BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (139 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=... 280 1e-74 UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX 162 3e-39 UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S2... 153 2e-36 UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enter... 147 1e-34 UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ 145 4e-34 UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas ... 144 7e-34 UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A... 144 8e-34 UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=... 144 9e-34 UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Ser... 143 1e-33 UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Ta... 143 2e-33 UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID... 137 1e-31 UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=... 134 9e-31 UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=... 133 2e-30 UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepI... 131 5e-30 UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA... 131 7e-30 UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legione... 129 3e-29 UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S2... 128 5e-29 UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S2... 125 3e-28 UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria Re... 125 6e-28 UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 ... 124 7e-28 UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S2... 124 8e-28 UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX 124 1e-27 UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM 123 1e-27 UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZE... 122 4e-27 UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=B... 122 5e-27 UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Met... 121 6e-27 UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterob... 120 2e-26 UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleoba... 119 2e-26 UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=u... 119 2e-26 UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Des... 117 9e-26 UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta ... 117 9e-26 UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synech... 117 1e-25 UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S2... 115 3e-25 UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S2... 115 6e-25 UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methy... 114 9e-25 UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S2... 114 1e-24 UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S2... 114 1e-24 UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Met... 113 2e-24 UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonen... 113 2e-24 UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=... 113 2e-24 UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cel... 112 4e-24 UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Des... 111 9e-24 UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-me... 110 1e-23 UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1... 110 1e-23 UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Met... 110 2e-23 UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nit... 109 3e-23 UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 1385... 109 3e-23 UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria ... 109 3e-23 UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=A... 109 3e-23 UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Le... 108 4e-23 UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=... 108 4e-23 UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2... 108 6e-23 UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD... 108 6e-23 UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kan... 108 7e-23 UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synech... 108 7e-23 UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 ... 108 7e-23 UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus ... 108 7e-23 UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sid... 107 9e-23 UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group Re... 107 1e-22 UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1... 107 1e-22 UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 ... 106 2e-22 UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7J... 105 5e-22 UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n... 105 5e-22 UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. P... 104 1e-21 UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Des... 100 1e-20 UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular orga... 100 2e-20 UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S2... 99 3e-20 UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 99 5e-20 UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=... 98 8e-20 UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax... 97 2e-19 UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Ps... 96 4e-19 UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gal... 96 5e-19 UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thi... 95 6e-19 UniRef50_B4TAQ3 DNA polymerase V subunit n=11 Tax=root RepID=B4T... 94 1e-18 UniRef50_A9L6E3 Peptidase S24 and S26 domain protein n=39 Tax=Ga... 94 2e-18 UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Ch... 94 2e-18 UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria ... 94 2e-18 UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=... 94 2e-18 UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Bei... 93 3e-18 UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S2... 93 3e-18 UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Met... 92 4e-18 UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_... 89 5e-17 UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor... 86 4e-16 UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=S... 86 4e-16 UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophic... 85 8e-16 UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Ch... 85 9e-16 UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID... 84 1e-15 UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8... 84 1e-15 UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter viola... 84 2e-15 UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum... 84 2e-15 UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohaloba... 84 2e-15 UniRef50_A3XM66 SOS-response transcriptional repressors (RecA-me... 83 3e-15 UniRef50_A0L3I3 Putative prophage repressor n=1 Tax=Shewanella s... 83 3e-15 UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET... 82 5e-15 UniRef50_Q8P6K4 Polymerase V subunit n=2 Tax=Xanthomonas RepID=Q... 81 8e-15 UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n... 81 8e-15 UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=... 81 1e-14 UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni ... 81 1e-14 UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA... 80 1e-14 UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein ... 80 3e-14 UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LE... 79 3e-14 UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed t... 79 4e-14 UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S2... 79 5e-14 UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus... 78 7e-14 UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus acid... 78 7e-14 UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydan... 78 7e-14 UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteri... 77 1e-13 UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB1... 76 3e-13 UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovoru... 74 1e-12 UniRef50_B2UKF5 Peptidase S24 and S26 domain protein n=2 Tax=Ral... 72 5e-12 UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein ... 72 7e-12 UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus D... 72 7e-12 UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=... 71 9e-12 UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Al... 71 1e-11 UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellat... 71 1e-11 UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID... 71 1e-11 UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophil... 70 2e-11 UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I... 70 2e-11 UniRef50_A9KZQ7 Putative uncharacterized protein n=2 Tax=Shewane... 69 3e-11 UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans ... 69 4e-11 UniRef50_A2TQY9 SOS-response transcriptional repressors (RecA-me... 69 4e-11 UniRef50_C3X958 DNA polymerase V n=1 Tax=Oxalobacter formigenes ... 69 5e-11 UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12... 68 7e-11 UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans... 68 8e-11 UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 68 8e-11 UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 68 1e-10 UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTC... 67 1e-10 UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 Re... 67 1e-10 UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEX... 67 2e-10 UniRef50_UPI0000382BE7 COG1974: SOS-response transcriptional rep... 67 2e-10 UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum R... 67 2e-10 UniRef50_Q2Y5T8 Putative prophage repressor n=1 Tax=Nitrosospira... 67 2e-10 UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducen... 67 3e-10 UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR 66 3e-10 UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 R... 66 3e-10 UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEX... 66 3e-10 UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA... 66 3e-10 UniRef50_A6ET81 Peptidase, S24 family, UV repair protein n=1 Tax... 65 4e-10 UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium ... 65 6e-10 UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_A... 65 6e-10 UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID... 65 8e-10 UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes ... 65 9e-10 UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxid... 65 9e-10 UniRef50_B0C5G0 SOS mutagenesis protein UmuD, putative n=1 Tax=A... 65 9e-10 UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM 65 1e-09 UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sorda... 64 2e-09 UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232... 64 2e-09 UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazo... 63 3e-09 UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modestical... 63 3e-09 UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=... 63 3e-09 UniRef50_A3SCV4 UmuD protein n=1 Tax=Sulfitobacter sp. EE-36 Rep... 63 3e-09 UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEX... 63 4e-09 UniRef50_UPI00016C36BD LexA repressor n=2 Tax=Gemmata obscuriglo... 62 5e-09 UniRef50_A7MJJ4 Putative uncharacterized protein n=1 Tax=Cronoba... 62 5e-09 UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_... 62 6e-09 UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP 62 8e-09 UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0S... 61 9e-09 UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF13... 61 9e-09 UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 70012... 61 1e-08 UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE 61 1e-08 UniRef50_UPI0001BC9EB9 ultraviolet light resistance protein A n=... 61 1e-08 UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LE... 60 2e-08 UniRef50_D2QCM1 SOS-response transcriptional repressors (RecA-me... 60 2e-08 UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR... 60 2e-08 UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM 60 3e-08 UniRef50_Q4ZV62 Peptidase S24, S26A and S26B n=6 Tax=Pseudomonas... 60 3e-08 UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivora... 60 3e-08 UniRef50_D0S989 SOS-response transcriptional repressor n=2 Tax=A... 60 3e-08 UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_... 59 4e-08 UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae Rep... 59 4e-08 UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepI... 59 5e-08 UniRef50_B5IKI1 LexA repressor, putative n=1 Tax=Cyanobium sp. P... 59 6e-08 UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 87... 58 8e-08 UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9... 58 9e-08 UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus... 58 1e-07 UniRef50_D1R7F0 LexA repressor n=1 Tax=Parachlamydia acanthamoeb... 58 1e-07 UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkeniv... 58 1e-07 UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostri... 57 1e-07 UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LE... 57 2e-07 UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Th... 57 2e-07 UniRef50_Q0I454 ImpA protein n=8 Tax=Pasteurellaceae RepID=Q0I45... 57 2e-07 UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicu... 57 2e-07 UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus D... 57 2e-07 UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=B... 57 2e-07 UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID... 56 4e-07 UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE1... 56 5e-07 UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN 55 5e-07 UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7... 55 6e-07 UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_... 55 6e-07 UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) Re... 55 8e-07 UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) R... 55 9e-07 UniRef50_A7I013 Putative uncharacterized protein n=1 Tax=Campylo... 55 1e-06 UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum ... 55 1e-06 UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=A... 54 1e-06 UniRef50_B3DST2 SOS-response transcriptional repressor n=6 Tax=B... 54 1e-06 UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N44... 54 1e-06 UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaeroc... 54 1e-06 UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=H... 54 2e-06 UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepI... 54 2e-06 UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans ... 54 2e-06 UniRef50_C0WR03 Bifunctional S24 family peptidase/transcriptiona... 54 2e-06 UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T... 53 3e-06 UniRef50_B9XRF1 SOS-response transcriptional repressor, LexA n=2... 53 3e-06 UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID... 53 3e-06 UniRef50_P97845 RvuZ homolog (Fragment) n=1 Tax=Rattus norvegicu... 53 3e-06 UniRef50_C1D6P9 Transcriptional regulator n=2 Tax=Betaproteobact... 53 3e-06 UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-E... 53 3e-06 UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 ... 52 7e-06 UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepI... 52 8e-06 UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD 51 1e-05 UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEX... 51 1e-05 UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH... 51 1e-05 UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D... 51 1e-05 UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminoc... 50 2e-05 UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clo... 50 2e-05 UniRef50_UPI0001C171EB SOS-response transcriptional repressor, L... 50 2e-05 UniRef50_UPI000196B9BA hypothetical protein CATMIT_01071 n=1 Tax... 50 3e-05 UniRef50_A3ZYP5 LexA repressor n=2 Tax=Planctomycetaceae RepID=A... 50 3e-05 UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepI... 50 3e-05 UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae ... 49 3e-05 UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteol... 49 4e-05 UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7... 49 4e-05 UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens R... 49 5e-05 UniRef50_Q72P22 Transcriptional repressor (LexA family) n=1 Tax=... 49 5e-05 UniRef50_Q8VV87 LexA repressor-like protein n=1 Tax=Terrabacter ... 49 5e-05 UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaeros... 49 5e-05 UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ 49 6e-05 UniRef50_B0BTB1 SOS-response transcriptional repressors/RecA-med... 49 7e-05 UniRef50_Q3ZL55 Transcriptional regulator n=1 Tax=Escherichia bl... 48 8e-05 UniRef50_C4ZMS9 Putative uncharacterized protein n=1 Tax=Thauera... 48 9e-05 UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus dese... 48 1e-04 UniRef50_Q6MBQ6 Putative SOS response regulator lexA n=1 Tax=Can... 48 1e-04 UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_... 48 1e-04 UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA... 48 1e-04 UniRef50_Q2BYQ0 UmuD protein n=2 Tax=Photobacterium RepID=Q2BYQ0... 47 1e-04 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 47 1e-04 UniRef50_A8RF32 Putative uncharacterized protein n=1 Tax=Eubacte... 47 1e-04 UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein ... 47 2e-04 UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Pa... 46 3e-04 UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 46 3e-04 UniRef50_UPI0001C34D6D SOS-response transcriptional repressors n... 46 3e-04 UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA... 46 4e-04 UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5F... 46 4e-04 UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=R... 46 4e-04 UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=... 46 4e-04 UniRef50_C3XGR1 Putative uncharacterized protein n=1 Tax=Helicob... 46 5e-04 UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM 46 5e-04 UniRef50_D2R3E9 SOS-response transcriptional repressor, LexA n=1... 46 5e-04 UniRef50_C8Q8N5 Putative uncharacterized protein n=1 Tax=Pantoea... 45 5e-04 UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 1... 45 5e-04 >UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=UMUD_ECO57 Length = 139 Score = 280 bits (716), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS Sbjct: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS Sbjct: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 SEDTLDVFGVVIHVVKAMR Sbjct: 121 SEDTLDVFGVVIHVVKAMR 139 >UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX Length = 149 Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 79/139 (56%), Positives = 98/139 (70%), Gaps = 4/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 + FIK LR PLF + V GFPSPA DYVEQ +DLN+L I+ P+AT+FV+ GDS Sbjct: 12 LAFIKAKRLR----IPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDS 67 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 MID GI D+L+VD ++ A HGDIVIA + GE TVK+LQLRP V+LIP N AY PI I Sbjct: 68 MIDAGIHPDDILVVDRSVQAEHGDIVIAGIHGELTVKELQLRPCVKLIPRNQAYEPIHIP 127 Query: 121 SEDTLDVFGVVIHVVKAMR 139 L++FGVV +VV+ MR Sbjct: 128 EGAELEIFGVVTNVVRNMR 146 >UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Gammaproteobacteria RepID=A1WWJ0_HALHL Length = 142 Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 73/135 (54%), Positives = 100/135 (74%), Gaps = 4/135 (2%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 +PA LR PLF + V GFPSPA DYV++ +DLN+L I+HP+ATYFV+A+G+SM+ Sbjct: 12 EPAALRR----PLFLERVAAGFPSPAQDYVDRALDLNELCIEHPAATYFVRAAGESMLGV 67 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDT 124 GI GD+L+VD A+ A H DIVIAA GE TVK+L+LRPT++L+ N A+ PI I+ + Sbjct: 68 GIHPGDVLVVDRALEARHRDIVIAAWQGELTVKRLELRPTLRLVAENDAFPPIDIAEPEM 127 Query: 125 LDVFGVVIHVVKAMR 139 L++FGVV V+ A+R Sbjct: 128 LEIFGVVTFVIHALR 142 >UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enterobacteriaceae RepID=Q8L2B9_PROVU Length = 138 Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 69/129 (53%), Positives = 93/129 (72%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +L + P F L+ GFPSPA+DY + IDLN+LLI HP+ TYF++ SG SMID I Sbjct: 6 CELPAGIKLPFFEALIPAGFPSPASDYSKNNIDLNELLITHPAGTYFLRVSGTSMIDANI 65 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 SDGD++IVDS++ A+ G+IVIA++DGEFTVK+LQ P LIPMN +SPI I S + Sbjct: 66 SDGDIVIVDSSLQANDGNIVIASIDGEFTVKQLQKTPFPALIPMNPDFSPIPIPSGSEFN 125 Query: 127 VFGVVIHVV 135 +FGVV +++ Sbjct: 126 LFGVVTYII 134 >UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ Length = 143 Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 68/125 (54%), Positives = 90/125 (72%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PLF + V CGFPSPA DYVE+R+ L+ I HP+ATYF++ASG+SM GI DGDLL+V Sbjct: 19 LPLFLEKVACGFPSPAQDYVEKRVSLDAHCIVHPNATYFLRASGESMNGAGIEDGDLLVV 78 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 DSA+ DIV+AA++GEFTVK L+L P QL+PMN ++PI + + + +FGVV V Sbjct: 79 DSALKPQENDIVVAALEGEFTVKTLRLHPVAQLVPMNPDFAPIPLVGDADVVIFGVVTWV 138 Query: 135 VKAMR 139 +K R Sbjct: 139 LKKRR 143 >UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas RepID=A3YBK7_9GAMM Length = 149 Score = 144 bits (364), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 91/127 (71%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V P + + V GFPSPA D++E+++DLN L I+HP AT+FV+ G+SM + GI + D+L Sbjct: 20 VQIPFYVEPVSAGFPSPADDFIERKLDLNALCIKHPEATFFVRVQGESMSEAGIYNHDVL 79 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 IVD ++TA HGD VIA + GE TVK+L L+P V L P N AY+ I I+ E LDVFGVVI Sbjct: 80 IVDRSLTARHGDFVIACIHGEMTVKELVLKPNVALRPKNKAYAAIAITEESELDVFGVVI 139 Query: 133 HVVKAMR 139 VV+ ++ Sbjct: 140 SVVRNIQ 146 >UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A0KH65_AERHH Length = 147 Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust. Identities = 65/127 (51%), Positives = 92/127 (72%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT PLF CGFPSPA+DY+E ++DLN + HP+AT++++A G+SM GI GDLL Sbjct: 13 VTIPLFLHRASCGFPSPASDYLEGKLDLNTHCVPHPAATFYLRAEGESMTRVGIFPGDLL 72 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +VD ++T HGD+VIA +DG FTVK LQL+P ++L+P N A++PI +L++FGVV Sbjct: 73 VVDKSLTPRHGDVVIALLDGGFTVKTLQLKPRLRLLPANPAFAPIDPCMSLSLELFGVVT 132 Query: 133 HVVKAMR 139 HV+ +R Sbjct: 133 HVIGNLR 139 >UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=Enterobacteriaceae RepID=C8T455_KLEPR Length = 148 Score = 144 bits (363), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 74/124 (59%), Positives = 88/124 (70%), Gaps = 3/124 (2%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PLFS+ GFPSPA DYVEQ +DLN L I+HPSATYF++ASG+SM D G+ DGD+LIVD Sbjct: 25 PLFSEACPAGFPSPAGDYVEQELDLNTLCIRHPSATYFLRASGESMRDIGLHDGDILIVD 84 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A TA GDIVIA +D FTVK+L+LRP L PMN Y T+ E TL +FGVV H + Sbjct: 85 RAETAQEGDIVIAEIDRGFTVKRLRLRPRPALEPMNPDYP--TLYPE-TLTLFGVVTHFI 141 Query: 136 KAMR 139 R Sbjct: 142 HRTR 145 >UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GF16_SERP5 Length = 140 Score = 143 bits (361), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 70/139 (50%), Positives = 95/139 (68%), Gaps = 3/139 (2%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 F P ++ + PL++D V GFPSPA DY+ RIDLN+ I HPSATYF+ ASG+SM Sbjct: 4 FFPTPTPEKQFI--PLYADNVPAGFPSPAQDYIHARIDLNEYCISHPSATYFLIASGESM 61 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISS 121 I+ GI+DG +L+VD +I A HGDIVIA++ GEFTVK+L L P QL PMN + PI + Sbjct: 62 IEAGITDGSMLVVDRSIGACHGDIVIASIAGEFTVKRLCLHPVKQLEPMNPTFRPIPLPD 121 Query: 122 EDT-LDVFGVVIHVVKAMR 139 + LD+ GVV+ + ++ Sbjct: 122 DGAELDIVGVVVSTITRLK 140 >UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Tax=Bacteria RepID=D0KZ55_HALNC Length = 243 Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 1/139 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ ++PA + ++T PLF + GFPSPA DYVE+RIDLN+ LI+H AT+F++ GDS Sbjct: 104 LIPLQPATVAPVLTLPLFGYRIAAGFPSPADDYVEERIDLNRHLIRHKEATFFLRVQGDS 163 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITI 119 MI+ GI DGD+LIVD AI G IVIAA+DGE TVK+L V+L+P N Y I I Sbjct: 164 MINAGIHDGDMLIVDRAIEPVSGKIVIAALDGELTVKRLSASGGVVRLLPENPDYPVIEI 223 Query: 120 SSEDTLDVFGVVIHVVKAM 138 +E L V+GVVIHV+ A+ Sbjct: 224 GAEQELVVWGVVIHVIHAL 242 >UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID=Q0VP67_ALCBS Length = 163 Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 96/135 (71%), Gaps = 3/135 (2%) Query: 7 ADLREIV--TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 A LR I + P FS+ V GFPSPA Y+++ +DLN+L I+HP++T+ ++ GDSM+D Sbjct: 21 ACLRCIAMSSLPFFSEPVSAGFPSPAQGYLDEHLDLNRLCIRHPASTFLLRVEGDSMVDA 80 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDT 124 GI GD+LIVD ++ A GD+V+A+++GEFTVK+LQL P L P N+AY+PI I E+ Sbjct: 81 GIYSGDILIVDRSLEAVAGDVVVASLEGEFTVKELQLLPVPMLKPRNAAYAPILI-GEEG 139 Query: 125 LDVFGVVIHVVKAMR 139 LD+FGVV + +R Sbjct: 140 LDLFGVVTFSLHTLR 154 >UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=IMPA_ECOLX Length = 145 Score = 134 bits (337), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 68/140 (48%), Positives = 92/140 (65%), Gaps = 3/140 (2%) Query: 2 LFIKPADLREIVTF--PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 ++ +PAD ++ PLF+D Q GFPSPA DY EQ +DLN I P+AT+F++ASG+ Sbjct: 4 VYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDLNSYCISRPAATFFLRASGE 63 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITI 119 SM G+ +GDLL+VD A HGDIVIA +DGEFTVK+L LRP L P++ + T+ Sbjct: 64 SMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSDSPEFRTL 123 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 E+ +FGVV HV+ R Sbjct: 124 YPENIC-IFGVVTHVIHRTR 142 >UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=SAMA_SALTY Length = 140 Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 67/139 (48%), Positives = 90/139 (64%), Gaps = 3/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L + P T PLF++ GFPSPAADY E+ +DLN I+ P+AT+FV+A GDS Sbjct: 2 LLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDS 61 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M + G+ GDL++VD A GDIVIA DGEFTVK+LQL+P + L+P+N AY T+ Sbjct: 62 MKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYP--TLY 119 Query: 121 SEDTLDVFGVVIHVVKAMR 139 E+ L +FGVV + R Sbjct: 120 PEE-LQIFGVVTAFIHKTR 137 >UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepID=C9Y1S5_CROTZ Length = 155 Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 64/127 (50%), Positives = 84/127 (66%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V P ++DL+ GFPSPAADY++ IDL LI HPS+TY ++ +GDSM D GI DG LL Sbjct: 23 VNIPFYADLISAGFPSPAADYIDSGIDLVSHLIAHPSSTYVLRVAGDSMRDAGILDGSLL 82 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +VD ++ A H DIV+A + GEFTVK+L P QL N AY PI + D L++ GVVI Sbjct: 83 LVDFSLHAKHNDIVVANIGGEFTVKRLVTYPVAQLRAENPAYPPIAVYDADDLEIVGVVI 142 Query: 133 HVVKAMR 139 V+ + Sbjct: 143 CVINTLH 149 >UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA) n=5 Tax=Legionellaceae RepID=Q5ZUT8_LEGPH Length = 184 Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 62/127 (48%), Positives = 90/127 (70%), Gaps = 1/127 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E PL++ V+ GFPSP DY+E +DLN+ LI+HP++T+FV+ASG+SMI+ GI G Sbjct: 54 KEFPAIPLYTSSVRAGFPSPGDDYIESMLDLNEYLIKHPASTFFVRASGESMINAGIYSG 113 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D+LIVD I A+HG IVI A++GE TVK+L + V+L+ N + PI I+ E + ++ Sbjct: 114 DILIVDRGIEATHGKIVIVALNGELTVKRLSRQHGQVKLLAENPDFPPIDITEEYDMVIW 173 Query: 129 GVVIHVV 135 GVV HV+ Sbjct: 174 GVVTHVI 180 >UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6J8_9GAMM Length = 182 Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 3/135 (2%) Query: 4 IKP--ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 IKP AD + PL++ VQ GFPSPA DYVE +DLNQ LI+HPSAT+ + A+G+SM Sbjct: 44 IKPFLADEYTTYSIPLYASKVQAGFPSPADDYVECSLDLNQALIRHPSATFILIAAGESM 103 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS 120 ID GI GD LIVD ++ A G IVIAA++GE TVK+L + VQL+P N + I I+ Sbjct: 104 IDAGIHPGDKLIVDRSVEAVDGKIVIAALEGELTVKRLSRKANRVQLLPANPKFKSIDIT 163 Query: 121 SEDTLDVFGVVIHVV 135 + + ++GVV++++ Sbjct: 164 EDSEMVIWGVVMNII 178 >UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S24 n=7 Tax=cellular organisms RepID=A1VAL5_DESVV Length = 202 Score = 128 bits (322), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 62/128 (48%), Positives = 93/128 (72%), Gaps = 3/128 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ PL V GFPSPA DY+++ +DLN +++HP+AT++V+ASG+SM+ G+ DGDLL Sbjct: 76 LSRPLMLSRVAAGFPSPADDYIDRSLDLNDHIVKHPAATFYVRASGESMLGAGVHDGDLL 135 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI--PMNSAYSPITISSEDTLDVFGV 130 +VD A+ G +VIAAVDGE TVK+L +R +L+ P N+AY P+ I+ + ++V+GV Sbjct: 136 VVDRALDPRPGRVVIAAVDGELTVKRL-VREGGRLLLAPENAAYPPLDITGREDVEVWGV 194 Query: 131 VIHVVKAM 138 V HVV A+ Sbjct: 195 VTHVVHAL 202 >UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Chlorobiaceae RepID=Q3B3L8_PELLD Length = 212 Score = 125 bits (315), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 ADL + PL V GFPSPA D++E +DLN+ L++HP AT++ + G SMI+ GI Sbjct: 79 ADLSVPLPLPLAETAVSAGFPSPAEDHLEVTLDLNRALVRHPDATFYARVKGSSMIEAGI 138 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTL 125 ++GD+L++D ++ A GDI + +DGEFTVK++ + V L+P NSAYSPI I E Sbjct: 139 AEGDILVIDRSLDAKEGDIALCFLDGEFTVKRIAMDDGVLMLMPENSAYSPIRIGEESDF 198 Query: 126 DVFGVVIHVVKAMR 139 V+G+V +V+ R Sbjct: 199 QVWGIVTYVIHKSR 212 >UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria RepID=Q1NXL8_9DELT Length = 145 Score = 125 bits (313), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 92/137 (67%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F + +DL+ PLFS V GFPSPA DYVE ++DLNQL++ HP+AT+FV+ +GDSMI Sbjct: 13 FDRQSDLKR----PLFSCGVSAGFPSPAEDYVEGQLDLNQLMVAHPAATFFVRVAGDSMI 68 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISS 121 GI D+L+VD ++ + G +VIA ++GE TVK+L + T +L+ N Y PI ++ Sbjct: 69 GAGIHHDDILVVDRSLEPTSGRVVIAVINGELTVKRLFRHNGTARLLAENPNYPPIELTE 128 Query: 122 EDTLDVFGVVIHVVKAM 138 E +V+GVV V+ ++ Sbjct: 129 EAACEVWGVVTFVIHSL 145 >UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PC11_9BACT Length = 152 Score = 124 bits (312), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 62/137 (45%), Positives = 87/137 (63%), Gaps = 3/137 (2%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L PA+ + PL V+ GFPSPA DY+E IDLN +L++H AT++V+ SGDSM Sbjct: 11 LTFHPAEFGAKMPIPLAEQSVKAGFPSPAQDYMEGEIDLNDILVRHREATFYVRISGDSM 70 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---VQLIPMNSAYSPIT 118 D GI DGDL +VD I S+G+ VIA VDGEFT+K+ ++ + LIP N +SPI Sbjct: 71 QDAGILDGDLAVVDRQIEPSNGNFVIAFVDGEFTIKQFKIDESGTFGWLIPWNKNFSPIR 130 Query: 119 ISSEDTLDVFGVVIHVV 135 + + ++GVV +V+ Sbjct: 131 VDETNRFMIWGVVTYVI 147 >UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Bacteria RepID=Q31HB9_THICR Length = 206 Score = 124 bits (312), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 1/136 (0%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L I+ + E V PL S V GFPSPA DYVE R+DLN LIQ+ AT+ + GDSM Sbjct: 69 LQIQLPEFNEEVLLPLHSHKVVAGFPSPADDYVETRLDLNDKLIQNKQATFLLTVQGDSM 128 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS 120 GI DGD+L+VD ++T G IVIAA+DGE TVK L ++ T L+P N Y PI + Sbjct: 129 KKAGIQDGDILVVDRSLTPQDGKIVIAALDGELTVKTLSIKSTGTWLVPENDNYPPIPVR 188 Query: 121 SEDTLDVFGVVIHVVK 136 E + ++GVV +K Sbjct: 189 EESDIVIWGVVTATIK 204 >UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX Length = 146 Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 56/124 (45%), Positives = 85/124 (68%), Gaps = 1/124 (0%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + P + + GFPSPA Y +Q ++L++ ++HPSATYF++ SG SM DG I DGD Sbjct: 13 RVHSIPFYLQRISAGFPSPAQGYEKQELNLHEYCVRHPSATYFLRVSGSSMEDGRIHDGD 72 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSE-DTLDVFG 129 +L+VD ++TASHG IV+A + EFTVK+L LRP L+PMN + I + ++++++G Sbjct: 73 VLVVDRSLTASHGSIVVACIHNEFTVKRLLLRPRPCLMPMNKDFPVYYIDPDNESVEIWG 132 Query: 130 VVIH 133 VV H Sbjct: 133 VVTH 136 >UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM Length = 238 Score = 123 bits (309), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 90/132 (68%), Gaps = 2/132 (1%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 +PA+ + T PL V GFPSPA D+VE ++DLNQ L++HP+AT+FV+ +G+SMI+ Sbjct: 103 RPAE-QARFTIPLAGSRVAAGFPSPADDFVEAQLDLNQHLVKHPAATFFVRVAGESMIEA 161 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED 123 GI GD+L+VD ++ G IVIA +DGE TVK+L+ R + L+P N ++PI + +E Sbjct: 162 GIHPGDILVVDRSLQPESGQIVIAVLDGELTVKRLEKRAGKLFLMPANRNFTPIEVGAEA 221 Query: 124 TLDVFGVVIHVV 135 L ++GVV V Sbjct: 222 DLLIWGVVTSTV 233 >UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZEK7_SYNY3 Length = 144 Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 87/130 (66%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + PL++ V GFPSPA DY+E ++DLNQ LI+HP+AT+FV+ +GDSMI GI G Sbjct: 15 RTVYELPLYACPVSAGFPSPAEDYLEGKLDLNQYLIKHPAATFFVRVTGDSMIGAGIHAG 74 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 D+LIVD ++ G +VIA V+GE VK+L++ + + L NS Y P+ I+ +V+ Sbjct: 75 DILIVDRSLEPRDGKVVIAVVNGELLVKRLRMEKQKIYLASENSDYPPLVITDLMDFEVW 134 Query: 129 GVVIHVVKAM 138 GVV +V+ + Sbjct: 135 GVVTNVIHPL 144 >UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=Bacteria RepID=Q5ZW56_LEGPH Length = 168 Score = 122 bits (305), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 1/125 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+F+ +Q GFPSPA DY+E +DLN I+HPS+T+ ++A+G+SM++ GI GD L+V Sbjct: 43 LPVFASKIQAGFPSPADDYIEGYLDLNTKFIKHPSSTFVLQATGESMVEAGIFSGDWLLV 102 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D +I S G IVIAAV+GE TVK+L + VQL+P N + PI I+ + + ++GVV Sbjct: 103 DRSIEPSDGRIVIAAVNGELTVKRLSKKGGRVQLLPANPKFQPIDITEDSEMVIWGVVTL 162 Query: 134 VVKAM 138 V+ + Sbjct: 163 VLHEL 167 >UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE76_METSD Length = 148 Score = 121 bits (304), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 61/116 (52%), Positives = 80/116 (68%), Gaps = 3/116 (2%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL+ + V GFPSPAAD+VE R+ + L+ +P+ATYFV+ GDSMID GI DGD+L+VD Sbjct: 28 PLYDNPVAAGFPSPAADHVEDRLSADDYLVGNPTATYFVRVKGDSMIDAGIFDGDVLVVD 87 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +IT S G +V+A +DGEFTVK L QL+P N AY PI T+++ GVV Sbjct: 88 RSITPSIGHVVLAELDGEFTVKYLGRG---QLLPANPAYQPIKFKDGQTVEIVGVV 140 >UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE7_ECOK1 Length = 144 Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 55/116 (47%), Positives = 85/116 (73%), Gaps = 1/116 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P FSDL+ CG SP A + + ++L++ ++++ +T+FV+A+G SMI+ GI+DG +L+VD Sbjct: 17 PFFSDLLSCGVMSPCAGHEDNELNLHEYVVRNRPSTFFVRAAGLSMINAGINDGAILVVD 76 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 ++TA HG IV+A VDGEFTVK L P + L+P N AY PI ++ E +L+++GVV Sbjct: 77 RSLTARHGSIVVALVDGEFTVKILHTYPELLLMPSNPAYKPIRVNPE-SLEIWGVV 131 >UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SWQ8_POLSQ Length = 163 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L S + GFPSPAADY E +DLN L+Q+ AT+ GDSM+ GI DGD ++VD Sbjct: 32 LLSHRISAGFPSPAADYAEDGLDLNHYLVQNKPATFMFTVKGDSMLGAGICDGDKVVVDK 91 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ H DIV+A VD E+T+K+L QLR ++L P N + PIT + L ++GVV+ VV Sbjct: 92 ALKPKHKDIVVAVVDSEYTIKRLYQLRGRIELQPENPHFEPITFNEGSELQIWGVVVGVV 151 Query: 136 K 136 + Sbjct: 152 R 152 >UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=uncultured Bacteroidetes bacterium RepID=Q2YI98_9BACT Length = 145 Score = 119 bits (299), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 50/122 (40%), Positives = 79/122 (64%), Gaps = 4/122 (3%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 ++ GFPSPA DY+ +D N+ LI+HP AT++ + GDSM+D GI DGD+ ++D ++ Sbjct: 23 IKAGFPSPAEDYLHDSLDFNRDLIRHPEATFYGRVDGDSMVDAGICDGDIAVIDRSVEPQ 82 Query: 82 HGDIVIAAVDGEFTVKKLQLRPT----VQLIPMNSAYSPITISSEDTLDVFGVVIHVVKA 137 H D+++A V+GEFT+K L L ++L P N + PI I + D +V+GVV+ +K Sbjct: 83 HNDVIVAYVNGEFTIKYLDLSHKEEGFIELRPANQNFKPIRIDANDKFEVWGVVVWTIKN 142 Query: 138 MR 139 + Sbjct: 143 WK 144 >UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U468_9DELT Length = 156 Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 1/125 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + V GFPSPA DY+E+ +DLN+ L P AT+FV+ +GDSM I GD+L+V Sbjct: 32 LPLAGEAVPAGFPSPAEDYIEKTLDLNEYLAPRPEATFFVRVAGDSMTGASIHHGDILVV 91 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D ++T + G++VIA +DG FTVK+LQ ++L P N Y+P I+ + +++GVV H Sbjct: 92 DRSVTPNPGNVVIACIDGGFTVKRLQRTAGGLELAPENPDYAPTPITPDTDFEIWGVVRH 151 Query: 134 VVKAM 138 V+ + Sbjct: 152 VLHKL 156 >UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta proteobacterium KB13 RepID=B6BWB2_9PROT Length = 194 Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/126 (48%), Positives = 80/126 (63%), Gaps = 5/126 (3%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 LFS V GFPSPA D+ E R+DLN+ LI AT+FV+ GDSMID GI D D++IVD Sbjct: 71 LFSHKVPAGFPSPADDHAESRLDLNEYLISQTEATFFVRIKGDSMIDAGILDNDIVIVDR 130 Query: 77 AITASHGDIVIAAVDGEFTVK---KLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 + +AS DIV+A++DGEFTVK K RP L+P N + PI I +++GVV Sbjct: 131 SKSASINDIVLASIDGEFTVKVLAKNNKRP--YLMPANKEFKPIYIEEGSQFEIWGVVTG 188 Query: 134 VVKAMR 139 V+ + Sbjct: 189 SVRKFK 194 >UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV08_9SYNE Length = 142 Score = 117 bits (292), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S V GFPSPA D+++ I+LN+ LI HPSAT+ V+A G SM+ GI DLLIV Sbjct: 17 LPLYSCPVSAGFPSPATDHLDGHINLNEHLIPHPSATFLVRADGWSMVGEGIHHEDLLIV 76 Query: 75 DSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D + HG +V+AA+DGE TVKKL Q L+ N Y I + + + ++GVVIH Sbjct: 77 DRSEEPRHGRVVVAAIDGELTVKKLCQKEQQTFLMAANPDYPSIELGEDADVRIWGVVIH 136 Query: 134 VVKAMR 139 ++++MR Sbjct: 137 IIRSMR 142 >UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S24 n=8 Tax=Prochlorococcus marinus RepID=Q31B22_PROM9 Length = 138 Score = 115 bits (289), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 82/123 (66%), Gaps = 1/123 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL +D V GFPSPA DY E+ IDLN+ LI +P +T+F++ GDSMI+ GI D DL+IVD Sbjct: 14 PLLNDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVRGDSMINAGIKDKDLIIVD 73 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 ++TA G+I+IA +DGEFT+K+L ++ + L N Y + + ++GVVI+ Sbjct: 74 KSLTAKPGNIIIAMIDGEFTIKRLSIKNDELYLKAENHNYPDFRFKNHIDVQIWGVVIYS 133 Query: 135 VKA 137 + + Sbjct: 134 IHS 136 >UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S24 n=4 Tax=Bacteria RepID=Q30X28_DESDG Length = 208 Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 54/121 (44%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL V GFPSPA DY+++R+DLN+ L+++P +T++V+ G+SM D GI GD+L+VD Sbjct: 85 PLMLSCVAAGFPSPADDYIDRRLDLNEYLVRNPESTFYVRVHGESMRDAGIWAGDILVVD 144 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A+ + G +VIA +DGE TVK+L+ + L+P N YSP+ +S + V+GVV V Sbjct: 145 RAVQPATGRVVIAVLDGELTVKRLKKEGDRLLLVPENPDYSPVDVSGREDFSVWGVVTCV 204 Query: 135 V 135 + Sbjct: 205 L 205 >UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F9F Length = 191 Score = 114 bits (285), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 65/141 (46%), Positives = 88/141 (62%), Gaps = 6/141 (4%) Query: 2 LFIKPADLREIVTFPL--FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 +F P+ E+ + PL FS V GFPSPA D+VE+R+DLN LI AT+FV GD Sbjct: 54 IFTAPS---ELGSQPLAWFSHKVPAGFPSPADDHVEKRLDLNDYLIAQKEATFFVSIKGD 110 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPIT 118 SMID I DGD++IVD + A GDIV+A++DGEFTVK L + +L+P NS Y I Sbjct: 111 SMIDASIHDGDIVIVDRSKDAKIGDIVLASIDGEFTVKTLAKHLSHPRLLPANSEYKYID 170 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I+ +++GVV V+ + Sbjct: 171 ITEGMVFEIWGVVTGAVRKFK 191 >UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S24 n=14 Tax=Bacteroidetes RepID=Q11V04_CYTH3 Length = 142 Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 49/124 (39%), Positives = 83/124 (66%), Gaps = 3/124 (2%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P SD + CGFPSPA DY++ IDLN+ LI +P+AT+ + G+SMID GI +GD+LI+D Sbjct: 16 PFISDKLVCGFPSPATDYLDLSIDLNRELITNPNATFCGRVKGNSMIDAGIEEGDVLIID 75 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQL---RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 + + I + +DGEFTVK++++ + + L+P N + PI ++ ++ ++G+V+ Sbjct: 76 RSKELTDNSIAVCFLDGEFTVKRVKVYKSKKEIHLMPSNKNFKPIIVTPDNEFTIWGIVV 135 Query: 133 HVVK 136 + +K Sbjct: 136 YTIK 139 >UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Betaproteobacteria RepID=Q0ACZ4_NITEC Length = 147 Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 61/132 (46%), Positives = 81/132 (61%), Gaps = 2/132 (1%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P + E V PL+S V+ GFPSPA D++ +RIDL+ LI+HP AT+ ++ G SM G Sbjct: 15 PVQVGEPVYIPLYSG-VRAGFPSPADDFLLKRIDLSNELIKHPEATFLMRIKGHSMTMAG 73 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDT 124 I DGD+++VD A+ HG IVIA VDGEFT K+L L +L P N Y I Sbjct: 74 IDDGDIVVVDKAVKPEHGKIVIACVDGEFTCKRLYLLDGETRLQPANPDYKDIIFKDGQI 133 Query: 125 LDVFGVVIHVVK 136 L+V+GVV +K Sbjct: 134 LEVWGVVTSCIK 145 >UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTX3_METML Length = 205 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 63/133 (47%), Positives = 82/133 (61%), Gaps = 4/133 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F PA E + PLFS V G PSPA D++EQR+D N+ LI T+FV G SM+ Sbjct: 65 FELPALETESMELPLFSSKVSAGLPSPAEDHLEQRLDPNEFLIDKKDTTFFVTIQGYSMV 124 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSA--YSPIT 118 D G+ GD +VD A AS GDIV+A +DGEFT+K L V+L+P NS+ Y+PI Sbjct: 125 DVGLLPGDKAVVDRAKIASIGDIVLAVIDGEFTIKTLSRSKEGNVRLLPANSSADYAPIN 184 Query: 119 ISSEDTLDVFGVV 131 I+ E +V+GVV Sbjct: 185 ITEEMNFEVWGVV 197 >UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXC0_9BACT Length = 152 Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 4/122 (3%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 ++ GFPSPA DY++ RID N+ LI+HP AT++ + SGDSM+ GI DGD+ ++D A Sbjct: 23 IKAGFPSPAEDYLQDRIDFNRDLIKHPEATFYGRVSGDSMVGVGIYDGDIAVIDRAEEPK 82 Query: 82 HGDIVIAAVDGEFTVKKLQL----RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKA 137 DIV+A V+GEFT+K L ++L+P N + PI + ++D +++GVV V+K Sbjct: 83 DKDIVVAYVNGEFTLKFLNTAHAQEGYIELMPANENFKPIKVVNDDDFEIWGVVTFVIKN 142 Query: 138 MR 139 + Sbjct: 143 CK 144 >UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=Prevotella RepID=C9PZS8_9BACT Length = 146 Score = 113 bits (282), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 52/137 (37%), Positives = 84/137 (61%), Gaps = 5/137 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + E + P+ L + GFPSPA DY+ + +D N+ LI++P AT++ + GDSMI+ GI Sbjct: 9 GNFNEKLKLPIAEGL-KAGFPSPAEDYLHETLDFNRDLIRNPEATFYGRVEGDSMIEAGI 67 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL----RPTVQLIPMNSAYSPITISSE 122 DGD+ ++D ++ GD+V+ ++ EFT+K L L ++L P N + PI I + Sbjct: 68 CDGDIAVIDRSLEPRDGDVVVGYINEEFTIKYLDLCHREEGYIELRPANPNFCPIRIDED 127 Query: 123 DTLDVFGVVIHVVKAMR 139 D+ +V+GVVI +K R Sbjct: 128 DSFEVWGVVIWTIKNWR 144 >UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cellular organisms RepID=C5T315_ACIDE Length = 148 Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 1/125 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PL V+ GFPSPA D+V +R+D+ QLL++HP ATYF + GDSM D GI DG ++ Sbjct: 20 LVLPLCGVSVRAGFPSPADDFVVERLDIMQLLVKHPQATYFWRVRGDSMRDAGIEDGSII 79 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 VD AI H IV+A VDGE TVK L R ++L N Y I T++V+GVV Sbjct: 80 AVDRAIKPKHNSIVVAIVDGECTVKYLHQRAGRIKLRAANPTYPDIIPRDSQTIEVWGVV 139 Query: 132 IHVVK 136 VK Sbjct: 140 SGCVK 144 >UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX74_DESAD Length = 144 Score = 111 bits (277), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 51/124 (41%), Positives = 84/124 (67%), Gaps = 1/124 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PL V GFPSPA DY+++++DLN+ LI + +AT+ ++A GDSMID I +GD+L Sbjct: 17 IELPLLLSEVIAGFPSPADDYIDKKMDLNEHLISNKAATFLIRAYGDSMIDANIKEGDIL 76 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++ A + I+IA +GE TVK+++ R + L+P N Y + I+ E + +V+GVV Sbjct: 77 VVDRSMDAHNNSIIIAIFNGELTVKRIKQRAGRLFLLPENPEYPLLEITEETSFEVWGVV 136 Query: 132 IHVV 135 +++ Sbjct: 137 TYII 140 >UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=4 Tax=Bacteria RepID=A8GUC2_RICB8 Length = 139 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 82/131 (62%), Gaps = 3/131 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + PLF VQ G+PSPA Y+ +DLN LI+HP +T+FV+ +GDSMID GI Sbjct: 9 CSVEKACELPLFDTKVQAGYPSPADGYMSNSLDLNSHLIKHPKSTFFVQVTGDSMIDAGI 68 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTL 125 + DLLIVD ++ ++ IVIA ++ EFTVK+L+ + L+P N + P I E+ Sbjct: 69 RENDLLIVDKSLPPTNNKIVIAVINNEFTVKRLKFINDEAYLMPENKDFPPTKI--ENGT 126 Query: 126 DVFGVVIHVVK 136 ++GVV V++ Sbjct: 127 YIWGVVTSVIQ 137 >UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1_SYNS3 Length = 147 Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE + PL D + GFPSPA DY++ IDLN+ LI+HPS+T+F++ SGDSM GI G Sbjct: 18 RESLCLPLAHDQIAAGFPSPADDYIDVGIDLNEQLIRHPSSTFFLRVSGDSMTGEGIHHG 77 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 DLL+VD ++ G +V+A +DG FT+K+L + R ++L N Y + + + ++ Sbjct: 78 DLLVVDRSLDPHPGRVVVAILDGAFTLKRLVRHRGHLRLEAANPDYPHLDLHHCGDVQIW 137 Query: 129 GVVIHVVKAM 138 GV IHV+ + Sbjct: 138 GVAIHVIHPL 147 >UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV3_METSD Length = 153 Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/126 (45%), Positives = 82/126 (65%), Gaps = 4/126 (3%) Query: 16 PLFSDLVQCG---FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P++S V+ G FPSPA DY + +DLN+ L+++P AT+F SGDSMI GI +G L Sbjct: 26 PIYSGKVRAGQSRFPSPAQDYEQAELDLNKRLVRNPPATFFFTVSGDSMIGAGIFEGSTL 85 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD +I A IV+A V+GE VK+L R V+L+ N AY+PIT++ L ++GVV Sbjct: 86 VVDRSIKAKSTSIVVAMVEGELMVKRLYKRGAVVKLLSDNPAYAPITLTEGQELIIWGVV 145 Query: 132 IHVVKA 137 +V+ A Sbjct: 146 TYVINA 151 >UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ28_9PROT Length = 206 Score = 109 bits (273), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 60/133 (45%), Positives = 82/133 (61%), Gaps = 4/133 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F P + PLF+ V GFPSPA D+VE+R+D+++ LI H ++T+FV G+SMI Sbjct: 66 FFTPVISEQPTLLPLFATKVAAGFPSPADDHVEKRLDVSEFLIDHAASTFFVTIRGESMI 125 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNS--AYSPIT 118 D G+ D ++VD T SHGDIV+A VD EFT+K L +L+P NS AY PI Sbjct: 126 DVGLLPDDKVVVDRCKTPSHGDIVLAVVDREFTIKILDYGANKMPRLMPANSTGAYRPIY 185 Query: 119 ISSEDTLDVFGVV 131 I + ++FGVV Sbjct: 186 IRPDTQFEIFGVV 198 >UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T1_SALRD Length = 140 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 77/120 (64%), Gaps = 1/120 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M +PA + P F V+ GFPSPA+DYVE +DL + LI+H +ATY+++ SG S Sbjct: 1 MTAARPARHTPRLRQPFFLTRVEAGFPSPASDYVETELDLAEHLIEHEAATYYLRVSGTS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITI 119 M GI DGD+L+VD A+ + GD+V+AA+D E TVK+L+ R L+P + + PI + Sbjct: 61 MTRAGIHDGDILVVDRAVEPADGDVVVAALDAELTVKRLRTRDGRAFLVPESQHHDPIPV 120 >UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria RepID=Q6F8Y7_ACIAD Length = 203 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 5/134 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 +I PL ++ V G PSPA ++VEQ +DLN+ L+++ +AT+ VKA+ SM+D GI D Sbjct: 70 KIYQIPLATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAGIDIDD 129 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-----PTVQLIPMNSAYSPITISSEDTL 125 LIVD +ITA GDIVIA VD EFTVK+L + P V L N + I I L Sbjct: 130 PLIVDRSITAKAGDIVIAMVDNEFTVKRLMIDHHFHPPKVWLKAENPDFQNIYIDEGQEL 189 Query: 126 DVFGVVIHVVKAMR 139 ++GVV + +K MR Sbjct: 190 VIWGVVTYNLKPMR 203 >UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=Alphaproteobacteria RepID=A8U3Z8_9PROT Length = 147 Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 59/121 (48%), Positives = 84/121 (69%), Gaps = 2/121 (1%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L++ V GFPSPA D+++ ++DL+ LI+ P+AT+FV+A G+SM D G+ DGDLLIVD Sbjct: 23 LYASRVSAGFPSPADDHLDGKLDLSLHLIRRPAATFFVRAQGESMRDAGLFDGDLLIVDR 82 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 AIT DIVIAAV+GE TVK+L +L+ T L N +S I + + +V+GVV H + Sbjct: 83 AITPQVSDIVIAAVNGELTVKRLKKLQGTWALSAENPEFSDIHL-GDAGCEVWGVVTHSI 141 Query: 136 K 136 + Sbjct: 142 R 142 >UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ2_9BACT Length = 127 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 55/128 (42%), Positives = 83/128 (64%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL V GFPSPA D+VE +++++ LI+HP A++F++ G+SM GI GD+L+ Sbjct: 3 TCPLLLHSVNAGFPSPADDFVEMQLNIHDHLIKHPCASFFLRVGGESMKGAGIYPGDILV 62 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGVV 131 VD ++ A DIVIA ++GEFTVK+L+ +LI N AY+PI D ++++GVV Sbjct: 63 VDRSLQAQKSDIVIAIIEGEFTVKQLKFNQHGKPRLIAANRAYAPIEC---DNIEIWGVV 119 Query: 132 IHVVKAMR 139 VV+ + Sbjct: 120 TGVVRKYK 127 >UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W5K4_MAGSA Length = 156 Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/127 (41%), Positives = 81/127 (63%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 T P++S LV GFPSPA D++E ++DL++L+++ P+AT+F +A GDSM GI GDLL Sbjct: 27 ATAPIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGIHSGDLL 86 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++ GDIV+A +DG TVK L + +L N Y ++ +D + ++GVV Sbjct: 87 VVDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVV 146 Query: 132 IHVVKAM 138 V A+ Sbjct: 147 TFSVSAL 153 >UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2_9GAMM Length = 160 Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 55/133 (41%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D + P+ +Q GFPSPA D++E R+DLN LLI P+AT++++ GDSM D G+ Sbjct: 23 DFGSRMPLPVAGYSIQGGFPSPAEDFLESRLDLNDLLIARPAATFYLRYQGDSMRDAGLH 82 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLD 126 GD+L+VD A + HGDIV+A VDGE T K+L R ++L + + I + + L Sbjct: 83 PGDILVVDRAESPRHGDIVVAVVDGEMTCKRLYNRAGLIRLDAEHPEFPNIELRQDSELV 142 Query: 127 VFGVVIHVVKAMR 139 ++GVV VK + Sbjct: 143 IWGVVTAAVKRFK 155 >UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD (HTH, RecA-mediated autopeptidase) n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C3_METI4 Length = 188 Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 56/129 (43%), Positives = 85/129 (65%), Gaps = 4/129 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E +++PLF V GFP+PA D++E+ + L++LLI+ P+AT+FVKASG+SM GI DGD Sbjct: 55 EALSYPLFGCRVAAGFPNPADDHLEKSLSLDELLIKRPAATFFVKASGNSMEGEGIRDGD 114 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP---TVQLIPMNSAYS-PITISSEDTLD 126 +L+VD A +G IV+AA++GE VKKL + ++ +P A + + I E L Sbjct: 115 ILVVDRAEKPKNGSIVVAAINGELVVKKLWMEAGHSWLKSVPAEGAKAFSMEIHEEVELV 174 Query: 127 VFGVVIHVV 135 ++GVV V+ Sbjct: 175 IWGVVTAVI 183 >UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB83_KANKD Length = 140 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 79/124 (63%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL+S + GFP +++E + L+QLLIQ+P+ T+F K GDSMI GI D+L+VD Sbjct: 17 PLYSGKISAGFPGVVDEHMEDTLSLDQLLIQNPATTFFAKVEGDSMIGAGIFQNDILVVD 76 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++TA D+V+A +D EFTVK+L ++L N AY I I+ E L ++GVV + Sbjct: 77 RSLTAKDKDVVVAMLDNEFTVKRLCTSGALRLQAENPAYQDILITGESELVIWGVVTGLA 136 Query: 136 KAMR 139 +++R Sbjct: 137 RSLR 140 >UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQT5_9SYNE Length = 156 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/130 (45%), Positives = 85/130 (65%), Gaps = 6/130 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL+S + GFPSPA DY+E+ +DLN LI++P+AT+F +A GDSM GGI DGDLL Sbjct: 26 VELPLYSCRLSAGFPSPADDYIEKTLDLNAHLIENPAATFFARACGDSMEPGGIFDGDLL 85 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQ--LRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 I+D +I +G +V+ A++GE VK+L L TV L N Y PI ++ + +GV Sbjct: 86 IIDRSIEPRNGRVVVVALNGEMLVKRLHTTLDRTV-LSADNRNYPPIEVTEFCSFHFWGV 144 Query: 131 V---IHVVKA 137 V IH++++ Sbjct: 145 VKASIHMMES 154 >UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLR5_YERE8 Length = 137 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Query: 26 FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDI 85 F + A DY+E+RID+N+ I HP+AT+F+ A G+S+I GI G LL++D ++ A HGDI Sbjct: 23 FGNAAQDYIEKRIDINEHCIVHPAATFFMTAEGESLIAAGIHHGALLVIDRSLPAKHGDI 82 Query: 86 VIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDT-LDVFGVVIHVVKAMR 139 V+A + GEF++K+L LRPT +L +N+ + + D L +FGV+ + +R Sbjct: 83 VVATIGGEFSIKRLYLRPTPRLEALNAGTPALILCEGDEDLVIFGVITFCINKLR 137 >UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE3_9ACTO Length = 146 Score = 108 bits (269), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 59/125 (47%), Positives = 81/125 (64%), Gaps = 4/125 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL DL G+PSP+ DY ++ IDLN+ LI++ AT+ V+ +GDSMI+ GISDGD LIV Sbjct: 25 LPLAPDLAPAGWPSPSQDYFDRDIDLNEHLIRNRPATFLVRVAGDSMINAGISDGDELIV 84 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D ++ AS G++VIA +DGE TVK+L +L P N Y PI SE L ++GVV Sbjct: 85 DRSLEASEGNVVIAIIDGEMTVKRLHFGTHGPELHPANPTY-PILHPSE--LQIWGVVTR 141 Query: 134 VVKAM 138 + + Sbjct: 142 CLHRL 146 >UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5S9_9PROT Length = 159 Score = 107 bits (268), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 57/118 (48%), Positives = 79/118 (66%), Gaps = 5/118 (4%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVE+R+ L++ LIQH +T+F++ +G SM D GI DGDLL+VD Sbjct: 37 LLRKAVPAGFPSPADDYVERRLSLDEHLIQHRESTFFMRVAGHSMRDLGIFDGDLLVVDR 96 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSA---YSPITISSEDTLDVFGVV 131 ++ A+HG +V+A +DGEFTVK QL T Q + +A Y I I++E ++GVV Sbjct: 97 SVPATHGCVVVAVIDGEFTVK--QLLYTAQGKVLRAAHPDYPDIAITAEHDFSIWGVV 152 >UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group RepID=Q7NVL0_CHRVO Length = 198 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 2/130 (1%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A L E+ + PLF+ V G P PA D E IDLN L+ P T+ VK GDSM GI Sbjct: 66 AQLSEL-SLPLFAGSVPAGSPVPADDLKETDIDLNTHLVSRPGDTFMVKVKGDSMQGAGI 124 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 DGDLL+V+ + G +V+AA++GE TVK+L+ P V+L+P N AY PI + + + Sbjct: 125 HDGDLLLVERSREPRSGKVVVAALNGELTVKRLERGPAGVRLLPENPAYQPIDVPEDSSF 184 Query: 126 DVFGVVIHVV 135 ++GVV V+ Sbjct: 185 HIWGVVTSVI 194 >UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1D7X6_LARHH Length = 206 Score = 107 bits (267), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/132 (45%), Positives = 81/132 (61%), Gaps = 1/132 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PA L ++ PL + V+ G PSPA DYVE +DLN LI +T+ V+A G+SM Sbjct: 73 PARLAPVLGMPLHAAGVRAGMPSPADDYVEDTLDLNHYLIDDAPSTFLVRAKGESMTGAH 132 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 + DGD+L+VD + T S GDIV+AA++GEFTVK+LQ + V L N Y I S E Sbjct: 133 VFDGDILVVDKSRTPSSGDIVVAAIEGEFTVKRLQRQGGRVILKAANPDYPDIVPSYEQE 192 Query: 125 LDVFGVVIHVVK 136 L ++GVV V+ Sbjct: 193 LVIWGVVTGCVR 204 >UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXG1_PSEA7 Length = 147 Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/130 (41%), Positives = 79/130 (60%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + PLF V GFPSPA D++E + L++L + HP+AT+F++ GDSM GI DG Sbjct: 15 RPGLRLPLFLSRVAAGFPSPAEDHIEASLSLDELCVVHPAATFFLRVVGDSMTGLGIFDG 74 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI-PMNSAYSPITISSEDTLDVF 128 D+L+VD +IT G +V+A V+GEFT K+L ++ N AY I + + L+VF Sbjct: 75 DILVVDRSITPRAGMVVVAVVNGEFTCKQLAYEHGAPVLRAANKAYPDIRLRDGEDLEVF 134 Query: 129 GVVIHVVKAM 138 GVV + + Sbjct: 135 GVVTRCIHKL 144 >UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7JBK7_ACIF2 Length = 164 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 56/123 (45%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P + GFPSPA YVEQ+IDLN LIQH AT+ ++ SG SM D GI DGD ++ Sbjct: 39 TLPFMVSRIAAGFPSPADGYVEQQIDLNTHLIQHREATFILRVSGWSMRDVGIFDGDEIL 98 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD AIT G IV+AA++G+ TVK+L ++ V L+ N + I + + L ++GVV Sbjct: 99 VDRAITPVDGKIVVAAINGDLTVKRLRRIGSAVHLVAENPEFPTIILKEGEELCIWGVVT 158 Query: 133 HVV 135 V+ Sbjct: 159 RVL 161 >UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n=3 Tax=Proteobacteria RepID=C8X193_DESRD Length = 148 Score = 105 bits (261), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 1/124 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL++ V GFPSPA D++++ +DL++ LI + +AT+ V+ SGDSM GI DGD+L+VD Sbjct: 25 PLYTARVPAGFPSPADDHLDRPLDLHEYLISNEAATFMVRVSGDSMSGAGILDGDILVVD 84 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 +++ G IV+A +DGE TVK+L R +L + Y P+T+ E V+GVV V Sbjct: 85 RSLSPRTGHIVVAVLDGELTVKRLTRRGEQWRLEAAHDGYPPLTVRPEQEFLVWGVVAGV 144 Query: 135 VKAM 138 V+ + Sbjct: 145 VRRL 148 >UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IHW7_9CHRO Length = 182 Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 55/140 (39%), Positives = 84/140 (60%), Gaps = 3/140 (2%) Query: 1 MLFIKPADLREIVT-FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 + ++ P D T PL ++ V GFPSPA DYVE IDLN LI P++T+ ++ GD Sbjct: 13 LTWLGPIDTAAAGTGLPLATETVAAGFPSPADDYVEASIDLNAALIPRPTSTFLMRVEGD 72 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPIT 118 +M GI GDLL++D ++ A G V+ DG F +++L+ RP QL+ + A +P+ Sbjct: 73 AMRAAGIHHGDLLVIDRSVNARPGCTVVVVHDGRFLLRQLRGQRPPWQLVASDPAIAPMV 132 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + +D L ++GVVIH V + Sbjct: 133 LQDDDAL-IWGVVIHAVHHL 151 >UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN99_9DELT Length = 144 Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 49/127 (38%), Positives = 80/127 (62%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V P S LV GFPSPA DY+++ +DLN+ LI + +A++F++ +G+SM GI GD+L Sbjct: 17 VLLPEVSALVPAGFPSPADDYLDRTLDLNEYLIHNQAASFFIRVAGESMQGAGILPGDIL 76 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++ +H IV+A +D E VK+L+ R L+P + + PI I+ ++GVV Sbjct: 77 LVDRSVEPAHNKIVVAVLDDEMVVKRLRYRQGRGVLVPEHPGFRPIEITDAMEAHIWGVV 136 Query: 132 IHVVKAM 138 V++ + Sbjct: 137 TAVIRKL 143 >UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular organisms RepID=A3M2E1_ACIBT Length = 167 Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/129 (39%), Positives = 80/129 (62%), Gaps = 1/129 (0%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 I P S+ + GFPSPA DYV++ +D+N+ LI++ +AT+ VK SMI+ GI D Sbjct: 36 IKEIPFVSERISAGFPSPAQDYVDKLMDMNEHLIRNEAATFIVKVCSLSMINAGIDINDE 95 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 L+VD ++ A + DIV+A ++ EFTVK+L++ + + L N Y I + L V+GV Sbjct: 96 LVVDRSLEAKNNDIVVALIENEFTVKRLKIEGSKIWLKAENPDYQDIYFNEGQKLIVWGV 155 Query: 131 VIHVVKAMR 139 V ++K +R Sbjct: 156 VTFILKNVR 164 >UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S24 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT3_CHRSD Length = 146 Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 54/114 (47%), Positives = 77/114 (67%), Gaps = 6/114 (5%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPA DYV + +DLN+ L++ P+AT+F+ +GDSM+D GI DGD L+VD +I A G Sbjct: 31 GFPSPAEDYVGRTLDLNERLVKRPAATFFMTVAGDSMVDFGIQDGDTLVVDRSIDAKPGH 90 Query: 85 IVIAAVDGEFTVKKLQL---RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 IV+A VDGE VK+ ++ RP L N Y+PI +++ + V+GVV V+ Sbjct: 91 IVVALVDGEVIVKRYEIIGRRP--YLCSGNFQYAPIPLANIEC-QVWGVVRSVI 141 >UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=Q5NWB9_AZOSE Length = 158 Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P+ R + PL V GFPSPA DY ++++D+N L+++P +T++ GDSM Sbjct: 23 PSPTRGCLAIPLGLAPVSAGFPSPAEDYEDKKLDINDYLVRNPVSTFYFPVKGDSMQGAQ 82 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 + DGD+L+VD ++ +HG +VIA V+GE VK+ R + L+ N Y P+ ++ Sbjct: 83 VFDGDILVVDRSVMPAHGHVVIAFVNGERLVKRFHRRGDRIALLAENPGYPPLELTEGSE 142 Query: 125 LDVFGVVI 132 L ++GVVI Sbjct: 143 LVIWGVVI 150 >UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK22_9BURK Length = 142 Score = 97.8 bits (242), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 50/115 (43%), Positives = 72/115 (62%), Gaps = 1/115 (0%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPA D RID+ ++L+++P++T+++ G SM + GI DGD LIVD ++TA H Sbjct: 27 GFPSPAQDLAVNRIDIGEILVKNPTSTFYLCVKGHSMKEAGIEDGDHLIVDRSLTAKHNS 86 Query: 85 IVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 IVIA +DG+ TVK+L + V +L N Y I ++GVV HV+K M Sbjct: 87 IVIAEIDGDVTVKRLHKKNGVIRLKAANLTYPDIVPVPGQEWMIWGVVTHVIKDM 141 >UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B4V8_METEA Length = 144 Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL + V+ GFPSPA D++EQ IDL +LL+ + +T+ V+ SGDSM+ + DGD+ Sbjct: 12 VPLPLLAGAVRAGFPSPAEDFIEQEIDLQRLLVPNRPSTFLVRVSGDSMVLARLFDGDIA 71 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++T S GDIV+ +DGE + K R VQL N + I ++ ++++G+V Sbjct: 72 VVDRSLTPSDGDIVVVDIDGERSFKIWSRRAGRVQLSFANPRFPEFEIQADAVVEIWGIV 131 Query: 132 IHVVKAMR 139 + R Sbjct: 132 SGSINPRR 139 >UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Pseudomonas RepID=B1J8T0_PSEPW Length = 152 Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S V GFPSPAAD++E I L+++ Y VK GDSM GI GD++IV Sbjct: 26 LPLYSFHVPAGFPSPAADHLEGHISLDEIFDLRAPHVYLVKVEGDSMQGAGIYSGDIVIV 85 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPM-NSAYSPITISSEDTLDVFGVVIH 133 D A HGDIVIAAV+ E K+L R V ++ N AY P I D L ++GVV + Sbjct: 86 DRGREAEHGDIVIAAVNCEPVCKRLHRRDAVVILKSENPAYPPRYIMEGDELVIWGVVRY 145 Query: 134 VVK 136 V+ Sbjct: 146 SVR 148 >UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5B2_9PROT Length = 153 Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/116 (46%), Positives = 71/116 (61%), Gaps = 1/116 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVEQRI L++ LI +T+F++ +G+SM GI DGDLL+VD Sbjct: 31 LLRRAVPAGFPSPADDYVEQRISLDEHLIGRRESTFFMRVAGESMRGLGIFDGDLLVVDR 90 Query: 77 AITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 A+ A+ G +VIA VDGEFTVK+ L L + Y + I E ++GVV Sbjct: 91 ALPATSGCVVIAVVDGEFTVKQLLHTSDGPVLRAAHPDYDDMRIQPEQDFSIWGVV 146 >UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5S2_THIIN Length = 165 Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 3/130 (2%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 + P+ + V GFPSPA D+ + +DLNQLL+++P AT+ +A+G SMI GI DGD+ Sbjct: 27 VFRLPMGAARVAMGFPSPAEDFEDDSVDLNQLLVRNPPATFLYRATGWSMIQAGICDGDV 86 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQ--LRPTVQLIPMNSAYSPITISSEDTLDVFG 129 LI+D ++ GD+VIA DG V K+ ++L N +PI +S + +++F Sbjct: 87 LIMDRSVRPQDGDVVIAVWDGNAPVCKVLHVFDDRIELHSRNPRIAPIVLSPDTEVEIFA 146 Query: 130 VVIHVVKAMR 139 VV V + MR Sbjct: 147 VV-GVARQMR 155 >UniRef50_B4TAQ3 DNA polymerase V subunit n=11 Tax=root RepID=B4TAQ3_SALHS Length = 223 Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 72/119 (60%), Gaps = 5/119 (4%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPA+DYVE RI L+Q LI P+ATYF++AS S GI G LL+VD++++A G Sbjct: 96 GFPSPASDYVETRISLDQQLISQPAATYFMRAS-RSHFREGIIQGALLVVDASLSACDGS 154 Query: 85 IVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD----VFGVVIHVVKAMR 139 ++I A+DGEF +K+ + P LI + + D + +FGV+ +++ R Sbjct: 155 LLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYIINDAR 213 >UniRef50_A9L6E3 Peptidase S24 and S26 domain protein n=39 Tax=Gammaproteobacteria RepID=A9L6E3_SHEB9 Length = 144 Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/113 (43%), Positives = 73/113 (64%), Gaps = 1/113 (0%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPAADY+E + L+QLL++HPS+T+F + +G SM GI DGD+LI+D A + Sbjct: 14 GFPSPAADYLELPLSLDQLLVEHPSSTWFGRTAGRSMEGVGIYDGDILIIDRAAPRRNMS 73 Query: 85 IVIAAVDGEFTVKKLQLRPTVQL-IPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +V+A+ +GEFTVK L ++ + + I + + I DT V GVVI ++ Sbjct: 74 LVVASYNGEFTVKLLDMKRRLLVSIDQQQNMTYVAIDEADTFSVDGVVIKSIR 126 >UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTL1_CHLT3 Length = 270 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+F V G ++ +E+ I L +L++HP +Y V+ASG+SM+ GI GDL Sbjct: 142 MVEIPVFMHRVSAGPAVASSSEIEEYIKLPTVLLKHPKRSYAVRASGNSMVGAGIHSGDL 201 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGV 130 LIVD H IVIA+++GE TVK+L + + L P NS Y I+ E + GV Sbjct: 202 LIVDQEAAIKHKCIVIASINGEQTVKRLLIEDGELVLAPENSHYQSTPITKEMNFSILGV 261 Query: 131 VIHVVK 136 V+H+++ Sbjct: 262 VMHIIR 267 >UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria RepID=C6M792_NEISI Length = 204 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 4/134 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + P + + GFPSPA Y+ +D N+ LI PSAT+ ++ G SM+D GIS Sbjct: 68 RTTLKVPYALEKIPAGFPSPAEPYIADYLDFNEYLIATPSATFAARSGGYSMLDAGISKD 127 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQ----LRPTVQLIPMNSAYSPITISSEDTL 125 D++I+D + T HGDIV+A + EFT+K+L +P + + Y DT Sbjct: 128 DIMIIDRSKTPKHGDIVMADLGNEFTIKRLYKVPGRKPELHSENASGEYPDFVPDESDTW 187 Query: 126 DVFGVVIHVVKAMR 139 + GVV V+K +R Sbjct: 188 TIIGVVTFVIKDVR 201 >UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=C0VG55_9GAMM Length = 161 Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 1/119 (0%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V GFPSPA DY++++ID+N+ LI + AT+ VK SM + GI D LIVD ++ A Sbjct: 42 VSAGFPSPAQDYIDKKIDMNEHLISNECATFIVKVGSLSMKNAGIDIDDELIVDRSLDAK 101 Query: 82 HGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 H DIV+A +D +FTVK+L++ + L N Y I + L ++GVV ++K R Sbjct: 102 HDDIVVALIDNDFTVKRLKIEQHRTWLKAENPDYDDIHLKDGQQLIIWGVVTFILKKAR 160 >UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2ILA1_BEII9 Length = 149 Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 49/128 (38%), Positives = 78/128 (60%), Gaps = 5/128 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P F + + GFPSPA DY+++ IDLN LLI++ AT+ + G SM + GI GDLL+V Sbjct: 20 LPYFLEGLCAGFPSPADDYLDESIDLNDLLIRNQPATFLWRVDGHSMREAGIFHGDLLVV 79 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSP--ITISSEDTLDVFGVV- 131 D ++ + GDIV+ V+GE ++K+LQ+R + + P + + D ++++GVV Sbjct: 80 DRSLAPADGDIVVVIVNGERSLKRLQIRKGQLTLSFENKDYPEGLALHEGDEIEIWGVVR 139 Query: 132 --IHVVKA 137 IH +A Sbjct: 140 CSIHWHRA 147 >UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Arthrobacter RepID=A0K1P5_ARTS2 Length = 143 Score = 92.8 bits (229), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 51/110 (46%), Positives = 71/110 (64%), Gaps = 1/110 (0%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G+PSPA DY + RIDLN+ LI+ ++TY V+ SGDSM GISDGD LIV+ A+ Sbjct: 26 VAAGYPSPAQDYFDGRIDLNEHLIKDITSTYIVRVSGDSMEGAGISDGDELIVNRALDPK 85 Query: 82 HGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 G +VIA +DGE T+K+L++ + V L N Y I + + L ++GV Sbjct: 86 DGSVVIAVLDGELTIKRLRVTASGVVLQADNPRYPDIRVPALSDLVIWGV 135 >UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM9_METSD Length = 161 Score = 92.4 bits (228), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 3/124 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ P FS V GF +PA D++E+ ID N LI P+AT ++ GDSMI+ I + D+L Sbjct: 39 LSLPYFSSTVHAGFENPANDHIEEEIDPNGYLIDDPNATILIRVKGDSMIEAEIFEDDIL 98 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 IV+ A GDIV+A +DG FTVK L LIP N Y I L + GVV Sbjct: 99 IVNRKRRARAGDIVVAELDGGFTVKYLGKHC---LIPANKKYPVIKFQDMQELRLIGVVT 155 Query: 133 HVVK 136 +K Sbjct: 156 GKMK 159 >UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_9BACT Length = 216 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 54/140 (38%), Positives = 77/140 (55%), Gaps = 4/140 (2%) Query: 4 IKPADLREIVTFPLFSD-LVQCGFP-SPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 I PA +T P F + V GFP + D Q +D+ ++L +P A+Y +K GDSM Sbjct: 76 IYPATSVRSMTLPKFDNARVVAGFPLALDTDEQAQSVDILRMLCPNPEASYLIKVRGDSM 135 Query: 62 IDGGISDGDLLIVD-SAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITI 119 ID GISDGD++IVD S T S ++ + +GE+T+K + Q L+P N Y I I Sbjct: 136 IDAGISDGDIIIVDKSNRTPSEHEVAVCEYNGEYTIKHIVQQAGKTWLVPANPKYPRIEI 195 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 ED V+GVV + + R Sbjct: 196 FEEDDFSVWGVVTYTIHKPR 215 >UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor n=6 Tax=Bacteria RepID=Q4PJ96_9BACT Length = 131 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 +T P + GFPSPA DY+E+ IDLN LI++ AT+ ++ G SM++ GI DGDLL Sbjct: 3 LTIPYYLHKAGAGFPSPATDYIEEDIDLNVHLIKNVPATFIIRVQGKSMVNAGIYDGDLL 62 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAY--SPITISSEDTLDVFGV 130 +VD ++ + VIA V E VK Q + S I I+ E + V+GV Sbjct: 63 VVDKSLKPKNFSTVIANVHDELVVKNFVKEKDRQFLTSGSKKFEDRILINEEADVFVWGV 122 Query: 131 VIHVVKAM 138 V +V+ ++ Sbjct: 123 VTYVIHSV 130 >UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L2_9GAMM Length = 160 Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 46/107 (42%), Positives = 70/107 (65%), Gaps = 2/107 (1%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + + GFPSPA D+++ IDL++LL+++P+AT+ +A G SM G+SDGD+L+VD Sbjct: 27 PLAAARARLGFPSPADDFMDDAIDLHRLLVRNPAATFLYRADGWSMSGAGVSDGDILVVD 86 Query: 76 SAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITIS 120 ++T GD+VIA DG + T K LQL ++L N + PI + Sbjct: 87 RSVTPQGGDLVIAIWDGNQPTCKVLQLFESHMELHSANPDFPPIVLE 133 >UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1S3_9PROT Length = 198 Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 3/131 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R+ PL VQ G P + + ++++L+ PS T + GDSMID GI +G Sbjct: 70 RQFFARPLAEATVQAGMPVAVNETHGEYFVIDEMLVDKPSTTTMITVKGDSMIDAGIHEG 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D+ +V+ A+ GDIV+A VD EFT+K L + R L P N AY P+ I + TL++F Sbjct: 130 DVAVVEKRHVANIGDIVVAIVDNEFTLKTLDKERGQYILRPANPAY-PV-IRPQGTLEIF 187 Query: 129 GVVIHVVKAMR 139 GV++ +++ R Sbjct: 188 GVLVGLIRKYR 198 >UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Chlorobium/Pelodictyon group RepID=Q3B450_PELLD Length = 245 Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V PL+S V G P+ AAD VE +D + + Y + SGDSM+D GI GD Sbjct: 116 VVQVPLYSSAVPAGMPAAAADEVECSVDFPRSWTKGKKNIYALTVSGDSMMDIGIMPGDT 175 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFG 129 L+V++ TA G +VIA+++ E TVK L + V L P N Y PI + + + G Sbjct: 176 LLVEARETARDGQVVIASLNSEVTVKTLCISAGGAVALAPENRKYHPIPVPPDSDFRIMG 235 Query: 130 VVIHVVKAMR 139 VV+ V+ R Sbjct: 236 VVLAAVRQYR 245 >UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X801_OXAFO Length = 140 Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 42/132 (31%), Positives = 71/132 (53%), Gaps = 1/132 (0%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 +L + +T + GFP P D +DLN L+ +P +++ + GDSM GI Sbjct: 8 ELSDSITRNRIENTSVAGFPIPHTDSANTMVDLNAQLLVNPCSSFLFRMKGDSMEGIGIY 67 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLD 126 +GD ++VD +I H IV+ D E+ V++L R TV+L+P N Y P+ ++ L Sbjct: 68 EGDTIVVDRSIDPQHNHIVLGVADQEYLVRRLYKRGRTVRLMPENEKYRPLELTEGRELQ 127 Query: 127 VFGVVIHVVKAM 138 ++GVV ++ + Sbjct: 128 IWGVVTASIRKL 139 >UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8VMP5_PSEPU Length = 143 Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 51/109 (46%), Positives = 64/109 (58%), Gaps = 2/109 (1%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPAADY E I L++LL + + V+ G+SM D GI DG +LIVD +IT G Sbjct: 26 GFPSPAADYYEPPISLDELLNIRAAHVFIVRVEGESMRDAGIFDGGVLIVDRSITPCSGQ 85 Query: 85 IVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGVV 131 IV+A VD + VK+L P L N AY IT ++DVFGVV Sbjct: 86 IVLAYVDNQPLVKRLAKAPGDGWLLESANPAYKTITPDEYASVDVFGVV 134 >UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMQ6_GLOVI Length = 191 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%) Query: 11 EIVTFPLFSDLVQCGFP-SPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL + V G P + D + R+ L++ L++ + T+ ++ GDSMI+ GI +G Sbjct: 64 DLLGIPLLENRVPAGSPVTVEEDLLNSRMSLDEYLVEERTGTFLLRVKGDSMIEAGIFEG 123 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISS 121 D+++V+ A+ GD+VIA VDGE T+K L+ R L P NS YSPI +S Sbjct: 124 DIVVVNQNRRAADGDVVIARVDGEMTLKTLRRRNQQTWLEPANSRYSPIHPAS 176 >UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLH8_ANATD Length = 819 Score = 83.6 bits (205), Expect = 2e-15, Method: Composition-based stats. Identities = 50/130 (38%), Positives = 72/130 (55%), Gaps = 3/130 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 +++T L+ V G P +D ++ L +I P + +K GDSM++ I DGD Sbjct: 692 DVLTINLYEK-VAAGTPVETSDEAIGKVALPTSIISDPERYFAIKVKGDSMVEANIKDGD 750 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFG 129 + IV TA + DIVIA +DGE TVK+ ++ TV LIP NS Y PI I E L + G Sbjct: 751 IAIVQKCNTAENRDIVIAWLDGEITVKRFCKMGSTVLLIPENSKYEPINI-KEGELRIVG 809 Query: 130 VVIHVVKAMR 139 V+ V++ R Sbjct: 810 KVVGVIRKKR 819 >UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW7_CHRSD Length = 145 Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 40/115 (34%), Positives = 71/115 (61%), Gaps = 2/115 (1%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPA DY E +DL++ L++ P++T+F+ GD+ G+ GDLL++D AI+ G Sbjct: 26 GFPSPADDYREAPLDLHRHLVRRPASTFFMHLEGDAHRHAGLHHGDLLVIDRAISPRPGH 85 Query: 85 IVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 ++A +DGE +V +L+ R + + L P + + +D ++GV+ +V+ A+ Sbjct: 86 WLVAVIDGELSVLRLERRQSRLYLAPSQPRLAALPFDPDDA-RLWGVICYVIHAL 139 >UniRef50_A3XM66 SOS-response transcriptional repressors (RecA-mediated autopeptidase)-like n=2 Tax=Flavobacteriaceae RepID=A3XM66_9FLAO Length = 124 Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 36/82 (43%), Positives = 53/82 (64%) Query: 23 QCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASH 82 Q GFPSPA Y+E RIDLN++L ++ AT+F++ GD + I++GD+LIVD ++ AS Sbjct: 23 QTGFPSPATHYLESRIDLNRILTRNRDATFFIRVKGDGYREFQINNGDVLIVDRSMVASR 82 Query: 83 GDIVIAAVDGEFTVKKLQLRPT 104 G + + DGEF + K T Sbjct: 83 GKLAVVVKDGEFKIVKFNRNET 104 >UniRef50_A0L3I3 Putative prophage repressor n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3I3_SHESA Length = 244 Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 45/115 (39%), Positives = 67/115 (58%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GF SPAA Y E+ + LN L++ HPSAT F + + D+M G+ GDLL+VD ++TA+ GD Sbjct: 18 GFESPAAGYQEKALSLNNLIVSHPSATVFAEVTDDAMTGLGLFTGDLLVVDKSLTATRGD 77 Query: 85 IVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 +V+A V GE ++L + N+ IS D +++ GV I V+ R Sbjct: 78 VVLALVHGETVCRQLDDDHDHHQLHANTNAHYSEISVTDGIEIQGVAICAVRFHR 132 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 34/100 (34%), Positives = 57/100 (57%), Gaps = 4/100 (4%) Query: 40 LNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL 99 L+ LL++ +T+ +A G+SM GI GD+LIV +T S GD++IA + EF K L Sbjct: 143 LDDLLVE---STFVGRARGESMTGVGIHSGDILIVSRQLTPSSGDVIIAMYNEEFVCKVL 199 Query: 100 QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 L + +L+ N + P++I +D GVV ++ ++ Sbjct: 200 DLSNS-RLLSANDDFEPVSIRLDDRFWCEGVVPASIRLLK 238 >UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET1_9RHOB Length = 144 Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 46/124 (37%), Positives = 69/124 (55%), Gaps = 1/124 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P+ LV GFPSPA D +E ID +++HP++T++ + GD + D GI DGD++ Sbjct: 16 TVPIHLPLVSAGFPSPAGDDLEDEIDPIAWVVRHPTSTFWWRVEGDCLWDVGIRDGDIIA 75 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI-PMNSAYSPITISSEDTLDVFGVVI 132 VD A G V+A VDG T K L+ R + P NS + I + +++GV+ Sbjct: 76 VDRAGKRRLGRAVLAVVDGTVTAKILRKRDGKYFLSPANSQEAFPDIELTEDSEIWGVIA 135 Query: 133 HVVK 136 VV+ Sbjct: 136 GVVR 139 >UniRef50_Q8P6K4 Polymerase V subunit n=2 Tax=Xanthomonas RepID=Q8P6K4_XANCP Length = 159 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 40/98 (40%), Positives = 63/98 (64%), Gaps = 1/98 (1%) Query: 3 FIKPADLREI-VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 + PA L + + P+ + +Q GFPSPA D+ + +DLN++LI++P AT+ +A G SM Sbjct: 13 LLGPACLDPVPLCLPVSALRIQLGFPSPAEDFQDDELDLNRVLIRNPPATFLYRAEGWSM 72 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL 99 I G+ DGD+L+VD ++ GD+V+A DG V K+ Sbjct: 73 ILAGVCDGDILVVDRSVRPIQGDMVLAIWDGNQPVCKI 110 >UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG3_9SPHI Length = 178 Score = 81.3 bits (199), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 1/105 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P +S V GF SPA Y+E+ DLN+L I + ATYFV+ DSM I GD+L+VD Sbjct: 25 PFYSYYVNAGFASPAESYIERACDLNELCIDNEEATYFVRVGSDSMSGDRIERGDVLVVD 84 Query: 76 SAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITI 119 + S G IV+ +G+ VK++ + V L+ N Y PI + Sbjct: 85 CSKEPSDGKIVVVWYNGDHAVKRIYHVEKMVVLLSSNPKYDPIYV 129 >UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=C6X823_METSD Length = 196 Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 48/112 (42%), Positives = 68/112 (60%), Gaps = 3/112 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GFPS A+ + ++ LI+ PS T + GDSMID GI D++IV+ A+ Sbjct: 80 VQAGFPSAASGDRHDTLSIDDYLIERPSQTVLITVKGDSMIDAGIVPDDVVIVEKRQVAN 139 Query: 82 HGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 GDIV+A VD EFT+K L + + L+P N AY P+ I + L++FGVV+ Sbjct: 140 VGDIVVAIVDNEFTLKTLGREKGQFVLLPANKAY-PV-IRPQGNLEIFGVVV 189 >UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0IYW8_COMTE Length = 136 Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 45/125 (36%), Positives = 69/125 (55%), Gaps = 3/125 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT PL + G SPA D+ +R+D+ LL+ HP AT+ ++ +G SM + GI DGD++ Sbjct: 10 VTLPLADRSARAG--SPANDFAGKRLDITDLLVTHPKATFLLRVAGPSMQEHGIDDGDIV 67 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD + A G IV+A V+ E ++ L T +L Y I TL+++GVV Sbjct: 68 VVDRELRARDGSIVVAVVERELVIRALDSDGDTCKLRAGAPTYPDIVPPEGQTLEIWGVV 127 Query: 132 IHVVK 136 +K Sbjct: 128 TSCIK 132 >UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5N8_9CLOT Length = 475 Score = 80.5 bits (197), Expect = 1e-14, Method: Composition-based stats. Identities = 41/127 (32%), Positives = 78/127 (61%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+ P+F++ + G P D +E + + ++ T+ ++ GDSM++ I DGD Sbjct: 347 ELEDIPMFNN-IAAGTPIEMNDNIEGSFCIPKYWLERGKDTFILRVKGDSMVEKEICDGD 405 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVFG 129 L+++ TA+H +IV A++DGE T+K L L + +L+P NS Y+PI++ +++ +++ G Sbjct: 406 LVVIKKQGTANHNEIVAASLDGEATLKTLNLNGNLPKLMPANSLYAPISLENKE-VNILG 464 Query: 130 VVIHVVK 136 V I ++K Sbjct: 465 VAIGIIK 471 >UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein RulA n=3 Tax=Pseudomonas RepID=Q1XGP5_PSEPU Length = 142 Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 49/116 (42%), Positives = 62/116 (53%), Gaps = 1/116 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L S GFPSPAADY E I L++LL + VK G+SM D GI G LI+D Sbjct: 18 LLSCTAAGGFPSPAADYYEPPISLDELLNIRAPHIWIVKVEGESMRDAGIFTGTRLIIDR 77 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +TA G IV+A VD + VK+L + L N Y +T T++VFGVV Sbjct: 78 TVTACSGHIVMAYVDNQPVVKRLAKSAAGWTLESANPTYKAVTPDEYSTVEVFGVV 133 >UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LEXA_ALCBS Length = 204 Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/117 (40%), Positives = 70/117 (59%), Gaps = 5/117 (4%) Query: 22 VQCGFPSPAADYVEQRIDLNQ-LLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA 80 V G P A + VE+ + + Q L Q P TY +K GDSM+D GI DGDL+ V + A Sbjct: 86 VAAGIPIEAIENVERTVPVPQGLFKQRP--TYLLKVQGDSMVDAGIFDGDLIAVRKSNVA 143 Query: 81 SHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 G+IV+A +D E TVK L+L + + L+P N AY PI + + D L + G+ + +++ Sbjct: 144 RSGEIVVARIDEEVTVKTLKLNKSSATLLPANEAYEPIKVPA-DQLIIEGIFVGLIR 199 >UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GWN0_FLAPJ Length = 148 Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 3/118 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GFPSPA D+VEQ++ L++ I +P+ TY +K G+SM + GD+LIV S + Sbjct: 33 VQAGFPSPAEDFVEQKLSLDEKYISNPNNTYLIKVRGNSMY-PTLQIGDILIVKSDLDLK 91 Query: 82 HGDIVIAAVDG-EFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 I I +++ ++TVK+ R + NS Y I I ED++ GVV ++++ + Sbjct: 92 DNKIAIVSINNSDYTVKRYSKRKKT-FVADNSEYPNIDIEEEDSILCLGVVKNLIRDL 148 >UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S24 n=2 Tax=Comamonadaceae RepID=Q121D8_POLSJ Length = 146 Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 1/116 (0%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V+ GFPSPA D +R++L LL +F+ ASG SM+ GI DGDLL++ Sbjct: 27 VKAGFPSPAEDLGAERLNLASLLGSDKEDAFFMMASGHSMVKFGIFDGDLLLIRKRKRPR 86 Query: 82 HGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 G IVIA VDGEF VK L R V+L+ N + T+ V+GVV +K Sbjct: 87 DGHIVIADVDGEFLVKMLYKRAGQVKLVSGNPEIPDLEPKDGQTIRVWGVVTSSIK 142 >UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQX0_BACS4 Length = 808 Score = 78.2 bits (191), Expect = 7e-14, Method: Composition-based stats. Identities = 52/122 (42%), Positives = 70/122 (57%), Gaps = 3/122 (2%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + V G P+ A + E I L I P+ T+ + +GDSMI GI GD +IV+ Sbjct: 689 PLIGN-VAAGVPTTAEEQYESVIVLPNDWIASPNDTFALTVTGDSMIGAGIDKGDQVIVN 747 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 AS+GDIVIA ++ E T+KK L +V LI NS+Y PI + ED L + G VI V Sbjct: 748 RQNVASNGDIVIAIIEEEATMKKFMLMGDSVLLISENSSYEPIQMKREDVL-INGKVIGV 806 Query: 135 VK 136 +K Sbjct: 807 LK 808 >UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXI2_SYNAS Length = 195 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 3/116 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V GFPSP + + + L++ L+ P A++ ++ SGDSM GI GDL+IV+ Sbjct: 78 VAAGFPSPEEEELRDILSLDEYLVARPDASFLLQVSGDSMTGAGILPGDLVIVEKGREPK 137 Query: 82 HGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +GD+VIA VDGE+T+K + + V L N Y PI I L + GVV VV+ Sbjct: 138 NGDVVIAEVDGEWTMKTFRKEKGEVYLEAANPKY-PI-IRPRQELKLAGVVTGVVR 191 >UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWQ9_9PROT Length = 194 Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 67/110 (60%), Gaps = 3/110 (2%) Query: 24 CGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHG 83 GFPSPA + + I ++ L++HPSAT V+ GDSMI GI+ GD++IV Sbjct: 79 AGFPSPAEEALGDAISIDDYLVEHPSATVLVQVDGDSMIGAGINSGDIMIVRRESRPRVD 138 Query: 84 DIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 I++A VDG+FT+K L+ + L P N AY PI I ++ L ++GVV+ Sbjct: 139 RIIVAIVDGDFTIKYLRKDKQGYFLEPANPAY-PI-IRPDNDLQMYGVVV 186 >UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B6FPF9_9CLOT Length = 200 Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 7/120 (5%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V CG P +Y+E+ + L L + ++ASGDSMI GI+ GD++++ TAS Sbjct: 84 VSCGMPQLEEEYIEEYVSLPVSLFGE-GEFFILRASGDSMIGAGINSGDMIVIRKQNTAS 142 Query: 82 HGDIVIAAVDGEFTVKKLQL---RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 GDIV+A VD E T+K+ L R V+L P N Y I + V GV +HV+K++ Sbjct: 143 DGDIVVALVDNESTLKRFFLDTERRCVRLHPENPKYPDIYTQN---CTVQGVAVHVIKSL 199 >UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK4_9RICK Length = 134 Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 2/127 (1%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ V GFPSPA DY+E I+LN+ LI + ++T+ ++ SG SM++ I DGD+LIV Sbjct: 7 LPIILQKVCAGFPSPATDYLEDEINLNEELISNKASTFLIRVSGYSMVEDHIYDGDVLIV 66 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI--PMNSAYSPITISSEDTLDVFGVVI 132 D ++ H + + G+ VKK+ + + + + I I+ ++ V+GVV Sbjct: 67 DKSLNVKHNSVAVLNYQGQLVVKKIVKKNNKFFLISKLGNHNHFIEITEDNETQVWGVVT 126 Query: 133 HVVKAMR 139 +V+ ++ Sbjct: 127 YVIHKVK 133 >UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHM9_BDEBA Length = 240 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 43/135 (31%), Positives = 79/135 (58%), Gaps = 12/135 (8%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 EI++ PL V G P A + ++ +D+ ++++PS ++ +K GDSMI+ GI D D Sbjct: 107 EILSLPLLGK-VAAGQPIEAIKH-DEFVDVPPSMVRNPSKSFALKVQGDSMIEDGIFDED 164 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---------VQLIPMNSAYSPITISS 121 ++++ +A++GDI++A VD E TVK+ LRP V+L P NS + + Sbjct: 165 IILIQKQNSANNGDIIVATVDNEATVKRFYLRPRPETGDADKMVELRPSNSTMKSMWYTP 224 Query: 122 EDTLDVFGVVIHVVK 136 D +++ G+V+ +++ Sbjct: 225 -DEVEIRGIVVGLIR 238 >UniRef50_B2UKF5 Peptidase S24 and S26 domain protein n=2 Tax=Ralstonia pickettii RepID=B2UKF5_RALPJ Length = 212 Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 4/128 (3%) Query: 14 TFPLFSDLVQCGFPSPA-ADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 T L D V+ GF + A + Q L+QLL+ PS T VK GDSM++ GI GD+ Sbjct: 71 TLELSDDEVRAGFGADGDATGLVQAQALDQLLMAKPSKTVLVKVRGDSMLNVGILSGDVA 130 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V+++ A GDIV+A +DG T+K+ + R +L+ + T++ E TL++ GVV Sbjct: 131 VVETSSQALTGDIVVAEIDGSQTIKEFRNDRGQPRLV--SHGMDGKTVTPEKTLNIIGVV 188 Query: 132 IHVVKAMR 139 +V++ R Sbjct: 189 RGIVRSYR 196 >UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I60_CLOAB Length = 480 Score = 71.6 bits (174), Expect = 7e-12, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 EI P+F++ + G P +E + L + ++ + +K GDSMI+ I+DGD Sbjct: 353 EIEKIPIFNE-IAAGEPILINSQIEDKFYLPRYWVKDAKNCFILKIKGDSMINADINDGD 411 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFG 129 +++ A + DIV +DG T+K+L++ + + +P N YSPI ++ ++ + + G Sbjct: 412 CVVIKKTGAAENRDIVAVNIDGSATLKRLKMDKDGIAFMPENELYSPIKVTEDEQVMLIG 471 Query: 130 VVIHVVKA 137 + + V+K+ Sbjct: 472 IAVGVLKS 479 >UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=LEXA_PELCD Length = 202 Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 2/93 (2%) Query: 49 SATYFV-KASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQ 106 S +FV + +GDSMI GI DGD ++V TA HG V+A +D E TVK+L R ++ Sbjct: 108 SGEHFVLRVAGDSMIGDGIIDGDYVVVRKQATAEHGQTVVALLDNEATVKRLHRRNDRIE 167 Query: 107 LIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 L P N + PI ++ D + GVV+ V++ R Sbjct: 168 LHPANPSMQPIVVTDPDNFRIEGVVVGVIRHYR 200 >UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=B3E774_GEOLS Length = 209 Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 6/138 (4%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 ++PA+ V+ P+ +V+ G +PA + ++ ++ + ++ +F++ SGDSMI Sbjct: 75 LVRPAN--RSVSLPVVG-VVRAGHLAPAIEDIQGHFAVDPMAVKGDDC-FFLRVSGDSMI 130 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISS 121 + GI DGDL +V TA + D V+A +DGE T+K + R ++L P N PI I Sbjct: 131 NAGILDGDLAMVRPQQTAGNKDTVVAMIDGEVTLKWFYRERDHIRLQPANPNMEPIIIRP 190 Query: 122 ED-TLDVFGVVIHVVKAM 138 ED L + G VI V + M Sbjct: 191 EDGELSIVGKVIGVYRRM 208 >UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Alphaproteobacteria RepID=B8IDM4_METNO Length = 171 Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 1/131 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 AD +V P + GFPS A D+ E ++L + L +P+AT+ + G M GI Sbjct: 11 ADWSGLVRIPFMRTTLCAGFPSSAEDFTEGALELPRWLAPNPAATFIWRVRGWCMKGAGI 70 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSP-ITISSEDTL 125 D DL +VD ++ S G +V+A V+GE ++K+L L + ++ P + + Sbjct: 71 HDQDLAVVDRSLHPSPGAVVVAIVNGEMSLKRLVLDGNRLALTFDNPEMPAFGLEDLEEC 130 Query: 126 DVFGVVIHVVK 136 ++GV++ V+ Sbjct: 131 QIWGVLLFSVR 141 >UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0D8_METFK Length = 194 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GF +PA + ++ LI+ PS T + GDSM D GI DGD++IV+ A+ Sbjct: 78 VQAGFATPAYGDSLDTMGIDDYLIEKPSQTILITVRGDSMKDAGIFDGDVVIVEKRPFAN 137 Query: 82 HGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 GDIV+A ++ EFT+K L LIP N + P+ I E ++FGVV+ Sbjct: 138 VGDIVVAILNKEFTLKTLGKEGNQFVLIPANKDF-PV-IRPEGDFEIFGVVV 187 >UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID=LEXA_DESDG Length = 207 Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 1/77 (1%) Query: 57 SGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYS 115 GDSMID GI+DGDL+IV A GDIVIA +D E TVK+L++ ++L+P N Sbjct: 126 QGDSMIDAGINDGDLIIVRRQPIAEDGDIVIALLDDEATVKRLKIDNELIELVPENPRLK 185 Query: 116 PITISSEDTLDVFGVVI 132 PI + ED L + G V+ Sbjct: 186 PIRVKPEDELRILGKVV 202 >UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7U7_NATTJ Length = 815 Score = 70.5 bits (171), Expect = 2e-11, Method: Composition-based stats. Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 2/104 (1%) Query: 34 VEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGE 93 ++ ++L + ++ +P + ++ +GDSMI+ GI GD +IV A + DIV+A +D E Sbjct: 712 IQGDVELPKEIVPNPDNCFMLEVTGDSMINAGIDKGDYVIVQKQNYAENLDIVVAVIDQE 771 Query: 94 FTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 T+KK ++ T+ L+P N Y PI +S ED L + G VI V+K Sbjct: 772 ATLKKYSRMGDTILLMPENKNYEPIIVSEED-LIINGKVIGVLK 814 >UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I583_THIIN Length = 243 Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 13/133 (9%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA-----TYFVKASGDSMIDGG 65 E + PL V G P A +++EQ ++++ P A Y +K G SM D G Sbjct: 115 EQLCLPLVGR-VAAGHPILAQEHIEQTLNVD------PGAFSVRPDYLLKVRGMSMRDAG 167 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 I DGD+L V S+ TA G IV+A + E TVK+L+L+ ++L+P N ++PI + + Sbjct: 168 ILDGDMLAVKSSQTAQSGQIVVARIGDEVTVKRLRLQADHIELLPANPEFAPIRVDASQP 227 Query: 125 LDVFGVVIHVVKA 137 + G+ + +++ Sbjct: 228 FAIEGLAVGLLRG 240 >UniRef50_A9KZQ7 Putative uncharacterized protein n=2 Tax=Shewanella baltica RepID=A9KZQ7_SHEB9 Length = 91 Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%) Query: 23 QCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASH 82 GF S AA+Y + + L++LL+QHPS+TY GD M+ GI DGDLLIVD ITA H Sbjct: 17 NSGFESLAAEYQQLSLSLDELLVQHPSSTYVEITEGDLMLGEGIYDGDLLIVDRHITAQH 76 Query: 83 G-DIVIAAVDGEFTV 96 G D ++ V+ + Sbjct: 77 GADFILLIVNSRLLI 91 >UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4P0_9GAMM Length = 202 Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 67/123 (54%), Gaps = 8/123 (6%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT P+ + AD E IDL+ + + +K +GDSMID I GD + Sbjct: 78 VTLPVMGKIAAGRLVEAVAD--ESEIDLSDMFT--GKGRFVLKVNGDSMIDKAIMSGDYV 133 Query: 73 IVDSAITASHGDIVIAAVDG-EFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFG 129 +V S TA HGDIV+A VDG + T+K L L TV L+P NS Y +T+ + D + V G Sbjct: 134 VVQSQSTARHGDIVVALVDGFDATLKTLLLNDDGTVTLMPANSHYEAVTLPA-DRVRVQG 192 Query: 130 VVI 132 +V+ Sbjct: 193 IVV 195 >UniRef50_A2TQY9 SOS-response transcriptional repressors (RecA-mediatedautopeptidase)-like n=1 Tax=Dokdonia donghaensis MED134 RepID=A2TQY9_9FLAO Length = 118 Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 38/106 (35%), Positives = 55/106 (51%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 +P ++ VT + VQ GFPSPA Y E IDLN+ L AT+FV+ GDS Sbjct: 4 EPQKVKRAVTDYSGNRSVQTGFPSPATHYREPMIDLNKELSSSRDATFFVRVKGDSWKSH 63 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPM 110 I D D+LI+D A A G + + + F V+++ ++L M Sbjct: 64 NILDKDVLIIDRAQVAQEGKLALVITEEGFDVQRINASKPIELWGM 109 >UniRef50_C3X958 DNA polymerase V n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X958_OXAFO Length = 139 Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 3/91 (3%) Query: 17 LFSD--LVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 +FS+ + QC FP P D IDLN++L ++ + +A+ D M + GI GD+++V Sbjct: 17 IFSEEIMTQC-FPVPHTDSANSGIDLNEILNIRKNSCFLFRAATDDMNETGIFKGDIVVV 75 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTV 105 D +I A H +IV+ +DGEF++++L R V Sbjct: 76 DKSIPARHANIVLVVMDGEFSIRRLFKRGRV 106 >UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12_DICT6 Length = 199 Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E++ PL ++ G P + +Y+E+ I + + ++ P ++ +K GDSM I DGD Sbjct: 75 EVIYLPLIGT-IRAGIPVESPEYIEEYIPVPKNFVKIPEKSFLLKVRGDSMEGAHILDGD 133 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVFG 129 L+IV TA G+IV+A DGE TVK L + L P N YS I + G Sbjct: 134 LIIVQKQDTAQKGEIVVALKDGESTVKFLSENYGIPCLKPANPRYSEIY----PPFKIIG 189 Query: 130 VVIHVVKAMR 139 V+ V++ + Sbjct: 190 KVVGVIRLFK 199 >UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T6T4_BURPP Length = 199 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V+ G P P + + ++ L+ P+ T + G+SM D G+ DGDL++V+ Sbjct: 81 VRAGQPQPEGQEPPELLTIDDYLVDDPNRTVLCRVRGESMRDVGLLDGDLVVVEKNRPTR 140 Query: 82 HGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 GDIV+A VDGE TVK L+L L P N + I + +L++ GVV+ V+ Sbjct: 141 PGDIVVAVVDGEMTVKTLRLDKNGAYYLEPANQDFQ--VIRPQGSLEIVGVVVGSVR 195 >UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 Length = 202 Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R ++ PL V G P A + +E I L L+ A + ++ GDSMID GI D Sbjct: 78 RNVIRLPLVGK-VTAGEPILAVENIEDTITLPYDLVGTEDA-FLLRVKGDSMIDAGIFDN 135 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D++IV A +GDIV+A +D E TVK+ + ++L P N A PI + + + Sbjct: 136 DIIIVKRQNVAENGDIVVALIDDEATVKRFFKESDHIRLQPENKAMEPIIVKD---VKIL 192 Query: 129 GVVIHVVKAM 138 G VI +++ M Sbjct: 193 GKVIGLIRRM 202 >UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERE0_9BACT Length = 205 Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 37/87 (42%), Positives = 54/87 (62%), Gaps = 1/87 (1%) Query: 51 TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIP 109 ++F++ GDSM D I DGD ++V S A GDIV+A +DGE TVK+L + + L P Sbjct: 115 SFFLRVRGDSMKDAAILDGDYVLVSSRPDAKPGDIVVAMIDGESTVKRLSRKGDRLVLSP 174 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 NSAY I I ++ + GVV+ V++ Sbjct: 175 ENSAYPDIPIPTDTDFRITGVVVGVIR 201 >UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ7_9GAMM Length = 196 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 8/121 (6%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL + G P A + +Q++DLN L S Y ++ GDSM++ GI DGD ++ Sbjct: 74 TLPLMGRIA-AGQPIEAVND-QQQLDLNSLFA--GSNRYALQVKGDSMVEAGICDGDWVV 129 Query: 74 VDSAITASHGDIVIAAVDGE-FTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGV 130 ++SA TA +GDIV+A VD E T+K + R V LIP NSA + + E+ + + G+ Sbjct: 130 IESAQTARNGDIVVALVDDEDATLKTIDYRAGGQVALIPSNSAMEAM-VYPEERVQIQGI 188 Query: 131 V 131 + Sbjct: 189 L 189 >UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 RepID=LEXA_MAGSM Length = 231 Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 10/134 (7%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSAT---YFVKASGDSM 61 K D+ +V P+ + V G P A + + +LL+ +A + +K GDSM Sbjct: 94 KKPDVARLVPVPIIGE-VAAGIPILAVEN-----HIGELLMDSRTARGPCFALKVKGDSM 147 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITIS 120 ID I +GD ++V A +GDIV+A +DGE TVK+L + T++L P N +Y PI + Sbjct: 148 IDAEIFEGDYVVVRHQALAENGDIVVAILDGEATVKRLYISEETIELRPENRSYQPIVVP 207 Query: 121 SEDTLDVFGVVIHV 134 + + G V+ V Sbjct: 208 PGGDIRILGKVLAV 221 >UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEXA_ACIC1 Length = 275 Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 ++V PL + G P+ A +E + L + L+ + ++ GDSM+D I DGD Sbjct: 152 DVVAVPLVGRIA-AGGPALAEQLIEDVVPLPRQLVGE-GTLFLLQVKGDSMVDAAICDGD 209 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFG 129 ++V A +GDIV A +DGE TVK + R + L+P N Y PI D + G Sbjct: 210 WVVVRQQPVAENGDIVAAMIDGEATVKTFKRRGAHIWLMPHNPQYEPI---PGDEATILG 266 Query: 130 VVIHVVKAM 138 V+ V++ + Sbjct: 267 RVVAVLRRL 275 >UniRef50_UPI0000382BE7 COG1974: SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382BE7 Length = 133 Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/115 (32%), Positives = 65/115 (56%), Gaps = 5/115 (4%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD--GDLLIVDSAITASH 82 GFPSPA D+VE ++L + L+ +P AT+ + S D D DL V+ ++ H Sbjct: 11 GFPSPADDFVENALELPRWLVPNPPATFLWRIS--RRFDARSWDLRRDLACVERSLKPDH 68 Query: 83 GDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSE-DTLDVFGVVIHVVK 136 G +V+AAVDGE ++K++ + + +++ P+ + E +DV+GVV ++ Sbjct: 69 GSVVVAAVDGEMSIKRMVVEGNTARLSVDNPELPVFATEELAEVDVWGVVHFTIR 123 >UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum RepID=C4IFP8_CLOBU Length = 563 Score = 66.6 bits (161), Expect = 2e-10, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 2/129 (1%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + E+VT P+F++ + G P D VE ++ + I+ + +K GDSM+ I+D Sbjct: 433 VEEVVTIPVFNE-IAAGSPILMNDEVEYSCNIPKSWIRGTKDLFILKIKGDSMVKKNIND 491 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 GD ++++ D+V ++GE T+K + + V L P N Y PI ++ E + Sbjct: 492 GDHVLINKNKYPCANDVVAVEIEGEATLKTFKTKGKYVILKPENDKYDPIILNGEQEYSI 551 Query: 128 FGVVIHVVK 136 GV + ++K Sbjct: 552 LGVAVGILK 560 >UniRef50_Q2Y5T8 Putative prophage repressor n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5T8_NITMU Length = 210 Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 41/123 (33%), Positives = 69/123 (56%), Gaps = 7/123 (5%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V+ G P AD + + ++ LI+ PS T GDSMID GI +GD++I++ + +AS Sbjct: 77 VRAGRPQQTADVQPELLRIDDYLIEKPSQTILFPVKGDSMIDLGILEGDIVIIERSSSAS 136 Query: 82 HGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSA----YSPITISSEDTLDVFGVVIHVVK 136 G++V+A VD EFT+K L + + L N A Y P I + L+++G + + + Sbjct: 137 PGEVVLAIVDSEFTLKVLARDKEGYYLEARNEARGKEYPP--IRPQQKLEIYGFYVGLFR 194 Query: 137 AMR 139 ++ Sbjct: 195 KIQ 197 >UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5D0_SLAHD Length = 230 Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F+ + +V P+ + V G P A +++ I L ++ S+++ +K GDSMI Sbjct: 98 FVGQGEFSNVVNLPVVGN-VAAGVPILAEQNIQETIPLPTEIVGD-SSSFLLKVRGDSMI 155 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISS 121 + GI+DGD ++V A++GDIV+A V+ TVK+ + R ++L P NS PI + Sbjct: 156 EIGINDGDFVVVKEQPNANNGDIVVALVEDGATVKRFFKERDHIRLQPENSTMEPIIV-- 213 Query: 122 EDTLDVFGVVIHVVKAM 138 + + + G V+ V + + Sbjct: 214 RENVSIAGKVVAVFRRL 230 >UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR Length = 201 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 71/120 (59%), Gaps = 3/120 (2%) Query: 21 LVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA 80 +V+ G PA + +E +++ L++ +F++ GDSMI+ GI GDL +V TA Sbjct: 82 VVRAGALQPAIEDIEGYFAVDRALVKGADC-FFLRVKGDSMIEAGIRSGDLALVRPQATA 140 Query: 81 SHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSE-DTLDVFGVVIHVVKAM 138 +GDIV+A ++ E T+K+ + + ++L P NSA PI + ++ +++ G V + +++ Sbjct: 141 DNGDIVVARINDEATLKRFFREKDRIRLQPENSAMEPIIVKAKAGEVNIIGKVTGIFRSL 200 >UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9V2_9FIRM Length = 214 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E+V PL V G P A +++E + L+ + + GDSM D GI D Sbjct: 87 KEVVGVPLVG-AVHAGDPILADEHIEDMYPIPTELLGTKDDVFMMVVEGDSMKDAGILDR 145 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A +GDIV+A ++GE T K R ++L+P NSAYSPI D + + Sbjct: 146 DYVFVRRQDYAQNGDIVVALLNGEETTIKRYFRELKQIRLVPENSAYSPIV--GTDNIKI 203 Query: 128 FGVVIHVVKAM 138 GVV+ V + + Sbjct: 204 TGVVVGVFRVL 214 >UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEXA_STRM5 Length = 211 Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%) Query: 48 PSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQ 106 P+ Y +K GDSMID GI DGDL+ V A G IV+A +D E TVK L++ + ++ Sbjct: 119 PAPDYLLKVQGDSMIDEGIFDGDLIGVHRTRDAHSGQIVVARIDDEITVKLLKIAKDRIR 178 Query: 107 LIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 L+P N Y PI + + + G+ +++ R Sbjct: 179 LLPRNPDYKPIEVLPDQDFSIEGLYCGLLRPNR 211 >UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA_THENN Length = 207 Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + ++ G A +Y+E I++ + + ++ G+SMI+ I DGDL+++ Sbjct: 76 PLIGE-IRAGEKKEAIEYLEDYIEVPGSFLSSGYEHFLLRVKGESMIEEHICDGDLVLIR 134 Query: 76 SAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A +GDIV A V+GE T+KK Q V+L P N SP+ + D + + G V+ V Sbjct: 135 RQDWAQNGDIVAAMVEGEVTLKKFFQRGEMVELRPANKEMSPMFFRA-DRVKILGKVVGV 193 Query: 135 VK 136 + Sbjct: 194 FR 195 >UniRef50_A6ET81 Peptidase, S24 family, UV repair protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6ET81_9BACT Length = 126 Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 13/114 (11%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GFPSPA Y+E IDL+Q LI + AT+FV+ S + I + +LI+D + A Sbjct: 22 VQTGFPSPATHYLEPTIDLHQELITNADATFFVRVSSNEYAHLKIYNEAVLIIDRSTPAL 81 Query: 82 HGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 G + + +DGEF++ K +P++ S + T ++GV+ +V+ Sbjct: 82 KGKLALVIIDGEFSIIK---------VPVSQGGS----EAHKTFTLWGVINYVI 122 >UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWK1_CLOB8 Length = 512 Score = 65.5 bits (158), Expect = 6e-10, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 ++V P+F++ + G P +Y+E L + I+ + +K GDSMI+ I DGD Sbjct: 386 DVVNIPVFNE-IAAGNPILINEYIEDSYSLPKDWIRTSKDVFMLKVKGDSMINKNIYDGD 444 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFG 129 +++ DIV ++GE T+K + + + LIP N Y PI I + +V G Sbjct: 445 YVVISKQNMPRIKDIVAVDIEGEATLKTYKVIDGKIALIPENDKYQPIIIEDQQ-FNVLG 503 Query: 130 VVIHVVK 136 V I ++K Sbjct: 504 VAIGLIK 510 >UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_ANADF Length = 231 Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 +KPA +V P+ V G P A + VE + ++ L+ Y ++ GDSMI Sbjct: 96 LKPAG--RLVEIPILGR-VAAGQPILAQERVEDTVQVDSFLLGTNKKVYGLRVQGDSMIG 152 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI GD + V + A GDIV+A +D E TVK++ V+ P N +PI + Sbjct: 153 DGILPGDYIFVKKQLHAEDGDIVVAMIDEEATVKRVYFEGDRVRFQPSNPRMAPIYVRGS 212 Query: 123 D--TLDVFGVVIHVVKAM 138 D T + GVV+ V + + Sbjct: 213 DFRTTMILGVVVGVYRKL 230 >UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID=B8GQJ6_THISH Length = 154 Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 74/136 (54%), Gaps = 10/136 (7%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P D EI PL V G P E+R+ + +++ TY ++ G SMID Sbjct: 27 PVDTCEI---PLLG-WVAAGLPVDLCSN-EERVSVPAHMVRR--NTYALRVRGHSMIDDN 79 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQL-RPTVQLIPMNSAYSPITISSED 123 I DGD+++V+ +A +G V+A ++GE T+KK + R ++L P N PI + +E+ Sbjct: 80 IQDGDIIVVERRQSAENGQTVVAMINGEQVTLKKFYVEREGIRLQPANPDMEPIILRNEE 139 Query: 124 TLDVFGVVIHVVKAMR 139 +++ G+V V++ MR Sbjct: 140 -IEILGIVTGVIRDMR 154 >UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNT7_FIBSS Length = 217 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 5/120 (4%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G P A +E + +++ + S + ++ GDSMI+ GI DGDL+ TA Sbjct: 99 VAAGTPILAVQNLEGTVTIDRDFLACRSDVFALRVKGDSMINAGIFDGDLIFARQQKTAD 158 Query: 82 HGDIVIAAVDGEFTVKKLQLRPT---VQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G+IV+A +D E TVK P+ V+L P N Y PI +++ + G VI V++ + Sbjct: 159 LGEIVVAQIDNEATVKYYH--PSADHVELRPANPKYKPIIVNNRKDFSIAGRVIGVMRKV 216 >UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=LEXA_SYNFM Length = 206 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 2/90 (2%) Query: 51 TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIP 109 + ++ GDSMI+ GI +GD+LIV A +G V+A V GE TVKK R ++L P Sbjct: 111 NFALRVKGDSMIEEGIREGDILIVARQSRAENGQTVVALVQGEATVKKFYQRGEEIELRP 170 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 NS PI + D ++V G V+ +++ R Sbjct: 171 ANSRMQPIHARA-DAVEVVGTVVGLLRNYR 199 >UniRef50_B0C5G0 SOS mutagenesis protein UmuD, putative n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C5G0_ACAM1 Length = 81 Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 1/76 (1%) Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSED 123 GI GDLLIVD ++T G +VIA ++GEFTVK+L+L + T+ L N+ Y+PI + + Sbjct: 5 GIFSGDLLIVDRSLTPVDGAVVIAVLNGEFTVKQLRLSQKTILLAAANADYTPIVVKAGM 64 Query: 124 TLDVFGVVIHVVKAMR 139 V+GVV +VV ++ Sbjct: 65 EFQVWGVVTYVVHGLQ 80 >UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM Length = 258 Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 1/80 (1%) Query: 58 GDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSP 116 GDSM++ GI DGD + V A G VIA V+G T+KK ++ ++QL+P NSA SP Sbjct: 168 GDSMVEMGIMDGDYVAVHQQAVAETGQTVIAEVNGSITIKKYVRKGNSIQLLPANSAMSP 227 Query: 117 ITISSEDTLDVFGVVIHVVK 136 I +S +D + GV++ ++ Sbjct: 228 IAVSEDDEFHIRGVLVGSMR 247 >UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZXB0_SORMA Length = 299 Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 5/111 (4%) Query: 24 CGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHG 83 GFPSPA D+ E IDL LL +A++ + SG SMID GI D D+++VD T G Sbjct: 20 AGFPSPAQDWEETAIDLVALLRLDRAASFVFRVSGQSMIDAGIYDDDVVVVDRDATPVSG 79 Query: 84 DIVIAAVDGEFTVKKLQLR---PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 IVIA VDG F +++L R P ++ Y + ++++++V+GVV Sbjct: 80 RIVIAVVDGGFVIRQLVWRDGKPVLEARNARMRYDAVI--ADESVEVWGVV 128 >UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232_CLOBH Length = 535 Score = 63.5 bits (153), Expect = 2e-09, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 3/128 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+ P+F+D + G P VE ++ + ++ + +K GDSMI I DGD Sbjct: 409 ELTKLPVFND-IAAGEPILMNPCVEGEFNIPKYWVRGMKNCFILKVKGDSMIGANIEDGD 467 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFG 129 +++ A + DIV +DG T+K+L ++ + L+P N Y PI I E+ + G Sbjct: 468 HVVIKRQQMAENKDIVAVNLDGSATLKRLLIKKSGAVLMPENKKYKPIEI-LEEGASIIG 526 Query: 130 VVIHVVKA 137 + + ++K Sbjct: 527 IAVGIIKG 534 >UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXW1_9BACT Length = 209 Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 3/126 (2%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+ V G P + + + + ++ ++ +F+K G+SM I DGD Sbjct: 79 LVEVPILGQ-VAAGLPILSEENLSGHLSVDPAWVRK-GPVFFLKVHGESMKGAAILDGDY 136 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGV 130 ++V TA +G IV+A +DGE TVK+L+ R + L+P N + I + E + + G+ Sbjct: 137 VLVRQQETADNGQIVVATIDGETTVKRLRQRGDQLSLLPENPDFPEIPVRKEGSFRIIGL 196 Query: 131 VIHVVK 136 V+ V + Sbjct: 197 VVGVFR 202 >UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TFZ8_HELMI Length = 260 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + V G P AA+YVE + + + ++ + ++ GDSMID GI GD +IV Sbjct: 141 PLLGN-VAAGSPILAAEYVEDYLPIAKSMLGE-GEFFGLRVKGDSMIDAGILHGDTVIVR 198 Query: 76 SAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 AS+G IV+A +D + TVK+ + V+L P NSA PI + L + G V+ V Sbjct: 199 RQAHASNGQIVVALIDDDATVKRFFKEADHVRLQPENSALEPIRVRD---LSILGKVVMV 255 Query: 135 VK 136 ++ Sbjct: 256 LR 257 >UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=LEXA_GEOBB Length = 201 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 7/122 (5%) Query: 21 LVQCGFPSPAADYVEQR--IDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAI 78 +V+ G PA +E ID +QL +F++ GDSM+ I +GDL +V Sbjct: 82 VVRAGLLHPAIQDIEGHFAIDRSQLA---SGGAFFLRVKGDSMVHAHIVEGDLALVRPQP 138 Query: 79 TASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISS-EDTLDVFGVVIHVVK 136 AS+ DIV+A VDGE T+K+ ++L P N Y PI I E + + G V+ + + Sbjct: 139 HASNRDIVVAMVDGEATLKRFYREADRIRLQPENPNYEPIIIEKGEQEVSIVGKVVGIYR 198 Query: 137 AM 138 M Sbjct: 199 QM 200 >UniRef50_A3SCV4 UmuD protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCV4_9RHOB Length = 102 Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 3/96 (3%) Query: 43 LLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR 102 +++HPS+T++ + GD + D GI DGD++ VD A G V+A VDG T K L+ R Sbjct: 3 WVVRHPSSTFWWRVEGDCLWDAGIRDGDIIAVDRAGKRRIGRAVLAVVDGAVTAKILRKR 62 Query: 103 P-TVQLIPMNSAYS-PITISSEDTLDVFGVVIHVVK 136 L P NS P +ED+ +++GV+ VV+ Sbjct: 63 GDRYYLAPANSQEQFPDVELTEDS-EIWGVIAGVVR 97 >UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEXA_POLSJ Length = 234 Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G P A +++EQ L Q Y +K G SM D GI DGDLL V A A Sbjct: 115 VAAGSPILAQEHIEQTYYFESSLFQR-QPDYLLKVRGMSMRDAGIIDGDLLAVKQAKEAR 173 Query: 82 HGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +G IV+A + E TVK+ + + ++L+P N + I + + ++ G+ + +++ Sbjct: 174 NGQIVVARIGDEVTVKRFRRTKHLIELLPENPDFKTIVVEPGEPFELEGLAVGLIR 229 >UniRef50_UPI00016C36BD LexA repressor n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36BD Length = 243 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 61/104 (58%), Gaps = 4/104 (3%) Query: 35 EQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEF 94 +QR+++ +L + VK G SMI+G I+DGD +++ A T +G+ V+A ++ Sbjct: 140 DQRLEMRELF--GSEDLFVVKVRGTSMIEGHIADGDFVVIRKAETCENGEKVVAMIEKAM 197 Query: 95 TVKK-LQLRPTVQLIPMNSAYSPITIS-SEDTLDVFGVVIHVVK 136 T+KK + + +QL PMNS PI + S + + + G++ V++ Sbjct: 198 TLKKYYKKKNEIQLHPMNSTMEPIIVDPSREDIRILGILAGVIR 241 >UniRef50_A7MJJ4 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MJJ4_ENTS8 Length = 89 Score = 62.0 bits (149), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/68 (42%), Positives = 43/68 (63%) Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 ++VD ++ A H DI++A++ GEFT+K+L P QL N AY PI + D LD+ GVV Sbjct: 1 MLVDFSLHAKHNDIMVASIGGEFTIKRLVTYPVAQLRAENPAYPPIAVYDADDLDIVGVV 60 Query: 132 IHVVKAMR 139 I V+ + Sbjct: 61 ICVIHTLH 68 >UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_VEIPT Length = 223 Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 5/116 (4%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ G P A + +E + L + + S + ++ G+SM++ G+ +GD+LIV TA+ Sbjct: 109 VQAGMPITAVENLESTLTL-PVQLTGDSDCFLLRVQGESMMNIGMYEGDMLIVRHQNTAN 167 Query: 82 HGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +GD+V+A +D E TVK+ + ++L P N + PI + D + G+VI +V+ Sbjct: 168 NGDVVVARIDDEATVKRFYKENGHIRLQPENDDFDPIIV---DDCHIEGLVIGLVR 220 >UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP Length = 196 Score = 61.6 bits (148), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 42/125 (33%), Positives = 62/125 (49%), Gaps = 6/125 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL + G P PA +Y E + L L + ++ G+SM++ GI DGDL+ Sbjct: 74 VAVPLLGR-IAAGQPHPAVEYREDVLLLPAELTGS-GECFALRVRGESMVEAGILDGDLV 131 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V TA +GDIV A V GE TVK+ ++L P N PI D + G V Sbjct: 132 VVRRQPTAENGDIVAALVAGEATVKRFYREDGRIRLQPENRTMRPIFT---DEAAILGKV 188 Query: 132 IHVVK 136 + +++ Sbjct: 189 VALIR 193 >UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0SJ79_RHOSR Length = 247 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 47/126 (37%), Positives = 71/126 (56%), Gaps = 8/126 (6%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMIDGGISDGDL 71 VT P+ D + G P A ++ ++ + L + L+ S T F ++ G+SMID I DGD+ Sbjct: 126 VTVPVVGD-IAAGAPILAEEHADEMLTLPRELVG--SGTVFGLRVRGESMIDAAICDGDV 182 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 ++V A G+IV A +DGE TVK L+ R V L P N AY+ I +D + V G Sbjct: 183 VVVRRQDEAHSGEIVAAMIDGEATVKVLRRRDGHVFLEPRNPAYA--VIDGDDAV-VLGK 239 Query: 131 VIHVVK 136 V+ V++ Sbjct: 240 VVSVMR 245 >UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF130_AEPn_1 RepID=D0E8J3_9BACT Length = 204 Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 33/89 (37%), Positives = 55/89 (61%), Gaps = 3/89 (3%) Query: 51 TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIP 109 ++ ++ GDSM D GI + DL+ V+ +GDIV+A V+ E T+K + V +LIP Sbjct: 114 SFVLRVRGDSMKDAGIYEDDLVYVEQKALPRNGDIVVALVENEATIKVYENHENVIRLIP 173 Query: 110 MNSAYSPITISSED--TLDVFGVVIHVVK 136 NS+Y + +SED +++ GVV H+++ Sbjct: 174 RNSSYKVQSFNSEDEHRINIVGVVKHLLR 202 >UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEK1_9ACTN Length = 232 Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/128 (33%), Positives = 71/128 (55%), Gaps = 5/128 (3%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 IVT P+ + V G P A + + I L ++ S+ + ++ G+SMI+ GI+DGD Sbjct: 109 IVTLPVVGN-VAAGQPILAEQNITETIPLPTEIVGDGSS-FLLQVRGESMIEIGINDGDF 166 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 ++V TA +GD+V+A +D TVK + R ++L P NSA PI + D + + G Sbjct: 167 VVVQEQPTARNGDVVVAIIDDGATVKTYYRERDHIRLQPENSAMEPIIV--RDDVSIAGK 224 Query: 131 VIHVVKAM 138 V+ + + M Sbjct: 225 VVALFRRM 232 >UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE Length = 215 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 5/130 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + + L +Q+ A + ++ G+SMID GI D Sbjct: 90 REMVDVPVVG-RVTAGQPILAVENITDTFPLPVDFVQNSDA-FMLRIQGESMIDAGILDK 147 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V +A++GDIV+A + E T K + + ++L P NS+ PI + +D L + Sbjct: 148 DFVLVRQQSSANNGDIVVALIGDEATCKTFYREKDHIRLQPQNSSMEPIVV--KDELSIL 205 Query: 129 GVVIHVVKAM 138 G VI V + M Sbjct: 206 GKVIGVFRRM 215 >UniRef50_UPI0001BC9EB9 ultraviolet light resistance protein A n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9EB9 Length = 131 Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 2/116 (1%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P +S + GF +PAA ++EQ +L+ Y + DSM GI D DL+ V Sbjct: 16 LPFYSFRIPTGFSNPAAAHIEQDFSSGRLMDVRAPYIYVAQIDSDSMRGIGIFDADLIAV 75 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFG 129 D ++ A H IVIAAV+GE K+L ++ V L N +Y+ I + L +FG Sbjct: 76 DRSLKAGHKSIVIAAVNGEPMCKRLCIKGDDVSLQSENPSYAAKYILKGEEL-MFG 130 >UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LEXA_BIFAA Length = 257 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 5/118 (4%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A +V+ + L + L + ++ GDSMID I DGD ++V +A Sbjct: 144 IAAGVPITAEQHVDDVMRLPERLTG-TGNLFMLEVHGDSMIDAAICDGDFVVVREQNSAE 202 Query: 82 HGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 +GDIV A +D E TVK + V LIP N AYSPI + ++ G V+ V++ + Sbjct: 203 NGDIVAALLDDEATVKTFRKDHGHVWLIPHNPAYSPIDGTH---AEIMGKVVTVLRKI 257 >UniRef50_D2QCM1 SOS-response transcriptional repressors (RecA-mediated autopeptidase)-like protein n=3 Tax=Bacteria RepID=D2QCM1_9SPHI Length = 81 Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 29/63 (46%), Positives = 40/63 (63%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL V GFPSPA D++E +DL L++ P+ T+ V+A G SM GI DGD+L+V Sbjct: 12 LPLLICKVSAGFPSPADDHLEGDLDLYDFLVKKPATTFLVRAKGQSMQGIGIYDGDVLVV 71 Query: 75 DSA 77 D + Sbjct: 72 DRS 74 >UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G107_9DELT Length = 207 Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 6/131 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLI-QHPSATYF-VKASGDSMIDGGISDGD 70 V+ P+ V G P A + + R+ +++ + + PS F + GDSMI+ GI DGD Sbjct: 77 VSIPILGQ-VAAGQPILAQENISDRVTIDRFFVGKAPSKEVFGLVIRGDSMIEDGIYDGD 135 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSED--TLDV 127 + V TA +G+I + ++GE T K++ V+L P N +PI + + +DV Sbjct: 136 YIFVRKQSTAENGEIAVVMIEGEATCKRVFHEGDRVRLQPANETMAPIYVHRSEFRAIDV 195 Query: 128 FGVVIHVVKAM 138 G V+ V + + Sbjct: 196 IGKVVGVYRKL 206 >UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM Length = 214 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/129 (28%), Positives = 71/129 (55%), Gaps = 6/129 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+++ PL + V G P A + ++++ L + + + + GDSMI+ GI GD Sbjct: 91 ELISIPLLGE-VAAGVPLLAVENYDEKVTLPRSFTGY-GEFFMLSVRGDSMIEAGILPGD 148 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFG 129 L++V + S+GDI +A ++ E TVK+ + + ++L P NS SPI + + + G Sbjct: 149 LVLVRRQESVSNGDIAVALLEDEATVKRFYKEKNRIRLQPENSLLSPIYVQE---VKILG 205 Query: 130 VVIHVVKAM 138 V+ +++ + Sbjct: 206 KVVGLMRKI 214 >UniRef50_Q4ZV62 Peptidase S24, S26A and S26B n=6 Tax=Pseudomonas syringae group RepID=Q4ZV62_PSEU2 Length = 147 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 6/123 (4%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLL-IQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 F L G SP VE+ + + +L ++ P A Y + M G+ GD+L+VD Sbjct: 18 FISLSSVGSRSPV---VEKHVSIAELCEVREPHA-YLARIEDQGMQGSGMCSGDMLVVDR 73 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPTVQLIP-MNSAYSPITISSEDTLDVFGVVIHVV 135 + A HGDIV+A+++ ++L +R V ++ N Y P+ ++ D L + GVV + + Sbjct: 74 SQYAEHGDIVVASLNARQICRRLHMRGDVVILESQNPDYPPLHVTDNDDLIILGVVTYSL 133 Query: 136 KAM 138 K + Sbjct: 134 KNL 136 >UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0C8_9CLOT Length = 487 Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+ P++SD + G P +E + ++ + +K GDSMI I +GD Sbjct: 361 ELKKLPVYSD-IAAGEPILMNPEIEDVFYVPTYWLKGMKDCFILKVRGDSMIGADIDNGD 419 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFG 129 +I+ TA + DIV +DG T+K+ + + + L+P N Y PI I+ E + G Sbjct: 420 YVIIKKQYTAQNKDIVAVNLDGNATLKRFVNKKEGIYLMPENKKYEPIRINDEGA-RIIG 478 Query: 130 VVIHVVK 136 V + ++K Sbjct: 479 VAVGIIK 485 >UniRef50_D0S989 SOS-response transcriptional repressor n=2 Tax=Acinetobacter johnsonii SH046 RepID=D0S989_ACIJO Length = 204 Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 20/147 (13%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V+ P+ + + G D ++ +DLN+ LI +P +T+ +SM+D G D + Sbjct: 55 VSIPVSLERIPAGPAFSTKDEQDKALDLNEFLIHNPISTFIAYVDSESMLDAGFEINDPI 114 Query: 73 IVDSAITASHGDIVIAAVDG-EFTVKKLQLR-------------------PTVQLIPMNS 112 IVD +I A H DIVIA +D T+K+L + P + L N Sbjct: 115 IVDRSIEAKHYDIVIALIDNSSSTIKRLMITSKMSKSEIKEIFGDEDYPLPDLWLKAENP 174 Query: 113 AYSPITISSEDTLDVFGVVIHVVKAMR 139 Y+ I + T+ ++GVV +K + Sbjct: 175 RYNHIIPNDSQTISIWGVVTFNLKRIH 201 >UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_BRAHW Length = 208 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 10/131 (7%) Query: 12 IVTFPLFSDLVQCGFPSPAADY-VEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 ++ PL ++ V+ G AD VE+ L + + Q + + +K GDSMI+ I +GD Sbjct: 79 MIKIPLLANEVKAGLLMDVADETVEETYSLPKSIAQDEN-NFLMKVIGDSMINAHIKEGD 137 Query: 71 LLIVDSAITASHGDIVIAAVDG----EFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTL 125 +++V + A +GDIV+A +D E T+K+ + + V+L+ N+ Y PI +++ Sbjct: 138 MVLVHPSNEADNGDIVVAKIDDNGNEEITIKRFFREKDCVKLVSENNNYPPI---ERESI 194 Query: 126 DVFGVVIHVVK 136 + G VI +++ Sbjct: 195 SIVGKVIGLIR 205 >UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae RepID=D2TWH9_9ENTR Length = 213 Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 41/119 (34%), Positives = 62/119 (52%), Gaps = 7/119 (5%) Query: 22 VQCGFPSPAADYVEQ--RIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 V G P A +++E RID I PSA + ++ +G SM + GI DGDLL V Sbjct: 93 VAAGEPLLAQEHIESHYRIDAT---IFRPSADFLLRVNGMSMKNIGIIDGDLLAVHKTQQ 149 Query: 80 ASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITIS-SEDTLDVFGVVIHVVK 136 +G IV+A +D E TVK+ Q V+LI N + PI + L + G+ + +++ Sbjct: 150 VHNGQIVVARIDDEVTVKRFKQAGSKVELIAENPEFEPIIVDLRTQNLTIEGLAVGIIR 208 >UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepID=LEXA_GLUDA Length = 253 Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 4/121 (3%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 F + G P A +I++ L+ H Y ++ +GDSMI+ GI DGD +I+ Sbjct: 133 FYGRIAAGQPIEALRETGAQIEVPMNLLGH-GEHYALEVAGDSMIEAGILDGDTVIIRRG 191 Query: 78 ITASHGDIVIAAV-DGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A +G IV+A + D E T+K+L+ R T+ L P N+ Y P + S D + + G ++ ++ Sbjct: 192 DVAQNGQIVVALIDDQEVTLKRLRRRGSTIALEPANARYEPRIVPS-DRVRIQGQLVGLL 250 Query: 136 K 136 + Sbjct: 251 R 251 >UniRef50_B5IKI1 LexA repressor, putative n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IKI1_9CHRO Length = 132 Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 1/100 (1%) Query: 38 IDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVK 97 IDL +LL+ P ++ +G+SM D GI GDLLIVD + G +V+A ++ FTVK Sbjct: 31 IDLQRLLLPDPRGCLLLRVAGESMRDAGIHHGDLLIVDRRLEPRPGLVVVALLEEGFTVK 90 Query: 98 KLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +L R T + L + AY + + + + ++GV HV+ Sbjct: 91 RLAGRGTRLWLEAAHPAYPALPLPPDPAVQLWGVATHVIH 130 >UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 8797 RepID=A6CDG4_9PLAN Length = 202 Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 18/136 (13%) Query: 5 KPADLREIVTFPLFSDLVQCGFP--SPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 KPA++ FS +Q G P PAAD + ++D + L + +K G+SMI Sbjct: 78 KPANV-------TFSGSLQAGTPIIPPAAD--DSQVDFSALF--ESGDNFCLKVKGNSMI 126 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKL-QLRPTVQLIPMNSAYSPITIS 120 + I +GD ++V T G+IV+A VD E T+K+ Q V+L P NS SPI + Sbjct: 127 EAQIQEGDFVVVKKQDTCQQGEIVVALVDNQEATLKRFYQEADRVRLEPANSTMSPIYST 186 Query: 121 SEDTLDVFGVVIHVVK 136 + V GVV V++ Sbjct: 187 D---VQVLGVVKGVIR 199 >UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9FIRM Length = 205 Score = 58.2 bits (139), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + +E + + + T+F+K G+SMI+ GI DG Sbjct: 80 REMVHVPIIGQ-VAAGEPILAQENIEDYWPVPADRMPN-KQTFFLKVKGESMINAGILDG 137 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVF 128 D+++V+ TAS+GD+V+A ++ TVK V +L P N PI + + + + Sbjct: 138 DMVLVEEDSTASNGDMVVALIEDGATVKTFYKEEGVFRLQPENDFMDPIIVKN---VTIL 194 Query: 129 GVVIHVVK 136 G VI V++ Sbjct: 195 GKVIAVMR 202 >UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPQ3_9BACT Length = 201 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 2/114 (1%) Query: 24 CGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHG 83 G P A + +E + L++L I+ +F+K GDSM D I GD +++ ++G Sbjct: 78 AGVPVEAEENIEGYMKLDRLTIRS-GGHFFLKVDGDSMKDEAILHGDYVLIKPGPIITNG 136 Query: 84 DIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 I ++GE T+K Q + L+P N A+ PI + D +V G + V++ Sbjct: 137 QIGAFRINGEVTLKTFRQNAEGIYLMPANEAFEPIPVGEYDDFEVIGTLKMVLR 190 >UniRef50_D1R7F0 LexA repressor n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7F0_9CHLA Length = 206 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 6/138 (4%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L KP++L + F + GFP Q + + + L+Q P ++Y ++A G+S+ Sbjct: 69 LETKPSNLNQHELELPFIGHILAGFPVEIFPKT-QSLAVPKFLVQEPDSSYILRARGNSL 127 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPM---NSAYSPIT 118 D ISDGDLLIV++ A G+ ++A ++ T K + P Q + + +SA SPI Sbjct: 128 NDEMISDGDLLIVETGREACSGEWIVALLNEHETFIK-RYYPEGQYVRLAGHDSAQSPIM 186 Query: 119 ISSEDTLDVFGVVIHVVK 136 I +D L + G+V+ +V+ Sbjct: 187 IHLDD-LVIQGIVVGLVR 203 >UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=LEXA_DESAA Length = 203 Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 62/120 (51%), Gaps = 4/120 (3%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A + V +D+++ A + V+ GDSMI+ I DGD +++ T Sbjct: 85 IAAGAPILAVENVMDTLDVDRAFFGSSDA-FSVRVEGDSMIEAHIEDGDYVVIKPTATPR 143 Query: 82 HGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLD--VFGVVIHVVKAM 138 +GDIV A V+ E T+K + ++L P N Y P + ED +D V GV+ +++ + Sbjct: 144 NGDIVAALVNDEVTLKYFHRDGSRIELRPANVRYKPFCYTEEDFIDVRVLGVMAGLIRKV 203 >UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX5_9CLOT Length = 147 Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 7/131 (5%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMIDGGIS 67 R +T ++ + V G + D + +++++ L+ P T F VK SGDSM + Sbjct: 17 FRRAIT--VYENAVSAGTGNFLEDGPSRTLNIDEALL--PENTSFGVKISGDSM-EPEFH 71 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLD 126 DGD+ V T +G+I I +++G+ +KKL+ + + L+ +N Y+PI +S D D Sbjct: 72 DGDIAWVVKQETVENGEIGIFSLNGDAYIKKLREDKEGIFLVSLNKKYAPIRVSENDRFD 131 Query: 127 VFGVVIHVVKA 137 VFG V+ A Sbjct: 132 VFGKVVETGSA 142 >UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LEXA_ACTSZ Length = 210 Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%) Query: 15 FPLFSDLVQCGFPSPAADYVEQ--RIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 PL V G P A ++E R+D + P A + +K +G SM + GI DGDLL Sbjct: 83 LPLIGQ-VAAGEPILAEQHIEGTYRVDPDMF---KPQADFLLKVNGQSMKNIGILDGDLL 138 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITIS--SEDTLDVFG 129 V S +G +++A ++ E TVK+L+ + V L N ++PI ++ ++ ++ G Sbjct: 139 AVHSTKDVRNGQVIVARIEDEVTVKRLERKGDVIYLHAENEEFAPIVVNLREQERFEIEG 198 Query: 130 VVIHVVK 136 + + +++ Sbjct: 199 IAVGIIR 205 >UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF89_CLOTS Length = 268 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 8/130 (6%) Query: 13 VTF-PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 VT+ P++++ + G+P+ + D + + P A + V +GDSMI+ GI DGD+ Sbjct: 138 VTYVPVYANKIPAGYPNEVG--TDDICDWYVVPSEIP-ADFAVNVTGDSMINAGIDDGDI 194 Query: 72 LIVDSAITASHGDIVIA-AVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFG 129 + TA +GDI+IA + +GE T+K +Q L+P N Y PI +++ + G Sbjct: 195 VFATINTTADYGDIIIAVSENGEVTIKYFIQKDNQYFLMPANPDYKPIPFTND--FRIVG 252 Query: 130 VVIHVVKAMR 139 +V ++K R Sbjct: 253 IVTGILKEPR 262 >UniRef50_Q0I454 ImpA protein n=8 Tax=Pasteurellaceae RepID=Q0I454_HAES1 Length = 151 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 2/107 (1%) Query: 35 EQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEF 94 +++DLN I+HP T F++ + +++ I GD+LIV+ S D+V+ ++ +F Sbjct: 35 HKKLDLNLYCIKHPQQTCFIQVNNPNLLAWNIEQGDILIVEKQNYLSMNDLVVLDLNNQF 94 Query: 95 TVKKLQLRPTVQLI--PMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 + + + + I P+++ I S+ TL + G V + + ++ Sbjct: 95 QIYEFMMHENNEFIFFPLDNKVHSIRTSNWQTLPIIGTVTNTIHQIK 141 >UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C0CQZ2_9FIRM Length = 227 Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 7/110 (6%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + CG P ++++ D ++ + A + +KA GDSM++ I DGD++ + S Sbjct: 109 IACGKPI----FMDENRDNYTMIGSNVKADFCLKAKGDSMVNARIMDGDIVFIRSQPEVE 164 Query: 82 HGDIVIAAVDGEFTVKKL---QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 +G+I A+D E T+K+ ++ TV LI N Y+P+ + E +V+ Sbjct: 165 NGEIAAVAIDDEATLKRFYRDEITQTVTLISENPIYAPMVFTKECQKNVY 214 >UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I624_DESAP Length = 196 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 2/87 (2%) Query: 51 TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIP 109 T+ ++ G+SM D GI GD ++V TA +G +VIA V+GE T K+ + V L P Sbjct: 109 TFCLEVRGESMQDLGIDSGDYVLVRLQPTAENGQVVIARVEGEVTCKRYYRTDRVVSLEP 168 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 N + P+ + + + +++ GVV +V+K Sbjct: 169 ANRRFRPLRLEAGE-IEIVGVVTNVIK 194 >UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=Bacteria RepID=C3RNC9_9MOLU Length = 206 Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 7/115 (6%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVK-ASGDSMIDGGISDGDL 71 +T PL+SD + CG D V++ I L + L+ PS YF + A GDSMI+ I+ GDL Sbjct: 76 ITIPLYSD-ISCGTGLFVDDNVDEYISLPETLL-SPSKEYFCQYADGDSMINENINQGDL 133 Query: 72 LIVDSAITASHGDIVIAAVDGEF-TVKKLQLRPTVQLI---PMNSAYSPITISSE 122 ++ + + +G++ +D T KK I P N Y+PI I+ E Sbjct: 134 IVFEKSNQIRNGEVGCFTIDDNVATCKKFYRDDNNHCIILQPANPEYTPIVINQE 188 >UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID=D0YVD4_9ACTO Length = 278 Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 4/88 (4%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPM 110 + ++ +G+SM D I +GD ++V + A +GDIV A ++GE TVK+ + V L+P Sbjct: 194 FMLEVNGESMRDAAIMNGDWVVVRAQNEARNGDIVAAMLEGEATVKEFSRDKGHVWLLPH 253 Query: 111 NSAYSPITISSEDTLDVFGVVIHVVKAM 138 N ++ PI D + G V+ V++A+ Sbjct: 254 NPSFEPI---PGDGATILGKVVTVIRAL 278 >UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE14_EUBR3 Length = 244 Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 36/117 (30%), Positives = 66/117 (56%), Gaps = 3/117 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 +F + V G + D ++ + +++ ++ + T+ V+ SGDSM + DG + V Sbjct: 117 IFENAVSAGTGNFLVDGPKETVHIDESILPEDT-TFGVRISGDSM-EPEFHDGQIAWVLQ 174 Query: 77 AITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 + ++G+I I A++GE +KKLQ + + LI +N Y+PI + D LD+FG V+ Sbjct: 175 QESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVL 231 >UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN Length = 250 Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 4/86 (4%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPM 110 + +K G SMI+ I DGD ++V A +G+IV A +DGE TVK+ + R V L P Sbjct: 166 FLLKVVGQSMINAAICDGDFVVVRQQPVADNGEIVAAMIDGEATVKRFRQRDGRVWLAPE 225 Query: 111 NSAYSPITISSEDTLDVFGVVIHVVK 136 N A+S I +ED + G ++ V++ Sbjct: 226 NPAFS--DIPAEDAT-ILGRIVAVMR 248 >UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7_STRCL Length = 240 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + +P + PL ++ G P A +E L + L+ + +K +G+SMI Sbjct: 108 YEQPENQNAATEVPLVGR-IEAGAPVLAEQMIEDTYLLPRQLVGE-GELFALKVTGESMI 165 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNSAYSPITIS 120 + I DGD++ V A GDIV A +DGE TVK+ Q L+ N + P+ Sbjct: 166 EAAICDGDVVTVRRQQVAQPGDIVAAMLDGEATVKRFQRDAAGHAWLVAHNPRFQPL--- 222 Query: 121 SEDTLDVFGVVIHVVKAM 138 + D + G V+ V++A+ Sbjct: 223 AADHAVILGKVVAVIRAL 240 >UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_METEA Length = 258 Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 31/87 (35%), Positives = 54/87 (62%), Gaps = 3/87 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAV-DGEFTVKKLQLR-PTVQLIP 109 Y ++ GDSMI+ GI DGDL+++ TA++GDI++A + D E T+K+L+ R ++ L Sbjct: 171 YALEVRGDSMIEAGILDGDLVVIHKQETANNGDIIVALIDDEEATLKRLRRRGSSIALEA 230 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 N AY + D + + G ++ +V+ Sbjct: 231 ANPAYE-TRVLGPDRVRIQGKLVSLVR 256 >UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) RepID=B9KYW2_THERP Length = 214 Score = 54.7 bits (130), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 19/140 (13%) Query: 12 IVTFPLFSDLVQCGFPSP---------AADYVEQRIDLNQLLIQHPSATYF-VKASGDSM 61 +V PL + G P P AA+YVE L L+ HP+ F ++ G SM Sbjct: 80 VVRVPLVGTIA-AGQPLPVLEPIEVDGAAEYVE----LGSQLVGHPARDLFALRVKGQSM 134 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRPT-VQLIPMNSAYSPIT 118 ID I DGD++++ TA +GD V A + + E T+K+ V+L P N+ PI Sbjct: 135 IDALIDDGDIVVLRRQATAENGDTVAAWLRREQETTLKRFYREGNLVRLQPANATLQPI- 193 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 ++ D +++ G ++ V++ + Sbjct: 194 YTTIDNVEIQGKLLLVIRRL 213 >UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) RepID=LEXA_CORJK Length = 267 Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A VE L Q L+ + + ++ G+SM D GI +GD ++V S A Sbjct: 154 IAAGAPILAEQNVEAHFPLPQELVGN-GELFLLQVVGESMHDAGIFNGDWVVVRSQSVAE 212 Query: 82 HGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 GD V A +DGE TVK+ Q + LIP N + PI L V+ + Sbjct: 213 FGDFVAAMIDGEATVKEFQKDADGLWLIPHNPLFEPIPAEEATILGKVAAVLRKI 267 >UniRef50_A7I013 Putative uncharacterized protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I013_CAMHC Length = 233 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%) Query: 54 VKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSA 113 +K+ GDSM + I LL + G I +A +D E VK+LQ RP V+LI N Sbjct: 151 IKSKGDSM-EPTIPKNALLFIRLG-DVEEGQICVARIDDELYVKRLQKRPVVKLISDNPD 208 Query: 114 YSPITISSEDTLDVFGVVIHVVKAM 138 Y PIT+ ++ ++ G VI +K Sbjct: 209 YDPITLQPDENFEIIGCVIGYIKKF 233 >UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSV5_9BIFI Length = 263 Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 2/97 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A +VE + L + + + ++ GDSM+D I DGD ++V TA Sbjct: 150 IAAGTPITAEQHVEDVMRL-PVRLTGTGKLFMLEVHGDSMVDAAICDGDFVVVREQHTAD 208 Query: 82 HGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPI 117 +GDIV A + E TVK + + L+P N +YSPI Sbjct: 209 NGDIVAALLGDEATVKTFRNEDGHIWLMPHNPSYSPI 245 >UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJY0_ACIFE Length = 215 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + +V PL V G P A + +E + LI + + GDSM + GI D Sbjct: 88 KSMVPVPLVG-AVHAGDPMLAVENIEDTYPIPLDLIGCSEDVFMMVVEGDSMKNAGILDH 146 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A++GDIV+A +GE T K R ++L P N AY PI D +++ Sbjct: 147 DYVFVRKQNYATNGDIVVALFNGEETTIKRYFRELKQIRLQPENDAYPPIV--GTDNIEI 204 Query: 128 FGVVIHVVKAM 138 G VI V + + Sbjct: 205 KGKVIAVFRTL 215 >UniRef50_B3DST2 SOS-response transcriptional repressor n=6 Tax=Bifidobacterium longum RepID=B3DST2_BIFLD Length = 128 Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 1/95 (1%) Query: 45 IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT 104 + H + + ++ +GDSMI+ GI +GDLLIVD ++ GD+V A +D E +K+L R Sbjct: 10 MAHEATLFVMQMAGDSMINAGIHNGDLLIVDRSLAPVPGDVVAAVMDDEIAIKRLVSRAG 69 Query: 105 VQLI-PMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 + ++ N Y S+ + ++G+V V+ + Sbjct: 70 ITILHAENPRYPDYMPSNGASPAIWGIVTDVIHPL 104 >UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N447_9BACT Length = 209 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 16/105 (15%) Query: 22 VQCGFPSPAADYVEQRIDL-NQLLIQH-PSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 V G PS + ++ E + + N +L +H P + ++ G+SM D GI DGD++I + Sbjct: 89 VNAGLPSESIEFKEGEVCISNTMLGEHTPEQMFALRVQGESMRDLGIYDGDIVICGQGAS 148 Query: 80 ASH-GDIVIAAVDGEFTVK--------KLQLRP-----TVQLIPM 110 GDIV+A V GE TVK +++LRP +VQ+ P+ Sbjct: 149 KPRPGDIVVALVQGEVTVKSYFPKTGGRIELRPANPDFSVQVYPI 193 >UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9V1_9FIRM Length = 217 Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 5/120 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +++I+ P+ +QCG P + + E + +I ++ + + A GDSMID GI + Sbjct: 87 VKKIIKIPILGH-IQCGKPVMSVENYEGYFTADPEMI---NSDFCLYADGDSMIDAGIHE 142 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 GDL+ +G I +D T+K+ + + L P N +YSPI I+ +++ ++ Sbjct: 143 GDLVFFKQTPQVENGSIAAVFIDDTTTLKRFYKKENQIILQPENKSYSPIIINLDESTNI 202 >UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=Hydrogenothermaceae RepID=B2VA45_SULSY Length = 210 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 38/128 (29%), Positives = 69/128 (53%), Gaps = 7/128 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 FP + + G P + + IDL+ +L Y ++ G+SMI I + D++IV Sbjct: 76 FPYYG-TISAGKPIAIENQTFEYIDLSDIL--RCENCYALRVKGNSMIGEFILNDDIIIV 132 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 ++ A +G+IV+A +DG E T+KK ++L+P N Y P+ I D +++ GV+ Sbjct: 133 ENRKEALNGEIVVAVIDGEETTLKKFYNLGNGYIKLVPANPDYEPM-IYEADRVEIQGVL 191 Query: 132 IHVVKAMR 139 +V++ + Sbjct: 192 KGIVRSFK 199 >UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepID=LEXA_BRASO Length = 232 Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAV-DGEFTVKKLQLR-PTVQLIP 109 Y ++ GDSM+D GI DGD+ ++ TA GDIV+A + D E T+K+ + R ++ L P Sbjct: 145 YALEVRGDSMVDAGILDGDMALIQRNETADTGDIVVALIDDEEATLKRFRRRGASIALEP 204 Query: 110 MNSAYS 115 N+AY Sbjct: 205 ANTAYE 210 >UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS26_DESOH Length = 210 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIP 109 + ++ GDSM D I DGDL+I + A +G+IV+A V+G E TVK+ R ++L P Sbjct: 119 FALRVKGDSMKDAAILDGDLVICEPRQFAENGEIVVALVNGEEATVKRFFKRQDHIELKP 178 Query: 110 MNSAYSPITISSEDTLDVFGVVI 132 N AY+P+ + D L + G VI Sbjct: 179 ENPAYAPLKLMFGDVL-IQGKVI 200 >UniRef50_C0WR03 Bifunctional S24 family peptidase/transcriptional regulator n=2 Tax=Lactobacillus RepID=C0WR03_LACBU Length = 232 Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 2/88 (2%) Query: 46 QHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPT 104 Q P + +K +GDSM + D + +V A A +G IVIA VDG +K+ + T Sbjct: 141 QLPKFDFAIKINGDSM-EPRFHDQQVALVKKAFEAENGQIVIAYVDGRSYIKQFEHTEQT 199 Query: 105 VQLIPMNSAYSPITISSEDTLDVFGVVI 132 +LI +N Y+PI + + + G+VI Sbjct: 200 CRLISLNRKYAPIEVQDNPSFQIKGIVI 227 >UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3U3_GEMAT Length = 202 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 4/96 (4%) Query: 44 LIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP 103 ++ + Y ++ GDSMI+ I DGD ++++ A +G++VIA +DG K R Sbjct: 106 FLRRNGSHYVLRVRGDSMIEEHIRDGDFVVINDKQAADNGEMVIALLDGSGATVKRYYRE 165 Query: 104 ---TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 ++L P N P+ + ED + + G+V+ V++ Sbjct: 166 RDGRIRLQPANETMQPLFV-HEDDVRIQGIVVGVLR 200 >UniRef50_B9XRF1 SOS-response transcriptional repressor, LexA n=2 Tax=Verrucomicrobia RepID=B9XRF1_9BACT Length = 207 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 14/134 (10%) Query: 10 REIVTFPLFSDLVQCGFPSPAAD--YVEQR----IDLNQLLIQHPSATYFVKASGDSMID 63 + +V P+F + P+ A+ Y E R ID+ L I+ + T+ ++ GDSMI Sbjct: 77 KRVVDIPVFGSI-----PAGLAENRYEEARGCVSIDVGTLNIKPTTRTFALEVRGDSMIG 131 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSE 122 I GD++I++ + A GD+V A +D E T+K ++ R L N YS + + Sbjct: 132 KNICPGDIVILEHGVEAKVGDVVAALIDNESTLKTYVKERSKTYLRAENPKYSKLIPA-- 189 Query: 123 DTLDVFGVVIHVVK 136 D L + GV+I +++ Sbjct: 190 DELVIQGVMIALIR 203 >UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID=LEXA_CAUSK Length = 235 Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A + +R+ + + ++ Y ++ GDSMI+ GI DGD +I+ TA+ Sbjct: 119 IAAGTPIDAIQHERERLPVPESMLG-AGEHYVLEVQGDSMIEAGILDGDYVIIKKGDTAN 177 Query: 82 HGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 G+IV+A V E T+K+L+ + ++ L N Y I D ++V G ++ +++ Sbjct: 178 SGEIVVALVGEEATLKRLRKKGGSIALEAANPKYE-TRIFGPDQVEVQGKLVGLIR 232 >UniRef50_P97845 RvuZ homolog (Fragment) n=1 Tax=Rattus norvegicus RepID=P97845_RAT Length = 79 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Query: 51 TYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIP 109 TY V SGDSM GI DGD LIV A+ A GD+V+A ++G+ VK+L + + + L Sbjct: 6 TYVVLVSGDSMTGAGIFDGDYLIVSRALEAKSGDVVVACLNGDVFVKRLGRCQKSYVLQS 65 Query: 110 MNSAYSPITISSED 123 + Y+P + +D Sbjct: 66 EHPDYAPRYVLDDD 79 >UniRef50_C1D6P9 Transcriptional regulator n=2 Tax=Betaproteobacteria RepID=C1D6P9_LARHH Length = 242 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 9/139 (6%) Query: 5 KPADLREIVTFPLFS--DLVQCG-FP---SPAADYVEQRIDLNQLLIQHPSATYFVKASG 58 P DL E V P +S CG +P SP +R + L +P + G Sbjct: 99 NPVDLEEFVFIPRYSVRAAAGCGQWPEDESPRFSMAFRRYWVENYLRANPDELSVIAVDG 158 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNSAYSP 116 DSM +G ++D D+++V+ A G I + +DG VK++Q P +++ N AY P Sbjct: 159 DSM-EGVLNDRDVILVNHADRDPRGSIYVLRIDGHLVVKQVQRLPGGILEVSSSNPAYKP 217 Query: 117 ITISSEDTLDVFGVVIHVV 135 T+ D F V+ VV Sbjct: 218 FTVELGKVGDDFDVIGRVV 236 >UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPZ6_THISH Length = 197 Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%) Query: 35 EQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG-E 93 E +DL L+ Y ++ G+SM+ GI DGD ++V A +A GDIV+A +D E Sbjct: 93 EDTLDLADFLLG--PGRYALRVVGESMVGAGILDGDTVVVQQADSARDGDIVVALIDDEE 150 Query: 94 FTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 T+K+++ RP V+L N A +P+ + + + GVV+ ++ R Sbjct: 151 ATLKRIRHRPDGQVELRAENPAMAPLVYDAA-RVRIQGVVVGQLRGYR 197 >UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 RepID=C2KVZ7_9FIRM Length = 235 Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 3/113 (2%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++E+V+ P+ V G P A + V L ++ + T+ +K GDSMI+ GI D Sbjct: 109 MKEMVSVPVIG-TVAAGTPIFAEENVSDHFPLPTEILPN-QETFILKVKGDSMINVGIFD 166 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITIS 120 GD L+V T S G++V+A V+ TVK+ + + ++L P N I ++ Sbjct: 167 GDYLMVAKQNTCSDGEVVVALVEDSATVKRFYKEKGYIRLQPENDTMEDIIVN 219 >UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepID=LEXA_NOVAD Length = 234 Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIP 109 Y ++ SGDSM++ GI DGD +V A G+IV+A V G E T+K L + V+L P Sbjct: 146 YALEVSGDSMVEAGIFDGDYALVRKTDVARDGEIVVALVRGEEATLKYLHREKGMVRLDP 205 Query: 110 MNSAYSPITISSED 123 N+AY P E+ Sbjct: 206 ANAAYDPQYYRPEE 219 >UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD Length = 217 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 3/112 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 +++ PL V G P A VE+ + L ++ S+++ ++ G+SMI+ GI DGD Sbjct: 93 NVISLPLVG-RVAAGTPILAEQNVEESLSLPTSIVGD-SSSFILRVRGESMINAGIFDGD 150 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISS 121 ++V A G+IV+A +D TVK + ++L P N PI + + Sbjct: 151 YIVVKEQQDAHDGEIVVALIDDSATVKTFYRENDRIRLQPENDFMEPIYVKN 202 >UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEXA_HALHL Length = 226 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 3/118 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G P A + +E+ ++ L P A Y ++ G+SM D GI DGDLL V A Sbjct: 96 VAAGSPLLAEESIERYCQVDASLFS-PPADYLLRVRGESMRDAGILDGDLLAVRRDTEAR 154 Query: 82 HGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVF-GVVIHVVKA 137 G IV+ + E TVK L+ ++LIP + Y I ++++ V G+ + V+++ Sbjct: 155 DGQIVVVRLHDEVTVKFLERCNGVLRLIPAHPDYPVIEVAADGQDAVLEGIGVGVLRS 212 >UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH, RecA-mediated autopeptidase) n=3 Tax=Bacillales RepID=B7GH61_ANOFW Length = 195 Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPM 110 +F++A GDSMI+ I+DG LL++ +G+I +DGE +K++ + T+ L Sbjct: 106 FFLEARGDSMINAHITDGALLLIRRQNDVDNGEIAAVLIDGEAVLKRVYKTEDTIILQSE 165 Query: 111 NSAYSPITISSEDTLDV 127 N Y PI + D DV Sbjct: 166 NPMYKPIILKRNDMKDV 182 >UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D1VBC2_9ACTO Length = 278 Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + G P A VE + L + ++ + ++ G+SMI+ I DGDL+ V Sbjct: 158 LPLVGRIA-AGGPILAEQAVEDVLPLPREIVGE-GTLFLLRVVGESMINAAICDGDLVAV 215 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +G+IV A +DGE TVK+ + V L P N A+ I + D + G V+ Sbjct: 216 RQQPVAENGEIVAAMIDGEATVKRFRRHDDGHVWLQPENPAFHDI---AGDDATILGRVV 272 Query: 133 HVVK 136 V++ Sbjct: 273 AVMR 276 >UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWS0_9FIRM Length = 236 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%) Query: 49 SATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQL 107 SA + V+ GDSM + DG ++ + T G+I + +DG+ VKK Q +QL Sbjct: 152 SADFGVRVCGDSM-EPLYLDGQIIWIHKQETLEEGEIGVFFLDGDAYVKKYHQSDSGIQL 210 Query: 108 IPMNSAYSPITISSEDTLDVFGVVI 132 I +N Y+PI ++S TL FG V+ Sbjct: 211 ISLNKKYAPIQVTSGSTLKTFGKVV 235 >UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGU3_CLOCL Length = 648 Score = 50.1 bits (118), Expect = 2e-05, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 67/127 (52%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+ P+F++ + G P + L + +++ + +K SGDSMI+ +++ D Sbjct: 522 ELKRIPVFNN-IAAGSPILINEEESDGFFLPKAFLKNNKEFFMLKVSGDSMINANLNNED 580 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 +I++ + + I A+ E T+K+++++ +V LI N Y P+ + S+D + + G Sbjct: 581 YVIIERSAQVDNMQIAAVAIGEEATLKRIKIKGNSVTLISENQNYPPMMVHSKD-VRILG 639 Query: 130 VVIHVVK 136 + V+K Sbjct: 640 NAVGVIK 646 >UniRef50_UPI0001C171EB SOS-response transcriptional repressor, LexA n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C171EB Length = 232 Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 8/110 (7%) Query: 16 PLFSDLVQCGFPSPAADYVE-QRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P AD VE + +DL L I P +Y ++ +GDSMI+ I+DGD++ + Sbjct: 99 PILGTIAAGGLIEPFADAVECEYLDLANLPI--PPQSYALRVAGDSMIEDLIADGDVVFL 156 Query: 75 DSAITAS---HGDIVIAAVDGE-FTVKKLQLRP-TVQLIPMNSAYSPITI 119 + +G IV A V+G T+K+ L V L P NS Y PI + Sbjct: 157 RPVAEPNLMKNGTIVAARVEGYGTTLKRFYLEGDMVTLKPANSNYQPIQV 206 >UniRef50_UPI000196B9BA hypothetical protein CATMIT_01071 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B9BA Length = 212 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 33/74 (44%), Positives = 40/74 (54%), Gaps = 3/74 (4%) Query: 49 SATYFVK-ASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKKL-QLRPTV 105 SA YF + ASG+SM D GISDGDLLI + G I D T KK +L + Sbjct: 115 SAKYFAQYASGESMKDAGISDGDLLIFEKVNKVDDGVIGCFCTDTNTATCKKYKELNGII 174 Query: 106 QLIPMNSAYSPITI 119 L PMN+ Y PI + Sbjct: 175 MLQPMNADYDPIVV 188 >UniRef50_A3ZYP5 LexA repressor n=2 Tax=Planctomycetaceae RepID=A3ZYP5_9PLAN Length = 206 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%) Query: 32 DYVEQR--IDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAA 89 + +EQ+ ID + +H VK GDSMI+ I DGD ++V +AS G IV+A Sbjct: 100 EAIEQKELIDFRDMFARHDQFVLAVK--GDSMIEAHIEDGDYVVVRKQDSASLGQIVVAE 157 Query: 90 V-DGEFTVK-KLQLRPTVQLIPMNSAYSPITISS 121 DGE T+K + ++L P NS+ PI + + Sbjct: 158 TDDGEATLKYWFPEKNRIRLQPANSSMDPIYVKN 191 >UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepID=LEXA_BRUA1 Length = 240 Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLR-PTVQLIP 109 Y ++ GDSMID GI DGD +I+ TA+ G+IV+A VD E T+K+ + ++ L Sbjct: 153 YALEVKGDSMIDAGIFDGDTVIIKRGDTANPGEIVVALVDEEEATLKRFRREGASIALEA 212 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 N AY I D + V G ++ +++ Sbjct: 213 ANPAYE-TRIFGPDRVHVQGKLVGLIR 238 >UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae RepID=C1D938_LARHH Length = 262 Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 64/139 (46%), Gaps = 9/139 (6%) Query: 5 KPADLREIVTFPLFSDLVQCGF------PSPAADYVEQRIDLNQLLIQHPSATYFVKASG 58 P +L++ V P ++ G P +R ++ L P + G Sbjct: 119 NPVNLQDFVFIPRYNLKASAGHGLDANGEKPIFSMAFRRYWIDNFLRIDPHDLSVLSVKG 178 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSP 116 DSM +G ++D D+++++ A A + + +DG+ VK+LQ +P + +I N AY+P Sbjct: 179 DSM-EGVLNDRDVILINHADNAPKDGLYVLRIDGDLVVKRLQRKPGGKIGIISANEAYAP 237 Query: 117 ITISSEDTLDVFGVVIHVV 135 I D + F +V VV Sbjct: 238 YDIDLNDLPNDFAIVGRVV 256 >UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8K2_COPPD Length = 198 Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 34/117 (29%), Positives = 63/117 (53%), Gaps = 6/117 (5%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G + A + +E + + + +P+ + +K GDSM GI +GD++IV+S Sbjct: 83 VTAGLKTLAVEELEGYLSMEDIF-ANPN-QFGLKVKGDSMQGAGILEGDVVIVNSDAEWI 140 Query: 82 HGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +GDI++A +D TVK+++ L P N Y P+ ++ E + + G V+ V++ Sbjct: 141 NGDIIVAIIDEMATVKRVKQDKYGNWWLEPDNPKYEPLPLNEE--VQIVGKVVAVIR 195 >UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7RPS7_9RHOB Length = 239 Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 3/117 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 + G P A + + + ++ Y ++ GDSMID GI+DGD++++ A Sbjct: 122 IAAGVPIEAISTMTHSVAVPGSMVSGRGEHYALEVKGDSMIDAGINDGDVVVIRETSVAD 181 Query: 82 HGDIVIAAV-DGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +GDIV+A V D E T+K + ++ L N AY + + D + V G ++ +++ Sbjct: 182 NGDIVVALVEDHEATLKTFKRHGSSIALEAANPAYETRVLPA-DKVKVQGRLVGLIR 237 >UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens RepID=B1R9D2_CLOPE Length = 354 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/135 (31%), Positives = 67/135 (49%), Gaps = 10/135 (7%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSM 61 + K D + I + V G PS A + VE+ + L Q P+ YF + +GDSM Sbjct: 213 YKKNKDYKNITCINKYGS-VAAGIPSFACEDVEKLLYLPQKYFS-PAYDYFALTINGDSM 270 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP---TVQLIP--MNSAYSP 116 + DG+++IV A +GDI+IA + GE T K+ +LIP N Y P Sbjct: 271 -NKLYEDGEIIIVRKQNYARNGDIIIACILGEATCKEYYFNKDDDKNELIPHSTNPKYKP 329 Query: 117 ITISSEDTLDVFGVV 131 + S+++ + + G+V Sbjct: 330 QSYSNDEII-ILGIV 343 >UniRef50_Q72P22 Transcriptional repressor (LexA family) n=1 Tax=Leptospira interrogans serovar Copenhageni RepID=Q72P22_LEPIC Length = 209 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 48/140 (34%), Positives = 75/140 (53%), Gaps = 18/140 (12%) Query: 6 PADLREIVTFPLFSDLV--------QCGFPSPA---ADYVEQRIDLNQLLIQHPSATYF- 53 P D EIV+ P S++V QCG P+ D VE RI L++ ++ S+ F Sbjct: 67 PKDY-EIVSDPEESNIVYLNRYGEAQCG-PNGTILDGDPVE-RIPLSRKMLPFSSSDGFI 123 Query: 54 VKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNS 112 VKA G+SMI I DGDL+I A A+ +++ +G+ +K+L+ T + L+ +N Sbjct: 124 VKARGNSMI-PRIKDGDLVIAKKASDANDKALIVCVQNGKVLIKQLRKSETGILLLSLND 182 Query: 113 AYSPITIS-SEDTLDVFGVV 131 + PITI+ +D + G V Sbjct: 183 EFDPITINPDKDDFKIEGEV 202 >UniRef50_Q8VV87 LexA repressor-like protein n=1 Tax=Terrabacter sp. RepID=Q8VV87_9MICO Length = 252 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 34/50 (68%) Query: 26 FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 FP+PA DY + + L++ LI P +T+ ++ +GD++ GI DGD L+VD Sbjct: 178 FPNPAQDYFDGHLSLDRHLIPRPLSTFVLRVTGDALASMGIHDGDELLVD 227 >UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MB88_9FIRM Length = 209 Score = 48.9 bits (115), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 8/122 (6%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQ-HPSATYF-VKASGDSMIDGGISDGDLLIVDSAIT 79 V G P D VE+ ID ++ + T+F ++ G+SM + S+GD++IV Sbjct: 89 VAAGIP---IDAVEEIIDTEEITEDMAKTGTFFGLQIHGNSM-EPKFSEGDVVIVRQQDD 144 Query: 80 ASHGDIVIAAVDG-EFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKA 137 A DIVIA V+G E T KKL + + LI N AY P+ S+++ +D +I VVK Sbjct: 145 AETDDIVIAIVNGDEATCKKLKKYNDGIVLISTNPAYEPMYFSNKEIMDKPVKIIGVVKE 204 Query: 138 MR 139 +R Sbjct: 205 LR 206 >UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ Length = 203 Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 1/97 (1%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 V G P A + +E I + + + Y ++ GDSMI+ GI GD+ I++ A Sbjct: 89 VAAGLPIFADENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGDIAIIEKRDIAR 148 Query: 82 HGDIVIAAVDGEFTVK-KLQLRPTVQLIPMNSAYSPI 117 +G+IV+A ++ E T+K + + ++L N Y PI Sbjct: 149 NGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPI 185 >UniRef50_B0BTB1 SOS-response transcriptional repressors/RecA-mediated autopeptidase n=8 Tax=Pasteurellaceae RepID=B0BTB1_ACTPJ Length = 151 Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 7/110 (6%) Query: 37 RIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTV 96 ++DLN L I+ P+ T+F++ ++I GI DLLIV+ + D+++ +GE+ Sbjct: 29 KLDLNSLCIKRPTETFFIQVKNPNLIAWGIELDDLLIVEQSEQYLVNDLIVIEKNGEYKF 88 Query: 97 KKL--QLRPTVQ-----LIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 + ++ +V L ++ + I+ +++ GV+ +VV MR Sbjct: 89 YQFFNEIENSVGTREIILFSLDVREPNLRITDWQEIEIAGVITNVVHQMR 138 >UniRef50_Q3ZL55 Transcriptional regulator n=1 Tax=Escherichia blattae RepID=Q3ZL55_ESCBL Length = 246 Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 9/140 (6%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVE------QRIDLNQLLIQHPSATYFVKASGDSM 61 DL E V P ++ G+ S D +R + L P+ + GDSM Sbjct: 106 DLEEFVFVPRYNVCASAGYGSWNDDETPMFTVSFRRFWVTNHLKADPAQLSVISVYGDSM 165 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNSAYSPITI 119 +G ++D D+++++ A I + +DG+ VK++Q P +++ N AY P +I Sbjct: 166 -EGVLNDKDIILINHADKEPREGIYVLRIDGQLIVKRVQRLPGSLLRITSTNPAYEPFSI 224 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 + D F +V VV R Sbjct: 225 NLNDVPSDFDIVGKVVWYGR 244 >UniRef50_C4ZMS9 Putative uncharacterized protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZMS9_THASP Length = 77 Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 10/76 (13%) Query: 1 MLFIKPADLRE----------IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA 50 M+F+ P+ + E + P V GFPSPA DY ++R+D+ + L+++P + Sbjct: 1 MMFVSPSPINEEFLLAALDSPAIFIPTGPTPVSAGFPSPAEDYAQKRLDIKEYLVRNPIS 60 Query: 51 TYFVKASGDSMIDGGI 66 T+F G I G Sbjct: 61 TFFFTVKGAPRITRGF 76 >UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K8_DEIDV Length = 211 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 4/126 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 FPL ++ G P A VE I +I Y ++ GDSMI GI D++IV Sbjct: 80 FPLVGEIA-AGQPGHAEQNVEAYITRLDQVIDMKEGDYLLRVRGDSMIGVGIYPQDIVIV 138 Query: 75 DSAITASHGDIVIAAVDGE--FTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVV 131 T +GDI + + GE T+K+++ + + + L N Y P+T + D +V Sbjct: 139 RPNETVPNGDIAVVLLPGESTATLKRVEHQNSKITLHSANPDYPPMTFPARDVRIQGCLV 198 Query: 132 IHVVKA 137 H+ +A Sbjct: 199 AHIGQA 204 >UniRef50_Q6MBQ6 Putative SOS response regulator lexA n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MBQ6_PARUW Length = 203 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 5/104 (4%) Query: 36 QRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFT 95 Q I + + H + TY ++ G+S+ + I DGDLL+V++ G+I+I A++ T Sbjct: 99 QTIAVPSTFVHHLNNTYILRVQGNSLSEELIQDGDLLVVEARSIVQPGEIIIGAINHHNT 158 Query: 96 VKKLQLRPTVQLIPMNS---AYSPITISSEDTLDVFGVVIHVVK 136 V K + P Q I + S +S +T+ D L + GV+ ++++ Sbjct: 159 VVK-RYYPEGQYIRLESIHINHSSLTL-RHDHLAIQGVLTNLIR 200 >UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_ACIBL Length = 210 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIP 109 + ++ SG+SM D I DGD ++V+ TA G+IV+A V+ T K R TV+L P Sbjct: 123 FVLQVSGESMQDEHIVDGDYVLVERINTARDGEIVVALVENSDTTLKRIYREGETVRLQP 182 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 N+ PI + + ++ V G VI V++ Sbjct: 183 SNAKMQPIRVPA-GSVQVQGRVIGVLR 208 >UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA_THELT Length = 200 Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/87 (31%), Positives = 50/87 (57%), Gaps = 3/87 (3%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLRP-TVQLIP 109 + ++ G+SMI+ I D D +++ TA++GDIV + E T+KK+ + P + L P Sbjct: 112 FLLRVRGESMIEEHILDKDYVVIRKQNTANNGDIVAVLTNSNEATLKKIYIEPEKIILKP 171 Query: 110 MNSAYSPITISSEDTLDVFGVVIHVVK 136 NS PI + E+ + + G ++ V++ Sbjct: 172 ANSKMQPIELKPEN-VKILGKMVGVIR 197 >UniRef50_Q2BYQ0 UmuD protein n=2 Tax=Photobacterium RepID=Q2BYQ0_9GAMM Length = 242 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 57/102 (55%), Gaps = 2/102 (1%) Query: 38 IDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVK 97 +DL+QL+I +T +A+G SM+ I D D+L+++ + + D+++ +++ + VK Sbjct: 139 LDLHQLVITQEHSTILCRAAGLSMLPY-IWDHDILVLERHLNPENEDVIVLSLNNDLVVK 197 Query: 98 KLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 ++ L L N ++ P I+ +D + GVV + ++ R Sbjct: 198 RVNLHSRT-LYSDNPSFQPHQINPDDYTRLHGVVRYSLRLHR 238 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 1/89 (1%) Query: 49 SATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQL 107 + + VK GDSM D GI +G +IV S DI + ++ + T+K+ LR V L Sbjct: 190 NKCFAVKVKGDSMKDSGILNGGYVIVRSQNMVDDDDIALMMIENQATIKRFHLRGNDVVL 249 Query: 108 IPMNSAYSPITISSEDTLDVFGVVIHVVK 136 I N + P+ + V G V++ ++ Sbjct: 250 ISDNDDFEPMVFHRSKEMQVVGKVVYYIR 278 >UniRef50_A8RF32 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RF32_9FIRM Length = 194 Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 6/88 (6%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKK-LQLRPTVQLIP 109 Y++K GDSM I DGDL+ V + +GDI + +D E T+KK L+ + L+ Sbjct: 102 YYLKVQGDSMNGSRIHDGDLVYVKTCSDVENGDIAVVIIDQSEVTIKKILKQEHALVLMA 161 Query: 110 MNSAYSPITISSED----TLDVFGVVIH 133 N AY P D + + G V+H Sbjct: 162 TNPAYEPRFFDENDIRNKRVQIIGKVLH 189 >UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYT5_9BACL Length = 210 Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 6/109 (5%) Query: 33 YVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVD- 91 Y+E+ D + + Q A + ++ GDSMI+ GI DGDL+ + + +G I + Sbjct: 105 YIEEEYDEHIFIDQGMRADFALRVKGDSMIEAGIFDGDLVFIRQQSSVRNGKIAAVRLTD 164 Query: 92 -GEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 E ++KK+ ++ V L P N Y PI + +++ G + V + + Sbjct: 165 WNEASLKKIFVKNDNVILYPCNPDYEPIVTRN---VEIIGECVGVYREL 210 >UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX34_PAESJ Length = 215 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 4/130 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D E VT P+ + CG A +Y+E + I + ++++A GDSM I Sbjct: 85 DESENVTLPVVGK-ISCGNGQIAYEYIEGYESTPRSWI-NGGEYFYLRAKGDSMQGARIF 142 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSP--ITISSEDTL 125 DGDLL++ G+I + E +K++ + T ++ +A P I + E+ + Sbjct: 143 DGDLLLIRKQEEVEDGEIAAVLIGEEAVLKRVYRQGTTLVLQSENANYPPIICTAGENNI 202 Query: 126 DVFGVVIHVV 135 V G + VV Sbjct: 203 YVIGKLKKVV 212 >UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERI3_9BACT Length = 222 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPM 110 + ++ GDSM GI DGD+ + A +GD+++A + GE T+K+L + + + L Sbjct: 125 FVLQIRGDSMNGAGILDGDMAFIRKTREARNGDLIVAHIQGEMTLKQLIVEKRQIILRAA 184 Query: 111 NSAYSPITISSED 123 N Y+ I +S +D Sbjct: 185 NPLYADIRVSPDD 197 >UniRef50_UPI0001C34D6D SOS-response transcriptional repressors n=1 Tax=Clostridium sp. M62/1 RepID=UPI0001C34D6D Length = 204 Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 5/92 (5%) Query: 52 YFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAA-VDGEFTVKKL----QLRPTVQ 106 Y ++A GDSM+D GI D DL+++ TA+ GDIV+A D E T+K + V Sbjct: 113 YILRAKGDSMVDAGIEDEDLIVIRIQDTAAVGDIVVALDEDNENTLKTFGGIDEENGDVI 172 Query: 107 LIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 L N P L V GV HV+KA+ Sbjct: 173 LRYANQTKYPDKEIRVKQLIVQGVAKHVIKAL 204 >UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA_THEM4 Length = 199 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%) Query: 50 ATYF-VKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQL 107 YF +K G+SMID I +GD +I+ +G I D + T+K+ + V+L Sbjct: 109 GNYFALKVEGNSMIDAHIINGDYVILKKQYRIPNGQIAAVVFDNKVTLKRFYHKKDKVEL 168 Query: 108 IPMNSAYSPITISSEDTLDVFGVVIHVVK 136 +P N +PI ++D + V G ++ +++ Sbjct: 169 VPENKDMNPIVCDAKD-IKVIGKLVGIIR 196 >UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5FPB3_DEHSB Length = 214 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 13/123 (10%) Query: 26 FPSPAADYV-----EQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA 80 P P +D ++ I++ + L + Y ++ G SMI+ I+DGDL+I+ T Sbjct: 94 IPVPESDSFAVVTSDESIEVTEDLTRGRENIYALRVKGVSMIEDLINDGDLVIMQHTQTV 153 Query: 81 SHGDIVIAAV----DGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 +G+ AAV E T+K++ + P V+L P N PI + D +++ G VI V+ Sbjct: 154 DNGE--TAAVWLKDQKEVTLKRIYMEPGRVRLQPANRTMPPI-YTKPDNVEIQGRVIAVI 210 Query: 136 KAM 138 + + Sbjct: 211 RQL 213 >UniRef50_C7H8I0 SOS-response transcriptional repressor n=4 Tax=Ruminococcaceae RepID=C7H8I0_9FIRM Length = 209 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 6/95 (6%) Query: 45 IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD--IVIAAVDGEFTVKK-LQL 101 ++ PS+ +++ GDSM + I DGDL +V T +GD ++I +GE T+K+ LQ Sbjct: 112 VKDPSSYFYLVVRGDSM-EPRIHDGDLALVHRQDTLENGDLGVLIYGDEGEGTLKRYLQR 170 Query: 102 RPTVQLIPMNSAYSPITISSED--TLDVFGVVIHV 134 V L P N AY + I E+ L + G V+ Sbjct: 171 GNCVVLQPFNPAYKEMVIKGEELNHLHIAGRVVET 205 >UniRef50_C6M778 HTH-type transcriptional regulator DicA n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M778_NEISI Length = 218 Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 9/96 (9%) Query: 45 IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT 104 I P+ + +K SGDSM + +GDL++VD G+ V+A +D + +K Q+ + Sbjct: 117 IHDPNKCFALKISGDSM-NPDFVEGDLIVVDIEQKPEPGEFVVARIDKDVVFRKYQVVSS 175 Query: 105 VQ-------LIPMNSAYSPITISSEDTLDVFGVVIH 133 V L P+N + P + SS T+++ G ++ Sbjct: 176 VNGEPECFSLSPLNRDFPPFS-SSRHTIEIIGTMVE 210 >UniRef50_C3XGR1 Putative uncharacterized protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGR1_9HELI Length = 243 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 17/117 (14%) Query: 32 DYVEQRIDLNQLLIQHPSATYF----------VKASGDSMIDGGISDGDLLIVDSAITAS 81 +++ Q I+L++ ++ +YF + A GDSM+ + + +IV T Sbjct: 133 EHITQHIELDKGFLR----SYFGLTSFLDLSIITARGDSMLPA-VPENCQIIVQKG-TPR 186 Query: 82 HGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G I + +D E VK+LQ RP +LI N +Y I + E+ ++ G+V+ + + + Sbjct: 187 EGQICVTRIDDELYVKRLQKRPKYKLISDNKSYDDIELEGEN-YEILGIVVGLFQKI 242 >UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM Length = 206 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 58 GDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKL-QLRPTVQLIPMNSAYS 115 GDSM + S+GD++IV A GDIVIA ++G + T K+L + R ++L+ N +Y Sbjct: 121 GDSM-EPKFSEGDVVIVRQQDDAESGDIVIAMINGDDATCKRLRKYRDGIELVSTNPSYE 179 Query: 116 PITISSED 123 P+ S+ED Sbjct: 180 PMFFSNED 187 >UniRef50_D2R3E9 SOS-response transcriptional repressor, LexA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3E9_9PLAN Length = 211 Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%) Query: 36 QRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIA-AVDGEF 94 +RID ++ + + ++ GDSMI+ ISDGD ++V +A+ G +V+A + +GE Sbjct: 110 ERIDFAEMFSK--KNLFVLQVRGDSMIEAHISDGDYVVVKKQKSANAGQMVVAQSPEGEA 167 Query: 95 TVK-KLQLRPTVQLIPMNSAYSPITISSED 123 T+K V+L P NS PI + + Sbjct: 168 TLKYWFPEAKGVRLQPANSTMQPIYLKEAN 197 >UniRef50_C8Q8N5 Putative uncharacterized protein n=1 Tax=Pantoea sp. At-9b RepID=C8Q8N5_9ENTR Length = 107 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 11/62 (17%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPA DY++ R+D N+L++ P+AT V + DG +VD +I GD Sbjct: 2 GFPSPAKDYLDNRLDWNELMVPRPAATMVVPTA-----DG------FALVDKSIRPKEGD 50 Query: 85 IV 86 V Sbjct: 51 TV 52 >UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7V8_9LACO Length = 222 Score = 45.4 bits (106), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%) Query: 45 IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIA-AVDGEFTVKK-LQLR 102 IQ + Y + G SMI GI +GD +IV TA +GDIVIA D E T K+ + + Sbjct: 128 IQDHNDLYMLTIRGTSMIKAGILNGDQVIVRKQSTAKNGDIVIAMNEDNEATCKRFFKEK 187 Query: 103 PTVQLIPMNSAYSPITISS 121 +L P N PI + + Sbjct: 188 DRFRLQPENDTMDPIYLKN 206 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=... 