Phyre 2 alignment of P39829 with d1v8qa_

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Job Description | P39829
Confidence | 10.74% | Date | Thu Jan 5 12:00:53 GMT 2012
Rank | 76 | Aligned Residues | 19
% Identity | 37% | Template | d1v8qa_
SCOP info | Barrel-sandwich hybrid | Ribosomal L27 protein-like | Ribosomal L27 protein
Resolution | 2.80

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | N | I | E | I | R | Q | E | T | P | T | A | F | Y | I | K | V | H | D | T | D | N | V | A | I
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template Sequence |  | N | I | L | V | R | Q | R | G | T | . | . | . | . | . | R | F | K | P | G | K | N | V | G | M
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  | . | . | . | . | . | S | S |  |  |  | T | T |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 35 | . | . | . | . | 40 | . | . | . |  |  |  |  |  | . | . | . | . | . | . | 50 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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