BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (138 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=G... 201 4e-51 UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax... 190 1e-47 UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=G... 182 3e-45 UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Ent... 160 8e-39 UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Ga... 155 5e-37 UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax... 152 4e-36 UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiel... 151 7e-36 UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gam... 147 9e-35 UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Ps... 145 5e-34 UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gam... 143 2e-33 UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alc... 141 7e-33 UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Ga... 140 1e-32 UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredin... 139 2e-32 UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nit... 137 9e-32 UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Ent... 137 1e-31 UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Ga... 136 2e-31 UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickett... 136 2e-31 UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothi... 132 4e-30 UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma p... 130 2e-29 UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Cox... 124 1e-27 UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax... 124 1e-27 UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Can... 124 1e-27 UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax... 123 2e-27 UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betapro... 122 5e-27 UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Ac... 117 2e-25 UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein ... 117 2e-25 UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Bet... 116 3e-25 UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallion... 115 5e-25 UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thi... 113 2e-24 UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bor... 113 2e-24 UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 112 3e-24 UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Nei... 112 4e-24 UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Bu... 109 3e-23 UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betapro... 108 4e-23 UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibact... 108 4e-23 UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax... 107 1e-22 UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter ... 106 3e-22 UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thi... 104 1e-21 UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Fr... 104 1e-21 UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Met... 103 2e-21 UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Be... 102 3e-21 UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psy... 102 5e-21 UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobactera... 101 6e-21 UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Bet... 101 9e-21 UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Pol... 100 1e-20 UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitroso... 100 1e-20 UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothi... 100 2e-20 UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma p... 100 2e-20 UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydro... 100 2e-20 UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomon... 98 1e-19 UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betapro... 95 7e-19 UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1... 92 7e-18 UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 92 7e-18 UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xa... 89 4e-17 UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Ana... 89 5e-17 UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidith... 88 1e-16 UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Bu... 87 1e-16 UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermom... 87 2e-16 UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicycl... 86 4e-16 UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myx... 84 1e-15 UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteri... 82 5e-15 UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Aci... 82 6e-15 UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Fi... 82 7e-15 UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostri... 81 1e-14 UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Ta... 80 2e-14 UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Cl... 80 2e-14 UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomo... 79 3e-14 UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Pep... 79 4e-14 UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Aci... 79 6e-14 UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonucl... 78 8e-14 UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacteri... 78 9e-14 UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Fi... 77 1e-13 UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecali... 77 1e-13 UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphi... 77 2e-13 UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttle... 76 3e-13 UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacter... 76 3e-13 UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidoba... 76 4e-13 UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verruco... 75 6e-13 UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syn... 75 6e-13 UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=unc... 75 1e-12 UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opi... 74 1e-12 UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clo... 74 1e-12 UniRef50_C5JAL6 Resolvase family protein, holliday junction-type... 74 2e-12 UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta pr... 73 2e-12 UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chl... 72 6e-12 UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteri... 72 6e-12 UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Nat... 72 7e-12 UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Sla... 71 9e-12 UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=... 71 1e-11 UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sph... 71 1e-11 UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostri... 71 1e-11 UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=La... 71 1e-11 UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Myc... 70 1e-11 UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=B... 70 2e-11 UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bactero... 70 2e-11 UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Al... 70 2e-11 UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV1... 69 3e-11 UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Act... 69 3e-11 UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dic... 69 5e-11 UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Plancto... 69 6e-11 UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zym... 69 7e-11 UniRef50_UPI000050F766 Holliday junction resolvase-like protein ... 68 7e-11 UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerof... 68 8e-11 UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Koc... 68 8e-11 UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Pro... 68 9e-11 UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermob... 68 9e-11 UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alp... 68 1e-10 UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonucl... 68 1e-10 UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Myc... 67 1e-10 UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Corioba... 67 2e-10 UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dic... 67 2e-10 UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Deh... 67 2e-10 UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mob... 67 2e-10 UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Ori... 67 2e-10 UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyp... 67 2e-10 UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rho... 66 3e-10 UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Maripro... 66 3e-10 UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelo... 66 3e-10 UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Sub... 66 4e-10 UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chl... 65 7e-10 UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9... 65 7e-10 UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alp... 65 7e-10 UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpeto... 65 8e-10 UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eub... 65 9e-10 UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Act... 65 9e-10 UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylo... 64 1e-09 UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protei... 64 1e-09 UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellu... 64 1e-09 UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Myc... 64 1e-09 UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Ace... 64 1e-09 UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Cam... 63 2e-09 UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bif... 63 2e-09 UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wol... 63 4e-09 UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, s... 63 4e-09 UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Can... 62 4e-09 UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gem... 62 4e-09 UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Ri... 62 5e-09 UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alp... 62 5e-09 UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococ... 62 5e-09 UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodoth... 62 5e-09 UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR 62 5e-09 UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Al... 62 5e-09 UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha p... 61 9e-09 UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cy... 61 1e-08 UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Therman... 61 1e-08 UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha p... 61 1e-08 UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Can... 61 1e-08 UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Cla... 60 2e-08 UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candida... 60 2e-08 UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coproth... 60 2e-08 UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candida... 60 2e-08 UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Myc... 60 2e-08 UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax... 59 3e-08 UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Cor... 59 3e-08 UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Ac... 59 4e-08 UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfo... 59 4e-08 UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax... 59 4e-08 UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Pro... 59 4e-08 UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastop... 59 5e-08 UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonif... 59 5e-08 UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chl... 59 6e-08 UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verruco... 59 7e-08 UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Fi... 58 8e-08 UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Ana... 58 9e-08 UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Al... 58 1e-07 UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Glo... 57 1e-07 UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hyd... 57 2e-07 UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax... 57 2e-07 UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tro... 57 2e-07 UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothr... 57 2e-07 UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Myc... 57 2e-07 UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylo... 57 2e-07 UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collins... 57 3e-07 UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Des... 56 3e-07 UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavoba... 56 3e-07 UniRef50_B7FTD6 Predicted protein (Fragment) n=1 Tax=Phaeodactyl... 56 4e-07 UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Ba... 56 4e-07 UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=... 55 5e-07 UniRef50_A5B8B0 Putative uncharacterized protein n=1 Tax=Vitis v... 55 5e-07 UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=The... 55 8e-07 UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylo... 55 1e-06 UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aqu... 54 1e-06 UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax... 54 1e-06 UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Ba... 54 1e-06 UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethios... 54 2e-06 UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Des... 54 2e-06 UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Syn... 54 2e-06 UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sph... 54 2e-06 UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mol... 53 2e-06 UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 53 3e-06 UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax... 53 3e-06 UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mob... 53 3e-06 UniRef50_D2NT33 Predicted endonuclease involved in recombination... 53 4e-06 UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT 52 5e-06 UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Des... 52 5e-06 UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Can... 52 6e-06 UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Act... 52 7e-06 UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax... 52 7e-06 UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkerma... 52 7e-06 UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=The... 52 9e-06 UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Ach... 51 9e-06 UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitre... 51 9e-06 UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachl... 51 1e-05 UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Myc... 51 1e-05 UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostri... 51 1e-05 UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Ba... 51 1e-05 UniRef50_A9F903 Putative Hollyday junction resolvase n=1 Tax=Sor... 50 2e-05 UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrich... 50 2e-05 UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrob... 50 2e-05 UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Myc... 50 2e-05 UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens ... 50 2e-05 UniRef50_Q9X1N1 Putative Holliday junction resolvase n=6 Tax=The... 50 3e-05 UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clo... 50 3e-05 UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibac... 50 3e-05 UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinom... 49 4e-05 UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Can... 49 4e-05 UniRef50_A6LJS1 Holliday junction resolvase YqgF n=2 Tax=Thermos... 49 4e-05 UniRef50_A9BF14 Holliday junction resolvase YqgF n=1 Tax=Petroto... 49 5e-05 UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimi... 49 6e-05 UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bi... 49 6e-05 UniRef50_A7H4H6 Putative Holliday junction resolvase n=21 Tax=Ep... 49 7e-05 UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostri... 48 8e-05 UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothe... 48 1e-04 UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Act... 48 1e-04 UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 48 1e-04 UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Plancto... 48 1e-04 UniRef50_Q1CUG7 Putative Holliday junction resolvase n=12 Tax=He... 47 1e-04 UniRef50_A8F455 Holliday junction resolvase YqgF n=1 Tax=Thermot... 47 2e-04 UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Ch... 47 2e-04 UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Can... 47 2e-04 UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachys... 46 4e-04 UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Myc... 46 4e-04 UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Sal... 46 5e-04 UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibroba... 45 6e-04 UniRef50_UPI00019786D3 Holliday junction resolvase-like protein ... 45 6e-04 UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=ce... 45 7e-04 UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Ba... 45 0.001 UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Myc... 44 0.001 UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ur... 44 0.001 UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Ac... 44 0.001 UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Microco... 44 0.002 UniRef50_C3XGU4 Putative uncharacterized protein (Fragment) n=1 ... 43 0.003 UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Myc... 43 0.003 UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia... 42 0.006 UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira ... 42 0.008 UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea s... 42 0.009 UniRef50_A4S7X0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S... 41 0.010 UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Act... 41 0.011 UniRef50_UPI00016999DE hypothetical protein Epers_02645 n=1 Tax=... 40 0.016 UniRef50_Q47N67 Putative Holliday junction resolvase n=10 Tax=Ac... 40 0.018 >UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=Gammaproteobacteria RepID=RUVX_HAES1 Length = 141 Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 96/137 (70%), Positives = 115/137 (83%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 MS T+LAFDFGTKSIG AVGQ ITGTA+ LPA KAQDG PDW IE+ LK+WQP+ ++VG Sbjct: 1 MSITVLAFDFGTKSIGCAVGQSITGTAQALPAFKAQDGIPDWLKIEKCLKDWQPNIVVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPLNMDG+EQ LT ARKFANR++GRFGV+V+L DERL+T +AR +F++GGYRAL K K Sbjct: 61 LPLNMDGSEQDLTHLARKFANRLNGRFGVKVELQDERLTTKQARDEIFQRGGYRALKKEK 120 Query: 121 VDSASAVIILESYFEQG 137 VDS SA +ILES+FE G Sbjct: 121 VDSISACLILESWFENG 137 >UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K449_HAMD5 Length = 145 Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 87/130 (66%), Positives = 108/130 (83%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGTKSIGVA+GQ IT TARPL A K+++GTPDW IERLL EW PD ++VG PLN Sbjct: 6 IIAFDFGTKSIGVAIGQNITETARPLTACKSKNGTPDWIKIERLLSEWYPDLVVVGFPLN 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTEQP+T AR+F + ++ RFG++V HDERLST EAR+ LF++GGY+ALNK VD+ Sbjct: 66 MDGTEQPITESARQFGHALYRRFGIKVVFHDERLSTAEARAYLFDKGGYQALNKSSVDAT 125 Query: 125 SAVIILESYF 134 SAVIILES+F Sbjct: 126 SAVIILESWF 135 >UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=Gammaproteobacteria RepID=RUVX_PSEHT Length = 149 Score = 182 bits (461), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 81/135 (60%), Positives = 107/135 (79%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FDFGTKSIG+A+GQ +TG+A L A+KAQDG P+W+ I + EWQPD ++VGLPL Sbjct: 13 TVMGFDFGTKSIGIAIGQELTGSASSLKAVKAQDGIPNWDDIAVQVNEWQPDLMVVGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGT Q +T +A+KFANR+H + + V+ DERL+T +A++ LFEQGGY+ L KGKVD+ Sbjct: 73 NMDGTAQEVTFKAKKFANRLHNHYAIPVETQDERLTTADAKARLFEQGGYKNLGKGKVDN 132 Query: 124 ASAVIILESYFEQGY 138 SAVIILES+FE Y Sbjct: 133 MSAVIILESFFETSY 147 >UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Enterobacteriaceae RepID=RUVX_BUCA5 Length = 135 Score = 160 bits (406), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 68/132 (51%), Positives = 101/132 (76%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFG K IGVAVG+ IT RPL + AQ+G P+W +++ L++ WQP I+VGLPLN Sbjct: 3 VIAFDFGIKKIGVAVGENITKKGRPLSVLNAQNGCPNWQLVKNLIQYWQPQFIVVGLPLN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 ++GT+Q +T ++ KFAN + +F + VK+HDERL+TVEA+S +F++ G++ L + K+ S Sbjct: 63 INGTKQKITNKSEKFANLLKYKFNIVVKMHDERLTTVEAKSIIFKKNGFKGLKEEKIHSC 122 Query: 125 SAVIILESYFEQ 136 +AVIILES+F Q Sbjct: 123 AAVIILESWFNQ 134 >UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Gammaproteobacteria RepID=RUVX_LEGPL Length = 139 Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 72/135 (53%), Positives = 95/135 (70%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L FDFG K IGVAVGQR+T +A PL I+A+ G PDWN I++++ +W P +IVGLP Sbjct: 4 GVYLGFDFGYKRIGVAVGQRLTCSASPLSTIEAKAGIPDWNTIQKVITQWNPQALIVGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +D E T+ AR+FA ++H +F + V L DERLSTVEAR LFEQGGYR + K +VD Sbjct: 64 TCIDDRELYTTSAARRFAKQLHKQFSLPVHLVDERLSTVEARGYLFEQGGYRQIKKAEVD 123 Query: 123 SASAVIILESYFEQG 137 S +A +ILE + +Q Sbjct: 124 SIAACVILEQWLQQS 138 >UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8B2_9ALTE Length = 140 Score = 152 bits (383), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 68/132 (51%), Positives = 94/132 (71%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGT+ IGVAVGQ + G PL I A+DGTPDW +E+LL EW+PD ++VGLPLN Sbjct: 9 VMAFDFGTRRIGVAVGQEMLGRGEPLTMIAARDGTPDWTQLEKLLHEWRPDLVVVGLPLN 68 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +E + RARKF R+HGRF V V++ DERL++ +A+ + GG R + +D Sbjct: 69 MDDSENEMCVRARKFGKRLHGRFHVTVEMVDERLTSYQAKGEVMAAGGSRNYRRDGIDDR 128 Query: 125 SAVIILESYFEQ 136 +AV+ILE++F Q Sbjct: 129 AAVLILETWFNQ 140 >UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R793_KANKD Length = 145 Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 66/131 (50%), Positives = 92/131 (70%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L FDFG K +GVA G R +++ L + + PDW +IE L++EW + +VGLPLNM Sbjct: 11 LCFDFGEKRLGVATGVRTQMSSQALTVLAVTNDQPDWKLIENLIREWNVEAFVVGLPLNM 70 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 D +EQ LT +ARKFANR+HGRFG+ LHDERLS+ E + L+E GGY+ L + +D+ + Sbjct: 71 DDSEQELTQKARKFANRLHGRFGLPTHLHDERLSSAEVKDYLYEIGGYKKLKQNPIDAYA 130 Query: 126 AVIILESYFEQ 136 A +IL+S+FEQ Sbjct: 131 AELILKSFFEQ 141 >UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gammaproteobacteria RepID=RUVX_PSEPK Length = 141 Score = 147 bits (372), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 70/132 (53%), Positives = 94/132 (71%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL FD+G+K IGVAVGQ ITG AR L +KAQ+G PDW +E+L+ EW+PD I+VGLPLN Sbjct: 7 LLGFDYGSKQIGVAVGQVITGQARELCTLKAQNGVPDWAQVEKLIAEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR-ALNKGKVDS 123 MDGT ++ARA KFA R++GRF + V HDERL+T EA+ +GG R + VD+ Sbjct: 67 MDGTPSEMSARAEKFARRLNGRFNLPVHTHDERLTTFEAKGERMARGGQRGSYRDNPVDA 126 Query: 124 ASAVIILESYFE 135 +A ++L+ + E Sbjct: 127 IAAALLLQGWLE 138 >UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Pseudomonas RepID=RUVX_PSE14 Length = 146 Score = 145 bits (365), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 67/133 (50%), Positives = 95/133 (71%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL D+GTK IGVAVGQ ITG AR L +KAQ+G PDW+ ++ L+ EW+PD I+VGLPLN Sbjct: 7 LLGIDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWDKVQALINEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR-ALNKGKVDS 123 MDGT ++ARA KF+ +++GRFGV V HDERL+T EA+ +GG + + VD+ Sbjct: 67 MDGTPSDMSARAEKFSRKLNGRFGVTVYTHDERLTTFEAKGERMARGGQKGSYRNNPVDA 126 Query: 124 ASAVIILESYFEQ 136 +A ++L+ + ++ Sbjct: 127 IAAALLLQGWLDE 139 >UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gammaproteobacteria RepID=RUVX_AZOVD Length = 142 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 72/138 (52%), Positives = 97/138 (70%), Gaps = 2/138 (1%) Query: 1 MSGT--LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEII 58 MSG LL FD+GT+ IGVAVGQ ITG AR L +KAQ+G PDW+ +E+L+KEW+PD ++ Sbjct: 1 MSGPRLLLGFDYGTRQIGVAVGQAITGQARELCVLKAQNGVPDWSRVEQLVKEWRPDAMV 60 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 VGLPLNMDGT ++ RA +FA R+HGRFG+ V HDERL+T EA+ QG + Sbjct: 61 VGLPLNMDGTPSEMSERAERFARRLHGRFGLPVHTHDERLTTFEAKGYRLAQGQRDGYRR 120 Query: 119 GKVDSASAVIILESYFEQ 136 VD+ +A ++LE + + Sbjct: 121 RPVDALAAALLLEGWLAE 138 >UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alcanivorax RepID=RUVX_ALCBS Length = 133 Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 71/130 (54%), Positives = 94/130 (72%), Gaps = 5/130 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFD+GT+ IGVA G + GTA PL A+ ++ P+W+ I LLKEW+P+ ++VGLPLN Sbjct: 2 ILAFDYGTQKIGVASGNELLGTATPLKALPCKNTQPNWDDIAALLKEWEPEALVVGLPLN 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG++ T RARKFANR+HGRFG +V L DERLST EAR E+ G + + +VDS Sbjct: 62 MDGSDSESTVRARKFANRLHGRFGKKVWLIDERLSTREAR----ERTGIKKAD-SRVDSM 116 Query: 125 SAVIILESYF 134 +AVII E +F Sbjct: 117 AAVIIAEGFF 126 >UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Gammaproteobacteria RepID=RUVX_HAHCH Length = 158 Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 68/133 (51%), Positives = 91/133 (68%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 T++ FDFG K G AVGQ ++ TA PL I AQDG P W IE LL+EW+P +IVG P Sbjct: 2 ATVVGFDFGLKRFGAAVGQSVSMTASPLKEIPAQDGIPRWEAIEALLEEWKPALVIVGEP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LNMDG+ + RARKFA R+HGR+ + V++ DERL++ EA+S + E+ G R + VD Sbjct: 62 LNMDGSVSEMALRARKFARRLHGRYNLRVEMADERLTSSEAKSMVRERYGQRDFGRFAVD 121 Query: 123 SASAVIILESYFE 135 S +AV I+ES+ E Sbjct: 122 SIAAVFIVESWLE 134 >UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLK5_TERTT Length = 146 Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 69/136 (50%), Positives = 95/136 (69%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+LAFDFGT+SIGVAVGQ +T +A LP +KA+DG PDW +E+L +W+P+ ++VGLP+ Sbjct: 9 TILAFDFGTRSIGVAVGQTLTQSASELPTLKAKDGIPDWQQLEQLFSDWRPNLVVVGLPV 68 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEAR---SGLFEQGGYRALNKGK 120 NMDG+E +T RARKF NR++GRF V DERL+T A+ + +G YRA Sbjct: 69 NMDGSEMEMTRRARKFGNRLNGRFNQTVAFFDERLTTRAAKEEAAAHGHRGNYRA---KP 125 Query: 121 VDSASAVIILESYFEQ 136 VDS +A +ILE + + Sbjct: 126 VDSIAARLILEGWMSE 141 >UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nitrosococcus oceani RepID=RUVX_NITOC Length = 152 Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust. Identities = 66/132 (50%), Positives = 92/132 (69%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L FDFG + IGVAVGQ +T +A PL +KA +G PDWN I +L+++W PD +IVGLPLN Sbjct: 16 VLGFDFGLRYIGVAVGQEVTHSANPLTTLKAHEGNPDWNQITQLIRQWNPDLLIVGLPLN 75 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +EQ LT AR+F +R+HGR+G+ V+ DERLSTVEAR L + +G +D Sbjct: 76 MDQSEQFLTKAARRFGHRLHGRYGLAVEWVDERLSTVEARERLNIKSSASGRRQG-IDQM 134 Query: 125 SAVIILESYFEQ 136 +A IL+++ + Sbjct: 135 AAQCILQTWLTE 146 >UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Enterobacteriaceae RepID=RUVX_WIGBR Length = 144 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/137 (48%), Positives = 97/137 (70%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L++FDFGTK+IGVA+GQ T T++PL ++ G P+W I ++ W+P IIVGL Sbjct: 5 NNLLISFDFGTKNIGVAIGQMKTNTSKPLESVSYVKGVPNWGKINNIILLWEPKYIIVGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMDG+ Q T +A+KFA ++ +F + V +HDERL+T+EA+S LF++ GY+ L K + Sbjct: 65 PLNMDGSYQTSTIKAKKFAKQLRNKFFMPVMMHDERLTTIEAKSVLFKKYGYKGLKKKLI 124 Query: 122 DSASAVIILESYFEQGY 138 DS SAVIIL+S+ Y Sbjct: 125 DSESAVIILDSWMNSIY 141 >UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Gammaproteobacteria RepID=RUVX_CHRSD Length = 148 Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 69/130 (53%), Positives = 88/130 (67%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFDFGT+ IGVAVG + G+A L + A+DG PDW I LL+EWQPD ++VGLPLN Sbjct: 9 VLAFDFGTRRIGVAVGNEMLGSATALAPLPARDGIPDWQQIAALLEEWQPDLLVVGLPLN 68 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE ++ RARKF NR+HGRFG V++ DER ST A+ + G VD Sbjct: 69 MDGTESDMSRRARKFGNRLHGRFGKPVEVFDERGSTRAAKRIARDAGHRGNYRDDGVDGI 128 Query: 125 SAVIILESYF 134 +A +ILES+F Sbjct: 129 AAQLILESFF 138 >UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PPF2_9COXI Length = 139 Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 87/135 (64%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + T++ FDFG K IGVA+GQ A+PL + + G W I +LLK W PD I+VG+ Sbjct: 4 TKTVIGFDFGLKYIGVAIGQTSPSLAQPLTNLSVKKGNLPWEEIAQLLKMWSPDVIVVGV 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P NMDGTEQP+T AR F + RF + V DERL+TVEARS LF GGY+AL K + Sbjct: 64 PFNMDGTEQPITREARNFLMELKNRFEIPVFPVDERLTTVEARSRLFALGGYKALKKKSI 123 Query: 122 DSASAVIILESYFEQ 136 DS +A +I+E + E Sbjct: 124 DSIAAQLIVEIWLEN 138 >UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothiorhodospiraceae RepID=Q0ABT4_ALHEH Length = 144 Score = 132 bits (332), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 68/136 (50%), Positives = 93/136 (68%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT LAFD G + IGVAVG+ +TG R L + A+ G PDW + RLL EW+P ++VG Sbjct: 5 VSGTWLAFDHGDRRIGVAVGEALTGGGRALITLSARAGQPDWEEVGRLLAEWRPQGVVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ DG++ T ARKFA R+HGR+G+ V+L DERLS+ EA + L E+ G G Sbjct: 65 LPLHADGSDSESTRAARKFAQRLHGRYGLRVELVDERLSSHEAAARLSERRGRPTRRPGA 124 Query: 121 VDSASAVIILESYFEQ 136 +DS +A +ILE++F Q Sbjct: 125 LDSEAARVILETWFSQ 140 >UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU73_9GAMM Length = 143 Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 59/132 (44%), Positives = 89/132 (67%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FD+G + IGVA+G + G +PL + A+DG PDW+ IERL+ EWQPD ++VG PL Sbjct: 7 TVMGFDYGLRQIGVAIGNTLLGQGKPLAIVTARDGKPDWSQIERLIGEWQPDHLVVGKPL 66 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG++ + ARA KF+ +++GRF V L DERL++ EA+S ++G +D Sbjct: 67 NMDGSDSEMGARAAKFSRQLNGRFAKPVDLVDERLTSREAKSQSRDRGHNGNYTTDPIDD 126 Query: 124 ASAVIILESYFE 135 +A +IL ++FE Sbjct: 127 EAAALILNTWFE 138 >UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Coxiella burnetii RepID=RUVX_COXB1 Length = 141 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/131 (45%), Positives = 88/131 (67%), Gaps = 2/131 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L FDFG K IGVAVGQ +T +A + +KAQDG DW I+ L++ W + ++VG+P NM Sbjct: 9 LGFDFGMKRIGVAVGQTVTHSANAIAILKAQDGVLDWEKIKMLIETWHANVLVVGIPYNM 68 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+EQ LT ARKFA ++ RFG+ + + DERL+T+EA+ +EQG + +D+ + Sbjct: 69 DGSEQTLTFAARKFARKLQTRFGLPLSMVDERLTTIEAKRQWYEQGLTK--RPQHLDNYA 126 Query: 126 AVIILESYFEQ 136 A +ILE + ++ Sbjct: 127 AKLILEQWLQE 137 >UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2R4_9GAMM Length = 132 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/131 (46%), Positives = 86/131 (65%), Gaps = 3/131 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +AFD+G K IGVAVG + T PL + A+DG P+W I L KEWQP++++VG PLNM Sbjct: 1 MAFDWGLKRIGVAVGNTLLATCEPLCVLNARDGVPNWAAIAELFKEWQPEQLVVGDPLNM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 D + +T RAR+F+ ++ GRF + V L DERL++ EAR L EQG G VD+ + Sbjct: 61 DDSVAEITRRARRFSRQLEGRFNLPVSLTDERLTSREARIQLEEQG---LPYHGAVDAHA 117 Query: 126 AVIILESYFEQ 136 A +IL+S+ + Sbjct: 118 AQLILQSWLAE 128 >UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Candidatus Blochmannia RepID=RUVX_BLOPB Length = 144 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 2/137 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++ FDFGTK IGVA+GQ++T TA+PL +++Q G P+W I + W+P +VGLP Sbjct: 8 GIVMGFDFGTKHIGVAIGQKLTCTAQPLTVLQSQSGVPNWKRIRDIYNTWKPMIFVVGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE--QGGYRALNKGK 120 L +DG+EQP+T A+ FA ++ F V VK+HDER ST EAR F+ A + K Sbjct: 68 LKIDGSEQPITILAKIFAIQLKELFPVPVKMHDERFSTSEARLNYFKYYHDDLCARSNIK 127 Query: 121 VDSASAVIILESYFEQG 137 +++ +A +IL+S+ + Sbjct: 128 INAIAAGVILKSWLNKS 144 >UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIS9_9GAMM Length = 142 Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 61/136 (44%), Positives = 85/136 (62%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ L FD+G IGVA GQ T TA L I+A+DG P+W I++L++EW+P +VG Sbjct: 1 MAELWLGFDWGLGWIGVASGQTETYTASKLKPIRARDGIPNWTDIDQLVQEWRPTGFVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 +P NMDG+E + RARKF R+HGRFG+ + DERL+T EA + + Sbjct: 61 IPYNMDGSESQMVVRARKFRKRLHGRFGLPAEEADERLTTREAWQHMNPASSLKKAKADD 120 Query: 121 VDSASAVIILESYFEQ 136 +DS +A IIL+S+ EQ Sbjct: 121 LDSVAAQIILQSWLEQ 136 >UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betaproteobacteria RepID=C6WUE8_METML Length = 156 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 61/136 (44%), Positives = 86/136 (63%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SGT+LAFDFG + IG+AVG+ + +A PL I + + II +L+ EWQP ++VGL Sbjct: 17 SGTVLAFDFGERRIGIAVGEHLLASANPLMTIDNESNEIRFQIITKLVSEWQPRLLVVGL 76 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL++DG+E +T +KFA R++GRF + V L DER S+ EA L E G K + Sbjct: 77 PLSLDGSEHGVTQLCKKFARRLNGRFNLPVALIDERYSSAEASQLLNEAGIRGRAQKEML 136 Query: 122 DSASAVIILESYFEQG 137 D +A IL+SYF+Q Sbjct: 137 DQVAAQTILQSYFDQA 152 >UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Acinetobacter RepID=RUVX_ACIAD Length = 147 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/132 (43%), Positives = 89/132 (67%), Gaps = 4/132 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGT+ +G+A+GQ ++ PL +DG PDWN + +++KEWQP +VGLPLN Sbjct: 10 IMAFDFGTQKMGIAIGQAAIESSTPLALFPMKDGIPDWNQLLKIVKEWQPTLFLVGLPLN 69 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL--FEQGGYRALNKGKVD 122 MD +E L+ARARKFA R+ + + + DERL+T EAR L +++ G RA K D Sbjct: 70 MDDSESELSARARKFARRLRHQTNITTWMVDERLTTREARDELESYQEQG-RA-KKIAAD 127 Query: 123 SASAVIILESYF 134 S +A ++++S++ Sbjct: 128 SIAASLLIQSWY 139 >UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B46 Length = 148 Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 63/136 (46%), Positives = 85/136 (62%), Gaps = 4/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++AFDFG K IGVA+G IT TA PL I+ + IIE LL EW+P ++VGLPL Sbjct: 15 NVIAFDFGEKKIGVAIGNSITKTAHPLETIRKVKKSERIEIIENLLNEWEPGIVVVGLPL 74 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK--V 121 N DGTE LT A+ FA +I RF V + + DER ++VEA+ L E +++ KG + Sbjct: 75 NEDGTESRLTLLAQNFAKKIKNRFQVPIVMVDERYTSVEAKILLNE--NVKSIKKGNQVI 132 Query: 122 DSASAVIILESYFEQG 137 D +A IIL SYF++ Sbjct: 133 DQVAAQIILGSYFDRS 148 >UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Betaproteobacteria RepID=RUVX_AZOSB Length = 156 Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 62/135 (45%), Positives = 86/135 (63%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GTLLAFDFG IGVAVG+ T A PL + + + II RLL EW+P ++VGLP Sbjct: 16 GTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGLP 75 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG--GYRALNKGK 120 ++DG E L R R+FAN++HGRFG+ V L DERLS+ A L + G G++A K Sbjct: 76 GHLDGREHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQA-RKPV 134 Query: 121 VDSASAVIILESYFE 135 +D+ +A +IL+ + + Sbjct: 135 LDAVAAQLILQHFLD 149 >UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0I3_9PROT Length = 167 Score = 115 bits (287), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 58/134 (43%), Positives = 83/134 (61%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GTLLAFDFGT+ IGVAVG + +A PL I + ++ I +L+ EWQP ++VGLP Sbjct: 14 GTLLAFDFGTQRIGVAVGNTFSSSAEPLTTIAEEKNELRFSAITKLVAEWQPCALVVGLP 73 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DG+ LTA ++FA R+HGR+G+ L DER S++ A L QG K +D Sbjct: 74 CSDDGSPHELTALCQRFAKRLHGRYGLTTLLVDERYSSLAASEQLNRQGVRGRDQKALID 133 Query: 123 SASAVIILESYFEQ 136 +A IL++YF++ Sbjct: 134 QYAAQQILQAYFDE 147 >UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RUVX_THICR Length = 134 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 7/135 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G ++ FDFG K IGVA+GQ IT TA P + ++DG PDW I RL +EW+P I+VG Sbjct: 5 IEGVVIGFDFGLKRIGVAIGQTITRTATPEAIVASKDGKPDWEHISRLFEEWKPSAIVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP+ ++G EQ LT ARKF R+ GR+ V +E+LS++EA + Sbjct: 65 LPMRLNGEEQALTQPARKFGQRLSGRYQRPVYYIEEQLSSIEAEQ-------RKTKTDQP 117 Query: 121 VDSASAVIILESYFE 135 +D +A IILE++ + Sbjct: 118 MDDHAAQIILENWLD 132 >UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bordetella RepID=RUVX_BORA1 Length = 131 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFDFG K IGVA+G +T ARPL I ++ + I+ LL+ W+P ++VGL L Sbjct: 5 TLLAFDFGEKKIGVAIGNTLTCHARPLEIIFSERRDERFGRIQALLEAWRPQRVVVGLAL 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG +QP T R R+FAN++HGRFGV V+L DER S++EA+ L G A + D+ Sbjct: 65 ATDGGDQPATLRCRRFANQLHGRFGVTVELVDERGSSMEAQEKL----GSHAPD----DA 116 Query: 124 ASAVIILESYFEQ 136 +A IIL+ Y ++ Sbjct: 117 MAAAIILQRYLDR 129 >UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GP64_THISH Length = 163 Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/137 (39%), Positives = 84/137 (61%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T L D+G + IGVAVG R +G+ PL A+ +D PDW ++R ++EW+PD ++VG PL Sbjct: 19 TALGLDYGGRRIGVAVGSRESGSGSPLGAVSNRDDGPDWAALDRWVREWRPDVLVVGQPL 78 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY----RALNKG 119 N+DGT PL R ++F ++ R+ + V DER S+ +A L E R + KG Sbjct: 79 NLDGTPHPLAPRIQRFCEQLTERYTLPVARVDERFSSFDAEERLREARASGRRGRKVQKG 138 Query: 120 KVDSASAVIILESYFEQ 136 +D+ SA I+L+++F + Sbjct: 139 DIDALSAAILLDNWFSE 155 >UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Neisseriaceae RepID=C1D4R9_LARHH Length = 155 Score = 112 bits (279), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 60/135 (44%), Positives = 81/135 (60%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+ L FDFG IG+AVG R+ G A PL + A D + I L+ EWQ ++VGLP Sbjct: 5 GSWLGFDFGEARIGIAVGDRLVGIAHPLETLSAPDNDSRFARIAALIGEWQISGLVVGLP 64 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DGT +T AR+FA R+HGRFG+ V L DER S++ A L E G K +D Sbjct: 65 THADGTPHEMTRLARRFAQRLHGRFGLPVVLVDERHSSLLAEDLLRESGRRGRKQKPVLD 124 Query: 123 SASAVIILESYFEQG 137 +A +IL+S+F+QG Sbjct: 125 QVAAQVILQSFFDQG 139 >UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Burkholderiaceae RepID=RUVX_BURP8 Length = 151 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 87/132 (65%), Gaps = 4/132 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFD+G K IGVAVG +T +ARPL ++ ++ + + +L+ EW+PD ++VGLP+ Sbjct: 10 TLLAFDYGEKRIGVAVGNSLTRSARPLVVLQNRNREYRFEAVGKLIDEWKPDALVVGLPM 69 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DGT T A++F N+++GRF + V DER S+VEA +G+ + G R G +D+ Sbjct: 70 HPDGTPHERTQLAKRFGNQLNGRFNLPVTWIDERYSSVEAEAGI--RSGTR--QAGMLDA 125 Query: 124 ASAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 EAACIILQQYLD 137 >UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betaproteobacteria RepID=C6X9Q7_METSD Length = 172 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 64/133 (48%), Positives = 84/133 (63%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT LAFDFG K IGVAVG+ + G A PL I+++ + I L+ EW+P +IVGLP Sbjct: 25 GTALAFDFGEKRIGVAVGEHLLGIAHPLTTIESEANDVRFAAISALINEWRPTVLIVGLP 84 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L++DG E + RKFA R+ GRFG+ V + DERLS+ EA S L E G Y K +D Sbjct: 85 LSLDGEEHATSLLCRKFARRLDGRFGLPVVMIDERLSSAEASSSLNETGVYGRKQKVMLD 144 Query: 123 SASAVIILESYFE 135 +A IL+SYF+ Sbjct: 145 QVAAQHILQSYFD 157 >UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9D9_9GAMM Length = 121 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/120 (43%), Positives = 74/120 (61%) Query: 17 VAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARA 76 +AVG GT +PL ++A+DG PDW + L KEW+PD +++G PLNMDGT RA Sbjct: 1 MAVGNSALGTTQPLAILRARDGQPDWTQVAALCKEWEPDLLLIGDPLNMDGTVSDFAQRA 60 Query: 77 RKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 RKFA R+ GR G+ V++ DERLS+ E + E G ++ VD +A +IL+ + Q Sbjct: 61 RKFARRLEGRLGIAVEMVDERLSSFEVKQQQREAGHSGDYHESPVDDLAAELILKDWLRQ 120 >UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax=Burkholderiales RepID=A6GQ07_9BURK Length = 144 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/133 (42%), Positives = 81/133 (60%), Gaps = 4/133 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 LAFDFG K IGVA G +T TA + ++AQ+ + IE L+KEWQP+ ++VG+P Sbjct: 14 LAFDFGLKRIGVAFGNSLTKTASGIAVVEAQNDEQRFAKIESLVKEWQPEGLVVGVPRQP 73 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL-NKGKVDSA 124 DG + LT R +FA ++ GRF + + DER ++ S + GG A NKG+VD Sbjct: 74 DGADNELTTRCERFARQLEGRFALPCAMVDERYTSAIIESCM---GGKAARENKGRVDMG 130 Query: 125 SAVIILESYFEQG 137 SA +ILE +F +G Sbjct: 131 SACLILEQFFLEG 143 >UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAN4_OXAFO Length = 149 Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 12/136 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LAFDFG K IG A+G ++ TARPL I A+ + I L++EWQP ++IVGLP Sbjct: 22 GVILAFDFGLKRIGTAIGNELSRTARPLEIINAEANDIRFAKIGELIEEWQPVKLIVGLP 81 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DGTE +T R ++FAN++ GRF +E+ + DER S+ +GK D Sbjct: 82 SYPDGTEHEMTRRCKRFANQLRGRFSLEIIMVDERYSS-----------SVLHFQRGKAD 130 Query: 123 SA-SAVIILESYFEQG 137 A +A +IL+ YF++ Sbjct: 131 DAHAAALILQQYFDES 146 >UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RUVX_THIDA Length = 145 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 56/133 (42%), Positives = 76/133 (57%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+LAFD G K GVA G+ G A PL I+A+ IE+L EWQP ++GLP Sbjct: 8 GTVLAFDLGLKRTGVASGELAIGIAHPLTVIQAESTDARMAAIEKLAAEWQPALFVLGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DG+E +T AR FA R+ RF V L DERL++ A S L +G + NK D Sbjct: 68 TRADGSENEMTRVARNFARRLESRFERPVFLIDERLTSATAESELHARGIHGKKNKALTD 127 Query: 123 SASAVIILESYFE 135 + +A +IL+ +F+ Sbjct: 128 AVAAQLILQGFFD 140 >UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Francisella RepID=RUVX_FRAT1 Length = 136 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/137 (37%), Positives = 84/137 (61%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L+A D+G IG++ GQ IT TA P+ ++A DG P+W +++++K W P +II+G Sbjct: 1 MFQSLIAIDYGKARIGISSGQMITKTATPIGTVEAYDGVPNWIELDKIIKCWNPSDIIIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ E +T A+ FA + R+ +V L +E ST EAR L E+ + ++ K Sbjct: 61 LPLDTQNFETDITKSAKDFAKEVQQRYQRKVHLINEAYSTREARWRL-EEVKSKKVSHIK 119 Query: 121 VDSASAVIILESYFEQG 137 VD+ +A +ILE++ + Sbjct: 120 VDALAACVILETWMSEN 136 >UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Methylococcus capsulatus RepID=RUVX_METCA Length = 151 Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 51/133 (38%), Positives = 82/133 (61%), Gaps = 1/133 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 T L FDFG ++IGVAVGQ +TGTA PL ++AQ W I L+ +W P ++VGL Sbjct: 11 ATYLGFDFGERNIGVAVGQSVTGTAAPLRTLRAQPSARLWAAISELIDQWLPAGLVVGLS 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV- 121 DG+E P+TA +F ++ GR+ + V DE L+T E+R+ +++ +++ +V Sbjct: 71 HQQDGSENPITAPTLRFCRQLEGRYRLPVYTVDETLTTAESRTHFYQRRRRKSVEFEQVK 130 Query: 122 DSASAVIILESYF 134 D +A +IL+++F Sbjct: 131 DEMAAQLILQTWF 143 >UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Betaproteobacteria RepID=RUVX_NEIMF Length = 151 Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 56/135 (41%), Positives = 76/135 (56%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT LAFDFG IGVA G G + PL + + I +L++EWQP +VGLP Sbjct: 7 GTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDEKFAAIAKLVQEWQPRYFVVGLP 66 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++ DGT+ +T +RKF R++GRF + V DERLS+V A S L E + K +D Sbjct: 67 VHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERLSSVYAESLLSEAQVFGKKRKSVLD 126 Query: 123 SASAVIILESYFEQG 137 +A IL +FE G Sbjct: 127 QVAAQAILHGFFEGG 141 >UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psychrobacter RepID=RUVX_PSYA2 Length = 177 Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K +G+A+G +T TAR + +G PDW+ + ++K W +++VGLPLN Sbjct: 29 ILALDYGVKKMGMALGNSLTETARAFDILAMNNGQPDWDNLLGIIKVWGVAKVVVGLPLN 88 Query: 65 MDGTEQPLTARARKFANRIHGR-----FGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 MDG+ L+ RA KFA R+ R V V L DERL++V AR +E G + + Sbjct: 89 MDGSSSMLSKRAHKFARRLAHRIMEQHLPVIVSLCDERLTSVAAREIAWENGWIQN-ERD 147 Query: 120 KVDSASAVIILESYF 134 +D SA I++ +YF Sbjct: 148 PIDDISACILMSTYF 162 >UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobacteraceae RepID=A6T292_JANMA Length = 131 Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 10/132 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FDFG K IGVAVG + A+PL I A + I L+++WQP IVGLP Sbjct: 3 TVLGFDFGLKRIGVAVGNTLLKQAQPLTIISAATNDAKFAAIAELVQQWQPALCIVGLPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG E +T R R+FAN++HGRF V L DER S+ + + Q G +D Sbjct: 63 HPDGEEHEMTVRCRRFANQLHGRFNVATVLVDERYSS----AVISHQRG------ELIDD 112 Query: 124 ASAVIILESYFE 135 +A IIL+ YF+ Sbjct: 113 QAAAIILQQYFD 124 >UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Betaproteobacteria RepID=RUVX_NITEC Length = 157 Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 53/138 (38%), Positives = 80/138 (57%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT+LAFDFG + IGVA+G+ A PL I P + I L++ WQP ++VG Sbjct: 17 LSGTVLAFDFGVRRIGVAIGEYELRLAHPLMTIDQAMTKPRFEKIAELIETWQPVLLVVG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 L ++ DG E +T ++FA R+ GRFG+ V + DER +T AR L E G + Sbjct: 77 LSVHADGAEHEITRLCQRFARRLEGRFGIPVVMEDERYTTAIARLTLEEVGITGRKQRPM 136 Query: 121 VDSASAVIILESYFEQGY 138 +D +A IL+++F+ + Sbjct: 137 LDQIAAQHILQTFFDSSH 154 >UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Polynucleobacter necessarius RepID=RUVX_POLNS Length = 147 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 53/133 (39%), Positives = 79/133 (59%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T +AFD+GT+ +GVAVG +T PL I A + + IE+LL EWQP++++VG P Sbjct: 12 TAMAFDYGTRRVGVAVGNSVTKAGEPLKTIAAPNSDTLFKDIEQLLAEWQPNQLVVGHPT 71 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG +TA+A +F N++HGRF + V DER + S + E A + +D+ Sbjct: 72 HPDGAPHEMTAKAIRFGNQLHGRFQLPVAWVDERYT-----SAVLEGD---AQMRDNLDA 123 Query: 124 ASAVIILESYFEQ 136 SA +ILE YF + Sbjct: 124 HSATLILEQYFSE 136 >UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFS9_9PROT Length = 161 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 52/136 (38%), Positives = 80/136 (58%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G++LAFDFG K +GVA+G G A PL I ++ + +I +L+ WQP +VG+P Sbjct: 21 GSILAFDFGKKRVGVAIGNTALGVAHPLITIDSEVTNKRFVMIAQLIDTWQPVLFVVGMP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L+ DG LT +++FA R+ GRF + V + DER ++ A + L E G K +D Sbjct: 81 LHSDGIVHELTQLSQRFARRLAGRFNIPVVMQDERYTSQIASTILREAGVVGREQKSVLD 140 Query: 123 SASAVIILESYFEQGY 138 +A IL+S+F++ Y Sbjct: 141 QIAAQQILQSFFDEQY 156 >UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0G6_HALNC Length = 165 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-DWNIIERLLKEWQPDEIIV 59 + GT LAFD+G IGVAVG+++ G+ARPL + ++ W+ I +LL EW+P +++ Sbjct: 6 LPGTWLAFDYGAWRIGVAVGEQMLGSARPLTTLHHRNAHQIQWDAIGQLLDEWRPVGLVL 65 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G PL G P+ R+F R+ GRF + V+ DERLS+ A+ L + G + K Sbjct: 66 GWPLMDSGETYPVAEFIRRFGRRLDGRFNLPVRYVDERLSSEHAQMLLTTRHGKDKVKKS 125 Query: 120 K--VDSASAVIILESYFEQ 136 +D+ +A IILE++F Q Sbjct: 126 PSMIDAQAAAIILETFFSQ 144 >UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTQ9_9GAMM Length = 141 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 4/138 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 TLL DFG K IG+A GQ +T +A PL + +W+ ++++LK+W+PD I++GLP Sbjct: 2 NTLLGIDFGLKRIGIATGQTLTCSATPLTTLPNHAEHTNWDGLDKVLKDWKPDAIVLGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY----RALNK 118 LN DG++ LT + R+F + + F + DER S+ EA L Q R + K Sbjct: 62 LNKDGSDHALTKQVRQFRDTLGQHFSGPIHWQDERASSREAEQSLTSQRASGDLRRKVKK 121 Query: 119 GKVDSASAVIILESYFEQ 136 +D +A +IL+ + + Sbjct: 122 EDIDQLAAALILQRWLNK 139 >UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUM0_9GAMM Length = 156 Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 6/139 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ DFG +G+A+G +T TA PL K +G P+W+ + ++++ WQ II+GLPL Sbjct: 13 TVMGLDFGIAKMGIALGNTLTQTASPLMQFKMDNGKPNWDELLKIIESWQVSTIIIGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVE-----VKLHDERLSTVEARSGLFEQGGYRALNK 118 NMDG+ L RA+KFA R+ + L DERL++ EA+S +E G ++ +K Sbjct: 73 NMDGSASELGNRAKKFARRLKHHLEEAHRPRPIILADERLTSREAKSLAWEYGLIKS-DK 131 Query: 119 GKVDSASAVIILESYFEQG 137 +DS ++ I+L S+ G Sbjct: 132 EPIDSIASAIMLGSWLRSG 150 >UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomonas intermedia K12 RepID=C7I5C0_THIIN Length = 137 Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 10/133 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FD+G K IG AVG +T +A L +++A ++ I L++EWQP +++VGLPL Sbjct: 14 TVLGFDWGAKRIGTAVGNSLTRSATALRSLRADRNDLKFDAIAALIREWQPQQLVVGLPL 73 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG TA A++FA ++ GRF + V L DER ++V A E G + VDS Sbjct: 74 HPDGAAHDNTAHAQRFARQLEGRFRLPVALVDERYTSVAA-----EDDGAK-----DVDS 123 Query: 124 ASAVIILESYFEQ 136 A+A +I+E Y +Q Sbjct: 124 AAAQLIVEQYLQQ 136 >UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betaproteobacteria RepID=C4KC98_THASP Length = 168 Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 47/99 (47%), Positives = 64/99 (64%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+L FDFG IGVA G+ TG A L + A+ + I RL+ EW+P ++VG+P Sbjct: 28 GTVLGFDFGLARIGVASGELETGLASALTTVHAEANDARFAAIARLIAEWRPVALVVGIP 87 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTV 101 ++DG E LTAR R+FAN++HGR + V DERLS+V Sbjct: 88 THLDGREHELTARCRRFANQLHGRHALPVFTADERLSSV 126 >UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEP3_XANAL Length = 165 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 46/101 (45%), Positives = 60/101 (59%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+L FD G + IGVAVG R AR L I PDW ++RL +W+P ++VG P Sbjct: 21 GTVLGFDVGHRRIGVAVGSRFGSGARALAVIDVHAQGPDWPALDRLHAQWRPHGLVVGDP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA 103 L +DG +QP RA FA + R+ + V L DER S+VEA Sbjct: 81 LTLDGADQPNRKRAHAFARELGARYCLPVVLVDERSSSVEA 121 >UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKC4_9GAMM Length = 130 Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 6/132 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LLAFD+G + IG+AVG+ +TG AR L + D W +I+RL+ EW P+ +VG P Sbjct: 3 LLAFDYGRRRIGIAVGEELTGAARGLRTLNT-DSPELWPVIDRLVSEWAPEGFVVGWPTQ 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG PL R R F + R+ V +DE L++ AR E+ G R + +D+ Sbjct: 62 ADGKPTPLAKRIRAFGAALEARYNQPVYWYDEHLTSHLAR----ERSG-RGRHDPGLDAH 116 Query: 125 SAVIILESYFEQ 136 +A +ILE +F++ Sbjct: 117 AAAVILEGWFQE 128 >UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xanthomonadaceae RepID=RUVX_XYLFM Length = 155 Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +L FD GT+ IGVAVG AR + I DWN ++R+ + W P ++VG P Sbjct: 11 GIVLGFDVGTRRIGVAVGSAWGAGARAVAVIDVHGVAVDWNALDRVKRNWLPVGLVVGDP 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARS---GLFEQGGYRALNKG 119 L ++G +QP+ +A FA ++ R+ + V L DER S+VEA S G G R + Sbjct: 71 LTLEGHDQPIRKQAHAFACQLRERYRLPVVLVDERSSSVEAASRFAGARAAGYKRRRDAD 130 Query: 120 KVDSASAVIILESYF 134 +D+ +A +ILE + Sbjct: 131 TLDAIAAAVILERWL 145 >UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Anaeromyxobacter RepID=RUVX_ANADE Length = 137 Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 50/131 (38%), Positives = 73/131 (55%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G IG+AV I TAR + + + D I + ++++ +VGLPLNM Sbjct: 4 LGVDLGRVRIGLAVADEILRTARAVTTVVRRGEAEDLAAIAEVARDYEVTRAVVGLPLNM 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DGTE P AR FA R+ GV V+L DERLS+ EA S L +G +G+VD+ + Sbjct: 64 DGTEGPSARLARGFAPRLEAALGVPVELFDERLSSFEAESRLRARGVSARDQRGQVDAEA 123 Query: 126 AVIILESYFEQ 136 A +IL+ + ++ Sbjct: 124 AAVILQGWLDR 134 >UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQG5_ACIF5 Length = 143 Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 50/136 (36%), Positives = 74/136 (54%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG LL DFG + IG+AV + + ++ + PDW+ R+LKEWQP +++GL Sbjct: 5 SGPLLGIDFGERRIGIAVLGESGLAPQGVATLRNGECGPDWDGFARILKEWQPRALVLGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+E + R RKFA + RF + + DERLS+ A L E+ + Sbjct: 65 PLHMDGSEGFMVGRVRKFAESLQRRFPLPIHWVDERLSSHAADLVLKERELSHKKRGRLL 124 Query: 122 DSASAVIILESYFEQG 137 D A+A IL ++ G Sbjct: 125 DQAAACEILWTFHNAG 140 >UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Burkholderiales RepID=RUVX_RHOFD Length = 156 Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 15/133 (11%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T LA DFG K G AVG R+ TA+P I A +G + I LKEWQPD ++VG+P Sbjct: 34 TFLALDFGLKRTGFAVGNRLLRTAQPQGTIAA-EGDARFVKIALQLKEWQPDALVVGVPF 92 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG--KV 121 + DG T RAR+FA ++ GRF + V DER +T E AL +G Sbjct: 93 HPDGAAHENTLRARRFARQLQGRFKLPVFEVDERYTTTE------------ALGRGARDA 140 Query: 122 DSASAVIILESYF 134 D+ +A IILE + Sbjct: 141 DAMAACIILEQFL 153 >UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermomicrobia (class) RepID=D1C428_SPHTD Length = 143 Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+A D G + +GVAV + A P+ ++ + D + L++ + P+ II+GLPL Sbjct: 11 LIALDVGARRVGVAVSDELGLIASPVESVDMKRDGMDRLVA--LIERYDPERIIIGLPLG 68 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M G E P A R FA ++ GR + DERL+T A L E G RA K VD+ Sbjct: 69 MSGREGPQAAATRAFAQQLRGRVDRPIIFWDERLTTFMADQSLIEAGHRRARRKQHVDAV 128 Query: 125 SAVIILESYFE 135 +A +IL+SY + Sbjct: 129 AAALILQSYLD 139 >UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ91_ALIAD Length = 144 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/129 (37%), Positives = 71/129 (55%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A DFG + IGVA+ + A+P I+ Q + + L + + I+VG PL+M Sbjct: 1 MAIDFGERRIGVALSDPMGLIAQPYGVIERQSDRQAADEVADLARREEVGRIVVGRPLHM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G +T+RA KFA + R G+ V L+DERL+TV A L EQ R + VD+A+ Sbjct: 61 SGQPSEMTSRAEKFARMLAARTGLPVDLYDERLTTVSAERILIEQNVRRRERRATVDAAA 120 Query: 126 AVIILESYF 134 A ++LE Y Sbjct: 121 AQVLLEDYL 129 >UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myxococcales RepID=RUVX_MYXXD Length = 151 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/130 (36%), Positives = 71/130 (54%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 + D GTK+IGVAV + TA+ + ++ D + + E + +++GLPLNM Sbjct: 4 MGLDLGTKTIGVAVSDGLGLTAQGITTVRRTSLKADLAALATVASEHEVTHVVLGLPLNM 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+E P +RKFA+ + GV V+L DERLSTV A L E RA + +D + Sbjct: 64 DGSEGPRAEASRKFADTLAQSLGVTVELWDERLSTVAATRTLLEADVSRARRREVIDQVA 123 Query: 126 AVIILESYFE 135 A IL+ + + Sbjct: 124 AQFILQGWLD 133 >UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteria RepID=A1AV92_RUTMC Length = 142 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L FD GTK G+A+ +T A + IK ++G+ +W ++ ++ +VGLP N Sbjct: 7 LGFDVGTKRTGIAIANSLTMQATGIKVIKHHKNGSTNWVAFNEVISAHNINKFVVGLPFN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G EQ +T A+ F N++ R+ +EV+ DE LS+ EA+ L + + VD Sbjct: 67 QQGKEQTMTFIAKSFGNKLKNRYQIEVEFIDEYLSSNEAKKLLKYNHHHHNAQRDDVDKQ 126 Query: 125 SAVIILESYFEQ 136 S+ +IL+++ + Sbjct: 127 SSQLILQTWLNE 138 >UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYY4_9GAMM Length = 148 Score = 82.0 bits (201), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 68/132 (51%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L D+G++ IG+A+ + RPL + G PDW +E++L +W P +VGL Sbjct: 10 TGPWLGIDYGSRRIGLAILAHLDIAPRPLGTVANGGGGPDWPALEKVLAQWAPVACVVGL 69 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 DGTE + AR FA + R+G+ + DERLS+V A L E + + + Sbjct: 70 TARADGTESAVARGARHFAAALSQRYGLPILWQDERLSSVTAAVRLREASPRKRRQRLAL 129 Query: 122 DSASAVIILESY 133 D +A IL + Sbjct: 130 DPLAACEILRGF 141 >UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Firmicutes RepID=RUVX_PELTS Length = 154 Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 3/133 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLP 62 ++ D G K IGVA+ + TA+ L I A G P+ ++ I L++++ +I+VGLP Sbjct: 3 IMGLDLGDKKIGVALSDPMGWTAQGLDVI-AVKGPPEASVERISELVRQYGVGKIVVGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NM+G+ P RAR FA + G + V+L DER++T+EA L E RA + +D Sbjct: 62 RNMNGSFGPRAERARAFAGCLAGALNLPVELWDERMTTLEAEKLLIEADLSRARRRQVID 121 Query: 123 SASAVIILESYFE 135 +AV+IL+S+ + Sbjct: 122 KMAAVLILQSFLD 134 >UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostridiales RepID=C5RHH5_CLOCL Length = 135 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 66/132 (50%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G K+IGVAV + TA+ + I ++ D + E+ D I+VGLP N Sbjct: 3 VLGLDVGNKTIGVAVSDPLGFTAQGITTINRKNIKTDIETVVNYCNEYTVDTIVVGLPKN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+GT P + + F ++ + +K+ DERL+TV A + E RA VD Sbjct: 63 MNGTLGPQSEKVMAFVEKLKKNTDINIKMWDERLTTVAAHKAMLEADLSRAKRNKIVDKV 122 Query: 125 SAVIILESYFEQ 136 +A IL+ Y + Sbjct: 123 AATYILQGYLDS 134 >UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Tax=Firmicutes RepID=C2DZL7_9LACO Length = 148 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 77/135 (57%), Gaps = 4/135 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLP 62 LL D G+K++GVA+ + TA+ L I + ++ + I+++++E+ ++GLP Sbjct: 3 LLGLDVGSKTVGVAISDELGLTAQKLETISIDETRHNFGMKAIKKIVREYDVTGFVLGLP 62 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK-- 120 NMDG++ R++ + R+ +F + V DERL+T+EA L E+ K K Sbjct: 63 KNMDGSDGASVNRSKNYGKRLEEKFSLPVAYSDERLTTIEADRVLIEEAEIHDRKKRKEV 122 Query: 121 VDSASAVIILESYFE 135 +D +AV+IL++Y + Sbjct: 123 IDQMAAVLILQNYLD 137 >UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Clostridium RepID=RUVX_CLOCE Length = 142 Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI-IERLLKEWQPDEIIVGLPL 63 +L D+G IGVA+ + TA+ L IK++D + + ++ E+ +I++G P+ Sbjct: 3 ILGIDYGDSRIGVAISDPMGWTAQGLEMIKSKDSLKKAVLRLSEIINEYSVTDIVIGYPI 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT+ P T R +F +I + DERL+TV A + E G + KG VD+ Sbjct: 63 NMNGTKGPRTERTEEFIKKISDLGQFNIIKWDERLTTVSAHRTMNELGIKASKKKGIVDT 122 Query: 124 ASAVIILESYFEQ 136 SAV+IL+ Y ++ Sbjct: 123 MSAVLILQGYLDR 135 >UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomonadaceae RepID=Q0ANY7_MARMM Length = 151 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 68/134 (50%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L+A D G+K+IGVA G + P+ IK T D + LL E Q I++GLP Sbjct: 12 GPLIALDPGSKTIGVAACGASRGLSTPVETIKRTKFTADAERVFALLDERQAVAIVMGLP 71 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +NMDG+E P R A + + + DERLST EA L G R K +D Sbjct: 72 VNMDGSEGPRVQSVRAMARNLMRLRDLPIAFQDERLSTFEAEEKLISAGVRRDKRKDIID 131 Query: 123 SASAVIILESYFEQ 136 + +A IL+S ++ Sbjct: 132 AHAAANILQSALDR 145 >UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL9_9FIRM Length = 147 Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 69/133 (51%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G K IGVA+ A PL I+ ++ I L++++ +I+VGLP N Sbjct: 4 VLGLDVGEKWIGVAISDETFTIATPLETIERTSNKEAYDKIHDLIEKYDVKKIVVGLPKN 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+ T P +KF+ ++ +F +E+ DER++T+ A+ L E R K VD Sbjct: 64 MNNTLGPTCQMVQKFSEKLKNKFRLELVYVDERMTTLMAKDVLMEASVRRENRKKYVDKI 123 Query: 125 SAVIILESYFEQG 137 +A IL++Y + Sbjct: 124 AAAFILKTYMDSS 136 >UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Acidobacteria RepID=RUVX_ACIBL Length = 153 Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 75/134 (55%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA DFGT+ IG+AV + TA+ L + ++ D + ++++ + EI+VGLP Sbjct: 9 GRILALDFGTRRIGLAVSDPLGITAQGLQTLLRKNKRTDLAALRSVIEQNEIREIVVGLP 68 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L + G + T +AR+FA + F + V + DER ++VEA L E VD Sbjct: 69 LRLSGADSSSTEKAREFAAWLEKEFALPVHMWDERFTSVEANRVLRESEMSIKKRGEAVD 128 Query: 123 SASAVIILESYFEQ 136 SAV+IL+++ E+ Sbjct: 129 RLSAVLILQAFLER 142 >UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonuclease, YrrK n=1 Tax=Oribacterium sinus F0268 RepID=C2L1K0_9FIRM Length = 141 Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 74/133 (55%), Gaps = 3/133 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNI--IERLLKEWQPDEIIVGL 61 +LA D+G+K++G+A+ + +PL I + ++G + I+ KE+Q +E+++G Sbjct: 3 ILALDYGSKTVGLAITDPLGIIVQPLKTIWREREGKLRKTVEEIQETCKEYQVEELVLGY 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P +MDG+E R F + + + + L+DERLST+EA L E G + K + Sbjct: 63 PCHMDGSEGERVERVLAFQEMLKKKIELPIHLYDERLSTMEAEEILRENGVPKDRQKEVL 122 Query: 122 DSASAVIILESYF 134 D +A +ILE Y Sbjct: 123 DQVAAQVILEDYL 135 >UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacterium Ellin514 RepID=B9XDA0_9BACT Length = 138 Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 73/131 (55%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D GTK IG+A+ + A+PL + A+ +++L++E Q + ++VG+P N Sbjct: 4 ILAIDHGTKRIGLAISDELGVIAQPLEFVLAEPFANFLVRLKQLIQEKQVEMLLVGMPRN 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P + ++F + + +K DERL++ +A L + R K KVD Sbjct: 64 MDGSYGPAALKVQEFVTVLKDSVAIPIKTWDERLTSAQANRFLIQADVRRDKRKEKVDKT 123 Query: 125 SAVIILESYFE 135 +A I+L+SY + Sbjct: 124 AAAILLQSYLD 134 >UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Firmicutes RepID=RUVX_OENOB Length = 144 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 76/135 (56%), Gaps = 3/135 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLP 62 LL D G+K++GVA + TA + I+ + ++ + + +++ E + I++GLP Sbjct: 3 LLGLDVGSKTVGVAQSDPLGWTASSIEIIRINEAQGEFGLDRLGQIISEKKVSGIVIGLP 62 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNKGKV 121 NM+ TE P +R + + RFG+ + DERL++VEA L E+ RA K + Sbjct: 63 KNMNNTEGPRVEASRNYGKMVSERFGLPIDYQDERLTSVEANRMLIEEADLSRAKRKKVI 122 Query: 122 DSASAVIILESYFEQ 136 DS +A +IL++Y ++ Sbjct: 123 DSLAAQLILQNYLDK 137 >UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI08_9FIRM Length = 143 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 5/133 (3%) Query: 5 LLAFDFGTKSIGVAVGQR---ITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +LA D+G G+A R +T P +KA++ + + KE + + I++GL Sbjct: 3 ILAVDYGDSRTGLATCDRTEFLTTAITPQITLKARNKVA--ARVCEVAKEIEAEMILIGL 60 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMDGTE A++RK A + G+ V++ DER +T A L E G Y + K + Sbjct: 61 PLNMDGTEGERAAKSRKLAKTVELWSGLPVRMWDERQTTCAAADLLDESGTYGSRRKEIL 120 Query: 122 DSASAVIILESYF 134 DS SA +ILE Y Sbjct: 121 DSVSATVILEDYL 133 >UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0A2_METI4 Length = 168 Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/131 (32%), Positives = 70/131 (53%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L+ D+G K IG+AV A PL + A+ ++ ++ ++ +IVGLP N Sbjct: 25 ILSLDYGNKHIGLAVNDESFSIAIPLDPLPAEPYVKFIGKLKEIIVNYEVSLLIVGLPRN 