BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (274 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria... 569 e-161 UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherich... 325 1e-87 UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobac... 223 7e-57 UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomon... 175 1e-42 UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroid... 165 2e-39 UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicr... 160 4e-38 UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=St... 155 1e-36 UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria... 154 2e-36 UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria... 152 1e-35 UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophil... 149 1e-34 UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotell... 147 3e-34 UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospir... 140 5e-32 UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=E... 137 3e-31 UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacter... 134 4e-30 UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae... 126 7e-28 UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5G... 119 1e-25 UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bactero... 118 2e-25 UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobac... 114 3e-24 UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli... 114 3e-24 UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabac... 114 3e-24 UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodicty... 105 2e-21 UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. ... 97 4e-19 UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Coryneb... 86 1e-15 UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q85... 84 5e-15 UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococc... 82 2e-14 UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella f... 78 4e-13 UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Strepto... 66 1e-09 UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bactero... 62 2e-08 UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacteri... 60 7e-08 UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta p... 60 9e-08 UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella... 49 2e-04 UniRef50_D2U308 DNA-damage-inducible protein n=1 Tax=Arsenophonu... 45 0.002 UniRef50_C9LMM5 DNA-damage-inducible protein D n=3 Tax=Clostridi... 40 0.059 >UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria RepID=DIND_ECOLI Length = 274 Score = 569 bits (1466), Expect = e-161, Method: Compositional matrix adjust. Identities = 274/274 (100%), Positives = 274/274 (100%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherichia coli IAI1 RepID=B7M4D0_ECO8A Length = 204 Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 154/154 (100%), Positives = 154/154 (100%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA 154 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA Sbjct: 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA 158 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 49/53 (92%), Positives = 50/53 (94%) Query: 222 VNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 V + QQANTTHFDVG KVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct: 152 VEAAQQANTTHFDVGSKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 204 >UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=Q60CS7_METCA Length = 295 Score = 223 bits (567), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 132/262 (50%), Positives = 171/262 (65%), Gaps = 7/262 (2%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE++K NA+GAE WSAR+L LLGYS++R F + RA +C+ SG++ + HF Sbjct: 14 FEDLKQTNAHGAEYWSARELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGKP 73 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G A + + D LSR+ACYL+ QNGDP KP IA Q YFAIQTRRQEL+D Q Sbjct: 74 ITGGKGAVQVVDDYHLSRFACYLIAQNGDPRKPEIAQAQKYFAIQTRRQELSD-----QA 128 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 D +RL LR + E K L AAQQAGV + F +F + GY+GLYGGL + AI QRK Sbjct: 129 AADLERLELRKQTAEEFKALSGAAQQAGVQSKM-FGVFHDAGYKGLYGGLGRDAIKQRKA 187 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + +LD M +TELAAN FR TQT +KL RDGV S+ QA TH VGR+VR IQ +G Sbjct: 188 IPDKDNLLDRMNATELAANQFRMTQTRDKLARDGVRSQAQAIQTHEQVGREVRAAIQRIG 247 Query: 248 GTMPEELPTPQVSIKQLENSVK 269 GT+PE++P + IK++E +K Sbjct: 248 GTLPEDIPAAE-HIKEVEKRLK 268 >UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXE8_XANC8 Length = 286 Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 92/146 (63%), Positives = 115/146 (78%) Query: 124 FKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIH 183 F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL K IH Sbjct: 131 FDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGAKDIH 190 Query: 184 QRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTI 243 RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ VR+TI Sbjct: 191 ARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTVRKTI 250 Query: 244 QELGGTMPEELPTPQVSIKQLENSVK 269 QELGGT+PE LP P+ SIK+L+ + Sbjct: 251 QELGGTLPENLPAPETSIKRLQKDAR 276 >UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K5A6_9BACE Length = 266 Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 97/248 (39%), Positives = 144/248 (58%), Gaps = 17/248 (6%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE+ K N NG W A ++ +LGY++ + F VL RA +A + H+E I+ + Sbjct: 12 FEDFK--NQNGIVYWWASEVMVMLGYNDMKAFCKVLDRATKAFVSLNIP---HYENIIAV 66 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + +N +D L+R+ACYL NGDP KP +A Q YFA QTR+ EL + + Sbjct: 67 KR--NNNGVEFQDFKLTRFACYLAAMNGDPKKPEVALAQAYFAQQTRKFEL-----YIEN 119 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 ++ R+ +R EL + NK L A+ A V TD+A FQN GY G+Y ++ + +++G Sbjct: 120 NQEIDRVLIREELADGNKSLASTAKAANV---TDYAKFQNAGYLGMYN-MESWKLEKKRG 175 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 +KK K+ D M TELAANLFR TQTEE +K ++ + TH+ VGR+VR +++ Sbjct: 176 VKKG-KLFDRMSRTELAANLFRVTQTEELIKSKQISGQANLEQTHYTVGRQVRNIVEQNT 234 Query: 248 GTMPEELP 255 G PE+LP Sbjct: 235 GRKPEQLP 242 >UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG93_9RHIZ Length = 291 Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 93/247 (37%), Positives = 132/247 (53%), Gaps = 6/247 (2%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 E+ K I+ G W AR++ ++GY +R+F L RAKEA D HF E M Sbjct: 18 LEQAKRISPKGVPYWLAREIMPIMGYQSWRNFEKTLGRAKEAFGAIHEDADKHFVETDTM 77 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + IG A+R+ KD LSR A YL+ NGDPAKP IAA Q YFA+QTRR E+ D Sbjct: 78 LLIGGGAERSGKDYFLSRPAAYLIAMNGDPAKPEIAAAQAYFAVQTRRMEIEDART---- 133 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 +DEKRL R + K++ A++AGVA T F + YQG+Y A+ + KG Sbjct: 134 -KDEKRLEGREKATVAFKKVSSVAKKAGVAN-THQPFFHDARYQGIYRATSAAAVREAKG 191 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + ++ G+ EL+ + F+ + + R+G+ + A + DV R VR TI G Sbjct: 192 IPDGANPFNYFGALELSMHEFQMNLAADVIAREGIKDETTAIQRNLDVARHVRSTIDAAG 251 Query: 248 GTMPEEL 254 GT P ++ Sbjct: 252 GTDPMKI 258 >UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=Streptococcus pneumoniae RepID=C5R1Q6_STRPN Length = 186 Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 2/153 (1%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct: 11 FENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKS 70 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F L Sbjct: 71 IPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQEL--QENFDNL 128 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATAT 160 E++KRL +R+E+K HNK L E+A+ A AT + Sbjct: 129 TEEQKRLAIRDEIKHHNKSLSESAESAENATYS 161 >UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria RepID=A1BH52_CHLPD Length = 284 Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 146/258 (56%), Gaps = 11/258 (4%) Query: 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ MV +GS ++R Sbjct: 23 GVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKMVDLGSGSQRE 82 Query: 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGD K IA QTYFAIQTRR E+ + ++L E E R+ R Sbjct: 83 VDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIE----QRLLEAE-RVSAR 137 Query: 138 NELKEHNKQLVEAA-QQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILD 196 +L K+L +Q G + +FA+ ++ G Q L+G Q A+ + + + D Sbjct: 138 KKLSATEKELSGVIFEQTG--STENFALIRSKGDQALFGKSTQ-AMKAEWNVPDKRPLAD 194 Query: 197 HMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPT 256 + L A F T + G+ S+ Q +T H + VR+T+ E G PE LP Sbjct: 195 FAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKTLLER-GIRPESLP- 252 Query: 257 PQVSIKQLENSVKITEKK 274 P +K++E + EKK Sbjct: 253 PAEDVKKVERRLASEEKK 270 >UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria RepID=C6CR17_DICZE Length = 289 Score = 152 bits (384), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 94/261 (36%), Positives = 137/261 (52%), Gaps = 8/261 (3%) Query: 14 INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSN 73 I G E W AR L + LGY+ + +F + RA E+C+ +G+ DHF + MVKIGS Sbjct: 20 IPEEGVEFWFARDLMEPLGYARWENFQTAIGRAVESCKTTGYDESDHFRGVTKMVKIGSG 79 Query: 74 AKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR 133 A RA++D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL +D Q R D Sbjct: 80 ADRAVEDFMLTRYACYLIAQNGDPRKEAIAFAQSYFAIQTRKQELIEDRMRLQARLD--- 136 Query: 134 LFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQK 193 R L+E K L + + GV F ++ G L+GG + + R G+ + + Sbjct: 137 --ARERLRESEKTLSQNLYERGV-DDKGFGRIRSRGDAALFGGNTTQMMKDRYGITQARP 193 Query: 194 ILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 + D + + +AA T + + ++ + H VR + + G PE+ Sbjct: 194 LADFLPTLTIAAKNLATEMTNHNVMQGQLHGEPSITREHEQNNLSVRDMLGQR-GIKPEQ 252 Query: 254 LPTPQVSIKQLENSVKITEKK 274 LP + IK+LE VK EKK Sbjct: 253 LPAEE-DIKKLERRVKTEEKK 272 >UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophilus influenzae RepID=C9MEB1_HAEIN Length = 281 Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 87/259 (33%), Positives = 138/259 (53%), Gaps = 20/259 (7%) Query: 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A L +LGY++ + + + +A C N I D+F I + + Sbjct: 31 NGITYWYASDLAMMLGYNDMQAILKAMNKAYAVCNNLNIPIADNF--------IQTQSPN 82 Query: 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD-EAFKQLREDEKRLF 135 D ++R+ACYL V NG+ + P +AA Q YFA +LAD+ Q E+ R++ Sbjct: 83 TPSDFKMTRFACYLTVMNGNISNPKVAAAQAYFA------KLADEIHTLCQSAEEVDRVY 136 Query: 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQ-KI 194 LR ++ + K L A + GV ++A FQN GY+G+Y ++ K++ +KGL ++ + Sbjct: 137 LRGDISDREKSLSHIAHKHGV---ENYAFFQNAGYRGMYN-MNIKSLKNKKGLFDDKASL 192 Query: 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 LD M + ELAAN+FR TQTE K++ + ++ VGR VR + GT PE+L Sbjct: 193 LDFMDNEELAANIFRVTQTEAKIRNQNIKGQKNLENAAETVGRSVRNVMISNTGTAPEDL 252 Query: 255 PTPQVSIKQLENSVKITEK 273 Q I ++++S+K T K Sbjct: 253 ALSQEKINKIQSSIKKTHK 271 >UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotella oris F0302 RepID=D1QN57_9BACT Length = 308 