18 d3prna_ Probab=69.62   E-value=5.9  Score=17.00  Aligned_columns=256  Identities=14%

Q ss_pred             EEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEEECEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf             77999999998613578877544331000026678988870315004788788886653103577676565566667766
Q batch____        40 TLTGGIYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAAFTAIEMAENGDSSHPNEIAFSKSNKA  119 (468)
Q Consensus        40 ~~~~~lr~~y~~rd~~~~~~~~~~~~~~~~~~~g~~L~~~Sg~~~g~vG~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  119 (468)
                      ++.+.+|.--...+.+...      .+........+|.++ |-.+  ++=|+.+....++..+.+.....          
T Consensus         3 tl~G~~~~g~~y~~~~~~~------~~~t~~~~~sRlg~~-G~~~--l~~Gl~~~~~~e~~~~~~~~~~~----------   63 (289)
T d3prna_           3 SLNGYGRFGLQYVEDRGVG------LEDTIISSRLRINIV-GTTE--TDQGVTFGAKLRMQWDDGDAFAG----------   63 (289)
T ss_dssp             EEEEEEEEEEEEETTCSTT------CCSEEEEEEEEEEEE-EEEC--CTTSCEEEEEEEEEEETTCGGGC----------
T ss_pred             EEEEEEEEEEEEECCCCCC------CCCCCEEECCEEEEE-EEEE--ECCCEEEEEEEEEEEECCCCCCC----------
T ss_conf             8988999999996376777------544201204176899-9898--57957999999977506876777----------


Q ss_pred             CCCCCCCCCCCCEEEEEEEEEEECCEEEEEEEE------------------------------EEEEEEEECCCCCCCCC
Q ss_conf             766555551121123589999952359996058------------------------------63012885247633711
Q batch____       120 YDEDWSGDKSGISLYKAAAKFKYGPVWARAGYI------------------------------QPTGQTLLAPHWSFMPG  169 (468)
Q Consensus       120 ~~~~~~~~~~~~~l~~a~lk~k~~~T~~k~G~q------------------------------~~~~P~~~~~d~R~~P~  169 (468)
                                 .....+++-.+..-=+|++|||                              ............+-...
T Consensus        64 -----------~~~r~~~vgl~g~~G~v~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (289)
T d3prna_          64 -----------TAGNAAQFWTSYNGVTVSVGNVDTAFDSVALTYDSEMGYEWSSFGDAQSSFFAYNSKYDASGALDNYNG  132 (289)
T ss_dssp             -----------CCBCCCEEEEEETTEEEEEESCCCHHHHSSSTTTTCBTTTTBCTTSCCSCCCCCCCSCCTTSTTTTCEE
T ss_pred             -----------CCCCEEEEEEECCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             -----------655327999965976999722215210011022244532233334554443222323334354224418


Q ss_pred             EEEEEEEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEEC-CHHE
Q ss_conf             588899984257773122599999974110576543221002567777564899999861588489999988611-1212
Q batch____       170 TYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKVDYLHSFGAKYDFKNNFVLEAAFGQAE-GYID  248 (468)
Q Consensus       170 tf~G~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~Ga~Y~~~~~l~~~~~~~~~~-D~~~  248 (468)
                      .+.-.         ++.++++...+..............            .+.+++.|+ ...+.+.+-|.... ....
T Consensus       133 ~y~s~---------~~~Gf~~~asy~~~~~~~~~~~~~~------------~~~~~~~Y~-~g~~~~~~~y~~~~~~~~~  190 (289)
T d3prna_         133 IAVTY---------SISGVNLYLSYVDPDQTVDSSLVTE------------EFGIAADWS-NDMISLAAAYTTDAGGIVD  190 (289)
T ss_dssp             EEEEE---------ECSSEEEEEEEEETTTTSCGGGSCC------------EEEEEEEEE-CSSEEEEEEEEESGGGCTT
T ss_pred             EEEEE---------EECCEEEEEEECCCCCCCCCCCCCC------------EEEEEEEEC-CCCEEEEEEEEECCCCCCC
T ss_conf             99842---------2077499999405887756666650------------689999813-5654999998511467776


Q ss_pred             EEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCC
Q ss_conf             24335588863157503678899876236420136654551489999986430466358999999850777640013442
Q batch____       249 QYFAKASYKFDIAGSPLTTSYQFYGTRDKVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRM  328 (468)
Q Consensus       249 ~~y~~~~y~~~l~~~~l~~~~~y~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~y~~~~~d~~~~~~~~~~  328 (468)
                      .....+.-...++...+......-....+          +...+.+++.+..   ++..+.+.|.+.+.|          
T Consensus       191 ~~~~~~g~~y~~~~~~~~~~~~~~~~~~~----------~~~~~~lg~~Y~~---g~~t~~a~y~~~~~d----------  247 (289)
T d3prna_         191 NDIAFVGAAYKFNDAGTVGLNWYDNGLST----------AGDQVTLYGNYAF---GATTVRAYVSDIDRA----------  247 (289)
T ss_dssp             CCEEEEEEEECCSSSEEEEEEEEECTTST----------TCSEEEEEEEEEE---TTEEEEEEEEEECST----------
T ss_pred             CCEEEEEEEEEECCEEEEEEEECCCCCCC----------CCEEEEEEEEEEE---CCEEEEEEEEEECCC----------
T ss_conf             41367776786222278888522456777----------6306999999991---670999999961246----------


Q ss_pred             CCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf             35556667402566520003446882799999960403338766169999999760235555565555555666641158
Q batch____       329 TPTYASSNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLPGFAIGASYVYAWDAKPATWQSNPDAYYDKNRTIEESA  408 (468)
Q Consensus       329 ~~~~~~~~~~~~~~~~~~~df~~~~e~s~~~~~~Ydf~~~GlpGL~~~~~Y~~g~~~~~~~~~~~~~~~~~~~~~~~~~E  408 (468)
                                             .+...|.+++.|+|.    |++++...+.+.+.                    +..-
T Consensus       248 -----------------------~~~~~~~lg~~Y~l~----~~~~l~~~~g~~~~--------------------~~t~  280 (289)
T d3prna_         248 -----------------------GADTAYGIGADYQFA----EGVKVSGSVQSGFA--------------------NETV  280 (289)
T ss_dssp             -----------------------TCCCEEEEEEEEEEE----TTEEEEEEEEECTT--------------------CCEE
T ss_pred             -----------------------CCCEEEEEEEEEECC----CCEEEEEEEEECCC--------------------CCCE
T ss_conf             -----------------------642169999999568----75799999874157--------------------7507


Q ss_pred             EEEEEEEEE
Q ss_conf             999999984
Q batch____       409 YSLDAVYTI  417 (468)
Q Consensus       409 ~d~~~~Y~~  417 (468)
                      .++-++|.|
T Consensus       281 a~~Gv~~~F  289 (289)
T d3prna_         281 ADVGVRFDF  289 (289)
T ss_dssp             EEEEEEEEC
T ss_pred             EEEEEEEEC
T ss_conf             898799879