57 c3js6A_ Probab=99.24   E-value=1.7e-09  Score=71.37  Aligned_columns=219  Identities=17%

Q ss_pred             EEEEEEECCCEEEEEEEECCCEEEEEEECCCCCHHH--------------------------------------------
Q ss_conf             899996253249999994893899997337888999--------------------------------------------
Q batch____         3 YSIGIDSGSTATKGILLADGVITRRFLVPTPFRPAT--------------------------------------------   38 (255)
Q Consensus         3 ~~iGID~G~t~~k~v~~~~g~~~~~~~~~~~~~~~~--------------------------------------------   38 (255)
                      |++|||+|.+.||++.-++..+..+.+.+....+..                                            
T Consensus         4 ~i~gID~G~~~tK~~~~~~~~~~ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~vG~~a~~~~~~~~~~~~~~   83 (321)
T c3js6A_           4 YVXALDFGNGFVKGKINDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTGKDTASTN   83 (321)
T ss_dssp             EEEEEEECSSEEEEEETTEEEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCCEECCCST
T ss_pred             EEEEEEECCCEEEEEECCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECHHHHHCCCCCCCCCCCC
T ss_conf             68999708731899988902674355414654433223345455432102333106827898257751154534444456


Q ss_pred             ----------HHHHHHHHHHHCCCCCCEE--EEECCHHHHHHHC----------------------------CCCCCHHH
Q ss_conf             ----------9999999987026754389--9616037754202----------------------------36755278
Q batch____        39 ----------AITEAWETLREGLETTPFL--TLTGYGRQLVDFA----------------------------DKQVTEIS   78 (255)
Q Consensus        39 ----------~~~~~l~~l~~~~~~~~~i--~~TG~g~~~~~~~----------------------------~~~v~E~~   78 (255)
                                .+..++..+..........  .+||.........                            ...++|+.
T Consensus        84 ~k~~~~~~~~l~l~al~~~~~~~~~~~~~~~lv~gLP~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~i~I~~v~V~pEg~  163 (321)
T c3js6A_          84 DRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGXPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPX  163 (321)
T ss_dssp             TGGGSHHHHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEEEEEECCC
T ss_conf             73367547999999999998623787630489972895787688999999850481599987878999999999995751


Q ss_pred             HHHHHH--------HHHCCCCCEEEEECCCCEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf             999999--------986899878999746975999993697377886168656563168999998709988899886420
Q batch____        79 CHGLGA--------RFLAPATRAVIDIGGQDSKVIQLDDDGNLCDFLMNDKCAAGTGRFLEVISRTLGTSVEQLDSITEN  150 (255)
Q Consensus        79 A~a~ga--------~~l~~~~~~VidiGG~~~~i~~i~~~g~~~~~~~~~~~~~G~G~~le~~a~~l~l~~~~~~~~~~~  150 (255)
                      +..+..        .......-.|+|+||+++++..++..........+..  .|+.++++.+++++.-.+         
T Consensus       164 ga~~~~~~~~~~~~~~~~~~~v~viDiG~gTtD~~~~~~~~~~~~~~~~~~--~G~~~~~~~I~~~i~~~~---------  232 (321)
T c3js6A_         164 GTLLDLNXENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNXKRVEEESFVIN--KGTIDFYKRIASHVSTPR---------  232 (321)
T ss_dssp             HHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEES--CCHHHHHHHHHHHTCCHH---------
T ss_pred             HHHHHHCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEECCEECCHHCCCCC--HHHHHHHHHHHHHHHHHC---------
T ss_conf             566530134445422234585799975898079999728500400004420--128999999999975420---------


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH----CCCCCCEEEEEECCCCHHHHHHHHHHH
Q ss_conf             6877757720102156689998659998999999999999999999971----888883899830125489999999982
Q batch____       151 VTPHAITSMCTVFAESEAISLRSAGVAPEAILAGVINAMARRSANFIAR----LSCEAPILFTGGVSHCQKFARMLESHL  226 (255)
Q Consensus       151 ~~~~~i~~~c~vf~~~~i~~~~~~g~~~~di~a~l~~~i~~~~~~~~~~----~~~~~~Ivl~GG~a~~~~i~~~~~~~~  226 (255)
                                          ...+.....+......+..++.+...+.+    ....+.|+++||.+..  +.+.+++++
T Consensus       233 --------------------~~~~~id~~~~i~~~~~~~~~~i~~~i~~~~~~~~~~~~vi~~GGGa~~--l~~~l~~~~  290 (321)
T c3js6A_         233 --------------------MIEKGLEFKDEFYKEQDSLIEEVXSNFEITVGNINSIDRIIVTGGGANI--HFDSLSHYY  290 (321)
T ss_dssp             --------------------HHHSCCCCHHHHHHHHHHHHHHHHHHHHHHTCCTTSCSEEEEESTTHHH--HHHHHHHHS
T ss_pred             --------------------CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHH--HHHHHHHHC
T ss_conf             --------------------4443244178999999999999999999863030014559997224899--999999754


Q ss_pred             CCCEEECCCCCHHHHHHHHHHHHHHHCC
Q ss_conf             8972686983166999999998785116
Q batch____       227 RMPVNTHPDAQFAGAIGAAVIGQRVRTR  254 (255)
Q Consensus       227 ~~~v~~p~~p~~~~A~GAAl~a~~~~~~  254 (255)
                      +..+.+++||+++.|.|-..+++-...+
T Consensus       291 ~~~~~~~~n~~~aNa~G~~~~g~~~~~~  318 (321)
T c3js6A_         291 SDVFEKADDSQFSNVRGYEKLGELLKNK  318 (321)
T ss_dssp             SSCEECCSSGGGHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9718984982899999999999997764