16/01/2012 01:47:13 : INFO  : Run start: Mon Jan 16 01:47:13 GMT 2012
16/01/2012 01:47:13 : INFO  : Initialised job
16/01/2012 01:47:13 : INFO  : Renaming log file 'phyre2_20120116_014713.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/phyre_20120116_014713.log'
16/01/2012 01:47:13 : INFO  : Initialised job:
Sequence
>batch____
MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI
PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI
VSLQDEKHVGFQSMVEDILQIAERHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT

16/01/2012 01:47:13 : INFO  : Checked sequence
16/01/2012 01:47:13 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 01:47:13 : INFO  : PSI-BLAST 3 iterations
16/01/2012 01:49:50 : INFO  : PSI-BLAST 5 iterations
16/01/2012 01:52:43 : INFO  : Finished PSI-BLAST
16/01/2012 01:52:43 : INFO  : Running Buildali to generate a3m file
16/01/2012 02:00:51 : INFO  : Converting to HMM
16/01/2012 02:00:51 : INFO  : Calibrating HMM
16/01/2012 02:01:05 : INFO  : Searching HMM database
16/01/2012 02:10:26 : INFO  : Finished buildali
16/01/2012 02:10:26 : INFO  : Predicting secondary structure
16/01/2012 02:10:27 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 02:10:27 : INFO  : Predicting Disordered regions
16/01/2012 02:10:27 : INFO  : Predicted Disorder (Disopred)
16/01/2012 02:10:27 : INFO  : Running memsat_svm check
16/01/2012 02:12:47 : INFO  : Globular protein
16/01/2012 02:12:47 : INFO  : Predicted Transmembrane (memsat_svm) ID '5823a77f3a0672ae'
16/01/2012 02:12:47 : INFO  : Initialising fold library search
16/01/2012 02:12:47 : INFO  : Initialised search input
16/01/2012 02:12:47 : INFO  : Building Ensemble models
16/01/2012 02:12:47 : INFO  : Building hh.c3lazB_.model.1.pdb
16/01/2012 02:12:48 : INFO  : Building hh.c1qd1A_.model.2.pdb
16/01/2012 02:12:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/hh.c1qd1A_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/c1qd1A_.3.pdb
16/01/2012 02:12:48 : INFO  : Building hh.c3degC_.model.3.pdb
16/01/2012 02:12:48 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/hh.c3degC_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/c3degC_.4.pdb
16/01/2012 02:12:48 : INFO  : Building hh.d2nu7b1.model.4.pdb
16/01/2012 02:12:49 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/hh.d2nu7b1.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/d2nu7b1.5.pdb
16/01/2012 02:12:49 : INFO  : Building hh.c3cwcB_.model.5.pdb
16/01/2012 02:12:50 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/hh.c3cwcB_.model.5.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/5823a77f3a0672ae/c3cwcB_.7.pdb
16/01/2012 02:12:50 : INFO  : Building c3lazB_.1.pdb
16/01/2012 02:12:50 : INFO  : Building c3k3sG_.2.pdb
16/01/2012 02:12:50 : INFO  : Building c1qd1A_.3.pdb
16/01/2012 02:12:51 : INFO  : Building c3degC_.4.pdb
16/01/2012 02:12:51 : INFO  : Building d2nu7b1.5.pdb
16/01/2012 02:12:51 : INFO  : Building c1tt9B_.6.pdb
16/01/2012 02:12:52 : INFO  : Building c3cwcB_.7.pdb
16/01/2012 02:12:52 : INFO  : Building d2zdra1.8.pdb
16/01/2012 02:12:53 : INFO  : Building c3g8rA_.9.pdb
16/01/2012 02:12:53 : INFO  : Building c3b8hA_.10.pdb
16/01/2012 02:12:54 : INFO  : Building d2f69a2.11.pdb
16/01/2012 02:12:54 : INFO  : Building c3tr5C_.12.pdb
16/01/2012 02:12:55 : INFO  : Building d1csha_.13.pdb
16/01/2012 02:12:55 : INFO  : Building c3izq1_.14.pdb
16/01/2012 02:12:56 : INFO  : Building c3frnA_.15.pdb
16/01/2012 02:12:56 : INFO  : Building c2elfA_.16.pdb
16/01/2012 02:12:57 : INFO  : Building c3cnlA_.17.pdb
16/01/2012 02:12:57 : INFO  : Building c3m7oB_.18.pdb
16/01/2012 02:12:58 : INFO  : Building c2ywfA_.19.pdb
16/01/2012 02:12:58 : INFO  : Building d1puja_.20.pdb
16/01/2012 02:13:05 : INFO  : Finished HH model building
16/01/2012 02:13:05 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 02:13:09 : INFO  : html domain output complete ID '5823a77f3a0672ae'
16/01/2012 02:26:23 : INFO  : Run end  : Mon Jan 16 02:26:23 GMT 2012
