPKA 546 VGVD+N AS LL V GL A ++ E G +R+ L LG Sbjct: 715 VGVDVNMASAHPWCSVLLRYVGGLGPRKATLVINAVRTTEGGVVDSREDLKS--ALGEVV 772 Query: 547 FEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALK------------------ 588 F A FLRI + LD++ HPE Y I+ + Sbjct: 773 FRNAASFLRI-TEADMLDSTRCHPERYEQAMAIVVNALELEANLAAMDKYERERILQKVF 831 Query: 589 DLMGNSSELRNLKASDFTD------EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 D ++ L ++ + + + +I E P + RP + D Sbjct: 832 DPKTWEQKVAPLILEEYAEYLESEGAGKSLEALREIRIEFRHPFEELRPPWMPLTAEDEF 891 Query: 643 -----ETMNDLQPGMILEGAVTNVT------NFGAFVDIGVHQDGLVHISSLSNKF-VED 690 ETM+ L G +++ V + A + G V +S+ Sbjct: 892 ALLTGETMHTLSAGKLIQCTVKKIEGPRDGRGARAVCTLDSGLTGYVEKYDVSDDQSFSR 951 Query: 691 PHTVVKAGDIVKVKVL--EVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAK 747 V G ++ +V VD+ + L P ET + N + Sbjct: 952 IEEKVALGQVITARVKPDGVDVHNFSVQLACSSSALHPDETLQWEQHLHYTEANGYYSMV 1011 Query: 748 PRGREAQPAGNSAMMDALAAAM 769 + E + + D Sbjct: 1012 KQPGEVRLKKQKSKKDMQKRTF 1033 >UniRef50_P23615 Transcription elongation factor SPT6 n=13 Tax=Saccharomycetaceae RepID=SPT6_YEAST Length = 1451 Score = 331 bits (848), Expect = 7e-89, Method: Composition-based stats. Identities = 146/877 (16%), Positives = 291/877 (33%), Gaps = 148/877 (16%) Query: 18 PEQVDAAVRLL-DEGNTVPFIARYRKEITGG-------LDDTQLRNLETRLSYLRELEER 69 E + A++ + E VPFI YR+ L + L ++ + L + Sbjct: 371 KEAIGNAIKFITKENLEVPFIYAYRRNYISSREKDGFLLTEDDLWDIVSLDIEFHSLVNK 430 Query: 70 RQAILK----------------------SISEQGKLTD-----------DLAKAINATLS 96 + + + SI+E L D ++ + Sbjct: 431 KDYVQRFYAELHIDDPIVTEYFKNQNTASIAELNSLQDIYDYLEFKYANEINEMFINHTG 490 Query: 97 KTELEDL----YLPYKPKRRTRGQIAIEAGL--EPLADLLWSD---------PSHTPEVA 141 KT + L Y +K Q + G+ E + + + S PS P Sbjct: 491 KTGKKHLKNSSYEKFKASP--LYQAVSDIGISAEDVGENISSQHQIHPPVDHPSSKPVEV 548 Query: 142 AAQYVYADKG-----VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVS 196 + A+ G ++TK A+D + +++ + KVR K + + Sbjct: 549 IESILNANSGDLQVFTSNTKLAIDTVQKYYSLELSKNTKIREKVRSDFSKYYLADVVLTA 608 Query: 197 GKEEEGAKFRDYFDHHEPLSTVPSH------RALAMFRGRNEGVLQLSLNADPQFDEPPK 250 ++E K Y D ++ P H L M + +L + L+ Q Sbjct: 609 KGKKEIQKGSLYEDIKYAINRTPMHFRRDPDVFLKMVEAESLNLLSVKLHMSSQAQY--- 665 Query: 251 ESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINV 310 + QI ++ +++RK + K+ + E+ + + + Sbjct: 666 IEHLFQIALETTNTSDIAIEWNNFRKLAFNQAM-DKIFQDISQEVKDNLTKNCQKLVAKT 724 Query: 311 FARNLHDLLMAAPA-------GLRATMGLDPG----LRTGVKVAVVDATGKLVATDTIYP 359 L AP + + L G + V+ G + I Sbjct: 725 VRHKFMTKLDQAPFIPNVRDPKIPKILSLTCGQGRFGADAIIAVYVNRKGDFIRDYKIVD 784 Query: 360 HTGQA---AKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTA------ 410 + K T+ + + AIG + +T++FY +Q+ K Sbjct: 785 NPFDKTNPEKFEDTLDNIIQSCQPN--AIGINGPNPKTQKFYKRLQEVLHKKQIVDSRGH 842 Query: 411 --QKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI---DPKSI 465 + V + A Y SE AAQEFP+ ++ +++AR + PL E + + +S+ Sbjct: 843 TIPIIYVEDEVAIRYQNSERAAQEFPNKPPLVKYCIALARYMHSPLLEYANLTSEEVRSL 902 Query: 466 GVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMA-QN 519 + +Q+ +S QL+ L+ D VN V V++N A+ L ++G + A Sbjct: 903 SIHPHQNLLSSEQLSWALETAFVDIVNLVSVEVNKATDNNYYASALKYISGFGKRKAIDF 962 Query: 520 IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH----------GDNPLDASTVH 569 + + + N RQQL+ + L F AGFL I+ + LD++ +H Sbjct: 963 LQSLQRLNEPLLARQQLITHNILHKTIFMNSAGFLYISWNEKRQKYEDLEHDQLDSTRIH 1022 Query: 570 PEAYPVVERILAATQQALKDLMGNSS--------------------ELRNLKASDFTDE- 608 PE Y + ++ A + D + +L +L + +E Sbjct: 1023 PEDYHLATKVAADALEYDPDTIAEKEEQGTMSEFIELLREDPDRRAKLESLNLESYAEEL 1082 Query: 609 -----KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAV 658 + + I+ EL + R +F Q + E+ G I+ V Sbjct: 1083 EKNTGLRKLNNLNTIVLELLDGFEELRNDFHPLQGDEIFQSLTGESEKTFFKGSIIPVRV 1142 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP-HTVVKAGDIVKVKVLEVDLQRKRIAL 717 + + +V+ + + P + + + G KV+ +D + Sbjct: 1143 ERFWHNDIICTTNSEVECVVNAQRHAGAQLRRPANEIYEIGKTYPAKVIYIDYANITAEV 1202 Query: 718 TMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 ++ + + + + + + E + Sbjct: 1203 SLLDHDVKQQYVPISYSKDPSIWDLKQELEDAEEERK 1239 >UniRef50_Q6BVE1 Transcription elongation factor SPT6 n=7 Tax=Saccharomycetales RepID=SPT6_DEBHA Length = 1439 Score = 328 bits (840), Expect = 6e-88, Method: Composition-based stats. Identities = 149/921 (16%), Positives = 281/921 (30%), Gaps = 187/921 (20%) Query: 18 PEQVDAAVRLLDEG-NTVPFIARYRKE------------------ITGGLDDTQLRNLET 58 E V V + + VPFI +R++ + L + L + Sbjct: 326 KEAVSKVVEFISKDVYEVPFIWTHRRDFLLYSEEIKNEDGSVTNSVHKLLFEDDLWRIFQ 385 Query: 59 RLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPYK-------- 108 L E+R I K I L DDL K + + + ++DL Y+ + Sbjct: 386 LDIEYHSLYEKRVNIEKLIESLN-LDDDLVKDVKSLETMVAIQDLQDYINFTYSTEIRKL 444 Query: 109 -------------PKRRTRGQI-------------------AIEAG----------LE-P 125 K+ ++ I A E G E P Sbjct: 445 YDDKETEGIDANITKKHSKYAIFERIKSNVLYDAVNAFGISAKEFGENVQDQSSKKFEVP 504 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKG-VADTKAALDGARYILMERFAEDAALLAKVRDYL 184 D +PE + D+ D K AL+ R E + + +VR Sbjct: 505 YRIHATDDHIESPEDLIERLCEDDEVLFKDPKNALNAVRKTFAEEIFHNPKIRHEVRTTF 564 Query: 185 WKNAHLVSTVVSGKE--EEGAKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSL 239 A + V + + + + D + + + + L M G++ + + Sbjct: 565 KDFASIRVAVTEKGKAIDNHSPYADIKYAINRSPADLVRNPDVLLRMLEAEAAGLVVVKV 624 Query: 240 NADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTV 299 C + D + R+ V++ ++ + + + Sbjct: 625 ETKDYDSWFQCIFNC--LKSDGSSEIFEK--WNKEREFVLNMAFKR-LTSMVSMNTKEDL 679 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGL--------RATMGLDPG---LRTGVKVAVVDAT 348 R E + R + AP + L G + V A + + Sbjct: 680 RRECERLIASEVRRRFLARIDQAPFTPFGFDKGTKPNVLALSFGKGDFDSAVIGAFLRES 739 Query: 349 GKLVATDTIYPHTGQAAKAAMTVAALCEKH--------NVELVAIGNGTA---------- 390 GK+ + + ++ + ++ +++ + A Sbjct: 740 GKVDEFFKSEDNPIRDRESEDKFSGQLKEFFDKNLRNQKPDVIVVSGYNAISKKLFDSVK 799 Query: 391 -SRETERFYL---DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSI 446 ET ++ Q + A+++ SE A EF D + V + Sbjct: 800 SFVETNNVTANTEELTDVQNPPLIQVIWGQSETATLFQNSERARIEFSDKPTLAKYCVGL 859 Query: 447 ARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA--- 501 AR +Q PL E + + S+ ++Q +S + +++ D +N VGV++N A Sbjct: 860 ARYVQSPLLEYLSLGEGILSLTFFEHQKLISTDLVMEAIESAYVDIINMVGVEINEAIRD 919 Query: 502 --SVPLLTRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 LL VAGL A ++ + NR L++ F C+ FL I Sbjct: 920 PYIAQLLPYVAGLGPRKASGLLRNINSKLGSTLANRSDLIENELSTANIFINCSSFLNIP 979 Query: 558 HGD---------NPLDASTVHPEAYPVVERILAATQQALKDLMGNSS------------- 595 + + LDA+ +HPE Y + ++ A ++ M + Sbjct: 980 YDEGLSMRDSSVELLDATRIHPEDYDLARKMAADALDLDEEDMAHVEEQGGIIYQLMQDG 1039 Query: 596 --ELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV----- 642 ++ +L + + E K T+ I +EL + R F + + Sbjct: 1040 VNKVDDLNLTAYGKELESKFGKKKYATLQSIKEELVNNFEEIRRSFHILESHEVFHMLTG 1099 Query: 643 ETMNDLQPGMILEGAVTNV-TNFGAF---------VDIGVHQDGLVHISSLSNKFVEDPH 692 ET I+ V V NF F V G + +S+ Sbjct: 1100 ETTESFTRNTIVPVTVNKVGQNFRDFENSKIKFAKVTTSSFIQGNIEEASIPQGI----- 1154 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGRE 752 + G +V+ VL+ + ++ L+ + A + + E Sbjct: 1155 -DLAQGQVVQAVVLDAYYDSFTASFSL-LEADIQKGAAPKFHKDP---------LKWNFE 1203 Query: 753 AQPAGNSAMMDALAAAMGKKR 773 A+ A M A + K R Sbjct: 1204 AEQADKQKEMAKERAQLAKTR 1224 >UniRef50_C4R7H2 Transcription elongation factor n=1 Tax=Pichia pastoris GS115 RepID=C4R7H2_PICPG Length = 1500 Score = 325 bits (832), Expect = 5e-87, Method: Composition-based stats. Identities = 141/920 (15%), Positives = 295/920 (32%), Gaps = 183/920 (19%) Query: 18 PEQVDAAVRLLD-EGNTVPFIARYRKEITGG--------------LDDTQLRNLETRLSY 62 V V + E VPFI +R++ L++ L + Sbjct: 364 EASVKKIVDFIAIESFEVPFIWNHRRDYALHTYNDDSNNTIIVKLLNEDDLWRIVQLDLD 423 Query: 63 LRELEERRQAILKSISEQGKLT---DDLAKAINATLSKTELEDL--YLPY---------- 107 + +++ A L SI +Q L + + + +EL+D+ YL + Sbjct: 424 YHSIHDKKAA-LSSIYKQLDLDVVDPTYEEFFGSARTLSELQDIDDYLTFNYSSQVKNLT 482 Query: 108 ---------------------------KPKRRTR----GQIAIEAGLEPLADLL------ 130 K KR+ + + P+ + Sbjct: 483 AVAELSIEGNGSGEDEEQTTKSSFAEVKMKRKYSKYAIYDRIRQDAIYPVVQSIANISQM 542 Query: 131 ------------WSDPSHTPEVAAAQYVYADKG---VADTKAALDGARYILMERFAEDAA 175 DP +P A + +K ++ A + E+ + + Sbjct: 543 RENLAQSKRLHQVEDPIESPMDMIADIMSTEKDKTTFISSEKAYQAVKQFFSEQLSYEPF 602 Query: 176 LLAKVRDYLWKNAHLVSTVVSGKEE----EGAKFRDYFDHHEPLSTVP--SHRALAMFRG 229 + +R + + + E F + + P+S + L M + Sbjct: 603 IRKTIRTAFQSFGVINIELTERGKLQIEPESPYFDFKYAKNRPISALTATPDLYLRMIQA 662 Query: 230 RNEGVLQLSLNADP-QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVL 288 N+G++ + + + + + + N D+W++ + V Sbjct: 663 ENDGLVNIKVELPMLSTVVDHFYNILKSDGTSEISEKWNALRNDAWKQSL--DKLIPLVQ 720 Query: 289 MHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR------ATMGLDPGLR-TGVK 341 ++++ + + N F + + P + T+ G R V Sbjct: 721 LNVKESIRRDCERVLYFQVKNSFTKKIDQAPYQPPTYAKGTIPRVLTLSFGEGNRGDAVL 780 Query: 342 VAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDV 401 +D +G + + + Q+ + ++ + +N+ IG + T++ + V Sbjct: 781 GVFMDDSGDV-KSQIKFDEDFQSRDFSDSLTRYIKSNNINPDIIGISGFNIHTKKLFDKV 839 Query: 402 QKQFPKVT-----------------------AQKVIVSEAGASVYSASELAAQEFPDLDV 438 + + + + V++ A +Y S ++ E+P+ Sbjct: 840 NELVNEERLTIEYDNEYGYDREEDGRSDKHLIRVIYVNDETARLYQHSSKSSAEYPNRPQ 899 Query: 439 SLRGAVSIARRLQDPLAELVKIDPK--SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGV 496 + + +A+ +Q PL E + +D S+ + ++Q+ + + +L + + D VN VGV Sbjct: 900 LAKYCIGLAKYIQSPLLEYLALDESMYSLHIHKHQNLLPREKLIDAVQTSIVDIVNLVGV 959 Query: 497 DLNTASVPL-----LTRVAGLTRMMAQNIVAWRDENG-QFQNRQQLLKVSRLGPKAFEQC 550 D+N A L V GL A ++ G NR L+ F Sbjct: 960 DINEAVRAPYHALALPYVCGLGPRKAAGLIQSIQRIGSNLVNRAHLITEQLTSKTVFLNM 1019 Query: 551 AGFLRINHGDNP----------LDASTVHPEAYPVVERILAA------------------ 582 A F+ I + LD++ +HPE Y + ++ A Sbjct: 1020 ASFVYIVFDPDVERNPQGEMDLLDSTRIHPEDYSLARKMAADALDIEDIDDDDESAMRNA 1079 Query: 583 ------TQQALKDLMGNSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDPR 630 + KD + +L L D+ E T+ I +EL+ R+ R Sbjct: 1080 IYEMVFPRSPPKDEDDLTFKLDELILDDYATELERKHQLKKRSTLQIIKEELQSRYREIR 1139 Query: 631 PEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL-- 683 +F A+ ET++ + GM++ V V + V G + + Sbjct: 1140 RDFHILNEAEIFQLLTRETVDSFRKGMVIPVYVRKVESSYMSVSTQSLIAGNIQRQDILE 1199 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR----LDEQPGETNARRGGGNERP 739 N DP V G V+ +L+VD + L++ ++ G R + Sbjct: 1200 PNDR-RDPREVYSVGQTVRACILDVDYYNFKCQLSLLRQFTENQVAGLNVNRNPKFWDIE 1258 Query: 740 QNNRPAAKPRGREAQPAGNS 759 NR + ++ + + S Sbjct: 1259 SENRDRQEEIDKQREESRES 1278 >UniRef50_Q4PI89 Transcription elongation factor SPT6 n=1 Tax=Ustilago maydis RepID=SPT6_USTMA Length = 1723 Score = 317 bits (812), Expect = 1e-84, Method: Composition-based stats. Identities = 133/788 (16%), Positives = 260/788 (32%), Gaps = 146/788 (18%) Query: 108 KPKRRTRGQIAIEAGL--EPLADLLWS--------DPSHTPEVAAAQYVYADKGVADTKA 157 + K+ ++A + G+ + LA + S DP +P A Q+ + G + Sbjct: 569 RNKKTVLAELAKKFGITSDELASNVTSHTRQYSPRDPEESPFKFAEQFTGSAWGAHSPEI 628 Query: 158 ALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGK----EEEGAKFRDYFDHHE 213 AL A+ +L + +D L ++R A + +++ F ++ Sbjct: 629 ALAKAKMMLSQEIGKDPILKREMRQLFKDAAEINIEPTERGMTVIDDQHPYANFKFIANK 688 Query: 214 PLSTVP--SHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPA 271 P VP + L M + +E +++L ++ + + +G N Sbjct: 689 PARLVPQNPSQYLQMLQAEDELLIKLDIDLKDVVLTRFEARLYNNYASEGVGELSN--AW 746 Query: 272 DSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATM- 330 + R+ V+ + ++ + L +RE + + + + + P ++ M Sbjct: 747 NEQRRDVIREALKTHLVPNGRIWLKEFLREESRETLLRHVDVLMTKRVQEGPFMSKSMMA 806 Query: 331 ----------------------GLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAA 368 G DP + V+ +D G+ T +A+ Sbjct: 807 RNRDPKIEEEDRIPRVLAVSHGGGDP-RKDVVQAVYLDERGRFREHATFDDLRPLSARQM 865 Query: 369 MT--------------------VAALCEKHNVELVAIGNG----------------TASR 392 L ++ ++V + TA + Sbjct: 866 QERELELERTRGKAEFVDHRADFVKLLKQRRPDIVVVSGWSVRTAELKRHVQELADTAHQ 925 Query: 393 E---TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARR 449 E +R + D+++ + V + A +Y S AA+EFP+L R +++AR Sbjct: 926 EICDADRLHSDLERDQAVIDV--VTCHDDVARIYQHSSRAAEEFPELSELGRYCLALARY 983 Query: 450 LQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS----- 502 Q P+ E + D ++ + Q + Q +L + + VN GV++N A Sbjct: 984 AQSPVNEFAALGSDLTAVILDPNQRLLPQDRLRLHFERCIGAVVNENGVEINQAMTSTYL 1043 Query: 503 VPLLTRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 +L VAGL A +V G NR L+ + L + F+ CA FLRI Sbjct: 1044 QTMLPFVAGLGPRKAHALVNAISTKLEGTLINRTLLISRNILTFQVFQNCASFLRIEQDM 1103 Query: 561 ----------NPLDASTVHPEAYPVVERILAATQQALKDLM----------------GNS 594 + LD++ +HPE Y ++ A ++ + + Sbjct: 1104 LLEADEDDVPDVLDSTRIHPEDYDFPRKMAADALNKHEEDLEGEHPSLPCKELMEDADPA 1163 Query: 595 SELRNLKASDFTDEKF------GVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----E 643 +L L ++ F T+ EL KP D R + + + E Sbjct: 1164 DKLNTLDLDNYATMLFERKGERKRATLHSCRTELIKPYDDLREKQSEPSLEEMLTMFTGE 1223 Query: 644 TMNDLQPGMILEGAVTNV------TNFGAFVDIGVHQDGLVHISSLSNKFVE---DPHTV 694 T L G ++ VT V + +G + + + Sbjct: 1224 TSKTLAEGFVVSVEVTRVQEGNRMQEGHIKCRLDSGIEGTIEAEHAVEHYTPGSVRLRDL 1283 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQN----NRPAAKPRG 750 V+ + V ++D + + L++ P E R + P + +R A Sbjct: 1284 VRPQQTLDALVRKIDYKMCTVQLSI----SPWELQHRATHQGKTPIDIKFYDRRKADQWN 1339 Query: 751 REAQPAGN 758 A Sbjct: 1340 EHAAAKAK 1347 >UniRef50_Q3MNT0 Transcription elongation factor SPT6 n=2 Tax=Candida albicans RepID=SPT6_CANAL Length = 1401 Score = 308 bits (790), Expect = 4e-82, Method: Composition-based stats. Identities = 133/803 (16%), Positives = 253/803 (31%), Gaps = 151/803 (18%) Query: 21 VDAAVRLL-DEGNTVPFIARYRKEITGGLD---------------DTQLRNLETRLSYLR 64 V V+ + E VPFI +R++ +D + + + Sbjct: 329 VGQVVQFVSKENLEVPFIWNHRRDYLEYVDPDAPIPGSVRELMISEDDVWRIVKLDIEYH 388 Query: 65 ELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPY--------------- 107 L E+R K I + D+L K I S ++D+ Y+ + Sbjct: 389 SLYEKRLNTEKIIDSLE-IDDELVKDIKTLDSMVAIQDMHDYIQFTYSKEIRQREETQNR 447 Query: 108 KPKRRTRGQIAIE--------------------------AGLE-PLADLLWSDPSHTPEV 140 K + + E G E P DP +P+ Sbjct: 448 KHSKFALYERIRENVLYDAVKAYGITAKEFGENVQDQSSKGFEVPYRIHATDDPWESPDD 507 Query: 141 AAAQYVYADKG-VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKE 199 + + D+ D K A D R + + + +VR A + V Sbjct: 508 MIERLIQDDEVIFRDEKTARDAVRRTFADEIFYNPKIRHEVRSTYKLYASISVAVTEKGR 567 Query: 200 ---EEGAKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESY 253 + + F D + + + + L M G++ + + + Sbjct: 568 ASIDAHSPFADIKYAINRSPADLIAKPDVLLRMLEAERLGLVVIKVETKDFANWFDCLFN 627 Query: 254 CEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFAR 313 C + G + + R+ V+ + + +R E + Sbjct: 628 C----LKSDGFSDISEKWNQERQAVLRTAISR-LCAVVALNTKEDLRRECERLIASKVRH 682 Query: 314 NLHDLLMAAPAGL--------RATMGLDPG---LRTGVKVAVVDATGKLVATDTIYPHTG 362 L + AP + L G + V + GK+ + Sbjct: 683 GLLAKIEQAPFTPYGFDIGSKANVLALTFGKGDYDSAVVGVYIKHDGKVSRFFKSTENPS 742 Query: 363 QAAKAAMTVAALCEKH-----NVELVAIGNGTASRE-----TERFYLD----VQKQFPKV 408 + + ++ ++V + A+ + F + V+ +F Sbjct: 743 RNRETEDAFKGQLKQFFDEDETPDVVVVSGYNANTKRLHDVVYNFVSEYGISVKSEFDDG 802 Query: 409 T---AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI--DPK 463 + + + + A +Y SE A +EFPD ++ A+S+ R LQDPL E + + D Sbjct: 803 SSQLVKVIWGQDETARLYQNSERAKKEFPDKPTLVKYAISLGRYLQDPLLEYITLGDDIL 862 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQ 518 S+ ++Q +S + +++ D VNAVGVD+N + L V GL A Sbjct: 863 SLTFHEHQKLISNDLVKEVVESAFVDLVNAVGVDINESVRDSRLAQTLKYVGGLGPRKAS 922 Query: 519 NIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRI---------NHGDNPLDAST 567 ++ + R QL++ F C+ L+I + LD + Sbjct: 923 GMLRNIAQKLGSVLTTRSQLIEYELTTRTIFINCSAALKISLNKSINVKDFEIEILDTTR 982 Query: 568 VHPEAYPVVERILAATQQALKDLMGN-------------SSELRNLKASDFTDE------ 608 +HPE Y + ++ A ++ + S+L L +DF ++ Sbjct: 983 IHPEDYQLAMKMAADALDMDEESELHEKGGVIKELLENDPSKLNLLNLNDFANQIYKLTH 1042 Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM----ILEGAVTNVTNF 664 K ++ I EL + + R F+ D + +P M ++ +T VT Sbjct: 1043 KLKFRSLQAIRLELIQGFAEIRSPFRILTNEDAFFILTGEKPQMLKNTVIPATITKVTKN 1102 Query: 665 ---------GAFVDIGVHQDGLV 678 G V G + Sbjct: 1103 HHDPYARIRGLKVVTPSLIQGTI 1125 >UniRef50_B9WJY9 Transcription elongation, nucleosome (Dis)assembly factor, putative n=1 Tax=Candida dubliniensis CD36 RepID=B9WJY9_CANDC Length = 1403 Score = 308 bits (789), Expect = 6e-82, Method: Composition-based stats. Identities = 140/806 (17%), Positives = 248/806 (30%), Gaps = 157/806 (19%) Query: 21 VDAAVRLL-DEGNTVPFIARYRKEITGG------------------LDDTQLRNLETRLS 61 V V+ + E VPFI +R++ L + L + T Sbjct: 319 VGQVVQFVSKENLEVPFIWNHRRDYLEYVEPVDPAVAVPGSVRELMLSEDDLWRIVTLDI 378 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDL--YLPY------------ 107 L E+R K + + DDL K I S ++D+ Y+ + Sbjct: 379 EYHSLYEKRLNTEKIVESLE-IDDDLVKDIKTLDSMVAVQDMHDYIQFTYSKEIRQRGNE 437 Query: 108 ---------KPKRRTRGQIAIE--------------------------AGLE-PLADLLW 131 K + + E G E P Sbjct: 438 QEDGQSSNRKHSKFALFERIRENVLYDAVKAYGISAKEFGENVQDQSSKGFEVPYRIHAT 497 Query: 132 SDPSHTPEVAAAQYVYADKG-VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHL 190 D +P+ + + D+ D K A D R + + + +VR A + Sbjct: 498 DDAWESPDDMIERLIQDDEVIFRDEKTARDAVRRTFADEIFHNPKIRHEVRSTYKSYASI 557 Query: 191 VSTVVSGKE---EEGAKFRD-YFDHHEPLSTV--PSHRALAMFRGRNEGVLQLSLNADPQ 244 V + + F D + + + L M G+ + + Sbjct: 558 SVAVTEKGRATIDTHSPFADIKYAINRSPGDLIAKPDVLLRMLEAERLGLAVIKVETKDF 617 Query: 245 FDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAE 304 C + D + + R+ V++ ++ + + +R E Sbjct: 618 SSWFQCIFNC--LKSDGFSE--ISEKWNKEREIVLNLAFKR-LCSMVALNTKEDLRRECE 672 Query: 305 DEAINVFARNLHDLLMAAPAGL--------RATMGLDPG---LRTGVKVAVVDATGKLVA 353 N R L + AP + L G + V + GK+ Sbjct: 673 RLIANKVRRGLLAKIEQAPYTPYGFDIGSKSNVLALTFGKGDYDSAVVGVYIKHDGKVSR 732 Query: 354 TDTIYPHTGQAAKAAMTVAALCEKH--------NVELVAIGNGTASRE---------TER 396 + + + ++ +++ + A+ + Sbjct: 733 FFKSDDNPSRNRETEDAFKGQLKQFFDEDLRDETPDVIVVSGYNANTKRLYDVVYSFVSE 792 Query: 397 FYLDVQKQFPKVT---AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 F + V+ F T + V + A +Y S+ A +EFPD ++ AVS+ R LQ+P Sbjct: 793 FGISVKSDFEDGTSQLIKVVWGQDETARLYQNSDRAKKEFPDKPTLVKYAVSLGRYLQNP 852 Query: 454 LAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPL-----L 506 L E + + D S+ ++Q +S + +++ D VNAVGVD+N A L L Sbjct: 853 LLEYIALGDDILSLTFHEHQKLISNDLVKEVVESAFVDIVNAVGVDINEAVRDLRLAQTL 912 Query: 507 TRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRLGPKAFEQCAGFLRIN------- 557 V GL A ++ N NR L++ F CA L + Sbjct: 913 QYVGGLGPRKASGLLRNIGSNLGSVLVNRSALVEEELTTANIFINCASALNVVVGKSVNS 972 Query: 558 --HGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN--------------SSELRNLK 601 LD++ +HPE Y + ++ A + ++ M + +L L Sbjct: 973 KDFEVEILDSTRIHPEDYELARKMAADALEVDEEDMEHLGRGGVINQLMKDDPRKLNALN 1032 Query: 602 ASDFTDE------KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM--- 652 F E K T+ I +EL + R F+ D + +P Sbjct: 1033 LLAFAKELEERIGKKKFRTLQAIKEELINNYEEVRAPFRILNNEDAFFILTGERPQQLKN 1092 Query: 653 -ILEGAVTNVTNFGAFVDIGVHQDGL 677 I+ +T V F D GL Sbjct: 1093 TIIPVTITKVNKN--FNDPYAKIRGL 1116 >UniRef50_A8PWC4 Putative uncharacterized protein n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PWC4_MALGO Length = 1544 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 151/886 (17%), Positives = 284/886 (32%), Gaps = 192/886 (21%) Query: 27 LLDEGNTVPFIARYRKEITGG-------------------LDDTQLRNLETRLSYLRELE 67 +L++ V F+ ++R + L +L L T + L Sbjct: 340 MLNDLLEVSFLTQHRLDELEYTPIEAGAPSAHKNAATTTLLVRQELLTLHTLGIKYKLLL 399 Query: 68 ERRQAILKSISEQGKL-TDD--------------LAKAINATLSKTELEDLYL------- 105 R+ ++ + SE TD + + + E+ D+ Sbjct: 400 SRKDSLRSTFSELEATFTDAPVDGSIDIHAVRSTVEDLLVQASTLEEVTDISEWLAMRFG 459 Query: 106 -------------------------PYKPKRRT-RGQIAIEAGLEP--LA--------DL 129 Y ++ T Q+A GL LA Sbjct: 460 ERFREATVLAKGHETQTLKRPTVVSEYDQRKHTPMAQLAARLGLTSTQLAANVAGGIKQF 519 Query: 130 LWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAH 189 + D P A +++ A G +AAL AR +L ++ AL +VR +A Sbjct: 520 VPDDDESAPLTVADEFIGAAPGATTAEAALALARTLLAHEIGKEPALRREVRTLFRTSAL 579 Query: 190 LVSTVVSGKEEEGAKFRDYFDHH----EPLSTV--PSHRALAMFRGRNEGVLQLSLNADP 243 L + Y++ +P+ + + + L + E ++ ++L Sbjct: 580 LDVEPTERGMTRIDEAHPYYNFKFLRAKPVHAILQNASQLLQIVHAEEERLVHVTLRLPT 639 Query: 244 QFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERA 303 ++ +Q + D + R + + R+ V+ +L + E Sbjct: 640 DTANKLEQRLQDQFVSDGVSAR--SQAWNDERRAVIEEVCASFLLPLGRAWTREWLLEEC 697 Query: 304 EDEAINVFARNLHDLLMAAPAGLRATMGL--DPGLRTGV-------------------KV 342 + + + L + P + DP V KV Sbjct: 698 REALLRQCEQKLTQRVEGGPVQSAGMLSRQGDPEWDEQVSHVPRVLAVSHGSGDPRTSKV 757 Query: 343 AVV--DATGKLVA---TDTIYPHTGQAAKA----------AMTVAALCEKHNVELVAIGN 387 + D G L+ DT+ P G A +A L + + +++ + Sbjct: 758 VAICLDEDGHLIERVTYDTLRPLRGAAVEAGDDSDVQEDPRAEFTKLVRRRHPDVIVVNG 817 Query: 388 GTASR-ETERFYLDVQKQFPKVTAQ---------------KVIVSEAGASVYSASELAAQ 431 +A E + D+ + + V V + A +Y S AA+ Sbjct: 818 FSAHAQELKAIVQDLVSSAYEERVREEGLEGIAAEHARMDVVSVYDDVARLYQHSARAAE 877 Query: 432 EFPDLDVSLRGAVSIARRLQDPLAELVKI--DPKSIGVGQYQHDVSQTQLARKLDAVVED 489 EFP+L V R V +AR Q P+ E + D ++ Q + +L L+ + Sbjct: 878 EFPELSVLARYCVGLARYAQSPVNEFAALGADLTAVQFDPAQRLLPTERLRVCLERAIVM 937 Query: 490 CVNAVGVDL-----NTASVPLLTRVAGLTRMMAQNIVAWRDEN--GQFQNRQQLLKVSRL 542 VN +G+DL NT +L +AGL AQ ++ G NR+ L++ L Sbjct: 938 LVNDIGLDLQIALTNTYVQHMLPFIAGLGPRKAQALLNAIRTRLDGIVVNREVLVRRGLL 997 Query: 543 GPKAFEQCAGFLRI-----------NHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 + FLRI + + LD + +HPE Y ++ ++ + Sbjct: 998 SFVVWNNAISFLRIDQDAAADALDDDAQPDVLDTTRIHPEDYDFPRQMARDALNKHEEDL 1057 Query: 592 G----------------NSSELRNLKASDFTDE------KFGVPTVTDIIKELEKPGRDP 629 S +L L ++ T+ +EL +P D Sbjct: 1058 EGEHPSLACAEIMEDARPSEKLAALDLDNYATMLWERRGLRKRLTLLTCKQELIRPYDDW 1117 Query: 630 RPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFG-----AFVDIGVHQDGLVH 679 RP + ET L G ++ VT + V + DG++ Sbjct: 1118 RPPQLLPTTEELFMMFTGETRRSLSEGYVVPVIVTRIEEGRDIEGVLRVRLEAGIDGVIT 1177 Query: 680 ISSLSNKFVE---DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 + + + ++G + ++++DLQR R L++R + Sbjct: 1178 GRDIMPGYNSRDVRLRRLFRSGQALNAVIVQLDLQRMRAELSLRAE 1223 >UniRef50_Q55A48 SH2 domain-containing protein n=1 Tax=Dictyostelium discoideum RepID=Q55A48_DICDI Length = 1754 Score = 305 bits (781), Expect = 4e-81, Method: Composition-based stats. Identities = 142/923 (15%), Positives = 283/923 (30%), Gaps = 191/923 (20%) Query: 20 QVDAAVRLLDEGN-TVPFIARYRKEITGGLDDTQ-LRNLETRLSYLRELEERRQAILKSI 77 + ++ + +PFI Y K+I Q L N+ ++ ++ L+ I Sbjct: 361 AIFKILQFIQRDLLEIPFIYTYEKDIYEPYFTLQELWNIFDLDEKWAHMKVNKRN-LEQI 419 Query: 78 SEQGKLTDDLAKAINATLSKTELEDLYLPY------------------------------ 107 + + + + S+ + DLY + Sbjct: 420 GSNNQQLEPYKSVLLESRSEESISDLYDLFQMINGIQKNTNLLNGSSSLGSGGDGYDDKE 479 Query: 108 ------------------KPKRRTRGQIAIEAGL---------------EPLADLLWSDP 134 K +R I +AGL + L D ++ Sbjct: 480 GGSSATQGNTVGGLSRQKKAIKRDLYTIYTKAGLSKFLPNFGMTAQEFGQNLMDNYTTNK 539 Query: 135 SHT--PEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVS 192 E + V+ + L RY++ + D + VR K AH+ + Sbjct: 540 PRDQMAEPSTMALVHICLEADNKDRVLQATRYMMAQEIGYDPHVRYSVRMIYRKYAHITT 599 Query: 193 TVVSGKEEEGAKFRDYF----DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 T +E F YF +P + L + + EG ++ ++ + Sbjct: 600 TPTLKGFKEIDVFHPYFTVKSIQEKPAHLFEDSQYLLILKAEKEGFIKSTMAITEKTHNS 659 Query: 249 PKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKV------------LMHLETELM 296 E + + G + RK ++ + L + Sbjct: 660 VIIPEMESLYLSD-GTSAITQQWNEQRKLIIREALNKFLYPVLEKELRNKLLTEASNRVA 718 Query: 297 GTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGL-------------------- 336 ++ ED+ R + + G Sbjct: 719 FECAKKLEDKIRVAPWRPVSSSSGIGHSNSSVLFGGSRANNGYSNDDDEDEDDDEEVDYD 778 Query: 337 ------------------RTGVKVAVVDATGKLVAT---DTIYPHTG-----QAAKAAMT 370 + AV+++ G++++ D I G + K Sbjct: 779 RDGNPIPFKILSLCWGSDKIPTMGAVLNSDGEVLSHIKLDFICDRLGESLKEKKEKDIKR 838 Query: 371 VAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKV-----------IVSEAG 419 + +C+++ LV + +++R Y +V+ + + + E G Sbjct: 839 LEEICQEYQPRLVLVSA--TEMDSKRLYEEVKDHLQRWSNGERRIIRKSVLLNYYSPEIG 896 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIGVGQYQHDV 474 S+ ++S L +EF + LR +++ R DP+ E + + + + Q + Sbjct: 897 LSLQTSSRL-QEEFKEYPPILRHTIAVGRCALDPITEYASLCNDHNEILFLKLHPLQDMI 955 Query: 475 SQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQNIVAWRDENGQ 529 + L + L + VNAVGVD+N + L V+GL AQ ++ G Sbjct: 956 GKDYLVKLLHRCFINVVNAVGVDINRMIQCRFTSATLQFVSGLGSRKAQMLLNSLFRRGG 1015 Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGD------NPLDASTVHPEAYPVVERIL--- 580 F +Q L+ + C GF++I + LD + +HP +YP+ RI Sbjct: 1016 FVTSRQSLEKVLSQDVIYRNCIGFIQIRERHAADYKADLLDDTRIHPTSYPITYRIAAEA 1075 Query: 581 -------AATQQALKDLMGNSSELRNLKASDFTD------EKFGVPTVTDIIKELEKPGR 627 ++D++ +L L F D ++ + I KEL P Sbjct: 1076 LDKNLDERNFHSYIEDIIKRPKKLDRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFA 1135 Query: 628 DPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 D R ++ ET L+ G ++ + + +G + Sbjct: 1136 DIRHPYEEPSADTIFEWLTGETNQSLRRGTLVTVTTIRTFDNSVKCRLDNGLEGSIPTDC 1195 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPG----ETNARRGGGNER 738 +S+ + G + +V+ VD + ++L+ + + ET R N Sbjct: 1196 ISD---NGETKSLGRGVTINCRVMGVDKYQFTVSLSCKPSDLNPSFWEETIFRELKENGA 1252 Query: 739 PQNNR--PAAKPRGREAQPAGNS 759 Q R A P + + Sbjct: 1253 NQYLRLEEVAPPVEQTKRKPKRE 1275 >UniRef50_B8C8T3 SUPT6H,-like protein to suppressor of ty 6 n=1 Tax=Thalassiosira pseudonana RepID=B8C8T3_THAPS Length = 1304 Score = 302 bits (773), Expect = 4e-80, Method: Composition-based stats. Identities = 130/685 (18%), Positives = 230/685 (33%), Gaps = 104/685 (15%) Query: 157 AALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHE-PL 215 L G RY+ A + + +RD A + + + + F +Y+ H Sbjct: 349 DPLRGCRYVAAMELAHEPRIRRHLRDIYRAEACITTRPTAKGLQNIDAFHEYYGLHLLRN 408 Query: 216 STVPSH------RALAMFRGRNEGVLQLSLNADPQFDEPPKES--YCEQIIMDHLGLRLN 267 V H + L + + G + + ++ DE + E + ++ + Sbjct: 409 KHVKDHFPTACIQYLNLLKAERSGDITVQVHLPFVNDEMDTGTPWLMEALERVYMPANGD 468 Query: 268 NAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR 327 + R+ ++ +L H E E +R+ + + A+NL L M P Sbjct: 469 TEEWNDERRKILKMALVNYLLPHFEAETRRDLRDASTRIGVEAAAQNLQALAMEGPYRPS 528 Query: 328 ATMG-------------------LDPGLRTGVKVAVVDATGKLVATDTIY-PHTGQAAKA 367 +G DP + G +A +D G+ I + + A Sbjct: 529 YMLGENRFIVPTDDFPIVGVCSATDP--KDGTFLAAIDENGESQDHLAIPGGTSITSDNA 586 Query: 368 AMTVAALCEKHNVELVAIGNGTASRETERFYLD----VQKQFPKVTAQKVIVSEAGASVY 423 V + LV + + + F + IV + A ++ Sbjct: 587 REKVITFLMQTRPSLVVVDDEDFEARMDSFRMMHPNVDDDDDVVWKCNVDIVDDNVAQLF 646 Query: 424 SASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDV--------- 474 S +EFPD V+L+ A++ AR ++PL EL + G + ++ Sbjct: 647 GRSVRGKKEFPDQPVNLKVAIATARWAKNPLCELAYTWSTASDAGVFGTEMLFMNIHPLQ 706 Query: 475 ---SQTQLARKLDAVVEDCVNAVGVDLNTASVP-----LLTRVAGLTRMMAQNIVAWRDE 526 + L R+ + V+ + VGVD+N A +L+ V GL A N+ Sbjct: 707 RLLPKPLLLRQYERVLCNVTAEVGVDINGACTYDHMHGMLSFVPGLGPRKANNLKQSVAR 766 Query: 527 -NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN-------PLDASTVHPEAY---PV 575 G +R+ LL LGP + FLR+ D PLD + HP+ Y Sbjct: 767 IGGVVSSRKSLLAKRLLGPIIYNNAIAFLRVRSTDQLQDQMLHPLDDTRCHPDVYLRQKW 826 Query: 576 VERILAA----------------TQQALKDLMGNSSELRNLKASDFTDE------KFGVP 613 +I + + E+ L F + + Sbjct: 827 AVKIAVDALELGDSASNDTDDYAISALRDVMQNSREEVEELDLDTFAEMIEQNGNGKWLS 886 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFV 668 +T + E P DPR + ET L PG + G V +FG+ V Sbjct: 887 HLTMVKWEFRLPFEDPRKPMEPPTHEKLFKLLTGETDATLCPGKEVTGKVVKNGDFGSQV 946 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 + G + + +L++ V G IV + EV + LT++L++ Sbjct: 947 KLEGDVPGFIPLRNLADDHV---------GQIVNAIITEVKMDHMCCDLTLKLED----- 992 Query: 729 NARRGGGNERPQNNRPAAKPRGREA 753 ++ RP + P REA Sbjct: 993 FKKKSSEWGRPASLPPLDNSFDREA 1017 >UniRef50_A7S4Y8 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S4Y8_NEMVE Length = 717 Score = 288 bits (736), Expect = 8e-76, Method: Composition-based stats. Identities = 155/453 (34%), Positives = 216/453 (47%), Gaps = 83/453 (18%) Query: 344 VVDATGKLVATDTIYP--HTGQAAKAAMTVAAL-------------CEKHN--------- 379 V GK++ IYP + +A V + ++ Sbjct: 250 FVGGPGKVLEVGVIYPIGRKTKRQEAEDRVKEMERFWRWESYILLAVKQRGRRLRTESRR 309 Query: 380 -VELVAIGNGTASRETERFYLDVQK--QFPKVTAQKVIVSEAGASVYSASELAAQEFPDL 436 E +AIGNG RE E F D+ K F + + IVSE GASVYSAS A E P+L Sbjct: 310 WCETIAIGNGVGCREAETFISDLIKSKAFHPLDPRYCIVSEDGASVYSASNEAMLELPNL 369 Query: 437 DVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGV 496 ++S+RGAVS+ RRLQDPL ELVKI+PK +G+G YQHD+ + L L V+ DCV+ VG Sbjct: 370 EISMRGAVSLGRRLQDPLLELVKIEPKHLGIGMYQHDIPEVLLRAALQGVLTDCVSFVGA 429 Query: 497 DLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 DLN A V LL ++GL AQ IV +R++N F NR QLL+V +G K +EQC GF+R+ Sbjct: 430 DLNAAGVSLLKCLSGLNEKRAQAIVEYREKNNGFVNRAQLLEVKGIGEKTYEQCVGFVRV 489 Query: 557 NH------------------------------------------GDNPLDASTVHPEAYP 574 NPLD + +HPEAY Sbjct: 490 RAAAAQTPAGDVICLDSDDEEEEAIGRKRKKRGENTSKKKARALKPNPLDMTPIHPEAYG 549 Query: 575 VVERILAATQQALKDLMGN------SSELRNLKASDFTDEKFGVPT-VTDIIKELEKP-G 626 ER + +D+ SS+L+ + + P + II L + Sbjct: 550 AAERFMELVGVRPRDIGKPNIRTAISSKLQAQSLEKISGQLKVTPEALQLIIDGLGQAVD 609 Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 D R F+ F G+ D++PG L G V+NVT FGAFVD G+ +DGL+H S ++ Sbjct: 610 FDIRDGFERPLFKKGLTKFEDVRPGHELTGRVSNVTTFGAFVDCGIGRDGLIHTSRMAG- 668 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + AGD+V+VKV+ D + + L + Sbjct: 669 -----RDDLGAGDVVEVKVISKDETKGHVNLQL 696 >UniRef50_B7G582 Predicted protein n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G582_PHATR Length = 1958 Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats. Identities = 139/833 (16%), Positives = 256/833 (30%), Gaps = 218/833 (26%) Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFD-- 210 A+ K L G RY+ A + + +R+ +A + + +E F D+F Sbjct: 793 AEAKDPLRGCRYVAAMELAYEPRIRMVLRNLFRMHAVITTKPTKKGIDEIDSFHDFFGLH 852 Query: 211 --HHEPLSTVPSH---------------------------------RALAMFRGRNEGVL 235 ++P+ + L + + G + Sbjct: 853 LIRNKPVKDHFPLDKVESSIRKADLGEEERRELDLEMQKREYDSCLQYLNILKAEESGDI 912 Query: 236 QLSLNAD--PQFDEPPKES--------------YCEQIIMDHLGLRLNNAPADSWRKGVV 279 ++ D+ K ++ +L ++ + R V+ Sbjct: 913 TSHVHLPLLEHLDDWYKIDTDQLLGRDNQDDSPLYNELEKVYLPPDVDTDQWNGERCKVL 972 Query: 280 SWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLD------ 333 + +L E EL +R+ A + + A NL L M P + + + Sbjct: 973 RFALNTFLLPQFEAELRRDLRDAATRIGVKMAAENLRKLAMEGPYRPASILHTENRFLYP 1032 Query: 334 ------------PGLRTGVKVAVVDATGKLVATDTIY-PHTGQAAKAAMTVAALCEKHNV 380 + +A V G+ + K V + Sbjct: 1033 TEDMAIVGICCTADGKDATYLASVTERGESNDFLAVPSGTKVDQGKMREKVVTFLMQCRP 1092 Query: 381 ELVAIG--NGTASRETERFYLDVQKQFP-------------------------------- 406 + +G G SR R D+ K+ Sbjct: 1093 AAIVVGTSGGFESRLLTRKMGDLLKEAEQRWTNRYIQGEDEDDEAFEIRQAAFRQLQPSA 1152 Query: 407 --------KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 ++ ++ A ++ S +EFPD V+L+ A+++AR QDPL EL Sbjct: 1153 HFDDQDEGDWKCNVDLIDDSVAQLFGRSVRGRKEFPDFAVNLKCAIAVARYAQDPLGELT 1212 Query: 459 ------------KIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASV--- 503 + + + Q + +T+L R+ + ++ D VG D+N+A Sbjct: 1213 YAWSVASDAGAFGTEMLYLNIHPMQQLLPRTRLLREYERILCDVTAEVGTDINSACTFDH 1272 Query: 504 --PLLTRVAGLTRMMAQNIVAWRDENG-QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 LL VAG+ A N+ + G R+ LL+ +GP + FLRI D Sbjct: 1273 LRGLLVFVAGMGPRKAANLKQTLSQLGSALSRRRDLLENRMIGPVVYNNLVAFLRIRRVD 1332 Query: 561 N-------PLDASTVHPEAY--------------------------------------PV 575 PLD + +HP+ Y Sbjct: 1333 QLVEQFLHPLDDTRLHPDVYLRHNWAIKIAFDALEREDSKTKDAASIKALRDVMENSHHE 1392 Query: 576 VERILAATQQALK------------------DLMGNSSELRNLKASDFTD------EKFG 611 VER+ AT+ + ++ L F + Sbjct: 1393 VERLFMATKSEWEMNYGLTFNIKDWDPRVNVPKDMWRDKVEELDLEAFANMIEDTKLGRW 1452 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGA 666 + I E P DPR + E+ L+PG + G V +FG+ Sbjct: 1453 HSHLEMIKWEFRLPYVDPRKPMEPVSSDRLFSLITGESDQSLRPGKEVTGKVVRNGDFGS 1512 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPG 726 V + + + +LS++ VE +V AG IV + V + + +++++++ Sbjct: 1513 RVKLEGEIPAFIPLRNLSDEHVETAEDIVAAGQIVTAVITMVKKEHMTVDMSLKMED--- 1569 Query: 727 ETNARRGGGNERPQNNRP-------AAKPRGREAQPAGNSAMMDALAAAMGKK 772 + ERP + P A + E A ++AL ++G K Sbjct: 1570 --FRKNPSSWERPLSLPPIDVHFDLVAAAKIEEDNNKRREAHLEALQLSLGTK 1620 >UniRef50_C1E5G2 Transcription elongation-nucleosome displacement protein n=2 Tax=Micromonas RepID=C1E5G2_9CHLO Length = 1566 Score = 282 bits (722), Expect = 3e-74, Method: Composition-based stats. Identities = 145/934 (15%), Positives = 300/934 (32%), Gaps = 184/934 (19%) Query: 13 EIQARPEQVDAAVR-LLDEGNTVPFIARYRKEITGGL-----DD---------------- 50 E++A + A ++ + ++G V ++A+ +++ L DD Sbjct: 351 EVEAVTAAIAALLKAVHEDGLEVAYVAQNMRDVVEPLMRGRRDDSRPPPRDANGAVLERR 410 Query: 51 ----TQLRNLETRLSYLRELEERRQAILKSISEQGKL----------------------- 83 + + L +RR+ ++K I ++ Sbjct: 411 VHRRDVIHEIMEWDRRFSRLAQRRKEMMKKIDAAAEILERDAAPEQDLSLLSSLANECED 470 Query: 84 --TDDLAKAINATLSK------TELED---------LYLPYKPKRRTRGQIAIEAGLEPL 126 T+++ + A L+ TE+E L +P R++ + G+ L Sbjct: 471 APTEEVLSDVEACLTLRFHEQLTEVEQSGKADGSLGLTRQLRPLNRSQYAHHCKKGIRDL 530 Query: 127 ADLLWSDP--------------------SHTPEVAAAQYVYADKGVADTKAALDGARYIL 166 +DP +PE A YV + G AD + + ++ Sbjct: 531 LPTYGADPRDLGASLGSYRRTKVSQAVPDMSPEAVAEVYVGDETGYADVSSVIRSLVHVA 590 Query: 167 MERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFR----DYFDHHEPLSTVPSHR 222 A + A+ A +R + + A + + E F +P Sbjct: 591 AAEIAAEPAVRAWLRRAIRRKACVWTQPTPAGTEAMDPFHPLAEIKRLQGKPACEFGGAE 650 Query: 223 ALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWT 282 A+ + +G+++L + + +++ + + + R+ ++ Sbjct: 651 FGAVLKAHRDGLIKLRIALPDVVIQELTNEMESAYVIEEVSEMAD--AWNKLRRDALAGA 708 Query: 283 WRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLR--------------- 327 + +L L E + A E + +L + AP Sbjct: 709 -KAALLPALTREAAVALERDAASEIRRLCGESLWRRVALAPWKPDVRDHDQFGADDEVEV 767 Query: 328 ATMG--LDPGLRTGVKVAVVDATGKLVAT---------DTIYPHTGQAAKAAMTVAALCE 376 + PG A++DA G+LV T + + Sbjct: 768 RVLAAVWGPG-DPPTTFAMLDADGELVDFLQCPNIAVGGKFGAATARRQADMDRLIQFMI 826 Query: 377 KHNVELVAI----GNGTASRETERFYLDVQKQFPKVT----------AQKVIVSEAGASV 422 +H + + G A R + V + + Q + + ++ Sbjct: 827 EHRPHVCVVATAPGQLHACRNLKENIALVIGKILEDHARAIPEEVNTIQLHFIDDTVPAL 886 Query: 423 YSASELAAQEFPDLDVSLRGAVSIARRLQDP----LAELVKIDPKSIGVGQYQHDVSQTQ 478 ++ EF + +R AV++ R +++ A + +++ +G Q ++ + Sbjct: 887 AASCAAMRTEFIEHSTEIRHAVALGRYIRNSAAVVAALAAGGEARALNLGPLQDALTPEE 946 Query: 479 LARKLDAVVEDCVNAVGVDLNTASVPL-----LTRVAGLTRMMAQNIVAWRD--ENGQFQ 531 + + D +N GVD+N A L VAGL A ++VA G + Sbjct: 947 KMGIFERGLIDVINQCGVDVNAAVAHPWQQYQLHYVAGLGPRKAGSLVAAVRGSSGGALE 1006 Query: 532 NRQQLL-KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +R QL+ ++ LGP ++ A LR+ D+ LD + +HPE Y I+A + Sbjct: 1007 SRDQLVSELGALGPCVYKNAATTLRVI-DDDVLDRTRIHPERYDHTLEIIANAFDYDFEN 1065 Query: 591 MG------------------NSSELRNLKASDFTDEKFGVPT------VTDIIKELEKPG 626 + N +L L + + G + + ++ EL P Sbjct: 1066 LKSASASVKRKTLERAMDPDNWDKLAVLDLRAYAEYLNGQGSGWLLSALRELRMELRDPF 1125 Query: 627 RDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNV--------TNFGAFVDIGVH 673 + R ++ + ET L PG I+ V + T V + Sbjct: 1126 GEIRMSWQPLSTWEEFSLLTGETRESLSPGKIVHCTVKRLVPPRREEGTEGHVVVQLESG 1185 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 G + S LS++ V+ V G ++ +++ + + + L + E + R Sbjct: 1186 VMGHIAKSDLSDRPVDRLEHKVAVGQVIAARIINANYEENTVYLKCKGSALSAEESKRIE 1245 Query: 734 GGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 + G A+P DA + Sbjct: 1246 FQTWGNKLYYSCEPLDGEVAKPTKPKKRKDAASR 1279 >UniRef50_UPI00019240C9 PREDICTED: similar to Suppressor of Ty 6 homolog (S. cerevisiae), partial n=1 Tax=Hydra magnipapillata RepID=UPI00019240C9 Length = 1005 Score = 278 bits (710), Expect = 7e-73, Method: Composition-based stats. Identities = 87/484 (17%), Positives = 163/484 (33%), Gaps = 73/484 (15%) Query: 109 PKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADK-----------------G 151 P++RT I + GL +A + E Y + Sbjct: 525 PRKRTLYTICKDNGLLKMASNFGLTAAQFGENLRDNYQRHEPIQFSQTPLEAAESLICNT 584 Query: 152 VADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFR----D 207 +A L GAR+++ + + D + VR +NA + T ++E Sbjct: 585 FPSAEAVLTGARHMVAMQISRDTLVKQNVRQMFIENAKIYITPTKKGKKEIDNNHPNAPF 644 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 + +PL + + L M+ E ++++ + + SY ++I + + Sbjct: 645 KYLKSKPLRDLHGEQFLKMWHAEQENLVKMRIMIGQE-QHNQGFSYLDEIKQLYHRDEFS 703 Query: 268 --NAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 + R +S + LE EL + + D AI R LH+ + AP Sbjct: 704 LLVQEWNKQRSEALSLALSKMLYPMLEKELKAKLLRESIDFAIQACTRKLHNWISVAPYQ 763 Query: 326 -----------------LRATMGLD--PGLRTGVKVAVVDATGKLVATDTI---YPHTGQ 363 + P A++DA G++V + Sbjct: 764 PDSNQEGEYSTDNESSYGSRVLSCSFLPDRNAVSFFAMLDADGQVVDFLRLKYLLCRKNS 823 Query: 364 AAKAA--------MTVAALCEKHNVELVAIGNGTASRETERF-------YLDVQKQFPKV 408 K+ + K++ +VA+ E +R ++++ Sbjct: 824 VKKSEQDAKISDMNKLKDFIRKYSPRVVAV--AAECCEAQRVLDDITEAVQELEQDHQMP 881 Query: 409 TAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPK 463 +V A +Y S EFP+ LR A+S+ RR+Q+PL E + + Sbjct: 882 HIYVELVPGEVARIYQNSPRGLMEFPEYPELLRHAISLGRRIQNPLVEFAGLCNFEEELT 941 Query: 464 SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTRMMAQ 518 + + Q + L R+L+ + VN GVD+N A L + GL A Sbjct: 942 CLRLHPMQDVLPTDLLQRRLEIEFINEVNLTGVDINRALDFPHMAVLTQFLCGLGPRKAG 1001 Query: 519 NIVA 522 +++ Sbjct: 1002 HLLK 1005 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 22/110 (20%) Query: 20 QVDAAVRLLDEG-NTVPFIARYRKEITGG-LDDTQLRNLETRLSYLRELEERRQAILKSI 77 ++ AA+ + + VPFIA YRKE L L + + R+ + + Sbjct: 305 RIRAALGFMKKDLFEVPFIAMYRKEYVEPELKKEDLWKVYEWDEKYTQFSLRKNNLKRLF 364 Query: 78 SEQG--------KLTDD--------LAK----AINATLSKTELEDLYLPY 107 + K +D+ L + + S EL D+YL + Sbjct: 365 KDMQAYQFDISKKNSDEPLKDDFRLLEQEDIDRLENAQSLEELMDIYLHF 414 >UniRef50_UPI0001698B1A hypothetical protein Epers_31311 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001698B1A Length = 349 Score = 269 bits (688), Expect = 3e-70, Method: Composition-based stats. Identities = 167/278 (60%), Positives = 209/278 (75%), Gaps = 5/278 (1%) Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 + + N L S VVSGK++EG KF DYFD+ E + +PSHRALA+FRGRNEGVL L L + Sbjct: 2 NQMQNNGILSSQVVSGKQQEGKKFSDYFDYAEAIGKIPSHRALALFRGRNEGVLNLHLGS 61 Query: 242 DPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRE 301 EP S CE II G+ AD+W V W WRIK+ + LE EL+ +RE Sbjct: 62 GEAEGEP---SICESIIAASQGIAQQGRAADAWLTETVRWAWRIKLSLKLELELLAQLRE 118 Query: 302 RAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHT 361 RAE+EAI VFA NLHDLL+AAPAG +AT+GLDPGLRTGVKVA++D TGK+VATDTIYPH Sbjct: 119 RAEEEAIRVFASNLHDLLLAAPAGPKATIGLDPGLRTGVKVAMIDTTGKVVATDTIYPHA 178 Query: 362 G--QAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q ++ T+AA+ ++++ ELVAIGNGTASRET++ ++ K+ P++ QK++VSEAG Sbjct: 179 PKKQWDRSIATLAAMAKQYSAELVAIGNGTASRETDKLTAELIKKHPELKLQKLMVSEAG 238 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAEL 457 ASVYSASELA++E P+LDVSLRGAVSIARRLQDPLAEL Sbjct: 239 ASVYSASELASKEMPELDVSLRGAVSIARRLQDPLAEL 276 >UniRef50_UPI00019085B8 probable transcriptional accessory protein (RNA binding S1 domain) n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019085B8 Length = 274 Score = 266 bits (681), Expect = 2e-69, Method: Composition-based stats. Identities = 134/245 (54%), Positives = 168/245 (68%), Gaps = 2/245 (0%) Query: 6 FCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRE 65 I+ EI ARP+Q AA+ LLDEG TVPFIARYRKE+TGGLDDTQLR+L RL YLRE Sbjct: 8 LAARISAEINARPDQAKAAIELLDEGATVPFIARYRKEVTGGLDDTQLRDLAERLVYLRE 67 Query: 66 LEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEAGLEP 125 LE RR I++SI+ QGK+TD+L + +K ELEDLYLPYKPKRRTR +IA E GL P Sbjct: 68 LEARRDTIVESITAQGKMTDELMTKVAGAATKAELEDLYLPYKPKRRTRAEIARERGLGP 127 Query: 126 LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLW 185 LA+ + ++ P V A ++ AD V D K AL+GAR I+ E AE+A LL ++R ++ Sbjct: 128 LAEAILAERGREPAVLAEGFITAD--VTDVKTALEGARDIIAEGIAENADLLGRLRAHMR 185 Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 + + L + VV GK+ G KF DYFDH E +T P HRALAM RG NE VL L++ AD + Sbjct: 186 QASLLKARVVDGKQAAGEKFSDYFDHSERWATAPGHRALAMLRGWNEEVLTLTIEADAET 245 Query: 246 DEPPK 250 P K Sbjct: 246 LSPNK 250 >UniRef50_C1MUJ5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MUJ5_9CHLO Length = 505 Score = 264 bits (674), Expect = 1e-68, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 162/258 (62%), Gaps = 10/258 (3%) Query: 328 ATMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAA-------MTVAALCEKHNV 380 +G+DP RTG K+A VDATG +VAT +Y + A + A E H Sbjct: 6 VVVGVDPAFRTGCKLAAVDATGAVVATGVVYLPGFEPRGARTPGTPAPAALRAFVEAHGA 65 Query: 381 ELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSL 440 +AIG+G +RE E+ D +VSEAGASVYSAS LA +E P LDVS Sbjct: 66 TAIAIGDGQGTREAEKLVAD---ANLGDAVGWRVVSEAGASVYSASPLAVEELPSLDVSS 122 Query: 441 RGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT 500 RGAVSIARRLQDPL+ELVKIDP+S+GVG YQHDV + +LA +L AVVE V GV++NT Sbjct: 123 RGAVSIARRLQDPLSELVKIDPQSLGVGLYQHDVKEAELAGELSAVVESAVAEAGVNVNT 182 Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS LL RV GL++ +A I + RD NG F +R LL+V LG K F QCAGFLR++ Sbjct: 183 