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 8/255 (3%) Query: 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +LGY+ + +F+ + RA +C++ +DDHF E+ MV +GS AKR + Sbjct: 49 EVWFARELQTILGYARWENFLVAIHRAVASCKSQDINVDDHFREVTKMVDLGSGAKREVS 108 Query: 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ EL +E L RL R++ Sbjct: 109 DFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAELI-EERLNLL----SRLETRDK 163 Query: 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMG 199 L+ KQL + + GV F ++ G L+GG + + +R G+K N+ + D + Sbjct: 164 LRAAEKQLSQNIYERGVDDK-GFGRIRSKGDTALFGGHTTEDMKKRLGVKSNRPLADFLP 222 Query: 200 STELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQV 259 + +AA T ++ + + H + VR + G PEELP + Sbjct: 223 TLTIAAKNLATEMTNYNVENKDLYGEPSITREHIQNNQSVRAMLGN-RGIKPEELPAAE- 280 Query: 260 SIKQLENSVKITEKK 274 IK+LE V EKK Sbjct: 281 DIKKLERKVTRDEKK 295 >UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B333_SULD5 Length = 269 Score = 140 bits (353), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 90/260 (34%), Positives = 136/260 (52%), Gaps = 28/260 (10%) Query: 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A +L +LGY+EY+ F+ + +A C + I HF + + +N Sbjct: 24 NGIRYWLASELANMLGYTEYKTFLKSINKAMTVCTSLNMQIISHF------IPLANN--- 74 Query: 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEK--RL 134 D L+R+AC+L+ N D K +A Q YFA LAD A +L + E+ R+ Sbjct: 75 ---DFKLTRFACFLITMNADIKKEKVAKAQIYFA------SLAD--AISELMQAEQIERI 123 Query: 135 FLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKI 194 +R EL NK L A AGV ++A+F N GY G+Y + + + KG++ K Sbjct: 124 EIREELTNKNKSLAATANMAGV---ENYALFNNAGYMGMYN-MSFNDLKKVKGIEGTTKS 179 Query: 195 -LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEE 253 LD MG ELAANLFR ++TE K+K D + ++ T +VG+KVR + + G PE Sbjct: 180 PLDFMGKRELAANLFRISETEAKIKSDHIYGQKNLENTAKEVGKKVRNIMIDNDGVRPEM 239 Query: 254 LPTPQVSIKQLENSVKITEK 273 L QV++ ++ ++K EK Sbjct: 240 LA-RQVALSDVKKNIKKVEK 258 >UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=Escherichia coli RepID=B7UN88_ECO27 Length = 280 Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 129/258 (50%), Gaps = 18/258 (6%) Query: 17 NGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKR 76 NG W A L +LGY+ + + +A C + + D+F I ++ Sbjct: 30 NGVTYWFASDLAMMLGYNGMDQILKAINKATSVCVSLDIPVYDNF--------IQMPSEN 81 Query: 77 ALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFL 136 A D L+R+ACYL+V NGD + +A Q YFA A+ + R++L Sbjct: 82 AKNDFKLTRFACYLIVMNGDISNQKVANAQAYFA-----GLAAEIHTTYHNHDAVNRVYL 136 Query: 137 RNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGL-KKNQKIL 195 R E+ K L A + GV D+ +FQN GY+G+Y ++ + RKGL KK+ +L Sbjct: 137 RGEITSREKTLSHVAHKHGV---VDYGLFQNAGYRGMYN-MNLSQLKARKGLTKKDGTML 192 Query: 196 DHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 D MGS ELAAN+FR TQTE +++ + + Q VGR VR + GT PE + Sbjct: 193 DFMGSEELAANIFRITQTEARIRNQNLKGQSQLENAAETVGRSVRNVMISNTGTAPENIK 252 Query: 256 TPQVSIKQLENSVKITEK 273 Q I+++ +S+K T K Sbjct: 253 LSQEKIQKVRSSIKKTHK 270 >UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacteria RepID=Q3ARJ2_CHLCH Length = 412 Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 61/108 (56%), Positives = 76/108 (70%) Query: 3 EHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFE 62 +H FE+I+ + NG E WSAR L K+L YSE+RHF+PV+ R KEAC NSG I DHFE Sbjct: 8 QHIGLFEKIRQTDENGNEFWSARDLSKVLEYSEFRHFLPVIERGKEACINSGQQIADHFE 67 Query: 63 EILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFA 110 +IL+M+ R ++ I LSRYACYL+VQN D K V+A GQTYFA Sbjct: 68 DILEMITTDKTEHREIEGIKLSRYACYLIVQNADHGKEVVALGQTYFA 115 >UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9A6_9BACT Length = 116 Score = 126 bits (317), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 54/99 (54%), Positives = 78/99 (78%), Gaps = 5/99 (5%) Query: 48 EACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQT 107 ++C NSG ++DHF E+ DMV IGS A+R LK +++SRYACYLV+QN DPAK ++A GQT Sbjct: 10 QSCFNSGQRVEDHFVEVTDMVGIGSGARRPLKTVMMSRYACYLVIQNADPAKEIVAQGQT 69 Query: 108 YFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQ 146 YFA+QTRRQEL+D++ E+++RL +R++L+ HN + Sbjct: 70 YFALQTRRQELSDEQV-----EEQRRLAIRSDLRRHNSR 103 >UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5GKB1_9ACTO Length = 337 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/117 (51%), Positives = 72/117 (61%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ + A+GA+ WSAR L +LLGY + F + RA ACENSGH DHF Sbjct: 65 PFDATRNTRADGADFWSARDLQELLGYERWERFETAVERAIAACENSGHEPKDHFRGAAK 124 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 V +GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A A Sbjct: 125 KVSLGSGATRAVIDWHLSRYAAYLVAMNGDPRKDQIAAAQTYFAVKTREAEIAATRA 181 >UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V0H9_BACUN Length = 223 Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 70/201 (34%), Positives = 110/201 (54%), Gaps = 7/201 (3%) Query: 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E WSAR+L +LGY++++ F VL +AKEAC+N+G +HF I + + A + Sbjct: 23 GVECWSARELYPILGYAKWQTFENVLGKAKEACQNAGVETSNHFTGISKTILMPKGASKD 82 Query: 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 ++D +L+RYACYLV QNGDP K IA Q YFA+QTR E+ + D R+ R Sbjct: 83 IEDFMLTRYACYLVAQNGDPRKSEIAFAQNYFAVQTRVAEVIEQRLL-----DYDRVQAR 137 Query: 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 ++L E K+L + GV F I ++ G Q L+ ++ + ++ G + + + D Sbjct: 138 HKLAETEKRLSGVLYERGV-DDKGFGIIRSKGDQALF-RMNTAMLKRKLGAPEKRALADF 195 Query: 198 MGSTELAANLFRATQTEEKLK 218 + + + A F A T L+ Sbjct: 196 LPTLGIKAKDFAAEMTSSVLR 216 >UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=C3X7Y6_OXAFO Length = 249 Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 75/227 (33%), Positives = 120/227 (52%), Gaps = 14/227 (6%) Query: 31 LGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYL 90 LGY + F V+ R+ AC + + ++F E+ K + K + L+R+AC+L Sbjct: 4 LGYDSWTSFNRVVNRSISACASLNVPVMENFMEM----KYRFDGK-DVSTYKLTRFACFL 58 Query: 91 VVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDE-KRLFLRNELKEHNKQLVE 149 + N D KP + +T A +AD + + D +R+ +RNELK+ + L Sbjct: 59 ITMNADSRKPEVLQAKTVLA------GIADALVEQAIHHDSVERIEVRNELKDGERFLSG 112 Query: 150 AAQQAGVATATDFAIFQNHGYQGLYG-GLDQKAIHQRKGLKKNQKILDHMGSTELAANLF 208 A AG+ + +F IF++ GY+GLY L+ ++ ++KN+ + D MG +ELAANLF Sbjct: 113 VAMSAGLQS-REFGIFRDAGYRGLYNMSLNDLIRYKGMTIEKNKTLYDFMGKSELAANLF 171 Query: 209 RATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELP 255 R TQT E++K + V + + T VG +VR + GG PE LP Sbjct: 172 RVTQTTERIKNNNVKGLKNLSQTAKSVGTEVRNVMLRSGGLEPENLP 218 >UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli n=3 Tax=Bifidobacterium longum RepID=Q8G7T6_BIFLO Length = 187 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 85/150 (56%), Gaps = 5/150 (3%) Query: 20 EQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALK 79 E W AR+L +GY + +F +TRAK+AC+NSG +++ HF + V +GS A R++ Sbjct: 26 EYWYARELMTYMGYDRWENFSKAITRAKQACDNSGVSVESHFRDTTRDVTLGSGATRSIA 85 Query: 80 DIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLRNE 139 D+ L+RYACYL+ QNGDP K +A Q+YFA+QTR+ E+ +Q + RL R Sbjct: 86 DVKLTRYACYLIAQNGDPKKEEVALLQSYFAVQTRKTEI-----IEQRMGEISRLAGREA 140 Query: 140 LKEHNKQLVEAAQQAGVATATDFAIFQNHG 169 L K+L Q TA + NH Sbjct: 141 LATAEKKLYPYTQITHNKTAQEHMYTPNHA 170 >UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LGB1_PARD8 Length = 168 Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/112 (48%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEILD 66 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ Sbjct: 13 FESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDVGK 71 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQEL 118 MV IG ++ + DI+L+RYACYL+ QNGD K +A QTYFA+QTR+ E+ Sbjct: 72 MVSIGYGVEKQIDDILLTRYACYLIAQNGDSRKLQVAFAQTYFAVQTRKAEV 123 >UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SF56_PELPB Length = 241 Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 119/258 (46%), Gaps = 54/258 (20%) Query: 18 GAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRA 77 G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ +++ A + Sbjct: 23 GVEYWLARDLQYLLGYSKWDNFVGVVSKAKTACELSGHKVSDHFADVGKTIQMPKGATKE 82 Query: 78 LKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLFLR 137 + DI+L+RYACYL+ QNGD +R+QE+ AF Q Sbjct: 83 VPDIMLTRYACYLIAQNGD----------------SRKQEI----AFAQ----------- 111 Query: 138 NELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDH 197 +A +FA+ ++ G Q L+G Q A+ + + + D Sbjct: 112 ------------------TGSAENFAVIRSKGDQVLFGKSTQ-AMKAEWNVPDKRPLADF 152 Query: 198 MGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG-GTMPEELPT 256 + L A F T + G+ S+ + H + VR T+ LG G PE LP Sbjct: 153 APTIILKAKDFATEITIFNAREHGMKSEGGISNEHITNNKAVRNTL--LGRGICPESLP- 209 Query: 257 PQVSIKQLENSVKITEKK 274 P +K++E + EK+ Sbjct: 210 PAEDVKKVERRLASEEKQ 227 >UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YL03_ANASP Length = 266 Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 54/125 (43%), Positives = 69/125 (55%), Gaps = 6/125 (4%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++I+ I+ +G E W AR L +LGY ++R + RA AC+N G ++HF L Sbjct: 14 PFDQIRKIDDDGTEYWLARDLMPILGYQQWRRLEDAINRAIAACKNIGQESENHF---LP 70 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA--DDEAF 124 M S R D LSR+ CYL NGD KP IAA Q YFA++TR ELA E Sbjct: 71 M-PAKSTGGRPGDDFKLSRHGCYLTAMNGDSRKPEIAAAQNYFAVKTREAELAPQSQELL 129 Query: 125 KQLRE 129 QL E Sbjct: 130 SQLLE 134 >UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKK6_CORK4 Length = 263 Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 6/111 (5%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++IK +G E WSAR L L+GY+ + F + RA+ + +NSG F I + Sbjct: 14 PFDQIKRAREDGTEYWSARDLMPLMGYARWEDFYKITRRAEASAKNSGQ---GGFSVITE 70 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 G R D L+R A YLV NGDP KP +AA Q+YFA++TR E Sbjct: 71 KAPEGG---RPRTDFHLNRLAAYLVAMNGDPNKPEVAAAQSYFALRTREAE 118 >UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q855G1_9CAUD Length = 288 Score = 84.0 bits (206), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 48/143 (33%), Positives = 77/143 (53%), Gaps = 8/143 (5%) Query: 7 PFEEIKLINANGAE-QWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ ++ G E +WSAR L + +GYS ++ F P++ RAK A + G + F + + Sbjct: 12 PFDAGRIPCPQGGEDRWSARWLMEQMGYSSWQKFEPIIERAKTAAASEGFNVRTLFTQTV 71 Query: 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 K G R D ++R+A YL+ NG P+KP +AA QTYFA++TR+ E+ A Sbjct: 72 K--KTGG---RPETDYHVTRFAAYLIAMNGQPSKPEVAAAQTYFAVKTRQAEV--QPAIP 124 Query: 126 QLREDEKRLFLRNELKEHNKQLV 148 + E L + + ++LV Sbjct: 125 DITTPEGLLAMTEMFADTARKLV 147 >UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococcus elongatus RepID=Q31Q71_SYNE7 Length = 215 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 44/118 (37%), Positives = 61/118 (51%), Gaps = 4/118 (3%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + NG E W+ R+L L Y ++HF + RA +C+ G + DHF + Sbjct: 4 PFDSIRHVE-NGQEFWNGRELMGFLDYPHWQHFTNAIDRAIISCQRRGKHVADHFSRTIT 62 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 K G R +D LSR A YLV