84 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P + R+F ++ + V+ HDERL+T A L + G K K+DS Sbjct: 85 MDGSYGPAAEKVRQFVLKLKQWIPIPVEFHDERLTTKLADRLLTQCGCNGREKKKKIDSY 144 Query: 125 SAVIILESYFE 135 +A +IL+SY + Sbjct: 145 AAAVILQSYLD 155 >UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G871_9FIRM Length = 147 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 3/138 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAI---KAQDGTPDWNIIERLLKEWQPDEI 57 ++ ++A D+G K++GVA + TA+ + + + I+++ ++ + I Sbjct: 6 LADHIMALDYGAKTVGVACTDSLGLTAQAVETVWRKRENKLRKTLARIDQIARDREIRLI 65 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +VGLP+NMD +E AR FA+++ R G+ V+++DERLST+EA L + G Sbjct: 66 LVGLPVNMDDSEGERAGMARDFADQVAQRTGIAVEMYDERLSTIEADEILGKSGVPVGKR 125 Query: 118 KGKVDSASAVIILESYFE 135 K +D SA +ILE Y E Sbjct: 126 KRHLDELSAQLILERYLE 143 >UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6Z7_9GAMM Length = 134 Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 8/130 (6%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G + GVAVGQ +T TA+PL ++ + ++EW I++GLP Sbjct: 6 ILALDVGQRKTGVAVGQSLTQTAKPLAVLRHPAQQLEAAHFAAWVREWSVSHIVIGLPKL 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG E PL A R+ + FG+ V DE LS+ EAR+ R + +VD+ Sbjct: 66 RDGKEHPLAAPIRRIGAKCQEAFGLPVHYIDEYLSSHEARA--------RLPGEKEVDAM 117 Query: 125 SAVIILESYF 134 +A II E + Sbjct: 118 AAAIIAEDWL 127 >UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9N1_ACIC5 Length = 146 Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 44/129 (34%), Positives = 69/129 (53%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G + +GVAV + TA+P+ + + D + RLL+ + E++VG PL M Sbjct: 1 MALDVGDRRVGVAVSDELGLTAQPVLTLVRTNRKQDMKSLGRLLRRFGCTEVVVGNPLYM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G P +A+ FA + FG+ V L DERL+T EA L G + ++ VD + Sbjct: 61 SGDISPQALKAQAFAAWVREEFGLPVHLWDERLTTTEAHRHLHAAGRPGSEHREVVDQVA 120 Query: 126 AVIILESYF 134 AV+IL+ + Sbjct: 121 AVLILDGFL 129 >UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verrucomicrobia RepID=B4D9U2_9BACT Length = 140 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 65/130 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G IGVAV + A PL I ++ I L+ II+GLP NM Sbjct: 5 LGIDHGDARIGVAVSDDLGMLAHPLETIHVKEVADPVARIATLVTSKDVGHIILGLPRNM 64 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ P + R FA ++ G EVKL DERL++V A+ L E G ++ +D + Sbjct: 65 DGSYGPAAEKVRAFAEKLRAACGCEVKLWDERLTSVAAQRSLHEAGRKVKDSREVIDQVA 124 Query: 126 AVIILESYFE 135 A +IL+ + + Sbjct: 125 AQLILQGWLD 134 >UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVX_SYNAS Length = 150 Score = 75.1 bits (183), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 69/131 (52%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D+G K IGVA+ + TA+ L + + D II L++ + ++I++G PL Sbjct: 3 ILGLDYGEKRIGVALCDELGLTAQALTTVIRKSWRNDVGIIASLVRTYDVEKIVIGYPLR 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +DGTE + +FA R+ G+ V DE L+T EA L G +G VD Sbjct: 63 LDGTEGIQCEKVVRFARRLEAALGIPVIRWDETLTTKEAEEILSRSGVPPRKRRGVVDRL 122 Query: 125 SAVIILESYFE 135 +A +IL+SY + Sbjct: 123 AASLILQSYLD 133 >UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RUVX_UNCTG Length = 140 Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 67/132 (50%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ D+G K IG+A+ + TA P +K + I + K I++GLPLN Sbjct: 4 IMGIDYGLKRIGIAITDFLRITASPFDTVKNVSLKKNALKILEIAKNRDVSIIVLGLPLN 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNKGKVDS 123 M+GTE + RKF +I +EV DERL+TV+A L E+ R KG D Sbjct: 64 MNGTEGGMAETVRKFIEKIKFLSDIEVTTVDERLTTVQAERMLIEEADISREKRKGIKDK 123 Query: 124 ASAVIILESYFE 135 A +IL++Y + Sbjct: 124 VVAALILQTYLD 135 >UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opitutaceae RepID=RUVX_OPITP Length = 145 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 2/135 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L D+GT+ IG+A G + G A PLPA+ D W + ++ + +++VG PLN Sbjct: 3 CLGIDYGTRRIGLAYGDEL-GVATPLPALVEADPAKRWQSLLATARQRRVTDLVVGHPLN 61 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 MD T P A A R+ GV+V L DERL++ EA + + + G +DS Sbjct: 62 MDDTAGPKAKEAEAVAARLRTELAGVDVHLVDERLTSYEAEATISKTQRRAVRASGVIDS 121 Query: 124 ASAVIILESYFEQGY 138 +A +IL+ + +Q + Sbjct: 122 RAATLILQDFLDQRF 136 >UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=RUVX_SYNWW Length = 141 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 70/133 (52%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ D G K IG+A + TA+ ++ + D + ++ L +E+Q ++I++GLPLN Sbjct: 3 IMGLDLGEKRIGIAFSDPMGWTAQGHSILQRKGLKKDLSYLQELCQEFQVEKIVLGLPLN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+GT P ++FA + + V DERLS+ A L E R K +D Sbjct: 63 MNGTMGPKALETQEFARALQEALKIPVDFWDERLSSKSAERVLLEADLSRKRRKELIDKI 122 Query: 125 SAVIILESYFEQG 137 +AV IL++Y + G Sbjct: 123 AAVHILQAYLDGG 135 >UniRef50_C5JAL6 Resolvase family protein, holliday junction-type, YqgF-like n=1 Tax=uncultured bacterium RepID=C5JAL6_9BACT Length = 161 Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LLA D+G + +GVAV + + PL I ++ + + L+ + I+VG P+N Sbjct: 14 LLAIDYGDRFLGVAVSDIMWHISTPLFPIDSKSCNA-FQALGALIDQHACGGIVVGYPIN 72 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 M+G+E P R R+F +I F + + L DERLSTV A + E R K KVDS Sbjct: 73 MNGSEGPACERVREFCQKIKKFFPSIPIGLFDERLSTVAAERNMVEADMSRKKRKQKVDS 132 Query: 124 ASAVIILE 131 +A +L+ Sbjct: 133 LAASYVLQ 140 >UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BUR1_9PROT Length = 161 Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G++LAFD G K GVAVG + T+R L +++ I++L+ EWQP +++GLP Sbjct: 17 GSVLAFDLGIKKTGVAVGNNVLKTSRNLVTFYSKNKNQRIEKIKQLVNEWQPIYLVLGLP 76 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK-GKV 121 N D + T A I + + +E S+ A + + G + N V Sbjct: 77 SNRDSSANETTKFCLNTAKEIEKNINLPIFFVNENYSSTSAEELIKDLGNKKQKNNISLV 136 Query: 122 DSASAVIILESYFEQ 136 D +A IIL+S+F + Sbjct: 137 DQIAADIILQSHFNE 151 >UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chloroflexaceae RepID=RUVX_CHLAA Length = 153 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 64/131 (48%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G + IGVA+ A PL I A I RL++E ++VGLPL Sbjct: 6 ILALDVGERRIGVAISDADARIAAPLTTINAHPPERAIAQIVRLVQERGVSRVVVGLPLT 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M G P ++FA+ + V++ DERL++V A L G A K ++D Sbjct: 66 MRGERGPQAEVVQRFADTLSSALSCPVEMFDERLTSVAAEQMLRNLGLKPAKIKAQIDQV 125 Query: 125 SAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 AASIILQDYLD 136 >UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A3K135_9RHOB Length = 156 Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 63/132 (47%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D GTK+IGVAV + A PL +K + D ++ L+ + +I+GLP N Sbjct: 19 LMGLDLGTKTIGVAVSDGLRSVATPLETVKRKKFGVDAERLQALIAGRRIGGLILGLPRN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE P R FA + + DERLSTV A L E R +D Sbjct: 79 MDGTEGPRCQSTRAFARNFAALWDGPIGYWDERLSTVAAEKALLEADTTRKRRAEVIDHV 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASYILQGALDR 150 >UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVX_NATTJ Length = 141 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 68/131 (51%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ FD G +IGVAV + TA+ IK Q D + +L++++Q ++IVGLP N Sbjct: 3 IMGFDLGEATIGVAVSDALQLTAQGKTVIKRQSLEKDIEQVTKLIEDYQVSKLIVGLPKN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+G+ + + F + + ++ DERL++ A L E R K +D Sbjct: 63 MNGSLGQMADQIMDFIKSLEQEVDIPIETVDERLTSRMAEQTLLEADVSRKKRKQVIDKL 122 Query: 125 SAVIILESYFE 135 +AV IL++Y + Sbjct: 123 AAVNILQTYLD 133 >UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG11_9ACTN Length = 171 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G IG+A+ A PL + A + L+++W PD ++ GLP + Sbjct: 22 MALDIGDARIGIAISDPAGRVASPLKVLPAAEVLGHAASFRMLVEDWMPDALVCGLPFTL 81 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY--RALNKGKVDS 123 G + P A ++ A RI + + DERLS+ EA+ L E GGY RA+ +GKVD Sbjct: 82 AGEQGPQAASLKERAQRIAKACDLPLYFSDERLSSSEAKRFLRE-GGYDERAM-RGKVDM 139 Query: 124 ASAVIILESYFE 135 +A I L+S+ + Sbjct: 140 IAASIFLQSWLD 151 >UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E3C Length = 169 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+GTK IGVAV A P+ +A D T + L + ++VGLP Sbjct: 15 GALLGVDYGTKRIGVAVCDPDRVIASPV-GTQANDATRE-PYFRDLCARSKFAGVVVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L+ G E P++ AR FA + G+ V + DER ++ A S L G R K KVD Sbjct: 73 LHASGEESPMSGEARAFARWLSDLTGLPVVMWDERHTSFAAESALLGAGLTRKKRKEKVD 132 Query: 123 SASAVIILESYFEQG 137 +A +IL+++ + G Sbjct: 133 RVAAQMILQTFIDAG 147 >UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sphingomonadales RepID=RUVX_NOVAD Length = 155 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ D GTK+IGVA+ R A I+ D I ++ E I++GLP Sbjct: 17 GSLIGLDTGTKTIGVALCDREWRFATAGTTIRRTKFAADKAQIRAIVAERGVKGIVIGLP 76 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LNMDG+E P + AR A + G+ + L DER +T A + EQ RA ++D Sbjct: 77 LNMDGSESPRSQGARAMARNLED-LGLPILLWDERWTTQAAERAMIEQDFSRAKRAERID 135 Query: 123 SASAVIILESYFE 135 S +A +IL+ + Sbjct: 136 SHAAALILQGAID 148 >UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP83_9CLOT Length = 139 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 2/132 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G GVAV R A PL I+ + I +L E + ++I +GLP N Sbjct: 3 ILGIDLGKARTGVAVCDRAEMLASPLCVIQEHNRERLIEKIVKLSNERRAEQIALGLPKN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALN-KGKVDS 123 MDG+E AR+F + + G+ V DER +TV A G Q R K VDS Sbjct: 63 MDGSEGESAQNAREFGALLQEKTGLPVAFVDERGTTVTAH-GYLNQTDVRGKKRKAVVDS 121 Query: 124 ASAVIILESYFE 135 +AVIIL++Y + Sbjct: 122 VAAVIILQNYLD 133 >UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=Lactobacillaceae RepID=RUVX_LACS1 Length = 147 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 3/136 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVG 60 G L+ D G++++GVAV + TA+ + ++ + ++ + I L+KE + ++G Sbjct: 2 GRLMGLDVGSRTVGVAVSDMLGWTAQGVEIVQINEDEQEFGLDRIAELVKENEVVGFVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG-GYRALNKG 119 LP NM+ T P A+ + + +F + + DERL+TVEA L EQ R K Sbjct: 62 LPKNMNNTSGPRVEAAKAYGELLEEKFNLPIDFIDERLTTVEAERMLVEQADASRKKRKK 121 Query: 120 KVDSASAVIILESYFE 135 +D +A +IL++Y + Sbjct: 122 VIDKLAASLILQNYLD 137 >UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6A4_MYCCR Length = 141 Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 2/135 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLP 62 +LA D GTK+ G A+ + A+ L ++G + + I L K+++ +I++G P Sbjct: 7 ILALDLGTKTCGFAITDPLAIIAQSLENFTYKNGDLNQIVLKIRDLQKQYEIGKIVLGYP 66 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L M+G + P T K ++ + F + V L DERLST +A L R K +D Sbjct: 67 LYMNGNKAPHTLLVEKMSSILKQNFQIPVVLQDERLSTSQAHDILILANVSRKKRKKVID 126 Query: 123 SASAVIILESYFEQG 137 +A IILE Y + Sbjct: 127 KLAAQIILERYLSEN 141 >UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=Bacteria RepID=RUVX_CLOPH Length = 150 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/136 (33%), Positives = 74/136 (54%), Gaps = 7/136 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI---IERLLKEWQPDEIIVGL 61 ++ D+G+ ++GVA+ + TA+ + I+ + T IE L+KE++ +EI++G Sbjct: 3 IMGLDYGSVTVGVAISDSLKLTAQGIEVIRRKSETKLRQTLARIEELIKEYEVEEIVLGY 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK- 120 P NM+ T ++ +FA + R G+ V L DERL+TV A L G +L K Sbjct: 63 PKNMNNTIGERAEKSEEFAEHLRRRTGLPVVLWDERLTTVAAHQVL--NAGEVSLKKKME 120 Query: 121 -VDSASAVIILESYFE 135 VD +AV IL+ Y + Sbjct: 121 VVDKLAAVFILQGYLD 136 >UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0R0_9BACE Length = 139 Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 44/130 (33%), Positives = 65/130 (50%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D+G G+A+ A I ++ I RL+KE +E+++G P N Sbjct: 3 IMAIDYGDARTGIAISDPTGLLAGYTTVIHSRKSEVVAEEIARLVKEHGVEELVMGFPRN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE P R FA ++ G+ L DER +TVEA + L G +K VD+ Sbjct: 63 MDGTEGPRAELYRAFAQQVGQVTGLTPVLWDERRTTVEAHNILHASGKRMKQHKKTVDAV 122 Query: 125 SAVIILESYF 134 +A +ILE Y Sbjct: 123 AATLILEGYL 132 >UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Alphaproteobacteria RepID=RUVX_AGRRK Length = 164 Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 62/129 (48%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDG 67 D GTK+IG+A+ A P P IK T D + ++ + ++GLP+NMDG Sbjct: 22 LDLGTKTIGLAMSDLGRRFATPRPVIKRVKFTQDAQTLLAFAEKEKVAAFVIGLPMNMDG 81 Query: 68 TEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAV 127 + P R F + + + DERLSTV A L E RA ++DSA+A Sbjct: 82 STGPRVQATRAFVRSMADKTALPFVYWDERLSTVAAERALLEMDVSRAKRAERIDSAAAS 141 Query: 128 IILESYFEQ 136 IL+ ++ Sbjct: 142 FILQGALDR 150 >UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV16_ORYSJ Length = 237 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 5/136 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G GVAVG+ IT RPL +K + + +++ + ++ + DE+IVGL Sbjct: 73 CGFSLGVDLGEARTGVAVGRGIT-LPRPLTVLKLRGQKLELMLLD-IAQQQEADELIVGL 130 Query: 62 PLNMDGTEQPLTARARKFANRI---HGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 P++ DG+E P + + R R+ G+ V L DE +T++A + +G R+ Sbjct: 131 PVSADGSETPQSNKVRSVVGRLAVQAADRGLRVYLQDEYGTTIDALEFMISRGVKRSARD 190 Query: 119 GKVDSASAVIILESYF 134 K D+ SA++ILE YF Sbjct: 191 VKSDAYSAMMILERYF 206 >UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Actinomycetales RepID=RUVX_LEIXX Length = 155 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 48/134 (35%), Positives = 61/134 (45%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG L D GT IGV+ A P + D I ++ + EIIVGL Sbjct: 3 SGVRLGIDVGTVRIGVSCSDLHGTLATPYETVARSGDAADRRRIAEIVTDLGVVEIIVGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G TA A FA + G V+L DERLSTV A S L G ++ V Sbjct: 63 PLALSGVHTASTADAVAFAEALVVEVGAPVRLVDERLSTVSAHSALRSSGKNAKSSRPVV 122 Query: 122 DSASAVIILESYFE 135 D A+A IIL+ + Sbjct: 123 DQAAATIILQHALD 136 >UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=RUVX_DICTD Length = 141 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 69/131 (52%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K IG+A+ + A+ L + +D N +++L+KE+ EI++G P++ Sbjct: 3 VLAIDWGEKYIGLAISDPLRIIAQGLDVWEIKDEEDFVNRLKKLIKEYNVSEIVLGYPIS 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 + G E T + A RI + +K DER +T+EA L E R K + Sbjct: 63 LRGHENEKTKKIEYVAERIKTVVNLPIKFVDERFTTMEAERVLLEGDIKRRDRKLLKNKQ 122 Query: 125 SAVIILESYFE 135 +AVIIL+ Y + Sbjct: 123 AAVIILQKYLD 133 >UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C393_9PLAN Length = 162 Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 64/133 (48%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+GTK +G+A+ A PL Q D + ++ E++ ++VGLP Sbjct: 19 GRLLGLDYGTKRVGIAISTFEQNIASPLDNYNRQSLPQDQKHLLSIITEYRCKGLVVGLP 78 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E AR+F N + + V+ DER S+ A L R K +D Sbjct: 79 VHMSGDEGQKAKEARQFGNWVSQFAEIPVRYWDERYSSATAEEILVNLNMSRNKRKAYLD 138 Query: 123 SASAVIILESYFE 135 +A IIL+S+ + Sbjct: 139 KLAAQIILQSFLD 151 >UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zymomonas mobilis RepID=RUVX_ZYMMO Length = 163 Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 1/129 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D GTK+IG+A+ A P I+ + T D ++ + +++ Q +++GLP Sbjct: 27 GRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVKGLVIGLP 86 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LN+DG++ P T R FA + + V + DER ST L E RA VD Sbjct: 87 LNLDGSDSPRTQSVRAFAKNV-APLSLPVLMWDERWSTKAVTRTLLEADASRARRSEVVD 145 Query: 123 SASAVIILE 131 +A IL+ Sbjct: 146 KMAAAYILQ 154 >UniRef50_UPI000050F766 Holliday junction resolvase-like protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F766 Length = 150 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 66/130 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 + D G+ IGVA A PL ++ D + ++ E++P E+++G P ++ Sbjct: 1 MGLDIGSVRIGVAASDPDGILATPLTVVRRTDEPAALKTLREIIDEYEPIELLIGDPKSL 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + A A +FA RI ++L DER +TVEA L G + VD+ + Sbjct: 61 DGSARAAAATALEFAKRISAATATPIRLVDERFTTVEAHHALAAAGKNSRQRREIVDAQA 120 Query: 126 AVIILESYFE 135 AVIIL++ E Sbjct: 121 AVIILQNALE 130 >UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C812_9FIRM Length = 144 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/137 (35%), Positives = 71/137 (51%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIK-AQDGTPDWNIIERLLKEWQPDEIIV 59 M +LA D+G IGVAV + TA+ + IK ++ D I++ +KE+ +I+ Sbjct: 1 MKKRILALDYGDSRIGVAVSDALHITAQGICVIKRTKNIEEDIEKIKKYIKEYDTGLVIL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G PLN+ G +F + + + + V+L DERLST EA L E GG K Sbjct: 61 GHPLNLSGERGTRALVTEEFCDILKEKIDIPVELWDERLSTKEAERAL-EAGGVNWRKKR 119 Query: 120 KV-DSASAVIILESYFE 135 +V D +A IIL SY + Sbjct: 120 EVIDMMAAQIILSSYLD 136 >UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIA0_KOCRD Length = 165 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 10/144 (6%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP----DWNIIERLLKEWQPDEII 58 G + D GT +G+A+ A P + +D P D II +L ++ + Sbjct: 8 GVRMGVDVGTVRVGIALTDPDCVLATPHQTL-TRDPNPRKAFDVKIITKLCEQRDVRTVY 66 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFG-----VEVKLHDERLSTVEARSGLFEQGGY 113 VGLP +++G E T AR +A + R G EV+L DERLSTV A L + G Sbjct: 67 VGLPRSLNGHENDSTRMARDYAAGLLRRLGSRGCTTEVRLVDERLSTVTAHRSLLDSGVS 126 Query: 114 RALNKGKVDSASAVIILESYFEQG 137 R + +VD A+AV L++ +QG Sbjct: 127 RREHMDRVDQAAAVTFLQTAVDQG 150 >UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Propionibacterium acnes RepID=RUVX_PROAC Length = 160 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G LA D+G IGVA R A P+ + D P + E ++ E++P E+I+G Sbjct: 11 LCGVRLAIDWGKARIGVAASDRDAILAFPVETVHTAD-RPVQRLAE-IVAEYEPVEVIMG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP+ ++GTEQ R ++ + V+ DER++T A L E G +G Sbjct: 69 LPVALNGTEQLAAQDVRDAGRQLTEAINPIPVRWVDERMTTRTAARALHEAGRNARKQRG 128 Query: 120 KVDSASAVIILESYFEQ 136 +D A+AV ILE EQ Sbjct: 129 VIDQAAAVAILEHVLEQ 145 >UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK4_THET1 Length = 149 Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A+ A I D I R+ + ++I+VGLPL Sbjct: 2 VVMGIDPGRKRIGIALSDPTGLLATAYKVIHRTTSDRDLEEIRRIAEHENVEKIVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE---QGGYRALNKGK 120 +M G E RAR+ A +I G+ V+L DERL++VEA L E + G K Sbjct: 62 HMSGYEGEEAVRARELAKQIETATGLPVELVDERLTSVEAERRLLESRRKLGKLGRKKLA 121 Query: 121 VDSASAVIILESYFEQ 136 +D+ +A ++L+ Y +Q Sbjct: 122 IDAEAAAVLLQDYLDQ 137 >UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alphaproteobacteria RepID=RUVX_JANSC Length = 160 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 3/135 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D GTK+IGVA+ R+ +A L +K + D + + L+ + + II+GLP N Sbjct: 19 LIGLDLGTKTIGVALSDRLLTSASALETVKRKKFGVDADALAGLIAKHEVGGIILGLPRN 78 Query: 65 MDGTEQPLTARARKFANRI--HGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 MDG+E P R FA + G F + + DERLSTV A L R + Sbjct: 79 MDGSEGPRAQATRAFALNLSRRGDFAHLALGFWDERLSTVAAERALIAADTSRKRRSEVI 138 Query: 122 DSASAVIILESYFEQ 136 D+ +A IL+ ++ Sbjct: 139 DAVAASYILQGALDR 153 >UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2N7_9FIRM Length = 143 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 1/132 (0%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 ++ D G +IG+AV + TA+ + ++ + D + +L++E++ D ++ GLP +M Sbjct: 5 MSLDLGDATIGIAVSDLLGLTAQGVETVRRTNIEADLAHLGQLMQEYEVDALVAGLPKHM 64 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E + R F + F G EV DERLSTV A L R + +D Sbjct: 65 NGDEGERCSIVRAFMAEVEEHFPGTEVHYWDERLSTVAASRALIAGDVSRKKRRKVIDKM 124 Query: 125 SAVIILESYFEQ 136 +AV IL+ + ++ Sbjct: 125 AAVYILQGFLDR 136 >UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCA5 Length = 147 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 71/141 (50%), Gaps = 10/141 (7%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERL---LKEW----QPDEII 58 L D G K+ G A+ A L ++ + +I R+ L+E Q DEII Sbjct: 4 LCLDLGKKTCGFAISDVNQTIAIGLENFFYEE-YHFYEVINRIKYYLEESEFQGQVDEII 62 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 +GLPL MD +E T +KFA + + ++L DER ST A + + QGGY A K Sbjct: 63 LGLPLRMDLSESKTTKMVKKFATVLAKNITLPIRLQDERQSTKNAEA-ILSQGGYNAKQK 121 Query: 119 G-KVDSASAVIILESYFEQGY 138 K DS +A +ILE Y E+ + Sbjct: 122 KLKKDSLAAQLILEDYLERQH 142 >UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Coriobacteriaceae RepID=C8W9V1_ATOPD Length = 140 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 66/131 (50%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G IGVAV A P+ + AQ+ + +L++W+P+ ++ G P Sbjct: 3 VLALDIGEVRIGVAVSDPDGAIASPVCVLPAQEVLSHARTFKTVLEDWEPELLLCGRPKT 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 + G + P + A +I + ++ DERLS+ EA+ L QG +GKVD Sbjct: 63 LAGEDGPQAQKITVQAEQIAKNCQLPLEFTDERLSSAEAKKILRAQGLSEKAMRGKVDMV 122 Query: 125 SAVIILESYFE 135 +A + L+S+ + Sbjct: 123 AASLFLQSWLD 133 >UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=RUVX_DICT6 Length = 139 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 2/132 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW-NIIERLLKEWQPDEIIVGLPL 63 +LA D+G K +G+A+ + A+ L + + G D+ + ++RL++++Q EI++G P+ Sbjct: 3 VLAIDWGEKYVGLAISDPLRIIAQGLDVWEIK-GEEDFVSRLKRLVEDYQVKEIVLGYPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ G E T + R A I G+ VK DERL+T+EA L E R K + Sbjct: 62 SLRGHENERTQKVRHIAELIESVIGIPVKFVDERLTTMEAEKVLLEGDIKRKKRKLLKNK 121 Query: 124 ASAVIILESYFE 135 +AVIIL+ Y + Sbjct: 122 QAAVIILQKYLD 133 >UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Dehalococcoides RepID=RUVX_DEHSC Length = 133 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 4/128 (3%) Query: 10 FGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTE 69 G K IG A+ + A PL ++ D T IE L+K QPD +I+GLP++++GT Sbjct: 1 MGDKWIGAALSDPLRILASPLVILRRDDDTKTLENIESLVKTHQPDLLIIGLPISLNGTI 60 Query: 70 QPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG-KVDSASAVI 128 P + + F+ + +E+ DER ST EAR + + G NK + D+A+A + Sbjct: 61 GPQAEKVKSFSELLSRHLNIEIIYRDERFSTDEARRKMNDSGKN---NKTVRDDAAAAAV 117 Query: 129 ILESYFEQ 136 IL+ Y ++ Sbjct: 118 ILQDYLDE 125 >UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWK5_9ACTO Length = 152 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 7/139 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLL---KEWQPDEI 57 ++G LA D G IGVA + ++GT+ LP +K PD + ++ LL + P + Sbjct: 2 VAGNFLAIDVGKARIGVA--RSVSGTSLALP-VKTLQVQPDGSELDELLAIITDSNPAAV 58 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 VGLP M G E AR +A R+ R G + V L DERLS+ +A + L + G Sbjct: 59 FVGLPKLMSGKEGEAARMARSYARRLVRRLGELPVHLIDERLSSADAHAKLQQAGVCARR 118 Query: 117 NKGKVDSASAVIILESYFE 135 K VD +AV IL E Sbjct: 119 QKEMVDQLAAVTILTRALE 137 >UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Orientia tsutsugamushi RepID=RUVX_ORITB Length = 157 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 67/128 (52%), Gaps = 3/128 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K +GVA+ A PL I A + N I+ + + I++GLP Sbjct: 19 ILGIDFGEKKVGVAISNIEHTVAMPLQTILATN-QDRVNKIQEIAVAYNIGAIVIGLPFK 77 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS- 123 +DGTE T R + FAN++ + + + L DERL++ +A + L + G + + +D Sbjct: 78 LDGTETSQTHRVKDFANKLANKLLLPIFLCDERLTS-KAANNLLKIGNIKRKVRNAIDDR 136 Query: 124 ASAVIILE 131 +A IILE Sbjct: 137 VAASIILE 144 >UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=RUVX_HYPNA Length = 151 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 63/134 (47%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D GT +IGVA RI A P+ I + P + + E +IVGLP Sbjct: 13 GVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSLERLLHIYDERAAVGLIVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LN+DG+ P R + + + V DER S+ EA + G R + ++D Sbjct: 73 LNVDGSMGPRAQSVRTLVSSLLKVRDLPVTFQDERYSSAEAGDIMRAAGATRRNREARID 132 Query: 123 SASAVIILESYFEQ 136 +++A +IL+ + Sbjct: 133 ASAAAVILQDALSR 146 >UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rhodopirellula baltica RepID=RUVX_RHOBA Length = 173 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 66/134 (49%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L + D+GT IGVA+ A PL D L K + +VGL Sbjct: 15 TGRLASVDYGTVRIGVAICDPDWILASPLEVHPVSTPEKDAQYFIDLAKSERIAAWVVGL 74 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++ DG E + +RKFA + G+ +L DER +TV A + + + R K +V Sbjct: 75 PIHCDGGESDKSKESRKFAAWLKETTGLPTRLFDERFTTVAANAKIRQGKTTRKKTKQRV 134 Query: 122 DSASAVIILESYFE 135 D+ +A ++LES+ E Sbjct: 135 DAVAAQVLLESFLE 148 >UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX03_9PROT Length = 168 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 3/131 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD-GTPDWNIIERLLKEWQPDEIIVGLPL 63 L+A D G K IGVAV R + R + + +D G P + ++++E+ ++ GLP Sbjct: 29 LIALDIGMKRIGVAVCDRFGISCRGVTCLMRRDHGWP--QQLAKVVREYGAKSVVAGLPK 86 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE A AR + + V DERLST A+ L+ QG + K+D Sbjct: 87 NMDGTEGVQAADARAAVAELKKTLPLPVTFQDERLSTWTAKERLYAQGLREKKVQEKLDQ 146 Query: 124 ASAVIILESYF 134 +A +ILE + Sbjct: 147 TAAAVILEDFL 157 >UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXP5_DICNV Length = 129 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 8/135 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L D GT GVA+GQ +TG A+PL + L+++W+ + I++G Sbjct: 1 MVQWVLGIDVGTYHTGVAIGQSVTGLAKPLQRFNLPLKQVHADTFSALVQQWKVNCIVIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP DG + PL+ + A+ +GV V DE L++ A+ + ++K Sbjct: 61 LPSLADGKKHPLSDEIHRLADECIKLYGVPVHFIDETLTSHAAQMRF-----PKTIDK-- 113 Query: 121 VDSASAVIILESYFE 135 DSA+A +I+E + Sbjct: 114 -DSAAAAVIVEDFLS 127 >UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI5_9FIRM Length = 156 Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 34/78 (43%), Positives = 47/78 (60%) Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 I+ GLP NMDGTE A++R+FA R+ G V L DER +TV A + L + + Sbjct: 56 IVCGLPKNMDGTEGSRAAKSRRFAQRLANTAGRPVVLWDERRTTVSATAILADNDTFGQK 115 Query: 117 NKGKVDSASAVIILESYF 134 K ++DS SA +ILES+ Sbjct: 116 RKARLDSVSAAVILESFL 133 >UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chlorobiaceae RepID=RUVX_CHLPB Length = 144 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 45/135 (33%), Positives = 68/135 (50%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K G+A A+P+ + II+ L+E ++IIVG PLN Sbjct: 9 ILAIDYGKKRTGLAKTDPFCSFAQPVGTFPPEK---IITIIKSFLQENSVEKIIVGYPLN 65 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA--LNKGKV 121 DGT+ P+T F + F + V+ DE S+ +A L E G R KG++ Sbjct: 66 SDGTKNPMTGIIDGFIEELSAAFPDIPVEPIDEHGSSKQAGKVLIESGLSRKKRQRKGRL 125 Query: 122 DSASAVIILESYFEQ 136 DSA+A ++L+ Y E Sbjct: 126 DSAAACLLLQHYLEN 140 >UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9BACT Length = 140 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 65/132 (49%), Gaps = 3/132 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ D GT IGVAV + A+ + KA DG P + +ER + + ++VGLP+ Sbjct: 4 IICLDVGTVRIGVAVSDPLGMFAQGIAVWKA-DG-PWLDELERAFERYDTGCLLVGLPIR 61 Query: 65 MDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DGT P + I RF V V+ DER ST A S L E R K VD Sbjct: 62 EDGTIGPSAQHVQDVVKEIQRRFPMVTVRYWDERYSTCTATSYLLEGNVSRRKRKQSVDK 121 Query: 124 ASAVIILESYFE 135 +A +IL+SY + Sbjct: 122 IAAAVILQSYMD 133 >UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alphaproteobacteria RepID=RUVX_RHOCS Length = 188 Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L+ D G K+IG+AV A P+ I+ T D + R +++ ++VGL Sbjct: 16 NGRLMGLDLGEKTIGLAVSDPGLSVASPVGTIRRTKFTQDAQELARAMRDRDVRALVVGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGR-----FGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P+NMDGTE P R+F+ + R F E+ DERLST + R Sbjct: 76 PVNMDGTEGPRCQSVREFSRLLLQRPQLFGFEPEIAFWDERLSTSAVERMMIGWDMTRKR 135 Query: 117 NKGKVDSASAVIILESYFEQ 136 VD +A IL+ ++ Sbjct: 136 RDEVVDKMAAAYILQGALDR 155 >UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B658_HERA2 Length = 158 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 66/132 (50%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G K IGVA+ A P + AQ + + ++ E + E+++GLP Sbjct: 8 GRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L + G + F+ + R + + L+DER ++VEA L G ++ ++ VD Sbjct: 68 LTLRGEVGAQAKAVQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVD 127 Query: 123 SASAVIILESYF 134 +A++IL+ Y Sbjct: 128 ELAAILILQDYM 139 >UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZF9_9FIRM Length = 148 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 11/141 (7%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G +IGVA + TA+ L +I + D I +L+E EI++G+PLN Sbjct: 3 VLALDVGEATIGVARSDALGITAQGLLSIFRESIKKDTTKIIDILREDDYSEIVIGMPLN 62 Query: 65 MDG---TEQPLTARARKFANRIHGRF------GVEVKLHDERLSTVEARSGLFEQGGYRA 115 G EQ + KFA+++ + ++V+ +DER +T AR L + G Sbjct: 63 TYGEAKNEQSIFTE--KFADKLQNKLRSSGMSNIKVEFYDERFTTKMARDVLIQGGIKGK 120 Query: 116 LNKGKVDSASAVIILESYFEQ 136 K +D +AVI+L+SY ++ Sbjct: 121 KQKDVIDKQAAVILLQSYLDK 141 >UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1N1_9ACTO Length = 155 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG + D+G IGVAV + P ++ + + L+ E Q E+++G+ Sbjct: 4 SGVRIGVDYGKSRIGVAVTDPSGKISFPHTTLQFSPYGVHLDELLNLIVEKQAIEVVIGM 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P++++G E R FAN + + V L DERL+T +A +GL E G K K Sbjct: 64 PVHLNGKEGSSAEFVRDFANELAVEIPDIRVCLMDERLTTNQAHAGLSEMGVDNRARKNK 123 Query: 121 VDSASAVIILESYFE 135 +D +A IILE+ E Sbjct: 124 IDQLAASIILENAIE 138 >UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=B6BIR6_9PROT Length = 131 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G K IG+A PLPAI ++ +++ LKEW+ D +++G+PL Sbjct: 4 IAIDLGLKRIGLAYSAH-KDLVTPLPAIMRKNRNQASAEVKKALKEWEVDAVVIGVPLG- 61 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 +E + R F N ++ F E+ DE S++EA + + +G + + G++DS S Sbjct: 62 GSSEDEMRRRIAHFMNLVN--FEGEILYQDEAGSSLEAENMM--KGEIKYIRDGRIDSIS 117 Query: 126 AVIILESYF 134 A+IIL+ Y Sbjct: 118 AMIILQRYL 126 >UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protein n=1 Tax=Spiroplasma citri RepID=Q14MG2_SPICI Length = 139 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 2/138 (1%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ LA D G+K++G+A Q + T + D + L+ Q +IIVG Sbjct: 1 MAKYYLAVDVGSKTLGLATSQGLIATGYGVYRFPENDFLQAAQYLAGLITTEQFSDIIVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLH--DERLSTVEARSGLFEQGGYRALNK 118 P NM+ T P F N + + +H DERL+T +A + E R K Sbjct: 61 YPKNMNNTIGPRALMVSDFVNLLKQLLDPTITIHLVDERLTTHQAHQIMLEANLSRQKRK 120 Query: 119 GKVDSASAVIILESYFEQ 136 K DS +A +ILE+Y Q Sbjct: 121 QKKDSLAAQLILETYLHQ 138 >UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1W7_9PLAN Length = 153 Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 65/132 (49%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L+ D+GT IG+A+ A PL + G D +R+ +E + +VGLP Sbjct: 8 GRLIGVDYGTVRIGLAITDPEQKFASPLDNYTRRGGQADARYFQRVAQEERAAAWVVGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++ G+E + AR+FA ++ + V L DER ++ +A L G R K +D Sbjct: 68 VHTTGSESQKSTEARQFAKQLEELTKLPVFLFDERFTSADAEEMLIAAGMSRKERKSHLD 127 Query: 123 SASAVIILESYF 134 +A I+L ++ Sbjct: 128 KLAAQILLSAFL 139 >UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Mycoplasma pulmonis RepID=RUVX_MYCPU Length = 146 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGT-ARPLPAIKAQDGTPD--WNIIERLLKEWQPDEIIVGLP 62 +A D GTKS G A+ I+ + A PL ++ N ++ K+++ D II+G P Sbjct: 8 IALDLGTKSCGFAISDPISNSFAIPLENFFFEENNFKKVINKLKHYEKKYEFDTIILGYP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L M GT + +F + F + L DERLSTV+A++ L E ++ K K D Sbjct: 68 LRMTGTRSERSIMVEEFEKLLRKTFSQRIVLVDERLSTVKAKAMLKETNISQSKIKEKKD 127 Query: 123 SASAVIILESYF 134 S +A ++L Y Sbjct: 128 SMAAALLLNYYL 139 >UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Acetobacteraceae RepID=RUVX_ACICJ Length = 158 Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 11/136 (8%) Query: 5 LLAFDFGTKSIGVA---VGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 L+ D G+K IG+A VG+R+ A P A+K I + ++ +I+GL Sbjct: 19 LIGLDPGSKIIGIALSDVGRRL---ATPYGAMKRGKLAEAAATILDIARKEGAAALIIGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+ P AR +A+ I G+ V + DERLS+ L E RA G+V Sbjct: 76 PLSMDGSIGPAAQAARDWAHAIARETGLPVAMMDERLSSAAVNRALIEADVTRAKRAGRV 135 Query: 122 DSASAVIILESYFEQG 137 D+A+A SY QG Sbjct: 136 DAAAA-----SYMLQG 146 >UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Campylobacterales RepID=RUVX_SULDN Length = 130 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 6/131 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G K IG+A PL A++ ++ +++ L EW+ D ++VG+PL Sbjct: 4 IAIDLGLKRIGLAYSAH-KDLVTPLKAVERKNRDQAARDVKKTLIEWEVDAVVVGIPLG- 61 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 +E + R F N + F E+ DE S++EA S + +G + + G++DS S Sbjct: 62 GSSEDEMRRRVAHFMNLVA--FEGEIFYQDESNSSIEAESMM--RGEIKYIRDGRIDSIS 117 Query: 126 AVIILESYFEQ 136 A+IIL+ Y Q Sbjct: 118 AMIILQRYLRQ 128 >UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bifidobacteriaceae RepID=RUVX_BIFLD Length = 152 Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 18/147 (12%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIK-AQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L D G +G+A+ A P I A D + + ++++ D +IVGLPL Sbjct: 4 LGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLPLQ 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVE-------------VKLHDERLSTVEARSGLFEQG 111 MDGTE +AR++A + R E V L DERL+TV A LFE Sbjct: 64 MDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFE-- 121 Query: 112 GYRALNKGK--VDSASAVIILESYFEQ 136 ++A NK + VD SAV+IL++ ++ Sbjct: 122 AHKASNKHRPVVDQQSAVVILQTALDR 148 >UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wolbachia RepID=RUVX_WOLPM Length = 155 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 60/132 (45%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ D G K IG+A + A ++ + D + R+ KE + +++GLPL Sbjct: 19 IMCLDMGEKQIGIAFSDKTQLIATAHSIYHRKNMSKDLGYLHRIFKENESGSMVIGLPLK 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD E +FAN+I ++ V + L DE ST A L G +K D Sbjct: 79 MDEQETKWCKTIIQFANKIIKKYKVNIYLQDESFSTSIATHTLKITGISITKSKKIDDKI 138 Query: 125 SAVIILESYFEQ 136 SA IIL+ ++ Sbjct: 139 SACIILQRTLDK 150 >UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5Y4_VITVI Length = 679 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 6/135 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G G+A+ + + RPL +K + + ++E +E + DE I+GLP Sbjct: 510 GFSLGVDLGMSRTGLALSKGFS--VRPLSVLKLRGQKLELQLLEIAGRE-EVDEFIIGLP 566 Query: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 ++ DG E P + + R A R+ R G V L DE ++ EA S + + G ++ + Sbjct: 567 VSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSEEALSLMIDMGHSKSARQN 626 Query: 120 KVDSASAVIILESYF 134 ++D+ +A+++LE YF Sbjct: 627 RIDAYAAMMVLERYF 641 >UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RUVX_PARUW Length = 150 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 7/138 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI-----IERLL--KEWQPDEI 57 +L DFG IG+A A PL + + + I I +L ++ + +EI Sbjct: 10 ILGIDFGMSRIGLAQSDERKIIAMPLITVHTEKKSEQTVIKLLETISQLCETQKCEIEEI 69 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALN 117 ++GLPL M G L + FA + + ++L DERL+TV+A L E R Sbjct: 70 VIGLPLMMSGRTGFLADEVKHFAQLLQQLTPIPIRLWDERLTTVQAERSLRESQLTRKKR 129 Query: 118 KGKVDSASAVIILESYFE 135 VD SA IIL+SY + Sbjct: 130 SKVVDIVSASIILQSYLD 147 >UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A648_GEMAT Length = 168 Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 46/133 (34%), Positives = 64/133 (48%), Gaps = 1/133 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT-PDWNIIERLLKEWQPDEIIVGL 61 G LLA D+G K IG+AV + A P I + G P I R + I GL Sbjct: 6 GRLLAVDWGDKRIGLAVSDELGMLASPAGVIARRAGKRPPIAEIMRQAEALGVSGYIFGL 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+ G E + R+ A ++ R + V+L DER +T A + EQGG KG V Sbjct: 66 PLDPGGDETDRSREVREVAGKLATRQPLPVRLVDERFTTSAALRSIREQGGSTRGRKGDV 125 Query: 122 DSASAVIILESYF 134 D+ +A ++LE Sbjct: 126 DALAACVLLEGVL 138 >UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Rickettsia RepID=RUVX_RICB8 Length = 154 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVG 60 + L++ D+G+K IG+A+ + A PL I +A +++E++ ++++ I++G Sbjct: 16 NAPLISIDYGSKKIGIAISNQERNIAMPLNIITEASKKAIIASLLEKI-EQYKACGIVIG 74 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP++M G + +A KFA + + + L DERL+T A + L G R Sbjct: 75 LPIDMSGMQTEQSAIVIKFAEELTKSINLPIYLQDERLTTKAANNFLKSFGIKRKERNNN 134 Query: 121 VDSASAVIILESYF 134 D+ +A +ILE+ Sbjct: 135 DDAVAASMILETVL 148 >UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alphaproteobacteria RepID=RUVX_BEII9 Length = 165 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 40/132 (30%), Positives = 57/132 (43%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D GTK+IG+++ A PL I+ T D + L ++ ++GLPLN Sbjct: 21 LIGIDLGTKTIGLSLSDVERRIATPLETIRRTKFTKDAERLLALADQFDVAAFVIGLPLN 80 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P F + G DERLST L Q RA VD Sbjct: 81 MDGSAGPRVQATEAFVRSLSGLTSRPFCYWDERLSTAAVTRDLIAQDASRAKRAAVVDKL 140 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 141 AAAFILQGALDR 152 >UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHC7_KYTSD Length = 161 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLK-EWQPDEIIVGLPLNM 65 A D G +GVA G A P+ + G + + +L++ E + ++VGLP ++ Sbjct: 4 AVDVGLARVGVASGDPDGVLATPVETVAVAPGLTALDRVVQLVRQEERSTGVVVGLPRHL 63 Query: 66 DGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E AR++A + R G V V L DERLSTV A G+ E G + ++D Sbjct: 64 DGHESTSAVEARRWATALASRLGPTVRVWLVDERLSTVAASRGMREAGVRAKEQRTRIDQ 123 Query: 124 ASAVIILESYFE 135 A+AV IL+ + Sbjct: 124 AAAVEILQMSLD 135 >UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGY5_RHOM4 Length = 145 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 44/139 (31%), Positives = 73/139 (52%), Gaps = 6/139 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A D+GT+ +G+A+ + A+P + +++RL E + +++G Sbjct: 1 MRPRVVAVDYGTRRVGLALADPLRVIAQPYGTYAPEAAL---QVLQRLHAEEGIETLVIG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA--LN 117 PL GTE T R +F R+ GV++ DER ++ A+ L E GG R + Sbjct: 58 WPLTEAGTEGEATRRVERFIRRLRRLLPGVQIVRWDERYTSELAKERLREVGGPRKKRRD 117 Query: 118 KGKVDSASAVIILESYFEQ 136 KG++D +AVIIL+ Y EQ Sbjct: 118 KGRIDQMAAVIILQEYLEQ 136 >UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR Length = 254 Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 6/135 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G GVA+ + T RPL ++ + + ++E + + + DE I+GLP Sbjct: 89 GFSLGVDLGLSRSGVALSKGFT--VRPLTVLELRGQKLELRLLE-IAENEEVDEFIIGLP 145 Query: 63 LNMDGTEQPLTARARKFANR---IHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 + DG E P + + R A R + G V L DE ++ EA + + + G ++ + Sbjct: 146 KSWDGKETPQSNKVRSVAGRFAVLAAHRGWRVYLQDEHGTSTEATNRMIDMGLNKSTRQK 205 Query: 120 KVDSASAVIILESYF 134 KVD+ +AV++LE YF Sbjct: 206 KVDAYAAVMVLERYF 220 >UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Alphaproteobacteria RepID=RUVX_SINMW Length = 165 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 61/129 (47%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDG 67 D GTK+IG++V A P I+ D + ++ + ++GLP+NMDG Sbjct: 22 LDLGTKTIGLSVSDLGRRFATPRDVIRRVKFGIDAQALLFFAEKEKVAAFVIGLPVNMDG 81 Query: 68 TEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAV 127 +E P R F + R + L DERLSTV A L E R ++DSA+A Sbjct: 82 SEGPRCQATRAFVRTMGERTDIPSVLWDERLSTVAAERVLIEMDVSRKKRADRIDSAAAS 141 Query: 128 IILESYFEQ 136 IL+ ++ Sbjct: 142 FILQGALDR 150 >UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNR4_9RICK Length = 156 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 8/135 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G K+IG++V A P I + + +++E++ I++G P+N Sbjct: 22 ILGIDPGKKNIGLSVSDPNQKIATPFKIIVMKKFKQFLEELNNIIREYEIKGIVIGNPIN 81 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK---- 120 MDGT P + AR FA I + + L DERLS+ G F G +N K Sbjct: 82 MDGTSGPRSQSARDFAQNISKNTKLPITLWDERLSS----EGAFNLMGDLDINSSKKSKN 137 Query: 121 VDSASAVIILESYFE 135 +D +A IL+ Y + Sbjct: 138 LDQHAAAFILQGYLD 152 >UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cyanobacteria RepID=RUVX_SYNY3 Length = 152 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 66/130 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G K IGVA A + I D I++L++E + ++VGLP M Sbjct: 8 LGLDVGRKRIGVAGCDGTGLIATGITTIVRSSYDQDIAQIKQLVEERNVNLLVVGLPYTM 67 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G + +KFA R+ + + ++ DERLS+VEA + L + + + +KG +D + Sbjct: 68 AGEIGSQAKQVQKFARRVAEQLHLPLEYMDERLSSVEAENQLKARKRFSSYDKGLIDQQA 127 Query: 126 AVIILESYFE 135 A IIL+ + + Sbjct: 128 AEIILQQWLD 137 >UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5H3_THEAS Length = 142 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G IGVA+ A PL +K ++G P ++ L++ I+VGLP Sbjct: 6 GRVMALDLGEVRIGVALSDPSRSFASPLEVLKMEEGWP--LKVKELVERNSVTLIVVGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + DG+ P R + + VE+ DER +T A+ L E R KGKV Sbjct: 64 IRTDGSSGPEVQRVMGWLEELKAVVQQVEIVTVDERFTTSIAQRFLLEGDVRREKRKGKV 123 Query: 122 DSASAVIILESYF 134 D +A ++L+ Y Sbjct: 124 DKVAAALMLQDYL 136 >UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLD1_9PROT Length = 168 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ DFGTK+IG+AV A P+ I+ + + D I L+ +VGLPLN Sbjct: 19 LMGLDFGTKTIGIAVSDAALRVASPVTIIRRRKFSEDAAEILALVGSRNIGGFVVGLPLN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST--VEARSGLFEQGGYRALNKGKVD 122 MDGTE P R + R + DER+ST VE R+ + E R K +D Sbjct: 79 MDGTEGPRCQSTRDLTAELLLRHDLPTVFQDERMSTQAVE-RAMISEADLTRGQRKKSID 137 Query: 123 S 123 S Sbjct: 138 S 138 >UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFM1_9BACT Length = 138 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 66/134 (49%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G K IG+A+ ++PL + + +++L+ Q +I+G+P Sbjct: 5 GRILALDYGEKRIGIALSDPNRIFSKPLCVLSNKGFEQLVEELKKLITLHQVTLLIIGIP 64 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +DG+ P T ++ NR+ + V+ DER ST EA L + G K D Sbjct: 65 YAIDGSITPKTEECQQILNRLKDVLSISVEGFDERYSTWEANEELKKMGYNWRQAKEIKD 124 Query: 123 SASAVIILESYFEQ 136 + SA +IL+ + Q Sbjct: 125 AMSAAMILKEFLNQ 138 >UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Clavibacter michiganensis RepID=RUVX_CLAM3 Length = 161 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 1/134 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G+ LA D G IG+A A P+ + + G+ D I + E E++VGL Sbjct: 4 GSRLAVDVGKARIGLARSDPHGLIATPVETVPRDPAGSADVRRILAVATEIDCAELVVGL 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G T A FA R+ + V+L DERLSTV A+ L G K + Sbjct: 64 PLALSGRATASTDDAEGFARRLADATEIPVRLVDERLSTVSAQGALRASGRGSRKQKPVI 123 Query: 122 DSASAVIILESYFE 135 D +AVIIL+ E Sbjct: 124 DQVAAVIILQHALE 137 >UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candidate division TM7 RepID=A5KT02_9BACT Length = 138 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 5/135 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +++A D GTK IG+A T P+P + + + ++ E +P IIVG P Sbjct: 7 SVIALDVGTKRIGIAHAD--TAVRFPVPYGTLEVDGLEIERLREIIAELEPSLIIVGYPR 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 N G T ++FA ++ F +++ DE L++V A L Q + K +D+ Sbjct: 65 NQQGEPTAQTGVVKEFAQKLEP-FQIDILFQDESLTSVLAEKYL--QSQNKPYTKSDIDA 121 Query: 124 ASAVIILESYFEQGY 138 +A IIL Y E+ Y Sbjct: 122 HAAAIILGDYLEEAY 136 >UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8L7_COPPD Length = 137 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 49/135 (36%), Positives = 66/135 (48%), Gaps = 14/135 (10%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A DFG K IG+A A P ++ D IIE LK+ P +++GLP N Sbjct: 2 IVAVDFGLKRIGMARSDDSETWAFPHKTLEGNDLETKL-IIE--LKKIGPRVVVLGLPRN 58 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL-----NKG 119 MDGTE + R R+ G V DERL+ S L + R+L +KG Sbjct: 59 MDGTEGEMAVAVRALGQRLED-VGFTVDFWDERLT-----SRLVSRQDPRSLKKAIKDKG 112 Query: 120 KVDSASAVIILESYF 134 KVD SAV+IL+ Y Sbjct: 113 KVDLMSAVLILQEYI 127 >UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGE6_LIBAP Length = 160 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 1/131 (0%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMD 66 + D GTK IG+A+ A P P + + T + + I+GLPLNM+ Sbjct: 21 SIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGLPLNMN 80 Query: 67 GTEQPLTARARKFA-NRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G+E P R F N I + V DERL+TV A+ L + R KVDS + Sbjct: 81 GSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQKVDSIA 140 Query: 126 AVIILESYFEQ 136 A +IL+ ++ Sbjct: 141 AALILQEVLDR 151 >UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCAP Length = 146 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 9/139 (6%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNII----ERLLKEWQP--DEIIV 59 L+FD GTK+ G A+ + +A L I+ + D+N + + ++K +Q D ++ Sbjct: 4 LSFDLGTKTCGFAISDILEISANALETIRFVEN--DFNAVIVKVKEIIKMYQNSIDAFVL 61 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 G PL +G++ T FA + F G+ + L DE ST++A+ L + K Sbjct: 62 GYPLRSNGSKSERTMMVDNFAILLANEFPGINIYLVDEYGSTIKAQRILKDAKLSNKKTK 121 Query: 119 GKVDSASAVIILESYFEQG 137 K D+ SAVIIL + + G Sbjct: 122 SKKDTVSAVIILNDFLQYG 140 >UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HX36_9SPHI Length = 137 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 7/136 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D GTK G+AV + A PL I + + I+ + + + D +++GLP Sbjct: 4 VLAIDLGTKRTGLAVTDPLKMLANPLETI---ETFKLIDFIKAYIAKEEVDTLVLGLPTK 60 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGY---RALNKGK 120 ++G + +T + ++ F +V+L DER ++ A + G R G Sbjct: 61 LNGKDNEMTPKVMAMKTKLEKNFPSQKVELVDERFTSKMAMQSMITMGSKKKDRREKAGN 120 Query: 121 VDSASAVIILESYFEQ 136 +D SA IIL+SY E+ Sbjct: 121 LDKVSAAIILQSYLER 136 >UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Corynebacterium RepID=RUVX_CORJK Length = 155 Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 1/134 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D GT IGVA+ A P+ I+A D + + ++ EI+VGLP Sbjct: 15 GRRLGLDVGTVRIGVAISDPDCILATPVETIQATADDADVQRVVEICRDNFVVEIVVGLP 74 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + + G T A +FA + + V++ DER+ST+ A G + K+ Sbjct: 75 VALRGNHTQSTLNAEEFARLVKEELPDIPVRMVDERMSTMAATHAFHASGVNSKKGRKKI 134 Query: 122 DSASAVIILESYFE 135 D A+AV IL+ + + Sbjct: 135 DQAAAVHILQGWLD 148 >UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Actinomycetales RepID=RUVX_CORA7 Length = 182 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 13/149 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-----TPDWNIIERLLKEWQPDEI 57 G L D GT IGVAV R A P+ ++ + G D + + L+ E+ E+ Sbjct: 16 GRRLGLDVGTVRIGVAVSDRDARLAMPVETVRRETGFKDRDKDDIDRLLDLIHEYDAVEV 75 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVE--------VKLHDERLSTVEARSGLFE 109 VGLP ++ G A++ A RI R + V++ DERL+TV A S L Sbjct: 76 AVGLPRDLKGNGSSSVKHAKEIAFRIRRRLAKDDRMKEPPPVRMVDERLTTVVATSALRA 135 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQGY 138 G + +D A+AV IL+S+ + + Sbjct: 136 SGVSEKRGRSVIDQAAAVEILQSWLDARH 164 >UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfovibrionales RepID=C8X295_DESRD Length = 142 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L DFG K +G+A+ PL ++ + + ++ + + +++GLP ++ Sbjct: 4 LGIDFGLKRVGLALSDSQATVVTPLATVQRSTRQALFEELLAYIETYAIEAVVIGLPYDL 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 +GT T +AR F + R + + DE L++ A L E G R K +D + Sbjct: 64 EGTATLTTRQARNFGTSLARRIALPIYYVDEVLTSEFAGEALREAGVPRHKRKDLLDQHA 123 Query: 126 AVIILESYFEQG 137 AV ILES+ G Sbjct: 124 AVAILESFLASG 135 >UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B0A4_9BACI Length = 111 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 50/89 (56%) Query: 47 RLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSG 106 +++KE+ I+VGLP NM+GT P ++ FA + FG+ V L DERL+T+ A Sbjct: 20 KIIKEYDVSTIVVGLPKNMNGTIGPRGEASQFFAGELERLFGLPVVLWDERLTTMAAERV 79 Query: 107 LFEQGGYRALNKGKVDSASAVIILESYFE 135 L E R K +D +A +IL+ Y + Sbjct: 80 LLEADVSRKKRKKVIDKMAASMILQGYLD 108 >UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Prochlorococcus marinus RepID=RUVX_PROM0 Length = 153 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L+ D G+K IG+A + T+ LPA+K + + II + E+ IVG+PL Sbjct: 10 SILSLDIGSKRIGLAYCDPLCITSNILPAVKRFENNQEIKIIRNYINEFNLTGFIVGIPL 69 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + + + + +E ST E+ E+ G + G +DS Sbjct: 70 DEKGKMTTQAIDCKNYGQLLSNELKLPFSYVNEHSSTWESS----ERFGIKKDKSGLIDS 125 Query: 124 ASAVIILESYFEQG 137 SA IILE + E+G Sbjct: 126 FSAKIILEQWIEEG 139 >UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZND8_9PLAN Length = 159 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/134 (31%), Positives = 60/134 (44%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G + DFGT IGVA+ A P + D E L K + +VGLP Sbjct: 13 GRIAGIDFGTVRIGVAITDPDRILASPFENYTRRSLKIDRQYFEELAKLERIVLFVVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E + ARKF + GV + +DER +T A+ L G + K +D Sbjct: 73 VHMSGNESGKSGEARKFGQWLGRITGVPIVYYDERFTTSIAKDYLAGLGMTKQKKKAVID 132 Query: 123 SASAVIILESYFEQ 136 +A I+L +Y E Sbjct: 133 KLAAQILLTAYLEN 146 >UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonifex degensii KC4 RepID=C9R8A9_AMMDK Length = 146 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G K+IGVAV TA+ L + + D + L + ++ +E+++GLP Sbjct: 3 ILALDVGDKTIGVAVSDPFGLTAQGLKVLHRGEEAEDVQHVLELARRYEVEEVVIGLPRT 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 + G P + +F + + G+++ DER +T EA L R + D Sbjct: 63 LAGEIGPQAQKVLRFGE-LLAQQGLKIIYWDERFTTKEAEKVLLAADVSRKKRRRVKDIL 121 Query: 125 SAVIILESYFEQ 136 +AV++LE+Y E+ Sbjct: 122 AAVLLLEAYLEK 133 >UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chlorobiaceae RepID=RUVX_PROA2 Length = 142 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 14/141 (9%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDE----IIVG 60 ++A D+GTK IG+A + A+P+ GT + R +KE + I++G Sbjct: 9 IIAVDYGTKRIGLAKTDPLQLFAQPV-------GTFSEEALFRAIKEISGLDGIGRILIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA--LN 117 PLN DG+ +T FA R+H F + ++L +E S+ A L G R Sbjct: 62 YPLNADGSHNRMTDIVDAFAARVHNEFPDIPLELVNEHGSSRSAGQILINSGLSRKKRHE 121 Query: 118 KGKVDSASAVIILESYFEQGY 138 KG++DSASA ++L+++ ++ + Sbjct: 122 KGRLDSASACVLLQAHLDKSH 142 >UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG46_9BACT Length = 149 Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D+G + +GVA G I G A PL AI + L +E + + + G P N Sbjct: 3 CIGVDYGERRVGVAFGDDI-GVATPLQAIVKATEEERIQALVDLARERRATDFVFGYPYN 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+G+ F +++ + V DERL++VEA ++ GK+DS Sbjct: 62 MNGSVGFKAKEVDAFIDKLLKAIDLPVHRLDERLTSVEASKAFPKKRDDELRRSGKIDSV 121 Query: 125 SAVIILESYFEQ 136 +A +IL+ Y Q Sbjct: 122 AASLILQDYLNQ 133 >UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Firmicutes RepID=RUVX_STACT Length = 142 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 3/138 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEII 58 ++ ++ D G+K++GVAV + TA+ L ++ + + I + ++K+ D ++ Sbjct: 2 LTHKIIGLDVGSKTVGVAVSDLMGWTAQGLDTLRINEEENELGITKLAEIIKKEDADTVV 61 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +GLP NM+ + + K+ + + V + DERLST+ A L E R+ Sbjct: 62 IGLPKNMNNSIGFRGEASLKYKEELLKILPDINVVMWDERLSTMAAERSLLEADVSRSKR 121 Query: 118 KGKVDSASAVIILESYFE 135 K +D +AV IL+ Y + Sbjct: 122 KKVIDKMAAVFILQGYLD 139 >UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Anaplasmataceae RepID=RUVX_ANAPZ Length = 166 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 60/131 (45%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG + IG+A+ A P ++ D + +L+ +++G PL Sbjct: 19 ILGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDLGELSAVLRSEDAAVVVMGNPLQ 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG E + R FA ++ + GV + LHDER +T A E G R ++ D Sbjct: 79 SDGLEGEMCQIVRAFAQKLIKKSGVSIYLHDERYTTAMASRATREAGLRRKESQKIDDKI 138 Query: 125 SAVIILESYFE 135 SA ++L+ + Sbjct: 139 SAALVLQQVLD 149 >UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Alphaproteobacteria RepID=RUVX_CAUSK Length = 164 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 12/139 (8%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++ D G K+IGVAV A PL IK + D + +L+ + I++GLP+N Sbjct: 19 IVGLDPGEKTIGVAVSDVTLTVASPLALIKKTKFSEDAATLFQLMGSRKAAGIVIGLPMN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLH------DERLSTVEARSGLFEQGGYRALNK 118 MDGTE R +NR GR + ++ H DERLST L E+ + Sbjct: 79 MDGTEG-----VRCQSNRALGRNLLRLQPHIPITFWDERLSTAAVTRVLIEEHDVNRKRR 133 Query: 119 GK-VDSASAVIILESYFEQ 136 + VD +A IL+ E+ Sbjct: 134 AEVVDKMAAAWILQGALER 152 >UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Gloeobacter violaceus RepID=RUVX_GLOVI Length = 156 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 4/133 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITG-TARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++L D G+K IGVA G TG A L I + D + I ++ + +++GLP Sbjct: 5 SVLGLDVGSKRIGVA-GCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NM+G+ P R + F ++ V + DERLSTV+A L R K +D Sbjct: 64 RNMNGSLGPQAHRIQHFGQQLARVIDVPIDYVDERLSTVQAGRALQSVSATR--RKALID 121 Query: 123 SASAVIILESYFE 135 +A IIL+ + + Sbjct: 122 QQAAAIILQQWLD 134 >UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hydrogenothermaceae RepID=RUVX_SULSY Length = 145 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 6/134 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G K IGVAV TA PL I + + I L+K ++ +I++GLPL Sbjct: 4 ILGLDIGLKRIGVAVSDPFGVTATPLEFILNDEKV--FEKINDLIKNYKISKIVIGLPLT 61 Query: 65 MDGTEQPLTARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + G E ++F + +E+ DER ++ A L + K K+D Sbjct: 62 LKGEEGEQARYTKEFVENLKNHIPQDIEIIFVDERFTSSLAEKTLLQTKKKNK--KEKID 119 Query: 123 SASAVIILESYFEQ 136 S SAV IL++Y ++ Sbjct: 120 SLSAVFILQTYLDR 133 >UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax=Bacteroidetes RepID=Q1VUW8_9FLAO Length = 137 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A DFG K G+A+ + A L ++ ++ + ++++++E D ++VG Sbjct: 1 MKTKVIALDFGMKRTGIAISDEMKMIASGLRTVETRNLMQE---LKKIIEEESVDTLVVG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRAL--N 117 P ++DG L F + F + +K DER ++ A + + G + N Sbjct: 58 QPKHIDGKPMQLEKNILYFIEDVQALFPSLVIKRIDERFTSKMAFQTMIDSGLKKKQRQN 117 Query: 118 KGKVDSASAVIILESYFE 135 KG VD SA IIL++Y + Sbjct: 118 KGLVDEISATIILQNYLQ 135 >UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tropheryma whipplei RepID=RUVX_TROW8 Length = 145 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 9/133 (6%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L DFG+ IGVA + A P+ + I R + DE+++GLPL Sbjct: 10 FLGLDFGSTRIGVA--RNCGSLAVPVGVLPRASCAEILGYISR----YSIDEVVIGLPLT 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG-GYRALNKGKVDS 123 + G E+ +AR K +R GV+V+ DER +TV A + G G + + K VD+ Sbjct: 64 LAGKEKQ-SARLAKEFSRFLVSSGVQVRFFDERFTTVIATQKFYSLGKGVKQIRKC-VDA 121 Query: 124 ASAVIILESYFEQ 136 A+A ++L+ + + Sbjct: 122 AAATVMLQLFLDM 134 >UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0P3_ERYRH Length = 144 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI-IERLLKEWQPDEIIV 59 M G ++ D G+K+ GVA+ + A P+ + + + ++ L+K+ + I + Sbjct: 1 MIGKIIGLDLGSKTCGVALSDGLGMYAHPVETLYYKVSIDELKEPLDSLIKKERVKVIAL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G P M+ + +F + F EV L DERL++V A L +Q R K Sbjct: 61 GFPKMMNNDVGERAQISEEFKKTLESWFNCEVVLIDERLTSVVANRQLIDQDVSRKKRKK 120 Query: 120 KVDSASAVIILESYFEQ 136 VD +AV IL++Y ++ Sbjct: 121 VVDQLAAVHILQTYLDK 137 >UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Mycoplasma hyopneumoniae RepID=RUVX_MYCH2 Length = 143 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW-NIIERL---LKEWQPDEIIVG 60 +LA D G K+ G A+ + + PL D+ ++I R+ +KE+ +++G Sbjct: 7 ILALDLGIKTCGFAISDQNWKISYPLEQFNF--NRYDFASVISRIAFWMKEYPISILVLG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PL + G P T FA+ + + ++V DERL+T +A++ L + G + Sbjct: 65 YPLTLAGKISPRTKMVEYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKV 124 Query: 121 VDSASAVIILESY 133 +D +A IILE + Sbjct: 125 IDKLAAQIILERF 137 >UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=C5EZY4_9HELI Length = 135 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 6/132 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D G K IG+A Q + PLP I ++ + L++ P +++G+P Sbjct: 3 NIIALDIGLKRIGIA--QFLQNIPIPLPPILRKNRNQAARDVSNLIQMKNPQILVIGIPQ 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK-GKVD 122 + D + + + R + F N + G+E+ DE S+ EA + QG + K G +D Sbjct: 61 DGDSSLE-MERRIKHFINLLEIPKGIEICFIDESFSSFEALQKM--QGSKKNKKKDGSLD 117 Query: 123 SASAVIILESYF 134 S +A+IILE Y Sbjct: 118 SLAALIILERYL 129 >UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Q1_9ACTN Length = 119 Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 57/110 (51%) Query: 27 ARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGR 86 A P+ + A + T L+++++PD ++ G PL M G P R A +I Sbjct: 2 AMPVKVLPAAEVTGMAKTFRYLVEDYEPDILVSGRPLTMAGEPGPQAERVAAVAQKIADE 61 Query: 87 FGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 + ++ DERLS+ EA+ L EQG +GK+D +A + L+++ ++ Sbjct: 62 LDLPLEFEDERLSSQEAKRILREQGLNEKQMRGKIDMIAASLFLQTWLDR 111 >UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Desulfovibrionales RepID=RUVX_DESDG Length = 144 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 61/129 (47%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+GT+ G+AV A P I + + +++E +P ++VGLPL Sbjct: 4 LGIDYGTRRTGIAVTDGAGMMAFPRRTIVMSTRDAFFAELLSVVEEERPAGVVVGLPLLA 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G E +T + R F R+ R + V L E LS+ EA L E G + VD + Sbjct: 64 GGEETLITRQVRNFVARLRRRSSLPVYLVAEELSSFEAGEDLREAGLSFREREAVVDQQA 123 Query: 126 AVIILESYF 134 AV ILES+ Sbjct: 124 AVRILESFL 132 >UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJF8_9BACT Length = 140 Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 8/137 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ DFGTK G+A + A L + + P +++ + + D +VG P Sbjct: 2 GSLIGIDFGTKRTGLACTDPLKIIASGLKNLSTPEVIP---FLKKYCEMEEVDTFVVGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVE-VKLHDERLSTVEARSGLFEQGGYRA---LNK 118 L DGT + + F ++ +F + ++ +DER ++ A + GG + +K Sbjct: 59 LQKDGTPAEVEVDIKNFIKKLQNQFPSQSIERYDERYTSKLAFQSMI-NGGLKKKQRADK 117 Query: 119 GKVDSASAVIILESYFE 135 G +D SA +IL+SY + Sbjct: 118 GMIDQVSATLILQSYLD 134 >UniRef50_B7FTD6 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FTD6_PHATR Length = 190 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 14/138 (10%) Query: 10 FGTKSIGVAVGQRITGTA-------RPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G KSIGV G TG A +PL +K + T + + R ++ Q I+VGLP Sbjct: 16 LGVKSIGVDYGLVRTGVAVTVGYDPKPLTILKDLNATEVCDAVIRCVRLEQASRIVVGLP 75 Query: 63 LNMDGTEQPLTARARKFANRIHGRF------GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 L+ +GT T F + + GV+V+L DER ++ A + + ++ L Sbjct: 76 LHKNGTIAEQTNLTLVFVAELAQKSLQELGPGVKVELFDERYTSKAAAARAHSRNPHQPL 135 Query: 117 NKGKVDSASAVIILESYF 134 G +D+ +A IILE+Y+ Sbjct: 136 -YGTLDADAACIILENYY 152 >UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Bacteria RepID=RUVX_FUSNN Length = 138 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 3/132 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G IGVA + A PL I + I E + KE + ++VG+P ++ Sbjct: 5 IALDIGDVRIGVARSDIMGIIASPLETINRKKVKSVKRIAE-ICKENDTNLVVVGIPKSL 63 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK-VDS 123 DG E+ + R++ ++ +E+ DER STV A + L E A+ K K VD Sbjct: 64 DGEEKRQAEKVREYIEKLKKEIENLEIIEVDERFSTVIADNILKELNKNGAIEKRKVVDK 123 Query: 124 ASAVIILESYFE 135 +A IIL++Y + Sbjct: 124 VAASIILQTYLD 135 >UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3186B Length = 133 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 11/132 (8%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G+ G A+ A P+ ++ + L+++ + D ++VGLPL Sbjct: 3 VLALDYGSARCGCALSDPTGTLATPIAHVERPGTRKGMARLVALVRDREVDRVVVGLPLG 62 Query: 65 MDGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + G + TA R FA R+ G + + L+DER +TV A R + D Sbjct: 63 LSGADTAQTAEVRAFAQRLGEALGEQIPIDLYDERFTTVIAE---------RVGGRESED 113 Query: 123 SASAVIILESYF 134 S +A ++LE + Sbjct: 114 SRAAAVLLEGWL 125 >UniRef50_A5B8B0 Putative uncharacterized protein n=1 Tax=Vitis vinifera RepID=A5B8B0_VITVI Length = 213 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 3/83 (3%) Query: 55 DEIIVGLPLNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQG 111 DE I+GLP++ DG E P + + R A R+ R G V L DE ++ EA S + + G Sbjct: 93 DEFIIGLPVSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSEEALSFMIDMG 152 Query: 112 GYRALNKGKVDSASAVIILESYF 134 ++ + +D+ +A+++LE YF Sbjct: 153 HSKSARQNSIDAYAAMMVLERYF 175 >UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=RUVX_THEEB Length = 151 Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 36/132 (27%), Positives = 65/132 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L D G K IGVA R+ A + I ++ D + R+ +E +++IVGLP Sbjct: 3 SVLGLDLGRKRIGVAGCDRLGQLATGITTIYRRNFASDVAQLRRICQERGVEKLIVGLPY 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +DG + + A +I + V+ DERL++ +A L ++ +K VD Sbjct: 63 TLDGQLGSQARQVQHLAEKIGAALNLPVEYIDERLTSFQAEEILKQRRRSPRHHKDLVDQ 122 Query: 124 ASAVIILESYFE 135 +A +IL+ + + Sbjct: 123 IAAALILQQWLD 134 >UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylobacterales RepID=D1B1D4_SULD5 Length = 135 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 6/129 (4%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMD 66 + D G K IGVA+ +G P AI ++ ++ L EW+ + ++VGLP Sbjct: 6 SLDVGLKRIGVALCL-ASGIVTPQEAILRKNRDQAAREVDAFLTEWEIELLVVGLPKG-G 63 Query: 67 GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASA 126 +E+ + R F + + F EV DE S++EA+ + QG R GK+DS +A Sbjct: 64 SSEEEMKRRITHFVSLLA--FSGEVVYQDEYGSSLEAKEMM--QGIMRQKRDGKIDSIAA 119 Query: 127 VIILESYFE 135 +ILE Y + Sbjct: 120 KVILERYLD 128 >UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aquificaceae RepID=RUVX_AQUAE Length = 131 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 6/131 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+GTK +G+A+G P + +++ I+ ++++ + ++IVGLPL Sbjct: 3 VLAVDYGTKRVGLAIGDEELKIVSPKGTVSSKEAVKK---IKEIVEKSRVGKVIVGLPLT 59 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E + F ++ E+ L DER +T EA L +G K D Sbjct: 60 PSGKEGQRAKLVKDFVEKLREELPNTEIILWDERWTTAEAMRRL--EGLPPKKKKELKDV 117 Query: 124 ASAVIILESYF 134 SA+IILE Y Sbjct: 118 ISAMIILEEYL 128 >UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMQ4_9FLAO Length = 132 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 8/131 (6%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW-NIIERLLKEWQPDEIIVGLPLNMD 66 D+G K G+AV + A L ++ TP+ + +E + E Q + I++G P MD Sbjct: 1 MDYGQKRTGIAVTDPLQMIASGLTTVQ----TPELLDFLESYMGEEQVERIVIGEPRRMD 56 Query: 67 GTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQG--GYRALNKGKVDS 123 + + A R F RI RF + + DER S+ A + E G + +K VD Sbjct: 57 NSPSGIEAEIRSFIERIKKRFPDLPLSRQDERFSSQMAVRAMIEGGMKKKKRRDKAAVDK 116 Query: 124 ASAVIILESYF 134 SA +IL+SY Sbjct: 117 ISATLILQSYL 127 >UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Bacteria RepID=RUVX_STAS1 Length = 142 