ASASLLARVPGLSKSIAGKIASHRDANGAFADRAGLLRVRGLGAKTFTQCAGFLRVDGAA 242 Query: 561 NPLDASTVHPEAYPVVER 578 + L+ ++VHPE+Y + Sbjct: 243 DALEMTSVHPESYDLARA 260 Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 40/103 (38%), Positives = 52/103 (50%), Gaps = 11/103 (10%) Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 D R + + T DL G +L+G V NV FGAFVD+GV GLVH S+L Sbjct: 401 DRRGADRASLLRTHAATAKDLGVGDVLDGVVRNVVPFGAFVDVGVGDSGLVHRSTLGAGS 460 Query: 688 VE-----------DPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +PH V +AG V+VKV +DL R RI+L + Sbjct: 461 AGAGGGGGGRGRPEPHDVFRAGQSVRVKVTGLDLARGRISLAL 503 >UniRef50_Q22BP0 Zinc knuckle family protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q22BP0_TETTH Length = 1504 Score = 260 bits (663), Expect = 2e-67, Method: Composition-based stats. Identities = 121/847 (14%), Positives = 258/847 (30%), Gaps = 155/847 (18%) Query: 12 GEIQARPEQVDAAVRLLDEGNTVPFIARYRK-EITGGLDDTQLRNLETRLSYLRELEERR 70 +I + L + V +I Y+K E D L L + ++ Sbjct: 284 NDINFHSKIFSFLQSLHLDKEEVMYIYTYKKNEFHPQFDLEDLWRLYDLDGEWAQFNRQK 343 Query: 71 QAILKSISE------------QGKLTD-----DLAKAINATLSKTELEDL--YLPY---- 107 IL I + Q + D + + + + L+ + Y Y Sbjct: 344 NRILLQIQQLRRELENTPLLIQNNIIDFEQVRKVEEFFHKAIDTQSLKFIKEYFDYLFIK 403 Query: 108 ------------KPKRRTR----GQIAIEAGL--------EPLADLL-----WSDPSHT- 137 + R+TR L + L L + P Sbjct: 404 IYPQKEHQRLKIRKDRKTRMINTYIQCKVHKLVSTLTLSPQDLVKNLEEMNQINQPQLQQ 463 Query: 138 --PEVAAAQYVYADKGVADTKAALDGAR---YILMERFAEDAALLAKVRDYLWKNAHLVS 192 P+ A + + V K A++ L L + + + + Sbjct: 464 NKPQAYADNLISENPNVPCMKEAIEALECMVDYLSNELFNYPPLKKWYYEMFKQKCLIST 523 Query: 193 TVVSGKEEEGAKFRDYFD----HHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEP 248 +++ F + H P ++ L + + + + + D Sbjct: 524 EPTDLGKKQIDMFHPLYPAKRIHKRPYTSFTDDTWLLLEEAERLNFITVKIFLKSENDNN 583 Query: 249 PKESYCEQIIMDHLGLRLNN---------APADSWRKGVVSWTWRIKVLMHLETELMGTV 299 + I+ + + L N + + +RK + L + ++ + + Sbjct: 584 SDNNSIFDIMSKNYMISLKNLEAQIKQINSEWNFFRKYNIENVCDKFFLPYAQSLVRIEL 643 Query: 300 RERAEDEAINVFARNLHDLLMAAPAGLRATMGL--DPGLRTGVKVAVVDATGKLVATDTI 357 E AE ++ + ++++ P M + D R GV VD G + + Sbjct: 644 HENAEKWVVSQCQQKFYNMINVEPQKNGKIMSVVQDTNGRIGV--VFVDENGIPNNSMIL 701 Query: 358 --YPHTGQAAKAAMTVAALCEKH---------NVELVAIGNGTASRETERFYLDVQKQFP 406 + + E+H +L+ + S E++R + +++ Sbjct: 702 NYFTKKEDQLSTKARLEKTQEEHELEIKFKSFGPQLIVVAAN--SIESQRLKNLLHQKYE 759 Query: 407 KVTAQKVIVSEAGASVYSASELAAQE---FPDLDVSLRGAVSIARRLQDPLAELVKIDP- 462 K + + + + D LR A+S R L +P AE++ + Sbjct: 760 KSQSYIQYGDDTIPQIVAKQPTIQGPGNTLQFKDSVLRVALSQGRILLNPTAEILSLWND 819 Query: 463 -------KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNT-----ASVPLLTRVA 510 I + Q +S +L L+ VN +GV+++ LL V Sbjct: 820 NVQQNGCLHIPLHPSQEYISLDKLQYSLEKCCVQIVNFMGVEMDMLQDQPHLKHLLQHVC 879 Query: 511 GLTRMMAQNIVAWRDENGQF--------QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP 562 GL A ++ ++N + R L+ + F+ GF+R +P Sbjct: 880 GLGPRKALKLIELLEKNAVIFEKEKEVPKKRGLLITQLDIKDVVFKNINGFIRFRFSKDP 939 Query: 563 LDASTVHPEAYPVVERILAAT-----------QQALKDLMGNSSELRNLKASDFTDEK-- 609 ++ + ++ + Y + ++I + + ++ +M N + + D+ + Sbjct: 940 IEKTRINKDLYKIAKKICRDSADNFQIKSQSDEDIVEYVMKNPKYIDAMDLEDYAQQLEE 999 Query: 610 -----FGVPTVTDIIKELEKPGRDPRPEFKTAQ-----FADGVETMNDLQPGMILEGAV- 658 P + + EL P R ++ F E+ + GMI+ + Sbjct: 1000 MKNQPNMAPVLDFVKDELINPFSYKRNTYEAISDQDLFFKMIKESPQTFRKGMIVSAKII 1059 Query: 659 -------TNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV-- 708 + V I + +S + K GDI+K V ++ Sbjct: 1060 QIRPKENQQIKQHQLLVKIVDNDLKSSILVSE-------EESKNYKVGDIIKAYVDQIFV 1112 Query: 709 -DLQRKR 714 D +R + Sbjct: 1113 LDNKRSK 1119 >UniRef50_D0JXD7 Putative uncharacterized protein n=1 Tax=Yersinia pestis D182038 RepID=D0JXD7_YERP1 Length = 264 Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats. Identities = 160/201 (79%), Positives = 171/201 (85%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 MN+ RIIA E+QARPEQV +A+RLLDEGNTVPFI+RYRKE+TGGLDD QLR LE+RL Sbjct: 1 MNEPLSRIIASELQARPEQVISAIRLLDEGNTVPFISRYRKEVTGGLDDIQLRQLESRLG 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 YLRELE+RRQ ILKSI +QGKLTD LA AINATLSKTELEDLYLPYKPKRRTRGQIAIEA Sbjct: 61 YLRELEDRRQTILKSIEDQGKLTDQLAGAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA+ LW DP PE A YV ADKGVADTKAALDGARYILMERFAEDA LLAKVR Sbjct: 121 GLEPLAERLWQDPQQDPEHTALAYVDADKGVADTKAALDGARYILMERFAEDATLLAKVR 180 Query: 182 DYLWKNAHLVSTVVSGKEEEG 202 YLWKNAHLVS VV K + Sbjct: 181 QYLWKNAHLVSKVVEVKSRKA 201 >UniRef50_P95845 CTORF239 (Fragment) n=1 Tax=Staphylococcus aureus RepID=P95845_STAAU Length = 239 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 78/240 (32%), Positives = 130/240 (54%), Gaps = 1/240 (0%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M++ I + Q +Q++A + LL+E NTVPFIARYRKE TGGLD+ Q++ ++ Sbjct: 1 MDNQLINSIIEKYQFSKKQIEAVLTLLEEKNTVPFIARYRKEQTGGLDEVQIKQIDDEYQ 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 Y+ L++R++ ++K+I +QG LT++L K I +EDLY P+K K++TR A Sbjct: 61 YMVNLQKRKEEVIKNIEQQGLLTEELKKDILKQNKLQRVEDLYRPFKQKKKTRATEAKRK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA H + + ++ V + A+ GA+ I+ E+ +++ K+ Sbjct: 121 GLEPLAIW-MKARKHEVSIEEKAQQFINEEVQSVEDAIKGAQDIIAEQISDNPKYRTKIL 179 Query: 182 DYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNA 241 ++ L ++ E+E F Y+ + EP+ + +HR LA+ RG E VL Sbjct: 180 KDMYHQGVLTTSKKKNAEDEKGIFEMYYAYSEPIKRIANHRVLAVNRGEKEKVLSAKFEF 239 >UniRef50_B0EV07 Transcription elongation factor spt6, putative n=2 Tax=Entamoeba RepID=B0EV07_ENTDI Length = 1230 Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats. Identities = 139/825 (16%), Positives = 276/825 (33%), Gaps = 127/825 (15%) Query: 35 PFIAR-YRK-EITGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAI- 91 P+I+R Y K + LD L + + ++ + + + E + +A+ Sbjct: 241 PYISRDYSKIDSYQVLD--MLWMIWNFDEEYSIFCKEKEKVKEGLKE----IPEERRALY 294 Query: 92 -NATLSKTELEDL---------------YLPYKP--KRRTRGQIAIE---------AGL- 123 S EL DL + P K K + Q+ I+ GL Sbjct: 295 SVELDSVVELPDLKLISDDFLLRYGKDQFDPLKQISKGKKSYQVLIQKNFKEMLDGFGLT 354 Query: 124 -EPLADLLWSD-----PSHTPEV-AAAQYVYADKGVADTKAALDGARYILMERFAEDAAL 176 + LA + S+ P PE+ A + + K + GA+ I FA + + Sbjct: 355 ADELAQNIKSNFKKTIPKMCPEIPQAIAARMVNPEFPEPKNIMSGAKMIFATEFAYNWYV 414 Query: 177 LAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTVPSHR-ALAMFRGRN 231 + K+A L + +E F Y +P+ + L +F N Sbjct: 415 RKFFFEEGLKDAELSTDPTQKGDEVINVFHKYAIIKRLRRKPIGLIRGKTDILNIFNAVN 474 Query: 232 EGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHL 291 EG+L +++ E L + ++K + + ++ + ++ Sbjct: 475 EGLLTMTIEIPQNIIEN---------ASTLLVGGDDLEEWRKYKKETLEFAFKYFITPYV 525 Query: 292 ETELMGTVRERAEDEAINVFARNLHDLLMAA----------------PAGLRATMGL--D 333 +L +R+ A D I+ NL + A + G+ Sbjct: 526 VEQLKIELRKEAVDCLIHEAQYNLKRRIDVAQHFALGKYSKDISNISTLEKKFVGGIVFS 585 Query: 334 PGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRE 393 GVKV + TG+ + +T + + + + + +G Sbjct: 586 KEGMMGVKVNAM--TGEFIEGKYFGKNTSKYGEYEEELKKF---FGRDTLVVG---IEAN 637 Query: 394 TERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDP 453 T+R+ + V +++ +Y + E +L+ + R+L +P Sbjct: 638 TQRYVSVTATMKNNSDIECVGINKDLGRIYK--KETKGELSELEF---AGACVCRQLINP 692 Query: 454 LAELVKI-----DPKSIGVGQYQHDVS---QTQLARKLDAVVEDCVNAVGVDLNTASVP- 504 +AE V I SI + Q+ ++ Q ++ L+ + +N+ GVD+N Sbjct: 693 IAEFVHICCTKEKMLSIKLHWLQNTLNESEQNKMFSALNETLITIINSKGVDINQCIEYP 752 Query: 505 ----LLTRVAGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLG--PKAFEQCAGFLRIN 557 +L V GL + + I + R + + +R+ L + + + C GF+ I+ Sbjct: 753 HMEKMLDYVNGLGPIRSDYIFSHFRQYDFKVTSRKFLNETFKTDKLETVVDNCIGFIIIS 812 Query: 558 HGDNP----LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT------- 606 + LD + +H Y + E I+ + + + ++ L D+ Sbjct: 813 PKYSSKNLYLDQTRIHFSRYGLAETIVDDAFTGKRPIDDFTKKVMVLTREDYNRLDLEGY 872 Query: 607 ---DEKFGVPT---VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 +E+ G + DI+ EL +P + + A E + I E Sbjct: 873 GKENEEKGHSIYICIMDIVNELIEPFKYQQASLAEAM-MKDEEIFESVTNSSIQEFKKNQ 931 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV--VKAGDIVKVKVLEVDLQRKRIALT 718 + F + G IS +ED + V++G + K++ VD + I + Sbjct: 932 LIEFVLKPGSRERKKGY--ISEDLEVSIEDSINLNGVESGTTITGKIMTVDYGKCIIDVR 989 Query: 719 MRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMD 763 D + + PR E + D Sbjct: 990 CGNDVVNDYQYLENEYRQLQEKEKYLEVYPREYEHEKKEEVNRKD 1034 >UniRef50_A9V9Y8 Predicted protein n=2 Tax=Fungi/Metazoa group RepID=A9V9Y8_MONBE Length = 1839 Score = 242 bits (618), Expect = 4e-62, Method: Composition-based stats. Identities = 109/720 (15%), Positives = 229/720 (31%), Gaps = 126/720 (17%) Query: 33 TVPFIARYRKEITG---GLDDTQLRNLETRLSYLRELEERRQAILK----SISEQG---- 81 VPFIA +RKE G L+ L ++ L E+ +++ + + Sbjct: 502 EVPFIAHFRKEKVGFPSVLNYHDLWLVQEYDQRFHMLHEQHARLIRQTDHLLKKLERDAN 561 Query: 82 ----------KLTDDLAKAINATLSKTELEDL--YLPY---------------------- 107 + + + S E++D+ +L + Sbjct: 562 AGSAPSHRATLIDNKFLNYLYGIKSDEEMKDVRAFLRFFYDDLLQELNTGSGSQSHDDQA 621 Query: 108 -----KPKR-RTRGQIAIEAGL---------------EPLADLLWSDPSHTPEVAAAQYV 146 + +R +R + GL E + + P Q Sbjct: 622 ETHASRQRRITSRYHHSESVGLTASMSCFGITLPQIVENILNGFQLHEVQAPAEDIFQVA 681 Query: 147 YADKGVADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKF- 205 + D + ++ ++ L A+ A+ R+ + + A L + K+ Sbjct: 682 MSCPVNIDVEEIVNRLQHCLAREIAQHPAVRGHFRERIRRMALLTVRPTKKGFQLIDKWD 741 Query: 206 ---RDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHL 262 + F ++P+ T+ L + +G+ G+L+ S +++ + + Sbjct: 742 VLAKYRFLTNKPVDTLNDDTFLWLIKGKRAGLLEYSFAVSDHTATEIEQAILGALQFTVM 801 Query: 263 GLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAA 322 +V R +L+ + E+ + AE A + + + A Sbjct: 802 DDMALK--WKPHINAIVRDCVRDMLLVDMIEEVEKKLTAEAELFVEEQCANFVRNFVSRA 859 Query: 323 PAGLRATMGLDPGLRTGV--------------KVAVVDATGKLVATDT-----IYPHTGQ 363 P ++ G GV + ++ G +V H Sbjct: 860 PFQPD--FAVEEGREDGVRVTACILGDMGEASFLVHLNGYGDVVDFIKLDNLGFSEHARN 917 Query: 364 AAKAA------MTVAALCEKHNVELVAIG-----NGTASRETERFYLDVQKQFPK-VTAQ 411 A + + +++ +G R +++++ Sbjct: 918 ERDAQRRRDDNERIKNFLLLNVPDVLVVGADRQPALHLHRTFGDMVRNIREEVEDFPPVS 977 Query: 412 KVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKI-----DPKSIG 466 +V A +Y+ S + +EF + SL A+ + R++Q+P + + D I Sbjct: 978 VELVETQVAELYARSVPSKKEFAEYHFSLITAIGLGRQVQNPELMMATLYNEDEDFLHIS 1037 Query: 467 VGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS-----VPLLTRVAGLTRMMAQNIV 521 + Q +S+ +L KL + VN +DL A+ L + GL + A ++ Sbjct: 1038 MHPLQEFISKDRLRTKLIQEMSVAVNRSCIDLVAAASKPQLANALQFICGLGKHKAAALL 1097 Query: 522 -AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP--------LDASTVHPEA 572 R +F R+QL + LGP + FL ++ + LD +HPE+ Sbjct: 1098 SHLRPTVREFHGRRQLADMEGLGPCTAYNASAFLIVHPSPDYDEPEQSSRLDELLIHPES 1157 Query: 573 YPVVERILAATQQALKDLMGNSS--ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 Y +I + + + +L N D+ G + + L R + Sbjct: 1158 YKYATKICMDAVGYSEHIGEDEDANQLANEAIGKILDDASGREKLERLDNSLADYNRYLQ 1217 >UniRef50_Q7JQ89 CnjB protein n=3 Tax=Tetrahymena thermophila RepID=Q7JQ89_TETTH Length = 1748 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 72/590 (12%), Positives = 194/590 (32%), Gaps = 83/590 (14%) Query: 50 DTQLRNLETRLS-YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTE-----LEDL 103 + Q R + L +L ++ + R+ + I + + + + E + DL Sbjct: 338 EIQARKVSDLLQSHLTKINQAREYNIPQI---------IYQYFDDSSCCAEMLFPKITDL 388 Query: 104 YLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAAL---D 160 PYK + + + + L + E ++Y + + L + Sbjct: 389 -APYKEEYEAKFNPIRQQ----ASQKLINQMEIYNEENLLSHIYQNYTQLSQQERLNLSE 443 Query: 161 GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDH-------HE 213 + + F + + + D K A L ++ + F Y + + Sbjct: 444 LIQDYICIDFLYNPIIKKFIIDNYMKYAVLSTSP----QAHVIGFNIYHEFFAAKKIIKK 499 Query: 214 PLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADS 273 PLS + S+ L + + + +++ + Q D+ Y E L + +S Sbjct: 500 PLSEITSNEFLTILQASQQNLIECKILLPWQIDQGEDLIYREISQHFQPHLASKSESLNS 559 Query: 274 WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPA--------- 324 + + ++ + + + + ++ + ++ E ++ + + P Sbjct: 560 YTQNLLQRLLKNYLYPYAQQQVYKHLENKSLTEVRDICVSKFKEYISYGPYLIRDRQDQL 619 Query: 325 -GLRATMGLDPGLRTGVKVA-VVDATGKLVATDTI--YPHTG-----QAAKAAMTVAALC 375 + +G+ ++ GK + + + Y + + + + Sbjct: 620 VKPETILSFYVHESSGIVGVSMISQDGKEIHKNCLEYYFNADKLVSQKREQEIKNLYEFI 679 Query: 376 EKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASE-------- 427 ++ + + ++ QF + ++ + + Y Sbjct: 680 RNRQPYVIIVSSN--CSRALVLKSNLYIQFKNLCRNILMCEQTLMTCYLNQSSFIQSPKD 737 Query: 428 ----LAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKL 483 LA ++ L S+ +PL E I + +Q V + +L + Sbjct: 738 KYIFLARKQAKAFQFRLLEVCSLWNYESNPLLE--------IKLHPFQKKVDKKELQIRF 789 Query: 484 DAVVEDCVNAVGV------DLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQ---NRQ 534 + V+++ + G+ D N + L + G + ++ ++ F+ +R+ Sbjct: 790 EQVIQERICQDGLEFKTLFDKNLSFKDCLQFIPGFGPRKSHFFISQFEQGKDFKEITSRK 849 Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ 584 + ++++ +G C F+ + DN LD + + Y +V I+ Sbjct: 850 KCIQLNLMGENLIVNCMAFMMFSKSDNLLDQTKIPYNQYFIVNHIVETID 899 >UniRef50_A2EUK7 SH2 domain containing protein n=1 Tax=Trichomonas vaginalis RepID=A2EUK7_TRIVA Length = 1360 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 109/730 (14%), Positives = 228/730 (31%), Gaps = 146/730 (20%) Query: 1 MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGG--LDDTQLRNLET 58 +M+ F GE V+ L +E +T FI YRK I + D + +++ Sbjct: 183 IMDQHFKTRGGGERDI-EALVEVLKELHNEKHTPQFIINYRKNIYRDTVIGDEDIYHIQN 241 Query: 59 RLSYLRELEERRQAILKSISEQGKLTDD---------LAKAINATLSKTELEDLYL---- 105 + + E+R I I G +D L I + L+DLY Sbjct: 242 AIREFKIFSEKRIRIQPLIEHLGLTSDPSDDDQKTAMLRHFIRNADDTS-LDDLYNFDEL 300 Query: 106 ---PYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVYAD--KGVADTKAALD 160 P + T + E + D P + + D + D + AL Sbjct: 301 QMNPETTPKNTTFKRNAEY-FQAYIDKFIYSPMDFVHILSLNSSLNDPPEPQTDPQQALQ 359 Query: 161 GARYIL----------------------MERFAEDAALLAKVRDYLWKNAHLVSTVVSGK 198 L ++ A + +R + + + + Sbjct: 360 SWHDELSTNYPSVFPNIEVMTRQMVGFAAKQLATHPLFIDMLRTRFSPHIVINTQPTTSG 419 Query: 199 EEEGAKF------RDYFDHHEPLSTV-PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE 251 + + ++P+ + + + L + G L +++ D D+ +E Sbjct: 420 AKSSMMYPKGKYGSIKRLKNKPIISFNKTDKWLLIVEAFQSGNLTYTIDTDKGIDKEIEE 479 Query: 252 SYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVF 311 I +R + DS RK ++ + + + E +++ AE N Sbjct: 480 ------ISTKYRMRYPSD-WDSLRKDILQMAIKDFIWPQIVKETEDELKKNAEKFVCNEI 532 Query: 312 ARNLHDLLMAAPA-----------GLRATMGL---DPGLRTGVKVAVVDATGKLVATDTI 357 L L + P + + + + + A+V+ G ++ + + Sbjct: 533 ETRLFSHLTSPPYTQLSTSQPYILKSQKILAMHYTSDDTKRKIYAAMVNEKGNIIDSLYL 592 Query: 358 YPHTGQAA----------------------------KAAMTVAALCEKHNVELVAIGNGT 389 + + K+ + + E H+ ++AI Sbjct: 593 HSKIIDSKVIVNWDDPDKQIKEGSANNLAANDLEVIKSKVALVKFIETHHPPVIAI--TA 650 Query: 390 ASRETERFYLDVQKQFPKV------TAQKVIVSEAGASVYSASELA-AQEFPDLDVSLRG 442 + ++ + + + ++ A +Y+ S E +L R Sbjct: 651 SCLKSASLVHAIVELVHSRIQPESNRPRVLLAPVEHAILYAHSRDCCKAELHELPKDKRA 710 Query: 443 -------AVSIARRLQDPLAELVK-IDPKS-----IGVGQYQ-----HDVSQTQLARKLD 484 A S ARR+Q+P+AEL + I PK + +Q ++ + + +A+ ++ Sbjct: 711 DGAEFLIAASTARRMQNPMAELCRLITPKKNHLTDWAMTPFQSVFSGNNDNTSPVAQAIE 770 Query: 485 AVVEDCVNAVGVDLNTASVPL-----LTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK- 538 + GVD+ A + + GL A+ I+ ++ + R +L Sbjct: 771 RACLRAIALTGVDMTAAISNPNLRSTVQFIPGLGPHTAEKIIDIAQKDN-IKQRSKLRSA 829 Query: 539 VSRLGPKAFEQCAGFLRINHG-----------DNPLDASTVHPEAYPVVERILAATQQAL 587 + + F+R +N LD + + + Y IL Sbjct: 830 LHEFDDMVVKNALPFIRFPMENKLNDDHSLEDNNYLDGTLIPMDEYNTAMDILKRGFFES 889 Query: 588 KDLMGNSSEL 597 + + N EL Sbjct: 890 QYIETNIIEL 899 >UniRef50_A0DQ53 Chromosome undetermined scaffold_6, whole genome shotgun sequence n=2 Tax=Paramecium tetraurelia RepID=A0DQ53_PARTE Length = 1501 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 121/855 (14%), Positives = 263/855 (30%), Gaps = 179/855 (20%) Query: 54 RNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRT 113 R + L + + +Q + + +++ L + + N EL++L L K K T Sbjct: 286 RRIVYLEQELERVNQEKQLLGERMNQDQTL-EQEQASFNTDNIVKELQNLSLNAKKKPHT 344 Query: 114 RGQIAIEA---GLEPLADLLWSDPSHTPEVAAAQYVYADKGV------------------ 152 + + E ++ A + V ++ Sbjct: 345 KEKAMQEFFKQRVDEAALKFCYTSDELFSKLQGKSVQVNRKFIQDLEELWSHQANTTEFK 404 Query: 153 --ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFD 210 + + + LM + + + + + + +E ++ Sbjct: 405 SQDSSAEYVKLLQKYLMNELYHHPFIRSFMSQIYRDHLLISTEPTQLGNKEITAVSYFYP 464 Query: 211 ----HHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGL-- 264 H + + R G + +S D ++ + I++ Sbjct: 465 VKRIRHRQYKYMEDQTWMQCLRAEQLGYINISFTVSKDKDHKKEKIPRDDIMVLLYDKFV 524 Query: 265 -----RLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLL 319 + +R ++ + LE ++ ++ + + + + L+ Sbjct: 525 KIDDQQKEQESIMRFRDLILRGILQELWYPILEKQIKQKLQTLSTKHIVRMCQQKFKSLI 584 Query: 320 MAAPA-------GLRATMGLDPGLRTG---------------------------VKVAVV 345 P LR + +P ++ + +A++ Sbjct: 585 NKQPHISELANNQLRQQLITNPDVKIMSLVIGQEQSDGKLLKTYSQDCSIQKKCIGMAII 644 Query: 346 DATGKLVATDTI-YPHTG--------QAAKAAMTVAALCEKHNVELVAIGNGTASRETER 396 D G+ + Y Q K + + + EK+ +LV I + + + Sbjct: 645 DYKGEQQSLQIFNYLTQDERRTEMLEQIRKEQVLLDSFFEKYKPDLVVISANHS--DCLK 702 Query: 397 FYLDVQKQFPKVT-AQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLA 455 D++K++ + + Q + + +YS SE + + PD L+ A+S+AR +P+A Sbjct: 703 LRADLRKKYKQTSSVQITLADSQISRIYSMSEKSNLQSPDTPQILKEAISLARYKLNPMA 762 Query: 456 ELVKIDP--------KSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTAS----- 502 E++ + + + Q VSQ L L + VN VGVDL + Sbjct: 763 EVLNLWSDAIDKNGCLHLNLHPLQSMVSQQVLLDALKQTATEIVNQVGVDLVDCTLHKHL 822 Query: 503 VPLLTRVAGLTRMMAQNIVAWRD---ENGQFQN-----------------------RQQL 536 + V GL R A++++ F N RQ + Sbjct: 823 ADQMQFVNGLGRRQAKHLITMVKGLLSKSLFNNNYEDERLIYSKLEQDQKEYIQIERQDI 882 Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAAT----------QQA 586 LK L F+ GF++I G PLD + + + Y I Sbjct: 883 LKTQILKKVVFKNVQGFIKIQRGIQPLDITRMQIKMYSDAVHIARCALEVGGRDDKQNTV 942 Query: 587 LKDLMGNSSELRNLKASDFTDEK-------FGVPTVTDIIKELEKPG------RDPRPEF 633 ++ LM ++ +L+ D+ ++ + +EL P + Sbjct: 943 VRQLMSQPHKMEDLQLEDWAKQRELRDGSEKFTLVAQFMKEELANPFLYKFDTSNKDMSN 1002 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG---LVHISS---LSNKF 687 +A E+ + +++G +T ++DG L+ +S+ Sbjct: 1003 SEIFYAITQESPYTFRKNSVVQGLITKKLESR-----DRNKDGDRLLIKLSNNGLCGTLR 1057 Query: 688 VED-PHTVVKAGDIVKVKVLEV----DLQRKR--------------------IALTMRLD 722 ED G IVK V + + + I L+++ D Sbjct: 1058 KEDMLEQEFGIGQIVKAYVKRIPATENYNKNESLNISTLENNNKTDNFHILFIELSLKPD 1117 Query: 723 EQPGETNARRGGGNE 737 Q + + + + Sbjct: 1118 WQRWDQDYLKPPKYD 1132 >UniRef50_A8J804 Glycine rich protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8J804_CHLRE Length = 1032 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 118/717 (16%), Positives = 208/717 (29%), Gaps = 128/717 (17%) Query: 123 LEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVRD 182 LEP A L + V A + + D A GA L R E+ + + + Sbjct: 215 LEPSAFLANLQEAGHAGVGANEPRTPPGAILDWAA---GALESLKARHPENPIISSYSPE 271 Query: 183 YLWKNAHLVSTVVSGKEEEGAKFRDY----FDHHEPLSTV-PSHRALAMFRGRNEGVLQL 237 L A + + E F Y + L+ S L + E + L Sbjct: 272 SLVSAAVVSAEATEAGEAVLDPFHKYALATRLRKKRLADFGSSDLFLRLDEAARERLASL 331 Query: 238 SLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMG 297 L+ + E E G + R+ VV ++L Sbjct: 332 RLHLESAAAEKLVNDVAELFQSSDRG--AVAQQWNGLRRDVVKAALEEQLLPAFRAHFHA 389 Query: 298 TVRERAEDEAINVFARNLHDLLMAAPA-----GLRATMGLDPGLRTGVKVAVVDATGKLV 352 + A + A+ L D +A+P + G V ++ G L Sbjct: 390 KLLAEAREHALR-----LEDEFLASPRLCIVCYGNQELNPATGQPNNTAVVFLNELGNLT 444 Query: 353 AT-----------------DTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGT-ASRET 394 ++ ++ AA L E H V +G A R+ Sbjct: 445 DFFFAGQLSGQIRRSGQGAGAVFTDPAKSKDAARIREKLLE-HLPHAVLVGIAAPACRQL 503 Query: 395 ER-----------FYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGA 443 + D + E A+++ S E + +R A Sbjct: 504 HEDMRNIVDSLLEHHADALIDHETRGITVFPMDEKLAALWEVSAAGRSELREHAPLVRRA 563 Query: 444 VSIARRLQDPLAELVKI-----DPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL 498 V + R DPL+ L + + S+GV Q + + + V+ VGVD+ Sbjct: 564 VGLGRSALDPLSLLAALCGPDKEVLSLGVYDMQDALGKDDRMAAVTRVMVTAGAQVGVDV 623 Query: 499 NTAS-----VPLLTRVAGLTRMMAQNIVAWRDEN-GQFQNRQQL-LKVSRLGPKAFEQCA 551 N A LL V GL A ++A N + ++R L + LG F C Sbjct: 624 NLACNVAWRSELLQFVPGLGPRKAGALLAALQRNRNKAESRSMLYKDLGVLGKVVFRNCG 683 Query: 552 GFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFG 611 +L E++ + E+ ++ K L G Sbjct: 684 AYL--------------RIESFDL-EKFMSDAAAEGKPLP------------------VG 710 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 +PT+ DI+ EL P + RP ++ T L+ + I Sbjct: 711 LPTLIDIVAELVCPAMELRPAWQEISPRQVKITYVTR---DCLKVIL-----------IN 756 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIV---------KVKVLEVDLQ--------RKR 714 +G+V +S + V + +++ ++ Q R Sbjct: 757 SGTEGMVPAEEVSGSYTGRVGG--PEWQAVMQSRLNSVARGRIIRIEEQPDQSGSGTRFM 814 Query: 715 IALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGK 771 + L+ + E + N + A+ + A + + Sbjct: 815 VVLSTKSSVVNDEGGEYERKYCASREPNYVVREKTEATAKRRADEAGRSREQTVLVR 871 >UniRef50_UPI0001968DE9 hypothetical protein BACCELL_04150 n=1 Tax=Bacteroides cellulosilyticus DSM 14838 RepID=UPI0001968DE9 Length = 197 Score = 207 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 2/199 (1%) Query: 2 MNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLS 61 M F R+I+ + +Q+ + LL++G T+PFI+RYRKE TGGLD+ Q+ ++T Sbjct: 1 MIQLFHRMISAALGISEKQIGHTLDLLEDGATIPFISRYRKEATGGLDEVQIEAIKTHYE 60 Query: 62 YLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIEA 121 L E +R++ I+ +ISEQGK+T +L K I+ T T LED+YLPYKPKRRTR ++A + Sbjct: 61 KLNETAKRKETIINTISEQGKMTPELQKRIDETWDSTILEDIYLPYKPKRRTRAEVARQK 120 Query: 122 GLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKVR 181 GLEPLA LL PE A YV + V D + AL GAR I+ E+ +ED VR Sbjct: 121 GLEPLATLLMLQREPNPEKRAEAYVKGE--VKDAEDALKGARDIIAEQVSEDEQARNTVR 178 Query: 182 DYLWKNAHLVSTVVSGKEE 200 + K Sbjct: 179 FAFLPASRHHRQSSERKRN 197 >UniRef50_Q7UEV9 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica RepID=Q7UEV9_RHOBA Length = 1257 Score = 204 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 84/379 (22%), Positives = 150/379 (39%), Gaps = 17/379 (4%) Query: 210 DHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNA 269 P + + S + + + R V Q + + D + N Sbjct: 410 GKSMPANKLSSFQLVMLGRALRSQVAQCAFDYDAAKLVAELQK---------TAAGFNRP 460 Query: 270 PADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRAT 329 AD V+ + E ++E+A +++ A NLH + + Sbjct: 461 LADRLSGLVLEN--EAIIRDAAEAAWWDELQEQASARLVSIAADNLHSQINRGGVEAKVV 518 Query: 330 MGLDP-GLRTGVKVAVVDATGKLVATDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIG 386 M +D G RT ++V + G+L+ ++ I A + A + L H+V+L+ I Sbjct: 519 MSIDAVGPRTAAT-SIVSSDGRLLHSEDIPCQLSAAMRTLAVTKMGELIHAHHVDLIVIS 577 Query: 387 NGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSI 446 NG A R ++ KQ + + + +GA Y+ QE R A I Sbjct: 578 NGPARRACMIAVGELIKQSADKSVRWTLADRSGADAYAGGPAGDQEMKSTPRRFRAAAWI 637 Query: 447 ARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLL 506 A P LVK+DP + +G +Q ++S + L+ V+ GVD+N+ + + Sbjct: 638 AFSAMQPAQALVKVDPLKLRLGSFQRELSDDAVLSALEDVMVSGAARGGVDVNSTATTWM 697 Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK-VSRLGPKAFEQCAGFLRINHGDNPLDA 565 R+ G+T ++Q I R E +R+ L V Q FLR+ + LD Sbjct: 698 QRLPGITPDISQAIDERRREK-LIASREDLATAVEWPSVVNSRQAMPFLRVFASEETLDG 756 Query: 566 STVHPEAYPVVERILAATQ 584 + +HP+ YP+ +++ A Sbjct: 757 TLIHPDDYPLAKKLATALN 775 Score = 99.8 bits (247), Expect = 4e-19, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 17/198 (8%) Query: 10 IAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQLRNLETRLSYLRELEER 69 IA + + A+ L+++G T PF++RYR++ G +D+ L NL + ++L+E Sbjct: 8 IAQRGRCEVSSLRLALPLIEQGYTPPFLSRYRRDELGDIDEASLWNLAHAVRTQKKLDEY 67 Query: 70 RQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRT-----RGQIAIEAGLE 124 R + ++ + + +AI SK L+ L + K T Q L Sbjct: 68 RSDLQEAWKQTPLADPAIGRAIGNAQSKRLLDRLSR--RVKLETGESANLAQRLAVRTLN 125 Query: 125 P----------LADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDA 174 P LA+ L ++P+ A + + D AL + +R D Sbjct: 126 PQKGDGEDLKALAESLAAEPAAVETTAEGEAASPEPASNDVDGALAKLDATIAKRLIGDP 185 Query: 175 ALLAKVRDYLWKNAHLVS 192 ++ +L +NA + Sbjct: 186 RIVGAAVRWLSRNAKIRV 203 Score = 92.1 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 63/127 (49%) Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + G +++ L P + E + + ++++L+ G + G V V FG F+ Sbjct: 940 QIGKRRSHQLVRWLCDPFGEGASEGEAPAVMTAMPSLSELKQGDQVIGVVVGVMPFGVFI 999 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 ++ GL+H+S +S+ +VED H V+ GD++ V D +R+R+AL+ E+ Sbjct: 1000 ELSPDCSGLIHVSRISDSYVEDLHEAVQVGDVITAWVTGTDAKRRRVALSAISPEREAAM 1059 Query: 729 NARRGGG 735 +RR Sbjct: 1060 ESRRQNE 1066 >UniRef50_B4BRE9 RNA binding S1 domain protein n=3 Tax=Bacteria RepID=B4BRE9_9BACI Length = 239 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 105/228 (46%), Positives = 138/228 (60%), Gaps = 3/228 (1%) Query: 500 TASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHG 559 TASV LL V+GLT+ +++NIV R+E G+F++R +L + RLG K +EQC GFLRI G Sbjct: 12 TASVSLLQYVSGLTKTVSENIVKRREEQGKFRSRDELKTIPRLGAKTYEQCIGFLRILDG 71 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGNS--SELRNLKASD-FTDEKFGVPTVT 616 + PLD + +HPE Y V+R+L + N L+ L + G T+ Sbjct: 72 EEPLDRTPIHPERYVEVKRLLQTLGFTTDAIGSNELRQALQALDIEATAAELGIGELTLR 131 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 DII L +P RDPR E V M DL+PGM LEG V NV +FGAFVDIGV QDG Sbjct: 132 DIIDALCRPERDPRDELPKPLLRKDVLKMEDLKPGMELEGTVRNVVDFGAFVDIGVKQDG 191 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 LVHIS LS ++V P +V GD+VKV V VD+ + RI+L+M E+ Sbjct: 192 LVHISKLSKQYVRHPLDIVSVGDVVKVWVEHVDVAKGRISLSMVSPEE 239 >UniRef50_Q4CTN7 Putative uncharacterized protein (Fragment) n=3 Tax=Trypanosoma cruzi RepID=Q4CTN7_TRYCR Length = 1136 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 106/635 (16%), Positives = 201/635 (31%), Gaps = 95/635 (14%) Query: 153 ADTKAALDGARYILMERFAEDAALLAKVRDYLWKNA-HLVSTVVSGKEEEGAKFRDYFDH 211 +A L ++E+F++ L ++ D +V+ + + ++ +F Sbjct: 167 RSAEAVLFLFNQAIVEQFSKLPILRKRLFDVFCAEGDLIVTYKLCERRDDVYPLATFFVE 226 Query: 212 HEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKE--------------SYCEQI 257 H P H L + +G + L + + Sbjct: 227 H------PRH-YLDLLERERQGTVALYYVLSEELVCREMNLRQLYDRSPAADEWFLERER 279 Query: 258 IMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLET----------ELMGTVRERAEDEA 307 M+ L +RL + + + + + +E E E +D+A Sbjct: 280 AMELLLVRLIDGLIPKVKAELSQFAQQFVQTQAMERLGLICAQGPYEPTRLCLEVYDDDA 339 Query: 308 INVFARNLHDLLMAAPAGL---------RATMGLDPGLRTGVKVAVVDATGKLV-----A 353 + +++ A P R G ++ +D +G + Sbjct: 340 LT--WEPEWNVVEALPLKQLHVNGYKTLRRVCAAYRGDSGLTHISFIDESGSFIGSTRWE 397 Query: 354 TDTIYPHTGQAAK--AAMTVAALCEKHNVELVAIGN-GTAS----RETERFYLDVQKQFP 406 TG+AA + LC + + ++ +G AS R +F Sbjct: 398 NPAWSSETGRAADLMQQNQLEKLCARCSPSVIVVGASNMASLSLMRSLLKFLRGRVYAAF 457 Query: 407 KVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPK--- 463 V V A +YS++ A E P D R ++++AR +QDPL + + K Sbjct: 458 HVHIPIVWAPVEVARLYSSTTFAELEIPGADSLARTSLALARYVQDPLHAICVLFDKERT 517 Query: 464 ----SIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRVAGLTR 514 S+G Y + QL +L + V A GV + SV L +AG Sbjct: 518 ALRLSLGATVYVTGEQEDQLYARLCWEMSLWVTACGVWVEDCVTRPTSVASLQFLAGFGP 577 Query: 515 MMAQNIVAWRDENGQFQNRQ---QLLKVSRLGPKAFEQCAGFLRINHGDNP--------- 562 A+ + +R+ QL+K G LR + Sbjct: 578 SRARKLHQLLTLRRP-NSREECGQLIK-EYFGAYVSHNAISSLRFGPPSDASTDNGGSFS 635 Query: 563 ----LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDI 618 LD + + E Y + +A + + + E L+AS+ D + Sbjct: 636 RWHLLDQTLIPREWYSAAAFVASAALKGVPSRLVALVEFMRLEASEKRDRIDRHAHQRKM 695 Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM-ILEGAVTNVTNFGAFVDIGVHQDGL 677 I + + R P + + + G L +++ ++ G+ Sbjct: 696 ITAI-REARRPEWDSLLGEREVEFLQEEMITVGQSFLRRPYRRLSDR----ELMSFVTGI 750 Query: 678 VHI---SSLSNKF-VEDPHTVVKAGDIVKVKVLEV 708 V+ S+ S+ V+ V+ GD V V V Sbjct: 751 VYCTQSSAYSDTRSVDTRSLVICEGDYVMGTVQGV 785 >UniRef50_A4I9F1 Putative uncharacterized protein n=2 Tax=Leishmania RepID=A4I9F1_LEIIN Length = 1457 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 101/621 (16%), Positives = 183/621 (29%), Gaps = 110/621 (17%) Query: 55 NLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKT-ELE-DLYLPYKPKRR 112 L LE RRQ ++ S+ + + I +L +E D++L + + Sbjct: 366 RLVELNRLFLGLEYRRQRMISSLKDHPDARVQDQRTILNSLVFESAVEADIWLTFVDSLQ 425 Query: 113 TR-----GQIAIEAGLEPLADLL----------WSDPSHTPEVAAAQYVYADKGVADT-- 155 E GLE + + + ++ A+ Sbjct: 426 GLHGTDPYLRIRELGLEDAFEEFSITGLQYQENLRSNTAVTLCLSNAHMNLRDWAANVGR 485 Query: 156 --------KAALDGARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRD 207 + L L+ +F++ L + V D L+ + + + F Sbjct: 486 TLARPLDGEQILSLFTKALVSQFSKAPVLASMVFDVFCAEGDLIVSYKRSERSD-QIFSL 544 Query: 208 YFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN 267 E L + +++L D + I++ GL Sbjct: 545 ASMFTEHAQY-----FLELLEMERNDLVKLYFVLDQKLVYD---------ILNLEGLYQR 590 Query: 268 NAPADSWR--KGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG 325 D WR +S+ + L T++ + AE A+ L P Sbjct: 591 REDTDWWRARDEAMSFVVIRLLE-VLPTQVRAQLTANAEYVVSVSSAQRLSTFCSQGPYA 649 Query: 326 LRA----------------------------------TMGLDPGLRTGVKVAVVDATGKL 351 + G +D G + Sbjct: 650 ATRLQLSDFDGAARLWEPQWNVVEALPATKEAQDVSRVCAVYRGNSGVTAFTFIDEHGSV 709 Query: 352 VATDTIYPHT-------GQAAKAAMTVAALCEKHNVELVAIGNG-TAS----RETERFYL 399 + T +A A + L + +VAIG TA R E F Sbjct: 710 LGTTRWVDCAVSTVSGRERAVLQAAQLRKLFTQCRPTVVAIGASSTACLPLLRTLENFVR 769 Query: 400 DVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVK 459 + Q V V S YS + A E P + + +V++AR +QDPL L Sbjct: 770 EQVHQSTFVDVPVVWASVEVPRYYSVTTYARLELPQTENIVVTSVALARYVQDPLQVLCS 829 Query: 460 IDPKSIGVGQYQHDV-----SQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLLTRV 509 + Q + QL ++L + V AVG+ ++ + L V Sbjct: 830 LFEGEQTALQLCRTIRISASHDRQLYQRLAWEMSLWVAAVGLWVSDIVFRPNAAATLQFV 889 Query: 510 AGLTRMMAQNIVAWRDENGQFQNRQQLLK-VSRLGPKAFEQCAGFLRINHGDN------- 561 GL A+ + + Q+R+Q+ + + G + A LR+ + Sbjct: 890 PGLGPAKARALANAILHSDVPQSRRQVEQLLQPYGAAIVQNAAPVLRVRSPEQCDAELPW 949 Query: 562 -PLDASTVHPEAYPVVERILA 581 PLDA+ + + Y + + Sbjct: 950 HPLDATLIPSQWYTIACMVAK 970 >UniRef50_Q8SRG7 CHROMATIN STRUCTURE MODULATOR n=1 Tax=Encephalitozoon cuniculi RepID=Q8SRG7_ENCCU Length = 894 Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 99/683 (14%), Positives = 203/683 (29%), Gaps = 131/683 (19%) Query: 4 DSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFIARYRKEITGGLDDTQL---RNLETRL 60 D A ++ R E + + L+ G T+ F + G++D + + Sbjct: 94 DKVYEYAANNMRTRTESLKKIIELVGRGYTIHFAL-----LHSGIEDVGIEEGYEVVDIF 148 Query: 61 SYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELEDLYLPYKPKRRTRGQIAIE 120 RE + ++ + + D L + I Y YK + + Sbjct: 149 DEYREFVDLKEKMRRRYG-----NDKLLQDIEGIQGLK----WYSAYKK------HLDKD 193 Query: 121 AGLEPLADLLWSDPSHTPEVAAAQYVYADKGVADTKAALDGARYILMERFAEDAALLAKV 180 L D L S + A + ++ + + + L++R + + + Sbjct: 194 L---SLPDELLSAEDFCENIKAKKKIHEPRNSSFLSDFAN--EDKLIQRISLHPVFRSAL 248 Query: 181 RDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLN 240 + ++ K + + Sbjct: 249 YTVFRNHGIRSEKNGLDVRDDVMK-----------RDL------------------VDFY 279 Query: 241 ADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVR 300 E P Y E+II ++ + ++ +V + L ++ + Sbjct: 280 LSDISSEDPWNRYRERIIR--------SSAEKAAKEAIVPLVLKETDLREMKRRVFVEAV 331 Query: 301 ERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVDATGKLVATDTIYPH 360 +R + +I + G+ + +K V+ G LV T+ Sbjct: 332 DRIVNGSIGIKGD------------GTHVCGVTREKKY-LKAVTVNFEGDLVDYITV--- 375 Query: 361 TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAGA 420 + + EK + VA+ T S + K Sbjct: 376 ---KEEEKDELLRFIEKFDPCCVAVSGSTTS------IRYLMKDLSPWNP---------- 416 Query: 421 SVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLA 480 VY S LA + D + +IAR +Q P E + K I Q Q + + + Sbjct: 417 -VYVESRLAHTKAED---TYSFCCNIARIIQCPEIEYSDMLEKGIVYIQ-QQILPRNVMV 471 Query: 481 RKLDAVVEDCVNAVGVDL-----NTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ 535 + + ++ VGVD+ N LL+ + + ++ + + + Sbjct: 472 ETIRKGILTAISIVGVDVNYLLNNRRKEGLLSLIP-----TSSSLKSSLSDLRCVMKLED 526 Query: 536 LLKVSRLGPKAFEQCAGFLRINH-------GDNPLDASTVHPEAYPVVERILAATQQALK 588 L + ++ ++R++ G LDA+ VHP+ Y VV ++ Sbjct: 527 LKDLCE-SEVEYDNLVTYIRVHPRVLSRVSGSEILDATPVHPKNYDVVRKLCTDLCNEEG 585 Query: 589 DLMGNSSELRN--------LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 N ++ LK S + G P D+ K L R Sbjct: 586 VDEKNLDPVKKALSNAKELLKTSRPKILECGDPLTIDVYKTLVDGDRPIYSGLPDHLVFK 645 Query: 641 GVETMNDLQPGMILEGAVTNVTN 663 + ++ G ++EG ++ N Sbjct: 646 ELTGCDESLIGKVVEGRISKCGN 668 >UniRef50_A7AMH1 Putative uncharacterized protein n=1 Tax=Babesia bovis RepID=A7AMH1_BABBO Length = 1722 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 90/544 (16%), Positives = 187/544 (34%), Gaps = 81/544 (14%) Query: 184 LWKNAHLVSTVVS---------GKEEEGAKFRDYFDHHEPLST----VPSHRALAMFRGR 230 L K + T+ ++ +F D+++ ++ ++ + + A G Sbjct: 820 LEKEGVIKCTIHPLCANEVPPWQADDFSDRFADWYERYKVVTYSGNPMVNESYRA-RMGE 878 Query: 231 NEGVLQ---LSLNADPQFDEPPKESYCEQIIMDHLGLRLNN-APADSWRKGVVSWTWRIK 286 + +L+ + L + D+ + + +Q+ + + + + ++ ++ ++ Sbjct: 879 QKSILEKEEMLLKDSEERDKHWRRNLVDQLAIAYCPSNVPTYSIWRHIQRDILGRLLNVE 938 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGL---DPGLRTGVKVA 343 ++ E+ ++ A+ + R L L AP + + +PG V Sbjct: 939 LIPKFRMEIRDELQRNAQTWVLLHSQRMLQYKLDIAPGNRDNILTMAVEEPG--NVVHAV 996 Query: 344 VVDATGKLVATDTIYPHTGQAAKAA----------------MTVAALCEKHNVELVAIG- 386 VV+ G+ ++ G V L + V IG Sbjct: 997 VVNEFGEHKDYKRLHNLVGNQVSTRNCTPSNPLFKEIMVDIDLVIDLINTYRVSEALIGM 1056 Query: 387 NGTASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSI 446 TA T V + + + DL VS+ Sbjct: 1057 ANTAGMLLYHRLSVYMLPHINGTLHLKKVDIEVPRL-RRGMIKDGSYLDL------CVSM 1109 Query: 447 ARRLQDPLAELVKIDPKS-------IGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLN 499 R DP++E + + + + QH +SQ +L L+A + V GVD+N Sbjct: 1110 GRFYMDPVSETINLWNNKGNNLLLKLSLHPLQHLISQEKLQEYLEATLIQVVCDCGVDIN 1169 Query: 500 T-----ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQL----LKVSRLGPKAFEQC 550 L VAGL A V + + R QL + LG F C Sbjct: 1170 RIRTSKHMEATLQFVAGLGPRKA-IDVLRQLKIATIGTRGQLRSGNASLRGLGDLVFYNC 1228 Query: 551 AGF--LRINHGDNPLDASTVHP-EAYPVVERILAAT-------QQALKDLMGNSSELRNL 600 A F + N + LD + +HP E Y E++ + ++A++++ + +L +L Sbjct: 1229 ASFIRINQNEAMDILDTTRLHPAECYYTAEKLCTDSVDDELNGEEAIQEIFNHPDKLDDL 1288 Query: 601 KASDFTDEKFGV-------PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 ++ P + + +EL+ P RD R + + ++P ++ Sbjct: 1289 DLEAYSGLLLEKRNMPRMLPYLLFVKRELQAPFRDYRATLQDLKRDQEFCLALQIEPRLL 1348 Query: 654 LEGA 657 +G+ Sbjct: 1349 RKGS 1352 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Query: 27 LLDEGNTVPFIARYRKEITG-GLDDTQLRNLETRLSYLRELEERRQAILKSISEQG--KL 83 LL+E VPFI +++ + L D + + + +L+ I SI G L Sbjct: 347 LLNERWEVPFILYHKRHLICPPLSDEMVWRIYHLDAEWIKLKTLSDTIKDSIDRIGYELL 406 Query: 84 TDDLAKAINATLSKTELEDL 103 +D+ S +L D+ Sbjct: 407 PNDVLYYSLHFNSMDDLNDV 426 >UniRef50_Q586C8 Putative uncharacterized protein n=2 Tax=Trypanosoma brucei RepID=Q586C8_9TRYP Length = 1543 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 98/664 (14%), Positives = 197/664 (29%), Gaps = 118/664 (17%) Query: 156 KAALDGARYILMERFAEDAALLAKVRDYLWKNA-HLVSTVVSGKEEEGAKFRDYFDHHEP 214 + L + E+F L ++ + +VS S K ++ +F H Sbjct: 514 ETVLWLFNQAITEQFTRLPVLRTRLFNVFCAEGDLIVSYKNSKKADDVYPLASFFVEH-- 571 Query: 215 LSTVPSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLN-NAPADS 273 S L + +G + L + + + + + ++ + Sbjct: 572 -----SRHYLDLLERERQGTIDLFYVLNDELVRGVAKFGQLYDPSFNNAVGISQRDEWLT 626 Query: 274 WRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAG-------- 325 R+ V+ V + + + A A A L P Sbjct: 627 SRRDVMELVLIRLVEGLTPK-VKAELSQFASRCAHTQCAERFGLLCAQGPYERTWLNIAA 685 Query: 326 -----------------------------------LRATMGLDPGLRTGVKVAVVDATGK 350 + G + +D G Sbjct: 686 YDDEALVWEPEWNVVEALPRRPAGLPVTSSYGCKPPARVCAVYGGEGGLAHICFIDENGL 745 Query: 351 LVATDTIYPHTGQAAKAAMT-------VAALCEKHNVELVAIGNG-TAS----RETERFY 398 LV T + + ++ N +V +G TAS R +RF Sbjct: 746 LVGTMRWVSCALTSESGRTADLLQNIQLENQFDRCNPGVVVVGASSTASLGLMRSMQRFL 805 Query: 399 LDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV 458 + + + V A +YS + A E PD D R A+++AR +QDPL + Sbjct: 806 RERAEANLRAHVPIVWAPVEVARLYSGTTYADSEMPDADSLSRTALALARYVQDPLGAIS 865 Query: 459 KID-----PKSIGVGQYQH--DVSQTQLARKLDAVVEDCVNAVGVDLNTA-----SVPLL 506 + + +G+ + + QL +L + V A GV ++ S LL Sbjct: 866 VLFDSRRTALRLSLGRVANITSEQEEQLYLRLCWEMSLWVTACGVWVDHCLTRSNSTALL 925 Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQ-QLLKVSRLGPKAFEQCAGFLRINHGDNP--- 562 ++G + A+ + + + + + G + LRI + Sbjct: 926 QFISGFGPVRARKLQQLLFLRRPINKDECEKMITNAFGMHVAQNAVSSLRIGPPMDSDRE 985 Query: 563 ----------------LDASTVHPEAYPVVERILAATQQALK--DLMGNSSELRNLKASD 604 LD + + Y I A + ++ + L +D Sbjct: 986 VGTGEDGSLKSGRWTLLDQTLLPVAWYSTAACIACAALKRATSPHVITIRRTVAALLVAD 1045 Query: 605 F----TDEKFGVPTVTDIIKELEKPGR-DPRPEFKTAQFADGVETMNDLQP---GMILEG 656 F DE+ G ++E+ + R + R + VE + D + Sbjct: 1046 FMQRPADERRGCMDRDVRVQEITRTMRLEVRSTWSGLLGRREVEFVQDEMIASGQSFMRR 1105 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISS----LSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 ++N ++ + G+ + ++ ++ VE +V G+ + V V R Sbjct: 1106 PYRRISNR----ELMTYVTGITYCTNQDAPFLHRGVETMSLIVCEGEYIAGVVQSV---R 1158 Query: 713 KRIA 716 ++A Sbjct: 1159 GKLA 1162 >UniRef50_UPI00015551B3 PREDICTED: hypothetical protein, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015551B3 Length = 613 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 10/190 (5%) Query: 228 RGRNEGVLQLSLNAD-PQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIK 286 R +LQ S+ + P M + L DS V +++ Sbjct: 429 RPELLKILQDSVEDSYKRLIHPLLCREFRWRPMGYTRPELLKILQDS-----VEDSYKRL 483 Query: 287 VLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDPGLRTGVKVAVVD 346 + L E + AE E+I +F RNL LL+ +P R MG+DPG + G K+A++ Sbjct: 484 IHPLLCREFRSKLTSEAEKESIMMFGRNLRQLLLTSPVPGRTLMGVDPGYKHGCKLAIIS 543 Query: 347 ATGKLVATDTIYPH--TGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQ-- 402 T +++ TD Y H G A+ + + L + V IGNGTA RETE ++ D+ Sbjct: 544 PTSQILHTDVAYLHSRQGNVARESEKIKRLLLNFSCSTVVIGNGTACRETEAYFADLIMR 603 Query: 403 KQFPKVTAQK 412 K F + Sbjct: 604 KYFAPLDVVY 613 >UniRef50_C1ZHL8 Ribosomal protein S1 n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZHL8_PLALI Length = 557 Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 96/280 (34%), Gaps = 24/280 (8%) Query: 485 AVVEDCVNAVGVDLNT--------ASVPLLTRVAGLTRMMAQNI-----VAWRDENGQFQ 531 VN G+++ AS L V+ + + + + Sbjct: 266 EAYVTAVNKGGLEVAVGQIRAFLPASQVELGFVSSMDAFVGKKFPVEVTEVNPAKRNLVV 325 Query: 532 NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 +R+ +L R E A F + + Y + M Sbjct: 326 SRKAILIAERK-----EAAASFWDKVEVGQKFTGTIKTIKDYGAFVDLGGVDGFLHVGEM 380 Query: 592 GNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 + + TD TV ++ L++ + + G Sbjct: 381 SWT------RIKHPTDCVREQQTVDVVVLSLDREKQKIGLGMRQLVQNPWNSAPETYAVG 434 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 + G VT +T+FGAF+++ +G++HIS L K V+ V+K G V +VLE+ + Sbjct: 435 KTVTGKVTRITDFGAFIELEPGVEGMIHISELDYKRVKRVADVLKEGQQVDAQVLEIQPE 494 Query: 712 RKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGR 751 R+RI+L+++ + E A + P + + R Sbjct: 495 RQRISLSVKALKPKPEVVAPPKDEDLAPGKGQQYERKRKE 534 >UniRef50_D1B5G8 RNA binding S1 domain protein n=3 Tax=Synergistaceae RepID=D1B5G8_THEAS Length = 504 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 85/233 (36%), Gaps = 11/233 (4%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + R + +R+ +L + F H + L+ ++ V Sbjct: 174 KLVEKDRRKRRLVLSRRSILDEEMASLR-----EEFYANVHEGDILEGEVSSITSFGVFV 228 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + A + + D+ V + +++ K AQ Sbjct: 229 NLGAMEGLVHITELSWQRGAKAKDLVQKGDK------VKVKVIGIDRENNRVSLSLKQAQ 282 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 V + G +G VTN+ +FGAFV+I +GL+HI LS V+ P V+K Sbjct: 283 EDPWVGVTSRWTVGQRTKGVVTNLADFGAFVEIEPGVEGLIHIGDLSWSRVKHPKEVLKK 342 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 G V+V +LEVD R+RI L ++ P + + ++ G Sbjct: 343 GQEVEVVILEVDGDRRRIGLGLKQLNDPWANVSEKYSKDQVVTVKVVRLADFG 395 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 47/252 (18%), Positives = 89/252 (35%), Gaps = 19/252 (7%) Query: 483 LDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQ---------NR 533 L+ V + GV +N ++ L + L+ + + + N Sbjct: 214 LEGEVSSITSF-GVFVNLGAMEGLVHITELSWQRGAKAKDLVQKGDKVKVKVIGIDRENN 272 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 + L + + + + + + I + + + Sbjct: 273 RVSLSLKQAQEDPWVGVTSRWTVGQRT---KGVVTNLADFGAFVEIEPGVE-----GLIH 324 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 +L + + V +I E++ R K + Sbjct: 325 IGDLSWSRVKHPKEVLKKGQEVEVVILEVDGDRRRIGLGLKQLN-DPWANVSEKYSKDQV 383 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 + V + +FGAFV+I +GL+HIS LS + VE P V++ G V+ K+LEV+ K Sbjct: 384 VTVKVVRLADFGAFVEIEDGVEGLIHISQLSRQRVEKPSDVLREGQEVQAKILEVNPSEK 443 Query: 714 RIALTMRLDEQP 725 RI L++R E+P Sbjct: 444 RIRLSLRALEEP 455 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 6/209 (2%) Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI-LAATQQALKDLMGNSS 595 + S + E + N S V E L + + Sbjct: 7 MNNSGVSEPEPETMESIMEQIDSVNIHRGSVVEGTVVDAREDGWLVDVGYKCEGFLPRRE 66 Query: 596 ELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD-GVETMNDLQPGMIL 654 + + G + + +F + L ++ Sbjct: 67 WSHRAIVEKVGEPQVGDRIRVQVTNVGQGEEAQLNLSRWRCEFDERWNALEEKLAQSDVI 126 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 E G VD +G + IS L+ +P + G VK++E D +++ Sbjct: 127 EVEGIRKVKGGLIVDC-CGLEGFIPISHLAEEGRGINPANL--VGKTFPVKLVEKDRRKR 183 Query: 714 RIALTMRLDEQPGETNARRGGGNERPQNN 742 R+ L+ R + R + + Sbjct: 184 RLVLSRRSILDEEMASLREEFYANVHEGD 212 >UniRef50_C0GUF0 RNA binding S1 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GUF0_9DELT Length = 476 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 60/236 (25%), Positives = 95/236 (40%), Gaps = 11/236 (4%) Query: 519 NIVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 +V+ + NG+ +R+ L + E F R + L + E Y V Sbjct: 159 FLVSRVEANGRNIVVSRRALKDKEQ-----AESLHEFSRNYKPGDVLQGTVTRVEPYGVF 213 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 + + + + S R+L + V I+E +K K A Sbjct: 214 VEVAPGLEGLV--HISEMSWSRSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGLSMKQA 271 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVV 695 Q + +PG ++EG VT V FGAFV+I +GLVH+S +S K V P V Sbjct: 272 QADPWESITENFEPGSVVEGVVTRVAPFGAFVEISPGLEGLVHVSEMSYLKRVSKPEEEV 331 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 + G V+VKV +D +RI+L+MR + P E + R + + G Sbjct: 332 QPGQKVRVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKGTLVEGKMEKQEDFG 387 Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats. Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 8/154 (5%) Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND----LQPGMILEGAVTN 660 + ++T ++ +E GR+ + + + E++++ +PG +L+G VT Sbjct: 147 EDSQSLVGESMTFLVSRVEANGRNIVVSRRALKDKEQAESLHEFSRNYKPGDVLQGTVTR 206 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIAL 717 V +G FV++ +GLVHIS +S P +V GD V V +L ++ + K RI L Sbjct: 207 VEPYGVFVEVAPGLEGLVHISEMSWSRSLAPEEIVSVGDTVSVHLLGIEEKDKGQVRIGL 266 Query: 718 TMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 +M+ + P E+ + P G Sbjct: 267 SMKQAQADPWESITENFEPGSVVEGVVTRVAPFG 300 Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 59/193 (30%), Gaps = 11/193 (5%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 + ++ + I + L+ S + S +E Sbjct: 276 WESITENFEPGSVVEGVVTRVAPFGAFVEISPGL----EGLVHVSEMSYLKRVSKPEEEV 331 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V +K ++ R + AQ + G ++EG + +FG V Sbjct: 332 QPGQKVRVKVKGIDSLERRISLSMRDAQGDPWEGVSTRYEKGTLVEGKMEKQEDFGMLVA 391 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + GLV S L K GD V V V VD +RI+L QP ++ Sbjct: 392 LEPGVVGLVPRSILHQNQDSSLTNK-KPGDRVNVAVESVDEANRRISL------QPADSV 444 Query: 730 ARRGGGNERPQNN 742 + P + Sbjct: 445 QSEEWQSYAPARD 457 >UniRef50_Q67NT8 30S ribosomal protein S1 n=1 Tax=Symbiobacterium thermophilum RepID=Q67NT8_SYMTH Length = 441 Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats. Identities = 53/247 (21%), Positives = 94/247 (38%), Gaps = 14/247 (5%) Query: 481 RKLDAVVEDCVNAVGVDLNTASVPLLT-------RVAGLTRMMAQNIVAWRDENGQFQNR 533 ++A V + V G+ ++ L VA L++ + Q I E ++ R Sbjct: 146 EVIEAEVTEAV-KGGLVVDLGLRAFLPASQVDRGYVADLSKFVGQKIRVKIIELDPYKGR 204 Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 L + L + F + L+ + + + M Sbjct: 205 VILSRKQVLEAERTAARERFWSTVQEGDVLEGTVKSITDFGAFIDLGGVDGLLHISEMSY 264 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + + + + L++ K G I Sbjct: 265 G------RIKHPSQVVSEGERIKVKVLRLDREKGKVSLGLKQVLPDPWDSVEEKYPEGAI 318 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 +EG V +T FGAFV++ DGL+HIS ++++ + +P VV GD+VKVKV+ VD Q + Sbjct: 319 VEGTVARLTTFGAFVELEPGVDGLIHISQMADRRINNPGEVVSIGDVVKVKVINVDAQNR 378 Query: 714 RIALTMR 720 RI+L++R Sbjct: 379 RISLSLR 385 Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 62/182 (34%), Gaps = 10/182 (5%) Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA-DGVETMNDLQPGMILEG 656 R L+++ K G ++ K R + A E + G ++E Sbjct: 91 RPLRSAHDAGLKVGDEVQVVVLSVDTKGEGGLRISKRRADEQLAWAEVERKFEAGEVIEA 150 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIA 716 VT G VD+ + S + +V D G ++VK++E+D + R+ Sbjct: 151 EVTEAVKGGLVVDL--GLRAFLPASQVDRGYVADLSKF--VGQKIRVKIIELDPYKGRVI 206 Query: 717 LTMRLDEQPGETNARR-----GGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGK 771 L+ + + T AR + + + G G ++ + G+ Sbjct: 207 LSRKQVLEAERTAARERFWSTVQEGDVLEGTVKSITDFGAFIDLGGVDGLLHISEMSYGR 266 Query: 772 KR 773 + Sbjct: 267 IK 268 Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 5/138 (3%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMND-LQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 I++E + GR + A+ +E +PG I+ G V V++ VD+G +G Sbjct: 22 IVQEFDTQGRKNVETMEEAEARAELEAALRVPKPGDIVRGQVVRVSDDSIMVDVGYKSEG 81 Query: 677 LVHISSLSNKFVEDPHTV-VKAGDIVKVKVLEVDLQRK---RIALTMRLDEQPGETNARR 732 ++ ++ LS++ + H +K GD V+V VL VD + + RI+ ++ R+ Sbjct: 82 IIPLNELSHRPLRSAHDAGLKVGDEVQVVVLSVDTKGEGGLRISKRRADEQLAWAEVERK 141 Query: 733 GGGNERPQNNRPAAKPRG 750 E + A G Sbjct: 142 FEAGEVIEAEVTEAVKGG 159 >UniRef50_A3ZTD7 30S ribosomal protein S1 n=2 Tax=Bacteria RepID=A3ZTD7_9PLAN Length = 536 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 70/365 (19%), Positives = 128/365 (35%), Gaps = 30/365 (8%) Query: 430 AQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGV----GQYQHDVSQ--------- 476 + F DL +G VS+ R P K++ I G Y+ V Sbjct: 179 EEVFIDLPGQNQGFVSL-RSFVAPPEIGAKLEVVIIKYDREQGLYEALVPGSSVSVVDWG 237 Query: 477 TQLARKLDAVVEDCVNAVGVDLNT--------ASVPLLTRVAGLTRMMAQNIVAWRDENG 528 L V D VN G++ AS V + + Q + E Sbjct: 238 DLTEGILVDAVVDGVNKGGLECAVGQARGFIPASQIAPHHVTNMEDYLGQKLQCLVTEAN 297 Query: 529 QFQNRQQLLKVSRLGPKAFEQCAG-FLRINHGDNPLDASTVHPEAYPVVERILAATQQAL 587 + R +L + KA E + D + + + I Sbjct: 298 P-ERRNLVLSARAVAEKAKEDSRKETMVTLQVGQMRDGTVTRLQDFGAFVDIGGVDGLVH 356 Query: 588 KDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 + + +D V + +++ + + + Sbjct: 357 VSQISWD------RVKHPSDALSEGQAVRVKVTKIDPETGKIGLSIRDTLENPWQKVAEE 410 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 G I+ G VT + +FGAFV+I +GLVH+S +S+ V +V+KAG+ V+VKV+ Sbjct: 411 FSVGAIINGKVTKIMDFGAFVEIAPGIEGLVHVSEVSHTRVSRIESVLKAGEKVEVKVVN 470 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAA 767 +D +++RI L+++ + + +E P++ A K + ++ G + + Sbjct: 471 IDKEKRRIGLSIKALSPAPASKSGGKKKDEEPEDLDRALKVKPTASELKGGIVNEQSQGS 530 Query: 768 AMGKK 772 G K Sbjct: 531 KFGLK 535 >UniRef50_D1Y3S9 30S ribosomal protein S1 n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y3S9_9BACT Length = 518 Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 86/220 (39%), Gaps = 11/220 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + + + +R+ LL + F + + LD + + + Sbjct: 172 RLLEMDKRKRRLVLSRRSLLDEDLSAKR-----EKFYSEVNVGDVLDGTVSSVTTFGLFV 226 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + SE+ ++S + V + ++K + AQ Sbjct: 227 NVGPLDG------LVHVSEVSWQRSSKSRETYKKGDAVKVKVIGIDKENNKISLSIRQAQ 280 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 M Q +G VTNVT+FGAFV++ +GL+HI LS ++ P V+ Sbjct: 281 GNPWDTVMERWQKDQQTKGVVTNVTDFGAFVEVEPGIEGLIHIGDLSWSRIKHPREVLHK 340 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 G V+ VLE+D ++KR++L + P + R + Sbjct: 341 GQEVETIVLEIDPEKKRMSLGYKQLHDPWKGIEERYTKGQ 380 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 2/169 (1%) Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + + +L + + V I+ E++ + +K Sbjct: 320 LIHIGDLSWSRIKHPREVLHKGQEVETIVLEIDPEKKRMSLGYKQLH-DPWKGIEERYTK 378 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G + V + +FGAFV+I +GL+HIS LS VE P V++ G V +VLEV+ Sbjct: 379 GQDITVKVVRLADFGAFVEIEKGVEGLIHISQLSTHRVEKPGDVLQEGQEVTARVLEVNP 438 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNS 759 +RI L++ E GE A RG + P + ++ Sbjct: 439 AERRIRLSISAIE-AGEKAAERGKNSPAQGEKAPRHEGLASRSERNSKP 486 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 55/166 (33%), Gaps = 5/166 (3%) Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 L + + ++ D + G + + + +F Sbjct: 49 LVDVGYKCEGFLPEREWTHHILVDDKPAPEIGDKIEVQVTSKRDGEEAQLLVSRWRCEFD 108 Query: 640 D-GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKA 697 E + ++ I+ G V+ + +G + IS L+ +P Sbjct: 109 RRWAELESKVKANDIITVKGIRKVKGGLMVNC-FNLEGFIPISHLAEEGRGVNPGRF--E 165 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 G+ +V++LE+D +++R+ L+ R + R +E + Sbjct: 166 GEEFQVRLLEMDKRKRRLVLSRRSLLDEDLSAKREKFYSEVNVGDV 211 Score = 42.0 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 50/123 (40%), Gaps = 4/123 (3%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 + +E++ + + + A ++ G ++EG V T+ G VD+G +G Sbjct: 1 MSEEVKNQVEEESMDMASLM-AQYDAASEEIARGKVIEGTVVEKTDGGWLVDVGYKCEGF 59 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEV-DLQRKRIALT--MRLDEQPGETNARRGG 734 + ++ + D + GD ++V+V D + ++ ++ ++ + Sbjct: 60 LPEREWTHHILVDDKPAPEIGDKIEVQVTSKRDGEEAQLLVSRWRCEFDRRWAELESKVK 119 Query: 735 GNE 737 N+ Sbjct: 120 AND 122 >UniRef50_P50889 40S ribosomal protein S1 n=37 Tax=Bacilli RepID=RS1_LEULA Length = 429 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 12/269 (4%) Query: 496 VDLNT------ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ 549 VD+N AS+ V+ L + ++I A E R L + + + Q Sbjct: 161 VDVNGVRGFVPASMVAERFVSDLNQFKNKDIKAQVIEIDPANARLILSRKAVAAQELAAQ 220 Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 A ++ + + + + + + + D Sbjct: 221 LAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVDGLVHVSEISHD------RVKNPADVL 274 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V I L+ K Q E + + G +LEG V V +FGAFV+ Sbjct: 275 TKGDKVDVKILALDTEKGRISLSIKATQRGPWDEAADQIAAGSVLEGTVKRVKDFGAFVE 334 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 I +GLVH+S +SNK +E+P V+K+GD V+VKVL++ +RI+L+M+ E+ E Sbjct: 335 ILPGIEGLVHVSQISNKRIENPSEVLKSGDKVQVKVLDIKPAEERISLSMKALEEKPERE 394 Query: 730 ARRGGGNERPQNNRPAAKPRGREAQPAGN 758 RRG + + A K + A G+ Sbjct: 395 DRRGNDGSASRADIAAYKQQDDSAATLGD 423 Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 6/141 (4%) Query: 583 TQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL--EKPGRDPRPEFKTAQFAD 640 + ++ + + + K G +I + +K G K Sbjct: 75 LSTGEEGVVPAREYSDDRNINLADELKIGDTIEAVVISNVTSDKEGVAYLLSKKRLDARK 134 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 E ++ G ++ V N G VD+ G V S ++ +FV D + Sbjct: 135 AWENLS-FAEGDTVDAKVINAVRGGLIVDV-NGVRGFVPASMVAERFVSDLNQF--KNKD 190 Query: 701 VKVKVLEVDLQRKRIALTMRL 721 +K +V+E+D R+ L+ + Sbjct: 191 IKAQVIEIDPANARLILSRKA 211 Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Query: 646 NDLQPGMILEGAVTNV-TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + ++ G ++ G + + + A V + ++G+V S+ + +K GD ++ Sbjct: 50 DQIKVGDVVTGELLAIDNDNQAVVGLSTGEEGVVPAREYSDDRNINLADELKIGDTIEAV 109 Query: 705 VLE 707 V+ Sbjct: 110 VIS 112 >UniRef50_A8ZTZ3 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZTZ3_DESOH Length = 492 Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats. Identities = 54/246 (21%), Positives = 88/246 (35%), Gaps = 9/246 (3%) Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS 566 V + + + I A NR++LL+ + EQ FL + +D Sbjct: 162 EFVGAVFPFLIERIEA--RGKNLVVNRRRLLEQEQ-----AEQREKFLAQARPGDIVDGR 214 Query: 567 TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 V Y + + + + S + + E V + + G Sbjct: 215 VVRIMPYGAFMELQPGVEGMVHISELSWSRVGDPSEVTAVGEVLPVRILAIDRTGSKTGG 274 Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN- 685 K A + G +EG VT +FGAFV++ +GLVHIS +S+ Sbjct: 275 LKISLSAKQAAVDPWKTVGEKYKEGDKIEGKVTRCADFGAFVEVEPGIEGLVHISEMSHT 334 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRP 744 + V V + GD V V V VD +R++L+++ E P T A R + Sbjct: 335 RRVVKAEDVARPGDRVAVMVTSVDPVNRRLSLSIKAAEGDPWLTVANRMAVGQTVSGTVE 394 Query: 745 AAKPRG 750 G Sbjct: 395 RVLDFG 400 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 7/187 (3%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + ++ + + + + + + + D Sbjct: 294 EKYKEGDKIEGKVTRCADFGAFVEVEPGIEGLVHISEMSHTR----RVVKAEDVARPGDR 349 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++ ++ R K A+ + N + G + G V V +FG F+ + Sbjct: 350 VAVMVTSVDPVNRRLSLSIKAAEGDPWLTVANRMAVGQTVSGTVERVLDFGCFISLAPGV 409 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 GL+ SS+ +KA D V VK+ ++L K+I+L + + Sbjct: 410 TGLMPRSSMERAADPKAMEKLKADDPVTVKIETINLADKKISL---APADAEGASDWKQY 466 Query: 735 GNERPQN 741 P+ Sbjct: 467 TGNEPRQ 473 >UniRef50_B8DPH9 RNA binding S1 domain protein n=4 Tax=Desulfovibrio vulgaris RepID=B8DPH9_DESVM Length = 564 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 71/389 (18%), Positives = 140/389 (35%), Gaps = 37/389 (9%) Query: 376 EKHNVELVAIGNGT----ASRETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQ 431 E+ +VAIG T + + + + + + +Y S A + Sbjct: 69 ERVKATVVAIGEDTVFVATGAKVDGLVDRKELEDAEGNLPVAVGDVL--ELYVVSANANE 126 Query: 432 EFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCV 491 L ++ G V +A+ ++D L + I+ K G + + L R+ Sbjct: 127 --IKLSRAMGGQVGLAQ-MEDALNAGIPIEGK--VTGPCKGGFNVEVLKRRAFCPASQMD 181 Query: 492 NAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQ 549 G + ++ + ++ ++NG+ +R+ LL+ + E Sbjct: 182 LRPGAEPDSFTGQTFQF-----------LITRLEQNGRNIVVSRRMLLEREQ-----AES 225 Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 + + + L+ + + I + + + S ++ + +K Sbjct: 226 LSALMENVKEGDVLEGTVARLAPFGAFVEIAPGLEGMVHVSELSWSRVQQADEAVSVGDK 285 Query: 610 FGVPTVTDIIKELEKPGRDPRP------EFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 V + E K G+D R + + + L IL G VT + Sbjct: 286 VRVKVLGIAGAEEGKGGKDSRKGPRISLSIRQVSGDPWQDVADRLDADQILTGKVTRLAP 345 Query: 664 FGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 FGAF+++ +GLVH+S +S + + P V G+ V V++ E+D RKR++L++R Sbjct: 346 FGAFIEVLPGVEGLVHLSEMSWTRRINKPEEAVTPGETVSVRIKELDPARKRLSLSLRDA 405 Query: 723 E-QPGETNARRGGGNERPQNNRPAAKPRG 750 E P T R P G Sbjct: 406 EGDPWSTVEERFPAGSTVTGTVEKRAPFG 434 Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%) Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 D L + +L + L+ S + + + TV+ Sbjct: 330 LDADQILTGKVTRLAPFGAFIEVLPGV----EGLVHLSEMSWTRRINKPEEAVTPGETVS 385 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 IKEL+ + + A+ G + G V FG FV++ G Sbjct: 386 VRIKELDPARKRLSLSLRDAEGDPWSTVEERFPAGSTVTGTVEKRAPFGLFVNLAPGVTG 445 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGN 736 L+ + + + + G V + V ++D++ +RI+L A Sbjct: 446 LLPNAVAATSPQSKTYAGLNPGAEVSLVVRDLDVKARRISL------------APADATG 493 Query: 737 ERPQNNRPAAKPRGREAQPA 756 E R A+P+ RE + Sbjct: 494 EDDDEWRKLAQPQKREPREG 513 >UniRef50_A6CB07 30S ribosomal protein S1 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CB07_9PLAN Length = 572 Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 98/279 (35%), Gaps = 30/279 (10%) Query: 485 AVVEDCVNAVGVDLNT--------ASVPLLTRVAGLTRMMAQNIVAWR-----DENGQFQ 531 V + N G+++N AS L V L + Q + + Sbjct: 284 ECVVNKSNKGGLEVNVGSLRGFLPASQVDLYFVGDLEPFVGQKLTVQITEVNPKKRNLVV 343 Query: 532 NRQQLLK--VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 +R++ L+ + + +E+ A + + + Y + Sbjct: 344 SRRKYLESEREEIQKELWEKLAI-------GQEHTGTVKNIKDYGAFVDLGGIDGFLHIG 396 Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 + + + D + I +++K K Q + Sbjct: 397 EISWN------RIKHPKDALSEHQQINVKILKIDKEKNRISLGMKQLQQDPWQSAEDRYA 450 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G + G VT T+FGAF+++ +GL+HIS L ++ V+ V+ G KVLEVD Sbjct: 451 TGSTISGKVTRTTDFGAFIELEPGLEGLIHISELDHRRVKRVTEVLTTGQETSAKVLEVD 510 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 RKRI+L+++ E A ++P R P Sbjct: 511 PNRKRISLSIKALIDKPE--AAEAPVEDQPSYERKRKGP 547 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV---HQDGLVHISSLSNKFVEDP 691 T G + G L+G V ++ N F+D+G G+V + K Sbjct: 183 TPATKSGAAAEEGVGEGDRLKGVVESINNDDVFIDLGAKAMGVPGIVPLRQFGEKTPV-- 240 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTM 719 G V VKV V I L++ Sbjct: 241 -----IGQEVDVKVTSVKEAEGLIQLSL 263 >UniRef50_B1C7U3 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7U3_9FIRM Length = 666 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 106/258 (41%), Gaps = 13/258 (5%) Query: 501 ASVPLLTRV----AGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQ--CAGF 553 AS + + + L + + IV + + +N +R+ LL+ + KA E+ Sbjct: 410 ASYYDVRFIKDFDSLLGKEIECRIVEFDKQKNKIIVSRKILLEEAYKERKAKEKELKEAA 469 Query: 554 LRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP 613 + ++A + + + + + S++ + + D Sbjct: 470 IAALEIGKEVEAPIKNITNFGMFIDLNGVDGFI------HISDIAWKRVGNINDLYKVGD 523 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 +V I+ EL+K + K E + + G ++ + N TNFGAF +I Sbjct: 524 SVKAIVTELDKDNYKVKLSVKDLTKEPWQEFIENYSVGQTVKATIKNTTNFGAFAEIIPD 583 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 +GL+HIS LS+ V + VK GD V VK+++++ +++++L+++ P + R Sbjct: 584 VEGLIHISQLSHDRVNNVEDAVKTGDEVNVKIIDINKDKRKVSLSIKETMDPPKRKIERN 643 Query: 734 GGNERPQNNRPAAKPRGR 751 + +N G Sbjct: 644 KLYHKEDSNVTLGDIFGD 661 Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 4/132 (3%) Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 I + + + F + E++ +++ G I+EG + V + ++IG D Sbjct: 264 QLIEEVINTMDNNMVDSF----EKNIEESIKEIREGDIVEGEIVMVDHNEVTMNIGYKSD 319 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 G+V + +ED + GD VKV V++++ ++L+ ++ G + + Sbjct: 320 GIVKKADFLYDLMEDLTSKAAKGDKVKVMVMKMNDGTGNVSLSKIKVDELGALDEAKEKF 379 Query: 736 NERPQNNRPAAK 747 + + K Sbjct: 380 DSKETVKAKITK 391 >UniRef50_C0GDV0 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GDV0_9FIRM Length = 678 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 66/342 (19%), Positives = 128/342 (37%), Gaps = 38/342 (11%) Query: 428 LAAQEFPDLDVSLRGAVSIARRLQDPLAELV---KIDPKSIGVGQYQHDVSQTQLARKLD 484 + P +V L G +A +++ V K+D + + + + + Q +L+ Sbjct: 328 KSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELE 387 Query: 485 AVVEDCVNAVG-----------VDLNTA-------SVPLLTRVAGL----TRMMAQNIVA 522 E+ G V+L S+ + + + ++ I+ Sbjct: 388 KAFEEGTILSGKVKEAVPAGLVVELGGGYDAFMPGSLVDVRYIPDFNEFQGQEISFKIIE 447 Query: 523 WRDEN-GQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILA 581 R E +R+Q+L+ A Q L + + + + Sbjct: 448 MRPEKEKLILSRKQVLEEE-----AAVQKDKVLAELEPGQIIKGTVKRLTNFGAFVDVGG 502 Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 + + SE+ + + + + + E+ + AQ Sbjct: 503 IDG------LVHISEISWHRIDNPGEVLSVGDEIEVKVIEVIPERERIGLSLRQAQPDPW 556 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 E G ++EG VT + +FGAFV++ +GLVHIS L+N V+ P VV+ GD+V Sbjct: 557 TEVGQKFSAGDVVEGKVTRIVDFGAFVELIPGVEGLVHISQLANYHVKQPSEVVQQGDVV 616 Query: 702 KVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 KVK+L+++ KR++L+MR +P + R+ Sbjct: 617 KVKILDINTDGKRVSLSMRDAAPRPKKEQTRQVQQQPEDTGT 658 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 3/140 (2%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVET-MNDLQPGMILEGAVTNVTNFGAFVDIGV 672 T+ ++I ++E E +TA ++ + + G ++ G V V++ VDIG Sbjct: 268 TIKEVIGKMENEKNTELQEEQTATEEVSLDQEIKEFSAGDVVTGTVVQVSDDEVLVDIGY 327 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--QPGETNA 730 +G++ + + + V++ G V+V V +VD Q RI L+ + E Q Sbjct: 328 KSEGVLPRQEVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELE 387 Query: 731 RRGGGNERPQNNRPAAKPRG 750 + A P G Sbjct: 388 KAFEEGTILSGKVKEAVPAG 407 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 62/187 (33%), Gaps = 8/187 (4%) Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 +L + + ++ + + + V + +L + ++ Sbjct: 283 ELQEEQTATEEV--SLDQEIKEFSAGDVVTGTVVQVSD----DEVLVDIGYKSEGVLPRQ 336 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 + + G + K ++ GR + E + G IL Sbjct: 337 EVILEGDQMLADVMENGQEVEVAVKKVDDQEGRIILSRKAIERKQKWAELEKAFEEGTIL 396 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G V G V++G D + S + +++ D + G + K++E+ ++++ Sbjct: 397 SGKVKEAVPAGLVVELGGGYDAFMPGSLVDVRYIPDFNEF--QGQEISFKIIEMRPEKEK 454 Query: 715 IALTMRL 721 + L+ + Sbjct: 455 LILSRKQ 461 >UniRef50_C1FAB9 Ribosomal protein S1 n=2 Tax=Bacteria RepID=C1FAB9_ACIC5 Length = 637 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 42/239 (17%), Positives = 89/239 (37%), Gaps = 13/239 (5%) Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY 573 + + I + +R+++L+ + + + L + L + + Y Sbjct: 234 PIEVRVIKLNKKRGNVVVSRKEILEEEQTAKR-----SETLEHLEEGSILTGTVKNLTDY 288 Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 + M + DE + + + ++ + F Sbjct: 289 GAFVDMGGIDGLLHITDMSWGRLTHPRDLVNVGDE------IQVKVLKFDRDKQRVSLGF 342 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPH 692 K ++ G + G V +VT++G+FV++ +GLVH+S ++ K ++ P Sbjct: 343 KQLTPDPWLDATERYPVGARVRGRVLSVTDYGSFVELEQGIEGLVHVSEMTWSKRMKHPS 402 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++K GD V+ VL V+ +RI+L M+ L + P ET + + G Sbjct: 403 KMLKPGDEVETVVLSVNPTDRRISLGMKQLQDNPWETLGDKYPTGATVEGRVRNLTDFG 461 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 6/188 (3%) Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 + Y + +Q ++ L+ S + + + V ++ + Sbjct: 365 GRVLSVTDYGSFVEL----EQGIEGLVHVSEMTWSKRMKHPSKMLKPGDEVETVVLSVNP 420 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 R K Q + G +EG V N+T+FGAF++I DGLVH+S+LS Sbjct: 421 TDRRISLGMKQLQDNPWETLGDKYPTGATVEGRVRNLTDFGAFIEIEDGIDGLVHVSNLS 480 Query: 685 N-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 K V+ P V+K G+ V+ VL V+ + +R++L ++ L ET + + Sbjct: 481 WTKRVKHPSEVLKKGEKVRAVVLGVEPENRRLSLGIKQLQPDVWETFFEQHRTGDVVHGK 540 Query: 743 RPAAKPRG 750 G Sbjct: 541 VLRTAQFG 548 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 5/165 (3%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DPRPEFKTAQFADGVETMNDLQP 650 ++ D G P +IK +K G + + Q A ET+ L+ Sbjct: 215 PGSQLEIRPVRNLDAYIGQPIEVRVIKLNKKRGNVVVSRKEILEEEQTAKRSETLEHLEE 274 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G IL G V N+T++GAFVD+G DGL+HI+ +S + P +V GD ++VKVL+ D Sbjct: 275 GSILTGTVKNLTDYGAFVDMG-GIDGLLHITDMSWGRLTHPRDLVNVGDEIQVKVLKFDR 333 Query: 711 QRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 ++R++L + L P R R + + G + Sbjct: 334 DKQRVSLGFKQLTPDPWLDATERYPVGARVRGRVLSVTDYGSFVE 378 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 29/225 (12%), Positives = 73/225 (32%), Gaps = 9/225 (4%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +R+ L + +L +E ++ + + I + + L Sbjct: 421 TDRRISLGMKQLQDNPWETLGDKYPTGAT---VEGRVRNLTDFGAFIEI----EDGIDGL 473 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + S+ + ++ V ++ +E R K Q + Sbjct: 474 VHVSNLSWTKRVKHPSEVLKKGEKVRAVVLGVEPENRRLSLGIKQLQPDVWETFFEQHRT 533 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G ++ G V FGAF++I +GL H+S +++ + ++ G K+++++ Sbjct: 534 GDVVHGKVLRTAQFGAFIEIAEGVEGLCHVSEATDQHGAPVN--LEQGQEYDFKIIKMNP 591 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP 755 K++ L++R + + + Sbjct: 592 DEKKVGLSLRAVGEEASRADVEAYKAPVSSSTTTLGDLMNWKRDR 636 >UniRef50_C7H149 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7H149_9FIRM Length = 703 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 58/314 (18%), Positives = 111/314 (35%), Gaps = 29/314 (9%) Query: 470 YQHDVSQTQLARKL---DAVVEDCVNAV--GVDLNTASVPLLTRVAGLTRMM-------- 516 + V +L L + V D V AV GV N V ++ L+ Sbjct: 393 MEASVHWAELEDALNNDETVKVDVVRAVKSGVIANYKEVSGFIPLSQLSERFIEDASEFV 452 Query: 517 -----AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 A+ I + + +QL K + ++ + + + ++ + Sbjct: 453 GQTMEAKVIRVDQKLGKAIFSPKQLQKEEKN-----KRLQELWKKLNVGDDIEGKVMRFT 507 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y I + K ++ T+ I L Sbjct: 508 EYGAFVDIGGVDGLLHISEISWG------KLKHPSEVLTVGDTINVKILSLNPEKGKISL 561 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 +K + + G +EG + + +GAF+++ DGL+HIS +S+ VE+ Sbjct: 562 GYKQNMPEPWSIIDDKYKAGDNVEGDIVQIKEYGAFLELEPGLDGLIHISEISHSRVENI 621 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGR 751 ++V+ GD V+ K+LE+D R+RI+L+++ P E + + A P+ Sbjct: 622 NSVLHIGDNVEAKILEIDKDRRRISLSIKALIDPPEQAPEAEEKAKEEEKPADEAAPQQE 681 Query: 752 EAQPAGNSAMMDAL 765 N + +A Sbjct: 682 VTIEEANEGVAEAE 695 >UniRef50_Q30ZT8 SSU ribosomal protein S1P n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q30ZT8_DESDG Length = 482 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 66/413 (15%), Positives = 133/413 (32%), Gaps = 48/413 (11%) Query: 360 HTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFYLDVQKQFPKVTAQKVIVSEAG 419 Q + + A L ++++ E G+ R E+ V + + G Sbjct: 2 TDDQNQTGSDSFADLLDQYSPE-----AGSPLRVGEKVKGSVV-AMDESSVFIA----TG 51 Query: 420 ASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELV-KIDPKSIGVGQYQHD-VSQT 477 + V + +E D + ++ AV D L V I + + + S Sbjct: 52 SKVDGVIDA--EELKDKEGNVTCAVG------DELDLYVVAITQGEVRLSRSAGSAGSAM 103 Query: 478 QLARKLDAVV-----EDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE------ 526 L + V G ++ V+ + +N + + Sbjct: 104 ALTEAFENGVPVEGKVTAQCKGGFNVEVMQRRAFCPVSQIDSRFVENPEEYLGQTFQFMI 163 Query: 527 -------NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI 579 +R+ LL+ + E +++ + + +D + + Sbjct: 164 TRCENNGRNVVVSRRVLLEAQQE-----ESRKEYMKTLNEGDVVDVCITRLTNFGAFAEL 218 Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 + + + +++ + + + E G K Sbjct: 219 APGVEGLIHISELGWARVQSADEAVTQGDTLRAKVLKI---ESTAKGLRIALSAKQVMED 275 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAG 698 + L G ++EG V T FGAFV++ +GLVHIS +S + + VV G Sbjct: 276 PWNTVADRLAAGTVVEGKVVRCTPFGAFVEVLPGIEGLVHISEMSWTRRILKAEDVVIPG 335 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 D V VK+ ++D ++RI+L++R E P + A + G Sbjct: 336 DTVSVKIKDIDSAKRRISLSLREAEGDPWDGAAEKFAPGTEVTGTVEKCAKFG 388 Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 92/278 (33%), Gaps = 25/278 (8%) Query: 503 VPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD-- 560 V L ++ L Q+ + + + ++ + G + + Sbjct: 222 VEGLIHISELGWARVQSADEAVTQGDTLRAKVLKIESTAKGLRIALSAKQVMEDPWNTVA 281 Query: 561 ------NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 ++ V + +L + L+ S + D T Sbjct: 282 DRLAAGTVVEGKVVRCTPFGAFVEVLPGI----EGLVHISEMSWTRRILKAEDVVIPGDT 337 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V+ IK+++ R + A+ PG + G V FG FV+I Sbjct: 338 VSVKIKDIDSAKRRISLSLREAEGDPWDGAAEKFAPGTEVTGTVEKCAKFGMFVNIAPGI 397 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 GL+ S +S K GD V + V+E++ +++ LT + +A R Sbjct: 398 TGLLPQSRISAAPKSGLAGC-KPGDTVTLAVMEINPAERKVTLTTK--------DAARQE 448 Query: 735 GNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKK 772 E P + R + + +Q G + AL A+ KK Sbjct: 449 DAEIPASYRV----QPKSSQGGGFGTLGQALKDALNKK 482 >UniRef50_Q1IHI9 SSU ribosomal protein S1P n=6 Tax=Bacteria RepID=Q1IHI9_ACIBL Length = 609 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 18/256 (7%) Query: 502 SVPLLTRVAGLTRMMAQ----NIVAWRDENGQFQ-NRQQLLKVSRLGPKAFEQCAGFLRI 556 S L V L + I+ + G +R+Q+L+ + K + L Sbjct: 186 SQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEEQNDKK-----SKTLEH 240 Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 + D L + + Y + M D+ + Sbjct: 241 LNEDAVLTGTVKNLTDYGAFVDLGGIDGLLHITDMSWGRLTHPRDLVQVGDQ------IQ 294 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 + + ++ + FK ++ G + G V +VT++GAF+++ +G Sbjct: 295 VKVLKFDRDKQRVSLGFKQLTPDPWLDASERYPIGARVHGRVISVTDYGAFIELEQGIEG 354 Query: 677 LVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGG 734 LVH+S ++ K ++ P +V GD V VL V+ Q +RI+L ++ E P E+ + Sbjct: 355 LVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNVNPQERRISLGLKQLETNPWESLHEKFP 414 Query: 735 GNERPQNNRPAAKPRG 750 + G Sbjct: 415 VGGVVEGKVRNLTDFG 430 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 6/190 (3%) Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL 622 + + Y + +Q ++ L+ S + + + V ++ + Sbjct: 332 VHGRVISVTDYGAFIEL----EQGIEGLVHVSEMTWSKRMKHPSKIVNVGDQVDAVVLNV 387 Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 R K + G ++EG V N+T+FGAF++I DGLVH+S+ Sbjct: 388 NPQERRISLGLKQLETNPWESLHEKFPVGGVVEGKVRNLTDFGAFIEIEDGIDGLVHVSN 447 Query: 683 LSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQ 740 LS K V+ P V+K GD VK VL ++ +R++L ++ L ET + Sbjct: 448 LSWTKRVKHPSEVLKKGDKVKAVVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGDIIH 507 Query: 741 NNRPAAKPRG 750 G Sbjct: 508 GKVLRLASFG 517 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 5/161 (3%) Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR---DPRPEFKTAQFADGVETMNDLQP 650 +L+ D G IIK +K G + + Q +T+ L Sbjct: 184 PGSQVDLRPVRNLDALKGHELEVRIIKLNKKRGNIVVSRKQILEEEQNDKKSKTLEHLNE 243 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 +L G V N+T++GAFVD+G DGL+HI+ +S + P +V+ GD ++VKVL+ D Sbjct: 244 DAVLTGTVKNLTDYGAFVDLG-GIDGLLHITDMSWGRLTHPRDLVQVGDQIQVKVLKFDR 302 Query: 711 QRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++R++L + L P + R R + G Sbjct: 303 DKQRVSLGFKQLTPDPWLDASERYPIGARVHGRVISVTDYG 343 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 31/203 (15%), Positives = 70/203 (34%), Gaps = 9/203 (4%) Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R+ L + +L +E ++ + + I + + L+ Sbjct: 392 RRISLGLKQLETNPWESLHE---KFPVGGVVEGKVRNLTDFGAFIEI----EDGIDGLVH 444 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 S+ + ++ V ++ +E R K Q + G Sbjct: 445 VSNLSWTKRVKHPSEVLKKGDKVKAVVLAIEPDNRRLSLGVKQLQPDVWETFFETHRVGD 504 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I+ G V + +FGAF++I +GL H S S++ ++ G K+++++ Sbjct: 505 IIHGKVLRLASFGAFIEIADGVEGLCHNSEASDEHGAPLK--LEPGQEFDFKIIKMNPDE 562 Query: 713 KRIALTMRLDEQPGETNARRGGG 735 K++ L++R + Sbjct: 563 KKVGLSLRAVGEEASRVEIENYK 585 >UniRef50_Q5BZL5 SJCHGC08220 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BZL5_SCHJA Length = 200 Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 42/203 (20%), Positives = 77/203 (37%), Gaps = 35/203 (17%) Query: 186 KNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTVPSHRALAMFRGRNEGVLQLSLNADPQF 245 +N+H + + + F++Y + P+S++ +H+ LA+ R GV+ + ++ PQ Sbjct: 1 QNSHSFLNSHNKSKNDLITFKNYLNFSRPVSSILAHQVLAINRASERGVITVKIHLSPQV 60 Query: 246 DEPPKESYCEQIIMDHLGLRLNNAPADSWRKGVVSWTWRIKVLMHLETELMGTVRERAED 305 C + +N + + W+ + HL + + A+D Sbjct: 61 QHN-----CATFVSQKYFSTVNRIHWN-FVMLAFDDAWKRLLDPHLVRSIRHKLTTSAQD 114 Query: 306 EAINVFARNLHDLLMAAPAGLRA-----------------------------TMGLDPGL 336 +++VF NL LLM AP +GLDPG Sbjct: 115 ASLDVFTENLRRLLMTAPLRNPFSLANDSIVNNDSDIGMISSASGAPGDRLPVVGLDPGW 174 Query: 337 RTGVKVAVVDATGKLVATDTIYP 359 G K A D G ++ T ++P Sbjct: 175 CNGCKWAACDPHGNVLGTGILWP 197 >UniRef50_A8YV34 30S ribosomal protein S1 n=29 Tax=Lactobacillus RepID=A8YV34_LACH4 Length = 403 Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 49/242 (20%), Positives = 90/242 (37%), Gaps = 6/242 (2%) Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS 566 V+ L + + + E +NR L + + E + ++ Sbjct: 145 RYVSDLKPYIGKTMKLKITEIDPNKNRLILSHKDLIEEEREEAFDKVASQLVVGDVIEGK 204 Query: 567 TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 + + + + SE+ +D V + ++ Sbjct: 205 VSRLTNFGAFIDVGGVDG------LVHISEISYKHVDKPSDVLKAGQDVKVKVIGIDDDR 258 Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 K + + + DL G + EG V ++TNFGAFV++ GLVH+S +SNK Sbjct: 259 HRISLSIKQTEPSPFEQATADLNEGDVFEGEVKSLTNFGAFVEVADGIQGLVHVSEISNK 318 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAA 746 V+ P V+K VKVKVL +D +RI+L+++ + ++ R +N Sbjct: 319 HVDKPSDVLKVDQTVKVKVLNIDPSDRRISLSIKAADSNASSSDNHSSRPRRSRNENSVN 378 Query: 747 KP 748 Sbjct: 379 NK 380 Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 7/188 (3%) Query: 547 FEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT 606 F ++ + +D + E + + + RN D Sbjct: 8 FLDALKQMQGVEVGDIVDVEVLDVED-GQINVGVVNAGVEGVITRREYTSDRNADLRDLV 66 Query: 607 DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN-DLQPGMILEGAVTNVTNFG 665 + +K + + + + + D + G +EG VT+ G Sbjct: 67 KPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRGG 126 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQ 724 VD+ G + S +SN++V D G +K+K+ E+D + R+ L+ + L E+ Sbjct: 127 LLVDV--GTRGFLPASLISNRYVSDLKPY--IGKTMKLKITEIDPNKNRLILSHKDLIEE 182 Query: 725 PGETNARR 732 E + Sbjct: 183 EREEAFDK 190 Score = 43.5 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 5/119 (4%) Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVV 695 QF D ++ M ++ G I++ V +V + V + +G++ ++ D +V Sbjct: 7 QFLDALKQMQGVEVGDIVDVEVLDVEDGQINVGVVNAGVEGVITRREYTSDRNADLRDLV 66 Query: 696 KAGDIVKVKVLEV---DLQRKRIALTM-RLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 K GD K VL D + ++ RL E+ ++ + RG Sbjct: 67 KPGDKFKALVLRRAGGDKENGEFFFSVTRLKEREAYDKLQKDFEEGNAIEGTVTSSVRG 125 >UniRef50_Q1IY12 RNA binding S1 n=9 Tax=Deinococci RepID=Q1IY12_DEIGD Length = 587 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 98/266 (36%), Gaps = 10/266 (3%) Query: 481 RKLDAVVEDCVNAV-GVDL-NTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLK 538 L+ V V V G+ AS RV L + + ++ E + +NR + Sbjct: 167 EVLEKVRGGLVAQVEGIRAFLPASQVDTRRVNDLDPYVGKPLMVKLIELNRKRNRVIISH 226 Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 + L + + + + V + V + + + Sbjct: 227 RAILEAQKAKAREQTIGKLVPGAQFEGEVVEITDFGVFVNLGGIDGLVHRSELTYG---- 282 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 + + D V + ++++ K+ + G + G V Sbjct: 283 --RFNHPRDVVKVGDKVQVQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKV 340 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 TN+TNFGAFV++ +GLVH+S +S K V P+ V+K GD V+ +L +D + +RI+L Sbjct: 341 TNLTNFGAFVELEPGLEGLVHVSEMSWTKRVRHPNEVLKEGDEVEAVILRIDPKERRISL 400 Query: 718 TMRL-DEQPGETNARRGGGNERPQNN 742 +R + P R + Sbjct: 401 GIRQTTDDPWSALPDRYPPGTPVKGK 426 Score = 118 bits (295), Expect = 9e-25, Method: Composition-based stats. Identities = 56/234 (23%), Positives = 91/234 (38%), Gaps = 10/234 (4%) Query: 515 MMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYP 574 AQ + D+ + R L + K R+ D + E Sbjct: 112 EQAQQMYKPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEAF-EVEVLE 170 Query: 575 VVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFK 634 V L A + ++ + + + + + D G P + + EL + + Sbjct: 171 KVRGGLVAQVEGIRAFL--PASQVDTRRVNDLDPYVGKP-LMVKLIELNRKRNRVIISHR 227 Query: 635 TAQFADGVETMNDL----QPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 A + PG EG V +T+FG FV++G DGLVH S L+ Sbjct: 228 AILEAQKAKAREQTIGKLVPGAQFEGEVVEITDFGVFVNLG-GIDGLVHRSELTYGRFNH 286 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNR 743 P VVK GD V+V+V++VD R+RI L+M+ L + P E + +R + Sbjct: 287 PRDVVKVGDKVQVQVIDVDEGRERINLSMKSLTQDPWEGAVEKYHIGQRVRGKV 340 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 70/194 (36%), Gaps = 4/194 (2%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 G + H + + + + + L+ S + + Sbjct: 323 WEGAVEKYHIGQRVRGKVTNLTNFGAFVELEPGL----EGLVHVSEMSWTKRVRHPNEVL 378 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V +I ++ R + + PG ++G +T +T+FG F++ Sbjct: 379 KEGDEVEAVILRIDPKERRISLGIRQTTDDPWSALPDRYPPGTPVKGKITGMTDFGVFME 438 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 I +GL+HIS L + V +P + K GD ++ +L +D +R +L+ R G Sbjct: 439 IEEGIEGLIHISELDTQRVNNPADLFKKGDEIEAVILNIDPVEQRASLSRRRALGGGGPV 498 Query: 730 ARRGGGNERPQNNR 743 +++R Sbjct: 499 RDYVSQGGGSRSDR 512 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 3/131 (2%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 R+ A + + G I++G V + G VD+G +G++ ++ Sbjct: 44 STDEREYPAMTMEDVLASEAQEPQTVSRGDIVDGTVVFIGQEGIAVDVGAKVEGIIPLNQ 103 Query: 683 LSNKFV--EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERP 739 + ++ V E + K GD ++ V+ VDL +I L+ + D+ G R + Sbjct: 104 IGDEPVTLEQAQQMYKPGDQIEAYVVRVDLANNQIVLSKKRADQDKGWRVLERMQEQDEA 163 Query: 740 QNNRPAAKPRG 750 K RG Sbjct: 164 FEVEVLEKVRG 174 >UniRef50_A8ZTA2 Ribosomal protein S1 n=22 Tax=Deltaproteobacteria RepID=A8ZTA2_DESOH Length = 604 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 78/235 (33%), Gaps = 13/235 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + R N +R+ LL+ + + A + ++ + Y V Sbjct: 173 KVLKYNRRRNNIVLSRRVLLEETLATKR-----AELMETLADGQVVEGIVKNITEYGVFV 227 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + ++ VT + + + K Sbjct: 228 DLGGIDGLLHITDISWG------RVRHPSELFTVGDNVTLKVLSFDLDKKKISLGMKQLT 281 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVK 696 G+ G V ++TN+G FV++ +GL+H+S +S + P VV Sbjct: 282 PDPWESAAEKYPVGVKTTGKVVSITNYGIFVELEEGVEGLIHVSEISWTRKIRHPSKVVN 341 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQNNRPAAKPRG 750 G+ V VL++ +RI+L M+ + P E + + + G Sbjct: 342 IGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGTVIEGRIKNITDFG 396 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 84/216 (38%), Gaps = 9/216 (4%) Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 L + +L P +E A + V Y + + ++ ++ L+ S Sbjct: 275 LGMKQLTPDPWESAAEKYPVGVKT---TGKVVSITNYGIFVEL----EEGVEGLIHVSEI 327 Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 K + V ++ +++ R K + G ++EG Sbjct: 328 SWTRKIRHPSKVVNIGEEVDAVVLDIQPGNRRISLGMKQVEPNPWEVISEKYPVGTVIEG 387 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 + N+T+FG F+ I DGLVHIS +S K ++ P + K GD+V+ VLE+D +R Sbjct: 388 RIKNITDFGLFIGIDDDIDGLVHISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKANERF 447 Query: 716 ALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 ++ ++ E P E+ R + G Sbjct: 448 SMGIKQLESDPWESVRDRYPIGTKVSGVVTNVTDFG 483 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 80/205 (39%), Gaps = 7/205 (3%) Query: 532 NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 NR+ L + ++ P +E + ++ + + + I L+ Sbjct: 357 NRRISLGMKQVEPNPWEVISE---KYPVGTVIEGRIKNITDFGLFIGIDDDI----DGLV 409 Query: 592 GNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 S + ++ V ++ E++K K + + G Sbjct: 410 HISDISWTKRIKHPSEIYKKGDLVRAVVLEIDKANERFSMGIKQLESDPWESVRDRYPIG 469 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 + G VTNVT+FG FV++ +GLVH+S +S + ++ P + G + +V+ V+ Sbjct: 470 TKVSGVVTNVTDFGIFVELEEGIEGLVHVSEVSTERIKTPVGQYEVGAELTARVMNVNAD 529 Query: 712 RKRIALTMRLDEQPGETNARRGGGN 736 ++I L+++ + + + + Sbjct: 530 ERKIGLSIKRLDVEDDKTLLKDYVD 554 Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 10/166 (6%) Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT-----VTD 617 D + VV + A + + + ++F +EK V V Sbjct: 30 YDHTFKQFTEGEVVVGKVIAVDKDYVLVDIGYKSEGQININEFKNEKGEVNVKIYDDVEV 89 Query: 618 IIKELEKPGRDPRPEFKTAQFAD-GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 +I+ ++ A+ + ++ G + N G VD+ Sbjct: 90 MIEFWDEEHEKLVLSKDKAEKDKIWETIKDTFDNDGVVSGVIINRVKGGFSVDV--GLQA 147 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 + S + + + + G KVL+ + +R I L+ R+ Sbjct: 148 FLPGSQADLRPIRNFDEM--VGQTYDFKVLKYNRRRNNIVLSRRVL 191 >UniRef50_B2A4N7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A4N7_NATTJ Length = 705 Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats. Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 16/252 (6%) Query: 501 ASVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS + V L++ + + I R N +++ +L+ + K + Sbjct: 441 ASHVDIHYVPDLSKYVGEELRLKPIELDRSRNKIVLSQKNILEQEQEEKK-----NKTME 495 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 + +D + + I + +S + E V Sbjct: 496 TITEGDIVDGTVKRLTDFGAFIDIGGIDGLCHISQISHS------RIDHPESELETGENV 549 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 + L+ K AQ M + G I++G V NFGAF++I + Sbjct: 550 KVKVLSLDPENERISLSIKEAQPDPFETFMKQYKSGDIVQGKVVRTVNFGAFIEITPGVE 609 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 GL HIS LS+ V VV GD V VK+L +D Q+K+++L+++ + + + Sbjct: 610 GLCHISQLSDDHVAKTQDVVNEGDQVTVKILSIDDQQKKVSLSIKEAQGKSKKEQEQEEF 669 Query: 736 NERPQNNRPAAK 747 + + Sbjct: 670 AKYQDSQEEEEG 681 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + L + E + ++ + L G +++G V VT A +D+G +G V Sbjct: 294 NENLNTNSDESTQESQDELMKATEDSADKLDRGQVVKGKVVKVTEDEAMIDVGYKFEGSV 353 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGN 736 ++ + K E ++ GD + VKV++VD + ++ L+ + ++ E + + Sbjct: 354 PVNEMPIKEGESLEDLLSEGDEIDVKVVKVDDEEGQLILSKKWADKDKQWEQLEQLMEND 413 Query: 737 ERPQNNRPAAKPRG 750 E + G Sbjct: 414 EEIKAQVTEEVKGG 427 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 54/178 (30%), Gaps = 10/178 (5%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 I + + D E G ++K ++ G+ + + Sbjct: 342 MIDVGYKFEGSVPVNEMPIKEGESLEDLLSE--GDEIDVKVVKVDDEEGQLILSKKWADK 399 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 + ++ ++ VT G VD+G G + S + +V D Sbjct: 400 DKQWEQLEQLMENDEEIKAQVTEEVKGGLVVDLGQ-LQGFIPASHVDIHYVPDLSKY--V 456 Query: 698 GDIVKVKVLEVDLQRKRIALTMR-----LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 G+ +++K +E+D R +I L+ + E+ + G Sbjct: 457 GEELRLKPIELDRSRNKIVLSQKNILEQEQEEKKNKTMETITEGDIVDGTVKRLTDFG 514 >UniRef50_C8WX93 RNA binding S1 domain protein n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WX93_ALIAD Length = 385 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 104/265 (39%), Gaps = 19/265 (7%) Query: 491 VNAVGVD-------LNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLG 543 V VGV ++ V L + G ++ A+ I +N +R+ +L+ Sbjct: 120 VADVGVRAFIPASLVDRHFVENLEQFKG-QKLRAKVIEVDPQKNKLILSRRAVLEEESE- 177 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 + + ++ + + + A + S + Sbjct: 178 ----ARARKLFEELKPGDVIEGTVQRLTDFGAFVDVGGADGLVHISELSFS------HVN 227 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 ++ V + ++ K A ++ QPG +++G V V + Sbjct: 228 HPSEVVREGDRVKVRVLRVDPEAGRISLSIKAALPEPWETYAHEFQPGDVVQGVVRRVVD 287 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 FGAFV++ +GLVH+S +SN+ V+ P V++ G V V+VL VD +RKRI+L+MR Sbjct: 288 FGAFVELRPGLEGLVHVSQISNEHVDKPSDVLQPGQEVTVRVLSVDPERKRISLSMRDSS 347 Query: 724 QPGETNARRGGGNERPQNNRPAAKP 748 QP R G + RP R Sbjct: 348 QPRGGQGRGGRRDRRPTEPRNEGAS 372 Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 + T ++ G ++ G VT V + G V + +G + LS P VV G Sbjct: 6 REMLTDAAVREGDVVTGEVTAVDDHGVTVALPHGYEGHISPQELSAVPGTHPSDVVSVGS 65 Query: 700 IVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 V +VL+VD++ + L+ + A + ER Q + +P Sbjct: 66 TVTAQVLKVDMESGHVTLS--------KRRAEQASAWERMQQLLESGEP 106 >UniRef50_C7RHT6 Hydroxymethylbutenyl pyrophosphate reductase n=8 Tax=Clostridiales Family XI. Incertae Sedis RepID=C7RHT6_ANAPD Length = 686 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 102/277 (36%), Gaps = 28/277 (10%) Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLNT--------ASVPLLTRVAGLTRMMAQN---- 519 D+++ +L V N G+ +N AS V + + + Sbjct: 374 KDLAEKAENDELVHGVVSGFNKGGLTVNVEGINGFVPASQIATYFVKNFKKFVGEEWDLK 433 Query: 520 -IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVER 578 I +N +R+++++ ++ G + + Sbjct: 434 IISIDERKNRLVLSRKEVVE---------DELDGLWEELEEGQVVTGKVARLTDFGAFVE 484 Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 + + + S++ + +D + I +L + K Sbjct: 485 VNGLDG------LLHVSDIAWSRVEHPSDVLNVGDEIEVKILKLNQEKNRISLGRKQLLE 538 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 +N + G ++ G V N+ +FGAFV++ +GLVH+S +S + VE P + G Sbjct: 539 KPFEAFVNQHEVGDVVTGKVVNLLDFGAFVEVADGVEGLVHVSEISWEHVEKPSDELNVG 598 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 D ++VK++ +D +++ L+++ ++ E RR Sbjct: 599 DEIEVKIISIDTDEEKVGLSIKALKEAPERPERRAKR 635 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 64/158 (40%), Gaps = 5/158 (3%) Query: 582 ATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG 641 + + L+ L G T +II+E+ + K Sbjct: 230 YCKNVFRIETVKDLPLQKLSKFKKVGIIAGASTPDEIIEEVVSSMDEF---TKEEFMNSL 286 Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIV 701 +++ + P I++G V +V + FVDI DG++ + ++ + +DP GD + Sbjct: 287 EDSLKKIYPKEIVKGTVIDVKDDEVFVDIQFRADGIIKLDEMTEEEAKDPKNSFNVGDEI 346 Query: 702 KVKVLEVDLQRKRIALTMRLDE--QPGETNARRGGGNE 737 V V+++D ++L+ R E + + A + +E Sbjct: 347 DVFVIKLDDGEGNVSLSTRRVEGMKVWKDLAEKAENDE 384 >UniRef50_A1HTW2 Hydroxymethylbutenyl pyrophosphate reductase n=4 Tax=Veillonellaceae RepID=A1HTW2_9FIRM Length = 655 Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats. Identities = 50/256 (19%), Positives = 101/256 (39%), Gaps = 17/256 (6%) Query: 501 ASVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS + VA LT + Q I + + +R+++L+ + + Sbjct: 404 ASQVAVQHVADLTPYVGQTLELLPIEIDQAKQKIVLSRRKVLEQEQQ-----RRAEELFS 458 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 + + + V + + + S+L + + T+ V Sbjct: 459 RLAEGQIVTGTVSRIADFGVFVDLGGVDG------LIHISDLSWHRVKNPTEVVNIGDEV 512 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 +++++ + K Q + + L+ GM + G VT + FGAFV++ + Sbjct: 513 QVFVQKVDPKAKRISLSLKRVQRDPWYDVVEGLREGMTVAGKVTKLAKFGAFVEVKPGVE 572 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGG 734 GLVH+S L+++ V VV+ G V VK+L +D + KRI+L++ + + + +R Sbjct: 573 GLVHLSELADRRVASAQEVVEVGQTVTVKILGIDKENKRISLSIAQAQQDAERADYQRFL 632 Query: 735 GNERPQNNRPAAKPRG 750 E + G Sbjct: 633 SQESNTLGVTIGEKFG 648 Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 61/174 (35%), Gaps = 7/174 (4%) Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD-IIKELEKPGRDPRPEFKTAQF 638 LA + + + LK FT + T + + EF Sbjct: 221 LAELCRLQGCPTYHVETAQELKIDWFTGVQTVGITAGASTPDWIIEEVYSKMQEFDQLLD 280 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 D M L+PG+IL+G V V FVDIG +G++ ++ L+ E+ VV G Sbjct: 281 QD----MKPLEPGVILKGRVVGVRKDEVFVDIGHKGEGVIPLTELAYPVPENASDVVSEG 336 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQ--PGETNARRGGGNERPQNNRPAAKPRG 750 D + V VL + + L+ + E NE A G Sbjct: 337 DEIDVYVLAPEGDDGPVKLSKVKADNIVAWEKLQAAAQANETVTGKVTAVVKGG 390 >UniRef50_A4J3N5 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridia RepID=A4J3N5_DESRM Length = 672 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 46/255 (18%), Positives = 84/255 (32%), Gaps = 16/255 (6%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I + +R+ +L+ + L + + Sbjct: 434 RVIEMNKQRKKVVVSRKAVLEEQN-----ARKREELLASLQEGQIVKGIVRRITNFGAFV 488 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + SE+ + + + + ++ +++ K Sbjct: 489 DLGGLDG------LLHISEMSWHRINHPQEVVKVGDELEVMVLKVDTQNEKISLGLKQVL 542 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 G I V + FGAFV + +GLVHIS L+++ VE P VVK Sbjct: 543 PNPWDNVEEKYPVGNIFNAKVVRLAPFGAFVQLEPGVEGLVHISHLADRHVEKPEDVVKE 602 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 G+ V+VKVL +D KR+ L++R RR RP+ + P Sbjct: 603 GEEVQVKVLSMDPSEKRVRLSIREV-----NGERRSAREARPRKQEEVQEQNVMNETPEE 657 Query: 758 NSAMMDALAAAMGKK 772 + D +K Sbjct: 658 KITLGDVFGDMFKEK 672 Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 58/176 (32%), Gaps = 3/176 (1%) Query: 578 RILAATQQALKDLMGNSSELRNLKAS-DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 +I T + + + G T II+E++K + Sbjct: 224 KICQETGTPTYHVESARELRKEWFLGHEIVGLTAGASTPDAIIEEVKKRMNEMDQMTNGE 283 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + + Q G +++G V V VDI +G++ ++ V++ +VK Sbjct: 284 EGMSEAMEVKSPQAGELVKGIVVQVGMDEVLVDIRAKSEGVIPRKEMAFYGVDNLQEIVK 343 Query: 697 AGDIVKVKVLEVDLQRKRIALT--MRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 GD ++ V++ + +I L+ E+ + + G Sbjct: 344 VGDEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGG 399 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 4/126 (3%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 K G +IK + G+ + + ++ G I++G V V G Sbjct: 342 VKVGDEIECVVIKAEDNEGKIILSKERADAEKAWDGLEEAMEQGTIIKGVVREVVKGGML 401 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGE 727 VD+ + S + +VED + +V+V+E++ QRK++ ++ + + Sbjct: 402 VDV--GVRAFLPASLVERGYVEDLSKYLN--QEFEVRVIEMNKQRKKVVVSRKAVLEEQN 457 Query: 728 TNARRG 733 R Sbjct: 458 ARKREE 463 >UniRef50_C0QM45 RpsA1 n=2 Tax=Desulfobacteraceae RepID=C0QM45_DESAH Length = 486 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 7/226 (3%) Query: 527 NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQA 586 +R+ LL + ++ F + + L S Y ++ + Sbjct: 177 RNIVVSRRDLLNLENK-----DRQDAFFKEAKEGDILTGSVTKLMPYGAFIELVPGVEGM 231 Query: 587 LKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMN 646 + S + + E V + KE + + Sbjct: 232 AHISELSWSRVDKAEEVVKQGETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAG 291 Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKV 705 + PG L G V + FGAFV+I DGLVH+S +S+ + + VV G++V+V V Sbjct: 292 TIAPGDQLTGKVVRLAPFGAFVEIAPGMDGLVHLSEMSHTRRIVKADDVVTLGEMVQVVV 351 Query: 706 LEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++D++++RI+L+++ P A + + + G Sbjct: 352 KDIDIEKRRISLSIKDALGDPWAGIAEKYAPGTIVETTMEKREQFG 397 Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats. Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%) Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA----QFADGVETMNDLQPGMILEGAVTN 660 E + T II E+ GR+ + + + G IL G+VT Sbjct: 155 EDTESYVGSTFNFIITRFEEGGRNIVVSRRDLLNLENKDRQDAFFKEAKEGDILTGSVTK 214 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK----RIA 716 + +GAF+++ +G+ HIS LS V+ VVK G+ VKVK+L+++ + +I+ Sbjct: 215 LMPYGAFIELVPGVEGMAHISELSWSRVDKAEEVVKQGETVKVKLLKIETKEGADMPKIS 274 Query: 717 LTMR--LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 L+++ L E P ++ A ++ P G Sbjct: 275 LSIKQALSEDPWDSQAGTIAPGDQLTGKVVRLAPFG 310 Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 69/227 (30%), Gaps = 11/227 (4%) Query: 513 TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEA 572 + ++ + G + L L ++ AG + + L V Sbjct: 252 GETVKVKLLKIETKEGADMPKISLSIKQALSEDPWDSQAGTIA---PGDQLTGKVVRLAP 308 Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 + I + + + + D V ++K+++ R Sbjct: 309 FGAFVEIAPGMDGLVHLSEMSHTR----RIVKADDVVTLGEMVQVVVKDIDIEKRRISLS 364 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 K A PG I+E + FG F+ + GL+ S S + Sbjct: 365 IKDALGDPWAGIAEKYAPGTIVETTMEKREQFGIFLSLEPGVTGLLPASVASKASKPSDY 424 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIAL---TMRLDEQPGETNARRGGGN 736 +K GD V V V D +++RI+L M+ + A Sbjct: 425 DSLKPGDKVTVMVESADEEKRRISLAPPEMKDSDD-WRKFAPAQKAP 470 >UniRef50_Q5M0R3 30S ribosomal protein S1 n=88 Tax=Bacilli RepID=Q5M0R3_STRT1 Length = 417 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 46/248 (18%), Positives = 90/248 (36%), Gaps = 11/248 (4%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 A+ EN +R+++++ + + + + ++ Sbjct: 173 AKIKEVDPAENRFILSRREVVEAEAIEAR-----KEVFSKLEVGSVVTGKVARLTSFGAF 227 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 + + + + DE + + +++ K Sbjct: 228 IDLGGVDGLVHVTELSHERNVSPKSVVSVGDE------IEVKVLAIDEEAGRVSLSLKAT 281 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 L G ++EG V +T+FG FV++ DGLVHIS +S+K VE+P V+ Sbjct: 282 TPGPWDGVEQKLAAGDVIEGKVKRLTDFGGFVEVLPGIDGLVHISQISHKRVENPKDVLS 341 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPA 756 G V VKVLEV+ +R++L+++ E+ + + RP + + P Sbjct: 342 VGQDVTVKVLEVNADAERVSLSIKALEERPANAEGENNEKRQSRPRRPKRQEKRDYELPE 401 Query: 757 GNSAMMDA 764 S A Sbjct: 402 TQSGFSMA 409 Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 8/214 (3%) Query: 536 LLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSS 595 LL FE+ + + + A + + ++ T + Sbjct: 10 LLLEDFFRMNEFEELLNSVSEVSTGDVVTAEVISVDN-DQANVVIEGTGIEGVLTRRELT 68 Query: 596 ELRNLKASDFT--DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 R+ +D E V + ++ + + + + + + + Sbjct: 69 NDRDANVADLVKDGETLEVLVLRQVVGKDTDTVTYLVSKKRLEARKAWDKLVGREEEVVT 128 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 ++G G V+ G + S + +FV + G K+ EVD Sbjct: 129 VKGT--RAVKGGLSVEFE-GLRGFIPASMIDTRFVRNTEQF--VGQEFDAKIKEVDPAEN 183 Query: 714 RIALTMRLDEQPGETNARRGGGNERPQNNRPAAK 747 R L+ R + AR+ ++ + K Sbjct: 184 RFILSRREVVEAEAIEARKEVFSKLEVGSVVTGK 217 >UniRef50_C9RMY1 Ribosomal protein S1 n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMY1_FIBSS Length = 590 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 43/269 (15%), Positives = 98/269 (36%), Gaps = 19/269 (7%) Query: 490 CVNAVGVDL-NTASVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLG 543 V+ G+D S L ++ + ++ Q I + +R+ +L+ R Sbjct: 141 VVDLFGIDAFLPGSQIDLRQIPDINALIGQEFDLKVIKVNKARRNIVVSRRVVLEEERN- 199 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 +Q L + + + + + + +++ + + Sbjct: 200 ----KQRGDVLETLEKNQVRKGIVKNITDFGAFIDLGGVDG------LLHITDMSYKRIN 249 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 ++ V ++ + K + + G I++G V ++T+ Sbjct: 250 HPSEMLQLGQEVEVMVLDFNDKKERISLGMKQLKPHPWKDIAERYPEGAIVKGKVVSITD 309 Query: 664 FGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 +GAFV++ +GL+H+S +S + V+ P ++ G V+ VL+V+ +RI+L M+ Sbjct: 310 YGAFVELDSGVEGLIHVSEMSWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQL 369 Query: 723 E-QPGETNARRGGGNERPQNNRPAAKPRG 750 E P ++ R G Sbjct: 370 ESDPWDSIETELPPGARVVGEIRNIASFG 398 Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 92/273 (33%), Gaps = 15/273 (5%) Query: 455 AELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVG--VDLNTASVPLLTRVAGL 512 E + + K + + D+++ + + G V+L++ L+ V+ + Sbjct: 272 KERISLGMKQLKPHPW-KDIAERYPEGAIVKGKVVSITDYGAFVELDSGVEGLI-HVSEM 329 Query: 513 T-----RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ--CAGFLRINHGDNPLDA 565 + + ++ + ++ ++ + LG K E + Sbjct: 330 SWTQHVKHPSKILTVGQEVEAVVLKVEEDAERISLGMKQLESDPWDSIETELPPGARVVG 389 Query: 566 STVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKP 625 + ++ I L+ S K + + V ++ ++K Sbjct: 390 EIRNIASFGAFVEIKEGV----DGLIHVSDMSWTKKITHPNEMVKKGDKVECVVLAVDKE 445 Query: 626 GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 R K + ++G + + + G V++ +G + +S L+ Sbjct: 446 KRRISLSMKHLTEDPWDSIDSTYPVDSEVKGKIVRMLDRGVVVELADGIEGFIPVSKLTA 505 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 ++++ P K GD V V E+D ++I L+ Sbjct: 506 EYIKVPADAFKVGDEVPAVVTEIDQNNRKIYLS 538 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 4/145 (2%) Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 D + G + K ++ GR + K + ++ G +T Sbjct: 77 KDTDSLELGSEIEVFVEKLEDEDGRLILSKQKADFVRVWDRIHAAFENNEVVRGTLTKRI 136 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 G VD+ D + S + + + D + + G +KV++V+ R+ I ++ R+ Sbjct: 137 KGGVVVDL-FGIDAFLPGSQIDLRQIPDINAL--IGQEFDLKVIKVNKARRNIVVSRRVV 193 Query: 723 EQPGETNARRGGGNERPQNNRPAAK 747 + E N +RG E + N+ Sbjct: 194 LE-EERNKQRGDVLETLEKNQVRKG 217 >UniRef50_B3WE79 30S Ribosomal protein S1 n=52 Tax=Firmicutes RepID=B3WE79_LACCB Length = 439 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 85/259 (32%), Gaps = 13/259 (5%) Query: 485 AVVEDCVNAVGVDLNT-------ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLL 537 V G+ +N AS+ V L++ + + E +NR L Sbjct: 121 TAPVTSVVKGGLVVNAGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILS 180 Query: 538 KVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSEL 597 + + E + ++ + + + Sbjct: 181 HRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFD--- 237 Query: 598 RNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGA 657 +D + + ++ K + G +L G Sbjct: 238 ---HVDKPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGT 294 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V +T FGAFV++ +GLVHIS +S++ V P V+K G V+VKVL VD R+AL Sbjct: 295 VKRLTTFGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLAL 354 Query: 718 TMRLDEQPGETNARRGGGN 736 +++ ++ + Sbjct: 355 SIKALQERPAGSEEESHEG 373 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 6/105 (5%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSLSNKFVEDPHTVVKA 697 AD ++++ ++ G ++ V V + V I +G+V I LS + ++D H V K Sbjct: 14 ADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELSTQPIDDIHDVAKV 73 Query: 698 GDIVKVKVLEV---DLQRKRIALTMRLDE--QPGETNARRGGGNE 737 GD + + VL D + + L+ R E + + + E Sbjct: 74 GDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGE 118 >UniRef50_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW Length = 687 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 48/235 (20%), Positives = 88/235 (37%), Gaps = 15/235 (6%) Query: 512 LTRMMAQNIVAWRDENGQ----FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAST 567 + R ++ I+ + + +R++L+ + +Q F Sbjct: 464 INRELSFKIIEFNRNKRRGSQVVLSRKELVAEEK-----AKQKKQFWEEIEEGQVRKGRI 518 Query: 568 VHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR 627 Y + + ++ + +D + I L++ Sbjct: 519 KRLVDYGAFIDLGGYEGLLHVSEIAHT------RIDQPSDVLQEGEEIDVYILALDREKE 572 Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 K + M Q G I+EG V + FGAFV+I DGLVHIS L+N Sbjct: 573 RVSLSRKKLLKSPWEIVMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVHISQLANHR 632 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 VE P VV+ + +K+K+L +D + KRI L+++ E + ++ +N Sbjct: 633 VEKPEDVVQVNEKIKIKILSIDPEEKRIGLSLKEALNEMENQEVQDYMEKQEENE 687 Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 64/176 (36%), Gaps = 10/176 (5%) Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 AS + PE V +I + D + R + T Sbjct: 233 VRTFQIQKASEIKPEWLDGVSKIGITAGASTPDWIIKEVLDRMTLYEEEKMLDENQETNQ 292 Query: 617 DIIKELEKPGRDPRPEFKT---------AQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 + +E ++ PE K A+ + G +++G V V + Sbjct: 293 ETSQETQETQEIQEPEVKEEVSANEESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEVM 352 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 VD+G +G++ + +S + ++ +V+ GD ++V VL+ D I L+ + + Sbjct: 353 VDVGGKSEGIIPLREMSLQDIDSAKELVEVGDEIEVMVLKWD-DDGTILLSKKKVD 407 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 23/222 (10%), Positives = 66/222 (29%), Gaps = 14/222 (6%) Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 ++ + + E + + + + V+ + ++ + + Sbjct: 310 KEEVSANEESFAKLEAEMADFTTPNKGDVIKGKVIQVLDDEVMVDVGGKSEGIIPLREMS 369 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + + ++ + + G + K E + G + Sbjct: 370 LQ-----DIDSAKELVEVGDEIEVMVLKWDDDGTILLSKKKVDAKILLDELEESFKEGKV 424 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 + G VT G VD+ + S + + +V++ + K++E + ++ Sbjct: 425 ITGTVTGSVKGGLLVDV--GIVAFLPASHVEDGYVKNLDEY--INRELSFKIIEFNRNKR 480 Query: 714 R---IALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGRE 752 R + L+ + E E A++ K R + Sbjct: 481 RGSQVVLSRK--ELVAEEKAKQKKQFWEEIEEGQVRKGRIKR 520 >UniRef50_P38494 30S ribosomal protein S1 homolog n=22 Tax=Bacillales RepID=RS1H_BACSU Length = 382 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 59/272 (21%), Positives = 107/272 (39%), Gaps = 14/272 (5%) Query: 478 QLARKLDAVVEDCVNAVGVDLNT-------ASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 + +A V+D V G+ ++ AS+ V T + + E + Sbjct: 100 ETKEVFEAEVKDVV-KGGLVVDIGVRGFIPASLVEAHFVEDFTDYKGKTLSLLVVELDRD 158 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +NR L + + + + L+ + LD + I Sbjct: 159 KNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIGGIDGLVHISQ 218 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + +S + + E V + +++ K + ++P Sbjct: 219 LSHSHVEKPSDVVEEGQE------VKVKVLSVDRDNERISLSIKDTLPGPWNQIGEKVKP 272 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G +LEG V + +FGAFV+I +GLVHIS +SNK + PH V++ G VKVKVL+V+ Sbjct: 273 GDVLEGTVQRLVSFGAFVEILPGVEGLVHISQISNKHIGTPHEVLEEGQTVKVKVLDVNE 332 Query: 711 QRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 +RI+L+MR E+ + + + + Sbjct: 333 NEERISLSMRELEETPKADQEDYRQYQAKEET 364 Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%) Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVV 695 + + G +++G VT V + V+I V Q G++ IS LS+ VE VV Sbjct: 2 TEEMNQIDVQVPEVGDVVKGIVTKVEDKHVDVEIINVKQSGIIPISELSSLHVEKASDVV 61 Query: 696 KAGDIVKVKVLEVDLQRKRIALTMRL--DEQPGETNARRGGGNERPQNNRPAAKPRG 750 K D + +KV +V+ + L+ R ++ E ++ E + G Sbjct: 62 KVDDELDLKVTKVEDDA--LILSKRAVDADRAWEDLEKKFETKEVFEAEVKDVVKGG 116 >UniRef50_Q3YRK4 SSU ribosomal protein S1P n=21 Tax=Rickettsiales RepID=Q3YRK4_EHRCJ Length = 567 Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 95/229 (41%), Gaps = 8/229 (3%) Query: 512 LTRMMAQNIVAWRDENGQFQ-NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 L + I+ ++ G +R+ +L+ S K+ +L + + ++ Sbjct: 187 LGKKQKFRILKMDNKQGNIVVSRKAILEESLADAKSL-----YLSQLNEGDIIEGKVKSI 241 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 Y V I + + D + + +++ + S + TV I ++++ + Sbjct: 242 TKYGVFIEIHESPSVGVVDGLLHITDISWSRVSHPSAVFSCGQTVKTKIIKIDRENKKIS 301 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K + + I +G VT++ ++G FV++ +GLVH+S +S Sbjct: 302 LGVKQLEESPWSNIEKKYPVDSIHKGIVTSIEDYGVFVELETGIEGLVHVSEVSWTKNSL 361 Query: 691 P-HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNE 737 P + + G+ ++VKVL +D + R++L+M+ E P + + Sbjct: 362 PINQLFMRGEEIQVKVLSIDTAKSRMSLSMKRCQENPWQAFTLKYPLGS 410 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 72/233 (30%), Gaps = 19/233 (8%) Query: 513 TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEA 572 + + I+ EN + L V +L + D+ E Sbjct: 283 GQTVKTKIIKIDRENKKIS-----LGVKQLEESPWSNIEK---KYPVDSIHKGIVTSIED 334 Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 Y V + + ++ L+ S + + + ++ Sbjct: 335 YGVFVEL----ETGIEGLVHVSEVSWTKNSLPINQLFMRGEEIQVKVLSIDTAKSRMSLS 390 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV-----DIGVHQDGLVHISSLSNK- 686 K Q G ++ + N+TN G FV + +GL+ + LS Sbjct: 391 MKRCQENPWQAFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSL 450 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNER 738 E GD V+ K+L ++ + +I L ++ E P ++ ++ Sbjct: 451 SPEAAVKKYSIGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDK 503 Score = 42.4 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 53/176 (30%), Gaps = 13/176 (7%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAA-TQQALKDLMGNSSELRNLKASDFTDE 608 F + + + + ++ L+ + +L + Sbjct: 399 WQAFTLKYPLGSVVSTKIKNITNLGIFVSFEDNTLNDGIEGLIRTTELSWSLSPEAAVKK 458 Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV-TNFGAF 667 +V I + K ++ ++ + G + VT V + G Sbjct: 459 YSIGDSVEAKILMINPNKSKIDLGVKQLEYDPFLDLLKKTNLGDKIPVTVTKVVEDTGIL 518 Query: 668 VDIGVHQDG---LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 VD+ + L+ L + + GD ++ +VL ++ + L+++ Sbjct: 519 VDVFNGSNSFNLLIEQEYLPD------NKKFFPGDKLEAEVLLIETYN--MVLSLK 566 >UniRef50_Q2RIU7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RIU7_MOOTA Length = 736 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 50/245 (20%), Positives = 87/245 (35%), Gaps = 18/245 (7%) Query: 508 RVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP 562 V L + Q I R +N +R+ +L+ +Q Sbjct: 486 YVEDLNAYLGQTLRLRVIELDRSKNKVVLSRKAILEEEYE-----KQRQATWNSLEVGQV 540 Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL 622 + + + + D + I + Sbjct: 541 RKGIVRRLTNFGAFVDLGGVDGLLHVSEISWG------RVEHPRDALSEGQEIEVKILGI 594 Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 ++ K G I+EG + + FGAFV++ +GLVHIS Sbjct: 595 DREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEGKILRLAPFGAFVEVEPGIEGLVHISQ 654 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 L+++ V+ P VV GDI+ VKVL VD Q +R++L++R + E N ++ E+P N Sbjct: 655 LADRHVDKPEDVVSIGDIIPVKVLGVDQQAQRMSLSLR--QAIREKNRKQAKPAEKPAEN 712 Query: 743 RPAAK 747 + + Sbjct: 713 QNESG 717 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 12/189 (6%) Query: 568 VHPEAYPVVER-ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 + E VV+ +L + + + T+ + EL++ Sbjct: 455 IQGEVIEVVKGGLLVDVGVRGFLPASLVERGYVEDLNAYLGQ-----TLRLRVIELDRSK 509 Query: 627 RDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 K + + T N L+ G + +G V +TNFGAFVD+G DGL+H+S Sbjct: 510 NKVVLSRKAILEEEYEKQRQATWNSLEVGQVRKGIVRRLTNFGAFVDLG-GVDGLLHVSE 568 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQN 741 +S VE P + G ++VK+L +D + +++L + L P +T A R + Sbjct: 569 ISWGRVEHPRDALSEGQEIEVKILGIDREEGKVSLGRKQLLPNPWDTAAERYPVGTIVEG 628 Query: 742 NRPAAKPRG 750 P G Sbjct: 629 KILRLAPFG 637 Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 7/126 (5%) Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 + R E + M +L+ G ++ G V +T+ VD+G +G++ ++ LS++ Sbjct: 346 EEQRNEMQQITAR-----MPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHR 400 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ--PGETNARRGGGNERPQNNRP 744 V DPH VV GD + V VL + + L+ R ++ E E Q Sbjct: 401 NVTDPHEVVAVGDTINVMVLRPENEEGHPVLSKRRADRRVAWEKLEEHLASGEEIQGEVI 460 Query: 745 AAKPRG 750 G Sbjct: 461 EVVKGG 466 Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 10/218 (4%) Query: 540 SRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRN 599 +Q + N + + V V+ + ++ + + + + Sbjct: 345 PEEQRNEMQQITARMPELRRGNVVAGTVVQITDNEVMVDVGGKSEGVIPLNELSHRNVTD 404 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 + V + +E R + + A + L G ++G V Sbjct: 405 PHEVVAVGDTINVMVLRPENEEGHPVLSKRRADRRVA----WEKLEEHLASGEEIQGEVI 460 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 V G VD+ G + S + +VED + + G ++++V+E+D + ++ L+ Sbjct: 461 EVVKGGLLVDV--GVRGFLPASLVERGYVEDLNAYL--GQTLRLRVIELDRSKNKVVLSR 516 Query: 720 RLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 + + E ++ K R G Sbjct: 517 KAILE--EEYEKQRQATWNSLEVGQVRKGIVRRLTNFG 552 >UniRef50_Q2S1M7 Ribosomal protein S1, putative n=2 Tax=Rhodothermaceae RepID=Q2S1M7_SALRD Length = 871 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/319 (18%), Positives = 115/319 (36%), Gaps = 33/319 (10%) Query: 452 DPLAELVKIDPKSIGVGQY----QHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLT 507 +P E + + + + + Q + Q ++ + L+ V++ V+ GV ++ V L Sbjct: 332 NPENENIVVSHRELIEHELEEQRQEILEQLEVGQVLEGTVKNIVDF-GVFIDLGGVDGLL 390 Query: 508 RVAGLT--------------RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGF 553 + L+ + + ++ + +E + L + +L ++Q Sbjct: 391 HITDLSWGRVSHPSEVVELDQELEVVVLDYEEERQRIS-----LGLKQLRDHPWDQIG-- 443 Query: 554 LRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP 613 + ++ V Y I + L+ S + Sbjct: 444 -NKYDEGDVVEGKVVSITNYGAFVEIEKGI----EGLVHISEMSWTRHIEHPSQMVSLGQ 498 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V I +++ R K + + G +L G V N+TNFG FV+I Sbjct: 499 VVDVKILNIDQEERKISLGMKQLEPDPWEGISDRYPAGTVLTGTVRNITNFGVFVEIEPG 558 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNAR 731 DGLVH+S LS K + P +V + V +L +D +R+RI+L + + P + A Sbjct: 559 IDGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNIDEERRRISLGHKQVKTNPWDQFAD 618 Query: 732 RGGGNERPQNNRPAAKPRG 750 + +G Sbjct: 619 AYEEGNDTTGEVVRVEDKG 637 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 6/212 (2%) Query: 535 QLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 QL+ K + I + ++ + + + Sbjct: 252 QLVLSKEQADKV-RRWQRVEEIYENEEVIEGTIIR--RIKGGMIVELFDGMEAFLPGSQI 308 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 + + + V + E E R + E + L+ G +L Sbjct: 309 DVRPVRDFESYLETRMEFKIVK-LNPENENIVVSHRELIEHELEEQRQEILEQLEVGQVL 367 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 EG V N+ +FG F+D+G DGL+HI+ LS V P VV+ ++V VL+ + +R+R Sbjct: 368 EGTVKNIVDFGVFIDLG-GVDGLLHITDLSWGRVSHPSEVVELDQELEVVVLDYEEERQR 426 Query: 715 IALTMR-LDEQPGETNARRGGGNERPQNNRPA 745 I+L ++ L + P + + + + + Sbjct: 427 ISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVS 458 Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 84/276 (30%), Gaps = 28/276 (10%) Query: 458 VKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA------- 510 + + K + + ++ ++ V N + L ++ Sbjct: 427 ISLGLKQLRDHPWDQIGNKYDEGDVVEGKVVSITNYGAFVEIEKGIEGLVHISEMSWTRH 486 Query: 511 --------GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNP 562 L +++ I+ E R+ L + +L P +E + Sbjct: 487 IEHPSQMVSLGQVVDVKILNIDQEE-----RKISLGMKQLEPDPWEGISDRYP---AGTV 538 Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL 622 L + + + V I L+ S K D + +I + Sbjct: 539 LTGTVRNITNFGVFVEIEPGI----DGLVHVSDLSWTKKIRHPGDMVDEEQELDVVILNI 594 Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 ++ R K + + + + G G V V + G V + + + V S Sbjct: 595 DEERRRISLGHKQVKTNPWDQFADAYEEGNDTTGEVVRVEDKGLVVQLPLDVEAFVPGSE 654 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 L N + GD ++++V+ D +K I L+ Sbjct: 655 LKNGP-KAFKNHYHEGDELELQVIRFDKDQKDIVLS 689 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 60/165 (36%), Gaps = 6/165 (3%) Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 + +D +++ +VE + + + + +F +E+ ++ Sbjct: 184 DVVDETSIDVREQDIVEGRVLRVNEDYVVIDIGYKSDGIVSRDEFGEEEIHPGDTVEVYL 243 Query: 621 ELEKPGRDPRPEFKTAQFAD---GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 E K RD + Q + ++EG + G V++ + Sbjct: 244 E-RKEDRDGQLVLSKEQADKVRRWQRVEEIYENEEVIEGTIIRRIKGGMIVELFDGMEAF 302 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 + S + + V D + ++ ++ K+++++ + + I ++ R Sbjct: 303 LPGSQIDVRPVRDFESYLET--RMEFKIVKLNPENENIVVSHREL 345 >UniRef50_D1N749 Ribosomal protein S1 n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N749_9BACT Length = 607 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 83/213 (38%), Gaps = 7/213 (3%) Query: 532 NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLM 591 +R+ L + + +E A + + + +Y I ++ Sbjct: 380 SRKISLGLRQKERNPWEVLAEKYPVGRR---ITGKVRNMTSYGAFVEIENDI----DGMI 432 Query: 592 GNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 S K ++ + V II ++ + K A+ + + G Sbjct: 433 HVSDMSWTRKINNPNEVLKPGQEVEAIILDINPEQQRISLGLKQAETDPWANINDLYKVG 492 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 +++G VT + FGAFV++ DGL+HIS LS VE V+ GD V+ +V++VD Sbjct: 493 DVVKGKVTKIAAFGAFVELTNKIDGLIHISQLSRDRVEKVKDVLNVGDEVEARVIKVDTD 552 Query: 712 RKRIALTMRLDEQPGETNARRGGGNERPQNNRP 744 +RI L+++ + + E +P Sbjct: 553 ERRIGLSIKAVGENFSPEDLKAAEEEYTAALKP 585 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 83/235 (35%), Gaps = 13/235 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I D +R++LL+ + +Q + L D + + Sbjct: 196 KIIKINLDRRNIVVSRRELLEETLK-----DQRSKLLGEMKVDELRKGVVKNITDFGAFI 250 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + S ++ + +I ++K K Sbjct: 251 DLGGVDGLLHITDISWG------RISHPSEVLKVGEEIEVVIIGIDKEKERVSLGLKQKT 304 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + ++ G + G V N+ +GAFV+I +GL+H+S +S K V V+ Sbjct: 305 RNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEIETGVEGLIHVSEMSWTKRVSKASDVLS 364 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 G+ V+ VL++D ++I+L +R E P E A + R G Sbjct: 365 IGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEKYPVGRRITGKVRNMTSYG 419 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 83/212 (39%), Gaps = 6/212 (2%) Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 L K + + ++ V+ Y I + ++ L+ S Sbjct: 299 GLKQKTRNPWDDVVSKYPKGSKINGKVVNIMPYGAFVEI----ETGVEGLIHVSEMSWTK 354 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + S +D V ++ ++++ R + + G + G V N Sbjct: 355 RVSKASDVLSIGEEVEAVVLDIDRDSRKISLGLRQKERNPWEVLAEKYPVGRRITGKVRN 414 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +T++GAFV+I DG++H+S +S + +P+ V+K G V+ +L+++ +++RI+L + Sbjct: 415 MTSYGAFVEIENDIDGMIHVSDMSWTRKINNPNEVLKPGQEVEAIILDINPEQQRISLGL 474 Query: 720 RLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 + E P + + G Sbjct: 475 KQAETDPWANINDLYKVGDVVKGKVTKIAAFG 506 Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 13/204 (6%) Query: 551 AGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT---- 606 FL ++ + +D E+ + + + + KA F Sbjct: 37 ESFLDFSNIPSSMDELLQSSESTNAFTKGKIVEGKIVAKRPDGALVDIGYKAEGFVPASE 96 Query: 607 ----DEKFGVPTVTDIIKELEKPGRDPRPEFKTA-QFADGVETMNDLQPGMILEGAVTNV 661 DE + ++E+E P + A + G +++G + + Sbjct: 97 FLKFDEANIGDKIDVYLEEIENRNNMPEISLEKAYSIKAWNRITTEYGEGHVVKGFMRHR 156 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR- 720 G VD+ + S L V + G VK+++++L R+ I ++ R Sbjct: 157 VKGGIMVDVE-GFPAFLPGSQLDVGPVHNMDDY--IGKEFDVKIIKINLDRRNIVVSRRE 213 Query: 721 LDEQPGETNARRGGGNERPQNNRP 744 L E+ + + G + R Sbjct: 214 LLEETLKDQRSKLLGEMKVDELRK 237 >UniRef50_D2R2F1 RNA binding S1 domain protein n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R2F1_9PLAN Length = 502 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 48/260 (18%), Positives = 91/260 (35%), Gaps = 16/260 (6%) Query: 501 ASVPLLTRVAGLTRMMAQNI-----VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS L RV L ++ Q I A +R+ +L+ + K + Sbjct: 235 ASQAGLYRVENLGDLVGQRITCVITEANERRGNVVLSRRAVLEREKESAK-----KELMA 289 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 + + + + + M + ++ V Sbjct: 290 SIAIGDMREGVVRKIQDFGAFVDMGGIDGLIHISQMSWD------RIKHPSEILTEGQKV 343 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 I++++ + Q G I++G V+ + FGAFV + + Sbjct: 344 RVRIEKIDPETGKIGLSLRNQQEHPWTGIDQKFPVGSIVKGTVSRLAAFGAFVKLSPGVE 403 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 GL+HIS L++ V VVK G V+VK+L V + +RI+L+++ Q + + Sbjct: 404 GLIHISELAHNRVYAVQNVVKEGQEVEVKILTVSAEDQRISLSLKATLQAPAKSEKTKAE 463 Query: 736 NERPQNNRPAAKPRGREAQP 755 + P A + + P Sbjct: 464 AAPEVDEPPRAPVVPKRSGP 483 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 36/90 (40%), Gaps = 2/90 (2%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 +D++ G +++ + G +I G + S VE+ + G + Sbjct: 199 NWSDIREGGLVDAKIVAANTGGLECEIAGGVRGFIPASQAGLYRVENLGDL--VGQRITC 256 Query: 704 KVLEVDLQRKRIALTMRLDEQPGETNARRG 733 + E + +R + L+ R + + +A++ Sbjct: 257 VITEANERRGNVVLSRRAVLEREKESAKKE 286 >UniRef50_B7IE33 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Thermosipho africanus TCF52B RepID=B7IE33_THEAB Length = 811 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 76/227 (33%), Gaps = 15/227 (6%) Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ 584 +R+ + EQ F + ++ E + RI Sbjct: 427 KRLNIILSRKAFIN---------EQKEKFFNERKEGDIIEGIVKKIEKFGAFVRIFE--G 475 Query: 585 QALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVET 644 S +LK D E +V IK+++K R K Sbjct: 476 IDGLLPNSEVSYDTSLKVEDVLSE---GQSVKLYIKKIDKENRKILLSLKELMPDPWQNV 532 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + G I+ G V N+ ++G +V++ DGLVHI + +V GDIVKV Sbjct: 533 TKKYKVGDIVSGKVKNILSYGFYVNLEPGVDGLVHIDDIFWGRRGKISDIVSVGDIVKVM 592 Query: 705 VLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 + E+D K++ L+ + E P E + +G Sbjct: 593 IKEIDPNNKKMRLSYKEVEGDPWENIEEKYPVGNTITGTVSFILDKG 639 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 9/221 (4%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +NR+ LL + L P ++ + + + +Y + D Sbjct: 513 ENRKILLSLKELMPDPWQNVTK---KYKVGDIVSGKVKNILSYGFYVNLEPGV-----DG 564 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + + ++ + +D V +IKE++ + R +K + Sbjct: 565 LVHIDDIFWGRRGKISDIVSVGDIVKVMIKEIDPNNKKMRLSYKEVEGDPWENIEEKYPV 624 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G + G V+ + + G V+I G IS +S ++ V+ G VK + E+D Sbjct: 625 GNTITGTVSFILDKGVIVEIERGISGFCPISEISWNYISSVKDVLNEGQKVKAVITELDK 684 Query: 711 QRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + +++ L+++ + E P + + G Sbjct: 685 ENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIKELKSG 725 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 1/130 (0%) Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 I E + K + N+ + G I+EG V + FGAFV I D Sbjct: 418 KIIKFEERGKRLNIILSRKAFINEQKEKFFNERKEGDIIEGIVKKIEKFGAFVRIFEGID 477 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGG 734 GL+ S +S V+ G VK+ + ++D + ++I L+++ L P + ++ Sbjct: 478 GLLPNSEVSYDTSLKVEDVLSEGQSVKLYIKKIDKENRKILLSLKELMPDPWQNVTKKYK 537 Query: 735 GNERPQNNRP 744 + Sbjct: 538 VGDIVSGKVK 547 Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 11/139 (7%) Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 S D V +I EL+K R R K Q + ++ + G I+ V Sbjct: 662 ISSVKDVLNEGQKVKAVITELDKENRKMRLSIKRVQENPWKKFKDNHKIGDIVAVKVIK- 720 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV--DLQRKRIALTM 719 ++ G + + GD +KVK++++ D + RI + Sbjct: 721 -------ELKSGYVGACENVEI-YLPKSHVLKEITLGDELKVKIIQIKEDGEILRITASE 772 Query: 720 RLDEQPGETNARRGGGNER 738 + E ++ + Sbjct: 773 KELENEKVIDSLKEEFENE 791 >UniRef50_B1I3Y7 Hydroxymethylbutenyl pyrophosphate reductase n=3 Tax=Clostridiales RepID=B1I3Y7_DESAP Length = 677 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 11/219 (5%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 A+ I + +R+ LL+ + L + + + Sbjct: 456 ARIIELNKARKKVILSRKVLLEEEY-----SRKRKETLETTQEGDVVKGVVRRLTQFGAF 510 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 I + + SE+ + + ++ + + +++ K Sbjct: 511 VDIGGLDG------LLHISEISWHRINHPSEVLKVGDELEVQVLRIDRENEKVSLSLKQV 564 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + + + G ++ V + FGAFV++ +GLVHIS L++ V P V+ Sbjct: 565 LPNPWEQVVENYPVGSVVSARVVRLVPFGAFVELEPGVEGLVHISHLADWHVAKPEDVIA 624 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 G + VKVL VD + KRI L++R + + + +G Sbjct: 625 EGQQINVKVLSVDDENKRIRLSLREVVKDKDYHNDQGSE 663 Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 49/143 (34%), Gaps = 4/143 (2%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 + G ++K + GR + + G + G V V G Sbjct: 365 VQVGDEIDVWVVKAEDNEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGGLL 424 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGE 727 VD+ + S + +VED G + +++E++ RK++ L+ ++ + Sbjct: 425 VDL--GVRSFLPASQVERGYVEDLSQY--VGREISARIIELNKARKKVILSRKVLLEEEY 480 Query: 728 TNARRGGGNERPQNNRPAAKPRG 750 + R+ + + R Sbjct: 481 SRKRKETLETTQEGDVVKGVVRR 503 Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 2/102 (1%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+ G + V VD+G +G+V + LS V P VV+ GD + V V++ + Sbjct: 321 GDIVRGVIVQVGQDEVLVDVGAKSEGVVPLRELSCYDVSSPDEVVQVGDEIDVWVVKAED 380 Query: 711 QRKRIALTMRLDE--QPGETNARRGGGNERPQNNRPAAKPRG 750 RI L+ + + +T + G E + G Sbjct: 381 NEGRIILSKGRADAVKAWDTLDKAFHGGETVRGVVREVVKGG 422 >UniRef50_Q1MQB8 Ribosomal protein S1 n=2 Tax=Desulfovibrionaceae RepID=Q1MQB8_LAWIP Length = 574 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 13/221 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + R + +R+ LL+ R + L+ + + Y V Sbjct: 170 RVLKINRRRSNVIVSRRVLLEEERDSKR-----QDLLQTISEGQVVVGKVKNVTEYGVFV 224 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + +++ + + + + +K + K Sbjct: 225 DLGGLDG------LLHITDMSWKRIRHPREMVNLGQELELKVLSFDKENQKVSLGLKQLV 278 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV-EDPHTVVK 696 + G VTN+ ++G FV++ +GLVHIS +S P +V Sbjct: 279 PDPWQDITERFPETSHHVGKVTNLVDYGVFVELESGVEGLVHISEMSWTRKLRHPSQMVH 338 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGN 736 GD V+V +L +D +KRI+L M+ P E + Sbjct: 339 QGDEVEVVILGIDQDKKRISLGMKQVKPNPWELVGEKYPEG 379 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 81/232 (34%), Gaps = 14/232 (6%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 L + + ++++ EN + L + + + Sbjct: 252 LGQELELKVLSFDKENQKVS--------LGLKQLVPDPWQDITERFPETSHHVGKVTNLV 303 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y V + + + L+ S K + V +I +++ + Sbjct: 304 DYGVFVELESGV----EGLVHISEMSWTRKLRHPSQMVHQGDEVEVVILGIDQDKKRISL 359 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVED 690 K + G ILEG V N+T FG F+ I DGL+H+S +S K V Sbjct: 360 GMKQVKPNPWELVGEKYPEGTILEGVVKNITEFGMFIGIEDGIDGLIHVSDISWTKKVRH 419 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQN 741 P+ + K GD V+ KVL VD + ++ L ++ L E P + Sbjct: 420 PNELFKVGDTVQAKVLTVDQENEKFTLGIKQLTEDPWSNAPSVYPVGGIVKG 471 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 4/189 (2%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 L+ + + + I + + L+ S K + T Sbjct: 374 EKYPEGTILEGVVKNITEFGMFIGI----EDGIDGLIHVSDISWTKKVRHPNELFKVGDT 429 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + +++ K + G I++G +TN+T+FG FV++ Sbjct: 430 VQAKVLTVDQENEKFTLGIKQLTEDPWSNAPSVYPVGGIVKGIITNITDFGLFVEVEEGI 489 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 +GLVH+S LS+K ++ P + K G+ ++ K++ V + +R+ L+++ ++ E R Sbjct: 490 EGLVHVSELSSKKIKSPSEIYKDGEEIQAKIIHVSAEERRLGLSIKQLKEDEEHRKSREY 549 Query: 735 GNERPQNNR 743 P + + Sbjct: 550 SRTGPDSGQ 558 Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 E G D F++A DL+ G I++G + + + VD+ +G + Sbjct: 8 ENNGTDLDFNFESALEDYLSTDFGDLEEGTIVKGEIVRIDDDNVLVDVNFKSEGQIPTIE 67 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 N D + K GD + V V+ + Q I L+ Sbjct: 68 FQN---TDGNITAKVGDKIDVFVVRKNEQEGTIILS 100 >UniRef50_B8FI70 Ribosomal protein S1 n=14 Tax=Proteobacteria RepID=B8FI70_DESAA Length = 616 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 44/256 (17%), Positives = 91/256 (35%), Gaps = 18/256 (7%) Query: 502 SVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 S L V L M+ + + R + +R+ +L+ R EQ + L+ Sbjct: 183 SQVDLRPVRDLDSMVGKVFTFKVLKYNRKRSNIVLSRRVILEKERE-----EQRSSTLQN 237 Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 H ++ + Y V + + + ++ T+T Sbjct: 238 IHEGKVVEGVVKNITEYGVFVDLGGIDGLLHITDISWG------RVKHPSELFGVGQTIT 291 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 + +L+ K + + G + G V ++T++GAFV++ +G Sbjct: 292 VKVLDLDLERERVSLGMKQLKEDPWTTASDRYPVGERVSGKVVSLTDYGAFVELEEGIEG 351 Query: 677 LVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGG 734 L+H+S +S + P VV GD ++ VL++ +R++L M+ P + + Sbjct: 352 LIHVSEMSWTRKIRHPSKVVSVGDDLEAVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYP 411 Query: 735 GNERPQNNRPAAKPRG 750 + G Sbjct: 412 IGTTIEGRIKNITDFG 427 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 42/196 (21%), Positives = 71/196 (36%), Gaps = 6/196 (3%) Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 + V Y + + L+ S K + + Sbjct: 323 YPVGERVSGKVVSLTDYGAFVELEEGI----EGLIHVSEMSWTRKIRHPSKVVSVGDDLE 378 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 ++ +++ R K G +EG + N+T+FG F+ I DG Sbjct: 379 AVVLDIKPSNRRVSLGMKQVAPNPWDVIGEKYPIGTTIEGRIKNITDFGMFIGIDEGIDG 438 Query: 677 LVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGG 734 LVHIS +S K + P V K GD V+ VL +D + +R +L ++ L+ P ET + R Sbjct: 439 LVHISDISWTKRINHPGDVYKKGDEVRAIVLHIDRENERFSLGIKQLEPDPWETISERYQ 498 Query: 735 GNERPQNNRPAAKPRG 750 + + G Sbjct: 499 VGTKVNGLITSVTDFG 514 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 80/196 (40%), Gaps = 8/196 (4%) Query: 563 LDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL 622 ++ + + + I L+ S + + D V I+ + Sbjct: 416 IEGRIKNITDFGMFIGIDEGI----DGLVHISDISWTKRINHPGDVYKKGDEVRAIVLHI 471 Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 ++ K + Q G + G +T+VT+FG FV++ +GLVH+S Sbjct: 472 DRENERFSLGIKQLEPDPWETISERYQVGTKVNGLITSVTDFGIFVELEEGIEGLVHVSE 531 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 ++ + V+ P GD V+ V+ ++ + +RI L+++ E + + G NE +N Sbjct: 532 VAKEKVKTPVGQFNVGDTVETVVVNINPKERRIGLSIKRL----EEDEQEGYFNEYMASN 587 Query: 743 RPAAKPRGREAQPAGN 758 +PA+ G Q A Sbjct: 588 KPASSALGEAFQRAAK 603 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 7/73 (9%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL--SNKFVEDPHTVVKAGD 699 E+ + G ++ G + + VDIG +GL+ I + V + GD Sbjct: 62 EESFKRFEEGEVVTGKIIQIDKDYVLVDIGYKSEGLIPIREFIEPDGTVAA-----EIGD 116 Query: 700 IVKVKVLEVDLQR 712 V+V V +D + Sbjct: 117 EVEVMVERLDSED 129 Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 47/137 (34%), Gaps = 5/137 (3%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQF-ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V +++ L+ + A E + I+EG +T+ G VDI Sbjct: 118 VEVMVERLDSEDEGVMVSKEKASKIKVWEEIKVAYEEEGIVEGTITHRVKGGFSVDI--G 175 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 + S + + V D ++ G + KVL+ + +R I L+ R+ + R Sbjct: 176 VPAFLPGSQVDLRPVRDLDSM--VGKVFTFKVLKYNRKRSNIVLSRRVILEKEREEQRSS 233 Query: 734 GGNERPQNNRPAAKPRG 750 + + Sbjct: 234 TLQNIHEGKVVEGVVKN 250 >UniRef50_C6BYI5 RNA binding S1 domain protein n=4 Tax=Desulfovibrionales RepID=C6BYI5_DESAD Length = 503 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 48/237 (20%), Positives = 83/237 (35%), Gaps = 12/237 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 Q I + +R+ LL+ + + F++ D ++ + Sbjct: 163 QVIKFEENGRNIVVSRRVLLEQEQEKAR-----EAFMQDVQPDAVMEGKVTKLMPFGAFV 217 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR--DPRPEFKT 