N DP K +AA Q YF ++ R E D +A Sbjct: 63 KFKTGG---RPREDYRLSRLAAYLVAMNSDPRKRSVAAAQEYFYLRIRESEERDQKAL 117 >UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella fastidiosa RepID=Q87CK5_XYLFT Length = 186 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 20/168 (11%) Query: 76 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFA------IQTRRQELADDEAFKQLRE 129 +A+K LSR+AC LV D KP +A +T A I+ R Q E Sbjct: 25 KAIKTYQLSRFACLLVSMTADSKKPEVARAKTILAAIANTLIEQRIQS-----------E 73 Query: 130 DEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLK 189 D RL R +LK K + AA+ G+ A +F IF++ G++G+Y + + + K L Sbjct: 74 DLARLETREDLKFGEKAMTSAAKDGGLQNA-EFGIFKDAGFRGMYN-MSLRELQHYKRLP 131 Query: 190 KNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGR 237 + + D MG ELA NLFR TQT +++ V + H GR Sbjct: 132 NGKTLYDFMGLEELAGNLFRVTQTAARIRNKDV-IRTTTTLKHCPTGR 178 >UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WWQ4_9ACTO Length = 306 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 3/119 (2%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + +G E WSAR+L LLGY ++ F + +A+ E ++ E L Sbjct: 16 PFDSIRRLREDGVEYWSARELMPLLGYKKWERFADAVEQARSVIEAENGSLAAEQEASLQ 75 Query: 67 MVKIGSNAKRALKD-IVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 G R + D LSR A YL GD KP I A YFA +TR EL F Sbjct: 76 REAFGRT--RQIGDNYWLSRRASYLTAMRGDSRKPEIRAALIYFANRTREAELGHASQF 132 >UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6YZL5_9BACE Length = 85 Score = 61.6 bits (148), Expect = 2e-08, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 HF ++ MV +GS A+R + DI +RYACYL QNGD KP IA Q Y+ + R Sbjct: 4 HFADVSKMVSVGSGAEREIDDIYFTRYACYLTAQNGDARKPAIAFAQNYYDGKPR 58 >UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZC8_9FIRM Length = 135 Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 38/56 (67%), Gaps = 1/56 (1%) Query: 49 ACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAA 104 AC SGH + F E+ +V G+ +K ++KD L+RYACYL+VQNGDP K V +A Sbjct: 38 ACATSGHEVTSDFAEVGKIVDAGATSK-SIKDYELTRYACYLIVQNGDPRKEVRSA 92 Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 26/32 (81%) Query: 234 DVGRKVRQTIQELGGTMPEELPTPQVSIKQLE 265 D ++VR I+++GGTMPE+LP P+ SI+Q+E Sbjct: 84 DPRKEVRSAIEKIGGTMPEDLPVPEKSIQQIE 115 >UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV0_9DELT Length = 189 Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 38/62 (61%) Query: 19 AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRAL 78 E W AR L LGY+ + +F+ + RA E+CE +G+ DDHF + M++IG + + + Sbjct: 25 VEFWFARDLMAPLGYARWENFLTAIKRAIESCETTGYKADDHFRGVTKMIEIGGHTTQVM 84 Query: 79 KD 80 KD Sbjct: 85 KD 86 >UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella fastidiosa RepID=Q3R926_XYLFA Length = 107 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/87 (37%), Positives = 44/87 (50%), Gaps = 9/87 (10%) Query: 22 WSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF--EEILDMVKIGSNAKRALK 79 W A QL + LGY ++ F V+T+A AC G + F EEI V+ G +A+K Sbjct: 21 WYAHQLMQWLGYESWQAFQNVITKAMGACSRLGLDPTEAFVREEI---VQDG----KAIK 73 Query: 80 DIVLSRYACYLVVQNGDPAKPVIAAGQ 106 LSR+AC LV D KP G+ Sbjct: 74 TYQLSRFACLLVSMTADSKKPNSGLGE 100 >UniRef50_D2U308 DNA-damage-inducible protein n=1 Tax=Arsenophonus nasoniae RepID=D2U308_9ENTR Length = 87 Score = 45.1 bits (105), Expect = 0.002, Method: Composition-based stats. Identities = 18/33 (54%), Positives = 26/33 (78%) Query: 54 GHTIDDHFEEILDMVKIGSNAKRALKDIVLSRY 86 GH ++DH E+ILDMV IGS+ +R LK ++L+ Y Sbjct: 8 GHNLEDHLEDILDMVNIGSSVQRKLKRVILTCY 40 >UniRef50_C9LMM5 DNA-damage-inducible protein D n=3 Tax=Clostridiales RepID=C9LMM5_9FIRM Length = 60 Score = 40.4 bits (93), Expect = 0.059, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQ 244 L K QKI + EL+ANLFR TEEKL R G ++A H+ V ++ R I+ Sbjct: 4 LTKLQKIKGFYKNKELSANLFRIPPTEEKL-RKGKAEGEEATKFHYSVAKEFRSVIE 59 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria... 379 e-104 UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria... 314 2e-84 UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria... 313 3e-84 UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotell... 307 3e-82 UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobac... 301 1e-80 UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=E... 292 9e-78 UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophil... 286 5e-76 UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicr... 274 2e-72 UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroid... 269 6e-71 UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodicty... 262 1e-68 UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospir... 253 5e-66 UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bactero... 252 1e-65 UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobac... 246 5e-64 UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherich... 221 2e-56 UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=St... 200 4e-50 UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli... 187 4e-46 UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5G... 176 6e-43 UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabac... 172 1e-41 UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. ... 165 2e-39 UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacter... 163 7e-39 UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella f... 162 1e-38 UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q85... 159 7e-38 UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomon... 159 1e-37 UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Coryneb... 153 4e-36 UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococc... 151 2e-35 UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Strepto... 144 4e-33 UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae... 118 2e-25 UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta p... 111 3e-23 UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella... 103 6e-21 UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bactero... 84 6e-15 UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacteri... 83 1e-14 Sequences not found previously or not previously below threshold: UniRef50_B0VG66 Putative uncharacterized protein n=1 Tax=Candida... 57 7e-07 UniRef50_A1WQG7 Putative uncharacterized protein n=1 Tax=Vermine... 56 1e-06 UniRef50_C1D093 Putative uncharacterized protein n=1 Tax=Deinoco... 42 0.020 UniRef50_C7M988 Phage antirepressor protein n=1 Tax=Capnocytopha... 41 0.068 >UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria RepID=DIND_ECOLI Length = 274 Score = 379 bits (973), Expect = e-104, Method: Composition-based stats. Identities = 274/274 (100%), Positives = 274/274 (100%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria RepID=A1BH52_CHLPD Length = 284 Score = 314 bits (805), Expect = 2e-84, Method: Composition-based stats. Identities = 96/267 (35%), Positives = 143/267 (53%), Gaps = 9/267 (3%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ M Sbjct: 13 FEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVGKM 72 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 V +GS ++R + DI+L+RYACYL+ QNGD K IA QTYFAIQTRR E+ + Sbjct: 73 VDLGSGSQREVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIEQRLL--- 129 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 + +R+ R +L K+L + + +FA+ ++ G Q L+G Q A+ Sbjct: 130 --EAERVSARKKLSATEKELSGVIFEQ-TGSTENFALIRSKGDQALFGKSTQ-AMKAEWN 185 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + + + D + L A F T + G+ S+ Q +T H + VR+T+ E Sbjct: 186 VPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKTLLER- 244 Query: 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 G PE LP P +K++E + EKK Sbjct: 245 GIRPESLP-PAEDVKKVERRLASEEKK 270 >UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria RepID=C6CR17_DICZE Length = 289 Score = 313 bits (802), Expect = 3e-84, Method: Composition-based stats. Identities = 95/268 (35%), Positives = 140/268 (52%), Gaps = 9/268 (3%) Query: 8 FEEIKL-INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F+ + I G E W AR L + LGY+ + +F + RA E+C+ +G+ DHF + Sbjct: 13 FDNLSHTIPEEGVEFWFARDLMEPLGYARWENFQTAIGRAVESCKTTGYDESDHFRGVTK 72 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 MVKIGS A RA++D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL +D Q Sbjct: 73 MVKIGSGADRAVEDFMLTRYACYLIAQNGDPRKEAIAFAQSYFAIQTRKQELIEDRMRLQ 132 Query: 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 RL R L+E K L + + GV F ++ G L+GG + + R Sbjct: 133 A-----RLDARERLRESEKTLSQNLYERGV-DDKGFGRIRSRGDAALFGGNTTQMMKDRY 186 Query: 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 G+ + + + D + + +AA T + + ++ + H VR + + Sbjct: 187 GITQARPLADFLPTLTIAAKNLATEMTNHNVMQGQLHGEPSITREHEQNNLSVRDMLGQR 246 Query: 247 GGTMPEELPTPQVSIKQLENSVKITEKK 274 G PE+LP + IK+LE VK EKK Sbjct: 247 -GIKPEQLPA-EEDIKKLERRVKTEEKK 272 >UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotella oris F0302 RepID=D1QN57_9BACT Length = 308 Score = 307 bits (786), Expect = 3e-82, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 13/277 (4%) Query: 3 EHHQPFEEI-KLINANG----AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTI 57 ++ F+ I + I ++ E W AR+L +LGY+ + +F+ + RA +C++ + Sbjct: 27 QYKSTFDGIVRHIESDDAKDQIEVWFARELQTILGYARWENFLVAIHRAVASCKSQDINV 86 Query: 58 DDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 DDHF E+ MV +GS AKR + D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ E Sbjct: 87 DDHFREVTKMVDLGSGAKREVSDFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAE 146 Query: 118 LADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGL 177 L ++ RL R++L+ KQL + + GV F ++ G L+GG Sbjct: 147 LIEERLNL-----LSRLETRDKLRAAEKQLSQNIYERGV-DDKGFGRIRSKGDTALFGGH 200 Query: 178 DQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGR 237 + + +R G+K N+ + D + + +AA T ++ + + H + Sbjct: 201 TTEDMKKRLGVKSNRPLADFLPTLTIAAKNLATEMTNYNVENKDLYGEPSITREHIQNNQ 260 Query: 238 KVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 VR + G PEELP + IK+LE V EKK Sbjct: 261 SVRAMLG-NRGIKPEELPAAE-DIKKLERKVTRDEKK 295 >UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=Q60CS7_METCA Length = 295 Score = 301 bits (771), Expect = 1e-80, Method: Composition-based stats. Identities = 132/263 (50%), Positives = 171/263 (65%), Gaps = 7/263 (2%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE++K NA+GAE WSAR+L LLGYS++R F + RA +C+ SG++ + HF Sbjct: 14 FEDLKQTNAHGAEYWSARELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGKP 73 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G A + + D LSR+ACYL+ QNGDP KP IA Q YFAIQTRRQEL+D Q Sbjct: 74 ITGGKGAVQVVDDYHLSRFACYLIAQNGDPRKPEIAQAQKYFAIQTRRQELSD-----QA 128 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 D +RL LR + E K L AAQQAGV + F +F + GY+GLYGGL + AI QRK Sbjct: 129 AADLERLELRKQTAEEFKALSGAAQQAGVQSKM-FGVFHDAGYKGLYGGLGRDAIKQRKA 187 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + +LD M +TELAAN FR TQT +KL RDGV S+ QA TH VGR+VR IQ +G Sbjct: 188 IPDKDNLLDRMNATELAANQFRMTQTRDKLARDGVRSQAQAIQTHEQVGREVRAAIQRIG 247 Query: 248 GTMPEELPTPQVSIKQLENSVKI 