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/135 (26%), Positives = 69/135 (51%), Gaps = 5/135 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEI---IVGL 61 ++ D G+K++G+A+ + TA+ L ++ + + I E L+K + D + ++GL Sbjct: 6 IIGLDVGSKTVGIAISDLMGWTAQGLDTLRIDEENNELGI-EALVKIIKRDNVGTVVIGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P NM+ + + ++ ++ +E+ + DERLST+ A L E R K Sbjct: 65 PKNMNNSIGFRGEASLQYKEQLQEALPSLEIIMWDERLSTMAAERSLLEADVSRQKRKKV 124 Query: 121 VDSASAVIILESYFE 135 +D +AV IL+ Y + Sbjct: 125 IDKMAAVFILQGYLD 139 >UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMF8_9BACT Length = 138 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 5/138 (3%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW-NIIERLLKEWQPDEIIV 59 M+ ++A D GT IGVA+ + A+ + D DW + + L+ ++V Sbjct: 1 MTRRIVALDMGTVRIGVAMSDPLGSFAQ---GVAVWDAEGDWLSDLRDLVTSRDVSTVVV 57 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 GLP+ +GT+ P + F +E+ + DER ++ A L E R K Sbjct: 58 GLPIRENGTKGPSAENVEAKTEAVREAFPDLEIVMWDERYTSTIANRVLIEGDVSRKKRK 117 Query: 119 GKVDSASAVIILESYFEQ 136 G+VD +A +IL+ Y + Sbjct: 118 GQVDKVAATVILQGYLDS 135 >UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJQ4_DESMR Length = 147 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 60/133 (45%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G +G+AV + A P I + + + +++E P I++G P Sbjct: 4 ILAIDYGQARVGLAVCAPGSEIAFPHSTIAWETRDDLFARLLAVIEEQNPGRIVIGYPAR 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G E + R FA R+ R V + DE ST EA L E G KVD+ Sbjct: 64 AGGDEGLTGRQVRNFAARLARRTAVPLAYADEAHSTEEAAERLREAGLSGRELLAKVDAM 123 Query: 125 SAVIILESYFEQG 137 +A +ILE Y G Sbjct: 124 AAAVILERYLRGG 136 >UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Synechococcus RepID=RUVX_SYNJB Length = 170 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 63/131 (48%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G + IGVA R+ A L I+ + + D ++ ++ Q ++VG+PL Sbjct: 17 LGLDVGNRRIGVAGSDRLGLLATGLGVIQRRSLSEDIAQVQEWIRRRQATVVVVGIPLLA 76 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + ++F + + + +E LST +A L E G KG +D S Sbjct: 77 DGSVGSQARKVQRFVRALQVAVDLPIVTVNEYLSTAQAEWDLREAGIPAKAQKGLIDQQS 136 Query: 126 AVIILESYFEQ 136 A +IL+++ ++ Sbjct: 137 AAVILQTWLDE 147 >UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sphingobacteriales RepID=RUVX_CYTH3 Length = 152 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 10/137 (7%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFDFGTK IG+A + A L + +D +++ L + +VGLP Sbjct: 4 ILAFDFGTKRIGIASTDPMQIIANALDTVHPKDVVV---YLKKYLNTEPVEAFVVGLPRT 60 Query: 65 MDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQG----GYRALNKG 119 + E A + F N I F + DER ++ A + G G R +K Sbjct: 61 LQNEESSNAANVKAFINLIKKNFPQTPIYGVDERFTSSMAFDTMLAGGVSKKGRR--DKA 118 Query: 120 KVDSASAVIILESYFEQ 136 +D SA IIL+S+ EQ Sbjct: 119 TIDKISATIILQSFMEQ 135 >UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mollicutes RepID=RUVX_MYCCT Length = 143 Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 8/141 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEII 58 M+ +++AFD G+K+IG+A + ++ L I+ ++ D + +E LK++ P I+ Sbjct: 1 MTQSIIAFDIGSKTIGLAYSSGVIASS--LDTIRFEEYNFDQGLKQLELYLKKYNPSIIV 58 Query: 59 VGLPLNMDGT----EQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR 114 VG P NM+ T + + F + ++ DER +T A++ L + R Sbjct: 59 VGYPKNMNNTIGERAEMVDYVIEMFLDMYKSFNKDQIIKVDERRTTKIAKNILIQANLTR 118 Query: 115 ALNKGKVDSASAVIILESYFE 135 K DS +A +ILE Y E Sbjct: 119 EKQKKYKDSLAAQLILELYLE 139 >UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GL40_9DELT Length = 140 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 2/130 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L DFG K +G+AV PL I + + +++E + I++GLPL Sbjct: 4 LGIDFGIKRVGLAVSDEKGKMVFPLKTIHRSTRENLFLELLNIIQERGIEAIVLGLPLGP 63 Query: 66 DGTEQPLTAR-ARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG E+ LT R A F + R + + +E +++EA L G K +D A Sbjct: 64 DG-EKSLTCRQAENFMQSLDRRTDLPIYTVNEAYTSMEAEDILNRCGIRVEKQKESLDQA 122 Query: 125 SAVIILESYF 134 +AVIILES+ Sbjct: 123 AAVIILESFL 132 >UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTW9_9FLAO Length = 138 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 8/138 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G G+A + A L + + +++ E + DE+++GLP Sbjct: 2 GQILAIDYGKARCGIAATDDMQIIASGLETV---ENRSLMEFLKKYFSENKVDEVVIGLP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGG---YRALNK 118 +++ G + KF F + V DER ++ A S Q G + K Sbjct: 59 IDLKGNISEVETDILKFIEEFKKEFSDIAVHRFDERFTSKMA-SFFISQSGKNKKKRQEK 117 Query: 119 GKVDSASAVIILESYFEQ 136 G +D SA IIL+++ EQ Sbjct: 118 GLIDKVSATIILQNFLEQ 135 >UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mobiluncus mulieris RepID=C2KQ01_9ACTO Length = 145 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 1/129 (0%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDG 67 D G +G+A T A P+ +K Q + + ++E + VGLP ++G Sbjct: 1 MDVGKVRVGIAQAYLDTILALPVKTLKVQADGSELEELASFIREETTTAVFVGLPRLLNG 60 Query: 68 TEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASA 126 E AR +A R+ + + V+L DERLS+V A L G +K VD +A Sbjct: 61 KEGEAARMARSYARRLARKISPIPVRLIDERLSSVTAHEKLRAAGVSTREHKKMVDQVAA 120 Query: 127 VIILESYFE 135 ILE E Sbjct: 121 QQILEQAIE 129 >UniRef50_D2NT33 Predicted endonuclease involved in recombination n=2 Tax=Rothia mucilaginosa RepID=D2NT33_9MICC Length = 187 Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVGL 61 G + D G +G A+ A PL ++ D ++ +L++ + E+ VGL Sbjct: 7 GVRMGVDVGNARVGTALSDPDGILATPLKTLRRDAKKNSDRRVLRKLIEVNEVVEVFVGL 66 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLH------DERLSTVEARSGLFEQGGYRA 115 P M G + P T AR++A + E K H DERL+TV A L E G Sbjct: 67 PKTMRGGDSPSTEMAREYAQALRSELDAEEKTHINIWLVDERLTTVSAHRALHEAGVSSR 126 Query: 116 LNKGKVDSASAVIILE 131 K VD +AV IL+ Sbjct: 127 DFKTMVDQVAAVNILQ 142 >UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT Length = 139 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 7/136 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G K G+AV + A L + + ++ + ++ D+I++G P Sbjct: 2 GRILAIDYGKKRTGIAVTDPLRIIANGLATVPTSEL---YDYLVAYIRSEAVDKIVIGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHG-RFGVEVKLHDERLSTVEARSGLFEQG---GYRALNK 118 + +G R +FANR + + ++ +DER ++V A + G R +K Sbjct: 59 IQANGQPSENFVRVEQFANRWKKVQPTIPIEFYDERFTSVIAHQAMIVGGVKKKTRREDK 118 Query: 119 GKVDSASAVIILESYF 134 G VD SA IIL+ + Sbjct: 119 GLVDEISATIILQDFM 134 >UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Desulfovibrio RepID=RUVX_DESVM Length = 142 Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDE--IIVGLPL 63 L D+GTK GVA TG + P T D E L + +VGLPL Sbjct: 4 LGIDYGTKRTGVAASD--TGGSMAFPRRTIVMTTRDRFFAELLAVAEEERAEAYVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG-GYRALNKGKVD 122 DGT+ T + R F R+ R + V L +E LS+ EA L + G RAL + VD Sbjct: 62 LHDGTDTLTTRQVRNFVERLKRRTTLPVYLMEEFLSSYEAEDDLRDAGLSGRAL-EAVVD 120 Query: 123 SASAVIILESYF 134 +AV IL+S+ Sbjct: 121 QQAAVRILQSFL 132 >UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVX_DESAP Length = 141 Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 57/130 (43%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D G + IGVA+ A PL ++ D I ++ ++ + ++ GLP Sbjct: 3 LMGLDIGDRRIGVALTDENGVAAYPLEVLERTSPEKDLRRITEIIDQYGVERVVAGLPKT 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 + G P + F +++ R V V DERL+T E L R + VD Sbjct: 63 LSGQIGPQGDKVLSFLDKLRVRSTVPVITWDERLTTAEVEKLLVSADLGRRRRRKVVDKL 122 Query: 125 SAVIILESYF 134 +A +IL SY Sbjct: 123 AATLILNSYL 132 >UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Actinomycetales RepID=RUVX_FRASC Length = 202 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 2/135 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G + D G+ +GVA A P+ + + + G D + + +++E Q E++VGL Sbjct: 24 GVRIGVDVGSVRVGVAASDPGGVLAVPVTTLARDRRGNADIDQLVLIVRERQAVEVVVGL 83 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P M G E R++A + R V V+ DERL+TV A + E+G + Sbjct: 84 PRQMSGQEGRAVRLVRQYAEVLAERIAPVPVRFVDERLTTVAAHRRMAERGVRSRARRSL 143 Query: 121 VDSASAVIILESYFE 135 VD +AV IL+ + Sbjct: 144 VDQEAAVQILQHDLD 158 >UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax=Epsilonproteobacteria RepID=A6DAL6_9PROT Length = 130 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 9/130 (6%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D G K IG+A PL AI ++ + LLKE++ D ++VG+P Sbjct: 4 IIAIDVGLKRIGIAYTPN-ASVVVPLNAIIRKNRNQAAKEVSNLLKEYKADILVVGIP-- 60 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 T + +T R + F N I F +++ DE ++ + +G + G++DS Sbjct: 61 --KTNEEMTKRIKHFTNLID--FNGKIEFVDESFTSAIVEEEI--KGKIKHKRDGRIDSL 114 Query: 125 SAVIILESYF 134 +A ILES+ Sbjct: 115 AAKKILESFL 124 >UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URD1_AKKM8 Length = 141 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 2/131 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+G IG+A + A P+ I T + I +L++E +++GLP+ M Sbjct: 8 LGIDYGEARIGIAATDPVGIMAHPVETIHRHQ-TDGISRIVQLVQERGIRTLVLGLPVRM 66 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DGTE A+ R F + G+ + DE L+TV A+ L G + +D Sbjct: 67 DGTEGTAAAKVRAFGRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQV 126 Query: 125 SAVIILESYFE 135 +AV IL ++ + Sbjct: 127 AAVEILNTWLD 137 >UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=Thermaceae RepID=RUVX_THET2 Length = 135 Score = 51.6 bits (122), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMD 66 A D G IG+AVG+ A + + D + ++ +++VGLPL D Sbjct: 5 ALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTD 64 Query: 67 GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASA 126 E + + R GVEV+L DER +T A+ L +KGK+D +A Sbjct: 65 LKESAQAGKVLPLVEALRAR-GVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDELAA 123 Query: 127 VIILESYFEQG 137 V++LE Y +G Sbjct: 124 VVLLEDYLARG 134 >UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Acholeplasmataceae RepID=RUVX_AYWBP Length = 151 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 14/138 (10%) Query: 6 LAFDFGTKSIGVAVGQRITGT-ARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLP 62 L D G K++G+A+ Q TG A+ L I D I +++++ ++Q +II+G P Sbjct: 10 LGLDLGEKTLGIALSQ--TGIIAQNLKTIFFDTHKYDQLIAPLQKIISQYQIKKIILGYP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 +M+ + F + +FG V+V L DERLSTV+A L KGK+ Sbjct: 68 KHMNNDIGIKAKISNYFKKTLENKFGQVKVILWDERLSTVQAIQILKTNNK----KKGKI 123 Query: 122 ----DSASAVIILESYFE 135 D +A IIL++Y + Sbjct: 124 LQMKDEIAASIILQNYLD 141 >UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SA15_PHYPA Length = 172 Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 17/148 (11%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTA-RPLPAIKAQDGTPDWNIIERLLKEWQP---DE 56 + G + D G G+A+ + G A RPL ++ Q G ++E +L+ P DE Sbjct: 11 VRGHTVGVDLGDAKTGLAIS--LGGYAPRPLTVVR-QRGD---KLLETILQVGIPQRADE 64 Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFGV-------EVKLHDERLSTVEARSGLFE 109 +VGLP DG + + R FA R+ GV V L DE ++ +A + + Sbjct: 65 FVVGLPKAWDGKDSDQANKCRSFAGRLANIAGVVAYCRGWRVYLQDEYGTSQDALDYMID 124 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQG 137 G R K ++D+ +A +L YFE G Sbjct: 125 MGSNRRSRKEQLDAYAATALLCRYFESG 152 >UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R453_9CHLA Length = 155 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 11/141 (7%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKE---------WQPD 55 +++ D+G IG+A+ A L + A+ + +L++E + + Sbjct: 9 IVSLDYGLARIGIAISDESQTIASSLKTVAAEKKVE--RTVAKLVEEINAHQQRLACEIE 66 Query: 56 EIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRA 115 EI+VGLPL M G + F + + DERL+TV+A L E R Sbjct: 67 EIVVGLPLLMSGKKGFQADEVLHFVELFKAATPIPIVTWDERLTTVQAERALREGSFNRK 126 Query: 116 LNKGKVDSASAVIILESYFEQ 136 +D+ +AV+IL++Y + Sbjct: 127 KRSKVIDAVAAVLILQNYLDH 147 >UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma gallisepticum RepID=RUVX_MYCGA Length = 142 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 7/135 (5%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKE-----WQPDEIIVG 60 +A D G++++G+A G A P I D+ LKE + + ++G Sbjct: 4 VALDVGSRTLGIATGDGEFKIASPYCVISF--NQYDFRQCLAELKEKTASFFYDFKFVIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 +P N+D T+ T F + + EV ++DE +++ A L + K K Sbjct: 62 MPKNIDQTKSSTTEMVENFIELLKANYKNEVIIYDESYTSIIADQLLIDNQIKAKKRKEK 121 Query: 121 VDSASAVIILESYFE 135 +D +A +IL+S+F+ Sbjct: 122 IDKLAAFVILQSFFD 136 >UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0ML47_9FIRM Length = 149 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 35/131 (26%), Positives = 66/131 (50%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D+G G+A R A P+ I ++ + E++ E++VG P+N Sbjct: 3 IMAVDYGDAHTGLACCDRTQTLASPIGVIDERNFQTCVEKVAAAAVEYEVGEVVVGNPIN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+GT P + + R FA+ + + V + DER +TV A + + + K +D+ Sbjct: 63 MNGTYGPRSEKCRMFADMLQNFLEIPVVMWDERSTTVTAHNMMNDVNKRGKERKKVIDAV 122 Query: 125 SAVIILESYFE 135 +A +IL++Y + Sbjct: 123 AAAVILQNYLD 133 >UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Bacteroidetes RepID=RUVX_BACTN Length = 138 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 6/134 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D+G K G+AV + A L + + N I + + + II+GLP Sbjct: 4 IVAIDYGRKRTGIAVSDTLQLIANGLTTVPTHEL---LNFIGGYVAKEPVERIIIGLPKQ 60 Query: 65 MDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRA--LNKGKV 121 M+ F + RF + V+ DER ++V A + E G + NK V Sbjct: 61 MNNEASENMKNIEPFVRSLKKRFPELPVEYVDERFTSVLAHRTMLEAGLKKKDRQNKALV 120 Query: 122 DSASAVIILESYFE 135 D SA IIL++Y E Sbjct: 121 DEISATIILQTYLE 134 >UniRef50_A9F903 Putative Hollyday junction resolvase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F903_SORC5 Length = 163 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/115 (35%), Positives = 57/115 (49%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDG 67 D G +GVAV + A P P + ++ + L ++ +VGLPL M+G Sbjct: 33 IDLGKARVGVAVTDELGLYAHPRPLLDGRNRKALLEALAALARDEGITRFLVGLPLEMNG 92 Query: 68 TEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 E P RA FA + GVEV+L DERL+TVEA L + G +K +VD Sbjct: 93 DEGPAARRALAFAQALADAAGVEVELVDERLTTVEAARRLRDGGVSGRKSKERVD 147 >UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrichaceae RepID=D2MPX3_9FIRM Length = 140 Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 3/133 (2%) Query: 6 LAFDFGTKSIGVAVGQR--ITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G+ + GV+ + I T + K +D + + +++ +PDEI++G PL Sbjct: 5 LGLDLGSVTCGVSASETGLIAHTVETI-RFKNEDYNEAMDKVLAIIEREKPDEIVLGYPL 63 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++G P + +F + G+ V L DER +TVEA L + R K K+D Sbjct: 64 LLNGDVGPRAQLSEEFKEVLEEECGLPVHLMDERFTTVEAEEILLQADISRKKRKKKIDQ 123 Query: 124 ASAVIILESYFEQ 136 +AV IL+ Y ++ Sbjct: 124 LAAVQILQYYLDR 136 >UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrobacter RepID=B8H9B9_ARTCA Length = 207 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GT +GVA+ R + A P + + D +I +L +E ++IVG+ Sbjct: 22 GVKLGVDVGTVRVGVAICDRDSILATPYKTLDRNTKKNSDVRLIAKLAEELGAVQVIVGM 81 Query: 62 PLNMDGTEQPLTARARKF-----ANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P M G E A + A V V + DERLS+V A L E G Sbjct: 82 PRTMKGEEHASARMASDYAGLLAAELAARGLDVPVNMVDERLSSVSAHRNLHEAGMSSRN 141 Query: 117 NKGKVDSASAVIILESYFE 135 ++ VD +A IL+ + Sbjct: 142 HRKVVDQVAAAGILQHAID 160 >UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Mycoplasma RepID=RUVX_MYCPN Length = 140 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 7/136 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD-WNIIERLLKE--WQPDEIIVGL 61 +L DFG K IG A+ I P Q+ N + + LK+ ++ +I++G Sbjct: 4 ILGIDFGLKRIGTALVNTIDRFPSPFRVFAVQNNLQQAVNTLFKDLKQAGYELVQIVIGF 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG-GYRALNKGK 120 P + + KF I RF V V L DE +T E ++ L E G R K K Sbjct: 64 P--HFHYQSSIQVSIHKFVELIKTRFNVPVTLIDESGTTSEVKANLQELGLKNRTFKKAK 121 Query: 121 VDSASAVIILESYFEQ 136 D+ +A +ILE + Q Sbjct: 122 -DTLAATLILERFLNQ 136 >UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TLR6_PHYPA Length = 171 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 9/140 (6%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVG 60 G LL D G+++IG+AV A P + + T NI +E L++E +++G Sbjct: 17 GRLLGLDVGSRNIGLAVSDPKCRIASPHSVMYRSNTTTLKNISRLESLVQEMNITGLVIG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIH--GRFGVEVKLH-DERLSTVEARS--GLFEQGGYRA 115 PL + G + A+ + FA + GRF ++ DERL++V + G + G R Sbjct: 77 YPLELTGFQGKQGAQVKLFAKELQMSGRFPNLAYVYWDERLTSVAVTNVIGSMDITGRR- 135 Query: 116 LNKGKVDSASAVIILESYFE 135 K VD SA+ IL+ + Sbjct: 136 -RKNIVDKMSALCILQGCLD 154 >UniRef50_Q9X1N1 Putative Holliday junction resolvase n=6 Tax=Thermotogaceae RepID=RUVX_THEMA Length = 218 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 23/134 (17%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G + GVA G+ + + +P ++ +++ +PD+II GLPL Sbjct: 13 VIVAVDYGERKCGVAFGEILPQKSLVIPT----------KNLKEFIRKLKPDKIIFGLPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +M G T + A + + E L DERL+T + G R + D+ Sbjct: 63 SMSGKYTQQTFKTVAVAFKFSKEY--ETYLCDERLTT---------KIGERISKRD--DA 109 Query: 124 ASAVIILESYFEQG 137 SA +I +S+FE Sbjct: 110 VSAALIFQSFFENS 123 >UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clostridia RepID=RUVX_CALS8 Length = 138 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 5/134 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G++ IGVA+ + A+P + Q ++ ++++ E Q ++I++G P++ Sbjct: 3 ILCLDIGSRRIGVAISDPLKIAAQPFCVLDLQKEDL-YSCLDKIFNEHQIEKIVIGYPVS 61 Query: 65 M---DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 D + L + + + + R+ V + DER ST L E+ K V Sbjct: 62 KFHPDKATEKLQ-KIDEICSELERRYKVGIIKWDERFSTKAVERILREENVSWQKRKKVV 120 Query: 122 DSASAVIILESYFE 135 D +AV IL+ Y + Sbjct: 121 DKLAAVYILQGYLD 134 >UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WSC3_RENSM Length = 169 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 8/140 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG--TPDWNIIERLLKEWQPDEIIVG 60 G L D GT +GVAV A PL A++ +D D II + E I VG Sbjct: 10 GVRLGVDVGTVRVGVAVCDPDGILATPLRAVQ-RDAKRNSDLRIIVKEALERDAITIYVG 68 Query: 61 LPLNMDGTEQPLTARARKFANR-----IHGRFGVEVKLHDERLSTVEARSGLFEQGGYRA 115 LP + GTE AR A + + EV+L DERLS+V A L G Sbjct: 69 LPQTLRGTESGSAELARAIAGQLADLLVQSDSAAEVRLIDERLSSVSAHQQLRSAGMAGR 128 Query: 116 LNKGKVDSASAVIILESYFE 135 + +D +A IL+ E Sbjct: 129 EQRKVIDQVAAAGILQHALE 148 >UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCJ6_9ACTO Length = 162 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 10/131 (7%) Query: 15 IGVAVGQRITGTARPLP------AIKAQDGTPDWNIIERL---LKEWQPDEIIVGLPLNM 65 IGV VG G +R P ++ PD + ++RL ++ + E+IVGLP ++ Sbjct: 9 IGVDVGTVRVGVSRCDPDGILTMPVETLHRAPDLSDLDRLADIVRSYDAIEVIVGLPRHL 68 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G E ARK+A R+ V V + DER+++ +A + L G ++ +D Sbjct: 69 RGGEGISAKGARKYARRLKKLVPDVRVAMVDERMTSNQAHARLRASGIPEIEHRSVIDQV 128 Query: 125 SAVIILESYFE 135 +A IILE E Sbjct: 129 AAQIILEQALE 139 >UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Candidatus Pelagibacter RepID=RUVX_PELUB Length = 151 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 8/131 (6%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D G+K IGV++ A P I + + ++ ++K+ IIVG P+N Sbjct: 17 FIGLDLGSKRIGVSICDERQSIATPFKTINKTNTNELIDELKIIIKDNNIGGIIVGNPVN 76 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK---- 120 MDG+ A+ I + V L DERLSTV G F +N K Sbjct: 77 MDGSLGRSAQSVNDVASNISKSIDLPVILWDERLSTV----GAFNLSSLLDVNVSKRVKT 132 Query: 121 VDSASAVIILE 131 +D +A IL+ Sbjct: 133 IDQNAAAFILQ 143 >UniRef50_A6LJS1 Holliday junction resolvase YqgF n=2 Tax=Thermosipho RepID=A6LJS1_THEM4 Length = 202 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 13/96 (13%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K G A+G A+ GT + ++ LL +Q +I++GLPL+ Sbjct: 2 ILALDYGEKKTGYAIGNEFI----------AKSGTIKTSELKNLL--FQFKKIVLGLPLS 49 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST 100 M G + + KFA ++ + G+ V L DERL+T Sbjct: 50 MSGNYSTQSYKVLKFAFKLK-KMGLNVFLIDERLTT 84 >UniRef50_A9BF14 Holliday junction resolvase YqgF n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BF14_PETMO Length = 230 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 9/129 (6%) Query: 9 DFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERL--LKEWQPDEIIVGLPLNMD 66 D+GT + G+A+ ++ P IK++ ++E L L D I+ GLP++M Sbjct: 13 DYGTSNCGIAILKQDVNIPLPKETIKSE------KLLEFLVSLDLSHDDLIVFGLPISMS 66 Query: 67 GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASA 126 G + + A +I + G ++ DERL+T S + Q Y+ + + K D S+ Sbjct: 67 GRYSKQSFLSIDEAIKIKEKIGCKIYFVDERLTTSSLYSEVRGQVSYKKVKRTK-DQNSS 125 Query: 127 VIILESYFE 135 V+IL ++ + Sbjct: 126 VLILSNFIQ 134 >UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYT3_ACIFD Length = 138 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D GTK IGVAV + A PL I A+ P + L+ ++VGLP Sbjct: 7 GRALGVDLGTKRIGVAVAE--GSLALPLEVIDARG--PWRARLAELVASVGASVVVVGLP 62 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + +DG+E AR R+++ + V V DERLS+ A L G +G VD Sbjct: 63 IGLDGSEGRAAARVRQWSEGLAEHLEVPVVFVDERLSSQAAERRLGAAGVDARSRRGAVD 122 Query: 123 SASAVIILESYF 134 + +A ILE + Sbjct: 123 AFAATEILERWL 134 >UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bifidobacterium RepID=RUVX_BIFAA Length = 151 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 40/148 (27%), Positives = 72/148 (48%), Gaps = 18/148 (12%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L D G +G+A+ A P+ I+ D + + ++ + D +++GLPL Sbjct: 4 LGIDLGDARVGLALSDPELTLAHPIGNIQVYGDSFRALDEVIDVIGDESVDHVVIGLPLL 63 Query: 65 MDGTEQPLTARARKFA----NRIHGRFGVE---------VKLHDERLSTVEARSGLFEQ- 110 ++G E +AR+++ R+H E ++L DERL+TV A LF+ Sbjct: 64 LNGEEGKSAKKARRWSVNLEKRLHAAVEDESYSVTRVPTIELVDERLTTVTAHHQLFDAR 123 Query: 111 -GGYRALNKGKVDSASAVIILESYFEQG 137 GG + ++ VD SAV+IL++ ++ Sbjct: 124 IGGRK--HRPMVDQQSAVVILQTALDRS 149 >UniRef50_A7H4H6 Putative Holliday junction resolvase n=21 Tax=Epsilonproteobacteria RepID=RUVX_CAMJD Length = 129 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 13/132 (9%) Query: 6 LAFDFGTKSIGVA--VGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 LA D G K IGVA V ++I A PL A+ ++ N I+ LLK + +IVG+P Sbjct: 4 LALDIGLKRIGVALCVDKKI---ALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIP- 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK-GKVD 122 +E+ +T R + F + + F E+ DE ++ +A E G K GK+D Sbjct: 60 KGGSSEEEMTRRIKHFVSLLE--FDKEICFVDESGTSKKA----LEYGIANTRKKDGKLD 113 Query: 123 SASAVIILESYF 134 S +A I+++ YF Sbjct: 114 SLAAFIMIKDYF 125 >UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0S1_9FIRM Length = 139 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 3/134 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGLP 62 +L D G+++ G+A+ + A L + DG N + ++ + Q +++GLP Sbjct: 4 ILGLDLGSRTCGIAMSDALGMLAHGLETYRFNDGNYKQAANYVVEIINKNQIKTVVLGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 +M+G + F + + G+ V L DERL+T A+ L R K + Sbjct: 64 KHMNGDLGERAQISIMFKEMLEKKVAGLNVVLVDERLTTKVAQDRLIFADVSRKKRKQVI 123 Query: 122 DSASAVIILESYFE 135 D +AV IL+ Y + Sbjct: 124 DKMAAVAILQGYLD 137 >UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XG67_MEIRU Length = 136 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 1/130 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D G IG+AVG+ + A + ++ D + + + + +VGLPL Sbjct: 3 VVALDVGEARIGLAVGEIGSPWAFGRGYLVRKNLEADLEALAAFAERERAERFVVGLPLR 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG R + + R G++++L DER +T ++ L KGK+D A Sbjct: 63 TDGRPSAQAERVQALVEAMRER-GMQLELLDERYTTKLGQNRLKHAPKRIRQEKGKLDEA 121 Query: 125 SAVIILESYF 134 +A+ +LESY Sbjct: 122 AAIALLESYL 131 >UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Actinomycetales RepID=RUVX_KINRD Length = 188 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPD--EIIVG 60 G LA D G+ +G+A A P+ + +D D ++ E + EI++G Sbjct: 4 GVRLAVDVGSVRVGLAACDPAGVIASPVRTL-VRDPGHDADVAEIAAEARARGAVEIVLG 62 Query: 61 LPLNMDGTEQPLTARARKFANRI-HGRFGVEVKLHDERLSTVEARSGLFEQG 111 LPL++DG+E P RA +A++I V V+L DERLSTV A L G Sbjct: 63 LPLSLDGSEGPAALRALDYADKIVRSVPEVPVRLVDERLSTVGAHRALHAAG 114 >UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0Z6_9DELT Length = 152 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 56/133 (42%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G +G+AV A P + Q + + ++ I+VG P Sbjct: 4 ILAIDYGQARVGLAVSDPEGRMAFPFATVAWQTRDALFRELLDVITSQGIAAIVVGYPAR 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G E + RKF R+ R + + L DE ST EA L E G +VD+ Sbjct: 64 AGGDESLTGRQVRKFVARLSRRTDLPIVLVDEAHSTEEAAEQLREAGLSGPALSARVDAQ 123 Query: 125 SAVIILESYFEQG 137 +A +IL Y G Sbjct: 124 AAAVILTRYLRGG 136 >UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC39_PLALI Length = 199 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 1/117 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+G K +G+A+ A P+ + + + D + +++ ++VGLP Sbjct: 27 GCLLGVDYGQKRVGLAISTFEQTLAMPMEIYQRKSESVDREWFKATCLDYRVAGLVVGLP 86 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNK 118 L+ G E L+ R+F + + ++ DER ++V A +++ G + R+ NK Sbjct: 87 LHTSGEESELSREVRQFGEWLARCTNLPLRFWDERYTSVSAELLMWQDGVFPRSGNK 143 >UniRef50_Q1CUG7 Putative Holliday junction resolvase n=12 Tax=Helicobacter pylori RepID=RUVX_HELPH Length = 134 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 10/135 (7%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G K IG+A + G PL AI Q+ + LL+E ++VG P Sbjct: 2 ILACDVGLKRIGIAA--LLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKP-- 57 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGG---YRALNKGKV 121 + + AR F + F E+ +E S++EA L G + A+ G++ Sbjct: 58 -NESYADTNARIEHFIKLVD--FKGEIVFINEDNSSIEAYENLEHLGKKNKWLAIKDGRL 114 Query: 122 DSASAVIILESYFEQ 136 DS SA ILE Y +Q Sbjct: 115 DSLSACRILERYCQQ 129 >UniRef50_A8F455 Holliday junction resolvase YqgF n=1 Tax=Thermotoga lettingae TMO RepID=A8F455_THELT Length = 214 Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 21/129 (16%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A D+G G+A+G+++ AR + ++ + + + I + + +VGLPL+ Sbjct: 2 IVAVDYGDARCGLAIGEKL---ARKIMTVEKKKVISEISRIPFI------NCFVVGLPLS 52 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M G T +A +FA +++ RF V L DERL+ S +F+ N+ +D Sbjct: 53 MSGRYSQQTFKAIEFAEKLNRRFKKRVYLIDERLT-----SSIFK-------NRENIDGL 100 Query: 125 SAVIILESY 133 A I E + Sbjct: 101 CAAEIFEKF 109 >UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Chlamydiaceae RepID=RUVX_CHLFF Length = 150 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 3/134 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+G + IG+A + P+ I+A + + +++ E + +++G P+ Sbjct: 10 FLGVDYGQRRIGLAYAASPLFISLPIGFIEAGKTLEATAQSLAKIILEREVSCVVLGNPI 69 Query: 64 NMD-GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL-FEQGGYRALNKGKV 121 M G + L K ++ I V+V L DERLS+ +A L + G R KGK Sbjct: 70 PMQIGQKSSLQEEILKISSLIQEFCHVDVVLWDERLSSAQAERMLKCDCGLSRKQRKGKT 129 Query: 122 DSASAVIILESYFE 135 DS +A +IL ++ E Sbjct: 130 DSVAATLILTNFLE 143 >UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVX_AZOPC Length = 138 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 8/137 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K G A+ + + ++ ++ + + + ++G P Sbjct: 2 GRIVAIDYGEKRTGFAISDPLKMIVSSFVTVLSRKAV---MYLKNCTENYDIELFVLGEP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRAL---NK 118 MD T R KF + ++V++ DER ++V A + E GG + + +K Sbjct: 59 RQMDYTPSENMPRVEKFKRNLRRVIPSIDVQMVDERFTSVLAHRIMIE-GGVKKIKRQDK 117 Query: 119 GKVDSASAVIILESYFE 135 G VD SA I+L++Y E Sbjct: 118 GLVDRLSAAILLQTYLE 134 >UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9W8_9SPIR Length = 141 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 2/130 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A PL I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGVDFGRKKTGTAFMDMNIKIPFPLLLIEESNAKKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E + R+F++ + V V DE ++ EA L +G + + K D Sbjct: 62 DEGKESEWCSEIRRFSDFLLKSVKVNVVFVDEYGTSKEADYIL--RGRKKNVKKKANDLI 119 Query: 125 SAVIILESYF 134 +A +ILE+Y Sbjct: 120 AAALILENYL 129 >UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma penetrans RepID=RUVX_MYCPE Length = 142 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 5/137 (3%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 ++ +LA DFGTK IG A+ LP + + + I +++E EI++G Sbjct: 4 LNSKILAIDFGTKIIGTAIND--INLNLCLPYCEITNNELKFKKILEIVEEENIKEIVIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 P + F N++ +E+ DE ST ++ L + Sbjct: 62 FPKTQNSYVSERHQLIIDFKNQLSELLKNKNIEICFFDESYSTKSSKESLMNFNVKTSKL 121 Query: 118 KGKVDSASAVIILESYF 134 K D +A IILE+Y Sbjct: 122 KKNKDMIAASIILENYL 138 >UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Salinibacter ruber DSM 13855 RepID=RUVX_SALRD Length = 143 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 14/139 (10%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PD--WNIIERLLKEWQPDEIIVG 60 ++ D GTK +GVAV A PL GT PD ++++ L I+VG Sbjct: 10 VVGIDVGTKRVGVAV-------ADPLRLFAQPHGTYAPDEALDVLQALRDADGIARIVVG 62 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRA--LN 117 PL +GT + T + RI G VEV DER ++ A+ L E G + + Sbjct: 63 WPLTEEGTAEEATEMVEAYVERIREALGTVEVAREDERYTSEIAKDLLREAGVSQPGRYD 122 Query: 118 KGKVDSASAVIILESYFEQ 136 KG+VD+A+A +IL+ + + Sbjct: 123 KGRVDAAAAAVILQGFLNR 141 >UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIY6_FIBSS Length = 134 Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D+G +GVA G A I Q T + +++L++ + DE +VG+P + Sbjct: 1 MALDYGEHRVGVAFGDSELKMAFSRETID-QKTTNLFERLDQLVRLNKIDEFVVGMPYHP 59 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGL-FEQGGYRALNKGKVDS 123 DG + F + RF G+++ DE S+V+A+ + + NK +D Sbjct: 60 DGRKDGKNVVVEAFIKDLTLRFPGMKIHTQDESYSSVQAQEFTSYMSKKKKQKNKAIIDR 119 Query: 124 ASAVIILESYFEQ 136 +A IIL+ +F++ Sbjct: 120 TAAAIILQRWFDE 132 >UniRef50_UPI00019786D3 Holliday junction resolvase-like protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019786D3 Length = 140 Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 7/134 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G K IG+AV Q G P+ I ++ + +LK + + ++VGLP Sbjct: 6 ILACDVGLKRIGLAVTQ--LGIILPIEPIIRKNRNQASKELSEILKTREIEILVVGLPSG 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA-RSGLFE--QGGYRALNKGKV 121 + R F + FG E+ DE +++EA +S + Q + G++ Sbjct: 64 GEAGHSDTRKRILHFVGLVA--FGGEIAYIDEDYTSLEALQSSAYMGVQNRLKIQKDGRL 121 Query: 122 DSASAVIILESYFE 135 DS SA +ILE + E Sbjct: 122 DSLSATLILERFLE 135 >UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=cellular organisms RepID=RUVX_SYNS9 Length = 164 Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L+ D G K IG+A + T PLPA+ D ++ + ++VGLPL Sbjct: 13 SVLSLDVGRKRIGLAGCDPLGITVSPLPALHRGRFDNDLLVLRHHCQTRSVQGLVVGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G R++ R+ G+ + +E ST A E+ G + G++DS Sbjct: 73 DAAGQPTAQAEHCRRYGVRLAQSLGLPLAWVNEHSSTWAA----GERHGLQGDRTGRLDS 128 Query: 124 ASAVIILESYFEQG 137 A+A ++LE + + G Sbjct: 129 AAAALLLEQWLQDG 142 >UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Bacteria RepID=RUVX_PARD8 Length = 140 Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 14/140 (10%) Query: 3 GTLLAFDFGTKSIGVA---VGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQP-DEII 58 G ++A D+G K G+A + Q I +P+ + D+ I R +P D + Sbjct: 2 GRIIAIDYGRKRTGIAATDILQMIANGVATVPSGEVVKYLSDY--ISR-----EPVDLFV 54 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQG--GYRA 115 VGL M+ F + + V +DER ++V A + E G + Sbjct: 55 VGLRKQMNNEPSENMKYVEAFVTHLKRTIPSIPVTYYDERFTSVLAHKAMLEGGLKKKKR 114 Query: 116 LNKGKVDSASAVIILESYFE 135 +KG VD SAVIIL++Y E Sbjct: 115 QDKGLVDEISAVIILQAYLE 134 >UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Mycoplasma mobile RepID=RUVX_MYCMO Length = 144 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 4/135 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIE--RLLKEWQPDEIIVGLPL 63 L D G G A+ + PL ++ + I+E ++L E+Q D I++GLP+ Sbjct: 4 LGIDLGKIRTGFAISDDSNKISLPLKTFIQKNANFNNIILEIKKILLEYQIDTIVIGLPI 63 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ + T F + + + +E S+V A + E + K VD Sbjct: 64 KINNEKTKSTIFVENFKKHLEKEINLPIFFVNEYNSSVLANLSINEMKSKKR--KTIVDK 121 Query: 124 ASAVIILESYFEQGY 138 SA IIL + + Sbjct: 122 ISAQIILNDFLNNYF 136 >UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ureaplasma RepID=RUVX_UREP2 Length = 147 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 9/142 (6%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAI--KAQDGTPDWNIIERLLKEWQP--DEIIVGL 61 LA D GTKS G A+ + A L + D T I+ ++ + D I++G Sbjct: 4 LALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVLGY 63 Query: 62 PLNM-DGTEQPLTARARKFANRIHGRF----GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P N+ DG++ T F + F +++ DER ST A L A Sbjct: 64 PTNVYDGSKNERTYLIESFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKAAK 123 Query: 117 NKGKVDSASAVIILESYFEQGY 138 K D SAV+ILESY + + Sbjct: 124 IKKVKDKMSAVVILESYLSKNH 145 >UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Actinomycetales RepID=RUVX_MYCBP Length = 170 Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 7/138 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G IGVA A P+ ++ + L E + E+IVGLP Sbjct: 22 GRRLGIDVGAARIGVACSDPDAILATPVETVRRDRSGKHLRRLAALAAELEAVEVIVGLP 81 Query: 63 LNMDG----TEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 + + Q A A R+ V+L DERL+TV A+ L + G + + Sbjct: 82 RTLADRIGRSAQDAIELAEALARRVS---PTPVRLADERLTTVSAQRSLRQAGVRASEQR 138 Query: 119 GKVDSASAVIILESYFEQ 136 +D A+AV IL+S+ ++ Sbjct: 139 AVIDQAAAVAILQSWLDE 156 >UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Micrococcineae RepID=D1BSM1_XYLCX Length = 184 Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust. Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 6/139 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGT----PDWNIIERLLKEWQPDEI 57 G L D G IG+A A P+ + + D T D I + E + Sbjct: 29 GARLGVDVGKARIGLAASDPDGLIATPVETVARVLDATGTDSADVRAIAEAVGERFAAVV 88 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 VGLP ++ G E TA AR FA R+ V V++ DER+STV A S L G Sbjct: 89 YVGLPRHLSGKEGAATADARAFATRLALAVAPVPVRMVDERMSTVTATSQLRAAGKKSKS 148 Query: 117 NKGKVDSASAVIILESYFE 135 ++ +D A+AVIIL+S + Sbjct: 149 HRPVIDQAAAVIILQSALD 167 >UniRef50_C3XGU4 Putative uncharacterized protein (Fragment) n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGU4_9HELI Length = 160 Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 65/162 (40%), Gaps = 34/162 (20%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPD----EIIVG 60 + DFG K +GVA + + PL I ++ + LL + D ++VG Sbjct: 3 IFGIDFGLKRLGVA--KVVQNIIVPLAPIMRKNRNQASKDLANLLLAHESDMSKITLVVG 60 Query: 61 LPLNMD-----------------------GTEQPLTARARKFANRIHGRFGVEVKLHDER 97 +P +MD G + + R F N I F +V DE Sbjct: 61 MPRDMDIDDVDTESNLNIESGLDIESNRAGRHEVMQKRISHFLNLID--FSGQVIYIDES 118 Query: 98 LSTVEARSGLFEQGGYRALN---KGKVDSASAVIILESYFEQ 136 S+ EA L ++G + N G +DS SA +ILE Y E+ Sbjct: 119 YSSKEANERLLDRGYNKRKNARKNGVLDSISACVILERYLER 160 >UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Mycoplasma synoviae 53 RepID=RUVX_MYCS5 Length = 137 Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust. Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 3/132 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIVGLPL 63 L DFG IG A+ + L DG+ + I I+ L E++ D+ I+G PL Sbjct: 4 LGIDFGLSRIGFAISDESNSFSLALENFDY-DGSYEKIIQKIQLFLDEYKIDKFIIGYPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 N G + +F + F ++KL +E S+ +A L + K K D Sbjct: 63 NSRGEKTKTCLLIDEFIIHLEKNFDQKIKLINESYSSRKASEILHQANIKNKKQKDKKDM 122 Query: 124 ASAVIILESYFE 135 +A IIL+ Y + Sbjct: 123 LAAKIILQDYLD 134 >UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4E9_JONDD Length = 167 Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 16/148 (10%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--------------PDWNIIERL 48 G L D G +GVA T A P+ + A+D + D + + Sbjct: 7 GVRLGVDVGQVRVGVAACDPDTILATPVETL-ARDRSVSYVAGGKVPSVLPTDIEDLREI 65 Query: 49 LKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGL 107 +E + VGLP ++ G A +A+ + +EV+L DERL++ A S L Sbjct: 66 AEERLAVAVYVGLPKHLSGARGVSAEMAVNYASLVQRVLPHLEVRLVDERLTSKTAHSAL 125 Query: 108 FEQGGYRALNKGKVDSASAVIILESYFE 135 + G ++ +D A+AV+IL++ E Sbjct: 126 HDAGRRAREHRTVIDQAAAVVILDTALE 153 >UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZA0_BRAHW Length = 139 Score = 41.6 bits (96), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 2/130 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A P I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGIDFGRKKTGTAFMDMDIKIPFPCRLIEESNARKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E A R+F+ + V++ DE ++ EA L +G + + D Sbjct: 62 DEGKESDWCAEIRRFSEFLLKSVKVDIVFVDEYGTSKEADFIL--RGKKKKVKNKANDLI 119 Query: 125 SAVIILESYF 134 +A +ILE+Y Sbjct: 120 AATLILENYL 129 >UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LQC7_PICSI Length = 178 Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 5/139 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD--WNIIERLLKEWQPDEIIV 59 +G LL D G + +G+AV + A P + + D + ++ L++ + ++ Sbjct: 21 TGRLLGMDVGDRYVGLAVSNHLNEIASPHSVLIRKQSNIDSITDKLQELVRRFSLVGFVI 80 Query: 60 GLPLNMDGTEQPLTARARKFANRIH--GRFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 G PL + ++ + + F ++ GRFG + DERL+T S L + Sbjct: 81 GYPLPLYHFQRSQAMQVKMFVEQLQKTGRFGCLNYTYWDERLTTRAVESMLKPLKIHPLQ 140 Query: 117 NKGKVDSASAVIILESYFE 135 K +D +AV IL+ + + Sbjct: 141 MKHMMDKFAAVGILQDFLD 159 >UniRef50_A4S7X0 Predicted protein n=2 Tax=Ostreococcus RepID=A4S7X0_OSTLU Length = 202 Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/156 (26%), Positives = 63/156 (40%), Gaps = 27/156 (17%) Query: 6 LAFDFGTKSIGVAVGQRITGTA-RPLPAIKAQDGTPDWNIIERLLK---EWQPDEIIVGL 61 L D+G + +G+AV G A RPL + + + +L E D I+VG+ Sbjct: 40 LGVDYGARRVGLAVSN--GGAAPRPLRTLTHSGTATTTSTVRAILDVALEECCDRIVVGI 97 Query: 62 PLNMDGTEQPLTARARKFA--NRIHGRFGVEVK-----------------LHDERLSTVE 102 P+ + R R + + RF EV +DE ++ E Sbjct: 98 PVPPGRAAKDRRGRGRGAVQMHAVCARFAGEVADACARSTNAETKALVVYTYDESRTSKE 157 Query: 103 ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY 138 A + GG G +DSASA I+LE YF+ Y Sbjct: 158 ASERIATSGGSN--ENGALDSASAAILLERYFDGSY 191 >UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Actinomycetales RepID=RUVX_MYCA9 Length = 166 Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 5/80 (6%) Query: 60 GLPLNM-DGTEQPLTAR-ARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 GLP N+ +GT +AR A FA + R V V+L DER +T A+ L E G Sbjct: 78 GLPRNLREGTGS--SARDAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQ 135 Query: 117 NKGKVDSASAVIILESYFEQ 136 +G +D A+AV IL+ + EQ Sbjct: 136 QRGIIDQAAAVAILQDWLEQ 155 >UniRef50_UPI00016999DE hypothetical protein Epers_02645 n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI00016999DE Length = 57 Score = 40.4 bits (93), Expect = 0.016, Method: Compositional matrix adjust. Identities = 18/24 (75%), Positives = 21/24 (87%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTA 27 TLL FDFGT+ IGVAVGQ ++GTA Sbjct: 2 TLLGFDFGTRKIGVAVGQTVSGTA 25 >UniRef50_Q47N67 Putative Holliday junction resolvase n=10 Tax=Actinobacteria (class) RepID=RUVX_THEFY Length = 159 Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust. Identities = 46/142 (32%), Positives = 66/142 (46%), Gaps = 10/142 (7%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G LA D G IGVA A P+ I+ G D + I L+ E++ E+IVG Sbjct: 3 TGVRLAVDPGAARIGVARSDPDGILAIPVETIRRGPG--DLDRIAALVLEYEAREVIVGY 60 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P ++ G E AR FA + R V V+L DERL+TV A L YR Sbjct: 61 PASLSGAEGRAARAARAFAKALARRLAPVPVRLVDERLTTVTAELHLRTGASYRKRGARG 120 Query: 121 -------VDSASAVIILESYFE 135 +D A+A ++L++ + Sbjct: 121 GRARRSVIDQAAATVLLQNALD 142 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Nei... 191 6e-48 UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=G... 190 9e-48 UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostri... 185 3e-46 UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betapro... 185 5e-46 UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=G... 184 8e-46 UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Ga... 184 8e-46 UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clo... 182 4e-45 UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax... 180 1e-44 UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myx... 180 1e-44 UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gam... 179 2e-44 UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Be... 178 6e-44 UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Fi... 177 7e-44 UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiel... 177 8e-44 UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Bet... 177 8e-44 UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax... 177 1e-43 UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickett... 177 1e-43 UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Plancto... 176 2e-43 UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Ps... 176 2e-43 UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Ga... 176 2e-43 UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein ... 176 2e-43 UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitroso... 175 3e-43 UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Pep... 175 3e-43 UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Bet... 175 5e-43 UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Aci... 174 8e-43 UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredin... 173 1e-42 UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Nat... 173 1e-42 UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Bu... 173 1e-42 UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nit... 173 2e-42 UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=B... 172 3e-42 UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syn... 172 3e-42 UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallion... 172 3e-42 UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonucl... 171 5e-42 UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonucl... 170 9e-42 UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verruco... 170 1e-41 UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostri... 170 1e-41 UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=La... 169 3e-41 UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alp... 169 3e-41 UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=... 169 3e-41 UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Cl... 168 4e-41 UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thi... 168 4e-41 UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma p... 168 6e-41 UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betapro... 167 8e-41 UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteri... 167 9e-41 UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha p... 167 9e-41 UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacteri... 167 1e-40 UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphi... 167 1e-40 UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chl... 167 2e-40 UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Fi... 166 2e-40 UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerof... 166 2e-40 UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpeto... 165 3e-40 UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Glo... 165 3e-40 UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicycl... 165 4e-40 UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermom... 165 4e-40 UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax... 165 4e-40 UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma p... 165 4e-40 UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Ta... 164 7e-40 UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Cox... 164 9e-40 UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax... 164 9e-40 UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alc... 164 9e-40 UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomo... 164 1e-39 UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Ga... 163 1e-39 UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Ent... 163 2e-39 UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=unc... 163 2e-39 UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bactero... 162 2e-39 UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidoba... 162 3e-39 UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zym... 162 3e-39 UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidith... 162 4e-39 UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cy... 162 5e-39 UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Al... 162 5e-39 UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alp... 161 7e-39 UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax... 161 8e-39 UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothi... 161 8e-39 UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=The... 161 8e-39 UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter ... 160 9e-39 UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thi... 160 9e-39 UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Myc... 160 1e-38 UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Ana... 160 1e-38 UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothr... 160 1e-38 UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellu... 160 2e-38 UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gam... 160 2e-38 UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rho... 159 2e-38 UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothi... 159 2e-38 UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Al... 158 4e-38 UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sph... 158 4e-38 UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dic... 158 5e-38 UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Cor... 158 5e-38 UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alp... 158 6e-38 UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 157 7e-38 UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candida... 157 8e-38 UniRef50_C5JAL6 Resolvase family protein, holliday junction-type... 157 9e-38 UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Fi... 157 1e-37 UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Can... 157 1e-37 UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonif... 157 1e-37 UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobactera... 157 1e-37 UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastop... 156 2e-37 UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Ent... 155 4e-37 UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Ba... 155 5e-37 UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachl... 154 6e-37 UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Can... 154 7e-37 UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Syn... 154 8e-37 UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermob... 154 9e-37 UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Act... 154 1e-36 UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Corioba... 153 1e-36 UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostri... 153 2e-36 UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Sla... 152 2e-36 UniRef50_UPI000050F766 Holliday junction resolvase-like protein ... 152 4e-36 UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfo... 152 4e-36 UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Myc... 152 4e-36 UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 152 5e-36 UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Ba... 152 5e-36 UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9... 151 6e-36 UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkerma... 151 7e-36 UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethios... 150 1e-35 UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Can... 150 1e-35 UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydro... 150 2e-35 UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Act... 150 2e-35 UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Ac... 149 2e-35 UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bor... 149 2e-35 UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hyd... 149 2e-35 UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Des... 149 3e-35 UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Therman... 149 3e-35 UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Cla... 148 6e-35 UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sph... 148 7e-35 UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Ana... 148 7e-35 UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protei... 147 8e-35 UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Pol... 147 8e-35 UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chl... 147 9e-35 UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavoba... 147 9e-35 UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttle... 147 9e-35 UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Act... 147 9e-35 UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax... 147 1e-34 UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyp... 147 1e-34 UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostri... 147 2e-34 UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Pro... 147 2e-34 UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomon... 145 3e-34 UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteri... 145 4e-34 UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Ori... 145 4e-34 UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Al... 145 5e-34 UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Ri... 145 5e-34 UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dic... 144 7e-34 UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Aci... 144 7e-34 UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bif... 144 7e-34 UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Fr... 144 8e-34 UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Can... 144 1e-33 UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT 144 1e-33 UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mob... 144 1e-33 UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eub... 143 1e-33 UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Met... 143 1e-33 UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Ba... 143 1e-33 UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xa... 143 2e-33 UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 143 2e-33 UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clo... 142 3e-33 UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Ba... 142 3e-33 UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Koc... 142 3e-33 UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Ac... 142 3e-33 UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Can... 142 3e-33 UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Ace... 142 3e-33 UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Sub... 142 4e-33 UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Myc... 142 4e-33 UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha p... 142 4e-33 UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodoth... 142 4e-33 UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Bu... 142 5e-33 UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Des... 141 6e-33 UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gem... 141 6e-33 UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta pr... 141 7e-33 UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 141 9e-33 UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Des... 141 9e-33 UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrob... 140 9e-33 UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wol... 140 1e-32 UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Maripro... 140 1e-32 UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verruco... 140 2e-32 UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax... 140 2e-32 UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax... 139 2e-32 UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens ... 139 3e-32 UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Can... 138 4e-32 UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mol... 138 5e-32 UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibact... 138 6e-32 UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Plancto... 138 7e-32 UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecali... 138 7e-32 UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betapro... 137 9e-32 UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinom... 137 1e-31 UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psy... 137 1e-31 UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococ... 137 1e-31 UniRef50_D2NT33 Predicted endonuclease involved in recombination... 136 1e-31 UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax... 136 2e-31 UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chl... 136 2e-31 UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibac... 135 5e-31 UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Myc... 134 7e-31 UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Ac... 133 1e-30 UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacter... 133 2e-30 UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bi... 132 3e-30 UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Ach... 132 3e-30 UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Myc... 132 4e-30 UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mob... 131 5e-30 UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opi... 131 6e-30 UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Myc... 130 1e-29 UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Deh... 129 2e-29 UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax... 129 3e-29 UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candida... 128 4e-29 UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=... 128 4e-29 UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachys... 128 6e-29 UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Myc... 128 6e-29 UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR 128 7e-29 UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Pro... 126 2e-28 UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrich... 126 3e-28 UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylo... 126 3e-28 UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aqu... 125 4e-28 UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1... 125 6e-28 UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, s... 124 8e-28 UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Myc... 124 9e-28 UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=The... 124 9e-28 UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Ch... 123 2e-27 UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collins... 122 3e-27 UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylo... 121 5e-27 UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV1... 121 8e-27 UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax... 121 9e-27 UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelo... 121 9e-27 UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimi... 120 1e-26 UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coproth... 120 2e-26 UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Cam... 119 2e-26 UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ur... 118 5e-26 UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Sal... 118 7e-26 UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothe... 118 8e-26 UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylo... 117 1e-25 UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Myc... 116 2e-25 UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibroba... 116 3e-25 UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitre... 115 5e-25 UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tro... 115 5e-25 UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=ce... 114 1e-24 UniRef50_UPI00019786D3 Holliday junction resolvase-like protein ... 112 4e-24 UniRef50_A7H4H6 Putative Holliday junction resolvase n=21 Tax=Ep... 109 3e-23 UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Act... 109 3e-23 UniRef50_A9F903 Putative Hollyday junction resolvase n=1 Tax=Sor... 106 3e-22 Sequences not found previously or not previously below threshold: UniRef50_D1AX73 Holliday junction resolvase YqgF n=1 Tax=Strepto... 138 6e-32 UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Act... 133 2e-30 UniRef50_B3ETT5 Putative Holliday junction resolvase n=1 Tax=Can... 132 3e-30 UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia... 129 3e-29 UniRef50_B8ZUJ7 Putative Holliday junction resolvase n=16 Tax=Ac... 128 5e-29 UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Microco... 127 9e-29 UniRef50_C6X127 Putative Holliday junction resolvase n=1 Tax=Fla... 124 9e-28 UniRef50_C8XD23 Holliday junction resolvase YqgF n=2 Tax=Actinom... 121 7e-27 UniRef50_D0J8Y2 Holliday junction resolvase-like protein n=2 Tax... 120 2e-26 UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea s... 118 5e-26 UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira ... 115 6e-25 UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Myc... 111 6e-24 UniRef50_Q7V847 Putative Holliday junction resolvase n=3 Tax=Cya... 110 2e-23 UniRef50_Q7VGU1 Putative Holliday junction resolvase n=2 Tax=Hel... 110 2e-23 UniRef50_C6HU38 Holliday junction resolvase YqgF n=1 Tax=Leptosp... 