Phyre 2 alignment of P76547 with c3es5A_

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Job Description | P76547
Confidence | 9.09% | Date | Thu Jan 5 12:24:24 GMT 2012
Rank | 12 | Aligned Residues | 22
% Identity | 45% | Template | c3es5A_
PDB info | PDB header:virus | Chain: A: PDB Molecule:putative capsid protein; | PDBTitle: crystal structure of partitivirus (psv-f)
Resolution | 3.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 127 | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | F | T | G | A | K | R | F | Q | Y | F | Q | T | M | Y | D | M | E | R | Q | I | N | A | N | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | F | K | A | A | R | . | . | Q | L | Y | S | T | M | L | D | H | E | K | A | V | N | Q | P | L
Template Known Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  |  | S |  |  |  |  |  |  |  | T | G | G | G
Template Predicted Secondary structure |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 118 | . | 120 | . | . |  |  | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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