270 GT+PE++P + IK++E +K Sbjct: 248 GTLPEDIPAAE-HIKEVEKRLKS 269 >UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=Escherichia coli RepID=B7UN88_ECO27 Length = 280 Score = 292 bits (747), Expect = 9e-78, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 24/280 (8%) Query: 1 MNEHHQPFEEIKLI------NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSG 54 M+ F++ + NG W A L +LGY+ + + +A C + Sbjct: 8 MSRQITVFDDTSQLTFDDFARENGVTYWFASDLAMMLGYNGMDQILKAINKATSVCVSLD 67 Query: 55 HTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 + D+F I ++ A D L+R+ACYL+V NGD + +A Q YFA Sbjct: 68 IPVYDNF--------IQMPSENAKNDFKLTRFACYLIVMNGDISNQKVANAQAYFA---- 115 Query: 115 RQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLY 174 A+ + R++LR E+ K L A + GV D+ +FQN GY+G+Y Sbjct: 116 -GLAAEIHTTYHNHDAVNRVYLRGEITSREKTLSHVAHKHGV---VDYGLFQNAGYRGMY 171 Query: 175 GGLDQKAIHQRKGL-KKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHF 233 ++ + RKGL KK+ +LD MGS ELAAN+FR TQTE +++ + + Q Sbjct: 172 N-MNLSQLKARKGLTKKDGTMLDFMGSEELAANIFRITQTEARIRNQNLKGQSQLENAAE 230 Query: 234 DVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEK 273 VGR VR + GT PE + Q I+++ +S+K T K Sbjct: 231 TVGRSVRNVMISNTGTAPENIKLSQEKIQKVRSSIKKTHK 270 >UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophilus influenzae RepID=C9MEB1_HAEIN Length = 281 Score = 286 bits (732), Expect = 5e-76, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 141/268 (52%), Gaps = 22/268 (8%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 F++ NG W A L +LGY++ + + + +A C N I D+F Sbjct: 24 FDDF--AKQNGITYWYASDLAMMLGYNDMQAILKAMNKAYAVCNNLNIPIADNF------ 75 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD-EAFKQ 126 I + + D ++R+ACYL V NG+ + P +AA Q YFA +LAD+ Q Sbjct: 76 --IQTQSPNTPSDFKMTRFACYLTVMNGNISNPKVAAAQAYFA------KLADEIHTLCQ 127 Query: 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 E+ R++LR ++ + K L A + GV ++A FQN GY+G+Y ++ K++ +K Sbjct: 128 SAEEVDRVYLRGDISDREKSLSHIAHKHGV---ENYAFFQNAGYRGMYN-MNIKSLKNKK 183 Query: 187 GLKKNQ-KILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 GL ++ +LD M + ELAAN+FR TQTE K++ + ++ VGR VR + Sbjct: 184 GLFDDKASLLDFMDNEELAANIFRVTQTEAKIRNQNIKGQKNLENAAETVGRSVRNVMIS 243 Query: 246 LGGTMPEELPTPQVSIKQLENSVKITEK 273 GT PE+L Q I ++++S+K T K Sbjct: 244 NTGTAPEDLALSQEKINKIQSSIKKTHK 271 >UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG93_9RHIZ Length = 291 Score = 274 bits (701), Expect = 2e-72, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 138/261 (52%), Gaps = 7/261 (2%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 E+ K I+ G W AR++ ++GY +R+F L RAKEA D HF E M Sbjct: 18 LEQAKRISPKGVPYWLAREIMPIMGYQSWRNFEKTLGRAKEAFGAIHEDADKHFVETDTM 77 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + IG A+R+ KD LSR A YL+ NGDPAKP IAA Q YFA+QTRR E+ D Sbjct: 78 LLIGGGAERSGKDYFLSRPAAYLIAMNGDPAKPEIAAAQAYFAVQTRRMEIEDART---- 133 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 +DEKRL R + K++ A++AGVA T F + YQG+Y A+ + KG Sbjct: 134 -KDEKRLEGREKATVAFKKVSSVAKKAGVAN-THQPFFHDARYQGIYRATSAAAVREAKG 191 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + ++ G+ EL+ + F+ + + R+G+ + A + DV R VR TI G Sbjct: 192 IPDGANPFNYFGALELSMHEFQMNLAADVIAREGIKDETTAIQRNLDVARHVRSTIDAAG 251 Query: 248 GTMPEELPTPQVSIKQLENSV 268 GT P ++ + I +++ + Sbjct: 252 GTDPMKIEIAEP-IDEVKKRL 271 >UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K5A6_9BACE Length = 266 Score = 269 bits (688), Expect = 6e-71, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 19/275 (6%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N FE+ K N NG W A ++ +LGY++ + F VL RA +A + H+ Sbjct: 6 NNAILSFEDFK--NQNGIVYWWASEVMVMLGYNDMKAFCKVLDRATKAFVSLNIP---HY 60 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 E I+ + + +N +D L+R+ACYL NGDP KP +A Q YFA QTR+ EL Sbjct: 61 ENIIAVKR--NNNGVEFQDFKLTRFACYLAAMNGDPKKPEVALAQAYFAQQTRKFEL--- 115 Query: 122 EAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKA 181 + + ++ R+ +R EL + NK L A+ A V TD+A FQN GY G+Y ++ Sbjct: 116 --YIENNQEIDRVLIREELADGNKSLASTAKAANV---TDYAKFQNAGYLGMYN-MESWK 169 Query: 182 IHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQ 241 + +++G+KK + + D M TELAANLFR TQTEE +K ++ + TH+ VGR+VR Sbjct: 170 LEKKRGVKKGK-LFDRMSRTELAANLFRVTQTEELIKSKQISGQANLEQTHYTVGRQVRN 228 Query: 242 TIQELGGTMPEELPTPQV--SIKQLENSVKITEKK 274 +++ G PE+LP + IK+ KK Sbjct: 229 IVEQNTGRKPEQLPQEKELPIIKKALKMTAKEMKK 263 >UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SF56_PELPB Length = 241 Score = 262 bits (668), Expect = 1e-68, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 115/267 (43%), Gaps = 52/267 (19%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ Sbjct: 13 FEAHARKVEGGVEYWLARDLQYLLGYSKWDNFVGVVSKAKTACELSGHKVSDHFADVGKT 72 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 +++ A + + DI+L+RYACYL+ QNGD K IA QT Sbjct: 73 IQMPKGATKEVPDIMLTRYACYLIAQNGDSRKQEIAFAQT-------------------- 112 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 +A +FA+ ++ G Q L+G Q A+ Sbjct: 113 -----------------------------GSAENFAVIRSKGDQVLFGKSTQ-AMKAEWN 142 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + + + D + L A F T + G+ S+ + H + VR T+ Sbjct: 143 VPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGGISNEHITNNKAVRNTLLGR- 201 Query: 248 GTMPEELPTPQVSIKQLENSVKITEKK 274 G PE LP P +K++E + EK+ Sbjct: 202 GICPESLP-PAEDVKKVERRLASEEKQ 227 >UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B333_SULD5 Length = 269 Score = 253 bits (646), Expect = 5e-66, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 133/259 (51%), Gaps = 24/259 (9%) Query: 16 ANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAK 75 NG W A +L +LGY+EY+ F+ + +A C + I HF + + +N Sbjct: 23 QNGIRYWLASELANMLGYTEYKTFLKSINKAMTVCTSLNMQIISHF------IPLANN-- 74 Query: 76 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLF 135 D L+R+AC+L+ N D K +A Q YFA LAD + E +R+ Sbjct: 75 ----DFKLTRFACFLITMNADIKKEKVAKAQIYFA------SLADAISELMQAEQIERIE 124 Query: 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKN-QKI 194 +R EL NK L A AGV ++A+F N GY G+Y + + + KG++ + Sbjct: 125 IREELTNKNKSLAATANMAGV---ENYALFNNAGYMGMYN-MSFNDLKKVKGIEGTTKSP 180 Query: 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 LD MG ELAANLFR ++TE K+K D + ++ T +VG+KVR + + G PE L Sbjct: 181 LDFMGKRELAANLFRISETEAKIKSDHIYGQKNLENTAKEVGKKVRNIMIDNDGVRPEML 240 Query: 255 PTPQVSIKQLENSVKITEK 273 QV++ ++ ++K EK Sbjct: 241 -ARQVALSDVKKNIKKVEK 258 >UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V0H9_BACUN Length = 223 Score = 252 bits (642), Expect = 1e-65, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I G E WSAR+L +LGY++++ F VL +AKEAC+N+G +HF I Sbjct: 14 FESIAC-EYEGVECWSARELYPILGYAKWQTFENVLGKAKEACQNAGVETSNHFTGISKT 72 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + + A + ++D +L+RYACYLV QNGDP K IA Q YFA+QTR E+ + Sbjct: 73 ILMPKGASKDIEDFMLTRYACYLVAQNGDPRKSEIAFAQNYFAVQTRVAEVIEQRLL--- 129 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 D R+ R++L E K+L + GV F I ++ G Q L+ ++ + ++ G Sbjct: 130 --DYDRVQARHKLAETEKRLSGVLYERGV-DDKGFGIIRSKGDQALFR-MNTAMLKRKLG 185 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLK 218 + + + D + + + A F A T L+ Sbjct: 186 APEKRALADFLPTLGIKAKDFAAEMTSSVLR 216 >UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=C3X7Y6_OXAFO Length = 249 Score = 246 bits (628), Expect = 5e-64, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 128/249 (51%), Gaps = 15/249 (6%) Query: 28 GKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYA 87 + LGY + F V+ R+ AC + + ++F E+ + + L+R+A Sbjct: 1 MQKLGYDSWTSFNRVVNRSISACASLNVPVMENFMEMKYRFD-----GKDVSTYKLTRFA 55 Query: 88 CYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLRED-EKRLFLRNELKEHNKQ 146 C+L+ N D KP + +T A +AD + + D +R+ +RNELK+ + Sbjct: 56 CFLITMNADSRKPEVLQAKTVLAG------IADALVEQAIHHDSVERIEVRNELKDGERF 109 Query: 147 LVEAAQQAGVATATDFAIFQNHGYQGLYG-GLDQKAIHQRKGLKKNQKILDHMGSTELAA 205 L A AG+ + +F IF++ GY+GLY L+ ++ ++KN+ + D MG +ELAA Sbjct: 110 LSGVAMSAGLQS-REFGIFRDAGYRGLYNMSLNDLIRYKGMTIEKNKTLYDFMGKSELAA 168 Query: 206 NLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLE 265 NLFR TQT E++K + V + + T VG +VR + GG PE LP + +I ++ Sbjct: 169 NLFRVTQTTERIKNNNVKGLKNLSQTAKSVGTEVRNVMLRSGGLEPENLPL-EENINDVK 227 Query: 266 NSVKITEKK 274 +K K+ Sbjct: 228 KRIKSASKE 236 >UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherichia coli IAI1 RepID=B7M4D0_ECO8A Length = 204 Score = 221 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 154/156 (98%), Positives = 154/156 (98%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGV 156 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA Sbjct: 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQANT 160 Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats. Identities = 51/67 (76%), Positives = 53/67 (79%), Gaps = 2/67 (2%) Query: 208 FRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENS 267 R E + V + QQANTTHFDVG KVRQTIQELGGTMPEELPTPQVSIKQLENS Sbjct: 140 LRNELKEHN--KQLVEAAQQANTTHFDVGSKVRQTIQELGGTMPEELPTPQVSIKQLENS 197 Query: 268 VKITEKK 274 VKITEKK Sbjct: 198 VKITEKK 204 >UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=Streptococcus pneumoniae RepID=C5R1Q6_STRPN Length = 186 Score = 200 bits (509), Expect = 4e-50, Method: Composition-based stats. Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 2/153 (1%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct: 11 FENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNKS 70 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F L Sbjct: 71 IPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQEL--QENFDNL 128 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATAT 160 E++KRL +R+E+K HNK L E+A+ A AT + Sbjct: 129 TEEQKRLAIRDEIKHHNKSLSESAESAENATYS 161 >UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli n=3 Tax=Bifidobacterium longum RepID=Q8G7T6_BIFLO Length = 187 Score = 187 bits (474), Expect = 4e-46, Method: Composition-based stats. Identities = 59/156 (37%), Positives = 86/156 (55%), Gaps = 5/156 (3%) Query: 14 INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSN 73 + E W AR+L +GY + +F +TRAK+AC+NSG +++ HF + V +GS Sbjct: 20 TEDSKVEYWYARELMTYMGYDRWENFSKAITRAKQACDNSGVSVESHFRDTTRDVTLGSG 79 Query: 74 AKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR 133 A R++ D+ L+RYACYL+ QNGDP K +A Q+YFA+QTR+ E+ + Q + R Sbjct: 80 ATRSIADVKLTRYACYLIAQNGDPKKEEVALLQSYFAVQTRKTEIIE-----QRMGEISR 134 Query: 134 LFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHG 169 L R L K+L Q TA + NH Sbjct: 135 LAGREALATAEKKLYPYTQITHNKTAQEHMYTPNHA 170 >UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5GKB1_9ACTO Length = 337 Score = 176 bits (447), Expect = 6e-43, Method: Composition-based stats. Identities = 60/117 (51%), Positives = 72/117 (61%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ + A+GA+ WSAR L +LLGY + F + RA ACENSGH DHF Sbjct: 65 PFDATRNTRADGADFWSARDLQELLGYERWERFETAVERAIAACENSGHEPKDHFRGAAK 124 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 V +GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A A Sbjct: 125 KVSLGSGATRAVIDWHLSRYAAYLVAMNGDPRKDQIAAAQTYFAVKTREAEIAATRA 181 >UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LGB1_PARD8 Length = 168 Score = 172 bits (435), Expect = 1e-41, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 7/148 (4%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEI 64 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ Sbjct: 11 GKFESISC-EVEGIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDV 69 Query: 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 MV IG ++ + DI+L+RYACYL+ QNGD K +A QTYFA+QTR+ E+ + Sbjct: 70 GKMVSIGYGVEKQIDDILLTRYACYLIAQNGDSRKLQVAFAQTYFAVQTRKAEVIEQRLL 129 Query: 125 K-----QLREDEKRLFLRNELKEHNKQL 147 Q +RL ++K+ +++ Sbjct: 130 DCDMLLQRGIKPERLSPDEDIKKVQRRI 157 >UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YL03_ANASP Length = 266 Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats. Identities = 48/118 (40%), Positives = 64/118 (54%), Gaps = 4/118 (3%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++I+ I+ +G E W AR L +LGY ++R + RA AC+N G ++HF Sbjct: 14 PFDQIRKIDDDGTEYWLARDLMPILGYQQWRRLEDAINRAIAACKNIGQESENHFL---- 69 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 + S R D LSR+ CYL NGD KP IAA Q YFA++TR ELA Sbjct: 70 PMPAKSTGGRPGDDFKLSRHGCYLTAMNGDSRKPEIAAAQNYFAVKTREAELAPQSQE 127 >UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacteria RepID=Q3ARJ2_CHLCH Length = 412 Score = 163 bits (412), Expect = 7e-39, Method: Composition-based stats. Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 1/163 (0%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 ++H FE+I+ + NG E WSAR L K+L YSE+RHF+PV+ R KEAC NSG I DHF Sbjct: 7 HQHIGLFEKIRQTDENGNEFWSARDLSKVLEYSEFRHFLPVIERGKEACINSGQQIADHF 66 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 E+IL+M+ R ++ I LSRYACYL+VQN D K V+A GQTYFA + Q L Sbjct: 67 EDILEMITTDKTEHREIEGIKLSRYACYLIVQNADHGKEVVALGQTYFANLSNIQLLNKS 126 Query: 122 EAFKQLRE-DEKRLFLRNELKEHNKQLVEAAQQAGVATATDFA 163 K + + +++ L +L + +QA F Sbjct: 127 RISKFIYTIEGQQIILDRDLAMLYQTDTRTLKQAVKRNIERFP 169 >UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella fastidiosa RepID=Q87CK5_XYLFT Length = 186 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 15/192 (7%) Query: 47 KEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQ 106 AC G + F ++V+ G +A+K LSR+AC LV D KP +A + Sbjct: 1 MGACSRLGLDPTEAFVR-EEIVQDG----KAIKTYQLSRFACLLVSMTADSKKPEVARAK 55 Query: 107 TYFAIQTRRQELADDEAFKQL-REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIF 165 T A +A+ +++ ED RL R +LK K + AA+ G+ A +F IF Sbjct: 56 TILAA------IANTLIEQRIQSEDLARLETREDLKFGEKAMTSAAKDGGLQNA-EFGIF 108 Query: 166 QNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSK 225 ++ G++G+Y + + + K L + + D MG ELA NLFR TQT +++ V + Sbjct: 109 KDAGFRGMYN-MSLRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIRNKDV-IR 166 Query: 226 QQANTTHFDVGR 237 H GR Sbjct: 167 TTTTLKHCPTGR 178 >UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q855G1_9CAUD Length = 288 Score = 159 bits (403), Expect = 7e-38, Method: Composition-based stats. Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 8/145 (5%) Query: 7 PFEEIKLINANGAE-QWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ ++ G E +WSAR L + +GYS ++ F P++ RAK A + G + F + + Sbjct: 12 PFDAGRIPCPQGGEDRWSARWLMEQMGYSSWQKFEPIIERAKTAAASEGFNVRTLFTQTV 71 Query: 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 R D ++R+A YL+ NG P+KP +AA QTYFA++TR+ E+ A Sbjct: 72 K-----KTGGRPETDYHVTRFAAYLIAMNGQPSKPEVAAAQTYFAVKTRQAEV--QPAIP 124 Query: 126 QLREDEKRLFLRNELKEHNKQLVEA 150 + E L + + ++LV Sbjct: 125 DITTPEGLLAMTEMFADTARKLVAV 149 >UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXE8_XANC8 Length = 286 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 92/150 (61%), Positives = 116/150 (77%) Query: 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 + F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL Sbjct: 127 EAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGA 186 Query: 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 K IH RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ V Sbjct: 187 KDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTV 246 Query: 240 RQTIQELGGTMPEELPTPQVSIKQLENSVK 269 R+TIQELGGT+PE LP P+ SIK+L+ + Sbjct: 247 RKTIQELGGTLPENLPAPETSIKRLQKDAR 276 >UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKK6_CORK4 Length = 263 Score = 153 bits (387), Expect = 4e-36, Method: Composition-based stats. Identities = 64/210 (30%), Positives = 90/210 (42%), Gaps = 19/210 (9%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF++IK +G E WSAR L L+GY+ + F + RA+ + +NSG F I + Sbjct: 14 PFDQIKRAREDGTEYWSARDLMPLMGYARWEDFYKITRRAEASAKNSGQ---GGFSVITE 70 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 G R D L+R A YLV NGDP KP +AA Q+YFA++TR E Sbjct: 71 KAPEGG---RPRTDFHLNRLAAYLVAMNGDPNKPEVAAAQSYFALRTREAETKPSFDPAA 127 Query: 127 LREDE------KRLFLRNELKEHNKQLVEAAQ-------QAGVATATDFAIFQNHGYQGL 173 L E R L+ NK+L A+ G + A G L Sbjct: 128 LTRAEILQIALNAEEERLALEAENKELSPKAEAYDTFLDATGKYSVGAVAKMLGKGQNWL 187 Query: 174 YGGLDQKAIHQRKGLKKNQKILDHMGSTEL 203 + L + + KG +N +M E+ Sbjct: 188 FRELRNRGVLITKGAMRNTPYQQYMHHFEV 217 >UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococcus elongatus RepID=Q31Q71_SYNE7 Length = 215 Score = 151 bits (382), Expect = 2e-35, Method: Composition-based stats. Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 14/202 (6%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + NG E W+ R+L L Y ++HF + RA +C+ G + DHF + Sbjct: 4 PFDSIRHV-ENGQEFWNGRELMGFLDYPHWQHFTNAIDRAIISCQRRGKHVADHFSRTIT 62 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 K G R +D LSR A YLV N DP K +AA Q YF ++ R E D +A Sbjct: 63 KFKTGG---RPREDYRLSRLAAYLVAMNSDPRKRSVAAAQEYFYLRIRESEERDQKALPT 119 Query: 127 LREDEKR-LFLRNELK-----EHNKQLVEAAQQAGVATATDFAIFQNHGY---QGLYGGL 177 + + LR + N+ Q+ A TD + + + Q +Y Sbjct: 120 AALPTSQPVPLRRKTTAPADWHRNRDESGRFTQSNPAAKTDAELLSDFQFGMVQAIYALS 179 Query: 178 DQKAIHQRKGL-KKNQKILDHM 198 + + + L K+ + + + Sbjct: 180 QINRLSRDRSLAKQADTLCNWL 201 >UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WWQ4_9ACTO Length = 306 Score = 144 bits (362), Expect = 4e-33, Method: Composition-based stats. Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 3/120 (2%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 PF+ I+ + +G E WSAR+L LLGY ++ F + +A+ E ++ E L Sbjct: 16 PFDSIRRLREDGVEYWSARELMPLLGYKKWERFADAVEQARSVIEAENGSLAAEQEASLQ 75 Query: 67 MVKIGSNAKRALKD-IVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 G R + D LSR A YL GD KP I A YFA +TR EL F Sbjct: 76 REAFGRT--RQIGDNYWLSRRASYLTAMRGDSRKPEIRAALIYFANRTREAELGHASQFS 133 >UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9A6_9BACT Length = 116 Score = 118 bits (295), Expect = 2e-25, Method: Composition-based stats. Identities = 54/99 (54%), Positives = 78/99 (78%), Gaps = 5/99 (5%) Query: 48 EACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQT 107 ++C NSG ++DHF E+ DMV IGS A+R LK +++SRYACYLV+QN DPAK ++A GQT Sbjct: 10 QSCFNSGQRVEDHFVEVTDMVGIGSGARRPLKTVMMSRYACYLVIQNADPAKEIVAQGQT 69 Query: 108 YFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQ 146 YFA+QTRRQEL+D++ E+++RL +R++L+ HN + Sbjct: 70 YFALQTRRQELSDEQV-----EEQRRLAIRSDLRRHNSR 103 >UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV0_9DELT Length = 189 Score = 111 bits (276), Expect = 3e-23, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 7/130 (5%) Query: 150 AAQQAGVATATDFAIFQNHGYQGL-----YGGLDQKAIHQRKGLKKNQKILDHMGSTELA 204 A + + + + ++G+ GG + + R G+ K + + D + + +A Sbjct: 47 TAIKRAIESCETTGYKADDHFRGVTKMIEIGGHTTQVMKDRYGITKTRPLADFLPTLTIA 106 Query: 205 ANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQL 264 A T ++++ + +Q + H VR + + G PE+LP P+ I +L Sbjct: 107 AKNLATEMTNHNVRQEDLRGEQAITSEHVQNNVSVRDMLGQR-GIKPEKLP-PEEDIGKL 164 Query: 265 ENSVKITEKK 274 E VK EKK Sbjct: 165 ERRVKAEEKK 174 Score = 92.9 bits (229), Expect = 9e-18, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 8 FEEIKLI-NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F+ + E W AR L LGY+ + +F+ + RA E+CE +G+ DDHF + Sbjct: 13 FDGLSSTLPDENVEFWFARDLMAPLGYARWENFLTAIKRAIESCETTGYKADDHFRGVTK 72 Query: 67 MVKIGSNAKRALKD 80 M++IG + + +KD Sbjct: 73 MIEIGGHTTQVMKD 86 >UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella fastidiosa RepID=Q3R926_XYLFA Length = 107 Score = 103 bits (257), Expect = 6e-21, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N + FE W A QL + LGY ++ F V+T+A AC G + F Sbjct: 3 NLSIEIFENGGQEGE--TRFWYAHQLMQWLGYESWQAFQNVITKAMGACSRLGLDPTEAF 60 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQ 106 ++V+ G +A+K LSR+AC LV D KP G+ Sbjct: 61 VR-EEIVQDG----KAIKTYQLSRFACLLVSMTADSKKPNSGLGE 100 >UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6YZL5_9BACE Length = 85 Score = 83.7 bits (205), Expect = 6e-15, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 HF ++ MV +GS A+R + DI +RYACYL QNGD KP IA Q Y+ + R Sbjct: 4 HFADVSKMVSVGSGAEREIDDIYFTRYACYLTAQNGDARKPAIAFAQNYYDGKPR 58 >UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZC8_9FIRM Length = 135 Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 27 LGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRY 86 L L+ S F V+ AC SGH + F E+ +V G+ + +++KD L+RY Sbjct: 16 LMYLIILSGETFFQKVINGEMIACATSGHEVTSDFAEVGKIVDAGATS-KSIKDYELTRY 74 Query: 87 ACYLVVQNGDPAKPVIAA 104 ACYL+VQNGDP K V +A Sbjct: 75 ACYLIVQNGDPRKEVRSA 92 Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats. Identities = 16/30 (53%), Positives = 25/30 (83%) Query: 237 RKVRQTIQELGGTMPEELPTPQVSIKQLEN 266 ++VR I+++GGTMPE+LP P+ SI+Q+E Sbjct: 87 KEVRSAIEKIGGTMPEDLPVPEKSIQQIEK 116 >UniRef50_B0VG66 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG66_9BACT Length = 81 Score = 56.7 bits (135), Expect = 7e-07, Method: Composition-based stats. Identities = 5/64 (7%), Positives = 26/64 (40%) Query: 170 YQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQAN 229 + L+GG++ + + ++ + + + D + + + + T + + ++ Sbjct: 18 DEALFGGINTQEMKRKLNIPISGPLADFLPTITIKSKDLATKITSHNIIVKDLICLPNSD 77 Query: 230 TTHF 233 ++ Sbjct: 78 LSNC 81 >UniRef50_A1WQG7 Putative uncharacterized protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQG7_VEREI Length = 67 Score = 56.3 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 16/36 (44%), Positives = 20/36 (55%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVL 43 FE G E W AR L LLGY+E+R+F V+ Sbjct: 13 FEGHAQQTDGGVEYWLARDLQHLLGYAEWRNFGTVI 48 >UniRef50_C1D093 Putative uncharacterized protein n=1 Tax=Deinococcus deserti VCD115 RepID=C1D093_DEIDV Length = 232 Score = 42.1 bits (97), Expect = 0.020, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 17/204 (8%) Query: 46 AKEACENSGHTIDDHFEE-------ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPA 98 A A + G + ++E + G+ + L +R A L Sbjct: 25 ATTALAHLGLETPEQWDEFAHTHQLTSPLRDFGAGPEPTLHPDEFTRLAFVLDTIEA--- 81 Query: 99 KPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR--LFLRNELKEHNKQLVEAAQQAGV 156 + QT + + + ++ + E R L R E ++L+ + G Sbjct: 82 RRWRKRAQTLLSRAMQGDVRLSAQIAERNPDPEARRWLAARLESTHARRELLSTVSRHG- 140 Query: 157 ATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEK 216 + + + + + G D I + +G+K+ + D + STEL + T T Sbjct: 141 GSGQVYGQLGSISNRSVLG-TDSATIRRERGVKQTR---DGLNSTELLRMAYLDTATARA 196 Query: 217 LKRDGVNSKQQANTTHFDVGRKVR 240 ++ G + H V R+ R Sbjct: 197 IQEHGAHGNAAILRVHEQVARRER 220 >UniRef50_C7M988 Phage antirepressor protein n=1 Tax=Capnocytophaga ochracea DSM 7271 RepID=C7M988_CAPOD Length = 257 Score = 40.5 bits (93), Expect = 0.068, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 7/136 (5%) Query: 2 NEHHQPFEE-IKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 N ++QP +E IK+ NG + SAR+L K L + F R + H Sbjct: 6 NTNYQPMQELIKITEKNGNKAVSARELHKFLEIT--ERFSNWFERMLQYGFVENHD---- 59 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 F + + + A+R L+D L+ + + +A + R + Sbjct: 60 FTSVKSFTLVNNGAQRELEDYALTLDCAKEISMLQRSERGKMARQYFIECEKQLRAKEQA 119 Query: 121 DEAFKQLREDEKRLFL 136 + Q + RL Sbjct: 120 HQQIPQSFSEALRLAA 135 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria... 355 6e-97 UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria... 309 6e-83 UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria... 308 1e-82 UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotell... 