110 2e-23 UniRef50_A3EWG0 Putative holliday junction resolvase YqgF n=2 Ta... 109 3e-23 UniRef50_D1IMS6 Whole genome shotgun sequence of line PN40024, s... 107 9e-23 >UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Neisseriaceae RepID=C1D4R9_LARHH Length = 155 Score = 191 bits (487), Expect = 6e-48, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 81/135 (60%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+ L FDFG IG+AVG R+ G A PL + A D + I L+ EWQ ++VGLP Sbjct: 5 GSWLGFDFGEARIGIAVGDRLVGIAHPLETLSAPDNDSRFARIAALIGEWQISGLVVGLP 64 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DGT +T AR+FA R+HGRFG+ V L DER S++ A L E G K +D Sbjct: 65 THADGTPHEMTRLARRFAQRLHGRFGLPVVLVDERHSSLLAEDLLRESGRRGRKQKPVLD 124 Query: 123 SASAVIILESYFEQG 137 +A +IL+S+F+QG Sbjct: 125 QVAAQVILQSFFDQG 139 >UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=Gammaproteobacteria RepID=RUVX_HAES1 Length = 141 Score = 190 bits (485), Expect = 9e-48, Method: Composition-based stats. Identities = 96/137 (70%), Positives = 115/137 (83%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 MS T+LAFDFGTKSIG AVGQ ITGTA+ LPA KAQDG PDW IE+ LK+WQP+ ++VG Sbjct: 1 MSITVLAFDFGTKSIGCAVGQSITGTAQALPAFKAQDGIPDWLKIEKCLKDWQPNIVVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPLNMDG+EQ LT ARKFANR++GRFGV+V+L DERL+T +AR +F++GGYRAL K K Sbjct: 61 LPLNMDGSEQDLTHLARKFANRLNGRFGVKVELQDERLTTKQARDEIFQRGGYRALKKEK 120 Query: 121 VDSASAVIILESYFEQG 137 VDS SA +ILES+FE G Sbjct: 121 VDSISACLILESWFENG 137 >UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostridiales RepID=C5RHH5_CLOCL Length = 135 Score = 185 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 66/133 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K+IGVAV + TA+ + I ++ D + E+ D I+VGLP Sbjct: 2 RVLGLDVGNKTIGVAVSDPLGFTAQGITTINRKNIKTDIETVVNYCNEYTVDTIVVGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P + + F ++ + +K+ DERL+TV A + E RA VD Sbjct: 62 NMNGTLGPQSEKVMAFVEKLKKNTDINIKMWDERLTTVAAHKAMLEADLSRAKRNKIVDK 121 Query: 124 ASAVIILESYFEQ 136 +A IL+ Y + Sbjct: 122 VAATYILQGYLDS 134 >UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betaproteobacteria RepID=C6WUE8_METML Length = 156 Score = 185 bits (470), Expect = 5e-46, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 86/135 (63%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SGT+LAFDFG + IG+AVG+ + +A PL I + + II +L+ EWQP ++VGL Sbjct: 17 SGTVLAFDFGERRIGIAVGEHLLASANPLMTIDNESNEIRFQIITKLVSEWQPRLLVVGL 76 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL++DG+E +T +KFA R++GRF + V L DER S+ EA L E G K + Sbjct: 77 PLSLDGSEHGVTQLCKKFARRLNGRFNLPVALIDERYSSAEASQLLNEAGIRGRAQKEML 136 Query: 122 DSASAVIILESYFEQ 136 D +A IL+SYF+Q Sbjct: 137 DQVAAQTILQSYFDQ 151 >UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=Gammaproteobacteria RepID=RUVX_PSEHT Length = 149 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 81/135 (60%), Positives = 107/135 (79%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FDFGTKSIG+A+GQ +TG+A L A+KAQDG P+W+ I + EWQPD ++VGLPL Sbjct: 13 TVMGFDFGTKSIGIAIGQELTGSASSLKAVKAQDGIPNWDDIAVQVNEWQPDLMVVGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGT Q +T +A+KFANR+H + + V+ DERL+T +A++ LFEQGGY+ L KGKVD+ Sbjct: 73 NMDGTAQEVTFKAKKFANRLHNHYAIPVETQDERLTTADAKARLFEQGGYKNLGKGKVDN 132 Query: 124 ASAVIILESYFEQGY 138 SAVIILES+FE Y Sbjct: 133 MSAVIILESFFETSY 147 >UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Gammaproteobacteria RepID=RUVX_LEGPL Length = 139 Score = 184 bits (468), Expect = 8e-46, Method: Composition-based stats. Identities = 72/136 (52%), Positives = 95/136 (69%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L FDFG K IGVAVGQR+T +A PL I+A+ G PDWN I++++ +W P +IVGL Sbjct: 3 RGVYLGFDFGYKRIGVAVGQRLTCSASPLSTIEAKAGIPDWNTIQKVITQWNPQALIVGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P +D E T+ AR+FA ++H +F + V L DERLSTVEAR LFEQGGYR + K +V Sbjct: 63 PTCIDDRELYTTSAARRFAKQLHKQFSLPVHLVDERLSTVEARGYLFEQGGYRQIKKAEV 122 Query: 122 DSASAVIILESYFEQG 137 DS +A +ILE + +Q Sbjct: 123 DSIAACVILEQWLQQS 138 >UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=RUVX_SYNWW Length = 141 Score = 182 bits (462), Expect = 4e-45, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 70/134 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A + TA+ ++ + D + ++ L +E+Q ++I++GLPL Sbjct: 2 RIMGLDLGEKRIGIAFSDPMGWTAQGHSILQRKGLKKDLSYLQELCQEFQVEKIVLGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P ++FA + + V DERLS+ A L E R K +D Sbjct: 62 NMNGTMGPKALETQEFARALQEALKIPVDFWDERLSSKSAERVLLEADLSRKRRKELIDK 121 Query: 124 ASAVIILESYFEQG 137 +AV IL++Y + G Sbjct: 122 IAAVHILQAYLDGG 135 >UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K449_HAMD5 Length = 145 Score = 180 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 87/133 (65%), Positives = 108/133 (81%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGTKSIGVA+GQ IT TARPL A K+++GTPDW IERLL EW PD ++VG PLN Sbjct: 6 IIAFDFGTKSIGVAIGQNITETARPLTACKSKNGTPDWIKIERLLSEWYPDLVVVGFPLN 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTEQP+T AR+F + ++ RFG++V HDERLST EAR+ LF++GGY+ALNK VD+ Sbjct: 66 MDGTEQPITESARQFGHALYRRFGIKVVFHDERLSTAEARAYLFDKGGYQALNKSSVDAT 125 Query: 125 SAVIILESYFEQG 137 SAVIILES+F Sbjct: 126 SAVIILESWFSSN 138 >UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myxococcales RepID=RUVX_MYXXD Length = 151 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 71/132 (53%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D GTK+IGVAV + TA+ + ++ D + + E + +++GLPL Sbjct: 2 RTMGLDLGTKTIGVAVSDGLGLTAQGITTVRRTSLKADLAALATVASEHEVTHVVLGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+E P +RKFA+ + GV V+L DERLSTV A L E RA + +D Sbjct: 62 NMDGSEGPRAEASRKFADTLAQSLGVTVELWDERLSTVAATRTLLEADVSRARRREVIDQ 121 Query: 124 ASAVIILESYFE 135 +A IL+ + + Sbjct: 122 VAAQFILQGWLD 133 >UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gammaproteobacteria RepID=RUVX_PSEPK Length = 141 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL FD+G+K IGVAVGQ ITG AR L +KAQ+G PDW +E+L+ EW+PD I+VGLPLN Sbjct: 7 LLGFDYGSKQIGVAVGQVITGQARELCTLKAQNGVPDWAQVEKLIAEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEAR-SGLFEQGGYRALNKGKVDS 123 MDGT ++ARA KFA R++GRF + V HDERL+T EA+ + G + VD+ Sbjct: 67 MDGTPSEMSARAEKFARRLNGRFNLPVHTHDERLTTFEAKGERMARGGQRGSYRDNPVDA 126 Query: 124 ASAVIILESYFE 135 +A ++L+ + E Sbjct: 127 IAAALLLQGWLE 138 >UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Betaproteobacteria RepID=RUVX_NEIMF Length = 151 Score = 178 bits (452), Expect = 6e-44, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 76/136 (55%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GT LAFDFG IGVA G G + PL + + I +L++EWQP +VGL Sbjct: 6 KGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDEKFAAIAKLVQEWQPRYFVVGL 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++ DGT+ +T +RKF R++GRF + V DERLS+V A S L E + K + Sbjct: 66 PVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERLSSVYAESLLSEAQVFGKKRKSVL 125 Query: 122 DSASAVIILESYFEQG 137 D +A IL +FE G Sbjct: 126 DQVAAQAILHGFFEGG 141 >UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Firmicutes RepID=RUVX_PELTS Length = 154 Score = 177 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGLP 62 ++ D G K IGVA+ + TA+ L I + I L++++ +I+VGLP Sbjct: 2 RIMGLDLGDKKIGVALSDPMGWTAQGLDVIAVKGPPEASVERISELVRQYGVGKIVVGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NM+G+ P RAR FA + G + V+L DER++T+EA L E RA + +D Sbjct: 62 RNMNGSFGPRAERARAFAGCLAGALNLPVELWDERMTTLEAEKLLIEADLSRARRRQVID 121 Query: 123 SASAVIILESYFEQG 137 +AV+IL+S+ + Sbjct: 122 KMAAVLILQSFLDSQ 136 >UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R793_KANKD Length = 145 Score = 177 bits (451), Expect = 8e-44, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 93/135 (68%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L FDFG K +GVA G R +++ L + + PDW +IE L++EW + +VGL Sbjct: 7 AQRYLCFDFGEKRLGVATGVRTQMSSQALTVLAVTNDQPDWKLIENLIREWNVEAFVVGL 66 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMD +EQ LT +ARKFANR+HGRFG+ LHDERLS+ E + L+E GGY+ L + + Sbjct: 67 PLNMDDSEQELTQKARKFANRLHGRFGLPTHLHDERLSSAEVKDYLYEIGGYKKLKQNPI 126 Query: 122 DSASAVIILESYFEQ 136 D+ +A +IL+S+FEQ Sbjct: 127 DAYAAELILKSFFEQ 141 >UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Betaproteobacteria RepID=RUVX_AZOSB Length = 156 Score = 177 bits (451), Expect = 8e-44, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GTLLAFDFG IGVAVG+ T A PL + + + II RLL EW+P ++VGL Sbjct: 15 RGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGL 74 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR-ALNKGK 120 P ++DG E L R R+FAN++HGRFG+ V L DERLS+ A L + G K Sbjct: 75 PGHLDGREHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQARKPV 134 Query: 121 VDSASAVIILESYFE 135 +D+ +A +IL+ + + Sbjct: 135 LDAVAAQLILQHFLD 149 >UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8B2_9ALTE Length = 140 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 94/133 (70%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++AFDFGT+ IGVAVGQ + G PL I A+DGTPDW +E+LL EW+PD ++VGLPL Sbjct: 8 RVMAFDFGTRRIGVAVGQEMLGRGEPLTMIAARDGTPDWTQLEKLLHEWRPDLVVVGLPL 67 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMD +E + RARKF R+HGRF V V++ DERL++ +A+ + GG R + +D Sbjct: 68 NMDDSENEMCVRARKFGKRLHGRFHVTVEMVDERLTSYQAKGEVMAAGGSRNYRRDGIDD 127 Query: 124 ASAVIILESYFEQ 136 +AV+ILE++F Q Sbjct: 128 RAAVLILETWFNQ 140 >UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PPF2_9COXI Length = 139 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 67/136 (49%), Positives = 87/136 (63%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + T++ FDFG K IGVA+GQ A+PL + + G W I +LLK W PD I+VG+ Sbjct: 4 TKTVIGFDFGLKYIGVAIGQTSPSLAQPLTNLSVKKGNLPWEEIAQLLKMWSPDVIVVGV 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P NMDGTEQP+T AR F + RF + V DERL+TVEARS LF GGY+AL K + Sbjct: 64 PFNMDGTEQPITREARNFLMELKNRFEIPVFPVDERLTTVEARSRLFALGGYKALKKKSI 123 Query: 122 DSASAVIILESYFEQG 137 DS +A +I+E + E Sbjct: 124 DSIAAQLIVEIWLENQ 139 >UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C393_9PLAN Length = 162 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 64/134 (47%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+GTK +G+A+ A PL Q D + ++ E++ ++VGLP Sbjct: 19 GRLLGLDYGTKRVGIAISTFEQNIASPLDNYNRQSLPQDQKHLLSIITEYRCKGLVVGLP 78 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E AR+F N + + V+ DER S+ A L R K +D Sbjct: 79 VHMSGDEGQKAKEARQFGNWVSQFAEIPVRYWDERYSSATAEEILVNLNMSRNKRKAYLD 138 Query: 123 SASAVIILESYFEQ 136 +A IIL+S+ + Sbjct: 139 KLAAQIILQSFLDS 152 >UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Pseudomonas RepID=RUVX_PSE14 Length = 146 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL D+GTK IGVAVGQ ITG AR L +KAQ+G PDW+ ++ L+ EW+PD I+VGLPLN Sbjct: 7 LLGIDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWDKVQALINEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEAR-SGLFEQGGYRALNKGKVDS 123 MDGT ++ARA KF+ +++GRFGV V HDERL+T EA+ + G + VD+ Sbjct: 67 MDGTPSDMSARAEKFSRKLNGRFGVTVYTHDERLTTFEAKGERMARGGQKGSYRNNPVDA 126 Query: 124 ASAVIILESYFEQ 136 +A ++L+ + ++ Sbjct: 127 IAAALLLQGWLDE 139 >UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Gammaproteobacteria RepID=RUVX_CHRSD Length = 148 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 69/130 (53%), Positives = 88/130 (67%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFDFGT+ IGVAVG + G+A L + A+DG PDW I LL+EWQPD ++VGLPLN Sbjct: 9 VLAFDFGTRRIGVAVGNEMLGSATALAPLPARDGIPDWQQIAALLEEWQPDLLVVGLPLN 68 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE ++ RARKF NR+HGRFG V++ DER ST A+ + G VD Sbjct: 69 MDGTESDMSRRARKFGNRLHGRFGKPVEVFDERGSTRAAKRIARDAGHRGNYRDDGVDGI 128 Query: 125 SAVIILESYF 134 +A +ILES+F Sbjct: 129 AAQLILESFF 138 >UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B46 Length = 148 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 80/133 (60%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFG K IGVA+G IT TA PL I+ + IIE LL EW+P ++VGLPLN Sbjct: 16 VIAFDFGEKKIGVAIGNSITKTAHPLETIRKVKKSERIEIIENLLNEWEPGIVVVGLPLN 75 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DGTE LT A+ FA +I RF V + + DER ++VEA+ L E +D Sbjct: 76 EDGTESRLTLLAQNFAKKIKNRFQVPIVMVDERYTSVEAKILLNENVKSIKKGNQVIDQV 135 Query: 125 SAVIILESYFEQG 137 +A IIL SYF++ Sbjct: 136 AAQIILGSYFDRS 148 >UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFS9_9PROT Length = 161 Score = 175 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 80/136 (58%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G++LAFDFG K +GVA+G G A PL I ++ + +I +L+ WQP +VG+P Sbjct: 21 GSILAFDFGKKRVGVAIGNTALGVAHPLITIDSEVTNKRFVMIAQLIDTWQPVLFVVGMP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L+ DG LT +++FA R+ GRF + V + DER ++ A + L E G K +D Sbjct: 81 LHSDGIVHELTQLSQRFARRLAGRFNIPVVMQDERYTSQIASTILREAGVVGREQKSVLD 140 Query: 123 SASAVIILESYFEQGY 138 +A IL+S+F++ Y Sbjct: 141 QIAAQQILQSFFDEQY 156 >UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL9_9FIRM Length = 147 Score = 175 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 69/134 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K IGVA+ A PL I+ ++ I L++++ +I+VGLP Sbjct: 3 RVLGLDVGEKWIGVAISDETFTIATPLETIERTSNKEAYDKIHDLIEKYDVKKIVVGLPK 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+ T P +KF+ ++ +F +E+ DER++T+ A+ L E R K VD Sbjct: 63 NMNNTLGPTCQMVQKFSEKLKNKFRLELVYVDERMTTLMAKDVLMEASVRRENRKKYVDK 122 Query: 124 ASAVIILESYFEQG 137 +A IL++Y + Sbjct: 123 IAAAFILKTYMDSS 136 >UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Betaproteobacteria RepID=RUVX_NITEC Length = 157 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 80/138 (57%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT+LAFDFG + IGVA+G+ A PL I P + I L++ WQP ++VG Sbjct: 17 LSGTVLAFDFGVRRIGVAIGEYELRLAHPLMTIDQAMTKPRFEKIAELIETWQPVLLVVG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 L ++ DG E +T ++FA R+ GRFG+ V + DER +T AR L E G + Sbjct: 77 LSVHADGAEHEITRLCQRFARRLEGRFGIPVVMEDERYTTAIARLTLEEVGITGRKQRPM 136 Query: 121 VDSASAVIILESYFEQGY 138 +D +A IL+++F+ + Sbjct: 137 LDQIAAQHILQTFFDSSH 154 >UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Acidobacteria RepID=RUVX_ACIBL Length = 153 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 75/134 (55%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA DFGT+ IG+AV + TA+ L + ++ D + ++++ + EI+VGLP Sbjct: 9 GRILALDFGTRRIGLAVSDPLGITAQGLQTLLRKNKRTDLAALRSVIEQNEIREIVVGLP 68 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L + G + T +AR+FA + F + V + DER ++VEA L E VD Sbjct: 69 LRLSGADSSSTEKAREFAAWLEKEFALPVHMWDERFTSVEANRVLRESEMSIKKRGEAVD 128 Query: 123 SASAVIILESYFEQ 136 SAV+IL+++ E+ Sbjct: 129 RLSAVLILQAFLER 142 >UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLK5_TERTT Length = 146 Score = 173 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 90/133 (67%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+LAFDFGT+SIGVAVGQ +T +A LP +KA+DG PDW +E+L +W+P+ ++VGLP+ Sbjct: 9 TILAFDFGTRSIGVAVGQTLTQSASELPTLKAKDGIPDWQQLEQLFSDWRPNLVVVGLPV 68 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+E +T RARKF NR++GRF V DERL+T A+ G VDS Sbjct: 69 NMDGSEMEMTRRARKFGNRLNGRFNQTVAFFDERLTTRAAKEEAAAHGHRGNYRAKPVDS 128 Query: 124 ASAVIILESYFEQ 136 +A +ILE + + Sbjct: 129 IAARLILEGWMSE 141 >UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVX_NATTJ Length = 141 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 69/134 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ FD G +IGVAV + TA+ IK Q D + +L++++Q ++IVGLP Sbjct: 2 RIMGFDLGEATIGVAVSDALQLTAQGKTVIKRQSLEKDIEQVTKLIEDYQVSKLIVGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+G+ + + F + + ++ DERL++ A L E R K +D Sbjct: 62 NMNGSLGQMADQIMDFIKSLEQEVDIPIETVDERLTSRMAEQTLLEADVSRKKRKQVIDK 121 Query: 124 ASAVIILESYFEQG 137 +AV IL++Y ++ Sbjct: 122 LAAVNILQTYLDRQ 135 >UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Burkholderiaceae RepID=RUVX_BURP8 Length = 151 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFD+G K IGVAVG +T +ARPL ++ ++ + + +L+ EW+PD ++VGLP+ Sbjct: 10 TLLAFDYGEKRIGVAVGNSLTRSARPLVVLQNRNREYRFEAVGKLIDEWKPDALVVGLPM 69 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DGT T A++F N+++GRF + V DER S+VEA +G+ G +D+ Sbjct: 70 HPDGTPHERTQLAKRFGNQLNGRFNLPVTWIDERYSSVEAEAGIR----SGTRQAGMLDA 125 Query: 124 ASAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 EAACIILQQYLD 137 >UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nitrosococcus oceani RepID=RUVX_NITOC Length = 152 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 92/133 (69%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L FDFG + IGVAVGQ +T +A PL +KA +G PDWN I +L+++W PD +IVGLPLN Sbjct: 16 VLGFDFGLRYIGVAVGQEVTHSANPLTTLKAHEGNPDWNQITQLIRQWNPDLLIVGLPLN 75 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +EQ LT AR+F +R+HGR+G+ V+ DERLSTVEAR L + + + +D Sbjct: 76 MDQSEQFLTKAARRFGHRLHGRYGLAVEWVDERLSTVEARERLNIK-SSASGRRQGIDQM 134 Query: 125 SAVIILESYFEQG 137 +A IL+++ + Sbjct: 135 AAQCILQTWLTEQ 147 >UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=Bacteria RepID=RUVX_CLOPH Length = 150 Score = 172 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 3/135 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT---PDWNIIERLLKEWQPDEIIVG 60 ++ D+G+ ++GVA+ + TA+ + I+ + T IE L+KE++ +EI++G Sbjct: 2 RIMGLDYGSVTVGVAISDSLKLTAQGIEVIRRKSETKLRQTLARIEELIKEYEVEEIVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P NM+ T ++ +FA + R G+ V L DERL+TV A L Sbjct: 62 YPKNMNNTIGERAEKSEEFAEHLRRRTGLPVVLWDERLTTVAAHQVLNAGEVSLKKKMEV 121 Query: 121 VDSASAVIILESYFE 135 VD +AV IL+ Y + Sbjct: 122 VDKLAAVFILQGYLD 136 >UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVX_SYNAS Length = 150 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 69/132 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D+G K IGVA+ + TA+ L + + D II L++ + ++I++G PL Sbjct: 2 RILGLDYGEKRIGVALCDELGLTAQALTTVIRKSWRNDVGIIASLVRTYDVEKIVIGYPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +DGTE + +FA R+ G+ V DE L+T EA L G +G VD Sbjct: 62 RLDGTEGIQCEKVVRFARRLEAALGIPVIRWDETLTTKEAEEILSRSGVPPRKRRGVVDR 121 Query: 124 ASAVIILESYFE 135 +A +IL+SY + Sbjct: 122 LAASLILQSYLD 133 >UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0I3_9PROT Length = 167 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 84/136 (61%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + GTLLAFDFGT+ IGVAVG + +A PL I + ++ I +L+ EWQP ++VG Sbjct: 12 VVGTLLAFDFGTQRIGVAVGNTFSSSAEPLTTIAEEKNELRFSAITKLVAEWQPCALVVG 71 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP + DG+ LTA ++FA R+HGR+G+ L DER S++ A L QG K Sbjct: 72 LPCSDDGSPHELTALCQRFAKRLHGRYGLTTLLVDERYSSLAASEQLNRQGVRGRDQKAL 131 Query: 121 VDSASAVIILESYFEQ 136 +D +A IL++YF++ Sbjct: 132 IDQYAAQQILQAYFDE 147 >UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2N7_9FIRM Length = 143 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 1/135 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G +IG+AV + TA+ + ++ + D + +L++E++ D ++ GLP Sbjct: 3 RYMSLDLGDATIGIAVSDLLGLTAQGVETVRRTNIEADLAHLGQLMQEYEVDALVAGLPK 62 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +M+G E + R F + F G EV DERLSTV A L R + +D Sbjct: 63 HMNGDEGERCSIVRAFMAEVEEHFPGTEVHYWDERLSTVAASRALIAGDVSRKKRRKVID 122 Query: 123 SASAVIILESYFEQG 137 +AV IL+ + ++ Sbjct: 123 KMAAVYILQGFLDRQ 137 >UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonuclease, YrrK n=1 Tax=Oribacterium sinus F0268 RepID=C2L1K0_9FIRM Length = 141 Score = 170 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ---DGTPDWNIIERLLKEWQPDEIIVG 60 +LA D+G+K++G+A+ + +PL I + I+ KE+Q +E+++G Sbjct: 2 RILALDYGSKTVGLAITDPLGIIVQPLKTIWREREGKLRKTVEEIQETCKEYQVEELVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P +MDG+E R F + + + + L+DERLST+EA L E G + K Sbjct: 62 YPCHMDGSEGERVERVLAFQEMLKKKIELPIHLYDERLSTMEAEEILRENGVPKDRQKEV 121 Query: 121 VDSASAVIILESYF 134 +D +A +ILE Y Sbjct: 122 LDQVAAQVILEDYL 135 >UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verrucomicrobia RepID=B4D9U2_9BACT Length = 140 Score = 170 bits (433), Expect = 1e-41, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 65/134 (48%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G IGVAV + A PL I ++ I L+ II+GLP Sbjct: 3 RALGIDHGDARIGVAVSDDLGMLAHPLETIHVKEVADPVARIATLVTSKDVGHIILGLPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ P + R FA ++ G EVKL DERL++V A+ L E G ++ +D Sbjct: 63 NMDGSYGPAAEKVRAFAEKLRAACGCEVKLWDERLTSVAAQRSLHEAGRKVKDSREVIDQ 122 Query: 124 ASAVIILESYFEQG 137 +A +IL+ + + Sbjct: 123 VAAQLILQGWLDSQ 136 >UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP83_9CLOT Length = 139 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 65/131 (49%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G GVAV R A PL I+ + I +L E + ++I +GLP N Sbjct: 3 ILGIDLGKARTGVAVCDRAEMLASPLCVIQEHNRERLIEKIVKLSNERRAEQIALGLPKN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+E AR+F + + G+ V DER +TV A L + K VDS Sbjct: 63 MDGSEGESAQNAREFGALLQEKTGLPVAFVDERGTTVTAHGYLNQTDVRGKKRKAVVDSV 122 Query: 125 SAVIILESYFE 135 +AVIIL++Y + Sbjct: 123 AAVIILQNYLD 133 >UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=Lactobacillaceae RepID=RUVX_LACS1 Length = 147 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVG 60 G L+ D G++++GVAV + TA+ + ++ + ++ + I L+KE + ++G Sbjct: 2 GRLMGLDVGSRTVGVAVSDMLGWTAQGVEIVQINEDEQEFGLDRIAELVKENEVVGFVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE-QGGYRALNKG 119 LP NM+ T P A+ + + +F + + DERL+TVEA L E R K Sbjct: 62 LPKNMNNTSGPRVEAAKAYGELLEEKFNLPIDFIDERLTTVEAERMLVEQADASRKKRKK 121 Query: 120 KVDSASAVIILESYFE 135 +D +A +IL++Y + Sbjct: 122 VIDKLAASLILQNYLD 137 >UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alphaproteobacteria RepID=RUVX_RHOCS Length = 188 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L+ D G K+IG+AV A P+ I+ T D + R +++ ++VGL Sbjct: 16 NGRLMGLDLGEKTIGLAVSDPGLSVASPVGTIRRTKFTQDAQELARAMRDRDVRALVVGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGR-----FGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P+NMDGTE P R+F+ + R F E+ DERLST + R Sbjct: 76 PVNMDGTEGPRCQSVREFSRLLLQRPQLFGFEPEIAFWDERLSTSAVERMMIGWDMTRKR 135 Query: 117 NKGKVDSASAVIILESYFEQ 136 VD +A IL+ ++ Sbjct: 136 RDEVVDKMAAAYILQGALDR 155 >UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E3C Length = 169 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 2/136 (1%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G LL D+GTK IGVAV A P+ + L + ++VGL Sbjct: 14 RGALLGVDYGTKRIGVAVCDPDRVIASPVGT--QANDATREPYFRDLCARSKFAGVVVGL 71 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+ G E P++ AR FA + G+ V + DER ++ A S L G R K KV Sbjct: 72 PLHASGEESPMSGEARAFARWLSDLTGLPVVMWDERHTSFAAESALLGAGLTRKKRKEKV 131 Query: 122 DSASAVIILESYFEQG 137 D +A +IL+++ + G Sbjct: 132 DRVAAQMILQTFIDAG 147 >UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Clostridium RepID=RUVX_CLOCE Length = 142 Score = 168 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 1/134 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGLP 62 +L D+G IGVA+ + TA+ L IK++D + ++ E+ +I++G P Sbjct: 2 RILGIDYGDSRIGVAISDPMGWTAQGLEMIKSKDSLKKAVLRLSEIINEYSVTDIVIGYP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +NM+GT+ P T R +F +I + DERL+TV A + E G + KG VD Sbjct: 62 INMNGTKGPRTERTEEFIKKISDLGQFNIIKWDERLTTVSAHRTMNELGIKASKKKGIVD 121 Query: 123 SASAVIILESYFEQ 136 + SAV+IL+ Y ++ Sbjct: 122 TMSAVLILQGYLDR 135 >UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RUVX_THIDA Length = 145 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 76/133 (57%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+LAFD G K GVA G+ G A PL I+A+ IE+L EWQP ++GLP Sbjct: 8 GTVLAFDLGLKRTGVASGELAIGIAHPLTVIQAESTDARMAAIEKLAAEWQPALFVLGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DG+E +T AR FA R+ RF V L DERL++ A S L +G + NK D Sbjct: 68 TRADGSENEMTRVARNFARRLESRFERPVFLIDERLTSATAESELHARGIHGKKNKALTD 127 Query: 123 SASAVIILESYFE 135 + +A +IL+ +F+ Sbjct: 128 AVAAQLILQGFFD 140 >UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTQ9_9GAMM Length = 141 Score = 168 bits (426), Expect = 6e-41, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLL DFG K IG+A GQ +T +A PL + +W+ ++++LK+W+PD I++GLPL Sbjct: 3 TLLGIDFGLKRIGIATGQTLTCSATPLTTLPNHAEHTNWDGLDKVLKDWKPDAIVLGLPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQ----GGYRALNKG 119 N DG++ LT + R+F + + F + DER S+ EA L Q R + K Sbjct: 63 NKDGSDHALTKQVRQFRDTLGQHFSGPIHWQDERASSREAEQSLTSQRASGDLRRKVKKE 122 Query: 120 KVDSASAVIILESYFEQ 136 +D +A +IL+ + + Sbjct: 123 DIDQLAAALILQRWLNK 139 >UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betaproteobacteria RepID=C6X9Q7_METSD Length = 172 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 84/133 (63%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT LAFDFG K IGVAVG+ + G A PL I+++ + I L+ EW+P +IVGLP Sbjct: 25 GTALAFDFGEKRIGVAVGEHLLGIAHPLTTIESEANDVRFAAISALINEWRPTVLIVGLP 84 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L++DG E + RKFA R+ GRFG+ V + DERLS+ EA S L E G Y K +D Sbjct: 85 LSLDGEEHATSLLCRKFARRLDGRFGLPVVMIDERLSSAEASSSLNETGVYGRKQKVMLD 144 Query: 123 SASAVIILESYFE 135 +A IL+SYF+ Sbjct: 145 QVAAQHILQSYFD 157 >UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A3K135_9RHOB Length = 156 Score = 167 bits (425), Expect = 9e-41, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 63/132 (47%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D GTK+IGVAV + A PL +K + D ++ L+ + +I+GLP N Sbjct: 19 LMGLDLGTKTIGVAVSDGLRSVATPLETVKRKKFGVDAERLQALIAGRRIGGLILGLPRN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE P R FA + + DERLSTV A L E R +D Sbjct: 79 MDGTEGPRCQSTRAFARNFAALWDGPIGYWDERLSTVAAEKALLEADTTRKRRAEVIDHV 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASYILQGALDR 150 >UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNR4_9RICK Length = 156 Score = 167 bits (425), Expect = 9e-41, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 64/134 (47%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + +L D G K+IG++V A P I + + +++E++ I++G Sbjct: 19 NSRILGIDPGKKNIGLSVSDPNQKIATPFKIIVMKKFKQFLEELNNIIREYEIKGIVIGN 78 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P+NMDGT P + AR FA I + + L DERLS+ A + + + + + Sbjct: 79 PINMDGTSGPRSQSARDFAQNISKNTKLPITLWDERLSSEGAFNLMGDLDINSSKKSKNL 138 Query: 122 DSASAVIILESYFE 135 D +A IL+ Y + Sbjct: 139 DQHAAAFILQGYLD 152 >UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacterium Ellin514 RepID=B9XDA0_9BACT Length = 138 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 73/133 (54%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D GTK IG+A+ + A+PL + A+ +++L++E Q + ++VG+P Sbjct: 3 RILAIDHGTKRIGLAISDELGVIAQPLEFVLAEPFANFLVRLKQLIQEKQVEMLLVGMPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ P + ++F + + +K DERL++ +A L + R K KVD Sbjct: 63 NMDGSYGPAALKVQEFVTVLKDSVAIPIKTWDERLTSAQANRFLIQADVRRDKRKEKVDK 122 Query: 124 ASAVIILESYFEQ 136 +A I+L+SY + Sbjct: 123 TAAAILLQSYLDS 135 >UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0A2_METI4 Length = 168 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 70/131 (53%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L+ D+G K IG+AV A PL + A+ ++ ++ ++ +IVGLP N Sbjct: 25 ILSLDYGNKHIGLAVNDESFSIAIPLDPLPAEPYVKFIGKLKEIIVNYEVSLLIVGLPRN 84 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P + R+F ++ + V+ HDERL+T A L + G K K+DS Sbjct: 85 MDGSYGPAAEKVRQFVLKLKQWIPIPVEFHDERLTTKLADRLLTQCGCNGREKKKKIDSY 144 Query: 125 SAVIILESYFE 135 +A +IL+SY + Sbjct: 145 AAAVILQSYLD 155 >UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chloroflexaceae RepID=RUVX_CHLAA Length = 153 Score = 167 bits (423), Expect = 2e-40, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 64/131 (48%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G + IGVA+ A PL I A I RL++E ++VGLPL Sbjct: 6 ILALDVGERRIGVAISDADARIAAPLTTINAHPPERAIAQIVRLVQERGVSRVVVGLPLT 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M G P ++FA+ + V++ DERL++V A L G A K ++D Sbjct: 66 MRGERGPQAEVVQRFADTLSSALSCPVEMFDERLTSVAAEQMLRNLGLKPAKIKAQIDQV 125 Query: 125 SAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 AASIILQDYLD 136 >UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Firmicutes RepID=RUVX_OENOB Length = 144 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGL 61 LL D G+K++GVA + TA + I+ + ++ + + +++ E + I++GL Sbjct: 2 RLLGLDVGSKTVGVAQSDPLGWTASSIEIIRINEAQGEFGLDRLGQIISEKKVSGIVIGL 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGK 120 P NM+ TE P +R + + RFG+ + DERL++VEA L E RA K Sbjct: 62 PKNMNNTEGPRVEASRNYGKMVSERFGLPIDYQDERLTSVEANRMLIEEADLSRAKRKKV 121 Query: 121 VDSASAVIILESYFEQ 136 +DS +A +IL++Y ++ Sbjct: 122 IDSLAAQLILQNYLDK 137 >UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C812_9FIRM Length = 144 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 1/136 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIV 59 M +LA D+G IGVAV + TA+ + IK ++ D I++ +KE+ +I+ Sbjct: 1 MKKRILALDYGDSRIGVAVSDALHITAQGICVIKRTKNIEEDIEKIKKYIKEYDTGLVIL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G PLN+ G +F + + + + V+L DERLST EA L G + Sbjct: 61 GHPLNLSGERGTRALVTEEFCDILKEKIDIPVELWDERLSTKEAERALEAGGVNWRKKRE 120 Query: 120 KVDSASAVIILESYFE 135 +D +A IIL SY + Sbjct: 121 VIDMMAAQIILSSYLD 136 >UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B658_HERA2 Length = 158 Score = 165 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 66/134 (49%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G K IGVA+ A P + AQ + + ++ E + E+++GLP Sbjct: 8 GRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L + G + F+ + R + + L+DER ++VEA L G ++ ++ VD Sbjct: 68 LTLRGEVGAQAKAVQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVD 127 Query: 123 SASAVIILESYFEQ 136 +A++IL+ Y Sbjct: 128 ELAAILILQDYMSS 141 >UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Gloeobacter violaceus RepID=RUVX_GLOVI Length = 156 Score = 165 bits (420), Expect = 3e-40, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 2/132 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L D G+K IGVA A L I + D + I ++ + +++GLP Sbjct: 5 SVLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLPR 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+G+ P R + F ++ V + DERLSTV+A L Q K +D Sbjct: 65 NMNGSLGPQAHRIQHFGQQLARVIDVPIDYVDERLSTVQAGRAL--QSVSATRRKALIDQ 122 Query: 124 ASAVIILESYFE 135 +A IIL+ + + Sbjct: 123 QAAAIILQQWLD 134 >UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ91_ALIAD Length = 144 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 71/129 (55%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A DFG + IGVA+ + A+P I+ Q + + L + + I+VG PL+M Sbjct: 1 MAIDFGERRIGVALSDPMGLIAQPYGVIERQSDRQAADEVADLARREEVGRIVVGRPLHM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G +T+RA KFA + R G+ V L+DERL+TV A L EQ R + VD+A+ Sbjct: 61 SGQPSEMTSRAEKFARMLAARTGLPVDLYDERLTTVSAERILIEQNVRRRERRATVDAAA 120 Query: 126 AVIILESYF 134 A ++LE Y Sbjct: 121 AQVLLEDYL 129 >UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermomicrobia (class) RepID=D1C428_SPHTD Length = 143 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+A D G + +GVAV + A P+ ++ + D + L++ + P+ II+GLPL Sbjct: 10 RLIALDVGARRVGVAVSDELGLIASPVESVDMKRDGMD--RLVALIERYDPERIIIGLPL 67 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 M G E P A R FA ++ GR + DERL+T A L E G RA K VD+ Sbjct: 68 GMSGREGPQAAATRAFAQQLRGRVDRPIIFWDERLTTFMADQSLIEAGHRRARRKQHVDA 127 Query: 124 ASAVIILESYFEQG 137 +A +IL+SY + Sbjct: 128 VAAALILQSYLDSQ 141 >UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIS9_9GAMM Length = 142 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 85/136 (62%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ L FD+G IGVA GQ T TA L I+A+DG P+W I++L++EW+P +VG Sbjct: 1 MAELWLGFDWGLGWIGVASGQTETYTASKLKPIRARDGIPNWTDIDQLVQEWRPTGFVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 +P NMDG+E + RARKF R+HGRFG+ + DERL+T EA + + Sbjct: 61 IPYNMDGSESQMVVRARKFRKRLHGRFGLPAEEADERLTTREAWQHMNPASSLKKAKADD 120 Query: 121 VDSASAVIILESYFEQ 136 +DS +A IIL+S+ EQ Sbjct: 121 LDSVAAQIILQSWLEQ 136 >UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU73_9GAMM Length = 143 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 89/132 (67%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FD+G + IGVA+G + G +PL + A+DG PDW+ IERL+ EWQPD ++VG PL Sbjct: 7 TVMGFDYGLRQIGVAIGNTLLGQGKPLAIVTARDGKPDWSQIERLIGEWQPDHLVVGKPL 66 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG++ + ARA KF+ +++GRF V L DERL++ EA+S ++G +D Sbjct: 67 NMDGSDSEMGARAAKFSRQLNGRFAKPVDLVDERLTSREAKSQSRDRGHNGNYTTDPIDD 126 Query: 124 ASAVIILESYFE 135 +A +IL ++FE Sbjct: 127 EAAALILNTWFE 138 >UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Tax=Firmicutes RepID=C2DZL7_9LACO Length = 148 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 4/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGL 61 LL D G+K++GVA+ + TA+ L I + ++ I+++++E+ ++GL Sbjct: 2 RLLGLDVGSKTVGVAISDELGLTAQKLETISIDETRHNFGMKAIKKIVREYDVTGFVLGL 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG--GYRALNKG 119 P NMDG++ R++ + R+ +F + V DERL+T+EA L E+ R K Sbjct: 62 PKNMDGSDGASVNRSKNYGKRLEEKFSLPVAYSDERLTTIEADRVLIEEAEIHDRKKRKE 121 Query: 120 KVDSASAVIILESYFE 135 +D +AV+IL++Y + Sbjct: 122 VIDQMAAVLILQNYLD 137 >UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Coxiella burnetii RepID=RUVX_COXB1 Length = 141 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 88/132 (66%), Gaps = 2/132 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L FDFG K IGVAVGQ +T +A + +KAQDG DW I+ L++ W + ++VG+P NM Sbjct: 9 LGFDFGMKRIGVAVGQTVTHSANAIAILKAQDGVLDWEKIKMLIETWHANVLVVGIPYNM 68 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+EQ LT ARKFA ++ RFG+ + + DERL+T+EA+ +EQG + +D+ + Sbjct: 69 DGSEQTLTFAARKFARKLQTRFGLPLSMVDERLTTIEAKRQWYEQGLTKRPQ--HLDNYA 126 Query: 126 AVIILESYFEQG 137 A +ILE + ++ Sbjct: 127 AKLILEQWLQEQ 138 >UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2R4_9GAMM Length = 132 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 3/132 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +AFD+G K IGVAVG + T PL + A+DG P+W I L KEWQP++++VG PLNM Sbjct: 1 MAFDWGLKRIGVAVGNTLLATCEPLCVLNARDGVPNWAAIAELFKEWQPEQLVVGDPLNM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 D + +T RAR+F+ ++ GRF + V L DERL++ EAR L EQG G VD+ + Sbjct: 61 DDSVAEITRRARRFSRQLEGRFNLPVSLTDERLTSREARIQLEEQGLP---YHGAVDAHA 117 Query: 126 AVIILESYFEQG 137 A +IL+S+ + Sbjct: 118 AQLILQSWLAEQ 129 >UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alcanivorax RepID=RUVX_ALCBS Length = 133 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 71/130 (54%), Positives = 92/130 (70%), Gaps = 5/130 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFD+GT+ IGVA G + GTA PL A+ ++ P+W+ I LLKEW+P+ ++VGLPLN Sbjct: 2 ILAFDYGTQKIGVASGNELLGTATPLKALPCKNTQPNWDDIAALLKEWEPEALVVGLPLN 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG++ T RARKFANR+HGRFG +V L DERLST EAR G +A +VDS Sbjct: 62 MDGSDSESTVRARKFANRLHGRFGKKVWLIDERLSTREARER---TGIKKA--DSRVDSM 116 Query: 125 SAVIILESYF 134 +AVII E +F Sbjct: 117 AAVIIAEGFF 126 >UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomonadaceae RepID=Q0ANY7_MARMM Length = 151 Score = 164 bits (416), Expect = 1e-39, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 68/134 (50%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L+A D G+K+IGVA G + P+ IK T D + LL E Q I++GLP Sbjct: 12 GPLIALDPGSKTIGVAACGASRGLSTPVETIKRTKFTADAERVFALLDERQAVAIVMGLP 71 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +NMDG+E P R A + + + DERLST EA L G R K +D Sbjct: 72 VNMDGSEGPRVQSVRAMARNLMRLRDLPIAFQDERLSTFEAEEKLISAGVRRDKRKDIID 131 Query: 123 SASAVIILESYFEQ 136 + +A IL+S ++ Sbjct: 132 AHAAANILQSALDR 145 >UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Gammaproteobacteria RepID=RUVX_HAHCH Length = 158 Score = 163 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 91/132 (68%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FDFG K G AVGQ ++ TA PL I AQDG P W IE LL+EW+P +IVG PL Sbjct: 3 TVVGFDFGLKRFGAAVGQSVSMTASPLKEIPAQDGIPRWEAIEALLEEWKPALVIVGEPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ + RARKFA R+HGR+ + V++ DERL++ EA+S + E+ G R + VDS Sbjct: 63 NMDGSVSEMALRARKFARRLHGRYNLRVEMADERLTSSEAKSMVRERYGQRDFGRFAVDS 122 Query: 124 ASAVIILESYFE 135 +AV I+ES+ E Sbjct: 123 IAAVFIVESWLE 134 >UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Enterobacteriaceae RepID=RUVX_BUCA5 Length = 135 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 101/132 (76%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFG K IGVAVG+ IT RPL + AQ+G P+W +++ L++ WQP I+VGLPLN Sbjct: 3 VIAFDFGIKKIGVAVGENITKKGRPLSVLNAQNGCPNWQLVKNLIQYWQPQFIVVGLPLN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 ++GT+Q +T ++ KFAN + +F + VK+HDERL+TVEA+S +F++ G++ L + K+ S Sbjct: 63 INGTKQKITNKSEKFANLLKYKFNIVVKMHDERLTTVEAKSIIFKKNGFKGLKEEKIHSC 122 Query: 125 SAVIILESYFEQ 136 +AVIILES+F Q Sbjct: 123 AAVIILESWFNQ 134 >UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RUVX_UNCTG Length = 140 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D+G K IG+A+ + TA P +K + I + K I++GLPL Sbjct: 3 RIMGIDYGLKRIGIAITDFLRITASPFDTVKNVSLKKNALKILEIAKNRDVSIIVLGLPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGKVD 122 NM+GTE + RKF +I +EV DERL+TV+A L E R KG D Sbjct: 63 NMNGTEGGMAETVRKFIEKIKFLSDIEVTTVDERLTTVQAERMLIEEADISREKRKGIKD 122 Query: 123 SASAVIILESYFE 135 A +IL++Y + Sbjct: 123 KVVAALILQTYLD 135 >UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0R0_9BACE Length = 139 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 66/133 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G G+A+ A I ++ I RL+KE +E+++G P Sbjct: 2 RIMAIDYGDARTGIAISDPTGLLAGYTTVIHSRKSEVVAEEIARLVKEHGVEELVMGFPR 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE P R FA ++ G+ L DER +TVEA + L G +K VD+ Sbjct: 62 NMDGTEGPRAELYRAFAQQVGQVTGLTPVLWDERRTTVEAHNILHASGKRMKQHKKTVDA 121 Query: 124 ASAVIILESYFEQ 136 +A +ILE Y + Sbjct: 122 VAATLILEGYLTR 134 >UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9N1_ACIC5 Length = 146 Score = 162 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 69/129 (53%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G + +GVAV + TA+P+ + + D + RLL+ + E++VG PL M Sbjct: 1 MALDVGDRRVGVAVSDELGLTAQPVLTLVRTNRKQDMKSLGRLLRRFGCTEVVVGNPLYM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G P +A+ FA + FG+ V L DERL+T EA L G + ++ VD + Sbjct: 61 SGDISPQALKAQAFAAWVREEFGLPVHLWDERLTTTEAHRHLHAAGRPGSEHREVVDQVA 120 Query: 126 AVIILESYF 134 AV+IL+ + Sbjct: 121 AVLILDGFL 129 >UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zymomonas mobilis RepID=RUVX_ZYMMO Length = 163 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GTK+IG+A+ A P I+ + T D ++ + +++ Q +++GL Sbjct: 26 KGRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVKGLVIGL 85 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLN+DG++ P T R FA + + V + DER ST L E RA V Sbjct: 86 PLNLDGSDSPRTQSVRAFAKNVA-PLSLPVLMWDERWSTKAVTRTLLEADASRARRSEVV 144 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ + Sbjct: 145 DKMAAAYILQGAIDS 159 >UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQG5_ACIF5 Length = 143 Score = 162 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 74/136 (54%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG LL DFG + IG+AV + + ++ + PDW+ R+LKEWQP +++GL Sbjct: 5 SGPLLGIDFGERRIGIAVLGESGLAPQGVATLRNGECGPDWDGFARILKEWQPRALVLGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+E + R RKFA + RF + + DERLS+ A L E+ + Sbjct: 65 PLHMDGSEGFMVGRVRKFAESLQRRFPLPIHWVDERLSSHAADLVLKERELSHKKRGRLL 124 Query: 122 DSASAVIILESYFEQG 137 D A+A IL ++ G Sbjct: 125 DQAAACEILWTFHNAG 140 >UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cyanobacteria RepID=RUVX_SYNY3 Length = 152 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 66/130 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G K IGVA A + I D I++L++E + ++VGLP M Sbjct: 8 LGLDVGRKRIGVAGCDGTGLIATGITTIVRSSYDQDIAQIKQLVEERNVNLLVVGLPYTM 67 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G + +KFA R+ + + ++ DERLS+VEA + L + + + +KG +D + Sbjct: 68 AGEIGSQAKQVQKFARRVAEQLHLPLEYMDERLSSVEAENQLKARKRFSSYDKGLIDQQA 127 Query: 126 AVIILESYFE 135 A IIL+ + + Sbjct: 128 AEIILQQWLD 137 >UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Alphaproteobacteria RepID=RUVX_AGRRK Length = 164 Score = 162 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 63/132 (47%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D GTK+IG+A+ A P P IK T D + ++ + ++GLP+N Sbjct: 19 IAGLDLGTKTIGLAMSDLGRRFATPRPVIKRVKFTQDAQTLLAFAEKEKVAAFVIGLPMN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P R F + + + DERLSTV A L E RA ++DSA Sbjct: 79 MDGSTGPRVQATRAFVRSMADKTALPFVYWDERLSTVAAERALLEMDVSRAKRAERIDSA 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASFILQGALDR 150 >UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alphaproteobacteria RepID=RUVX_BEII9 Length = 165 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 57/135 (42%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 L+ D GTK+IG+++ A PL I+ T D + L ++ ++GL Sbjct: 18 RQRLIGIDLGTKTIGLSLSDVERRIATPLETIRRTKFTKDAERLLALADQFDVAAFVIGL 77 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMDG+ P F + G DERLST L Q RA V Sbjct: 78 PLNMDGSAGPRVQATEAFVRSLSGLTSRPFCYWDERLSTAAVTRDLIAQDASRAKRAAVV 137 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ ++ Sbjct: 138 DKLAAAFILQGALDR 152 >UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax=Burkholderiales RepID=A6GQ07_9BURK Length = 144 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 79/132 (59%), Gaps = 2/132 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 LAFDFG K IGVA G +T TA + ++AQ+ + IE L+KEWQP+ ++VG+P Sbjct: 14 LAFDFGLKRIGVAFGNSLTKTASGIAVVEAQNDEQRFAKIESLVKEWQPEGLVVGVPRQP 73 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG + LT R +FA ++ GRF + + DER ++ S + G NKG+VD S Sbjct: 74 DGADNELTTRCERFARQLEGRFALPCAMVDERYTSAIIESCM--GGKAARENKGRVDMGS 131 Query: 126 AVIILESYFEQG 137 A +ILE +F +G Sbjct: 132 ACLILEQFFLEG 143 >UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothiorhodospiraceae RepID=Q0ABT4_ALHEH Length = 144 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 68/137 (49%), Positives = 93/137 (67%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT LAFD G + IGVAVG+ +TG R L + A+ G PDW + RLL EW+P ++VG Sbjct: 5 VSGTWLAFDHGDRRIGVAVGEALTGGGRALITLSARAGQPDWEEVGRLLAEWRPQGVVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ DG++ T ARKFA R+HGR+G+ V+L DERLS+ EA + L E+ G G Sbjct: 65 LPLHADGSDSESTRAARKFAQRLHGRYGLRVELVDERLSSHEAAARLSERRGRPTRRPGA 124 Query: 121 VDSASAVIILESYFEQG 137 +DS +A +ILE++F Q Sbjct: 125 LDSEAARVILETWFSQQ 141 >UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=RUVX_THEEB Length = 151 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 65/132 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L D G K IGVA R+ A + I ++ D + R+ +E +++IVGLP Sbjct: 3 SVLGLDLGRKRIGVAGCDRLGQLATGITTIYRRNFASDVAQLRRICQERGVEKLIVGLPY 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +DG + + A +I + V+ DERL++ +A L ++ +K VD Sbjct: 63 TLDGQLGSQARQVQHLAEKIGAALNLPVEYIDERLTSFQAEEILKQRRRSPRHHKDLVDQ 122 Query: 124 ASAVIILESYFE 135 +A +IL+ + + Sbjct: 123 IAAALILQQWLD 134 >UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAN4_OXAFO Length = 149 Score = 160 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 10/135 (7%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LAFDFG K IG A+G ++ TARPL I A+ + I L++EWQP ++IVGLP Sbjct: 22 GVILAFDFGLKRIGTAIGNELSRTARPLEIINAEANDIRFAKIGELIEEWQPVKLIVGLP 81 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DGTE +T R ++FAN++ GRF +E+ + DER S+ S L Q G D Sbjct: 82 SYPDGTEHEMTRRCKRFANQLRGRFSLEIIMVDERYSS----SVLHFQRGKAD------D 131 Query: 123 SASAVIILESYFEQG 137 + +A +IL+ YF++ Sbjct: 132 AHAAALILQQYFDES 146 >UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RUVX_THICR Length = 134 Score = 160 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 7/135 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G ++ FDFG K IGVA+GQ IT TA P + ++DG PDW I RL +EW+P I+VG Sbjct: 5 IEGVVIGFDFGLKRIGVAIGQTITRTATPEAIVASKDGKPDWEHISRLFEEWKPSAIVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP+ ++G EQ LT ARKF R+ GR+ V +E+LS++EA + Sbjct: 65 LPMRLNGEEQALTQPARKFGQRLSGRYQRPVYYIEEQLSSIEAEQ-------RKTKTDQP 117 Query: 121 VDSASAVIILESYFE 135 +D +A IILE++ + Sbjct: 118 MDDHAAQIILENWLD 132 >UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6A4_MYCCR Length = 141 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG--TPDWNIIERLLKEWQPDEII 58 + +LA D GTK+ G A+ + A+ L ++G I L K+++ +I+ Sbjct: 3 VKKRILALDLGTKTCGFAITDPLAIIAQSLENFTYKNGDLNQIVLKIRDLQKQYEIGKIV 62 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 +G PL M+G + P T K ++ + F + V L DERLST +A L R K Sbjct: 63 LGYPLYMNGNKAPHTLLVEKMSSILKQNFQIPVVLQDERLSTSQAHDILILANVSRKKRK 122 Query: 119 GKVDSASAVIILESYFEQG 137 +D +A IILE Y + Sbjct: 123 KVIDKLAAQIILERYLSEN 141 >UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Anaeromyxobacter RepID=RUVX_ANADE Length = 137 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 73/133 (54%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G IG+AV I TAR + + + D I + ++++ +VGLPL Sbjct: 2 RTLGVDLGRVRIGLAVADEILRTARAVTTVVRRGEAEDLAAIAEVARDYEVTRAVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE P AR FA R+ GV V+L DERLS+ EA S L +G +G+VD+ Sbjct: 62 NMDGTEGPSARLARGFAPRLEAALGVPVELFDERLSSFEAESRLRARGVSARDQRGQVDA 121 Query: 124 ASAVIILESYFEQ 136 +A +IL+ + ++ Sbjct: 122 EAAAVILQGWLDR 134 >UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0P3_ERYRH Length = 144 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI-IERLLKEWQPDEIIV 59 M G ++ D G+K+ GVA+ + A P+ + + + ++ L+K+ + I + Sbjct: 1 MIGKIIGLDLGSKTCGVALSDGLGMYAHPVETLYYKVSIDELKEPLDSLIKKERVKVIAL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G P M+ + +F + F EV L DERL++V A L +Q R K Sbjct: 61 GFPKMMNNDVGERAQISEEFKKTLESWFNCEVVLIDERLTSVVANRQLIDQDVSRKKRKK 120 Query: 120 KVDSASAVIILESYFEQ 136 VD +AV IL++Y ++ Sbjct: 121 VVDQLAAVHILQTYLDK 137 >UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1W7_9PLAN Length = 153 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 66/134 (49%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G L+ D+GT IG+A+ A PL + G D +R+ +E + +VG Sbjct: 6 VRGRLIGVDYGTVRIGLAITDPEQKFASPLDNYTRRGGQADARYFQRVAQEERAAAWVVG 65 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP++ G+E + AR+FA ++ + V L DER ++ +A L G R K Sbjct: 66 LPVHTTGSESQKSTEARQFAKQLEELTKLPVFLFDERFTSADAEEMLIAAGMSRKERKSH 125 Query: 121 VDSASAVIILESYF 134 +D +A I+L ++ Sbjct: 126 LDKLAAQILLSAFL 139 >UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gammaproteobacteria RepID=RUVX_AZOVD Length = 142 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 69/124 (55%), Positives = 88/124 (70%), Gaps = 2/124 (1%) Query: 1 MSGT--LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEII 58 MSG LL FD+GT+ IGVAVGQ ITG AR L +KAQ+G PDW+ +E+L+KEW+PD ++ Sbjct: 1 MSGPRLLLGFDYGTRQIGVAVGQAITGQARELCVLKAQNGVPDWSRVEQLVKEWRPDAMV 60 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 VGLPLNMDGT ++ RA +FA R+HGRFG+ V HDERL+T EA+ QG + Sbjct: 61 VGLPLNMDGTPSEMSERAERFARRLHGRFGLPVHTHDERLTTFEAKGYRLAQGQRDGYRR 120 Query: 119 GKVD 122 VD Sbjct: 121 RPVD 124 >UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rhodopirellula baltica RepID=RUVX_RHOBA Length = 173 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 66/134 (49%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L + D+GT IGVA+ A PL D L K + +VGL Sbjct: 15 TGRLASVDYGTVRIGVAICDPDWILASPLEVHPVSTPEKDAQYFIDLAKSERIAAWVVGL 74 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++ DG E + +RKFA + G+ +L DER +TV A + + + R K +V Sbjct: 75 PIHCDGGESDKSKESRKFAAWLKETTGLPTRLFDERFTTVAANAKIRQGKTTRKKTKQRV 134 Query: 122 DSASAVIILESYFE 135 D+ +A ++LES+ E Sbjct: 135 DAVAAQVLLESFLE 148 >UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0G6_HALNC Length = 165 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 3/140 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-DWNIIERLLKEWQPDEIIV 59 + GT LAFD+G IGVAVG+++ G+ARPL + ++ W+ I +LL EW+P +++ Sbjct: 6 LPGTWLAFDYGAWRIGVAVGEQMLGSARPLTTLHHRNAHQIQWDAIGQLLDEWRPVGLVL 65 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK- 118 G PL G P+ R+F R+ GRF + V+ DERLS+ A+ L + G + K Sbjct: 66 GWPLMDSGETYPVAEFIRRFGRRLDGRFNLPVRYVDERLSSEHAQMLLTTRHGKDKVKKS 125 Query: 119 -GKVDSASAVIILESYFEQG 137 +D+ +A IILE++F Q Sbjct: 126 PSMIDAQAAAIILETFFSQS 145 >UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Alphaproteobacteria RepID=RUVX_SINMW Length = 165 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 62/132 (46%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D GTK+IG++V A P I+ D + ++ + ++GLP+N Sbjct: 19 VAGLDLGTKTIGLSVSDLGRRFATPRDVIRRVKFGIDAQALLFFAEKEKVAAFVIGLPVN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+E P R F + R + L DERLSTV A L E R ++DSA Sbjct: 79 MDGSEGPRCQATRAFVRTMGERTDIPSVLWDERLSTVAAERVLIEMDVSRKKRADRIDSA 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASFILQGALDR 150 >UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sphingomonadales RepID=RUVX_NOVAD Length = 155 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ D GTK+IGVA+ R A I+ D I ++ E I++GLP Sbjct: 17 GSLIGLDTGTKTIGVALCDREWRFATAGTTIRRTKFAADKAQIRAIVAERGVKGIVIGLP 76 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LNMDG+E P + AR A + G+ + L DER +T A + EQ RA ++D Sbjct: 77 LNMDGSESPRSQGARAMARNLED-LGLPILLWDERWTTQAAERAMIEQDFSRAKRAERID 135 Query: 123 SASAVIILESYFE 135 S +A +IL+ + Sbjct: 136 SHAAALILQGAID 148 >UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=RUVX_DICTD Length = 141 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 69/133 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G K IG+A+ + A+ L + +D N +++L+KE+ EI++G P+ Sbjct: 2 RVLAIDWGEKYIGLAISDPLRIIAQGLDVWEIKDEEDFVNRLKKLIKEYNVSEIVLGYPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ G E T + A RI + +K DER +T+EA L E R K + Sbjct: 62 SLRGHENEKTKKIEYVAERIKTVVNLPIKFVDERFTTMEAERVLLEGDIKRRDRKLLKNK 121 Query: 124 ASAVIILESYFEQ 136 +AVIIL+ Y + Sbjct: 122 QAAVIILQKYLDS 134 >UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Corynebacterium RepID=RUVX_CORJK Length = 155 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GT IGVA+ A P+ I+A D + + ++ EI+VGL Sbjct: 14 RGRRLGLDVGTVRIGVAISDPDCILATPVETIQATADDADVQRVVEICRDNFVVEIVVGL 73 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P+ + G T A +FA + + V++ DER+ST+ A G + K Sbjct: 74 PVALRGNHTQSTLNAEEFARLVKEELPDIPVRMVDERMSTMAATHAFHASGVNSKKGRKK 133 Query: 121 VDSASAVIILESYFE 135 +D A+AV IL+ + + Sbjct: 134 IDQAAAVHILQGWLD 148 >UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alphaproteobacteria RepID=RUVX_JANSC Length = 160 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 4/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M G L+ D GTK+IGVA+ R+ +A L +K + D + + L+ + + II+G Sbjct: 16 MRG-LIGLDLGTKTIGVALSDRLLTSASALETVKRKKFGVDADALAGLIAKHEVGGIILG 74 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG---VEVKLHDERLSTVEARSGLFEQGGYRALN 117 LP NMDG+E P R FA + R + + DERLSTV A L R Sbjct: 75 LPRNMDGSEGPRAQATRAFALNLSRRGDFAHLALGFWDERLSTVAAERALIAADTSRKRR 134 Query: 118 KGKVDSASAVIILESYFEQ 136 +D+ +A IL+ ++ Sbjct: 135 SEVIDAVAASYILQGALDR 153 >UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GP64_THISH Length = 163 Score = 157 bits (399), Expect = 7e-38, Method: Composition-based stats. Identities = 54/137 (39%), Positives = 84/137 (61%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T L D+G + IGVAVG R +G+ PL A+ +D PDW ++R ++EW+PD ++VG PL Sbjct: 19 TALGLDYGGRRIGVAVGSRESGSGSPLGAVSNRDDGPDWAALDRWVREWRPDVLVVGQPL 78 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY----RALNKG 119 N+DGT PL R ++F ++ R+ + V DER S+ +A L E R + KG Sbjct: 79 NLDGTPHPLAPRIQRFCEQLTERYTLPVARVDERFSSFDAEERLREARASGRRGRKVQKG 138 Query: 120 KVDSASAVIILESYFEQ 136 +D+ SA I+L+++F + Sbjct: 139 DIDALSAAILLDNWFSE 155 >UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGE6_LIBAP Length = 160 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + + + D GTK IG+A+ A P P + + T + + I+GL Sbjct: 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGL 75 Query: 62 PLNMDGTEQPLTARARKFA-NRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PLNM+G+E P R F N I + V DERL+TV A+ L + R K Sbjct: 76 PLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQK 135 Query: 121 VDSASAVIILESYFEQ 136 VDS +A +IL+ ++ Sbjct: 136 VDSIAAALILQEVLDR 151 >UniRef50_C5JAL6 Resolvase family protein, holliday junction-type, YqgF-like n=1 Tax=uncultured bacterium RepID=C5JAL6_9BACT Length = 161 Score = 157 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 LLA D+G + +GVAV + + PL I ++ + + L+ + I+VG P Sbjct: 12 QRLLAIDYGDRFLGVAVSDIMWHISTPLFPIDSKSCNA-FQALGALIDQHACGGIVVGYP 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 +NM+G+E P R R+F +I F + + L DERLSTV A + E R K KV Sbjct: 71 INMNGSEGPACERVREFCQKIKKFFPSIPIGLFDERLSTVAAERNMVEADMSRKKRKQKV 130 Query: 122 DSASAVIILESYFE 135 DS +A +L+ + Sbjct: 131 DSLAASYVLQGTLD 144 >UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Firmicutes RepID=RUVX_STACT Length = 142 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 3/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWN--IIERLLKEWQPDEII 58 ++ ++ D G+K++GVAV + TA+ L ++ + + + ++K+ D ++ Sbjct: 2 LTHKIIGLDVGSKTVGVAVSDLMGWTAQGLDTLRINEEENELGITKLAEIIKKEDADTVV 61 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +GLP NM+ + + K+ + + V + DERLST+ A L E R+ Sbjct: 62 IGLPKNMNNSIGFRGEASLKYKEELLKILPDINVVMWDERLSTMAAERSLLEADVSRSKR 121 Query: 118 KGKVDSASAVIILESYFEQ 136 K +D +AV IL+ Y + Sbjct: 122 KKVIDKMAAVFILQGYLDS 140 >UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RUVX_PARUW Length = 150 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 63/140 (45%), Gaps = 7/140 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-----DWNIIERLLKEW--QPDE 56 +L DFG IG+A A PL + + + I +L + + +E Sbjct: 9 RILGIDFGMSRIGLAQSDERKIIAMPLITVHTEKKSEQTVIKLLETISQLCETQKCEIEE 68 Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 I++GLPL M G L + FA + + ++L DERL+TV+A L E R Sbjct: 69 IVIGLPLMMSGRTGFLADEVKHFAQLLQQLTPIPIRLWDERLTTVQAERSLRESQLTRKK 128 Query: 117 NKGKVDSASAVIILESYFEQ 136 VD SA IIL+SY + Sbjct: 129 RSKVVDIVSASIILQSYLDS 148 >UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonifex degensii KC4 RepID=C9R8A9_AMMDK Length = 146 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G K+IGVAV TA+ L + + D + L + ++ +E+++GLP Sbjct: 2 RILALDVGDKTIGVAVSDPFGLTAQGLKVLHRGEEAEDVQHVLELARRYEVEEVVIGLPR 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G P + +F + + G+++ DER +T EA L R + D Sbjct: 62 TLAGEIGPQAQKVLRFGELLAQQ-GLKIIYWDERFTTKEAEKVLLAADVSRKKRRRVKDI 120 Query: 124 ASAVIILESYFEQ 136 +AV++LE+Y E+ Sbjct: 121 LAAVLLLEAYLEK 133 >UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobacteraceae RepID=A6T292_JANMA Length = 131 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 10/132 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FDFG K IGVAVG + A+PL I A + I L+++WQP IVGLP Sbjct: 3 TVLGFDFGLKRIGVAVGNTLLKQAQPLTIISAATNDAKFAAIAELVQQWQPALCIVGLPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG E +T R R+FAN++HGRF V L DER S+ +D Sbjct: 63 HPDGEEHEMTVRCRRFANQLHGRFNVATVLVDERYSSA----------VISHQRGELIDD 112 Query: 124 ASAVIILESYFE 135 +A IIL+ YF+ Sbjct: 113 QAAAIILQQYFD 124 >UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZND8_9PLAN Length = 159 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 60/134 (44%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G + DFGT IGVA+ A P + D E L K + +VGLP Sbjct: 13 GRIAGIDFGTVRIGVAITDPDRILASPFENYTRRSLKIDRQYFEELAKLERIVLFVVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E + ARKF + GV + +DER +T A+ L G + K +D Sbjct: 73 VHMSGNESGKSGEARKFGQWLGRITGVPIVYYDERFTTSIAKDYLAGLGMTKQKKKAVID 132 Query: 123 SASAVIILESYFEQ 136 +A I+L +Y E Sbjct: 133 KLAAQILLTAYLEN 146 >UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Enterobacteriaceae RepID=RUVX_WIGBR Length = 144 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 96/134 (71%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L++FDFGTK+IGVA+GQ T T++PL ++ G P+W I ++ W+P IIVGLPLN Sbjct: 8 LISFDFGTKNIGVAIGQMKTNTSKPLESVSYVKGVPNWGKINNIILLWEPKYIIVGLPLN 67 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ Q T +A+KFA ++ +F + V +HDERL+T+EA+S LF++ GY+ L K +DS Sbjct: 68 MDGSYQTSTIKAKKFAKQLRNKFFMPVMMHDERLTTIEAKSVLFKKYGYKGLKKKLIDSE 127 Query: 125 SAVIILESYFEQGY 138 SAVIIL+S+ Y Sbjct: 128 SAVIILDSWMNSIY 141 >UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Bacteria RepID=RUVX_STAS1 Length = 142 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 3/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPA--IKAQDGTPDWNIIERLLKEWQPDEII 58 + ++ D G+K++G+A+ + TA+ L I ++ + +++K ++ Sbjct: 2 LKHKIIGLDVGSKTVGIAISDLMGWTAQGLDTLRIDEENNELGIEALVKIIKRDNVGTVV 61 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +GLP NM+ + + ++ ++ +E+ + DERLST+ A L E R Sbjct: 62 IGLPKNMNNSIGFRGEASLQYKEQLQEALPSLEIIMWDERLSTMAAERSLLEADVSRQKR 121 Query: 118 KGKVDSASAVIILESYFEQ 136 K +D +AV IL+ Y + Sbjct: 122 KKVIDKMAAVFILQGYLDS 140 >UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R453_9CHLA Length = 155 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 11/144 (7%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEW-------- 52 + +++ D+G IG+A+ A L + A+ + +L++E Sbjct: 5 LPKRIVSLDYGLARIGIAISDESQTIASSLKTVAAEKKVE--RTVAKLVEEINAHQQRLA 62 Query: 53 -QPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG 111 + +EI+VGLPL M G + F + + DERL+TV+A L E Sbjct: 63 CEIEEIVVGLPLLMSGKKGFQADEVLHFVELFKAATPIPIVTWDERLTTVQAERALREGS 122 Query: 112 GYRALNKGKVDSASAVIILESYFE 135 R +D+ +AV+IL++Y + Sbjct: 123 FNRKKRSKVIDAVAAVLILQNYLD 146 >UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Candidatus Blochmannia RepID=RUVX_BLOPB Length = 144 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 2/137 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++ FDFGTK IGVA+GQ++T TA+PL +++Q G P+W I + W+P +VGLP Sbjct: 8 GIVMGFDFGTKHIGVAIGQKLTCTAQPLTVLQSQSGVPNWKRIRDIYNTWKPMIFVVGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE--QGGYRALNKGK 120 L +DG+EQP+T A+ FA ++ F V VK+HDER ST EAR F+ A + K Sbjct: 68 LKIDGSEQPITILAKIFAIQLKELFPVPVKMHDERFSTSEARLNYFKYYHDDLCARSNIK 127 Query: 121 VDSASAVIILESYFEQG 137 +++ +A +IL+S+ + Sbjct: 128 INAIAAGVILKSWLNKS 144 >UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Synechococcus RepID=RUVX_SYNJB Length = 170 Score = 154 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 63/131 (48%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G + IGVA R+ A L I+ + + D ++ ++ Q ++VG+PL Sbjct: 17 LGLDVGNRRIGVAGSDRLGLLATGLGVIQRRSLSEDIAQVQEWIRRRQATVVVVGIPLLA 76 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + ++F + + + +E LST +A L E G KG +D S Sbjct: 77 DGSVGSQARKVQRFVRALQVAVDLPIVTVNEYLSTAQAEWDLREAGIPAKAQKGLIDQQS 136 Query: 126 AVIILESYFEQ 136 A +IL+++ ++ Sbjct: 137 AAVILQTWLDE 147 >UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK4_THET1 Length = 149 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A+ A I D I R+ + ++I+VGLPL Sbjct: 2 VVMGIDPGRKRIGIALSDPTGLLATAYKVIHRTTSDRDLEEIRRIAEHENVEKIVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG---GYRALNKGK 120 +M G E RAR+ A +I G+ V+L DERL++VEA L E G K Sbjct: 62 HMSGYEGEEAVRARELAKQIETATGLPVELVDERLTSVEAERRLLESRRKLGKLGRKKLA 121 Query: 121 VDSASAVIILESYFEQ 136 +D+ +A ++L+ Y +Q Sbjct: 122 IDAEAAAVLLQDYLDQ 137 >UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1N1_9ACTO Length = 155 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG + D+G IGVAV + P ++ + + L+ E Q E+++G+ Sbjct: 4 SGVRIGVDYGKSRIGVAVTDPSGKISFPHTTLQFSPYGVHLDELLNLIVEKQAIEVVIGM 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P++++G E R FAN + + V L DERL+T +A +GL E G K K Sbjct: 64 PVHLNGKEGSSAEFVRDFANELAVEIPDIRVCLMDERLTTNQAHAGLSEMGVDNRARKNK 123 Query: 121 VDSASAVIILESYFE 135 +D +A IILE+ E Sbjct: 124 IDQLAASIILENAIE 138 >UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Coriobacteriaceae RepID=C8W9V1_ATOPD Length = 140 Score = 153 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 66/132 (50%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G IGVAV A P+ + AQ+ + +L++W+P+ ++ G P Sbjct: 2 RVLALDIGEVRIGVAVSDPDGAIASPVCVLPAQEVLSHARTFKTVLEDWEPELLLCGRPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + P + A +I + ++ DERLS+ EA+ L QG +GKVD Sbjct: 62 TLAGEDGPQAQKITVQAEQIAKNCQLPLEFTDERLSSAEAKKILRAQGLSEKAMRGKVDM 121 Query: 124 ASAVIILESYFE 135 +A + L+S+ + Sbjct: 122 VAASLFLQSWLD 133 >UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0S1_9FIRM Length = 139 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEWQPDEIIVGL 61 +L D G+++ G+A+ + A L + DG N + ++ + Q +++GL Sbjct: 3 KILGLDLGSRTCGIAMSDALGMLAHGLETYRFNDGNYKQAANYVVEIINKNQIKTVVLGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P +M+G + F + + G+ V L DERL+T A+ L R K Sbjct: 63 PKHMNGDLGERAQISIMFKEMLEKKVAGLNVVLVDERLTTKVAQDRLIFADVSRKKRKQV 122 Query: 121 VDSASAVIILESYFE 135 +D +AV IL+ Y + Sbjct: 123 IDKMAAVAILQGYLD 137 >UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG11_9ACTN Length = 171 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 64/134 (47%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +A D G IG+A+ A PL + A + L+++W PD ++ GLP Sbjct: 20 RYMALDIGDARIGIAISDPAGRVASPLKVLPAAEVLGHAASFRMLVEDWMPDALVCGLPF 79 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + P A ++ A RI + + DERLS+ EA+ L E G +GKVD Sbjct: 80 TLAGEQGPQAASLKERAQRIAKACDLPLYFSDERLSSSEAKRFLREGGYDERAMRGKVDM 139 Query: 124 ASAVIILESYFEQG 137 +A I L+S+ + Sbjct: 140 IAASIFLQSWLDSN 153 >UniRef50_UPI000050F766 Holliday junction resolvase-like protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F766 Length = 150 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 67/133 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 + D G+ IGVA A PL ++ D + ++ E++P E+++G P ++ Sbjct: 1 MGLDIGSVRIGVAASDPDGILATPLTVVRRTDEPAALKTLREIIDEYEPIELLIGDPKSL 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + A A +FA RI ++L DER +TVEA L G + VD+ + Sbjct: 61 DGSARAAAATALEFAKRISAATATPIRLVDERFTTVEAHHALAAAGKNSRQRREIVDAQA 120 Query: 126 AVIILESYFEQGY 138 AVIIL++ E + Sbjct: 121 AVIILQNALEYEH 133 >UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfovibrionales RepID=C8X295_DESRD Length = 142 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 62/134 (46%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L DFG K +G+A+ PL ++ + + ++ + + +++GLP Sbjct: 2 RYLGIDFGLKRVGLALSDSQATVVTPLATVQRSTRQALFEELLAYIETYAIEAVVIGLPY 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +++GT T +AR F + R + + DE L++ A L E G R K +D Sbjct: 62 DLEGTATLTTRQARNFGTSLARRIALPIYYVDEVLTSEFAGEALREAGVPRHKRKDLLDQ 121 Query: 124 ASAVIILESYFEQG 137 +AV ILES+ G Sbjct: 122 HAAVAILESFLASG 135 >UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Mycoplasma hyopneumoniae RepID=RUVX_MYCH2 Length = 143 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLP--AIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +LA D G K+ G A+ + + PL D + I +KE+ +++G Sbjct: 6 RILALDLGIKTCGFAISDQNWKISYPLEQFNFNRYDFASVISRIAFWMKEYPISILVLGY 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G P T FA+ + + ++V DERL+T +A++ L + G + + Sbjct: 66 PLTLAGKISPRTKMVEYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKVI 125 Query: 122 DSASAVIILESYFE 135 D +A IILE + Sbjct: 126 DKLAAQIILERFLN 139 >UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GL40_9DELT Length = 140 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 59/129 (45%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L DFG K +G+AV PL I + + +++E + I++GLPL Sbjct: 4 LGIDFGIKRVGLAVSDEKGKMVFPLKTIHRSTRENLFLELLNIIQERGIEAIVLGLPLGP 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG + +A F + R + + +E +++EA L G K +D A+ Sbjct: 64 DGEKSLTCRQAENFMQSLDRRTDLPIYTVNEAYTSMEAEDILNRCGIRVEKQKESLDQAA 123 Query: 126 AVIILESYF 134 AVIILES+ Sbjct: 124 AVIILESFL 132 >UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Bacteroidetes RepID=RUVX_BACTN Length = 138 Score = 152 bits (384), Expect = 5e-36, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G K G+AV + A L + + N I + + + II+GLP Sbjct: 3 RIVAIDYGRKRTGIAVSDTLQLIANGLTTVPTHEL---LNFIGGYVAKEPVERIIIGLPK 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KGK 120 M+ F + RF + V+ DER ++V A + E G + K Sbjct: 60 QMNNEASENMKNIEPFVRSLKKRFPELPVEYVDERFTSVLAHRTMLEAGLKKKDRQNKAL 119 Query: 121 VDSASAVIILESYFEQ 136 VD SA IIL++Y E Sbjct: 120 VDEISATIILQTYLES 135 >UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9BACT Length = 140 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 3/133 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D GT IGVAV + A+ + KA P + +ER + + ++VGLP+ Sbjct: 3 RIICLDVGTVRIGVAVSDPLGMFAQGIAVWKAD--GPWLDELERAFERYDTGCLLVGLPI 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DGT P + I RF V V+ DER ST A S L E R K VD Sbjct: 61 REDGTIGPSAQHVQDVVKEIQRRFPMVTVRYWDERYSTCTATSYLLEGNVSRRKRKQSVD 120 Query: 123 SASAVIILESYFE 135 +A +IL+SY + Sbjct: 121 KIAAAVILQSYMD 133 >UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URD1_AKKM8 Length = 141 Score = 151 bits (383), Expect = 7e-36, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+G IG+A + A P+ I + I +L++E +++GLP+ M Sbjct: 8 LGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDG-ISRIVQLVQERGIRTLVLGLPVRM 66 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DGTE A+ R F + G+ + DE L+TV A+ L G + +D Sbjct: 67 DGTEGTAAAKVRAFGRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQV 126 Query: 125 SAVIILESYFEQ 136 +AV IL ++ + Sbjct: 127 AAVEILNTWLDS 138 >UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMF8_9BACT Length = 138 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ ++A D GT IGVA+ + A+ + A+ + + L+ ++VG Sbjct: 1 MTRRIVALDMGTVRIGVAMSDPLGSFAQGVAVWDAEGDW--LSDLRDLVTSRDVSTVVVG 58 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP+ +GT+ P + F +E+ + DER ++ A L E R KG Sbjct: 59 LPIRENGTKGPSAENVEAKTEAVREAFPDLEIVMWDERYTSTIANRVLIEGDVSRKKRKG 118 Query: 120 KVDSASAVIILESYFEQ 136 +VD +A +IL+ Y + Sbjct: 119 QVDKVAATVILQGYLDS 135 >UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFM1_9BACT Length = 138 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 66/135 (48%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G +LA D+G K IG+A+ ++PL + + +++L+ Q +I+G+ Sbjct: 4 KGRILALDYGEKRIGIALSDPNRIFSKPLCVLSNKGFEQLVEELKKLITLHQVTLLIIGI 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P +DG+ P T ++ NR+ + V+ DER ST EA L + G K Sbjct: 64 PYAIDGSITPKTEECQQILNRLKDVLSISVEGFDERYSTWEANEELKKMGYNWRQAKEIK 123 Query: 122 DSASAVIILESYFEQ 136 D+ SA +IL+ + Q Sbjct: 124 DAMSAAMILKEFLNQ 138 >UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUM0_9GAMM Length = 156 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 83/139 (59%), Gaps = 6/139 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ DFG +G+A+G +T TA PL K +G P+W+ + ++++ WQ II+GLPL Sbjct: 13 TVMGLDFGIAKMGIALGNTLTQTASPLMQFKMDNGKPNWDELLKIIESWQVSTIIIGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 NMDG+ L RA+KFA R+ + L DERL++ EA+S +E G ++ +K Sbjct: 73 NMDGSASELGNRAKKFARRLKHHLEEAHRPRPIILADERLTSREAKSLAWEYGLIKS-DK 131 Query: 119 GKVDSASAVIILESYFEQG 137 +DS ++ I+L S+ G Sbjct: 132 EPIDSIASAIMLGSWLRSG 150 >UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Actinomycetales RepID=RUVX_FRASC Length = 202 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGL 61 G + D G+ +GVA A P+ + + G D + + +++E Q E++VGL Sbjct: 24 GVRIGVDVGSVRVGVAASDPGGVLAVPVTTLARDRRGNADIDQLVLIVRERQAVEVVVGL 83 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P M G E R++A + R V V+ DERL+TV A + E+G + Sbjct: 84 PRQMSGQEGRAVRLVRQYAEVLAERIAPVPVRFVDERLTTVAAHRRMAERGVRSRARRSL 143 Query: 121 VDSASAVIILESYFEQ 136 VD +AV IL+ + Sbjct: 144 VDQEAAVQILQHDLDS 159 >UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Acinetobacter RepID=RUVX_ACIAD Length = 147 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 82/129 (63%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGT+ +G+A+GQ ++ PL +DG PDWN + +++KEWQP +VGLPLN Sbjct: 10 IMAFDFGTQKMGIAIGQAAIESSTPLALFPMKDGIPDWNQLLKIVKEWQPTLFLVGLPLN 69 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +E L+ARARKFA R+ + + + DERL+T EAR L K DS Sbjct: 70 MDDSESELSARARKFARRLRHQTNITTWMVDERLTTREARDELESYQEQGRAKKIAADSI 129 Query: 125 SAVIILESY 133 +A ++++S+ Sbjct: 130 AASLLIQSW 138 >UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bordetella RepID=RUVX_BORA1 Length = 131 