Phyre 2 alignment of P39829 with c2hdnJ_

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Job Description | P39829
Confidence | 10.71% | Date | Thu Jan 5 12:00:53 GMT 2012
Rank | 78 | Aligned Residues | 28
% Identity | 14% | Template | c2hdnJ_
PDB info | PDB header:translation | Chain: J: PDB Molecule:elongation factor ef-tu; | PDBTitle: trypsin-modified elongation factor tu in complex with2 tetracycline at 2.8 angstrom resolution
Resolution | 2.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 410 | . | . | . | . | . | . | . | . |  | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | L | I | Y | A | A | T | P | A | S | . | D | F | V | C | G | T | Q | Q | V | A | S | G | I | T | V | Q | V | F | T
Query Conservation |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | Y | A | H | V | D | C | P | G | H | A | D | Y | V | K | N | M | I | T | G | A | A | Q | M | D | G | A | I | L | V
Template Known Secondary structure |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | S | S |  |  | S | S |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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