209 3e-53 UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Ta... 190 1e-47 UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX 187 1e-46 UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM 183 2e-45 UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S2... 181 9e-45 UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria Re... 180 1e-44 UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA... 179 2e-44 UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleoba... 179 3e-44 UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A... 178 4e-44 UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Des... 178 5e-44 UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S2... 177 7e-44 UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=B... 177 9e-44 UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methy... 176 2e-43 UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta ... 176 2e-43 UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 ... 175 5e-43 UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZE... 175 5e-43 UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S2... 174 7e-43 UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group Re... 174 8e-43 UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synech... 173 2e-42 UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=... 172 3e-42 UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1... 172 4e-42 UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legione... 171 6e-42 UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=... 171 6e-42 UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enter... 171 7e-42 UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S2... 170 1e-41 UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kan... 170 1e-41 UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S2... 170 2e-41 UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S2... 170 2e-41 UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ 169 2e-41 UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 ... 169 2e-41 UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas ... 169 3e-41 UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S2... 168 4e-41 UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n... 168 5e-41 UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=... 167 8e-41 UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=... 167 1e-40 UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID... 166 2e-40 UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2... 166 2e-40 UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1... 166 2e-40 UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX 165 3e-40 UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Met... 165 4e-40 UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Met... 165 4e-40 UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synech... 164 5e-40 UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Ser... 164 6e-40 UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Des... 164 7e-40 UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepI... 164 1e-39 UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 162 2e-39 UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nit... 162 2e-39 UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria ... 161 6e-39 UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular orga... 161 6e-39 UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7J... 161 9e-39 UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonen... 160 1e-38 UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=... 160 1e-38 UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Le... 160 1e-38 UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sid... 160 1e-38 UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=A... 160 2e-38 UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S2... 159 2e-38 UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cel... 159 2e-38 UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=u... 158 4e-38 UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Met... 158 5e-38 UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD... 157 8e-38 UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gal... 157 1e-37 UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Des... 157 1e-37 UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-me... 156 2e-37 UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Ps... 153 2e-36 UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Bei... 153 2e-36 UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus ... 152 2e-36 UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=... 150 1e-35 UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=... 149 2e-35 UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterob... 149 3e-35 UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax... 148 5e-35 UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus acid... 146 2e-34 UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. P... 146 3e-34 UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA... 145 4e-34 UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria ... 145 5e-34 UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 145 5e-34 UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes ... 144 6e-34 UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=... 144 7e-34 UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE 144 1e-33 UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Met... 143 1e-33 UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus D... 143 2e-33 UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Al... 143 2e-33 UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducen... 142 2e-33 UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum... 142 2e-33 UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 1385... 142 3e-33 UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S2... 141 6e-33 UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovoru... 141 9e-33 UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR 141 9e-33 UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=... 140 1e-32 UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 70012... 140 1e-32 UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thi... 139 2e-32 UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP 139 3e-32 UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEX... 138 5e-32 UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Ch... 138 5e-32 UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_A... 138 6e-32 UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivora... 138 6e-32 UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_... 138 6e-32 UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein ... 138 6e-32 UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12... 137 7e-32 UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium ... 137 7e-32 UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modestical... 137 1e-31 UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 R... 137 1e-31 UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_... 137 1e-31 UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD 136 2e-31 UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazo... 136 2e-31 UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophic... 136 2e-31 UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 ... 136 3e-31 UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus... 136 3e-31 UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEX... 135 4e-31 UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I... 135 4e-31 UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID... 135 4e-31 UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum R... 135 5e-31 UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor... 135 5e-31 UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR... 135 5e-31 UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydan... 134 6e-31 UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7... 134 6e-31 UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=... 134 9e-31 UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 ... 134 1e-30 UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Ch... 134 1e-30 UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0S... 134 1e-30 UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232... 134 1e-30 UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S2... 133 2e-30 UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D... 133 2e-30 UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 Re... 132 2e-30 UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkeniv... 132 3e-30 UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA... 132 4e-30 UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID... 132 4e-30 UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophil... 132 5e-30 UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteri... 132 5e-30 UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxid... 131 6e-30 UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni ... 131 9e-30 UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9... 131 1e-29 UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LE... 131 1e-29 UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID... 130 1e-29 UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LE... 130 1e-29 UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=A... 130 1e-29 UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae Rep... 130 1e-29 UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM 130 1e-29 UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans ... 130 1e-29 UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter viola... 129 4e-29 UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID... 128 6e-29 UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 128 6e-29 UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum ... 128 6e-29 UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans... 128 6e-29 UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN 127 1e-28 UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellat... 127 1e-28 UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) R... 127 1e-28 UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T... 127 1e-28 UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=S... 126 2e-28 UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LE... 126 2e-28 UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S2... 126 2e-28 UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEX... 126 3e-28 UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8... 126 3e-28 UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID... 125 3e-28 UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=H... 125 4e-28 UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET... 125 5e-28 UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n... 124 8e-28 UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus D... 124 1e-27 UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohaloba... 124 1e-27 UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_... 122 5e-27 UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-E... 121 7e-27 UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepI... 120 1e-26 UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB1... 120 1e-26 UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein ... 120 1e-26 UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteol... 120 1e-26 UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ 120 2e-26 UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus... 119 2e-26 UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_... 119 2e-26 UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N44... 118 5e-26 UniRef50_A9L6E3 Peptidase S24 and S26 domain protein n=39 Tax=Ga... 118 5e-26 UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 1... 118 5e-26 UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEX... 118 6e-26 UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepI... 118 6e-26 UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clo... 118 6e-26 UniRef50_UPI0000382BE7 COG1974: SOS-response transcriptional rep... 118 7e-26 UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA... 118 7e-26 UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) Re... 117 1e-25 UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_... 117 1e-25 UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 87... 117 1e-25 UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepI... 117 1e-25 UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Pa... 117 2e-25 UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM 116 2e-25 UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed t... 115 3e-25 UniRef50_Q8P6K4 Polymerase V subunit n=2 Tax=Xanthomonas RepID=Q... 115 4e-25 UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTC... 115 4e-25 UniRef50_D0S989 SOS-response transcriptional repressor n=2 Tax=A... 114 7e-25 UniRef50_Q03WX0 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_LEUMM 114 7e-25 UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostri... 114 1e-24 UniRef50_A9BGA3 LexA repressor n=1 Tax=Petrotoga mobilis SJ95 Re... 113 2e-24 UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF13... 112 2e-24 UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Th... 112 3e-24 UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepI... 112 3e-24 UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE1... 112 3e-24 UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=B... 112 4e-24 UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaeroc... 110 1e-23 UniRef50_UPI00016C36BD LexA repressor n=2 Tax=Gemmata obscuriglo... 110 1e-23 UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7... 110 1e-23 UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5F... 110 1e-23 UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens R... 110 2e-23 UniRef50_B4TAQ3 DNA polymerase V subunit n=11 Tax=root RepID=B4T... 110 2e-23 UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicu... 109 3e-23 UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus dese... 108 7e-23 UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA... 107 9e-23 UniRef50_Q2Y5T8 Putative prophage repressor n=1 Tax=Nitrosospira... 107 1e-22 UniRef50_Q4ZV62 Peptidase S24, S26A and S26B n=6 Tax=Pseudomonas... 107 1e-22 UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH... 106 2e-22 UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans ... 106 2e-22 UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 106 2e-22 UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM 106 3e-22 UniRef50_B9XRF1 SOS-response transcriptional repressor, LexA n=2... 105 3e-22 UniRef50_D1R7F0 LexA repressor n=1 Tax=Parachlamydia acanthamoeb... 105 5e-22 UniRef50_B2UKF5 Peptidase S24 and S26 domain protein n=2 Tax=Ral... 104 7e-22 UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein ... 104 1e-21 UniRef50_A3ZYP5 LexA repressor n=2 Tax=Planctomycetaceae RepID=A... 104 1e-21 UniRef50_A3XM66 SOS-response transcriptional repressors (RecA-me... 103 2e-21 UniRef50_C3AV55 Transcriptional regulator, XRE n=2 Tax=Bacillus ... 103 2e-21 UniRef50_C4ZFJ7 Putative prophage repressor n=2 Tax=Eubacterium ... 103 2e-21 UniRef50_UPI0001C171EB SOS-response transcriptional repressor, L... 102 3e-21 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 102 3e-21 UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus D... 102 4e-21 UniRef50_D2R3E9 SOS-response transcriptional repressor, LexA n=1... 102 5e-21 UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminoc... 101 6e-21 UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaeros... 101 8e-21 UniRef50_B3DST2 SOS-response transcriptional repressor n=6 Tax=B... 100 1e-20 UniRef50_UPI0001BC9EB9 ultraviolet light resistance protein A n=... 100 1e-20 UniRef50_C6SPU6 Putative transcriptional regulator n=2 Tax=Strep... 100 2e-20 UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostri... 100 2e-20 UniRef50_C0WR03 Bifunctional S24 family peptidase/transcriptiona... 100 3e-20 UniRef50_A0L3I3 Putative prophage repressor n=1 Tax=Shewanella s... 99 4e-20 UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sorda... 99 6e-20 UniRef50_B7AU39 Putative uncharacterized protein n=5 Tax=Bacteri... 98 7e-20 UniRef50_A3SCV4 UmuD protein n=1 Tax=Sulfitobacter sp. EE-36 Rep... 98 7e-20 Sequences not found previously or not previously below threshold: UniRef50_Q03B55 LexA repressor n=14 Tax=Lactobacillus RepID=LEXA... 118 7e-26 UniRef50_A4J3R4 Putative prophage repressor n=1 Tax=Desulfotomac... 109 2e-23 UniRef50_A5D283 SOS-response transcriptional repressors n=1 Tax=... 108 6e-23 UniRef50_Q9G0C2 ORF 221 n=1 Tax=Lactobacillus phage mv4 RepID=Q9... 105 3e-22 UniRef50_C8W2C3 Peptidase S24 and S26 domain protein n=1 Tax=Des... 104 9e-22 UniRef50_A5UQF5 LexA repressor n=7 Tax=Bacteria RepID=LEXA_ROSS1 104 1e-21 UniRef50_B3XLT2 Transcriptional regulator, XRE family n=9 Tax=La... 102 5e-21 UniRef50_C0WXK0 Possible repressor lexA n=3 Tax=Lactobacillus Re... 101 8e-21 UniRef50_C4VM34 SOS-response transcriptional repressor n=3 Tax=L... 100 1e-20 UniRef50_UPI0001744342 SOS-response transcriptional repressor, L... 100 2e-20 UniRef50_B8R672 Ci-like repressor n=1 Tax=Lactobacillus phage Lv... 100 2e-20 UniRef50_C4Z801 SOS-response transcriptional repressor, LexA n=1... 99 4e-20 UniRef50_D0DME8 LexA repressor n=1 Tax=Lactobacillus jensenii SJ... 99 4e-20 UniRef50_B1ZZZ4 Transcriptional repressor, LexA family n=1 Tax=O... 99 4e-20 UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein ... 99 4e-20 UniRef50_Q7U5V9 LexA repressor n=45 Tax=Cyanobacteria RepID=Q7U5... 99 4e-20 UniRef50_B1ZQH3 LexA repressor n=1 Tax=Opitutus terrae PB90-1 Re... 99 5e-20 UniRef50_B8I150 Transcriptional regulator, XRE family n=1 Tax=Cl... 99 5e-20 UniRef50_Q5WE12 SOS-response transcriptional repressor n=1 Tax=B... 99 6e-20 >UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=UMUD_ECO57 Length = 139 Score = 209 bits (532), Expect = 3e-53, Method: Composition-based stats. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS Sbjct: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS Sbjct: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 SEDTLDVFGVVIHVVKAMR Sbjct: 121 SEDTLDVFGVVIHVVKAMR 139 >UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Tax=Bacteria RepID=D0KZ55_HALNC Length = 243 Score = 190 bits (483), Expect = 1e-47, Method: Composition-based stats. Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 1/139 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ ++PA + ++T PLF + GFPSPA DYVE+RIDLN+ LI+H AT+F++ GDS Sbjct: 104 LIPLQPATVAPVLTLPLFGYRIAAGFPSPADDYVEERIDLNRHLIRHKEATFFLRVQGDS 163 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITI 119 MI+ GI DGD+LIVD AI G IVIAA+DGE TVK+L V+L+P N Y I I Sbjct: 164 MINAGIHDGDMLIVDRAIEPVSGKIVIAALDGELTVKRLSASGGVVRLLPENPDYPVIEI 223 Query: 120 SSEDTLDVFGVVIHVVKAM 138 +E L V+GVVIHV+ A+ Sbjct: 224 GAEQELVVWGVVIHVIHAL 242 >UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX Length = 149 Score = 187 bits (475), Expect = 1e-46, Method: Composition-based stats. Identities = 74/127 (58%), Positives = 93/127 (73%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PLF + V GFPSPA DYVEQ +DLN+L I+ P+AT+FV+ GDSMID GI D+L Sbjct: 20 LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL 79 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +VD ++ A HGDIVIA + GE TVK+LQLRP V+LIP N AY PI I L++FGVV Sbjct: 80 VVDRSVQAEHGDIVIAGIHGELTVKELQLRPCVKLIPRNQAYEPIHIPEGAELEIFGVVT 139 Query: 133 HVVKAMR 139 +VV+ MR Sbjct: 140 NVVRNMR 146 >UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM Length = 238 Score = 183 bits (465), Expect = 2e-45, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 2/136 (1%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 +PA+ T PL V GFPSPA D+VE ++DLNQ L++HP+AT+FV+ +G+SMI+ Sbjct: 102 FRPAEQARF-TIPLAGSRVAAGFPSPADDFVEAQLDLNQHLVKHPAATFFVRVAGESMIE 160 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSE 122 GI GD+L+VD ++ G IVIA +DGE TVK+L+ R + L+P N ++PI + +E Sbjct: 161 AGIHPGDILVVDRSLQPESGQIVIAVLDGELTVKRLEKRAGKLFLMPANRNFTPIEVGAE 220 Query: 123 DTLDVFGVVIHVVKAM 138 L ++GVV V Sbjct: 221 ADLLIWGVVTSTVHQF 236 >UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Bacteria RepID=Q31HB9_THICR Length = 206 Score = 181 bits (459), Expect = 9e-45, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 1/138 (0%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L I+ + E V PL S V GFPSPA DYVE R+DLN LIQ+ AT+ + GDSM Sbjct: 69 LQIQLPEFNEEVLLPLHSHKVVAGFPSPADDYVETRLDLNDKLIQNKQATFLLTVQGDSM 128 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITIS 120 GI DGD+L+VD ++T G IVIAA+DGE TVK L ++ L+P N Y PI + Sbjct: 129 KKAGIQDGDILVVDRSLTPQDGKIVIAALDGELTVKTLSIKSTGTWLVPENDNYPPIPVR 188 Query: 121 SEDTLDVFGVVIHVVKAM 138 E + ++GVV +K Sbjct: 189 EESDIVIWGVVTATIKQF 206 >UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria RepID=Q1NXL8_9DELT Length = 145 Score = 180 bits (457), Expect = 1e-44, Method: Composition-based stats. Identities = 61/137 (44%), Positives = 91/137 (66%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F + +DL+ PLFS V GFPSPA DYVE ++DLNQL++ HP+AT+FV+ +GDSMI Sbjct: 13 FDRQSDLKR----PLFSCGVSAGFPSPAEDYVEGQLDLNQLMVAHPAATFFVRVAGDSMI 68 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISS 121 GI D+L+VD ++ + G +VIA ++GE TVK+ + T +L+ N Y PI ++ Sbjct: 69 GAGIHHDDILVVDRSLEPTSGRVVIAVINGELTVKRLFRHNGTARLLAENPNYPPIELTE 128 Query: 122 EDTLDVFGVVIHVVKAM 138 E +V+GVV V+ ++ Sbjct: 129 EAACEVWGVVTFVIHSL 145 >UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA) n=5 Tax=Legionellaceae RepID=Q5ZUT8_LEGPH Length = 184 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 62/129 (48%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +E PL++ V+ GFPSP DY+E +DLN+ LI+HP++T+FV+ASG+SMI+ GI Sbjct: 53 EKEFPAIPLYTSSVRAGFPSPGDDYIESMLDLNEYLIKHPASTFFVRASGESMINAGIYS 112 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 GD+LIVD I A+HG IVI A++GE TVK+L + V+L+ N + PI I+ E + + Sbjct: 113 GDILIVDRGIEATHGKIVIVALNGELTVKRLSRQHGQVKLLAENPDFPPIDITEEYDMVI 172 Query: 128 FGVVIHVVK 136 +GVV HV+ Sbjct: 173 WGVVTHVIH 181 >UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SWQ8_POLSQ Length = 163 Score = 179 bits (454), Expect = 3e-44, Method: Composition-based stats. Identities = 57/123 (46%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L S + GFPSPAADY E +DLN L+Q+ AT+ GDSM+ GI DGD ++VD Sbjct: 32 LLSHRISAGFPSPAADYAEDGLDLNHYLVQNKPATFMFTVKGDSMLGAGICDGDKVVVDK 91 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ H DIV+A VD E+T+K+L QLR ++L P N + PIT + L ++GVV+ VV Sbjct: 92 ALKPKHKDIVVAVVDSEYTIKRLYQLRGRIELQPENPHFEPITFNEGSELQIWGVVVGVV 151 Query: 136 KAM 138 + Sbjct: 152 RKY 154 >UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A0KH65_AERHH Length = 147 Score = 178 bits (453), Expect = 4e-44, Method: Composition-based stats. Identities = 66/139 (47%), Positives = 94/139 (67%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M + VT PLF CGFPSPA+DY+E ++DLN + HP+AT++++A G+S Sbjct: 1 MTLLTQDPSPAEVTIPLFLHRASCGFPSPASDYLEGKLDLNTHCVPHPAATFYLRAEGES 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M GI GDLL+VD ++T HGD+VIA +DG FTVK LQL+P ++L+P N A++PI Sbjct: 61 MTRVGIFPGDLLVVDKSLTPRHGDVVIALLDGGFTVKTLQLKPRLRLLPANPAFAPIDPC 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +L++FGVV HV+ +R Sbjct: 121 MSLSLELFGVVTHVIGNLR 139 >UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U468_9DELT Length = 156 Score = 178 bits (452), Expect = 5e-44, Method: Composition-based stats. Identities = 55/126 (43%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + V GFPSPA DY+E+ +DLN+ L P AT+FV+ +GDSM I GD+L+ Sbjct: 31 PLPLAGEAVPAGFPSPAEDYIEKTLDLNEYLAPRPEATFFVRVAGDSMTGASIHHGDILV 90 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD ++T + G++VIA +DG FTVK+LQ ++L P N Y+P I+ + +++GVV Sbjct: 91 VDRSVTPNPGNVVIACIDGGFTVKRLQRTAGGLELAPENPDYAPTPITPDTDFEIWGVVR 150 Query: 133 HVVKAM 138 HV+ + Sbjct: 151 HVLHKL 156 >UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Chlorobiaceae RepID=Q3B3L8_PELLD Length = 212 Score = 177 bits (451), Expect = 7e-44, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 ADL + PL V GFPSPA D++E +DLN+ L++HP AT++ + G SMI+ GI Sbjct: 79 ADLSVPLPLPLAETAVSAGFPSPAEDHLEVTLDLNRALVRHPDATFYARVKGSSMIEAGI 138 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTL 125 ++GD+L++D ++ A GDI + +DGEFTVK++ + V L+P NSAYSPI I E Sbjct: 139 AEGDILVIDRSLDAKEGDIALCFLDGEFTVKRIAMDDGVLMLMPENSAYSPIRIGEESDF 198 Query: 126 DVFGVVIHVVKAMR 139 V+G+V +V+ R Sbjct: 199 QVWGIVTYVIHKSR 212 >UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=Bacteria RepID=Q5ZW56_LEGPH Length = 168 Score = 177 bits (450), Expect = 9e-44, Method: Composition-based stats. Identities = 58/125 (46%), Positives = 86/125 (68%), Gaps = 1/125 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+F+ +Q GFPSPA DY+E +DLN I+HPS+T+ ++A+G+SM++ GI GD L+V Sbjct: 43 LPVFASKIQAGFPSPADDYIEGYLDLNTKFIKHPSSTFVLQATGESMVEAGIFSGDWLLV 102 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D +I S G IVIAAV+GE TVK+L + VQL+P N + PI I+ + + ++GVV Sbjct: 103 DRSIEPSDGRIVIAAVNGELTVKRLSKKGGRVQLLPANPKFQPIDITEDSEMVIWGVVTL 162 Query: 134 VVKAM 138 V+ + Sbjct: 163 VLHEL 167 >UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F9F Length = 191 Score = 176 bits (448), Expect = 2e-43, Method: Composition-based stats. Identities = 65/141 (46%), Positives = 87/141 (61%), Gaps = 6/141 (4%) Query: 2 LFIKPADLREIVTFPL--FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 +F P++L + PL FS V GFPSPA D+VE+R+DLN LI AT+FV GD Sbjct: 54 IFTAPSELG---SQPLAWFSHKVPAGFPSPADDHVEKRLDLNDYLIAQKEATFFVSIKGD 110 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPIT 118 SMID I DGD++IVD + A GDIV+A++DGEFTVK L +L+P NS Y I Sbjct: 111 SMIDASIHDGDIVIVDRSKDAKIGDIVLASIDGEFTVKTLAKHLSHPRLLPANSEYKYID 170 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I+ +++GVV V+ + Sbjct: 171 ITEGMVFEIWGVVTGAVRKFK 191 >UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta proteobacterium KB13 RepID=B6BWB2_9PROT Length = 194 Score = 176 bits (446), Expect = 2e-43, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 1/132 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +++ + LFS V GFPSPA D+ E R+DLN+ LI AT+FV+ GDSMID GI D Sbjct: 63 VQKPLPITLFSHKVPAGFPSPADDHAESRLDLNEYLISQTEATFFVRIKGDSMIDAGILD 122 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 D++IVD + +AS DIV+A++DGEFTVK L + L+P N + PI I ++ Sbjct: 123 NDIVIVDRSKSASINDIVLASIDGEFTVKVLAKNNKRPYLMPANKEFKPIYIEEGSQFEI 182 Query: 128 FGVVIHVVKAMR 139 +GVV V+ + Sbjct: 183 WGVVTGSVRKFK 194 >UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PC11_9BACT Length = 152 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L PA+ + PL V+ GFPSPA DY+E IDLN +L++H AT++V+ SGDSM Sbjct: 11 LTFHPAEFGAKMPIPLAEQSVKAGFPSPAQDYMEGEIDLNDILVRHREATFYVRISGDSM 70 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---VQLIPMNSAYSPIT 118 D GI DGDL +VD I S+G+ VIA VDGEFT+K+ ++ + LIP N +SPI Sbjct: 71 QDAGILDGDLAVVDRQIEPSNGNFVIAFVDGEFTIKQFKIDESGTFGWLIPWNKNFSPIR 130 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + + ++GVV +V+ + Sbjct: 131 VDETNRFMIWGVVTYVIHQI 150 >UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZEK7_SYNY3 Length = 144 Score = 175 bits (444), Expect = 5e-43, Method: Composition-based stats. Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + PL++ V GFPSPA DY+E ++DLNQ LI+HP+AT+FV+ +GDSMI GI G Sbjct: 15 RTVYELPLYACPVSAGFPSPAEDYLEGKLDLNQYLIKHPAATFFVRVTGDSMIGAGIHAG 74 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D+LIVD ++ G +VIA V+GE VK+L++ + L NS Y P+ I+ +V+ Sbjct: 75 DILIVDRSLEPRDGKVVIAVVNGELLVKRLRMEKQKIYLASENSDYPPLVITDLMDFEVW 134 Query: 129 GVVIHVVKAM 138 GVV +V+ + Sbjct: 135 GVVTNVIHPL 144 >UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Gammaproteobacteria RepID=A1WWJ0_HALHL Length = 142 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 97/133 (72%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + PLF + V GFPSPA DYV++ +DLN+L I+HP+ATYFV+A+G+SM+ GI Sbjct: 10 AREPAALRRPLFLERVAAGFPSPAQDYVDRALDLNELCIEHPAATYFVRAAGESMLGVGI 69 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 GD+L+VD A+ A H DIVIAA GE TVK+L+LRPT++L+ N A+ PI I+ + L+ Sbjct: 70 HPGDVLVVDRALEARHRDIVIAAWQGELTVKRLELRPTLRLVAENDAFPPIDIAEPEMLE 129 Query: 127 VFGVVIHVVKAMR 139 +FGVV V+ A+R Sbjct: 130 IFGVVTFVIHALR 142 >UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group RepID=Q7NVL0_CHRVO Length = 198 Score = 174 bits (442), Expect = 8e-43, Method: Composition-based stats. Identities = 54/127 (42%), Positives = 77/127 (60%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ PLF+ V G P PA D E IDLN L+ P T+ VK GDSM GI DGDLL Sbjct: 71 LSLPLFAGSVPAGSPVPADDLKETDIDLNTHLVSRPGDTFMVKVKGDSMQGAGIHDGDLL 130 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V+ + G +V+AA++GE TVK+L+ P V+L+P N AY PI + + + ++GVV Sbjct: 131 LVERSREPRSGKVVVAALNGELTVKRLERGPAGVRLLPENPAYQPIDVPEDSSFHIWGVV 190 Query: 132 IHVVKAM 138 V+ + Sbjct: 191 TSVIHKV 197 >UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV08_9SYNE Length = 142 Score = 173 bits (439), Expect = 2e-42, Method: Composition-based stats. Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S V GFPSPA D+++ I+LN+ LI HPSAT+ V+A G SM+ GI DLLIV Sbjct: 17 LPLYSCPVSAGFPSPATDHLDGHINLNEHLIPHPSATFLVRADGWSMVGEGIHHEDLLIV 76 Query: 75 DSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D + HG +V+AA+DGE TVKKL Q L+ N Y I + + + ++GVVIH Sbjct: 77 DRSEEPRHGRVVVAAIDGELTVKKLCQKEQQTFLMAANPDYPSIELGEDADVRIWGVVIH 136 Query: 134 VVKAMR 139 ++++MR Sbjct: 137 IIRSMR 142 >UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W5K4_MAGSA Length = 156 Score = 172 bits (437), Expect = 3e-42, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P++S LV GFPSPA D++E ++DL++L+++ P+AT+F +A GDSM GI GDLL+ Sbjct: 28 TAPIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGIHSGDLLV 87 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD ++ GDIV+A +DG TVK L+ +L N Y ++ +D + ++GVV Sbjct: 88 VDRSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVT 147 Query: 133 HVVKAM 138 V A+ Sbjct: 148 FSVSAL 153 >UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1D7X6_LARHH Length = 206 Score = 172 bits (436), Expect = 4e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PA L ++ PL + V+ G PSPA DYVE +DLN LI +T+ V+A G+SM Sbjct: 73 PARLAPVLGMPLHAAGVRAGMPSPADDYVEDTLDLNHYLIDDAPSTFLVRAKGESMTGAH 132 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 + DGD+L+VD + T S GDIV+AA++GEFTVK+LQ + V L N Y I S E Sbjct: 133 VFDGDILVVDKSRTPSSGDIVVAAIEGEFTVKRLQRQGGRVILKAANPDYPDIVPSYEQE 192 Query: 125 LDVFGVVIHVVKAM 138 L ++GVV V+ Sbjct: 193 LVIWGVVTGCVRRF 206 >UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6J8_9GAMM Length = 182 Score = 171 bits (435), Expect = 6e-42, Method: Composition-based stats. Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 3/136 (2%) Query: 4 IKP--ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 IKP AD + PL++ VQ GFPSPA DYVE +DLNQ LI+HPSAT+ + A+G+SM Sbjct: 44 IKPFLADEYTTYSIPLYASKVQAGFPSPADDYVECSLDLNQALIRHPSATFILIAAGESM 103 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITIS 120 ID GI GD LIVD ++ A G IVIAA++GE TVK+L + VQL+P N + I I+ Sbjct: 104 IDAGIHPGDKLIVDRSVEAVDGKIVIAALEGELTVKRLSRKANRVQLLPANPKFKSIDIT 163 Query: 121 SEDTLDVFGVVIHVVK 136 + + ++GVV++++ Sbjct: 164 EDSEMVIWGVVMNIIH 179 >UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=SAMA_SALTY Length = 140 Score = 171 bits (434), Expect = 6e-42, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 3/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L + P T PLF++ GFPSPAADY E+ +DLN I+ P+AT+FV+A GDS Sbjct: 2 LLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDS 61 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M + G+ GDL++VD A GDIVIA DGEFTVK+LQL+P + L+P+N AY + Sbjct: 62 MKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYP- 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + L +FGVV + R Sbjct: 121 --EELQIFGVVTAFIHKTR 137 >UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enterobacteriaceae RepID=Q8L2B9_PROVU Length = 138 Score = 171 bits (433), Expect = 7e-42, Method: Composition-based stats. Identities = 69/131 (52%), Positives = 93/131 (70%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +L + P F L+ GFPSPA+DY + IDLN+LLI HP+ TYF++ SG SMID I Sbjct: 6 CELPAGIKLPFFEALIPAGFPSPASDYSKNNIDLNELLITHPAGTYFLRVSGTSMIDANI 65 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 SDGD++IVDS++ A+ G+IVIA++DGEFTVK+LQ P LIPMN +SPI I S + Sbjct: 66 SDGDIVIVDSSLQANDGNIVIASIDGEFTVKQLQKTPFPALIPMNPDFSPIPIPSGSEFN 125 Query: 127 VFGVVIHVVKA 137 +FGVV +++ Sbjct: 126 LFGVVTYIIHK 136 >UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Betaproteobacteria RepID=Q0ACZ4_NITEC Length = 147 Score = 170 bits (432), Expect = 1e-41, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 2/134 (1%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P + E V PL+S V+ GFPSPA D++ +RIDL+ LI+HP AT+ ++ G SM G Sbjct: 15 PVQVGEPVYIPLYSG-VRAGFPSPADDFLLKRIDLSNELIKHPEATFLMRIKGHSMTMAG 73 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDT 124 I DGD+++VD A+ HG IVIA VDGEFT K+L L +L P N Y I Sbjct: 74 IDDGDIVVVDKAVKPEHGKIVIACVDGEFTCKRLYLLDGETRLQPANPDYKDIIFKDGQI 133 Query: 125 LDVFGVVIHVVKAM 138 L+V+GVV +K Sbjct: 134 LEVWGVVTSCIKQF 147 >UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB83_KANKD Length = 140 Score = 170 bits (431), Expect = 1e-41, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 79/125 (63%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S + GFP +++E + L+QLLIQ+P+ T+F K GDSMI GI D+L+V Sbjct: 16 IPLYSGKISAGFPGVVDEHMEDTLSLDQLLIQNPATTFFAKVEGDSMIGAGIFQNDILVV 75 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 D ++TA D+V+A +D EFTVK+L ++L N AY I I+ E L ++GVV + Sbjct: 76 DRSLTAKDKDVVVAMLDNEFTVKRLCTSGALRLQAENPAYQDILITGESELVIWGVVTGL 135 Query: 135 VKAMR 139 +++R Sbjct: 136 ARSLR 140 >UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S24 n=4 Tax=Bacteria RepID=Q30X28_DESDG Length = 208 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 83/124 (66%), Gaps = 1/124 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL V GFPSPA DY+++R+DLN+ L+++P +T++V+ G+SM D GI GD+L+VD Sbjct: 85 PLMLSCVAAGFPSPADDYIDRRLDLNEYLVRNPESTFYVRVHGESMRDAGIWAGDILVVD 144 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A+ + G +VIA +DGE TVK+L+ + L+P N YSP+ +S + V+GVV V Sbjct: 145 RAVQPATGRVVIAVLDGELTVKRLKKEGDRLLLVPENPDYSPVDVSGREDFSVWGVVTCV 204 Query: 135 VKAM 138 + + Sbjct: 205 LHRV 208 >UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S24 n=7 Tax=cellular organisms RepID=A1VAL5_DESVV Length = 202 Score = 170 bits (431), Expect = 2e-41, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P ++ PL V GFPSPA DY+++ +DLN +++HP+AT++V+ASG+SM+ G Sbjct: 69 PVKDPPRLSRPLMLSRVAAGFPSPADDYIDRSLDLNDHIVKHPAATFYVRASGESMLGAG 128 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 + DGDLL+VD A+ G +VIAAVDGE TVK+L + L P N+AY P+ I+ + Sbjct: 129 VHDGDLLVVDRALDPRPGRVVIAAVDGELTVKRLVREGGRLLLAPENAAYPPLDITGRED 188 Query: 125 LDVFGVVIHVVKAM 138 ++V+GVV HVV A+ Sbjct: 189 VEVWGVVTHVVHAL 202 >UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ Length = 143 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 70/139 (50%), Positives = 95/139 (68%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ML ++ + PLF + V CGFPSPA DYVE+R+ L+ I HP+ATYF++ASG+S Sbjct: 5 MLMMRLLPQPDAEGLPLFLEKVACGFPSPAQDYVEKRVSLDAHCIVHPNATYFLRASGES 64 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M GI DGDLL+VDSA+ DIV+AA++GEFTVK L+L P QL+PMN ++PI + Sbjct: 65 MNGAGIEDGDLLVVDSALKPQENDIVVAALEGEFTVKTLRLHPVAQLVPMNPDFAPIPLV 124 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + + +FGVV V+K R Sbjct: 125 GDADVVIFGVVTWVLKKRR 143 >UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXG1_PSEA7 Length = 147 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 78/130 (60%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + PLF V GFPSPA D++E + L++L + HP+AT+F++ GDSM GI DG Sbjct: 15 RPGLRLPLFLSRVAAGFPSPAEDHIEASLSLDELCVVHPAATFFLRVVGDSMTGLGIFDG 74 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D+L+VD +IT G +V+A V+GEFT K+L L N AY I + + L+VF Sbjct: 75 DILVVDRSITPRAGMVVVAVVNGEFTCKQLAYEHGAPVLRAANKAYPDIRLRDGEDLEVF 134 Query: 129 GVVIHVVKAM 138 GVV + + Sbjct: 135 GVVTRCIHKL 144 >UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas RepID=A3YBK7_9GAMM Length = 149 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 67/127 (52%), Positives = 91/127 (71%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V P + + V GFPSPA D++E+++DLN L I+HP AT+FV+ G+SM + GI + D+L Sbjct: 20 VQIPFYVEPVSAGFPSPADDFIERKLDLNALCIKHPEATFFVRVQGESMSEAGIYNHDVL 79 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 IVD ++TA HGD VIA + GE TVK+L L+P V L P N AY+ I I+ E LDVFGVVI Sbjct: 80 IVDRSLTARHGDFVIACIHGEMTVKELVLKPNVALRPKNKAYAAIAITEESELDVFGVVI 139 Query: 133 HVVKAMR 139 VV+ ++ Sbjct: 140 SVVRNIQ 146 >UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S24 n=8 Tax=Prochlorococcus marinus RepID=Q31B22_PROM9 Length = 138 Score = 168 bits (427), Expect = 4e-41, Method: Composition-based stats. Identities = 55/126 (43%), Positives = 80/126 (63%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL +D V GFPSPA DY E+ IDLN+ LI +P +T+F++ GDSMI+ GI D DL+I Sbjct: 12 KIPLLNDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVRGDSMINAGIKDKDLII 71 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD ++TA G+I+IA +DGEFT+K+L + L N Y + + ++GVVI Sbjct: 72 VDKSLTAKPGNIIIAMIDGEFTIKRLSIKNDELYLKAENHNYPDFRFKNHIDVQIWGVVI 131 Query: 133 HVVKAM 138 + + + Sbjct: 132 YSIHSY 137 >UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n=3 Tax=Proteobacteria RepID=C8X193_DESRD Length = 148 Score = 168 bits (426), Expect = 5e-41, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 1/124 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL++ V GFPSPA D++++ +DL++ LI + +AT+ V+ SGDSM GI DGD+L+VD Sbjct: 25 PLYTARVPAGFPSPADDHLDRPLDLHEYLISNEAATFMVRVSGDSMSGAGILDGDILVVD 84 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 +++ G IV+A +DGE TVK+L R +L + Y P+T+ E V+GVV V Sbjct: 85 RSLSPRTGHIVVAVLDGELTVKRLTRRGEQWRLEAAHDGYPPLTVRPEQEFLVWGVVAGV 144 Query: 135 VKAM 138 V+ + Sbjct: 145 VRRL 148 >UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=Prevotella RepID=C9PZS8_9BACT Length = 146 Score = 167 bits (424), Expect = 8e-41, Method: Composition-based stats. Identities = 52/142 (36%), Positives = 86/142 (60%), Gaps = 5/142 (3%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 + I + E + P+ L + GFPSPA DY+ + +D N+ LI++P AT++ + GDSM Sbjct: 4 IQILQGNFNEKLKLPIAEGL-KAGFPSPAEDYLHETLDFNRDLIRNPEATFYGRVEGDSM 62 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL----QLRPTVQLIPMNSAYSPI 117 I+ GI DGD+ ++D ++ GD+V+ ++ EFT+K L + ++L P N + PI Sbjct: 63 IEAGICDGDIAVIDRSLEPRDGDVVVGYINEEFTIKYLDLCHREEGYIELRPANPNFCPI 122 Query: 118 TISSEDTLDVFGVVIHVVKAMR 139 I +D+ +V+GVVI +K R Sbjct: 123 RIDEDDSFEVWGVVIWTIKNWR 144 >UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=Enterobacteriaceae RepID=C8T455_KLEPR Length = 148 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 74/139 (53%), Positives = 92/139 (66%), Gaps = 4/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L + P + PLFS+ GFPSPA DYVEQ +DLN L I+HPSATYF++ASG+S Sbjct: 11 VLQVHPQTPAR-LAIPLFSEACPAGFPSPAGDYVEQELDLNTLCIRHPSATYFLRASGES 69 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M D G+ DGD+LIVD A TA GDIVIA +D FTVK+L+LRP L PMN Y + Sbjct: 70 MRDIGLHDGDILIVDRAETAQEGDIVIAEIDRGFTVKRLRLRPRPALEPMNPDYPTLYP- 128 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +TL +FGVV H + R Sbjct: 129 --ETLTLFGVVTHFIHRTR 145 >UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID=Q0VP67_ALCBS Length = 163 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 + P FS+ V GFPSPA Y+++ +DLN+L I+HP++T+ ++ GDSM+D GI GD+LI Sbjct: 30 SLPFFSEPVSAGFPSPAQGYLDEHLDLNRLCIRHPASTFLLRVEGDSMVDAGIYSGDILI 89 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 VD ++ A GD+V+A+++GEFTVK+LQL P L P N+AY+PI I E+ LD+FGVV Sbjct: 90 VDRSLEAVAGDVVVASLEGEFTVKELQLLPVPMLKPRNAAYAPILI-GEEGLDLFGVVTF 148 Query: 134 VVKAMR 139 + +R Sbjct: 149 SLHTLR 154 >UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2_9GAMM Length = 160 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 55/134 (41%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D + P+ +Q GFPSPA D++E R+DLN LLI P+AT++++ GDSM D G+ Sbjct: 22 PDFGSRMPLPVAGYSIQGGFPSPAEDFLESRLDLNDLLIARPAATFYLRYQGDSMRDAGL 81 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 GD+L+VD A + HGDIV+A VDGE T K+L R ++L + + I + + L Sbjct: 82 HPGDILVVDRAESPRHGDIVVAVVDGEMTCKRLYNRAGLIRLDAEHPEFPNIELRQDSEL 141 Query: 126 DVFGVVIHVVKAMR 139 ++GVV VK + Sbjct: 142 VIWGVVTAAVKRFK 155 >UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1_SYNS3 Length = 147 Score = 166 bits (421), Expect = 2e-40, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 83/130 (63%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE + PL D + GFPSPA DY++ IDLN+ LI+HPS+T+F++ SGDSM GI G Sbjct: 18 RESLCLPLAHDQIAAGFPSPADDYIDVGIDLNEQLIRHPSSTFFLRVSGDSMTGEGIHHG 77 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 DLL+VD ++ G +V+A +DG FT+K+L + R ++L N Y + + + ++ Sbjct: 78 DLLVVDRSLDPHPGRVVVAILDGAFTLKRLVRHRGHLRLEAANPDYPHLDLHHCGDVQIW 137 Query: 129 GVVIHVVKAM 138 GV IHV+ + Sbjct: 138 GVAIHVIHPL 147 >UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX Length = 146 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 56/127 (44%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + + P + + GFPSPA Y +Q ++L++ ++HPSATYF++ SG SM DG I DG Sbjct: 12 SRVHSIPFYLQRISAGFPSPAQGYEKQELNLHEYCVRHPSATYFLRVSGSSMEDGRIHDG 71 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSE-DTLDVF 128 D+L+VD ++TASHG IV+A + EFTVK+L LRP L+PMN + I + ++++++ Sbjct: 72 DVLVVDRSLTASHGSIVVACIHNEFTVKRLLLRPRPCLMPMNKDFPVYYIDPDNESVEIW 131 Query: 129 GVVIHVV 135 GVV H + Sbjct: 132 GVVTHSL 138 >UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTX3_METML Length = 205 Score = 165 bits (419), Expect = 4e-40, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 4/141 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F PA E + PLFS V G PSPA D++EQR+D N+ LI T+FV G SM+ Sbjct: 65 FELPALETESMELPLFSSKVSAGLPSPAEDHLEQRLDPNEFLIDKKDTTFFVTIQGYSMV 124 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNS--AYSPIT 118 D G+ GD +VD A AS GDIV+A +DGEFT+K L V+L+P NS Y+PI Sbjct: 125 DVGLLPGDKAVVDRAKIASIGDIVLAVIDGEFTIKTLSRSKEGNVRLLPANSSADYAPIN 184 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I+ E +V+GVV + + Sbjct: 185 ITEEMNFEVWGVVTGSFRRFK 205 >UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE76_METSD Length = 148 Score = 165 bits (418), Expect = 4e-40, Method: Composition-based stats. Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 11/146 (7%) Query: 1 MLFIKPADLREIV--------TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATY 52 ++ ++PA++ I+ PL+ + V GFPSPAAD+VE R+ + L+ +P+ATY Sbjct: 5 IISLQPANVTAIMAHHPGVYPPMPLYDNPVAAGFPSPAADHVEDRLSADDYLVGNPTATY 64 Query: 53 FVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNS 112 FV+ GDSMID GI DGD+L+VD +IT S G +V+A +DGEFTVK L QL+P N Sbjct: 65 FVRVKGDSMIDAGIFDGDVLVVDRSITPSIGHVVLAELDGEFTVKYL---GRGQLLPANP 121 Query: 113 AYSPITISSEDTLDVFGVVIHVVKAM 138 AY PI T+++ GVV ++ Sbjct: 122 AYQPIKFKDGQTVEIVGVVTGSMRRF 147 >UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQT5_9SYNE Length = 156 Score = 164 bits (417), Expect = 5e-40, Method: Composition-based stats. Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL+S + GFPSPA DY+E+ +DLN LI++P+AT+F +A GDSM GGI DGDLL Sbjct: 26 VELPLYSCRLSAGFPSPADDYIEKTLDLNAHLIENPAATFFARACGDSMEPGGIFDGDLL 85 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 I+D +I +G +V+ A++GE VK+L L N Y PI ++ + +GVV Sbjct: 86 IIDRSIEPRNGRVVVVALNGEMLVKRLHTTLDRTVLSADNRNYPPIEVTEFCSFHFWGVV 145 Query: 132 IHVVKAM 138 + M Sbjct: 146 KASIHMM 152 >UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GF16_SERP5 Length = 140 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 70/135 (51%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P E PL++D V GFPSPA DY+ RIDLN+ I HPSATYF+ ASG+SMI+ G Sbjct: 6 PTPTPEKQFIPLYADNVPAGFPSPAQDYIHARIDLNEYCISHPSATYFLIASGESMIEAG 65 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSED-T 124 I+DG +L+VD +I A HGDIVIA++ GEFTVK+L L P QL PMN + PI + + Sbjct: 66 ITDGSMLVVDRSIGACHGDIVIASIAGEFTVKRLCLHPVKQLEPMNPTFRPIPLPDDGAE 125 Query: 125 LDVFGVVIHVVKAMR 139 LD+ GVV+ + ++ Sbjct: 126 LDIVGVVVSTITRLK 140 >UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX74_DESAD Length = 144 Score = 164 bits (416), Expect = 7e-40, Method: Composition-based stats. Identities = 51/126 (40%), Positives = 84/126 (66%), Gaps = 1/126 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PL V GFPSPA DY+++++DLN+ LI + +AT+ ++A GDSMID I +GD+L Sbjct: 17 IELPLLLSEVIAGFPSPADDYIDKKMDLNEHLISNKAATFLIRAYGDSMIDANIKEGDIL 76 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++ A + I+IA +GE TVK+++ R + L+P N Y + I+ E + +V+GVV Sbjct: 77 VVDRSMDAHNNSIIIAIFNGELTVKRIKQRAGRLFLLPENPEYPLLEITEETSFEVWGVV 136 Query: 132 IHVVKA 137 +++ Sbjct: 137 TYIIHK 142 >UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepID=C9Y1S5_CROTZ Length = 155 Score = 164 bits (415), Expect = 1e-39, Method: Composition-based stats. Identities = 64/127 (50%), Positives = 84/127 (66%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V P ++DL+ GFPSPAADY++ IDL LI HPS+TY ++ +GDSM D GI DG LL Sbjct: 23 VNIPFYADLISAGFPSPAADYIDSGIDLVSHLIAHPSSTYVLRVAGDSMRDAGILDGSLL 82 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +VD ++ A H DIV+A + GEFTVK+L P QL N AY PI + D L++ GVVI Sbjct: 83 LVDFSLHAKHNDIVVANIGGEFTVKRLVTYPVAQLRAENPAYPPIAVYDADDLEIVGVVI 142 Query: 133 HVVKAMR 139 V+ + Sbjct: 143 CVINTLH 149 >UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=Q5NWB9_AZOSE Length = 158 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 1/129 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P+ R + PL V GFPSPA DY ++++D+N L+++P +T++ GDSM Sbjct: 23 PSPTRGCLAIPLGLAPVSAGFPSPAEDYEDKKLDINDYLVRNPVSTFYFPVKGDSMQGAQ 82 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 + DGD+L+VD ++ +HG +VIA V+GE VK+ R + L+ N Y P+ ++ Sbjct: 83 VFDGDILVVDRSVMPAHGHVVIAFVNGERLVKRFHRRGDRIALLAENPGYPPLELTEGSE 142 Query: 125 LDVFGVVIH 133 L ++GVVI Sbjct: 143 LVIWGVVIG 151 >UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ28_9PROT Length = 206 Score = 162 bits (412), Expect = 2e-39, Method: Composition-based stats. Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 4/141 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F P + PLF+ V GFPSPA D+VE+R+D+++ LI H ++T+FV G+SMI Sbjct: 66 FFTPVISEQPTLLPLFATKVAAGFPSPADDHVEKRLDVSEFLIDHAASTFFVTIRGESMI 125 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNS--AYSPIT 118 D G+ D ++VD T SHGDIV+A VD EFT+K L +L+P NS AY PI Sbjct: 126 DVGLLPDDKVVVDRCKTPSHGDIVLAVVDREFTIKILDYGANKMPRLMPANSTGAYRPIY 185 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I + ++FGVV + + Sbjct: 186 IRPDTQFEIFGVVTGSFRRFK 206 >UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria RepID=Q6F8Y7_ACIAD Length = 203 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 61/138 (44%), Positives = 84/138 (60%), Gaps = 5/138 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + +I PL ++ V G PSPA ++VEQ +DLN+ L+++ +AT+ VKA+ SM+D GI Sbjct: 66 PNPTKIYQIPLATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAGI 125 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-----PTVQLIPMNSAYSPITISS 121 D LIVD +ITA GDIVIA VD EFTVK+L + P V L N + I I Sbjct: 126 DIDDPLIVDRSITAKAGDIVIAMVDNEFTVKRLMIDHHFHPPKVWLKAENPDFQNIYIDE 185 Query: 122 EDTLDVFGVVIHVVKAMR 139 L ++GVV + +K MR Sbjct: 186 GQELVIWGVVTYNLKPMR 203 >UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular organisms RepID=A3M2E1_ACIBT Length = 167 Score = 161 bits (408), Expect = 6e-39, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 1/131 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 I P S+ + GFPSPA DYV++ +D+N+ LI++ +AT+ VK SMI+ GI Sbjct: 34 SSIKEIPFVSERISAGFPSPAQDYVDKLMDMNEHLIRNEAATFIVKVCSLSMINAGIDIN 93 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D L+VD ++ A + DIV+A ++ EFTVK+L++ + + L N Y I + L V+ Sbjct: 94 DELVVDRSLEAKNNDIVVALIENEFTVKRLKIEGSKIWLKAENPDYQDIYFNEGQKLIVW 153 Query: 129 GVVIHVVKAMR 139 GVV ++K +R Sbjct: 154 GVVTFILKNVR 164 >UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7JBK7_ACIF2 Length = 164 Score = 161 bits (407), Expect = 9e-39, Method: Composition-based stats. Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 1/131 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 T P + GFPSPA YVEQ+IDLN LIQH AT+ ++ SG SM D GI D Sbjct: 34 WHRGGTLPFMVSRIAAGFPSPADGYVEQQIDLNTHLIQHREATFILRVSGWSMRDVGIFD 93 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 GD ++VD AIT G IV+AA++G+ TVK+L+ + V L+ N + I + + L + Sbjct: 94 GDEILVDRAITPVDGKIVVAAINGDLTVKRLRRIGSAVHLVAENPEFPTIILKEGEELCI 153 Query: 128 FGVVIHVVKAM 138 +GVV V+ + Sbjct: 154 WGVVTRVLHRV 164 >UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXC0_9BACT Length = 152 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 81/126 (64%), Gaps = 4/126 (3%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 + ++ GFPSPA DY++ RID N+ LI+HP AT++ + SGDSM+ GI DGD+ ++D A Sbjct: 19 IAPAIKAGFPSPAEDYLQDRIDFNRDLIKHPEATFYGRVSGDSMVGVGIYDGDIAVIDRA 78 Query: 78 ITASHGDIVIAAVDGEFTVKKLQ----LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 DIV+A V+GEFT+K L ++L+P N + PI + ++D +++GVV Sbjct: 79 EEPKDKDIVVAYVNGEFTLKFLNTAHAQEGYIELMPANENFKPIKVVNDDDFEIWGVVTF 138 Query: 134 VVKAMR 139 V+K + Sbjct: 139 VIKNCK 144 >UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=IMPA_ECOLX Length = 145 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 3/140 (2%) Query: 2 LFIKPADLR--EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 ++ +PAD + PLF+D Q GFPSPA DY EQ +DLN I P+AT+F++ASG+ Sbjct: 4 VYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDLNSYCISRPAATFFLRASGE 63 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITI 119 SM G+ +GDLL+VD A HGDIVIA +DGEFTVK+L LRP L P++ + T+ Sbjct: 64 SMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSDSPEFRTL 123 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 E + +FGVV HV+ R Sbjct: 124 YPE-NICIFGVVTHVIHRTR 142 >UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ2_9BACT Length = 127 Score = 160 bits (406), Expect = 1e-38, Method: Composition-based stats. Identities = 55/128 (42%), Positives = 81/128 (63%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL V GFPSPA D+VE +++++ LI+HP A++F++ G+SM GI GD+L+ Sbjct: 3 TCPLLLHSVNAGFPSPADDFVEMQLNIHDHLIKHPCASFFLRVGGESMKGAGIYPGDILV 62 Query: 74 VDSAITASHGDIVIAAVDGEFTVK--KLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 VD ++ A DIVIA ++GEFTVK K +LI N AY+PI D ++++GVV Sbjct: 63 VDRSLQAQKSDIVIAIIEGEFTVKQLKFNQHGKPRLIAANRAYAPI---ECDNIEIWGVV 119 Query: 132 IHVVKAMR 139 VV+ + Sbjct: 120 TGVVRKYK 127 >UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5S9_9PROT Length = 159 Score = 160 bits (405), Expect = 1e-38, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVE+R+ L++ LIQH +T+F++ +G SM D GI DGDLL+VD Sbjct: 37 LLRKAVPAGFPSPADDYVERRLSLDEHLIQHRESTFFMRVAGHSMRDLGIFDGDLLVVDR 96 Query: 77 AITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++ A+HG +V+A +DGEFTVK+ L L + Y I I++E ++GVV V Sbjct: 97 SVPATHGCVVVAVIDGEFTVKQLLYTAQGKVLRAAHPDYPDIAITAEHDFSIWGVVQWNV 156 Query: 136 KAM 138 + Sbjct: 157 HKV 159 >UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=Alphaproteobacteria RepID=A8U3Z8_9PROT Length = 147 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D + L++ V GFPSPA D+++ ++DL+ LI+ P+AT+FV+A G+SM D G+ Sbjct: 14 DKPSHLALVLYASRVSAGFPSPADDHLDGKLDLSLHLIRRPAATFFVRAQGESMRDAGLF 73 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLD 126 DGDLLIVD AIT DIVIAAV+GE TVK+L+ + T L N +S I + + + Sbjct: 74 DGDLLIVDRAITPQVSDIVIAAVNGELTVKRLKKLQGTWALSAENPEFSDIHL-GDAGCE 132 Query: 127 VFGVVIHVVKAM 138 V+GVV H ++ Sbjct: 133 VWGVVTHSIRQH 144 >UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S24 n=14 Tax=Bacteroidetes RepID=Q11V04_CYTH3 Length = 142 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 3/140 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M+ + D P SD + CGFPSPA DY++ IDLN+ LI +P+AT+ + G+S Sbjct: 1 MIELYQIDSSTATLIPFISDKLVCGFPSPATDYLDLSIDLNRELITNPNATFCGRVKGNS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK---LQLRPTVQLIPMNSAYSPI 117 MID GI +GD+LI+D + + I + +DGEFTVK+ + + + L+P N + PI Sbjct: 61 MIDAGIEEGDVLIIDRSKELTDNSIAVCFLDGEFTVKRVKVYKSKKEIHLMPSNKNFKPI 120 Query: 118 TISSEDTLDVFGVVIHVVKA 137 ++ ++ ++G+V++ +K Sbjct: 121 IVTPDNEFTIWGIVVYTIKK 140 >UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cellular organisms RepID=C5T315_ACIDE Length = 148 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + PL V+ GFPSPA D+V +R+D+ QLL++HP ATYF + GDSM D GI DG Sbjct: 18 QSLVLPLCGVSVRAGFPSPADDFVVERLDIMQLLVKHPQATYFWRVRGDSMRDAGIEDGS 77 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 ++ VD AI H IV+A VDGE TVK L R ++L N Y I T++V+G Sbjct: 78 IIAVDRAIKPKHNSIVVAIVDGECTVKYLHQRAGRIKLRAANPTYPDIIPRDSQTIEVWG 137 Query: 130 VVIHVVKA 137 VV VK Sbjct: 138 VVSGCVKR 145 >UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=uncultured Bacteroidetes bacterium RepID=Q2YI98_9BACT Length = 145 Score = 158 bits (401), Expect = 4e-38, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 81/127 (63%), Gaps = 4/127 (3%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L + ++ GFPSPA DY+ +D N+ LI+HP AT++ + GDSM+D GI DGD+ ++D Sbjct: 18 LIAPEIKAGFPSPAEDYLHDSLDFNRDLIRHPEATFYGRVDGDSMVDAGICDGDIAVIDR 77 Query: 77 AITASHGDIVIAAVDGEFTVKKL----QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 ++ H D+++A V+GEFT+K L + ++L P N + PI I + D +V+GVV+ Sbjct: 78 SVEPQHNDVIVAYVNGEFTIKYLDLSHKEEGFIELRPANQNFKPIRIDANDKFEVWGVVV 137 Query: 133 HVVKAMR 139 +K + Sbjct: 138 WTIKNWK 144 >UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV3_METSD Length = 153 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 57/130 (43%), Positives = 83/130 (63%), Gaps = 4/130 (3%) Query: 12 IVTFPLFSDLVQCG---FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + P++S V+ G FPSPA DY + +DLN+ L+++P AT+F SGDSMI GI + Sbjct: 22 ALPRPIYSGKVRAGQSRFPSPAQDYEQAELDLNKRLVRNPPATFFFTVSGDSMIGAGIFE 81 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 G L+VD +I A IV+A V+GE VK+L R V+L+ N AY+PIT++ L + Sbjct: 82 GSTLVVDRSIKAKSTSIVVAMVEGELMVKRLYKRGAVVKLLSDNPAYAPITLTEGQELII 141 Query: 128 FGVVIHVVKA 137 +GVV +V+ A Sbjct: 142 WGVVTYVINA 151 >UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD (HTH, RecA-mediated autopeptidase) n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C3_METI4 Length = 188 Score = 157 bits (399), Expect = 8e-38, Method: Composition-based stats. Identities = 57/132 (43%), Positives = 84/132 (63%), Gaps = 4/132 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E +++PLF V GFP+PA D++E+ + L++LLI+ P+AT+FVKASG+SM GI DGD Sbjct: 55 EALSYPLFGCRVAAGFPNPADDHLEKSLSLDELLIKRPAATFFVKASGNSMEGEGIRDGD 114 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQL--IPMNSAYS-PITISSEDTLD 126 +L+VD A +G IV+AA++GE VKKL + L +P A + + I E L Sbjct: 115 ILVVDRAEKPKNGSIVVAAINGELVVKKLWMEAGHSWLKSVPAEGAKAFSMEIHEEVELV 174 Query: 127 VFGVVIHVVKAM 138 ++GVV V+ Sbjct: 175 IWGVVTAVIHKF 186 >UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5B2_9PROT Length = 153 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVEQRI L++ LI +T+F++ +G+SM GI DGDLL+VD Sbjct: 31 LLRRAVPAGFPSPADDYVEQRISLDEHLIGRRESTFFMRVAGESMRGLGIFDGDLLVVDR 90 Query: 77 AITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ A+ G +VIA VDGEFTVK+ L L + Y + I E ++GVV V Sbjct: 91 ALPATSGCVVIAVVDGEFTVKQLLHTSDGPVLRAAHPDYDDMRIQPEQDFSIWGVVSWNV 150 Query: 136 KAM 138 Sbjct: 151 HKH 153 >UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN99_9DELT Length = 144 Score = 157 bits (397), Expect = 1e-37, Method: Composition-based stats. Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P V P S LV GFPSPA DY+++ +DLN+ LI + +A++F++ +G+SM G Sbjct: 10 PRAESPEVLLPEVSALVPAGFPSPADDYLDRTLDLNEYLIHNQAASFFIRVAGESMQGAG 69 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 I GD+L+VD ++ +H IV+A +D E VK+L+ R L+P + + PI I+ Sbjct: 70 ILPGDILLVDRSVEPAHNKIVVAVLDDEMVVKRLRYRQGRGVLVPEHPGFRPIEITDAME 129 Query: 125 LDVFGVVIHVVKAM 138 ++GVV V++ + Sbjct: 130 AHIWGVVTAVIRKL 143 >UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=4 Tax=Bacteria RepID=A8GUC2_RICB8 Length = 139 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 54/133 (40%), Positives = 81/133 (60%), Gaps = 3/133 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + PLF VQ G+PSPA Y+ +DLN LI+HP +T+FV+ +GDSMID GI Sbjct: 9 CSVEKACELPLFDTKVQAGYPSPADGYMSNSLDLNSHLIKHPKSTFFVQVTGDSMIDAGI 68 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTL 125 + DLLIVD ++ ++ IVIA ++ EFTVK+L+ + L+P N + P I + Sbjct: 69 RENDLLIVDKSLPPTNNKIVIAVINNEFTVKRLKFINDEAYLMPENKDFPPTKIENGTY- 127 Query: 126 DVFGVVIHVVKAM 138 ++GVV V++ Sbjct: 128 -IWGVVTSVIQQF 139 >UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Pseudomonas RepID=B1J8T0_PSEPW Length = 152 Score = 153 bits (388), Expect = 2e-36, Method: Composition-based stats. Identities = 56/126 (44%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL+S V GFPSPAAD++E I L+++ Y VK GDSM GI GD++I Sbjct: 25 PLPLYSFHVPAGFPSPAADHLEGHISLDEIFDLRAPHVYLVKVEGDSMQGAGIYSGDIVI 84 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVFGVVI 132 VD A HGDIVIAAV+ E K+L R V L N AY P I D L ++GVV Sbjct: 85 VDRGREAEHGDIVIAAVNCEPVCKRLHRRDAVVILKSENPAYPPRYIMEGDELVIWGVVR 144 Query: 133 HVVKAM 138 + V+ Sbjct: 145 YSVRDH 150 >UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2ILA1_BEII9 Length = 149 Score = 153 bits (387), Expect = 2e-36, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 2/128 (1%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P F + + GFPSPA DY+++ IDLN LLI++ AT+ + G SM + GI GDLL+ Sbjct: 19 PLPYFLEGLCAGFPSPADDYLDESIDLNDLLIRNQPATFLWRVDGHSMREAGIFHGDLLV 78 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSP-ITISSEDTLDVFGVV 131 VD ++ + GDIV+ V+GE ++K+LQ+R + L N Y + + D ++++GVV Sbjct: 79 VDRSLAPADGDIVVVIVNGERSLKRLQIRKGQLTLSFENKDYPEGLALHEGDEIEIWGVV 138 Query: 132 IHVVKAMR 139 + R Sbjct: 139 RCSIHWHR 146 >UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE3_9ACTO Length = 146 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 78/125 (62%), Gaps = 4/125 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL DL G+PSP+ DY ++ IDLN+ LI++ AT+ V+ +GDSMI+ GISDGD LIV Sbjct: 25 LPLAPDLAPAGWPSPSQDYFDRDIDLNEHLIRNRPATFLVRVAGDSMINAGISDGDELIV 84 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D ++ AS G++VIA +DGE TVK+L +L P N Y I L ++GVV Sbjct: 85 DRSLEASEGNVVIAIIDGEMTVKRLHFGTHGPELHPANPTYP---ILHPSELQIWGVVTR 141 Query: 134 VVKAM 138 + + Sbjct: 142 CLHRL 146 >UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK22_9BURK Length = 142 Score = 150 bits (380), Expect = 1e-35, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L GFPSPA D RID+ ++L+++P++T+++ G SM + GI DGD LIVD Sbjct: 19 LIVCKTPAGFPSPAQDLAVNRIDIGEILVKNPTSTFYLCVKGHSMKEAGIEDGDHLIVDR 78 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++TA H IVIA +DG+ TVK+L + ++L N Y I ++GVV HV+ Sbjct: 79 SLTAKHNSIVIAEIDGDVTVKRLHKKNGVIRLKAANLTYPDIVPVPGQEWMIWGVVTHVI 138 Query: 136 KAM 138 K M Sbjct: 139 KDM 141 >UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=C0VG55_9GAMM Length = 161 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ + + V GFPSPA DY++++ID+N+ LI + AT+ VK SM + GI D L Sbjct: 33 MSISVAIEKVSAGFPSPAQDYIDKKIDMNEHLISNECATFIVKVGSLSMKNAGIDIDDEL 92 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 IVD ++ A H DIV+A +D +FTVK+L++ L N Y I + L ++GVV Sbjct: 93 IVDRSLDAKHDDIVVALIDNDFTVKRLKIEQHRTWLKAENPDYDDIHLKDGQQLIIWGVV 152 Query: 132 IHVVKAMR 139 ++K R Sbjct: 153 TFILKKAR 160 >UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE7_ECOK1 Length = 144 Score = 149 bits (376), Expect = 3e-35, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P FSDL+ CG SP A + + ++L++ ++++ +T+FV+A+G SMI+ GI+DG +L+VD Sbjct: 17 PFFSDLLSCGVMSPCAGHEDNELNLHEYVVRNRPSTFFVRAAGLSMINAGINDGAILVVD 76 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++TA HG IV+A VDGEFTVK L P + L+P N AY PI ++ E +L+++GVV + Sbjct: 77 RSLTARHGSIVVALVDGEFTVKILHTYPELLLMPSNPAYKPIRVNPE-SLEIWGVVTFAL 135 Query: 136 KAM 138 Sbjct: 136 NQF 138 >UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B4V8_METEA Length = 144 Score = 148 bits (374), Expect = 5e-35, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL + V+ GFPSPA D++EQ IDL +LL+ + +T+ V+ SGDSM+ + DGD+ Sbjct: 12 VPLPLLAGAVRAGFPSPAEDFIEQEIDLQRLLVPNRPSTFLVRVSGDSMVLARLFDGDIA 71 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++T S GDIV+ +DGE + K R VQL N + I ++ ++++G+V Sbjct: 72 VVDRSLTPSDGDIVVVDIDGERSFKIWSRRAGRVQLSFANPRFPEFEIQADAVVEIWGIV 131 Query: 132 IHVVKAMR 139 + R Sbjct: 132 SGSINPRR 139 >UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXI2_SYNAS Length = 195 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 4/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + P+ + V GFPSP + + + L++ L+ P A++ ++ SGDSM GI G Sbjct: 67 ERPFSIPMVGE-VAAGFPSPEEEELRDILSLDEYLVARPDASFLLQVSGDSMTGAGILPG 125 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 DL+IV+ +GD+VIA VDGE+T+K + + V L N Y I L + Sbjct: 126 DLVIVEKGREPKNGDVVIAEVDGEWTMKTFRKEKGEVYLEAANPKYP--IIRPRQELKLA 183 Query: 129 GVVIHVVKAMR 139 GVV VV+ Sbjct: 184 GVVTGVVRKYH 194 >UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IHW7_9CHRO Length = 182 Score = 146 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 84/140 (60%), Gaps = 3/140 (2%) Query: 1 MLFIKPADLREIVT-FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 + ++ P D T PL ++ V GFPSPA DYVE IDLN LI P++T+ ++ GD Sbjct: 13 LTWLGPIDTAAAGTGLPLATETVAAGFPSPADDYVEASIDLNAALIPRPTSTFLMRVEGD 72 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPIT 118 +M GI GDLL++D ++ A G V+ DG F +++L+ RP QL+ + A +P+ Sbjct: 73 AMRAAGIHHGDLLVIDRSVNARPGCTVVVVHDGRFLLRQLRGQRPPWQLVASDPAIAPMV 132 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + +D L ++GVVIH V + Sbjct: 133 LQDDDAL-IWGVVIHAVHHL 151 >UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5N8_9CLOT Length = 475 Score = 145 bits (366), Expect = 4e-34, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E+ P+F++ + G P D +E + + ++ T+ ++ GDSM++ I Sbjct: 344 NENELEDIPMFNN-IAAGTPIEMNDNIEGSFCIPKYWLERGKDTFILRVKGDSMVEKEIC 402 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLD 126 DGDL+++ TA+H +IV A++DGE T+K L L + +L+P NS Y+PI++ ++ Sbjct: 403 DGDLVVIKKQGTANHNEIVAASLDGEATLKTLNLNGNLPKLMPANSLYAPISL-ENKEVN 461 Query: 127 VFGVVIHVVKA 137 + GV I ++K Sbjct: 462 ILGVAIGIIKQ 472 >UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria RepID=C6M792_NEISI Length = 204 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 51/134 (38%), Positives = 74/134 (55%), Gaps = 4/134 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + P + + GFPSPA Y+ +D N+ LI PSAT+ ++ G SM+D GIS Sbjct: 68 RTTLKVPYALEKIPAGFPSPAEPYIADYLDFNEYLIATPSATFAARSGGYSMLDAGISKD 127 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNS--AYSPITISSEDTL 125 D++I+D + T HGDIV+A + EFT+K+L P +L N+ Y DT Sbjct: 128 DIMIIDRSKTPKHGDIVMADLGNEFTIKRLYKVPGRKPELHSENASGEYPDFVPDESDTW 187 Query: 126 DVFGVVIHVVKAMR 139 + GVV V+K +R Sbjct: 188 TIIGVVTFVIKDVR 201 >UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 Length = 202 Score = 145 bits (366), Expect = 5e-34, Method: Composition-based stats. Identities = 45/130 (34%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R ++ PL V G P A + +E I L L+ A + ++ GDSMID GI D Sbjct: 78 RNVIRLPLVG-KVTAGEPILAVENIEDTITLPYDLVGTEDA-FLLRVKGDSMIDAGIFDN 135 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D++IV A +GDIV+A +D E TVK+ ++L P N A PI + + + Sbjct: 136 DIIIVKRQNVAENGDIVVALIDDEATVKRFFKESDHIRLQPENKAMEPIIVK---DVKIL 192 Query: 129 GVVIHVVKAM 138 G VI +++ M Sbjct: 193 GKVIGLIRRM 202 >UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNT7_FIBSS Length = 217 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + P+ V G P A +E + +++ + S + ++ GDSMI+ GI DG Sbjct: 88 SNTIEIPIVG-RVAAGTPILAVQNLEGTVTIDRDFLACRSDVFALRVKGDSMINAGIFDG 146 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVF 128 DL+ TA G+IV+A +D E TVK V+L P N Y PI +++ + Sbjct: 147 DLIFARQQKTADLGEIVVAQIDNEATVKYYHPSADHVELRPANPKYKPIIVNNRKDFSIA 206 Query: 129 GVVIHVVKAM 138 G VI V++ + Sbjct: 207 GRVIGVMRKV 216 >UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=B3E774_GEOLS Length = 209 Score = 144 bits (365), Expect = 7e-34, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 6/140 (4%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 + ++PA+ V+ P+ +V+ G +PA + ++ ++ + ++ +F++ SGDS Sbjct: 73 IALVRPAN--RSVSLPVVG-VVRAGHLAPAIEDIQGHFAVDPMAVKG-DDCFFLRVSGDS 128 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITI 119 MI+ GI DGDL +V TA + D V+A +DGE T+K R ++L P N PI I Sbjct: 129 MINAGILDGDLAMVRPQQTAGNKDTVVAMIDGEVTLKWFYRERDHIRLQPANPNMEPIII 188 Query: 120 SSED-TLDVFGVVIHVVKAM 138 ED L + G VI V + M Sbjct: 189 RPEDGELSIVGKVIGVYRRM 208 >UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE Length = 215 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 5/130 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + + L +Q+ A + ++ G+SMID GI D Sbjct: 90 REMVDVPVVG-RVTAGQPILAVENITDTFPLPVDFVQNSDA-FMLRIQGESMIDAGILDK 147 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V +A++GDIV+A + E T K + ++L P NS+ PI + D L + Sbjct: 148 DFVLVRQQSSANNGDIVVALIGDEATCKTFYREKDHIRLQPQNSSMEPIVVK--DELSIL 205 Query: 129 GVVIHVVKAM 138 G VI V + M Sbjct: 206 GKVIGVFRRM 215 >UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM9_METSD Length = 161 Score = 143 bits (362), Expect = 1e-33, Method: Composition-based stats. Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 3/128 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + ++ P FS V GF +PA D++E+ ID N LI P+AT ++ GDSMI+ I + D Sbjct: 37 QPLSLPYFSSTVHAGFENPANDHIEEEIDPNGYLIDDPNATILIRVKGDSMIEAEIFEDD 96 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 +LIV+ A GDIV+A +DG FTVK L LIP N Y I L + GV Sbjct: 97 ILIVNRKRRARAGDIVVAELDGGFTVKYLGKHC---LIPANKKYPVIKFQDMQELRLIGV 153 Query: 131 VIHVVKAM 138 V +K Sbjct: 154 VTGKMKRF 161 >UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=LEXA_PELCD Length = 202 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + PL V G P A + + I++ ++ + ++ +GDSMI GI DG Sbjct: 73 ERGMKLPLAG-TVAAGKPIEAIE-IPDVIEVPPTMVGS-GEHFVLRVAGDSMIGDGIIDG 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V TA HG V+A +D E TVK+L R ++L P N + PI ++ D + Sbjct: 130 DYVVVRKQATAEHGQTVVALLDNEATVKRLHRRNDRIELHPANPSMQPIVVTDPDNFRIE 189 Query: 129 GVVIHVVKAMR 139 GVV+ V++ R Sbjct: 190 GVVVGVIRHYR 200 >UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Alphaproteobacteria RepID=B8IDM4_METNO Length = 171 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 1/131 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 AD +V P + GFPS A D+ E ++L + L +P+AT+ + G M GI Sbjct: 11 ADWSGLVRIPFMRTTLCAGFPSSAEDFTEGALELPRWLAPNPAATFIWRVRGWCMKGAGI 70 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 D DL +VD ++ S G +V+A V+GE ++K+L L + L N + + Sbjct: 71 HDQDLAVVDRSLHPSPGAVVVAIVNGEMSLKRLVLDGNRLALTFDNPEMPAFGLEDLEEC 130 Query: 126 DVFGVVIHVVK 136 ++GV++ V+ Sbjct: 131 QIWGVLLFSVR 141 >UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5D0_SLAHD Length = 230 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 74/137 (54%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F+ + +V P+ + V G P A +++ I L ++ S+++ +K GDSMI Sbjct: 98 FVGQGEFSNVVNLPVVGN-VAAGVPILAEQNIQETIPLPTEIVGD-SSSFLLKVRGDSMI 155 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISS 121 + GI+DGD ++V A++GDIV+A V+ TVK+ + R ++L P NS PI + Sbjct: 156 EIGINDGDFVVVKEQPNANNGDIVVALVEDGATVKRFFKERDHIRLQPENSTMEPIIVRE 215 Query: 122 EDTLDVFGVVIHVVKAM 138 + + G V+ V + + Sbjct: 216 --NVSIAGKVVAVFRRL 230 >UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLH8_ANATD Length = 819 Score = 142 bits (360), Expect = 2e-33, Method: Composition-based stats. Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 3/131 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++T L+ + V G P +D ++ L +I P + +K GDSM++ I DG Sbjct: 691 EDVLTINLY-EKVAAGTPVETSDEAIGKVALPTSIISDPERYFAIKVKGDSMVEANIKDG 749 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 D+ IV TA + DIVIA +DGE TVK+ TV LIP NS Y PI I L + Sbjct: 750 DIAIVQKCNTAENRDIVIAWLDGEITVKRFCKMGSTVLLIPENSKYEPINIKEG-ELRIV 808 Query: 129 GVVIHVVKAMR 139 G V+ V++ R Sbjct: 809 GKVVGVIRKKR 819 >UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T1_SALRD Length = 140 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M +PA + P F V+ GFPSPA+DYVE +DL + LI+H +ATY+++ SG S Sbjct: 1 MTAARPARHTPRLRQPFFLTRVEAGFPSPASDYVETELDLAEHLIEHEAATYYLRVSGTS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITI 119 M GI DGD+L+VD A+ + GD+V+AA+D E TVK+L+ R L+P + + PI + Sbjct: 61 MTRAGIHDGDILVVDRAVEPADGDVVVAALDAELTVKRLRTRDGRAFLVPESQHHDPIPV 120 Query: 120 SSEDTL 125 L Sbjct: 121 RDGQEL 126 >UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Arthrobacter RepID=A0K1P5_ARTS2 Length = 143 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 1/119 (0%) Query: 21 LVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITA 80 V G+PSPA DY + RIDLN+ LI+ ++TY V+ SGDSM GISDGD LIV+ A+ Sbjct: 25 PVAAGYPSPAQDYFDGRIDLNEHLIKDITSTYIVRVSGDSMEGAGISDGDELIVNRALDP 84 Query: 81 SHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G +VIA +DGE T+K+L+ V L N Y I + + L ++GV + + Sbjct: 85 KDGSVVIAVLDGELTIKRLRVTASGVVLQADNPRYPDIRVPALSDLVIWGVATRCLHHV 143 >UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHM9_BDEBA Length = 240 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 43/137 (31%), Positives = 79/137 (57%), Gaps = 12/137 (8%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 EI++ PL V G P A + ++ +D+ ++++PS ++ +K GDSMI+ GI D D Sbjct: 107 EILSLPLLG-KVAAGQPIEAIKH-DEFVDVPPSMVRNPSKSFALKVQGDSMIEDGIFDED 164 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---------VQLIPMNSAYSPITISS 121 ++++ +A++GDI++A VD E TVK+ LRP V+L P NS + + Sbjct: 165 IILIQKQNSANNGDIIVATVDNEATVKRFYLRPRPETGDADKMVELRPSNSTMKSMWYTP 224 Query: 122 EDTLDVFGVVIHVVKAM 138 D +++ G+V+ +++ Sbjct: 225 -DEVEIRGIVVGLIRKF 240 >UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR Length = 201 Score = 141 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 75/129 (58%), Gaps = 4/129 (3%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 + P+ +V+ G PA + +E +++ L++ + +F++ GDSMI+ GI GDL Sbjct: 74 ATSIPIVG-VVRAGALQPAIEDIEGYFAVDRALVKG-ADCFFLRVKGDSMIEAGIRSGDL 131 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSE-DTLDVFG 129 +V TA +GDIV+A ++ E T+K+ + + ++L P NSA PI + ++ +++ G Sbjct: 132 ALVRPQATADNGDIVVARINDEATLKRFFREKDRIRLQPENSAMEPIIVKAKAGEVNIIG 191 Query: 130 VVIHVVKAM 138 V + +++ Sbjct: 192 KVTGIFRSL 200 >UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=LEXA_GEOBB Length = 201 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + + P+ +V+ G PA +E +++ + A +F++ GDSM+ I Sbjct: 69 CNQSQAASLPIVG-VVRAGLLHPAIQDIEGHFAIDRSQLASGGA-FFLRVKGDSMVHAHI 126 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISS-EDT 124 +GDL +V AS+ DIV+A VDGE T+K+ ++L P N Y PI I E Sbjct: 127 VEGDLALVRPQPHASNRDIVVAMVDGEATLKRFYREADRIRLQPENPNYEPIIIEKGEQE 186 Query: 125 LDVFGVVIHVVKAM 138 + + G V+ + + M Sbjct: 187 VSIVGKVVGIYRQM 200 >UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEK1_9ACTN Length = 232 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 IVT P+ + V G P A + + I L ++ +++ ++ G+SMI+ GI+D Sbjct: 106 FSNIVTLPVVGN-VAAGQPILAEQNITETIPLPTEIVGD-GSSFLLQVRGESMIEIGIND 163 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V TA +GD+V+A +D TVK R ++L P NSA PI + D + + Sbjct: 164 GDFVVVQEQPTARNGDVVVAIIDDGATVKTYYRERDHIRLQPENSAMEPIIVR--DDVSI 221 Query: 128 FGVVIHVVKAM 138 G V+ + + M Sbjct: 222 AGKVVALFRRM 232 >UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5S2_THIIN Length = 165 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 78/131 (59%), Gaps = 3/131 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + P+ + V GFPSPA D+ + +DLNQLL+++P AT+ +A+G SMI GI DGD Sbjct: 26 PVFRLPMGAARVAMGFPSPAEDFEDDSVDLNQLLVRNPPATFLYRATGWSMIQAGICDGD 85 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKL--QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 +LI+D ++ GD+VIA DG V K+ ++L N +PI +S + +++F Sbjct: 86 VLIMDRSVRPQDGDVVIAVWDGNAPVCKVLHVFDDRIELHSRNPRIAPIVLSPDTEVEIF 145 Query: 129 GVVIHVVKAMR 139 VV V + MR Sbjct: 146 AVV-GVARQMR 155 >UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP Length = 196 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 V PL + G P PA +Y E + L L + ++ G+SM++ GI DGD Sbjct: 72 RAVAVPLLG-RIAAGQPHPAVEYREDVLLLPAELTGS-GECFALRVRGESMVEAGILDGD 129 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 L++V TA +GDIV A V GE TVK+ ++L P N PI D + G Sbjct: 130 LVVVRRQPTAENGDIVAALVAGEATVKRFYREDGRIRLQPENRTMRPIF---TDEAAILG 186 Query: 130 VVIHVVKA 137 V+ +++ Sbjct: 187 KVVALIRK 194 >UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEXA_ACIC1 Length = 275 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 6/129 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 ++V PL + G P+ A +E + L + L+ + ++ GDSM+D I DGD Sbjct: 152 DVVAVPLVG-RIAAGGPALAEQLIEDVVPLPRQLVGE-GTLFLLQVKGDSMVDAAICDGD 209 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFG 129 ++V A +GDIV A +DGE TVK + R + L+P N Y PI D + G Sbjct: 210 WVVVRQQPVAENGDIVAAMIDGEATVKTFKRRGAHIWLMPHNPQYEPI---PGDEATILG 266 Query: 130 VVIHVVKAM 138 V+ V++ + Sbjct: 267 RVVAVLRRL 275 >UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Chlorobium/Pelodictyon group RepID=Q3B450_PELLD Length = 245 Score = 138 bits (348), Expect = 5e-32, Method: Composition-based stats. Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 2/132 (1%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +V PL+S V G P+ AAD VE +D + + Y + SGDSM+D GI G Sbjct: 114 EAVVQVPLYSSAVPAGMPAAAADEVECSVDFPRSWTKGKKNIYALTVSGDSMMDIGIMPG 173 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDV 127 D L+V++ TA G +VIA+++ E TVK L + V L P N Y PI + + + Sbjct: 174 DTLLVEARETARDGQVVIASLNSEVTVKTLCISAGGAVALAPENRKYHPIPVPPDSDFRI 233 Query: 128 FGVVIHVVKAMR 139 GVV+ V+ R Sbjct: 234 MGVVLAAVRQYR 245 >UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_ANADF Length = 231 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 +KPA +V P+ V G P A + VE + ++ L+ Y ++ GDSMI Sbjct: 96 LKPA--GRLVEIPILG-RVAAGQPILAQERVEDTVQVDSFLLGTNKKVYGLRVQGDSMIG 152 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI GD + V + A GDIV+A +D E TVK++ V+ P N +PI + Sbjct: 153 DGILPGDYIFVKKQLHAEDGDIVVAMIDEEATVKRVYFEGDRVRFQPSNPRMAPIYVRGS 212 Query: 123 D--TLDVFGVVIHVVKAM 138 D T + GVV+ V + + Sbjct: 213 DFRTTMILGVVVGVYRKL 230 >UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0C8_9CLOT Length = 487 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 3/130 (2%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 E+ P++SD + G P +E + ++ + +K GDSMI I + Sbjct: 359 EEELKKLPVYSD-IAAGEPILMNPEIEDVFYVPTYWLKGMKDCFILKVRGDSMIGADIDN 417 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 GD +I+ TA + DIV +DG T+K+ + + L+P N Y PI I+ E + Sbjct: 418 GDYVIIKKQYTAQNKDIVAVNLDGNATLKRFVNKKEGIYLMPENKKYEPIRINDEGA-RI 476 Query: 128 FGVVIHVVKA 137 GV + ++K Sbjct: 477 IGVAVGIIKE 486 >UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_9BACT Length = 216 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 4/140 (2%) Query: 4 IKPADLREIVTFPLFSD-LVQCGFPSPAA-DYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 I PA +T P F + V GFP D Q +D+ ++L +P A+Y +K GDSM Sbjct: 76 IYPATSVRSMTLPKFDNARVVAGFPLALDTDEQAQSVDILRMLCPNPEASYLIKVRGDSM 135 Query: 62 IDGGISDGDLLIVDSAI-TASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITI 119 ID GISDGD++IVD + T S ++ + +GE+T+K + Q L+P N Y I I Sbjct: 136 IDAGISDGDIIIVDKSNRTPSEHEVAVCEYNGEYTIKHIVQQAGKTWLVPANPKYPRIEI 195 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 ED V+GVV + + R Sbjct: 196 FEEDDFSVWGVVTYTIHKPR 215 >UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I60_CLOAB Length = 480 Score = 138 bits (348), Expect = 6e-32, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 2/130 (1%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 EI P+F++ + G P +E + L + ++ + +K GDSMI+ I+D Sbjct: 351 ENEIEKIPIFNE-IAAGEPILINSQIEDKFYLPRYWVKDAKNCFILKIKGDSMINADIND 409 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDV 127 GD +++ A + DIV +DG T+K+L++ + + +P N YSPI ++ ++ + + Sbjct: 410 GDCVVIKKTGAAENRDIVAVNIDGSATLKRLKMDKDGIAFMPENELYSPIKVTEDEQVML 469 Query: 128 FGVVIHVVKA 137 G+ + V+K+ Sbjct: 470 IGIAVGVLKS 479 >UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12_DICT6 Length = 199 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 6/139 (4%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 ++K E++ PL ++ G P + +Y+E+ I + + ++ P ++ +K GDSM Sbjct: 66 FYLKNLINEEVIYLPLIG-TIRAGIPVESPEYIEEYIPVPKNFVKIPEKSFLLKVRGDSM 124 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITIS 120 I DGDL+IV TA G+IV+A DGE TVK L + L P N YS I Sbjct: 125 EGAHILDGDLIIVQKQDTAQKGEIVVALKDGESTVKFLSENYGIPCLKPANPRYSEIYPP 184 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + G V+ V++ + Sbjct: 185 ----FKIIGKVVGVIRLFK 199 >UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWK1_CLOB8 Length = 512 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + ++V P+F++ + G P +Y+E L + I+ + +K GDSMI+ I D Sbjct: 384 VDDVVNIPVFNE-IAAGNPILINEYIEDSYSLPKDWIRTSKDVFMLKVKGDSMINKNIYD 442 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDV 127 GD +++ DIV ++GE T+K + + + LIP N Y PI I + +V Sbjct: 443 GDYVVISKQNMPRIKDIVAVDIEGEATLKTYKVIDGKIALIPENDKYQPIII-EDQQFNV 501 Query: 128 FGVVIHVVKA 137 GV I ++K Sbjct: 502 LGVAIGLIKN 511 >UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TFZ8_HELMI Length = 260 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + PL + V G P AA+YVE + + + ++ + ++ GDSMID GI GD Sbjct: 136 PFLQVPLLGN-VAAGSPILAAEYVEDYLPIAKSMLGE-GEFFGLRVKGDSMIDAGILHGD 193 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 +IV AS+G IV+A +D + TVK+ V+L P NSA PI + L + G Sbjct: 194 TVIVRRQAHASNGQIVVALIDDDATVKRFFKEADHVRLQPENSALEPIRVR---DLSILG 250 Query: 130 VVIHVVKAMR 139 V+ V++ + Sbjct: 251 KVVMVLRNVH 260 >UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9V2_9FIRM Length = 214 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 44/131 (33%), Positives = 68/131 (51%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E+V PL V G P A +++E + L+ + + GDSM D GI D Sbjct: 87 KEVVGVPLVG-AVHAGDPILADEHIEDMYPIPTELLGTKDDVFMMVVEGDSMKDAGILDR 145 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A +GDIV+A ++G E T+K+ ++L+P NSAYSPI D + + Sbjct: 146 DYVFVRRQDYAQNGDIVVALLNGEETTIKRYFRELKQIRLVPENSAYSPIV--GTDNIKI 203 Query: 128 FGVVIHVVKAM 138 GVV+ V + + Sbjct: 204 TGVVVGVFRVL 214 >UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_VEIPT Length = 223 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL VQ G P A + +E + L L S + ++ G+SM++ G+ +GD+LIV Sbjct: 103 VPLIG-TVQAGMPITAVENLESTLTLPVQLTGD-SDCFLLRVQGESMMNIGMYEGDMLIV 160 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 TA++GD+V+A +D E TVK+ ++L P N + PI + D + G+VI Sbjct: 161 RHQNTANNGDVVVARIDDEATVKRFYKENGHIRLQPENDDFDPIIV---DDCHIEGLVIG 217 Query: 134 VVKA 137 +V+ Sbjct: 218 LVRD 221 >UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD Length = 217 Score = 136 bits (344), Expect = 2e-31, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL V G P A VE+ + L ++ S+++ ++ G+SMI+ GI DG Sbjct: 92 NNVISLPLVG-RVAAGTPILAEQNVEESLSLPTSIVGD-SSSFILRVRGESMINAGIFDG 149 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V A G+IV+A +D TVK ++L P N PI + + + Sbjct: 150 DYIVVKEQQDAHDGEIVVALIDDSATVKTFYRENDRIRLQPENDFMEPIYVKNP---VIL 206 Query: 129 GVVIHVVKAM 138 G V +++++ Sbjct: 207 GRVTALIRSI 216 >UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXW1_9BACT Length = 209 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 3/128 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +V P+ V G P + + + + ++ + +F+K G+SM I DG Sbjct: 77 SSLVEVPILGQ-VAAGLPILSEENLSGHLSVDPAWV-RKGPVFFLKVHGESMKGAAILDG 134 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 D ++V TA +G IV+A +DGE TVK+L+ R + L+P N + I + E + + Sbjct: 135 DYVLVRQQETADNGQIVVATIDGETTVKRLRQRGDQLSLLPENPDFPEIPVRKEGSFRII 194 Query: 129 GVVIHVVK 136 G+V+ V + Sbjct: 195 GLVVGVFR 202 >UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1S3_9PROT Length = 198 Score = 136 bits (343), Expect = 2e-31, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 3/131 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R+ PL VQ G P + + ++++L+ PS T + GDSMID GI +G Sbjct: 70 RQFFARPLAEATVQAGMPVAVNETHGEYFVIDEMLVDKPSTTTMITVKGDSMIDAGIHEG 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D+ +V+ A+ GDIV+A VD EFT+K L + R L P N AY I + TL++F Sbjct: 130 DVAVVEKRHVANIGDIVVAIVDNEFTLKTLDKERGQYILRPANPAYP--VIRPQGTLEIF 187 Query: 129 GVVIHVVKAMR 139 GV++ +++ R Sbjct: 188 GVLVGLIRKYR 198 >UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLR5_YERE8 Length = 137 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 79/123 (64%), Gaps = 2/123 (1%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 F + F + A DY+E+RID+N+ I HP+AT+F+ A G+S+I GI G LL++D + Sbjct: 16 FGGPMSA-FGNAAQDYIEKRIDINEHCIVHPAATFFMTAEGESLIAAGIHHGALLVIDRS 74 Query: 78 ITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDT-LDVFGVVIHVVK 136 + A HGDIV+A + GEF++K+L LRPT +L +N+ + + D L +FGV+ + Sbjct: 75 LPAKHGDIVVATIGGEFSIKRLYLRPTPRLEALNAGTPALILCEGDEDLVIFGVITFCIN 134 Query: 137 AMR 139 +R Sbjct: 135 KLR 137 >UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQX0_BACS4 Length = 808 Score = 136 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + PL + V G P+ A + E I L I P+ T+ + +GDSMI GI Sbjct: 680 VEYETKTRVPLIGN-VAAGVPTTAEEQYESVIVLPNDWIASPNDTFALTVTGDSMIGAGI 738 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTL 125 GD +IV+ AS+GDIVIA ++ E T+KK + +V LI NS+Y PI + ED L Sbjct: 739 DKGDQVIVNRQNVASNGDIVIAIIEEEATMKKFMLMGDSVLLISENSSYEPIQMKREDVL 798 Query: 126 DVFGVVIHVVK 136 + G VI V+K Sbjct: 799 -INGKVIGVLK 808 >UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEXA_POLSJ Length = 234 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F P + PL V G P A +++EQ L Q Y +K G SM Sbjct: 97 FSLPLQSLAQLALPLVG-RVAAGSPILAQEHIEQTYYFESSLFQRQP-DYLLKVRGMSMR 154 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISS 121 D GI DGDLL V A A +G IV+A + E TVK+ + ++L+P N + I + Sbjct: 155 DAGIIDGDLLAVKQAKEARNGQIVVARIGDEVTVKRFRRTKHLIELLPENPDFKTIVVEP 214 Query: 122 EDTLDVFGVVIHVVKA 137 + ++ G+ + +++ Sbjct: 215 GEPFELEGLAVGLIRN 230 >UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I583_THIIN Length = 243 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 71/128 (55%), Gaps = 5/128 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQ-LLIQHPSATYFVKASGDSMIDGGISDG 69 E + PL V G P A +++EQ ++++ P Y +K G SM D GI DG Sbjct: 115 EQLCLPLVG-RVAAGHPILAQEHIEQTLNVDPGAFSVRPD--YLLKVRGMSMRDAGILDG 171 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D+L V S+ TA G IV+A + E TVK+L+L+ ++L+P N ++PI + + + Sbjct: 172 DMLAVKSSQTAQSGQIVVARIGDEVTVKRLRLQADHIELLPANPEFAPIRVDASQPFAIE 231 Query: 129 GVVIHVVK 136 G+ + +++ Sbjct: 232 GLAVGLLR 239 >UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X801_OXAFO Length = 140 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +L + +T + GFP P D +DLN L+ +P +++ + GDSM GI Sbjct: 7 PELSDSITRNRIENTSVAGFPIPHTDSANTMVDLNAQLLVNPCSSFLFRMKGDSMEGIGI 66 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 +GD ++VD +I H IV+ D E+ V++L R V+L+P N Y P+ ++ L Sbjct: 67 YEGDTIVVDRSIDPQHNHIVLGVADQEYLVRRLYKRGRTVRLMPENEKYRPLELTEGREL 126 Query: 126 DVFGVVIHVVKAM 138 ++GVV ++ + Sbjct: 127 QIWGVVTASIRKL 139 >UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum RepID=C4IFP8_CLOBU Length = 563 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + E+VT P+F++ + G P D VE ++ + I+ + +K GDSM+ I+D Sbjct: 433 VEEVVTIPVFNE-IAAGSPILMNDEVEYSCNIPKSWIRGTKDLFILKIKGDSMVKKNIND 491 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 GD ++++ D+V ++GE T+K + + V L P N Y PI ++ E + Sbjct: 492 GDHVLINKNKYPCANDVVAVEIEGEATLKTFKTKGKYVILKPENDKYDPIILNGEQEYSI 551 Query: 128 FGVVIHVVKAM 138 GV + ++K Sbjct: 552 LGVAVGILKNF 562 >UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor n=6 Tax=Bacteria RepID=Q4PJ96_9BACT Length = 131 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 +T P + GFPSPA DY+E+ IDLN LI++ AT+ ++ G SM++ GI DGDLL Sbjct: 3 LTIPYYLHKAGAGFPSPATDYIEEDIDLNVHLIKNVPATFIIRVQGKSMVNAGIYDGDLL 62 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSP-ITISSEDTLDVFGV 130 +VD ++ + VIA V E VK + + L + + I I+ E + V+GV Sbjct: 63 VVDKSLKPKNFSTVIANVHDELVVKNFVKEKDRQFLTSGSKKFEDRILINEEADVFVWGV 122 Query: 131 VIHVVKAM 138 V +V+ ++ Sbjct: 123 VTYVIHSV 130 >UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G107_9DELT Length = 207 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 6/132 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA--TYFVKASGDSMIDGGISDGD 70 V+ P+ V G P A + + R+ +++ + + + + GDSMI+ GI DGD Sbjct: 77 VSIPILGQ-VAAGQPILAQENISDRVTIDRFFVGKAPSKEVFGLVIRGDSMIEDGIYDGD 135 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSED--TLDV 127 + V TA +G+I + ++GE T K+ V+L P N +PI + + +DV Sbjct: 136 YIFVRKQSTAENGEIAVVMIEGEATCKRVFHEGDRVRLQPANETMAPIYVHRSEFRAIDV 195 Query: 128 FGVVIHVVKAMR 139 G V+ V + + Sbjct: 196 IGKVVGVYRKLH 207 >UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWQ9_9PROT Length = 194 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 4/133 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + PL GFPSPA + + I ++ L++HPSAT V+ GDSMI GI Sbjct: 63 VPTSKFLERPLVGS-APAGFPSPAEEALGDAISIDDYLVEHPSATVLVQVDGDSMIGAGI 121 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTL 125 + GD++IV I++A VDG+FT+K L+ + L P N AY I ++ L Sbjct: 122 NSGDIMIVRRESRPRVDRIIVAIVDGDFTIKYLRKDKQGYFLEPANPAYP--IIRPDNDL 179 Query: 126 DVFGVVIHVVKAM 138 ++GVV+ + Sbjct: 180 QMYGVVVGQFRKY 192 >UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7_STRCL Length = 240 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + +P + PL ++ G P A +E L + L+ + +K +G+SMI Sbjct: 108 YEQPENQNAATEVPLVG-RIEAGAPVLAEQMIEDTYLLPRQLVGE-GELFALKVTGESMI 165 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITIS 120 + I DGD++ V A GDIV A +DGE TVK+ Q L+ N + P+ Sbjct: 166 EAAICDGDVVTVRRQQVAQPGDIVAAMLDGEATVKRFQRDAAGHAWLVAHNPRFQPL--- 222 Query: 121 SEDTLDVFGVVIHVVKAM 138 + D + G V+ V++A+ Sbjct: 223 AADHAVILGKVVAVIRAL 240 >UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=C6X823_METSD Length = 196 Score = 134 bits (338), Expect = 9e-31, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 3/123 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L VQ GFPS A+ + ++ LI+ PS T + GDSMID GI D++IV+ Sbjct: 75 LAESTVQAGFPSAASGDRHDTLSIDDYLIERPSQTVLITVKGDSMIDAGIVPDDVVIVEK 134 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ GDIV+A VD EFT+K L + + L+P N AY I + L++FGVV+ Sbjct: 135 RQVANVGDIVVAIVDNEFTLKTLGREKGQFVLLPANKAYP--VIRPQGNLEIFGVVVGQF 192 Query: 136 KAM 138 + Sbjct: 193 RKY 195 >UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 RepID=C2KVZ7_9FIRM Length = 235 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++E+V+ P+ V G P A + V L ++ + T+ +K GDSMI+ GI D Sbjct: 109 MKEMVSVPVIG-TVAAGTPIFAEENVSDHFPLPTEILPN-QETFILKVKGDSMINVGIFD 166 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 GD L+V T S G++V+A V+ TVK+ ++L P N I ++ + Sbjct: 167 GDYLMVAKQNTCSDGEVVVALVEDSATVKRFYKEKGYIRLQPENDTMEDIIVN---DCQI 223 Query: 128 FGVVIHVVK 136 G I +++ Sbjct: 224 LGKAIGLIR 232 >UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTL1_CHLT3 Length = 270 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+F V G ++ +E+ I L +L++HP +Y V+ASG+SM+ GI GDL Sbjct: 142 MVEIPVFMHRVSAGPAVASSSEIEEYIKLPTVLLKHPKRSYAVRASGNSMVGAGIHSGDL 201 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 LIVD H IVIA+++GE TVK+L + + L P NS Y I+ E + GV Sbjct: 202 LIVDQEAAIKHKCIVIASINGEQTVKRLLIEDGELVLAPENSHYQSTPITKEMNFSILGV 261 Query: 131 VIHVVK 136 V+H+++ Sbjct: 262 VMHIIR 267 >UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0SJ79_RHOSR Length = 247 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT P+ D + G P A ++ ++ + L + L+ + ++ G+SMID I DGD++ Sbjct: 126 VTVPVVGD-IAAGAPILAEEHADEMLTLPRELVGS-GTVFGLRVRGESMIDAAICDGDVV 183 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V A G+IV A +DGE TVK L+ R V L P N AY+ I D V G V Sbjct: 184 VVRRQDEAHSGEIVAAMIDGEATVKVLRRRDGHVFLEPRNPAYAVI---DGDDAVVLGKV 240 Query: 132 IHVVKAM 138 + V++ + Sbjct: 241 VSVMRRI 247 >UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232_CLOBH Length = 535 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E+ P+F+D + G P VE ++ + ++ + +K GDSMI I DGD Sbjct: 409 ELTKLPVFND-IAAGEPILMNPCVEGEFNIPKYWVRGMKNCFILKVKGDSMIGANIEDGD 467 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFG 129 +++ A + DIV +DG T+K+ L + L+P N Y PI I E + G Sbjct: 468 HVVIKRQQMAENKDIVAVNLDGSATLKRLLIKKSGAVLMPENKKYKPIEILEEGA-SIIG 526 Query: 130 VVIHVVK 136 + + ++K Sbjct: 527 IAVGIIK 533 >UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S24 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT3_CHRSD Length = 146 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 3/136 (2%) Query: 5 KPADLREIVTFPLFSDLVQ-CGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 PA + PL + GFPSPA DYV + +DLN+ L++ P+AT+F+ +GDSM+D Sbjct: 10 HPAPPYRALPHPLVTIRAGISGFPSPAEDYVGRTLDLNERLVKRPAATFFMTVAGDSMVD 69 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI DGD L+VD +I A G IV+A VDGE VK+ ++ L N Y+PI +++ Sbjct: 70 FGIQDGDTLVVDRSIDAKPGHIVVALVDGEVIVKRYEIIGRRPYLCSGNFQYAPIPLANI 129 Query: 123 DTLDVFGVVIHVVKAM 138 V+GVV V+ Sbjct: 130 -ECQVWGVVRSVIHEF 144 >UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D1VBC2_9ACTO Length = 278 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + G P A VE + L + ++ + ++ G+SMI+ I DGDL+ V Sbjct: 158 LPLVG-RIAAGGPILAEQAVEDVLPLPREIVGE-GTLFLLRVVGESMINAAICDGDLVAV 215 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +G+IV A +DGE TVK+ + V L P N A+ I + D + G V+ Sbjct: 216 RQQPVAENGEIVAAMIDGEATVKRFRRHDDGHVWLQPENPAFHDI---AGDDATILGRVV 272 Query: 133 HVVKAM 138 V++ + Sbjct: 273 AVMRRV 278 >UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 RepID=LEXA_MAGSM Length = 231 Score = 132 bits (334), Expect = 2e-30, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 K D+ +V P+ + V G P A + + ++ + P + +K GDSMID Sbjct: 93 EKKPDVARLVPVPIIGE-VAAGIPILAVENHIGELLMDSRTARGP--CFALKVKGDSMID 149 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSE 122 I +GD ++V A +GDIV+A +DGE TVK+L + T++L P N +Y PI + Sbjct: 150 AEIFEGDYVVVRHQALAENGDIVVAILDGEATVKRLYISEETIELRPENRSYQPIVVPPG 209 Query: 123 DTLDVFGVVIHV 134 + + G V+ V Sbjct: 210 GDIRILGKVLAV 221 >UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=LEXA_DESAA Length = 203 Score = 132 bits (333), Expect = 3e-30, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + G P A + V +D+++ A + V+ GDSMI+ I DGD ++ Sbjct: 78 KIPLVG-RIAAGAPILAVENVMDTLDVDRAFFGSSDA-FSVRVEGDSMIEAHIEDGDYVV 135 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED--TLDVFGV 130 + T +GDIV A V+ E T+K ++L P N Y P + ED + V GV Sbjct: 136 IKPTATPRNGDIVAALVNDEVTLKYFHRDGSRIELRPANVRYKPFCYTEEDFIDVRVLGV 195 Query: 131 VIHVVKAM 138 + +++ + Sbjct: 196 MAGLIRKV 203 >UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA_THENN Length = 207 Score = 132 bits (333), Expect = 4e-30, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + ++ G A +Y+E I++ + + ++ G+SMI+ I DGDL++ Sbjct: 74 RVPLIGE-IRAGEKKEAIEYLEDYIEVPGSFLSSGYEHFLLRVKGESMIEEHICDGDLVL 132 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 + A +GDIV A V+GE T+KK R V+L P N SP+ + D + + G V+ Sbjct: 133 IRRQDWAQNGDIVAAMVEGEVTLKKFFQRGEMVELRPANKEMSPMFFRA-DRVKILGKVV 191 Query: 133 HVVKAM 138 V + Sbjct: 192 GVFRKY 197 >UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID=D0YVD4_9ACTO Length = 278 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 AD + PL + G P A + VE L + + ++ +G+SM D I Sbjct: 151 ADTADSNAIPLVG-RIAAGTPITAEELVEDTFMLPRRFTG-AGELFMLEVNGESMRDAAI 208 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTL 125 +GD ++V + A +GDIV A ++GE TVK+ + + V L+P N ++ PI D Sbjct: 209 MNGDWVVVRAQNEARNGDIVAAMLEGEATVKEFSRDKGHVWLLPHNPSFEPI---PGDGA 265 Query: 126 DVFGVVIHVVKAM 138 + G V+ V++A+ Sbjct: 266 TILGKVVTVIRAL 278 >UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7U7_NATTJ Length = 815 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 74/130 (56%), Gaps = 3/130 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 ++ E V ++ +L G A ++ ++L + ++ +P + ++ +GDSMI+ GI Sbjct: 687 EVSEYVKLNVYGEL-TAGELKYAHQDIQGDVELPKEIVPNPDNCFMLEVTGDSMINAGID 745 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLD 126 GD +IV A + DIV+A +D E T+KK ++ T+ L+P N Y PI +S ED L Sbjct: 746 KGDYVIVQKQNYAENLDIVVAVIDQEATLKKYSRMGDTILLMPENKNYEPIIVSEED-LI 804 Query: 127 VFGVVIHVVK 136 + G VI V+K Sbjct: 805 INGKVIGVLK 814 >UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B6FPF9_9CLOT Length = 200 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 7/124 (5%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 V CG P +Y+E+ + L L + ++ASGDSMI GI+ GD++++ Sbjct: 80 VLGSVSCGMPQLEEEYIEEYVSLPVSLFGE-GEFFILRASGDSMIGAGINSGDMIVIRKQ 138 Query: 78 ITASHGDIVIAAVDGEFTVKKLQL---RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 TAS GDIV+A VD E T+K+ L R V+L P N Y I V GV +HV Sbjct: 139 NTASDGDIVVALVDNESTLKRFFLDTERRCVRLHPENPKYPDIY---TQNCTVQGVAVHV 195 Query: 135 VKAM 138 +K++ Sbjct: 196 IKSL 199 >UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=LEXA_SYNFM Length = 206 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 5/129 (3%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 V+ P +V G P A + + + +++ + + + + + ++ GDSMI+ GI +GD+ Sbjct: 75 AVSIPFLG-VVAAGTPIEAVE-IPESVEVPESFLANGNN-FALRVKGDSMIEEGIREGDI 131 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGV 130 LIV A +G V+A V GE TVKK R ++L P NS PI + D ++V G Sbjct: 132 LIVARQSRAENGQTVVALVQGEATVKKFYQRGEEIELRPANSRMQPIHARA-DAVEVVGT 190 Query: 131 VIHVVKAMR 139 V+ +++ R Sbjct: 191 VVGLLRNYR 199 >UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0IYW8_COMTE Length = 136 Score = 131 bits (329), Expect = 9e-30, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT PL + G SPA D+ +R+D+ LL+ HP AT+ ++ +G SM + GI DGD++ Sbjct: 10 VTLPLADRSARAG--SPANDFAGKRLDITDLLVTHPKATFLLRVAGPSMQEHGIDDGDIV 67 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD + A G IV+A V+ E ++ L T +L Y I TL+++GVV Sbjct: 68 VVDRELRARDGSIVVAVVERELVIRALDSDGDTCKLRAGAPTYPDIVPPEGQTLEIWGVV 127 Query: 132 IHVVKAM 138 +K Sbjct: 128 TSCIKRF 134 >UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9FIRM Length = 205 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 6/128 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + +E + + + T+F+K G+SMI+ GI DG Sbjct: 80 REMVHVPIIGQ-VAAGEPILAQENIEDYWPVPADRMPN-KQTFFLKVKGESMINAGILDG 137 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVF 128 D+++V+ TAS+GD+V+A ++ TVK V +L P N PI + + + + Sbjct: 138 DMVLVEEDSTASNGDMVVALIEDGATVKTFYKEEGVFRLQPENDFMDPIIVKN---VTIL 194 Query: 129 GVVIHVVK 136 G VI V++ Sbjct: 195 GKVIAVMR 202 >UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LEXA_BIFAA Length = 257 Score = 131 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 6/125 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + G P A +V+ + L + L + ++ GDSMID I DGD ++V Sbjct: 138 VPLVG-RIAAGVPITAEQHVDDVMRLPERLTGT-GNLFMLEVHGDSMIDAAICDGDFVVV 195 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 +A +GDIV A +D E TVK + V LIP N AYSPI ++ G V+ Sbjct: 196 REQNSAENGDIVAALLDDEATVKTFRKDHGHVWLIPHNPAYSPI---DGTHAEIMGKVVT 252 Query: 134 VVKAM 138 V++ + Sbjct: 253 VLRKI 257 >UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID=B8GQJ6_THISH Length = 154 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 10/140 (7%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 P D E PL V G P E+R+ + +++ TY ++ G SM Sbjct: 23 FEAAPVDTCE---IPLLG-WVAAGLPVDLCSN-EERVSVPAHMVRR--NTYALRVRGHSM 75 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQ-LRPTVQLIPMNSAYSPITI 119 ID I DGD+++V+ +A +G V+A ++GE T+KK R ++L P N PI + Sbjct: 76 IDDNIQDGDIIVVERRQSAENGQTVVAMINGEQVTLKKFYVEREGIRLQPANPDMEPIIL 135 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 +E +++ G+V V++ MR Sbjct: 136 RNE-EIEILGIVTGVIRDMR 154 >UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LEXA_ALCBS Length = 204 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 4/125 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ V G P A + VE+ + + Q L + TY +K GDSM+D GI DGDL+ Sbjct: 79 ELPVVG-KVAAGIPIEAIENVERTVPVPQGLFKQRP-TYLLKVQGDSMVDAGIFDGDLIA 136 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 V + A G+IV+A +D E TVK L+L + L+P N AY PI + D L + G+ + Sbjct: 137 VRKSNVARSGEIVVARIDEEVTVKTLKLNKSSATLLPANEAYEPIKV-PADQLIIEGIFV 195 Query: 133 HVVKA 137 +++ Sbjct: 196 GLIRD 200 >UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJY0_ACIFE Length = 215 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + +V PL V G P A + +E + LI + + GDSM + GI D Sbjct: 88 KSMVPVPLVG-AVHAGDPMLAVENIEDTYPIPLDLIGCSEDVFMMVVEGDSMKNAGILDH 146 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A++GDIV+A +G E T+K+ ++L P N AY PI D +++ Sbjct: 147 DYVFVRKQNYATNGDIVVALFNGEETTIKRYFRELKQIRLQPENDAYPPIV--GTDNIEI 204 Query: 128 FGVVIHVVKAM 138 G VI V + + Sbjct: 205 KGKVIAVFRTL 215 >UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae RepID=D2TWH9_9ENTR Length = 213 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 4/132 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E PL V G P A +++E ++ I PSA + ++ +G SM + GI Sbjct: 80 EENEDEGLPLIG-RVAAGEPLLAQEHIESHYRIDAT-IFRPSADFLLRVNGMSMKNIGII 137 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS-SEDTL 125 DGDLL V +G IV+A +D E TVK+ + + V+LI N + PI + L Sbjct: 138 DGDLLAVHKTQQVHNGQIVVARIDDEVTVKRFKQAGSKVELIAENPEFEPIIVDLRTQNL 197 Query: 126 DVFGVVIHVVKA 137 + G+ + +++ Sbjct: 198 TIEGLAVGIIRN 209 >UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM Length = 214 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 E+++ PL + V G P A + ++++ L + + + + GDSMI+ GI G Sbjct: 90 EELISIPLLGE-VAAGVPLLAVENYDEKVTLPRSFTGY-GEFFMLSVRGDSMIEAGILPG 147 