Phyre 2 alignment of P39829 with c3ka5A_

Return to main results | Retrieve Phyre Job Id

Job Description | P39829
Confidence | 23.50% | Date | Thu Jan 5 12:00:53 GMT 2012
Rank | 28 | Aligned Residues | 10
% Identity | 40% | Template | c3ka5A_
PDB info | PDB header:chaperone | Chain: A: PDB Molecule:ribosome-associated protein y (psrp-1); | PDBTitle: crystal structure of ribosome-associated protein y (psrp-1)2 from clostridium acetobutylicum. northeast structural3 genomics consortium target id car123a
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 123 | . | . | . | . | . | . | 130 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | Y | R | N | A | D | G | S | V | G | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | K | R | K | D | G | N | Y | G | L
Template Known Secondary structure |  |  |  |  | T | T | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |
|  | 44 | . | . | . | . | . | 50 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions