Phyre 2 alignment of P39829 with c3g8rA_

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Job Description | P39829
Confidence | 48.70% | Date | Thu Jan 5 12:00:53 GMT 2012
Rank | 9 | Aligned Residues | 51
% Identity | 12% | Template | c3g8rA_
PDB info | PDB header:biosynthetic protein | Chain: A: PDB Molecule:probable spore coat polysaccharide biosynthesis protein e; | PDBTitle: crystal structure of putative spore coat polysaccharide biosynthesis2 protein e from chromobacterium violaceum atcc 12472
Resolution | 2.49 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |  |  |  |  | . | . |  |  |  | . | . | . | . | . | . | . | 70 | . | . | . | . | . |  | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | G | L | E | L | I | E | H | I | P | Q | G | H | K | V | A | L | L | D | I | . | . | . | . | P | A | . | . | . | N | G | E | I | I | R | Y | G | E | V | I | G | Y | . | A | V | R | A | I | P | R | G | S | W | I | D | E | S | M | V | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | V | F | A | T | R | P | V | A | A | G | E | A | L | T | A | D | N | V | S | F | A | F | P | P | V | E | G | Q | L | T | A | N | E | W | S | K | Y | V | R | Y | T | A | K | T | P | I | A | A | D | A | P | V | X | A | A | D | L | E
Template Known Secondary structure |  |  |  |  |  | S | S |  | B |  | T | T |  | B |  | B | T | T | B |  |  |  |  | S |  |  |  | T | T | B |  | B | G | G | G |  |  | S | S |  |  |  |  |  | S | S |  | B |  | T | T |  | B |  | B | G | G | G |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 281 | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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