635 + + + + S R+ K D +V + E K G+ K Sbjct: 218 ELTPGVEGMVH--ISELSWSRSAKPEDVVQPG-DEVSVRILSMEPRKDGKGLKIGLSLKQ 274 Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTV 694 Q E + + G + G V +FGAFV+I +GLVH+S +S K V P Sbjct: 275 LQADPWDEIGDKFKAGDKVTGTVVRCADFGAFVEIAPGIEGLVHVSEMSYTKRVHKPEDE 334 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 V G V V V ++D ++RI L+M+ P + + G Sbjct: 335 VSPGQEVAVMVKDIDPVKRRIGLSMKDAAGDPWMDMEDTFKVGQEVEGTVENRAEFG 391 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 9/152 (5%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFK----TAQFADGVETMNDLQPGMILEGAVTNVTN 663 E F T + + E+ GR+ + Q M D+QP ++EG VT + Sbjct: 153 EAFVGSTHNFQVIKFEENGRNIVVSRRVLLEQEQEKAREAFMQDVQPDAVMEGKVTKLMP 212 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK----RIALTM 719 FGAFV++ +G+VHIS LS P VV+ GD V V++L ++ ++ +I L++ Sbjct: 213 FGAFVELTPGVEGMVHISELSWSRSAKPEDVVQPGDEVSVRILSMEPRKDGKGLKIGLSL 272 Query: 720 RLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 + + P + + ++ G Sbjct: 273 KQLQADPWDEIGDKFKAGDKVTGTVVRCADFG 304 Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 10/224 (4%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + + + V + I + L+ S + DE Sbjct: 285 DKFKAGDKVTGTVVRCADFGAFVEIAPGI----EGLVHVSEMSYTKRVHKPEDEVSPGQE 340 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V ++K+++ R K A ++ + + G +EG V N FG F+++ Sbjct: 341 VAVMVKDIDPVKRRIGLSMKDAAGDPWMDMEDTFKVGQEVEGTVENRAEFGIFINLAPGI 400 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM----RLD-EQPGETN 729 GL+ +S ++ + +K GD VK+ + E++ +++ LT + D + + Sbjct: 401 TGLLPMSRITRSGKQAELEALKPGDKVKISIEEINTTDRKVTLTAGEAQKADGDNDWKEY 460 Query: 730 ARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 + P+ + P + D L AM K+ Sbjct: 461 TKSAPKKSAPRKSAPKTS-STSGGTGGFGGLLGDKLQEAMKNKK 503 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 E+ ++LQ G ++G V ++T FVD G DG+V L++ E+ VK GD V+ Sbjct: 24 ESNDNLQVGDQIKGTVISITKDSVFVDTGSKVDGVVDRDELTD---EEGELTVKDGDTVE 80 Query: 703 VKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + V+ ++ I L+ + G R N+ P + A +G Sbjct: 81 LYVISMN--NNEIVLSKAMSGAGGLNMLREAYENKVPVEGKVAETCKG 126 >UniRef50_Q6NDP1 30S ribosomal protein S1 n=165 Tax=Proteobacteria RepID=RS1_RHOPA Length = 565 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 83/235 (35%), Gaps = 13/235 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 Q + R +R+ +L+ +R EQ ++ +D + Y Sbjct: 164 QILKMDRRRGNIVVSRRTVLEETR-----AEQRQELVQNLEEGQVIDGVVKNITDYGAFV 218 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + +++ + + T+ TV I ++ K Sbjct: 219 DLGGIDG------LLHVTDIAWRRVNHPTEVLTIGQTVKVKIIKINHETHRISLGMKQLL 272 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE-DPHTVVK 696 G VTN+T++GAFV++ +GL+H+S +S P +V Sbjct: 273 DDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNMHPGKIVS 332 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 V+V+VLEVD ++RI+L ++ P E + + G Sbjct: 333 TSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVEKHPVGSTVEGEVKNKTEFG 387 Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats. Identities = 55/245 (22%), Positives = 85/245 (34%), Gaps = 20/245 (8%) Query: 495 GVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAG 552 GV N + G+ ++ +AWR N Q +KV + Sbjct: 206 GVVKNITDYGAFVDLGGIDGLLHVTDIAWRRVNHPTEVLTIGQTVKVKIIK----INHET 261 Query: 553 FLRINHGDNPLDASTVHPEA-YPVVERI------------LAATQQALKDLMGNSSELRN 599 LD EA YP+ R + ++ L+ S Sbjct: 262 HRISLGMKQLLDDPWQGIEAKYPLNARFTGRVTNITDYGAFVELEPGIEGLIHVSEMSWT 321 Query: 600 LKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVT 659 K V + E++ R K + G +EG V Sbjct: 322 KKNMHPGKIVSTSQEVEVQVLEVDSVKRRISLGLKQTMRNPWEVFVEKHPVGSTVEGEVK 381 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNK-FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 N T FG F+ + DG+VH+S L K E K GD+VK VL+VD++++RI+L Sbjct: 382 NKTEFGLFLGLDGDVDGMVHLSDLDWKLPGEQVIDNFKKGDMVKAVVLDVDVEKERISLG 441 Query: 719 MRLDE 723 ++ E Sbjct: 442 VKQLE 446 Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 62/179 (34%), Gaps = 6/179 (3%) Query: 553 FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 F+ + + ++ + + + + ++ S L D Sbjct: 366 FVEKHPVGSTVEGEVKNKTEFGLFLGLDGDV----DGMVHLSDLDWKLPGEQVIDNFKKG 421 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-G 671 V ++ +++ K + E D++ G ++ V +V G V I G Sbjct: 422 DMVKAVVLDVDVEKERISLGVKQLEGDPFAE-PGDVKKGAVVTCEVLDVKESGIDVQIVG 480 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNA 730 + + S L+ + G+ V +V++ D + +++ ++++ E E A Sbjct: 481 TDFNTFIKRSELARDRNDQRSDRFAVGEKVDARVIQFDKKARKVQVSIKALEVAEEKEA 539 >UniRef50_B2S2M7 Ribosomal protein S1 n=5 Tax=Bacteria RepID=B2S2M7_TREPS Length = 863 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 51/309 (16%), Positives = 111/309 (35%), Gaps = 20/309 (6%) Query: 434 PDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNA 493 P+L + + + +L+D + ++ + + + + + A + + + Sbjct: 376 PELSKTKADRLGLKVKLRDAERDGTPVEGRIVRLTEKKSGFEVDLGAGMMAFLPISQSDC 435 Query: 494 VGVDLNTASVPLLT--RVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCA 551 VD + + L + + +++ R + NR+ L +A + Sbjct: 436 QKVDAPESLIGLTSKFYIERISQSK-----QHRGNDNIVINRR-----RYLEERARQARE 485 Query: 552 GFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFG 611 F H ++ + ++ + + M + + Sbjct: 486 EFFNSVHIEDSVSGVVKSFTSFGAFIDLGGFDGLLHVNDMSWG------HVARPREFVKK 539 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 T+ + L++ + K Q +E N +++G VT + +FGAF+++ Sbjct: 540 GQTIELKVIRLDQAEKRINLSLKHFQPDPWLEFENKFGVNDVVKGRVTKIADFGAFIELA 599 Query: 672 VHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETN 729 +GL HIS S K P +VK GD V+ +L D+Q R++L ++ P E Sbjct: 600 EGIEGLAHISEFSWVKKTSKPSDMVKIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEI 659 Query: 730 ARRGGGNER 738 R R Sbjct: 660 EARYPVGAR 668 Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 6/203 (2%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 F ++ + + + + L S K S +D Sbjct: 569 WLEFENKFGVNDVVKGRVTKIADFGAFIELAEGI----EGLAHISEFSWVKKTSKPSDMV 624 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V +I + K E G + VTN GAF++ Sbjct: 625 KIGDEVECMILGYDIQAGRVSLGLKQVTANPWEEIEARYPVGARFTRRIVKVTNAGAFIE 684 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTV-VKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGE 727 + DG +H+ LS P ++ G ++ V+E D Q +RI L ++ L + P + Sbjct: 685 MEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVIECDPQARRIRLGVKQLSDNPWQ 744 Query: 728 TNARRGGGNERPQNNRPAAKPRG 750 A G + + G Sbjct: 745 VFANAYGVGSTVEGEVSSVTDFG 767 Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 16/192 (8%) Query: 583 TQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV 642 ++ + + + E + ++ E + R R K Sbjct: 685 MEEGIDGFLHVDDLSWVKRTRPADHELEVGKEIECMVIECDPQARRIRLGVKQLSDNPWQ 744 Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK---AGD 699 N G +EG V++VT+FG FV + +GLV L DP ++ GD Sbjct: 745 VFANAYGVGSTVEGEVSSVTDFGIFVRVPGGVEGLVRKQHLVENRDGDPGEALRKYAVGD 804 Query: 700 IVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNS 759 VK +++++++ +++A ++R +R + +R + PRG + G+ Sbjct: 805 RVKAVIVDMNVKDRKVAFSVR----------DYQRKVQRDELSRYMSAPRGEDE---GSF 851 Query: 760 AMMDALAAAMGK 771 + D + GK Sbjct: 852 TLGDLMRQTSGK 863 >UniRef50_B6AR90 Ribosomal protein S1 n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6AR90_9BACT Length = 591 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 85/242 (35%), Gaps = 14/242 (5%) Query: 512 LTRMMAQNIVAWRDENG-QFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + + I+ + G +R+ LL+ R K + L+ + Sbjct: 172 IGQTIQVRIIKMNKKRGNIIVSRRVLLEEWRDRRKKVT-----MDALKEGEILEGIVKNI 226 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 Y + M + ++ + V ++ + +K Sbjct: 227 TDYGAFIDLGGIDGLLHITDMSWG------RVTNPQEFMNVGDKVNVVVLKHDKETGRVS 280 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VE 689 K G + V ++T++GAF++I +GL+H++ +S V+ Sbjct: 281 LGLKQLTPDPWTTVGTRYPEGTRVNARVVSITDYGAFLEIEPGIEGLMHVTEMSWNHEVK 340 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGETNARRGGGNERPQNNRPAAKP 748 P ++ GD ++V+VL++D + ++I+L ++ P + + + Sbjct: 341 HPSKIMSVGDTIEVQVLKIDEKNRKISLGLKQLGPNPWDDVETKYPVGAVVSGKIKSLTD 400 Query: 749 RG 750 G Sbjct: 401 FG 402 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 6/175 (3%) Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 ++A V Y I + LM + N + + T+ Sbjct: 298 YPEGTRVNARVVSITDYGAFLEIEPGI----EGLMHVTEMSWNHEVKHPSKIMSVGDTIE 353 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 + ++++ R K + G ++ G + ++T+FGAFV + DG Sbjct: 354 VQVLKIDEKNRKISLGLKQLGPNPWDDVETKYPVGAVVSGKIKSLTDFGAFVGLDEGIDG 413 Query: 677 LVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETN 729 L+HIS +S K V P V K G V+V VL+++ +R+R++L + E P +++ Sbjct: 414 LIHISDMSWTKHVRHPSEVFKKGQKVEVVVLKIEKERQRLSLGFKQVSEDPWDSD 468 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 23/269 (8%) Query: 492 NAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQ------LLKVSRLGPK 545 N V VD+ S +++ + + Q + + + R+ L K K Sbjct: 60 NEVVVDIGYKSEGHISK-SEFSEEEIQALKVDDIIHVYLEEREDVNGNLVLSKEKADRMK 118 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 ++ + + ++ + RI + +L+ Sbjct: 119 VWDAIEE---QFNRSDVIEGRIIS--------RIKGGMTVDVGLKAFLPGSQIDLRPVRD 167 Query: 606 TDEKFGVPTVTDIIKELEKPGRDP---RPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 D G IIK +K G R + + TM+ L+ G ILEG V N+T Sbjct: 168 MDRLIGQTIQVRIIKMNKKRGNIIVSRRVLLEEWRDRRKKVTMDALKEGEILEGIVKNIT 227 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-L 721 ++GAF+D+G DGL+HI+ +S V +P + GD V V VL+ D + R++L ++ L Sbjct: 228 DYGAFIDLG-GIDGLLHITDMSWGRVTNPQEFMNVGDKVNVVVLKHDKETGRVSLGLKQL 286 Query: 722 DEQPGETNARRGGGNERPQNNRPAAKPRG 750 P T R R + G Sbjct: 287 TPDPWTTVGTRYPEGTRVNARVVSITDYG 315 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 10/239 (4%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +NR+ L + +LGP ++ + + + + L Sbjct: 362 KNRKISLGLKQLGPNPWDDVETKYPVGA---VVSGKIKSLTDFGAFVGLDEGI----DGL 414 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-ETMNDLQ 649 + S ++ V ++ ++EK + FK + + Sbjct: 415 IHISDMSWTKHVRHPSEVFKKGQKVEVVVLKIEKERQRLSLGFKQVSEDPWDSDIPSRFP 474 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G L+G VT V +FG FV++ +GLVH+S + + + V + G + V+V+++D Sbjct: 475 VGSFLDGVVTKVMDFGFFVELAEGIEGLVHVSEVDLESGQRLDQVYQPGMSLPVRVIKLD 534 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAA 768 ++I L+M+ N +P + + A+ G + A Sbjct: 535 PAERKIGLSMKAV-SADSPLEAAPAVNAQPAPGNAMEEAL-KSARKKGKKSTESPEENA 591 Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 8/119 (6%) Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV 694 +T+ +L G ++EG V + VDIG +G + S S + + Sbjct: 31 EEMDRLYADTLRNLDEGSVVEGRVIEIYPNEVVVDIGYKSEGHISKSEFSEEEI----QA 86 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMRLDEQP---GETNARRGGGNERPQNNRPAAKPRG 750 +K DI+ V + E + + L+ + + + ++ + + G Sbjct: 87 LKVDDIIHVYLEEREDVNGNLVLS-KEKADRMKVWDAIEEQFNRSDVIEGRIISRIKGG 144 >UniRef50_D2L2R4 RNA binding S1 domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L2R4_9DELT Length = 507 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 51/229 (22%), Positives = 86/229 (37%), Gaps = 9/229 (3%) Query: 524 RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAAT 583 RD +R++L + R E FL + + + A A+ + Sbjct: 172 RDGKNIVVSRRKLQEQER-----AESELRFLESVNPGDVIPAVVTRFAAFGAFVEVAPGL 226 Query: 584 QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 + + + S R KA D D V +K K A Sbjct: 227 EGLVH--LSELSWSRAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIKQAGPDPWDT 284 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVK 702 G +EG VT + +FGAFV+I +GL+H+S +S+ + + P VV G+ V Sbjct: 285 VGEKFAAGDRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVRRIAKPSDVVSPGETVT 344 Query: 703 VKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 V V +VDL ++RI+L+++ P + + + G Sbjct: 345 VAVKDVDLSKRRISLSLKEVAGDPWAAVSDTFAIGSTVEGTVENRQQYG 393 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 8/151 (5%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTN 663 E T T +I E+ G++ + Q + E + + PG ++ VT Sbjct: 156 EVHVGQTYTFLITTFERDGKNIVVSRRKLQEQERAESELRFLESVNPGDVIPAVVTRFAA 215 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIALTMR 720 FGAFV++ +GLVH+S LS E V G V VKVL D +K RI+L+++ Sbjct: 216 FGAFVEVAPGLEGLVHLSELSWSRAEKAEDAVDLGQAVTVKVLSFDRDKKGRPRISLSIK 275 Query: 721 LD-EQPGETNARRGGGNERPQNNRPAAKPRG 750 P +T + +R + G Sbjct: 276 QAGPDPWDTVGEKFAAGDRVEGKVTRLADFG 306 Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 82/224 (36%), Gaps = 9/224 (4%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + ++ + I + + + + + +D T Sbjct: 287 EKFAAGDRVEGKVTRLADFGAFVEIAPGIEGLIHVSEMSHVR----RIAKPSDVVSPGET 342 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 VT +K+++ R K + G +EG V N +G F+++ Sbjct: 343 VTVAVKDVDLSKRRISLSLKEVAGDPWAAVSDTFAIGSTVEGTVENRQQYGLFINLAPGV 402 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 GL+ S L + P+ V +GD V V V E+D +++++ L + E RG Sbjct: 403 TGLLPASKLRDALEPAPYEKVSSGDTVSVVVSEIDTEKRKMTLAPVGGTKEREFTRDRGE 462 Query: 735 GNERPQNNRPAAKPRGREAQPAGNS-----AMMDALAAAMGKKR 773 +R ++N + +E Q A S + + L A+ +K+ Sbjct: 463 YRDRDRDNNDWKQYAKKEKQTAQASGGGLGLLGEKLQEALSRKK 506 >UniRef50_B8CWY2 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Halothermothrix orenii H 168 RepID=B8CWY2_HALOH Length = 678 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 86/228 (37%), Gaps = 11/228 (4%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I RD+N + +++L+ R +Q L + + Sbjct: 442 KVIEVERDKNNVVLSAKKVLEEERE-----KQKEKTLEELQEGQVVKGKVTKIVDFGAFV 496 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + M + ++ + + + K K Sbjct: 497 DLGGIEGLLHISEMSWG------RIEHPSEVLEEGQEIEVKVLAVNKEEERISLGLKQLL 550 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 E G ++ G +T + +FGAF++I +GL+HIS LS++ V+ P VV Sbjct: 551 PDPWEEFAKKHYEGEVVSGTITKIVDFGAFMEIENGIEGLIHISQLSHRHVKTPDEVVSV 610 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPA 745 G+ +K +++ +D ++KR+ L+++ E+ ET + + P + Sbjct: 611 GEEIKAEIINIDPEQKRVGLSIKALEEQPETPKKVEAPKKEPTRENES 658 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 6/146 (4%) Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFG 665 + T+ + E+E+ + K + + T+ +LQ G +++G VT + +FG Sbjct: 434 YVGKTLRLKVIEVERDKNNVVLSAKKVLEEEREKQKEKTLEELQEGQVVKGKVTKIVDFG 493 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQ 724 AFVD+G +GL+HIS +S +E P V++ G ++VKVL V+ + +RI+L ++ L Sbjct: 494 AFVDLG-GIEGLLHISEMSWGRIEHPSEVLEEGQEIEVKVLAVNKEEERISLGLKQLLPD 552 Query: 725 PGETNARRGGGNERPQNNRPAAKPRG 750 P E A++ E G Sbjct: 553 PWEEFAKKHYEGEVVSGTITKIVDFG 578 Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 73/183 (39%), Gaps = 8/183 (4%) Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL------EKPGRDP 629 ++ + + + L ++EK +I + + E P + Sbjct: 225 FRQLKSYNKIGITAGASTPDWLIKEVIEAMSEEKRDAELQEEIQEGVNTDNTPETPNGEE 284 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 P +F DL+ G ++G V + + G +VD+G +GL+ + LS++ E Sbjct: 285 NPIENEEEFNYDDNNPADLKKGQQVKGKVVEIGDNGVYVDVGYKTEGLIPLRELSHRDFE 344 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--QPGETNARRGGGNERPQNNRPAAK 747 DPH +V+ G+ + V VL ++ + + L+ + + + E + +E + Sbjct: 345 DPHEIVEEGEEIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVTREV 404 Query: 748 PRG 750 G Sbjct: 405 KGG 407 Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 5/148 (3%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD-GVETMNDLQPGMILEGAVT 659 D + + I+ LE + K A F + + I+E VT Sbjct: 342 DFEDPHEIVEEGEEIDVIVLTLEDEEGNMVLSKKRADFEKAWERILKAYENDEIIEAEVT 401 Query: 660 NVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 G VDI G VH S ++ +VED G +++KV+EV+ + + L+ Sbjct: 402 REVKGGLVVDI--GLRGFVHASHVAIGYVEDLSDY--VGKTLRLKVIEVERDKNNVVLSA 457 Query: 720 RLDEQPGETNARRGGGNERPQNNRPAAK 747 + + + E + K Sbjct: 458 KKVLEEEREKQKEKTLEELQEGQVVKGK 485 >UniRef50_D2R4L6 Ribosomal protein S1 n=7 Tax=Planctomycetales RepID=D2R4L6_9PLAN Length = 600 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 97/261 (37%), Gaps = 19/261 (7%) Query: 491 VNAVGVDL-NTASVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLGP 544 V+ GV++ AS + R A + + + + +R+ L++ R Sbjct: 149 VDIEGVNVFLPASQVDIRRPADIGDYIGRTVQCEVLKIDEARRNIVVSRRSLIERQREED 208 Query: 545 KAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASD 604 + L+ + + + + + +++ + Sbjct: 209 R-----EALLKELEIGQVRKGVVKNIAEFGAFVDLGGIDG------LLHITDMSWERIGH 257 Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 ++ + ++ +++ + K + + G +++G+V NV ++ Sbjct: 258 PSEMVAIDQEIEVMVLHIDREKKKIALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSY 317 Query: 665 GAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-D 722 GAFV + +GLVHIS +S + V P +V GD + V +L VD ++++L M+ Sbjct: 318 GAFVKLEPGIEGLVHISEMSWTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQ 377 Query: 723 EQPGETNARRGGGNERPQNNR 743 E P A + + + Sbjct: 378 ENPWTRVAEKYPVDTIVEGKV 398 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 17/272 (6%) Query: 471 QHDVSQTQLARKLD-----AVVEDCVNAVGVDLNTASVPLLTRVAGLT-RMMAQ--NIVA 522 Q + + L ++L+ V + G ++ + L + ++ + +VA Sbjct: 204 QREEDREALLKELEIGQVRKGVVKNIAEFGAFVDLGGIDGLLHITDMSWERIGHPSEMVA 263 Query: 523 WRDENGQFQ---NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI 579 E +R++ L K A + S V+ +Y ++ Sbjct: 264 IDQEIEVMVLHIDREKKKIALGLKQKEGNPWADVDTKYPVGTVVKGSVVNVMSYGAFVKL 323 Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 + L+ S + + ++ ++ +I ++K G+ K Q Sbjct: 324 EPGI----EGLVHISEMSWTRRVNHPSELVNIGDEISVVILGVDKDGQQLSLGMKQTQEN 379 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAG 698 I+EG V N+TN+GAFV++ DGL+H+S +S + P +++ G Sbjct: 380 PWTRVAEKYPVDTIVEGKVRNLTNYGAFVELEEGIDGLLHVSDMSWTRKISHPSEMLEKG 439 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGETN 729 V+ K+L VD +R+RIAL ++ LDE P + Sbjct: 440 QPVRCKILSVDQERRRIALGLKQLDEDPWARD 471 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 5/170 (2%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 D ++ + Y + L+ S K S ++ Sbjct: 386 EKYPVDTIVEGKVRNLTNYGAFVELEEGI----DGLLHVSDMSWTRKISHPSEMLEKGQP 441 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGV-ETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 V I +++ R K + QPG ++ GAVT +TNFG FV + Sbjct: 442 VRCKILSVDQERRRIALGLKQLDEDPWARDIPGKYQPGQVVSGAVTKITNFGVFVGLEDG 501 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +GL+HIS L++ VE+P VVK GD + VK+L VD+ ++I L+ + E Sbjct: 502 LEGLLHISELADHKVENPEDVVKVGDKIDVKILRVDIDERKIGLSRKRVE 551 Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 54/174 (31%), Gaps = 4/174 (2%) Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTD-EKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 +L + + + + + + D E G + K Sbjct: 58 MVLVDIGFKSEGSIPLDEWEEGEEPPQVGQLVRVLIEDLEDETAAPEDGGMVRISKRKAK 117 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 + E M+ ++ G ++ G V+ G VDI + + S + + D Sbjct: 118 KLDAWKEMMDRIKEGQVVTGTVSRKIKGGLLVDIE-GVNVFLPASQVDIRRPADIGDY-- 174 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 G V+ +VL++D R+ I ++ R + R E + Sbjct: 175 IGRTVQCEVLKIDEARRNIVVSRRSLIERQREEDREALLKELEIGQVRKGVVKN 228 >UniRef50_Q027A8 SSU ribosomal protein S1P n=2 Tax=Acidobacteria RepID=Q027A8_SOLUE Length = 572 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 51/258 (19%), Positives = 95/258 (36%), Gaps = 13/258 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I + +R+ +L+ K + + Y Sbjct: 177 RIIKLDVADEDLVVDRRAVLEEEERASK-----EQRYSQVKEGEIVHGTIRSLTDYGAFV 231 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 I D + + +++ + + D V I +++ + K Q Sbjct: 232 DI------GGVDALLHVADISWGRVNKPADVLNVGDKVEAKILKVDPAKKRISLGLKQLQ 285 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + + G + G+VT VT+FGAFV++ +GLVH+S +S K + P +VK Sbjct: 286 PHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLVHLSEMSWSKKIRRPADMVK 345 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP 755 GD V+V VL V+ +RI+L ++ P A++ + + + G Q Sbjct: 346 PGDQVEVVVLGVNAADRRISLGLKQALGDPWADAAQKLAVGTVIEGPVTSIQKFGAFVQV 405 Query: 756 AGNSAMMDALAAAMGKKR 773 A M + +KR Sbjct: 406 AEGVEGMVHVGDISAEKR 423 Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 88/251 (35%), Gaps = 13/251 (5%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + + I+ + L + +L P ++ A + S Sbjct: 259 VGDKVEAKILKVDPAKKRIS-----LGLKQLQPHPWDLVAD---KYKVGERVTGSVTRVT 310 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + + ++ ++ L+ S + K D V ++ + R Sbjct: 311 DFGAFVEL----EKGIEGLVHLSEMSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISL 366 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS-NKFVED 690 K A + L G ++EG VT++ FGAFV + +G+VH+ +S K + Sbjct: 367 GLKQALGDPWADAAQKLAVGTVIEGPVTSIQKFGAFVQVAEGVEGMVHVGDISAEKRINH 426 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 P VVK G +VK +VLE+D++++R+ L M+ R G Sbjct: 427 PQDVVKVGQVVKAQVLELDVEKRRLRLGMKQLIPTSLDEYIAEHKEGDVVTGRMTDVSSG 486 Query: 751 REAQPAGNSAM 761 R G Sbjct: 487 RAKVELGEGVH 497 Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 25/238 (10%), Positives = 67/238 (28%), Gaps = 19/238 (7%) Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DP + + + K + + + ++ ++ V + + L ++ Sbjct: 271 DPAKKRISLGLKQLQPHPWDLVADKYKVGERVTGSVTRVTDFGAFVELEKGIEGLVHLSE 330 Query: 512 LTRMM-----------AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 ++ + R L LG A + Sbjct: 331 MSWSKKIRRPADMVKPGDQVEVVVLGVNAADRRISLGLKQALGDP----WADAAQKLAVG 386 Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 ++ + + ++ + ++ + + D V + Sbjct: 387 TVIEGPVTSIQKFGAFVQVAEGV----EGMVHVGDISAEKRINHPQDVVKVGQVVKAQVL 442 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 EL+ R R K E + + + G ++ G +T+V++ A V++G Sbjct: 443 ELDVEKRRLRLGMKQLIPTSLDEYIAEHKEGDVVTGRMTDVSSGRAKVELGEGVHATC 500 >UniRef50_A8F7S1 RNA binding S1 domain protein n=1 Tax=Thermotoga lettingae TMO RepID=A8F7S1_THELT Length = 539 Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 43/255 (16%), Positives = 87/255 (34%), Gaps = 21/255 (8%) Query: 502 SVPLLTRVAGLTRMMAQNIVA----WRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 S LL R ++ R++ +R+ LL+ F + Sbjct: 136 SQSLLKRNQSFQEKEMNFLIIEYSVRRNKLHIVVSRKALLERL---------KKEFFNTH 186 Query: 558 HGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 + ++ + + + M + + D+ + Sbjct: 187 KVGDEIEGTVESIRMNHAIIDFDGIKAFLPRSEMSHDPSVSPDDILKKNDQ------IKV 240 Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 I E+ K + ++ G +++G V ++ FG F+++ DGL Sbjct: 241 KIIEINPARSSITVSLKALEPDPWLKVSERYSVGTVVQGTVKSIMPFGIFLNLEPGLDGL 300 Query: 678 VHISSLSNKFVE-DPHTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGGG 735 +HIS + + D H K G IV+ +V+E+D ++ RIAL+ + P E ++ Sbjct: 301 IHISEVFWTSKKADLHKYFKIGQIVQAEVIEIDPEKHRIALSYKKAKGDPWEEVVQKYNE 360 Query: 736 NERPQNNRPAAKPRG 750 + P G Sbjct: 361 GDVVSGKIVRILPAG 375 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 67/186 (36%), Gaps = 5/186 (2%) Query: 562 PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKE 621 + + + + + L+ S K +D V + E Sbjct: 276 VVQGTVKSIMPFGIFLNLEPGL----DGLIHISEVFWTSKKADLHKYFKIGQIVQAEVIE 331 Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++ +K A+ E + G ++ G + + G V++ G V S Sbjct: 332 IDPEKHRIALSYKKAKGDPWEEVVQKYNEGDVVSGKIVRILPAGVIVELEDGVSGFVPKS 391 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQ 740 LS V+DP + K D + VK+L +D Q++R+ L+++ L P + + N + Sbjct: 392 ELSWNKVKDPTDLFKEKDRLNVKILSIDKQKRRMRLSVKQLTPDPWDEVVTKLSENSVAK 451 Query: 741 NNRPAA 746 + Sbjct: 452 ALVKSK 457 Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 33/194 (17%), Positives = 65/194 (33%), Gaps = 14/194 (7%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 ++ + + + V V+ + + SEL K D TD Sbjct: 351 WEEVVQKYNEGDVVSGKIVRILPAGVIVELEDGVSGFV-----PKSELSWNKVKDPTDLF 405 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 + I ++K R R K E + L + + V + N G ++ Sbjct: 406 KEKDRLNVKILSIDKQKRRMRLSVKQLTPDPWDEVVTKLSENSVAKALVKSKVNSGFIIE 465 Query: 670 I-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 + DGL+ S +K GD V+V VL + +R+++ ++ + E+ Sbjct: 466 LKDFSIDGLMPAS--------HADESLKEGDEVEVLVLRLIPERRKLLVSQKKLEEKKAY 517 Query: 729 NARRGGGNERPQNN 742 + +E Sbjct: 518 EEYKSKIDESTVKR 531 Score = 44.3 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Query: 647 DLQPGMILEGAVTNVTNF-GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + PG ++E VT + G VD G +G++ + L G +K ++ Sbjct: 19 ETNPGSVVEAVVTRINPAEGISVDFGGKGEGIIQQNEL-----IHSIEKYSVGQKIKAQI 73 Query: 706 LEVDLQRKRIALTMR 720 L+++ + L+ + Sbjct: 74 LKINDEEGYALLSEK 88 >UniRef50_UPI0001C3232B RNA binding S1 domain protein n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3232B Length = 529 Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 56/228 (24%), Positives = 99/228 (43%), Gaps = 16/228 (7%) Query: 501 ASVPLLTRVAGLTRMMAQNIV-----AWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS+ + RV L + Q I R N +R+ +L+ R E L Sbjct: 155 ASLVDIRRVPHLDEYLGQTIECRVIELNRSRNNVVLSRRAVLEEQRR-----EDRERILD 209 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 ++ + + + + + + SEL + ++ TV Sbjct: 210 RLQPGMIVEGTISNIVDFGAFVDLDGIDG------LIHISELSWSHVNHPSEILSIGDTV 263 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 + + ++++ + K Q ++ G LEG VT V FGAFV+I + Sbjct: 264 SVKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKVVTFGAFVEILDGVE 323 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 GLVHIS L+ VE+P +++ D VKVK+LE+D +R+R++L+++ E Sbjct: 324 GLVHISELAQHHVENPREIIQPNDEVKVKILEIDSERRRLSLSIKRVE 371 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 22/244 (9%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + + ++ D++G+ L K KA+ + P+D + + Sbjct: 87 MGEEVDALVLTKEDQDGRLI----LSKKRARFEKAWRRIEA---AAESGEPVDGTVIEV- 138 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 V ++ R ++ + T+ + EL + + Sbjct: 139 ---VKGGLIIDLGVRGFLPASLVDIRRVPHLDEYLGQ-----TIECRVIELNRSRNNVVL 190 Query: 632 EFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 + E ++ LQPGMI+EG ++N+ +FGAFVD+ DGL+HIS LS Sbjct: 191 SRRAVLEEQRREDRERILDRLQPGMIVEGTISNIVDFGAFVDLD-GIDGLIHISELSWSH 249 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQNNRPAA 746 V P ++ GD V VKVL++D R+RI+L ++ E P + + + Sbjct: 250 VNHPSEILSIGDTVSVKVLDIDRDRQRISLGLKQTQEDPWQRVVDTYNVGDELEGRVTKV 309 Query: 747 KPRG 750 G Sbjct: 310 VTFG 313 Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 21/181 (11%), Positives = 59/181 (32%), Gaps = 8/181 (4%) Query: 541 RLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNL 600 + + L + + V + + +L + ++ ++ Sbjct: 22 EIDGQIVPNYDATLTPFEEGDVVTGHVVRIDK----DEVLVDIGYKSEGVIPSNELSIRK 77 Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 + + G ++ + ++ GR + + + G ++G V Sbjct: 78 SVDPKDEVEMGEEVDALVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIE 137 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V G +D+ G + S + + V + G ++ +V+E++ R + L+ R Sbjct: 138 VVKGGLIIDL--GVRGFLPASLVDIRRVPHLDEYL--GQTIECRVIELNRSRNNVVLSRR 193 Query: 721 L 721 Sbjct: 194 A 194 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 2/109 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKV 703 T+ + G ++ G V + VDIG +G++ + LS + DP V+ G+ V Sbjct: 34 TLTPFEEGDVVTGHVVRIDKDEVLVDIGYKSEGVIPSNELSIRKSVDPKDEVEMGEEVDA 93 Query: 704 KVLEVDLQRKRIALTMRLD--EQPGETNARRGGGNERPQNNRPAAKPRG 750 VL + Q R+ L+ + E+ E G Sbjct: 94 LVLTKEDQDGRLILSKKRARFEKAWRRIEAAAESGEPVDGTVIEVVKGG 142 >UniRef50_C1A406 30S ribosomal protein S1 n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A406_GEMAT Length = 585 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 49/269 (18%), Positives = 93/269 (34%), Gaps = 19/269 (7%) Query: 490 CVNAVGVDL-NTASVPLLTRVAGLTRMMAQN-----IVAWRDENGQFQNRQQLLKVSRLG 543 V+ +GVD S L RV + ++ Q I + +R+ +L+ R G Sbjct: 160 VVDLMGVDAFLPGSQIALRRVPNIDELLGQKYEFKIIKLNKRRRNIVVSRRVILETERAG 219 Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 + ++ D + + + M + S Sbjct: 220 KR-----EKLMKELAKDQVRKGVVKNITDFGAFIDLGGVDGLLHITDMSWG------RIS 268 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 ++ + + +++ K Q + G + G V ++TN Sbjct: 269 HPSEMVQIGMELEIKVLDIDWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITN 328 Query: 664 FGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 +GAF+++ +GLVHIS +S V P +V G+ ++ VL+VD ++I+L M+ Sbjct: 329 YGAFIELEPGIEGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQT 388 Query: 723 E-QPGETNARRGGGNERPQNNRPAAKPRG 750 E P + R G Sbjct: 389 EQDPWVILPLKYPVGTRINGKVRNLTSFG 417 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 6/188 (3%) Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 V Y + + L+ S + + ++ ++++ Sbjct: 321 GKVVSITNYGAFIELEPGI----EGLVHISEMSWTRNVRHPSKIVSIGEAIEAVVLKVDE 376 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 K + V G + G V N+T+FGAFV+I DGL+HIS +S Sbjct: 377 TEEKISLGMKQTEQDPWVILPLKYPVGTRINGKVRNLTSFGAFVEIEPGIDGLIHISDMS 436 Query: 685 N-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 K V+ P VVK GD V V +L +D + KRI+L ++ +E P Sbjct: 437 WTKRVQHPSEVVKKGDAVDVVILNIDSENKRISLGLKQAEEDPWLRIGETYPVGTELPGK 496 Query: 743 RPAAKPRG 750 +G Sbjct: 497 VVRLMDKG 504 Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 93/301 (30%), Gaps = 15/301 (4%) Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 D E + + K + ++ ++ + ++ V N + L ++ Sbjct: 288 DWERERISLGLKQLQSYPWKDVAAKYPVGTRVSGKVVSITNYGAFIELEPGIEGLVHISE 347 Query: 512 L----TRMMAQNIVAWRDENGQFQNRQQLLKVSR-LGPKAFEQCAGFLR--INHGDNPLD 564 + IV+ + + + LG K EQ + ++ Sbjct: 348 MSWTRNVRHPSKIVSIGEAIEAVVLKVDETEEKISLGMKQTEQDPWVILPLKYPVGTRIN 407 Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 + ++ I L+ S + ++ V +I ++ Sbjct: 408 GKVRNLTSFGAFVEIEPGI----DGLIHISDMSWTKRVQHPSEVVKKGDAVDVVILNIDS 463 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL- 683 + K A+ + G L G V + + G VD+G +G V +S L Sbjct: 464 ENKRISLGLKQAEEDPWLRIGETYPVGTELPGKVVRLMDKGVVVDLGNDIEGFVPVSQLN 523 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL---TMRLDEQPGETNARRGGGNERPQ 740 V +P ++VLEVD +RI L ++ ++ P + +E Sbjct: 524 PEGTVTNPADFTYEAMNFVMRVLEVDPIHRRIVLAVTSIPEEQPPKPAEPSKVHSSEDEL 583 Query: 741 N 741 Sbjct: 584 G 584 >UniRef50_A9BGS2 RNA binding S1 domain protein n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BGS2_PETMO Length = 532 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 69/213 (32%), Gaps = 6/213 (2%) Query: 539 VSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELR 598 V + A E+ + +D + + R+ + + E Sbjct: 159 VVSIKDYAEEKISQTFNEYEEGMVIDGVVEDIKNFGAFVRLNDHLNGLIPASEVSWDEKI 218 Query: 599 NLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAV 658 ++K +K + L++ + K + G I++G V Sbjct: 219 SIKDYLKVGQKVKALIIK-----LDREKKRISLSLKRLKENPWKTVDEKYPIGSIVQGTV 273 Query: 659 TNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALT 718 T + FG V I +GLVH + + +V GD V+VK+L +D + K+I L+ Sbjct: 274 TKILPFGFTVKIDEGLEGLVHETEIFWGRKGRISDLVNVGDDVQVKILNIDKENKKINLS 333 Query: 719 MRL-DEQPGETNARRGGGNERPQNNRPAAKPRG 750 + P E + G Sbjct: 334 YKQVSGDPWENIEEKYYEGNIVTGTVEKVLDNG 366 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%) Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 K +P + K + K G++ K +T N+ + GM+++G V ++ NF Sbjct: 134 LLSPKDDLPQGEKMAKVISKNGKNIVVSIKDYAEEKISQTFNEYEEGMVIDGVVEDIKNF 193 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDE 723 GAFV + H +GL+ S +S +K G VK ++++D ++KRI+L+++ L E Sbjct: 194 GAFVRLNDHLNGLIPASEVSWDEKISIKDYLKVGQKVKALIIKLDREKKRISLSLKRLKE 253 Query: 724 QPGETNARRGGGNERPQNNRPAAKPRGREAQ 754 P +T + Q P G + Sbjct: 254 NPWKTVDEKYPIGSIVQGTVTKILPFGFTVK 284 Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 36/230 (15%), Positives = 79/230 (34%), Gaps = 15/230 (6%) Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY 573 ++ A I R++ + ++L + + + + + Sbjct: 229 KVKALIIKLDREKKRISLSLKRLKENP---------WKTVDEKYPIGSIVQGTVTKILPF 279 Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 +I + + + + + V + ++K + + Sbjct: 280 GFTVKIDEGLEGLVHETEIFWGRKGRISDLVNVGDDVQVKIL-----NIDKENKKINLSY 334 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K G I+ G V V + GA + I G +H+S LS FV+D T Sbjct: 335 KQVSGDPWENIEEKYYEGNIVTGTVEKVLDNGAIIKIDEGITGFLHVSELSWDFVDDIST 394 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPGETNARRGGGNERPQNN 742 V+ +KVK++++D KR+ L++R E P + ++ + + Sbjct: 395 VLNEKQKIKVKIIKIDKDNKRMRLSVRETKENPWKKASKEIKPGDTVKGK 444 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 15/202 (7%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + + I+ EN + L ++ +E + N + + Sbjct: 312 VGDDVQVKILNIDKENKKIN-----LSYKQVSGDPWENIEE---KYYEGNIVTGTVEKVL 363 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + +I L + + D + + I +++K + R Sbjct: 364 DNGAIIKIDEGITGFLHVSELSWDFV-----DDISTVLNEKQKIKVKIIKIDKDNKRMRL 418 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSLSNKFVED 690 + + + +++PG ++G + + GA V I + + S S + Sbjct: 419 SVRETKENPWKKASKEIKPGDTVKGKIIRFLDKGAIVLIDGYEVEAYLPASKASTNS-KS 477 Query: 691 PHTVVKAGDIVKVKVLEVDLQR 712 GD ++ KVLE+ L+ Sbjct: 478 LEETYSIGDQIEAKVLEIGLEN 499 >UniRef50_C9LMR5 Hydroxymethylbutenyl pyrophosphate reductase/ribosomal protein S1 n=1 Tax=Dialister invisus DSM 15470 RepID=C9LMR5_9FIRM Length = 658 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 16/227 (7%) Query: 502 SVPLLTRVAGLT-----RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRI 556 S L V L + A+ + +N +R+ +L+ R G + A Sbjct: 424 SQGDLRFVHSLQSLVGQKFKAKILEVDPTKNRLVLSRKAVLEEQRTGELDVIEQA----- 478 Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 L + Y + + + S++ K S D + Sbjct: 479 YENGEVLKGTVKKIMPYGAFVALNGIEG------LLHISDVSWRKISKVEDVLQPEQVID 532 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 IK ++ + K + D + I+ V + FG V++ G Sbjct: 533 VKIKSFDREKQRISFSHKDCLPNPWETAVKDHEVDDIVGARVVKILEFGVIVELEDGLTG 592 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 L+HI+ ++ + P + + GD + V+++ +D RKRI+ ++ Sbjct: 593 LLHINEMTQDHNKKPGDICRVGDDLTVRIIGIDEARKRISFSLVEAP 639 Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 1/103 (0%) Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 + E D+ G ++EG V ++T+ A++ G + ++ + S V++ GD Sbjct: 297 EQEEMNLDVHKGSVVEGKVVDLTDDKAWISFGYKTEAVLPLHEYSYPEPASLKDVLQVGD 356 Query: 700 IVKVKVLEVDLQRKRIALT-MRLDEQPGETNARRGGGNERPQN 741 ++V+V+ + I ++ +++D A+ P Sbjct: 357 SLRVQVVSSVKEDSTIFVSKIKVDRLADWDVAKEAFDKGEPVE 399 >UniRef50_C6PXA3 RNA binding S1 domain protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXA3_9CLOT Length = 388 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 6/237 (2%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS L+ V L + + + E F ++ + L K E+ + H Sbjct: 143 ASQLSLSYVEDLKSFIGKTLTVKVIE---FDKDKEKV---VLSRKVIEKAEAEEKKQHLL 196 Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 N + + + A D + + SEL + ++ D V I Sbjct: 197 NSIKPGEKRSGVVSRLAKFGAFVDLGGVDGLIHVSELSWKRVNNPADVVSVGDKVEVYIL 256 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 ++K K N + G ++EG V + +FGAFV+I +GLVHI Sbjct: 257 SVDKENNKIALALKDVNENPWESVGNKFKIGDVVEGEVLKLASFGAFVEIQPGVEGLVHI 316 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 S +S + + P V+ GD V+VK+L++D + RI+L+++ + + + + NE Sbjct: 317 SEISEERIAKPSDVLNLGDKVRVKILDIDNKENRISLSIKDAVEKPKEDLDKFNDNE 373 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%) Query: 612 VPTVTDIIKELEKPGRDPRPEFK----TAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 T+T + E +K K +N ++PG G V+ + FGAF Sbjct: 159 GKTLTVKVIEFDKDKEKVVLSRKVIEKAEAEEKKQHLLNSIKPGEKRSGVVSRLAKFGAF 218 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 VD+G DGL+H+S LS K V +P VV GD V+V +L VD + +IAL ++ ++E P Sbjct: 219 VDLG-GVDGLIHVSELSWKRVNNPADVVSVGDKVEVYILSVDKENNKIALALKDVNENPW 277 Query: 727 ETNARRGGGNERPQNNRPAAKPRG 750 E+ + + + G Sbjct: 278 ESVGNKFKIGDVVEGEVLKLASFG 301 Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/102 (18%), Positives = 48/102 (47%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 D +M ++ G +++G + +VT A V+IG DG++ S + ++ ++K Sbjct: 16 EDIESSMKSIRRGEVVKGKIISVTENHAIVNIGYMSDGILSKSEVVENEEDNLSDILKEN 75 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ 740 + + V VL+++ + L+ + ++ + + E+ Sbjct: 76 EEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSD 117 Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 27/203 (13%), Positives = 62/203 (30%), Gaps = 7/203 (3%) Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 + E ++ + + + I ++ S + N + + Sbjct: 12 KEFMEDIESSMKSIRRGEVVKGKIISVTENHAIVNI----GYMSDGILSKSEVVENEEDN 67 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 K ++ + G + + E + +E V V Sbjct: 68 LSDILKENEEIYVYVLDMNDGEGNVLLSKKAADKIKAWDELKKAFEEKSDVETTVKEVVK 127 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 G I + S LS +VED + G + VKV+E D ++++ L+ ++ E Sbjct: 128 GGVVTYI-NGIRAFIPASQLSLSYVEDLKSF--IGKTLTVKVIEFDKDKEKVVLSRKVIE 184 Query: 724 QPGETNARRGGGNERPQNNRPAA 746 + ++ N + + Sbjct: 185 KAEAEEKKQHLLNSIKPGEKRSG 207 >UniRef50_Q4YSG2 Putative uncharacterized protein (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4YSG2_PLABE Length = 1016 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 61/457 (13%), Positives = 133/457 (29%), Gaps = 121/457 (26%) Query: 341 KVAVVDATGKLVATDTIYP-------------HTGQAAKAAMTVAALCEKHNVELVAIG- 386 + D G ++ + Q A + +K +++ +G Sbjct: 205 HIVACDIYGDIIEYMYLDNIYIDIIKKEKSIIEQEQIANDINIFLSFLKKMKPDIICVGI 264 Query: 387 ----------------NGTASRETERFYLDVQKQ-------------FPKVTAQKVIVSE 417 N S E + F+ Q + ++ + Sbjct: 265 RDIPSYMIFSYIQNMLNNDRSNEKDYFFSKAQHSNSSIPYNNTSIVIAENLYIPFIVTNN 324 Query: 418 AGASVYSASELAAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDP------KSIGVGQYQ 471 S ++ + + +S+ R +Q+PL ++ + +I + Q Sbjct: 325 LKYSTDLTTKYSREAL--------LCLSLCRYVQNPLDAVLSLFEGENKNMLNICLHDLQ 376 Query: 472 HDVSQTQLARKLDAVVEDCVNAVGVDLN------TASVPLLTRVAGLTRMMAQNIVAWRD 525 + +L ++ D VN G D+N L+ ++GL + ++ Sbjct: 377 KYICGYKLEHVFYRIILDIVNKTGCDINFVKKKKHYFGNALSYISGLGLRKKEELMKLLH 436 Query: 526 ENGQFQNRQQLLKV----SRLGPKAFEQCAGFLRIN----HGDNPLDASTVHPEAYPVVE 577 N R+ LL + + +G + CA F+RI LD + +HP Y V Sbjct: 437 -NRNLNTREDLLTLSSNKNLIGNCVYMNCASFIRIIGTGSEYIEALDNTRIHPINYHDVI 495 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGV------------------------- 612 + ++ +K + Sbjct: 496 -LDLFVNSVDNKKNNFLKNTNIYDIVNYIIDKKKIINNIEIKEYSKKYYLEKKNKINNNT 554 Query: 613 -----PTVTDIIKELEKPGRDPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVT 662 P + + EL P +D R +++ + + E +L G + + + Sbjct: 555 NIFIYPYLKFVKNELLHPYKDYRCQYEKKKEEELFYLIINEKKENLTVGSEVVCKMNFI- 613 Query: 663 NFGAFVDIGVHQDGLVHISSLSN---KFVEDPHTVVK 696 Q+G++ I+ L ++ D +K Sbjct: 614 ---------NKQNGIIKITILPYNIKGYISDSRDFLK 641 >UniRef50_Q48082 30S ribosomal protein S1 n=129 Tax=Proteobacteria RepID=RS1_HAEIN Length = 549 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 42/242 (17%), Positives = 86/242 (35%), Gaps = 14/242 (5%) Query: 512 LTRMMAQNIVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 L + + ++ + N +R+ +++ + L + + + Sbjct: 148 LGKELEFKVIKLDQKRNNVVVSRRAVIESENSQER-----EQVLENLVEGSEVKGVVKNL 202 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 Y + + + +++ + ++ VT + + +K Sbjct: 203 TEYGAFVDLGGVDG------LLHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVS 256 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE- 689 K + L G VTN+T++G FV+I +GLVH+S + Sbjct: 257 LGLKQLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNI 316 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQNNRPAAKP 748 P VV GD V+V VLE+D +R+RI+L ++ P A ++ + Sbjct: 317 HPSKVVSLGDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADTHNKGDKVTGKIKSITD 376 Query: 749 RG 750 G Sbjct: 377 FG 378 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 8/211 (3%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 A + ++ L + Y IL + + + + + Sbjct: 267 WAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDWTNKNIH----PSKVV 322 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 TV ++ E+++ R K + + + G + G + ++T+FG F+ Sbjct: 323 SLGDTVEVMVLEIDEERRRISLGLKQCKANPWTQFADTHNKGDKVTGKIKSITDFGIFIG 382 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTV--VKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG 726 + DGLVH+S +S + V K GD V VL VD ++RI+L ++ L+E P Sbjct: 383 LEGGIDGLVHLSDISWS-ISGEEAVRQYKKGDEVSAVVLAVDAVKERISLGIKQLEEDPF 441 Query: 727 ETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 A +G + + AG Sbjct: 442 NNFVAINKKGAVVSATVVEADAKGAKVELAG 472 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQF----ADGVETMNDLQPGMILEGAVTNVTN 663 + + + +L++ + + + + + +L G ++G V N+T Sbjct: 145 DHLLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTE 204 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD- 722 +GAFVD+G DGL+HI+ ++ K V+ P +V GD V VKVL+ D R R++L ++ Sbjct: 205 YGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVSLGLKQLG 263 Query: 723 EQPGETNARRGGGNERPQNNR 743 + P A N + Sbjct: 264 QDPWAAIAENHPVNSKLTGKV 284 Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 41/319 (12%), Positives = 104/319 (32%), Gaps = 21/319 (6%) Query: 439 SLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDL 498 R ++ + + QDP A + + P + + +++ ++ VE V+ +D Sbjct: 252 RTRVSLGLKQLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGVEGLVHVSEMDW 311 Query: 499 NTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINH 558 ++ ++V L + ++ +E + L F ++ Sbjct: 312 TNKNIHP-SKVVSLGDTVEVMVLEIDEERRRIS--------LGLKQCKANPWTQFADTHN 362 Query: 559 GDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDI 618 + + + + + L+ S ++ + + V+ + Sbjct: 