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFDFG K IGVA+G +T ARPL I ++ + I+ LL+ W+P ++VGL L Sbjct: 5 TLLAFDFGEKKIGVAIGNTLTCHARPLEIIFSERRDERFGRIQALLEAWRPQRVVVGLAL 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG +QP T R R+FAN++HGRFGV V+L DER S++EA+ L D+ Sbjct: 65 ATDGGDQPATLRCRRFANQLHGRFGVTVELVDERGSSMEAQEKLGS--------HAPDDA 116 Query: 124 ASAVIILESYFEQ 136 +A IIL+ Y ++ Sbjct: 117 MAAAIILQRYLDR 129 >UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hydrogenothermaceae RepID=RUVX_SULSY Length = 145 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 6/135 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K IGVAV TA PL I + + I L+K ++ +I++GLPL Sbjct: 3 RILGLDIGLKRIGVAVSDPFGVTATPLEFIL--NDEKVFEKINDLIKNYKISKIVIGLPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + G E ++F + +E+ DER ++ A L + K+ Sbjct: 61 TLKGEEGEQARYTKEFVENLKNHIPQDIEIIFVDERFTSSLAEKTLLQTKKKNKK--EKI 118 Query: 122 DSASAVIILESYFEQ 136 DS SAV IL++Y ++ Sbjct: 119 DSLSAVFILQTYLDR 133 >UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Desulfovibrionales RepID=RUVX_DESDG Length = 144 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 61/130 (46%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+GT+ G+AV A P I + + +++E +P ++VGLPL Sbjct: 4 LGIDYGTRRTGIAVTDGAGMMAFPRRTIVMSTRDAFFAELLSVVEEERPAGVVVGLPLLA 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G E +T + R F R+ R + V L E LS+ EA L E G + VD + Sbjct: 64 GGEETLITRQVRNFVARLRRRSSLPVYLVAEELSSFEAGEDLREAGLSFREREAVVDQQA 123 Query: 126 AVIILESYFE 135 AV ILES+ Sbjct: 124 AVRILESFLN 133 >UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5H3_THEAS Length = 142 Score = 149 bits (377), Expect = 3e-35, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G IGVA+ A PL +K ++G P ++ L++ I+VGLP Sbjct: 6 GRVMALDLGEVRIGVALSDPSRSFASPLEVLKMEEGWPL--KVKELVERNSVTLIVVGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + DG+ P R + + VE+ DER +T A+ L E R KGKV Sbjct: 64 IRTDGSSGPEVQRVMGWLEELKAVVQQVEIVTVDERFTTSIAQRFLLEGDVRREKRKGKV 123 Query: 122 DSASAVIILESYFEQ 136 D +A ++L+ Y Sbjct: 124 DKVAAALMLQDYLNS 138 >UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Clavibacter michiganensis RepID=RUVX_CLAM3 Length = 161 Score = 148 bits (375), Expect = 6e-35, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 1/134 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVGL 61 G+ LA D G IG+A A P+ + G+ D I + E E++VGL Sbjct: 4 GSRLAVDVGKARIGLARSDPHGLIATPVETVPRDPAGSADVRRILAVATEIDCAELVVGL 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G T A FA R+ + V+L DERLSTV A+ L G K + Sbjct: 64 PLALSGRATASTDDAEGFARRLADATEIPVRLVDERLSTVSAQGALRASGRGSRKQKPVI 123 Query: 122 DSASAVIILESYFE 135 D +AVIIL+ E Sbjct: 124 DQVAAVIILQHALE 137 >UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sphingobacteriales RepID=RUVX_CYTH3 Length = 152 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LAFDFGTK IG+A + A L + +D +++ L + +VGLP Sbjct: 3 RILAFDFGTKRIGIASTDPMQIIANALDTVHPKDVVV---YLKKYLNTEPVEAFVVGLPR 59 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK-- 120 + E A + F N I F + DER ++ A + G + + K Sbjct: 60 TLQNEESSNAANVKAFINLIKKNFPQTPIYGVDERFTSSMAFDTMLAGGVSKKGRRDKAT 119 Query: 121 VDSASAVIILESYFEQ 136 +D SA IIL+S+ EQ Sbjct: 120 IDKISATIILQSFMEQ 135 >UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Anaplasmataceae RepID=RUVX_ANAPZ Length = 166 Score = 148 bits (374), Expect = 7e-35, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 60/132 (45%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L DFG + IG+A+ A P ++ D + +L+ +++G PL Sbjct: 18 RILGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDLGELSAVLRSEDAAVVVMGNPL 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E + R FA ++ + GV + LHDER +T A E G R ++ D Sbjct: 78 QSDGLEGEMCQIVRAFAQKLIKKSGVSIYLHDERYTTAMASRATREAGLRRKESQKIDDK 137 Query: 124 ASAVIILESYFE 135 SA ++L+ + Sbjct: 138 ISAALVLQQVLD 149 >UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protein n=1 Tax=Spiroplasma citri RepID=Q14MG2_SPICI Length = 139 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 2/138 (1%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ LA D G+K++G+A Q + T + D + L+ Q +IIVG Sbjct: 1 MAKYYLAVDVGSKTLGLATSQGLIATGYGVYRFPENDFLQAAQYLAGLITTEQFSDIIVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNK 118 P NM+ T P F N + + + L DERL+T +A + E R K Sbjct: 61 YPKNMNNTIGPRALMVSDFVNLLKQLLDPTITIHLVDERLTTHQAHQIMLEANLSRQKRK 120 Query: 119 GKVDSASAVIILESYFEQ 136 K DS +A +ILE+Y Q Sbjct: 121 QKKDSLAAQLILETYLHQ 138 >UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Polynucleobacter necessarius RepID=RUVX_POLNS Length = 147 Score = 147 bits (373), Expect = 8e-35, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T +AFD+GT+ +GVAVG +T PL I A + + IE+LL EWQP++++VG P Sbjct: 12 TAMAFDYGTRRVGVAVGNSVTKAGEPLKTIAAPNSDTLFKDIEQLLAEWQPNQLVVGHPT 71 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG +TA+A +F N++HGRF + V DER ++ + E A + +D+ Sbjct: 72 HPDGAPHEMTAKAIRFGNQLHGRFQLPVAWVDERYTSA-----VLEGD---AQMRDNLDA 123 Query: 124 ASAVIILESYFEQ 136 SA +ILE YF + Sbjct: 124 HSATLILEQYFSE 136 >UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chlorobiaceae RepID=RUVX_CHLPB Length = 144 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G K G+A A+P+ + II+ L+E ++IIVG PL Sbjct: 8 RILAIDYGKKRTGLAKTDPFCSFAQPVGTFPPEKI---ITIIKSFLQENSVEKIIVGYPL 64 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRAL--NKGK 120 N DGT+ P+T F + F + V+ DE S+ +A L E G R KG+ Sbjct: 65 NSDGTKNPMTGIIDGFIEELSAAFPDIPVEPIDEHGSSKQAGKVLIESGLSRKKRQRKGR 124 Query: 121 VDSASAVIILESYFEQ 136 +DSA+A ++L+ Y E Sbjct: 125 LDSAAACLLLQHYLEN 140 >UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJF8_9BACT Length = 140 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ DFGTK G+A + A L + + P +++ + + D +VG P Sbjct: 2 GSLIGIDFGTKRTGLACTDPLKIIASGLKNLSTPEVIP---FLKKYCEMEEVDTFVVGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVE-VKLHDERLSTVEARSGLFEQGGYRALN--KG 119 L DGT + + F ++ +F + ++ +DER ++ A + G + KG Sbjct: 59 LQKDGTPAEVEVDIKNFIKKLQNQFPSQSIERYDERYTSKLAFQSMINGGLKKKQRADKG 118 Query: 120 KVDSASAVIILESYFE 135 +D SA +IL+SY + Sbjct: 119 MIDQVSATLILQSYLD 134 >UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G871_9FIRM Length = 147 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 3/138 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD---WNIIERLLKEWQPDEI 57 ++ ++A D+G K++GVA + TA+ + + + I+++ ++ + I Sbjct: 6 LADHIMALDYGAKTVGVACTDSLGLTAQAVETVWRKRENKLRKTLARIDQIARDREIRLI 65 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +VGLP+NMD +E AR FA+++ R G+ V+++DERLST+EA L + G Sbjct: 66 LVGLPVNMDDSEGERAGMARDFADQVAQRTGIAVEMYDERLSTIEADEILGKSGVPVGKR 125 Query: 118 KGKVDSASAVIILESYFE 135 K +D SA +ILE Y E Sbjct: 126 KRHLDELSAQLILERYLE 143 >UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Actinomycetales RepID=RUVX_LEIXX Length = 155 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 61/134 (45%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG L D GT IGV+ A P + D I ++ + EIIVGL Sbjct: 3 SGVRLGIDVGTVRIGVSCSDLHGTLATPYETVARSGDAADRRRIAEIVTDLGVVEIIVGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G TA A FA + G V+L DERLSTV A S L G ++ V Sbjct: 63 PLALSGVHTASTADAVAFAEALVVEVGAPVRLVDERLSTVSAHSALRSSGKNAKSSRPVV 122 Query: 122 DSASAVIILESYFE 135 D A+A IIL+ + Sbjct: 123 DQAAATIILQHALD 136 >UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HX36_9SPHI Length = 137 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 7/138 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D GTK G+AV + A PL I+ + I+ + + + D +++GLP Sbjct: 3 RVLAIDLGTKRTGLAVTDPLKMLANPLETIETFKL---IDFIKAYIAKEEVDTLVLGLPT 59 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK-- 120 ++G + +T + ++ F +V+L DER ++ A + G + + K Sbjct: 60 KLNGKDNEMTPKVMAMKTKLEKNFPSQKVELVDERFTSKMAMQSMITMGSKKKDRREKAG 119 Query: 121 -VDSASAVIILESYFEQG 137 +D SA IIL+SY E+ Sbjct: 120 NLDKVSAAIILQSYLERQ 137 >UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=RUVX_HYPNA Length = 151 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 63/134 (47%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D GT +IGVA RI A P+ I + P + + E +IVGLP Sbjct: 13 GVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSLERLLHIYDERAAVGLIVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LN+DG+ P R + + + V DER S+ EA + G R + ++D Sbjct: 73 LNVDGSMGPRAQSVRTLVSSLLKVRDLPVTFQDERYSSAEAGDIMRAAGATRRNREARID 132 Query: 123 SASAVIILESYFEQ 136 +++A +IL+ + Sbjct: 133 ASAAAVILQDALSR 146 >UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0ML47_9FIRM Length = 149 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 66/132 (50%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G G+A R A P+ I ++ + E++ E++VG P+ Sbjct: 2 KIMAVDYGDAHTGLACCDRTQTLASPIGVIDERNFQTCVEKVAAAAVEYEVGEVVVGNPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P + + R FA+ + + V + DER +TV A + + + K +D+ Sbjct: 62 NMNGTYGPRSEKCRMFADMLQNFLEIPVVMWDERSTTVTAHNMMNDVNKRGKERKKVIDA 121 Query: 124 ASAVIILESYFE 135 +A +IL++Y + Sbjct: 122 VAAAVILQNYLD 133 >UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Propionibacterium acnes RepID=RUVX_PROAC Length = 160 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G LA D+G IGVA R A P+ + D + ++ E++P E+I+G Sbjct: 11 LCGVRLAIDWGKARIGVAASDRDAILAFPVETVHTADRP--VQRLAEIVAEYEPVEVIMG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP+ ++GTEQ R ++ + V+ DER++T A L E G +G Sbjct: 69 LPVALNGTEQLAAQDVRDAGRQLTEAINPIPVRWVDERMTTRTAARALHEAGRNARKQRG 128 Query: 120 KVDSASAVIILESYFEQ 136 +D A+AV ILE EQ Sbjct: 129 VIDQAAAVAILEHVLEQ 145 >UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomonas intermedia K12 RepID=C7I5C0_THIIN Length = 137 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 78/133 (58%), Gaps = 10/133 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FD+G K IG AVG +T +A L +++A ++ I L++EWQP +++VGLPL Sbjct: 14 TVLGFDWGAKRIGTAVGNSLTRSATALRSLRADRNDLKFDAIAALIREWQPQQLVVGLPL 73 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG TA A++FA ++ GRF + V L DER ++V A VDS Sbjct: 74 HPDGAAHDNTAHAQRFARQLEGRFRLPVALVDERYTSVAAED----------DGAKDVDS 123 Query: 124 ASAVIILESYFEQ 136 A+A +I+E Y +Q Sbjct: 124 AAAQLIVEQYLQQ 136 >UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteria RepID=A1AV92_RUTMC Length = 142 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 1/132 (0%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L FD GTK G+A+ +T A + I ++G+ +W ++ ++ +VGLP N Sbjct: 7 LGFDVGTKRTGIAIANSLTMQATGIKVIKHHKNGSTNWVAFNEVISAHNINKFVVGLPFN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G EQ +T A+ F N++ R+ +EV+ DE LS+ EA+ L + + VD Sbjct: 67 QQGKEQTMTFIAKSFGNKLKNRYQIEVEFIDEYLSSNEAKKLLKYNHHHHNAQRDDVDKQ 126 Query: 125 SAVIILESYFEQ 136 S+ +IL+++ + Sbjct: 127 SSQLILQTWLNE 138 >UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Orientia tsutsugamushi RepID=RUVX_ORITB Length = 157 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 1/132 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K +GVA+ A PL I A + N I+ + + I++GLP Sbjct: 19 ILGIDFGEKKVGVAISNIEHTVAMPLQTILATNQD-RVNKIQEIAVAYNIGAIVIGLPFK 77 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +DGTE T R + FAN++ + + + L DERL++ A + L R + D Sbjct: 78 LDGTETSQTHRVKDFANKLANKLLLPIFLCDERLTSKAANNLLKIGNIKRKVRNAIDDRV 137 Query: 125 SAVIILESYFEQ 136 +A IILE ++ Sbjct: 138 AASIILEGALKR 149 >UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Alphaproteobacteria RepID=RUVX_CAUSK Length = 164 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 2/135 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K+IGVAV A PL IK + D + +L+ + I++GLP+ Sbjct: 18 PIVGLDPGEKTIGVAVSDVTLTVASPLALIKKTKFSEDAATLFQLMGSRKAAGIVIGLPM 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQ-GGYRALNKGKV 121 NMDGTE R + + + DERLST L E+ R V Sbjct: 78 NMDGTEGVRCQSNRALGRNLLRLQPHIPITFWDERLSTAAVTRVLIEEHDVNRKRRAEVV 137 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ E+ Sbjct: 138 DKMAAAWILQGALER 152 >UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Rickettsia RepID=RUVX_RICB8 Length = 154 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 65/135 (48%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L++ D+G+K IG+A+ + A PL I + +++++ I++GL Sbjct: 16 NAPLISIDYGSKKIGIAISNQERNIAMPLNIITEASKKAIIASLLEKIEQYKACGIVIGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++M G + +A KFA + + + L DERL+T A + L G R Sbjct: 76 PIDMSGMQTEQSAIVIKFAEELTKSINLPIYLQDERLTTKAANNFLKSFGIKRKERNNND 135 Query: 122 DSASAVIILESYFEQ 136 D+ +A +ILE+ Sbjct: 136 DAVAASMILETVLNS 150 >UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=RUVX_DICT6 Length = 139 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 71/134 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G K +G+A+ + A+ L + + + ++RL++++Q EI++G P+ Sbjct: 2 RVLAIDWGEKYVGLAISDPLRIIAQGLDVWEIKGEEDFVSRLKRLVEDYQVKEIVLGYPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ G E T + R A I G+ VK DERL+T+EA L E R K + Sbjct: 62 SLRGHENERTQKVRHIAELIESVIGIPVKFVDERLTTMEAEKVLLEGDIKRKKRKLLKNK 121 Query: 124 ASAVIILESYFEQG 137 +AVIIL+ Y + Sbjct: 122 QAAVIILQKYLDSS 135 >UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYY4_9GAMM Length = 148 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 68/132 (51%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L D+G++ IG+A+ + RPL + G PDW +E++L +W P +VGL Sbjct: 10 TGPWLGIDYGSRRIGLAILAHLDIAPRPLGTVANGGGGPDWPALEKVLAQWAPVACVVGL 69 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 DGTE + AR FA + R+G+ + DERLS+V A L E + + + Sbjct: 70 TARADGTESAVARGARHFAAALSQRYGLPILWQDERLSSVTAAVRLREASPRKRRQRLAL 129 Query: 122 DSASAVIILESY 133 D +A IL + Sbjct: 130 DPLAACEILRGF 141 >UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bifidobacteriaceae RepID=RUVX_BIFLD Length = 152 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 14/147 (9%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIK-AQDGTPDWNIIERLLKEWQPDEIIVGLP 62 L D G +G+A+ A P I A D + + ++++ D +IVGLP Sbjct: 2 VWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGR------------FGVE-VKLHDERLSTVEARSGLFE 109 L MDGTE +AR++A + R + + V L DERL+TV A LFE Sbjct: 62 LQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFE 121 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQ 136 ++ VD SAV+IL++ ++ Sbjct: 122 AHKASNKHRPVVDQQSAVVILQTALDR 148 >UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Francisella RepID=RUVX_FRAT1 Length = 136 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L+A D+G IG++ GQ IT TA P+ ++A DG P+W +++++K W P +II+G Sbjct: 1 MFQSLIAIDYGKARIGISSGQMITKTATPIGTVEAYDGVPNWIELDKIIKCWNPSDIIIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ E +T A+ FA + R+ +V L +E ST EAR L E + ++ K Sbjct: 61 LPLDTQNFETDITKSAKDFAKEVQQRYQRKVHLINEAYSTREARWRLEEV-KSKKVSHIK 119 Query: 121 VDSASAVIILESYFEQG 137 VD+ +A +ILE++ + Sbjct: 120 VDALAACVILETWMSEN 136 >UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVX_DESAP Length = 141 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 57/133 (42%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+ D G + IGVA+ A PL ++ D I ++ ++ + ++ GLP Sbjct: 2 RLMGLDIGDRRIGVALTDENGVAAYPLEVLERTSPEKDLRRITEIIDQYGVERVVAGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G P + F +++ R V V DERL+T E L R + VD Sbjct: 62 TLSGQIGPQGDKVLSFLDKLRVRSTVPVITWDERLTTAEVEKLLVSADLGRRRRRKVVDK 121 Query: 124 ASAVIILESYFEQ 136 +A +IL SY Sbjct: 122 LAATLILNSYLNS 134 >UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT Length = 139 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 7/136 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G K G+AV + A L + + ++ + ++ D+I++G P Sbjct: 2 GRILAIDYGKKRTGIAVTDPLRIIANGLATVPTSEL---YDYLVAYIRSEAVDKIVIGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGY---RALNK 118 + +G R +FANR + ++ +DER ++V A + G R +K Sbjct: 59 IQANGQPSENFVRVEQFANRWKKVQPTIPIEFYDERFTSVIAHQAMIVGGVKKKTRREDK 118 Query: 119 GKVDSASAVIILESYF 134 G VD SA IIL+ + Sbjct: 119 GLVDEISATIILQDFM 134 >UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWK5_9ACTO Length = 152 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 ++G LA D G IGVA T A P+ ++ Q + + + ++ + P + VG Sbjct: 2 VAGNFLAIDVGKARIGVARSVSGTSLALPVKTLQVQPDGSELDELLAIITDSNPAAVFVG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP M G E AR +A R+ R G + V L DERLS+ +A + L + G K Sbjct: 62 LPKLMSGKEGEAARMARSYARRLVRRLGELPVHLIDERLSSADAHAKLQQAGVCARRQKE 121 Query: 120 KVDSASAVIILESYFE 135 VD +AV IL E Sbjct: 122 MVDQLAAVTILTRALE 137 >UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZF9_9FIRM Length = 148 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G +IGVA + TA+ L +I + D I +L+E EI++G+PL Sbjct: 2 RVLALDVGEATIGVARSDALGITAQGLLSIFRESIKKDTTKIIDILREDDYSEIVIGMPL 61 Query: 64 NMDGT-EQPLTARARKFANRIHGRF------GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 N G + + KFA+++ + ++V+ +DER +T AR L + G Sbjct: 62 NTYGEAKNEQSIFTEKFADKLQNKLRSSGMSNIKVEFYDERFTTKMARDVLIQGGIKGKK 121 Query: 117 NKGKVDSASAVIILESYFEQ 136 K +D +AVI+L+SY ++ Sbjct: 122 QKDVIDKQAAVILLQSYLDK 141 >UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Methylococcus capsulatus RepID=RUVX_METCA Length = 151 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 82/132 (62%), Gaps = 1/132 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T L FDFG ++IGVAVGQ +TGTA PL ++AQ W I L+ +W P ++VGL Sbjct: 12 TYLGFDFGERNIGVAVGQSVTGTAAPLRTLRAQPSARLWAAISELIDQWLPAGLVVGLSH 71 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV-D 122 DG+E P+TA +F ++ GR+ + V DE L+T E+R+ +++ +++ +V D Sbjct: 72 QQDGSENPITAPTLRFCRQLEGRYRLPVYTVDETLTTAESRTHFYQRRRRKSVEFEQVKD 131 Query: 123 SASAVIILESYF 134 +A +IL+++F Sbjct: 132 EMAAQLILQTWF 143 >UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Bacteria RepID=RUVX_PARD8 Length = 140 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K G+A + A + + + + + + D +VGL Sbjct: 2 GRIIAIDYGRKRTGIAATDILQMIANGVATVPSGEV---VKYLSDYISREPVDLFVVGLR 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 M+ F + + V +DER ++V A + E G + KG Sbjct: 59 KQMNNEPSENMKYVEAFVTHLKRTIPSIPVTYYDERFTSVLAHKAMLEGGLKKKKRQDKG 118 Query: 120 KVDSASAVIILESYFEQ 136 VD SAVIIL++Y E Sbjct: 119 LVDEISAVIILQAYLES 135 >UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xanthomonadaceae RepID=RUVX_XYLFM Length = 155 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +L FD GT+ IGVAVG AR + I DWN ++R+ + W P ++VG P Sbjct: 11 GIVLGFDVGTRRIGVAVGSAWGAGARAVAVIDVHGVAVDWNALDRVKRNWLPVGLVVGDP 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL---FEQGGYRALNKG 119 L ++G +QP+ +A FA ++ R+ + V L DER S+VEA S G R + Sbjct: 71 LTLEGHDQPIRKQAHAFACQLRERYRLPVVLVDERSSSVEAASRFAGARAAGYKRRRDAD 130 Query: 120 KVDSASAVIILESYF 134 +D+ +A +ILE + Sbjct: 131 TLDAIAAAVILERWL 145 >UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKC4_9GAMM Length = 130 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LLAFD+G + IG+AVG+ +TG AR L + D W +I+RL+ EW P+ +VG P Sbjct: 3 LLAFDYGRRRIGIAVGEELTGAARGLRTLN-TDSPELWPVIDRLVSEWAPEGFVVGWPTQ 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG PL R R F + R+ V +DE L++ AR R + +D+ Sbjct: 62 ADGKPTPLAKRIRAFGAALEARYNQPVYWYDEHLTSHLARER-----SGRGRHDPGLDAH 116 Query: 125 SAVIILESYFEQG 137 +A +ILE +F++ Sbjct: 117 AAAVILEGWFQEN 129 >UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clostridia RepID=RUVX_CALS8 Length = 138 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G++ IGVA+ + A+P + Q ++ ++++ E Q ++I++G P+ Sbjct: 2 RILCLDIGSRRIGVAISDPLKIAAQPFCVLDLQKED-LYSCLDKIFNEHQIEKIVIGYPV 60 Query: 64 ---NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 + D + + + + R+ V + DER ST L E+ K Sbjct: 61 SKFHPD-KATEKLQKIDEICSELERRYKVGIIKWDERFSTKAVERILREENVSWQKRKKV 119 Query: 121 VDSASAVIILESYFE 135 VD +AV IL+ Y + Sbjct: 120 VDKLAAVYILQGYLD 134 >UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Bacteria RepID=RUVX_FUSNN Length = 138 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 3/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +A D G IGVA + A PL I + I + KE + ++VG+P Sbjct: 3 RYIALDIGDVRIGVARSDIMGIIASPLETINRKKVKS-VKRIAEICKENDTNLVVVGIPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA-LNKGKV 121 ++DG E+ + R++ ++ +E+ DER STV A + L E A + V Sbjct: 62 SLDGEEKRQAEKVREYIEKLKKEIENLEIIEVDERFSTVIADNILKELNKNGAIEKRKVV 121 Query: 122 DSASAVIILESYFE 135 D +A IIL++Y + Sbjct: 122 DKVAASIILQTYLD 135 >UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIA0_KOCRD Length = 165 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 8/145 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG---TPDWNIIERLLKEWQPDEI 57 + G + D GT +G+A+ A P + D II +L ++ + Sbjct: 6 VRGVRMGVDVGTVRVGIALTDPDCVLATPHQTLTRDPNPRKAFDVKIITKLCEQRDVRTV 65 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG-----VEVKLHDERLSTVEARSGLFEQGG 112 VGLP +++G E T AR +A + R G EV+L DERLSTV A L + G Sbjct: 66 YVGLPRSLNGHENDSTRMARDYAAGLLRRLGSRGCTTEVRLVDERLSTVTAHRSLLDSGV 125 Query: 113 YRALNKGKVDSASAVIILESYFEQG 137 R + +VD A+AV L++ +QG Sbjct: 126 SRREHMDRVDQAAAVTFLQTAVDQG 150 >UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Actinomycetales RepID=RUVX_CORA7 Length = 182 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 13/149 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-----TPDWNIIERLLKEWQPDEI 57 G L D GT IGVAV R A P+ ++ + G D + + L+ E+ E+ Sbjct: 16 GRRLGLDVGTVRIGVAVSDRDARLAMPVETVRRETGFKDRDKDDIDRLLDLIHEYDAVEV 75 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGV--------EVKLHDERLSTVEARSGLFE 109 VGLP ++ G A++ A RI R V++ DERL+TV A S L Sbjct: 76 AVGLPRDLKGNGSSSVKHAKEIAFRIRRRLAKDDRMKEPPPVRMVDERLTTVVATSALRA 135 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQGY 138 G + +D A+AV IL+S+ + + Sbjct: 136 SGVSEKRGRSVIDQAAAVEILQSWLDARH 164 >UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Candidatus Pelagibacter RepID=RUVX_PELUB Length = 151 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 56/132 (42%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D G+K IGV++ A P I + + ++ ++K+ IIVG P+ Sbjct: 16 RFIGLDLGSKRIGVSICDERQSIATPFKTINKTNTNELIDELKIIIKDNNIGGIIVGNPV 75 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ A+ I + V L DERLSTV A + + +D Sbjct: 76 NMDGSLGRSAQSVNDVASNISKSIDLPVILWDERLSTVGAFNLSSLLDVNVSKRVKTIDQ 135 Query: 124 ASAVIILESYFE 135 +A IL+ + Sbjct: 136 NAAAFILQGAID 147 >UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Acetobacteraceae RepID=RUVX_ACICJ Length = 158 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 66/134 (49%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L+ D G+K IG+A+ A P A+K I + ++ +I+GL Sbjct: 16 NARLIGLDPGSKIIGIALSDVGRRLATPYGAMKRGKLAEAAATILDIARKEGAAALIIGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+ P AR +A+ I G+ V + DERLS+ L E RA G+V Sbjct: 76 PLSMDGSIGPAAQAARDWAHAIARETGLPVAMMDERLSSAAVNRALIEADVTRAKRAGRV 135 Query: 122 DSASAVIILESYFE 135 D+A+A +L+ + Sbjct: 136 DAAAASYMLQGALD 149 >UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI5_9FIRM Length = 156 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPA-IKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 LA D+G G+A P+ I+ + + ++ + + I+ GLP Sbjct: 2 KWLAVDYGDARTGLAGCDASETITSPITPQIEEKSMNKVAAAVTQVAVQRGAEGIVCGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NMDGTE A++R+FA R+ G V L DER +TV A + L + + K ++D Sbjct: 62 KNMDGTEGSRAAKSRRFAQRLANTAGRPVVLWDERRTTVSATAILADNDTFGQKRKARLD 121 Query: 123 SASAVIILESYFE 135 S SA +ILES+ Sbjct: 122 SVSAAVILESFLN 134 >UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCA5 Length = 147 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 6/139 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEW----QPDEIIV 59 L D G K+ G A+ A L ++ N I+ L+E Q DEII+ Sbjct: 4 LCLDLGKKTCGFAISDVNQTIAIGLENFFYEEYHFYEVINRIKYYLEESEFQGQVDEIIL 63 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 GLPL MD +E T +KFA + + ++L DER ST A + L + G K Sbjct: 64 GLPLRMDLSESKTTKMVKKFATVLAKNITLPIRLQDERQSTKNAEAILSQGGYNAKQKKL 123 Query: 120 KVDSASAVIILESYFEQGY 138 K DS +A +ILE Y E+ + Sbjct: 124 KKDSLAAQLILEDYLERQH 142 >UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLD1_9PROT Length = 168 Score = 142 bits (359), Expect = 4e-33, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 1/121 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+ DFGTK+IG+AV A P+ I+ + + D I L+ +VGLPL Sbjct: 18 RLMGLDFGTKTIGIAVSDAALRVASPVTIIRRRKFSEDAAEILALVGSRNIGGFVVGLPL 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGKVD 122 NMDGTE P R + R + DER+ST + E R K +D Sbjct: 78 NMDGTEGPRCQSTRDLTAELLLRHDLPTVFQDERMSTQAVERAMISEADLTRGQRKKSID 137 Query: 123 S 123 S Sbjct: 138 S 138 >UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGY5_RHOM4 Length = 145 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 6/140 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A D+GT+ +G+A+ + A+P +++RL E + +++G Sbjct: 1 MRPRVVAVDYGTRRVGLALADPLRVIAQPYGTYA---PEAALQVLQRLHAEEGIETLVIG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN-- 117 PL GTE T R +F R+ GV++ DER ++ A+ L E GG R Sbjct: 58 WPLTEAGTEGEATRRVERFIRRLRRLLPGVQIVRWDERYTSELAKERLREVGGPRKKRRD 117 Query: 118 KGKVDSASAVIILESYFEQG 137 KG++D +AVIIL+ Y EQ Sbjct: 118 KGRIDQMAAVIILQEYLEQQ 137 >UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Burkholderiales RepID=RUVX_RHOFD Length = 156 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 70/132 (53%), Gaps = 11/132 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 T LA DFG K G AVG R+ TA+P I A +G + I LKEWQPD ++VG+P Sbjct: 33 QTFLALDFGLKRTGFAVGNRLLRTAQPQGTIAA-EGDARFVKIALQLKEWQPDALVVGVP 91 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DG T RAR+FA ++ GRF + V DER +T EA R D Sbjct: 92 FHPDGAAHENTLRARRFARQLQGRFKLPVFEVDERYTTTEA--------LGRGARDA--D 141 Query: 123 SASAVIILESYF 134 + +A IILE + Sbjct: 142 AMAACIILEQFL 153 >UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJQ4_DESMR Length = 147 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 60/134 (44%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G +G+AV + A P I + + + +++E P I++G P Sbjct: 3 KILAIDYGQARVGLAVCAPGSEIAFPHSTIAWETRDDLFARLLAVIEEQNPGRIVIGYPA 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E + R FA R+ R V + DE ST EA L E G KVD+ Sbjct: 63 RAGGDEGLTGRQVRNFAARLARRTAVPLAYADEAHSTEEAAERLREAGLSGRELLAKVDA 122 Query: 124 ASAVIILESYFEQG 137 +A +ILE Y G Sbjct: 123 MAAAVILERYLRGG 136 >UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A648_GEMAT Length = 168 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 1/136 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT-PDWNIIERLLKEWQPDEIIVGL 61 G LLA D+G K IG+AV + A P I + G P I R + I GL Sbjct: 6 GRLLAVDWGDKRIGLAVSDELGMLASPAGVIARRAGKRPPIAEIMRQAEALGVSGYIFGL 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+ G E + R+ A ++ R + V+L DER +T A + EQGG KG V Sbjct: 66 PLDPGGDETDRSREVREVAGKLATRQPLPVRLVDERFTTSAALRSIREQGGSTRGRKGDV 125 Query: 122 DSASAVIILESYFEQG 137 D+ +A ++LE Sbjct: 126 DALAACVLLEGVLRAS 141 >UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BUR1_9PROT Length = 161 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G++LAFD G K GVAVG + T+R L +++ I++L+ EWQP +++GL Sbjct: 16 KGSVLAFDLGIKKTGVAVGNNVLKTSRNLVTFYSKNKNQRIEKIKQLVNEWQPIYLVLGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK-GK 120 P N D + T A I + + +E S+ A + + G + N Sbjct: 76 PSNRDSSANETTKFCLNTAKEIEKNINLPIFFVNENYSSTSAEELIKDLGNKKQKNNISL 135 Query: 121 VDSASAVIILESYFEQ 136 VD +A IIL+S+F + Sbjct: 136 VDQIAADIILQSHFNE 151 >UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0Z6_9DELT Length = 152 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 56/134 (41%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G +G+AV A P + Q + + ++ I+VG P Sbjct: 3 KILAIDYGQARVGLAVSDPEGRMAFPFATVAWQTRDALFRELLDVITSQGIAAIVVGYPA 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E + RKF R+ R + + L DE ST EA L E G +VD+ Sbjct: 63 RAGGDESLTGRQVRKFVARLSRRTDLPIVLVDEAHSTEEAAEQLREAGLSGPALSARVDA 122 Query: 124 ASAVIILESYFEQG 137 +A +IL Y G Sbjct: 123 QAAAVILTRYLRGG 136 >UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Desulfovibrio RepID=RUVX_DESVM Length = 142 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 60/130 (46%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+GTK GVA A P I + + + +E + + +VGLPL Sbjct: 4 LGIDYGTKRTGVAASDTGGSMAFPRRTIVMTTRDRFFAELLAVAEEERAEAYVVGLPLLH 63 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DGT+ T + R F R+ R + V L +E LS+ EA L + G + VD + Sbjct: 64 DGTDTLTTRQVRNFVERLKRRTTLPVYLMEEFLSSYEAEDDLRDAGLSGRALEAVVDQQA 123 Query: 126 AVIILESYFE 135 AV IL+S+ Sbjct: 124 AVRILQSFLN 133 >UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrobacter RepID=B8H9B9_ARTCA Length = 207 Score = 140 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 60/139 (43%), Gaps = 6/139 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GT +GVA+ R + A P + D +I +L +E ++IVG+ Sbjct: 22 GVKLGVDVGTVRVGVAICDRDSILATPYKTLDRNTKKNSDVRLIAKLAEELGAVQVIVGM 81 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P M G E A +A + V V + DERLS+V A L E G Sbjct: 82 PRTMKGEEHASARMASDYAGLLAAELAARGLDVPVNMVDERLSSVSAHRNLHEAGMSSRN 141 Query: 117 NKGKVDSASAVIILESYFE 135 ++ VD +A IL+ + Sbjct: 142 HRKVVDQVAAAGILQHAID 160 >UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wolbachia RepID=RUVX_WOLPM Length = 155 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 60/133 (45%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A + A ++ + D + R+ KE + +++GLPL Sbjct: 18 RIMCLDMGEKQIGIAFSDKTQLIATAHSIYHRKNMSKDLGYLHRIFKENESGSMVIGLPL 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 MD E +FAN+I ++ V + L DE ST A L G +K D Sbjct: 78 KMDEQETKWCKTIIQFANKIIKKYKVNIYLQDESFSTSIATHTLKITGISITKSKKIDDK 137 Query: 124 ASAVIILESYFEQ 136 SA IIL+ ++ Sbjct: 138 ISACIILQRTLDK 150 >UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX03_9PROT Length = 168 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 1/131 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+A D G K IGVAV R + R + + +D + ++++E+ ++ GLP Sbjct: 28 PLIALDIGMKRIGVAVCDRFGISCRGVTCLMRRDHG-WPQQLAKVVREYGAKSVVAGLPK 86 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE A AR + + V DERLST A+ L+ QG + K+D Sbjct: 87 NMDGTEGVQAADARAAVAELKKTLPLPVTFQDERLSTWTAKERLYAQGLREKKVQEKLDQ 146 Query: 124 ASAVIILESYF 134 +A +ILE + Sbjct: 147 TAAAVILEDFL 157 >UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG46_9BACT Length = 149 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D+G + +GVA G I A PL AI + L +E + + + G P Sbjct: 2 RCIGVDYGERRVGVAFGDDIG-VATPLQAIVKATEEERIQALVDLARERRATDFVFGYPY 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+G+ F +++ + V DERL++VEA ++ GK+DS Sbjct: 61 NMNGSVGFKAKEVDAFIDKLLKAIDLPVHRLDERLTSVEASKAFPKKRDDELRRSGKIDS 120 Query: 124 ASAVIILESYFEQ 136 +A +IL+ Y Q Sbjct: 121 VAASLILQDYLNQ 133 >UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B0A4_9BACI Length = 111 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 2/108 (1%) Query: 31 PAIKAQDGTPDW--NIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFG 88 I+ + ++ + + +++KE+ I+VGLP NM+GT P ++ FA + FG Sbjct: 2 ETIRISEEEKEFGFDQLGKIIKEYDVSTIVVGLPKNMNGTIGPRGEASQFFAGELERLFG 61 Query: 89 VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 + V L DERL+T+ A L E R K +D +A +IL+ Y + Sbjct: 62 LPVVLWDERLTTMAAERVLLEADVSRKKRKKVIDKMAASMILQGYLDS 109 >UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax=Bacteroidetes RepID=Q1VUW8_9FLAO Length = 137 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 6/138 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A DFG K G+A+ + A L ++ ++ ++++++E D ++VG Sbjct: 1 MKTKVIALDFGMKRTGIAISDEMKMIASGLRTVETRNL---MQELKKIIEEESVDTLVVG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN-- 117 P ++DG L F + F + +K DER ++ A + + G + Sbjct: 58 QPKHIDGKPMQLEKNILYFIEDVQALFPSLVIKRIDERFTSKMAFQTMIDSGLKKKQRQN 117 Query: 118 KGKVDSASAVIILESYFE 135 KG VD SA IIL++Y + Sbjct: 118 KGLVDEISATIILQNYLQ 135 >UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TLR6_PHYPA Length = 171 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 5/139 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEWQPDEIIVG 60 G LL D G+++IG+AV A P + + T + + +E L++E +++G Sbjct: 17 GRLLGLDVGSRNIGLAVSDPKCRIASPHSVMYRSNTTTLKNISRLESLVQEMNITGLVIG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIH--GRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 PL + G + A+ + FA + GRF + DERL++V + + Sbjct: 77 YPLELTGFQGKQGAQVKLFAKELQMSGRFPNLAYVYWDERLTSVAVTNVIGSMDITGRRR 136 Query: 118 KGKVDSASAVIILESYFEQ 136 K VD SA+ IL+ + Sbjct: 137 KNIVDKMSALCILQGCLDS 155 >UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVX_AZOPC Length = 138 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K G A+ + + ++ ++ + + + ++G P Sbjct: 2 GRIVAIDYGEKRTGFAISDPLKMIVSSFVTVLSRK---AVMYLKNCTENYDIELFVLGEP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 MD T R KF + ++V++ DER ++V A + E G + KG Sbjct: 59 RQMDYTPSENMPRVEKFKRNLRRVIPSIDVQMVDERFTSVLAHRIMIEGGVKKIKRQDKG 118 Query: 120 KVDSASAVIILESYFE 135 VD SA I+L++Y E Sbjct: 119 LVDRLSAAILLQTYLE 134 >UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mollicutes RepID=RUVX_MYCCT Length = 143 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 8/142 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD--WNIIERLLKEWQPDEII 58 M+ +++AFD G+K+IG+A A L I+ ++ D +E LK++ P I+ Sbjct: 1 MTQSIIAFDIGSKTIGLAYS--SGVIASSLDTIRFEEYNFDQGLKQLELYLKKYNPSIIV 58 Query: 59 VGLPLNMDGTEQPLTARA----RKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR 114 VG P NM+ T F + ++ DER +T A++ L + R Sbjct: 59 VGYPKNMNNTIGERAEMVDYVIEMFLDMYKSFNKDQIIKVDERRTTKIAKNILIQANLTR 118 Query: 115 ALNKGKVDSASAVIILESYFEQ 136 K DS +A +ILE Y E Sbjct: 119 EKQKKYKDSLAAQLILELYLES 140 >UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9D9_9GAMM Length = 121 Score = 138 bits (349), Expect = 6e-32, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 73/119 (61%) Query: 18 AVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARAR 77 AVG GT +PL ++A+DG PDW + L KEW+PD +++G PLNMDGT RAR Sbjct: 2 AVGNSALGTTQPLAILRARDGQPDWTQVAALCKEWEPDLLLIGDPLNMDGTVSDFAQRAR 61 Query: 78 KFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 KFA R+ GR G+ V++ DERLS+ E + E G ++ VD +A +IL+ + Q Sbjct: 62 KFARRLEGRLGIAVEMVDERLSSFEVKQQQREAGHSGDYHESPVDDLAAELILKDWLRQ 120 >UniRef50_D1AX73 Holliday junction resolvase YqgF n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX73_STRM9 Length = 142 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 4/134 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G IGVA + A I + T + I+ ++ + +++GLP Sbjct: 5 LGLDIGDVRIGVAKSDGLAMFASSYEVIDR-NITDPFERIKEIINSEKVIALVLGLPKTK 63 Query: 66 DGTEQPLTARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFE-QGGYRALNKGKVD 122 DG + +F + + + + DER +T EA L + VD Sbjct: 64 DGQNSIQVEKIERFVSELKLFIPENLPIHYIDERYTTKEAEYYLKNFSKKNGKERRKVVD 123 Query: 123 SASAVIILESYFEQ 136 +A IIL+++ ++ Sbjct: 124 MVAAQIILQNFLDK 137 >UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC39_PLALI Length = 199 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 29/161 (18%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+G K +G+A+ A P+ + + + D + +++ ++VGLP Sbjct: 27 GCLLGVDYGQKRVGLAISTFEQTLAMPMEIYQRKSESVDREWFKATCLDYRVAGLVVGLP 86 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGG---------- 112 L+ G E L+ R+F + + ++ DER ++V A +++ G Sbjct: 87 LHTSGEESELSREVRQFGEWLARCTNLPLRFWDERYTSVSAELLMWQDGVFPRSGNKPAS 146 Query: 113 ----------------YRALNK---GKVDSASAVIILESYF 134 RA K VD +A +IL ++ Sbjct: 147 GRTSKKSPGAGHSSPQNRAKKKTPVSPVDKLAAHMILTAFL 187 >UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI08_9FIRM Length = 143 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 5/134 (3%) Query: 4 TLLAFDFGTKSIGVAVGQR---ITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +LA D+G G+A R +T P +KA++ + + KE + + I++G Sbjct: 2 KILAVDYGDSRTGLATCDRTEFLTTAITPQITLKARNKV--AARVCEVAKEIEAEMILIG 59 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPLNMDGTE A++RK A + G+ V++ DER +T A L E G Y + K Sbjct: 60 LPLNMDGTEGERAAKSRKLAKTVELWSGLPVRMWDERQTTCAAADLLDESGTYGSRRKEI 119 Query: 121 VDSASAVIILESYF 134 +DS SA +ILE Y Sbjct: 120 LDSVSATVILEDYL 133 >UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betaproteobacteria RepID=C4KC98_THASP Length = 168 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GT+L FDFG IGVA G+ TG A L + A+ + I RL+ EW+P ++VG+ Sbjct: 27 RGTVLGFDFGLARIGVASGELETGLASALTTVHAEANDARFAAIARLIAEWRPVALVVGI 86 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNKGK 120 P ++DG E LTAR R+FAN++HGR + V DERLS+V A + L E G K Sbjct: 87 PTHLDGREHELTARCRRFANQLHGRHALPVFTADERLSSVAAEAELAEAGRKDWRERKAA 146 Query: 121 VDSASAVIILESYFE 135 +D+A+A I+L+++ + Sbjct: 147 LDAAAARILLQTFLD 161 >UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCJ6_9ACTO Length = 162 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G + D GT +GV+ P+ + D + + +++ + E+IVGL Sbjct: 5 RGIRIGVDVGTVRVGVSRCDPDGILTMPVETLHRAPDLSDLDRLADIVRSYDAIEVIVGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P ++ G E ARK+A R+ V V + DER+++ +A + L G ++ Sbjct: 65 PRHLRGGEGISAKGARKYARRLKKLVPDVRVAMVDERMTSNQAHARLRASGIPEIEHRSV 124 Query: 121 VDSASAVIILESYFE 135 +D +A IILE E Sbjct: 125 IDQVAAQIILEQALE 139 >UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psychrobacter RepID=RUVX_PSYA2 Length = 177 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K +G+A+G +T TAR + +G PDW+ + ++K W +++VGLPLN Sbjct: 29 ILALDYGVKKMGMALGNSLTETARAFDILAMNNGQPDWDNLLGIIKVWGVAKVVVGLPLN 88 Query: 65 MDGTEQPLTARARKFANRIHGRF---GVEVK--LHDERLSTVEARSGLFEQGGYRALNKG 119 MDG+ L+ RA KFA R+ R + V L DERL++V AR +E G + Sbjct: 89 MDGSSSMLSKRAHKFARRLAHRIMEQHLPVIVSLCDERLTSVAAREIAWENGWIQNER-D 147 Query: 120 KVDSASAVIILESYF 134 +D SA I++ +YF Sbjct: 148 PIDDISACILMSTYF 162 >UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHC7_KYTSD Length = 161 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLK-EWQPDEIIVGLPLNM 65 A D G +GVA G A P+ + G + + +L++ E + ++VGLP ++ Sbjct: 4 AVDVGLARVGVASGDPDGVLATPVETVAVAPGLTALDRVVQLVRQEERSTGVVVGLPRHL 63 Query: 66 DGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E AR++A + R G V V L DERLSTV A G+ E G + ++D Sbjct: 64 DGHESTSAVEARRWATALASRLGPTVRVWLVDERLSTVAASRGMREAGVRAKEQRTRIDQ 123 Query: 124 ASAVIILESYFE 135 A+AV IL+ + Sbjct: 124 AAAVEILQMSLD 135 >UniRef50_D2NT33 Predicted endonuclease involved in recombination n=2 Tax=Rothia mucilaginosa RepID=D2NT33_9MICC Length = 187 Score = 136 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G + D G +G A+ A PL ++ D ++ +L++ + E+ VG Sbjct: 6 RGVRMGVDVGNARVGTALSDPDGILATPLKTLRRDAKKNSDRRVLRKLIEVNEVVEVFVG 65 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG------VEVKLHDERLSTVEARSGLFEQGGYR 114 LP M G + P T AR++A + + + L DERL+TV A L E G Sbjct: 66 LPKTMRGGDSPSTEMAREYAQALRSELDAEEKTHINIWLVDERLTTVSAHRALHEAGVSS 125 Query: 115 ALNKGKVDSASAVIILESYFE 135 K VD +AV IL+ + Sbjct: 126 RDFKTMVDQVAAVNILQYSLD 146 >UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTW9_9FLAO Length = 138 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G G+A + A L ++ + +++ E + DE+++GLP Sbjct: 2 GQILAIDYGKARCGIAATDDMQIIASGLETVENRSL---MEFLKKYFSENKVDEVVIGLP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 +++ G + KF F + V DER ++ A + + G + KG Sbjct: 59 IDLKGNISEVETDILKFIEEFKKEFSDIAVHRFDERFTSKMASFFISQSGKNKKKRQEKG 118 Query: 120 KVDSASAVIILESYFEQ 136 +D SA IIL+++ EQ Sbjct: 119 LIDKVSATIILQNFLEQ 135 >UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chlorobiaceae RepID=RUVX_PROA2 Length = 142 Score = 136 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 6/138 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+GTK IG+A + A+P+ + I+ + I++G PL Sbjct: 8 RIIAVDYGTKRIGLAKTDPLQLFAQPVGTF---SEEALFRAIKEISGLDGIGRILIGYPL 64 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KGK 120 N DG+ +T FA R+H F + ++L +E S+ A L G R KG+ Sbjct: 65 NADGSHNRMTDIVDAFAARVHNEFPDIPLELVNEHGSSRSAGQILINSGLSRKKRHEKGR 124 Query: 121 VDSASAVIILESYFEQGY 138 +DSASA ++L+++ ++ + Sbjct: 125 LDSASACVLLQAHLDKSH 142 >UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WSC3_RENSM Length = 169 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 6/140 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G L D GT +GVAV A PL A++ D II + E I VG Sbjct: 9 RGVRLGVDVGTVRVGVAVCDPDGILATPLRAVQRDAKRNSDLRIIVKEALERDAITIYVG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRA 115 LP + GTE AR A ++ EV+L DERLS+V A L G Sbjct: 69 LPQTLRGTESGSAELARAIAGQLADLLVQSDSAAEVRLIDERLSSVSAHQQLRSAGMAGR 128 Query: 116 LNKGKVDSASAVIILESYFE 135 + +D +A IL+ E Sbjct: 129 EQRKVIDQVAAAGILQHALE 148 >UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCAP Length = 146 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 5/137 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKA--QDGTPDWNIIERLLKEWQ--PDEIIVGL 61 L+FD GTK+ G A+ + +A L I+ D ++ ++K +Q D ++G Sbjct: 4 LSFDLGTKTCGFAISDILEISANALETIRFVENDFNAVIVKVKEIIKMYQNSIDAFVLGY 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PL +G++ T FA + F G+ + L DE ST++A+ L + K K Sbjct: 64 PLRSNGSKSERTMMVDNFAILLANEFPGINIYLVDEYGSTIKAQRILKDAKLSNKKTKSK 123 Query: 121 VDSASAVIILESYFEQG 137 D+ SAVIIL + + G Sbjct: 124 KDTVSAVIILNDFLQYG 140 >UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Actinomycetales RepID=RUVX_MYCBP Length = 170 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G IGVA A P+ ++ + L E + E+IVGL Sbjct: 21 RGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRSGKHLRRLAALAAELEAVEVIVGL 80 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P + A + A + R V+L DERL+TV A+ L + G + + Sbjct: 81 PRTLADRIGRSAQDAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAV 140 Query: 121 VDSASAVIILESYFEQ 136 +D A+AV IL+S+ ++ Sbjct: 141 IDQAAAVAILQSWLDE 156 >UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6Z7_9GAMM Length = 134 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 8/131 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G + GVAVGQ +T TA+PL ++ + ++EW I++GLP Sbjct: 5 WILALDVGQRKTGVAVGQSLTQTAKPLAVLRHPAQQLEAAHFAAWVREWSVSHIVIGLPK 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E PL A R+ + FG+ V DE LS+ EAR+ L + +VD+ Sbjct: 65 LRDGKEHPLAAPIRRIGAKCQEAFGLPVHYIDEYLSSHEARARL--------PGEKEVDA 116 Query: 124 ASAVIILESYF 134 +A II E + Sbjct: 117 MAAAIIAEDWL 127 >UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Actinomycetales RepID=RUVX_MYCA9 Length = 166 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 2/137 (1%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G L D GT IG++ A P+ + D+ I L++E E++VG Sbjct: 19 RGRRLGVDVGTVRIGISSSDPDGILATPVETVSRDAKEDSDFRRIAELVEEMSVVEVVVG 78 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP N+ A FA + R V V+L DER +T A+ L E G +G Sbjct: 79 LPRNLREGTGSSARDAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQQRG 138 Query: 120 KVDSASAVIILESYFEQ 136 +D A+AV IL+ + EQ Sbjct: 139 IIDQAAAVAILQDWLEQ 155 >UniRef50_B3ETT5 Putative Holliday junction resolvase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=RUVX_AMOA5 Length = 141 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K +G++V + A PL + A D ++ +K+ + +VG P Sbjct: 2 GRIMAIDYGLKRVGLSVTDPLQIIASPLTTVAANDT---LTFLQTYVKKENVEAFVVGYP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 ++ P+ +F + F ++ HDER ++ A + L E G + K Sbjct: 59 TDIKDKNTPIIVAISQFIELLQRNFPDQQIFQHDERYTSKLAAASLVEGGFKKKDRRNKE 118 Query: 120 KVDSASAVIILESYFEQ 136 +D SA IIL+S+ Sbjct: 119 NLDKLSATIILQSFLSS 135 >UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bifidobacterium RepID=RUVX_BIFAA Length = 151 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGLP 62 L D G +G+A+ A P+ I+ D + + ++ + D +++GLP Sbjct: 2 VWLGIDLGDARVGLALSDPELTLAHPIGNIQVYGDSFRALDEVIDVIGDESVDHVVIGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG------------VE-VKLHDERLSTVEARSGLFE 109 L ++G E +AR+++ + R V ++L DERL+TV A LF+ Sbjct: 62 LLLNGEEGKSAKKARRWSVNLEKRLHAAVEDESYSVTRVPTIELVDERLTTVTAHHQLFD 121 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQG 137 ++ VD SAV+IL++ ++ Sbjct: 122 ARIGGRKHRPMVDQQSAVVILQTALDRS 149 >UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Acholeplasmataceae RepID=RUVX_AYWBP Length = 151 Score = 132 bits (334), Expect = 3e-30, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAI--KAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G K++G+A+ Q A+ L I +++++ ++Q +II+G P Sbjct: 10 LGLDLGEKTLGIALSQT-GIIAQNLKTIFFDTHKYDQLIAPLQKIISQYQIKKIILGYPK 68 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +M+ + F + +FG V+V L DERLSTV+A L + D Sbjct: 69 HMNNDIGIKAKISNYFKKTLENKFGQVKVILWDERLSTVQAIQILKTNNKKKGKILQMKD 128 Query: 123 SASAVIILESYFE 135 +A IIL++Y + Sbjct: 129 EIAASIILQNYLD 141 >UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Mycoplasma mobile RepID=RUVX_MYCMO Length = 144 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD--WNIIERLLKEWQPDEIIVGLPL 63 L D G G A+ + PL ++ + I+++L E+Q D I++GLP+ Sbjct: 4 LGIDLGKIRTGFAISDDSNKISLPLKTFIQKNANFNNIILEIKKILLEYQIDTIVIGLPI 63 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ + T F + + + +E S+V A + E K VD Sbjct: 64 KINNEKTKSTIFVENFKKHLEKEINLPIFFVNEYNSSVLANLSINEM--KSKKRKTIVDK 121 Query: 124 ASAVIILESYFEQGY 138 SA IIL + + Sbjct: 122 ISAQIILNDFLNNYF 136 >UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mobiluncus mulieris RepID=C2KQ01_9ACTO Length = 145 Score = 131 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 9 DFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGT 68 D G +G+A T A P+ +K Q + + ++E + VGLP ++G Sbjct: 2 DVGKVRVGIAQAYLDTILALPVKTLKVQADGSELEELASFIREETTTAVFVGLPRLLNGK 61 Query: 69 EQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAV 127 E AR +A R+ + + V+L DERLS+V A L G +K VD +A Sbjct: 62 EGEAARMARSYARRLARKISPIPVRLIDERLSSVTAHEKLRAAGVSTREHKKMVDQVAAQ 121 Query: 128 IILESYFEQG 137 ILE E Sbjct: 122 QILEQAIEMS 131 >UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opitutaceae RepID=RUVX_OPITP Length = 145 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 2/136 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+GT+ IG+A G + A PLPA+ D W + ++ + +++VG PL Sbjct: 2 RCLGIDYGTRRIGLAYGDELG-VATPLPALVEADPAKRWQSLLATARQRRVTDLVVGHPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NMD T P A A R+ GV+V L DERL++ EA + + + G +D Sbjct: 61 NMDDTAGPKAKEAEAVAARLRTELAGVDVHLVDERLTSYEAEATISKTQRRAVRASGVID 120 Query: 123 SASAVIILESYFEQGY 138 S +A +IL+ + +Q + Sbjct: 121 SRAATLILQDFLDQRF 136 >UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma gallisepticum RepID=RUVX_MYCGA Length = 142 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 7/135 (5%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPD-----EIIVG 60 +A D G++++G+A G A P I D+ LKE + ++G Sbjct: 4 VALDVGSRTLGIATGDGEFKIASPYCVISF--NQYDFRQCLAELKEKTASFFYDFKFVIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 +P N+D T+ T F + + EV ++DE +++ A L + K K Sbjct: 62 MPKNIDQTKSSTTEMVENFIELLKANYKNEVIIYDESYTSIIADQLLIDNQIKAKKRKEK 121 Query: 121 VDSASAVIILESYFE 135 +D +A +IL+S+F+ Sbjct: 122 IDKLAAFVILQSFFD 136 >UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Dehalococcoides RepID=RUVX_DEHSC Length = 133 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Query: 11 GTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQ 70 G K IG A+ + A PL ++ D T IE L+K QPD +I+GLP++++GT Sbjct: 2 GDKWIGAALSDPLRILASPLVILRRDDDTKTLENIESLVKTHQPDLLIIGLPISLNGTIG 61 Query: 71 PLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIIL 130 P + + F+ + +E+ DER ST EAR + + G + +A +IL Sbjct: 62 PQAEKVKSFSELLSRHLNIEIIYRDERFSTDEARRKMNDSGKNNKTVRDDAAAA--AVIL 119 Query: 131 ESYFEQ 136 + Y ++ Sbjct: 120 QDYLDE 125 >UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4E9_JONDD Length = 167 Score = 129 bits (326), Expect = 3e-29, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-------------DWNIIERL 48 G L D G +GVA T A P+ + D + + Sbjct: 6 RGVRLGVDVGQVRVGVAACDPDTILATPVETLARDRSVSYVAGGKVPSVLPTDIEDLREI 65 Query: 49 LKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGL 107 +E + VGLP ++ G A +A+ + +EV+L DERL++ A S L Sbjct: 66 AEERLAVAVYVGLPKHLSGARGVSAEMAVNYASLVQRVLPHLEVRLVDERLTSKTAHSAL 125 Query: 108 FEQGGYRALNKGKVDSASAVIILESYFE 135 + G ++ +D A+AV+IL++ E Sbjct: 126 HDAGRRAREHRTVIDQAAAVVILDTALE 153 >UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMQ4_9FLAO Length = 132 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 6/131 (4%) Query: 9 DFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGT 68 D+G K G+AV + A L ++ + + +E + E Q + I++G P MD + Sbjct: 2 DYGQKRTGIAVTDPLQMIASGLTTVQTPEL---LDFLESYMGEEQVERIVIGEPRRMDNS 58 Query: 69 EQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGG--YRALNKGKVDSAS 125 + A R F RI RF + + DER S+ A + E G + +K VD S Sbjct: 59 PSGIEAEIRSFIERIKKRFPDLPLSRQDERFSSQMAVRAMIEGGMKKKKRRDKAAVDKIS 118 Query: 126 AVIILESYFEQ 136 A +IL+SY Sbjct: 119 ATLILQSYLSS 129 >UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candidate division TM7 RepID=A5KT02_9BACT Length = 138 Score = 128 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +++A D GTK IG+A P ++ + ++ E +P IIVG P Sbjct: 7 SVIALDVGTKRIGIAHADTAVRFPVPYGTLEVDGLE--IERLREIIAELEPSLIIVGYPR 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 N G T ++FA ++ F +++ DE L++V A L Q + K +D+ Sbjct: 65 NQQGEPTAQTGVVKEFAQKLE-PFQIDILFQDESLTSVLAEKYLQSQN--KPYTKSDIDA 121 Query: 124 ASAVIILESYFEQGY 138 +A IIL Y E+ Y Sbjct: 122 HAAAIILGDYLEEAY 136 >UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3186B Length = 133 Score = 128 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G+ G A+ A P+ ++ + L+++ + D ++VGLPL Sbjct: 2 RVLALDYGSARCGCALSDPTGTLATPIAHVERPGTRKGMARLVALVRDREVDRVVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + G + TA R FA R+ G + + L+DER +TV A GG + Sbjct: 62 GLSGADTAQTAEVRAFAQRLGEALGEQIPIDLYDERFTTVIAERV----GGRESE----- 112 Query: 122 DSASAVIILESYF 134 DS +A ++LE + Sbjct: 113 DSRAAAVLLEGWL 125 >UniRef50_B8ZUJ7 Putative Holliday junction resolvase n=16 Tax=Actinomycetales RepID=RUVX_MYCLB Length = 184 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G+ IGVA A P+ ++ + L+ E Q E++VGL Sbjct: 25 RGRRLGIDVGSVRIGVAFSDPDGILATPVETVRRYRSAKHLRRLAELVVELQVVEVVVGL 84 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P + A A + R V V+L DERL+TV A+ L G + Sbjct: 85 PWTLTDRTGSSAKDAIDTAEALARRVAPVPVRLVDERLTTVSAQRLLRAAGVRAKDQRAV 144 Query: 121 VDSASAVIILESYFEQ 136 +D A+AV+IL+++ +Q Sbjct: 145 IDQAAAVVILQNWLDQ 160 >UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9W8_9SPIR Length = 141 Score = 128 bits (323), Expect = 6e-29, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A PL I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGVDFGRKKTGTAFMDMNIKIPFPLLLIEESNAKKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E + R+F++ + V V DE ++ EA L G + + K D Sbjct: 62 DEGKESEWCSEIRRFSDFLLKSVKVNVVFVDEYGTSKEADYILR--GRKKNVKKKANDLI 119 Query: 125 SAVIILESYFE 135 +A +ILE+Y Sbjct: 120 AAALILENYLN 130 >UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Mycoplasma pulmonis RepID=RUVX_MYCPU Length = 146 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 3/134 (2%) Query: 6 LAFDFGTKSIGVAVGQRITG-TARPLPAIKAQDG--TPDWNIIERLLKEWQPDEIIVGLP 62 +A D GTKS G A+ I+ A PL ++ N ++ K+++ D II+G P Sbjct: 8 IALDLGTKSCGFAISDPISNSFAIPLENFFFEENNFKKVINKLKHYEKKYEFDTIILGYP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L M GT + +F + F + L DERLSTV+A++ L E ++ K K D Sbjct: 68 LRMTGTRSERSIMVEEFEKLLRKTFSQRIVLVDERLSTVKAKAMLKETNISQSKIKEKKD 127 Query: 123 SASAVIILESYFEQ 136 S +A ++L Y Sbjct: 128 SMAAALLLNYYLNN 141 >UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR Length = 254 Score = 128 bits (322), Expect = 7e-29, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 6/135 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G GVA+ T RPL ++ + + + + + + DE I+GLP Sbjct: 89 GFSLGVDLGLSRSGVALS--KGFTVRPLTVLELRGQKLEL-RLLEIAENEEVDEFIIGLP 145 Query: 63 LNMDGTEQPLTARARKFANR---IHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 + DG E P + + R A R + G V L DE ++ EA + + + G ++ + Sbjct: 146 KSWDGKETPQSNKVRSVAGRFAVLAAHRGWRVYLQDEHGTSTEATNRMIDMGLNKSTRQK 205 Query: 120 KVDSASAVIILESYF 134 KVD+ +AV++LE YF Sbjct: 206 KVDAYAAVMVLERYF 220 >UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Micrococcineae RepID=D1BSM1_XYLCX Length = 184 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 6/140 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-----DGTPDWNIIERLLKEWQPDE 56 G L D G IG+A A P+ + + D I + E Sbjct: 28 RGARLGVDVGKARIGLAASDPDGLIATPVETVARVLDATGTDSADVRAIAEAVGERFAAV 87 Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA 115 + VGLP ++ G E TA AR FA R+ V V++ DER+STV A S L G Sbjct: 88 VYVGLPRHLSGKEGAATADARAFATRLALAVAPVPVRMVDERMSTVTATSQLRAAGKKSK 147 Query: 116 LNKGKVDSASAVIILESYFE 135 ++ +D A+AVIIL+S + Sbjct: 148 SHRPVIDQAAAVIILQSALD 167 >UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Prochlorococcus marinus RepID=RUVX_PROM0 Length = 153 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 4/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L+ D G+K IG+A + T+ LPA+K + + II + E+ IVG+PL Sbjct: 10 SILSLDIGSKRIGLAYCDPLCITSNILPAVKRFENNQEIKIIRNYINEFNLTGFIVGIPL 69 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + + + + +E ST E+ G + G +DS Sbjct: 70 DEKGKMTTQAIDCKNYGQLLSNELKLPFSYVNEHSSTWESSERF----GIKKDKSGLIDS 125 Query: 124 ASAVIILESYFEQG 137 SA IILE + E+G Sbjct: 126 FSAKIILEQWIEEG 139 >UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrichaceae RepID=D2MPX3_9FIRM Length = 140 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 3/133 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQD--GTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G+ + GV+ + A + I+ ++ + + +++ +PDEI++G PL Sbjct: 5 LGLDLGSVTCGVSASET-GLIAHTVETIRFKNEDYNEAMDKVLAIIEREKPDEIVLGYPL 63 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++G P + +F + G+ V L DER +TVEA L + R K K+D Sbjct: 64 LLNGDVGPRAQLSEEFKEVLEEECGLPVHLMDERFTTVEAEEILLQADISRKKRKKKIDQ 123 Query: 124 ASAVIILESYFEQ 136 +AV IL+ Y ++ Sbjct: 124 LAAVQILQYYLDR 136 >UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylobacterales RepID=D1B1D4_SULD5 Length = 135 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 6/132 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + + D G K IGVA+ +G P AI ++ ++ L EW+ + ++VGLP Sbjct: 3 KIASLDVGLKRIGVALC-LASGIVTPQEAILRKNRDQAAREVDAFLTEWEIELLVVGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +E+ + R F + + F EV DE S++EA+ + QG R GK+DS Sbjct: 62 G-GSSEEEMKRRITHFVSLLA--FSGEVVYQDEYGSSLEAKEMM--QGIMRQKRDGKIDS 116 Query: 124 ASAVIILESYFE 135 +A +ILE Y + Sbjct: 117 IAAKVILERYLD 128 >UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aquificaceae RepID=RUVX_AQUAE Length = 131 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+GTK +G+A+G P + +++ I+ ++++ + ++IVGLPL Sbjct: 2 KVLAVDYGTKRVGLAIGDEELKIVSPKGTVSSKE---AVKKIKEIVEKSRVGKVIVGLPL 58 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 G E + F ++ E+ L DER +T EA L +G K D Sbjct: 59 TPSGKEGQRAKLVKDFVEKLREELPNTEIILWDERWTTAEAMRRL--EGLPPKKKKELKD 116 Query: 123 SASAVIILESYFEQ 136 SA+IILE Y Sbjct: 117 VISAMIILEEYLNS 130 >UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEP3_XANAL Length = 165 Score = 125 bits (314), Expect = 6e-28, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+L FD G + IGVAVG R AR L I PDW ++RL +W+P ++VG P Sbjct: 21 GTVLGFDVGHRRIGVAVGSRFGSGARALAVIDVHAQGPDWPALDRLHAQWRPHGLVVGDP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL---FEQGGYRALNKG 119 L +DG +QP RA FA + R+ + V L DER S+VEA G R + Sbjct: 81 LTLDGADQPNRKRAHAFARELGARYCLPVVLVDERSSSVEAAQRFAVDRAAGRKRRRDAD 140 Query: 120 KVDSASAVIILESYF 134 +D+ +A +I+E + Sbjct: 141 ALDALAAAVIVERWL 155 >UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5Y4_VITVI Length = 679 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 6/135 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G G+A+ + RPL +K + + + + + DE I+GLP Sbjct: 510 GFSLGVDLGMSRTGLALS--KGFSVRPLSVLKLRGQKLELQ-LLEIAGREEVDEFIIGLP 566 Query: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 ++ DG E P + + R A R+ R G V L DE ++ EA S + + G ++ + Sbjct: 567 VSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSEEALSLMIDMGHSKSARQN 626 Query: 120 KVDSASAVIILESYF 134 ++D+ +A+++LE YF Sbjct: 627 RIDAYAAMMVLERYF 641 >UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma penetrans RepID=RUVX_MYCPE Length = 142 Score = 124 bits (313), Expect = 9e-28, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 5/137 (3%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 ++ +LA DFGTK IG A+ P I + + I +++E EI++G Sbjct: 4 LNSKILAIDFGTKIIGTAINDINLNLCLPYCEI--TNNELKFKKILEIVEEENIKEIVIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 P + F N++ +E+ DE ST ++ L + Sbjct: 62 FPKTQNSYVSERHQLIIDFKNQLSELLKNKNIEICFFDESYSTKSSKESLMNFNVKTSKL 121 Query: 118 KGKVDSASAVIILESYF 134 K D +A IILE+Y Sbjct: 122 KKNKDMIAASIILENYL 138 >UniRef50_C6X127 Putative Holliday junction resolvase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X127_FLAB3 Length = 141 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G G+A A L ++ ++ + + + ++VGLP + Sbjct: 7 ILAVDYGKARCGIAATDDFQIIASGLDTVETKNI---FTFLAGYFAANNVELVVVGLPTD 63 Query: 65 MDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KGKV 121 + G + KF + +F V+ + DER ++ A + + G + KG + Sbjct: 64 LKGNLSSIETDIAKFLEKFKTQFPTVKTERFDERFTSKMASFYISQSGKNKKKREEKGLI 123 Query: 122 DSASAVIILESYFEQ 136 D SA +IL+++ EQ Sbjct: 124 DKVSATLILQNFLEQ 138 >UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=Thermaceae RepID=RUVX_THET2 Length = 135 Score = 124 bits (312), Expect = 9e-28, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 1/131 (0%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMD 66 A D G IG+AVG+ A + + D + ++ +++VGLPL D Sbjct: 5 ALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPLRTD 64 Query: 67 GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASA 126 E + + R GVEV+L DER +T A+ L +KGK+D +A Sbjct: 65 LKESAQAGKVLPLVEALRAR-GVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDELAA 123 Query: 127 VIILESYFEQG 137 V++LE Y +G Sbjct: 124 VVLLEDYLARG 134 >UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Chlamydiaceae RepID=RUVX_CHLFF Length = 150 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 3/136 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+G + IG+A + P+ I+A + + +++ E + +++G P+ Sbjct: 10 FLGVDYGQRRIGLAYAASPLFISLPIGFIEAGKTLEATAQSLAKIILEREVSCVVLGNPI 69 Query: 64 NMD-GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGKV 121 M G + L K ++ I V+V L DERLS+ +A L + G R KGK Sbjct: 70 PMQIGQKSSLQEEILKISSLIQEFCHVDVVLWDERLSSAQAERMLKCDCGLSRKQRKGKT 129 Query: 122 DSASAVIILESYFEQG 137 DS +A +IL ++ E Sbjct: 130 DSVAATLILTNFLESS 145 >UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Q1_9ACTN Length = 119 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 57/111 (51%) Query: 26 TARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHG 85 A P+ + A + T L+++++PD ++ G PL M G P R A +I Sbjct: 1 MAMPVKVLPAAEVTGMAKTFRYLVEDYEPDILVSGRPLTMAGEPGPQAERVAAVAQKIAD 60 Query: 86 RFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 + ++ DERLS+ EA+ L EQG +GK+D +A + L+++ ++ Sbjct: 61 ELDLPLEFEDERLSSQEAKRILREQGLNEKQMRGKIDMIAASLFLQTWLDR 111 >UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=C5EZY4_9HELI Length = 135 Score = 121 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 4/132 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++A D G K IG+A Q + PLP I ++ + L++ P +++G+P Sbjct: 2 QNIIALDIGLKRIGIA--QFLQNIPIPLPPILRKNRNQAARDVSNLIQMKNPQILVIGIP 59 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + D + + R + F N + G+E+ DE S+ EA + + G +D Sbjct: 60 QDGDSSL-EMERRIKHFINLLEIPKGIEICFIDESFSSFEALQKM-QGSKKNKKKDGSLD 117 Query: 123 SASAVIILESYF 134 S +A+IILE Y Sbjct: 118 SLAALIILERYL 129 >UniRef50_C8XD23 Holliday junction resolvase YqgF n=2 Tax=Actinomycetales RepID=C8XD23_NAKMY Length = 169 Score = 121 bits (305), Expect = 7e-27, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 13/147 (8%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ------------DGTPDWNIIERLL 49 G L D GT +GVA A P+ ++ + T D + + L+ Sbjct: 15 KGVRLGVDVGTVRVGVARSDPAGILATPVTTLQRSAAPSSGKSGDRAEPTADLSALRDLV 74 Query: 50 KEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLF 108 E E++VGLP + G E AR + + V V DERL+TV A L Sbjct: 75 VEHDVVEVVVGLPTTLRGMEGSAVTAARAYGQALAALIAPVPVVYVDERLTTVTADRVLA 134 Query: 109 EQGGYRALNKGKVDSASAVIILESYFE 135 + G + VD +A IL++ + Sbjct: 135 QAGIKGKARRAVVDQVAATRILQNRLD 161 >UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV16_ORYSJ Length = 237 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G GVAVG+ IT RPL +K + + ++ + ++ + DE+IVGL Sbjct: 73 CGFSLGVDLGEARTGVAVGRGIT-LPRPLTVLKLRGQKLEL-MLLDIAQQQEADELIVGL 130 Query: 62 PLNMDGTEQPLTARARKFANRIH---GRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 P++ DG+E P + + R R+ G+ V L DE +T++A + +G R+ Sbjct: 131 PVSADGSETPQSNKVRSVVGRLAVQAADRGLRVYLQDEYGTTIDALEFMISRGVKRSARD 190 Query: 119 GKVDSASAVIILESYFEQG 137 K D+ SA++ILE YF Sbjct: 191 VKSDAYSAMMILERYFSSS 209 >UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax=Epsilonproteobacteria RepID=A6DAL6_9PROT Length = 130 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D G K IG+A PL AI ++ + LLKE++ D ++VG+P Sbjct: 3 RIIAIDVGLKRIGIAYT-PNASVVVPLNAIIRKNRNQAAKEVSNLLKEYKADILVVGIPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 T + +T R + F N I F +++ DE ++ + G + G++DS Sbjct: 62 ----TNEEMTKRIKHFTNLID--FNGKIEFVDESFTSAIVEEEIK--GKIKHKRDGRIDS 113 Query: 124 ASAVIILESYF 134 +A ILES+ Sbjct: 114 LAAKKILESFL 124 >UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXP5_DICNV Length = 129 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 8/136 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L D GT GVA+GQ +TG A+PL + L+++W+ + I++G Sbjct: 1 MVQWVLGIDVGTYHTGVAIGQSVTGLAKPLQRFNLPLKQVHADTFSALVQQWKVNCIVIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP DG + PL+ + A+ +GV V DE L++ A+ + ++K Sbjct: 61 LPSLADGKKHPLSDEIHRLADECIKLYGVPVHFIDETLTSHAAQMRF-----PKTIDK-- 113 Query: 121 VDSASAVIILESYFEQ 136 DSA+A +I+E + Sbjct: 114 -DSAAAAVIVEDFLSS 128 >UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYT3_ACIFD Length = 138 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 4/132 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D GTK IGVAV + A PL I A+ P + L+ ++VGLP Sbjct: 7 GRALGVDLGTKRIGVAVAE--GSLALPLEVIDAR--GPWRARLAELVASVGASVVVVGLP 62 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + +DG+E AR R+++ + V V DERLS+ A L G +G VD Sbjct: 63 IGLDGSEGRAAARVRQWSEGLAEHLEVPVVFVDERLSSQAAERRLGAAGVDARSRRGAVD 122 Query: 123 SASAVIILESYF 134 + +A ILE + Sbjct: 123 AFAATEILERWL 134 >UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8L7_COPPD Length = 137 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 4/131 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++A DFG K IG+A A P ++ D + LK+ P +++GLP N Sbjct: 2 IVAVDFGLKRIGMARSDDSETWAFPHKTLEGNDLET---KLIIELKKIGPRVVVLGLPRN 58 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE + R R+ G V DERL++ +KGKVD Sbjct: 59 MDGTEGEMAVAVRALGQRLED-VGFTVDFWDERLTSRLVSRQDPRSLKKAIKDKGKVDLM 117 Query: 125 SAVIILESYFE 135 SAV+IL+ Y Sbjct: 118 SAVLILQEYIN 128 >UniRef50_D0J8Y2 Holliday junction resolvase-like protein n=2 Tax=Blattabacterium RepID=D0J8Y2_BLASP Length = 141 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 5/133 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D+G