301 2e-80 UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobac... 288 2e-76 UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=E... 279 8e-74 UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophil... 268 1e-70 UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicr... 268 2e-70 UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroid... 263 5e-69 UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodicty... 255 1e-66 UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospir... 243 3e-63 UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bactero... 241 3e-62 UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobac... 240 3e-62 UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherich... 213 6e-54 UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=St... 198 2e-49 UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Coryneb... 194 2e-48 UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli... 186 7e-46 UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacter... 183 6e-45 UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococc... 182 1e-44 UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabac... 178 2e-43 UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5G... 177 5e-43 UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. ... 168 3e-40 UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q85... 159 9e-38 UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella f... 157 3e-37 UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomon... 145 2e-33 UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Strepto... 143 6e-33 UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta p... 128 2e-28 UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae... 118 2e-25 UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella... 115 2e-24 UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacteri... 99 2e-19 UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bactero... 85 2e-15 UniRef50_B0VG66 Putative uncharacterized protein n=1 Tax=Candida... 71 4e-11 UniRef50_A1WQG7 Putative uncharacterized protein n=1 Tax=Vermine... 63 1e-08 Sequences not found previously or not previously below threshold: CONVERGED! >UniRef50_P23840 DNA-damage-inducible protein D n=89 Tax=Bacteria RepID=DIND_ECOLI Length = 274 Score = 355 bits (912), Expect = 6e-97, Method: Composition-based stats. Identities = 274/274 (100%), Positives = 274/274 (100%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK Sbjct: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQK 180 Query: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR Sbjct: 181 AIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVR 240 Query: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK Sbjct: 241 QTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 >UniRef50_A1BH52 DNA-damage-inducible protein D n=15 Tax=Bacteria RepID=A1BH52_CHLPD Length = 284 Score = 309 bits (792), Expect = 6e-83, Method: Composition-based stats. Identities = 95/269 (35%), Positives = 143/269 (53%), Gaps = 9/269 (3%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 FE G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ Sbjct: 11 TTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFLNVVSKAKTACEISGHNVADHFADVG 70 Query: 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 MV +GS ++R + DI+L+RYACYL+ QNGD K IA QTYFAIQTRR E+ + Sbjct: 71 KMVDLGSGSQREVDDIMLTRYACYLIAQNGDSRKQEIAFAQTYFAIQTRRAEVIEQRLL- 129 Query: 126 QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQR 185 + +R+ R +L K+L + + +FA+ ++ G Q L+G +A+ Sbjct: 130 ----EAERVSARKKLSATEKELSGVIFEQ-TGSTENFALIRSKGDQALFGK-STQAMKAE 183 Query: 186 KGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 + + + D + L A F T + G+ S+ Q +T H + VR+T+ E Sbjct: 184 WNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGQISTEHITNNKAVRKTLLE 243 Query: 246 LGGTMPEELPTPQVSIKQLENSVKITEKK 274 G PE LP P +K++E + EKK Sbjct: 244 R-GIRPESLP-PAEDVKKVERRLASEEKK 270 >UniRef50_C6CR17 DNA-damage-inducible protein D n=26 Tax=Bacteria RepID=C6CR17_DICZE Length = 289 Score = 308 bits (789), Expect = 1e-82, Method: Composition-based stats. Identities = 95/275 (34%), Positives = 142/275 (51%), Gaps = 9/275 (3%) Query: 1 MNEHHQPFEEIKL-INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDD 59 + + F+ + I G E W AR L + LGY+ + +F + RA E+C+ +G+ D Sbjct: 6 IQQLKSHFDNLSHTIPEEGVEFWFARDLMEPLGYARWENFQTAIGRAVESCKTTGYDESD 65 Query: 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELA 119 HF + MVKIGS A RA++D +L+RYACYL+ QNGDP K IA Q+YFAIQTR+QEL Sbjct: 66 HFRGVTKMVKIGSGADRAVEDFMLTRYACYLIAQNGDPRKEAIAFAQSYFAIQTRKQELI 125 Query: 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 +D Q RL R L+E K L + + GV F ++ G L+GG Sbjct: 126 EDRMRLQA-----RLDARERLRESEKTLSQNLYERGV-DDKGFGRIRSRGDAALFGGNTT 179 Query: 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 + + R G+ + + + D + + +AA T + + ++ + H V Sbjct: 180 QMMKDRYGITQARPLADFLPTLTIAAKNLATEMTNHNVMQGQLHGEPSITREHEQNNLSV 239 Query: 240 RQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 R + + G PE+LP + IK+LE VK EKK Sbjct: 240 RDMLGQR-GIKPEQLPA-EEDIKKLERRVKTEEKK 272 >UniRef50_D1QN57 DNA-damage-inducible protein D n=1 Tax=Prevotella oris F0302 RepID=D1QN57_9BACT Length = 308 Score = 301 bits (771), Expect = 2e-80, Method: Composition-based stats. Identities = 91/277 (32%), Positives = 144/277 (51%), Gaps = 13/277 (4%) Query: 3 EHHQPFEEI-KLINANG----AEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTI 57 ++ F+ I + I ++ E W AR+L +LGY+ + +F+ + RA +C++ + Sbjct: 27 QYKSTFDGIVRHIESDDAKDQIEVWFARELQTILGYARWENFLVAIHRAVASCKSQDINV 86 Query: 58 DDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQE 117 DDHF E+ MV +GS AKR + D +L+RYACYL+ QNGDP K IA Q+YFA+QTR+ E Sbjct: 87 DDHFREVTKMVDLGSGAKREVSDFMLTRYACYLIAQNGDPKKEEIAFAQSYFAVQTRKAE 146 Query: 118 LADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGL 177 L ++ RL R++L+ KQL + + GV F ++ G L+GG Sbjct: 147 LIEERLNL-----LSRLETRDKLRAAEKQLSQNIYERGV-DDKGFGRIRSKGDTALFGGH 200 Query: 178 DQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGR 237 + + +R G+K N+ + D + + +AA T ++ + + H + Sbjct: 201 TTEDMKKRLGVKSNRPLADFLPTLTIAAKNLATEMTNYNVENKDLYGEPSITREHIQNNQ 260 Query: 238 KVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK 274 VR + G PEELP + IK+LE V EKK Sbjct: 261 SVRAMLG-NRGIKPEELPAAE-DIKKLERKVTRDEKK 295 >UniRef50_Q60CS7 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=Q60CS7_METCA Length = 295 Score = 288 bits (736), Expect = 2e-76, Method: Composition-based stats. Identities = 132/265 (49%), Positives = 171/265 (64%), Gaps = 7/265 (2%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 FE++K NA+GAE WSAR+L LLGYS++R F + RA +C+ SG++ + HF Sbjct: 13 SFEDLKQTNAHGAEYWSARELQPLLGYSQWRRFEQAIERAITSCKESGNSPEHHFAGAGK 72 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 + G A + + D LSR+ACYL+ QNGDP KP IA Q YFAIQTRRQEL+D Q Sbjct: 73 PITGGKGAVQVVDDYHLSRFACYLIAQNGDPRKPEIAQAQKYFAIQTRRQELSD-----Q 127 Query: 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 D +RL LR + E K L AAQQAGV + F +F + GY+GLYGGL + AI QRK Sbjct: 128 AAADLERLELRKQTAEEFKALSGAAQQAGVQSKM-FGVFHDAGYKGLYGGLGRDAIKQRK 186 Query: 187 GLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQEL 246 + +LD M +TELAAN FR TQT +KL RDGV S+ QA TH VGR+VR IQ + Sbjct: 187 AIPDKDNLLDRMNATELAANQFRMTQTRDKLARDGVRSQAQAIQTHEQVGREVRAAIQRI 246 Query: 247 GGTMPEELPTPQVSIKQLENSVKIT 271 GGT+PE++P + IK++E +K Sbjct: 247 GGTLPEDIPAAE-HIKEVEKRLKSA 270 >UniRef50_B7UN88 Predicted DNA-damage-inducible protein n=2 Tax=Escherichia coli RepID=B7UN88_ECO27 Length = 280 Score = 279 bits (713), Expect = 8e-74, Method: Composition-based stats. Identities = 88/280 (31%), Positives = 135/280 (48%), Gaps = 24/280 (8%) Query: 1 MNEHHQPFEEIKLI------NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSG 54 M+ F++ + NG W A L +LGY+ + + +A C + Sbjct: 8 MSRQITVFDDTSQLTFDDFARENGVTYWFASDLAMMLGYNGMDQILKAINKATSVCVSLD 67 Query: 55 HTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 + D+F I ++ A D L+R+ACYL+V NGD + +A Q YFA Sbjct: 68 IPVYDNF--------IQMPSENAKNDFKLTRFACYLIVMNGDISNQKVANAQAYFAG--- 116 Query: 115 RQELADDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLY 174 A+ + R++LR E+ K L A + GV D+ +FQN GY+G+Y Sbjct: 117 --LAAEIHTTYHNHDAVNRVYLRGEITSREKTLSHVAHKHGV---VDYGLFQNAGYRGMY 171 Query: 175 GGLDQKAIHQRKGL-KKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHF 233 ++ + RKGL KK+ +LD MGS ELAAN+FR TQTE +++ + + Q Sbjct: 172 N-MNLSQLKARKGLTKKDGTMLDFMGSEELAANIFRITQTEARIRNQNLKGQSQLENAAE 230 Query: 234 DVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEK 273 VGR VR + GT PE + Q I+++ +S+K T K Sbjct: 231 TVGRSVRNVMISNTGTAPENIKLSQEKIQKVRSSIKKTHK 270 >UniRef50_C9MEB1 DNA-damage-inducible protein d n=2 Tax=Haemophilus influenzae RepID=C9MEB1_HAEIN Length = 281 Score = 268 bits (686), Expect = 1e-70, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 20/268 (7%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F++ NG W A L +LGY++ + + + +A C N I D+F Sbjct: 23 SFDDFAK--QNGITYWYASDLAMMLGYNDMQAILKAMNKAYAVCNNLNIPIADNF----- 75 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 I + + D ++R+ACYL V NG+ + P +AA Q YFA + + Q Sbjct: 76 ---IQTQSPNTPSDFKMTRFACYLTVMNGNISNPKVAAAQAYFA-----KLADEIHTLCQ 127 Query: 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRK 186 E+ R++LR ++ + K L A + GV ++A FQN GY+G+Y ++ K++ +K Sbjct: 128 SAEEVDRVYLRGDISDREKSLSHIAHKHGV---ENYAFFQNAGYRGMYN-MNIKSLKNKK 183 Query: 187 GLKKNQ-KILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 GL ++ +LD M + ELAAN+FR TQTE K++ + ++ VGR VR + Sbjct: 184 GLFDDKASLLDFMDNEELAANIFRVTQTEAKIRNQNIKGQKNLENAAETVGRSVRNVMIS 243 Query: 246 LGGTMPEELPTPQVSIKQLENSVKITEK 273 GT PE+L Q I ++++S+K T K Sbjct: 244 NTGTAPEDLALSQEKINKIQSSIKKTHK 271 >UniRef50_C6QG93 DNA-damage-inducible protein D n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QG93_9RHIZ Length = 291 Score = 268 bits (684), Expect = 2e-70, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 138/261 (52%), Gaps = 7/261 (2%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 E+ K I+ G W AR++ ++GY +R+F L RAKEA D HF E M Sbjct: 18 LEQAKRISPKGVPYWLAREIMPIMGYQSWRNFEKTLGRAKEAFGAIHEDADKHFVETDTM 77 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + IG A+R+ KD LSR A YL+ NGDPAKP IAA Q YFA+QTRR E+ D Sbjct: 78 LLIGGGAERSGKDYFLSRPAAYLIAMNGDPAKPEIAAAQAYFAVQTRRMEIEDAR----- 132 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 +DEKRL R + K++ A++AGVA T F + YQG+Y A+ + KG Sbjct: 133 TKDEKRLEGREKATVAFKKVSSVAKKAGVAN-THQPFFHDARYQGIYRATSAAAVREAKG 191 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELG 247 + ++ G+ EL+ + F+ + + R+G+ + A + DV R VR TI G Sbjct: 192 IPDGANPFNYFGALELSMHEFQMNLAADVIAREGIKDETTAIQRNLDVARHVRSTIDAAG 251 Query: 248 GTMPEELPTPQVSIKQLENSV 268 GT P ++ + I +++ + Sbjct: 252 GTDPMKIEIAEP-IDEVKKRL 271 >UniRef50_D1K5A6 DNA-damage-inducible protein D n=1 Tax=Bacteroides sp. 3_1_33FAA RepID=D1K5A6_9BACE Length = 266 Score = 263 bits (671), Expect = 5e-69, Method: Composition-based stats. Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 19/275 (6%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N FE+ K N NG W A ++ +LGY++ + F VL RA +A + H+ Sbjct: 6 NNAILSFEDFK--NQNGIVYWWASEVMVMLGYNDMKAFCKVLDRATKAFVSLNIP---HY 60 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 E I+ + + +N +D L+R+ACYL NGDP KP +A Q YFA QTR+ EL Sbjct: 61 ENIIAVKR--NNNGVEFQDFKLTRFACYLAAMNGDPKKPEVALAQAYFAQQTRKFEL--- 115 Query: 122 EAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKA 181 + + ++ R+ +R EL + NK L A+ A V TD+A FQN GY G+Y ++ Sbjct: 116 --YIENNQEIDRVLIREELADGNKSLASTAKAANV---TDYAKFQNAGYLGMYN-MESWK 169 Query: 182 IHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQ 241 + +++G+KK + + D M TELAANLFR TQTEE +K ++ + TH+ VGR+VR Sbjct: 170 LEKKRGVKKGK-LFDRMSRTELAANLFRVTQTEELIKSKQISGQANLEQTHYTVGRQVRN 228 Query: 242 TIQELGGTMPEELPTPQV--SIKQLENSVKITEKK 274 +++ G PE+LP + IK+ KK Sbjct: 229 IVEQNTGRKPEQLPQEKELPIIKKALKMTAKEMKK 263 >UniRef50_B4SF56 DNA-damage-inducible protein D n=1 Tax=Pelodictyon phaeoclathratiforme BU-1 RepID=B4SF56_PELPB Length = 241 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 52/269 (19%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 FE G E W AR L LLGYS++ +F+ V+++AK ACE SGH + DHF ++ Sbjct: 11 TTFEAHARKVEGGVEYWLARDLQYLLGYSKWDNFVGVVSKAKTACELSGHKVSDHFADVG 70 Query: 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 +++ A + + DI+L+RYACYL+ QNGD K IA QT Sbjct: 71 KTIQMPKGATKEVPDIMLTRYACYLIAQNGDSRKQEIAFAQT------------------ 112 Query: 126 QLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQR 185 +A +FA+ ++ G Q L+G +A+ Sbjct: 113 -------------------------------GSAENFAVIRSKGDQVLFGK-STQAMKAE 140 Query: 186 KGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQE 245 + + + D + L A F T + G+ S+ + H + VR T+ Sbjct: 141 WNVPDKRPLADFAPTIILKAKDFATEITIFNAREHGMKSEGGISNEHITNNKAVRNTLLG 200 Query: 246 LGGTMPEELPTPQVSIKQLENSVKITEKK 274 G PE LP P +K++E + EK+ Sbjct: 201 R-GICPESLP-PAEDVKKVERRLASEEKQ 227 >UniRef50_D1B333 DNA-damage-inducible protein n=1 Tax=Sulfurospirillum deleyianum DSM 6946 RepID=D1B333_SULD5 Length = 269 Score = 243 bits (621), Expect = 3e-63, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 133/259 (51%), Gaps = 24/259 (9%) Query: 16 ANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAK 75 NG W A +L +LGY+EY+ F+ + +A C + I HF + + +N Sbjct: 23 QNGIRYWLASELANMLGYTEYKTFLKSINKAMTVCTSLNMQIISHF------IPLANN-- 74 Query: 76 RALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKRLF 135 D L+R+AC+L+ N D K +A Q YFA LAD + E +R+ Sbjct: 75 ----DFKLTRFACFLITMNADIKKEKVAKAQIYFA------SLADAISELMQAEQIERIE 124 Query: 136 LRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKGLKKN-QKI 194 +R EL NK L A AGV ++A+F N GY G+Y + + + KG++ + Sbjct: 125 IREELTNKNKSLAATANMAGV---ENYALFNNAGYMGMYN-MSFNDLKKVKGIEGTTKSP 180 Query: 195 LDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEEL 254 LD MG ELAANLFR ++TE K+K D + ++ T +VG+KVR + + G PE L Sbjct: 181 LDFMGKRELAANLFRISETEAKIKSDHIYGQKNLENTAKEVGKKVRNIMIDNDGVRPEML 240 Query: 255 PTPQVSIKQLENSVKITEK 273 QV++ ++ ++K EK Sbjct: 241 -ARQVALSDVKKNIKKVEK 258 >UniRef50_A7V0H9 Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V0H9_BACUN Length = 223 Score = 241 bits (614), Expect = 3e-62, Method: Composition-based stats. Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 8/211 (3%) Query: 8 FEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDM 67 FE I G E WSAR+L +LGY++++ F VL +AKEAC+N+G +HF I Sbjct: 14 FESIAC-EYEGVECWSARELYPILGYAKWQTFENVLGKAKEACQNAGVETSNHFTGISKT 72 Query: 68 VKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQL 127 + + A + ++D +L+RYACYLV QNGDP K IA Q YFA+QTR E+ + Sbjct: 73 ILMPKGASKDIEDFMLTRYACYLVAQNGDPRKSEIAFAQNYFAVQTRVAEVIEQRLL--- 129 Query: 128 REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQKAIHQRKG 187 D R+ R++L E K+L + GV F I ++ G Q L+ ++ + ++ G Sbjct: 130 --DYDRVQARHKLAETEKRLSGVLYERGV-DDKGFGIIRSKGDQALFR-MNTAMLKRKLG 185 Query: 188 LKKNQKILDHMGSTELAANLFRATQTEEKLK 218 + + + D + + + A F A T L+ Sbjct: 186 APEKRALADFLPTLGIKAKDFAAEMTSSVLR 216 >UniRef50_C3X7Y6 DNA-damage-inducible protein D n=2 Tax=Proteobacteria RepID=C3X7Y6_OXAFO Length = 249 Score = 240 bits (613), Expect = 3e-62, Method: Composition-based stats. Identities = 76/249 (30%), Positives = 128/249 (51%), Gaps = 15/249 (6%) Query: 28 GKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYA 87 + LGY + F V+ R+ AC + + ++F E+ + + L+R+A Sbjct: 1 MQKLGYDSWTSFNRVVNRSISACASLNVPVMENFMEMKYRFD-----GKDVSTYKLTRFA 55 Query: 88 CYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLRED-EKRLFLRNELKEHNKQ 146 C+L+ N D KP + +T A +AD + + D +R+ +RNELK+ + Sbjct: 56 CFLITMNADSRKPEVLQAKTVLAG------IADALVEQAIHHDSVERIEVRNELKDGERF 109 Query: 147 LVEAAQQAGVATATDFAIFQNHGYQGLYG-GLDQKAIHQRKGLKKNQKILDHMGSTELAA 205 L A AG+ + +F IF++ GY+GLY L+ ++ ++KN+ + D MG +ELAA Sbjct: 110 LSGVAMSAGLQS-REFGIFRDAGYRGLYNMSLNDLIRYKGMTIEKNKTLYDFMGKSELAA 168 Query: 206 NLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLE 265 NLFR TQT E++K + V + + T VG +VR + GG PE LP + +I ++ Sbjct: 169 NLFRVTQTTERIKNNNVKGLKNLSQTAKSVGTEVRNVMLRSGGLEPENLPL-EENINDVK 227 Query: 266 NSVKITEKK 274 +K K+ Sbjct: 228 KRIKSASKE 236 >UniRef50_B7M4D0 DNA-damage-inducible protein D n=1 Tax=Escherichia coli IAI1 RepID=B7M4D0_ECO8A Length = 204 Score = 213 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 154/156 (98%), Positives = 154/156 (98%) Query: 1 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 60 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH Sbjct: 5 MNEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDH 64 Query: 61 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 120 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD Sbjct: 65 FEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELAD 124 Query: 121 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGV 156 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQA Sbjct: 125 DEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQANT 160 Score = 76.7 bits (187), Expect = 8e-13, Method: Composition-based stats. Identities = 51/67 (76%), Positives = 53/67 (79%), Gaps = 2/67 (2%) Query: 208 FRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENS 267 R E + V + QQANTTHFDVG KVRQTIQELGGTMPEELPTPQVSIKQLENS Sbjct: 140 LRNELKEHN--KQLVEAAQQANTTHFDVGSKVRQTIQELGGTMPEELPTPQVSIKQLENS 197 Query: 268 VKITEKK 274 VKITEKK Sbjct: 198 VKITEKK 204 >UniRef50_C5R1Q6 Possible DNA-damage-inducible protein n=2 Tax=Streptococcus pneumoniae RepID=C5R1Q6_STRPN Length = 186 Score = 198 bits (503), Expect = 2e-49, Method: Composition-based stats. Identities = 78/154 (50%), Positives = 106/154 (68%), Gaps = 2/154 (1%) Query: 7 PFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 FE IK I+ NG E W AR L K L Y+E+R+F+ V+ +AK AC+ + + I +HF ++ Sbjct: 10 TFENIKHIDENGVEFWYARDLQKTLEYTEWRNFLLVIDKAKIACDTAKNPIVEHFVDVNK 69 Query: 67 MVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQ 126 + G N R +KD L+RYACYL+VQNGDP K VIA GQTYFA++TR+QEL E F Sbjct: 70 SIPNGYNTTRDIKDFKLTRYACYLIVQNGDPRKEVIALGQTYFALKTRQQEL--QENFDN 127 Query: 127 LREDEKRLFLRNELKEHNKQLVEAAQQAGVATAT 160 L E++KRL +R+E+K HNK L E+A+ A AT + Sbjct: 128 LTEEQKRLAIRDEIKHHNKSLSESAESAENATYS 161 >UniRef50_C4LKK6 Putative uncharacterized protein n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKK6_CORK4 Length = 263 Score = 194 bits (494), Expect = 2e-48, Method: Composition-based stats. Identities = 64/212 (30%), Positives = 90/212 (42%), Gaps = 19/212 (8%) Query: 5 HQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 PF++IK +G E WSAR L L+GY+ + F + RA+ + +NSG F I Sbjct: 12 VTPFDQIKRAREDGTEYWSARDLMPLMGYARWEDFYKITRRAEASAKNSGQ---GGFSVI 68 Query: 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 + G R D L+R A YLV NGDP KP +AA Q+YFA++TR E Sbjct: 69 TEKAPEG---GRPRTDFHLNRLAAYLVAMNGDPNKPEVAAAQSYFALRTREAETKPSFDP 125 Query: 125 KQLREDE------KRLFLRNELKEHNKQLVEAAQ-------QAGVATATDFAIFQNHGYQ 171 L E R L+ NK+L A+ G + A G Sbjct: 126 AALTRAEILQIALNAEEERLALEAENKELSPKAEAYDTFLDATGKYSVGAVAKMLGKGQN 185 Query: 172 GLYGGLDQKAIHQRKGLKKNQKILDHMGSTEL 203 L+ L + + KG +N +M E+ Sbjct: 186 WLFRELRNRGVLITKGAMRNTPYQQYMHHFEV 217 >UniRef50_Q8G7T6 DNA-damage-inducible protein of Escherichia coli n=3 Tax=Bifidobacterium longum RepID=Q8G7T6_BIFLO Length = 187 Score = 186 bits (472), Expect = 7e-46, Method: Composition-based stats. Identities = 58/156 (37%), Positives = 85/156 (54%), Gaps = 5/156 (3%) Query: 14 INANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSN 73 + E W AR+L +GY + +F +TRAK+AC+NSG +++ HF + V +GS Sbjct: 20 TEDSKVEYWYARELMTYMGYDRWENFSKAITRAKQACDNSGVSVESHFRDTTRDVTLGSG 79 Query: 74 AKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFKQLREDEKR 133 A R++ D+ L+RYACYL+ QNGDP K +A Q+YFA+QTR+ E+ + + R Sbjct: 80 ATRSIADVKLTRYACYLIAQNGDPKKEEVALLQSYFAVQTRKTEIIEQRM-----GEISR 134 Query: 134 LFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHG 169 L R L K+L Q TA + NH Sbjct: 135 LAGREALATAEKKLYPYTQITHNKTAQEHMYTPNHA 170 >UniRef50_Q3ARJ2 Putative uncharacterized protein n=14 Tax=Bacteria RepID=Q3ARJ2_CHLCH Length = 412 Score = 183 bits (464), Expect = 6e-45, Method: Composition-based stats. Identities = 69/163 (42%), Positives = 94/163 (57%), Gaps = 1/163 (0%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 ++H FE+I+ + NG E WSAR L K+L YSE+RHF+PV+ R KEAC NSG I DHF Sbjct: 7 HQHIGLFEKIRQTDENGNEFWSARDLSKVLEYSEFRHFLPVIERGKEACINSGQQIADHF 66 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 E+IL+M+ R ++ I LSRYACYL+VQN D K V+A GQTYFA + Q L Sbjct: 67 EDILEMITTDKTEHREIEGIKLSRYACYLIVQNADHGKEVVALGQTYFANLSNIQLLNKS 126 Query: 122 EAFKQLRE-DEKRLFLRNELKEHNKQLVEAAQQAGVATATDFA 163 K + + +++ L +L + +QA F Sbjct: 127 RISKFIYTIEGQQIILDRDLAMLYQTDTRTLKQAVKRNIERFP 169 >UniRef50_Q31Q71 DNA-damage-inducible protein n=2 Tax=Synechococcus elongatus RepID=Q31Q71_SYNE7 Length = 215 Score = 182 bits (461), Expect = 1e-44, Method: Composition-based stats. Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 14/203 (6%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ I+ + NG E W+ R+L L Y ++HF + RA +C+ G + DHF + Sbjct: 3 SPFDSIRHV-ENGQEFWNGRELMGFLDYPHWQHFTNAIDRAIISCQRRGKHVADHFSRTI 61 Query: 66 DMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAFK 125 K G R +D LSR A YLV N DP K +AA Q YF ++ R E D +A Sbjct: 62 TKFKTG---GRPREDYRLSRLAAYLVAMNSDPRKRSVAAAQEYFYLRIRESEERDQKALP 118 Query: 126 QLREDEKR-LFLRNELK-----EHNKQLVEAAQQAGVATATDFAIFQNHGY---QGLYGG 176 + + LR + N+ Q+ A TD + + + Q +Y Sbjct: 119 TAALPTSQPVPLRRKTTAPADWHRNRDESGRFTQSNPAAKTDAELLSDFQFGMVQAIYAL 178 Query: 177 LDQKAIHQRKGL-KKNQKILDHM 198 + + + L K+ + + + Sbjct: 179 SQINRLSRDRSLAKQADTLCNWL 201 >UniRef50_A6LGB1 Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LGB1_PARD8 Length = 168 Score = 178 bits (450), Expect = 2e-43, Method: Composition-based stats. Identities = 58/148 (39%), Positives = 88/148 (59%), Gaps = 7/148 (4%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIP-VLTRAKEACENSGHTIDDHFEEI 64 FE I G E WSAR+L LLGY+++ +FI V+ +AKEAC N+G + +HF ++ Sbjct: 11 GKFESISCEVE-GIECWSARELQPLLGYAKWDNFINNVVVKAKEACRNAGEDVQNHFPDV 69 Query: 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 MV IG ++ + DI+L+RYACYL+ QNGD K +A QTYFA+QTR+ E+ + Sbjct: 70 GKMVSIGYGVEKQIDDILLTRYACYLIAQNGDSRKLQVAFAQTYFAVQTRKAEVIEQRLL 129 Query: 125 K-----QLREDEKRLFLRNELKEHNKQL 147 Q +RL ++K+ +++ Sbjct: 130 DCDMLLQRGIKPERLSPDEDIKKVQRRI 157 >UniRef50_B5GKB1 Predicted protein n=3 Tax=Streptomyces RepID=B5GKB1_9ACTO Length = 337 Score = 177 bits (448), Expect = 5e-43, Method: Composition-based stats. Identities = 60/122 (49%), Positives = 72/122 (59%) Query: 4 HHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEE 63 PF+ + A+GA+ WSAR L +LLGY + F + RA ACENSGH DHF Sbjct: 62 SRSPFDATRNTRADGADFWSARDLQELLGYERWERFETAVERAIAACENSGHEPKDHFRG 121 Query: 64 ILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEA 123 V +GS A RA+ D LSRYA YLV NGDP K IAA QTYFA++TR E+A A Sbjct: 122 AAKKVSLGSGATRAVIDWHLSRYAAYLVAMNGDPRKDQIAAAQTYFAVKTREAEIAATRA 181 Query: 124 FK 125 Sbjct: 182 PA 183 >UniRef50_Q8YL03 DNA-damage-inducible protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YL03_ANASP Length = 266 Score = 168 bits (424), Expect = 3e-40, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 65/124 (52%), Gaps = 4/124 (3%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 + PF++I+ I+ +G E W AR L +LGY ++R + RA AC+N G ++HF Sbjct: 9 SNTDSPFDQIRKIDDDGTEYWLARDLMPILGYQQWRRLEDAINRAIAACKNIGQESENHF 68 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADD 121 + S R D LSR+ CYL NGD KP IAA Q YFA++TR ELA Sbjct: 69 L----PMPAKSTGGRPGDDFKLSRHGCYLTAMNGDSRKPEIAAAQNYFAVKTREAELAPQ 124 Query: 122 EAFK 125 Sbjct: 125 SQEL 128 >UniRef50_Q855G1 Gp49 n=2 Tax=unclassified Siphoviridae RepID=Q855G1_9CAUD Length = 288 Score = 159 bits (402), Expect = 9e-38, Method: Composition-based stats. Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 22/212 (10%) Query: 6 QPFEEIKLINANGAE-QWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEI 64 PF+ ++ G E +WSAR L + +GYS ++ F P++ RAK A + G + F + Sbjct: 11 SPFDAGRIPCPQGGEDRWSARWLMEQMGYSSWQKFEPIIERAKTAAASEGFNVRTLFTQT 70 Query: 65 LDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 + R D ++R+A YL+ NG P+KP +AA QTYFA++TR+ E+ A Sbjct: 71 VK-----KTGGRPETDYHVTRFAAYLIAMNGQPSKPEVAAAQTYFAVKTRQAEV--QPAI 123 Query: 125 KQLREDEKRLFLRNELKEHNKQLVEAAQQAGV-------------ATATDFAIFQNHGYQ 171 + E L + + ++LV + + + Q Sbjct: 124 PDITTPEGLLAMTEMFADTARKLVAVESEKKMLAAAIERDAPLVAKAEAHTGSDSDVHRQ 183 Query: 172 GLYGGLDQKAIHQRKGLKKNQKILDHMGSTEL 203 + Q +K+ + +G L Sbjct: 184 EFAREVQAWGTKQGIEIKQADVL-RFLGHIGL 214 >UniRef50_Q87CK5 DNA-damage-inducible protein D n=5 Tax=Xylella fastidiosa RepID=Q87CK5_XYLFT Length = 186 Score = 157 bits (397), Expect = 3e-37, Method: Composition-based stats. Identities = 59/192 (30%), Positives = 91/192 (47%), Gaps = 15/192 (7%) Query: 47 KEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQ 106 AC G + F ++V+ G +A+K LSR+AC LV D KP +A + Sbjct: 1 MGACSRLGLDPTEAFVR-EEIVQDG----KAIKTYQLSRFACLLVSMTADSKKPEVARAK 55 Query: 107 TYFAIQTRRQELADDEAFKQL-REDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIF 165 T A +A+ +++ ED RL R +LK K + AA+ G+ A F IF Sbjct: 56 TILAA------IANTLIEQRIQSEDLARLETREDLKFGEKAMTSAAKDGGLQNAE-FGIF 108 Query: 166 QNHGYQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSK 225 ++ G++G+Y + + + K L + + D MG ELA NLFR TQT +++ V + Sbjct: 109 KDAGFRGMYN-MSLRELQHYKRLPNGKTLYDFMGLEELAGNLFRVTQTAARIRNKDVI-R 166 Query: 226 QQANTTHFDVGR 237 H GR Sbjct: 167 TTTTLKHCPTGR 178 >UniRef50_Q4UXE8 DNA-damage-inducible protein d n=3 Tax=Xanthomonas campestris pv. campestris RepID=Q4UXE8_XANC8 Length = 286 Score = 145 bits (365), Expect = 2e-33, Method: Composition-based stats. Identities = 92/150 (61%), Positives = 116/150 (77%) Query: 120 DDEAFKQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATATDFAIFQNHGYQGLYGGLDQ 179 + F L E+++RLFLR+++ +HNK L AA+QAGV T ++A+FQ+HGY+GLYGGL Sbjct: 127 EAVDFDALSENQRRLFLRDQMSQHNKDLAAAAKQAGVETPLEYAVFQDHGYKGLYGGLGA 186 Query: 180 KAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKV 239 K IH RK LKK+Q ILDHMGSTELAANLFRATQ EEKL+RD V K AN TH +VG+ V Sbjct: 187 KDIHARKALKKSQTILDHMGSTELAANLFRATQAEEKLRRDNVQGKTAANRTHLEVGQTV 246 Query: 240 RQTIQELGGTMPEELPTPQVSIKQLENSVK 269 R+TIQELGGT+PE LP P+ SIK+L+ + Sbjct: 247 RKTIQELGGTLPENLPAPETSIKRLQKDAR 276 >UniRef50_D1WWQ4 Putative uncharacterized protein n=1 Tax=Streptomyces sp. ACT-1 RepID=D1WWQ4_9ACTO Length = 306 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 3/121 (2%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEIL 65 PF+ I+ + +G E WSAR+L LLGY ++ F + +A+ E ++ E L Sbjct: 15 SPFDSIRRLREDGVEYWSARELMPLLGYKKWERFADAVEQARSVIEAENGSLAAEQEASL 74 Query: 66 DMVKIGSNAKRALKD-IVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTRRQELADDEAF 124 G R + D LSR A YL GD KP I A YFA +TR EL F Sbjct: 75 QREAFGRT--RQIGDNYWLSRRASYLTAMRGDSRKPEIRAALIYFANRTREAELGHASQF 132 Query: 125 K 125 Sbjct: 133 S 133 >UniRef50_Q1NLV0 Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NLV0_9DELT Length = 189 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 7/130 (5%) Query: 150 AAQQAGVATATDFAIFQNHGYQGL-----YGGLDQKAIHQRKGLKKNQKILDHMGSTELA 204 A + + + + ++G+ GG + + R G+ K + + D + + +A Sbjct: 47 TAIKRAIESCETTGYKADDHFRGVTKMIEIGGHTTQVMKDRYGITKTRPLADFLPTLTIA 106 Query: 205 ANLFRATQTEEKLKRDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQL 264 A T ++++ + +Q + H VR + + G PE+LP P+ I +L Sbjct: 107 AKNLATEMTNHNVRQEDLRGEQAITSEHVQNNVSVRDMLGQR-GIKPEKLP-PEEDIGKL 164 Query: 265 ENSVKITEKK 274 E VK EKK Sbjct: 165 ERRVKAEEKK 174 Score = 90.2 bits (222), Expect = 7e-17, Method: Composition-based stats. Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Query: 8 FEEIKLI-NANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILD 66 F+ + E W AR L LGY+ + +F+ + RA E+CE +G+ DDHF + Sbjct: 13 FDGLSSTLPDENVEFWFARDLMAPLGYARWENFLTAIKRAIESCETTGYKADDHFRGVTK 72 Query: 67 MVKIGSNAKRALKD 80 M++IG + + +KD Sbjct: 73 MIEIGGHTTQVMKD 86 >UniRef50_C0A9A6 DNA-damage-inducible protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9A6_9BACT Length = 116 Score = 118 bits (296), Expect = 2e-25, Method: Composition-based stats. Identities = 54/99 (54%), Positives = 78/99 (78%), Gaps = 5/99 (5%) Query: 48 EACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQT 107 ++C NSG ++DHF E+ DMV IGS A+R LK +++SRYACYLV+QN DPAK ++A GQT Sbjct: 10 QSCFNSGQRVEDHFVEVTDMVGIGSGARRPLKTVMMSRYACYLVIQNADPAKEIVAQGQT 69 Query: 108 YFAIQTRRQELADDEAFKQLREDEKRLFLRNELKEHNKQ 146 YFA+QTRRQEL+D++ E+++RL +R++L+ HN + Sbjct: 70 YFALQTRRQELSDEQV-----EEQRRLAIRSDLRRHNSR 103 >UniRef50_Q3R926 Putative uncharacterized protein n=2 Tax=Xylella fastidiosa RepID=Q3R926_XYLFA Length = 107 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 7/105 (6%) Query: 2 NEHHQPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHF 61 N + FE W A QL + LGY ++ F V+T+A AC G + F Sbjct: 3 NLSIEIFENGGQEGE--TRFWYAHQLMQWLGYESWQAFQNVITKAMGACSRLGLDPTEAF 60 Query: 62 EEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQ 106 ++V+ G +A+K LSR+AC LV D KP G+ Sbjct: 61 VR-EEIVQDG----KAIKTYQLSRFACLLVSMTADSKKPNSGLGE 100 >UniRef50_C7GZC8 DNA-damage-inducible protein D n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZC8_9FIRM Length = 135 Score = 98.7 bits (244), Expect = 2e-19, Method: Composition-based stats. Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 1/78 (1%) Query: 27 LGKLLGYSEYRHFIPVLTRAKEACENSGHTIDDHFEEILDMVKIGSNAKRALKDIVLSRY 86 L L+ S F V+ AC SGH + F E+ +V G+ + +++KD L+RY Sbjct: 16 LMYLIILSGETFFQKVINGEMIACATSGHEVTSDFAEVGKIVDAGATS-KSIKDYELTRY 74 Query: 87 ACYLVVQNGDPAKPVIAA 104 ACYL+VQNGDP K V +A Sbjct: 75 ACYLIVQNGDPRKEVRSA 92 Score = 41.7 bits (96), Expect = 0.026, Method: Composition-based stats. Identities = 16/30 (53%), Positives = 25/30 (83%) Query: 237 RKVRQTIQELGGTMPEELPTPQVSIKQLEN 266 ++VR I+++GGTMPE+LP P+ SI+Q+E Sbjct: 87 KEVRSAIEKIGGTMPEDLPVPEKSIQQIEK 116 >UniRef50_C6YZL5 Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_3_47FAA RepID=C6YZL5_9BACE Length = 85 Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 35/55 (63%) Query: 60 HFEEILDMVKIGSNAKRALKDIVLSRYACYLVVQNGDPAKPVIAAGQTYFAIQTR 114 HF ++ MV +GS A+R + DI +RYACYL QNGD KP IA Q Y+ + R Sbjct: 4 HFADVSKMVSVGSGAEREIDDIYFTRYACYLTAQNGDARKPAIAFAQNYYDGKPR 58 >UniRef50_B0VG66 Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VG66_9BACT Length = 81 Score = 70.9 bits (172), Expect = 4e-11, Method: Composition-based stats. Identities = 5/64 (7%), Positives = 26/64 (40%) Query: 170 YQGLYGGLDQKAIHQRKGLKKNQKILDHMGSTELAANLFRATQTEEKLKRDGVNSKQQAN 229 + L+GG++ + + ++ + + + D + + + + T + + ++ Sbjct: 18 DEALFGGINTQEMKRKLNIPISGPLADFLPTITIKSKDLATKITSHNIIVKDLICLPNSD 77 Query: 230 TTHF 233 ++ Sbjct: 78 LSNC 81 >UniRef50_A1WQG7 Putative uncharacterized protein n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WQG7_VEREI Length = 67 Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 20/38 (52%) Query: 6 QPFEEIKLINANGAEQWSARQLGKLLGYSEYRHFIPVL 43 FE G E W AR L LLGY+E+R+F V+ Sbjct: 11 STFEGHAQQTDGGVEYWLARDLQHLLGYAEWRNFGTVI 48 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.308 0.127 0.332 Lambda K H 0.267 0.0392 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,311,275,086 Number of Sequences: 3077464 Number of extensions: 42904793 Number of successful extensions: 143567 Number of sequences better than 1.0e-01: 34 Number of HSP's better than 0.1 without gapping: 96 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 143312 Number of HSP's gapped (non-prelim): 116 length of query: 274 length of database: 1,040,396,356 effective HSP length: 127 effective length of query: 147 effective length of database: 649,558,428 effective search space: 95485088916 effective search space used: 95485088916 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 92 (40.1 bits)