399 c1rktA_ Probab=47.56   E-value=15  Score=16.43  Aligned_columns=47  Identities=17%

Q ss_pred             CCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHH
Q ss_conf             8313357899-89999999999998689999990877899999948993799
Q batch____         4 SAQQLAAQKN-LSYVLAEKLAQRILKGEYEPGTILPGEIELGEQFGVSRTAV   54 (230)
Q Consensus         4 ~~~~~~~~~~-l~~~i~~~l~~~I~~g~~~pG~~LPse~~La~~~~VSr~tV   54 (230)
                      +|+....++. ..++|.+.-...+....|   +.+ |.+++|+.-|||+.|+
T Consensus         1 sPr~~~~~~~~~r~~Il~aA~~lf~~~G~---~~~-si~~Ia~~agvs~~ti   48 (204)
T c1rktA_           1 SPKVTKEHKDKRQAEILEAAKTVFKRKGF---ELT-TXKDVVEESGFSRGGV   48 (204)
T ss_dssp             CCTTHHHHHHHHHHHHHHHHHHHHHHHCS---TTC-CHHHHHHHHTSCHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHCH---HCC-CHHHHHHHHCCCHHHH
T ss_conf             97779899999999999999999996192---008-8999999958999997