G+++ + A L AI ++ + + L+ + +I++GLP Sbjct: 3 RILGIDYGKVITGLSITDPLQKFAFGLNAIPTKNL---MSFLAILIAKKPIKKIVIGLPK 59 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN-KGKV 121 ++ + + F ++ H + + + DER ++ A S + E G + KG + Sbjct: 60 TLNNKNALIEKSIQNFISKFHKKNPKIRIVRIDERFTSKIAFSTMIELGLKKKRRQKGLI 119 Query: 122 DSASAVIILESYF 134 + SA IIL+SY Sbjct: 120 NKISATIILQSYL 132 >UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Campylobacterales RepID=RUVX_SULDN Length = 130 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 6/131 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G K IG+A PL A++ ++ +++ L EW+ D ++VG+PL Sbjct: 4 IAIDLGLKRIGLAYS-AHKDLVTPLKAVERKNRDQAARDVKKTLIEWEVDAVVVGIPLG- 61 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 +E + R F N + F E+ DE S++EA S + G + + G++DS S Sbjct: 62 GSSEDEMRRRVAHFMNLVA--FEGEIFYQDESNSSIEAESMMR--GEIKYIRDGRIDSIS 117 Query: 126 AVIILESYFEQ 136 A+IIL+ Y Q Sbjct: 118 AMIILQRYLRQ 128 >UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ureaplasma RepID=RUVX_UREP2 Length = 147 Score = 118 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 9/142 (6%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAI--KAQDGTPDWNIIERLLKEW--QPDEIIVGL 61 LA D GTKS G A+ + A L + D T I+ ++ + + D I++G Sbjct: 4 LALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVLGY 63 Query: 62 PLNM-DGTEQPLTARARKFANRIHGRF----GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P N+ DG++ T F + F +++ DER ST A L A Sbjct: 64 PTNVYDGSKNERTYLIESFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKAAK 123 Query: 117 NKGKVDSASAVIILESYFEQGY 138 K D SAV+ILESY + + Sbjct: 124 IKKVKDKMSAVVILESYLSKNH 145 >UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LQC7_PICSI Length = 178 Score = 118 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD--WNIIERLLKEWQPDEIIV 59 +G LL D G + +G+AV + A P + + D + ++ L++ + ++ Sbjct: 21 TGRLLGMDVGDRYVGLAVSNHLNEIASPHSVLIRKQSNIDSITDKLQELVRRFSLVGFVI 80 Query: 60 GLPLNMDGTEQPLTARARKFANRIHG--RFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 G PL + ++ + + F ++ RFG + DERL+T S L + Sbjct: 81 GYPLPLYHFQRSQAMQVKMFVEQLQKTGRFGCLNYTYWDERLTTRAVESMLKPLKIHPLQ 140 Query: 117 NKGKVDSASAVIILESYFEQ 136 K +D +AV IL+ + + Sbjct: 141 MKHMMDKFAAVGILQDFLDN 160 >UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Salinibacter ruber DSM 13855 RepID=RUVX_SALRD Length = 143 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D GTK +GVAV + A+P ++++ L I+VG PL Sbjct: 9 RVVGIDVGTKRVGVAVADPLRLFAQPHGTYA---PDEALDVLQALRDADGIARIVVGWPL 65 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGY--RALNKGK 120 +GT + T + RI G VEV DER ++ A+ L E G +KG+ Sbjct: 66 TEEGTAEEATEMVEAYVERIREALGTVEVAREDERYTSEIAKDLLREAGVSQPGRYDKGR 125 Query: 121 VDSASAVIILESYFEQ 136 VD+A+A +IL+ + + Sbjct: 126 VDAAAAAVILQGFLNR 141 >UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XG67_MEIRU Length = 136 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D G IG+AVG+ + A + ++ D + + + + +VGLPL Sbjct: 2 RVVALDVGEARIGLAVGEIGSPWAFGRGYLVRKNLEADLEALAAFAERERAERFVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG R + + R G++++L DER +T ++ L KGK+D Sbjct: 62 RTDGRPSAQAERVQALVEAMRER-GMQLELLDERYTTKLGQNRLKHAPKRIRQEKGKLDE 120 Query: 124 ASAVIILESYFEQ 136 A+A+ +LESY + Sbjct: 121 AAAIALLESYLAR 133 >UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=B6BIR6_9PROT Length = 131 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 6/129 (4%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G K IG+A PLPAI ++ +++ LKEW+ D +++G+PL Sbjct: 4 IAIDLGLKRIGLAYS-AHKDLVTPLPAIMRKNRNQASAEVKKALKEWEVDAVVIGVPLG- 61 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 +E + R F N + F E+ DE S++EA + + G + + G++DS S Sbjct: 62 GSSEDEMRRRIAHFMNLV--NFEGEILYQDEAGSSLEAENMMK--GEIKYIRDGRIDSIS 117 Query: 126 AVIILESYF 134 A+IIL+ Y Sbjct: 118 AMIILQRYL 126 >UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Mycoplasma RepID=RUVX_MYCPN Length = 140 Score = 116 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 5/136 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKE--WQPDEIIVGL 61 +L DFG K IG A+ I P Q+ N + + LK+ ++ +I++G Sbjct: 4 ILGIDFGLKRIGTALVNTIDRFPSPFRVFAVQNNLQQAVNTLFKDLKQAGYELVQIVIGF 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P + + KF I RF V V L DE +T E ++ L E G K Sbjct: 64 P--HFHYQSSIQVSIHKFVELIKTRFNVPVTLIDESGTTSEVKANLQELGLKNRTFKKAK 121 Query: 122 DSASAVIILESYFEQG 137 D+ +A +ILE + Q Sbjct: 122 DTLAATLILERFLNQQ 137 >UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIY6_FIBSS Length = 134 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 3/133 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D+G +GVA G A I Q T + +++L++ + DE +VG+P + Sbjct: 1 MALDYGEHRVGVAFGDSELKMAFSRETID-QKTTNLFERLDQLVRLNKIDEFVVGMPYHP 59 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGL-FEQGGYRALNKGKVDS 123 DG + F + RF G+++ DE S+V+A+ + + NK +D Sbjct: 60 DGRKDGKNVVVEAFIKDLTLRFPGMKIHTQDESYSSVQAQEFTSYMSKKKKQKNKAIIDR 119 Query: 124 ASAVIILESYFEQ 136 +A IIL+ +F++ Sbjct: 120 TAAAIILQRWFDE 132 >UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SA15_PHYPA Length = 172 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 11/145 (7%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTA-RPLPAIKAQDGTPDWNIIERLLKEWQPDEIIV 59 + G + D G G+A+ + G A RPL + Q G I ++ + DE +V Sbjct: 11 VRGHTVGVDLGDAKTGLAIS--LGGYAPRPLTVV-RQRGDKLLETILQVGIPQRADEFVV 67 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGV-------EVKLHDERLSTVEARSGLFEQGG 112 GLP DG + + R FA R+ GV V L DE ++ +A + + G Sbjct: 68 GLPKAWDGKDSDQANKCRSFAGRLANIAGVVAYCRGWRVYLQDEYGTSQDALDYMIDMGS 127 Query: 113 YRALNKGKVDSASAVIILESYFEQG 137 R K ++D+ +A +L YFE G Sbjct: 128 NRRSRKEQLDAYAATALLCRYFESG 152 >UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tropheryma whipplei RepID=RUVX_TROW8 Length = 145 Score = 115 bits (288), Expect = 5e-25, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 7/131 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L DFG+ IGVA + A P+ + I + + DE+++GLPL Sbjct: 10 FLGLDFGSTRIGVA--RNCGSLAVPVGVLPRASC----AEILGYISRYSIDEVVIGLPLT 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 + G E+ A++F+ + GV+V+ DER +TV A + G + VD+A Sbjct: 64 LAGKEKQSARLAKEFSRFLVSS-GVQVRFFDERFTTVIATQKFYSLGKGVKQIRKCVDAA 122 Query: 125 SAVIILESYFE 135 +A ++L+ + + Sbjct: 123 AATVMLQLFLD 133 >UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZA0_BRAHW Length = 139 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A P I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGIDFGRKKTGTAFMDMDIKIPFPCRLIEESNARKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E A R+F+ + V++ DE ++ EA L G + + D Sbjct: 62 DEGKESDWCAEIRRFSEFLLKSVKVDIVFVDEYGTSKEADFILR--GKKKKVKNKANDLI 119 Query: 125 SAVIILESYFE 135 +A +ILE+Y Sbjct: 120 AATLILENYLN 130 >UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=cellular organisms RepID=RUVX_SYNS9 Length = 164 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++L+ D G K IG+A + T PLPA+ D ++ + ++VGLPL Sbjct: 13 SVLSLDVGRKRIGLAGCDPLGITVSPLPALHRGRFDNDLLVLRHHCQTRSVQGLVVGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G R++ R+ G+ + +E ST A E+ G + G++DS Sbjct: 73 DAAGQPTAQAEHCRRYGVRLAQSLGLPLAWVNEHSSTWAAG----ERHGLQGDRTGRLDS 128 Query: 124 ASAVIILESYFEQG 137 A+A ++LE + + G Sbjct: 129 AAAALLLEQWLQDG 142 >UniRef50_UPI00019786D3 Holliday junction resolvase-like protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019786D3 Length = 140 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 7/139 (5%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + +LA D G K IG+AV Q G P+ I ++ + +LK + + ++VGL Sbjct: 3 NKKILACDVGLKRIGLAVTQ--LGIILPIEPIIRKNRNQASKELSEILKTREIEILVVGL 60 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSG---LFEQGGYRALNK 118 P + R F + FG E+ DE +++EA + Q + Sbjct: 61 PSGGEAGHSDTRKRILHFVGLVA--FGGEIAYIDEDYTSLEALQSSAYMGVQNRLKIQKD 118 Query: 119 GKVDSASAVIILESYFEQG 137 G++DS SA +ILE + E Sbjct: 119 GRLDSLSATLILERFLESN 137 >UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Mycoplasma synoviae 53 RepID=RUVX_MYCS5 Length = 137 Score = 111 bits (279), Expect = 6e-24, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 53/131 (40%), Gaps = 1/131 (0%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L DFG IG A+ + L I+ L E++ D+ I+G PLN Sbjct: 4 LGIDFGLSRIGFAISDESNSFSLALENFDYDGSYEKIIQKIQLFLDEYKIDKFIIGYPLN 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G + +F + F ++KL +E S+ +A L + K K D Sbjct: 64 SRGEKTKTCLLIDEFIIHLEKNFDQKIKLINESYSSRKASEILHQANIKNKKQKDKKDML 123 Query: 125 SAVIILESYFE 135 +A IIL+ Y + Sbjct: 124 AAKIILQDYLD 134 >UniRef50_Q7V847 Putative Holliday junction resolvase n=3 Tax=Cyanobacteria RepID=RUVX_PROMM Length = 161 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 4/132 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L+ D G + IG+A + T PLP ++ + D +++ + + ++VGLPL+ Sbjct: 12 LSLDLGKRRIGLAGCDPLGITVSPLPPLQRKSFERDLKVLQWHCTSRKVEGLVVGLPLDA 71 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G ++ R+ + + L +E S+ A QG G++DSA+ Sbjct: 72 KGLPTDQARHYERYGQRLARALKLPLALVNEHSSSWAAAERYNLQG----DRSGQLDSAA 127 Query: 126 AVIILESYFEQG 137 A ++LE + +G Sbjct: 128 AALLLEQWLREG 139 >UniRef50_Q7VGU1 Putative Holliday junction resolvase n=2 Tax=Helicobacter RepID=RUVX_HELHP Length = 138 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 7/140 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ +LA D G K IG+A ++ PLP I + ++ +LKE ++VG Sbjct: 1 MNHCILACDVGLKRIGLATLKQEIIL--PLPPIIRINRNQAAKELDNVLKERNIHILVVG 58 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL---FEQGGYRALN 117 +P + R F + + F E+ +E ++ A L Q RA Sbjct: 59 MPSGGEAEHSDTQKRISHFISLLS--FEGEICFVNEDYTSFNALQSLSYMKRQNRARAQK 116 Query: 118 KGKVDSASAVIILESYFEQG 137 G++DS SA IL+ Y + Sbjct: 117 DGRIDSLSACEILQRYIQSQ 136 >UniRef50_C6HU38 Holliday junction resolvase YqgF n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HU38_9BACT Length = 168 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 59/142 (41%), Gaps = 10/142 (7%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLP--------AIKAQDGTPDWNIIERLLKEWQP 54 G L+ D+G + +GVA+ ARPL I Q+G + ++ + Sbjct: 9 GVLMGIDWGGRRVGVALSDPSRTLARPLTVLVRDGSGTIPFQEGEKLLASLRKIATDHDV 68 Query: 55 DEIIVGLP-LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY 113 ++ G+P ++ G P + A + + + LHDE S+ EA + + Sbjct: 69 TGLVFGIPYYHLSGDPNPHAPLFLRVARDLSRDLALPLFLHDEGQSS-EAAREIRKGHPG 127 Query: 114 RALNKGKVDSASAVIILESYFE 135 R + +D +A +L+ + + Sbjct: 128 RRNSAQSLDHVAAATLLQGFLD 149 >UniRef50_A7H4H6 Putative Holliday junction resolvase n=21 Tax=Epsilonproteobacteria RepID=RUVX_CAMJD Length = 129 Score = 109 bits (274), Expect = 3e-23, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 7/131 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 LA D G K IGVA+ A PL A+ ++ N I+ LLK + +IVG+P Sbjct: 2 RALALDIGLKRIGVALC-VDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPK 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +E+ +T R + F + + F E+ DE ++ +A GK+DS Sbjct: 61 G-GSSEEEMTRRIKHFVSLLE--FDKEICFVDESGTSKKALEYGIA---NTRKKDGKLDS 114 Query: 124 ASAVIILESYF 134 +A I+++ YF Sbjct: 115 LAAFIMIKDYF 125 >UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Actinomycetales RepID=RUVX_KINRD Length = 188 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGL 61 G LA D G+ +G+A A P+ + G D I + EI++GL Sbjct: 4 GVRLAVDVGSVRVGLAACDPAGVIASPVRTLVRDPGHDADVAEIAAEARARGAVEIVLGL 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PL++DG+E P RA +A++I V V+L DERLSTV A L G + Sbjct: 64 PLSLDGSEGPAALRALDYADKIVRSVPEVPVRLVDERLSTVGAHRALHAAGLKEKQFRAV 123 Query: 121 VDSASAVIILESYFE 135 VD A+AV++L++ + Sbjct: 124 VDQAAAVVLLQATLD 138 >UniRef50_A3EWG0 Putative holliday junction resolvase YqgF n=2 Tax=Leptospirillum sp. Group II RepID=A3EWG0_9BACT Length = 171 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 15/147 (10%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWN-------IIERLLKEWQPD 55 LL D+G +G+A+ + PL I+ + P + ++R+ E + Sbjct: 17 PLLGIDWGEARVGLAMSDNSLRFSEPLGVIENRCSFLPPFRIPSKSGGALKRICTEKKIQ 76 Query: 56 EIIVGLP-LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR 114 I+ G+P ++ G P + ++A I G V L DE L++ +S G + Sbjct: 77 GIVFGVPWYHLSGDPNPKSEVFVEYARLIRSLTGCPVFLWDEGLTSDVLKSE-RMSGKRK 135 Query: 115 -----ALNKGKVDSASAVIILESYFEQ 136 ++ +D SA +IL+S+ ++ Sbjct: 136 YSRSPKRSRDPIDHYSATLILQSFLDE 162 >UniRef50_D1IMS6 Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IMS6_VITVI Length = 224 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 6/139 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIV 59 G LL D G K +G+AV A PL + + D + L+ + IV Sbjct: 76 RGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNIDLMATDFQSLISDLSLAGFIV 135 Query: 60 GLPLNMDGTEQPLTARARKFANRI---HGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 G P N P + F + + GV DE ++ L + Sbjct: 136 GYPFNRQ-RSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDECFTSKNVELLLKPLNLHPVQ 194 Query: 117 NKGKVDSASAVIILESYFE 135 +K +D +AV IL+ Y + Sbjct: 195 SKTILDKFAAVGILQGYLD 213 >UniRef50_A9F903 Putative Hollyday junction resolvase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9F903_SORC5 Length = 163 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 41/115 (35%), Positives = 57/115 (49%) Query: 8 FDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDG 67 D G +GVAV + A P P + ++ + L ++ +VGLPL M+G Sbjct: 33 IDLGKARVGVAVTDELGLYAHPRPLLDGRNRKALLEALAALARDEGITRFLVGLPLEMNG 92 Query: 68 TEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 E P RA FA + GVEV+L DERL+TVEA L + G +K +VD Sbjct: 93 DEGPAARRALAFAQALADAAGVEVELVDERLTTVEAARRLRDGGVSGRKSKERVD 147 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Nei... 188 6e-47 UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostri... 186 2e-46 UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clo... 180 1e-44 UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betapro... 180 2e-44 UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Fi... 179 2e-44 UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Ga... 178 4e-44 UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=G... 177 7e-44 UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myx... 177 1e-43 UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Plancto... 176 2e-43 UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gam... 176 2e-43 UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=G... 175 4e-43 UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Aci... 175 5e-43 UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Bet... 174 7e-43 UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Pep... 174 7e-43 UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Ps... 174 9e-43 UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Nat... 173 1e-42 UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Bet... 173 1e-42 UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verruco... 173 2e-42 UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitroso... 173 2e-42 UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Be... 172 2e-42 UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickett... 172 3e-42 UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein ... 172 3e-42 UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syn... 172 4e-42 UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonucl... 172 4e-42 UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax... 171 6e-42 UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostri... 171 7e-42 UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=B... 171 8e-42 UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=... 171 8e-42 UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonucl... 170 9e-42 UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Ga... 170 1e-41 UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax... 169 2e-41 UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha p... 169 2e-41 UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiel... 169 3e-41 UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallion... 169 3e-41 UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Bu... 168 4e-41 UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=La... 167 8e-41 UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpeto... 167 8e-41 UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacteri... 167 9e-41 UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nit... 167 1e-40 UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicycl... 167 1e-40 UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermom... 167 1e-40 UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerof... 167 1e-40 UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredin... 167 1e-40 UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Cl... 166 2e-40 UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chl... 166 2e-40 UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphi... 165 6e-40 UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Glo... 164 6e-40 UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thi... 164 7e-40 UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteri... 163 1e-39 UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alp... 163 2e-39 UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidoba... 163 2e-39 UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellu... 163 2e-39 UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma p... 162 3e-39 UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Fi... 162 3e-39 UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Ta... 162 3e-39 UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Myc... 161 4e-39 UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Ana... 161 5e-39 UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betapro... 161 7e-39 UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bactero... 161 7e-39 UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rho... 161 8e-39 UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alc... 161 8e-39 UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomo... 160 1e-38 UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Cor... 160 1e-38 UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=unc... 160 1e-38 UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax... 160 2e-38 UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cy... 159 2e-38 UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=The... 159 2e-38 UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alp... 159 3e-38 UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidith... 159 3e-38 UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zym... 158 4e-38 UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Cox... 158 4e-38 UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonif... 158 6e-38 UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dic... 158 6e-38 UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Al... 158 6e-38 UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Ga... 158 6e-38 UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothr... 158 7e-38 UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma p... 158 7e-38 UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastop... 157 9e-38 UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Ent... 157 9e-38 UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Can... 157 9e-38 UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothi... 157 1e-37 UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermob... 157 1e-37 UniRef50_C5JAL6 Resolvase family protein, holliday junction-type... 156 2e-37 UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax... 156 2e-37 UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Ba... 156 3e-37 UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothi... 156 3e-37 UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Myc... 156 3e-37 UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Al... 155 3e-37 UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Fi... 155 3e-37 UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter ... 155 3e-37 UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alp... 155 4e-37 UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sph... 155 4e-37 UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Corioba... 155 4e-37 UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Ba... 155 5e-37 UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gam... 154 7e-37 UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachl... 154 7e-37 UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Sla... 154 8e-37 UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostri... 154 1e-36 UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Syn... 154 1e-36 UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Act... 153 1e-36 UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 153 1e-36 UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candida... 153 1e-36 UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9... 153 2e-36 UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thi... 153 2e-36 UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax... 153 2e-36 UniRef50_UPI000050F766 Holliday junction resolvase-like protein ... 153 2e-36 UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobactera... 152 2e-36 UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfo... 152 3e-36 UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethios... 151 4e-36 UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax... 151 4e-36 UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkerma... 151 6e-36 UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 151 6e-36 UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Can... 151 8e-36 UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Can... 150 9e-36 UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Therman... 150 1e-35 UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Ba... 150 1e-35 UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Ri... 150 2e-35 UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chl... 150 2e-35 UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Cla... 150 2e-35 UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Act... 149 2e-35 UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Ent... 148 4e-35 UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Myc... 148 5e-35 UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bor... 148 5e-35 UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Act... 148 5e-35 UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Ori... 148 5e-35 UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Ana... 148 6e-35 UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hyd... 147 9e-35 UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sph... 147 1e-34 UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydro... 147 1e-34 UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyp... 147 1e-34 UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Can... 146 2e-34 UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Des... 146 2e-34 UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavoba... 146 2e-34 UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Pro... 146 2e-34 UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostri... 146 2e-34 UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Aci... 145 3e-34 UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bif... 145 3e-34 UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodoth... 145 3e-34 UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Ac... 145 4e-34 UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttle... 145 4e-34 UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eub... 145 4e-34 UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteri... 145 6e-34 UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protei... 144 8e-34 UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Ace... 144 9e-34 UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dic... 144 9e-34 UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Maripro... 144 9e-34 UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Pol... 144 9e-34 UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mob... 144 1e-33 UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT 143 1e-33 UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Des... 143 1e-33 UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Ba... 143 1e-33 UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfo... 143 2e-33 UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Sub... 143 2e-33 UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomon... 142 3e-33 UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinom... 142 3e-33 UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xa... 141 4e-33 UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gem... 141 4e-33 UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Ac... 141 5e-33 UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalk... 141 5e-33 UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Al... 141 6e-33 UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Bu... 141 7e-33 UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Koc... 141 7e-33 UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Can... 141 8e-33 UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta pr... 141 9e-33 UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax... 140 1e-32 UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chl... 140 1e-32 UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wol... 140 1e-32 UniRef50_D1AX73 Holliday junction resolvase YqgF n=1 Tax=Strepto... 140 1e-32 UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Fr... 140 2e-32 UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrob... 140 2e-32 UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Plancto... 140 2e-32 UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax... 139 2e-32 UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha p... 139 2e-32 UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clo... 139 3e-32 UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Can... 138 4e-32 UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verruco... 138 4e-32 UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococ... 138 5e-32 UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax... 138 5e-32 UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens ... 138 7e-32 UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Des... 138 7e-32 UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Met... 138 8e-32 UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecali... 137 1e-31 UniRef50_B3ETT5 Putative Holliday junction resolvase n=1 Tax=Can... 137 1e-31 UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibac... 136 1e-31 UniRef50_D2NT33 Predicted endonuclease involved in recombination... 136 2e-31 UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Ac... 136 2e-31 UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Act... 136 3e-31 UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bi... 135 4e-31 UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Ach... 135 5e-31 UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psy... 135 5e-31 UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Myc... 135 5e-31 UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachys... 135 6e-31 UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Myc... 134 7e-31 UniRef50_B8ZUJ7 Putative Holliday junction resolvase n=16 Tax=Ac... 134 8e-31 UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betapro... 134 9e-31 UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibact... 133 1e-30 UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mol... 133 1e-30 UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacter... 133 2e-30 UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mob... 133 2e-30 UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia... 133 2e-30 UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Microco... 131 7e-30 UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea s... 131 8e-30 UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, s... 130 1e-29 UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Deh... 130 1e-29 UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Myc... 130 2e-29 UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR 130 2e-29 UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=... 129 2e-29 UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aqu... 129 3e-29 UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Myc... 128 4e-29 UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax... 128 5e-29 UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrich... 128 5e-29 UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opi... 127 1e-28 UniRef50_C6X127 Putative Holliday junction resolvase n=1 Tax=Fla... 126 2e-28 UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candida... 126 2e-28 UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylo... 126 2e-28 UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Myc... 125 3e-28 UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1... 124 8e-28 UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Pro... 124 8e-28 UniRef50_C8XD23 Holliday junction resolvase YqgF n=2 Tax=Actinom... 124 9e-28 UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=The... 124 1e-27 UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collins... 123 1e-27 UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira ... 123 2e-27 UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Ch... 123 2e-27 UniRef50_D0J8Y2 Holliday junction resolvase-like protein n=2 Tax... 123 2e-27 UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimi... 122 3e-27 UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitre... 122 3e-27 UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Sal... 122 4e-27 UniRef50_D1IMS6 Whole genome shotgun sequence of line PN40024, s... 121 9e-27 UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Myc... 121 9e-27 UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV1... 120 1e-26 UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylo... 120 2e-26 UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothe... 118 4e-26 UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ur... 118 4e-26 UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelo... 118 5e-26 UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Myc... 118 8e-26 UniRef50_C6HU38 Holliday junction resolvase YqgF n=1 Tax=Leptosp... 117 1e-25 UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coproth... 117 1e-25 UniRef50_Q5JN17 Os01g0764700 protein n=5 Tax=Poaceae RepID=Q5JN1... 116 2e-25 UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Cam... 116 3e-25 UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tro... 116 3e-25 UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax... 115 4e-25 UniRef50_UPI00019786D3 Holliday junction resolvase-like protein ... 115 5e-25 UniRef50_Q7VGU1 Putative Holliday junction resolvase n=2 Tax=Hel... 115 7e-25 UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylo... 114 1e-24 UniRef50_B3QXA0 Holliday junction resolvase YqgF n=1 Tax=Chloroh... 113 1e-24 UniRef50_Q7V847 Putative Holliday junction resolvase n=3 Tax=Cya... 113 1e-24 UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibroba... 112 3e-24 UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Act... 112 3e-24 UniRef50_A3EWG0 Putative holliday junction resolvase YqgF n=2 Ta... 112 3e-24 UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=ce... 111 7e-24 Sequences not found previously or not previously below threshold: >UniRef50_C1D4R9 Putative Holliday junction resolvase n=4 Tax=Neisseriaceae RepID=C1D4R9_LARHH Length = 155 Score = 188 bits (478), Expect = 6e-47, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 81/135 (60%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+ L FDFG IG+AVG R+ G A PL + A D + I L+ EWQ ++VGLP Sbjct: 5 GSWLGFDFGEARIGIAVGDRLVGIAHPLETLSAPDNDSRFARIAALIGEWQISGLVVGLP 64 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DGT +T AR+FA R+HGRFG+ V L DER S++ A L E G K +D Sbjct: 65 THADGTPHEMTRLARRFAQRLHGRFGLPVVLVDERHSSLLAEDLLRESGRRGRKQKPVLD 124 Query: 123 SASAVIILESYFEQG 137 +A +IL+S+F+QG Sbjct: 125 QVAAQVILQSFFDQG 139 >UniRef50_C5RHH5 Holliday junction resolvase YqgF n=4 Tax=Clostridiales RepID=C5RHH5_CLOCL Length = 135 Score = 186 bits (474), Expect = 2e-46, Method: Composition-based stats. Identities = 43/133 (32%), Positives = 66/133 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K+IGVAV + TA+ + I ++ D + E+ D I+VGLP Sbjct: 2 RVLGLDVGNKTIGVAVSDPLGFTAQGITTINRKNIKTDIETVVNYCNEYTVDTIVVGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P + + F ++ + +K+ DERL+TV A + E RA VD Sbjct: 62 NMNGTLGPQSEKVMAFVEKLKKNTDINIKMWDERLTTVAAHKAMLEADLSRAKRNKIVDK 121 Query: 124 ASAVIILESYFEQ 136 +A IL+ Y + Sbjct: 122 VAATYILQGYLDS 134 >UniRef50_Q0AZP9 Putative Holliday junction resolvase n=2 Tax=Clostridiales RepID=RUVX_SYNWW Length = 141 Score = 180 bits (459), Expect = 1e-44, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 70/134 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A + TA+ ++ + D + ++ L +E+Q ++I++GLPL Sbjct: 2 RIMGLDLGEKRIGIAFSDPMGWTAQGHSILQRKGLKKDLSYLQELCQEFQVEKIVLGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P ++FA + + V DERLS+ A L E R K +D Sbjct: 62 NMNGTMGPKALETQEFARALQEALKIPVDFWDERLSSKSAERVLLEADLSRKRRKELIDK 121 Query: 124 ASAVIILESYFEQG 137 +AV IL++Y + G Sbjct: 122 IAAVHILQAYLDGG 135 >UniRef50_C6WUE8 Holliday junction resolvase YqgF n=4 Tax=Betaproteobacteria RepID=C6WUE8_METML Length = 156 Score = 180 bits (457), Expect = 2e-44, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 86/135 (63%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SGT+LAFDFG + IG+AVG+ + +A PL I + + II +L+ EWQP ++VGL Sbjct: 17 SGTVLAFDFGERRIGIAVGEHLLASANPLMTIDNESNEIRFQIITKLVSEWQPRLLVVGL 76 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL++DG+E +T +KFA R++GRF + V L DER S+ EA L E G K + Sbjct: 77 PLSLDGSEHGVTQLCKKFARRLNGRFNLPVALIDERYSSAEASQLLNEAGIRGRAQKEML 136 Query: 122 DSASAVIILESYFEQ 136 D +A IL+SYF+Q Sbjct: 137 DQVAAQTILQSYFDQ 151 >UniRef50_A5D3C3 Putative Holliday junction resolvase n=93 Tax=Firmicutes RepID=RUVX_PELTS Length = 154 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 1/135 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD-WNIIERLLKEWQPDEIIVGLP 62 ++ D G K IGVA+ + TA+ L I + I L++++ +I+VGLP Sbjct: 2 RIMGLDLGDKKIGVALSDPMGWTAQGLDVIAVKGPPEASVERISELVRQYGVGKIVVGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NM+G+ P RAR FA + G + V+L DER++T+EA L E RA + +D Sbjct: 62 RNMNGSFGPRAERARAFAGCLAGALNLPVELWDERMTTLEAEKLLIEADLSRARRRQVID 121 Query: 123 SASAVIILESYFEQG 137 +AV+IL+S+ + Sbjct: 122 KMAAVLILQSFLDSQ 136 >UniRef50_Q5WYW4 Putative Holliday junction resolvase n=10 Tax=Gammaproteobacteria RepID=RUVX_LEGPL Length = 139 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 72/136 (52%), Positives = 95/136 (69%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L FDFG K IGVAVGQR+T +A PL I+A+ G PDWN I++++ +W P +IVGL Sbjct: 3 RGVYLGFDFGYKRIGVAVGQRLTCSASPLSTIEAKAGIPDWNTIQKVITQWNPQALIVGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P +D E T+ AR+FA ++H +F + V L DERLSTVEAR LFEQGGYR + K +V Sbjct: 63 PTCIDDRELYTTSAARRFAKQLHKQFSLPVHLVDERLSTVEARGYLFEQGGYRQIKKAEV 122 Query: 122 DSASAVIILESYFEQG 137 DS +A +ILE + +Q Sbjct: 123 DSIAACVILEQWLQQS 138 >UniRef50_Q0I1B3 Putative Holliday junction resolvase n=136 Tax=Gammaproteobacteria RepID=RUVX_HAES1 Length = 141 Score = 177 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 96/137 (70%), Positives = 115/137 (83%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 MS T+LAFDFGTKSIG AVGQ ITGTA+ LPA KAQDG PDW IE+ LK+WQP+ ++VG Sbjct: 1 MSITVLAFDFGTKSIGCAVGQSITGTAQALPAFKAQDGIPDWLKIEKCLKDWQPNIVVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPLNMDG+EQ LT ARKFANR++GRFGV+V+L DERL+T +AR +F++GGYRAL K K Sbjct: 61 LPLNMDGSEQDLTHLARKFANRLNGRFGVKVELQDERLTTKQARDEIFQRGGYRALKKEK 120 Query: 121 VDSASAVIILESYFEQG 137 VDS SA +ILES+FE G Sbjct: 121 VDSISACLILESWFENG 137 >UniRef50_Q1D063 Putative Holliday junction resolvase n=4 Tax=Myxococcales RepID=RUVX_MYXXD Length = 151 Score = 177 bits (449), Expect = 1e-43, Method: Composition-based stats. Identities = 47/132 (35%), Positives = 71/132 (53%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D GTK+IGVAV + TA+ + ++ D + + E + +++GLPL Sbjct: 2 RTMGLDLGTKTIGVAVSDGLGLTAQGITTVRRTSLKADLAALATVASEHEVTHVVLGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+E P +RKFA+ + GV V+L DERLSTV A L E RA + +D Sbjct: 62 NMDGSEGPRAEASRKFADTLAQSLGVTVELWDERLSTVAATRTLLEADVSRARRREVIDQ 121 Query: 124 ASAVIILESYFE 135 +A IL+ + + Sbjct: 122 VAAQFILQGWLD 133 >UniRef50_A6C393 Holliday junction resolvase YqgF n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C393_9PLAN Length = 162 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 64/134 (47%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+GTK +G+A+ A PL Q D + ++ E++ ++VGLP Sbjct: 19 GRLLGLDYGTKRVGIAISTFEQNIASPLDNYNRQSLPQDQKHLLSIITEYRCKGLVVGLP 78 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E AR+F N + + V+ DER S+ A L R K +D Sbjct: 79 VHMSGDEGQKAKEARQFGNWVSQFAEIPVRYWDERYSSATAEEILVNLNMSRNKRKAYLD 138 Query: 123 SASAVIILESYFEQ 136 +A IIL+S+ + Sbjct: 139 KLAAQIILQSFLDS 152 >UniRef50_Q88D32 Putative Holliday junction resolvase n=7 Tax=Gammaproteobacteria RepID=RUVX_PSEPK Length = 141 Score = 176 bits (447), Expect = 2e-43, Method: Composition-based stats. Identities = 68/134 (50%), Positives = 92/134 (68%), Gaps = 1/134 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL FD+G+K IGVAVGQ ITG AR L +KAQ+G PDW +E+L+ EW+PD I+VGLPLN Sbjct: 7 LLGFDYGSKQIGVAVGQVITGQARELCTLKAQNGVPDWAQVEKLIAEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEAR-SGLFEQGGYRALNKGKVDS 123 MDGT ++ARA KFA R++GRF + V HDERL+T EA+ + G + VD+ Sbjct: 67 MDGTPSEMSARAEKFARRLNGRFNLPVHTHDERLTTFEAKGERMARGGQRGSYRDNPVDA 126 Query: 124 ASAVIILESYFEQG 137 +A ++L+ + E Sbjct: 127 IAAALLLQGWLEAN 140 >UniRef50_Q3IFA0 Putative Holliday junction resolvase n=121 Tax=Gammaproteobacteria RepID=RUVX_PSEHT Length = 149 Score = 175 bits (445), Expect = 4e-43, Method: Composition-based stats. Identities = 81/135 (60%), Positives = 107/135 (79%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FDFGTKSIG+A+GQ +TG+A L A+KAQDG P+W+ I + EWQPD ++VGLPL Sbjct: 13 TVMGFDFGTKSIGIAIGQELTGSASSLKAVKAQDGIPNWDDIAVQVNEWQPDLMVVGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGT Q +T +A+KFANR+H + + V+ DERL+T +A++ LFEQGGY+ L KGKVD+ Sbjct: 73 NMDGTAQEVTFKAKKFANRLHNHYAIPVETQDERLTTADAKARLFEQGGYKNLGKGKVDN 132 Query: 124 ASAVIILESYFEQGY 138 SAVIILES+FE Y Sbjct: 133 MSAVIILESFFETSY 147 >UniRef50_Q1IU89 Putative Holliday junction resolvase n=2 Tax=Acidobacteria RepID=RUVX_ACIBL Length = 153 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 76/136 (55%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G +LA DFGT+ IG+AV + TA+ L + ++ D + ++++ + EI+VG Sbjct: 7 VHGRILALDFGTRRIGLAVSDPLGITAQGLQTLLRKNKRTDLAALRSVIEQNEIREIVVG 66 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL + G + T +AR+FA + F + V + DER ++VEA L E Sbjct: 67 LPLRLSGADSSSTEKAREFAAWLEKEFALPVHMWDERFTSVEANRVLRESEMSIKKRGEA 126 Query: 121 VDSASAVIILESYFEQ 136 VD SAV+IL+++ E+ Sbjct: 127 VDRLSAVLILQAFLER 142 >UniRef50_A1KB70 Putative Holliday junction resolvase n=5 Tax=Betaproteobacteria RepID=RUVX_AZOSB Length = 156 Score = 174 bits (443), Expect = 7e-43, Method: Composition-based stats. Identities = 60/135 (44%), Positives = 82/135 (60%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GTLLAFDFG IGVAVG+ T A PL + + + II RLL EW+P ++VGL Sbjct: 15 RGTLLAFDFGLARIGVAVGELETRHANPLLTVHEEANAARFAIIARLLDEWKPVALVVGL 74 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL-NKGK 120 P ++DG E L R R+FAN++HGRFG+ V L DERLS+ A L + G K Sbjct: 75 PGHLDGREHELAPRCRRFANQLHGRFGIPVHLVDERLSSAAAERQLHDAGLSGWQARKPV 134 Query: 121 VDSASAVIILESYFE 135 +D+ +A +IL+ + + Sbjct: 135 LDAVAAQLILQHFLD 149 >UniRef50_D1VUL9 Putative Holliday junction resolvase n=1 Tax=Peptoniphilus lacrimalis 315-B RepID=D1VUL9_9FIRM Length = 147 Score = 174 bits (443), Expect = 7e-43, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 69/134 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K IGVA+ A PL I+ ++ I L++++ +I+VGLP Sbjct: 3 RVLGLDVGEKWIGVAISDETFTIATPLETIERTSNKEAYDKIHDLIEKYDVKKIVVGLPK 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+ T P +KF+ ++ +F +E+ DER++T+ A+ L E R K VD Sbjct: 63 NMNNTLGPTCQMVQKFSEKLKNKFRLELVYVDERMTTLMAKDVLMEASVRRENRKKYVDK 122 Query: 124 ASAVIILESYFEQG 137 +A IL++Y + Sbjct: 123 IAAAFILKTYMDSS 136 >UniRef50_Q48P91 Putative Holliday junction resolvase n=15 Tax=Pseudomonas RepID=RUVX_PSE14 Length = 146 Score = 174 bits (442), Expect = 9e-43, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LL D+GTK IGVAVGQ ITG AR L +KAQ+G PDW+ ++ L+ EW+PD I+VGLPLN Sbjct: 7 LLGIDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWDKVQALINEWKPDAIVVGLPLN 66 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEAR-SGLFEQGGYRALNKGKVDS 123 MDGT ++ARA KF+ +++GRFGV V HDERL+T EA+ + G + VD+ Sbjct: 67 MDGTPSDMSARAEKFSRKLNGRFGVTVYTHDERLTTFEAKGERMARGGQKGSYRNNPVDA 126 Query: 124 ASAVIILESYFEQ 136 +A ++L+ + ++ Sbjct: 127 IAAALLLQGWLDE 139 >UniRef50_B2A5J5 Putative Holliday junction resolvase n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=RUVX_NATTJ Length = 141 Score = 173 bits (441), Expect = 1e-42, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 69/134 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ FD G +IGVAV + TA+ IK Q D + +L++++Q ++IVGLP Sbjct: 2 RIMGFDLGEATIGVAVSDALQLTAQGKTVIKRQSLEKDIEQVTKLIEDYQVSKLIVGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+G+ + + F + + ++ DERL++ A L E R K +D Sbjct: 62 NMNGSLGQMADQIMDFIKSLEQEVDIPIETVDERLTSRMAEQTLLEADVSRKKRKQVIDK 121 Query: 124 ASAVIILESYFEQG 137 +AV IL++Y ++ Sbjct: 122 LAAVNILQTYLDRQ 135 >UniRef50_Q0AIU5 Putative Holliday junction resolvase n=4 Tax=Betaproteobacteria RepID=RUVX_NITEC Length = 157 Score = 173 bits (440), Expect = 1e-42, Method: Composition-based stats. Identities = 53/138 (38%), Positives = 80/138 (57%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT+LAFDFG + IGVA+G+ A PL I P + I L++ WQP ++VG Sbjct: 17 LSGTVLAFDFGVRRIGVAIGEYELRLAHPLMTIDQAMTKPRFEKIAELIETWQPVLLVVG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 L ++ DG E +T ++FA R+ GRFG+ V + DER +T AR L E G + Sbjct: 77 LSVHADGAEHEITRLCQRFARRLEGRFGIPVVMEDERYTTAIARLTLEEVGITGRKQRPM 136 Query: 121 VDSASAVIILESYFEQGY 138 +D +A IL+++F+ + Sbjct: 137 LDQIAAQHILQTFFDSSH 154 >UniRef50_B4D9U2 Holliday junction resolvase YqgF n=2 Tax=Verrucomicrobia RepID=B4D9U2_9BACT Length = 140 Score = 173 bits (440), Expect = 2e-42, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 65/135 (48%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 L D G IGVAV + A PL I ++ I L+ II+GLP Sbjct: 2 KRALGIDHGDARIGVAVSDDLGMLAHPLETIHVKEVADPVARIATLVTSKDVGHIILGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NMDG+ P + R FA ++ G EVKL DERL++V A+ L E G ++ +D Sbjct: 62 RNMDGSYGPAAEKVRAFAEKLRAACGCEVKLWDERLTSVAAQRSLHEAGRKVKDSREVID 121 Query: 123 SASAVIILESYFEQG 137 +A +IL+ + + Sbjct: 122 QVAAQLILQGWLDSQ 136 >UniRef50_C6MFS9 Holliday junction resolvase YqgF n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MFS9_9PROT Length = 161 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 52/136 (38%), Positives = 80/136 (58%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G++LAFDFG K +GVA+G G A PL I ++ + +I +L+ WQP +VG+P Sbjct: 21 GSILAFDFGKKRVGVAIGNTALGVAHPLITIDSEVTNKRFVMIAQLIDTWQPVLFVVGMP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L+ DG LT +++FA R+ GRF + V + DER ++ A + L E G K +D Sbjct: 81 LHSDGIVHELTQLSQRFARRLAGRFNIPVVMQDERYTSQIASTILREAGVVGREQKSVLD 140 Query: 123 SASAVIILESYFEQGY 138 +A IL+S+F++ Y Sbjct: 141 QIAAQQILQSFFDEQY 156 >UniRef50_A1KUG2 Putative Holliday junction resolvase n=25 Tax=Betaproteobacteria RepID=RUVX_NEIMF Length = 151 Score = 172 bits (438), Expect = 2e-42, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 76/136 (55%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GT LAFDFG IGVA G G + PL + + I +L++EWQP +VGL Sbjct: 6 KGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDEKFAAIAKLVQEWQPRYFVVGL 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++ DGT+ +T +RKF R++GRF + V DERLS+V A S L E + K + Sbjct: 66 PVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERLSSVYAESLLSEAQVFGKKRKSVL 125 Query: 122 DSASAVIILESYFEQG 137 D +A IL +FE G Sbjct: 126 DQVAAQAILHGFFEGG 141 >UniRef50_A8PPF2 Putative uncharacterized protein n=1 Tax=Rickettsiella grylli RepID=A8PPF2_9COXI Length = 139 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 67/136 (49%), Positives = 87/136 (63%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + T++ FDFG K IGVA+GQ A+PL + + G W I +LLK W PD I+VG+ Sbjct: 4 TKTVIGFDFGLKYIGVAIGQTSPSLAQPLTNLSVKKGNLPWEEIAQLLKMWSPDVIVVGV 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P NMDGTEQP+T AR F + RF + V DERL+TVEARS LF GGY+AL K + Sbjct: 64 PFNMDGTEQPITREARNFLMELKNRFEIPVFPVDERLTTVEARSRLFALGGYKALKKKSI 123 Query: 122 DSASAVIILESYFEQG 137 DS +A +I+E + E Sbjct: 124 DSIAAQLIVEIWLENQ 139 >UniRef50_UPI0000E87B46 Holliday junction resolvase-like protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87B46 Length = 148 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 61/133 (45%), Positives = 80/133 (60%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFG K IGVA+G IT TA PL I+ + IIE LL EW+P ++VGLPLN Sbjct: 16 VIAFDFGEKKIGVAIGNSITKTAHPLETIRKVKKSERIEIIENLLNEWEPGIVVVGLPLN 75 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DGTE LT A+ FA +I RF V + + DER ++VEA+ L E +D Sbjct: 76 EDGTESRLTLLAQNFAKKIKNRFQVPIVMVDERYTSVEAKILLNENVKSIKKGNQVIDQV 135 Query: 125 SAVIILESYFEQG 137 +A IIL SYF++ Sbjct: 136 AAQIILGSYFDRS 148 >UniRef50_Q2LR42 Putative Holliday junction resolvase n=1 Tax=Syntrophus aciditrophicus SB RepID=RUVX_SYNAS Length = 150 Score = 172 bits (437), Expect = 4e-42, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 69/132 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D+G K IGVA+ + TA+ L + + D II L++ + ++I++G PL Sbjct: 2 RILGLDYGEKRIGVALCDELGLTAQALTTVIRKSWRNDVGIIASLVRTYDVEKIVIGYPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +DGTE + +FA R+ G+ V DE L+T EA L G +G VD Sbjct: 62 RLDGTEGIQCEKVVRFARRLEAALGIPVIRWDETLTTKEAEEILSRSGVPPRKRRGVVDR 121 Query: 124 ASAVIILESYFE 135 +A +IL+SY + Sbjct: 122 LAASLILQSYLD 133 >UniRef50_C4V2N7 YqgF family crossover junction endodeoxyribonuclease n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V2N7_9FIRM Length = 143 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 1/136 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++ D G +IG+AV + TA+ + ++ + D + +L++E++ D ++ GLP Sbjct: 2 KRYMSLDLGDATIGIAVSDLLGLTAQGVETVRRTNIEADLAHLGQLMQEYEVDALVAGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 +M+G E + R F + F G EV DERLSTV A L R + + Sbjct: 62 KHMNGDEGERCSIVRAFMAEVEEHFPGTEVHYWDERLSTVAASRALIAGDVSRKKRRKVI 121 Query: 122 DSASAVIILESYFEQG 137 D +AV IL+ + ++ Sbjct: 122 DKMAAVYILQGFLDRQ 137 >UniRef50_C4K449 Holliday junction resolvase-like protein n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K449_HAMD5 Length = 145 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 87/133 (65%), Positives = 108/133 (81%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGTKSIGVA+GQ IT TARPL A K+++GTPDW IERLL EW PD ++VG PLN Sbjct: 6 IIAFDFGTKSIGVAIGQNITETARPLTACKSKNGTPDWIKIERLLSEWYPDLVVVGFPLN 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTEQP+T AR+F + ++ RFG++V HDERLST EAR+ LF++GGY+ALNK VD+ Sbjct: 66 MDGTEQPITESARQFGHALYRRFGIKVVFHDERLSTAEARAYLFDKGGYQALNKSSVDAT 125 Query: 125 SAVIILESYFEQG 137 SAVIILES+F Sbjct: 126 SAVIILESWFSSN 138 >UniRef50_A7VP83 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VP83_9CLOT Length = 139 Score = 171 bits (434), Expect = 7e-42, Method: Composition-based stats. Identities = 46/131 (35%), Positives = 65/131 (49%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G GVAV R A PL I+ + I +L E + ++I +GLP N Sbjct: 3 ILGIDLGKARTGVAVCDRAEMLASPLCVIQEHNRERLIEKIVKLSNERRAEQIALGLPKN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+E AR+F + + G+ V DER +TV A L + K VDS Sbjct: 63 MDGSEGESAQNAREFGALLQEKTGLPVAFVDERGTTVTAHGYLNQTDVRGKKRKAVVDSV 122 Query: 125 SAVIILESYFE 135 +AVIIL++Y + Sbjct: 123 AAVIILQNYLD 133 >UniRef50_A9KKS6 Putative Holliday junction resolvase n=146 Tax=Bacteria RepID=RUVX_CLOPH Length = 150 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 3/135 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD---WNIIERLLKEWQPDEIIVG 60 ++ D+G+ ++GVA+ + TA+ + I+ + T IE L+KE++ +EI++G Sbjct: 2 RIMGLDYGSVTVGVAISDSLKLTAQGIEVIRRKSETKLRQTLARIEELIKEYEVEEIVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P NM+ T ++ +FA + R G+ V L DERL+TV A L Sbjct: 62 YPKNMNNTIGERAEKSEEFAEHLRRRTGLPVVLWDERLTTVAAHQVLNAGEVSLKKKMEV 121 Query: 121 VDSASAVIILESYFE 135 VD +AV IL+ Y + Sbjct: 122 VDKLAAVFILQGYLD 136 >UniRef50_UPI00016C4E3C hypothetical protein GobsU_21610 n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4E3C Length = 169 Score = 171 bits (434), Expect = 8e-42, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 2/136 (1%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G LL D+GTK IGVAV A P+ + L + ++VGL Sbjct: 14 RGALLGVDYGTKRIGVAVCDPDRVIASPVGT--QANDATREPYFRDLCARSKFAGVVVGL 71 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+ G E P++ AR FA + G+ V + DER ++ A S L G R K KV Sbjct: 72 PLHASGEESPMSGEARAFARWLSDLTGLPVVMWDERHTSFAAESALLGAGLTRKKRKEKV 131 Query: 122 DSASAVIILESYFEQG 137 D +A +IL+++ + G Sbjct: 132 DRVAAQMILQTFIDAG 147 >UniRef50_C2L1K0 YqgF family crossover junction endodeoxyribonuclease, YrrK n=1 Tax=Oribacterium sinus F0268 RepID=C2L1K0_9FIRM Length = 141 Score = 170 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ---DGTPDWNIIERLLKEWQPDEIIVG 60 +LA D+G+K++G+A+ + +PL I + I+ KE+Q +E+++G Sbjct: 2 RILALDYGSKTVGLAITDPLGIIVQPLKTIWREREGKLRKTVEEIQETCKEYQVEELVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P +MDG+E R F + + + + L+DERLST+EA L E G + K Sbjct: 62 YPCHMDGSEGERVERVLAFQEMLKKKIELPIHLYDERLSTMEAEEILRENGVPKDRQKEV 121 Query: 121 VDSASAVIILESYFEQ 136 +D +A +ILE Y Sbjct: 122 LDQVAAQVILEDYLRN 137 >UniRef50_Q1R1I5 Putative Holliday junction resolvase n=28 Tax=Gammaproteobacteria RepID=RUVX_CHRSD Length = 148 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 69/130 (53%), Positives = 88/130 (67%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFDFGT+ IGVAVG + G+A L + A+DG PDW I LL+EWQPD ++VGLPLN Sbjct: 9 VLAFDFGTRRIGVAVGNEMLGSATALAPLPARDGIPDWQQIAALLEEWQPDLLVVGLPLN 68 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE ++ RARKF NR+HGRFG V++ DER ST A+ + G VD Sbjct: 69 MDGTESDMSRRARKFGNRLHGRFGKPVEVFDERGSTRAAKRIARDAGHRGNYRDDGVDGI 128 Query: 125 SAVIILESYF 134 +A +ILES+F Sbjct: 129 AAQLILESFF 138 >UniRef50_A3J8B2 Holliday junction resolvase-like protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3J8B2_9ALTE Length = 140 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 68/133 (51%), Positives = 94/133 (70%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++AFDFGT+ IGVAVGQ + G PL I A+DGTPDW +E+LL EW+PD ++VGLPL Sbjct: 8 RVMAFDFGTRRIGVAVGQEMLGRGEPLTMIAARDGTPDWTQLEKLLHEWRPDLVVVGLPL 67 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMD +E + RARKF R+HGRF V V++ DERL++ +A+ + GG R + +D Sbjct: 68 NMDDSENEMCVRARKFGKRLHGRFHVTVEMVDERLTSYQAKGEVMAAGGSRNYRRDGIDD 127 Query: 124 ASAVIILESYFEQ 136 +AV+ILE++F Q Sbjct: 128 RAAVLILETWFNQ 140 >UniRef50_D0RNR4 Putative uncharacterized protein n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RNR4_9RICK Length = 156 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 64/134 (47%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + +L D G K+IG++V A P I + + +++E++ I++G Sbjct: 19 NSRILGIDPGKKNIGLSVSDPNQKIATPFKIIVMKKFKQFLEELNNIIREYEIKGIVIGN 78 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P+NMDGT P + AR FA I + + L DERLS+ A + + + + + Sbjct: 79 PINMDGTSGPRSQSARDFAQNISKNTKLPITLWDERLSSEGAFNLMGDLDINSSKKSKNL 138 Query: 122 DSASAVIILESYFE 135 D +A IL+ Y + Sbjct: 139 DQHAAAFILQGYLD 152 >UniRef50_C7R793 Holliday junction resolvase YqgF n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R793_KANKD Length = 145 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 66/135 (48%), Positives = 93/135 (68%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L FDFG K +GVA G R +++ L + + PDW +IE L++EW + +VGL Sbjct: 7 AQRYLCFDFGEKRLGVATGVRTQMSSQALTVLAVTNDQPDWKLIENLIREWNVEAFVVGL 66 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMD +EQ LT +ARKFANR+HGRFG+ LHDERLS+ E + L+E GGY+ L + + Sbjct: 67 PLNMDDSEQELTQKARKFANRLHGRFGLPTHLHDERLSSAEVKDYLYEIGGYKKLKQNPI 126 Query: 122 DSASAVIILESYFEQ 136 D+ +A +IL+S+FEQ Sbjct: 127 DAYAAELILKSFFEQ 141 >UniRef50_C5V0I3 Holliday junction resolvase YqgF n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0I3_9PROT Length = 167 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 58/136 (42%), Positives = 84/136 (61%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + GTLLAFDFGT+ IGVAVG + +A PL I + ++ I +L+ EWQP ++VG Sbjct: 12 VVGTLLAFDFGTQRIGVAVGNTFSSSAEPLTTIAEEKNELRFSAITKLVAEWQPCALVVG 71 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP + DG+ LTA ++FA R+HGR+G+ L DER S++ A L QG K Sbjct: 72 LPCSDDGSPHELTALCQRFAKRLHGRYGLTTLLVDERYSSLAASEQLNRQGVRGRDQKAL 131 Query: 121 VDSASAVIILESYFEQ 136 +D +A IL++YF++ Sbjct: 132 IDQYAAQQILQAYFDE 147 >UniRef50_B2JFD3 Putative Holliday junction resolvase n=61 Tax=Burkholderiaceae RepID=RUVX_BURP8 Length = 151 Score = 168 bits (428), Expect = 4e-41, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFD+G K IGVAVG +T +ARPL ++ ++ + + +L+ EW+PD ++VGLP+ Sbjct: 10 TLLAFDYGEKRIGVAVGNSLTRSARPLVVLQNRNREYRFEAVGKLIDEWKPDALVVGLPM 69 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DGT T A++F N+++GRF + V DER S+VEA +G+ G +D+ Sbjct: 70 HPDGTPHERTQLAKRFGNQLNGRFNLPVTWIDERYSSVEAEAGIR----SGTRQAGMLDA 125 Query: 124 ASAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 EAACIILQQYLD 137 >UniRef50_Q1WT34 Putative Holliday junction resolvase n=19 Tax=Lactobacillaceae RepID=RUVX_LACS1 Length = 147 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 3/136 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVG 60 G L+ D G++++GVAV + TA+ + ++ + ++ + I L+KE + ++G Sbjct: 2 GRLMGLDVGSRTVGVAVSDMLGWTAQGVEIVQINEDEQEFGLDRIAELVKENEVVGFVLG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFE-QGGYRALNKG 119 LP NM+ T P A+ + + +F + + DERL+TVEA L E R K Sbjct: 62 LPKNMNNTSGPRVEAAKAYGELLEEKFNLPIDFIDERLTTVEAERMLVEQADASRKKRKK 121 Query: 120 KVDSASAVIILESYFE 135 +D +A +IL++Y + Sbjct: 122 VIDKLAASLILQNYLD 137 >UniRef50_A9B658 Holliday junction resolvase YqgF n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B658_HERA2 Length = 158 Score = 167 bits (425), Expect = 8e-41, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 66/134 (49%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G K IGVA+ A P + AQ + + ++ E + E+++GLP Sbjct: 8 GRIIALDVGNKRIGVAMCDPDRIIASGQPTLPAQPTDKAYAQLLHMITEHEVVEVVIGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L + G + F+ + R + + L+DER ++VEA L G ++ ++ VD Sbjct: 68 LTLRGEVGAQAKAVQAFSRGLEKRTKIPITLYDERFTSVEAERSLEAMGIKKSKHRDHVD 127 Query: 123 SASAVIILESYFEQ 136 +A++IL+ Y Sbjct: 128 ELAAILILQDYMSS 141 >UniRef50_B9XDA0 Holliday junction resolvase YqgF n=1 Tax=bacterium Ellin514 RepID=B9XDA0_9BACT Length = 138 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 73/133 (54%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D GTK IG+A+ + A+PL + A+ +++L++E Q + ++VG+P Sbjct: 3 RILAIDHGTKRIGLAISDELGVIAQPLEFVLAEPFANFLVRLKQLIQEKQVEMLLVGMPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ P + ++F + + +K DERL++ +A L + R K KVD Sbjct: 63 NMDGSYGPAALKVQEFVTVLKDSVAIPIKTWDERLTSAQANRFLIQADVRRDKRKEKVDK 122 Query: 124 ASAVIILESYFEQ 136 +A I+L+SY + Sbjct: 123 TAAAILLQSYLDS 135 >UniRef50_Q3JE53 Putative Holliday junction resolvase n=2 Tax=Nitrosococcus oceani RepID=RUVX_NITOC Length = 152 Score = 167 bits (424), Expect = 1e-40, Method: Composition-based stats. Identities = 65/133 (48%), Positives = 91/133 (68%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L FDFG + IGVAVGQ +T +A PL +KA +G PDWN I +L+++W PD +IVGLPLN Sbjct: 16 VLGFDFGLRYIGVAVGQEVTHSANPLTTLKAHEGNPDWNQITQLIRQWNPDLLIVGLPLN 75 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +EQ LT AR+F +R+HGR+G+ V+ DERLSTVEAR L + + +D Sbjct: 76 MDQSEQFLTKAARRFGHRLHGRYGLAVEWVDERLSTVEARERL-NIKSSASGRRQGIDQM 134 Query: 125 SAVIILESYFEQG 137 +A IL+++ + Sbjct: 135 AAQCILQTWLTEQ 147 >UniRef50_C8WQ91 Holliday junction resolvase YqgF n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WQ91_ALIAD Length = 144 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 71/131 (54%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A DFG + IGVA+ + A+P I+ Q + + L + + I+VG PL+M Sbjct: 1 MAIDFGERRIGVALSDPMGLIAQPYGVIERQSDRQAADEVADLARREEVGRIVVGRPLHM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G +T+RA KFA + R G+ V L+DERL+TV A L EQ R + VD+A+ Sbjct: 61 SGQPSEMTSRAEKFARMLAARTGLPVDLYDERLTTVSAERILIEQNVRRRERRATVDAAA 120 Query: 126 AVIILESYFEQ 136 A ++LE Y Sbjct: 121 AQVLLEDYLRS 131 >UniRef50_D1C428 Holliday junction resolvase YqgF n=2 Tax=Thermomicrobia (class) RepID=D1C428_SPHTD Length = 143 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+A D G + +GVAV + A P+ ++ + D + L++ + P+ II+GLPL Sbjct: 10 RLIALDVGARRVGVAVSDELGLIASPVESVDMKRDGMD--RLVALIERYDPERIIIGLPL 67 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 M G E P A R FA ++ GR + DERL+T A L E G RA K VD+ Sbjct: 68 GMSGREGPQAAATRAFAQQLRGRVDRPIIFWDERLTTFMADQSLIEAGHRRARRKQHVDA 127 Query: 124 ASAVIILESYFEQG 137 +A +IL+SY + Sbjct: 128 VAAALILQSYLDSQ 141 >UniRef50_B1C812 Putative uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C812_9FIRM Length = 144 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 1/136 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIV 59 M +LA D+G IGVAV + TA+ + IK ++ D I++ +KE+ +I+ Sbjct: 1 MKKRILALDYGDSRIGVAVSDALHITAQGICVIKRTKNIEEDIEKIKKYIKEYDTGLVIL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G PLN+ G +F + + + + V+L DERLST EA L G + Sbjct: 61 GHPLNLSGERGTRALVTEEFCDILKEKIDIPVELWDERLSTKEAERALEAGGVNWRKKRE 120 Query: 120 KVDSASAVIILESYFE 135 +D +A IIL SY + Sbjct: 121 VIDMMAAQIILSSYLD 136 >UniRef50_C5BLK5 Putative uncharacterized protein n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BLK5_TERTT Length = 146 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 66/133 (49%), Positives = 90/133 (67%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+LAFDFGT+SIGVAVGQ +T +A LP +KA+DG PDW +E+L +W+P+ ++VGLP+ Sbjct: 9 TILAFDFGTRSIGVAVGQTLTQSASELPTLKAKDGIPDWQQLEQLFSDWRPNLVVVGLPV 68 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+E +T RARKF NR++GRF V DERL+T A+ G VDS Sbjct: 69 NMDGSEMEMTRRARKFGNRLNGRFNQTVAFFDERLTTRAAKEEAAAHGHRGNYRAKPVDS 128 Query: 124 ASAVIILESYFEQ 136 +A +ILE + + Sbjct: 129 IAARLILEGWMSE 141 >UniRef50_B8I4S7 Putative Holliday junction resolvase n=19 Tax=Clostridium RepID=RUVX_CLOCE Length = 142 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 73/134 (54%), Gaps = 1/134 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGLP 62 +L D+G IGVA+ + TA+ L IK++D + ++ E+ +I++G P Sbjct: 2 RILGIDYGDSRIGVAISDPMGWTAQGLEMIKSKDSLKKAVLRLSEIINEYSVTDIVIGYP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +NM+GT+ P T R +F +I + DERL+TV A + E G + KG VD Sbjct: 62 INMNGTKGPRTERTEEFIKKISDLGQFNIIKWDERLTTVSAHRTMNELGIKASKKKGIVD 121 Query: 123 SASAVIILESYFEQ 136 + SAV+IL+ Y ++ Sbjct: 122 TMSAVLILQGYLDR 135 >UniRef50_A9WCR4 Putative Holliday junction resolvase n=5 Tax=Chloroflexaceae RepID=RUVX_CHLAA Length = 153 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 64/131 (48%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G + IGVA+ A PL I A I RL++E ++VGLPL Sbjct: 6 ILALDVGERRIGVAISDADARIAAPLTTINAHPPERAIAQIVRLVQERGVSRVVVGLPLT 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M G P ++FA+ + V++ DERL++V A L G A K ++D Sbjct: 66 MRGERGPQAEVVQRFADTLSSALSCPVEMFDERLTSVAAEQMLRNLGLKPAKIKAQIDQV 125 Query: 125 SAVIILESYFE 135 +A IIL+ Y + Sbjct: 126 AASIILQDYLD 136 >UniRef50_B3E0A2 RNase H-like ribonuclease n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0A2_METI4 Length = 168 Score = 165 bits (418), Expect = 6e-40, Method: Composition-based stats. Identities = 43/131 (32%), Positives = 70/131 (53%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L+ D+G K IG+AV A PL + A+ ++ ++ ++ +IVGLP N Sbjct: 25 ILSLDYGNKHIGLAVNDESFSIAIPLDPLPAEPYVKFIGKLKEIIVNYEVSLLIVGLPRN 84 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P + R+F ++ + V+ HDERL+T A L + G K K+DS Sbjct: 85 MDGSYGPAAEKVRQFVLKLKQWIPIPVEFHDERLTTKLADRLLTQCGCNGREKKKKIDSY 144 Query: 125 SAVIILESYFE 135 +A +IL+SY + Sbjct: 145 AAAVILQSYLD 155 >UniRef50_Q7NLJ1 Putative Holliday junction resolvase n=1 Tax=Gloeobacter violaceus RepID=RUVX_GLOVI Length = 156 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G+K IGVA A L I + D + I ++ + +++GLP N Sbjct: 6 VLGLDVGSKRIGVAGCDPTGLIASGLETIVRCNLGADLDAIRHWIERRRAQAVVIGLPRN 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 M+G+ P R + F ++ V + DERLSTV+A L Q K +D Sbjct: 66 MNGSLGPQAHRIQHFGQQLARVIDVPIDYVDERLSTVQAGRAL--QSVSATRRKALIDQQ 123 Query: 125 SAVIILESYFE 135 +A IIL+ + + Sbjct: 124 AAAIILQQWLD 134 >UniRef50_Q3SFS3 Putative Holliday junction resolvase n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=RUVX_THIDA Length = 145 Score = 164 bits (417), Expect = 7e-40, Method: Composition-based stats. Identities = 56/133 (42%), Positives = 76/133 (57%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+LAFD G K GVA G+ G A PL I+A+ IE+L EWQP ++GLP Sbjct: 8 GTVLAFDLGLKRTGVASGELAIGIAHPLTVIQAESTDARMAAIEKLAAEWQPALFVLGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DG+E +T AR FA R+ RF V L DERL++ A S L +G + NK D Sbjct: 68 TRADGSENEMTRVARNFARRLESRFERPVFLIDERLTSATAESELHARGIHGKKNKALTD 127 Query: 123 SASAVIILESYFE 135 + +A +IL+ +F+ Sbjct: 128 AVAAQLILQGFFD 140 >UniRef50_A3K135 Putative uncharacterized protein n=3 Tax=Bacteria RepID=A3K135_9RHOB Length = 156 Score = 163 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 63/132 (47%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L+ D GTK+IGVAV + A PL +K + D ++ L+ + +I+GLP N Sbjct: 19 LMGLDLGTKTIGVAVSDGLRSVATPLETVKRKKFGVDAERLQALIAGRRIGGLILGLPRN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDGTE P R FA + + DERLSTV A L E R +D Sbjct: 79 MDGTEGPRCQSTRAFARNFAALWDGPIGYWDERLSTVAAEKALLEADTTRKRRAEVIDHV 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASYILQGALDR 150 >UniRef50_B6IN25 Putative