363 KGDKVTGKIKSITDFGIFIGLEGGI----DGLVHLSDISWSISGEEAVRQYKKGDEVSAV 418 Query: 619 IKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLV 678 + ++ K + + + G ++ V GA V++ +G + Sbjct: 419 VLAVDAVKERISLGIKQLEEDPFNNFVAINKKGAVVSATVVEADAKGAKVELAGGVEGYI 478 Query: 679 HISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNER 738 D + V GD+V+ K VD + + + L+++ +Q E A N++ Sbjct: 479 --------RSADLTSEVAVGDVVEAKYTGVDRKSRIVHLSVKAKDQAEEAAAVASVNNKQ 530 Query: 739 PQNNRPAAKPRGREAQPAG 757 P A +A Sbjct: 531 EDIVIPNAMAEAFKAAKGE 549 >UniRef50_D1PP74 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=8 Tax=Bacteria RepID=D1PP74_9FIRM Length = 639 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 71/182 (39%), Gaps = 6/182 (3%) Query: 549 QCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDE 608 + F +Y I + + SEL ++ Sbjct: 464 KREEFWANVEVGKKYQGVVKSLTSYGAFVDIGGVDG------LCHISELSWSNIKHPSEV 517 Query: 609 KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV 668 + +K + + +K + V+ N++ G V ++T FGAFV Sbjct: 518 VNVGDEIEVYVKSYDPENQKVSLGYKKEEDNPWVKLENEVPVGTEFTAPVVSITKFGAFV 577 Query: 669 DIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGET 728 I DGLVHIS +SN+ V V+K GD V+VK+ VD RKRI+L+M+ E+ Sbjct: 578 RIMPGIDGLVHISEISNERVNKVSDVLKVGDEVRVKLTNVDFDRKRISLSMKACLNEDES 637 Query: 729 NA 730 Sbjct: 638 AE 639 Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 1/115 (0%) Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 G T + II+E+ + + + + L G I++ V +V+ Sbjct: 257 VGVTAGASTPSSIIEEVLNSMSEEIRDDMSFEEMLAASEAKPLYAGKIVKAKVISVSPTE 316 Query: 666 AFVDIG-VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 V I G+V + +S+ +VK D + + V++ + Q L+ Sbjct: 317 CVVGIDGSKHTGVVTLREMSHDPNAKMEDLVKVDDELDLVVVKTNDQEGVDTLSR 371 >UniRef50_A6TRF8 RNA binding S1 domain protein n=2 Tax=Alkaliphilus RepID=A6TRF8_ALKMQ Length = 383 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 45/221 (20%), Positives = 81/221 (36%), Gaps = 11/221 (4%) Query: 517 AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVV 576 A+ I R +N +R+++L+ K A + + Sbjct: 158 AKVIEIDRQKNKAVLSRKEVLQQENKEKK-----ADVFAKLEKGMQIRGEVKRLTNFGAF 212 Query: 577 ERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTA 636 I + + + ++ V + + ++ K Sbjct: 213 VDIGGIDGLVHISELSWG------RVKNPSEVVSVEDQVEVKVIDFDETTGKVSLSIKQT 266 Query: 637 QFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVK 696 Q + + G ILEG V + +FGAFV++ DGLVHIS +S + P + Sbjct: 267 QPEPWTLIADKFKAGDILEGKVVRLVDFGAFVELMPGLDGLVHISQISEAHIAKPSEELH 326 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 G V VKVL++++ KRI+L+M ++ N +E Sbjct: 327 VGQNVNVKVLDINIDGKRISLSMTAAQEDSTENEPTEYTDE 367 Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 2/119 (1%) Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 + +++ + G ++ G V V++ G V+IG DG+V +SN P Sbjct: 5 MEELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTITPQD 64 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP--GETNARRGGGNERPQNNRPAAKPRG 750 V KA D + V +++ D + L+ + E E + ++ + G Sbjct: 65 VAKADDEISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESVKGG 123 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 62/209 (29%), Gaps = 10/209 (4%) Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI-LAATQQALKDLMGNSSELRNLKA 602 + E+ L + + + I A +D + N + Sbjct: 6 EELMEEIEKSLIRPKRGEVVTGKVIQVSDKGITVNIGYKADGIVPRDEISNDPTITPQDV 65 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 + DE IIK + G + + ++E V Sbjct: 66 AKADDE-----ISVYIIKTDDGEGNVLLSTKRVEHTKGWEDLEKIHDTESLVESKVVESV 120 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 G + I + S LS+++V+D T G KV+E+D Q+ + L+ + Sbjct: 121 KGGV-IAIARGIRCFIPASQLSDRYVDDLKTF--VGKSFNAKVIEIDRQKNKAVLSRKEV 177 Query: 723 EQPGETNARRGGGNERPQNNRPAAKPRGR 751 Q E ++ + + R Sbjct: 178 LQ-QENKEKKADVFAKLEKGMQIRGEVKR 205 >UniRef50_Q49XT0 30S ribosomal protein S1 n=6 Tax=Staphylococcaceae RepID=RS1_STAS1 Length = 393 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 44/216 (20%), Positives = 80/216 (37%), Gaps = 6/216 (2%) Query: 507 TRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS 566 + + Q + +E NR L + + + E+ L + + ++ Sbjct: 141 DFIEDFSDFEGQVLKLKVEELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEGK 200 Query: 567 TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 + I + + TV IK ++K Sbjct: 201 VARLTNFGAFVDIGGVDGLVHVSELSHEHVKSPEDVVSI------GETVNVKIKSVDKDS 254 Query: 627 RDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK 686 K + + G ++EG V + NFGAFV+I GLVHIS +S+ Sbjct: 255 ERISLSIKDTLPSPFESIKGEFNEGDVIEGTVVRLANFGAFVEIKPGVQGLVHISEISHS 314 Query: 687 FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 + P ++ G +V VKVL VD++ +RI+L+++ Sbjct: 315 HIGSPSEALEPGQVVSVKVLGVDVENERISLSIKAT 350 Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 4/155 (2%) Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 ++ + N + ++ G E + G + + L Sbjct: 50 STHHIDNPSDAVKVGDEIGAYVTKVEYDEENETGAYILSKRQLETEKSYEFLQEQLDNNQ 109 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 +E VT V G VD+ Q G V S +S F+ED G ++K+KV E+D Sbjct: 110 TIEAKVTEVVKGGLVVDV--GQRGFVPASLISTDFIEDFSDF--EGQVLKLKVEELDPAN 165 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAK 747 R+ L+ + E + + + K Sbjct: 166 NRVILSRKAVEALENAEKKDELLESLNEGDVIEGK 200 Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +ND++ G + G V + V + G +G++ IS LS +++P VK GD + Sbjct: 9 MINDIKEGDKVTGEVQEIEEKQVIVAVNGAKFNGIIPISQLSTHHIDNPSDAVKVGDEIG 68 Query: 703 VKVLEVDLQ 711 V +V+ Sbjct: 69 AYVTKVEYD 77 >UniRef50_A3DDC0 Hydroxymethylbutenyl pyrophosphate reductase n=7 Tax=Clostridiales RepID=A3DDC0_CLOTH Length = 694 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 96/274 (35%), Gaps = 13/274 (4%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCA-GFLRINHG 559 AS V L + ++I E + + R+ + + + E A Sbjct: 425 ASQVSDRYVKDLNEFLKRSITVRILELNE-KRRKVVGSARVIIEEEKEALANRTWNSMEV 483 Query: 560 DNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDII 619 + + I + + SEL + ++ V + Sbjct: 484 GKVFKGTVKSLTDFGAFVDIGGVDG------LIHISELSWTRVKHPSEVLKVGDEVEVTV 537 Query: 620 KELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVH 679 E +K + ++ + + + G +++ V FGAFV++ DGLVH Sbjct: 538 LEFDKEKKKVSLGYRKMEDNPWYKIEEKYKVGDVVKVTVLRFAPFGAFVELEKGVDGLVH 597 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD---EQPGETNARRGGGN 736 IS +S+K + ++ G V K++EVD + K+I+L+++ + P + + Sbjct: 598 ISQISSKRLAKVEDALEIGMKVDAKIIEVDGENKKISLSIKEVMPIDPPSSKSESKAKDG 657 Query: 737 ERPQNNRP--AAKPRGREAQPAGNSAMMDALAAA 768 + + E + N + D ++ Sbjct: 658 SEAKETSANTEEEAEPTEHREDMNVTVEDLVSKT 691 Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 47/399 (11%), Positives = 127/399 (31%), Gaps = 52/399 (13%) Query: 345 VDATGKLVA------TDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASRETERFY 398 + G ++ I+ + ++ + + ++++ E++ I ++ Sbjct: 84 ISDKGLILEDATCPYVKKIHNLVKEKSEEGYKIIIVGDRNHPEVIGINGWCNNQAYIVDS 143 Query: 399 LDVQKQFPKVTAQKVIV------SEAGASVYSASELAAQEFPDLDVSLRGAVSIARRLQD 452 +D ++FP + +V +E V +A + + D + +RR Q+ Sbjct: 144 VDDVEKFPTSDEKVCVVAQTTITNEKWLEVNTALKKKFKNILKFDTI---CSATSRR-QN 199 Query: 453 PLAELVK-------IDPKSIGVGQYQHDVSQT--------QLARKLDAVVEDCVNAVGVD 497 E+ K I K+ Q +D+ + + + L V + VG+ Sbjct: 200 EAEEIAKNVDMMIIIGGKNSSNTQKLYDICKKHCNLTYKIETSGDLPPVDIKKIKKVGIS 259 Query: 498 LNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQC-AGFLRI 556 ++ + I + + + + + G F Sbjct: 260 AGASTPDWV-------------IEEVIKKMSELNKQGMVDILENDGEIDFANAFENSFVR 306 Query: 557 NHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVT 616 H + + + + V + ++ + + + K G Sbjct: 307 IHAGDTVKGKIIGFNSNEVFVDL----GYKADGIIPLEEYTDDPNFNIEKEVKIGEEVEV 362 Query: 617 DIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDG 676 + + G + K + + + + V V G + Sbjct: 363 LVEMVNDGEGNVRLSKRKVDAIKSWDDIVKAYENKTPVNAYVVEVVKGGV-IASYKGVRI 421 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V S +S+++V+D + +K + V++LE++ +R+++ Sbjct: 422 FVPASQVSDRYVKDLNEFLKR--SITVRILELNEKRRKV 458 Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 3/128 (2%) Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVE-TMNDLQPGMILEGAVTNVTNFGAFVDI 670 + + + ++ D FA+ E + + G ++G + + FVD+ Sbjct: 270 EEVIKKMSELNKQGMVDILENDGEIDFANAFENSFVRIHAGDTVKGKIIGFNSNEVFVDL 329 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE--QPGET 728 G DG++ + ++ + VK G+ V+V V V+ + L+ R + + + Sbjct: 330 GYKADGIIPLEEYTDDPNFNIEKEVKIGEEVEVLVEMVNDGEGNVRLSKRKVDAIKSWDD 389 Query: 729 NARRGGGN 736 + Sbjct: 390 IVKAYENK 397 >UniRef50_B3QSU3 Ribosomal protein S1 n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QSU3_CHLT3 Length = 616 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 38/254 (14%), Positives = 88/254 (34%), Gaps = 9/254 (3%) Query: 491 VNAVGVDLNT-ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ 549 V+ GV+ S + V ++ Q + + + L + + Sbjct: 150 VSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDFRVVKINPLTQNIVVSHKVILEEEYEAR 209 Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 L L+ + + + + + + + S ++ Sbjct: 210 RKEMLANIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWG------RISHPSEAV 263 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 + ++ + + K G + G V ++T++GAFV+ Sbjct: 264 NLDDPIKVVVIGYDADKQRVSLGMKQLTPHPWENIEEKYPAGTRVTGKVVSITDYGAFVE 323 Query: 670 IGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGE 727 I +GLVHIS +S + ++ P+ V G V+ +L +D + +++L+M+ +E P Sbjct: 324 IEKGIEGLVHISEMSWTQHIKHPNQFVTMGQEVECVILNIDKEHTKLSLSMKQTEEDPWI 383 Query: 728 TNARRGGGNERPQN 741 A + + + Sbjct: 384 VLAEKYPVDSEHKG 397 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 88/284 (30%), Gaps = 13/284 (4%) Query: 482 KLDAVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSR 541 +++ +E V+ + V + + + I+ E+ + L + + Sbjct: 323 EIEKGIEGLVHISEMSWTQHIKHPNQFVT-MGQEVECVILNIDKEHTKLS-----LSMKQ 376 Query: 542 LGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 + A ++ + + V + + L+ S K Sbjct: 377 TEEDPWIVLAEKYPVDSEH---KGIVRNITDFGVFVELESGV----DGLVHISDLSWTKK 429 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 ++ + + + + R K + + ND G +G + + Sbjct: 430 IRHPSEIVKKNQELDVKVLKFDVKARRIALGHKQIEPDPWSDFENDYAVGTETKGKIAQI 489 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 G V++ DG V S L V D + K GD + +KV+E D + KRI L+ Sbjct: 490 IEKGVIVELPSGVDGFVPASHLLQGGVRDINASFKVGDELPLKVIEFDRENKRIILSALE 549 Query: 722 DEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDAL 765 + + P+ + + P+G+ Sbjct: 550 YFKGKSKEEIEEYMKQHPKEKQEIQEATAELDAPSGSGDKKAKE 593 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 60/168 (35%), Gaps = 5/168 (2%) Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKEL-EKPGRDP 629 E + + + D+ S + L +E V ++ + +K G+ Sbjct: 52 EEIVKGRVVSISEKDVTIDVGLKSEGIVQLIEFQNPEELKEGDDVEVFLESIEDKMGQLI 111 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 + K + + L+ G I+ G + G V + + + S + K V Sbjct: 112 LSKRKADVMRIWEKIYDSLEKGTIISGKIIARVKGGMTVSL-SGVEAFLPGSQIDVKPVR 170 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGN 736 D + G + +V++++ + I ++ ++ E+ E + N Sbjct: 171 DFDAL--VGQTMDFRVVKINPLTQNIVVSHKVILEEEYEARRKEMLAN 216 >UniRef50_C5NX49 30S ribosomal protein S1 n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NX49_9BACL Length = 402 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 90/225 (40%), Gaps = 12/225 (5%) Query: 498 LNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 ++T L++ G + + +N NR+ +L+ + ++ A Sbjct: 152 IDTKFRKDLSKFVG-NEYTFKIEEVDKSKNKIILNRRVILEEEK-----AKKLAEVYGNI 205 Query: 558 HGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 + + ++ + I + ++ + D T+ Sbjct: 206 NEGDVIEGKVSRITDFGAFVNIGEVDGLLHISEISHA------RVEKVADVLSVGDTIKV 259 Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 + ++K KT ++ G LEG V N T FGAFV++ +GL Sbjct: 260 AVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALEGVVRNTTAFGAFVEVLPDVEGL 319 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 VHIS +S++ V + V+K GD V VKVLE D + +R++L+++ Sbjct: 320 VHISQISHERVTNVEDVLKKGDKVNVKVLEFDFENERLSLSIKEL 364 Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 71/173 (41%), Gaps = 3/173 (1%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 + S F ++ + ++ K K + R + + Sbjct: 137 LADVEGLRAFIPGSYIDTKFRKDLSKFVGNEYTFK-IEEVDKSKNKIILNRRVILEEEKA 195 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 E ++ G ++EG V+ +T+FGAFV+IG DGL+HIS +S+ VE V+ G Sbjct: 196 KKLAEVYGNINEGDVIEGKVSRITDFGAFVNIGE-VDGLLHISEISHARVEKVADVLSVG 254 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 D +KV V+ VD + ++++L+ + L E + + G Sbjct: 255 DTIKVAVIAVDKENEKVSLSAKTLLPTQWEVARATIKAGDALEGVVRNTTAFG 307 Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 46/100 (46%), Gaps = 9/100 (9%) Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPH 692 T F + + + L+ G + G V+ + N +VD+ G D ++ + ++ K E+ Sbjct: 1 MTTSFEELLNSSEMLKKGDKVTGTVSKIDNDKVYVDVAGAQYDCVILRNQITRKPFENIE 60 Query: 693 TVVKAGDIVKVKVLEVDLQRKR--------IALTMRLDEQ 724 V+ GD V+ +V + R++ I L+ ++ E Sbjct: 61 DVLSVGDEVEAQVTGIRADREKRSEDVPGVIYLSHKILEN 100 >UniRef50_B0MQU3 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B0MQU3_9FIRM Length = 658 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 85/231 (36%), Gaps = 16/231 (6%) Query: 492 NAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCA 551 + GV + LL + + I + +Q K + K A Sbjct: 428 SQTGVPKDGKLEELLKKTVPF-----KVIEVTEARGRVVGSIRQAKKEANDAAK-----A 477 Query: 552 GFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFG 611 F E+Y V + +SSEL + + Sbjct: 478 KFWENIEVGQKFTGEVKSIESYGVFVDLGGVDGMV------HSSELTWNRIKHPREIVKI 531 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 + +K + + K + + + + G +++ + ++T FGAF I Sbjct: 532 GDKLDVYVKSFDPEKKRVSLGCKKEEDNPWNKFVAEYSEGDVVDVTIVSITPFGAFAQII 591 Query: 672 VHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 DGL+HIS +S + + + V+ GD VK K++E++ ++ R++L++R Sbjct: 592 PGVDGLIHISQISTERINNVAQVLSIGDEVKAKIIEINEEQNRVSLSIRAL 642 Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 1/114 (0%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQF-ADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 G T IIKE+ + + + F A+ +T + G ++ V V A VD Sbjct: 271 GASTPAYIIKEVHRIMSEILNNEEGFDFMAEVDKTFKKVYIGNRVKALVVAVNKNEAVVD 330 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 +G G + S LS P VVK GD ++ V V+ + L+ + + Sbjct: 331 LGTKHSGYIPASELSQDPNAAPSDVVKVGDEIEAIVTAVNDAEGTVTLSKKKVD 384 Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 55/382 (14%), Positives = 119/382 (31%), Gaps = 25/382 (6%) Query: 379 NVELVAIGNGTASRETERFYLD--------VQKQFPKVTAQKVIVSEA--GASVYSASEL 428 + E++ I + + D ++FP+ A ++ + S ++ Sbjct: 123 HPEVIGIVGHCRNPDEVSVVRDSDELEKMAELQKFPRQNALIMVAQTTFNSSKWQSCIQV 182 Query: 429 AAQEFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVE 488 A + + ++ + + A R Q EL + + VG ++ + +LA+ Sbjct: 183 AKKHYTNITIFDTICSATAER-QKETEELARRSALMVTVG-GKNSSNTAKLAQISQKHCP 240 Query: 489 DCVNAVGVDLNTASVPLLTRVAGLTRMM---AQNIVAWRDENGQFQNRQQLLKVSRLGPK 545 G D++ A+V L + G T + A E + + + L Sbjct: 241 VIFTQDGSDIDKAAVSELLPLQGGTVGITAGASTPAYIIKEVHRIMS-EILNNEEGFD-- 297 Query: 546 AFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDF 605 + + + N + A V V + + S ++ A+ Sbjct: 298 FMAEVDKTFKKVYIGNRVKALVVAVNKNEAVVDL----GTKHSGYIPASELSQDPNAAPS 353 Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFG 665 K G + + G + K + ++ LEG V++V G Sbjct: 354 DVVKVGDEIEAIVTAVNDAEGTVTLSKKKVDSVLGVEKLAAAMENNETLEGEVSSVVKGG 413 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP 725 + I + S ++K V KV+EV R R+ ++R ++ Sbjct: 414 VII-ISNGTRVFIPASQTGVPKDGKLEELLKK--TVPFKVIEVTEARGRVVGSIRQAKKE 470 Query: 726 GETNARRGGGNERPQNNRPAAK 747 A+ + + Sbjct: 471 ANDAAKAKFWENIEVGQKFTGE 492 >UniRef50_P46836 30S ribosomal protein S1 n=166 Tax=Actinobacteria (class) RepID=RS1_MYCLE Length = 481 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 94/264 (35%), Gaps = 16/264 (6%) Query: 501 ASVPLLTRVAGLTRMM-----AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS+ + RV L + A+ I ++ N +R+ L+ ++ + + FL Sbjct: 150 ASLVEMRRVRDLQPYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVR-----SEFLN 204 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 + + + + SEL ++ V Sbjct: 205 QLQKGAIRKGVVSSIVNFGAFVDLGGVDG------LVHVSELSWKHIDHPSEVVQVGNEV 258 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 T + +++ K Q G I+ G VT + FGAFV + + Sbjct: 259 TVEVLDVDMDRERVSLSLKATQEDPWRHFARTHAIGQIVPGKVTKLVPFGAFVRVEEGIE 318 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGG 735 GLVHIS L+ + VE P VV GD VKV+++DL+R+RI+L+++ + Sbjct: 319 GLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISLSLKQANEDYIEEFDPAKY 378 Query: 736 NERPQNNRPAAKPRGREAQPAGNS 759 + P N Sbjct: 379 GMADSYDEQGNYIFPEGFDPDSNE 402 Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/172 (13%), Positives = 56/172 (32%), Gaps = 8/172 (4%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 ++ + + ++ + V + + +L + ++ Sbjct: 26 IDKTIKYFNDGDIVEGTIVKVDR----DEVLLDIGYKTEGVIPARELSIKHDVDPNEVVS 81 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 G ++ + +K GR + + + ++G V V G +D Sbjct: 82 VGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEALKEKDEAVKGIVIEVVKGGLILD 141 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 I G + S + + V D G ++ K++E+D R + L+ R Sbjct: 142 I--GLRGFLPASLVEMRRVRDLQPY--IGKEIEAKIIELDKNRNNVVLSRRA 189 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%) Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G I+EG + V +DIG +G++ LS K DP+ VV GD V+ VL + Sbjct: 36 GDIVEGTIVKVDRDEVLLDIGYKTEGVIPARELSIKHDVDPNEVVSVGDEVEALVLTKED 95 Query: 711 QRKRIALTMRLD--EQPGETNARRGGGNERPQN 741 + R+ L+ + E+ T +E + Sbjct: 96 KEGRLILSKKRAQYERAWGTIEALKEKDEAVKG 128 >UniRef50_Q9Z8M3 30S ribosomal protein S1 n=18 Tax=Chlamydiae/Verrucomicrobia group RepID=RS1_CHLPN Length = 580 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 42/241 (17%), Positives = 86/241 (35%), Gaps = 17/241 (7%) Query: 499 NTASVPLLTRVAGLTRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRIN 557 N L V ++ I+ + +R++LL+ R+ K A + Sbjct: 166 NKKIKNLDDYV---GKVCEFKILKINVERRNIVVSRRELLEAERISKK-----AELIEQI 217 Query: 558 HGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTD 617 + + V + + + +++ + ++ + Sbjct: 218 SIGEYRKGVVKNITDFGVFLDLDGIDG------LLHITDMTWKRIRHPSEMVELNQELEV 271 Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGL 677 II ++K K + + PG + G + + +GAF++I +GL Sbjct: 272 IILSVDKEKGRVALGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYGAFIEIEEGIEGL 331 Query: 678 VHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGG 735 +HIS +S K + DP VV GD V+ VL + +I+L ++ E P + + Sbjct: 332 IHISEMSWVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKISLGLKQTERNPWDNIEEKYPI 391 Query: 736 N 736 Sbjct: 392 G 392 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 5/181 (2%) Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y + + L+ S K S ++ +V +I ++K + Sbjct: 404 NYGAFVELEPGI----EGLIHISDMSWIKKVSHPSELFKKGNSVEAVILSVDKESKKITL 459 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K E G ++ G VT +T FGAFV++ +GL+H+S LS+K Sbjct: 460 GVKQLSSNPWNEIEAMFPAGTVISGVVTKITAFGAFVELQNGIEGLIHVSELSDKPFAKI 519 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++ G+ V KV+++D K+++L+++ R + + K +G Sbjct: 520 EDIISIGENVSAKVIKLDPDHKKVSLSVKEYLADNAYDQDSRTELDFKDSQGPKERKKKG 579 Query: 751 R 751 + Sbjct: 580 K 580 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 45/241 (18%), Positives = 78/241 (32%), Gaps = 14/241 (5%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 L + + I++ E G+ L K + + V Sbjct: 265 LNQELEVIILSVDKEKGRVA--------LGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLL 316 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y I + L+ S D ++ V I+ ++K Sbjct: 317 PYGAFIEIEEGI----EGLIHISEMSWVKNIVDPSEVVNKGDEVEAIVLSIQKDEGKISL 372 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVED 690 K + G+ + + N+TN+GAFV++ +GL+HIS +S K V Sbjct: 373 GLKQTERNPWDNIEEKYPIGLHVNAEIKNLTNYGAFVELEPGIEGLIHISDMSWIKKVSH 432 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPR 749 P + K G+ V+ +L VD + K+I L ++ L P Sbjct: 433 PSELFKKGNSVEAVILSVDKESKKITLGVKQLSSNPWNEIEAMFPAGTVISGVVTKITAF 492 Query: 750 G 750 G Sbjct: 493 G 493 Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 69/173 (39%), Gaps = 3/173 (1%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 ++ + D+ + + I E R + + Sbjct: 149 LIVDIGMEAFLPGSQIDNKKIKNLDDYVGKVCEFKILK-INVERRNIVVSRRELLEAERI 207 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + E + + G +G V N+T+FG F+D+ DGL+HI+ ++ K + P +V+ Sbjct: 208 SKKAELIEQISIGEYRKGVVKNITDFGVFLDLD-GIDGLLHITDMTWKRIRHPSEMVELN 266 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 ++V +L VD ++ R+AL ++ E P E ++ +R P G Sbjct: 267 QELEVIILSVDKEKGRVALGLKQKEHNPWEDIEKKYPPGKRVLGKIVKLLPYG 319 Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 57/177 (32%), Gaps = 4/177 (2%) Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 V I L + G + + ++ G+ Sbjct: 57 GTVVDINKDFVVVDVGLKSEGVIPMSEFIDSSEGLVLGAEVEVYLDQAEDEEGKVVLSRE 116 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K + + + G I++G +T G VDI + + S + NK +++ Sbjct: 117 KATRQRQWEYILAHCEEGSIVKGQITRKVKGGLIVDI--GMEAFLPGSQIDNKKIKNLDD 174 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 G + + K+L+++++R+ I ++ R + + + + + Sbjct: 175 Y--VGKVCEFKILKINVERRNIVVSRRELLEAERISKKAELIEQISIGEYRKGVVKN 229 >UniRef50_A5N6D1 30S ribosomal protein S1 n=2 Tax=Clostridium kluyveri RepID=A5N6D1_CLOK5 Length = 314 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 40/232 (17%), Positives = 84/232 (36%), Gaps = 10/232 (4%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + + + ++ + L + E + ++ Sbjct: 76 IGKTLKVKLIQLDKSKNKIV----LSGKEVEKLELEEMSKKLWSTISKGDKIEGRVSRIT 131 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + V + + + SEL K D ++ + + L + Sbjct: 132 NFGVFVDLGGVEG------LVHISELSWKKIKDPSEVVSVGDKLKVYVLNLNQDRNRISL 185 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K + + I++G V+ V N GAF++I +GLVHIS +S + + P Sbjct: 186 SIKRTLNSPWENIGKKYKSNDIVDGIVSKVINIGAFIEIEPGIEGLVHISEISQEHITTP 245 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNR 743 V++ GD VKVK+L +D + RI+L+++ + N + +++ Sbjct: 246 EEVLRVGDKVKVKILNIDEKASRISLSIKEAQDKFSPNFKEYKEYLDKDSDK 297 Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDI 700 + N+ + I E + + G D+ + S +S K+ +D G Sbjct: 23 WSKLENEFKNEDIFEVVIKELVKGGLIADLH-GLRAFIPASHISVKYTDDLKEF--IGKT 79 Query: 701 VKVKVLEVDLQRKRIALT 718 +KVK++++D + +I L+ Sbjct: 80 LKVKLIQLDKSKNKIVLS 97 >UniRef50_C5S7U3 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S7U3_CHRVI Length = 402 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 52/280 (18%), Positives = 97/280 (34%), Gaps = 25/280 (8%) Query: 501 ASVPLLTRVAGL----TRMMAQNIVAWRDENGQ--FQNRQQLLKVSRLGPKAFEQCAGFL 554 AS + + L + + I + +R+ LL+ E+ L Sbjct: 141 ASQIDIRFIEDLSEFVGQKLDFRITKFEGGRRPNLVVSRRALLEEE--QRLKAEELRAQL 198 Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + L + + Y + + +++ K + V Sbjct: 199 KEGA---VLTGTVTSLKDYGAFVDLGGLEGMIHISQL-AFGHVKHPKEVLQVGQPIEVSV 254 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + K + ++ + G ++G V + FGAF+++ Sbjct: 255 LRIEPATDAKKRDKIALSIRALSRDPWLDAIEQFPAGTRVQGRVARLQPFGAFIELAPGV 314 Query: 675 DGLVHISSL-SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 DGLVHIS L + + V+ P V+K GD V V+ VDL+R+RI+L++ ++ E +A Sbjct: 315 DGLVHISELGAGRRVQHPSDVLKEGDEVTATVIGVDLERRRISLSL---DENREVDAAAA 371 Query: 734 GGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR 773 A K G + L ++ K R Sbjct: 372 VVIATAAKKPAAEKTMG---------SFGALLQESLKKGR 402 >UniRef50_B5YH71 30S ribosomal protein S1 n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YH71_THEYD Length = 534 Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 80/246 (32%), Gaps = 13/246 (5%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLD------A 565 + + I + + L L KA+ Q + Sbjct: 151 VGKTFKVKIEKIEPPKNLYGQWRNLKTSLILSRKAYLQEEKEKMKKEISEKIKEGLKIKG 210 Query: 566 STVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKP 625 + + Y V + + K + I+ + + Sbjct: 211 TVKNITNYGVFVDLGGLDGFLHISDISWG------KVRHPSQFFEIGSEYEFIVLKADTE 264 Query: 626 GRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN 685 +K + PGM + G VT V +FG FV++ +GLVH+S L Sbjct: 265 NERITLGYKQKKADPWENIDKKYHPGMKVRGKVTRVEDFGLFVELEEGVEGLVHVSELDW 324 Query: 686 KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRP 744 + P + + + VKVL++D + ++I+L+ + L +P E A++ +R Sbjct: 325 IAPKHPTYYAEVDEWINVKVLDIDRENRKISLSFKQLKPKPWEVVAKKYKVGDRISGKVK 384 Query: 745 AAKPRG 750 G Sbjct: 385 TITDFG 390 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 8/186 (4%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + H + E + + + + + + ++ DE V Sbjct: 285 KKYHPGMKVRGKVTRVEDFGLFVELEEGVEGLVHVSELDWIAPKHPTYYAEVDEWINVKV 344 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + +++ R FK + + G + G V +T+FG FV + Sbjct: 345 LD-----IDRENRKISLSFKQLKPKPWEVVAKKYKVGDRISGKVKTITDFGIFVRLPEGV 399 Query: 675 DGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPG-ETNAR 731 DGL+HIS +S K ++ P + K G V +L ++ ++++++L ++ L E P + Sbjct: 400 DGLIHISDISWTKHIDHPSQIFKKGQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPE 459 Query: 732 RGGGNE 737 + E Sbjct: 460 KFKIGE 465 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 71/198 (35%), Gaps = 14/198 (7%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +NR+ L +L PK +E A + + + + R+ L Sbjct: 350 ENRKISLSFKQLKPKPWEVVAK---KYKVGDRISGKVKTITDFGIFVRLPEGV----DGL 402 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV-ETMNDLQ 649 + S + V +I LE K + E + Sbjct: 403 IHISDISWTKHIDHPSQIFKKGQKVDAVILSLEPEKEKLSLGIKQLSEDPWIKEIPEKFK 462 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 G I V T G FVDI +GLV+ S + VK GD +KV V++VD Sbjct: 463 IGEIYNAKVIKKTEHGLFVDIEGIVEGLVYNSEIDKNR------TVKEGDEIKVIVVKVD 516 Query: 710 LQRKRIALTMRLDEQPGE 727 ++++I L+M+ ++ E Sbjct: 517 KEKRKIGLSMKKIDENEE 534 Score = 55.5 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 53/122 (43%), Gaps = 5/122 (4%) Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 + K + +++ ++ G I++G + V N G VD+G +G++ ++ S + ++ Sbjct: 4 QLSEKQELESLYEGSLSHIERGEIIKGKIMGVRNDGVIVDVGYKFEGIIPLNEFSEEELK 63 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGGGNERPQNNRPAAKP 748 + D ++V + ++D + I+L+ R + G P + K Sbjct: 64 NIKEA----DEIEVFIEKIDDAQGIISLSRDRALKIKGWEILMDAYEKALPVEVKITGKT 119 Query: 749 RG 750 +G Sbjct: 120 KG 121 >UniRef50_Q7X2Y7 Putative 30S ribosomal protein S1 (Fragment) n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2Y7_9BACT Length = 318 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 2/148 (1%) Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEG 656 + + + TV + ++ R K Q Q G + G Sbjct: 1 SWSKRVKHPSKLVNPGDTVEVEVLSVDPKARRISLGMKQIQDNPWQTLHERYQVGTRVHG 60 Query: 657 AVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V N+T+FGAF++I DGLVH+S +S + ++ P V+K G + + +D + +R+ Sbjct: 61 RVRNLTDFGAFIEIEDGVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRL 120 Query: 716 ALTMR-LDEQPGETNARRGGGNERPQNN 742 +L+++ L+ + + + Sbjct: 121 SLSIKDLEPNAWDRFLTEHKPGDVVRGK 148 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 17/206 (8%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVH-----PEAYPVVERILAATQQ 585 + R+ L + ++ ++ ++ + VH + I + Sbjct: 29 KARRISLGMKQIQDNPWQTLHERYQV--------GTRVHGRVRNLTDFGAFIEI----ED 76 Query: 586 ALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETM 645 + L+ S + + ++ + +I ++ R K + + Sbjct: 77 GVDGLVHVSDISWSRRIKHPSEVLKKGQEIDAVITSIDAENRRLSLSIKDLEPNAWDRFL 136 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + +PG ++ G + NFGAFV++ + +GL HIS LS++ VE P VV+ G ++ K+ Sbjct: 137 TEHKPGDVVRGKIARFANFGAFVELDDNLEGLCHISELSDERVEKPEDVVQLGQEMEFKI 196 Query: 706 LEVDLQRKRIALTMRLDEQPGETNAR 731 L +D++ K+I L+ R + E Sbjct: 197 LRIDVESKKIGLSARSVGKDDEPIVD 222 >UniRef50_B3E440 Ribosomal protein S1 n=3 Tax=Deltaproteobacteria RepID=B3E440_GEOLS Length = 573 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 6/188 (3%) Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 V Y + + + L+ S + D V ++ ++ Sbjct: 297 GKVVSLMDYGAFIELESGI----EGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDL 352 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 R K G LEG + N+T+FG F+ I DGLVH+S +S Sbjct: 353 QNRKISLGLKQVNDNPWQSIAERYPVGTKLEGQIKNMTDFGMFIGIEEGIDGLVHVSDIS 412 Query: 685 N-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 K V+ P V GD+V+ VL+VD Q +R++L ++ L P ++ R Sbjct: 413 WTKRVKHPGDVYSKGDLVQAVVLKVDPQNERVSLGIKQLTPDPWSLVPQKYAPGTRLVGK 472 Query: 743 RPAAKPRG 750 + G Sbjct: 473 VASTTDFG 480 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 48/268 (17%), Positives = 90/268 (33%), Gaps = 19/268 (7%) Query: 491 VNAVGVDLNTASVPLLTRVAGLTRM------MAQNIVAWRDENGQFQNRQQLLKVSRLGP 544 V G++ + + TR +G + I + +R+ LL+ R Sbjct: 137 VAIGGINAFLPASQVDTRPSGNGDAYIGVAGQFKVISLNQKRGNIVLSRRALLEEER--- 193 Query: 545 KAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASD 604 E L + + Y + + + Sbjct: 194 --AESRKATLEKLSEGQIMQGVVKNLTEYGAFVDLGGVDGLLHVTDISWG------RVGK 245 Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 D V I + ++ K + N G + G V ++ ++ Sbjct: 246 PADVLKPGQEVNVKILKFDREKGKVSVGIKQTLPDPWQDIANRFPEGTRVSGKVVSLMDY 305 Query: 665 GAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD- 722 GAF+++ +GLVH+S +S K V ++ GD V V VL VDLQ ++I+L ++ Sbjct: 306 GAFIELESGIEGLVHVSEMSWTKRVRKAADMLNVGDQVDVVVLGVDLQNRKISLGLKQVN 365 Query: 723 EQPGETNARRGGGNERPQNNRPAAKPRG 750 + P ++ A R + + G Sbjct: 366 DNPWQSIAERYPVGTKLEGQIKNMTDFG 393 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 7/192 (3%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 QNR+ L + ++ ++ A + L+ + + + I L Sbjct: 353 QNRKISLGLKQVNDNPWQSIAERYPVGTK---LEGQIKNMTDFGMFIGIEEGI----DGL 405 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + S + D V ++ +++ K P Sbjct: 406 VHVSDISWTKRVKHPGDVYSKGDLVQAVVLKVDPQNERVSLGIKQLTPDPWSLVPQKYAP 465 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDL 710 G L G V + T+FG FV+I +GL+H+S LS + V GD ++ VL D Sbjct: 466 GTRLVGKVASTTDFGVFVEIEEGIEGLIHVSELSREKVPSAKDFAIVGDSIEAVVLNADS 525 Query: 711 QRKRIALTMRLD 722 + +RI+L+++ Sbjct: 526 RERRISLSVKSL 537 Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/132 (22%), Positives = 46/132 (34%), Gaps = 13/132 (9%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + + + + + F+ ++ + ILEG V V VD+G Sbjct: 4 VKRLNVDTDDMDVEHQSNEFAELFSASLKEQERPERDKILEGTVVRVDPDTVLVDVGRKS 63 Query: 675 DGLVHISSL--SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ--PGETNA 730 +G V IS + V V GD VKV V D K + + +Q ET Sbjct: 64 EGFVPISEFRDAEGNVS-----VSVGDKVKV-VSSRDGGNK---FSKKRADQMAAWETIH 114 Query: 731 RRGGGNERPQNN 742 GG + Sbjct: 115 EAGGEGAVLEGT 126 >UniRef50_C5CIV0 RNA binding S1 domain protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CIV0_KOSOT Length = 572 Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 7/205 (3%) Query: 548 EQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTD 607 E+ + + ++ + + + R+ + + + + Sbjct: 183 EKVKAYFEALETGSTVEGTIESIKDFGAFVRLTNEVVGLIPASEVSWDPSQKVHDVLNVG 242 Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 +K V + ++ + K Q G ++EG V ++ FG F Sbjct: 243 DKVTVKVID-----VDPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFF 297 Query: 668 VDIGVHQDGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQP 725 V I +GLVHIS + V D +++ GD VKVK+ ++D +++ ++L+ R P Sbjct: 298 VMIEPGVEGLVHISEVFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDP 357 Query: 726 GETNARRGGGNERPQNNRPAAKPRG 750 + + E P G Sbjct: 358 WDNIEEKYKVGEIVDGKVVKVLPTG 382 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 1/141 (0%) Query: 611 GVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI 670 G I +K G + + L+ G +EG + ++ +FGAFV + Sbjct: 155 GEQEFKVINFRKKKRGTNIVVSLTAFKEEKVKAYFEALETGSTVEGTIESIKDFGAFVRL 214 Query: 671 GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETN 729 GL+ S +S + H V+ GD V VKV++VD ++K+I+L+++ L E P T Sbjct: 215 TNEVVGLIPASEVSWDPSQKVHDVLNVGDKVTVKVIDVDPEKKKISLSLKQLQEDPWNTV 274 Query: 730 ARRGGGNERPQNNRPAAKPRG 750 + + + P G Sbjct: 275 EEKYPVGSVVEGVVKSIVPFG 295 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 36/197 (18%), Positives = 69/197 (35%), Gaps = 5/197 (2%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + ++ + I + + +R D + Sbjct: 276 EKYPVGSVVEGVVKSIVPFGFFVMIEPGVEGLVHISEVFWGNVRR----DLKELIREGDR 331 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V IK+++K R ++ A + G I++G V V GA V++ + Sbjct: 332 VKVKIKDIDKEKRTLSLSYREALGDPWDNIEEKYKVGEIVDGKVVKVLPTGAIVELEEYV 391 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRG 733 G V +S +S FV+ VVK VK K+L +D + +R+ L+++ E P + Sbjct: 392 SGFVPVSEMSWNFVDRVEDVVKESSEVKTKILSIDKENRRMRLSLKQATEDPWQKVHTEL 451 Query: 734 GGNERPQNNRPAAKPRG 750 + + G Sbjct: 452 KVGDYVEGKITRLIKSG 468 Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 99/298 (33%), Gaps = 17/298 (5%) Query: 452 DPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAG 511 DP + + + K + + + + ++ VV+ V + V L ++ Sbjct: 253 DPEKKKISLSLKQLQEDPWNTVEEKYPVGSVVEGVVKSIVPFGFFVMIEPGVEGLVHISE 312 Query: 512 L--TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAG-----FLRINHGDNPLD 564 + + R+ + + + K R ++ + G +D Sbjct: 313 VFWGNVRRDLKELIREGDRVKVKIKDIDKEKRTLSLSYREALGDPWDNIEEKYKVGEIVD 372 Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 V + + + + + + ++ + + ++K Sbjct: 373 GKVVKVLPTGAIVELEEYVSGFVPVSEMSWNFVDRVEDVVKESSEVKTKIL-----SIDK 427 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSL 683 R R K A + +L+ G +EG +T + GA V + + + S + Sbjct: 428 ENRRMRLSLKQATEDPWQKVHTELKVGDYVEGKITRLIKSGAVVMVDGYGVEAFLPASQV 487 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEV--DLQR--KRIALTMRLDEQPGETNARRGGGNE 737 + K VE+ +K G+ + K++ + D ++ + + ++++ E + E Sbjct: 488 AMKRVENLEDAIKIGEHRRFKIIRLVYDPEKDVRNMVVSIKQLLLDKEKEETQKALEE 545 Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 5/68 (7%) Query: 647 DLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVL 706 D + G V ++ G V + DG S L P GD ++V+++ Sbjct: 26 DERRGRSKTAEVHSIQPDGLLVILEGKLDGFAPESEL-----VKPLKEYNIGDKIEVQIM 80 Query: 707 EVDLQRKR 714 +VD R Sbjct: 81 KVDEDEGR 88 >UniRef50_B2UME1 Ribosomal protein S1 n=6 Tax=Chlamydiae/Verrucomicrobia group RepID=B2UME1_AKKM8 Length = 562 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 4/191 (2%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 A + + Y + ++ S K + ++ Sbjct: 348 WADIESRFPIGTVIKGQVRNLTPYGAFVGLEEGI----DGMIHVSDMSWTRKINHPSEVL 403 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V I+ E++K + K + + + G ++ G V + +FGAFV+ Sbjct: 404 KKGDEVEAIVLEIKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFGAFVN 463 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + DGL+HIS LS VE V+K GD + +V++VD +RI L+++ E Sbjct: 464 LDGDIDGLIHISQLSEDHVERVKDVIKVGDEITARVIKVDSIERRIGLSIKAVNYDTEQL 523 Query: 730 ARRGGGNERPQ 740 R E + Sbjct: 524 RRETASFEALR 534 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 38/235 (16%), Positives = 86/235 (36%), Gaps = 13/235 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + D +R+++++ R +Q FL + ++ + + Sbjct: 149 KIVKVNDDRKNIVLSRREVIEAER-----ADQRQRFLETVKEGDKVEGIVKNITDFGAFV 203 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + M + + ++ ++ +I E+++ K Sbjct: 204 DLRGMDGLLHITDMSWG------RVNHPSEMLHIGQSLEVVILEVDREKERVSLGLKQMT 257 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + ++G VT + +GAFV++ +GLVH+S LS K + P V+K Sbjct: 258 DNPWADIERKYPINSHVKGRVTKLLPYGAFVELEKGVEGLVHVSELSWVKRITRPSDVLK 317 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++ VL + ++ ++I+L +R L++ P R + P G Sbjct: 318 LDQEIEAVVLSISVKEQKISLGVRQLEDNPWADIESRFPIGTVIKGQVRNLTPYG 372 Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 74/180 (41%), Gaps = 6/180 (3%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 Y + ++ ++ L+ S + + +D + ++ + + Sbjct: 284 YGAFVEL----EKGVEGLVHVSELSWVKRITRPSDVLKLDQEIEAVVLSISVKEQKISLG 339 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDP 691 + + + + G +++G V N+T +GAFV + DG++H+S +S + P Sbjct: 340 VRQLEDNPWADIESRFPIGTVIKGQVRNLTPYGAFVGLEEGIDGMIHVSDMSWTRKINHP 399 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNRPAAKPRG 750 V+K GD V+ VLE+ + +R++L ++ E P E+ R + G Sbjct: 400 SEVLKKGDEVEAIVLEIKKEDQRVSLGIKQLESDPWESINDRFKVGDMVTGQVAKIASFG 459 Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 74/173 (42%), Gaps = 3/173 (1%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 ++ + +++ + + V + + + R + + Sbjct: 115 LMVNVGVEAFLPGSQVDIIPPRDLNEYVGKVYEFKIVK-VNDDRKNIVLSRREVIEAERA 173 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + ++ G +EG V N+T+FGAFVD+ DGL+HI+ +S V P ++ G Sbjct: 174 DQRQRFLETVKEGDKVEGIVKNITDFGAFVDL-RGMDGLLHITDMSWGRVNHPSEMLHIG 232 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 ++V +LEVD +++R++L ++ + + P R+ N + P G Sbjct: 233 QSLEVVILEVDREKERVSLGLKQMTDNPWADIERKYPINSHVKGRVTKLLPYG 285 >UniRef50_B0SDL5 30S Ribosomal protein S1 n=6 Tax=Leptospira RepID=B0SDL5_LEPBA Length = 566 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 46/227 (20%), Positives = 86/227 (37%), Gaps = 13/227 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I +R+ LL G K L + ++ V + V Sbjct: 165 KIIELNEKTRTGVVSRKTLLD-EINGEK----WEELLGKVKVGDKVNGKVVKIANFGVFL 219 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + ++ + + + E V I+ E++K K Sbjct: 220 SVYDVVGLLRQNDISYKKFAPFKQYFNIGAE------VEVIVLEVDKENNKLSLGIKQLY 273 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 +L+ GM++ G VT++TNFGAFV++ +GL+H + LS K P V+K Sbjct: 274 EDPWAWAKKELEKGMVVRGIVTSLTNFGAFVELKEGLEGLIHTTELSWAKKPPHPKDVLK 333 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 G V ++L++D + +R++L ++ L P E + + Sbjct: 334 KGQEVDSEILDIDFEARRLSLGLKQLLPNPWEALSANVRAGNVLEGK 380 Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats. Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 7/216 (3%) Query: 530 FQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKD 589 F+ R+ L + +L P +E + N L+ Y + + + Sbjct: 347 FEARRLSLGLKQLLPNPWEALSA---NVRAGNVLEGKITGITKYGAFVEVESGI----EG 399 Query: 590 LMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQ 649 L+ S + K + + +V I ++ + K Sbjct: 400 LIHISDITWDEKEKNPLNLLKKGQSVQYKILDVNLDAQRISCGLKQLSEHPYEALRKKYP 459 Query: 650 PGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVD 709 PG ++EG V ++ +FG FV++ +GLVHIS + + + K GD V+ V++++ Sbjct: 460 PGTLVEGRVKSIVSFGVFVEVEPGYEGLVHISEIPDGRNIKLEDLYKVGDSVRTVVVKIE 519 Query: 710 LQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPA 745 K+I+L+++ ++ E E Q +R + Sbjct: 520 PNNKKISLSIKDFDKAVEREEMAKYMKEDNQPSRES 555 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 2/165 (1%) Query: 588 KDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND 647 + L+ + K D V I +++ R K + Sbjct: 311 EGLIHTTELSWAKKPPHPKDVLKKGQEVDSEILDIDFEARRLSLGLKQLLPNPWEALSAN 370 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFV-EDPHTVVKAGDIVKVKVL 706 ++ G +LEG +T +T +GAFV++ +GL+HIS ++ ++P ++K G V+ K+L Sbjct: 371 VRAGNVLEGKITGITKYGAFVEVESGIEGLIHISDITWDEKEKNPLNLLKKGQSVQYKIL 430 Query: 707 EVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +V+L +RI+ ++ L E P E ++ + + G Sbjct: 431 DVNLDAQRISCGLKQLSEHPYEALRKKYPPGTLVEGRVKSIVSFG 475 >UniRef50_B8G2Q3 Hydroxymethylbutenyl pyrophosphate reductase n=2 Tax=Desulfitobacterium hafniense RepID=B8G2Q3_DESHD Length = 661 Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats. Identities = 45/213 (21%), Positives = 78/213 (36%), Gaps = 6/213 (2%) Query: 508 RVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAST 567 V L + Q + E + R L + L + + L + + Sbjct: 419 YVEDLNQFKGQTLRLRVIEFDPAKRRVVLSQKEILQEEQAAKKEHLLATLQEGDVVSGVV 478 Query: 568 VHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR 627 + I + + S++ + ++ V I +++K Sbjct: 479 KRLAQFGAFVDIGGVDG------LLHVSDIAYTRIKHPSEYVNVGDEVEVQILKVDKEQG 532 Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 K + + G ++ G V + FGAFV + D L+HIS LS K Sbjct: 533 KISLGLKQLKPSPWESAPEKYALGSLVTGKVVRIAPFGAFVQLEDGIDALIHISQLSEKR 592 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 V VVK GD+V+ KV+E + KRI+L++R Sbjct: 593 VNKVEDVVKVGDMVQAKVIECKPEEKRISLSIR 625 Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 2/134 (1%) Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 + ++ +++ E D E M +L G ++ G V + + FVD+G Sbjct: 263 IIEEVYRKMSTMENKETHEMM--NMEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWK 320 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 +G++ + L+ +V GD + VL V+ + L+ R ++ + + Sbjct: 321 SEGVIALKELTVASDLQTSDIVAIGDQISAVVLRVENEEGNPVLSKRRADEMAAVDKLKE 380 Query: 734 GGNERPQNNRPAAK 747 + + A Sbjct: 381 LAESKEEIQGKVAD 394 Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 29/200 (14%), Positives = 66/200 (33%), Gaps = 8/200 (4%) Query: 547 FEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFT 606 E A ++ H + + V V + ++ + + Sbjct: 285 MEDWAEGMQNLHRGALVTGTVVKINHDEVFVDLGWKSEGVIALKELTVASDLQTSDIVAI 344 Query: 607 DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGA 666 ++ + +E P R + A E + ++G V +V G Sbjct: 345 GDQISAVVLRVENEE-GNPVLSKRRADEMAAVDKLKELAESKEE---IQGKVADVVKGGL 400 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPG 726 VD+ G V S + +VED + G ++++V+E D ++R+ L+ + Q Sbjct: 401 IVDV--GMRGFVPASQIQPGYVEDLNQF--KGQTLRLRVIEFDPAKRRVVLSQKEILQEE 456 Query: 727 ETNARRGGGNERPQNNRPAA 746 + + + + + Sbjct: 457 QAAKKEHLLATLQEGDVVSG 476 >UniRef50_A4SGB6 SSU ribosomal protein S1P n=12 Tax=Chlorobiaceae RepID=A4SGB6_PROVI Length = 602 Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 8/199 (4%) Query: 554 LRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP 613 L L+ + + + + + + + + ++ Sbjct: 222 LDSIKVGMVLEGTVKNITDFGIFVDLGGLDGLVHITDITWG------RINHPSEVVDLDQ 275 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 + ++ ++ + K + G +G V ++T++GAFV+I Sbjct: 276 PIKVVVVGFDENTKRVSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKG 335 Query: 674 QDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 +GLVHIS +S + ++ P V G V+ +L +D +++L+M+ ++E P + Sbjct: 336 IEGLVHISEMSWTQHIKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSE 395 Query: 732 RGGGNERPQNNRPAAKPRG 750 + N R + G Sbjct: 396 KYVENTRHKGTVSNITDFG 414 Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 38/315 (12%), Positives = 95/315 (30%), Gaps = 17/315 (5%) Query: 458 VKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVAGLT---- 513 V + K + +++ + + K V + + L ++ ++ Sbjct: 291 VSLGMKQLEAHPWENIELKYPVGSKAQGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQH 350 Query: 514 -RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ--CAGFLRINHGDNPLDASTVHP 570 + Q + ++ N + L K + + + + Sbjct: 351 IKHPGQFVTLGQEVECVILNIDKDHTKLSLSMKRVNEDPWIALSEKYVENTRHKGTVSNI 410 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 + V + + + L+ S K ++ + + + + R Sbjct: 411 TDFGVFVEL----EPGVDGLVHISDLSWTKKIRHPSELVKKNQELEVKVLKFDVHARRIA 466 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K G ++ + G V + DG V + L V+D Sbjct: 467 LGHKQMNPDPWGGFEQQYAVGAESSAEISQIIEKGVIVILPGDVDGFVPATHLLQGGVKD 526 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTM------RLDEQPGETNARRGGGNERPQNNRP 744 H+ K GD + ++V+E D + KRI L+ + E+ + ++ Sbjct: 527 IHSSFKIGDALPLRVIEFDKENKRIILSALEYFKDKSKEEIESYLQAHPNEKKEIEDATA 586 Query: 745 AAKPRGREAQPAGNS 759 +P+ + ++ G+ Sbjct: 587 ELEPQPKSSEKKGDK 601 >UniRef50_Q5HFU7 30S ribosomal protein S1 n=61 Tax=Staphylococcus RepID=RS1_STAAC Length = 391 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 11/224 (4%) Query: 525 DENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQ 584 + N +R+ + + K L+ + + +D + I Sbjct: 164 ENNRVILSRKAVEQEENDAKK-----DQLLQSLNEGDVIDGKVARLTQFGAFIDIGGVDG 218 Query: 585 QALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVET 644 + + + + V IK +++ K Sbjct: 219 LVHVSELSHEHVQTPEEVVSIGQD------VKVKIKSIDRDTERISLSIKDTLPTPFENI 272 Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 ++EG V + NFGAFV+I GLVHIS +++K + P V++ G V VK Sbjct: 273 KGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLVHISEIAHKHIGTPGEVLEPGQQVNVK 332 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 +L +D + +R++L+++ + + N P Sbjct: 333 ILGIDEENERVSLSIKATLPNEDVVESDPSTTKAYLENEEEDNP 376 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 6/137 (4%) Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFAD----GVETMNDLQPGMILEGAVTNVTNFG 665 F T+ ++EL+ K + + + + L G +++G V +T FG Sbjct: 149 FDGQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFG 208 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQ 724 AF+DIG DGLVH+S LS++ V+ P VV G VKVK+ +D +RI+L+++ Sbjct: 209 AFIDIG-GVDGLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDTLPT 267 Query: 725 PGETNARRGGGNERPQN 741 P E + N+ + Sbjct: 268 PFENIKGQFHENDVIEG 284 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ-DGLVHISSLSNKFVEDPHTVVKAGDIVK 702 +ND++ G + G V V + V I + +G++ IS LS ++ P VVK GD V+ Sbjct: 9 MINDIKEGDKVTGEVQQVEDKQVVVHINGGKFNGIIPISQLSTHHIDSPSEVVKEGDEVE 68 Query: 703 VKVLEV--DLQR--KRIALTMRLDE 723 V +V D + L+ R E Sbjct: 69 AYVTKVEFDEENETGAYILSRRQLE 93 >UniRef50_O06000 30S ribosomal protein S1 homolog n=76 Tax=Bacillaceae RepID=RS1H_BACC1 Length = 382 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 12/211 (5%) Query: 513 TRMMAQNIVAW-RDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + +A IV R++N + + ++++ K + + ++ + Sbjct: 146 GKTLAVKIVELDREKNRVILSHKAVVELELDSKK-----KEAISSLKEGDVVEGTVQRLT 200 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + + + + + ++ V + ++ + Sbjct: 201 DFGAFVNVGGVDGLVHISQISH------ERVEQPSEVLEQGQKVKVKVLSVDADTQRISL 254 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K AQ +++ G I EG V + FGAFV+I +GLVH+S ++N+ V++P Sbjct: 255 SIKAAQPGPWENIAGEVKAGDIREGIVKRLVTFGAFVEILPGVEGLVHVSQIANRHVKNP 314 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 + V++ G VKVKVLEV + KRI+L+++ Sbjct: 315 NEVLEMGQEVKVKVLEVHVAEKRISLSIKEA 345 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 8/150 (5%) Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF----ADGVETMNDLQPGM 652 + DFTD + T+ I EL++ K + E ++ L+ G Sbjct: 133 VEVHYVEDFTD--YKGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEAISSLKEGD 190 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 ++EG V +T+FGAFV++G DGLVHIS +S++ VE P V++ G VKVKVL VD Sbjct: 191 VVEGTVQRLTDFGAFVNVG-GVDGLVHISQISHERVEQPSEVLEQGQKVKVKVLSVDADT 249 Query: 713 KRIALTMRLDEQ-PGETNARRGGGNERPQN 741 +RI+L+++ + P E A + + Sbjct: 250 QRISLSIKAAQPGPWENIAGEVKAGDIREG 279 Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 62/208 (29%), Gaps = 15/208 (7%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 + + + S E V+ + T + + + D+ + Sbjct: 13 KELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVVELDQILELKI 72 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 + +L R +E G + + V ++ N G VD+ Sbjct: 73 IKLEENDLVLSKRAVD------AEKAWIELQEKFTSGHVFDVTVKDIVNGGLVVDL--GV 124 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-----DEQPGETN 729 G + S + +VED G + VK++E+D ++ R+ L+ + + + Sbjct: 125 RGFIPASLVEVHYVEDFTDY--KGKTLAVKIVELDREKNRVILSHKAVVELELDSKKKEA 182 Query: 730 ARRGGGNERPQNNRPAAKPRGREAQPAG 757 + + G G Sbjct: 183 ISSLKEGDVVEGTVQRLTDFGAFVNVGG 210 Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 4/101 (3%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + V +LQ G ++ G+VT V V++G DG++ IS L+N +E VV+ Sbjct: 6 NEEVMDSKELQVGDVVTGSVTKVEEKQVLVNVGYKTDGVIPISELANVHIEKASDVVELD 65 Query: 699 DIVKVKVLEVDLQRKRIALTMRL--DEQPGETNARRGGGNE 737 I+++K+++++ + L+ R E+ + Sbjct: 66 QILELKIIKLEEND--LVLSKRAVDAEKAWIELQEKFTSGH 104 >UniRef50_A7HME7 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HME7_FERNB Length = 854 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 74/209 (35%), Gaps = 7/209 (3%) Query: 544 PKAFEQCAG-FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 K F++ F + ++ +I T + + + + K Sbjct: 471 KKLFQKLIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAK- 529 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 D + +IKE+ + K Q G + G VT+V Sbjct: 530 ----DALTVGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVK 585 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 FG FV I +G V I + + + VV D VKV++LE++ +++++ L+ + Sbjct: 586 PFGFFVKIEDGVEGFVPIEEVFWGRKGNINEVVSINDFVKVQILEINPEKRQMKLSYKSV 645 Query: 723 -EQPGETNARRGGGNERPQNNRPAAKPRG 750 P E A++ + + P G Sbjct: 646 IGDPWEKIAKKLSEGDISEGKVAKVLPNG 674 Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats. Identities = 44/240 (18%), Positives = 87/240 (36%), Gaps = 14/240 (5%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + ++M I E + LL + L P +E A +I + + Sbjct: 534 VGKIMKFLIKEINPERKRI-----LLSLKALLPDPWENVAKKYQI---GQTVTGVVTSVK 585 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + +I + + N+ ++ V + E+ R + Sbjct: 586 PFGFFVKIEDGVEGFVPIEEVFWGRKGNINEVVSINDFVKVQIL-----EINPEKRQMKL 640 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 +K+ + L G I EG V V G ++I +IS +S FV++ Sbjct: 641 SYKSVIGDPWEKIAKKLSEGDISEGKVAKVLPNGVIIEIEPEVTAFCNISEVSWNFVDNI 700 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 V+K G+ VK +VL++D + K+I +++ + P + A + + A +G Sbjct: 701 EDVIKEGESVKFQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGDIIKVKVIKAVEKG 760 Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 71/178 (39%), Gaps = 1/178 (0%) Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 ++ERI + L++++ + + I E + Sbjct: 411 KIIERIKGGYRVILENVVEAFLPGSESNIREDEEIPREKMQFAVISYETRGRKTNIVVSR 470 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K E ++ +PG ++EG V ++++ GAFV I G + S +S Sbjct: 471 KKLFQKLIDEFFSNRKPGDVVEGIVESISDNGAFVKIAGITTGFIPNSEISYNTSIKAKD 530 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + G I+K + E++ +RKRI L+++ L P E A++ + + KP G Sbjct: 531 ALTVGKIMKFLIKEINPERKRILLSLKALLPDPWENVAKKYQIGQTVTGVVTSVKPFG 588 Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 15/190 (7%) Query: 565 ASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK 624 VH E+ + I + + S ++ + + + Sbjct: 230 GKAVHIESINEINEIEEMLFREKSKDIQTIKIGLISGTSTYSKDVEHILKYLVKNYGGRE 289 Query: 625 PGRDPRPEFKTAQFADGVETMNDLQP-------GMILEGAVTNVTNFGAFVDIGVHQDGL 677 + K + E + G I+EG VT +T G +D+G G+ Sbjct: 290 LYMEDLNNLKQEVLEESFEQLLKEHENMNQVGRGKIVEGIVTEITPTGLTIDLGGKVTGV 349 Query: 678 VHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 V + L + K G+ +KV+V +++ + L+ + +P E Sbjct: 350 VPLEELFKE-----LNEYKVGEQIKVRVEKINEEDGTAILSAK---KPMEKIIFDEIQKA 401 Query: 738 RPQNNRPAAK 747 + + K Sbjct: 402 KENGKPVSGK 411 Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 53/147 (36%), Gaps = 11/147 (7%) Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 N SE+ + D +V + +++ + R + A+ N + G Sbjct: 688 NISEVSWNFVDNIEDVIKEGESVKFQVLKIDPENKKIRVSIRKAKPNPWKAFANAHKEGD 747 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I++ V G ++ + + + S + + GD + K+++++ Q+ Sbjct: 748 IIKVKVIKAVEKG-YIGLCEEIEVYIPKSQ--------VYENLNLGDEIDGKIIKLEEQK 798 Query: 713 K--RIALTMRLDEQPGETNARRGGGNE 737 +I ++ + E TN E Sbjct: 799 DIYKIIVSPKAYENSLATNKNESKDFE 825 >UniRef50_A4IQA6 30S ribosomal protein S1 n=10 Tax=Bacillaceae RepID=A4IQA6_GEOTN Length = 387 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 54/255 (21%), Positives = 96/255 (37%), Gaps = 8/255 (3%) Query: 491 VNAVGVDLNT-ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQ 549 V VGV AS+ V + + + E + +NR L + + + Q Sbjct: 123 VADVGVRGFIPASLVEPHYVEDFSDYKGKTLTVKVVELDREKNRVILSHRAVVEEEQERQ 182 Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 L LD + V + + ++ + + ++ Sbjct: 183 QKELLSRLEAGQVLDGVVRRIADFGVFVDVGGFDGLVHISQLSHT------RVAHPSEVV 236 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V + ++ K A ++P ++ G V + +FGAFV+ Sbjct: 237 KEGDAVKVKVLAVDPEQGRLSLSIKEALPGPWEGISEKVKPSDVVTGTVKRLASFGAFVE 296 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 I +GLVH+S ++N+ + PH V+K GD VK KVL+V+ RI+L++R L E+ Sbjct: 297 IFPGVEGLVHVSQIANRRIGSPHEVLKEGDEVKAKVLDVNEAEHRISLSIRALLEEETAA 356 Query: 729 NARRGGGNERPQNNR 743 A + R Sbjct: 357 PAEDYSQYTKVAETR 371 Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%) Query: 650 PGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEV 708 I+ G V + + V++ Q G++ IS LSN +E P V GD V KV +V Sbjct: 14 VDDIVRGKVVKLEDKQVLVEVENSKQSGIIPISELSNLHIEKPSDAVAVGDEVTAKVKKV 73 Query: 709 ----DLQRKRIALTMRL--DEQPGETNARRGGGNE 737 D + + L+ + E+ E R+ E Sbjct: 74 EEGKDGEEGLLILSKKAVDAERAWEELERKFASGE 108 >UniRef50_C4V2L6 Possible 30S ribosomal protein S1 n=2 Tax=Selenomonas RepID=C4V2L6_9FIRM Length = 370 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 50/241 (20%), Positives = 94/241 (39%), Gaps = 17/241 (7%) Query: 501 ASVPLLTRVAGLTRMM-----AQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS L V L+ + A+ I + +R++LL+ R E+ Sbjct: 130 ASQMELHFVKDLSVYVDQTVEAEIIEIDVQKRRLVLSRRKLLERDR-----AEKEEAVFS 184 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 + + + Y I + + S+L + ++ + Sbjct: 185 AIEPEQIVRGTVKRLVDYGAFIDIGGVDG------LAHISDLAWHRVKHPSEVLEVGQEL 238 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 +K +++ + K +E G +EG + +T+FGAF++I D Sbjct: 239 DVYVKSVDRDTKRISLSVKDTLPDPWIEKAEKYAEGDFIEGKIIKLTDFGAFMEIEPGFD 298 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM-RLDEQPGETNARRGG 734 GL+ + L+ K +E V GDIV VKVL +D +RKRI+L++ + + ++ Sbjct: 299 GLIPMGELAEKRIERADEAVHTGDIVIVKVLRIDTKRKRISLSITKAKRDADSADIKKYE 358 Query: 735 G 735 G Sbjct: 359 G 359 Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 6/148 (4%) Query: 589 DLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD---GVETM 645 R+L D + V +I ++ G D + + Sbjct: 37 YKQEIPVSKRDLAVPAPDDARDVVKVGDEIDVYIKSLGGDNGGSLSKVEADKMAAWKDIE 96 Query: 646 NDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKV 705 + G +E V G V + G + S + FV+D V V+ ++ Sbjct: 97 VIKEKGETVEAKVAKEVKGGL-VAYVMGLRGFIPASQMELHFVKDLS--VYVDQTVEAEI 153 Query: 706 LEVDLQRKRIALTMRLDEQPGETNARRG 733 +E+D+Q++R+ L+ R + Sbjct: 154 IEIDVQKRRLVLSRRKLLERDRAEKEEA 181 >UniRef50_D1VSI0 4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VSI0_9FIRM Length = 725 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 44/253 (17%), Positives = 99/253 (39%), Gaps = 11/253 (4%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I + + +R+ +L E+ + H + ++ + + Sbjct: 428 EIIDFDKRKRRIVLSRKNVLMRELE-----EKRSQIFESLHIGDVIEGTVQRLTNFGAFV 482 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 I + + SEL + ++ V + L++ K Sbjct: 483 DIGGIDG------LVHISELSWNRVKHPSEVVSAGDKVKVQVLSLDEEKDRIALGLKQTT 536 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 + +N ++ G +++G V N+ +FGAFV + DGL+H+S + + +E P ++ Sbjct: 537 EKPWDKFINAVKVGDVVKGKVVNILDFGAFVRLEEGVDGLLHVSQICREHIEKPQDRLEI 596 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 G V+VKV+E+D + K+I+L+++ +P E + + + +P+ + Sbjct: 597 GQEVEVKVIEIDQENKKISLSIKALLEPIEDDENKEKTEKPKVKKERPRRPKENRVKKQI 656 Query: 758 NSAMMDALAAAMG 770 D +G Sbjct: 657 QEPKEDEFNTTIG 669 Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 59/166 (35%), Gaps = 5/166 (3%) Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 + E + + ++ LK + G T +IKE + Sbjct: 217 KLAEVAKESCKNVFLIQSIKDIDINILKKFNKIGITAGASTPDKVIKEAVSSMENFD--- 273 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K + ++ G I+ G V VT+ V++G DG++ LS P Sbjct: 274 KGEMMEAIDNSFKRIKKGEIVTGEVLYVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSD 333 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP--GETNARRGGGNE 737 + K GD ++V VL++D + L+ R E + +E Sbjct: 334 LYKQGDEIEVFVLKMDDGDGNVVLSARRVEDMKVWDEIEESYNNHE 379 Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 8/183 (4%) Query: 573 YPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPE 632 Y ++ ++ +N A K G ++K + G Sbjct: 300 YVTDNEVMVNLGYRSDGIISKEELSKNTDAKPSDLYKQGDEIEVFVLKMDDGDGNVVLSA 359 Query: 633 FKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 + E I+ V N G + + S ++ KF D Sbjct: 360 RRVEDMKVWDEIEESYNNHEIVTAKVINQVKGGLTASLD-GISAFIPASHVTVKFQRDLS 418 Query: 693 TVVKAGDIVKVKVLEVDLQRKRIALT-----MRLDEQPGETNARRGGGNERPQNNRPAAK 747 GD + ++++ D +++RI L+ MR E+ + + Sbjct: 419 KF--VGDDFQCEIIDFDKRKRRIVLSRKNVLMRELEEKRSQIFESLHIGDVIEGTVQRLT 476 Query: 748 PRG 750 G Sbjct: 477 NFG 479 >UniRef50_UPI00016C5864 30S ribosomal protein S1 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C5864 Length = 546 Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats. Identities = 47/225 (20%), Positives = 87/225 (38%), Gaps = 16/225 (7%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWR-----DENGQFQNRQQLLKVSRLGPKAFEQCAGFLR 555 AS L RV + + + Q + +E +R+ +L+ + + F R Sbjct: 282 ASQLDLYRVENVDQFVGQRLKVMVSEVNPEERNLIVSRRAVLEREKQ-----VKAEEFWR 336 Query: 556 INHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTV 615 D + + + A + SE + +D + V Sbjct: 337 TVEKDQVRKGIVRSVKPFGAFVDLGGADG------LIPVSEFSWQRVNDLNEVVKIGQEV 390 Query: 616 TDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQD 675 I +++ R + + E Q G + G V+ + +FGAFV++ + Sbjct: 391 EVKISKIDFEARKIGLSMRALTTSPFEEFTKTTQAGARVTGKVSRLADFGAFVELAPGLE 450 Query: 676 GLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 GL+H+S LS + V V++ G V V++L D KRIAL+++ Sbjct: 451 GLIHVSELSTQRVRRVSDVIEPGQNVIVEILSTDPVTKRIALSLK 495 Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 5/117 (4%) Query: 642 VETMNDLQPGMILEGAVTNVTNFGAFVDIGV-HQDGLVHISSLSNKFVEDPHTVVKAGDI 700 V + GM++E VT + I V G + S L VE+ G Sbjct: 243 VHDWTQVTYGMVVEAKVTGTNKNKTGLTIEVAGIKGFLPASQLDLYRVENVDQF--VGQR 300 Query: 701 VKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 +KV V EV+ + + + ++ R + + + R K R +P G Sbjct: 301 LKVMVSEVNPEERNLIVSRRAVLEREKQV--KAEEFWRTVEKDQVRKGIVRSVKPFG 355 >UniRef50_Q1NY10 RNA binding S1 n=3 Tax=Deltaproteobacteria RepID=Q1NY10_9DELT Length = 410 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 22/272 (8%) Query: 512 LTRMMAQNIVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 L + + I+ +R+ +R+QLL+ R K EQ L++ + + + Sbjct: 146 LGQSFSFLIMEFREGGKNILLSRRQLLEQERQELK--EQLRQSLKV---GDLVTGTVTSV 200 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 + I +G + D V +K L+ Sbjct: 201 RDFGAFVDIGGIEGLIPISEIGWG------RVEDIHSHLEPGRQVEVAVKSLDWEKDRYS 254 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL-SNKFVE 689 K + G G V +T+FGAFV + DGLVHIS L + + + Sbjct: 255 LSLKDTLPDPWEQAAVSFPEGSTQRGRVARLTDFGAFVTLAPGVDGLVHISKLGAGRRLN 314 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERP----QNNRPA 745 P VV+ GD ++V+V VD+++KRI+L + E + P + RPA Sbjct: 315 HPREVVQVGDELEVRVEAVDVEQKRISLAVAPPTGSAEPETPYAIPADAPLAAATDKRPA 374 Query: 746 AKPRGREAQPAGNS-----AMMDALAAAMGKK 772 A +G + A S + + L A M K Sbjct: 375 AGDQGGQRPAAAKSQPAMGTLGELLQAKMQDK 406 >UniRef50_B5YEY5 Ribosomal protein S1, putative n=2 Tax=Dictyoglomus RepID=B5YEY5_DICT6 Length = 552 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 74/199 (37%), Gaps = 8/199 (4%) Query: 553 FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 F + + A + +V ++ + + D+ Sbjct: 272 FKEKYPEGSIIKAEIIKISG-GIVVKVDNLIGYVPMSEISWGRPQDVKNSLKVGDK---- 326 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 V + ++ + K + + + G I+ G VTN+T+FG F++I Sbjct: 327 --VKAKVLSVDDLNQKIFLSIKQVEPNPWEVIDQNYKIGEIVSGKVTNITDFGIFIEIKP 384 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 +GL+ +S + + + + K GD ++ K++E+D + K++ L+ R L + P E Sbjct: 385 GLEGLIPRKLISWERISNISDIFKPGDFIEAKIIEIDKENKKLTLSRRDLLKDPWEDIDE 444 Query: 732 RGGGNERPQNNRPAAKPRG 750 + + + G Sbjct: 445 KYREGQNIKGRIIEKLKDG 463 Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 32/199 (16%), Positives = 65/199 (32%), Gaps = 8/199 (4%) Query: 553 FLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGV 612 + + + + + ++ + ++N++ Sbjct: 186 LWEKIKNSQIVRGRIIKVDEDKLTVDLGLGIIGIVEKDEISWFPIKNIRR-----YYNTG 240 Query: 613 PTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 V + L++ R + K AQ G I++ + + + G V + Sbjct: 241 DIVKARVLSLDENSRTAQLSIKQAQPNPWSLFKEKYPEGSIIKAEIIKI-SGGIVVKVDN 299 Query: 673 HQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNAR 731 G V +S +S +D +K GD VK KVL VD ++I L+++ + P E + Sbjct: 300 LI-GYVPMSEISWGRPQDVKNSLKVGDKVKAKVLSVDDLNQKIFLSIKQVEPNPWEVIDQ 358 Query: 732 RGGGNERPQNNRPAAKPRG 750 E G Sbjct: 359 NYKIGEIVSGKVTNITDFG 377 Score = 81.7 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 23/209 (11%), Positives = 73/209 (34%), Gaps = 15/209 (7%) Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY 573 ++ A+ + F + +Q + P +E + + + + Sbjct: 326 KVKAKVLSVDDLNQKIFLSIKQ------VEPNPWEVID---QNYKIGEIVSGKVTNITDF 376 Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 + I + + + + S+ +D + I E++K + Sbjct: 377 GIFIEIKPGLE-----GLIPRKLISWERISNISDIFKPGDFIEAKIIEIDKENKKLTLSR 431 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 + + + G ++G + G V++ +G + + ++ + E+ Sbjct: 432 RDLLKDPWEDIDEKYREGQNIKGRIIEKLKDGYIVELEPGIEGFLPYTQINFEK-ENEIQ 490 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 K + V+ K+++++ + +RI L+++ Sbjct: 491 GFKENEEVEAKIVKINPRFRRITLSIKAL 519 Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 6/197 (3%) Query: 544 PKAFEQ--CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLK 601 KA E L + P+ + Y IL + + ++ +K Sbjct: 87 KKAVENKIWEELLWAYENNQPIQGKVI---NYNGRGFILEINNEVEGFIPAKEIDVPPIK 143 Query: 602 ASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNV 661 + + + I E + R + Q + ++ I+ G + V Sbjct: 144 PPKYYINRRIEGKIKRINPEKNQLIISARELLEQKQEEERSNLWEKIKNSQIVRGRIIKV 203 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR- 720 VD+G+ G+V +S +++ GDIVK +VL +D + L+++ Sbjct: 204 DEDKLTVDLGLGIIGIVEKDEISWFPIKNIRRYYNTGDIVKARVLSLDENSRTAQLSIKQ 263 Query: 721 LDEQPGETNARRGGGNE 737 P + Sbjct: 264 AQPNPWSLFKEKYPEGS 280 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 13/97 (13%), Positives = 36/97 (37%), Gaps = 2/97 (2%) Query: 624 KPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 K G K + E + + ++G V N G ++I +G + + Sbjct: 78 KDGVITVSNKKAVENKIWEELLWAYENNQPIQGKVINYNGRGFILEINNEVEGFIPAKEI 137 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 ++ P ++ K+ ++ ++ ++ ++ R Sbjct: 138 DVPPIKPPKYY--INRRIEGKIKRINPEKNQLIISAR 172 >UniRef50_B5Y9T3 Ribosomal protein S1 n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y9T3_COPPD Length = 559 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 76/179 (42%), Gaps = 5/179 (2%) Query: 564 DASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELE 623 + + V+ + V + + + + + D + V ++ + Sbjct: 369 EGTVVNITDFGVFVELAPGIE-----GLVPRRYVSWKRFKDINEVVNIGDQVEVVVLGIN 423 Query: 624 KPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 R + + E + ++QPG ++ G V + G FV+I +G +HIS L Sbjct: 424 IVDRKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQGVFVEIADGVEGFIHISQL 483 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNN 742 S + V+DP V GD + KV+ +D +R+RI+L+++ E + +++ ++ Sbjct: 484 SIRRVDDPRDAVSEGDEIVAKVIGIDEERRRISLSVKAIHVDKEREELQDFLSQQGEDK 542 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 40/159 (25%), Positives = 65/159 (40%), Gaps = 1/159 (0%) Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 + E+ + + D V I + +D K A D G Sbjct: 307 PAQEVSWKRGAKVEDLYKIGDHVKAKILRFDPEAQDLILSVKEALGDPWENVERDFPVGS 366 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 EG V N+T+FG FV++ +GLV +S K +D + VV GD V+V VL +++ Sbjct: 367 KAEGTVVNITDFGVFVELAPGIEGLVPRRYVSWKRFKDINEVVNIGDQVEVVVLGINIVD 426 Query: 713 KRIALTMRLD-EQPGETNARRGGGNERPQNNRPAAKPRG 750 ++I L+MR P E + + + P+G Sbjct: 427 RKITLSMRDTRPDPWEEVVKNIQPGQLVRGKVVTIIPQG 465 Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 5/143 (3%) Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMND----LQPGMILEGAVTNV 661 +K+ ++ I + + + + E L+ I+ G V+ + Sbjct: 145 DTKKYVGRSLRVKILRVNRKRNQIILTQRQVLEEEQKERAEKAWLRLKDSDIVRGHVSRI 204 Query: 662 TNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 T+ G FVD+G +G V L + +++ V + GD+V+ KVL VD ++K + L++RL Sbjct: 205 TDEGIFVDLGDGIEGFVPKDELDWRPIKNIAKVFRRGDVVRAKVLSVDEEKKEMVLSIRL 264 Query: 722 -DEQPGETNARRGGGNERPQNNR 743 P + A + + Sbjct: 265 ATPNPWQLFAEKHNVGDVVSGRV 287 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 7/251 (2%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS + V + + +++ + +N+ L + L + E+ Sbjct: 135 ASQLEIRFVRDTKKYVGRSLRVKILRVNRKRNQIILTQRQVLEEEQKERAEKAWLRLKDS 194 Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 + + + + + + + ++N+ V + Sbjct: 195 DIVRGHVSRITDEGIFVDLGDGIEGFVPKDELDWRPIKNI-----AKVFRRGDVVRAKVL 249 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 +++ ++ + A G ++ G V G + + GLV Sbjct: 250 SVDEEKKEMVLSIRLATPNPWQLFAEKHNVGDVVSGRVLRYLRGGLLLLVDR-VTGLVPA 308 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERP 739 +S K + K GD VK K+L D + + + L+++ P E R + Sbjct: 309 QEVSWKRGAKVEDLYKIGDHVKAKILRFDPEAQDLILSVKEALGDPWENVERDFPVGSKA 368 Query: 740 QNNRPAAKPRG 750 + G Sbjct: 369 EGTVVNITDFG 379 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 4/167 (2%) Query: 606 TDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP-GMILEGAVTNVTNF 664 E +V ++ K A + + + + + G + + Sbjct: 60 VQEGNVPTSVEVVVTRTNDDKGYISVSQKRAAYRKLWKDVEEWEKSGESRKVKAVGADDK 119 Query: 665 GAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQ 724 G FVD+G G V S L +FV D G ++VK+L V+ +R +I LT R + Sbjct: 120 GVFVDLGAGILGYVPASQLEIRFVRDTKKY--VGRSLRVKILRVNRKRNQIILTQRQVLE 177 Query: 725 PGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMGK 771 E R R +++ R + D + + K Sbjct: 178 -EEQKERAEKAWLRLKDSDIVRGHVSRITDEGIFVDLGDGIEGFVPK 223 >UniRef50_C0QZM2 30S ribosomal protein S1 n=2 Tax=Brachyspira RepID=C0QZM2_BRAHW Length = 554 Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 12/222 (5%) Query: 521 VAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERIL 580 V ++ +R+ LL+ ++ FL ++ ++ + E + I Sbjct: 158 VIKKNGRDVVVSRRVLLEETQN-----AGIETFLNNLKENDIINGKVKNIEKFGAFIEIT 212 Query: 581 AATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFAD 640 L + K + + ++K R K Sbjct: 213 PGFDGFLAIPNMSWD-----KVVNPKSVISKGEERMFKVLHIDKENRKVDLGLKQLDEDP 267 Query: 641 GVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK-FVEDPHTVVKAGD 699 + + G I+ G VTNV FGAFV + +GLVH+S LS V +P VK G Sbjct: 268 WGKFVEQYHIGDIINGEVTNVKKFGAFVKVADGIEGLVHVSDLSWNSHVNNPSDFVKKGA 327 Query: 700 IVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGNERPQ 740 ++ K+L+++ +++ L ++ E P +T + + Sbjct: 328 FLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFPVKSAVK 369 Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 10/161 (6%) Query: 607 DEKFGVPTVTDIIKE-----LEKPGRDPRPEFKTAQFAD----GVETMNDLQPGMILEGA 657 D G+ I KE ++K GRD + +N+L+ I+ G Sbjct: 139 DLARGIKEADYIGKEYEFRVIKKNGRDVVVSRRVLLEETQNAGIETFLNNLKENDIINGK 198 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 V N+ FGAF++I DG + I ++S V +P +V+ G+ KVL +D + +++ L Sbjct: 199 VKNIEKFGAFIEITPGFDGFLAIPNMSWDKVVNPKSVISKGEERMFKVLHIDKENRKVDL 258 Query: 718 TMR-LDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAG 757 ++ LDE P + + K G + A Sbjct: 259 GLKQLDEDPWGKFVEQYHIGDIINGEVTNVKKFGAFVKVAD 299 Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 26/201 (12%), Positives = 65/201 (32%), Gaps = 6/201 (2%) Query: 552 GFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFG 611 F+ H + ++ + + + ++ + L+ S N ++ +D Sbjct: 270 KFVEQYHIGDIINGEVTNVKKFGAFVKVADGI----EGLVHVSDLSWNSHVNNPSDFVKK 325 Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIG 671 + I ++ R K + D ++ V + A ++ Sbjct: 326 GAFLECKILDMNAAERKLTLGLKQVKENPWDTVEKDFPVKSAVKCKVKRIIKNFAVFELP 385 Query: 672 VHQDGLVHISSLSNK-FVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETN 729 +G+ IS + + + VK G+ V + ++ +D ++RI L+ + + P Sbjct: 386 NGLEGICDISDFDWRNNIVNMKDYVKEGEEVNMVIMSIDRDKQRIKLSYKHTKDSPWRLF 445 Query: 730 ARRGGGNERPQNNRPAAKPRG 750 + A G Sbjct: 446 EKAHPQGSIVDGTVKAIVDSG 466 Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%) Query: 592 GNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPG 651 S + D V +I +++ + + +K + + G Sbjct: 393 DISDFDWRNNIVNMKDYVKEGEEVNMVIMSIDRDKQRIKLSYKHTKDSPWRLFEKAHPQG 452 Query: 652 MILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 I++G V + + GA V + +G +H+S + VVK G+ V EV+ Sbjct: 453 SIVDGTVKAIVDSGAIVSLEDDLEGYMHVSQVEIPKGSTLEEVVKVGETYPFVVREVNQS 512 Query: 712 RKRIALTMRL 721 ++RI+L+ R Sbjct: 513 KRRISLSRRE 522 >UniRef50_A5CF24 30S ribosomal protein S1 n=2 Tax=Orientia tsutsugamushi RepID=A5CF24_ORITB Length = 507 Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 10/224 (4%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 Q + + +R+ +L+ +R G + L H L+ Y Sbjct: 190 QILKMDKKLGNIVVSRRAVLEEARAGIR-----QEVLSKIHVGMILNGVVKSIVYYGAFI 244 Query: 578 RILAATQQALKDLMGNSSELRNL---KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFK 634 + + + + N+ K + +E V ++ ++ K Sbjct: 245 ELTGSDELTFDVKVDGLLHSINILWRKINHPGEELQIGQQVRVVVIGIDISTGQISLGMK 304 Query: 635 TAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE-DPHT 693 + N LQ G I G V ++ +GAF+++ +GL H L + + +P Sbjct: 305 QLSANPWDDIENSLQIGDIKVGKVKSIAEYGAFIEVTKDLEGLCHSGHLGWEKINQNPKK 364 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGN 736 + G V K+L++D +R RI+L+++L P E A + Sbjct: 365 SLTIGQEVVFKILDIDKERHRISLSLKLCKPNPWEVLAEKYQVG 408 Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 9/140 (6%) Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI---- 670 + + K+L R + A+ E ++ + GMIL G V ++ +GAF+++ Sbjct: 191 ILKMDKKLGNIVVSRRAVLEEARAGIRQEVLSKIHVGMILNGVVKSIVYYGAFIELTGSD 250 Query: 671 ----GVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQP 725 V DGL+H ++ + + P ++ G V+V V+ +D+ +I+L M+ L P Sbjct: 251 ELTFDVKVDGLLHSINILWRKINHPGEELQIGQQVRVVVIGIDISTGQISLGMKQLSANP 310 Query: 726 GETNARRGGGNERPQNNRPA 745 + + + Sbjct: 311 WDDIENSLQIGDIKVGKVKS 330 Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 24/193 (12%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 I + D ++ + T+ + + G Sbjct: 313 DIENSLQIGDIKVGKVKSIAEYGAFIEVTKDLEGLCHSGHLGWEKINQNPKKSLTIGQEV 372 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFV------ 668 V I +++K K + Q G ++ + N+TNFG FV Sbjct: 373 VFKI-LDIDKERHRISLSLKLCKPNPWEVLAEKYQVGTVIRAPLRNITNFGMFVALSVTT 431 Query: 669 -----DIGVH----------QDGLVHISSLSNKFVEDPHTV--VKAGDIVKVKVLEVDLQ 711 +I DG++H S + + +++ GD ++ VL VD++ Sbjct: 432 NAVKYEIDGKEYEIGEMTYQIDGMIHESDILKHGDTNSNSLKNYTKGDEIECMVLAVDVE 491 Query: 712 RKRIALTMRLDEQ 724 ++RI L ++ Sbjct: 492 KERINLGIKQLAD 504 Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 38/98 (38%), Gaps = 9/98 (9%) Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTV--VKAGDIV 701 T ++ G +++G V + + VDI + +G + +S + V + GD+V Sbjct: 48 TNEQIKAGTVVKGKVVEIDDEVVIVDIKLKNEGRIPLSEF-----KLASDVPLPQIGDLV 102 Query: 702 KVKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNE 737 V V +++ + L+ L E+ Sbjct: 103 DVYVEKIEGRNGCTVLSREKALREEAWSVLDEAQKNGS 140 >UniRef50_B9QA08 Suppressor of ty, putative n=3 Tax=Toxoplasma gondii RepID=B9QA08_TOXGO Length = 3132 Score = 121 bits (304), Expect = 8e-26, Method: Composition-based stats. Identities = 84/470 (17%), Positives = 143/470 (30%), Gaps = 122/470 (25%) Query: 315 LHDLLMAAPAGLRA----TMGLDPGLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMT 370 +++ L+ AP + +P R A + G + +A + Sbjct: 2056 VYEFLLNAPLPSQQEVEGVQNEEPDTRELEAAAEMRPAG-------VSAEQRRAYQDLER 2108 Query: 371 VAALCEKHNVELVAIGNGTASRE------TERFYLDVQKQFPKVTAQKVIVSEAGASVYS 424 + H V+ +G ER ++K+ + + + S ++++ Sbjct: 2109 LVRFFRDHFVDAAVVGVRDRFALLLYLILKERVVPKLKKKEQPLFLE--LASLEVPTIWA 2166 Query: 425 ASELAAQEFPD-LDVSLRGAVSIARRLQDPLAELVKID-------PKSIGVGQYQHDVSQ 476 S+ A Q L +S+AR LQDPLAEL + + + Q V Sbjct: 2167 GSDKAPQVLRQKLAKEGLMCLSLARTLQDPLAELAGLWSEGRENSLLQLKLHPLQKLVPS 2226 Query: 477 TQLARKLDAVVEDCVNAVGVDLNTA------------SVPLLTRVAGLTRMMAQNIVAWR 524 +L L+ V+ V VGV+L A + LL V GL A ++ Sbjct: 2227 DRLQSALERVLLTSVGKVGVELKRALRGSTAALGGNPTAALLQFVPGLGPRKAARLLGMF 2286 Query: 525 DENGQFQNRQQLLKVS--------------------------------RLGPKAFEQCAG 552 + R QL + LG K + C Sbjct: 2287 KTSTLLM-RSQLCTPNDGSTSDSDGGRGDLDDFYPPHSQSEKRHAQPVGLGRKVYLNCVS 2345 Query: 553 FLRI------NHGDNPLDASTVHP-EAYPVVERILAATQQALKDLM-------------- 591 FLR+ + LD + +HP E V +I + Sbjct: 2346 FLRLKNKTSDPESVDALDDTRIHPLEGRSFVAKICRDAVAEKDEAHQTEEEEENGDTGGA 2405 Query: 592 -----------------GNSSELRNLKASDFT-------DEKFGVPTVTDIIKELEKPGR 627 + L ++ F+ D+ +P + I EL P R Sbjct: 2406 RRRDEDVDDEDAIVEVFRKPALLDDMDLEAFSQMLAETKDQARCLPYLEFITSELRHPYR 2465 Query: 628 DPRPEFKTAQFADGV-----ETMNDLQPGMILEGAVTNVTNFGAFVDIGV 672 DPR F++A + E ++ PG + V N V + Sbjct: 2466 DPRLPFESASEMEVFFWAIGEDADEFHPGSSVSCQVVFARNTSLVVRLQP 2515 Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 8/56 (14%), Positives = 19/56 (33%) Query: 271 ADSWRKGVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGL 326 ++ ++ +++L + E+ + RA+ I L L P Sbjct: 1828 WLHIQRRILERVVEVELLPIFKREVREDLLHRAQQVVILRCREMLEWRLNTQPLRP 1883 >UniRef50_Q9ZKF6 30S ribosomal protein S1 n=44 Tax=Epsilonproteobacteria RepID=RS1_HELPJ Length = 552 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 39/242 (16%), Positives = 88/242 (36%), Gaps = 14/242 (5%) Query: 512 LTRMMAQNIVAWRDENGQFQ-NRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + + I+ EN +R++ +V+ Q + P+ Sbjct: 156 IGKRIKACIIRVDKENHSINISRKRFFEVNDK-----RQLEISKELLEATEPVLGVVRQI 210 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 + + + + + + K DE V ++ R Sbjct: 211 TPFGIFVKFKGIDGLVHYSEISHKGPVNPEKYYKEGDE------VYVKAIAYDEEKRRLS 264 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VE 689 K E + L+PG ++ V+N+ ++G FVDIG +G +H+S +S V Sbjct: 265 LSIKATIEDPWEEIQDKLKPGYAIKVVVSNIEHYGVFVDIGNDIEGFLHVSEISWDKNVS 324 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKP 748 P + G + VK++++D + +R+ ++++ L +P + + + + Sbjct: 325 HPSHYLSVGQEIDVKIIDIDPKNRRLRVSLKQLTNRPFDVFESKHQVGDIVEGKVATLTD 384 Query: 749 RG 750 G Sbjct: 385 FG 386 Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats. Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 6/182 (3%) Query: 570 PEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDP 629 E Y V I ++ + S + S + + I +++ R Sbjct: 295 IEHYGVFVDI----GNDIEGFLHVSEISWDKNVSHPSHYLSVGQEIDVKIIDIDPKNRRL 350 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 R K + Q G I+EG V +T+FGAF+++G DGL+H + Sbjct: 351 RVSLKQLTNRPFDVFESKHQVGDIVEGKVATLTDFGAFLNLG-GVDGLLHNHDAFWDKDK 409 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKP 748 K GD++KVK+L+++ + K+I+L+ + L P E A++ + Q + K Sbjct: 410 KCKDHYKIGDVIKVKILKINKKDKKISLSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKD 469 Query: 749 RG 750 G Sbjct: 470 FG 471 Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 72/223 (32%), Gaps = 19/223 (8%) Query: 511 GLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + + I+ +N + + + + +L + F+ F + + ++ Sbjct: 331 SVGQEIDVKIIDIDPKNRRLR-----VSLKQLTNRPFDV---FESKHQVGDIVEGKVATL 382 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 + + L+ N + K G + I ++ K + Sbjct: 383 TDFGAFLNLGGVDG-----LLHNHDAFWDKDKKCKDHYKIGD-VIKVKILKINKKDKKIS 436 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED 690 K + E + +++G V ++ +FG F+ D L+ L+ Sbjct: 437 LSAKHLVTSPTEEFAQKHKTDSVIQGKVVSIKDFGVFIHAD-GIDVLIKNEDLNPLK--- 492 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 +K G + V+ ++ ++ ++ E+ E + Sbjct: 493 -KDEIKIGQEITCVVVAIEKSNNKVRASVHRLERKKEKEELQA 534 >UniRef50_A9AV75 RNA binding S1 domain protein n=5 Tax=Chloroflexi (class) RepID=A9AV75_HERA2 Length = 415 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 6/212 (2%) Query: 510 AGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVH 569 + + +++ Q + E + +NR L + + + L Sbjct: 184 SDMAKLVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGRVTS 243 Query: 570 PEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDP 629 + I A + S + + V+ I +++ + Sbjct: 244 LCDFGAFVDIGGADGLVHLSELSWS------RVKHPEEVLKVGDAVSVYILSVDEDKKRI 297 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 K Q + Q G + G VT +T FGAFV + +GL+HIS +S++ ++ Sbjct: 298 ALSIKRTQAEPWTTVTDRYQIGQSVSGVVTQLTAFGAFVRLEDGIEGLIHISEMSDERIQ 357 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 P V+ GD V +++ +D RKRI L+ R Sbjct: 358 HPRDVINEGDSVSARIIRIDPTRKRIGLSTRS 389 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 23/97 (23%), Positives = 44/97 (45%), Gaps = 2/97 (2%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 + G D R + + N L+ G ++G + V VDIG +G+V Sbjct: 27 DYSGDDDRALLEEYLRDPAHDYRN-LKYGDSVDGTIVRVDRDEVLVDIGSKSEGVVPGRE 85 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 +++ E+ +K GD++ V V++ + RI L++ Sbjct: 86 MTSLSSEERAE-LKVGDVLLVTVVQTEDAEGRIVLSI 121 >UniRef50_Q1RJH1 30S ribosomal protein S1 n=16 Tax=Alphaproteobacteria RepID=RS1_RICBR Length = 572 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 84/210 (40%), Gaps = 12/210 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + + +R+ +L+ SR + L L+ + + Y Sbjct: 171 KILSMDKKLGNIVVSRRAILEESRSEAR-----DEMLSKIKEGMILEGTVKNITDYGAFI 225 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + + +++ + + ++ V ++ + + + K Sbjct: 226 DLGSVDG------LLHLTDISWARVNHPSEVLEFNQKVKVMVIKFNEETKRISLGMKQLD 279 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + + + G + G VTN ++G F+++ +GLVH S +S K ++P + Sbjct: 280 YNPWEKIKEEFPVGKKMTGKVTNFADYGVFIELKDGLEGLVHSSEISWLKSNQNPRKTLT 339 Query: 697 AGDIVKVKVLEVDLQRKRIALTMRLDEQPG 726 G V+ VLEVD ++ R++L+++ +Q Sbjct: 340 IGQEVEFMVLEVDTEKHRVSLSIKQCQQNP 369 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 98/237 (41%), Gaps = 16/237 (6%) Query: 509 VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTV 568 + + ++ I +G+ +R++ +K G I +D + Sbjct: 78 LPEIGDLVDVYIEKTEGHSGKTLSREKAIKEELWGQ--------LELICSKGEFVDGTI- 128 Query: 569 HPEAYPVVER-ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR 627 + V+ + L G+ ++R +K + + K+L Sbjct: 129 ----FGRVKGGFTVDLSGVVAFLPGSQVDVRPIKDPSSIMNIRQPFKILSMDKKLGNIVV 184 Query: 628 DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 R + ++ E ++ ++ GMILEG V N+T++GAF+D+G DGL+H++ +S Sbjct: 185 SRRAILEESRSEARDEMLSKIKEGMILEGTVKNITDYGAFIDLGS-VDGLLHLTDISWAR 243 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNR 743 V P V++ VKV V++ + + KRI+L M+ + P E ++ Sbjct: 244 VNHPSEVLEFNQKVKVMVIKFNEETKRISLGMKQLDYNPWEKIKEEFPVGKKMTGKV 300 Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 78/207 (37%), Gaps = 10/207 (4%) Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y V + + L+ +S + V ++ E++ Sbjct: 305 DYGVFIELKDGL----EGLVHSSEISWLKSNQNPRKTLTIGQEVEFMVLEVDTEKHRVSL 360 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVED- 690 K Q ++ G +++ + N+T+FG FV + + DG++H ++ + + Sbjct: 361 SIKQCQQNPLIKFAETNPVGTVIKAPIRNITDFGIFVALSDNLDGMIHEGDITWEDNGNE 420 Query: 691 PHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPR 749 K GD V+ KVL +++++++I+L ++ L P + A + A K Sbjct: 421 LLKTYKKGDEVECKVLTINIEKEQISLGIKQLTPNPYQGIADEYKKGTVVKAVVTAIKDD 480 Query: 750 GREA----QPAGNSAMMDALAAAMGKK 772 G E + AG D +K Sbjct: 481 GLEVLVNDKAAGFIKKSDLSDEKEEQK 507 Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 22/193 (11%), Positives = 57/193 (29%), Gaps = 4/193 (2%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 F N + A + + + + ++ ++ Sbjct: 370 LIKFAETNPVGTVIKAPIRNITDFGIFVALSDNL----DGMIHEGDITWEDNGNELLKTY 425 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 V + + K ++ + G +++ VT + + G V Sbjct: 426 KKGDEVECKVLTINIEKEQISLGIKQLTPNPYQGIADEYKKGTVVKAVVTAIKDDGLEVL 485 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETN 729 + G + S LS++ E + ++ KV ++ +I L+++ + Sbjct: 486 VNDKAAGFIKKSDLSDEKEEQKPEMFAVDQEIEAKVASIEKSTNKILLSIKAYKIAERQK 545 Query: 730 ARRGGGNERPQNN 742 A + G+ N Sbjct: 546 ALKEYGSSDNTTN 558 >UniRef50_B0VI92 30S ribosomal subunit protein S1 (Modular protein) n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VI92_9BACT Length = 932 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 59/295 (20%), Positives = 111/295 (37%), Gaps = 27/295 (9%) Query: 471 QHDVSQTQLARKLDAVVEDCV------NAVGVD----LNTASVPLLTRVA---GLTRMMA 517 Q + + Q+ +LD V++ + G+D L S L + + + Sbjct: 275 QELLRKIQIDAELDGEVKNITQYGAFIDLGGIDGLLHLTDMSWGKLNHPSEMLQIGDKVK 334 Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 ++ + E + L + +L P +E + + V+ + + Sbjct: 335 VKVINFDPETNRIS-----LGMKQLVPHPWENIE---IKYPEGSRVTGKVVNLKPFGAFV 386 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + L+ S K +D T+ I+ +++K + K + Sbjct: 387 ELEPGV----EGLVHISEMSWTKKITDAHKFLKIGETINAIVLDIDKENKRISLGMKQME 442 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 + + G IL + ++T FGAFV+I DGL+HIS +S K + P V K Sbjct: 443 PNPWLTIEDRYPIGTILTRKIKSLTAFGAFVEIEEGIDGLIHISDISWTKRIYHPREVYK 502 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 V+ VL +D + R+AL ++ L P ET + N + P+G Sbjct: 503 KNQEVEAVVLSIDRAQHRVALGVKQLVPDPWETLDQSLPINTEVKGKIGKLIPKG 557 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 6/148 (4%) Query: 608 EKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGV----ETMNDLQPGMILEGAVTNVTN 663 ++F + + +++ + + + E + +Q L+G V N+T Sbjct: 237 DQFIGKELYFKVVNIDEEHHNIILSRRQVLEEEAEQKRQELLRKIQIDAELDGEVKNITQ 296 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LD 722 +GAF+D+G DGL+H++ +S + P +++ GD VKVKV+ D + RI+L M+ L Sbjct: 297 YGAFIDLG-GIDGLLHLTDMSWGKLNHPSEMLQIGDKVKVKVINFDPETNRISLGMKQLV 355 Query: 723 EQPGETNARRGGGNERPQNNRPAAKPRG 750 P E + R KP G Sbjct: 356 PHPWENIEIKYPEGSRVTGKVVNLKPFG 383 Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 37/260 (14%), Positives = 83/260 (31%), Gaps = 20/260 (7%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 + + ++ EN + L + ++ P + I L Sbjct: 416 IGETINAIVLDIDKENKRIS-----LGMKQMEPNPWLTIEDRYPI---GTILTRKIKSLT 467 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 A+ I L+ S + + V ++ +++ Sbjct: 468 AFGAFVEIEEGI----DGLIHISDISWTKRIYHPREVYKKNQEVEAVVLSIDRAQHRVAL 523 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH---QDGLVHISSLSNKFV 688 K L ++G + + G VDI V+ +G V +S L+ + Sbjct: 524 GVKQLVPDPWETLDQSLPINTEVKGKIGKLIPKGVLVDIPVNNDVVEGFVPVSHLAIPKL 583 Query: 689 EDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL-----DEQPGETNARRGGGNERPQNNR 743 E G+ + +KV+E+D++ +R+ L+++ D + E R + R Sbjct: 584 EHSEDAFYIGEEIPLKVIELDMENRRLILSVKAFFFSRDPKLQEEYIALHEQYMREKVAR 643 Query: 744 PAAKPRGREAQPAGNSAMMD 763 K + +E + + + Sbjct: 644 QQKKKQEKETREKKFAQKKE 663 Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 6/120 (5%) Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 ++E E EK + + E+ + + G I+EG V ++T+ Sbjct: 69 AVSEEAKPEEPAPSPEPEQEKKELTQEEKEHQEMLSMYEESFSSFKKGEIIEGTVVDITD 128 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 VDIG +G++ IS + + + ++V +KV + E++ ++ L+ + + Sbjct: 129 KDVRVDIGFKSEGIIPISEFAYTGIPELNSV------IKVYINEIENGEGKLLLSKKKAD 182 >UniRef50_A7G2Q4 Ribosomal protein S1 n=13 Tax=Clostridium RepID=A7G2Q4_CLOBH Length = 387 Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 88/240 (36%), Gaps = 6/240 (2%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS V L + + E + + + L + ++ L Sbjct: 139 ASQIDNKYVKDLNVFKGEMVKGRLIELDKQKRKIVLSSRVVKEEEEAKRKEELLNSLEKG 198 Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 ++ E + I + + + ++ V + Sbjct: 199 QKIEGVVRRLEKFGAFVDIGGMDGLVHNSQLSWG------RVNHPSEVVSIGDKVEVYVL 252 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 + +K + K + + G ++EG + + NFGAFV++ +GLVHI Sbjct: 253 DFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGTIVKLLNFGAFVEVENGIEGLVHI 312 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ 740 S ++++ + P + GD VKVKVLEV+ KR++L+++ + + + + ++ Sbjct: 313 SEITDEHIAKPSEKLNIGDKVKVKVLEVNSDEKRMSLSIKEATEKPKEDFSKYDDSKEED 372 Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 55/236 (23%), Positives = 83/236 (35%), Gaps = 41/236 (17%) Query: 512 LTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPE 571 L++ A+ I AW F+N + L + E Sbjct: 90 LSKKKAEIIEAWSKLEKAFKNEEIL------------------------------EIKVE 119 Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 I + + F E + EL+K R Sbjct: 120 EIIKGGAIGHIQGIRVFIPASQIDNKYVKDLNVFKGEMVKGRLI-----ELDKQKRKIVL 174 Query: 632 EFKTAQFADGVET----MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF 687 + + + + +N L+ G +EG V + FGAFVDIG DGLVH S LS Sbjct: 175 SSRVVKEEEEAKRKEELLNSLEKGQKIEGVVRRLEKFGAFVDIG-GMDGLVHNSQLSWGR 233 Query: 688 VEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNN 742 V P VV GD V+V VL+ D K+IAL+++ + + P T + + Sbjct: 234 VNHPSEVVSIGDKVEVYVLDFDKDTKKIALSLKDVKKDPWNTVKDKYAVGSVIEGT 289 Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 9/185 (4%) Query: 537 LKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSE 596 + E+ ++ H L + V I + D + E Sbjct: 1 MSEEITMKDMMEEINSSMKRIHKGELLKGKVISVSDKEAVLNIG-----YISDGILPKKE 55 Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF-ADGVETMNDLQPGMILE 655 + + + + D ++ + E+ + K A+ + + ILE Sbjct: 56 VVDNEEVNLKDIISKDDVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILE 115 Query: 656 GAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRI 715 V + GA I + S + NK+V+D + V G++VK +++E+D Q+++I Sbjct: 116 IKVEEIIKGGAIGHIQ-GIRVFIPASQIDNKYVKDLN--VFKGEMVKGRLIELDKQKRKI 172 Query: 716 ALTMR 720 L+ R Sbjct: 173 VLSSR 177 Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 47/114 (41%), Gaps = 2/114 (1%) Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAG 698 + +M + G +L+G V +V++ A ++IG DG++ + + + ++ Sbjct: 12 EEINSSMKRIHKGELLKGKVISVSDKEAVLNIGYISDGILPKKEVVDNEEVNLKDIISKD 71 Query: 699 DIVKVKVLEVDLQRKRIALTMRLDE--QPGETNARRGGGNERPQNNRPAAKPRG 750 D++ V VLEV+ + L+ + E + + E + G Sbjct: 72 DVISVCVLEVNDGEGNVLLSKKKAEIIEAWSKLEKAFKNEEILEIKVEEIIKGG 125 >UniRef50_C7LJY0 Putative ribosomal protein S1 n=1 Tax=Candidatus Sulcia muelleri SMDSEM RepID=C7LJY0_SULMS Length = 648 Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats. Identities = 42/237 (17%), Positives = 92/237 (38%), Gaps = 15/237 (6%) Query: 512 LTRMMAQNIVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + M IV ++ + + LL+ K Q L + Sbjct: 187 VGQTMEGKIVKINNKTKNVVVSHKILLEKDLEKKKLISQLEK-------GQILIGIVKNL 239 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 Y + D + + +++ + +++ + +I +++ + Sbjct: 240 THYGSFIDVGGGI-----DGLCHITDISWERIDHPSEKLEVGQIINFVILSIDQIKNRVQ 294 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNK-FVE 689 K Q + L+ G +L G V+ VT++GAFV++ +GLVH+S +S ++ Sbjct: 295 LGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVEGLVHVSEMSWHQQLK 354 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPA 745 VK G+ VK+ +L ++ ++++L+M+ L P E + R + Sbjct: 355 SAKNFVKIGEKVKILILNLEHSAQKMSLSMKRLSPDPWENIENKYPLGTRNIGTVKS 411 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 41/247 (16%), Positives = 94/247 (38%), Gaps = 14/247 (5%) Query: 516 MAQNIV--AWRDENGQFQNRQQLLKV--SRLGPK-----AFEQCAGFLRINHGDNPLDAS 566 A+ ++ EN +F +++V +L K ++ + N + Sbjct: 85 KAEGLIPFNEFRENKKFPKINDIIEVIVEKLDYKGKLIISYNKAKKLKSWERIQNSWKKN 144 Query: 567 TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPG 626 + + + S++ DF + + T+ I ++ Sbjct: 145 EIIIFFVTARTKGGLIVVLFGIECFLPGSQIEKKPVKDF--DYYVGQTMEGKIVKINNKT 202 Query: 627 RDPRPEFKTAQFA--DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLS 684 ++ K + + ++ L+ G IL G V N+T++G+F+D+G DGL HI+ +S Sbjct: 203 KNVVVSHKILLEKDLEKKKLISQLEKGQILIGIVKNLTHYGSFIDVGGGIDGLCHITDIS 262 Query: 685 NKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-QPGETNARRGGGNERPQNNR 743 + ++ P ++ G I+ +L +D + R+ L ++ + P ++ + Sbjct: 263 WERIDHPSEKLEVGQIINFVILSIDQIKNRVQLGLKQLQTNPWIHFEKKLKKGKVLIGTV 322 Query: 744 PAAKPRG 750 G Sbjct: 323 SVVTDYG 329 Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats. Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 10/210 (4%) Query: 527 NGQFQNRQQLLKVSRLGPKAFEQ--CAGFLRINHGDNPLDASTVHPEAYPVVERILAAT- 583 N + Q+ +LG K + F + L + Y + Sbjct: 280 NFVILSIDQIKNRVQLGLKQLQTNPWIHFEKKLKKGKVLIGTVSVVTDYGAFVELFPGVE 339 Query: 584 QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE 643 M +L++ K EK + + LE + K Sbjct: 340 GLVHVSEMSWHQQLKSAKNFVKIGEKVKILIL-----NLEHSAQKMSLSMKRLSPDPWEN 394 Query: 644 TMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVK 702 N G G V + TN G +++ +GL++ S +S + ++ + K GD+V+ Sbjct: 395 IENKYPLGTRNIGTVKSFTNCGVRLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQ 454 Query: 703 VKVLEVDLQRKRIALTMR-LDEQPGETNAR 731 + VL +D+ +++ + L + P E + Sbjct: 455 LIVLGLDVMTRKLNFGCKQLTKNPWENLEQ 484 Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 50/171 (29%), Gaps = 5/171 (2%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 + + ++ L+ NS K D V I+ L+ R K Sbjct: 417 VRLELEPGIEGLLYNSDISWTEKIKSGLDIYKKGDLVQLIVLGLDVMTRKLNFGCKQLTK 476 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDGLVHISSLSNKFVEDPHTVVKA 697 G I G + + G V + + ++ ++K Sbjct: 477 NPWENLEQIFPIGSIQIGKIIKFFSKGVIVKFNETTICAFAPLGFI----IKKSGILLKP 532 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKP 748 + + K+LE++ +R ++ P + ++++ + Sbjct: 533 YEEAEFKILELEKNYQRFFVSHSSIYVPKIKKEKSSPSKFEVEDSKFEVED 583 >UniRef50_Q0PQN6 30S ribosomal subunit protein S1 (Fragment) n=2 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=Q0PQN6_9GAMM Length = 283 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 6/132 (4%) Query: 612 VPTVTDIIKELEKPGRDPRPEFKTAQFADG----VETMNDLQPGMILEGAVTNVTNFGAF 667 + + +L++ + + + + + +LQ G L+G V N+T++GAF Sbjct: 73 GKDLEFKVIKLDRRRNNVVVSRRAVVEQEYSAEREKLLENLQEGQELKGVVKNLTDYGAF 132 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD-EQPG 726 VD+G DGL+HI+ ++ K V+ P VV+ GD + VKVL+ D +R R++L ++ + P Sbjct: 133 VDLG-GIDGLLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQMGDDPW 191 Query: 727 ETNARRGGGNER 738 ARR + R Sbjct: 192 VALARRYPESTR 203 Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 55/175 (31%), Gaps = 11/175 (6%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + I R N +R+ +++ + L L + Y Sbjct: 79 KVIKLDRRRNNVVVSRRAVVEQEYSAER-----EKLLENLQEGQELKGVVKNLTDYGAFV 133 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + +++ + +D +T + + ++ K Sbjct: 134 DLGGIDG------LLHITDMAWKRVKHPSDVVQIGDEITVKVLKFDRERNRVSLGLKQMG 187 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH 692 V L G VTN+ ++G FV+I +GLVH+S + E P Sbjct: 188 DDPWVALARRYPESTRLFGKVTNIADYGCFVEIEEGVEGLVHVSEMDLDQQEHPS 242 >UniRef50_B1LBI3 RNA binding S1 domain protein n=5 Tax=Thermotogaceae RepID=B1LBI3_THESQ Length = 543 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 43/235 (18%), Positives = 94/235 (40%), Gaps = 15/235 (6%) Query: 513 TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEA 572 + + I+ E +L + RL P +E+ + N + ++HP Sbjct: 233 GQNITAKIIELDKEKKNV-----ILSLKRLMPDPWEKVEEKYPVGKVVNG-EVISIHP-- 284 Query: 573 YPVVERILAAT-QQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 + R+ + + + ++L+ + V + ++K R Sbjct: 285 FGFFVRLEPGVEGLVPRSEVFWGNTRKSLEEVVSAGDLVKVEVI-----NVDKENRKLTL 339 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 +K A+ + ++ G VT + GAFV++ +G V +S +S K +++P Sbjct: 340 SYKKAKGDPWENIEDRYNVNNVVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEP 399 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPA 745 ++K G+ VKVK+L++D + ++I L+++ E P E + + Sbjct: 400 GEILKIGEKVKVKILKIDKENRKITLSIKRTQENPWERALKELETDSIVSGTIKK 454 Score = 99.4 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 3/142 (2%) Query: 612 VPTVTDIIKELEKPGR--DPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 + II E+ + R + Q E ++ + G I+EG V ++N G V+ Sbjct: 145 EKEIEVIILEMVQTKRGPRIVVSRRALQDKKIEEFFSEKKVGDIVEGTVKGISNAGVEVE 204 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGET 728 I G + S LS P +VK G + K++E+D ++K + L+++ L P E Sbjct: 205 ISEGVRGFIPRSELSYDTRISPEDIVKPGQNITAKIIELDKEKKNVILSLKRLMPDPWEK 264 Query: 729 NARRGGGNERPQNNRPAAKPRG 750 + + + P G Sbjct: 265 VEEKYPVGKVVNGEVISIHPFG 286 Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 20/246 (8%) Query: 509 VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTV 568 V GL R + + L+KV + + +P + Sbjct: 295 VEGLVPRSEVFWGNTRKSLEEVVSAGDLVKVEVINVDKENRKLTLSYKKAKGDPWENIED 354 Query: 569 HPEAYPVVERILAATQQALKDLMGNS--------SELRNLKASDFTDEKFGVPTVTDIIK 620 VV + + + SE+ + + + V I Sbjct: 355 RYNVNNVVTGKVTGIIKQGAFVELEEGVEGFVPVSEISWKRIDEPGEILKIGEKVKVKIL 414 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGV-HQDGLVH 679 +++K R K Q + +L+ I+ G + + N G V++ +G V Sbjct: 415 KIDKENRKITLSIKRTQENPWERALKELETDSIVSGTIKKIVNSGVVVEVEEYDLEGFVP 474 Query: 680 ISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR---KRIALTMRLDEQPGETNARRGGGN 736 + L ++ + G ++ + VL +D R+ L+ + E+ + Sbjct: 475 NNHLLSEP--------ETGKVLNLVVLRIDPDEVLGGRMILSEKRYEERKNIEEYKKMVE 526 Query: 737 ERPQNN 742 + Sbjct: 527 KESSQK 532 Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 5/106 (4%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + + G I++G V + G VD G +G V ++ L ++ K G+ + ++ Sbjct: 16 PEEFRRGQIVKGVVIGKEDDGVVVDFGGKSEGFVPVNEL----IKSL-DEYKVGENLTLQ 70 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +L ++ + + I R + R+ ++P R ++ +G Sbjct: 71 ILNLNYEERSILSERRPVLRKTLEELRKDYEEKKPVKARVVSQTKG 116 >UniRef50_A5V0B5 RNA binding S1 domain protein n=3 Tax=Chloroflexaceae RepID=A5V0B5_ROSS1 Length = 514 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 8/181 (4%) Query: 543 GPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKA 602 G K E L + ++ + + V I KD + + SEL + Sbjct: 224 GKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGVFVDIGVG-----KDGLVHVSELAEGRV 278 Query: 603 SDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVT 662 D T T + E++ G + AQ + L+ G ILEG ++ + Sbjct: 279 EKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQRGQK---LQQLEKGQILEGTISGLA 335 Query: 663 NFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 FGAFVDIGV +DGLVHIS LSN V VVK GD V+V+VL+VD Q KRI+L++RL+ Sbjct: 336 PFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKVGDRVQVRVLDVDPQSKRISLSLRLE 395 Query: 723 E 723 + Sbjct: 396 D 396 Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats. Identities = 52/129 (40%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Query: 645 MNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVK 704 + DL PGM LEG VT++ +G FVDIGV +DGLVHIS +S+ +E P +VK GD VKV+ Sbjct: 136 VKDLAPGMELEGRVTSIALYGIFVDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVR 195 Query: 705 VLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQP--AGNSAMM 762 V V+ +RI+LTMR E+ E + RG + AA G + G + Sbjct: 196 VKSVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFG 255 Query: 763 DALAAAMGK 771 + +GK Sbjct: 256 VFVDIGVGK 264 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 18/176 (10%) Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 L+ Y + I +D + + SE+ + + +D TV +K Sbjct: 143 MELEGRVTSIALYGIFVDIGVG-----RDGLVHISEMSDTRIESPSDLVKIGDTVKVRVK 197 Query: 621 ELEKPGRDPRPEFK-------------TAQFADGVETMNDLQPGMILEGAVTNVTNFGAF 667 +E GR + + E + L+ G +EG VT + FG F Sbjct: 198 SVEPDGRRISLTMRTKERSAEPRSGRGKKKPEVDYEKLAALRVGDNVEGTVTGMAPFGVF 257 Query: 668 VDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE 723 VDIGV +DGLVH+S L+ VE VV+ G KVLEVD RI+L++R + Sbjct: 258 VDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTFKVLEVDAAGARISLSLRRAQ 313 >UniRef50_Q8KTS5 Ribosomal protein S1 n=1 Tax=Candidatus Tremblaya princeps RepID=Q8KTS5_TREPR Length = 518 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 13/224 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 I R +R+ +++ + E L + + + Y Sbjct: 155 HVIKLDRKRGNVVLSRRSVIERRQ-----AENRNRLLASLGDGDVVQGVIKNITDYGAFI 209 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + + +++ + + +T + + ++ K Sbjct: 210 DLGGLDG------LLHITDISWRRIRHPSQVLSVGDRITVKVLKFDRTKTRVSLGLKQLH 263 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPH-TVVK 696 + G + G VTN+ ++G FV+I +GL+H+S + K + Sbjct: 264 PDPWAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFR 323 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERP 739 G V V VL+V R+RI+L M+ P T + N+R Sbjct: 324 VGQYVNVTVLDVSKTRRRISLGMKHGTLNPWLTFYKGFRKNDRM 367 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 6/144 (4%) Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP----GMILEGAVTN 660 E++ + + +L++ + ++ E N L G +++G + N Sbjct: 142 KDAERYEGRRLRFHVIKLDRKRGNVVLSRRSVIERRQAENRNRLLASLGDGDVVQGVIKN 201 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +T++GAF+D+G DGL+HI+ +S + + P V+ GD + VKVL+ D + R++L ++ Sbjct: 202 ITDYGAFIDLG-GLDGLLHITDISWRRIRHPSQVLSVGDRITVKVLKFDRTKTRVSLGLK 260 Query: 721 LD-EQPGETNARRGGGNERPQNNR 743 P R R + Sbjct: 261 QLHPDPWAGIIGRYPAGSRVRGRV 284 Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 56/168 (33%), Gaps = 7/168 (4%) Query: 550 CAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEK 609 AG + + + + Y + I + L + + F + Sbjct: 267 WAGIIGRYPAGSRVRGRVTNIADYGLFVEIERGIEGLLHVSEMHQKSKGTISLRHFRVGQ 326 Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVD 669 + TV D+ K R K + + + + + + G VD Sbjct: 327 YVNVTVLDV----SKTRRRISLGMKHGTLNPWLTFYKGFRKNDRMGAIIRSPVDVGILVD 382 Query: 670 IGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 + + G+V +S + +G +V+ +V+ VD+ R RI+L Sbjct: 383 LPMGVHGVV---CMSKDLRRRLLRALCSGGVVEARVVGVDVNRGRISL 427 >UniRef50_C9LUH9 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUH9_9FIRM Length = 373 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/237 (20%), Positives = 94/237 (39%), Gaps = 6/237 (2%) Query: 501 ASVPLLTRVAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGD 560 AS L V L+ + Q + A E + R L + S L + ++ Sbjct: 133 ASQMELHFVKDLSIYVGQTVEALPIEIDIRKQRLVLSRRSLLEEEREKKQEEVFSKLEVG 192 Query: 561 NPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIK 620 + + Y I + + S+L + +D V +K Sbjct: 193 QIIRGTVKRLVEYGAFIDIGGVDG------LAHISDLAWHRVKQPSDVLSVGDEVDVYVK 246 Query: 621 ELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHI 680 + + K ++ G ++G + +T+FGAF++I DGL+ + Sbjct: 247 NFDPETKRISLSVKDTMRDPWLDKAERYAEGTHIKGKIIKLTDFGAFMEIEPGFDGLIPM 306 Query: 681 SSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNE 737 L+++ + V+ GDIVKVK+L +D++RKRI+L++ ++ E + +E Sbjct: 307 GELADRRIARADEAVQLGDIVKVKILHIDMKRKRISLSITRAQRDAEVSDVSYYKDE 363 Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats. Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 6/146 (4%) Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVE----TMNDLQPGMILEGAVTNVTNFG 665 + TV + E++ + ++ + + + L+ G I+ G V + +G Sbjct: 147 YVGQTVEALPIEIDIRKQRLVLSRRSLLEEEREKKQEEVFSKLEVGQIIRGTVKRLVEYG 206 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDE-Q 724 AF+DIG DGL HIS L+ V+ P V+ GD V V V D + KRI+L+++ Sbjct: 207 AFIDIG-GVDGLAHISDLAWHRVKQPSDVLSVGDEVDVYVKNFDPETKRISLSVKDTMRD 265 Query: 725 PGETNARRGGGNERPQNNRPAAKPRG 750 P A R + G Sbjct: 266 PWLDKAERYAEGTHIKGKIIKLTDFG 291 Score = 50.1 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 7/179 (3%) Query: 544 PKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKAS 603 E ++ + + A+ V + I D+ + EL + + Sbjct: 2 KSLLEAEEESMQEVREHDVVKATVVAVDDGQAYVNIAG----LKADIPISKRELASPEPD 57 Query: 604 DFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTN 663 D + + L + + + E + G ++ +T V Sbjct: 58 SAKDVVKVDDEIEVFVVSLGGENGATVSKVRADRMVAWKEIEALKEDGQTVQAQITQVVK 117 Query: 664 FGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 G V G + S + FV+D G V+ +E+D++++R+ L+ R Sbjct: 118 GGL-VASVSGLRGFIPASQMELHFVKDLSIY--VGQTVEALPIEIDIRKQRLVLSRRSL 173 >UniRef50_Q2GE01 Ribosomal protein S1 n=2 Tax=Neorickettsia RepID=Q2GE01_NEOSM Length = 553 Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 9/224 (4%) Query: 514 RMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAY 573 ++ + + F +R+ LG + ++ + +D +Y Sbjct: 175 KLKFRILKMDPKTGKIFVSRR-----KALGAVHEAARSEYISTIKEGDIIDGRVKSIASY 229 Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEF 633 V +I + + + D + +++ + + + V + ++ Sbjct: 230 GVFVQIHESDKVGVVDGLLYVNDISWARVTHPSSIYSVGQEVRVKVIAVDPEKGRISLGV 289 Query: 634 KTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHT 693 K + PG + G VT+V ++G FV + +GLVH +S E P Sbjct: 290 KQLTENPWKDVSKKYTPGNVYPGVVTSVEDYGIFVRLEEGVEGLVHSGEISWTR-EKP-- 346 Query: 694 VVKAGDIVKVKVLEVDLQRKRIALTMRL-DEQPGETNARRGGGN 736 + V V +L VD + +IAL+++ + P + G Sbjct: 347 LFLPNSKVNVMLLSVDEEGHKIALSVKQCSDNPWKKFLDAYGLG 390 Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 34/261 (13%) Query: 493 AVGVD-----LNTASVPLLTRVAGL---TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGP 544 VGV +N S +T + + + + ++A E G+ L V +L Sbjct: 240 KVGVVDGLLYVNDISWARVTHPSSIYSVGQEVRVKVIAVDPEKGRIS-----LGVKQLTE 294 Query: 545 KAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASD 604 ++ + N E Y + R+ + + + + + L + Sbjct: 295 NPWKDVSK---KYTPGNVYPGVVTSVEDYGIFVRLEEGVEGLVHSGEISWTREKPLFLPN 351 Query: 605 FTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNF 664 V ++ +++ G K + ++ G++++ V +T+ Sbjct: 352 --------SKVNVMLLSVDEEGHKIALSVKQCSDNPWKKFLDAYGLGVVVKCKVVEITDS 403 Query: 665 GAFVD-IGVH---QDGLVHISSLSNKFVEDPHTVVK---AGDIVKVKVLEVDLQRKRIAL 717 G + + G V ++++S +P +K GD V+ K++ V+ R R+ Sbjct: 404 GIVLTLLDPGYSYVRGYVRLANISWSQ--NPRKELKRFTIGDEVEAKLVHVNPDRGRVMF 461 Query: 718 TMRLDE-QPGETNARRGGGNE 737 ++ E P E R + Sbjct: 462 NIKYVEYDPFEEFISRVNEKD 482 Score = 50.5 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 16/183 (8%) Query: 551 AGFLRINHGDNPLDASTVHPEAY--------PVVERILAATQQALKDLMGNSSELRNLKA 602 F N D +T+ E + +VE ++ + + + Sbjct: 16 RRFYSEVPDYNEEDFTTILEERFSDSLIREGDMVEGVIKSISPHFVLVNLGLKSEGKIPV 75 Query: 603 SDFTDE---KFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI--LEGA 657 F D + G + + K G K + G + G Sbjct: 76 QQFHDLGTLEVGSKIIVYVEKTETGSGNLVLSYTKALKQKVWNRLYEMYLNGSDEDVMGV 135 Query: 658 VTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIAL 717 + G V++ + + S L + V DP T+V +K ++L++D + +I + Sbjct: 136 ILYTIKSGCIVEVE-GLNAFLPNSHLDVRPVSDPATLVGV--KLKFRILKMDPKTGKIFV 192 Query: 718 TMR 720 + R Sbjct: 193 SRR 195 >UniRef50_C6XS49 RNA binding S1 domain protein n=62 Tax=Bacteroidetes RepID=C6XS49_PEDHD Length = 644 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 61/293 (20%), Positives = 105/293 (35%), Gaps = 29/293 (9%) Query: 474 VSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTRVA--------------GLTRMMAQN 519 VS+ + + L+ V++ + GV ++ V L + L + Sbjct: 250 VSKLEKGQVLEGTVKNITDF-GVFIDLGGVDGLLHITDISWGRIEHPKEVLSLDEKINVV 308 Query: 520 IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI 579 ++ + DE + L + +L P +E L I + V Y I Sbjct: 309 VLDFDDEKKRIA-----LGLKQLTPHPWESLNADLAIGSK---VKGKIVTVADYGAFLEI 360 Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 + + L+ S + + + + L++ R K Sbjct: 361 IPGV----EGLIHVSEMSWSQNLRSPQEFLKVGDEIEAEVLTLDREDRKMSLGIKQLTQD 416 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAG 698 G V N+TNFG FV+I DGL+HIS LS K V P+ K G Sbjct: 417 PWQNVAERYPIGSKHTAVVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVG 476 Query: 699 DIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 D + V VLE+D+ ++++L + L+E P +T + Q +G Sbjct: 477 DTLAVVVLELDVDNRKLSLGHKQLEENPWDTFETIFTLDSIHQGTVVKVTDKG 529 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%) Query: 610 FGVPTVTDIIKELEKPGRDPRPEFKTAQFAD----GVETMNDLQPGMILEGAVTNVTNFG 665 + T+ + ++ ++ K D VE ++ L+ G +LEG V N+T+FG Sbjct: 211 YVGKTMEFKVVKINHEFKNVVVSHKILIEDDLESQKVEIVSKLEKGQVLEGTVKNITDFG 270 Query: 666 AFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQ 724 F+D+G DGL+HI+ +S +E P V+ + + V VL+ D ++KRIAL ++ L Sbjct: 271 VFIDLG-GVDGLLHITDISWGRIEHPKEVLSLDEKINVVVLDFDDEKKRIALGLKQLTPH 329 Query: 725 PGETNARRGGGNERPQNN 742 P E+ + + Sbjct: 330 PWESLNADLAIGSKVKGK 347 Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/238 (15%), Positives = 75/238 (31%), Gaps = 19/238 (7%) Query: 533 RQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMG 592 R+ L + +L ++ A I + + + V I L+ Sbjct: 404 RKMSLGIKQLTQDPWQNVAERYPIGSKHTAV---VKNMTNFGVFVEIEEGI----DGLIH 456 Query: 593 NSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGM 652 S + K + + T+ ++ EL+ R K + Sbjct: 457 ISDLSWSKKVNHPNEFTKVGDTLAVVVLELDVDNRKLSLGHKQLEENPWDTFETIFTLDS 516 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 I +G V VT+ GA + + +G V ++ + +V+KA + K++E + Sbjct: 517 IHQGTVVKVTDKGAVIALPYGVEGFVPTKHMAKED----GSVIKAEETNDFKIIEFNKDA 572 Query: 713 KRIALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRGREAQPAGNSAMMDALAAAMG 770 KRI ++ E R A K + + A + +G Sbjct: 573 KRIVVS--------HARIWEEAKAEAVAEERNAKKKEAKASSSAVKKVKDSVEKSTLG 622 Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 8/129 (6%) Query: 624 KPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL 683 K + + +T N + G I+ G V ++ N +++G DGLV S Sbjct: 61 KAFGNYSDADRKKFEDMYTDTFNQITQGEIISGTVVSINNKDVVLNVGFKSDGLVSTSEF 120 Query: 684 SNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNERPQN 741 + +K GD V V V + ++ L+ + ++ E+ + Sbjct: 121 RDTP------DLKVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIING 174 Query: 742 NRPAAKPRG 750 + G Sbjct: 175 FVKSRTKGG 183 Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 3/116 (2%) Query: 607 DEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGA 666 D K G + + G+ + L I+ G V + T G Sbjct: 125 DLKVGDKVDVFVEAPEDANGQLILSRKRAKTQRSWESINEALDNDRIINGFVKSRTKGGL 184 Query: 667 FVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLD 722 VDI + + S + K + D V G ++ KV++++ + K + ++ ++ Sbjct: 185 IVDIM-GVEAFLPGSQIDIKPIRDYD--VYVGKTMEFKVVKINHEFKNVVVSHKIL 237 >UniRef50_D0LJ72 Ribosomal protein S1 n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LJ72_HALO1 Length = 608 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 11/207 (5%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 NR L + +L P +EQ + + + + I L Sbjct: 350 NNRISLG-MKQLEPNPYEQLNE---KYPPGTVVKGKVRNIADFGIFVEIEEGI----DGL 401 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK---PGRDPRPEFKTAQFADGVETMND 647 + S + ++ V ++ ++ K D Sbjct: 402 VHVSDMSWTQRVKHPSEMFQKGDEVEAVLLNIDTADGEKPKISLGIKQLNTDPWDRIPFD 461 Query: 648 LQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLE 707 PG I++ V V +FGAFV+I +GLVH+S +S++ V+DP V+ G +KV++L Sbjct: 462 FPPGKIVDAKVLKVLDFGAFVEIEKGIEGLVHVSEISDEHVDDPRKVLTPGQELKVQILS 521 Query: 708 VDLQRKRIALTMRLDEQPGETNARRGG 734 VD Q ++I L+++ + E +G Sbjct: 522 VDPQERKIGLSVKSANRATEMAEAQGY 548 Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 9/194 (4%) Query: 562 PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKE 621 + V + Y + + L+ S + + V ++ + Sbjct: 290 VVRGKVVSLKDYGAFIELEEGI----EGLVHISEMSWTRRVKHPSKMVAVGDVVDAVVLD 345 Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++ K + + PG +++G V N+ +FG FV+I DGLVH+S Sbjct: 346 VDVKNNRISLGMKQLEPNPYEQLNEKYPPGTVVKGKVRNIADFGIFVEIEEGIDGLVHVS 405 Query: 682 SLSN-KFVEDPHTVVKAGDIVKVKVLEVDLQRK---RIALTMRLDE-QPGETNARRGGGN 736 +S + V+ P + + GD V+ +L +D +I+L ++ P + Sbjct: 406 DMSWTQRVKHPSEMFQKGDEVEAVLLNIDTADGEKPKISLGIKQLNTDPWDRIPFDFPPG 465 Query: 737 ERPQNNRPAAKPRG 750 + G Sbjct: 466 KIVDAKVLKVLDFG 479 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 43/237 (18%), Positives = 82/237 (34%), Gaps = 13/237 (5%) Query: 516 MAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPV 575 + I + +R+ LL+ R K L ++ + Y Sbjct: 164 KFKVIKFNKKRGNIVLSRRVLLEKERAALK-----ESTLERLKEGQEVEGIVKNLTEYGA 218 Query: 576 VERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKT 635 + M + + ++ V + + K Sbjct: 219 FIDLGGIDGLLHITDMSWG------RVNHPSELFQVGDHVRVKVLKFNADTERVSLGLKQ 272 Query: 636 AQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTV 694 + PG ++ G V ++ ++GAF+++ +GLVHIS +S + V+ P + Sbjct: 273 ISEDPWSKAQEKYIPGTVVRGKVVSLKDYGAFIELEEGIEGLVHISEMSWTRRVKHPSKM 332 Query: 695 VKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 V GD+V VL+VD++ RI+L M+ L+ P E + + G Sbjct: 333 VAVGDVVDAVVLDVDVKNNRISLGMKQLEPNPYEQLNEKYPPGTVVKGKVRNIADFG 389 Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 11/193 (5%) Query: 555 RINHGDNPLDASTVHP-EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVP 613 + L + + + Y +V+ + Q D + + D D Sbjct: 26 EEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAIDEFRQADGGILVTPGDVIDVLLESR 85 Query: 614 TVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH 673 + L K D F E + ++EG +T G V I Sbjct: 86 ENEAGMCVLSKEKADR--------FKVWDEISAACERDELIEGTITQRVKGGLSVTIRGG 137 Query: 674 QDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRG 733 + S + + V + G K KV++ + +R I L+ R+ + + Sbjct: 138 VKAFLPGSQVDLRPVRNLDAF--IGQSYKFKVIKFNKKRGNIVLSRRVLLEKERAALKES 195 Query: 734 GGNERPQNNRPAA 746 + Sbjct: 196 TLERLKEGQEVEG 208 Score = 42.4 bits (98), Expect = 0.074, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 7/132 (5%) Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 +E G+ E A + +++ G IL+G V +V A VDIG +G + I Sbjct: 2 VEAGGQKYEAEESFAALFEESLNQEEVKEGDILQGTVISVGKDYAIVDIGYKSEGQIAID 61 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQP---GETNARRGGGNER 738 D +V GD++ V + + + L+ + + + +E Sbjct: 62 EF---RQADGGILVTPGDVIDVLLESRENEAGMCVLS-KEKADRFKVWDEISAACERDEL 117 Query: 739 PQNNRPAAKPRG 750 + G Sbjct: 118 IEGTITQRVKGG 129 >UniRef50_UPI00016B22D3 RNA binding S1 domain protein n=2 Tax=candidate division TM7 RepID=UPI00016B22D3 Length = 358 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 6/184 (3%) Query: 572 AYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRP 631 Y V L +Q + + S ++ + T+ I + ++ Sbjct: 124 EYEGVRGFLPVSQLSAEHYPRVGSSDKDEILQRLNNLI--GKTMKVRILDADRKSNKLIF 181 Query: 632 EFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 K A E L G +EG VT V +FG FV++ +GLVHIS +S + V +P Sbjct: 182 SEKEAVKDGLAERFEKLAVGDQVEGVVTGVVDFGVFVNVE-GIEGLVHISEISWERVNNP 240 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 VK G +K K++ +D R++L+M+ L + P T + ++ + P G Sbjct: 241 SDYVKTGQTIKAKIIAIDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFG 298 Query: 751 REAQ 754 Q Sbjct: 299 AFVQ 302 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 82/218 (37%), Gaps = 19/218 (8%) Query: 504 PLLTRVAGL--TRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDN 561 +L R+ L M + + A R N + ++ + A + Sbjct: 152 EILQRLNNLIGKTMKVRILDADRKSNKLIFSEKE---------AVKDGLAERFEKLAVGD 202 Query: 562 PLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKE 621 ++ + V + + + SE+ + ++ +D T+ I Sbjct: 203 QVEGVVTGVVDFGVFVNVEGIEG------LVHISEISWERVNNPSDYVKTGQTIKAKIIA 256 Query: 622 LEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHIS 681 ++K K + + + G +EG VT +T FGAFV + + LVHIS Sbjct: 257 IDKD--RLSLSMKQLTQDPWLTEVQNFSKGDKVEGTVTRITPFGAFVQVSPAIEALVHIS 314 Query: 682 SLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 L + DP V + + +L++D + ++I+L++ Sbjct: 315 ELGDSNNVDPEKVFTLNERKEFVILDIDKENRKISLSL 352 Score = 44.7 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%) Query: 643 ETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVK 702 + L G ++ G V ++ +D+G G V + + GD V Sbjct: 17 TSAKQLVAGEVVTGKVLSLKKHEVLIDLGAQGVGFVPRREVGFSRN------ISEGDEVS 70 Query: 703 VKVLEVDLQRKRIALTMR--LDEQPGETNARRGGGNE 737 V++ +L+ L++R + ++ E + R E Sbjct: 71 ASVVDTELENGMSLLSLRKAVKDRGWEEVSARLESGE 107 >UniRef50_C4XQS6 30S ribosomal protein S1 n=3 Tax=Desulfovibrio RepID=C4XQS6_DESMR Length = 576 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 57/295 (19%), Positives = 101/295 (34%), Gaps = 23/295 (7%) Query: 472 HDVSQTQLARKLD--AVVEDCV---NAVGVDLNTASVPLLTRVAGLTRMMAQNIVAWRDE 526 D + L + L+ V V GV ++ + L + ++ ++ Sbjct: 194 RDSMRKDLLKTLEEGQTVTGRVKNITEYGVFVDLGGLDGLMHITDMSWKRIKHPKELVHL 253 Query: 527 NG----QFQNRQQLLKVSRLGPK-----AFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + Q + LG K +E AG + + + Y Sbjct: 254 GDELELKVLSFDQDKQKVSLGMKQLIADPWENIAGKYPEDTRMS---GKVTNLVDYGAFV 310 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + ++ L+ S K + V ++ ++ + K + Sbjct: 311 EL----EPGVEGLVHISEMSWTRKLRHPSQMVHVGDEVEVVVLSVDPDKKRISLGMKQVR 366 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVK 696 G ILEG+V N+T FG F+ I DGL+H+S +S K V P + K Sbjct: 367 PNPWDIVAEKYPEGTILEGSVKNITEFGIFIGIEDGIDGLIHVSDISWTKKVRHPGEMFK 426 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQNNRPAAKPRG 750 +GDIV KVL VD + ++ L ++ L E P + G Sbjct: 427 SGDIVMAKVLTVDKENEKFTLGIKQLSEDPWTRVPDTYPVGAMVKGTVTNITDFG 481 Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 4/167 (2%) Query: 555 RINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPT 614 L+ S + + + I + + L+ S K + Sbjct: 375 EKYPEGTILEGSVKNITEFGIFIGI----EDGIDGLIHVSDISWTKKVRHPGEMFKSGDI 430 Query: 615 VTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQ 674 V + ++K K + G +++G VTN+T+FG FV++ Sbjct: 431 VMAKVLTVDKENEKFTLGIKQLSEDPWTRVPDTYPVGAMVKGTVTNITDFGLFVEVEEGI 490 Query: 675 DGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRL 721 +GLVH+S +S K V+ P + K GD ++ KV+ V +R+ L+++ Sbjct: 491 EGLVHVSEISRKKVKTPAEIYKEGDEIEAKVIHVSADERRLGLSIKS 537 Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats. Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 3/144 (2%) Query: 601 KASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTN 660 ++F + I + R + + + + + L+ G + G V N Sbjct: 159 DMDALVGQEFEFRVLK-INRRRSNVIVSRRVLLEERRDSMRKDLLKTLEEGQTVTGRVKN 217 Query: 661 VTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMR 720 +T +G FVD+G DGL+HI+ +S K ++ P +V GD +++KVL D +++++L M+ Sbjct: 218 ITEYGVFVDLG-GLDGLMHITDMSWKRIKHPKELVHLGDELELKVLSFDQDKQKVSLGMK 276 Query: 721 LD-EQPGETNARRGGGNERPQNNR 743 P E A + + R Sbjct: 277 QLIADPWENIAGKYPEDTRMSGKV 300 Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 3/97 (3%) Query: 623 EKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS 682 D F+ A E DL+ G I G V + VD+ +G + +S Sbjct: 9 NNSNMDMEVNFEDALENYLNEDFGDLEEGSITPGVVVRIGKEHVLVDVNFKSEGQIPVSE 68 Query: 683 LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTM 719 + E VK GD + V V+ + I ++ Sbjct: 69 FMDALGE---LEVKVGDQIDVYVVSKNESEGTIIMSR 102 Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 56/161 (34%), Gaps = 5/161 (3%) Query: 574 PVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGR-DPRPE 632 VV RI + + + + V D+ + Sbjct: 42 GVVVRIGKEHVLVDVNFKSEGQIPVSEFMDALGELEVKVGDQIDVYVVSKNESEGTIIMS 101 Query: 633 FKTAQFADGVETMNDLQP-GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDP 691 + A+ + + ++Q ++ G + G VD+G + + S + + V D Sbjct: 102 RERAKRMQLFDKLEEIQEKDDVISGKIVRRIKGGYTVDLG-GVEAFLPGSHVDLRPVPDM 160 Query: 692 HTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARR 732 + G + +VL+++ +R + ++ R+ + + R+ Sbjct: 161 DAL--VGQEFEFRVLKINRRRSNVIVSRRVLLEERRDSMRK 199 >UniRef50_B9L032 30S ribosomal protein S1 n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L032_THERP Length = 443 Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 89/235 (37%), Gaps = 6/235 (2%) Query: 510 AGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVH 569 A + RM+ Q + E + +NR L + + + A + Sbjct: 175 ADMARMVGQRLKLKIIEINRHRNRLILSERQAVQEQRDAMKAQLIETLREGETRRGRVTS 234 Query: 570 PEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDP 629 + V I A + + + ++ V ++ + R Sbjct: 235 IADFGVFVDIGGADGLVHLSEISWT------RVKHPSEVLRVGDEVDVMVLSVNPEQRKI 288 Query: 630 RPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVE 689 + Q ++ + Q G ++ G +T + +FGAF + +GL+H+S L+ VE Sbjct: 289 ALSIRRTQPEPWMQVASQFQVGQVVRGTITQLASFGAFARLQEGVEGLIHVSELAGWRVE 348 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRP 744 P+ V++ GD V V+V+ +D R+RI L++R + + G E + Sbjct: 349 HPNEVLQEGDDVIVRVIRIDPARRRIGLSLRRALEISDEELEATLGPEAVAIKQQ 403 >UniRef50_A1AM10 SSU ribosomal protein S1P n=10 Tax=Desulfuromonadales RepID=A1AM10_PELPD Length = 407 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 69/206 (33%), Gaps = 13/206 (6%) Query: 512 LTRMMAQNIVAWRDE-NGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHP 570 + + I + ++ +R+ LL+ + LD + Sbjct: 164 VGSRLTFRITEYGEKGRNIVVSRRVLLEEEQQ-----RMREEAWASISEGMTLDGTVSSL 218 Query: 571 EAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPR 630 + I +G S + D + V ++K L++ Sbjct: 219 RDFGAFVDIGGLEGLVPLSEIGWS------RVKDAAELLSVGQKVQVVVKSLDQERNRIS 272 Query: 631 PEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSL-SNKFVE 689 K + G G V +T FGAFV + DGL+HIS L K + Sbjct: 273 LSIKETLVDPWDQVAEQHPEGSFQSGTVARLTPFGAFVTLPCGLDGLIHISKLGGGKRIS 332 Query: 690 DPHTVVKAGDIVKVKVLEVDLQRKRI 715 P V+ G V+VKV +D + +RI Sbjct: 333 HPREVLSEGQAVEVKVEGIDRESRRI 358 >UniRef50_D0J9D1 30S ribosomal protein S1 n=25 Tax=Bacteria RepID=D0J9D1_BLASP Length = 606 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 34/226 (15%), Positives = 81/226 (35%), Gaps = 13/226 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 + + + + + L++ EQ + L+ + Y Sbjct: 195 KVVKINQKTKNVVVSHKILIERDIE-----EQRKEMISKLDKGQVLEGKIKNILPYGAFV 249 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + M + T+ + ++ ++K + K Q Sbjct: 250 DLGGVDALLHITDMSWP------HINHPTEVVQLEQELKFVVLGVDKDKNRVQLGLKQLQ 303 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKF-VEDPHTVVK 696 N+L+ G ++G V+ + ++GAFV+I + L+HIS +S + + V+ Sbjct: 304 PHPWNSLDNNLKVGNKVKGKVSVLADYGAFVEIIPGVEALLHISEMSWSYDLSSTQDFVQ 363 Query: 697 AGDIVKVKVLEVDLQRKRIALTMR-LDEQPGETNARRGGGNERPQN 741 GD ++ +L +D Q ++++L+++ L P + + Sbjct: 364 IGDEIEAVILTIDRQERKMSLSVKQLTPDPWIDIQNKYPIGSKHVG 409 Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 10/213 (4%) Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 +NR QL + +L P + N + Y I+ + L Sbjct: 292 KNRVQLG-LKQLQPHPWNSLD---NNLKVGNKVKGKVSVLADYGAFVEIIPGV----EAL 343 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + S + S D + +I +++ R K ++ N Sbjct: 344 LHISEMSWSYDLSSTQDFVQIGDEIEAVILTIDRQERKMSLSVKQLTPDPWIDIQNKYPI 403 Query: 651 GMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSN-KFVEDPHTVVKAGDIVKVKVLEVD 709 G G V TNFG +++ G+++ + LS K ++ P D ++V +L +D Sbjct: 404 GSKHVGIVRKFTNFGISLELEKGISGIIYANDLSWGKKIKHPSEFCNINDKLEVIILALD 463 Query: 710 LQRKRIALTMRL-DEQPGETNARRGGGNERPQN 741 Q +R+ L + E P E + Sbjct: 464 PQTRRLNLGHKQITENPWEKYEKIYYVGSIHNG 496 Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 579 ILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQF 638 I ++ + ++ + K ++ + II L+ R K Sbjct: 419 ISLELEKGISGIIYANDLSWGKKIKHPSEFCNINDKLEVIILALDPQTRRLNLGHKQITE 478 Query: 639 ADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVH-QDGLVHISSLSNKFVEDPHT--VV 695 + G I G + N+ + GA V + + I + S + + Sbjct: 479 NPWEKYEKIYYVGSIHNGFIVNLFDKGASVKLLNDQIEDFQEIEAFSPLRFLEKKDGSTL 538 Query: 696 KAGDIVKVKVLEVDLQRKRIALT----MRLDEQPGETNARRGGGNER 738 K + KV+E + + K+I ++ R +Q E R ER Sbjct: 539 KKEEKSNFKVIEFNKETKKIVVSHTSIYREKDQKKEKTRVRNRKFER 585 Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 29/216 (13%), Positives = 72/216 (33%), Gaps = 15/216 (6%) Query: 536 LLKVSRLGPKAFEQC-AGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGNS 594 L + K FE+ A L + H + ++ + + S Sbjct: 40 LNSEQQEERKKFEKIYAETLPKIQELEIYQGTITHITE----KNLIVDIGFKAEGAIPIS 95 Query: 595 SELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMIL 654 N + ++ +++ G+ K + + G ++ Sbjct: 96 EFRENFNFK-------VGEKMEVMVVKMDYKGQCILSYQKAKIMRNWERINEAHEKGEVI 148 Query: 655 EGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKR 714 G V T G ++I + + S ++ K V D T G ++VKV++++ + K Sbjct: 149 LGYVAARTKGGLIIEI-FDIECFLPGSHINVKPVRDYDTY--VGKTMEVKVVKINQKTKN 205 Query: 715 IALTMRLDEQPGETNARRGGGNERPQNNRPAAKPRG 750 + ++ ++ + R+ ++ + K + Sbjct: 206 VVVSHKILIERDIEEQRKEMISKLDKGQVLEGKIKN 241 >UniRef50_UPI00016C0B56 30S ribosomal protein S1 n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0B56 Length = 373 Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 74/217 (34%), Gaps = 11/217 (5%) Query: 518 QNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVE 577 Q I + + + L K RL E+ L Y Sbjct: 166 QIIEFVPQKRKLIVSGKALAKQRRL-----EKRQARLDQLQEGEKYIGKITKLMNYGAFV 220 Query: 578 RILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQ 637 + + S E V I +++ K Sbjct: 221 DLDGIEGLIHNSDLSWSRIKHPKDIVQEGQE------VEVSIISIDRENGKIALALKDIN 274 Query: 638 FADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKA 697 T+ +L+ G +++G VT FGAFV I +GL+HIS +S P V+ + Sbjct: 275 NDPWENTVANLEEGQLVKGIVTRFALFGAFVRIADGVEGLIHISQISTPRPTKPQDVLTS 334 Query: 698 GDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGG 734 G V+VK++++D KRI+L++ + ++ Sbjct: 335 GQEVEVKIIKIDKAEKRISLSLIAALDEIDPETKKMY 371 Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 26/214 (12%), Positives = 72/214 (33%), Gaps = 9/214 (4%) Query: 534 QQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDLMGN 593 +++++ + + H + A+ E I A+ + Sbjct: 5 EEVIEDDLTMADFMSEVDKTMAKIHRGDIRKATVQVVEE----NGIXASIGYHTDAYLPW 60 Query: 594 SSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMI 653 + D ++ K G I++ + G + K + + I Sbjct: 61 REYSN--REFDKSEVKIGDEFNVSILRLDDGDGNVLISKKKVENEKSYDDIEKMFKNKEI 118 Query: 654 LEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQRK 713 + + +V G I + S +++ +VED H+ G + V+++E Q++ Sbjct: 119 VTVKLKDVIKGGLTTSI-KGVRAFIPGSQITDTYVEDLHSY--VGKSIDVQIIEFVPQKR 175 Query: 714 RIALTMRLDEQPGETNARRGGGNERPQNNRPAAK 747 ++ ++ + + R+ ++ + + K Sbjct: 176 KLIVSGKALAKQRRLEKRQARLDQLQEGEKYIGK 209 >UniRef50_Q4EP69 Ribosomal protein S1, putative (Fragment) n=1 Tax=Listeria monocytogenes str. 1/2a F6854 RepID=Q4EP69_LISMO Length = 355 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 8/159 (5%) Query: 597 LRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADG----VETMNDLQPGM 652 + + DF D + T+T + E E + + +++++ G Sbjct: 194 VEDHFVEDFAD--YKGTTLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGD 251 Query: 653 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQR 712 ++EG V + NFGAFVDIG DGLVHIS +S K + P V++ G V VKV+ +D + Sbjct: 252 VIEGTVQRLANFGAFVDIG-GVDGLVHISQISYKHIATPQEVLEEGQKVTVKVIGIDPEN 310 Query: 713 KRIALTMRL-DEQPGETNARRGGGNERPQNNRPAAKPRG 750 +RI+L+++ P + + + G Sbjct: 311 ERISLSIKATLPGPWDGITEKAQVGSVLEGKVVRLVTFG 349 Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 78/228 (34%), Gaps = 22/228 (9%) Query: 520 IVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERI 579 I R NG + L V +R + + + E +++ Sbjct: 51 IPKIRLTNGGLHMSEDLFDVE-------------VRNFEEGDKVTGTVTSVED----KQV 93 Query: 580 LAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFA 639 + D + SEL N+ +D T+ I+ ++E + K Sbjct: 94 YVGIPGSKLDGVVPISELSNIHVETASDVVSVGDTLDLIVTKVEDDI-LVLSKRKVDAEK 152 Query: 640 DGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISSLSNKFVEDPHTVVKAGD 699 + + G + E V++V G VD+ V S + + FVED G Sbjct: 153 ASDDIKAKFESGEVFEAVVSDVVKGGLVVDL--GVRAFVPASLVEDHFVEDFADY--KGT 208 Query: 700 IVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQNNRPAAK 747 + KV+E + + R+ L+ R + + + ++ +E + + Sbjct: 209 TLTFKVVEFEPENNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGT 256 Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 59/200 (29%), Gaps = 14/200 (7%) Query: 478 QLARKLDAVVEDCVNAVGVDLNT-------ASVPLLTRVAGLTRMMAQNIVAWRDENGQF 530 + +AVV D V G+ ++ AS+ V + E Sbjct: 162 ESGEVFEAVVSDVV-KGGLVVDLGVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPE 220 Query: 531 QNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDASTVHPEAYPVVERILAATQQALKDL 590 NR L + + + Q L + ++ + + I Sbjct: 221 NNRVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDG------ 274 Query: 591 MGNSSELRNLKASDFTDEKFGVPTVTDIIKELEKPGRDPRPEFKTAQFADGVETMNDLQP 650 + + S++ + + VT + ++ K Q Sbjct: 275 LVHISQISYKHIATPQEVLEEGQKVTVKVIGIDPENERISLSIKATLPGPWDGITEKAQV 334 Query: 651 GMILEGAVTNVTNFGAFVDI 670 G +LEG V + FGAFV+I Sbjct: 335 GSVLEGKVVRLVTFGAFVEI 354 Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 1/95 (1%) Query: 618 IIKELEKPGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDI-GVHQDG 676 + ELE P + + + G + G VT+V + +V I G DG Sbjct: 45 VASELEIPKIRLTNGGLHMSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDG 104 Query: 677 LVHISSLSNKFVEDPHTVVKAGDIVKVKVLEVDLQ 711 +V IS LSN VE VV GD + + V +V+ Sbjct: 105 VVPISELSNIHVETASDVVSVGDTLDLIVTKVEDD 139 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.133 0.331 Lambda K H 0.267 0.0408 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 3,949,664,060 Number of Sequences: 3077464 Number of extensions: 161255590 Number of successful extensions: 650742 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 2740 Number of HSP's successfully gapped in prelim test: 1344 Number of HSP's that attempted gapping in prelim test: 636985 Number of HSP's gapped (non-prelim): 9020 length of query: 773 length of database: 1,040,396,356 effective HSP length: 137 effective length of query: 636 effective length of database: 618,783,788 effective search space: 393546489168 effective search space used: 393546489168 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 97 (42.0 bits)