16/01/2012 19:17:58 : INFO  : Run start: Mon Jan 16 19:17:57 GMT 2012
16/01/2012 19:18:06 : INFO  : Initialised job
16/01/2012 19:18:09 : INFO  : Renaming log file 'phyre2_20120116_191756.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/579a475f46b22738/phyre_20120116_191756.log'
16/01/2012 19:18:11 : INFO  : Initialised job:
Sequence
>batch____
MSLIRTETRDTKRAADPLHDLRSKPFSEWGEDEIRRFNLIDALLEFVYTDTSSPFGIGMT
FDYTECWEIGVRDDCLVMTRVKPVHPEYAKHWNMKGVMNDKTRFHADKWVGYSKVLAWVS
LSHKDTFTGAKRFQYFQTMYDMERQINANLPVGGLPNVDTERTGKLFQRDDFSEDSHAND
PKLVGDDYVPQAPEQIN

16/01/2012 19:18:13 : INFO  : Checked sequence
16/01/2012 19:18:18 : INFO  : Finding homologues with PSI-BLAST
16/01/2012 19:18:20 : INFO  : PSI-BLAST 3 iterations
16/01/2012 19:19:09 : INFO  : PSI-BLAST 5 iterations
16/01/2012 19:19:52 : INFO  : Finished PSI-BLAST
16/01/2012 19:19:58 : INFO  : Running Buildali to generate a3m file
16/01/2012 19:21:48 : INFO  : Converting to HMM
16/01/2012 19:21:50 : INFO  : Calibrating HMM
16/01/2012 19:22:05 : INFO  : Searching HMM database
16/01/2012 19:25:48 : INFO  : Finished buildali
16/01/2012 19:25:50 : INFO  : Predicting secondary structure
16/01/2012 19:26:03 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 19:26:06 : INFO  : Predicting Disordered regions
16/01/2012 19:26:13 : INFO  : Predicted Disorder (Disopred)
16/01/2012 19:26:16 : INFO  : Running memsat_svm check
16/01/2012 19:32:58 : INFO  : Globular protein
16/01/2012 19:33:01 : INFO  : Predicted Transmembrane (memsat_svm) ID '579a475f46b22738'
16/01/2012 19:33:03 : INFO  : Initialising fold library search
16/01/2012 19:33:11 : INFO  : Initialised search input
16/01/2012 19:33:14 : INFO  : Building Ensemble models
16/01/2012 19:33:20 : INFO  : Building hh.c4a1oB_.model.1.pdb
16/01/2012 19:33:43 : INFO  : Building c4a1oB_.1.pdb
16/01/2012 19:34:06 : INFO  : Building d2g39a1.2.pdb
16/01/2012 19:34:29 : INFO  : Building c2no8A_.3.pdb
16/01/2012 19:34:52 : INFO  : Building c2l95A_.4.pdb
16/01/2012 19:35:15 : INFO  : Building c3bq7A_.5.pdb
16/01/2012 19:35:39 : INFO  : Building d1iv8a2.6.pdb
16/01/2012 19:36:01 : INFO  : Building d1zo0a1.7.pdb
16/01/2012 19:36:23 : INFO  : Building d2csba4.8.pdb
16/01/2012 19:36:49 : INFO  : Building c2xqoA_.9.pdb
16/01/2012 19:37:12 : INFO  : Building c3hjeA_.10.pdb
16/01/2012 19:37:36 : INFO  : Building c1v85A_.11.pdb
16/01/2012 19:38:01 : INFO  : Building c3es5A_.12.pdb
16/01/2012 19:38:26 : INFO  : Building d1gxha_.13.pdb
16/01/2012 19:38:51 : INFO  : Building c3op0B_.14.pdb
16/01/2012 19:39:16 : INFO  : Building c2nogA_.15.pdb
16/01/2012 19:39:39 : INFO  : Building d2dlda2.16.pdb
16/01/2012 19:40:07 : INFO  : Building c3bs7A_.17.pdb
16/01/2012 19:40:30 : INFO  : Building c1l6lK_.18.pdb
16/01/2012 19:40:55 : INFO  : Building d2vlqa1.19.pdb
16/01/2012 19:41:19 : INFO  : Building d1j4aa2.20.pdb
16/01/2012 19:42:10 : INFO  : Finished HH model building
16/01/2012 19:42:13 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 19:44:46 : INFO  : html domain output complete ID '579a475f46b22738'
16/01/2012 19:53:48 : INFO  : Run end  : Mon Jan 16 19:53:46 GMT 2012