Holliday junction resolvase n=3 Tax=Alphaproteobacteria RepID=RUVX_RHOCS Length = 188 Score = 163 bits (414), Expect = 2e-39, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L+ D G K+IG+AV A P+ I+ T D + R +++ ++VGL Sbjct: 16 NGRLMGLDLGEKTIGLAVSDPGLSVASPVGTIRRTKFTQDAQELARAMRDRDVRALVVGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGV-----EVKLHDERLSTVEARSGLFEQGGYRAL 116 P+NMDGTE P R+F+ + R + E+ DERLST + R Sbjct: 76 PVNMDGTEGPRCQSVREFSRLLLQRPQLFGFEPEIAFWDERLSTSAVERMMIGWDMTRKR 135 Query: 117 NKGKVDSASAVIILESYFEQ 136 VD +A IL+ ++ Sbjct: 136 RDEVVDKMAAAYILQGALDR 155 >UniRef50_C1F9N1 Putative uncharacterized protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9N1_ACIC5 Length = 146 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 69/129 (53%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D G + +GVAV + TA+P+ + + D + RLL+ + E++VG PL M Sbjct: 1 MALDVGDRRVGVAVSDELGLTAQPVLTLVRTNRKQDMKSLGRLLRRFGCTEVVVGNPLYM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G P +A+ FA + FG+ V L DERL+T EA L G + ++ VD + Sbjct: 61 SGDISPQALKAQAFAAWVREEFGLPVHLWDERLTTTEAHRHLHAAGRPGSEHREVVDQVA 120 Query: 126 AVIILESYF 134 AV+IL+ + Sbjct: 121 AVLILDGFL 129 >UniRef50_D2R1W7 Holliday junction resolvase YqgF n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1W7_9PLAN Length = 153 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 66/136 (48%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G L+ D+GT IG+A+ A PL + G D +R+ +E + +VG Sbjct: 6 VRGRLIGVDYGTVRIGLAITDPEQKFASPLDNYTRRGGQADARYFQRVAQEERAAAWVVG 65 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP++ G+E + AR+FA ++ + V L DER ++ +A L G R K Sbjct: 66 LPVHTTGSESQKSTEARQFAKQLEELTKLPVFLFDERFTSADAEEMLIAAGMSRKERKSH 125 Query: 121 VDSASAVIILESYFEQ 136 +D +A I+L ++ Sbjct: 126 LDKLAAQILLSAFLRS 141 >UniRef50_B5JTQ9 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTQ9_9GAMM Length = 141 Score = 162 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLL DFG K IG+A GQ +T +A PL + +W+ ++++LK+W+PD I++GLPL Sbjct: 3 TLLGIDFGLKRIGIATGQTLTCSATPLTTLPNHAEHTNWDGLDKVLKDWKPDAIVLGLPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQ----GGYRALNKG 119 N DG++ LT + R+F + + F + DER S+ EA L Q R + K Sbjct: 63 NKDGSDHALTKQVRQFRDTLGQHFSGPIHWQDERASSREAEQSLTSQRASGDLRRKVKKE 122 Query: 120 KVDSASAVIILESYFEQ 136 +D +A +IL+ + + Sbjct: 123 DIDQLAAALILQRWLNK 139 >UniRef50_Q04ER1 Putative Holliday junction resolvase n=95 Tax=Firmicutes RepID=RUVX_OENOB Length = 144 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGL 61 LL D G+K++GVA + TA + I+ + ++ + + +++ E + I++GL Sbjct: 2 RLLGLDVGSKTVGVAQSDPLGWTASSIEIIRINEAQGEFGLDRLGQIISEKKVSGIVIGL 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGK 120 P NM+ TE P +R + + RFG+ + DERL++VEA L E RA K Sbjct: 62 PKNMNNTEGPRVEASRNYGKMVSERFGLPIDYQDERLTSVEANRMLIEEADLSRAKRKKV 121 Query: 121 VDSASAVIILESYFEQ 136 +DS +A +IL++Y ++ Sbjct: 122 IDSLAAQLILQNYLDK 137 >UniRef50_C2DZL7 Crossover junction endodeoxyribonuclease n=13 Tax=Firmicutes RepID=C2DZL7_9LACO Length = 148 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 76/136 (55%), Gaps = 4/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGL 61 LL D G+K++GVA+ + TA+ L I + ++ I+++++E+ ++GL Sbjct: 2 RLLGLDVGSKTVGVAISDELGLTAQKLETISIDETRHNFGMKAIKKIVREYDVTGFVLGL 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQG--GYRALNKG 119 P NMDG++ R++ + R+ +F + V DERL+T+EA L E+ R K Sbjct: 62 PKNMDGSDGASVNRSKNYGKRLEEKFSLPVAYSDERLTTIEADRVLIEEAEIHDRKKRKE 121 Query: 120 KVDSASAVIILESYFE 135 +D +AV+IL++Y + Sbjct: 122 VIDQMAAVLILQNYLD 137 >UniRef50_C5J6A4 Putative Holliday junction resolvase n=1 Tax=Mycoplasma conjunctivae HRC/581 RepID=C5J6A4_MYCCR Length = 141 Score = 161 bits (410), Expect = 4e-39, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 2/139 (1%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG--TPDWNIIERLLKEWQPDEII 58 + +LA D GTK+ G A+ + A+ L ++G I L K+++ +I+ Sbjct: 3 VKKRILALDLGTKTCGFAITDPLAIIAQSLENFTYKNGDLNQIVLKIRDLQKQYEIGKIV 62 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 +G PL M+G + P T K ++ + F + V L DERLST +A L R K Sbjct: 63 LGYPLYMNGNKAPHTLLVEKMSSILKQNFQIPVVLQDERLSTSQAHDILILANVSRKKRK 122 Query: 119 GKVDSASAVIILESYFEQG 137 +D +A IILE Y + Sbjct: 123 KVIDKLAAQIILERYLSEN 141 >UniRef50_Q2IQC1 Putative Holliday junction resolvase n=4 Tax=Anaeromyxobacter RepID=RUVX_ANADE Length = 137 Score = 161 bits (410), Expect = 5e-39, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 73/133 (54%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G IG+AV I TAR + + + D I + ++++ +VGLPL Sbjct: 2 RTLGVDLGRVRIGLAVADEILRTARAVTTVVRRGEAEDLAAIAEVARDYEVTRAVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE P AR FA R+ GV V+L DERLS+ EA S L +G +G+VD+ Sbjct: 62 NMDGTEGPSARLARGFAPRLEAALGVPVELFDERLSSFEAESRLRARGVSARDQRGQVDA 121 Query: 124 ASAVIILESYFEQ 136 +A +IL+ + ++ Sbjct: 122 EAAAVILQGWLDR 134 >UniRef50_C6X9Q7 Holliday junction resolvase YqgF n=3 Tax=Betaproteobacteria RepID=C6X9Q7_METSD Length = 172 Score = 161 bits (409), Expect = 7e-39, Method: Composition-based stats. Identities = 64/133 (48%), Positives = 84/133 (63%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT LAFDFG K IGVAVG+ + G A PL I+++ + I L+ EW+P +IVGLP Sbjct: 25 GTALAFDFGEKRIGVAVGEHLLGIAHPLTTIESEANDVRFAAISALINEWRPTVLIVGLP 84 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L++DG E + RKFA R+ GRFG+ V + DERLS+ EA S L E G Y K +D Sbjct: 85 LSLDGEEHATSLLCRKFARRLDGRFGLPVVMIDERLSSAEASSSLNETGVYGRKQKVMLD 144 Query: 123 SASAVIILESYFE 135 +A IL+SYF+ Sbjct: 145 QVAAQHILQSYFD 157 >UniRef50_A6P0R0 Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6P0R0_9BACE Length = 139 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 44/133 (33%), Positives = 66/133 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G G+A+ A I ++ I RL+KE +E+++G P Sbjct: 2 RIMAIDYGDARTGIAISDPTGLLAGYTTVIHSRKSEVVAEEIARLVKEHGVEELVMGFPR 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE P R FA ++ G+ L DER +TVEA + L G +K VD+ Sbjct: 62 NMDGTEGPRAELYRAFAQQVGQVTGLTPVLWDERRTTVEAHNILHASGKRMKQHKKTVDA 121 Query: 124 ASAVIILESYFEQ 136 +A +ILE Y + Sbjct: 122 VAATLILEGYLTR 134 >UniRef50_Q7UG74 Putative Holliday junction resolvase n=1 Tax=Rhodopirellula baltica RepID=RUVX_RHOBA Length = 173 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 66/134 (49%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L + D+GT IGVA+ A PL D L K + +VGL Sbjct: 15 TGRLASVDYGTVRIGVAICDPDWILASPLEVHPVSTPEKDAQYFIDLAKSERIAAWVVGL 74 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++ DG E + +RKFA + G+ +L DER +TV A + + + R K +V Sbjct: 75 PIHCDGGESDKSKESRKFAAWLKETTGLPTRLFDERFTTVAANAKIRQGKTTRKKTKQRV 134 Query: 122 DSASAVIILESYFE 135 D+ +A ++LES+ E Sbjct: 135 DAVAAQVLLESFLE 148 >UniRef50_Q0VTI2 Putative Holliday junction resolvase n=2 Tax=Alcanivorax RepID=RUVX_ALCBS Length = 133 Score = 161 bits (408), Expect = 8e-39, Method: Composition-based stats. Identities = 71/130 (54%), Positives = 93/130 (71%), Gaps = 5/130 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LAFD+GT+ IGVA G + GTA PL A+ ++ P+W+ I LLKEW+P+ ++VGLPLN Sbjct: 2 ILAFDYGTQKIGVASGNELLGTATPLKALPCKNTQPNWDDIAALLKEWEPEALVVGLPLN 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG++ T RARKFANR+HGRFG +V L DERLST EAR G +A ++ VDS Sbjct: 62 MDGSDSESTVRARKFANRLHGRFGKKVWLIDERLSTREARER---TGIKKADSR--VDSM 116 Query: 125 SAVIILESYF 134 +AVII E +F Sbjct: 117 AAVIIAEGFF 126 >UniRef50_Q0ANY7 Holliday junction resolvase YqgF n=2 Tax=Hyphomonadaceae RepID=Q0ANY7_MARMM Length = 151 Score = 160 bits (407), Expect = 1e-38, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 68/134 (50%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L+A D G+K+IGVA G + P+ IK T D + LL E Q I++GLP Sbjct: 12 GPLIALDPGSKTIGVAACGASRGLSTPVETIKRTKFTADAERVFALLDERQAVAIVMGLP 71 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +NMDG+E P R A + + + DERLST EA L G R K +D Sbjct: 72 VNMDGSEGPRVQSVRAMARNLMRLRDLPIAFQDERLSTFEAEEKLISAGVRRDKRKDIID 131 Query: 123 SASAVIILESYFEQ 136 + +A IL+S ++ Sbjct: 132 AHAAANILQSALDR 145 >UniRef50_Q4JVF6 Putative Holliday junction resolvase n=3 Tax=Corynebacterium RepID=RUVX_CORJK Length = 155 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GT IGVA+ A P+ I+A D + + ++ EI+VGL Sbjct: 14 RGRRLGLDVGTVRIGVAISDPDCILATPVETIQATADDADVQRVVEICRDNFVVEIVVGL 73 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P+ + G T A +FA + + V++ DER+ST+ A G + K Sbjct: 74 PVALRGNHTQSTLNAEEFARLVKEELPDIPVRMVDERMSTMAATHAFHASGVNSKKGRKK 133 Query: 121 VDSASAVIILESYFE 135 +D A+AV IL+ + + Sbjct: 134 IDQAAAVHILQGWLD 148 >UniRef50_B1H0H2 Putative Holliday junction resolvase n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RUVX_UNCTG Length = 140 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D+G K IG+A+ + TA P +K + I + K I++GLPL Sbjct: 3 RIMGIDYGLKRIGIAITDFLRITASPFDTVKNVSLKKNALKILEIAKNRDVSIIVLGLPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGKVD 122 NM+GTE + RKF +I +EV DERL+TV+A L E R KG D Sbjct: 63 NMNGTEGGMAETVRKFIEKIKFLSDIEVTTVDERLTTVQAERMLIEEADISREKRKGIKD 122 Query: 123 SASAVIILESYFE 135 A +IL++Y + Sbjct: 123 KVVAALILQTYLD 135 >UniRef50_A0Z2R4 Holliday junction resolvase-like protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z2R4_9GAMM Length = 132 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 61/132 (46%), Positives = 86/132 (65%), Gaps = 3/132 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +AFD+G K IGVAVG + T PL + A+DG P+W I L KEWQP++++VG PLNM Sbjct: 1 MAFDWGLKRIGVAVGNTLLATCEPLCVLNARDGVPNWAAIAELFKEWQPEQLVVGDPLNM 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 D + +T RAR+F+ ++ GRF + V L DERL++ EAR L EQG G VD+ + Sbjct: 61 DDSVAEITRRARRFSRQLEGRFNLPVSLTDERLTSREARIQLEEQGLP---YHGAVDAHA 117 Query: 126 AVIILESYFEQG 137 A +IL+S+ + Sbjct: 118 AQLILQSWLAEQ 129 >UniRef50_P74662 Putative Holliday junction resolvase n=29 Tax=Cyanobacteria RepID=RUVX_SYNY3 Length = 152 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 4/142 (2%) Query: 1 MSGTL--LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEII 58 MS + L D G K IGVA A + I D I++L++E + ++ Sbjct: 1 MSKKVAALGLDVGRKRIGVAGCDGTGLIATGITTIVRSSYDQDIAQIKQLVEERNVNLLV 60 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 VGLP M G + +KFA R+ + + ++ DERLS+VEA + L + + + +K Sbjct: 61 VGLPYTMAGEIGSQAKQVQKFARRVAEQLHLPLEYMDERLSSVEAENQLKARKRFSSYDK 120 Query: 119 GKVDSASAVIILESYFE--QGY 138 G +D +A IIL+ + + + + Sbjct: 121 GLIDQQAAEIILQQWLDLRRSH 142 >UniRef50_Q8DGI8 Putative Holliday junction resolvase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=RUVX_THEEB Length = 151 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 64/131 (48%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L D G K IGVA R+ A + I ++ D + R+ +E +++IVGLP Sbjct: 4 VLGLDLGRKRIGVAGCDRLGQLATGITTIYRRNFASDVAQLRRICQERGVEKLIVGLPYT 63 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +DG + + A +I + V+ DERL++ +A L ++ +K VD Sbjct: 64 LDGQLGSQARQVQHLAEKIGAALNLPVEYIDERLTSFQAEEILKQRRRSPRHHKDLVDQI 123 Query: 125 SAVIILESYFE 135 +A +IL+ + + Sbjct: 124 AAALILQQWLD 134 >UniRef50_B2IEC1 Putative Holliday junction resolvase n=4 Tax=Alphaproteobacteria RepID=RUVX_BEII9 Length = 165 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 57/135 (42%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 L+ D GTK+IG+++ A PL I+ T D + L ++ ++GL Sbjct: 18 RQRLIGIDLGTKTIGLSLSDVERRIATPLETIRRTKFTKDAERLLALADQFDVAAFVIGL 77 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLNMDG+ P F + G DERLST L Q RA V Sbjct: 78 PLNMDGSAGPRVQATEAFVRSLSGLTSRPFCYWDERLSTAAVTRDLIAQDASRAKRAAVV 137 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ ++ Sbjct: 138 DKLAAAFILQGALDR 152 >UniRef50_B5EQG5 Holliday junction resolvase YqgF n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EQG5_ACIF5 Length = 143 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 50/136 (36%), Positives = 74/136 (54%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG LL DFG + IG+AV + + ++ + PDW+ R+LKEWQP +++GL Sbjct: 5 SGPLLGIDFGERRIGIAVLGESGLAPQGVATLRNGECGPDWDGFARILKEWQPRALVLGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+E + R RKFA + RF + + DERLS+ A L E+ + Sbjct: 65 PLHMDGSEGFMVGRVRKFAESLQRRFPLPIHWVDERLSSHAADLVLKERELSHKKRGRLL 124 Query: 122 DSASAVIILESYFEQG 137 D A+A IL ++ G Sbjct: 125 DQAAACEILWTFHNAG 140 >UniRef50_Q5NPF1 Putative Holliday junction resolvase n=3 Tax=Zymomonas mobilis RepID=RUVX_ZYMMO Length = 163 Score = 158 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GTK+IG+A+ A P I+ + T D ++ + +++ Q +++GL Sbjct: 26 KGRLAGLDVGTKTIGLALCDSQWIIASPAETIRRKKFTLDLELLRQFVEKQQVKGLVIGL 85 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PLN+DG++ P T R FA + + V + DER ST L E RA V Sbjct: 86 PLNLDGSDSPRTQSVRAFAKNVA-PLSLPVLMWDERWSTKAVTRTLLEADASRARRSEVV 144 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ + Sbjct: 145 DKMAAAYILQGAIDS 159 >UniRef50_B6J6M4 Putative Holliday junction resolvase n=6 Tax=Coxiella burnetii RepID=RUVX_COXB1 Length = 141 Score = 158 bits (402), Expect = 4e-38, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 88/132 (66%), Gaps = 2/132 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L FDFG K IGVAVGQ +T +A + +KAQDG DW I+ L++ W + ++VG+P NM Sbjct: 9 LGFDFGMKRIGVAVGQTVTHSANAIAILKAQDGVLDWEKIKMLIETWHANVLVVGIPYNM 68 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+EQ LT ARKFA ++ RFG+ + + DERL+T+EA+ +EQG + +D+ + Sbjct: 69 DGSEQTLTFAARKFARKLQTRFGLPLSMVDERLTTIEAKRQWYEQGLTKRPQ--HLDNYA 126 Query: 126 AVIILESYFEQG 137 A +ILE + ++ Sbjct: 127 AKLILEQWLQEQ 138 >UniRef50_C9R8A9 Holliday junction resolvase YqgF n=1 Tax=Ammonifex degensii KC4 RepID=C9R8A9_AMMDK Length = 146 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G K+IGVAV TA+ L + + D + L + ++ +E+++GLP Sbjct: 2 RILALDVGDKTIGVAVSDPFGLTAQGLKVLHRGEEAEDVQHVLELARRYEVEEVVIGLPR 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G P + +F + + G+++ DER +T EA L R + D Sbjct: 62 TLAGEIGPQAQKVLRFGELLAQQ-GLKIIYWDERFTTKEAEKVLLAADVSRKKRRRVKDI 120 Query: 124 ASAVIILESYFEQ 136 +AV++LE+Y E+ Sbjct: 121 LAAVLLLEAYLEK 133 >UniRef50_B8E227 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus turgidum DSM 6724 RepID=RUVX_DICTD Length = 141 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 69/133 (51%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G K IG+A+ + A+ L + +D N +++L+KE+ EI++G P+ Sbjct: 2 RVLAIDWGEKYIGLAISDPLRIIAQGLDVWEIKDEEDFVNRLKKLIKEYNVSEIVLGYPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ G E T + A RI + +K DER +T+EA L E R K + Sbjct: 62 SLRGHENEKTKKIEYVAERIKTVVNLPIKFVDERFTTMEAERVLLEGDIKRRDRKLLKNK 121 Query: 124 ASAVIILESYFEQ 136 +AVIIL+ Y + Sbjct: 122 QAAVIILQKYLDS 134 >UniRef50_B9JDM7 Putative Holliday junction resolvase n=36 Tax=Alphaproteobacteria RepID=RUVX_AGRRK Length = 164 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 63/132 (47%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D GTK+IG+A+ A P P IK T D + ++ + ++GLP+N Sbjct: 19 IAGLDLGTKTIGLAMSDLGRRFATPRPVIKRVKFTQDAQTLLAFAEKEKVAAFVIGLPMN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ P R F + + + DERLSTV A L E RA ++DSA Sbjct: 79 MDGSTGPRVQATRAFVRSMADKTALPFVYWDERLSTVAAERALLEMDVSRAKRAERIDSA 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASFILQGALDR 150 >UniRef50_Q2SPG9 Putative Holliday junction resolvase n=13 Tax=Gammaproteobacteria RepID=RUVX_HAHCH Length = 158 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 91/132 (68%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FDFG K G AVGQ ++ TA PL I AQDG P W IE LL+EW+P +IVG PL Sbjct: 3 TVVGFDFGLKRFGAAVGQSVSMTASPLKEIPAQDGIPRWEAIEALLEEWKPALVIVGEPL 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ + RARKFA R+HGR+ + V++ DERL++ EA+S + E+ G R + VDS Sbjct: 63 NMDGSVSEMALRARKFARRLHGRYNLRVEMADERLTSSEAKSMVRERYGQRDFGRFAVDS 122 Query: 124 ASAVIILESYFE 135 +AV I+ES+ E Sbjct: 123 IAAVFIVESWLE 134 >UniRef50_C8P0P3 Holliday junction resolvase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P0P3_ERYRH Length = 144 Score = 158 bits (400), Expect = 7e-38, Method: Composition-based stats. Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI-IERLLKEWQPDEIIV 59 M G ++ D G+K+ GVA+ + A P+ + + + ++ L+K+ + I + Sbjct: 1 MIGKIIGLDLGSKTCGVALSDGLGMYAHPVETLYYKVSIDELKEPLDSLIKKERVKVIAL 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G P M+ + +F + F EV L DERL++V A L +Q R K Sbjct: 61 GFPKMMNNDVGERAQISEEFKKTLESWFNCEVVLIDERLTSVVANRQLIDQDVSRKKRKK 120 Query: 120 KVDSASAVIILESYFEQ 136 VD +AV IL++Y ++ Sbjct: 121 VVDQLAAVHILQTYLDK 137 >UniRef50_B8KU73 Putative uncharacterized protein n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KU73_9GAMM Length = 143 Score = 158 bits (400), Expect = 7e-38, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 89/132 (67%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ FD+G + IGVA+G + G +PL + A+DG PDW+ IERL+ EWQPD ++VG PL Sbjct: 7 TVMGFDYGLRQIGVAIGNTLLGQGKPLAIVTARDGKPDWSQIERLIGEWQPDHLVVGKPL 66 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG++ + ARA KF+ +++GRF V L DERL++ EA+S ++G +D Sbjct: 67 NMDGSDSEMGARAAKFSRQLNGRFAKPVDLVDERLTSREAKSQSRDRGHNGNYTTDPIDD 126 Query: 124 ASAVIILESYFE 135 +A +IL ++FE Sbjct: 127 EAAALILNTWFE 138 >UniRef50_A3ZND8 Putative uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZND8_9PLAN Length = 159 Score = 157 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 60/134 (44%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G + DFGT IGVA+ A P + D E L K + +VGLP Sbjct: 13 GRIAGIDFGTVRIGVAITDPDRILASPFENYTRRSLKIDRQYFEELAKLERIVLFVVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 ++M G E + ARKF + GV + +DER +T A+ L G + K +D Sbjct: 73 VHMSGNESGKSGEARKFGQWLGRITGVPIVYYDERFTTSIAKDYLAGLGMTKQKKKAVID 132 Query: 123 SASAVIILESYFEQ 136 +A I+L +Y E Sbjct: 133 KLAAQILLTAYLEN 146 >UniRef50_B8D9X0 Putative Holliday junction resolvase n=8 Tax=Enterobacteriaceae RepID=RUVX_BUCA5 Length = 135 Score = 157 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 68/132 (51%), Positives = 101/132 (76%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFG K IGVAVG+ IT RPL + AQ+G P+W +++ L++ WQP I+VGLPLN Sbjct: 3 VIAFDFGIKKIGVAVGENITKKGRPLSVLNAQNGCPNWQLVKNLIQYWQPQFIVVGLPLN 62 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 ++GT+Q +T ++ KFAN + +F + VK+HDERL+TVEA+S +F++ G++ L + K+ S Sbjct: 63 INGTKQKITNKSEKFANLLKYKFNIVVKMHDERLTTVEAKSIIFKKNGFKGLKEEKIHSC 122 Query: 125 SAVIILESYFEQ 136 +AVIILES+F Q Sbjct: 123 AAVIILESWFNQ 134 >UniRef50_Q6MD02 Putative Holliday junction resolvase n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=RUVX_PARUW Length = 150 Score = 157 bits (399), Expect = 9e-38, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 7/140 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD-----GTPDWNIIERLLKEW--QPDE 56 +L DFG IG+A A PL + + I +L + + +E Sbjct: 9 RILGIDFGMSRIGLAQSDERKIIAMPLITVHTEKKSEQTVIKLLETISQLCETQKCEIEE 68 Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 I++GLPL M G L + FA + + ++L DERL+TV+A L E R Sbjct: 69 IVIGLPLMMSGRTGFLADEVKHFAQLLQQLTPIPIRLWDERLTTVQAERSLRESQLTRKK 128 Query: 117 NKGKVDSASAVIILESYFEQ 136 VD SA IIL+SY + Sbjct: 129 RSKVVDIVSASIILQSYLDS 148 >UniRef50_Q0ABT4 Holliday junction resolvase YqgF n=3 Tax=Ectothiorhodospiraceae RepID=Q0ABT4_ALHEH Length = 144 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 68/137 (49%), Positives = 93/137 (67%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 +SGT LAFD G + IGVAVG+ +TG R L + A+ G PDW + RLL EW+P ++VG Sbjct: 5 VSGTWLAFDHGDRRIGVAVGEALTGGGRALITLSARAGQPDWEEVGRLLAEWRPQGVVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ DG++ T ARKFA R+HGR+G+ V+L DERLS+ EA + L E+ G G Sbjct: 65 LPLHADGSDSESTRAARKFAQRLHGRYGLRVELVDERLSSHEAAARLSERRGRPTRRPGA 124 Query: 121 VDSASAVIILESYFEQG 137 +DS +A +ILE++F Q Sbjct: 125 LDSEAARVILETWFSQQ 141 >UniRef50_D1CDK4 Holliday junction resolvase YqgF n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDK4_THET1 Length = 149 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K IG+A+ A I D I R+ + ++I+VGLPL Sbjct: 2 VVMGIDPGRKRIGIALSDPTGLLATAYKVIHRTTSDRDLEEIRRIAEHENVEKIVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL---NKGK 120 +M G E RAR+ A +I G+ V+L DERL++VEA L E K Sbjct: 62 HMSGYEGEEAVRARELAKQIETATGLPVELVDERLTSVEAERRLLESRRKLGKLGRKKLA 121 Query: 121 VDSASAVIILESYFEQ 136 +D+ +A ++L+ Y +Q Sbjct: 122 IDAEAAAVLLQDYLDQ 137 >UniRef50_C5JAL6 Resolvase family protein, holliday junction-type, YqgF-like n=1 Tax=uncultured bacterium RepID=C5JAL6_9BACT Length = 161 Score = 156 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 45/139 (32%), Positives = 71/139 (51%), Gaps = 4/139 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 LLA D+G + +GVAV + + PL I ++ + + L+ + I+VG P Sbjct: 12 QRLLAIDYGDRFLGVAVSDIMWHISTPLFPIDSKSCNA-FQALGALIDQHACGGIVVGYP 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 +NM+G+E P R R+F +I F + + L DERLSTV A + E R K KV Sbjct: 71 INMNGSEGPACERVREFCQKIKKFFPSIPIGLFDERLSTVAAERNMVEADMSRKKRKQKV 130 Query: 122 DSASAVIILESYFE--QGY 138 DS +A +L+ + + + Sbjct: 131 DSLAASYVLQGTLDYLRNH 149 >UniRef50_A4BIS9 Holliday junction resolvase-like protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIS9_9GAMM Length = 142 Score = 156 bits (397), Expect = 2e-37, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 85/136 (62%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ L FD+G IGVA GQ T TA L I+A+DG P+W I++L++EW+P +VG Sbjct: 1 MAELWLGFDWGLGWIGVASGQTETYTASKLKPIRARDGIPNWTDIDQLVQEWRPTGFVVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 +P NMDG+E + RARKF R+HGRFG+ + DERL+T EA + + Sbjct: 61 IPYNMDGSESQMVVRARKFRKRLHGRFGLPAEEADERLTTREAWQHMNPASSLKKAKADD 120 Query: 121 VDSASAVIILESYFEQ 136 +DS +A IIL+S+ EQ Sbjct: 121 LDSVAAQIILQSWLEQ 136 >UniRef50_Q49Y54 Putative Holliday junction resolvase n=89 Tax=Bacteria RepID=RUVX_STAS1 Length = 142 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 3/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPA--IKAQDGTPDWNIIERLLKEWQPDEII 58 + ++ D G+K++G+A+ + TA+ L I ++ + +++K ++ Sbjct: 2 LKHKIIGLDVGSKTVGIAISDLMGWTAQGLDTLRIDEENNELGIEALVKIIKRDNVGTVV 61 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN 117 +GLP NM+ + + ++ ++ +E+ + DERLST+ A L E R Sbjct: 62 IGLPKNMNNSIGFRGEASLQYKEQLQEALPSLEIIMWDERLSTMAAERSLLEADVSRQKR 121 Query: 118 KGKVDSASAVIILESYFEQ 136 K +D +AV IL+ Y + Sbjct: 122 KKVIDKMAAVFILQGYLDS 140 >UniRef50_D0L0G6 Holliday junction resolvase YqgF n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L0G6_HALNC Length = 165 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 3/140 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-DWNIIERLLKEWQPDEIIV 59 + GT LAFD+G IGVAVG+++ G+ARPL + ++ W+ I +LL EW+P +++ Sbjct: 6 LPGTWLAFDYGAWRIGVAVGEQMLGSARPLTTLHHRNAHQIQWDAIGQLLDEWRPVGLVL 65 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK- 118 G PL G P+ R+F R+ GRF + V+ DERLS+ A+ L + G + K Sbjct: 66 GWPLMDSGETYPVAEFIRRFGRRLDGRFNLPVRYVDERLSSEHAQMLLTTRHGKDKVKKS 125 Query: 119 -GKVDSASAVIILESYFEQG 137 +D+ +A IILE++F Q Sbjct: 126 PSMIDAQAAAIILETFFSQS 145 >UniRef50_Q601M3 Putative Holliday junction resolvase n=4 Tax=Mycoplasma hyopneumoniae RepID=RUVX_MYCH2 Length = 143 Score = 156 bits (395), Expect = 3e-37, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLP--AIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +LA D G K+ G A+ + + PL D + I +KE+ +++G Sbjct: 6 RILALDLGIKTCGFAISDQNWKISYPLEQFNFNRYDFASVISRIAFWMKEYPISILVLGY 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G P T FA+ + + ++V DERL+T +A++ L + G + + Sbjct: 66 PLTLAGKISPRTKMVEYFADLVKKNYEIKVVFQDERLTTKQAQTFLLDLGISFKKRQKVI 125 Query: 122 DSASAVIILESYFE 135 D +A IILE + Sbjct: 126 DKLAAQIILERFLN 139 >UniRef50_A6U816 Putative Holliday junction resolvase n=76 Tax=Alphaproteobacteria RepID=RUVX_SINMW Length = 165 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 62/132 (46%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 + D GTK+IG++V A P I+ D + ++ + ++GLP+N Sbjct: 19 VAGLDLGTKTIGLSVSDLGRRFATPRDVIRRVKFGIDAQALLFFAEKEKVAAFVIGLPVN 78 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+E P R F + R + L DERLSTV A L E R ++DSA Sbjct: 79 MDGSEGPRCQATRAFVRTMGERTDIPSVLWDERLSTVAAERVLIEMDVSRKKRADRIDSA 138 Query: 125 SAVIILESYFEQ 136 +A IL+ ++ Sbjct: 139 AASFILQGALDR 150 >UniRef50_B9DNH1 Putative Holliday junction resolvase n=11 Tax=Firmicutes RepID=RUVX_STACT Length = 142 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 3/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPA--IKAQDGTPDWNIIERLLKEWQPDEII 58 ++ ++ D G+K++GVAV + TA+ L I ++ + ++K+ D ++ Sbjct: 2 LTHKIIGLDVGSKTVGVAVSDLMGWTAQGLDTLRINEEENELGITKLAEIIKKEDADTVV 61 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 +GLP NM+ + + K+ + + V + DERLST+ A L E R+ Sbjct: 62 IGLPKNMNNSIGFRGEASLKYKEELLKILPDINVVMWDERLSTMAAERSLLEADVSRSKR 121 Query: 118 KGKVDSASAVIILESYFEQ 136 K +D +AV IL+ Y + Sbjct: 122 KKVIDKMAAVFILQGYLDS 140 >UniRef50_C3XAN4 Holliday junction resolvase n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3XAN4_OXAFO Length = 149 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 10/135 (7%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LAFDFG K IG A+G ++ TARPL I A+ + I L++EWQP ++IVGLP Sbjct: 22 GVILAFDFGLKRIGTAIGNELSRTARPLEIINAEANDIRFAKIGELIEEWQPVKLIVGLP 81 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DGTE +T R ++FAN++ GRF +E+ + DER S+ D Sbjct: 82 SYPDGTEHEMTRRCKRFANQLRGRFSLEIIMVDERYSSSVLHF----------QRGKADD 131 Query: 123 SASAVIILESYFEQG 137 + +A +IL+ YF++ Sbjct: 132 AHAAALILQQYFDES 146 >UniRef50_Q28QB4 Putative Holliday junction resolvase n=2 Tax=Alphaproteobacteria RepID=RUVX_JANSC Length = 160 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 4/139 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M G L+ D GTK+IGVA+ R+ +A L +K + D + + L+ + + II+G Sbjct: 16 MRG-LIGLDLGTKTIGVALSDRLLTSASALETVKRKKFGVDADALAGLIAKHEVGGIILG 74 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG---VEVKLHDERLSTVEARSGLFEQGGYRALN 117 LP NMDG+E P R FA + R + + DERLSTV A L R Sbjct: 75 LPRNMDGSEGPRAQATRAFALNLSRRGDFAHLALGFWDERLSTVAAERALIAADTSRKRR 134 Query: 118 KGKVDSASAVIILESYFEQ 136 +D+ +A IL+ ++ Sbjct: 135 SEVIDAVAASYILQGALDR 153 >UniRef50_Q2G9X2 Putative Holliday junction resolvase n=4 Tax=Sphingomonadales RepID=RUVX_NOVAD Length = 155 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 68/133 (51%), Gaps = 1/133 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ D GTK+IGVA+ R A I+ D I ++ E I++GLP Sbjct: 17 GSLIGLDTGTKTIGVALCDREWRFATAGTTIRRTKFAADKAQIRAIVAERGVKGIVIGLP 76 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LNMDG+E P + AR A + G+ + L DER +T A + EQ RA ++D Sbjct: 77 LNMDGSESPRSQGARAMARNLED-LGLPILLWDERWTTQAAERAMIEQDFSRAKRAERID 135 Query: 123 SASAVIILESYFE 135 S +A +IL+ + Sbjct: 136 SHAAALILQGAID 148 >UniRef50_C8W9V1 Holliday junction resolvase YqgF n=8 Tax=Coriobacteriaceae RepID=C8W9V1_ATOPD Length = 140 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 66/134 (49%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G IGVAV A P+ + AQ+ + +L++W+P+ ++ G P Sbjct: 2 RVLALDIGEVRIGVAVSDPDGAIASPVCVLPAQEVLSHARTFKTVLEDWEPELLLCGRPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + P + A +I + ++ DERLS+ EA+ L QG +GKVD Sbjct: 62 TLAGEDGPQAQKITVQAEQIAKNCQLPLEFTDERLSSAEAKKILRAQGLSEKAMRGKVDM 121 Query: 124 ASAVIILESYFEQG 137 +A + L+S+ + Sbjct: 122 VAASLFLQSWLDAQ 135 >UniRef50_Q8AAP5 Putative Holliday junction resolvase n=29 Tax=Bacteroidetes RepID=RUVX_BACTN Length = 138 Score = 155 bits (392), Expect = 5e-37, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G K G+AV + A L + + N I + + + II+GLP Sbjct: 3 RIVAIDYGRKRTGIAVSDTLQLIANGLTTVPTHE---LLNFIGGYVAKEPVERIIIGLPK 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KGK 120 M+ F + RF + V+ DER ++V A + E G + K Sbjct: 60 QMNNEASENMKNIEPFVRSLKKRFPELPVEYVDERFTSVLAHRTMLEAGLKKKDRQNKAL 119 Query: 121 VDSASAVIILESYFEQ 136 VD SA IIL++Y E Sbjct: 120 VDEISATIILQTYLES 135 >UniRef50_C1DI77 Putative Holliday junction resolvase n=2 Tax=Gammaproteobacteria RepID=RUVX_AZOVD Length = 142 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 69/124 (55%), Positives = 88/124 (70%), Gaps = 2/124 (1%) Query: 1 MSGT--LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEII 58 MSG LL FD+GT+ IGVAVGQ ITG AR L +KAQ+G PDW+ +E+L+KEW+PD ++ Sbjct: 1 MSGPRLLLGFDYGTRQIGVAVGQAITGQARELCVLKAQNGVPDWSRVEQLVKEWRPDAMV 60 Query: 59 VGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 VGLPLNMDGT ++ RA +FA R+HGRFG+ V HDERL+T EA+ QG + Sbjct: 61 VGLPLNMDGTPSEMSERAERFARRLHGRFGLPVHTHDERLTTFEAKGYRLAQGQRDGYRR 120 Query: 119 GKVD 122 VD Sbjct: 121 RPVD 124 >UniRef50_D1R453 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R453_9CHLA Length = 155 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 7/142 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQ------ 53 + +++ D+G IG+A+ A L + A + + + Q Sbjct: 5 LPKRIVSLDYGLARIGIAISDESQTIASSLKTVAAEKKVERTVAKLVEEINAHQQRLACE 64 Query: 54 PDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY 113 +EI+VGLPL M G + F + + DERL+TV+A L E Sbjct: 65 IEEIVVGLPLLMSGKKGFQADEVLHFVELFKAATPIPIVTWDERLTTVQAERALREGSFN 124 Query: 114 RALNKGKVDSASAVIILESYFE 135 R +D+ +AV+IL++Y + Sbjct: 125 RKKRSKVIDAVAAVLILQNYLD 146 >UniRef50_D0WG11 Putative Holliday junction resolvase n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WG11_9ACTN Length = 171 Score = 154 bits (391), Expect = 8e-37, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 64/134 (47%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +A D G IG+A+ A PL + A + L+++W PD ++ GLP Sbjct: 20 RYMALDIGDARIGIAISDPAGRVASPLKVLPAAEVLGHAASFRMLVEDWMPDALVCGLPF 79 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G + P A ++ A RI + + DERLS+ EA+ L E G +GKVD Sbjct: 80 TLAGEQGPQAASLKERAQRIAKACDLPLYFSDERLSSSEAKRFLREGGYDERAMRGKVDM 139 Query: 124 ASAVIILESYFEQG 137 +A I L+S+ + Sbjct: 140 IAASIFLQSWLDSN 153 >UniRef50_B1C0S1 Putative uncharacterized protein n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C0S1_9FIRM Length = 139 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 3/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEWQPDEIIVGL 61 +L D G+++ G+A+ + A L + DG N + ++ + Q +++GL Sbjct: 3 KILGLDLGSRTCGIAMSDALGMLAHGLETYRFNDGNYKQAANYVVEIINKNQIKTVVLGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P +M+G + F + + G+ V L DERL+T A+ L R K Sbjct: 63 PKHMNGDLGERAQISIMFKEMLEKKVAGLNVVLVDERLTTKVAQDRLIFADVSRKKRKQV 122 Query: 121 VDSASAVIILESYFEQG 137 +D +AV IL+ Y + Sbjct: 123 IDKMAAVAILQGYLDAN 139 >UniRef50_Q2JKS4 Putative Holliday junction resolvase n=2 Tax=Synechococcus RepID=RUVX_SYNJB Length = 170 Score = 154 bits (390), Expect = 1e-36, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 63/131 (48%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D G + IGVA R+ A L I+ + + D ++ ++ Q ++VG+PL Sbjct: 17 LGLDVGNRRIGVAGSDRLGLLATGLGVIQRRSLSEDIAQVQEWIRRRQATVVVVGIPLLA 76 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + ++F + + + +E LST +A L E G KG +D S Sbjct: 77 DGSVGSQARKVQRFVRALQVAVDLPIVTVNEYLSTAQAEWDLREAGIPAKAQKGLIDQQS 136 Query: 126 AVIILESYFEQ 136 A +IL+++ ++ Sbjct: 137 AAVILQTWLDE 147 >UniRef50_C0W1N1 Possible Holliday junction resolvase n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0W1N1_9ACTO Length = 155 Score = 153 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG + D+G IGVAV + P ++ + + L+ E Q E+++G+ Sbjct: 4 SGVRIGVDYGKSRIGVAVTDPSGKISFPHTTLQFSPYGVHLDELLNLIVEKQAIEVVIGM 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P++++G E R FAN + + V L DERL+T +A +GL E G K K Sbjct: 64 PVHLNGKEGSSAEFVRDFANELAVEIPDIRVCLMDERLTTNQAHAGLSEMGVDNRARKNK 123 Query: 121 VDSASAVIILESYFE 135 +D +A IILE+ E Sbjct: 124 IDQLAASIILENAIE 138 >UniRef50_B8GP64 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GP64_THISH Length = 163 Score = 153 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 54/137 (39%), Positives = 84/137 (61%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T L D+G + IGVAVG R +G+ PL A+ +D PDW ++R ++EW+PD ++VG PL Sbjct: 19 TALGLDYGGRRIGVAVGSRESGSGSPLGAVSNRDDGPDWAALDRWVREWRPDVLVVGQPL 78 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY----RALNKG 119 N+DGT PL R ++F ++ R+ + V DER S+ +A L E R + KG Sbjct: 79 NLDGTPHPLAPRIQRFCEQLTERYTLPVARVDERFSSFDAEERLREARASGRRGRKVQKG 138 Query: 120 KVDSASAVIILESYFEQ 136 +D+ SA I+L+++F + Sbjct: 139 DIDALSAAILLDNWFSE 155 >UniRef50_C6XGE6 Holliday junction resolvase YqgF n=1 Tax=Candidatus Liberibacter asiaticus str. psy62 RepID=C6XGE6_LIBAP Length = 160 Score = 153 bits (389), Expect = 1e-36, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + + + D GTK IG+A+ A P P + + T + + I+GL Sbjct: 16 NQPIASIDLGTKRIGLAISDPGRRFAHPRPFLVRKKVTQTALELLSFITTENIAAFIIGL 75 Query: 62 PLNMDGTEQPLTARARKFA-NRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PLNM+G+E P R F N I + V DERL+TV A+ L + R K Sbjct: 76 PLNMNGSEGPRVHSTRAFVHNMIDRKVYVPFVFWDERLTTVSAQQILIDMNVSRKKRIQK 135 Query: 121 VDSASAVIILESYFEQ 136 VDS +A +IL+ ++ Sbjct: 136 VDSIAAALILQEVLDR 151 >UniRef50_D1Y3T4 RNAse YqgF n=2 Tax=Synergistaceae RepID=D1Y3T4_9BACT Length = 140 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 3/133 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D GT IGVAV + A+ + KA P + +ER + + ++VGLP+ Sbjct: 3 RIICLDVGTVRIGVAVSDPLGMFAQGIAVWKAD--GPWLDELERAFERYDTGCLLVGLPI 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 DGT P + I RF V V+ DER ST A S L E R K VD Sbjct: 61 REDGTIGPSAQHVQDVVKEIQRRFPMVTVRYWDERYSTCTATSYLLEGNVSRRKRKQSVD 120 Query: 123 SASAVIILESYFE 135 +A +IL+SY + Sbjct: 121 KIAAAVILQSYMD 133 >UniRef50_Q31EK3 Putative Holliday junction resolvase n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=RUVX_THICR Length = 134 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 82/135 (60%), Gaps = 7/135 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G ++ FDFG K IGVA+GQ IT TA P + ++DG PDW I RL +EW+P I+VG Sbjct: 5 IEGVVIGFDFGLKRIGVAIGQTITRTATPEAIVASKDGKPDWEHISRLFEEWKPSAIVVG 64 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP+ ++G EQ LT ARKF R+ GR+ V +E+LS++EA + Sbjct: 65 LPMRLNGEEQALTQPARKFGQRLSGRYQRPVYYIEEQLSSIEAEQR-------KTKTDQP 117 Query: 121 VDSASAVIILESYFE 135 +D +A IILE++ + Sbjct: 118 MDDHAAQIILENWLD 132 >UniRef50_A6GQ07 Holliday junction resolvase-like protein n=2 Tax=Burkholderiales RepID=A6GQ07_9BURK Length = 144 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 2/133 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LAFDFG K IGVA G +T TA + ++AQ+ + IE L+KEWQP+ ++VG+P Sbjct: 13 YLAFDFGLKRIGVAFGNSLTKTASGIAVVEAQNDEQRFAKIESLVKEWQPEGLVVGVPRQ 72 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG + LT R +FA ++ GRF + + DER ++ S + G NKG+VD Sbjct: 73 PDGADNELTTRCERFARQLEGRFALPCAMVDERYTSAIIESCM--GGKAARENKGRVDMG 130 Query: 125 SAVIILESYFEQG 137 SA +ILE +F +G Sbjct: 131 SACLILEQFFLEG 143 >UniRef50_UPI000050F766 Holliday junction resolvase-like protein n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050F766 Length = 150 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 67/133 (50%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 + D G+ IGVA A PL ++ D + ++ E++P E+++G P ++ Sbjct: 1 MGLDIGSVRIGVAASDPDGILATPLTVVRRTDEPAALKTLREIIDEYEPIELLIGDPKSL 60 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 DG+ + A A +FA RI ++L DER +TVEA L G + VD+ + Sbjct: 61 DGSARAAAATALEFAKRISAATATPIRLVDERFTTVEAHHALAAAGKNSRQRREIVDAQA 120 Query: 126 AVIILESYFEQGY 138 AVIIL++ E + Sbjct: 121 AVIILQNALEYEH 133 >UniRef50_A6T292 Hollyday junction resolvase n=2 Tax=Oxalobacteraceae RepID=A6T292_JANMA Length = 131 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 10/132 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FDFG K IGVAVG + A+PL I A + I L+++WQP IVGLP Sbjct: 3 TVLGFDFGLKRIGVAVGNTLLKQAQPLTIISAATNDAKFAAIAELVQQWQPALCIVGLPR 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG E +T R R+FAN++HGRF V L DER S+ +D Sbjct: 63 HPDGEEHEMTVRCRRFANQLHGRFNVATVLVDERYSSA----------VISHQRGELIDD 112 Query: 124 ASAVIILESYFE 135 +A IIL+ YF+ Sbjct: 113 QAAAIILQQYFD 124 >UniRef50_C8X295 Holliday junction resolvase YqgF n=2 Tax=Desulfovibrionales RepID=C8X295_DESRD Length = 142 Score = 152 bits (386), Expect = 3e-36, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 62/134 (46%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L DFG K +G+A+ PL ++ + + ++ + + +++GLP Sbjct: 2 RYLGIDFGLKRVGLALSDSQATVVTPLATVQRSTRQALFEELLAYIETYAIEAVVIGLPY 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +++GT T +AR F + R + + DE L++ A L E G R K +D Sbjct: 62 DLEGTATLTTRQARNFGTSLARRIALPIYYVDEVLTSEFAGEALREAGVPRHKRKDLLDQ 121 Query: 124 ASAVIILESYFEQG 137 +AV ILES+ G Sbjct: 122 HAAVAILESFLASG 135 >UniRef50_C1TMF8 Putative uncharacterized protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TMF8_9BACT Length = 138 Score = 151 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ ++A D GT IGVA+ + A+ + A+ + + L+ ++VG Sbjct: 1 MTRRIVALDMGTVRIGVAMSDPLGSFAQGVAVWDAEGD--WLSDLRDLVTSRDVSTVVVG 58 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP+ +GT+ P + F +E+ + DER ++ A L E R KG Sbjct: 59 LPIRENGTKGPSAENVEAKTEAVREAFPDLEIVMWDERYTSTIANRVLIEGDVSRKKRKG 118 Query: 120 KVDSASAVIILESYFEQ 136 +VD +A +IL+ Y + Sbjct: 119 QVDKVAATVILQGYLDS 135 >UniRef50_A3HX36 Holliday junction resolvase-like protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HX36_9SPHI Length = 137 Score = 151 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 7/138 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D GTK G+AV + A PL I + + I+ + + + D +++GLP Sbjct: 3 RVLAIDLGTKRTGLAVTDPLKMLANPLETI---ETFKLIDFIKAYIAKEEVDTLVLGLPT 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK-- 120 ++G + +T + ++ F +V+L DER ++ A + G + + K Sbjct: 60 KLNGKDNEMTPKVMAMKTKLEKNFPSQKVELVDERFTSKMAMQSMITMGSKKKDRREKAG 119 Query: 121 -VDSASAVIILESYFEQG 137 +D SA IIL+SY E+ Sbjct: 120 NLDKVSAAIILQSYLERQ 137 >UniRef50_B2URD1 Holliday junction resolvase YqgF n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2URD1_AKKM8 Length = 141 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 2/132 (1%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L D+G IG+A + A P+ I + I +L++E +++GLP+ M Sbjct: 8 LGIDYGEARIGIAATDPVGIMAHPVETIHRHQTDG-ISRIVQLVQERGIRTLVLGLPVRM 66 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DGTE A+ R F + G+ + DE L+TV A+ L G + +D Sbjct: 67 DGTEGTAAAKVRAFGRELAAALPGLPLIFMDECLTTVIAQEKLHAAGKKAKNFRPIIDQV 126 Query: 125 SAVIILESYFEQ 136 +AV IL ++ + Sbjct: 127 AAVEILNTWLDS 138 >UniRef50_C0GL40 Holliday junction resolvase YqgF n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GL40_9DELT Length = 140 Score = 151 bits (383), Expect = 6e-36, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 59/131 (45%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L DFG K +G+AV PL I + + +++E + I++GLPL Sbjct: 2 KYLGIDFGIKRVGLAVSDEKGKMVFPLKTIHRSTRENLFLELLNIIQERGIEAIVLGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG + +A F + R + + +E +++EA L G K +D Sbjct: 62 GPDGEKSLTCRQAENFMQSLDRRTDLPIYTVNEAYTSMEAEDILNRCGIRVEKQKESLDQ 121 Query: 124 ASAVIILESYF 134 A+AVIILES+ Sbjct: 122 AAAVIILESFL 132 >UniRef50_B0VFM1 Putative Holliday junction resolvase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VFM1_9BACT Length = 138 Score = 151 bits (382), Expect = 8e-36, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 66/135 (48%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G +LA D+G K IG+A+ ++PL + + +++L+ Q +I+G+ Sbjct: 4 KGRILALDYGEKRIGIALSDPNRIFSKPLCVLSNKGFEQLVEELKKLITLHQVTLLIIGI 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P +DG+ P T ++ NR+ + V+ DER ST EA L + G K Sbjct: 64 PYAIDGSITPKTEECQQILNRLKDVLSISVEGFDERYSTWEANEELKKMGYNWRQAKEIK 123 Query: 122 DSASAVIILESYFEQ 136 D+ SA +IL+ + Q Sbjct: 124 DAMSAAMILKEFLNQ 138 >UniRef50_Q493F4 Putative Holliday junction resolvase n=2 Tax=Candidatus Blochmannia RepID=RUVX_BLOPB Length = 144 Score = 150 bits (381), Expect = 9e-36, Method: Composition-based stats. Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 2/137 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++ FDFGTK IGVA+GQ++T TA+PL +++Q G P+W I + W+P +VGLP Sbjct: 8 GIVMGFDFGTKHIGVAIGQKLTCTAQPLTVLQSQSGVPNWKRIRDIYNTWKPMIFVVGLP 67 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR--ALNKGK 120 L +DG+EQP+T A+ FA ++ F V VK+HDER ST EAR F+ A + K Sbjct: 68 LKIDGSEQPITILAKIFAIQLKELFPVPVKMHDERFSTSEARLNYFKYYHDDLCARSNIK 127 Query: 121 VDSASAVIILESYFEQG 137 +++ +A +IL+S+ + Sbjct: 128 INAIAAGVILKSWLNKS 144 >UniRef50_D1B5H3 Holliday junction resolvase YqgF n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B5H3_THEAS Length = 142 Score = 150 bits (381), Expect = 1e-35, Method: Composition-based stats. Identities = 42/135 (31%), Positives = 64/135 (47%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D G IGVA+ A PL +K ++G P ++ L++ I+VGLP Sbjct: 6 GRVMALDLGEVRIGVALSDPSRSFASPLEVLKMEEGWPL--KVKELVERNSVTLIVVGLP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + DG+ P R + + VE+ DER +T A+ L E R KGKV Sbjct: 64 IRTDGSSGPEVQRVMGWLEELKAVVQQVEIVTVDERFTTSIAQRFLLEGDVRREKRKGKV 123 Query: 122 DSASAVIILESYFEQ 136 D +A ++L+ Y Sbjct: 124 DKVAAALMLQDYLNS 138 >UniRef50_A6L9R7 Putative Holliday junction resolvase n=35 Tax=Bacteria RepID=RUVX_PARD8 Length = 140 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K G+A + A + + + + + D +VGL Sbjct: 2 GRIIAIDYGRKRTGIAATDILQMIANGVATVPS---GEVVKYLSDYISREPVDLFVVGLR 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 M+ F + + V +DER ++V A + E G + KG Sbjct: 59 KQMNNEPSENMKYVEAFVTHLKRTIPSIPVTYYDERFTSVLAHKAMLEGGLKKKKRQDKG 118 Query: 120 KVDSASAVIILESYFEQ 136 VD SAVIIL++Y E Sbjct: 119 LVDEISAVIILQAYLES 135 >UniRef50_A8GU80 Putative Holliday junction resolvase n=15 Tax=Rickettsia RepID=RUVX_RICB8 Length = 154 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 65/135 (48%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L++ D+G+K IG+A+ + A PL I + +++++ I++GL Sbjct: 16 NAPLISIDYGSKKIGIAISNQERNIAMPLNIITEASKKAIIASLLEKIEQYKACGIVIGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P++M G + +A KFA + + + L DERL+T A + L G R Sbjct: 76 PIDMSGMQTEQSAIVIKFAEELTKSINLPIYLQDERLTTKAANNFLKSFGIKRKERNNND 135 Query: 122 DSASAVIILESYFEQ 136 D+ +A +ILE+ Sbjct: 136 DAVAASMILETVLNS 150 >UniRef50_B3EPT4 Putative Holliday junction resolvase n=8 Tax=Chlorobiaceae RepID=RUVX_CHLPB Length = 144 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 +LA D+G K G+A A+P+ II+ L+E ++IIVG P Sbjct: 7 KRILAIDYGKKRTGLAKTDPFCSFAQPVGTFP---PEKIITIIKSFLQENSVEKIIVGYP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRAL--NKG 119 LN DGT+ P+T F + F + V+ DE S+ +A L E G R KG Sbjct: 64 LNSDGTKNPMTGIIDGFIEELSAAFPDIPVEPIDEHGSSKQAGKVLIESGLSRKKRQRKG 123 Query: 120 KVDSASAVIILESYFEQ 136 ++DSA+A ++L+ Y E Sbjct: 124 RLDSAAACLLLQHYLEN 140 >UniRef50_A5CRZ4 Putative Holliday junction resolvase n=2 Tax=Clavibacter michiganensis RepID=RUVX_CLAM3 Length = 161 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 62/134 (46%), Gaps = 1/134 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD-GTPDWNIIERLLKEWQPDEIIVGL 61 G+ LA D G IG+A A P+ + G+ D I + E E++VGL Sbjct: 4 GSRLAVDVGKARIGLARSDPHGLIATPVETVPRDPAGSADVRRILAVATEIDCAELVVGL 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G T A FA R+ + V+L DERLSTV A+ L G K + Sbjct: 64 PLALSGRATASTDDAEGFARRLADATEIPVRLVDERLSTVSAQGALRASGRGSRKQKPVI 123 Query: 122 DSASAVIILESYFE 135 D +AVIIL+ E Sbjct: 124 DQVAAVIILQHALE 137 >UniRef50_Q2J822 Putative Holliday junction resolvase n=8 Tax=Actinomycetales RepID=RUVX_FRASC Length = 202 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 2/136 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGL 61 G + D G+ +GVA A P+ + + G D + + +++E Q E++VGL Sbjct: 24 GVRIGVDVGSVRVGVAASDPGGVLAVPVTTLARDRRGNADIDQLVLIVRERQAVEVVVGL 83 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P M G E R++A + R V V+ DERL+TV A + E+G + Sbjct: 84 PRQMSGQEGRAVRLVRQYAEVLAERIAPVPVRFVDERLTTVAAHRRMAERGVRSRARRSL 143 Query: 121 VDSASAVIILESYFEQ 136 VD +AV IL+ + Sbjct: 144 VDQEAAVQILQHDLDS 159 >UniRef50_Q8D337 Putative Holliday junction resolvase n=2 Tax=Enterobacteriaceae RepID=RUVX_WIGBR Length = 144 Score = 148 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 67/134 (50%), Positives = 96/134 (71%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L++FDFGTK+IGVA+GQ T T++PL ++ G P+W I ++ W+P IIVGLPLN Sbjct: 8 LISFDFGTKNIGVAIGQMKTNTSKPLESVSYVKGVPNWGKINNIILLWEPKYIIVGLPLN 67 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MDG+ Q T +A+KFA ++ +F + V +HDERL+T+EA+S LF++ GY+ L K +DS Sbjct: 68 MDGSYQTSTIKAKKFAKQLRNKFFMPVMMHDERLTTIEAKSVLFKKYGYKGLKKKLIDSE 127 Query: 125 SAVIILESYFEQGY 138 SAVIIL+S+ Y Sbjct: 128 SAVIILDSWMNSIY 141 >UniRef50_B3PM70 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCA5 Length = 147 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 47/141 (33%), Positives = 66/141 (46%), Gaps = 6/141 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEW----QPDEI 57 L D G K+ G A+ A L ++ N I+ L+E Q DEI Sbjct: 2 RKLCLDLGKKTCGFAISDVNQTIAIGLENFFYEEYHFYEVINRIKYYLEESEFQGQVDEI 61 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALN 117 I+GLPL MD +E T +KFA + + ++L DER ST A + L + G Sbjct: 62 ILGLPLRMDLSESKTTKMVKKFATVLAKNITLPIRLQDERQSTKNAEAILSQGGYNAKQK 121 Query: 118 KGKVDSASAVIILESYFEQGY 138 K K DS +A +ILE Y E+ + Sbjct: 122 KLKKDSLAAQLILEDYLERQH 142 >UniRef50_Q2KUT2 Putative Holliday junction resolvase n=5 Tax=Bordetella RepID=RUVX_BORA1 Length = 131 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 60/133 (45%), Positives = 83/133 (62%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 TLLAFDFG K IGVA+G +T ARPL I ++ + I+ LL+ W+P ++VGL L Sbjct: 5 TLLAFDFGEKKIGVAIGNTLTCHARPLEIIFSERRDERFGRIQALLEAWRPQRVVVGLAL 64 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG +QP T R R+FAN++HGRFGV V+L DER S++EA+ L D+ Sbjct: 65 ATDGGDQPATLRCRRFANQLHGRFGVTVELVDERGSSMEAQEKLGS--------HAPDDA 116 Query: 124 ASAVIILESYFEQ 136 +A IIL+ Y ++ Sbjct: 117 MAAAIILQRYLDR 129 >UniRef50_Q6AFA0 Putative Holliday junction resolvase n=9 Tax=Actinomycetales RepID=RUVX_LEIXX Length = 155 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 61/134 (45%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 SG L D GT IGV+ A P + D I ++ + EIIVGL Sbjct: 3 SGVRLGIDVGTVRIGVSCSDLHGTLATPYETVARSGDAADRRRIAEIVTDLGVVEIIVGL 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL + G TA A FA + G V+L DERLSTV A S L G ++ V Sbjct: 63 PLALSGVHTASTADAVAFAEALVVEVGAPVRLVDERLSTVSAHSALRSSGKNAKSSRPVV 122 Query: 122 DSASAVIILESYFE 135 D A+A IIL+ + Sbjct: 123 DQAAATIILQHALD 136 >UniRef50_A5CCV6 Putative Holliday junction resolvase n=2 Tax=Orientia tsutsugamushi RepID=RUVX_ORITB Length = 157 Score = 148 bits (375), Expect = 5e-35, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 1/136 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + +L DFG K +GVA+ A PL I A + N I+ + + I++G Sbjct: 15 IKKQILGIDFGEKKVGVAISNIEHTVAMPLQTILATNQD-RVNKIQEIAVAYNIGAIVIG 73 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP +DGTE T R + FAN++ + + + L DERL++ A + L R + Sbjct: 74 LPFKLDGTETSQTHRVKDFANKLANKLLLPIFLCDERLTSKAANNLLKIGNIKRKVRNAI 133 Query: 121 VDSASAVIILESYFEQ 136 D +A IILE ++ Sbjct: 134 DDRVAASIILEGALKR 149 >UniRef50_Q2GL11 Putative Holliday junction resolvase n=8 Tax=Anaplasmataceae RepID=RUVX_ANAPZ Length = 166 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 36/132 (27%), Positives = 60/132 (45%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L DFG + IG+A+ A P ++ D + +L+ +++G PL Sbjct: 18 RILGIDFGERKIGLALSDPTYLIAIPHSVYHRRNMRQDLGELSAVLRSEDAAVVVMGNPL 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E + R FA ++ + GV + LHDER +T A E G R ++ D Sbjct: 78 QSDGLEGEMCQIVRAFAQKLIKKSGVSIYLHDERYTTAMASRATREAGLRRKESQKIDDK 137 Query: 124 ASAVIILESYFE 135 SA ++L+ + Sbjct: 138 ISAALVLQQVLD 149 >UniRef50_B2V842 Putative Holliday junction resolvase n=4 Tax=Hydrogenothermaceae RepID=RUVX_SULSY Length = 145 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 6/135 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G K IGVAV TA PL I + + I L+K ++ +I++GLPL Sbjct: 3 RILGLDIGLKRIGVAVSDPFGVTATPLEFIL--NDEKVFEKINDLIKNYKISKIVIGLPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + G E ++F + +E+ DER ++ A L + K+ Sbjct: 61 TLKGEEGEQARYTKEFVENLKNHIPQDIEIIFVDERFTSSLAEKTLLQTKKKNKK--EKI 118 Query: 122 DSASAVIILESYFEQ 136 DS SAV IL++Y ++ Sbjct: 119 DSLSAVFILQTYLDR 133 >UniRef50_Q11X87 Putative Holliday junction resolvase n=8 Tax=Sphingobacteriales RepID=RUVX_CYTH3 Length = 152 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LAFDFGTK IG+A + A L + +D +++ L + +VGLP Sbjct: 3 RILAFDFGTKRIGIASTDPMQIIANALDTVHPKDV---VVYLKKYLNTEPVEAFVVGLPR 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFGV-EVKLHDERLSTVEARSGLFEQGGYRALNKGK-- 120 + E A + F N I F + DER ++ A + G + + K Sbjct: 60 TLQNEESSNAANVKAFINLIKKNFPQTPIYGVDERFTSSMAFDTMLAGGVSKKGRRDKAT 119 Query: 121 VDSASAVIILESYFEQ 136 +D SA IIL+S+ EQ Sbjct: 120 IDKISATIILQSFMEQ 135 >UniRef50_C8PUM0 Putative uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PUM0_9GAMM Length = 156 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 6/139 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T++ DFG +G+A+G +T TA PL K +G P+W+ + ++++ WQ II+GLPL Sbjct: 13 TVMGLDFGIAKMGIALGNTLTQTASPLMQFKMDNGKPNWDELLKIIESWQVSTIIIGLPL 72 Query: 64 NMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 NMDG+ L RA+KFA R+ + L DERL++ EA+S +E G ++ K Sbjct: 73 NMDGSASELGNRAKKFARRLKHHLEEAHRPRPIILADERLTSREAKSLAWEYGLIKSD-K 131 Query: 119 GKVDSASAVIILESYFEQG 137 +DS ++ I+L S+ G Sbjct: 132 EPIDSIASAIMLGSWLRSG 150 >UniRef50_Q0BZU8 Putative Holliday junction resolvase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=RUVX_HYPNA Length = 151 Score = 147 bits (372), Expect = 1e-34, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 63/134 (47%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D GT +IGVA RI A P+ I + P + + E +IVGLP Sbjct: 13 GVLLGIDPGTATIGVAATDRIRMMASPVETILKKKLAPSLERLLHIYDERAAVGLIVGLP 72 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LN+DG+ P R + + + V DER S+ EA + G R + ++D Sbjct: 73 LNVDGSMGPRAQSVRTLVSSLLKVRDLPVTFQDERYSSAEAGDIMRAAGATRRNREARID 132 Query: 123 SASAVIILESYFEQ 136 +++A +IL+ + Sbjct: 133 ASAAAVILQDALSR 146 >UniRef50_B1I373 Putative Holliday junction resolvase n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=RUVX_DESAP Length = 141 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 57/133 (42%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+ D G + IGVA+ A PL ++ D I ++ ++ + ++ GLP Sbjct: 2 RLMGLDIGDRRIGVALTDENGVAAYPLEVLERTSPEKDLRRITEIIDQYGVERVVAGLPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + G P + F +++ R V V DERL+T E L R + VD Sbjct: 62 TLSGQIGPQGDKVLSFLDKLRVRSTVPVITWDERLTTAEVEKLLVSADLGRRRRRKVVDK 121 Query: 124 ASAVIILESYFEQ 136 +A +IL SY Sbjct: 122 LAATLILNSYLNS 134 >UniRef50_Q316N1 Putative Holliday junction resolvase n=7 Tax=Desulfovibrionales RepID=RUVX_DESDG Length = 144 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 42/132 (31%), Positives = 61/132 (46%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+GT+ G+AV A P I + + +++E +P ++VGLPL Sbjct: 2 KYLGIDYGTRRTGIAVTDGAGMMAFPRRTIVMSTRDAFFAELLSVVEEERPAGVVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E +T + R F R+ R + V L E LS+ EA L E G + VD Sbjct: 62 LAGGEETLITRQVRNFVARLRRRSSLPVYLVAEELSSFEAGEDLREAGLSFREREAVVDQ 121 Query: 124 ASAVIILESYFE 135 +AV ILES+ Sbjct: 122 QAAVRILESFLN 133 >UniRef50_C0BJF8 Holliday junction resolvase YqgF n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BJF8_9BACT Length = 140 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G+L+ DFGTK G+A + A L + + P +++ + + D +VG P Sbjct: 2 GSLIGIDFGTKRTGLACTDPLKIIASGLKNLSTPEVIP---FLKKYCEMEEVDTFVVGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVE-VKLHDERLSTVEARSGLFEQGGYRALN--KG 119 L DGT + + F ++ +F + ++ +DER ++ A + G + KG Sbjct: 59 LQKDGTPAEVEVDIKNFIKKLQNQFPSQSIERYDERYTSKLAFQSMINGGLKKKQRADKG 118 Query: 120 KVDSASAVIILESYFE 135 +D SA +IL+SY + Sbjct: 119 MIDQVSATLILQSYLD 134 >UniRef50_Q6A8I7 Putative Holliday junction resolvase n=3 Tax=Propionibacterium acnes RepID=RUVX_PROAC Length = 160 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 3/137 (2%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G LA D+G IGVA R A P+ + D + ++ E++P E+I+G Sbjct: 11 LCGVRLAIDWGKARIGVAASDRDAILAFPVETVHTADRP--VQRLAEIVAEYEPVEVIMG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP+ ++GTEQ R ++ + V+ DER++T A L E G +G Sbjct: 69 LPVALNGTEQLAAQDVRDAGRQLTEAINPIPVRWVDERMTTRTAARALHEAGRNARKQRG 128 Query: 120 KVDSASAVIILESYFEQ 136 +D A+AV ILE EQ Sbjct: 129 VIDQAAAVAILEHVLEQ 145 >UniRef50_B0ML47 Putative uncharacterized protein n=4 Tax=Clostridiales RepID=B0ML47_9FIRM Length = 149 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 66/132 (50%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D+G G+A R A P+ I ++ + E++ E++VG P+ Sbjct: 2 KIMAVDYGDAHTGLACCDRTQTLASPIGVIDERNFQTCVEKVAAAAVEYEVGEVVVGNPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+GT P + + R FA+ + + V + DER +TV A + + + K +D+ Sbjct: 62 NMNGTYGPRSEKCRMFADMLQNFLEIPVVMWDERSTTVTAHNMMNDVNKRGKERKKVIDA 121 Query: 124 ASAVIILESYFE 135 +A +IL++Y + Sbjct: 122 VAAAVILQNYLD 133 >UniRef50_C6NYY4 Putative Holliday junction resolvase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NYY4_9GAMM Length = 148 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 68/132 (51%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 +G L D+G++ IG+A+ + RPL + G PDW +E++L +W P +VGL Sbjct: 10 TGPWLGIDYGSRRIGLAILAHLDIAPRPLGTVANGGGGPDWPALEKVLAQWAPVACVVGL 69 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 DGTE + AR FA + R+G+ + DERLS+V A L E + + + Sbjct: 70 TARADGTESAVARGARHFAAALSQRYGLPILWQDERLSSVTAAVRLREASPRKRRQRLAL 129 Query: 122 DSASAVIILESY 133 D +A IL + Sbjct: 130 DPLAACEILRGF 141 >UniRef50_B3DSE2 Putative Holliday junction resolvase n=8 Tax=Bifidobacteriaceae RepID=RUVX_BIFLD Length = 152 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 14/147 (9%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIK-AQDGTPDWNIIERLLKEWQPDEIIVGLP 62 L D G +G+A+ A P I A D + + ++++ D +IVGLP Sbjct: 2 VWLGVDLGNARVGLALSDPELTFAHPAGNIHVAGDYFFAIDEVLNVIEDEHVDHVIVGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGR------------FGVE-VKLHDERLSTVEARSGLFE 109 L MDGTE +AR++A + R + + V L DERL+TV A LFE Sbjct: 62 LQMDGTEGKSAKKARRWAANLEKRLQAESEDSDSTEYQIPQVSLIDERLTTVSAHRQLFE 121 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQ 136 ++ VD SAV+IL++ ++ Sbjct: 122 AHKASNKHRPVVDQQSAVVILQTALDR 148 >UniRef50_D0MGY5 Holliday junction resolvase YqgF n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGY5_RHOM4 Length = 145 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 6/140 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A D+GT+ +G+A+ + A+P +++RL E + +++G Sbjct: 1 MRPRVVAVDYGTRRVGLALADPLRVIAQPYGTYA---PEAALQVLQRLHAEEGIETLVIG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN-- 117 PL GTE T R +F R+ GV++ DER ++ A+ L E GG R Sbjct: 58 WPLTEAGTEGEATRRVERFIRRLRRLLPGVQIVRWDERYTSELAKERLREVGGPRKKRRD 117 Query: 118 KGKVDSASAVIILESYFEQG 137 KG++D +AVIIL+ Y EQ Sbjct: 118 KGRIDQMAAVIILQEYLEQQ 137 >UniRef50_Q6FF55 Putative Holliday junction resolvase n=18 Tax=Acinetobacter RepID=RUVX_ACIAD Length = 147 Score = 145 bits (368), Expect = 4e-34, Method: Composition-based stats. Identities = 55/129 (42%), Positives = 82/129 (63%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 ++AFDFGT+ +G+A+GQ ++ PL +DG PDWN + +++KEWQP +VGLPLN Sbjct: 10 IMAFDFGTQKMGIAIGQAAIESSTPLALFPMKDGIPDWNQLLKIVKEWQPTLFLVGLPLN 69 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 MD +E L+ARARKFA R+ + + + DERL+T EAR L K DS Sbjct: 70 MDDSESELSARARKFARRLRHQTNITTWMVDERLTTREARDELESYQEQGRAKKIAADSI 129 Query: 125 SAVIILESY 133 +A ++++S+ Sbjct: 130 AASLLIQSW 138 >UniRef50_C4G871 Putative uncharacterized protein n=1 Tax=Shuttleworthia satelles DSM 14600 RepID=C4G871_9FIRM Length = 147 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 45/134 (33%), Positives = 75/134 (55%), Gaps = 3/134 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD---WNIIERLLKEWQPDEIIVGL 61 ++A D+G K++GVA + TA+ + + + I+++ ++ + I+VGL Sbjct: 10 IMALDYGAKTVGVACTDSLGLTAQAVETVWRKRENKLRKTLARIDQIARDREIRLILVGL 69 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P+NMD +E AR FA+++ R G+ V+++DERLST+EA L + G K + Sbjct: 70 PVNMDDSEGERAGMARDFADQVAQRTGIAVEMYDERLSTIEADEILGKSGVPVGKRKRHL 129 Query: 122 DSASAVIILESYFE 135 D SA +ILE Y E Sbjct: 130 DELSAQLILERYLE 143 >UniRef50_C7GZF9 Putative Holliday junction resolvase n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZF9_9FIRM Length = 148 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 7/140 (5%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D G +IGVA + TA+ L +I + D I +L+E EI++G+PL Sbjct: 2 RVLALDVGEATIGVARSDALGITAQGLLSIFRESIKKDTTKIIDILREDDYSEIVIGMPL 61 Query: 64 NMDGT-EQPLTARARKFANRIHGRF------GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 N G + + KFA+++ + ++V+ +DER +T AR L + G Sbjct: 62 NTYGEAKNEQSIFTEKFADKLQNKLRSSGMSNIKVEFYDERFTTKMARDVLIQGGIKGKK 121 Query: 117 NKGKVDSASAVIILESYFEQ 136 K +D +AVI+L+SY ++ Sbjct: 122 QKDVIDKQAAVILLQSYLDK 141 >UniRef50_A1AV92 Holliday junction resolvase YqgF n=4 Tax=Bacteria RepID=A1AV92_RUTMC Length = 142 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAI-KAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L FD GTK G+A+ +T A + I ++G+ +W ++ ++ +VGLP Sbjct: 6 YLGFDVGTKRTGIAIANSLTMQATGIKVIKHHKNGSTNWVAFNEVISAHNINKFVVGLPF 65 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 N G EQ +T A+ F N++ R+ +EV+ DE LS+ EA+ L + + VD Sbjct: 66 NQQGKEQTMTFIAKSFGNKLKNRYQIEVEFIDEYLSSNEAKKLLKYNHHHHNAQRDDVDK 125 Query: 124 ASAVIILESYFEQ 136 S+ +IL+++ + Sbjct: 126 QSSQLILQTWLNE 138 >UniRef50_Q14MG2 Putative holliday junction resolvase yqgf protein n=1 Tax=Spiroplasma citri RepID=Q14MG2_SPICI Length = 139 Score = 144 bits (365), Expect = 8e-34, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 2/138 (1%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ LA D G+K++G+A Q + T + D + L+ Q +IIVG Sbjct: 1 MAKYYLAVDVGSKTLGLATSQGLIATGYGVYRFPENDFLQAAQYLAGLITTEQFSDIIVG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNK 118 P NM+ T P F N + + + L DERL+T +A + E R K Sbjct: 61 YPKNMNNTIGPRALMVSDFVNLLKQLLDPTITIHLVDERLTTHQAHQIMLEANLSRQKRK 120 Query: 119 GKVDSASAVIILESYFEQ 136 K DS +A +ILE+Y Q Sbjct: 121 QKKDSLAAQLILETYLHQ 138 >UniRef50_A5FWW0 Putative Holliday junction resolvase n=4 Tax=Acetobacteraceae RepID=RUVX_ACICJ Length = 158 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 66/134 (49%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + L+ D G+K IG+A+ A P A+K I + ++ +I+GL Sbjct: 16 NARLIGLDPGSKIIGIALSDVGRRLATPYGAMKRGKLAEAAATILDIARKEGAAALIIGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+MDG+ P AR +A+ I G+ V + DERLS+ L E RA G+V Sbjct: 76 PLSMDGSIGPAAQAARDWAHAIARETGLPVAMMDERLSSAAVNRALIEADVTRAKRAGRV 135 Query: 122 DSASAVIILESYFE 135 D+A+A +L+ + Sbjct: 136 DAAAASYMLQGALD 149 >UniRef50_B5YDY6 Putative Holliday junction resolvase n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=RUVX_DICT6 Length = 139 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 71/134 (52%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G K +G+A+ + A+ L + + + ++RL++++Q EI++G P+ Sbjct: 2 RVLAIDWGEKYVGLAISDPLRIIAQGLDVWEIKGEEDFVSRLKRLVEDYQVKEIVLGYPI 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 ++ G E T + R A I G+ VK DERL+T+EA L E R K + Sbjct: 62 SLRGHENERTQKVRHIAELIESVIGIPVKFVDERLTTMEAEKVLLEGDIKRKKRKLLKNK 121 Query: 124 ASAVIILESYFEQG 137 +AVIIL+ Y + Sbjct: 122 QAAVIILQKYLDSS 135 >UniRef50_Q0EX03 Holliday junction resolvase YqgF n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX03_9PROT Length = 168 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 1/134 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+A D G K IGVAV R + R + + +D + ++++E+ ++ GLP Sbjct: 28 PLIALDIGMKRIGVAVCDRFGISCRGVTCLMRRDHG-WPQQLAKVVREYGAKSVVAGLPK 86 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE A AR + + V DERLST A+ L+ QG + K+D Sbjct: 87 NMDGTEGVQAADARAAVAELKKTLPLPVTFQDERLSTWTAKERLYAQGLREKKVQEKLDQ 146 Query: 124 ASAVIILESYFEQG 137 +A +ILE + Sbjct: 147 TAAAVILEDFLASN 160 >UniRef50_B1XT83 Putative Holliday junction resolvase n=2 Tax=Polynucleobacter necessarius RepID=RUVX_POLNS Length = 147 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 8/133 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T +AFD+GT+ +GVAVG +T PL I A + + IE+LL EWQP++++VG P Sbjct: 12 TAMAFDYGTRRVGVAVGNSVTKAGEPLKTIAAPNSDTLFKDIEQLLAEWQPNQLVVGHPT 71 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG +TA+A +F N++HGRF + V DER ++ + E A + +D+ Sbjct: 72 HPDGAPHEMTAKAIRFGNQLHGRFQLPVAWVDERYTS-----AVLEGD---AQMRDNLDA 123 Query: 124 ASAVIILESYFEQ 136 SA +ILE YF + Sbjct: 124 HSATLILEQYFSE 136 >UniRef50_C2BWK5 Possible Holliday junction resolvase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWK5_9ACTO Length = 152 Score = 144 bits (364), Expect = 1e-33, Method: Composition-based stats. Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 1/136 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 ++G LA D G IGVA T A P+ ++ Q + + + ++ + P + VG Sbjct: 2 VAGNFLAIDVGKARIGVARSVSGTSLALPVKTLQVQPDGSELDELLAIITDSNPAAVFVG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP M G E AR +A R+ R G + V L DERLS+ +A + L + G K Sbjct: 62 LPKLMSGKEGEAARMARSYARRLVRRLGELPVHLIDERLSSADAHAKLQQAGVCARRQKE 121 Query: 120 KVDSASAVIILESYFE 135 VD +AV IL E Sbjct: 122 MVDQLAAVTILTRALE 137 >UniRef50_D1XWK4 RNAse YqgF n=3 Tax=Prevotella RepID=D1XWK4_9BACT Length = 139 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 7/138 (5%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G K G+AV + A L + + ++ + ++ D+I++G P Sbjct: 2 GRILAIDYGKKRTGIAVTDPLRIIANGLATVPTSE---LYDYLVAYIRSEAVDKIVIGKP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN---K 118 + +G R +FANR + ++ +DER ++V A + G + K Sbjct: 59 IQANGQPSENFVRVEQFANRWKKVQPTIPIEFYDERFTSVIAHQAMIVGGVKKKTRREDK 118 Query: 119 GKVDSASAVIILESYFEQ 136 G VD SA IIL+ + Sbjct: 119 GLVDEISATIILQDFMRS 136 >UniRef50_C4XJQ4 Putative holliday junction resolvase n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XJQ4_DESMR Length = 147 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 41/134 (30%), Positives = 60/134 (44%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G +G+AV + A P I + + + +++E P I++G P Sbjct: 3 KILAIDYGQARVGLAVCAPGSEIAFPHSTIAWETRDDLFARLLAVIEEQNPGRIVIGYPA 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E + R FA R+ R V + DE ST EA L E G KVD+ Sbjct: 63 RAGGDEGLTGRQVRNFAARLARRTAVPLAYADEAHSTEEAAERLREAGLSGRELLAKVDA 122 Query: 124 ASAVIILESYFEQG 137 +A +ILE Y G Sbjct: 123 MAAAVILERYLRGG 136 >UniRef50_Q8RFJ7 Putative Holliday junction resolvase n=19 Tax=Bacteria RepID=RUVX_FUSNN Length = 138 Score = 143 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 +A D G IGVA + A PL I + I + KE + ++VG+P Sbjct: 2 KRYIALDIGDVRIGVARSDIMGIIASPLETINRKKVKS-VKRIAEICKENDTNLVVVGIP 60 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA-LNKGK 120 ++DG E+ + R++ ++ +E+ DER STV A + L E A + Sbjct: 61 KSLDGEEKRQAEKVREYIEKLKKEIENLEIIEVDERFSTVIADNILKELNKNGAIEKRKV 120 Query: 121 VDSASAVIILESYFE 135 VD +A IIL++Y + Sbjct: 121 VDKVAASIILQTYLD 135 >UniRef50_D2L0Z6 Holliday junction resolvase YqgF n=1 Tax=Desulfovibrio sp. FW1012B RepID=D2L0Z6_9DELT Length = 152 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 56/134 (41%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G +G+AV A P + Q + + ++ I+VG P Sbjct: 3 KILAIDYGQARVGLAVSDPEGRMAFPFATVAWQTRDALFRELLDVITSQGIAAIVVGYPA 62 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 G E + RKF R+ R + + L DE ST EA L E G +VD+ Sbjct: 63 RAGGDESLTGRQVRKFVARLSRRTDLPIVLVDEAHSTEEAAEQLREAGLSGPALSARVDA 122 Query: 124 ASAVIILESYFEQG 137 +A +IL Y G Sbjct: 123 QAAAVILTRYLRGG 136 >UniRef50_D1PJI5 Putative Holliday junction resolvase n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PJI5_9FIRM Length = 156 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPA-IKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 LA D+G G+A P+ I+ + + ++ + + I+ GLP Sbjct: 2 KWLAVDYGDARTGLAGCDASETITSPITPQIEEKSMNKVAAAVTQVAVQRGAEGIVCGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NMDGTE A++R+FA R+ G V L DER +TV A + L + + K ++D Sbjct: 62 KNMDGTEGSRAAKSRRFAQRLANTAGRPVVLWDERRTTVSATAILADNDTFGQKRKARLD 121 Query: 123 SASAVIILESYFE 135 S SA +ILES+ Sbjct: 122 SVSAAVILESFLN 134 >UniRef50_C7I5C0 Holliday junction resolvase YqgF n=1 Tax=Thiomonas intermedia K12 RepID=C7I5C0_THIIN Length = 137 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 52/133 (39%), Positives = 78/133 (58%), Gaps = 10/133 (7%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T+L FD+G K IG AVG +T +A L +++A ++ I L++EWQP +++VGLPL Sbjct: 14 TVLGFDWGAKRIGTAVGNSLTRSATALRSLRADRNDLKFDAIAALIREWQPQQLVVGLPL 73 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 + DG TA A++FA ++ GRF + V L DER ++V A VDS Sbjct: 74 HPDGAAHDNTAHAQRFARQLEGRFRLPVALVDERYTSVAAED----------DGAKDVDS 123 Query: 124 ASAVIILESYFEQ 136 A+A +I+E Y +Q Sbjct: 124 AAAQLIVEQYLQQ 136 >UniRef50_A7BCJ6 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BCJ6_9ACTO Length = 162 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G + D GT +GV+ P+ + D + + +++ + E+IVGL Sbjct: 5 RGIRIGVDVGTVRVGVSRCDPDGILTMPVETLHRAPDLSDLDRLADIVRSYDAIEVIVGL 64 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P ++ G E ARK+A R+ V V + DER+++ +A + L G ++ Sbjct: 65 PRHLRGGEGISAKGARKYARRLKKLVPDVRVAMVDERMTSNQAHARLRASGIPEIEHRSV 124 Query: 121 VDSASAVIILESYFE 135 +D +A IILE E Sbjct: 125 IDQVAAQIILEQALE 139 >UniRef50_B0U3C1 Putative Holliday junction resolvase n=18 Tax=Xanthomonadaceae RepID=RUVX_XYLFM Length = 155 Score = 141 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +L FD GT+ IGVAVG AR + I DWN ++R+ + W P ++VG P Sbjct: 11 GIVLGFDVGTRRIGVAVGSAWGAGARAVAVIDVHGVAVDWNALDRVKRNWLPVGLVVGDP 70 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL---FEQGGYRALNKG 119 L ++G +QP+ +A FA ++ R+ + V L DER S+VEA S G R + Sbjct: 71 LTLEGHDQPIRKQAHAFACQLRERYRLPVVLVDERSSSVEAASRFAGARAAGYKRRRDAD 130 Query: 120 KVDSASAVIILESYF 134 +D+ +A +ILE + Sbjct: 131 TLDAIAAAVILERWL 145 >UniRef50_C1A648 Putative Holliday junction resolvase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A648_GEMAT Length = 168 Score = 141 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 46/136 (33%), Positives = 64/136 (47%), Gaps = 1/136 (0%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT-PDWNIIERLLKEWQPDEIIVGL 61 G LLA D+G K IG+AV + A P I + G P I R + I GL Sbjct: 6 GRLLAVDWGDKRIGLAVSDELGMLASPAGVIARRAGKRPPIAEIMRQAEALGVSGYIFGL 65 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL+ G E + R+ A ++ R + V+L DER +T A + EQGG KG V Sbjct: 66 PLDPGGDETDRSREVREVAGKLATRQPLPVRLVDERFTTSAALRSIREQGGSTRGRKGDV 125 Query: 122 DSASAVIILESYFEQG 137 D+ +A ++LE Sbjct: 126 DALAACVLLEGVLRAS 141 >UniRef50_C3PGN1 Putative Holliday junction resolvase n=17 Tax=Actinomycetales RepID=RUVX_CORA7 Length = 182 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 13/149 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-----TPDWNIIERLLKEWQPDEI 57 G L D GT IGVAV R A P+ ++ + G D + + L+ E+ E+ Sbjct: 16 GRRLGLDVGTVRIGVAVSDRDARLAMPVETVRRETGFKDRDKDDIDRLLDLIHEYDAVEV 75 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFGV--------EVKLHDERLSTVEARSGLFE 109 VGLP ++ G A++ A RI R V++ DERL+TV A S L Sbjct: 76 AVGLPRDLKGNGSSSVKHAKEIAFRIRRRLAKDDRMKEPPPVRMVDERLTTVVATSALRA 135 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQGY 138 G + +D A+AV IL+S+ + + Sbjct: 136 SGVSEKRGRSVIDQAAAVEILQSWLDARH 164 >UniRef50_B9ZKC4 Holliday junction resolvase YqgF n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZKC4_9GAMM Length = 130 Score = 141 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 72/133 (54%), Gaps = 6/133 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 LLAFD+G + IG+AVG+ +TG AR L + D W +I+RL+ EW P+ +VG P Sbjct: 3 LLAFDYGRRRIGIAVGEELTGAARGLRTL-NTDSPELWPVIDRLVSEWAPEGFVVGWPTQ 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG PL R R F + R+ V +DE L++ AR R + +D+ Sbjct: 62 ADGKPTPLAKRIRAFGAALEARYNQPVYWYDEHLTSHLARER-----SGRGRHDPGLDAH 116 Query: 125 SAVIILESYFEQG 137 +A +ILE +F++ Sbjct: 117 AAAVILEGWFQEN 129 >UniRef50_B0T191 Putative Holliday junction resolvase n=41 Tax=Alphaproteobacteria RepID=RUVX_CAUSK Length = 164 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 2/135 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D G K+IGVAV A PL IK + D + +L+ + I++GLP+ Sbjct: 18 PIVGLDPGEKTIGVAVSDVTLTVASPLALIKKTKFSEDAATLFQLMGSRKAAGIVIGLPM 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQ-GGYRALNKGKV 121 NMDGTE R + + + DERLST L E+ R V Sbjct: 78 NMDGTEGVRCQSNRALGRNLLRLQPHIPITFWDERLSTAAVTRVLIEEHDVNRKRRAEVV 137 Query: 122 DSASAVIILESYFEQ 136 D +A IL+ E+ Sbjct: 138 DKMAAAWILQGALER 152 >UniRef50_Q21YP1 Putative Holliday junction resolvase n=15 Tax=Burkholderiales RepID=RUVX_RHOFD Length = 156 Score = 141 bits (357), Expect = 7e-33, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 70/134 (52%), Gaps = 11/134 (8%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 T LA DFG K G AVG R+ TA+P I A +G + I LKEWQPD ++VG+P Sbjct: 33 QTFLALDFGLKRTGFAVGNRLLRTAQPQGTIAA-EGDARFVKIALQLKEWQPDALVVGVP 91 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + DG T RAR+FA ++ GRF + V DER +T EA R D Sbjct: 92 FHPDGAAHENTLRARRFARQLQGRFKLPVFEVDERYTTTEA--------LGRGARDA--D 141 Query: 123 SASAVIILESYFEQ 136 + +A IILE + Sbjct: 142 AMAACIILEQFLRS 155 >UniRef50_B2GIA0 Putative Holliday junction resolvase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GIA0_KOCRD Length = 165 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 8/145 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP---DWNIIERLLKEWQPDEI 57 + G + D GT +G+A+ A P + D II +L ++ + Sbjct: 6 VRGVRMGVDVGTVRVGIALTDPDCVLATPHQTLTRDPNPRKAFDVKIITKLCEQRDVRTV 65 Query: 58 IVGLPLNMDGTEQPLTARARKFANRIHGRFG-----VEVKLHDERLSTVEARSGLFEQGG 112 VGLP +++G E T AR +A + R G EV+L DERLSTV A L + G Sbjct: 66 YVGLPRSLNGHENDSTRMARDYAAGLLRRLGSRGCTTEVRLVDERLSTVTAHRSLLDSGV 125 Query: 113 YRALNKGKVDSASAVIILESYFEQG 137 R + +VD A+AV L++ +QG Sbjct: 126 SRREHMDRVDQAAAVTFLQTAVDQG 150 >UniRef50_Q4FLQ5 Putative Holliday junction resolvase n=3 Tax=Candidatus Pelagibacter RepID=RUVX_PELUB Length = 151 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 35/132 (26%), Positives = 56/132 (42%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D G+K IGV++ A P I + + ++ ++K+ IIVG P+ Sbjct: 16 RFIGLDLGSKRIGVSICDERQSIATPFKTINKTNTNELIDELKIIIKDNNIGGIIVGNPV 75 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDG+ A+ I + V L DERLSTV A + + +D Sbjct: 76 NMDGSLGRSAQSVNDVASNISKSIDLPVILWDERLSTVGAFNLSSLLDVNVSKRVKTIDQ 135 Query: 124 ASAVIILESYFE 135 +A IL+ + Sbjct: 136 NAAAFILQGAID 147 >UniRef50_B6BUR1 Putative uncharacterized protein n=1 Tax=beta proteobacterium KB13 RepID=B6BUR1_9PROT Length = 161 Score = 141 bits (356), Expect = 9e-33, Method: Composition-based stats. Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G++LAFD G K GVAVG + T+R L +++ I++L+ EWQP +++GL Sbjct: 16 KGSVLAFDLGIKKTGVAVGNNVLKTSRNLVTFYSKNKNQRIEKIKQLVNEWQPIYLVLGL 75 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK-GK 120 P N D + T A I + + +E S+ A + + G + N Sbjct: 76 PSNRDSSANETTKFCLNTAKEIEKNINLPIFFVNENYSSTSAEELIKDLGNKKQKNNISL 135 Query: 121 VDSASAVIILESYFEQ 136 VD +A IIL+S+F + Sbjct: 136 VDQIAADIILQSHFNE 151 >UniRef50_Q1VUW8 Holliday junction resolvase-like protein n=2 Tax=Bacteroidetes RepID=Q1VUW8_9FLAO Length = 137 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 6/138 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M ++A DFG K G+A+ + A L ++ ++ ++++++E D ++VG Sbjct: 1 MKTKVIALDFGMKRTGIAISDEMKMIASGLRTVETRN---LMQELKKIIEEESVDTLVVG 57 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN-- 117 P ++DG L F + F + +K DER ++ A + + G + Sbjct: 58 QPKHIDGKPMQLEKNILYFIEDVQALFPSLVIKRIDERFTSKMAFQTMIDSGLKKKQRQN 117 Query: 118 KGKVDSASAVIILESYFE 135 KG VD SA IIL++Y + Sbjct: 118 KGLVDEISATIILQNYLQ 135 >UniRef50_B4S5W7 Putative Holliday junction resolvase n=3 Tax=Chlorobiaceae RepID=RUVX_PROA2 Length = 142 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 69/140 (49%), Gaps = 6/140 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 ++A D+GTK IG+A + A+P+ + I+ + I++G Sbjct: 6 RKRIIAVDYGTKRIGLAKTDPLQLFAQPVGTF---SEEALFRAIKEISGLDGIGRILIGY 62 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--K 118 PLN DG+ +T FA R+H F + ++L +E S+ A L G R K Sbjct: 63 PLNADGSHNRMTDIVDAFAARVHNEFPDIPLELVNEHGSSRSAGQILINSGLSRKKRHEK 122 Query: 119 GKVDSASAVIILESYFEQGY 138 G++DSASA ++L+++ ++ + Sbjct: 123 GRLDSASACVLLQAHLDKSH 142 >UniRef50_Q73IL4 Putative Holliday junction resolvase n=7 Tax=Wolbachia RepID=RUVX_WOLPM Length = 155 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 60/134 (44%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++ D G K IG+A + A ++ + D + R+ KE + +++GLP Sbjct: 17 KRIMCLDMGEKQIGIAFSDKTQLIATAHSIYHRKNMSKDLGYLHRIFKENESGSMVIGLP 76 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L MD E +FAN+I ++ V + L DE ST A L G +K D Sbjct: 77 LKMDEQETKWCKTIIQFANKIIKKYKVNIYLQDESFSTSIATHTLKITGISITKSKKIDD 136 Query: 123 SASAVIILESYFEQ 136 SA IIL+ ++ Sbjct: 137 KISACIILQRTLDK 150 >UniRef50_D1AX73 Holliday junction resolvase YqgF n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AX73_STRM9 Length = 142 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 4/135 (2%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 L D G IGVA + A I + T + I+ ++ + +++GLP Sbjct: 4 YLGLDIGDVRIGVAKSDGLAMFASSYEVIDR-NITDPFERIKEIINSEKVIALVLGLPKT 62 Query: 65 MDGTEQPLTARARKFANRIHGRF--GVEVKLHDERLSTVEARSGLFE-QGGYRALNKGKV 121 DG + +F + + + + DER +T EA L + V Sbjct: 63 KDGQNSIQVEKIERFVSELKLFIPENLPIHYIDERYTTKEAEYYLKNFSKKNGKERRKVV 122 Query: 122 DSASAVIILESYFEQ 136 D +A IIL+++ ++ Sbjct: 123 DMVAAQIILQNFLDK 137 >UniRef50_Q14HM0 Putative Holliday junction resolvase n=18 Tax=Francisella RepID=RUVX_FRAT1 Length = 136 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 1/137 (0%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L+A D+G IG++ GQ IT TA P+ ++A DG P+W +++++K W P +II+G Sbjct: 1 MFQSLIAIDYGKARIGISSGQMITKTATPIGTVEAYDGVPNWIELDKIIKCWNPSDIIIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LPL+ E +T A+ FA + R+ +V L +E ST EAR L E + ++ K Sbjct: 61 LPLDTQNFETDITKSAKDFAKEVQQRYQRKVHLINEAYSTREARWRLEEV-KSKKVSHIK 119 Query: 121 VDSASAVIILESYFEQG 137 VD+ +A +ILE++ + Sbjct: 120 VDALAACVILETWMSEN 136 >UniRef50_B8H9B9 Holliday junction resolvase YqgF n=3 Tax=Arthrobacter RepID=B8H9B9_ARTCA Length = 207 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 6/141 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D GT +GVA+ R + A P + D +I +L +E ++IVG+ Sbjct: 22 GVKLGVDVGTVRVGVAICDRDSILATPYKTLDRNTKKNSDVRLIAKLAEELGAVQVIVGM 81 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRAL 116 P M G E A +A + V V + DERLS+V A L E G Sbjct: 82 PRTMKGEEHASARMASDYAGLLAAELAARGLDVPVNMVDERLSSVSAHRNLHEAGMSSRN 141 Query: 117 NKGKVDSASAVIILESYFEQG 137 ++ VD +A IL+ + Sbjct: 142 HRKVVDQVAAAGILQHAIDMQ 162 >UniRef50_C1ZC39 Putative uncharacterized protein n=1 Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZC39_PLALI Length = 199 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 29/161 (18%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G LL D+G K +G+A+ A P+ + + + D + +++ ++VGLP Sbjct: 27 GCLLGVDYGQKRVGLAISTFEQTLAMPMEIYQRKSESVDREWFKATCLDYRVAGLVVGLP 86 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGG---------- 112 L+ G E L+ R+F + + ++ DER ++V A +++ G Sbjct: 87 LHTSGEESELSREVRQFGEWLARCTNLPLRFWDERYTSVSAELLMWQDGVFPRSGNKPAS 146 Query: 113 ----------------YRALNK---GKVDSASAVIILESYF 134 RA K VD +A +IL ++ Sbjct: 147 GRTSKKSPGAGHSSPQNRAKKKTPVSPVDKLAAHMILTAFL 187 >UniRef50_Q2B0A4 Holliday junction resolvase-like protein n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2B0A4_9BACI Length = 111 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 56/104 (53%) Query: 33 IKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVK 92 I ++ ++ + +++KE+ I+VGLP NM+GT P ++ FA + FG+ V Sbjct: 6 ISEEEKEFGFDQLGKIIKEYDVSTIVVGLPKNMNGTIGPRGEASQFFAGELERLFGLPVV 65 Query: 93 LHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 L DERL+T+ A L E R K +D +A +IL+ Y + Sbjct: 66 LWDERLTTMAAERVLLEADVSRKKRKKVIDKMAASMILQGYLDS 109 >UniRef50_A8TLD1 Holliday junction resolvase YqgF n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLD1_9PROT Length = 168 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 40/121 (33%), Positives = 54/121 (44%), Gaps = 1/121 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L+ DFGTK+IG+AV A P+ I+ + + D I L+ +VGLPL Sbjct: 18 RLMGLDFGTKTIGIAVSDAALRVASPVTIIRRRKFSEDAAEILALVGSRNIGGFVVGLPL 77 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNKGKVD 122 NMDGTE P R + R + DER+ST + E R K +D Sbjct: 78 NMDGTEGPRCQSTRDLTAELLLRHDLPTVFQDERMSTQAVERAMISEADLTRGQRKKSID 137 Query: 123 S 123 S Sbjct: 138 S 138 >UniRef50_A4XKC6 Putative Holliday junction resolvase n=2 Tax=Clostridia RepID=RUVX_CALS8 Length = 138 Score = 139 bits (352), Expect = 3e-32, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 5/135 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D G++ IGVA+ + A+P + Q ++ ++++ E Q ++I++G P+ Sbjct: 2 RILCLDIGSRRIGVAISDPLKIAAQPFCVLDLQKED-LYSCLDKIFNEHQIEKIVIGYPV 60 Query: 64 ---NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 + D + + + + R+ V + DER ST L E+ K Sbjct: 61 SKFHPD-KATEKLQKIDEICSELERRYKVGIIKWDERFSTKAVERILREENVSWQKRKKV 119 Query: 121 VDSASAVIILESYFE 135 VD +AV IL+ Y + Sbjct: 120 VDKLAAVYILQGYLD 134 >UniRef50_B6YQC7 Putative Holliday junction resolvase n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=RUVX_AZOPC Length = 138 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K G A+ + + ++ ++ + + + ++G P Sbjct: 2 GRIVAIDYGEKRTGFAISDPLKMIVSSFVTVLSRK---AVMYLKNCTENYDIELFVLGEP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 MD T R KF + ++V++ DER ++V A + E G + KG Sbjct: 59 RQMDYTPSENMPRVEKFKRNLRRVIPSIDVQMVDERFTSVLAHRIMIEGGVKKIKRQDKG 118 Query: 120 KVDSASAVIILESYFE 135 VD SA I+L++Y E Sbjct: 119 LVDRLSAAILLQTYLE 134 >UniRef50_B5JG46 Putative uncharacterized protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JG46_9BACT Length = 149 Score = 138 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + D+G + +GVA G I A PL AI + L +E + + + G P Sbjct: 2 RCIGVDYGERRVGVAFGDDIGV-ATPLQAIVKATEEERIQALVDLARERRATDFVFGYPY 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NM+G+ F +++ + V DERL++VEA ++ GK+DS Sbjct: 61 NMNGSVGFKAKEVDAFIDKLLKAIDLPVHRLDERLTSVEASKAFPKKRDDELRRSGKIDS 120 Query: 124 ASAVIILESYFEQ 136 +A +IL+ Y Q Sbjct: 121 VAASLILQDYLNQ 133 >UniRef50_C7NHC7 Putative uncharacterized protein n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NHC7_KYTSD Length = 161 Score = 138 bits (350), Expect = 5e-32, Method: Composition-based stats. Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 7 AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLK-EWQPDEIIVGLPLNM 65 A D G +GVA G A P+ + G + + +L++ E + ++VGLP ++ Sbjct: 4 AVDVGLARVGVASGDPDGVLATPVETVAVAPGLTALDRVVQLVRQEERSTGVVVGLPRHL 63 Query: 66 DGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG E AR++A + R G V V L DERLSTV A G+ E G + ++D Sbjct: 64 DGHESTSAVEARRWATALASRLGPTVRVWLVDERLSTVAASRGMREAGVRAKEQRTRIDQ 123 Query: 124 ASAVIILESYFE 135 A+AV IL+ + Sbjct: 124 AAAVEILQMSLD 135 >UniRef50_C0YTW9 Holliday junction resolvase-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YTW9_9FLAO Length = 138 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G +LA D+G G+A + A L ++ + +++ E + DE+++GLP Sbjct: 2 GQILAIDYGKARCGIAATDDMQIIASGLETVENRS---LMEFLKKYFSENKVDEVVIGLP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 +++ G + KF F + V DER ++ A + + G + KG Sbjct: 59 IDLKGNISEVETDILKFIEEFKKEFSDIAVHRFDERFTSKMASFFISQSGKNKKKRQEKG 118 Query: 120 KVDSASAVIILESYFEQ 136 +D SA IIL+++ EQ Sbjct: 119 LIDKVSATIILQNFLEQ 135 >UniRef50_A9TLR6 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TLR6_PHYPA Length = 171 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 5/139 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT--PDWNIIERLLKEWQPDEIIVG 60 G LL D G+++IG+AV A P + + T + + +E L++E +++G Sbjct: 17 GRLLGLDVGSRNIGLAVSDPKCRIASPHSVMYRSNTTTLKNISRLESLVQEMNITGLVIG 76 Query: 61 LPLNMDGTEQPLTARARKFANRIH--GRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 PL + G + A+ + FA + GRF + DERL++V + + Sbjct: 77 YPLELTGFQGKQGAQVKLFAKELQMSGRFPNLAYVYWDERLTSVAVTNVIGSMDITGRRR 136 Query: 118 KGKVDSASAVIILESYFEQ 136 K VD SA+ IL+ + Sbjct: 137 KNIVDKMSALCILQGCLDS 155 >UniRef50_B8DIJ5 Putative Holliday junction resolvase n=3 Tax=Desulfovibrio RepID=RUVX_DESVM Length = 142 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 41/132 (31%), Positives = 60/132 (45%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+GTK GVA A P I + + + +E + + +VGLPL Sbjct: 2 KYLGIDYGTKRTGVAASDTGGSMAFPRRTIVMTTRDRFFAELLAVAEEERAEAYVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DGT+ T + R F R+ R + V L +E LS+ EA L + G + VD Sbjct: 62 LHDGTDTLTTRQVRNFVERLKRRTTLPVYLMEEFLSSYEAEDDLRDAGLSGRALEAVVDQ 121 Query: 124 ASAVIILESYFE 135 +AV IL+S+ Sbjct: 122 QAAVRILQSFLN 133 >UniRef50_Q605E9 Putative Holliday junction resolvase n=1 Tax=Methylococcus capsulatus RepID=RUVX_METCA Length = 151 Score = 138 bits (348), Expect = 8e-32, Method: Composition-based stats. Identities = 50/133 (37%), Positives = 80/133 (60%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 T L FDFG ++IGVAVGQ +TGTA PL ++AQ W I L+ +W P ++VGL Sbjct: 12 TYLGFDFGERNIGVAVGQSVTGTAAPLRTLRAQPSARLWAAISELIDQWLPAGLVVGLSH 71 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRA-LNKGKVD 122 DG+E P+TA +F ++ GR+ + V DE L+T E+R+ +++ ++ + D Sbjct: 72 QQDGSENPITAPTLRFCRQLEGRYRLPVYTVDETLTTAESRTHFYQRRRRKSVEFEQVKD 131 Query: 123 SASAVIILESYFE 135 +A +IL+++F Sbjct: 132 EMAAQLILQTWFS 144 >UniRef50_A8SI08 Putative uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SI08_9FIRM Length = 143 Score = 137 bits (347), Expect = 1e-31, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPA-IKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 +LA D+G G+A R + I + + + KE + + I++GLP Sbjct: 2 KILAVDYGDSRTGLATCDRTEFLTTAITPQITLKARNKVAARVCEVAKEIEAEMILIGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LNMDGTE A++RK A + G+ V++ DER +T A L E G Y + K +D Sbjct: 62 LNMDGTEGERAAKSRKLAKTVELWSGLPVRMWDERQTTCAAADLLDESGTYGSRRKEILD 121 Query: 123 SASAVIILESYF 134 S SA +ILE Y Sbjct: 122 SVSATVILEDYL 133 >UniRef50_B3ETT5 Putative Holliday junction resolvase n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=RUVX_AMOA5 Length = 141 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 6/137 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G ++A D+G K +G++V + A PL + A D ++ +K+ + +VG P Sbjct: 2 GRIMAIDYGLKRVGLSVTDPLQIIASPLTTVAANDT---LTFLQTYVKKENVEAFVVGYP 58 Query: 63 LNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALN--KG 119 ++ P+ +F + F ++ HDER ++ A + L E G + K Sbjct: 59 TDIKDKNTPIIVAISQFIELLQRNFPDQQIFQHDERYTSKLAAASLVEGGFKKKDRRNKE 118 Query: 120 KVDSASAVIILESYFEQ 136 +D SA IIL+S+ Sbjct: 119 NLDKLSATIILQSFLSS 135 >UniRef50_A9WSC3 Putative uncharacterized protein n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WSC3_RENSM Length = 169 Score = 136 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 6/140 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G L D GT +GVAV A PL A++ D II + E I VG Sbjct: 9 RGVRLGVDVGTVRVGVAVCDPDGILATPLRAVQRDAKRNSDLRIIVKEALERDAITIYVG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-----GVEVKLHDERLSTVEARSGLFEQGGYRA 115 LP + GTE AR A ++ EV+L DERLS+V A L G Sbjct: 69 LPQTLRGTESGSAELARAIAGQLADLLVQSDSAAEVRLIDERLSSVSAHQQLRSAGMAGR 128 Query: 116 LNKGKVDSASAVIILESYFE 135 + +D +A IL+ E Sbjct: 129 EQRKVIDQVAAAGILQHALE 148 >UniRef50_D2NT33 Predicted endonuclease involved in recombination n=2 Tax=Rothia mucilaginosa RepID=D2NT33_9MICC Length = 187 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 7/141 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G + D G +G A+ A PL ++ D ++ +L++ + E+ VG Sbjct: 6 RGVRMGVDVGNARVGTALSDPDGILATPLKTLRRDAKKNSDRRVLRKLIEVNEVVEVFVG 65 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG------VEVKLHDERLSTVEARSGLFEQGGYR 114 LP M G + P T AR++A + + + L DERL+TV A L E G Sbjct: 66 LPKTMRGGDSPSTEMAREYAQALRSELDAEEKTHINIWLVDERLTTVSAHRALHEAGVSS 125 Query: 115 ALNKGKVDSASAVIILESYFE 135 K VD +AV IL+ + Sbjct: 126 RDFKTMVDQVAAVNILQYSLD 146 >UniRef50_A1KLQ2 Putative Holliday junction resolvase n=21 Tax=Actinomycetales RepID=RUVX_MYCBP Length = 170 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G IGVA A P+ ++ + L E + E+IVGL Sbjct: 21 RGRRLGIDVGAARIGVACSDPDAILATPVETVRRDRSGKHLRRLAALAAELEAVEVIVGL 80 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P + A + A + R V+L DERL+TV A+ L + G + + Sbjct: 81 PRTLADRIGRSAQDAIELAEALARRVSPTPVRLADERLTTVSAQRSLRQAGVRASEQRAV 140 Query: 121 VDSASAVIILESYFEQ 136 +D A+AV IL+S+ ++ Sbjct: 141 IDQAAAVAILQSWLDE 156 >UniRef50_B1MCF8 Putative Holliday junction resolvase n=7 Tax=Actinomycetales RepID=RUVX_MYCA9 Length = 166 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 2/137 (1%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVG 60 G L D GT IG++ A P+ + D+ I L++E E++VG Sbjct: 19 RGRRLGVDVGTVRIGISSSDPDGILATPVETVSRDAKEDSDFRRIAELVEEMSVVEVVVG 78 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 LP N+ A FA + R V V+L DER +T A+ L E G +G Sbjct: 79 LPRNLREGTGSSARDAAGFARELGERIAPVPVRLVDERFTTTTAQRSLREAGVRSRQQRG 138 Query: 120 KVDSASAVIILESYFEQ 136 +D A+AV IL+ + EQ Sbjct: 139 IIDQAAAVAILQDWLEQ 155 >UniRef50_A1A199 Putative Holliday junction resolvase n=12 Tax=Bifidobacterium RepID=RUVX_BIFAA Length = 151 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 14/148 (9%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVGLP 62 L D G +G+A+ A P+ I+ D + + ++ + D +++GLP Sbjct: 2 VWLGIDLGDARVGLALSDPELTLAHPIGNIQVYGDSFRALDEVIDVIGDESVDHVVIGLP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFG------------VE-VKLHDERLSTVEARSGLFE 109 L ++G E +AR+++ + R V ++L DERL+TV A LF+ Sbjct: 62 LLLNGEEGKSAKKARRWSVNLEKRLHAAVEDESYSVTRVPTIELVDERLTTVTAHHQLFD 121 Query: 110 QGGYRALNKGKVDSASAVIILESYFEQG 137 ++ VD SAV+IL++ ++ Sbjct: 122 ARIGGRKHRPMVDQQSAVVILQTALDRS 149 >UniRef50_Q2NJ58 Putative Holliday junction resolvase n=7 Tax=Acholeplasmataceae RepID=RUVX_AYWBP Length = 151 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 4/133 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAI--KAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D G K++G+A+ Q A+ L I +++++ ++Q +II+G P Sbjct: 10 LGLDLGEKTLGIALSQT-GIIAQNLKTIFFDTHKYDQLIAPLQKIISQYQIKKIILGYPK 68 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +M+ + F + +FG V+V L DERLSTV+A L + D Sbjct: 69 HMNNDIGIKAKISNYFKKTLENKFGQVKVILWDERLSTVQAIQILKTNNKKKGKILQMKD 128 Query: 123 SASAVIILESYFE 135 +A IIL++Y + Sbjct: 129 EIAASIILQNYLD 141 >UniRef50_Q4FVM8 Putative Holliday junction resolvase n=3 Tax=Psychrobacter RepID=RUVX_PSYA2 Length = 177 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G K +G+A+G +T TAR + +G PDW+ + ++K W +++VGLPLN Sbjct: 29 ILALDYGVKKMGMALGNSLTETARAFDILAMNNGQPDWDNLLGIIKVWGVAKVVVGLPLN 88 Query: 65 MDGTEQPLTARARKFANRIHGRF---GVEVK--LHDERLSTVEARSGLFEQGGYRALNKG 119 MDG+ L+ RA KFA R+ R + V L DERL++V AR +E G + Sbjct: 89 MDGSSSMLSKRAHKFARRLAHRIMEQHLPVIVSLCDERLTSVAAREIAWENGWIQNER-D 147 Query: 120 KVDSASAVIILESYF 134 +D SA I++ +YF Sbjct: 148 PIDDISACILMSTYF 162 >UniRef50_A5IYK4 Putative Holliday junction resolvase n=2 Tax=Mycoplasma RepID=RUVX_MYCAP Length = 146 Score = 135 bits (341), Expect = 5e-31, Method: Composition-based stats. Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 5/139 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIK--AQDGTPDWNIIERLLKEWQ--PDEIIV 59 L+FD GTK+ G A+ + +A L I+ D ++ ++K +Q D ++ Sbjct: 2 RKLSFDLGTKTCGFAISDILEISANALETIRFVENDFNAVIVKVKEIIKMYQNSIDAFVL 61 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 G PL +G++ T FA + F G+ + L DE ST++A+ L + K Sbjct: 62 GYPLRSNGSKSERTMMVDNFAILLANEFPGINIYLVDEYGSTIKAQRILKDAKLSNKKTK 121 Query: 119 GKVDSASAVIILESYFEQG 137 K D+ SAVIIL + + G Sbjct: 122 SKKDTVSAVIILNDFLQYG 140 >UniRef50_C1Q9W8 Putative uncharacterized protein n=1 Tax=Brachyspira murdochii DSM 12563 RepID=C1Q9W8_9SPIR Length = 141 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A PL I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGVDFGRKKTGTAFMDMNIKIPFPLLLIEESNAKKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E + R+F++ + V V DE ++ EA L G + + K D Sbjct: 62 DEGKESEWCSEIRRFSDFLLKSVKVNVVFVDEYGTSKEADYILR--GRKKNVKKKANDLI 119 Query: 125 SAVIILESYFE 135 +A +ILE+Y Sbjct: 120 AAALILENYLN 130 >UniRef50_Q6KHK6 Putative Holliday junction resolvase n=1 Tax=Mycoplasma mobile RepID=RUVX_MYCMO Length = 144 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 4/137 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD--GTPDWNIIERLLKEWQPDEIIVGL 61 L D G G A+ + PL ++ I+++L E+Q D I++GL Sbjct: 2 RKLGIDLGKIRTGFAISDDSNKISLPLKTFIQKNANFNNIILEIKKILLEYQIDTIVIGL 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P+ ++ + T F + + + +E S+V A + E K V Sbjct: 62 PIKINNEKTKSTIFVENFKKHLEKEINLPIFFVNEYNSSVLANLSINEM--KSKKRKTIV 119 Query: 122 DSASAVIILESYFEQGY 138 D SA IIL + + Sbjct: 120 DKISAQIILNDFLNNYF 136 >UniRef50_B8ZUJ7 Putative Holliday junction resolvase n=16 Tax=Actinomycetales RepID=RUVX_MYCLB Length = 184 Score = 134 bits (339), Expect = 8e-31, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 1/136 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G+ IGVA A P+ ++ + L+ E Q E++VGL Sbjct: 25 RGRRLGIDVGSVRIGVAFSDPDGILATPVETVRRYRSAKHLRRLAELVVELQVVEVVVGL 84 Query: 62 PLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 P + A A + R V V+L DERL+TV A+ L G + Sbjct: 85 PWTLTDRTGSSAKDAIDTAEALARRVAPVPVRLVDERLTTVSAQRLLRAAGVRAKDQRAV 144 Query: 121 VDSASAVIILESYFEQ 136 +D A+AV+IL+++ +Q Sbjct: 145 IDQAAAVVILQNWLDQ 160 >UniRef50_C4KC98 Holliday junction resolvase YqgF n=2 Tax=Betaproteobacteria RepID=C4KC98_THASP Length = 168 Score = 134 bits (339), Expect = 9e-31, Method: Composition-based stats. Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 GT+L FDFG IGVA G+ TG A L + A+ + I RL+ EW+P ++VG+ Sbjct: 27 RGTVLGFDFGLARIGVASGELETGLASALTTVHAEANDARFAAIARLIAEWRPVALVVGI 86 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY-RALNKGK 120 P ++DG E LTAR R+FAN++HGR + V DERLS+V A + L E G K Sbjct: 87 PTHLDGREHELTARCRRFANQLHGRHALPVFTADERLSSVAAEAELAEAGRKDWRERKAA 146 Query: 121 VDSASAVIILESYFE 135 +D+A+A I+L+++ + Sbjct: 147 LDAAAARILLQTFLD 161 >UniRef50_A4A9D9 Holliday junction resolvase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9D9_9GAMM Length = 121 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 52/119 (43%), Positives = 73/119 (61%) Query: 18 AVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARAR 77 AVG GT +PL ++A+DG PDW + L KEW+PD +++G PLNMDGT RAR Sbjct: 2 AVGNSALGTTQPLAILRARDGQPDWTQVAALCKEWEPDLLLIGDPLNMDGTVSDFAQRAR 61 Query: 78 KFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 KFA R+ GR G+ V++ DERLS+ E + E G ++ VD +A +IL+ + Q Sbjct: 62 KFARRLEGRLGIAVEMVDERLSSFEVKQQQREAGHSGDYHESPVDDLAAELILKDWLRQ 120 >UniRef50_Q2SSR1 Putative Holliday junction resolvase n=4 Tax=Mollicutes RepID=RUVX_MYCCT Length = 143 Score = 133 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 8/142 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPD--WNIIERLLKEWQPDEII 58 M+ +++AFD G+K+IG+A A L I+ ++ D +E LK++ P I+ Sbjct: 1 MTQSIIAFDIGSKTIGLAYS--SGVIASSLDTIRFEEYNFDQGLKQLELYLKKYNPSIIV 58 Query: 59 VGLPLNMDGTEQPLTARA----RKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYR 114 VG P NM+ T F + ++ DER +T A++ L + R Sbjct: 59 VGYPKNMNNTIGERAEMVDYVIEMFLDMYKSFNKDQIIKVDERRTTKIAKNILIQANLTR 118 Query: 115 ALNKGKVDSASAVIILESYFEQ 136 K DS +A +ILE Y E Sbjct: 119 EKQKKYKDSLAAQLILELYLES 140 >UniRef50_C8N6Z7 Holliday junction resolvase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6Z7_9GAMM Length = 134 Score = 133 bits (336), Expect = 2e-30, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 66/130 (50%), Gaps = 8/130 (6%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D G + GVAVGQ +T TA+PL ++ + ++EW I++GLP Sbjct: 6 ILALDVGQRKTGVAVGQSLTQTAKPLAVLRHPAQQLEAAHFAAWVREWSVSHIVIGLPKL 65 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 DG E PL A R+ + FG+ V DE LS+ EAR+ L + +VD+ Sbjct: 66 RDGKEHPLAAPIRRIGAKCQEAFGLPVHYIDEYLSSHEARARLPGE--------KEVDAM 117 Query: 125 SAVIILESYF 134 +A II E + Sbjct: 118 AAAIIAEDWL 127 >UniRef50_C2KQ01 Possible Holliday junction resolvase n=2 Tax=Mobiluncus mulieris RepID=C2KQ01_9ACTO Length = 145 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 1/130 (0%) Query: 9 DFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGT 68 D G +G+A T A P+ +K Q + + ++E + VGLP ++G Sbjct: 2 DVGKVRVGIAQAYLDTILALPVKTLKVQADGSELEELASFIREETTTAVFVGLPRLLNGK 61 Query: 69 EQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAV 127 E AR +A R+ + + V+L DERLS+V A L G +K VD +A Sbjct: 62 EGEAARMARSYARRLARKISPIPVRLIDERLSSVTAHEKLRAAGVSTREHKKMVDQVAAQ 121 Query: 128 IILESYFEQG 137 ILE E Sbjct: 122 QILEQAIEMS 131 >UniRef50_C7R4E9 Holliday junction resolvase YqgF n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4E9_JONDD Length = 167 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 14/148 (9%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTP-------------DWNIIERL 48 G L D G +GVA T A P+ + D + + Sbjct: 6 RGVRLGVDVGQVRVGVAACDPDTILATPVETLARDRSVSYVAGGKVPSVLPTDIEDLREI 65 Query: 49 LKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGL 107 +E + VGLP ++ G A +A+ + +EV+L DERL++ A S L Sbjct: 66 AEERLAVAVYVGLPKHLSGARGVSAEMAVNYASLVQRVLPHLEVRLVDERLTSKTAHSAL 125 Query: 108 FEQGGYRALNKGKVDSASAVIILESYFE 135 + G ++ +D A+AV+IL++ E Sbjct: 126 HDAGRRAREHRTVIDQAAAVVILDTALE 153 >UniRef50_D1BSM1 Holliday junction resolvase YqgF n=3 Tax=Micrococcineae RepID=D1BSM1_XYLCX Length = 184 Score = 131 bits (331), Expect = 7e-30, Method: Composition-based stats. Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 6/140 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-----QDGTPDWNIIERLLKEWQPDE 56 G L D G IG+A A P+ + + D I + E Sbjct: 28 RGARLGVDVGKARIGLAASDPDGLIATPVETVARVLDATGTDSADVRAIAEAVGERFAAV 87 Query: 57 IIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRA 115 + VGLP ++ G E TA AR FA R+ V V++ DER+STV A S L G Sbjct: 88 VYVGLPRHLSGKEGAATADARAFATRLALAVAPVPVRMVDERMSTVTATSQLRAAGKKSK 147 Query: 116 LNKGKVDSASAVIILESYFE 135 ++ +D A+AVIIL+S + Sbjct: 148 SHRPVIDQAAAVIILQSALD 167 >UniRef50_B8LQC7 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LQC7_PICSI Length = 178 Score = 131 bits (330), Expect = 8e-30, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 5/140 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ--DGTPDWNIIERLLKEWQPDEIIV 59 +G LL D G + +G+AV + A P + + + + ++ L++ + ++ Sbjct: 21 TGRLLGMDVGDRYVGLAVSNHLNEIASPHSVLIRKQSNIDSITDKLQELVRRFSLVGFVI 80 Query: 60 GLPLNMDGTEQPLTARARKFANRIHG--RFG-VEVKLHDERLSTVEARSGLFEQGGYRAL 116 G PL + ++ + + F ++ RFG + DERL+T S L + Sbjct: 81 GYPLPLYHFQRSQAMQVKMFVEQLQKTGRFGCLNYTYWDERLTTRAVESMLKPLKIHPLQ 140 Query: 117 NKGKVDSASAVIILESYFEQ 136 K +D +AV IL+ + + Sbjct: 141 MKHMMDKFAAVGILQDFLDN 160 >UniRef50_D1H5Y4 Whole genome shotgun sequence of line PN40024, scaffold_21.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1H5Y4_VITVI Length = 679 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G G+A+ + RPL +K + + + + + DE I+GLP Sbjct: 510 GFSLGVDLGMSRTGLALS--KGFSVRPLSVLKLRGQKLELQ-LLEIAGREEVDEFIIGLP 566 Query: 63 LNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 ++ DG E P + + R A R+ R G V L DE ++ EA S + + G ++ + Sbjct: 567 VSDDGKETPQSNKVRSVAGRLAARAAERGWRVYLQDEHGTSEEALSLMIDMGHSKSARQN 626 Query: 120 KVDSASAVIILESYFE 135 ++D+ +A+++LE YF Sbjct: 627 RIDAYAAMMVLERYFS 642 >UniRef50_Q3ZWC2 Putative Holliday junction resolvase n=5 Tax=Dehalococcoides RepID=RUVX_DEHSC Length = 133 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Query: 11 GTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQ 70 G K IG A+ + A PL ++ D T IE L+K QPD +I+GLP++++GT Sbjct: 2 GDKWIGAALSDPLRILASPLVILRRDDDTKTLENIESLVKTHQPDLLIIGLPISLNGTIG 61 Query: 71 PLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIIL 130 P + + F+ + +E+ DER ST EAR + + G + +A +IL Sbjct: 62 PQAEKVKSFSELLSRHLNIEIIYRDERFSTDEARRKMNDSGKNNKTVRDDAAAA--AVIL 119 Query: 131 ESYFEQ 136 + Y ++ Sbjct: 120 QDYLDE 125 >UniRef50_Q98Q13 Putative Holliday junction resolvase n=1 Tax=Mycoplasma pulmonis RepID=RUVX_MYCPU Length = 146 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 3/136 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRI-TGTARPLPAIKAQDG--TPDWNIIERLLKEWQPDEIIVG 60 +A D GTKS G A+ I A PL ++ N ++ K+++ D II+G Sbjct: 6 RKIALDLGTKSCGFAISDPISNSFAIPLENFFFEENNFKKVINKLKHYEKKYEFDTIILG 65 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PL M GT + +F + F + L DERLSTV+A++ L E ++ K K Sbjct: 66 YPLRMTGTRSERSIMVEEFEKLLRKTFSQRIVLVDERLSTVKAKAMLKETNISQSKIKEK 125 Query: 121 VDSASAVIILESYFEQ 136 DS +A ++L Y Sbjct: 126 KDSMAAALLLNYYLNN 141 >UniRef50_B9N0F0 Predicted protein n=4 Tax=rosids RepID=B9N0F0_POPTR Length = 254 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D G GVA+ T RPL ++ + + + + + + DE I+GLP Sbjct: 89 GFSLGVDLGLSRSGVALS--KGFTVRPLTVLELRGQKLEL-RLLEIAENEEVDEFIIGLP 145 Query: 63 LNMDGTEQPLTARARKFANR---IHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 + DG E P + + R A R + G V L DE ++ EA + + + G ++ + Sbjct: 146 KSWDGKETPQSNKVRSVAGRFAVLAAHRGWRVYLQDEHGTSTEATNRMIDMGLNKSTRQK 205 Query: 120 KVDSASAVIILESYFE 135 KVD+ +AV++LE YF Sbjct: 206 KVDAYAAVMVLERYFS 221 >UniRef50_UPI0001C3186B Holliday junction resolvase YqgF n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C3186B Length = 133 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 63/133 (47%), Gaps = 11/133 (8%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+G+ G A+ A P+ ++ + L+++ + D ++VGLPL Sbjct: 2 RVLALDYGSARCGCALSDPTGTLATPIAHVERPGTRKGMARLVALVRDREVDRVVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFG--VEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 + G + TA R FA R+ G + + L+DER +TV A GG + Sbjct: 62 GLSGADTAQTAEVRAFAQRLGEALGEQIPIDLYDERFTTVIAERV----GGRESE----- 112 Query: 122 DSASAVIILESYF 134 DS +A ++LE + Sbjct: 113 DSRAAAVLLEGWL 125 >UniRef50_O67469 Putative Holliday junction resolvase n=3 Tax=Aquificaceae RepID=RUVX_AQUAE Length = 131 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 6/134 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +LA D+GTK +G+A+G P + +++ I+ ++++ + ++IVGLPL Sbjct: 2 KVLAVDYGTKRVGLAIGDEELKIVSPKGTVSSKE---AVKKIKEIVEKSRVGKVIVGLPL 58 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 G E + F ++ E+ L DER +T EA L +G K D Sbjct: 59 TPSGKEGQRAKLVKDFVEKLREELPNTEIILWDERWTTAEAMRRL--EGLPPKKKKELKD 116 Query: 123 SASAVIILESYFEQ 136 SA+IILE Y Sbjct: 117 VISAMIILEEYLNS 130 >UniRef50_Q7NBY7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma gallisepticum RepID=RUVX_MYCGA Length = 142 Score = 128 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPD-----EIIV 59 +A D G++++G+A G A P I D+ LKE + ++ Sbjct: 3 YVALDVGSRTLGIATGDGEFKIASPYCVISF--NQYDFRQCLAELKEKTASFFYDFKFVI 60 Query: 60 GLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKG 119 G+P N+D T+ T F + + EV ++DE +++ A L + K Sbjct: 61 GMPKNIDQTKSSTTEMVENFIELLKANYKNEVIIYDESYTSIIADQLLIDNQIKAKKRKE 120 Query: 120 KVDSASAVIILESYFE 135 K+D +A +IL+S+F+ Sbjct: 121 KIDKLAAFVILQSFFD 136 >UniRef50_A4CMQ4 Holliday junction resolvase-like protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CMQ4_9FLAO Length = 132 Score = 128 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 6/131 (4%) Query: 9 DFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGT 68 D+G K G+AV + A L ++ + +E + E Q + I++G P MD + Sbjct: 2 DYGQKRTGIAVTDPLQMIASGLTTVQ---TPELLDFLESYMGEEQVERIVIGEPRRMDNS 58 Query: 69 EQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGG--YRALNKGKVDSAS 125 + A R F RI RF + + DER S+ A + E G + +K VD S Sbjct: 59 PSGIEAEIRSFIERIKKRFPDLPLSRQDERFSSQMAVRAMIEGGMKKKKRRDKAAVDKIS 118 Query: 126 AVIILESYFEQ 136 A +IL+SY Sbjct: 119 ATLILQSYLSS 129 >UniRef50_D2MPX3 RNAse H-fold protein YqgF n=2 Tax=Erysipelotrichaceae RepID=D2MPX3_9FIRM Length = 140 Score = 128 bits (324), Expect = 5e-29, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 3/135 (2%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQD--GTPDWNIIERLLKEWQPDEIIVGL 61 L D G+ + GV+ + A + I+ ++ + + +++ +PDEI++G Sbjct: 3 KYLGLDLGSVTCGVSASET-GLIAHTVETIRFKNEDYNEAMDKVLAIIEREKPDEIVLGY 61 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 PL ++G P + +F + G+ V L DER +TVEA L + R K K+ Sbjct: 62 PLLLNGDVGPRAQLSEEFKEVLEEECGLPVHLMDERFTTVEAEEILLQADISRKKRKKKI 121 Query: 122 DSASAVIILESYFEQ 136 D +AV IL+ Y ++ Sbjct: 122 DQLAAVQILQYYLDR 136 >UniRef50_B1ZVE0 Putative Holliday junction resolvase n=2 Tax=Opitutaceae RepID=RUVX_OPITP Length = 145 Score = 127 bits (321), Expect = 1e-28, Method: Composition-based stats. Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 2/136 (1%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 L D+GT+ IG+A G + A PLPA+ D W + ++ + +++VG PL Sbjct: 2 RCLGIDYGTRRIGLAYGDELGV-ATPLPALVEADPAKRWQSLLATARQRRVTDLVVGHPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 NMD T P A A R+ GV+V L DERL++ EA + + + G +D Sbjct: 61 NMDDTAGPKAKEAEAVAARLRTELAGVDVHLVDERLTSYEAEATISKTQRRAVRASGVID 120 Query: 123 SASAVIILESYFEQGY 138 S +A +IL+ + +Q + Sbjct: 121 SRAATLILQDFLDQRF 136 >UniRef50_C6X127 Putative Holliday junction resolvase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X127_FLAB3 Length = 141 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 31/135 (22%), Positives = 60/135 (44%), Gaps = 6/135 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +LA D+G G+A A L ++ ++ + + + ++VGLP + Sbjct: 7 ILAVDYGKARCGIAATDDFQIIASGLDTVETKNI---FTFLAGYFAANNVELVVVGLPTD 63 Query: 65 MDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN--KGKV 121 + G + KF + +F V+ + DER ++ A + + G + KG + Sbjct: 64 LKGNLSSIETDIAKFLEKFKTQFPTVKTERFDERFTSKMASFYISQSGKNKKKREEKGLI 123 Query: 122 DSASAVIILESYFEQ 136 D SA +IL+++ EQ Sbjct: 124 DKVSATLILQNFLEQ 138 >UniRef50_A5KT02 Holliday junction resolvase YqgF n=2 Tax=candidate division TM7 RepID=A5KT02_9BACT Length = 138 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 5/136 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 +++A D GTK IG+A P ++ + ++ E +P IIVG P Sbjct: 6 HSVIALDVGTKRIGIAHADTAVRFPVPYGTLEVDGLE--IERLREIIAELEPSLIIVGYP 63 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 N G T ++FA ++ F +++ DE L++V A L Q K +D Sbjct: 64 RNQQGEPTAQTGVVKEFAQKL-EPFQIDILFQDESLTSVLAEKYLQSQNKP--YTKSDID 120 Query: 123 SASAVIILESYFEQGY 138 + +A IIL Y E+ Y Sbjct: 121 AHAAAIILGDYLEEAY 136 >UniRef50_D1B1D4 Holliday junction resolvase YqgF n=2 Tax=Campylobacterales RepID=D1B1D4_SULD5 Length = 135 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 6/135 (4%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 + + D G K IGVA+ +G P AI ++ ++ L EW+ + ++VGLP Sbjct: 2 KKIASLDVGLKRIGVALC-LASGIVTPQEAILRKNRDQAAREVDAFLTEWEIELLVVGLP 60 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 +E+ + R F + + F EV DE S++EA+ + QG R GK+D Sbjct: 61 KGGS-SEEEMKRRITHFVSLLA--FSGEVVYQDEYGSSLEAKEMM--QGIMRQKRDGKID 115 Query: 123 SASAVIILESYFEQG 137 S +A +ILE Y + Sbjct: 116 SIAAKVILERYLDTQ 130 >UniRef50_Q8EUR7 Putative Holliday junction resolvase n=1 Tax=Mycoplasma penetrans RepID=RUVX_MYCPE Length = 142 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 5/137 (3%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 ++ +LA DFGTK IG A+ P I + + I +++E EI++G Sbjct: 4 LNSKILAIDFGTKIIGTAINDINLNLCLPYCEI--TNNELKFKKILEIVEEENIKEIVIG 61 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRF---GVEVKLHDERLSTVEARSGLFEQGGYRALN 117 P + F N++ +E+ DE ST ++ L + Sbjct: 62 FPKTQNSYVSERHQLIIDFKNQLSELLKNKNIEICFFDESYSTKSSKESLMNFNVKTSKL 121 Query: 118 KGKVDSASAVIILESYF 134 K D +A IILE+Y Sbjct: 122 KKNKDMIAASIILENYL 138 >UniRef50_D2UEP3 Putative holliday junction resolvase protein n=1 Tax=Xanthomonas albilineans RepID=D2UEP3_XANAL Length = 165 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 3/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 GT+L FD G + IGVAVG R AR L I PDW ++RL +W+P ++VG P Sbjct: 21 GTVLGFDVGHRRIGVAVGSRFGSGARALAVIDVHAQGPDWPALDRLHAQWRPHGLVVGDP 80 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGL---FEQGGYRALNKG 119 L +DG +QP RA FA + R+ + V L DER S+VEA G R + Sbjct: 81 LTLDGADQPNRKRAHAFARELGARYCLPVVLVDERSSSVEAAQRFAVDRAAGRKRRRDAD 140 Query: 120 KVDSASAVIILESYF 134 +D+ +A +I+E + Sbjct: 141 ALDALAAAVIVERWL 155 >UniRef50_A3PCK0 Putative Holliday junction resolvase n=8 Tax=Prochlorococcus marinus RepID=RUVX_PROM0 Length = 153 Score = 124 bits (313), Expect = 8e-28, Method: Composition-based stats. Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 4/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++L+ D G+K IG+A + T+ LPA+K + + II + E+ IVG+P Sbjct: 9 KSILSLDIGSKRIGLAYCDPLCITSNILPAVKRFENNQEIKIIRNYINEFNLTGFIVGIP 68 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 L+ G + + + + +E ST E+ G + G +D Sbjct: 69 LDEKGKMTTQAIDCKNYGQLLSNELKLPFSYVNEHSSTWESSERF----GIKKDKSGLID 124 Query: 123 SASAVIILESYFEQG 137 S SA IILE + E+G Sbjct: 125 SFSAKIILEQWIEEG 139 >UniRef50_C8XD23 Holliday junction resolvase YqgF n=2 Tax=Actinomycetales RepID=C8XD23_NAKMY Length = 169 Score = 124 bits (313), Expect = 9e-28, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 13/147 (8%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ------------DGTPDWNIIERLL 49 G L D GT +GVA A P+ ++ + T D + + L+ Sbjct: 15 KGVRLGVDVGTVRVGVARSDPAGILATPVTTLQRSAAPSSGKSGDRAEPTADLSALRDLV 74 Query: 50 KEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGLF 108 E E++VGLP + G E AR + + V V DERL+TV A L Sbjct: 75 VEHDVVEVVVGLPTTLRGMEGSAVTAARAYGQALAALIAPVPVVYVDERLTTVTADRVLA 134 Query: 109 EQGGYRALNKGKVDSASAVIILESYFE 135 + G + VD +A IL++ + Sbjct: 135 QAGIKGKARRAVVDQVAATRILQNRLD 161 >UniRef50_Q72HK9 Putative Holliday junction resolvase n=4 Tax=Thermaceae RepID=RUVX_THET2 Length = 135 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 1/134 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 + A D G IG+AVG+ A + + D + ++ +++VGLPL Sbjct: 2 RVGALDVGEARIGLAVGEEGVPLASGRGYLVRKTLEEDVEALLDFVRREGLGKLVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 D E + + R GVEV+L DER +T A+ L +KGK+D Sbjct: 62 RTDLKESAQAGKVLPLVEALRAR-GVEVELWDERFTTKLAQERLKHAPKRLRRDKGKLDE 120 Query: 124 ASAVIILESYFEQG 137 +AV++LE Y +G Sbjct: 121 LAAVVLLEDYLARG 134 >UniRef50_A4E6Q1 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6Q1_9ACTN Length = 119 Score = 123 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 32/111 (28%), Positives = 57/111 (51%) Query: 26 TARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHG 85 A P+ + A + T L+++++PD ++ G PL M G P R A +I Sbjct: 1 MAMPVKVLPAAEVTGMAKTFRYLVEDYEPDILVSGRPLTMAGEPGPQAERVAAVAQKIAD 60 Query: 86 RFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQ 136 + ++ DERLS+ EA+ L EQG +GK+D +A + L+++ ++ Sbjct: 61 ELDLPLEFEDERLSSQEAKRILREQGLNEKQMRGKIDMIAASLFLQTWLDR 111 >UniRef50_C0QZA0 Holliday junction resolvase n=1 Tax=Brachyspira hyodysenteriae WA1 RepID=C0QZA0_BRAHW Length = 139 Score = 123 bits (310), Expect = 2e-27, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L DFG K G A P I+ + + +++E D ++ GLPL+ Sbjct: 2 VLGIDFGRKKTGTAFMDMDIKIPFPCRLIEESNARKVKRALMDIIEEKNIDTVVFGLPLS 61 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 +G E A R+F+ + V++ DE ++ EA L G + + D Sbjct: 62 DEGKESDWCAEIRRFSEFLLKSVKVDIVFVDEYGTSKEADFILR--GKKKKVKNKANDLI 119 Query: 125 SAVIILESYFE 135 +A +ILE+Y Sbjct: 120 AATLILENYLN 130 >UniRef50_Q254W0 Putative Holliday junction resolvase n=13 Tax=Chlamydiaceae RepID=RUVX_CHLFF Length = 150 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 3/139 (2%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKA-QDGTPDWNIIERLLKEWQPDEIIVG 60 L D+G + IG+A + P+ I+A + + +++ E + +++G Sbjct: 7 KKIFLGVDYGQRRIGLAYAASPLFISLPIGFIEAGKTLEATAQSLAKIILEREVSCVVLG 66 Query: 61 LPLNMD-GTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLF-EQGGYRALNK 118 P+ M G + L K ++ I V+V L DERLS+ +A L + G R K Sbjct: 67 NPIPMQIGQKSSLQEEILKISSLIQEFCHVDVVLWDERLSSAQAERMLKCDCGLSRKQRK 126 Query: 119 GKVDSASAVIILESYFEQG 137 GK DS +A +IL ++ E Sbjct: 127 GKTDSVAATLILTNFLESS 145 >UniRef50_D0J8Y2 Holliday junction resolvase-like protein n=2 Tax=Blattabacterium RepID=D0J8Y2_BLASP Length = 141 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 5/133 (3%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +L D+G G+++ + A L AI ++ + + L+ + +I++GLP Sbjct: 3 RILGIDYGKVITGLSITDPLQKFAFGLNAIPTKN---LMSFLAILIAKKPIKKIVIGLPK 59 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALN-KGKV 121 ++ + + F ++ H + + + DER ++ A S + E G + KG + Sbjct: 60 TLNNKNALIEKSIQNFISKFHKKNPKIRIVRIDERFTSKIAFSTMIELGLKKKRRQKGLI 119 Query: 122 DSASAVIILESYF 134 + SA IIL+SY Sbjct: 120 NKISATIILQSYL 132 >UniRef50_C7LYT3 Holliday junction resolvase YqgF n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7LYT3_ACIFD Length = 138 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 4/132 (3%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 G L D GTK IGVAV A PL I A+ P + L+ ++VGLP Sbjct: 7 GRALGVDLGTKRIGVAV--AEGSLALPLEVIDAR--GPWRARLAELVASVGASVVVVGLP 62 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + +DG+E AR R+++ + V V DERLS+ A L G +G VD Sbjct: 63 IGLDGSEGRAAARVRQWSEGLAEHLEVPVVFVDERLSSQAAERRLGAAGVDARSRRGAVD 122 Query: 123 SASAVIILESYF 134 + +A ILE + Sbjct: 123 AFAATEILERWL 134 >UniRef50_A9SA15 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SA15_PHYPA Length = 172 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + G + D G G+A+ RPL + Q G I ++ + DE +VG Sbjct: 11 VRGHTVGVDLGDAKTGLAIS-LGGYAPRPLTVV-RQRGDKLLETILQVGIPQRADEFVVG 68 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGV-------EVKLHDERLSTVEARSGLFEQGGY 113 LP DG + + R FA R+ GV V L DE ++ +A + + G Sbjct: 69 LPKAWDGKDSDQANKCRSFAGRLANIAGVVAYCRGWRVYLQDEYGTSQDALDYMIDMGSN 128 Query: 114 RALNKGKVDSASAVIILESYFEQG 137 R K ++D+ +A +L YFE G Sbjct: 129 RRSRKEQLDAYAATALLCRYFESG 152 >UniRef50_Q2S3N5 Putative Holliday junction resolvase n=1 Tax=Salinibacter ruber DSM 13855 RepID=RUVX_SALRD Length = 143 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 6/136 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++ D GTK +GVAV + A+P ++++ L I+VG PL Sbjct: 9 RVVGIDVGTKRVGVAVADPLRLFAQPHGTYA---PDEALDVLQALRDADGIARIVVGWPL 65 Query: 64 NMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGY--RALNKGK 120 +GT + T + RI G VEV DER ++ A+ L E G +KG+ Sbjct: 66 TEEGTAEEATEMVEAYVERIREALGTVEVAREDERYTSEIAKDLLREAGVSQPGRYDKGR 125 Query: 121 VDSASAVIILESYFEQ 136 VD+A+A +IL+ + + Sbjct: 126 VDAAAAAVILQGFLNR 141 >UniRef50_D1IMS6 Whole genome shotgun sequence of line PN40024, scaffold_25.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D1IMS6_VITVI Length = 224 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 6/139 (4%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNI--IERLLKEWQPDEIIV 59 G LL D G K +G+AV A PL + + D + L+ + IV Sbjct: 76 RGRLLGLDVGDKYVGLAVSDLHNKIASPLSVLLRKKSNIDLMATDFQSLISDLSLAGFIV 135 Query: 60 GLPLNMDGTEQPLTARARKFANRI---HGRFGVEVKLHDERLSTVEARSGLFEQGGYRAL 116 G P N P + F + + GV DE ++ L + Sbjct: 136 GYPFN-RQRSSPTAVNVKVFIDDLCKTGKLEGVRYTYWDECFTSKNVELLLKPLNLHPVQ 194 Query: 117 NKGKVDSASAVIILESYFE 135 +K +D +AV IL+ Y + Sbjct: 195 SKTILDKFAAVGILQGYLD 213 >UniRef50_P57114 Putative Holliday junction resolvase n=3 Tax=Mycoplasma RepID=RUVX_MYCPN Length = 140 Score = 121 bits (304), Expect = 9e-27, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 5/136 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKE--WQPDEIIVGL 61 +L DFG K IG A+ I P Q+ N + + LK+ ++ +I++G Sbjct: 4 ILGIDFGLKRIGTALVNTIDRFPSPFRVFAVQNNLQQAVNTLFKDLKQAGYELVQIVIGF 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKV 121 P + + KF I RF V V L DE +T E ++ L E G K Sbjct: 64 P--HFHYQSSIQVSIHKFVELIKTRFNVPVTLIDESGTTSEVKANLQELGLKNRTFKKAK 121 Query: 122 DSASAVIILESYFEQG 137 D+ +A +ILE + Q Sbjct: 122 DTLAATLILERFLNQQ 137 >UniRef50_Q9AV16 Os10g0555200 protein n=4 Tax=Poaceae RepID=Q9AV16_ORYSJ Length = 237 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 G L D G GVAVG+ IT RPL +K + + + + ++ + DE+IVGL Sbjct: 73 CGFSLGVDLGEARTGVAVGRGIT-LPRPLTVLKLRGQKLELM-LLDIAQQQEADELIVGL 130 Query: 62 PLNMDGTEQPLTARARKFANRIH---GRFGVEVKLHDERLSTVEARSGLFEQGGYRALNK 118 P++ DG+E P + + R R+ G+ V L DE +T++A + +G R+ Sbjct: 131 PVSADGSETPQSNKVRSVVGRLAVQAADRGLRVYLQDEYGTTIDALEFMISRGVKRSARD 190 Query: 119 GKVDSASAVIILESYFEQG 137 K D+ SA++ILE YF Sbjct: 191 VKSDAYSAMMILERYFSSS 209 >UniRef50_C5EZY4 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=C5EZY4_9HELI Length = 135 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 4/135 (2%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLP 62 ++A D G K IG+A Q + PLP I ++ + L++ P +++G+P Sbjct: 2 QNIIALDIGLKRIGIA--QFLQNIPIPLPPILRKNRNQAARDVSNLIQMKNPQILVIGIP 59 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 + D + + R + F N + G+E+ DE S+ EA + + G +D Sbjct: 60 QDGDSSL-EMERRIKHFINLLEIPKGIEICFIDESFSSFEALQKM-QGSKKNKKKDGSLD 117 Query: 123 SASAVIILESYFEQG 137 S +A+IILE Y Sbjct: 118 SLAALIILERYLMSQ 132 >UniRef50_C1XG67 Putative uncharacterized protein n=1 Tax=Meiothermus ruber DSM 1279 RepID=C1XG67_MEIRU Length = 136 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D G IG+AVG+ + A + ++ D + + + + +VGLPL Sbjct: 2 RVVALDVGEARIGLAVGEIGSPWAFGRGYLVRKNLEADLEALAAFAERERAERFVVGLPL 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 DG R + + R G++++L DER +T ++ L KGK+D Sbjct: 62 RTDGRPSAQAERVQALVEAMRER-GMQLELLDERYTTKLGQNRLKHAPKRIRQEKGKLDE 120 Query: 124 ASAVIILESYFEQ 136 A+A+ +LESY + Sbjct: 121 AAAIALLESYLAR 133 >UniRef50_B1AJ09 Putative Holliday junction resolvase n=15 Tax=Ureaplasma RepID=RUVX_UREP2 Length = 147 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 9/144 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAI--KAQDGTPDWNIIERLLKEW--QPDEIIV 59 LA D GTKS G A+ + A L + D T I+ ++ + + D I++ Sbjct: 2 RKLALDLGTKSCGFAISDLLGIIASGLDNFIYEENDFTAVLAKIDEIMINYHHEIDTIVL 61 Query: 60 GLPLNM-DGTEQPLTARARKFANRIHGRF----GVEVKLHDERLSTVEARSGLFEQGGYR 114 G P N+ DG++ T F + F +++ DER ST A L Sbjct: 62 GYPTNVYDGSKNERTYLIESFYALLKQHFLNHEKIKIVYEDERFSTKIATQRLKNSCVKA 121 Query: 115 ALNKGKVDSASAVIILESYFEQGY 138 A K D SAV+ILESY + + Sbjct: 122 AKIKKVKDKMSAVVILESYLSKNH 145 >UniRef50_A5EXP5 Putative uncharacterized protein n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EXP5_DICNV Length = 129 Score = 118 bits (298), Expect = 5e-26, Method: Composition-based stats. Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 8/136 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M +L D GT GVA+GQ +TG A+PL + L+++W+ + I++G Sbjct: 1 MVQWVLGIDVGTYHTGVAIGQSVTGLAKPLQRFNLPLKQVHADTFSALVQQWKVNCIVIG 60 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 LP DG + PL+ + A+ +GV V DE L++ A+ + ++K Sbjct: 61 LPSLADGKKHPLSDEIHRLADECIKLYGVPVHFIDETLTSHAAQMRF-----PKTIDK-- 113 Query: 121 VDSASAVIILESYFEQ 136 DSA+A +I+E + Sbjct: 114 -DSAAAAVIVEDFLSS 128 >UniRef50_Q4A632 Putative Holliday junction resolvase n=2 Tax=Mycoplasma synoviae 53 RepID=RUVX_MYCS5 Length = 137 Score = 118 bits (296), Expect = 8e-26, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 1/133 (0%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQ-DGTPDWNIIERLLKEWQPDEIIVGLP 62 L DFG IG A+ + L I+ L E++ D+ I+G P Sbjct: 2 RKLGIDFGLSRIGFAISDESNSFSLALENFDYDGSYEKIIQKIQLFLDEYKIDKFIIGYP 61 Query: 63 LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVD 122 LN G + +F + F ++KL +E S+ +A L + K K D Sbjct: 62 LNSRGEKTKTCLLIDEFIIHLEKNFDQKIKLINESYSSRKASEILHQANIKNKKQKDKKD 121 Query: 123 SASAVIILESYFE 135 +A IIL+ Y + Sbjct: 122 MLAAKIILQDYLD 134 >UniRef50_C6HU38 Holliday junction resolvase YqgF n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HU38_9BACT Length = 168 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 10/142 (7%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLP--------AIKAQDGTPDWNIIERLLKEWQP 54 G L+ D+G + +GVA+ ARPL I Q+G + ++ + Sbjct: 9 GVLMGIDWGGRRVGVALSDPSRTLARPLTVLVRDGSGTIPFQEGEKLLASLRKIATDHDV 68 Query: 55 DEIIVGLP-LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGY 113 ++ G+P ++ G P + A + + + LHDE S+ AR + Sbjct: 69 TGLVFGIPYYHLSGDPNPHAPLFLRVARDLSRDLALPLFLHDEGQSSEAAREI-RKGHPG 127 Query: 114 RALNKGKVDSASAVIILESYFE 135 R + +D +A +L+ + + Sbjct: 128 RRNSAQSLDHVAAATLLQGFLD 149 >UniRef50_B5Y8L7 Putative uncharacterized protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8L7_COPPD Length = 137 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 6/132 (4%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGT-PDWNIIERLLKEWQPDEIIVGLPL 63 ++A DFG K IG+A A P ++ D ++++ P +++GLP Sbjct: 2 IVAVDFGLKRIGMARSDDSETWAFPHKTLEGNDLETKLIIELKKI----GPRVVVLGLPR 57 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 NMDGTE + R R+ G V DERL++ +KGKVD Sbjct: 58 NMDGTEGEMAVAVRALGQRLED-VGFTVDFWDERLTSRLVSRQDPRSLKKAIKDKGKVDL 116 Query: 124 ASAVIILESYFE 135 SAV+IL+ Y Sbjct: 117 MSAVLILQEYIN 128 >UniRef50_Q5JN17 Os01g0764700 protein n=5 Tax=Poaceae RepID=Q5JN17_ORYSJ Length = 178 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 6/139 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDW--NIIERLLKEWQPDEIIVGL 61 LL D G+K +G+AV A PL + + L+ ++ +VG Sbjct: 23 RLLGLDVGSKYVGLAVSDDKNRIALPLSVLSRTKTNISLMADDFVTLVSKYSLAGFVVGY 82 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVE---VKLHDERLSTVEARSGLFEQGGYRA-LN 117 P N+ G P + R + ++ DE ++ + L + Sbjct: 83 PFNLQGQSSPNALQVRLLVGELCKTGKLDDMSYTYWDENFTSKCVEALLHPLKLHDPVET 142 Query: 118 KGKVDSASAVIILESYFEQ 136 K D +AV IL+ Y + Sbjct: 143 KTMTDKFAAVCILQRYLDN 161 >UniRef50_Q30T74 Putative Holliday junction resolvase n=3 Tax=Campylobacterales RepID=RUVX_SULDN Length = 130 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +A D G K IG+A PL A++ ++ +++ L EW+ D ++VG+PL Sbjct: 2 KYIAIDLGLKRIGLAYS-AHKDLVTPLKAVERKNRDQAARDVKKTLIEWEVDAVVVGIPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +E + R F N + F E+ DE S++EA S + G + + G++DS Sbjct: 61 GGS-SEDEMRRRVAHFMNLVA--FEGEIFYQDESNSSIEAESMMR--GEIKYIRDGRIDS 115 Query: 124 ASAVIILESYFEQ 136 SA+IIL+ Y Q Sbjct: 116 ISAMIILQRYLRQ 128 >UniRef50_Q83HU9 Putative Holliday junction resolvase n=2 Tax=Tropheryma whipplei RepID=RUVX_TROW8 Length = 145 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 7/130 (5%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L DFG+ IGVA A P+ + I + + DE+++GLPL + Sbjct: 11 LGLDFGSTRIGVAR--NCGSLAVPVGVLPRAS----CAEILGYISRYSIDEVVIGLPLTL 64 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G E+ A++F+ + GV+V+ DER +TV A + G + VD+A+ Sbjct: 65 AGKEKQSARLAKEFSRFLVSS-GVQVRFFDERFTTVIATQKFYSLGKGVKQIRKCVDAAA 123 Query: 126 AVIILESYFE 135 A ++L+ + + Sbjct: 124 ATVMLQLFLD 133 >UniRef50_A6DAL6 Holliday junction resolvase-like protein n=4 Tax=Epsilonproteobacteria RepID=A6DAL6_9PROT Length = 130 Score = 115 bits (290), Expect = 4e-25, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 9/131 (6%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 ++A D G K IG+A PL AI ++ + LLKE++ D ++VG+P Sbjct: 3 RIIAIDVGLKRIGIAYT-PNASVVVPLNAIIRKNRNQAAKEVSNLLKEYKADILVVGIPK 61 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 T + +T R + F N I F +++ DE ++ + G + G++DS Sbjct: 62 ----TNEEMTKRIKHFTNLID--FNGKIEFVDESFTSAIVEEEIK--GKIKHKRDGRIDS 113 Query: 124 ASAVIILESYF 134 +A ILES+ Sbjct: 114 LAAKKILESFL 124 >UniRef50_UPI00019786D3 Holliday junction resolvase-like protein n=1 Tax=Helicobacter cinaedi CCUG 18818 RepID=UPI00019786D3 Length = 140 Score = 115 bits (289), Expect = 5e-25, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 7/139 (5%) Query: 2 SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGL 61 + +LA D G K IG+AV Q G P+ I ++ + +LK + + ++VGL Sbjct: 3 NKKILACDVGLKRIGLAVTQ--LGIILPIEPIIRKNRNQASKELSEILKTREIEILVVGL 60 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRA---LNK 118 P + R F + FG E+ DE +++EA G Sbjct: 61 PSGGEAGHSDTRKRILHFVGLVA--FGGEIAYIDEDYTSLEALQSSAYMGVQNRLKIQKD 118 Query: 119 GKVDSASAVIILESYFEQG 137 G++DS SA +ILE + E Sbjct: 119 GRLDSLSATLILERFLESN 137 >UniRef50_Q7VGU1 Putative Holliday junction resolvase n=2 Tax=Helicobacter RepID=RUVX_HELHP Length = 138 Score = 115 bits (288), Expect = 7e-25, Method: Composition-based stats. Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 7/140 (5%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 M+ +LA D G K IG+A PLP I + ++ +LKE ++VG Sbjct: 1 MNHCILACDVGLKRIGLAT--LKQEIILPLPPIIRINRNQAAKELDNVLKERNIHILVVG 58 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARS---GLFEQGGYRALN 117 +P + R F + + F E+ +E ++ A + Q RA Sbjct: 59 MPSGGEAEHSDTQKRISHFISLLS--FEGEICFVNEDYTSFNALQSLSYMKRQNRARAQK 116 Query: 118 KGKVDSASAVIILESYFEQG 137 G++DS SA IL+ Y + Sbjct: 117 DGRIDSLSACEILQRYIQSQ 136 >UniRef50_B6BIR6 Putative uncharacterized protein n=3 Tax=Campylobacterales RepID=B6BIR6_9PROT Length = 131 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 6/131 (4%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPL 63 +A D G K IG+A PLPAI ++ +++ LKEW+ D +++G+PL Sbjct: 2 KYIAIDLGLKRIGLAYS-AHKDLVTPLPAIMRKNRNQASAEVKKALKEWEVDAVVIGVPL 60 Query: 64 NMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDS 123 +E + R F N + F E+ DE S++EA + + G + + G++DS Sbjct: 61 GGS-SEDEMRRRIAHFMNLV--NFEGEILYQDEAGSSLEAENMMK--GEIKYIRDGRIDS 115 Query: 124 ASAVIILESYF 134 SA+IIL+ Y Sbjct: 116 ISAMIILQRYL 126 >UniRef50_B3QXA0 Holliday junction resolvase YqgF n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXA0_CHLT3 Length = 143 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 6/140 (4%) Query: 1 MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVG 60 + +LA DFGTK G+A ++ + + IE+L ++I+VG Sbjct: 6 IKKRVLAIDFGTKRCGLAKTDPFQLFSQTVGTFEEATLYKQIREIEKL---DGIEKILVG 62 Query: 61 LPLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRA--LN 117 P N DG+ T F R+ F + ++ DE S+ A L G R Sbjct: 63 YPTNGDGSANHTTKAVDGFLERLSLEFSTIPIEPIDEFGSSKAAMRLLIASGEKRKSRQK 122 Query: 118 KGKVDSASAVIILESYFEQG 137 KG++DSA+A ++L++Y E+ Sbjct: 123 KGRLDSAAAALLLQNYLERQ 142 >UniRef50_Q7V847 Putative Holliday junction resolvase n=3 Tax=Cyanobacteria RepID=RUVX_PROMM Length = 161 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 4/132 (3%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 L+ D G + IG+A + T PLP ++ + D +++ + + ++VGLPL+ Sbjct: 12 LSLDLGKRRIGLAGCDPLGITVSPLPPLQRKSFERDLKVLQWHCTSRKVEGLVVGLPLDA 71 Query: 66 DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSAS 125 G ++ R+ + + L +E S+ A QG G++DSA+ Sbjct: 72 KGLPTDQARHYERYGQRLARALKLPLALVNEHSSSWAAAERYNLQG----DRSGQLDSAA 127 Query: 126 AVIILESYFEQG 137 A ++LE + +G Sbjct: 128 AALLLEQWLREG 139 >UniRef50_C9RIY6 Holliday junction resolvase YqgF n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RIY6_FIBSS Length = 134 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 3/133 (2%) Query: 6 LAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNM 65 +A D+G +GVA G A I + + +++L++ + DE +VG+P + Sbjct: 1 MALDYGEHRVGVAFGDSELKMAFSRETIDQKTTN-LFERLDQLVRLNKIDEFVVGMPYHP 59 Query: 66 DGTEQPLTARARKFANRIHGRF-GVEVKLHDERLSTVEARSGL-FEQGGYRALNKGKVDS 123 DG + F + RF G+++ DE S+V+A+ + + NK +D Sbjct: 60 DGRKDGKNVVVEAFIKDLTLRFPGMKIHTQDESYSSVQAQEFTSYMSKKKKQKNKAIIDR 119 Query: 124 ASAVIILESYFEQ 136 +A IIL+ +F++ Sbjct: 120 TAAAIILQRWFDE 132 >UniRef50_A6WCF6 Putative Holliday junction resolvase n=4 Tax=Actinomycetales RepID=RUVX_KINRD Length = 188 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 2/135 (1%) Query: 3 GTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDG-TPDWNIIERLLKEWQPDEIIVGL 61 G LA D G+ +G+A A P+ + G D I + EI++GL Sbjct: 4 GVRLAVDVGSVRVGLAACDPAGVIASPVRTLVRDPGHDADVAEIAAEARARGAVEIVLGL 63 Query: 62 PLNMDGTEQPLTARARKFANRIHGRFG-VEVKLHDERLSTVEARSGLFEQGGYRALNKGK 120 PL++DG+E P RA +A++I V V+L DERLSTV A L G + Sbjct: 64 PLSLDGSEGPAALRALDYADKIVRSVPEVPVRLVDERLSTVGAHRALHAAGLKEKQFRAV 123 Query: 121 VDSASAVIILESYFE 135 VD A+AV++L++ + Sbjct: 124 VDQAAAVVLLQATLD 138 >UniRef50_A3EWG0 Putative holliday junction resolvase YqgF n=2 Tax=Leptospirillum sp. Group II RepID=A3EWG0_9BACT Length = 171 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 13/146 (8%) Query: 4 TLLAFDFGTKSIGVAVGQRITGTARPLPAIK-AQDGTPDWN-------IIERLLKEWQPD 55 LL D+G +G+A+ + PL I+ P + ++R+ E + Sbjct: 17 PLLGIDWGEARVGLAMSDNSLRFSEPLGVIENRCSFLPPFRIPSKSGGALKRICTEKKIQ 76 Query: 56 EIIVGLP-LNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST-VEARSGL---FEQ 110 I+ G+P ++ G P + ++A I G V L DE L++ V + + Sbjct: 77 GIVFGVPWYHLSGDPNPKSEVFVEYARLIRSLTGCPVFLWDEGLTSDVLKSERMSGKRKY 136 Query: 111 GGYRALNKGKVDSASAVIILESYFEQ 136 ++ +D SA +IL+S+ ++ Sbjct: 137 SRSPKRSRDPIDHYSATLILQSFLDE 162 >UniRef50_Q3AYS6 Putative Holliday junction resolvase n=18 Tax=cellular organisms RepID=RUVX_SYNS9 Length = 164 Score = 111 bits (279), Expect = 7e-24, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 5 LLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN 64 +L+ D G K IG+A + T PLPA+ D ++ + ++VGLPL+ Sbjct: 14 VLSLDVGRKRIGLAGCDPLGITVSPLPALHRGRFDNDLLVLRHHCQTRSVQGLVVGLPLD 73 Query: 65 MDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSA 124 G R++ R+ G+ + +E ST A G + G++DSA Sbjct: 74 AAGQPTAQAEHCRRYGVRLAQSLGLPLAWVNEHSSTWAAGER----HGLQGDRTGRLDSA 129 Query: 125 SAVIILESYFEQG 137 +A ++LE + + G Sbjct: 130 AAALLLEQWLQDG 142 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.316 0.195 0.634 Lambda K H 0.267 0.0598 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,233,459,703 Number of Sequences: 3077464 Number of extensions: 63321260 Number of successful extensions: 159538 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 727 Number of HSP's successfully gapped in prelim test: 200 Number of HSP's that attempted gapping in prelim test: 157818 Number of HSP's gapped (non-prelim): 937 length of query: 138 length of database: 1,040,396,356 effective HSP length: 102 effective length of query: 36 effective length of database: 726,495,028 effective search space: 26153821008 effective search space used: 26153821008 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 88 (38.0 bits)