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 DL++V + S+GDI +A ++ E TVK+ + ++L P NS SPI + + + Sbjct: 148 DLVLVRRQESVSNGDIAVALLEDEATVKRFYKEKNRIRLQPENSLLSPIYV---QEVKIL 204 Query: 129 GVVIHVVKAM 138 G V+ +++ + Sbjct: 205 GKVVGLMRKI 214 >UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS26_DESOH Length = 210 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + P+ + G P A E + L++ + ++ GDSM D I Sbjct: 76 AGMHRWREIPVIG-AITAGLPMYAQQEWEGTLVLDRSCFPG-DNLFALRVKGDSMKDAAI 133 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 DGDL+I + A +G+IV+A V+G E TVK+ R ++L P N AY+P+ + D Sbjct: 134 LDGDLVICEPRQFAENGEIVVALVNGEEATVKRFFKRQDHIELKPENPAYAPLKLMFGDV 193 Query: 125 LDVFGVVIHVVKA 137 L + G VI + + Sbjct: 194 L-IQGKVIGLHRD 205 >UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMQ6_GLOVI Length = 191 Score = 129 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 42/111 (37%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 11 EIVTFPLFSDLVQCGFPSPAA-DYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL + V G P D + R+ L++ L++ + T+ ++ GDSMI+ GI +G Sbjct: 64 DLLGIPLLENRVPAGSPVTVEEDLLNSRMSLDEYLVEERTGTFLLRVKGDSMIEAGIFEG 123 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITI 119 D+++V+ A+ GD+VIA VDGE T+K L+ R L P NS YSPI Sbjct: 124 DIVVVNQNRRAADGDVVIARVDGEMTLKTLRRRNQQTWLEPANSRYSPIHP 174 >UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID=LEXA_DESDG Length = 207 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+ V G P A + + + L + + + + GDSMID GI+DGDL Sbjct: 83 LVAVPIVG-TVAAGHPIFAHENITGEV-LVEASVVGSGKCFALYTQGDSMIDAGINDGDL 140 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 +IV A GDIVIA +D E TVK+L++ ++L+P N PI + ED L + G Sbjct: 141 IIVRRQPIAEDGDIVIALLDDEATVKRLKIDNELIELVPENPRLKPIRVKPEDELRILGK 200 Query: 131 VIH 133 V+ Sbjct: 201 VVG 203 >UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERE0_9BACT Length = 205 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 7/129 (5%) Query: 11 EIVTFPLFSDLVQCGF--PSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 V P+ V G SP D+ + L + PS +F++ GDSM D I D Sbjct: 77 NAVPVPVLG-RVAAGSLRESP-EDHTKTWFVDPDWLPEGPS--FFLRVRGDSMKDAAILD 132 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V S A GDIV+A +DGE TVK+L + + L P NSAY I I ++ + Sbjct: 133 GDYVLVSSRPDAKPGDIVVAMIDGESTVKRLSRKGDRLVLSPENSAYPDIPIPTDTDFRI 192 Query: 128 FGVVIHVVK 136 GVV+ V++ Sbjct: 193 TGVVVGVIR 201 >UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSV5_9BIFI Length = 263 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 L + PL + G P A +VE + L L + ++ GDSM+D I D Sbjct: 138 LENSMDVPLVGS-IAAGTPITAEQHVEDVMRLPVRLTGT-GKLFMLEVHGDSMVDAAICD 195 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V TA +GDIV A + E TVK + + L+P N +YSPI + Sbjct: 196 GDFVVVREQHTADNGDIVAALLGDEATVKTFRNEDGHIWLMPHNPSYSPI---DGTHAQI 252 Query: 128 FGVVIHVVKAM 138 G V+ V++ + Sbjct: 253 MGKVVTVLRRL 263 >UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T6T4_BURPP Length = 199 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 5/134 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A R P+ V+ G P P + + ++ L+ P+ T + G+SM D G+ Sbjct: 67 APTRRFFGRPVLG-AVRAGQPQPEGQEPPELLTIDDYLVDDPNRTVLCRVRGESMRDVGL 125 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVK--KLQLRPTVQLIPMNSAYSPITISSEDT 124 DGDL++V+ GDIV+A VDGE TVK +L L P N + I + + Sbjct: 126 LDGDLVVVEKNRPTRPGDIVVAVVDGEMTVKTLRLDKNGAYYLEPANQDFQ--VIRPQGS 183 Query: 125 LDVFGVVIHVVKAM 138 L++ GVV+ V+ Sbjct: 184 LEIVGVVVGSVRKY 197 >UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN Length = 250 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 6/125 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + G P A +E L + ++ + +K G SMI+ I DGD ++V Sbjct: 131 VPLVG-RIAAGGPILAEQAIEDVYPLPKEIVGE-GTLFLLKVVGQSMINAAICDGDFVVV 188 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 A +G+IV A +DGE TVK+ + R V L P N A+S I + + G ++ Sbjct: 189 RQQPVADNGEIVAAMIDGEATVKRFRQRDGRVWLAPENPAFSDI---PAEDATILGRIVA 245 Query: 134 VVKAM 138 V++ + Sbjct: 246 VMRRV 250 >UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0D8_METFK Length = 194 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 3/123 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 + VQ GF +PA + ++ LI+ PS T + GDSM D GI DGD++IV+ Sbjct: 73 IAESTVQAGFATPAYGDSLDTMGIDDYLIEKPSQTILITVRGDSMKDAGIFDGDVVIVEK 132 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ GDIV+A ++ EFT+K L LIP N + I E ++FGVV+ Sbjct: 133 RPFANVGDIVVAILNKEFTLKTLGKEGNQFVLIPANKDFP--VIRPEGDFEIFGVVVGQF 190 Query: 136 KAM 138 + Sbjct: 191 RKY 193 >UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) RepID=LEXA_CORJK Length = 267 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + E P+ + G P A VE L Q L+ + + ++ G+SM D GI + Sbjct: 142 MPEATYVPVVGQ-IAAGAPILAEQNVEAHFPLPQELVGN-GELFLLQVVGESMHDAGIFN 199 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V S A GD V A +DGE TVK+ Q + LIP N + PI + + Sbjct: 200 GDWVVVRSQSVAEFGDFVAAMIDGEATVKEFQKDADGLWLIPHNPLFEPI---PAEEATI 256 Query: 128 FGVVIHVVKAM 138 G V V++ + Sbjct: 257 LGKVAAVLRKI 267 >UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3U3_GEMAT Length = 202 Score = 127 bits (319), Expect = 1e-28, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 7/141 (4%) Query: 2 LFIKPAD-LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 + I P++ + V PL V G P A E + + ++ + Y ++ GDS Sbjct: 65 IEILPSEIYQRSVELPLLGS-VAAGAPIEAVHSGE-TMAVPDGFLRRNGSHYVLRVRGDS 122 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQLR--PTVQLIPMNSAYSPI 117 MI+ I DGD ++++ A +G++VIA +DG TVK+ ++L P N P+ Sbjct: 123 MIEEHIRDGDFVVINDKQAADNGEMVIALLDGSGATVKRYYRERDGRIRLQPANETMQPL 182 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 + +D + + G+V+ V++ Sbjct: 183 FVHEDD-VRIQGIVVGVLRRY 202 >UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L2_9GAMM Length = 160 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 2/113 (1%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + + GFPSPA D+++ IDL++LL+++P+AT+ +A G SM G+SDGD+L+ Sbjct: 25 FVPLAAARARLGFPSPADDFMDDAIDLHRLLVRNPAATFLYRADGWSMSGAGVSDGDILV 84 Query: 74 VDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSEDT 124 VD ++T GD+VIA DG + T K LQL ++L N + PI + Sbjct: 85 VDRSVTPQGGDLVIAIWDGNQPTCKVLQLFESHMELHSANPDFPPIVLEQSTE 137 >UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LEXA_ACTSZ Length = 210 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 68/130 (52%), Gaps = 5/130 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E PL V G P A ++E ++ + + P A + +K +G SM + GI DGD Sbjct: 79 EPEGLPLIGQ-VAAGEPILAEQHIEGTYRVDPDMFK-PQADFLLKVNGQSMKNIGILDGD 136 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS--SEDTLDV 127 LL V S +G +++A ++ E TVK+L+ + + L N ++PI ++ ++ ++ Sbjct: 137 LLAVHSTKDVRNGQVIVARIEDEVTVKRLERKGDVIYLHAENEEFAPIVVNLREQERFEI 196 Query: 128 FGVVIHVVKA 137 G+ + +++ Sbjct: 197 EGIAVGIIRN 206 >UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S24 n=2 Tax=Comamonadaceae RepID=Q121D8_POLSJ Length = 146 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 1/120 (0%) Query: 20 DLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 V+ GFPSPA D +R++L LL +F+ ASG SM+ GI DGDLL++ Sbjct: 25 GTVKAGFPSPAEDLGAERLNLASLLGSDKEDAFFMMASGHSMVKFGIFDGDLLLIRKRKR 84 Query: 80 ASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G IVIA VDGEF VK L R V+L+ N + T+ V+GVV +K Sbjct: 85 PRDGHIVIADVDGEFLVKMLYKRAGQVKLVSGNPEIPDLEPKDGQTIRVWGVVTSSIKTF 144 >UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEXA_STRM5 Length = 211 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 3/138 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 +P ++ P+ V G P A + + L+++ P+ Y +K GDSMI Sbjct: 76 LAEPGLPDNVLRLPVLG-RVAAGLPIGADIGSDDFVVLDRVFFS-PAPDYLLKVQGDSMI 133 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISS 121 D GI DGDL+ V A G IV+A +D E TVK L++ + ++L+P N Y PI + Sbjct: 134 DEGIFDGDLIGVHRTRDAHSGQIVVARIDDEITVKLLKIAKDRIRLLPRNPDYKPIEVLP 193 Query: 122 EDTLDVFGVVIHVVKAMR 139 + + G+ +++ R Sbjct: 194 DQDFSIEGLYCGLLRPNR 211 >UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8VMP5_PSEPU Length = 143 Score = 126 bits (317), Expect = 3e-28, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 66/118 (55%), Gaps = 2/118 (1%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 + + GFPSPAADY E I L++LL + + V+ G+SM D GI DG +LIVD Sbjct: 18 VLAGSAAGGFPSPAADYYEPPISLDELLNIRAAHVFIVRVEGESMRDAGIFDGGVLIVDR 77 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +IT G IV+A VD + VK+L P L N AY IT ++DVFGVV Sbjct: 78 SITPCSGQIVLAYVDNQPLVKRLAKAPGDGWLLESANPAYKTITPDEYASVDVFGVVT 135 >UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID=LEXA_CAUSK Length = 235 Score = 125 bits (316), Expect = 3e-28, Method: Composition-based stats. Identities = 35/127 (27%), Positives = 64/127 (50%), Gaps = 4/127 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + G P A + +R+ + + ++ Y ++ GDSMI+ GI DGD +I Sbjct: 112 ELPILG-RIAAGTPIDAIQHERERLPVPESMLG-AGEHYVLEVQGDSMIEAGILDGDYVI 169 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 + TA+ G+IV+A V E T+K+L+ + + L N Y I D ++V G ++ Sbjct: 170 IKKGDTANSGEIVVALVGEEATLKRLRKKGGSIALEAANPKYE-TRIFGPDQVEVQGKLV 228 Query: 133 HVVKAMR 139 +++ Sbjct: 229 GLIRRYH 235 >UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=Hydrogenothermaceae RepID=B2VA45_SULSY Length = 210 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 8/142 (5%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ P + + P + + G P + + IDL+ +L Y ++ G+S Sbjct: 63 IVEKSPKNENSFIF-PYYG-TISAGKPIAIENQTFEYIDLSDIL--RCENCYALRVKGNS 118 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPI 117 MI I + D++IV++ A +G+IV+A +DG E T+KK ++L+P N Y P+ Sbjct: 119 MIGEFILNDDIIIVENRKEALNGEIVVAVIDGEETTLKKFYNLGNGYIKLVPANPDYEPM 178 Query: 118 TISSEDTLDVFGVVIHVVKAMR 139 I D +++ GV+ +V++ + Sbjct: 179 -IYEADRVEIQGVLKGIVRSFK 199 >UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET1_9RHOB Length = 144 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P+ LV GFPSPA D +E ID +++HP++T++ + GD + D GI DGD++ Sbjct: 16 TVPIHLPLVSAGFPSPAGDDLEDEIDPIAWVVRHPTSTFWWRVEGDCLWDVGIRDGDIIA 75 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNS--AYSPITISSEDTLDVFGV 130 VD A G V+A VDG T K L+ R L P NS A+ I ++ + +++GV Sbjct: 76 VDRAGKRRLGRAVLAVVDGTVTAKILRKRDGKYFLSPANSQEAFPDIELTEDS--EIWGV 133 Query: 131 VIHVVKAM 138 + VV+ Sbjct: 134 IAGVVRRY 141 >UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG3_9SPHI Length = 178 Score = 124 bits (312), Expect = 8e-28, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A ++ P +S V GF SPA Y+E+ DLN+L I + ATYFV+ DSM I Sbjct: 16 ATVQTTFFIPFYSYYVNAGFASPAESYIERACDLNELCIDNEEATYFVRVGSDSMSGDRI 75 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDT 124 GD+L+VD + S G IV+ +G+ VK+ + V L+ N Y PI + + Sbjct: 76 ERGDVLVVDCSKEPSDGKIVVVWYNGDHAVKRIYHVEKMVVLLSSNPKYDPIYVHPGED 134 >UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I624_DESAP Length = 196 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++V P+ V G P + + + + L + L T+ ++ G+SM D GI G Sbjct: 71 SQVVEVPVLG-RVPAGGPVVSEEVILDYLPLPRKLAS--EDTFCLEVRGESMQDLGIDSG 127 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVF 128 D ++V TA +G +VIA V+GE T K+ V L P N + P+ + + +++ Sbjct: 128 DYVLVRLQPTAENGQVVIARVEGEVTCKRYYRTDRVVSLEPANRRFRPLRLEAG-EIEIV 186 Query: 129 GVVIHVVKAM 138 GVV +V+K + Sbjct: 187 GVVTNVIKRV 196 >UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW7_CHRSD Length = 145 Score = 124 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 2/117 (1%) Query: 23 QCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASH 82 GFPSPA DY E +DL++ L++ P++T+F+ GD+ G+ GDLL++D AI+ Sbjct: 24 ASGFPSPADDYREAPLDLHRHLVRRPASTFFMHLEGDAHRHAGLHHGDLLVIDRAISPRP 83 Query: 83 GDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G ++A +DGE +V +L+ R + L P + + +D ++GV+ +V+ A+ Sbjct: 84 GHWLVAVIDGELSVLRLERRQSRLYLAPSQPRLAALPFDPDDA-RLWGVICYVIHAL 139 >UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_BRAHW Length = 208 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 73/133 (54%), Gaps = 10/133 (7%) Query: 10 REIVTFPLFSDLVQCGFPSP-AADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++ PL ++ V+ G A + VE+ L + + Q + + +K GDSMI+ I + Sbjct: 77 HNMIKIPLLANEVKAGLLMDVADETVEETYSLPKSIAQDENN-FLMKVIGDSMINAHIKE 135 Query: 69 GDLLIVDSAITASHGDIVIAAVDG----EFTVKK-LQLRPTVQLIPMNSAYSPITISSED 123 GD+++V + A +GDIV+A +D E T+K+ + + V+L+ N+ Y PI + Sbjct: 136 GDMVLVHPSNEADNGDIVVAKIDDNGNEEITIKRFFREKDCVKLVSENNNYPPI---ERE 192 Query: 124 TLDVFGVVIHVVK 136 ++ + G VI +++ Sbjct: 193 SISIVGKVIGLIR 205 >UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPZ6_THISH Length = 197 Score = 121 bits (304), Expect = 7e-27, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 8/139 (5%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 ++P + PL + G P A E +DL L+ Y ++ G+SM+ Sbjct: 64 LRPTGSDAAFSLPLVG-RIAAGRPIEAIPG-EDTLDLADFLLG--PGRYALRVVGESMVG 119 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP--TVQLIPMNSAYSPITIS 120 GI DGD ++V A +A GDIV+A +D E T+K+++ RP V+L N A +P+ + Sbjct: 120 AGILDGDTVVVQQADSARDGDIVVALIDDEEATLKRIRHRPDGQVELRAENPAMAPL-VY 178 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + + GVV+ ++ R Sbjct: 179 DAARVRIQGVVVGQLRGYR 197 >UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepID=LEXA_GLUDA Length = 253 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 5/134 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + P + + G P A +I++ L+ H Y ++ +GDSMI+ GI Sbjct: 123 ATEAGAIHLPFYG-RIAAGQPIEALRETGAQIEVPMNLLGH-GEHYALEVAGDSMIEAGI 180 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 DGD +I+ A +G IV+A +D E T+K+L+ R T+ L P N+ Y P I D Sbjct: 181 LDGDTVIIRRGDVAQNGQIVVALIDDQEVTLKRLRRRGSTIALEPANARYEP-RIVPSDR 239 Query: 125 LDVFGVVIHVVKAM 138 + + G ++ +++ Sbjct: 240 VRIQGQLVGLLRRY 253 >UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK4_9RICK Length = 134 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 43/128 (33%), Positives = 73/128 (57%), Gaps = 2/128 (1%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ V GFPSPA DY+E I+LN+ LI + ++T+ ++ SG SM++ I DGD+LI Sbjct: 6 KLPIILQKVCAGFPSPATDYLEDEINLNEELISNKASTFLIRVSGYSMVEDHIYDGDVLI 65 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIP-MNSAYSPITISSEDTLDVFGVV 131 VD ++ H + + G+ VKK+ + LI + + I I+ ++ V+GVV Sbjct: 66 VDKSLNVKHNSVAVLNYQGQLVVKKIVKKNNKFFLISKLGNHNHFIEITEDNETQVWGVV 125 Query: 132 IHVVKAMR 139 +V+ ++ Sbjct: 126 TYVIHKVK 133 >UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein RulA n=3 Tax=Pseudomonas RepID=Q1XGP5_PSEPU Length = 142 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + L S GFPSPAADY E I L++LL + VK G+SM D GI G L Sbjct: 14 IPLQLLSCTAAGGFPSPAADYYEPPISLDELLNIRAPHIWIVKVEGESMRDAGIFTGTRL 73 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 I+D +TA G IV+A VD + VK+L + L N Y +T T++VFGVV Sbjct: 74 IIDRTVTACSGHIVMAYVDNQPVVKRLAKSAAGWTLESANPTYKAVTPDEYSTVEVFGVV 133 Query: 132 IHVV 135 + Sbjct: 134 TWSL 137 >UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8K2_COPPD Length = 198 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PL V G + A + +E + + + +P+ + +K GDSM GI +GD++ Sbjct: 75 MEVPLIG-KVTAGLKTLAVEELEGYLSMEDIF-ANPNQ-FGLKVKGDSMQGAGILEGDVV 131 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQ--LRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 IV+S +GDI++A +D TVK+++ L P N Y P+ ++ E + + G Sbjct: 132 IVNSDAEWINGDIIVAIIDEMATVKRVKQDKYGNWWLEPDNPKYEPLPLNEE--VQIVGK 189 Query: 131 VIHVVKAM 138 V+ V++ Sbjct: 190 VVAVIRKY 197 >UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ Length = 203 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + P+ V G P A + +E I + + + Y ++ GDSMI+ GI GD Sbjct: 79 QATSIPVIG-RVAAGLPIFADENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGD 137 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 + I++ A +G+IV+A ++ E T+K ++L N Y PI V G Sbjct: 138 IAIIEKRDIARNGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKA---TVIG 194 Query: 130 VVIHVVK 136 ++ + + Sbjct: 195 KLVGLYR 201 >UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPQ3_9BACT Length = 201 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ +V G P A + +E + L++L I+ +F+K GDSM D I GD +++ Sbjct: 70 IPVVGRIV-AGVPVEAEENIEGYMKLDRLTIRS-GGHFFLKVDGDSMKDEAILHGDYVLI 127 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 ++G I ++GE T+K + + L+P N A+ PI + D +V G + Sbjct: 128 KPGPIITNGQIGAFRINGEVTLKTFRQNAEGIYLMPANEAFEPIPVGEYDDFEVIGTLKM 187 Query: 134 VVK 136 V++ Sbjct: 188 VLR 190 >UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_ACIBL Length = 210 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P + G P A + E I L + ++ SG+SM D I DGD ++V Sbjct: 90 LPFLG-RIAAGQPIEAIENPE-TISLGDF--TGSKEVFVLQVSGESMQDEHIVDGDYVLV 145 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 + TA G+IV+A V+ + T+K++ TV+L P N+ PI + + ++ V G VI Sbjct: 146 ERINTARDGEIVVALVENSDTTLKRIYREGETVRLQPSNAKMQPIRVPAG-SVQVQGRVI 204 Query: 133 HVVKAM 138 V++ Sbjct: 205 GVLRKY 210 >UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N447_9BACT Length = 209 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 7/132 (5%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDL-NQLLIQH-PSATYFVKASGDSMIDGGISDG 69 + PL V G PS + ++ E + + N +L +H P + ++ G+SM D GI DG Sbjct: 80 ALAIPLLG-RVNAGLPSESIEFKEGEVCISNTMLGEHTPEQMFALRVQGESMRDLGIYDG 138 Query: 70 DLLIVDS-AITASHGDIVIAAVDGEFTVKKL--QLRPTVQLIPMNSAYSPITISSEDTLD 126 D++I A GDIV+A V GE TVK + ++L P N +S + + + Sbjct: 139 DIVICGQGASKPRPGDIVVALVQGEVTVKSYFPKTGGRIELRPANPDFS-VQVYPIADVT 197 Query: 127 VFGVVIHVVKAM 138 + G V+ + + Sbjct: 198 IQGKVVGLHRKY 209 >UniRef50_A9L6E3 Peptidase S24 and S26 domain protein n=39 Tax=Gammaproteobacteria RepID=A9L6E3_SHEB9 Length = 144 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 49/114 (42%), Positives = 75/114 (65%), Gaps = 3/114 (2%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GFPSPAADY+E + L+QLL++HPS+T+F + +G SM GI DGD+LI+D A + Sbjct: 14 GFPSPAADYLELPLSLDQLLVEHPSSTWFGRTAGRSMEGVGIYDGDILIIDRAAPRRNMS 73 Query: 85 IVIAAVDGEFTVKKLQLRPTVQLIPMN--SAYSPITISSEDTLDVFGVVIHVVK 136 +V+A+ +GEFTVK L ++ + L+ ++ + + I DT V GVVI ++ Sbjct: 74 LVVASYNGEFTVKLLDMKRRL-LVSIDQQQNMTYVAIDEADTFSVDGVVIKSIR 126 >UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7V8_9LACO Length = 222 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 11/139 (7%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L IKP + PL +V G P A + + IQ + Y + G S Sbjct: 90 LLGIKPLQTK----IPLLG-VVTAGQPILAVEDATDYFPIPPS-IQDHNDLYMLTIRGTS 143 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAA-VDGEFTVKK-LQLRPTVQLIPMNSAYSPIT 118 MI GI +GD +IV TA +GDIVIA D E T K+ + + +L P N PI Sbjct: 144 MIKAGILNGDQVIVRKQSTAKNGDIVIAMNEDNEATCKRFFKEKDRFRLQPENDTMDPIY 203 Query: 119 ISSEDTLDVFGVVIHVVKA 137 + + + + G V+ + + Sbjct: 204 LKN---VKILGRVVGLFRD 219 >UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEXA_HALHL Length = 226 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 4/134 (2%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PA P+ V G P A + +E+ ++ L P A Y ++ G+SM D G Sbjct: 81 PATDDPNAGLPVVG-RVAAGSPLLAEESIERYCQVDASLFS-PPADYLLRVRGESMRDAG 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITI-SSED 123 I DGDLL V A G IV+ + E TVK L+ ++LIP + Y I + + Sbjct: 139 ILDGDLLAVRRDTEARDGQIVVVRLHDEVTVKFLERCNGVLRLIPAHPDYPVIEVAADGQ 198 Query: 124 TLDVFGVVIHVVKA 137 + G+ + V+++ Sbjct: 199 DAVLEGIGVGVLRS 212 >UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepID=LEXA_BRUA1 Length = 240 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 5/136 (3%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 + ++ V+ P+ + G P A + L +I Y ++ GDSMID Sbjct: 108 QNSEAPATVSVPVMG-RIAAGVPISAIQNQTHMLSLPPEMIG-AGEHYALEVKGDSMIDA 165 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI DGD +I+ TA+ G+IV+A VD E T+K+ + ++ L N AY I Sbjct: 166 GIFDGDTVIIKRGDTANPGEIVVALVDEEEATLKRFRREGASIALEAANPAYE-TRIFGP 224 Query: 123 DTLDVFGVVIHVVKAM 138 D + V G ++ +++ Sbjct: 225 DRVHVQGKLVGLIRRY 240 >UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGU3_CLOCL Length = 648 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + E+ P+F++ + G P + L + +++ + +K SGDSMI+ + Sbjct: 518 VEESELKRIPVFNN-IAAGSPILINEEESDGFFLPKAFLKNNKEFFMLKVSGDSMINANL 576 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 ++ D +I++ + + I A+ E T+K+++++ V LI N Y P+ + S+D + Sbjct: 577 NNEDYVIIERSAQVDNMQIAAVAIGEEATLKRIKIKGNSVTLISENQNYPPMMVHSKD-V 635 Query: 126 DVFGVVIHVVKA 137 + G + V+K Sbjct: 636 RILGNAVGVIKK 647 >UniRef50_Q03B55 LexA repressor n=14 Tax=Lactobacillus RepID=LEXA_LACC3 Length = 208 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 6/125 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ V G P A + ++ + L + ++ G+SMI GI DGD +IV Sbjct: 85 IPIVG-TVAAGVPITAIENIDDYFPVPDDLPYAADELFMLRVQGNSMIKIGILDGDQIIV 143 Query: 75 DSAITASHGDIVIAAV-DGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +G IV+A + E TVK+ + ++L P N + + + + G+V+ Sbjct: 144 KKQNDAENGQIVVAMTEEDEATVKRFYKEKNGIRLHPENDSMDDMFFP---DVTILGIVV 200 Query: 133 HVVKA 137 + + Sbjct: 201 SLYRP 205 >UniRef50_UPI0000382BE7 COG1974: SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382BE7 Length = 133 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 5/123 (4%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD--GDLLIV 74 L + GFPSPA D+VE ++L + L+ +P AT+ + S D D DL V Sbjct: 3 LMGPSLCAGFPSPADDFVENALELPRWLVPNPPATFLWRIS--RRFDARSWDLRRDLACV 60 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVFGVVIH 133 + ++ HG +V+AAVDGE ++K++ + +L N +DV+GVV Sbjct: 61 ERSLKPDHGSVVVAAVDGEMSIKRMVVEGNTARLSVDNPELPVFATEELAEVDVWGVVHF 120 Query: 134 VVK 136 ++ Sbjct: 121 TIR 123 >UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA_THELT Length = 200 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E + P+ + G A + + I++ + +I+ + ++ G+SMI+ I Sbjct: 69 NRSEAIRLPVVG-TIAAGNAIEAIENPTEIIEVPKAMIKIGFDHFLLRVRGESMIEEHIL 127 Query: 68 DGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 D D +++ TA++GDIV + E T+KK+ + P + L P NS PI + E + Sbjct: 128 DKDYVVIRKQNTANNGDIVAVLTNSNEATLKKIYIEPEKIILKPANSKMQPIELKPE-NV 186 Query: 126 DVFGVVIHVVK 136 + G ++ V++ Sbjct: 187 KILGKMVGVIR 197 >UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) RepID=B9KYW2_THERP Length = 214 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 11/136 (8%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVE-----QRIDLNQLLIQHPS-ATYFVKASGDSMIDGG 65 +V PL + G P P + +E + ++L L+ HP+ + ++ G SMID Sbjct: 80 VVRVPLVG-TIAAGQPLPVLEPIEVDGAAEYVELGSQLVGHPARDLFALRVKGQSMIDAL 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRPT-VQLIPMNSAYSPITISSE 122 I DGD++++ TA +GD V A + + E T+K+ V+L P N+ PI + Sbjct: 139 IDDGDIVVLRRQATAENGDTVAAWLRREQETTLKRFYREGNLVRLQPANATLQPIYTT-I 197 Query: 123 DTLDVFGVVIHVVKAM 138 D +++ G ++ V++ + Sbjct: 198 DNVEIQGKLLLVIRRL 213 >UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_METEA Length = 258 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + V P+ + G P A + I ++ + Y ++ GDSMI+ GI DGD Sbjct: 132 QSVMVPVMG-RIAAGVPISAIESQSHSISMSPDFLSG-GEHYALEVRGDSMIEAGILDGD 189 Query: 71 LLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 L+++ TA++GDI++A +D E T+K+L+ R ++ L N AY + D + + Sbjct: 190 LVVIHKQETANNGDIIVALIDDEEATLKRLRRRGSSIALEAANPAYETRVLGP-DRVRIQ 248 Query: 129 GVVIHVVKAM 138 G ++ +V+ Sbjct: 249 GKLVSLVRRY 258 >UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 8797 RepID=A6CDG4_9PLAN Length = 202 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 70/138 (50%), Gaps = 18/138 (13%) Query: 5 KPADLREIVTFPLFSDLVQCGFPS--PAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 KPA++ FS +Q G P PAAD + ++D + L + + +K G+SMI Sbjct: 78 KPANVT-------FSGSLQAGTPIIPPAAD--DSQVDFSALFESGDN--FCLKVKGNSMI 126 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITIS 120 + I +GD ++V T G+IV+A VD E T+K+ V+L P NS SPI + Sbjct: 127 EAQIQEGDFVVVKKQDTCQQGEIVVALVDNQEATLKRFYQEADRVRLEPANSTMSPIYST 186 Query: 121 SEDTLDVFGVVIHVVKAM 138 + V GVV V++ Sbjct: 187 ---DVQVLGVVKGVIRKF 201 >UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepID=LEXA_BRASO Length = 232 Score = 117 bits (294), Expect = 1e-25, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D V P+ + G P A I + ++ + Y ++ GDSM+D GI Sbjct: 103 DGERPVAVPVMG-RIAAGTPIEALQTRSHTISVPADMLGN-GDHYALEVRGDSMVDAGIL 160 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 DGD+ ++ TA GDIV+A +D E T+K+ + R ++ L P N+AY + I + + Sbjct: 161 DGDMALIQRNETADTGDIVVALIDDEEATLKRFRRRGASIALEPANTAYE-VRILPPNRV 219 Query: 126 DVFGVVIHVVKAM 138 + G ++ + + Sbjct: 220 KIQGKLVGLYRKY 232 >UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX34_PAESJ Length = 215 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D E VT P+ + CG A +Y+E + I + ++++A GDSM I Sbjct: 84 VDESENVTLPVVG-KISCGNGQIAYEYIEGYESTPRSWI-NGGEYFYLRAKGDSMQGARI 141 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED-T 124 DGDLL++ G+I + E +K++ + T+ L N+ Y PI ++ + Sbjct: 142 FDGDLLLIRKQEEVEDGEIAAVLIGEEAVLKRVYRQGTTLVLQSENANYPPIICTAGENN 201 Query: 125 LDVFGVVIHVV 135 + V G + VV Sbjct: 202 IYVIGKLKKVV 212 >UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM Length = 258 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 5/139 (3%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 PA I+ PL +V G P A + I++ + + GDSM Sbjct: 116 TLQTPAVAPIIMELPLVG-IVAAGRPVQAFQ-LADAIEVPSAMAG--PGNVVYEVRGDSM 171 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS 120 ++ GI DGD + V A G VIA V+G T+KK + +QL+P NSA SPI +S Sbjct: 172 VEMGIMDGDYVAVHQQAVAETGQTVIAEVNGSITIKKYVRKGNSIQLLPANSAMSPIAVS 231 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +D + GV++ ++ + Sbjct: 232 EDDEFHIRGVLVGSMRFYK 250 >UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GWN0_FLAPJ Length = 148 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 3/118 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GFPSPA D+VEQ++ L++ I +P+ TY +K G+SM + GD+LIV S + Sbjct: 33 VQAGFPSPAEDFVEQKLSLDEKYISNPNNTYLIKVRGNSMY-PTLQIGDILIVKSDLDLK 91 Query: 82 HGDIVIAAVDG-EFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 I I +++ ++TVK+ R + NS Y I I ED++ GVV ++++ + Sbjct: 92 DNKIAIVSINNSDYTVKRYSKRKKT-FVADNSEYPNIDIEEEDSILCLGVVKNLIRDL 148 >UniRef50_Q8P6K4 Polymerase V subunit n=2 Tax=Xanthomonas RepID=Q8P6K4_XANCP Length = 159 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 44/125 (35%), Positives = 74/125 (59%), Gaps = 3/125 (2%) Query: 3 FIKPADLREI-VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 + PA L + + P+ + +Q GFPSPA D+ + +DLN++LI++P AT+ +A G SM Sbjct: 13 LLGPACLDPVPLCLPVSALRIQLGFPSPAEDFQDDELDLNRVLIRNPPATFLYRAEGWSM 72 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITI 119 I G+ DGD+L+VD ++ GD+V+A DG + K LQ+ ++L + +PI + Sbjct: 73 ILAGVCDGDILVVDRSVRPIQGDMVLAIWDGNQPVCKILQVAVDHIELHSRSPHCAPIVL 132 Query: 120 SSEDT 124 + Sbjct: 133 APGTE 137 >UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ7_9GAMM Length = 196 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 8/126 (6%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL + G P A + +Q +DLN L S Y ++ GDSM++ GI DGD ++ Sbjct: 74 TLPLMG-RIAAGQPIEAVNDQQQ-LDLNSLFAG--SNRYALQVKGDSMVEAGICDGDWVV 129 Query: 74 VDSAITASHGDIVIAAVDGE-FTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFGV 130 ++SA TA +GDIV+A VD E T+K + R V LIP NSA + + E+ + + G+ Sbjct: 130 IESAQTARNGDIVVALVDDEDATLKTIDYRAGGQVALIPSNSAMEAM-VYPEERVQIQGI 188 Query: 131 VIHVVK 136 + ++ Sbjct: 189 LKGQLR 194 >UniRef50_D0S989 SOS-response transcriptional repressor n=2 Tax=Acinetobacter johnsonii SH046 RepID=D0S989_ACIJO Length = 204 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 20/147 (13%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V+ P+ + + G D ++ +DLN+ LI +P +T+ +SM+D G D + Sbjct: 55 VSIPVSLERIPAGPAFSTKDEQDKALDLNEFLIHNPISTFIAYVDSESMLDAGFEINDPI 114 Query: 73 IVDSAITASHGDIVIAAVDG-EFTVKKLQLR-------------------PTVQLIPMNS 112 IVD +I A H DIVIA +D T+K+L + P + L N Sbjct: 115 IVDRSIEAKHYDIVIALIDNSSSTIKRLMITSKMSKSEIKEIFGDEDYPLPDLWLKAENP 174 Query: 113 AYSPITISSEDTLDVFGVVIHVVKAMR 139 Y+ I + T+ ++GVV +K + Sbjct: 175 RYNHIIPNDSQTISIWGVVTFNLKRIH 201 >UniRef50_Q03WX0 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_LEUMM Length = 212 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 14 TFPLFSDLVQCGFPSPA-ADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P+ +V G P A + + + L+Q + + GDSM++ GI DGD + Sbjct: 87 KIPVLG-MVTAGTPILAVEEEATEFFPIPDNLMQFDGDLFMLNVHGDSMVNIGILDGDKV 145 Query: 73 IVDSAITASHGDIVIAAVD-GEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGV 130 IV A +GD+V+A D E TVK+ +L P N++ +PI + + + G Sbjct: 146 IVRKQENADNGDVVVAMNDNNEATVKRFFREADHYRLQPENNSMAPIIL---QKVSILGK 202 Query: 131 VIHVVKA 137 VI + + Sbjct: 203 VIGLYRD 209 >UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX5_9CLOT Length = 147 Score = 114 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 69/126 (54%), Gaps = 5/126 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 R +T ++ + V G + D + +++++ L+ ++ + VK SGDSM + Sbjct: 16 PFRRAIT--VYENAVSAGTGNFLEDGPSRTLNIDEALLPENTS-FGVKISGDSM-EPEFH 71 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLD 126 DGD+ V T +G+I I +++G+ +KKL+ + + L+ +N Y+PI +S D D Sbjct: 72 DGDIAWVVKQETVENGEIGIFSLNGDAYIKKLREDKEGIFLVSLNKKYAPIRVSENDRFD 131 Query: 127 VFGVVI 132 VFG V+ Sbjct: 132 VFGKVV 137 >UniRef50_A9BGA3 LexA repressor n=1 Tax=Petrotoga mobilis SJ95 RepID=LEXA_PETMO Length = 205 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 4/124 (3%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 S + G A + I + + ++ G+SMI+ I GD +++ Sbjct: 83 VSGKIAAGDAIEAIQTISDYIPIPTNFFPKNYEYFSLRVEGNSMIEAQIKSGDFVLIRKQ 142 Query: 78 ITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A GDIV+A +DG + T+K+ + V LIP N + I + + D L + G ++ + Sbjct: 143 DYAMDGDIVVALIDGNDATLKRYKRLNEDEVLLIPENKSMKEIKVKA-DHLKIQGKMVGL 201 Query: 135 VKAM 138 ++ + Sbjct: 202 IRVL 205 >UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF130_AEPn_1 RepID=D0E8J3_9BACT Length = 204 Score = 112 bits (282), Expect = 2e-24, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 11/128 (8%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRI-DLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL V G A + VE + DL ++ ++ GDSM D GI + DL+ Sbjct: 84 VPLLGS-VSAGTGILAEENVETYLPDL------GGGESFVLRVRGDSMKDAGIYEDDLVY 136 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT--LDVFGV 130 V+ +GDIV+A V+ E T+K + ++LIP NS+Y + +SED +++ GV Sbjct: 137 VEQKALPRNGDIVVALVENEATIKVYENHENVIRLIPRNSSYKVQSFNSEDEHRINIVGV 196 Query: 131 VIHVVKAM 138 V H+++ Sbjct: 197 VKHLLRRY 204 >UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF89_CLOTS Length = 268 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 7/132 (5%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + + P++++ + G+P+ + D + + P A + V +GDSMI+ GI DG Sbjct: 136 KPVTYVPVYANKIPAGYPNEVG--TDDICDWYVVPSEIP-ADFAVNVTGDSMINAGIDDG 192 Query: 70 DLLIVDSAITASHGDIVIAA-VDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 D++ TA +GDI+IA +GE T+K Q L+P N Y PI +++ + Sbjct: 193 DIVFATINTTADYGDIIIAVSENGEVTIKYFIQKDNQYFLMPANPDYKPIPFTND--FRI 250 Query: 128 FGVVIHVVKAMR 139 G+V ++K R Sbjct: 251 VGIVTGILKEPR 262 >UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepID=LEXA_NOVAD Length = 234 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 6/132 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL + G P A + + + L+ Y ++ SGDSM++ GI DG Sbjct: 107 NDVIELPLHG-KIAAGVPIEALE-TTATLPVPAALLG-AGEHYALEVSGDSMVEAGIFDG 163 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDV 127 D +V A G+IV+A V G E T+K L + V+L P N+AY P E + V Sbjct: 164 DYALVRKTDVARDGEIVVALVRGEEATLKYLHREKGMVRLDPANAAYDPQYYRPE-EVAV 222 Query: 128 FGVVIHVVKAMR 139 G + +++ Sbjct: 223 QGKLAGLLRRYH 234 >UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE14_EUBR3 Length = 244 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 3/134 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M + A + + +F + V G + D ++ + +++ ++ T+ V+ SGDS Sbjct: 101 MYEKQTAKIIPFRSIDIFENAVSAGTGNFLVDGPKETVHIDESILPE-DTTFGVRISGDS 159 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITI 119 M + DG + V + ++G+I I A++GE +KKLQ + + LI +N Y+PI + Sbjct: 160 M-EPEFHDGQIAWVLQQESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKV 218 Query: 120 SSEDTLDVFGVVIH 133 D LD+FG V+ Sbjct: 219 GENDRLDIFGKVLG 232 >UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=Bacteria RepID=C3RNC9_9MOLU Length = 206 Score = 112 bits (280), Expect = 4e-24, Method: Composition-based stats. Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + + +T PL+SD + CG D V++ I L + L+ + A GDSMI+ I+ Sbjct: 72 ITDSITIPLYSD-ISCGTGLFVDDNVDEYISLPETLLSPSKEYFCQYADGDSMINENINQ 130 Query: 69 GDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQLRPT---VQLIPMNSAYSPITISSEDT 124 GDL++ + + +G++ +D T KK + L P N Y+PI I+ E Sbjct: 131 GDLIVFEKSNQIRNGEVGCFTIDDNVATCKKFYRDDNNHCIILQPANPEYTPIVINQESQ 190 Query: 125 --LDVFGVVIHVVKA 137 V G + V+ Sbjct: 191 AGFRVIGKLTLVINK 205 >UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9V1_9FIRM Length = 217 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 7/129 (5%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 +++I+ P+ +QCG P + + E + +I ++ + + A GDSMID GI Sbjct: 86 PVKKIIKIPILGH-IQCGKPVMSVENYEGYFTADPEMI---NSDFCLYADGDSMIDAGIH 141 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT-- 124 +GDL+ +G I +D T+K+ + + L P N +YSPI I+ +++ Sbjct: 142 EGDLVFFKQTPQVENGSIAAVFIDDTTTLKRFYKKENQIILQPENKSYSPIIINLDESTN 201 Query: 125 LDVFGVVIH 133 + + G ++ Sbjct: 202 IRILGEMVG 210 >UniRef50_UPI00016C36BD LexA repressor n=2 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C36BD Length = 243 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 37/134 (27%), Positives = 68/134 (50%), Gaps = 6/134 (4%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P + P +V G +A+ +QR+++ +L + VK G SMI+G Sbjct: 113 PGVTSGGFSLPFVG-VVAAGKAIESAED-DQRLEMRELF--GSEDLFVVKVRGTSMIEGH 168 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISS-ED 123 I+DGD +++ A T +G+ V+A ++ T+KK + +QL PMNS PI + + Sbjct: 169 IADGDFVVIRKAETCENGEKVVAMIEKAMTLKKYYKKKNEIQLHPMNSTMEPIIVDPSRE 228 Query: 124 TLDVFGVVIHVVKA 137 + + G++ V++ Sbjct: 229 DIRILGILAGVIRK 242 >UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7RPS7_9RHOB Length = 239 Score = 110 bits (277), Expect = 1e-23, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P A + + + ++ Y ++ GDSMID GI+DGD++++ Sbjct: 116 IPMMG-RIAAGVPIEAISTMTHSVAVPGSMVSGRGEHYALEVKGDSMIDAGINDGDVVVI 174 Query: 75 DSAITASHGDIVIAAV-DGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +GDIV+A V D E T+K + ++ L N AY + D + V G ++ Sbjct: 175 RETSVADNGDIVVALVEDHEATLKTFKRHGSSIALEAANPAYE-TRVLPADKVKVQGRLV 233 Query: 133 HVVKAM 138 +++ Sbjct: 234 GLIRTY 239 >UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5FPB3_DEHSB Length = 214 Score = 110 bits (276), Expect = 1e-23, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%) Query: 13 VTFPLFSDLVQCGFPSPAADY-------VEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 ++ P+ + G P P + ++ I++ + L + Y ++ G SMI+ Sbjct: 80 ISIPVIGQ-IAAGTPIPVPESDSFAVVTSDESIEVTEDLTRGRENIYALRVKGVSMIEDL 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 I+DGDL+I+ T +G+ + E T+K++ + P V+L P N PI Sbjct: 139 INDGDLVIMQHTQTVDNGETAAVWLKDQKEVTLKRIYMEPGRVRLQPANRTMPPIYTKP- 197 Query: 123 DTLDVFGVVIHVVKAM 138 D +++ G VI V++ + Sbjct: 198 DNVEIQGRVIAVIRQL 213 >UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens RepID=B1R9D2_CLOPE Length = 354 Score = 110 bits (276), Expect = 2e-23, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 8/141 (5%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + K D + I + V G PS A + VE+ + L Q + + +GDSM Sbjct: 213 YKKNKDYKNITCINKYGS-VAAGIPSFACEDVEKLLYLPQKYFSPAYDYFALTINGDSM- 270 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR---PTVQLIPM--NSAYSPI 117 + DG+++IV A +GDI+IA + GE T K+ +LIP N Y P Sbjct: 271 NKLYEDGEIIIVRKQNYARNGDIIIACILGEATCKEYYFNKDDDKNELIPHSTNPKYKPQ 330 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 + S+ D + + G+V + + Sbjct: 331 SYSN-DEIIILGIVECSLNKI 350 >UniRef50_B4TAQ3 DNA polymerase V subunit n=11 Tax=root RepID=B4TAQ3_SALHS Length = 223 Score = 110 bits (275), Expect = 2e-23, Method: Composition-based stats. Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 5/124 (4%) Query: 20 DLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 + GFPSPA+DYVE RI L+Q LI P+ATYF++AS S GI G LL+VD++++ Sbjct: 91 RTIAMGFPSPASDYVETRISLDQQLISQPAATYFMRAS-RSHFREGIIQGALLVVDASLS 149 Query: 80 ASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD----VFGVVIHVV 135 A G ++I A+DGEF +K+ + P LI + + D + +FGV+ +++ Sbjct: 150 ACDGSLLICAIDGEFRIKRYRTHPQPHLINLENGRKEALPEDGDGYNSSHAIFGVITYII 209 Query: 136 KAMR 139 R Sbjct: 210 NDAR 213 >UniRef50_A4J3R4 Putative prophage repressor n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3R4_DESRM Length = 210 Score = 109 bits (274), Expect = 2e-23, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 9/130 (6%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + G P A + ++ + + + S + ++ GDSMI I DGD++ Sbjct: 86 KIPIIG-AIAAGIPILAQENIDGY----EYIPDNVSIDFCLRVKGDSMIGARILDGDIVY 140 Query: 74 VDSAITASHGDIVIAAVDG-EFTVKKLQ-LRPTVQLIPMNSAYSPITISSED--TLDVFG 129 + +G+I +D E T+K++ L +V L N Y S +D + + G Sbjct: 141 IRKQPQVENGEIAAVIIDNEEATLKRIYALNGSVILRAENPNYPDKVFSKKDMKQISIIG 200 Query: 130 VVIHVVKAMR 139 I +R Sbjct: 201 KAIFFKSEVR 210 >UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C0CQZ2_9FIRM Length = 227 Score = 109 bits (273), Expect = 3e-23, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 10/125 (8%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + + CG P + + ++ + A + +KA GDSM++ I DGD++ Sbjct: 102 KLPMLGE-IACGKPIFMDENRDNY----TMIGSNVKADFCLKAKGDSMVNARIMDGDIVF 156 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP---TVQLIPMNSAYSPITISSE--DTLDVF 128 + S +G+I A+D E T+K+ TV LI N Y+P+ + E + + Sbjct: 157 IRSQPEVENGEIAAVAIDDEATLKRFYRDEITQTVTLISENPIYAPMVFTKECQKNVYIL 216 Query: 129 GVVIH 133 G + Sbjct: 217 GKAVA 221 >UniRef50_A5D283 SOS-response transcriptional repressors n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D283_PELTS Length = 224 Score = 108 bits (270), Expect = 6e-23, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 8/136 (5%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++ P+ V G + + + + + + ++ GDSM GI D Sbjct: 90 FNDMTGIPVLG-TVSAGELLYSEQNISGYLPFPRKMADGK--YFALRVKGDSMTGEGIYD 146 Query: 69 GDLLIVDSAITAS-HGDIVIAAVDG-EFTVKKL--QLRPTVQLIPMNSAYSPITISSE-D 123 GDL+++ +G IV A V+G E T+K + L N AY I + D Sbjct: 147 GDLVLIRRQSHVDFNGQIVCALVNGEENTLKIFLQDENGNILLKAANPAYPDIVLQHGKD 206 Query: 124 TLDVFGVVIHVVKAMR 139 L + GV V K + Sbjct: 207 ALVIQGVFAGVFKFPK 222 >UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K8_DEIDV Length = 211 Score = 108 bits (270), Expect = 7e-23, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + + G P A VE I +I Y ++ GDSMI GI D++IV Sbjct: 81 PLVGE-IAAGQPGHAEQNVEAYITRLDQVIDMKEGDYLLRVRGDSMIGVGIYPQDIVIVR 139 Query: 76 SAITASHGDIVIAAVDGE--FTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 T +GDI + + GE T+K++ + L N Y P+T + D + + G ++ Sbjct: 140 PNETVPNGDIAVVLLPGESTATLKRVEHQNSKITLHSANPDYPPMTFPARD-VRIQGCLV 198 Query: 133 HVV 135 + Sbjct: 199 AHI 201 >UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA_THEM4 Length = 199 Score = 107 bits (269), Expect = 9e-23, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 3/128 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E + P+ + G + V++ I++ +I + +K G+SMID I +G Sbjct: 71 QESILIPVKG-KISAGMGIEMFEIVDEEIEIPVRMISGFGNYFALKVEGNSMIDAHIING 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVF 128 D +I+ +G I D + T+K+ + V+L+P N +PI ++D + V Sbjct: 130 DYVILKKQYRIPNGQIAAVVFDNKVTLKRFYHKKDKVELVPENKDMNPIVCDAKD-IKVI 188 Query: 129 GVVIHVVK 136 G ++ +++ Sbjct: 189 GKLVGIIR 196 >UniRef50_Q2Y5T8 Putative prophage repressor n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y5T8_NITMU Length = 210 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 7/127 (5%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 V+ G P AD + + ++ LI+ PS T GDSMID GI +GD++I++ + Sbjct: 73 VGPGVRAGRPQQTADVQPELLRIDDYLIEKPSQTILFPVKGDSMIDLGILEGDIVIIERS 132 Query: 78 ITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMN----SAYSPITISSEDTLDVFGVVI 132 +AS G++V+A VD EFT+K L + + L N Y PI + L+++G + Sbjct: 133 SSASPGEVVLAIVDSEFTLKVLARDKEGYYLEARNEARGKEYPPI--RPQQKLEIYGFYV 190 Query: 133 HVVKAMR 139 + + ++ Sbjct: 191 GLFRKIQ 197 >UniRef50_Q4ZV62 Peptidase S24, S26A and S26B n=6 Tax=Pseudomonas syringae group RepID=Q4ZV62_PSEU2 Length = 147 Score = 107 bits (268), Expect = 1e-22, Method: Composition-based stats. Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 5/127 (3%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + P F L G SP VE+ + + +L Y + M G+ GD+L Sbjct: 14 IKLP-FISLSSVGSRSPV---VEKHVSIAELCEVREPHAYLARIEDQGMQGSGMCSGDML 69 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVFGVV 131 +VD + A HGDIV+A+++ ++L +R V L N Y P+ ++ D L + GVV Sbjct: 70 VVDRSQYAEHGDIVVASLNARQICRRLHMRGDVVILESQNPDYPPLHVTDNDDLIILGVV 129 Query: 132 IHVVKAM 138 + +K + Sbjct: 130 TYSLKNL 136 >UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH, RecA-mediated autopeptidase) n=3 Tax=Bacillales RepID=B7GH61_ANOFW Length = 195 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%) Query: 4 IKPADL--REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 +PA E P+ + CG A + ++ ++ + + +F++A GDSM Sbjct: 58 EEPAQYICTEFSRLPIIGS-ISCGDGVIAYEEIKGYEEVPSSWL-NGGEYFFLEARGDSM 115 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITIS 120 I+ I+DG LL++ +G+I +DGE +K++ T+ L N Y PI + Sbjct: 116 INAHITDGALLLIRRQNDVDNGEIAAVLIDGEAVLKRVYKTEDTIILQSENPMYKPIILK 175 Query: 121 SED--TLDVFGVVIHVV 135 D + + G + V+ Sbjct: 176 RNDMKDVRIIGKLKKVI 192 >UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4P0_9GAMM Length = 202 Score = 106 bits (266), Expect = 2e-22, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 9/141 (6%) Query: 2 LFIKPADLR-EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 L +P D+ + VT P+ + G A E IDL+ + + +K +GDS Sbjct: 66 LTEQPEDIAADPVTLPVMG-KIAAGRLVEAVAD-ESEIDLSDMFTG--KGRFVLKVNGDS 121 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR--PTVQLIPMNSAYSPI 117 MID I GD ++V S TA HGDIV+A VDG + T+K L L TV L+P NS Y + Sbjct: 122 MIDKAIMSGDYVVVQSQSTARHGDIVVALVDGFDATLKTLLLNDDGTVTLMPANSHYEAV 181 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 T+ D + V G+V+ ++ Sbjct: 182 TL-PADRVRVQGIVVGQLRTY 201 >UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERI3_9BACT Length = 222 Score = 106 bits (265), Expect = 2e-22, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 4/133 (3%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + IV P+ ++ G + + + + + L + ++ GDSM GI D Sbjct: 84 VENIVEIPIVG-RIRAGRLTGSEIVPDGTLAVPLSLFSEKP-DFVLQIRGDSMNGAGILD 141 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLD- 126 GD+ + A +GD+++A + GE T+K+L + + L N Y+ I +S +D Sbjct: 142 GDMAFIRKTREARNGDLIVAHIQGEMTLKQLIVEKRQIILRAANPLYADIRVSPDDEAAL 201 Query: 127 VFGVVIHVVKAMR 139 V G +I + + R Sbjct: 202 VQGKMIGLFRDQR 214 >UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM Length = 206 Score = 106 bits (265), Expect = 3e-22, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++ VT + V G P A + ++ + + + ++ GDSM + S+G Sbjct: 75 KKGVTINVLG-RVAAGIPIEAITDIIDTEEIPEEMAAT-GEFFGLQIHGDSM-EPKFSEG 131 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSED---- 123 D++IV A GDIVIA ++G + T K+L+ R ++L+ N +Y P+ S+ED Sbjct: 132 DVVIVRQQDDAESGDIVIAMINGDDATCKRLRKYRDGIELVSTNPSYEPMFFSNEDIEQK 191 Query: 124 TLDVFGVVI 132 + + G V+ Sbjct: 192 PVKIIGKVV 200 >UniRef50_Q9G0C2 ORF 221 n=1 Tax=Lactobacillus phage mv4 RepID=Q9G0C2_BPMV4 Length = 221 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 9/132 (6%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQH--PSATYFVKASGDSMID 63 P D +V PL + CG P A +E I + H P + + +K GDSM + Sbjct: 88 PVDQSHLVKIPLIGH-IACGEPITADQNIEGYIT--EYFPDHVDPDSIFALKCEGDSM-E 143 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGE--FTVKKLQL-RPTVQLIPMNSAYSPITIS 120 I DGD+ + G+I VDG+ ++K+++ V L+P N YSPI + Sbjct: 144 PYILDGDIAYIRQQPEVEDGEIAAVLVDGDTRASLKRVKKVGNQVFLLPDNPHYSPIVLD 203 Query: 121 SEDTLDVFGVVI 132 + + G +I Sbjct: 204 QDHPGKIIGKMI 215 >UniRef50_B9XRF1 SOS-response transcriptional repressor, LexA n=2 Tax=Verrucomicrobia RepID=B9XRF1_9BACT Length = 207 Score = 105 bits (264), Expect = 3e-22, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 12/134 (8%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQ-----RIDLNQLLIQHPSATYFVKASGDSMIDG 64 + +V P+F + G A + E+ ID+ L I+ + T+ ++ GDSMI Sbjct: 77 KRVVDIPVFGS-IPAG---LAENRYEEARGCVSIDVGTLNIKPTTRTFALEVRGDSMIGK 132 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSED 123 I GD++I++ + A GD+V A +D E T+K + R L N YS + D Sbjct: 133 NICPGDIVILEHGVEAKVGDVVAALIDNESTLKTYVKERSKTYLRAENPKYS--KLIPAD 190 Query: 124 TLDVFGVVIHVVKA 137 L + GV+I +++ Sbjct: 191 ELVIQGVMIALIRR 204 >UniRef50_D1R7F0 LexA repressor n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7F0_9CHLA Length = 206 Score = 105 bits (262), Expect = 5e-22, Method: Composition-based stats. Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 6/138 (4%) Query: 2 LFIKPADLREI-VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 L KP++L + + P + GFP Q + + + L+Q P ++Y ++A G+S Sbjct: 69 LETKPSNLNQHELELPFIGH-ILAGFPVEIFPKT-QSLAVPKFLVQEPDSSYILRARGNS 126 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFT-VKKLQLRPT-VQLIPMNSAYSPIT 118 + D ISDGDLLIV++ A G+ ++A ++ T +K+ V+L +SA SPI Sbjct: 127 LNDEMISDGDLLIVETGREACSGEWIVALLNEHETFIKRYYPEGQYVRLAGHDSAQSPIM 186 Query: 119 ISSEDTLDVFGVVIHVVK 136 I +D L + G+V+ +V+ Sbjct: 187 IHLDD-LVIQGIVVGLVR 203 >UniRef50_B2UKF5 Peptidase S24 and S26 domain protein n=2 Tax=Ralstonia pickettii RepID=B2UKF5_RALPJ Length = 212 Score = 104 bits (261), Expect = 7e-22, Method: Composition-based stats. Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 8/132 (6%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRI---DLNQLLIQHPSATYFVKASGDSMIDGGISD 68 T L D V+ GF A + L+QLL+ PS T VK GDSM++ GI Sbjct: 69 FFTLELSDDEVRAGFG--ADGDATGLVQAQALDQLLMAKPSKTVLVKVRGDSMLNVGILS 126 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDV 127 GD+ +V+++ A GDIV+A +DG T+K+ + R +L+ T++ E TL++ Sbjct: 127 GDVAVVETSSQALTGDIVVAEIDGSQTIKEFRNDRGQPRLVSH--GMDGKTVTPEKTLNI 184 Query: 128 FGVVIHVVKAMR 139 GVV +V++ R Sbjct: 185 IGVVRGIVRSYR 196 >UniRef50_C8W2C3 Peptidase S24 and S26 domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2C3_DESAS Length = 338 Score = 104 bits (260), Expect = 9e-22, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ ++ G P + ID+ L+ + + +G+SMI GI++GDL++ Sbjct: 163 IPILGS-IRAGIPLLSEQNKIGEIDVPANLVGRVD--FALYVNGNSMIGAGINEGDLVLC 219 Query: 75 DSAITASHGDIVIAAVD-GEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 G+IV+A V+ E T+K + V L N Y I + D + G V+ Sbjct: 220 KQDYNPYPGEIVVALVNTDETTLKYYIKENDKVLLRAANPKYKDIELGPGD--QIQGNVV 277 Query: 133 HVVKA 137 ++K Sbjct: 278 KILKE 282 >UniRef50_A5UQF5 LexA repressor n=7 Tax=Bacteria RepID=LEXA_ROSS1 Length = 218 Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats. Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 19/138 (13%) Query: 14 TFPLFSDLVQCGFPSP--------AADYVEQRIDL--NQLLIQHPSATYFVKASGDSMID 63 PL ++ G P P A + +E +DL + L Y +K G SMID Sbjct: 86 RVPLLG-VITAGQPLPNPEDTSTTAVEMIEVPVDLAPPEKL----QNVYALKVRGHSMID 140 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRP-TVQLIPMNSAYSPITIS 120 I DGD++++ TA +G +V + D T+K+ V+L P N PI + Sbjct: 141 ALIDDGDIVLMRYQETADNGQMVAVRIEDDNAVTLKRFYREGDKVRLQPANVTMEPIYVD 200 Query: 121 SEDTLDVFGVVIHVVKAM 138 + + + G V+ V+++M Sbjct: 201 AA-RVHIQGRVVGVLRSM 217 >UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYT5_9BACL Length = 210 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 11/131 (8%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 ++ P+ + G + ++ I ++Q + A + ++ GDSMI+ GI DGD Sbjct: 88 DVSKLPILG-TICAGDGVYIEEEYDEHIFIDQGM----RADFALRVKGDSMIEAGIFDGD 142 Query: 71 LLIVDSAITASHGDIVIAAVD--GEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDV 127 L+ + + +G I + E ++KK V L P N Y PI + +++ Sbjct: 143 LVFIRQQSSVRNGKIAAVRLTDWNEASLKKIFVKNDNVILYPCNPDYEPIVTRN---VEI 199 Query: 128 FGVVIHVVKAM 138 G + V + + Sbjct: 200 IGECVGVYREL 210 >UniRef50_A3ZYP5 LexA repressor n=2 Tax=Planctomycetaceae RepID=A3ZYP5_9PLAN Length = 206 Score = 104 bits (259), Expect = 1e-21, Method: Composition-based stats. Identities = 37/117 (31%), Positives = 56/117 (47%), Gaps = 6/117 (5%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D + V PL + G A + E ID + +H + + GDSMI+ I Sbjct: 79 CDEADEVGLPLVGQ-IAAGVLHEAIEQKE-LIDFRDMFARHDQ--FVLAVKGDSMIEAHI 134 Query: 67 SDGDLLIVDSAITASHGDIVIAAV-DGEFTVKK-LQLRPTVQLIPMNSAYSPITISS 121 DGD ++V +AS G IV+A DGE T+K + ++L P NS+ PI + + Sbjct: 135 EDGDYVVVRKQDSASLGQIVVAETDDGEATLKYWFPEKNRIRLQPANSSMDPIYVKN 191 >UniRef50_A3XM66 SOS-response transcriptional repressors (RecA-mediated autopeptidase)-like n=2 Tax=Flavobacteriaceae RepID=A3XM66_9FLAO Length = 124 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 14/116 (12%) Query: 23 QCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASH 82 Q GFPSPA Y+E RIDLN++L ++ AT+F++ GD + I++GD+LIVD ++ AS Sbjct: 23 QTGFPSPATHYLESRIDLNRILTRNRDATFFIRVKGDGYREFQINNGDVLIVDRSMVASR 82 Query: 83 GDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G + + DGEF + K T + ++GV+ +V+ + Sbjct: 83 GKLAVVVKDGEFKIVKFNRNET--------------SGETEEQLLWGVITYVIHQI 124 >UniRef50_C3AV55 Transcriptional regulator, XRE n=2 Tax=Bacillus cereus group RepID=C3AV55_BACMY Length = 209 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 12/146 (8%) Query: 1 MLFIKPADLREI----VTFPLFSDLVQCGFPSPAADYVEQ-RIDLNQLLIQHPSATYFVK 55 + KP++L E V P+ + CG P A + E R + + +L + Y+++ Sbjct: 68 LTEEKPSNLYEASIRPVKVPILG-KIACGLPIYAEENFEGFRYETSDILPR--GEVYYLE 124 Query: 56 ASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLRPTVQ-LIPMNS 112 A G+SM + I +G +++ +G+I ++G E T+K+++ + V L+P NS Sbjct: 125 AKGNSM-EPTIPNGSFVLIRKQDDVENGEIAAVLINGDTEATLKRVKKQGDVVILMPDNS 183 Query: 113 AYSPITISSEDTLDVFGVVIHVVKAM 138 +Y PI ++S + G I + + Sbjct: 184 SYEPIVLTSNVPARIIGKAIRFTRDL 209 >UniRef50_C4ZFJ7 Putative prophage repressor n=2 Tax=Eubacterium RepID=C4ZFJ7_EUBR3 Length = 243 Score = 103 bits (258), Expect = 2e-21, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%) Query: 20 DLVQCGFPSPAADYVEQRIDLNQLLIQHPSAT-YFVKASGDSMIDGGISDGDLLIVDSAI 78 + V G + D V++ D+ L P T + V+ SGDSM +D D+ + Sbjct: 121 EPVSAGTGNYLEDSVKETYDVGHLA---PEQTDFGVRISGDSMEPLYHTD-DVAWIQKKD 176 Query: 79 TASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 + ++G+I I ++G +K+L P V LI +N Y PI + D+ +FG VI Sbjct: 177 SLANGEIGIFYLNGNTYIKELHDEPDGVYLISLNQKYRPIQVLESDSFKIFGKVIG 232 >UniRef50_UPI0001C171EB SOS-response transcriptional repressor, LexA n=1 Tax=Cylindrospermopsis raciborskii CS-505 RepID=UPI0001C171EB Length = 232 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 9/130 (6%) Query: 15 FPLFSDLVQCGFPSPAADYVE-QRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + G P AD VE + +DL L I P +Y ++ +GDSMI+ I+DGD++ Sbjct: 98 VPILGTIAAGGLIEPFADAVECEYLDLANLPI--PPQSYALRVAGDSMIEDLIADGDVVF 155 Query: 74 VDSAITA---SHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 + +G IV A V+G T+K+ L V L P NS Y PI + + +++ Sbjct: 156 LRPVAEPNLMKNGTIVAARVEGYGTTLKRFYLEGDMVTLKPANSNYQPIQVPAI-HVEIQ 214 Query: 129 GVVIHVVKAM 138 G ++ V + Sbjct: 215 GSLVGVWRNY 224 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 102 bits (256), Expect = 3e-21, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 14 TFPLFSDLVQCGFPSPAADYVE-QRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + P++ + G P + E +R+ + + + VK GDSM D GI +G + Sbjct: 159 SAPIWGE-AAAGIPIESIRMYEGKRLRVPAKYNK----CFAVKVKGDSMKDSGILNGGYV 213 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVV 131 IV S DI + ++ + T+K+ LR V LI N + P+ + V G V Sbjct: 214 IVRSQNMVDDDDIALMMIENQATIKRFHLRGNDVVLISDNDDFEPMVFHRSKEMQVVGKV 273 Query: 132 IHVVKA 137 ++ ++ Sbjct: 274 VYYIRP 279 >UniRef50_B1I2F7 Putative prophage repressor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I2F7_DESAP Length = 245 Score = 102 bits (255), Expect = 4e-21, Method: Composition-based stats. Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 10/132 (7%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++ P+ + +V+ P DY E ++L++ A + V+ SGDSM+ GI++G Sbjct: 64 SDVQPVPVVAGVVKARIPIRTEDYYEGFLELDKKC----RADFAVQVSGDSMVWAGINEG 119 Query: 70 DLLIVDSAITASHGDIVIAAVDGE---FTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 D + + A +G +V+AA++ T+K L N Y + S Sbjct: 120 DFALCRRSEVAHNGQMVVAAIENNDWGGTIKYYVNNGKHYLLRSANPEYKDRIMPSNA-- 177 Query: 126 DVFGVVIHVVKA 137 + G V+ ++K Sbjct: 178 RIVGTVVAILKQ 189 >UniRef50_B3XLT2 Transcriptional regulator, XRE family n=9 Tax=Lactobacillales RepID=B3XLT2_LACRE Length = 220 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 66/135 (48%), Gaps = 11/135 (8%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHP---SATYFVKASGDSMIDGGIS 67 E ++ PL + + CG P A + +E + + + + P + ++ G SM + I Sbjct: 91 ERISIPLIGE-IACGDPITADENIEGYV---EEIFEKPVPKGNLFALRCKGKSM-EPTIH 145 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT 124 DG ++ + T G+I VDG E T+K+++ + + L+P N + PI + ++ Sbjct: 146 DGSIVTIREQPTVEDGEIAAVLVDGDNEATLKRVKHQGNLIMLMPDNKEFDPIILDKDNP 205 Query: 125 LDVFGVVIHVVKAMR 139 + G +HV +++ Sbjct: 206 GRIVGKAVHVSWSIK 220 >UniRef50_D2R3E9 SOS-response transcriptional repressor, LexA n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R3E9_9PLAN Length = 211 Score = 102 bits (254), Expect = 5e-21, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 6/122 (4%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 + + P + E PL V G + A + +RID ++ + + ++ GDSM Sbjct: 78 IELAPEIVAEDKGLPLAG-TVAAGLTNLAFE-QNERIDFAEMFSK--KNLFVLQVRGDSM 133 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIA-AVDGEFTVKK-LQLRPTVQLIPMNSAYSPITI 119 I+ ISDGD ++V +A+ G +V+A + +GE T+K V+L P NS PI + Sbjct: 134 IEAHISDGDYVVVKKQKSANAGQMVVAQSPEGEATLKYWFPEAKGVRLQPANSTMQPIYL 193 Query: 120 SS 121 Sbjct: 194 KE 195 >UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWS0_9FIRM Length = 236 Score = 101 bits (253), Expect = 6e-21, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T L+ V G I++ + SA + V+ GDSM + DG ++ Sbjct: 119 TLSLYDLPVSAGTGQFLDSDRFSEIEVGDEVSS--SADFGVRVCGDSM-EPLYLDGQIIW 175 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 + T G+I + +DG+ VKK +QLI +N Y+PI ++S TL FG V+ Sbjct: 176 IHKQETLEEGEIGVFFLDGDAYVKKYHQSDSGIQLISLNKKYAPIQVTSGSTLKTFGKVV 235 Query: 133 H 133 Sbjct: 236 G 236 >UniRef50_C0WXK0 Possible repressor lexA n=3 Tax=Lactobacillus RepID=C0WXK0_LACFE Length = 212 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 6/130 (4%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + + PL + CG P A + + + + ++++A G SM + I Sbjct: 82 PINRLTKIPLLG-TIACGDPILADENITDYLTEPVDYLPS-GKLFYLRAKGQSM-EPTIK 138 Query: 68 DGDLLIVDSAITASHGDI--VIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 +G L+++ G+I V+ D E T+K+++ T+ L+P N Y PI +S ++ Sbjct: 139 NGSLVLIRQQPEVEDGEIAAVLFTDDDEATLKRVKRSGDTMILLPDNRRYEPIIVSKDNP 198 Query: 125 LDVFGVVIHV 134 + + G + V Sbjct: 199 VRILGKAVRV 208 >UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MB88_9FIRM Length = 209 Score = 101 bits (252), Expect = 8e-21, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 7/133 (5%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMIDGGISD 68 V + V G P A + + ++ + + + + T+F ++ G+SM + S+ Sbjct: 78 HNAVEINVLG-RVAAGIPIDAVEEIIDTEEITEDMAK--TGTFFGLQIHGNSM-EPKFSE 133 Query: 69 GDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLD 126 GD++IV A DIVIA V+G E T KKL+ + LI N AY P+ S+++ +D Sbjct: 134 GDVVIVRQQDDAETDDIVIAIVNGDEATCKKLKKYNDGIVLISTNPAYEPMYFSNKEIMD 193 Query: 127 VFGVVIHVVKAMR 139 +I VVK +R Sbjct: 194 KPVKIIGVVKELR 206 >UniRef50_C4VM34 SOS-response transcriptional repressor n=3 Tax=Lactobacillus jensenii RepID=C4VM34_9LACO Length = 225 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 11/126 (8%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMIDGGISDGDLLI 73 P+ + CG P A +E + L + ATYF +K G SM + I DG + I Sbjct: 103 IPILG-TIACGEPILAEQNIEDYVSL----VPSDDATYFGLKCRGHSM-EPTIHDGAIAI 156 Query: 74 VDSAITASHGDIVIAAVD---GEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFG 129 + T G+I V E T+K+++ + + L+P N + PI + +D + + G Sbjct: 157 IRQQPTVEDGEIAAVLVGEDANEATLKRVRHVNNAILLVPDNENFEPILGTKKDPIRIVG 216 Query: 130 VVIHVV 135 + V+ Sbjct: 217 KAVRVL 222 >UniRef50_B3DST2 SOS-response transcriptional repressor n=6 Tax=Bifidobacterium longum RepID=B3DST2_BIFLD Length = 128 Score = 100 bits (251), Expect = 1e-20, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 1/95 (1%) Query: 45 IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT 104 + H + + ++ +GDSMI+ GI +GDLLIVD ++ GD+V A +D E +K+L R Sbjct: 10 MAHEATLFVMQMAGDSMINAGIHNGDLLIVDRSLAPVPGDVVAAVMDDEIAIKRLVSRAG 69 Query: 105 V-QLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 + L N Y S+ + ++G+V V+ + Sbjct: 70 ITILHAENPRYPDYMPSNGASPAIWGIVTDVIHPL 104 >UniRef50_UPI0001BC9EB9 ultraviolet light resistance protein A n=1 Tax=Pseudomonas syringae pv. tabaci ATCC 11528 RepID=UPI0001BC9EB9 Length = 131 Score = 100 bits (250), Expect = 1e-20, Method: Composition-based stats. Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 1/114 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + P +S + GF +PAA ++EQ +L+ Y + DSM GI D DL+ Sbjct: 14 LLLPFYSFRIPTGFSNPAAAHIEQDFSSGRLMDVRAPYIYVAQIDSDSMRGIGIFDADLI 73 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 VD ++ A H IVIAAV+GE K+L ++ V L N +Y+ I + L Sbjct: 74 AVDRSLKAGHKSIVIAAVNGEPMCKRLCIKGDDVSLQSENPSYAAKYILKGEEL 127 >UniRef50_C6SPU6 Putative transcriptional regulator n=2 Tax=Streptococcus mutans RepID=C6SPU6_STRMN Length = 297 Score = 100 bits (250), Expect = 2e-20, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 6/117 (5%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 ++ + V G ++ I + I P + +G+SM + +GD++ V Sbjct: 185 IYGE-VSAGTGIWVGHEKQETI---KYPIPIPEHDIALIVNGNSM-EPLFYNGDVIFVKK 239 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 HG I++ V+ E VKKL + ++LI +N Y I + +DT++V G VI Sbjct: 240 TKAIHHGQIIVVIVNNEAYVKKLYRKNKEIRLISLNPDYDDIILKEDDTIEVIGTVI 296 >UniRef50_UPI0001744342 SOS-response transcriptional repressor, LexA n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744342 Length = 202 Score = 100 bits (249), Expect = 2e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 7/133 (5%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQ--RIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 RE V P+F L+ GF + ++ + +DL + + S + +K GDSM I Sbjct: 71 ERETVDIPIFG-LIPAGFTADNPEHSDGNLTLDLRTMGLSPRSKPFALKVRGDSMTGAHI 129 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTL 125 GD +I++ DIV A +DGE T+K+ L L N +Y + + E L Sbjct: 130 IQGDYVILE-QRDPRPKDIVAALMDGETTLKRYLVDNGQPFLRAENPSYPDLIPARE--L 186 Query: 126 DVFGVVIHVVKAM 138 + GV++ + + Sbjct: 187 MIQGVMVGLFRPY 199 >UniRef50_B8R672 Ci-like repressor n=1 Tax=Lactobacillus phage Lv-1 RepID=B8R672_9CAUD Length = 219 Score = 99.8 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 12/137 (8%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMI 62 I P E P+ + CG P A +E + L + ATYF +K G SM Sbjct: 87 ISPVAKAEH-QIPVIG-TIACGEPILAEQNIEDYVSL----VPSDDATYFGLKCRGHSM- 139 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVD---GEFTVKKLQ-LRPTVQLIPMNSAYSPIT 118 + I DG + I+ T G+I V E T+K+++ + + L+P N + PI Sbjct: 140 EPTIHDGAIAIIRQQPTVEDGEIAAVLVGEDANEATLKRVRHVNNAILLVPDNENFEPIL 199 Query: 119 ISSEDTLDVFGVVIHVV 135 + +D + + G + V+ Sbjct: 200 GTKKDPIRIVGKAVRVL 216 >UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTE0_9CLOT Length = 222 Score = 99.8 bits (248), Expect = 2e-20, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 9/124 (7%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P A + + ++ + + +K G SM + ISDGD++IV Sbjct: 96 IPVIG-TIPAGTPVEAIEDILDYEEITPQMASQ-GEHFALKIKGQSM-EPKISDGDVVIV 152 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSED----TLDVF 128 +G+I + V+G E TVK+++ P + LIP N AY P+ S+ + + + Sbjct: 153 RKQDDCENGEIAVVLVNGDEATVKRIKKGPEGLMLIPNNPAYEPMFYSNAEIESLPVSII 212 Query: 129 GVVI 132 G V+ Sbjct: 213 GKVV 216 >UniRef50_C0WR03 Bifunctional S24 family peptidase/transcriptional regulator n=2 Tax=Lactobacillus RepID=C0WR03_LACBU Length = 232 Score = 99.8 bits (248), Expect = 3e-20, Method: Composition-based stats. Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 10/133 (7%) Query: 8 DLREIVTFPL----FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 D ++V PL + + G D +Q Q P + +K +GDSM + Sbjct: 103 DAAKVVELPLEILNIAGVASAGTGEELVDERDQI----NYRGQLPKFDFAIKINGDSM-E 157 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSE 122 D + +V A A +G IVIA VDG +K+ T +LI +N Y+PI + Sbjct: 158 PRFHDQQVALVKKAFEAENGQIVIAYVDGRSYIKQFEHTEQTCRLISLNRKYAPIEVQDN 217 Query: 123 DTLDVFGVVIHVV 135 + + G+VI + Sbjct: 218 PSFQIKGIVIGTL 230 >UniRef50_C4Z801 SOS-response transcriptional repressor, LexA n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z801_EUBR3 Length = 213 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 9/138 (6%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + T P+ V G+ A + V +I+++ + + + GDSMI + Sbjct: 79 VPIESGYTIPVLG-RVAAGYGKEAVEEVIGQIEISPSMAA-KGDYFGLLIKGDSMI-PTL 135 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSED- 123 DGD +IV+ A GD+VIA V+G + T K+LQ + LIP N Y P+ + + Sbjct: 136 YDGDTVIVERTDDAESGDLVIALVNGSDATCKRLQKYAEGIALIPQNPVYEPMRFTESEI 195 Query: 124 ---TLDVFGVVIHVVKAM 138 + + G V+ + + Sbjct: 196 DTTPVKILGKVVEMRRKF 213 >UniRef50_D0DME8 LexA repressor n=1 Tax=Lactobacillus jensenii SJ-7A-US RepID=D0DME8_9LACO Length = 208 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 7/126 (5%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 ++ P+ + + CG P A +E +N S +F+KA GDSM+ I + Sbjct: 82 MIKVPVLGE-IACGQPILAEPNIEGYRYIN--CRDQSSNLFFLKAKGDSMV-PTIPENSY 137 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITI--SSEDTLDVF 128 +++D + DIV +D T+K+ V L N + PI + + + + Sbjct: 138 VLIDRDESVEDNDIVAVLIDNSATLKRYHKNGNTVTLTGDNPNFPPIVLTSTEDAIAQIL 197 Query: 129 GVVIHV 134 G I V Sbjct: 198 GKAIQV 203 >UniRef50_B1ZZZ4 Transcriptional repressor, LexA family n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZZZ4_OPITP Length = 200 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 8/137 (5%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL--IQHPSATYFVKASGDSMIDG 64 ++++ P++ + G PS ++ I + + ++ P + ++ GDSMID Sbjct: 67 SEVQGHFELPIYG-TIPAGVPSMQEQQPKETITFDPAVFRLRRPERLWGLEVHGDSMIDA 125 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKL-QLRPTVQLIPMNSAYSPITISSE 122 I DGD+ +++ A GDIV A VD T+K+L ++ L P N+ Y+ I + Sbjct: 126 HILDGDIAVLERR-EAKPGDIVAALVDETTTTLKRLAYVKGKPVLKPENARYALIV--PK 182 Query: 123 DTLDVFGVVIHVVKAMR 139 D L++ GV + ++ + Sbjct: 183 DRLEIQGVFVGLIGRAK 199 >UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG7_CARHZ Length = 254 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 17/130 (13%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL ++ G P A + + I L + A + ++ G+SMI GI GD+ Sbjct: 77 TIPLLG-TIRAGIPLLAEENWIEEIALPAGI----KADFALQVEGESMIYAGIFPGDIAF 131 Query: 74 VDSAITASHGDIVIAAVDGE-------FTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 + TA++G IV A V E F VK L N Y I I+ + Sbjct: 132 FKQSETATNGQIVAAGVVEETWKANLKFYVKT---NGKAFLRSANPKYKDIEITPQH--K 186 Query: 127 VFGVVIHVVK 136 + G++ +V+ Sbjct: 187 IIGIMTGLVR 196 >UniRef50_Q7U5V9 LexA repressor n=45 Tax=Cyanobacteria RepID=Q7U5V9_SYNPX Length = 234 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 9/136 (6%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D+ P+ V G A D V++ +DL +L + + +GDSM+D I+ Sbjct: 103 DMAAAAGIPVLG-AVAAGGLVTAFDDVQEHLDLAPVLETR--GLFALTVNGDSMVDAHIA 159 Query: 68 DGDLLIVDSAITA---SHGDIVIAAVDGE-FTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 DGD+++++ +G +V A V G T+K + V L N AY PI + +E Sbjct: 160 DGDVVLMEPVPDPQRLRNGTVVSALVAGSGTTLKHFHRKGAAVVLEAANPAYDPIELPAE 219 Query: 123 DTLDVFGVVIHVVKAM 138 ++V G ++ V + + Sbjct: 220 Q-VEVQGRLVAVWRQV 234 >UniRef50_A0L3I3 Putative prophage repressor n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3I3_SHESA Length = 244 Score = 99.0 bits (246), Expect = 4e-20, Method: Composition-based stats. Identities = 45/115 (39%), Positives = 67/115 (58%) Query: 25 GFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGD 84 GF SPAA Y E+ + LN L++ HPSAT F + + D+M G+ GDLL+VD ++TA+ GD Sbjct: 18 GFESPAAGYQEKALSLNNLIVSHPSATVFAEVTDDAMTGLGLFTGDLLVVDKSLTATRGD 77 Query: 85 IVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 +V+A V GE ++L + N+ IS D +++ GV I V+ R Sbjct: 78 VVLALVHGETVCRQLDDDHDHHQLHANTNAHYSEISVTDGIEIQGVAICAVRFHR 132 Score = 95.6 bits (237), Expect = 4e-19, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 4/101 (3%) Query: 39 DLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK 98 L+ LL+ +T+ +A G+SM GI GD+LIV +T S GD++IA + EF K Sbjct: 142 SLDDLLV---ESTFVGRARGESMTGVGIHSGDILIVSRQLTPSSGDVIIAMYNEEFVCKV 198 Query: 99 LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR 139 L L + +L+ N + P++I +D GVV ++ ++ Sbjct: 199 LDLSNS-RLLSANDDFEPVSIRLDDRFWCEGVVPASIRLLK 238 >UniRef50_B1ZQH3 LexA repressor n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZQH3_OPITP Length = 199 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA--TYFVKASGDSMIDGGISDGDLL 72 P+F + G P AA + +D+ L + ++ G SM++ GI DGD + Sbjct: 75 IPIFG-TIPAGIPIDAASENGEFLDVEPSLFDSKPGIPVFALRVRGHSMVNAGIKDGD-V 132 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V +A GD+V A VD E T+K+ R L + I + L + GV+ Sbjct: 133 VVLAARDPRKGDVVAALVDKESTLKRYCVERGRAYLKAEGPGFDDIL--PAEELIIQGVM 190 Query: 132 IHVVKA 137 I +++ Sbjct: 191 IGLIRK 196 >UniRef50_B8I150 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I150_CLOCE Length = 281 Score = 98.6 bits (245), Expect = 5e-20, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 7/133 (5%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + P+ L++ G P+ A + E ++ I ++++ GDSM D +G Sbjct: 151 DFIPVPVLG-LIRAGQPAFAEENNEGYYPTDRQFISDDHEYFYLRIKGDSM-DKEFKEGS 208 Query: 71 LLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRPT-VQLIPM--NSAYSPITISS-EDTL 125 L++V T G+I + ++G + TVKK+ +R + L+P N + P T + ++ + Sbjct: 209 LVLVQIQSTLESGEIGVVLINGFDATVKKVFIRDNLITLMPQSNNEDHQPQTYDTVKEEI 268 Query: 126 DVFGVVIHVVKAM 138 + G V+ VK Sbjct: 269 KILGKVVLAVKKY 281 >UniRef50_D1ZXB0 C-terminus not complete (Fragment) n=1 Tax=Sordaria macrospora RepID=D1ZXB0_SORMA Length = 299 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 ADL + S GFPSPA D+ E IDL LL +A++ + SG SMID GI Sbjct: 4 ADLPPAFRLRVVS-AAGAGFPSPAQDWEETAIDLVALLRLDRAASFVFRVSGQSMIDAGI 62 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 D D+++VD T G IVIA VDG F +++L R L N+ + +++++ Sbjct: 63 YDDDVVVVDRDATPVSGRIVIAVVDGGFVIRQLVWRDGKPVLEARNARMRYDAVIADESV 122 Query: 126 DVFGVV 131 +V+GVV Sbjct: 123 EVWGVV 128 >UniRef50_Q5WE12 SOS-response transcriptional repressor n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE12_BACSK Length = 209 Score = 98.6 bits (245), Expect = 6e-20, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 5/133 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 +++ +V P+ V+ G+ A + V + I +++ GDSMID G++ Sbjct: 79 NMQSLVKIPILG-TVRAGYNLLADENVIGYAYAPKSDIGD-GDYFYLNIEGDSMIDAGLN 136 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTL 125 GD ++V S G I + ++G E TVK+ V L P N P ED + Sbjct: 137 SGDRILVRKQNHTSDGSIAVVLINGEEATVKRVFFDSNKVILSPENPHMRP-QFYDEDEI 195 Query: 126 DVFGVVIHVVKAM 138 + G V+ + Sbjct: 196 RILGKVVSASRTY 208 >UniRef50_B7AU39 Putative uncharacterized protein n=5 Tax=Bacteria RepID=B7AU39_9BACE Length = 231 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 8/131 (6%) Query: 5 KPADLREIVTF---PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 KPAD+ I +F + V G S + I + +AT+ V GDSM Sbjct: 103 KPADIIPIHVIQERKVFYNTVSAGTGSFLDSDEYEMISSPDI---PEAATFGVYVDGDSM 159 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITIS 120 + + DL+ ++ G+I I +DG VKK Q LI +N Y PI ++ Sbjct: 160 -EPRYHNKDLIWIEQTACLDDGEIGIFYLDGNAYVKKFQNNRLGTYLISLNKKYDPIPVT 218 Query: 121 SEDTLDVFGVV 131 + +FG V Sbjct: 219 ENSSFKIFGRV 229 >UniRef50_A3SCV4 UmuD protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCV4_9RHOB Length = 102 Score = 98.3 bits (244), Expect = 7e-20, Method: Composition-based stats. Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 1/97 (1%) Query: 43 LLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR 102 +++HPS+T++ + GD + D GI DGD++ VD A G V+A VDG T K L+ R Sbjct: 3 WVVRHPSSTFWWRVEGDCLWDAGIRDGDIIAVDRAGKRRIGRAVLAVVDGAVTAKILRKR 62 Query: 103 P-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 L P NS + + +++GV+ VV+ Sbjct: 63 GDRYYLAPANSQEQFPDVELTEDSEIWGVIAGVVRRY 99 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Ta... 190 1e-47 UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=... 186 3e-46 UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM 179 2e-44 UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S2... 177 9e-44 UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Des... 177 1e-43 UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleoba... 177 1e-43 UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX 175 3e-43 UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria Re... 174 7e-43 UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group Re... 174 9e-43 UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=B... 172 3e-42 UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1... 171 5e-42 UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=... 171 5e-42 UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA... 170 8e-42 UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S2... 170 9e-42 UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZE... 170 9e-42 UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S2... 169 2e-41 UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synech... 169 2e-41 UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A... 169 2e-41 UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 ... 169 3e-41 UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kan... 169 3e-41 UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 ... 168 5e-41 UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S2... 167 9e-41 UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S2... 167 1e-40 UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S2... 167 1e-40 UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta ... 166 2e-40 UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n... 165 3e-40 UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legione... 165 5e-40 UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=... 164 6e-40 UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=... 164 8e-40 UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synech... 164 9e-40 UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1... 164 9e-40 UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S2... 163 1e-39 UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methy... 163 2e-39 UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ 163 2e-39 UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2... 162 3e-39 UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Met... 162 3e-39 UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=... 161 7e-39 UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas ... 160 8e-39 UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sid... 160 2e-38 UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enter... 159 2e-38 UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Des... 159 2e-38 UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7J... 159 2e-38 UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepI... 159 3e-38 UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Met... 159 3e-38 UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Met... 159 3e-38 UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX 158 5e-38 UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=... 158 5e-38 UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cel... 158 5e-38 UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Ser... 158 6e-38 UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID... 157 9e-38 UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gal... 157 1e-37 UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=A... 156 2e-37 UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S2... 156 2e-37 UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Des... 156 2e-37 UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=u... 156 2e-37 UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=... 156 2e-37 UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria ... 155 3e-37 UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nit... 155 4e-37 UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Ps... 154 6e-37 UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular orga... 154 7e-37 UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD... 154 9e-37 UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonen... 154 9e-37 UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Le... 153 1e-36 UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes ... 153 1e-36 UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-me... 152 2e-36 UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Bei... 152 4e-36 UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus D... 152 4e-36 UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum... 150 2e-35 UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus acid... 150 2e-35 UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=... 149 2e-35 UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 149 2e-35 UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEX... 149 2e-35 UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=... 149 4e-35 UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducen... 148 6e-35 UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR 148 6e-35 UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP 147 7e-35 UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Al... 147 9e-35 UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12... 147 9e-35 UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=... 146 2e-34 UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7... 146 2e-34 UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus ... 146 3e-34 UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Ch... 146 3e-34 UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria ... 145 3e-34 UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE 145 4e-34 UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 70012... 145 6e-34 UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_A... 144 6e-34 UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA... 144 8e-34 UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivora... 144 8e-34 UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazo... 144 9e-34 UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax... 144 1e-33 UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D... 144 1e-33 UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modestical... 143 2e-33 UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 ... 143 2e-33 UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_... 143 2e-33 UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium ... 142 3e-33 UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Met... 142 3e-33 UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID... 142 3e-33 UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEX... 142 3e-33 UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovoru... 142 4e-33 UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. P... 142 5e-33 UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 1385... 141 5e-33 UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 R... 141 6e-33 UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA... 141 6e-33 UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID... 141 7e-33 UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 Re... 141 8e-33 UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 140 9e-33 UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR... 140 9e-33 UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterob... 140 1e-32 UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum R... 140 1e-32 UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein ... 140 1e-32 UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0S... 140 1e-32 UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) R... 140 1e-32 UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD 140 1e-32 UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=... 140 2e-32 UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S2... 140 2e-32 UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkeniv... 139 2e-32 UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus... 139 3e-32 UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxid... 139 3e-32 UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=A... 139 4e-32 UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans ... 139 4e-32 UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN 139 4e-32 UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID... 139 4e-32 UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum ... 138 5e-32 UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_... 138 7e-32 UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LE... 137 7e-32 UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM 137 8e-32 UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID... 137 9e-32 UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Ch... 137 1e-31 UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae Rep... 137 1e-31 UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I... 137 1e-31 UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus D... 136 3e-31 UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thi... 135 3e-31 UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydan... 135 3e-31 UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Pa... 135 4e-31 UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LE... 135 4e-31 UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophil... 135 5e-31 UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9... 135 5e-31 UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteol... 135 5e-31 UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S2... 135 6e-31 UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteri... 134 6e-31 UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophic... 134 7e-31 UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232... 134 7e-31 UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T... 134 1e-30 UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LE... 133 2e-30 UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans... 133 2e-30 UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepI... 132 4e-30 UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepI... 132 4e-30 UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEX... 132 4e-30 UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID... 132 5e-30 UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S2... 131 5e-30 UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor... 131 6e-30 UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=... 131 7e-30 UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_... 130 1e-29 UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_... 130 1e-29 UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ 130 2e-29 UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni ... 129 2e-29 UniRef50_Q03B55 LexA repressor n=14 Tax=Lactobacillus RepID=LEXA... 129 2e-29 UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEX... 129 3e-29 UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=H... 129 3e-29 UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA... 128 3e-29 UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepI... 128 4e-29 UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=B... 128 4e-29 UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 1... 128 5e-29 UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter viola... 128 5e-29 UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellat... 128 6e-29 UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 ... 127 9e-29 UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-E... 127 1e-28 UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH... 126 2e-28 UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus... 126 2e-28 UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clo... 126 2e-28 UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N44... 126 2e-28 UniRef50_Q03WX0 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_LEUMM 125 4e-28 UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepI... 125 5e-28 UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8... 125 5e-28 UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_... 124 7e-28 UniRef50_A4J3R4 Putative prophage repressor n=1 Tax=Desulfotomac... 124 1e-27 UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n... 123 1e-27 UniRef50_A9BGA3 LexA repressor n=1 Tax=Petrotoga mobilis SJ95 Re... 123 2e-27 UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM 123 2e-27 UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=S... 123 2e-27 UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET... 122 3e-27 UniRef50_Q9G0C2 ORF 221 n=1 Tax=Lactobacillus phage mv4 RepID=Q9... 122 3e-27 UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7... 122 3e-27 UniRef50_C0WXK0 Possible repressor lexA n=3 Tax=Lactobacillus Re... 122 4e-27 UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein ... 122 4e-27 UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM 122 4e-27 UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE1... 122 5e-27 UniRef50_A5D283 SOS-response transcriptional repressors n=1 Tax=... 121 6e-27 UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF13... 121 6e-27 UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA... 121 8e-27 UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus dese... 120 1e-26 UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group ... 120 1e-26 UniRef50_B3XLT2 Transcriptional regulator, XRE family n=9 Tax=La... 120 1e-26 UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostri... 120 1e-26 UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) Re... 120 2e-26 UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Th... 119 2e-26 UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaeroc... 119 2e-26 UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicu... 119 2e-26 UniRef50_C3WA31 Repressor n=6 Tax=Fusobacterium RepID=C3WA31_FUSMR 119 2e-26 UniRef50_C4Z801 SOS-response transcriptional repressor, LexA n=1... 119 3e-26 UniRef50_C8W2C3 Peptidase S24 and S26 domain protein n=1 Tax=Des... 119 3e-26 UniRef50_C6J0H6 LexA repressor n=1 Tax=Paenibacillus sp. oral ta... 119 3e-26 UniRef50_Q48J39 Peptidase, S24 family n=3 Tax=Pseudomonas syring... 118 4e-26 UniRef50_UPI0001BC4599 putative prophage repressor n=1 Tax=Fusob... 118 4e-26 UniRef50_UPI00016A4599 putative transcriptional regulator n=1 Ta... 118 4e-26 UniRef50_C3AV55 Transcriptional regulator, XRE n=2 Tax=Bacillus ... 118 5e-26 UniRef50_C6SPU6 Putative transcriptional regulator n=2 Tax=Strep... 118 5e-26 UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 87... 118 6e-26 UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein ... 118 6e-26 UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae ... 118 7e-26 UniRef50_A7I013 Putative uncharacterized protein n=1 Tax=Campylo... 118 7e-26 UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 117 1e-25 UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostri... 117 1e-25 UniRef50_D0DME8 LexA repressor n=1 Tax=Lactobacillus jensenii SJ... 117 1e-25 UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5F... 117 2e-25 UniRef50_A1HR30 Putative prophage repressor n=2 Tax=Firmicutes R... 116 2e-25 UniRef50_B8I150 Transcriptional regulator, XRE family n=1 Tax=Cl... 116 2e-25 UniRef50_Q5WE12 SOS-response transcriptional repressor n=1 Tax=B... 116 2e-25 UniRef50_C1D6P9 Transcriptional regulator n=2 Tax=Betaproteobact... 116 2e-25 UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens R... 116 2e-25 UniRef50_C5UY93 LexA repressor n=1 Tax=Clostridium botulinum E1 ... 116 3e-25 UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein ... 115 3e-25 UniRef50_B8GLK4 Putative phage repressor n=1 Tax=Thioalkalivibri... 115 3e-25 UniRef50_UPI0001744342 SOS-response transcriptional repressor, L... 115 4e-25 UniRef50_B9E7T2 Putative uncharacterized protein n=1 Tax=Macroco... 115 6e-25 UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohaloba... 115 6e-25 UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB1... 114 7e-25 UniRef50_C0DVP2 Putative uncharacterized protein n=2 Tax=Eikenel... 114 7e-25 UniRef50_UPI0001BC5823 SOS-response transcriptional repressors n... 114 7e-25 UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed t... 114 7e-25 UniRef50_Q4ZB06 ORF022 n=15 Tax=root RepID=Q4ZB06_9CAUD 114 9e-25 UniRef50_B7CAT6 Putative uncharacterized protein n=1 Tax=Eubacte... 114 1e-24 UniRef50_C4VM34 SOS-response transcriptional repressor n=3 Tax=L... 114 1e-24 UniRef50_B8R672 Ci-like repressor n=1 Tax=Lactobacillus phage Lv... 113 1e-24 UniRef50_B3GVX0 Putative uncharacterized protein n=1 Tax=Strepto... 113 1e-24 UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminoc... 113 2e-24 UniRef50_A0JQA7 CI-like repressor, phage associated n=1 Tax=Lact... 113 2e-24 UniRef50_Q3ZL55 Transcriptional regulator n=1 Tax=Escherichia bl... 113 2e-24 UniRef50_B7ISP5 LexA repressor n=15 Tax=Bacillus cereus group Re... 113 2e-24 UniRef50_C3XGR1 Putative uncharacterized protein n=1 Tax=Helicob... 113 2e-24 UniRef50_B9WXS5 Putative phage repressor n=1 Tax=Streptococcus s... 113 2e-24 UniRef50_C7H9N9 LexA repressor n=2 Tax=Faecalibacterium prausnit... 112 3e-24 UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaeros... 112 3e-24 UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae ... 112 3e-24 UniRef50_A5UQF5 LexA repressor n=7 Tax=Bacteria RepID=LEXA_ROSS1 112 4e-24 UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTC... 112 4e-24 UniRef50_B1BVI0 LexA repressor n=1 Tax=Clostridium perfringens E... 112 4e-24 UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=P... 112 5e-24 UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans ... 112 5e-24 UniRef50_O32506 LexA repressor n=1 Tax=Deinococcus radiodurans R... 112 5e-24 Sequences not found previously or not previously below threshold: >UniRef50_D0KZ55 Peptidase S24/S26A/S26B, conserved region n=9 Tax=Bacteria RepID=D0KZ55_HALNC Length = 243 Score = 190 bits (484), Expect = 1e-47, Method: Composition-based stats. Identities = 73/139 (52%), Positives = 97/139 (69%), Gaps = 1/139 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ ++PA + ++T PLF + GFPSPA DYVE+RIDLN+ LI+H AT+F++ GDS Sbjct: 104 LIPLQPATVAPVLTLPLFGYRIAAGFPSPADDYVEERIDLNRHLIRHKEATFFLRVQGDS 163 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITI 119 MI+ GI DGD+LIVD AI G IVIAA+DGE TVK+L V+L+P N Y I I Sbjct: 164 MINAGIHDGDMLIVDRAIEPVSGKIVIAALDGELTVKRLSASGGVVRLLPENPDYPVIEI 223 Query: 120 SSEDTLDVFGVVIHVVKAM 138 +E L V+GVVIHV+ A+ Sbjct: 224 GAEQELVVWGVVIHVIHAL 242 >UniRef50_P0AG12 Protein umuD' n=92 Tax=Enterobacteriaceae RepID=UMUD_ECO57 Length = 139 Score = 186 bits (472), Expect = 3e-46, Method: Composition-based stats. Identities = 139/139 (100%), Positives = 139/139 (100%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS Sbjct: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS Sbjct: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 SEDTLDVFGVVIHVVKAMR Sbjct: 121 SEDTLDVFGVVIHVVKAMR 139 >UniRef50_A0L9G3 LexA repressor n=6 Tax=Bacteria RepID=A0L9G3_MAGSM Length = 238 Score = 179 bits (456), Expect = 2e-44, Method: Composition-based stats. Identities = 61/136 (44%), Positives = 89/136 (65%), Gaps = 2/136 (1%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 +PA+ T PL V GFPSPA D+VE ++DLNQ L++HP+AT+FV+ +G+SMI+ Sbjct: 102 FRPAEQARF-TIPLAGSRVAAGFPSPADDFVEAQLDLNQHLVKHPAATFFVRVAGESMIE 160 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSE 122 GI GD+L+VD ++ G IVIA +DGE TVK+L+ R + L+P N ++PI + +E Sbjct: 161 AGIHPGDILVVDRSLQPESGQIVIAVLDGELTVKRLEKRAGKLFLMPANRNFTPIEVGAE 220 Query: 123 DTLDVFGVVIHVVKAM 138 L ++GVV V Sbjct: 221 ADLLIWGVVTSTVHQF 236 >UniRef50_Q31HB9 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Bacteria RepID=Q31HB9_THICR Length = 206 Score = 177 bits (450), Expect = 9e-44, Method: Composition-based stats. Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 1/138 (0%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L I+ + E V PL S V GFPSPA DYVE R+DLN LIQ+ AT+ + GDSM Sbjct: 69 LQIQLPEFNEEVLLPLHSHKVVAGFPSPADDYVETRLDLNDKLIQNKQATFLLTVQGDSM 128 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITIS 120 GI DGD+L+VD ++T G IVIAA+DGE TVK L ++ L+P N Y PI + Sbjct: 129 KKAGIQDGDILVVDRSLTPQDGKIVIAALDGELTVKTLSIKSTGTWLVPENDNYPPIPVR 188 Query: 121 SEDTLDVFGVVIHVVKAM 138 E + ++GVV +K Sbjct: 189 EESDIVIWGVVTATIKQF 206 >UniRef50_D1U468 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio aespoeensis Aspo-2 RepID=D1U468_9DELT Length = 156 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 55/130 (42%), Positives = 82/130 (63%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 PL + V GFPSPA DY+E+ +DLN+ L P AT+FV+ +GDSM I G Sbjct: 27 SAARPLPLAGEAVPAGFPSPAEDYIEKTLDLNEYLAPRPEATFFVRVAGDSMTGASIHHG 86 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 D+L+VD ++T + G++VIA +DG FTVK+LQ ++L P N Y+P I+ + +++ Sbjct: 87 DILVVDRSVTPNPGNVVIACIDGGFTVKRLQRTAGGLELAPENPDYAPTPITPDTDFEIW 146 Query: 129 GVVIHVVKAM 138 GVV HV+ + Sbjct: 147 GVVRHVLHKL 156 >UniRef50_A4SWQ8 Putative prophage repressor n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 RepID=A4SWQ8_POLSQ Length = 163 Score = 177 bits (450), Expect = 1e-43, Method: Composition-based stats. Identities = 55/128 (42%), Positives = 76/128 (59%), Gaps = 1/128 (0%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 L S + GFPSPAADY E +DLN L+Q+ AT+ GDSM+ GI DGD Sbjct: 27 AYELKLLSHRISAGFPSPAADYAEDGLDLNHYLVQNKPATFMFTVKGDSMLGAGICDGDK 86 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGV 130 ++VD A+ H DIV+A VD E+T+K+L R ++L P N + PIT + L ++GV Sbjct: 87 VVVDKALKPKHKDIVVAVVDSEYTIKRLYQLRGRIELQPENPHFEPITFNEGSELQIWGV 146 Query: 131 VIHVVKAM 138 V+ VV+ Sbjct: 147 VVGVVRKY 154 >UniRef50_C5IWL3 UV repair protein n=23 Tax=root RepID=C5IWL3_ECOLX Length = 149 Score = 175 bits (446), Expect = 3e-43, Method: Composition-based stats. Identities = 74/127 (58%), Positives = 93/127 (73%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PLF + V GFPSPA DYVEQ +DLN+L I+ P+AT+FV+ GDSMID GI D+L Sbjct: 20 LRIPLFMERVSAGFPSPAQDYVEQTLDLNELCIKRPAATFFVRVEGDSMIDAGIHPDDIL 79 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 +VD ++ A HGDIVIA + GE TVK+LQLRP V+LIP N AY PI I L++FGVV Sbjct: 80 VVDRSVQAEHGDIVIAGIHGELTVKELQLRPCVKLIPRNQAYEPIHIPEGAELEIFGVVT 139 Query: 133 HVVKAMR 139 +VV+ MR Sbjct: 140 NVVRNMR 146 >UniRef50_Q1NXL8 Peptidase S24, S26A and S26B n=7 Tax=Bacteria RepID=Q1NXL8_9DELT Length = 145 Score = 174 bits (442), Expect = 7e-43, Method: Composition-based stats. Identities = 62/137 (45%), Positives = 91/137 (66%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F + +DL+ PLFS V GFPSPA DYVE ++DLNQL++ HP+AT+FV+ +GDSMI Sbjct: 13 FDRQSDLKR----PLFSCGVSAGFPSPAEDYVEGQLDLNQLMVAHPAATFFVRVAGDSMI 68 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISS 121 GI D+L+VD ++ + G +VIA ++GE TVK+L T +L+ N Y PI ++ Sbjct: 69 GAGIHHDDILVVDRSLEPTSGRVVIAVINGELTVKRLFRHNGTARLLAENPNYPPIELTE 128 Query: 122 EDTLDVFGVVIHVVKAM 138 E +V+GVV V+ ++ Sbjct: 129 EAACEVWGVVTFVIHSL 145 >UniRef50_Q7NVL0 SOS mutagenesis n=2 Tax=Chromobacterium group RepID=Q7NVL0_CHRVO Length = 198 Score = 174 bits (442), Expect = 9e-43, Method: Composition-based stats. Identities = 57/133 (42%), Positives = 80/133 (60%), Gaps = 2/133 (1%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A L E ++ PLF+ V G P PA D E IDLN L+ P T+ VK GDSM GI Sbjct: 66 AQLSE-LSLPLFAGSVPAGSPVPADDLKETDIDLNTHLVSRPGDTFMVKVKGDSMQGAGI 124 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 DGDLL+V+ + G +V+AA++GE TVK+L+ P V+L+P N AY PI + + + Sbjct: 125 HDGDLLLVERSREPRSGKVVVAALNGELTVKRLERGPAGVRLLPENPAYQPIDVPEDSSF 184 Query: 126 DVFGVVIHVVKAM 138 ++GVV V+ + Sbjct: 185 HIWGVVTSVIHKV 197 >UniRef50_Q5ZW56 SOS response transcriptional regulator n=9 Tax=Bacteria RepID=Q5ZW56_LEGPH Length = 168 Score = 172 bits (438), Expect = 3e-42, Method: Composition-based stats. Identities = 58/127 (45%), Positives = 86/127 (67%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P+F+ +Q GFPSPA DY+E +DLN I+HPS+T+ ++A+G+SM++ GI GD L Sbjct: 41 YQLPVFASKIQAGFPSPADDYIEGYLDLNTKFIKHPSSTFVLQATGESMVEAGIFSGDWL 100 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD +I S G IVIAAV+GE TVK+L + VQL+P N + PI I+ + + ++GVV Sbjct: 101 LVDRSIEPSDGRIVIAAVNGELTVKRLSKKGGRVQLLPANPKFQPIDITEDSEMVIWGVV 160 Query: 132 IHVVKAM 138 V+ + Sbjct: 161 TLVLHEL 167 >UniRef50_C1D7X6 UmuD protein n=2 Tax=Betaproteobacteria RepID=C1D7X6_LARHH Length = 206 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PA L ++ PL + V+ G PSPA DYVE +DLN LI +T+ V+A G+SM Sbjct: 73 PARLAPVLGMPLHAAGVRAGMPSPADDYVEDTLDLNHYLIDDAPSTFLVRAKGESMTGAH 132 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT 124 + DGD+L+VD + T S GDIV+AA++GEFTVK+LQ + V L N Y I S E Sbjct: 133 VFDGDILVVDKSRTPSSGDIVVAAIEGEFTVKRLQRQGGRVILKAANPDYPDIVPSYEQE 192 Query: 125 LDVFGVVIHVVKAM 138 L ++GVV V+ Sbjct: 193 LVIWGVVTGCVRRF 206 >UniRef50_Q2W5K4 SOS-response transcriptional repressors n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W5K4_MAGSA Length = 156 Score = 171 bits (435), Expect = 5e-42, Method: Composition-based stats. Identities = 51/121 (42%), Positives = 78/121 (64%), Gaps = 1/121 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P++S LV GFPSPA D++E ++DL++L+++ P+AT+F +A GDSM GI GDLL+VD Sbjct: 30 PIYSALVAAGFPSPADDHLEGKLDLHELMVKRPAATFFCRADGDSMTGAGIHSGDLLVVD 89 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 ++ GDIV+A +DG TVK L+ +L N Y ++ +D + ++GVV Sbjct: 90 RSVQPHDGDIVVATLDGGLTVKTLRKTEDGWELASANPDYPSFSVDPDDGVQIWGVVTFS 149 Query: 135 V 135 V Sbjct: 150 V 150 >UniRef50_Q5ZUT8 SOS (Error prone) mutagenesis protein UmuD (RumA) n=5 Tax=Legionellaceae RepID=Q5ZUT8_LEGPH Length = 184 Score = 170 bits (433), Expect = 8e-42, Method: Composition-based stats. Identities = 62/129 (48%), Positives = 90/129 (69%), Gaps = 1/129 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +E PL++ V+ GFPSP DY+E +DLN+ LI+HP++T+FV+ASG+SMI+ GI Sbjct: 53 EKEFPAIPLYTSSVRAGFPSPGDDYIESMLDLNEYLIKHPASTFFVRASGESMINAGIYS 112 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 GD+LIVD I A+HG IVI A++GE TVK+L + V+L+ N + PI I+ E + + Sbjct: 113 GDILIVDRGIEATHGKIVIVALNGELTVKRLSRQHGQVKLLAENPDFPPIDITEEYDMVI 172 Query: 128 FGVVIHVVK 136 +GVV HV+ Sbjct: 173 WGVVTHVIH 181 >UniRef50_Q3B3L8 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Chlorobiaceae RepID=Q3B3L8_PELLD Length = 212 Score = 170 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 60/134 (44%), Positives = 88/134 (65%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 ADL + PL V GFPSPA D++E +DLN+ L++HP AT++ + G SMI+ GI Sbjct: 79 ADLSVPLPLPLAETAVSAGFPSPAEDHLEVTLDLNRALVRHPDATFYARVKGSSMIEAGI 138 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTL 125 ++GD+L++D ++ A GDI + +DGEFTVK++ + V L+P NSAYSPI I E Sbjct: 139 AEGDILVIDRSLDAKEGDIALCFLDGEFTVKRIAMDDGVLMLMPENSAYSPIRIGEESDF 198 Query: 126 DVFGVVIHVVKAMR 139 V+G+V +V+ R Sbjct: 199 QVWGIVTYVIHKSR 212 >UniRef50_Q6ZEK7 Sll5123 protein n=4 Tax=Cyanobacteria RepID=Q6ZEK7_SYNY3 Length = 144 Score = 170 bits (433), Expect = 9e-42, Method: Composition-based stats. Identities = 59/130 (45%), Positives = 86/130 (66%), Gaps = 1/130 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R + PL++ V GFPSPA DY+E ++DLNQ LI+HP+AT+FV+ +GDSMI GI G Sbjct: 15 RTVYELPLYACPVSAGFPSPAEDYLEGKLDLNQYLIKHPAATFFVRVTGDSMIGAGIHAG 74 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D+LIVD ++ G +VIA V+GE VK+L++ + L NS Y P+ I+ +V+ Sbjct: 75 DILIVDRSLEPRDGKVVIAVVNGELLVKRLRMEKQKIYLASENSDYPPLVITDLMDFEVW 134 Query: 129 GVVIHVVKAM 138 GVV +V+ + Sbjct: 135 GVVTNVIHPL 144 >UniRef50_Q0ACZ4 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Betaproteobacteria RepID=Q0ACZ4_NITEC Length = 147 Score = 169 bits (430), Expect = 2e-41, Method: Composition-based stats. Identities = 61/134 (45%), Positives = 81/134 (60%), Gaps = 2/134 (1%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P + E V PL+S V+ GFPSPA D++ +RIDL+ LI+HP AT+ ++ G SM G Sbjct: 15 PVQVGEPVYIPLYSG-VRAGFPSPADDFLLKRIDLSNELIKHPEATFLMRIKGHSMTMAG 73 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDT 124 I DGD+++VD A+ HG IVIA VDGEFT K+L L +L P N Y I Sbjct: 74 IDDGDIVVVDKAVKPEHGKIVIACVDGEFTCKRLYLLDGETRLQPANPDYKDIIFKDGQI 133 Query: 125 LDVFGVVIHVVKAM 138 L+V+GVV +K Sbjct: 134 LEVWGVVTSCIKQF 147 >UniRef50_B4WV08 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WV08_9SYNE Length = 142 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 1/126 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S V GFPSPA D+++ I+LN+ LI HPSAT+ V+A G SM+ GI DLLIV Sbjct: 17 LPLYSCPVSAGFPSPATDHLDGHINLNEHLIPHPSATFLVRADGWSMVGEGIHHEDLLIV 76 Query: 75 DSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D + HG +V+AA+DGE TVKKL Q L+ N Y I + + + ++GVVIH Sbjct: 77 DRSEEPRHGRVVVAAIDGELTVKKLCQKEQQTFLMAANPDYPSIELGEDADVRIWGVVIH 136 Query: 134 VVKAMR 139 ++++MR Sbjct: 137 IIRSMR 142 >UniRef50_A0KH65 Protein UmuD n=2 Tax=Gammaproteobacteria RepID=A0KH65_AERHH Length = 147 Score = 169 bits (429), Expect = 2e-41, Method: Composition-based stats. Identities = 66/139 (47%), Positives = 94/139 (67%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M + VT PLF CGFPSPA+DY+E ++DLN + HP+AT++++A G+S Sbjct: 1 MTLLTQDPSPAEVTIPLFLHRASCGFPSPASDYLEGKLDLNTHCVPHPAATFYLRAEGES 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M GI GDLL+VD ++T HGD+VIA +DG FTVK LQL+P ++L+P N A++PI Sbjct: 61 MTRVGIFPGDLLVVDKSLTPRHGDVVIALLDGGFTVKTLQLKPRLRLLPANPAFAPIDPC 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +L++FGVV HV+ +R Sbjct: 121 MSLSLELFGVVTHVIGNLR 139 >UniRef50_A6UXG1 Protein MucA n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6UXG1_PSEA7 Length = 147 Score = 169 bits (429), Expect = 3e-41, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 1/132 (0%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 R + PLF V GFPSPA D++E + L++L + HP+AT+F++ GDSM GI Sbjct: 13 PSRPGLRLPLFLSRVAAGFPSPAEDHIEASLSLDELCVVHPAATFFLRVVGDSMTGLGIF 72 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLD 126 DGD+L+VD +IT G +V+A V+GEFT K+L L N AY I + + L+ Sbjct: 73 DGDILVVDRSITPRAGMVVVAVVNGEFTCKQLAYEHGAPVLRAANKAYPDIRLRDGEDLE 132 Query: 127 VFGVVIHVVKAM 138 VFGVV + + Sbjct: 133 VFGVVTRCIHKL 144 >UniRef50_C7RB83 Peptidase S24 and S26 domain protein n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RB83_KANKD Length = 140 Score = 169 bits (428), Expect = 3e-41, Method: Composition-based stats. Identities = 52/125 (41%), Positives = 79/125 (63%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL+S + GFP +++E + L+QLLIQ+P+ T+F K GDSMI GI D+L+V Sbjct: 16 IPLYSGKISAGFPGVVDEHMEDTLSLDQLLIQNPATTFFAKVEGDSMIGAGIFQNDILVV 75 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 D ++TA D+V+A +D EFTVK+L ++L N AY I I+ E L ++GVV + Sbjct: 76 DRSLTAKDKDVVVAMLDNEFTVKRLCTSGALRLQAENPAYQDILITGESELVIWGVVTGL 135 Query: 135 VKAMR 139 +++R Sbjct: 136 ARSLR 140 >UniRef50_D1PC11 UmuD protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PC11_9BACT Length = 152 Score = 168 bits (427), Expect = 5e-41, Method: Composition-based stats. Identities = 62/140 (44%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L PA+ + PL V+ GFPSPA DY+E IDLN +L++H AT++V+ SGDSM Sbjct: 11 LTFHPAEFGAKMPIPLAEQSVKAGFPSPAQDYMEGEIDLNDILVRHREATFYVRISGDSM 70 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---VQLIPMNSAYSPIT 118 D GI DGDL +VD I S+G+ VIA VDGEFT+K+ ++ + LIP N +SPI Sbjct: 71 QDAGILDGDLAVVDRQIEPSNGNFVIAFVDGEFTIKQFKIDESGTFGWLIPWNKNFSPIR 130 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + + ++GVV +V+ + Sbjct: 131 VDETNRFMIWGVVTYVIHQI 150 >UniRef50_Q30X28 UmuD protein. Serine peptidase. MEROPS family S24 n=4 Tax=Bacteria RepID=Q30X28_DESDG Length = 208 Score = 167 bits (424), Expect = 9e-41, Method: Composition-based stats. Identities = 54/124 (43%), Positives = 83/124 (66%), Gaps = 1/124 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL V GFPSPA DY+++R+DLN+ L+++P +T++V+ G+SM D GI GD+L+VD Sbjct: 85 PLMLSCVAAGFPSPADDYIDRRLDLNEYLVRNPESTFYVRVHGESMRDAGIWAGDILVVD 144 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A+ + G +VIA +DGE TVK+L+ + L+P N YSP+ +S + V+GVV V Sbjct: 145 RAVQPATGRVVIAVLDGELTVKRLKKEGDRLLLVPENPDYSPVDVSGREDFSVWGVVTCV 204 Query: 135 VKAM 138 + + Sbjct: 205 LHRV 208 >UniRef50_A1VAL5 UmuD protein. Serine peptidase. MEROPS family S24 n=7 Tax=cellular organisms RepID=A1VAL5_DESVV Length = 202 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 62/134 (46%), Positives = 91/134 (67%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P ++ PL V GFPSPA DY+++ +DLN +++HP+AT++V+ASG+SM+ G Sbjct: 69 PVKDPPRLSRPLMLSRVAAGFPSPADDYIDRSLDLNDHIVKHPAATFYVRASGESMLGAG 128 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT 124 + DGDLL+VD A+ G +VIAAVDGE TVK+L + L P N+AY P+ I+ + Sbjct: 129 VHDGDLLVVDRALDPRPGRVVIAAVDGELTVKRLVREGGRLLLAPENAAYPPLDITGRED 188 Query: 125 LDVFGVVIHVVKAM 138 ++V+GVV HVV A+ Sbjct: 189 VEVWGVVTHVVHAL 202 >UniRef50_Q31B22 UmuD protein. Serine peptidase. MEROPS family S24 n=8 Tax=Prochlorococcus marinus RepID=Q31B22_PROM9 Length = 138 Score = 167 bits (423), Expect = 1e-40, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 81/131 (61%), Gaps = 1/131 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + PL +D V GFPSPA DY E+ IDLN+ LI +P +T+F++ GDSMI+ GI D Sbjct: 7 TTKKFKIPLLNDSVSAGFPSPADDYTEENIDLNEHLISNPFSTFFLRVRGDSMINAGIKD 66 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDV 127 DL+IVD ++TA G+I+IA +DGEFT+K+L + L N Y + + + Sbjct: 67 KDLIIVDKSLTAKPGNIIIAMIDGEFTIKRLSIKNDELYLKAENHNYPDFRFKNHIDVQI 126 Query: 128 FGVVIHVVKAM 138 +GVVI+ + + Sbjct: 127 WGVVIYSIHSY 137 >UniRef50_B6BWB2 LexA/MucA/RumA/RuvA family protein n=1 Tax=beta proteobacterium KB13 RepID=B6BWB2_9PROT Length = 194 Score = 166 bits (422), Expect = 2e-40, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 1/132 (0%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +++ + LFS V GFPSPA D+ E R+DLN+ LI AT+FV+ GDSMID GI D Sbjct: 63 VQKPLPITLFSHKVPAGFPSPADDHAESRLDLNEYLISQTEATFFVRIKGDSMIDAGILD 122 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDV 127 D++IVD + +AS DIV+A++DGEFTVK L L+P N + PI I ++ Sbjct: 123 NDIVIVDRSKSASINDIVLASIDGEFTVKVLAKNNKRPYLMPANKEFKPIYIEEGSQFEI 182 Query: 128 FGVVIHVVKAMR 139 +GVV V+ + Sbjct: 183 WGVVTGSVRKFK 194 >UniRef50_C8X193 Peptidase S24, S26A and S26B, conserved region n=3 Tax=Proteobacteria RepID=C8X193_DESRD Length = 148 Score = 165 bits (419), Expect = 3e-40, Method: Composition-based stats. Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 1/124 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL++ V GFPSPA D++++ +DL++ LI + +AT+ V+ SGDSM GI DGD+L+VD Sbjct: 25 PLYTARVPAGFPSPADDHLDRPLDLHEYLISNEAATFMVRVSGDSMSGAGILDGDILVVD 84 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 +++ G IV+A +DGE TVK+L R +L + Y P+T+ E V+GVV V Sbjct: 85 RSLSPRTGHIVVAVLDGELTVKRLTRRGEQWRLEAAHDGYPPLTVRPEQEFLVWGVVAGV 144 Query: 135 VKAM 138 V+ + Sbjct: 145 VRRL 148 >UniRef50_C6N6J8 Putative uncharacterized protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6N6J8_9GAMM Length = 182 Score = 165 bits (418), Expect = 5e-40, Method: Composition-based stats. Identities = 67/136 (49%), Positives = 93/136 (68%), Gaps = 3/136 (2%) Query: 4 IKP--ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 IKP AD + PL++ VQ GFPSPA DYVE +DLNQ LI+HPSAT+ + A+G+SM Sbjct: 44 IKPFLADEYTTYSIPLYASKVQAGFPSPADDYVECSLDLNQALIRHPSATFILIAAGESM 103 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITIS 120 ID GI GD LIVD ++ A G IVIAA++GE TVK+L + VQL+P N + I I+ Sbjct: 104 IDAGIHPGDKLIVDRSVEAVDGKIVIAALEGELTVKRLSRKANRVQLLPANPKFKSIDIT 163 Query: 121 SEDTLDVFGVVIHVVK 136 + + ++GVV++++ Sbjct: 164 EDSEMVIWGVVMNIIH 179 >UniRef50_C9PZS8 SOS mutagenesis and repair protein UmuD n=2 Tax=Prevotella RepID=C9PZS8_9BACT Length = 146 Score = 164 bits (417), Expect = 6e-40, Method: Composition-based stats. Identities = 51/142 (35%), Positives = 88/142 (61%), Gaps = 5/142 (3%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 + I + E + P+ ++ ++ GFPSPA DY+ + +D N+ LI++P AT++ + GDSM Sbjct: 4 IQILQGNFNEKLKLPI-AEGLKAGFPSPAEDYLHETLDFNRDLIRNPEATFYGRVEGDSM 62 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL----QLRPTVQLIPMNSAYSPI 117 I+ GI DGD+ ++D ++ GD+V+ ++ EFT+K L + ++L P N + PI Sbjct: 63 IEAGICDGDIAVIDRSLEPRDGDVVVGYINEEFTIKYLDLCHREEGYIELRPANPNFCPI 122 Query: 118 TISSEDTLDVFGVVIHVVKAMR 139 I +D+ +V+GVVI +K R Sbjct: 123 RIDEDDSFEVWGVVIWTIKNWR 144 >UniRef50_P23831 Protein samA' n=26 Tax=Enterobacteriaceae RepID=SAMA_SALTY Length = 140 Score = 164 bits (416), Expect = 8e-40, Method: Composition-based stats. Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 3/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L + P T PLF++ GFPSPAADY E+ +DLN I+ P+AT+FV+A GDS Sbjct: 2 LLLVAPEQEPVQSTAPLFTERCPAGFPSPAADYTEEELDLNAYCIRRPAATFFVRAIGDS 61 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M + G+ GDL++VD A GDIVIA DGEFTVK+LQL+P + L+P+N AY + Sbjct: 62 MKEMGLHSGDLMVVDKAEKPMQGDIVIAETDGEFTVKRLQLKPRIALLPINPAYPTLYP- 120 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + L +FGVV + R Sbjct: 121 --EELQIFGVVTAFIHKTR 137 >UniRef50_B4WQT5 Peptidase S24-like domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WQT5_9SYNE Length = 156 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 55/127 (43%), Positives = 78/127 (61%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL+S + GFPSPA DY+E+ +DLN LI++P+AT+F +A GDSM GGI DGDLL Sbjct: 26 VELPLYSCRLSAGFPSPADDYIEKTLDLNAHLIENPAATFFARACGDSMEPGGIFDGDLL 85 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 I+D +I +G +V+ A++GE VK+L L N Y PI ++ + +GVV Sbjct: 86 IIDRSIEPRNGRVVVVALNGEMLVKRLHTTLDRTVLSADNRNYPPIEVTEFCSFHFWGVV 145 Query: 132 IHVVKAM 138 + M Sbjct: 146 KASIHMM 152 >UniRef50_Q0I9R1 UmuD protein n=12 Tax=Cyanobacteria RepID=Q0I9R1_SYNS3 Length = 147 Score = 164 bits (416), Expect = 9e-40, Method: Composition-based stats. Identities = 56/142 (39%), Positives = 86/142 (60%), Gaps = 5/142 (3%) Query: 2 LFIKPADL----REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKAS 57 + ++P RE + PL D + GFPSPA DY++ IDLN+ LI+HPS+T+F++ S Sbjct: 6 ISLEPPQPLRLQRESLCLPLAHDQIAAGFPSPADDYIDVGIDLNEQLIRHPSSTFFLRVS 65 Query: 58 GDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSP 116 GDSM GI GDLL+VD ++ G +V+A +DG FT+K+L R ++L N Y Sbjct: 66 GDSMTGEGIHHGDLLVVDRSLDPHPGRVVVAILDGAFTLKRLVRHRGHLRLEAANPDYPH 125 Query: 117 ITISSEDTLDVFGVVIHVVKAM 138 + + + ++GV IHV+ + Sbjct: 126 LDLHHCGDVQIWGVAIHVIHPL 147 >UniRef50_A1WWJ0 UmuD protein. Serine peptidase. MEROPS family S24 n=3 Tax=Gammaproteobacteria RepID=A1WWJ0_HALHL Length = 142 Score = 163 bits (414), Expect = 1e-39, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 97/133 (72%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + PLF + V GFPSPA DYV++ +DLN+L I+HP+ATYFV+A+G+SM+ GI Sbjct: 10 AREPAALRRPLFLERVAAGFPSPAQDYVDRALDLNELCIEHPAATYFVRAAGESMLGVGI 69 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 GD+L+VD A+ A H DIVIAA GE TVK+L+LRPT++L+ N A+ PI I+ + L+ Sbjct: 70 HPGDVLVVDRALEARHRDIVIAAWQGELTVKRLELRPTLRLVAENDAFPPIDIAEPEMLE 129 Query: 127 VFGVVIHVVKAMR 139 +FGVV V+ A+R Sbjct: 130 IFGVVTFVIHALR 142 >UniRef50_UPI0000E87F9F putative prophage repressor n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87F9F Length = 191 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 65/141 (46%), Positives = 86/141 (60%), Gaps = 6/141 (4%) Query: 2 LFIKPADLREIVTFPL--FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 +F P++L PL FS V GFPSPA D+VE+R+DLN LI AT+FV GD Sbjct: 54 IFTAPSELGSQ---PLAWFSHKVPAGFPSPADDHVEKRLDLNDYLIAQKEATFFVSIKGD 110 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPIT 118 SMID I DGD++IVD + A GDIV+A++DGEFTVK L +L+P NS Y I Sbjct: 111 SMIDASIHDGDIVIVDRSKDAKIGDIVLASIDGEFTVKTLAKHLSHPRLLPANSEYKYID 170 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I+ +++GVV V+ + Sbjct: 171 ITEGMVFEIWGVVTGAVRKFK 191 >UniRef50_C9Y501 Protein umuD n=2 Tax=Cronobacter RepID=C9Y501_CROTZ Length = 143 Score = 163 bits (413), Expect = 2e-39, Method: Composition-based stats. Identities = 70/139 (50%), Positives = 95/139 (68%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ML ++ + PLF + V CGFPSPA DYVE+R+ L+ I HP+ATYF++ASG+S Sbjct: 5 MLMMRLLPQPDAEGLPLFLEKVACGFPSPAQDYVEKRVSLDAHCIVHPNATYFLRASGES 64 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M GI DGDLL+VDSA+ DIV+AA++GEFTVK L+L P QL+PMN ++PI + Sbjct: 65 MNGAGIEDGDLLVVDSALKPQENDIVVAALEGEFTVKTLRLHPVAQLVPMNPDFAPIPLV 124 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + + +FGVV V+K R Sbjct: 125 GDADVVIFGVVTWVLKKRR 143 >UniRef50_B5JVF2 Protein ImpA n=2 Tax=Proteobacteria RepID=B5JVF2_9GAMM Length = 160 Score = 162 bits (412), Expect = 3e-39, Method: Composition-based stats. Identities = 54/134 (40%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D + P+ +Q GFPSPA D++E R+DLN LLI P+AT++++ GDSM D G+ Sbjct: 22 PDFGSRMPLPVAGYSIQGGFPSPAEDFLESRLDLNDLLIARPAATFYLRYQGDSMRDAGL 81 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTL 125 GD+L+VD A + HGDIV+A VDGE T K+L ++L + + I + + L Sbjct: 82 HPGDILVVDRAESPRHGDIVVAVVDGEMTCKRLYNRAGLIRLDAEHPEFPNIELRQDSEL 141 Query: 126 DVFGVVIHVVKAMR 139 ++GVV VK + Sbjct: 142 VIWGVVTAAVKRFK 155 >UniRef50_C6XE76 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XE76_METSD Length = 148 Score = 162 bits (411), Expect = 3e-39, Method: Composition-based stats. Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 11/146 (7%) Query: 1 MLFIKPADLREIV--------TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATY 52 ++ ++PA++ I+ PL+ + V GFPSPAAD+VE R+ + L+ +P+ATY Sbjct: 5 IISLQPANVTAIMAHHPGVYPPMPLYDNPVAAGFPSPAADHVEDRLSADDYLVGNPTATY 64 Query: 53 FVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNS 112 FV+ GDSMID GI DGD+L+VD +IT S G +V+A +DGEFTVK L QL+P N Sbjct: 65 FVRVKGDSMIDAGIFDGDVLVVDRSITPSIGHVVLAELDGEFTVKYL---GRGQLLPANP 121 Query: 113 AYSPITISSEDTLDVFGVVIHVVKAM 138 AY PI T+++ GVV ++ Sbjct: 122 AYQPIKFKDGQTVEIVGVVTGSMRRF 147 >UniRef50_C8T455 SOS mutagenesis and repair protein UmuD n=2 Tax=Enterobacteriaceae RepID=C8T455_KLEPR Length = 148 Score = 161 bits (408), Expect = 7e-39, Method: Composition-based stats. Identities = 74/139 (53%), Positives = 92/139 (66%), Gaps = 4/139 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L + P + PLFS+ GFPSPA DYVEQ +DLN L I+HPSATYF++ASG+S Sbjct: 11 VLQVHPQTPAR-LAIPLFSEACPAGFPSPAGDYVEQELDLNTLCIRHPSATYFLRASGES 69 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITIS 120 M D G+ DGD+LIVD A TA GDIVIA +D FTVK+L+LRP L PMN Y + Sbjct: 70 MRDIGLHDGDILIVDRAETAQEGDIVIAEIDRGFTVKRLRLRPRPALEPMNPDYPTLYP- 128 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +TL +FGVV H + R Sbjct: 129 --ETLTLFGVVTHFIHRTR 145 >UniRef50_A3YBK7 UmuD protein; UmuD' protein n=3 Tax=Marinomonas RepID=A3YBK7_9GAMM Length = 149 Score = 160 bits (407), Expect = 8e-39, Method: Composition-based stats. Identities = 67/129 (51%), Positives = 91/129 (70%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 V P + + V GFPSPA D++E+++DLN L I+HP AT+FV+ G+SM + GI + D Sbjct: 18 NSVQIPFYVEPVSAGFPSPADDFIERKLDLNALCIKHPEATFFVRVQGESMSEAGIYNHD 77 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 +LIVD ++TA HGD VIA + GE TVK+L L+P V L P N AY+ I I+ E LDVFGV Sbjct: 78 VLIVDRSLTARHGDFVIACIHGEMTVKELVLKPNVALRPKNKAYAAIAITEESELDVFGV 137 Query: 131 VIHVVKAMR 139 VI VV+ ++ Sbjct: 138 VISVVRNIQ 146 >UniRef50_C6P5S9 Peptidase S24 and S26 domain protein n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P5S9_9PROT Length = 159 Score = 160 bits (405), Expect = 2e-38, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 78/123 (63%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVE+R+ L++ LIQH +T+F++ +G SM D GI DGDLL+VD Sbjct: 37 LLRKAVPAGFPSPADDYVERRLSLDEHLIQHRESTFFMRVAGHSMRDLGIFDGDLLVVDR 96 Query: 77 AITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++ A+HG +V+A +DGEFTVK+ L L + Y I I++E ++GVV V Sbjct: 97 SVPATHGCVVVAVIDGEFTVKQLLYTAQGKVLRAAHPDYPDIAITAEHDFSIWGVVQWNV 156 Query: 136 KAM 138 + Sbjct: 157 HKV 159 >UniRef50_Q8L2B9 UV protection and mutation protein n=2 Tax=Enterobacteriaceae RepID=Q8L2B9_PROVU Length = 138 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 69/131 (52%), Positives = 93/131 (70%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +L + P F L+ GFPSPA+DY + IDLN+LLI HP+ TYF++ SG SMID I Sbjct: 6 CELPAGIKLPFFEALIPAGFPSPASDYSKNNIDLNELLITHPAGTYFLRVSGTSMIDANI 65 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLD 126 SDGD++IVDS++ A+ G+IVIA++DGEFTVK+LQ P LIPMN +SPI I S + Sbjct: 66 SDGDIVIVDSSLQANDGNIVIASIDGEFTVKQLQKTPFPALIPMNPDFSPIPIPSGSEFN 125 Query: 127 VFGVVIHVVKA 137 +FGVV +++ Sbjct: 126 LFGVVTYIIHK 136 >UniRef50_C6BX74 Peptidase S24 and S26 domain protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BX74_DESAD Length = 144 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 51/132 (38%), Positives = 85/132 (64%), Gaps = 1/132 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + PL V GFPSPA DY+++++DLN+ LI + +AT+ ++A GDSMID I Sbjct: 11 PEAANKIELPLLLSEVIAGFPSPADDYIDKKMDLNEHLISNKAATFLIRAYGDSMIDANI 70 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTL 125 +GD+L+VD ++ A + I+IA +GE TVK+++ R + L+P N Y + I+ E + Sbjct: 71 KEGDILVVDRSMDAHNNSIIIAIFNGELTVKRIKQRAGRLFLLPENPEYPLLEITEETSF 130 Query: 126 DVFGVVIHVVKA 137 +V+GVV +++ Sbjct: 131 EVWGVVTYIIHK 142 >UniRef50_B7JBK7 UmuD protein n=2 Tax=Acidithiobacillus RepID=B7JBK7_ACIF2 Length = 164 Score = 159 bits (404), Expect = 2e-38, Method: Composition-based stats. Identities = 56/126 (44%), Positives = 78/126 (61%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P + GFPSPA YVEQ+IDLN LIQH AT+ ++ SG SM D GI DGD ++ Sbjct: 39 TLPFMVSRIAAGFPSPADGYVEQQIDLNTHLIQHREATFILRVSGWSMRDVGIFDGDEIL 98 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD AIT G IV+AA++G+ TVK+L+ + V L+ N + I + + L ++GVV Sbjct: 99 VDRAITPVDGKIVVAAINGDLTVKRLRRIGSAVHLVAENPEFPTIILKEGEELCIWGVVT 158 Query: 133 HVVKAM 138 V+ + Sbjct: 159 RVLHRV 164 >UniRef50_C9Y1S5 Protein umuD n=1 Tax=Cronobacter turicensis RepID=C9Y1S5_CROTZ Length = 155 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 66/140 (47%), Positives = 88/140 (62%), Gaps = 1/140 (0%) Query: 1 MLFIKP-ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 ++ I P V P ++DL+ GFPSPAADY++ IDL LI HPS+TY ++ +GD Sbjct: 10 IMKIHPLVWPVTPVNIPFYADLISAGFPSPAADYIDSGIDLVSHLIAHPSSTYVLRVAGD 69 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITI 119 SM D GI DG LL+VD ++ A H DIV+A + GEFTVK+L P QL N AY PI + Sbjct: 70 SMRDAGILDGSLLLVDFSLHAKHNDIVVANIGGEFTVKRLVTYPVAQLRAENPAYPPIAV 129 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 D L++ GVVI V+ + Sbjct: 130 YDADDLEIVGVVICVINTLH 149 >UniRef50_C6WTX3 Peptidase S24 and S26 domain protein n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTX3_METML Length = 205 Score = 159 bits (403), Expect = 3e-38, Method: Composition-based stats. Identities = 63/141 (44%), Positives = 83/141 (58%), Gaps = 4/141 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F PA E + PLFS V G PSPA D++EQR+D N+ LI T+FV G SM+ Sbjct: 65 FELPALETESMELPLFSSKVSAGLPSPAEDHLEQRLDPNEFLIDKKDTTFFVTIQGYSMV 124 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNS--AYSPIT 118 D G+ GD +VD A AS GDIV+A +DGEFT+K L V+L+P NS Y+PI Sbjct: 125 DVGLLPGDKAVVDRAKIASIGDIVLAVIDGEFTIKTLSRSKEGNVRLLPANSSADYAPIN 184 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I+ E +V+GVV + + Sbjct: 185 ITEEMNFEVWGVVTGSFRRFK 205 >UniRef50_C6XDV3 Peptidase S24 and S26 domain protein n=2 Tax=Methylovorus sp. SIP3-4 RepID=C6XDV3_METSD Length = 153 Score = 159 bits (402), Expect = 3e-38, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 80/125 (64%), Gaps = 4/125 (3%) Query: 16 PLFSDLVQCG---FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P++S V+ G FPSPA DY + +DLN+ L+++P AT+F SGDSMI GI +G L Sbjct: 26 PIYSGKVRAGQSRFPSPAQDYEQAELDLNKRLVRNPPATFFFTVSGDSMIGAGIFEGSTL 85 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVFGVV 131 +VD +I A IV+A V+GE VK+L R V L+ N AY+PIT++ L ++GVV Sbjct: 86 VVDRSIKAKSTSIVVAMVEGELMVKRLYKRGAVVKLLSDNPAYAPITLTEGQELIIWGVV 145 Query: 132 IHVVK 136 +V+ Sbjct: 146 TYVIN 150 >UniRef50_P0A276 Protein mucA' n=25 Tax=root RepID=MUCA_ECOLX Length = 146 Score = 158 bits (401), Expect = 5e-38, Method: Composition-based stats. Identities = 56/127 (44%), Positives = 85/127 (66%), Gaps = 1/127 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + + P + + GFPSPA Y +Q ++L++ ++HPSATYF++ SG SM DG I DG Sbjct: 12 SRVHSIPFYLQRISAGFPSPAQGYEKQELNLHEYCVRHPSATYFLRVSGSSMEDGRIHDG 71 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDT-LDVF 128 D+L+VD ++TASHG IV+A + EFTVK+L LRP L+PMN + I ++ ++++ Sbjct: 72 DVLVVDRSLTASHGSIVVACIHNEFTVKRLLLRPRPCLMPMNKDFPVYYIDPDNESVEIW 131 Query: 129 GVVIHVV 135 GVV H + Sbjct: 132 GVVTHSL 138 >UniRef50_Q5NWB9 DNA repair protein n=2 Tax=Rhodocyclaceae RepID=Q5NWB9_AZOSE Length = 158 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P+ R + PL V GFPSPA DY ++++D+N L+++P +T++ GDSM Sbjct: 23 PSPTRGCLAIPLGLAPVSAGFPSPAEDYEDKKLDINDYLVRNPVSTFYFPVKGDSMQGAQ 82 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 + DGD+L+VD ++ +HG +VIA V+GE VK+ R + L+ N Y P+ ++ Sbjct: 83 VFDGDILVVDRSVMPAHGHVVIAFVNGERLVKRFHRRGDRIALLAENPGYPPLELTEGSE 142 Query: 125 LDVFGVVIHVVKAM 138 L ++GVVI + Sbjct: 143 LVIWGVVIGKFSRI 156 >UniRef50_C5T315 Peptidase S24 and S26 domain protein n=4 Tax=cellular organisms RepID=C5T315_ACIDE Length = 148 Score = 158 bits (400), Expect = 5e-38, Method: Composition-based stats. Identities = 59/124 (47%), Positives = 75/124 (60%), Gaps = 1/124 (0%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL V+ GFPSPA D+V +R+D+ QLL++HP ATYF + GDSM D GI DG ++ V Sbjct: 22 LPLCGVSVRAGFPSPADDFVVERLDIMQLLVKHPQATYFWRVRGDSMRDAGIEDGSIIAV 81 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D AI H IV+A VDGE TVK L R ++L N Y I T++V+GVV Sbjct: 82 DRAIKPKHNSIVVAIVDGECTVKYLHQRAGRIKLRAANPTYPDIIPRDSQTIEVWGVVSG 141 Query: 134 VVKA 137 VK Sbjct: 142 CVKR 145 >UniRef50_A8GF16 Peptidase S24 and S26 domain protein n=1 Tax=Serratia proteamaculans 568 RepID=A8GF16_SERP5 Length = 140 Score = 158 bits (400), Expect = 6e-38, Method: Composition-based stats. Identities = 70/135 (51%), Positives = 92/135 (68%), Gaps = 1/135 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P E PL++D V GFPSPA DY+ RIDLN+ I HPSATYF+ ASG+SMI+ G Sbjct: 6 PTPTPEKQFIPLYADNVPAGFPSPAQDYIHARIDLNEYCISHPSATYFLIASGESMIEAG 65 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSE-DT 124 I+DG +L+VD +I A HGDIVIA++ GEFTVK+L L P QL PMN + PI + + Sbjct: 66 ITDGSMLVVDRSIGACHGDIVIASIAGEFTVKRLCLHPVKQLEPMNPTFRPIPLPDDGAE 125 Query: 125 LDVFGVVIHVVKAMR 139 LD+ GVV+ + ++ Sbjct: 126 LDIVGVVVSTITRLK 140 >UniRef50_Q0VP67 LexA repressor n=9 Tax=Gammaproteobacteria RepID=Q0VP67_ALCBS Length = 163 Score = 157 bits (398), Expect = 9e-38, Method: Composition-based stats. Identities = 63/126 (50%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 + P FS+ V GFPSPA Y+++ +DLN+L I+HP++T+ ++ GDSM+D GI GD+LI Sbjct: 30 SLPFFSEPVSAGFPSPAQGYLDEHLDLNRLCIRHPASTFLLRVEGDSMVDAGIYSGDILI 89 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 VD ++ A GD+V+A+++GEFTVK+LQL P L P N+AY+PI I E+ LD+FGVV Sbjct: 90 VDRSLEAVAGDVVVASLEGEFTVKELQLLPVPMLKPRNAAYAPILI-GEEGLDLFGVVTF 148 Query: 134 VVKAMR 139 + +R Sbjct: 149 SLHTLR 154 >UniRef50_C5V5B2 Peptidase S24 and S26 domain protein n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5B2_9PROT Length = 153 Score = 157 bits (398), Expect = 1e-37, Method: Composition-based stats. Identities = 55/123 (44%), Positives = 72/123 (58%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L V GFPSPA DYVEQRI L++ LI +T+F++ +G+SM GI DGDLL+VD Sbjct: 31 LLRRAVPAGFPSPADDYVEQRISLDEHLIGRRESTFFMRVAGESMRGLGIFDGDLLVVDR 90 Query: 77 AITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ A+ G +VIA VDGEFTVK+ L L + Y + I E ++GVV V Sbjct: 91 ALPATSGCVVIAVVDGEFTVKQLLHTSDGPVLRAAHPDYDDMRIQPEQDFSIWGVVSWNV 150 Query: 136 KAM 138 Sbjct: 151 HKH 153 >UniRef50_A8U3Z8 SOS-response transcriptional repressor n=2 Tax=Alphaproteobacteria RepID=A8U3Z8_9PROT Length = 147 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 59/132 (44%), Positives = 85/132 (64%), Gaps = 2/132 (1%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D + L++ V GFPSPA D+++ ++DL+ LI+ P+AT+FV+A G+SM D G+ Sbjct: 14 DKPSHLALVLYASRVSAGFPSPADDHLDGKLDLSLHLIRRPAATFFVRAQGESMRDAGLF 73 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLD 126 DGDLLIVD AIT DIVIAAV+GE TVK+L+ + T L N +S I + + + Sbjct: 74 DGDLLIVDRAITPQVSDIVIAAVNGELTVKRLKKLQGTWALSAENPEFSDIHL-GDAGCE 132 Query: 127 VFGVVIHVVKAM 138 V+GVV H ++ Sbjct: 133 VWGVVTHSIRQH 144 >UniRef50_Q11V04 UmuD protein. Serine peptidase. MEROPS family S24 n=14 Tax=Bacteroidetes RepID=Q11V04_CYTH3 Length = 142 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 51/140 (36%), Positives = 85/140 (60%), Gaps = 3/140 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M+ + D P SD + CGFPSPA DY++ IDLN+ LI +P+AT+ + G+S Sbjct: 1 MIELYQIDSSTATLIPFISDKLVCGFPSPATDYLDLSIDLNRELITNPNATFCGRVKGNS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK---LQLRPTVQLIPMNSAYSPI 117 MID GI +GD+LI+D + + I + +DGEFTVK+ + + + L+P N + PI Sbjct: 61 MIDAGIEEGDVLIIDRSKELTDNSIAVCFLDGEFTVKRVKVYKSKKEIHLMPSNKNFKPI 120 Query: 118 TISSEDTLDVFGVVIHVVKA 137 ++ ++ ++G+V++ +K Sbjct: 121 IVTPDNEFTIWGIVVYTIKK 140 >UniRef50_C0GN99 Peptidase S24 and S26 domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GN99_9DELT Length = 144 Score = 156 bits (396), Expect = 2e-37, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 80/134 (59%), Gaps = 1/134 (0%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 P V P S LV GFPSPA DY+++ +DLN+ LI + +A++F++ +G+SM G Sbjct: 10 PRAESPEVLLPEVSALVPAGFPSPADDYLDRTLDLNEYLIHNQAASFFIRVAGESMQGAG 69 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDT 124 I GD+L+VD ++ +H IV+A +D E VK+L + L+P + + PI I+ Sbjct: 70 ILPGDILLVDRSVEPAHNKIVVAVLDDEMVVKRLRYRQGRGVLVPEHPGFRPIEITDAME 129 Query: 125 LDVFGVVIHVVKAM 138 ++GVV V++ + Sbjct: 130 AHIWGVVTAVIRKL 143 >UniRef50_Q2YI98 SOS-response transcriptional repressor n=1 Tax=uncultured Bacteroidetes bacterium RepID=Q2YI98_9BACT Length = 145 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 50/127 (39%), Positives = 81/127 (63%), Gaps = 4/127 (3%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L + ++ GFPSPA DY+ +D N+ LI+HP AT++ + GDSM+D GI DGD+ ++D Sbjct: 18 LIAPEIKAGFPSPAEDYLHDSLDFNRDLIRHPEATFYGRVDGDSMVDAGICDGDIAVIDR 77 Query: 77 AITASHGDIVIAAVDGEFTVKKL----QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 ++ H D+++A V+GEFT+K L + ++L P N + PI I + D +V+GVV+ Sbjct: 78 SVEPQHNDVIVAYVNGEFTIKYLDLSHKEEGFIELRPANQNFKPIRIDANDKFEVWGVVV 137 Query: 133 HVVKAMR 139 +K + Sbjct: 138 WTIKNWK 144 >UniRef50_Q7M1C0 Protein impA' n=29 Tax=Enterobacteriaceae RepID=IMPA_ECOLX Length = 145 Score = 156 bits (395), Expect = 2e-37, Method: Composition-based stats. Identities = 66/142 (46%), Positives = 89/142 (62%), Gaps = 7/142 (4%) Query: 2 LFIKPADLR--EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 ++ +PAD + PLF+D Q GFPSPA DY EQ +DLN I P+AT+F++ASG+ Sbjct: 4 VYHRPADPSGDDSYVRPLFADRCQAGFPSPATDYAEQELDLNSYCISRPAATFFLRASGE 63 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIP--MNSAYSPI 117 SM G+ +GDLL+VD A HGDIVIA +DGEFTVK+L LRP L P + + + Sbjct: 64 SMNQAGVQNGDLLVVDRAEKPQHGDIVIAEIDGEFTVKRLLLRPRPALEPVSDSPEFRTL 123 Query: 118 TISSEDTLDVFGVVIHVVKAMR 139 + + +FGVV HV+ R Sbjct: 124 YP---ENICIFGVVTHVIHRTR 142 >UniRef50_Q6F8Y7 Component of DNA polymerase V n=34 Tax=Bacteria RepID=Q6F8Y7_ACIAD Length = 203 Score = 155 bits (394), Expect = 3e-37, Method: Composition-based stats. Identities = 61/139 (43%), Positives = 84/139 (60%), Gaps = 5/139 (3%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 + +I PL ++ V G PSPA ++VEQ +DLN+ L+++ +AT+ VKA+ SM+D G Sbjct: 65 QPNPTKIYQIPLATERVAAGLPSPAQEHVEQSLDLNEYLVRNENATFIVKANSLSMLDAG 124 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-----PTVQLIPMNSAYSPITIS 120 I D LIVD +ITA GDIVIA VD EFTVK+L + P V L N + I I Sbjct: 125 IDIDDPLIVDRSITAKAGDIVIAMVDNEFTVKRLMIDHHFHPPKVWLKAENPDFQNIYID 184 Query: 121 SEDTLDVFGVVIHVVKAMR 139 L ++GVV + +K MR Sbjct: 185 EGQELVIWGVVTYNLKPMR 203 >UniRef50_C6MJ28 Peptidase S24 and S26 domain protein n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MJ28_9PROT Length = 206 Score = 155 bits (393), Expect = 4e-37, Method: Composition-based stats. Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 4/141 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F P + PLF+ V GFPSPA D+VE+R+D+++ LI H ++T+FV G+SMI Sbjct: 66 FFTPVISEQPTLLPLFATKVAAGFPSPADDHVEKRLDVSEFLIDHAASTFFVTIRGESMI 125 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNS--AYSPIT 118 D G+ D ++VD T SHGDIV+A VD EFT+K L +L+P NS AY PI Sbjct: 126 DVGLLPDDKVVVDRCKTPSHGDIVLAVVDREFTIKILDYGANKMPRLMPANSTGAYRPIY 185 Query: 119 ISSEDTLDVFGVVIHVVKAMR 139 I + ++FGVV + + Sbjct: 186 IRPDTQFEIFGVVTGSFRRFK 206 >UniRef50_B1J8T0 Peptidase S24 and S26 domain protein n=35 Tax=Pseudomonas RepID=B1J8T0_PSEPW Length = 152 Score = 154 bits (391), Expect = 6e-37, Method: Composition-based stats. Identities = 56/126 (44%), Positives = 70/126 (55%), Gaps = 1/126 (0%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL+S V GFPSPAAD++E I L+++ Y VK GDSM GI GD++I Sbjct: 25 PLPLYSFHVPAGFPSPAADHLEGHISLDEIFDLRAPHVYLVKVEGDSMQGAGIYSGDIVI 84 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 VD A HGDIVIAAV+ E K+L R V L N AY P I D L ++GVV Sbjct: 85 VDRGREAEHGDIVIAAVNCEPVCKRLHRRDAVVILKSENPAYPPRYIMEGDELVIWGVVR 144 Query: 133 HVVKAM 138 + V+ Sbjct: 145 YSVRDH 150 >UniRef50_A3M2E1 DNA polymerase V component n=2 Tax=cellular organisms RepID=A3M2E1_ACIBT Length = 167 Score = 154 bits (391), Expect = 7e-37, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 80/131 (61%), Gaps = 1/131 (0%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 I P S+ + GFPSPA DYV++ +D+N+ LI++ +AT+ VK SMI+ GI Sbjct: 34 SSIKEIPFVSERISAGFPSPAQDYVDKLMDMNEHLIRNEAATFIVKVCSLSMINAGIDIN 93 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D L+VD ++ A + DIV+A ++ EFTVK+L++ + + L N Y I + L V+ Sbjct: 94 DELVVDRSLEAKNNDIVVALIENEFTVKRLKIEGSKIWLKAENPDYQDIYFNEGQKLIVW 153 Query: 129 GVVIHVVKAMR 139 GVV ++K +R Sbjct: 154 GVVTFILKNVR 164 >UniRef50_B3E0C3 SOS-response transcriptional repressor LexA/UmuD (HTH, RecA-mediated autopeptidase) n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3E0C3_METI4 Length = 188 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 55/132 (41%), Positives = 81/132 (61%), Gaps = 4/132 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E +++PLF V GFP+PA D++E+ + L++LLI+ P+AT+FVKASG+SM GI DGD Sbjct: 55 EALSYPLFGCRVAAGFPNPADDHLEKSLSLDELLIKRPAATFFVKASGNSMEGEGIRDGD 114 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIP---MNSAYSPITISSEDTLD 126 +L+VD A +G IV+AA++GE VKKL + L + + I E L Sbjct: 115 ILVVDRAEKPKNGSIVVAAINGELVVKKLWMEAGHSWLKSVPAEGAKAFSMEIHEEVELV 174 Query: 127 VFGVVIHVVKAM 138 ++GVV V+ Sbjct: 175 IWGVVTAVIHKF 186 >UniRef50_D1VXC0 Peptidase, S24 family n=1 Tax=Prevotella timonensis CRIS 5C-B1 RepID=D1VXC0_9BACT Length = 152 Score = 154 bits (390), Expect = 9e-37, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 81/126 (64%), Gaps = 4/126 (3%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 + ++ GFPSPA DY++ RID N+ LI+HP AT++ + SGDSM+ GI DGD+ ++D A Sbjct: 19 IAPAIKAGFPSPAEDYLQDRIDFNRDLIKHPEATFYGRVSGDSMVGVGIYDGDIAVIDRA 78 Query: 78 ITASHGDIVIAAVDGEFTVKKLQ----LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 DIV+A V+GEFT+K L ++L+P N + PI + ++D +++GVV Sbjct: 79 EEPKDKDIVVAYVNGEFTLKFLNTAHAQEGYIELMPANENFKPIKVVNDDDFEIWGVVTF 138 Query: 134 VVKAMR 139 V+K + Sbjct: 139 VIKNCK 144 >UniRef50_A6DHJ2 Putative SOS mutagenesis protein UmuD n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DHJ2_9BACT Length = 127 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 54/126 (42%), Positives = 82/126 (65%), Gaps = 5/126 (3%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL V GFPSPA D+VE +++++ LI+HP A++F++ G+SM GI GD+L+VD Sbjct: 5 PLLLHSVNAGFPSPADDFVEMQLNIHDHLIKHPCASFFLRVGGESMKGAGIYPGDILVVD 64 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQ--LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 ++ A DIVIA ++GEFTVK+L+ +LI N AY+PI D ++++GVV Sbjct: 65 RSLQAQKSDIVIAIIEGEFTVKQLKFNQHGKPRLIAANRAYAPI---ECDNIEIWGVVTG 121 Query: 134 VVKAMR 139 VV+ + Sbjct: 122 VVRKYK 127 >UniRef50_C9RNT7 LexA repressor n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RNT7_FIBSS Length = 217 Score = 153 bits (388), Expect = 1e-36, Method: Composition-based stats. Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 2/130 (1%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + P+ V G P A +E + +++ + S + ++ GDSMI+ GI DG Sbjct: 88 SNTIEIPIVG-RVAAGTPILAVQNLEGTVTIDRDFLACRSDVFALRVKGDSMINAGIFDG 146 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVF 128 DL+ TA G+IV+A +D E TVK V+L P N Y PI +++ + Sbjct: 147 DLIFARQQKTADLGEIVVAQIDNEATVKYYHPSADHVELRPANPKYKPIIVNNRKDFSIA 206 Query: 129 GVVIHVVKAM 138 G VI V++ + Sbjct: 207 GRVIGVMRKV 216 >UniRef50_A8GUC2 SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=4 Tax=Bacteria RepID=A8GUC2_RICB8 Length = 139 Score = 152 bits (386), Expect = 2e-36, Method: Composition-based stats. Identities = 54/131 (41%), Positives = 81/131 (61%), Gaps = 3/131 (2%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + + PLF VQ G+PSPA Y+ +DLN LI+HP +T+FV+ +GDSMID GI + Sbjct: 11 VEKACELPLFDTKVQAGYPSPADGYMSNSLDLNSHLIKHPKSTFFVQVTGDSMIDAGIRE 70 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDV 127 DLLIVD ++ ++ IVIA ++ EFTVK+L+ + L+P N + P I + + Sbjct: 71 NDLLIVDKSLPPTNNKIVIAVINNEFTVKRLKFINDEAYLMPENKDFPPTKIENGT--YI 128 Query: 128 FGVVIHVVKAM 138 +GVV V++ Sbjct: 129 WGVVTSVIQQF 139 >UniRef50_B2ILA1 Peptidase S24 and S26 domain protein n=1 Tax=Beijerinckia indica subsp. indica ATCC 9039 RepID=B2ILA1_BEII9 Length = 149 Score = 152 bits (385), Expect = 4e-36, Method: Composition-based stats. Identities = 48/129 (37%), Positives = 76/129 (58%), Gaps = 2/129 (1%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P F + + GFPSPA DY+++ IDLN LLI++ AT+ + G SM + GI GDLL Sbjct: 18 RPLPYFLEGLCAGFPSPADDYLDESIDLNDLLIRNQPATFLWRVDGHSMREAGIFHGDLL 77 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSP-ITISSEDTLDVFGV 130 +VD ++ + GDIV+ V+GE ++K+LQ + + L N Y + + D ++++GV Sbjct: 78 VVDRSLAPADGDIVVVIVNGERSLKRLQIRKGQLTLSFENKDYPEGLALHEGDEIEIWGV 137 Query: 131 VIHVVKAMR 139 V + R Sbjct: 138 VRCSIHWHR 146 >UniRef50_Q3A3S5 LexA repressor n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=LEXA_PELCD Length = 202 Score = 152 bits (384), Expect = 4e-36, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + PL V G P A + + I++ ++ + ++ +GDSMI GI DG Sbjct: 73 ERGMKLPLAG-TVAAGKPIEAIE-IPDVIEVPPTMVGSGEH-FVLRVAGDSMIGDGIIDG 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V TA HG V+A +D E TVK+L R ++L P N + PI ++ D + Sbjct: 130 DYVVVRKQATAEHGQTVVALLDNEATVKRLHRRNDRIELHPANPSMQPIVVTDPDNFRIE 189 Query: 129 GVVIHVVKAMR 139 GVV+ V++ R Sbjct: 190 GVVVGVIRHYR 200 >UniRef50_B9MLH8 LexA repressor n=1 Tax=Anaerocellum thermophilum DSM 6725 RepID=B9MLH8_ANATD Length = 819 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 48/131 (36%), Positives = 70/131 (53%), Gaps = 3/131 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++T L+ + V G P +D ++ L +I P + +K GDSM++ I DG Sbjct: 691 EDVLTINLY-EKVAAGTPVETSDEAIGKVALPTSIISDPERYFAIKVKGDSMVEANIKDG 749 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D+ IV TA + DIVIA +DGE TVK+ + V LIP NS Y PI I L + Sbjct: 750 DIAIVQKCNTAENRDIVIAWLDGEITVKRFCKMGSTVLLIPENSKYEPINIKEG-ELRIV 808 Query: 129 GVVIHVVKAMR 139 G V+ V++ R Sbjct: 809 GKVVGVIRKKR 819 >UniRef50_Q2LXI2 DNA polymerase V subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXI2_SYNAS Length = 195 Score = 150 bits (379), Expect = 2e-35, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 4/134 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + P+ + V GFPSP + + + L++ L+ P A++ ++ SGDSM GI Sbjct: 64 AWKERPFSIPMVGE-VAAGFPSPEEEELRDILSLDEYLVARPDASFLLQVSGDSMTGAGI 122 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTL 125 GDL+IV+ +GD+VIA VDGE+T+K + V L N Y I L Sbjct: 123 LPGDLVIVEKGREPKNGDVVIAEVDGEWTMKTFRKEKGEVYLEAANPKYP--IIRPRQEL 180 Query: 126 DVFGVVIHVVKAMR 139 + GVV VV+ Sbjct: 181 KLAGVVTGVVRKYH 194 >UniRef50_B5EA68 LexA repressor n=8 Tax=Desulfuromonadales RepID=LEXA_GEOBB Length = 201 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 4/134 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + + P+ V+ G PA +E +++ + A +F++ GDSM+ I Sbjct: 69 CNQSQAASLPIVGV-VRAGLLHPAIQDIEGHFAIDRSQLASGGA-FFLRVKGDSMVHAHI 126 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISS-EDT 124 +GDL +V AS+ DIV+A VDGE T+K+ ++L P N Y PI I E Sbjct: 127 VEGDLALVRPQPHASNRDIVVAMVDGEATLKRFYREADRIRLQPENPNYEPIIIEKGEQE 186 Query: 125 LDVFGVVIHVVKAM 138 + + G V+ + + M Sbjct: 187 VSIVGKVVGIYRQM 200 >UniRef50_A4XL42 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_CALS8 Length = 202 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 6/131 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 R ++ PL V G P A + +E I L L+ A + ++ GDSMID GI D Sbjct: 77 HRNVIRLPLVG-KVTAGEPILAVENIEDTITLPYDLVGTEDA-FLLRVKGDSMIDAGIFD 134 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D++IV A +GDIV+A +D E TVK+ ++L P N A PI + + + Sbjct: 135 NDIIIVKRQNVAENGDIVVALIDDEATVKRFFKESDHIRLQPENKAMEPIIVK---DVKI 191 Query: 128 FGVVIHVVKAM 138 G VI +++ M Sbjct: 192 LGKVIGLIRRM 202 >UniRef50_A0LUZ1 LexA repressor n=6 Tax=Actinomycetales RepID=LEXA_ACIC1 Length = 275 Score = 149 bits (378), Expect = 2e-35, Method: Composition-based stats. Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 7/135 (5%) Query: 6 PADLR-EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 P D ++V PL + G P+ A +E + L + L+ + ++ GDSM+D Sbjct: 146 PIDSNPDVVAVPLVG-RIAAGGPALAEQLIEDVVPLPRQLVG-EGTLFLLQVKGDSMVDA 203 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED 123 I DGD ++V A +GDIV A +DGE TVK + R + L+P N Y PI D Sbjct: 204 AICDGDWVVVRQQPVAENGDIVAAMIDGEATVKTFKRRGAHIWLMPHNPQYEPI---PGD 260 Query: 124 TLDVFGVVIHVVKAM 138 + G V+ V++ + Sbjct: 261 EATILGRVVAVLRRL 275 >UniRef50_B3E774 LexA repressor n=2 Tax=Desulfuromonadales RepID=B3E774_GEOLS Length = 209 Score = 149 bits (376), Expect = 4e-35, Method: Composition-based stats. Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 6/140 (4%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 + ++PA+ V+ P+ V+ G +PA + ++ ++ + ++ +F++ SGDS Sbjct: 73 IALVRPAN--RSVSLPVVGV-VRAGHLAPAIEDIQGHFAVDPMAVKG-DDCFFLRVSGDS 128 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITI 119 MI+ GI DGDL +V TA + D V+A +DGE T+K R ++L P N PI I Sbjct: 129 MINAGILDGDLAMVRPQQTAGNKDTVVAMIDGEVTLKWFYRERDHIRLQPANPNMEPIII 188 Query: 120 SSED-TLDVFGVVIHVVKAM 138 ED L + G VI V + M Sbjct: 189 RPEDGELSIVGKVIGVYRRM 208 >UniRef50_C7N5D0 LexA repressor n=1 Tax=Slackia heliotrinireducens DSM 20476 RepID=C7N5D0_SLAHD Length = 230 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 5/137 (3%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F+ + +V P+ + V G P A +++ I L ++ S+ + +K GDSMI Sbjct: 98 FVGQGEFSNVVNLPVVGN-VAAGVPILAEQNIQETIPLPTEIVGDSSS-FLLKVRGDSMI 155 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISS 121 + GI+DGD ++V A++GDIV+A V+ TVK+ R ++L P NS PI + Sbjct: 156 EIGINDGDFVVVKEQPNANNGDIVVALVEDGATVKRFFKERDHIRLQPENSTMEPIIVR- 214 Query: 122 EDTLDVFGVVIHVVKAM 138 + + + G V+ V + + Sbjct: 215 -ENVSIAGKVVAVFRRL 230 >UniRef50_A5GAQ4 LexA repressor n=2 Tax=Bacteria RepID=LEXA_GEOUR Length = 201 Score = 148 bits (374), Expect = 6e-35, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 4/129 (3%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 + P+ V+ G PA + +E +++ L++ + +F++ GDSMI+ GI GDL Sbjct: 74 ATSIPIVGV-VRAGALQPAIEDIEGYFAVDRALVKG-ADCFFLRVKGDSMIEAGIRSGDL 131 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISS-EDTLDVFG 129 +V TA +GDIV+A ++ E T+K+ ++L P NSA PI + + +++ G Sbjct: 132 ALVRPQATADNGDIVVARINDEATLKRFFREKDRIRLQPENSAMEPIIVKAKAGEVNIIG 191 Query: 130 VVIHVVKAM 138 V + +++ Sbjct: 192 KVTGIFRSL 200 >UniRef50_B1I2R5 LexA repressor n=3 Tax=Bacteria RepID=B1I2R5_DESAP Length = 196 Score = 147 bits (373), Expect = 7e-35, Method: Composition-based stats. Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 6/128 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 V PL + G P PA +Y E + L L + ++ G+SM++ GI DGD Sbjct: 72 RAVAVPLLG-RIAAGQPHPAVEYREDVLLLPAELTGS-GECFALRVRGESMVEAGILDGD 129 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFG 129 L++V TA +GDIV A V GE TVK+ ++L P N PI D + G Sbjct: 130 LVVVRRQPTAENGDIVAALVAGEATVKRFYREDGRIRLQPENRTMRPIF---TDEAAILG 186 Query: 130 VVIHVVKA 137 V+ +++ Sbjct: 187 KVVALIRK 194 >UniRef50_B8IDM4 Peptidase S24 and S26 domain protein n=12 Tax=Alphaproteobacteria RepID=B8IDM4_METNO Length = 171 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 AD +V P + GFPS A D+ E ++L + L +P+AT+ + G M GI Sbjct: 11 ADWSGLVRIPFMRTTLCAGFPSSAEDFTEGALELPRWLAPNPAATFIWRVRGWCMKGAGI 70 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 D DL +VD ++ S G +V+A V+GE ++K+L L + L N + + Sbjct: 71 HDQDLAVVDRSLHPSPGAVVVAIVNGEMSLKRLVLDGNRLALTFDNPEMPAFGLEDLEEC 130 Query: 126 DVFGVVIHVVKAMR 139 ++GV++ V+ Sbjct: 131 QIWGVLLFSVRWHH 144 >UniRef50_B5YB12 LexA repressor n=2 Tax=Dictyoglomus RepID=B5YB12_DICT6 Length = 199 Score = 147 bits (373), Expect = 9e-35, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 6/139 (4%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 ++K E++ PL ++ G P + +Y+E+ I + + ++ P ++ +K GDSM Sbjct: 66 FYLKNLINEEVIYLPLIG-TIRAGIPVESPEYIEEYIPVPKNFVKIPEKSFLLKVRGDSM 124 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITIS 120 I DGDL+IV TA G+IV+A DGE TVK L + L P N YS I Sbjct: 125 EGAHILDGDLIIVQKQDTAQKGEIVVALKDGESTVKFLSENYGIPCLKPANPRYSEIYPP 184 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + G V+ V++ + Sbjct: 185 ----FKIIGKVVGVIRLFK 199 >UniRef50_B4YK22 TumD n=1 Tax=Tetrathiobacter kashmirensis RepID=B4YK22_9BURK Length = 142 Score = 146 bits (370), Expect = 2e-34, Method: Composition-based stats. Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 1/123 (0%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L GFPSPA D RID+ ++L+++P++T+++ G SM + GI DGD LIVD Sbjct: 19 LIVCKTPAGFPSPAQDLAVNRIDIGEILVKNPTSTFYLCVKGHSMKEAGIEDGDHLIVDR 78 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++TA H IVIA +DG+ TVK+L + ++L N Y I ++GVV HV+ Sbjct: 79 SLTAKHNSIVIAEIDGDVTVKRLHKKNGVIRLKAANLTYPDIVPVPGQEWMIWGVVTHVI 138 Query: 136 KAM 138 K M Sbjct: 139 KDM 141 >UniRef50_B5H2B7 LexA repressor n=3 Tax=Streptomyces RepID=B5H2B7_STRCL Length = 240 Score = 146 bits (369), Expect = 2e-34, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 7/138 (5%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + +P + PL ++ G P A +E L + L+ + +K +G+SMI Sbjct: 108 YEQPENQNAATEVPLVG-RIEAGAPVLAEQMIEDTYLLPRQLVG-EGELFALKVTGESMI 165 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITIS 120 + I DGD++ V A GDIV A +DGE TVK+ Q L+ N + P+ Sbjct: 166 EAAICDGDVVTVRRQQVAQPGDIVAAMLDGEATVKRFQRDAAGHAWLVAHNPRFQPL--- 222 Query: 121 SEDTLDVFGVVIHVVKAM 138 + D + G V+ V++A+ Sbjct: 223 AADHAVILGKVVAVIRAL 240 >UniRef50_C2BWE3 SOS mutagenesis protein UmuD n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BWE3_9ACTO Length = 146 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 56/125 (44%), Positives = 79/125 (63%), Gaps = 4/125 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL DL G+PSP+ DY ++ IDLN+ LI++ AT+ V+ +GDSMI+ GISDGD LIV Sbjct: 25 LPLAPDLAPAGWPSPSQDYFDRDIDLNEHLIRNRPATFLVRVAGDSMINAGISDGDELIV 84 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 D ++ AS G++VIA +DGE TVK+L +L P N Y + S L ++GVV Sbjct: 85 DRSLEASEGNVVIAIIDGEMTVKRLHFGTHGPELHPANPTYPILHPS---ELQIWGVVTR 141 Query: 134 VVKAM 138 + + Sbjct: 142 CLHRL 146 >UniRef50_Q3B450 Transcriptional regulator, XRE family n=4 Tax=Chlorobium/Pelodictyon group RepID=Q3B450_PELLD Length = 245 Score = 146 bits (369), Expect = 3e-34, Method: Composition-based stats. Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 2/134 (1%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + +V PL+S V G P+ AAD VE +D + + Y + SGDSM+D GI Sbjct: 112 EDEAVVQVPLYSSAVPAGMPAAAADEVECSVDFPRSWTKGKKNIYALTVSGDSMMDIGIM 171 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTL 125 GD L+V++ TA G +VIA+++ E TVK L + V L P N Y PI + + Sbjct: 172 PGDTLLVEARETARDGQVVIASLNSEVTVKTLCISAGGAVALAPENRKYHPIPVPPDSDF 231 Query: 126 DVFGVVIHVVKAMR 139 + GVV+ V+ R Sbjct: 232 RIMGVVLAAVRQYR 245 >UniRef50_C6M792 Component of DNA polymerase V n=3 Tax=Neisseria RepID=C6M792_NEISI Length = 204 Score = 145 bits (368), Expect = 3e-34, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 73/131 (55%), Gaps = 4/131 (3%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + P + + GFPSPA Y+ +D N+ LI PSAT+ ++ G SM+D GIS D++ Sbjct: 71 LKVPYALEKIPAGFPSPAEPYIADYLDFNEYLIATPSATFAARSGGYSMLDAGISKDDIM 130 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNS--AYSPITISSEDTLDVF 128 I+D + T HGDIV+A + EFT+K+L P +L N+ Y DT + Sbjct: 131 IIDRSKTPKHGDIVMADLGNEFTIKRLYKVPGRKPELHSENASGEYPDFVPDESDTWTII 190 Query: 129 GVVIHVVKAMR 139 GVV V+K +R Sbjct: 191 GVVTFVIKDVR 201 >UniRef50_B8I2Q1 LexA repressor n=357 Tax=Bacteria RepID=LEXA_CLOCE Length = 215 Score = 145 bits (367), Expect = 4e-34, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 5/130 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + + L +Q+ A + ++ G+SMID GI D Sbjct: 90 REMVDVPVVG-RVTAGQPILAVENITDTFPLPVDFVQNSDA-FMLRIQGESMIDAGILDK 147 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V +A++GDIV+A + E T K ++L P NS+ PI + D L + Sbjct: 148 DFVLVRQQSSANNGDIVVALIGDEATCKTFYREKDHIRLQPQNSSMEPIVVK--DELSIL 205 Query: 129 GVVIHVVKAM 138 G VI V + M Sbjct: 206 GKVIGVFRRM 215 >UniRef50_D0WEK1 LexA repressor n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WEK1_9ACTN Length = 232 Score = 145 bits (366), Expect = 6e-34, Method: Composition-based stats. Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 5/131 (3%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 IVT P+ + V G P A + + I L ++ +++ ++ G+SMI+ GI+D Sbjct: 106 FSNIVTLPVVGN-VAAGQPILAEQNITETIPLPTEIVGD-GSSFLLQVRGESMIEIGIND 163 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V TA +GD+V+A +D TVK R ++L P NSA PI + D + + Sbjct: 164 GDFVVVQEQPTARNGDVVVAIIDDGATVKTYYRERDHIRLQPENSAMEPIIVR--DDVSI 221 Query: 128 FGVVIHVVKAM 138 G V+ + + M Sbjct: 222 AGKVVALFRRM 232 >UniRef50_A7HC61 LexA repressor n=8 Tax=Myxococcales RepID=LEXA_ANADF Length = 231 Score = 144 bits (365), Expect = 6e-34, Method: Composition-based stats. Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 6/138 (4%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 +KPA +V P+ V G P A + VE + ++ L+ Y ++ GDSMI Sbjct: 96 LKPA--GRLVEIPILG-RVAAGQPILAQERVEDTVQVDSFLLGTNKKVYGLRVQGDSMIG 152 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI GD + V + A GDIV+A +D E TVK++ V+ P N +PI + Sbjct: 153 DGILPGDYIFVKKQLHAEDGDIVVAMIDEEATVKRVYFEGDRVRFQPSNPRMAPIYVRGS 212 Query: 123 D--TLDVFGVVIHVVKAM 138 D T + GVV+ V + + Sbjct: 213 DFRTTMILGVVVGVYRKL 230 >UniRef50_C1I5N8 LexA repressor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=C1I5N8_9CLOT Length = 475 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 76/131 (58%), Gaps = 3/131 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E+ P+F++ + G P D +E + + ++ T+ ++ GDSM++ I Sbjct: 344 NENELEDIPMFNN-IAAGTPIEMNDNIEGSFCIPKYWLERGKDTFILRVKGDSMVEKEIC 402 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLD 126 DGDL+++ TA+H +IV A++DGE T+K L L + +L+P NS Y+PI++ ++ Sbjct: 403 DGDLVVIKKQGTANHNEIVAASLDGEATLKTLNLNGNLPKLMPANSLYAPISL-ENKEVN 461 Query: 127 VFGVVIHVVKA 137 + GV I ++K Sbjct: 462 ILGVAIGIIKQ 472 >UniRef50_C6Q0C8 LexA repressor n=1 Tax=Clostridium carboxidivorans P7 RepID=C6Q0C8_9CLOT Length = 487 Score = 144 bits (364), Expect = 8e-34, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 E+ P++SD + G P +E + ++ + +K GDSMI I + Sbjct: 359 EEELKKLPVYSD-IAAGEPILMNPEIEDVFYVPTYWLKGMKDCFILKVRGDSMIGADIDN 417 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDV 127 GD +I+ TA + DIV +DG T+K+ + + L+P N Y PI I+ ++ + Sbjct: 418 GDYVIIKKQYTAQNKDIVAVNLDGNATLKRFVNKKEGIYLMPENKKYEPIRIN-DEGARI 476 Query: 128 FGVVIHVVKA 137 GV + ++K Sbjct: 477 IGVAVGIIKE 486 >UniRef50_C6HXW1 LexA repressor n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HXW1_9BACT Length = 209 Score = 144 bits (364), Expect = 9e-34, Method: Composition-based stats. Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 3/128 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +V P+ V G P + + + + ++ ++ +F+K G+SM I DG Sbjct: 77 SSLVEVPILGQ-VAAGLPILSEENLSGHLSVDPAWVRKGP-VFFLKVHGESMKGAAILDG 134 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 D ++V TA +G IV+A +DGE TVK+L+ R + L+P N + I + E + + Sbjct: 135 DYVLVRQQETADNGQIVVATIDGETTVKRLRQRGDQLSLLPENPDFPEIPVRKEGSFRII 194 Query: 129 GVVIHVVK 136 G+V+ V + Sbjct: 195 GLVVGVFR 202 >UniRef50_C5B4V8 Component of DNA polymerase V, subunit D n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B4V8_METEA Length = 144 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 1/128 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 V PL + V+ GFPSPA D++EQ IDL +LL+ + +T+ V+ SGDSM+ + DGD+ Sbjct: 12 VPLPLLAGAVRAGFPSPAEDFIEQEIDLQRLLVPNRPSTFLVRVSGDSMVLARLFDGDIA 71 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD ++T S GDIV+ +DGE + K + VQL N + I ++ ++++G+V Sbjct: 72 VVDRSLTPSDGDIVVVDIDGERSFKIWSRRAGRVQLSFANPRFPEFEIQADAVVEIWGIV 131 Query: 132 IHVVKAMR 139 + R Sbjct: 132 SGSINPRR 139 >UniRef50_D1VBC2 LexA repressor n=1 Tax=Frankia sp. EuI1c RepID=D1VBC2_9ACTO Length = 278 Score = 144 bits (363), Expect = 1e-33, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 7/127 (5%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + G P A VE + L + ++ + ++ G+SMI+ I DGDL+ Sbjct: 157 YLPLVG-RIAAGGPILAEQAVEDVLPLPREIVG-EGTLFLLRVVGESMINAAICDGDLVA 214 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 V A +G+IV A +DGE TVK+ + V L P N A+ I + D + G V Sbjct: 215 VRQQPVAENGEIVAAMIDGEATVKRFRRHDDGHVWLQPENPAFHDI---AGDDATILGRV 271 Query: 132 IHVVKAM 138 + V++ + Sbjct: 272 VAVMRRV 278 >UniRef50_B0TFZ8 LexA repressor n=1 Tax=Heliobacterium modesticaldum Ice1 RepID=B0TFZ8_HELMI Length = 260 Score = 143 bits (362), Expect = 2e-33, Method: Composition-based stats. Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 6/130 (4%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + PL + V G P AA+YVE + + + ++ + ++ GDSMID GI GD Sbjct: 136 PFLQVPLLGN-VAAGSPILAAEYVEDYLPIAKSMLG-EGEFFGLRVKGDSMIDAGILHGD 193 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 +IV AS+G IV+A +D + TVK+ V+L P NSA PI + L + G Sbjct: 194 TVIVRRQAHASNGQIVVALIDDDATVKRFFKEADHVRLQPENSALEPIRVR---DLSILG 250 Query: 130 VVIHVVKAMR 139 V+ V++ + Sbjct: 251 KVVMVLRNVH 260 >UniRef50_C2KVZ7 LexA repressor n=1 Tax=Oribacterium sinus F0268 RepID=C2KVZ7_9FIRM Length = 235 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++E+V+ P+ V G P A + V L ++ + T+ +K GDSMI+ GI D Sbjct: 109 MKEMVSVPVIG-TVAAGTPIFAEENVSDHFPLPTEILPN-QETFILKVKGDSMINVGIFD 166 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 GD L+V T S G++V+A V+ TVK+ ++L P N I ++ + Sbjct: 167 GDYLMVAKQNTCSDGEVVVALVEDSATVKRFYKEKGYIRLQPENDTMEDIIVN---DCQI 223 Query: 128 FGVVIHVVK 136 G I +++ Sbjct: 224 LGKAIGLIR 232 >UniRef50_D1BMK8 LexA repressor n=3 Tax=Veillonella RepID=D1BMK8_VEIPT Length = 223 Score = 143 bits (361), Expect = 2e-33, Method: Composition-based stats. Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL VQ G P A + +E + L L S + ++ G+SM++ G+ +GD+LIV Sbjct: 103 VPLIG-TVQAGMPITAVENLESTLTLPVQLTGD-SDCFLLRVQGESMMNIGMYEGDMLIV 160 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 TA++GD+V+A +D E TVK+ ++L P N + PI + D + G+VI Sbjct: 161 RHQNTANNGDVVVARIDDEATVKRFYKENGHIRLQPENDDFDPIIV---DDCHIEGLVIG 217 Query: 134 VVKA 137 +V+ Sbjct: 218 LVRD 221 >UniRef50_A6LWK1 Putative prophage repressor n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LWK1_CLOB8 Length = 512 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 3/131 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + ++V P+F++ + G P +Y+E L + I+ + +K GDSMI+ I Sbjct: 383 KVDDVVNIPVFNE-IAAGNPILINEYIEDSYSLPKDWIRTSKDVFMLKVKGDSMINKNIY 441 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLD 126 DGD +++ DIV ++GE T+K + + + LIP N Y PI I + + Sbjct: 442 DGDYVVISKQNMPRIKDIVAVDIEGEATLKTYKVIDGKIALIPENDKYQPIII-EDQQFN 500 Query: 127 VFGVVIHVVKA 137 V GV I ++K Sbjct: 501 VLGVAIGLIKN 511 >UniRef50_C6XEM9 Peptidase S24 and S26 domain protein n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XEM9_METSD Length = 161 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 52/126 (41%), Positives = 69/126 (54%), Gaps = 3/126 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ P FS V GF +PA D++E+ ID N LI P+AT ++ GDSMI+ I + D+L Sbjct: 39 LSLPYFSSTVHAGFENPANDHIEEEIDPNGYLIDDPNATILIRVKGDSMIEAEIFEDDIL 98 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 IV+ A GDIV+A +DG FTVK L LIP N Y I L + GVV Sbjct: 99 IVNRKRRARAGDIVVAELDGGFTVKYL---GKHCLIPANKKYPVIKFQDMQELRLIGVVT 155 Query: 133 HVVKAM 138 +K Sbjct: 156 GKMKRF 161 >UniRef50_D0YVD4 LexA repressor n=2 Tax=Mobiluncus mulieris RepID=D0YVD4_9ACTO Length = 278 Score = 142 bits (360), Expect = 3e-33, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 6/133 (4%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 AD + PL + G P A + VE L + + ++ +G+SM D I Sbjct: 151 ADTADSNAIPLVG-RIAAGTPITAEELVEDTFMLPRRFTG-AGELFMLEVNGESMRDAAI 208 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTL 125 +GD ++V + A +GDIV A ++GE TVK+ V L+P N ++ PI D Sbjct: 209 MNGDWVVVRAQNEARNGDIVAAMLEGEATVKEFSRDKGHVWLLPHNPSFEPI---PGDGA 265 Query: 126 DVFGVVIHVVKAM 138 + G V+ V++A+ Sbjct: 266 TILGKVVTVIRAL 278 >UniRef50_Q129C4 LexA repressor n=93 Tax=Proteobacteria RepID=LEXA_POLSJ Length = 234 Score = 142 bits (359), Expect = 3e-33, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 F P + PL V G P A +++EQ L Q Y +K G SM Sbjct: 97 FSLPLQSLAQLALPLVG-RVAAGSPILAQEHIEQTYYFESSLFQRQPD-YLLKVRGMSMR 154 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISS 121 D GI DGDLL V A A +G IV+A + E TVK+ + ++L+P N + I + Sbjct: 155 DAGIIDGDLLAVKQAKEARNGQIVVARIGDEVTVKRFRRTKHLIELLPENPDFKTIVVEP 214 Query: 122 EDTLDVFGVVIHVVKA 137 + ++ G+ + +++ Sbjct: 215 GEPFELEGLAVGLIRN 230 >UniRef50_Q6MHM9 LexA repressor n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MHM9_BDEBA Length = 240 Score = 142 bits (358), Expect = 4e-33, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 12/138 (8%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 EI++ PL V G P A + ++ +D+ ++++PS ++ +K GDSMI+ GI D Sbjct: 106 DEILSLPLLG-KVAAGQPIEAIKH-DEFVDVPPSMVRNPSKSFALKVQGDSMIEDGIFDE 163 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT---------VQLIPMNSAYSPITIS 120 D++++ +A++GDI++A VD E TVK+ LRP V+L P NS + + Sbjct: 164 DIILIQKQNSANNGDIIVATVDNEATVKRFYLRPRPETGDADKMVELRPSNSTMKSMWYT 223 Query: 121 SEDTLDVFGVVIHVVKAM 138 D +++ G+V+ +++ Sbjct: 224 P-DEVEIRGIVVGLIRKF 240 >UniRef50_B5IHW7 Peptidase family protein n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IHW7_9CHRO Length = 182 Score = 142 bits (358), Expect = 5e-33, Method: Composition-based stats. Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 3/140 (2%) Query: 1 MLFIKPADLREI-VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 + ++ P D PL ++ V GFPSPA DYVE IDLN LI P++T+ ++ GD Sbjct: 13 LTWLGPIDTAAAGTGLPLATETVAAGFPSPADDYVEASIDLNAALIPRPTSTFLMRVEGD 72 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPIT 118 +M GI GDLL++D ++ A G V+ DG F +++L+ RP QL+ + A +P+ Sbjct: 73 AMRAAGIHHGDLLVIDRSVNARPGCTVVVVHDGRFLLRQLRGQRPPWQLVASDPAIAPMV 132 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + +D L ++GVVIH V + Sbjct: 133 LQDDDAL-IWGVVIHAVHHL 151 >UniRef50_Q2S5T1 UmuD protein n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S5T1_SALRD Length = 140 Score = 141 bits (357), Expect = 5e-33, Method: Composition-based stats. Identities = 53/126 (42%), Positives = 77/126 (61%), Gaps = 1/126 (0%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M +PA + P F V+ GFPSPA+DYVE +DL + LI+H +ATY+++ SG S Sbjct: 1 MTAARPARHTPRLRQPFFLTRVEAGFPSPASDYVETELDLAEHLIEHEAATYYLRVSGTS 60 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITI 119 M GI DGD+L+VD A+ + GD+V+AA+D E TVK+L+ L+P + + PI + Sbjct: 61 MTRAGIHDGDILVVDRAVEPADGDVVVAALDAELTVKRLRTRDGRAFLVPESQHHDPIPV 120 Query: 120 SSEDTL 125 L Sbjct: 121 RDGQEL 126 >UniRef50_C0W9V2 LexA repressor n=1 Tax=Acidaminococcus sp. D21 RepID=C0W9V2_9FIRM Length = 214 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 5/129 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E+V PL V G P A +++E + L+ + + GDSM D GI D Sbjct: 87 KEVVGVPLVGA-VHAGDPILADEHIEDMYPIPTELLGTKDDVFMMVVEGDSMKDAGILDR 145 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A +GDIV+A ++G E T+K+ ++L+P NSAYSPI D + + Sbjct: 146 DYVFVRRQDYAQNGDIVVALLNGEETTIKRYFRELKQIRLVPENSAYSPIV--GTDNIKI 203 Query: 128 FGVVIHVVK 136 GVV+ V + Sbjct: 204 TGVVVGVFR 212 >UniRef50_B9K9N0 LexA repressor n=3 Tax=Thermotogaceae RepID=LEXA_THENN Length = 207 Score = 141 bits (357), Expect = 6e-33, Method: Composition-based stats. Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 3/126 (2%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + ++ G A +Y+E I++ + + ++ G+SMI+ I DGDL++ Sbjct: 74 RVPLIGE-IRAGEKKEAIEYLEDYIEVPGSFLSSGYEHFLLRVKGESMIEEHICDGDLVL 132 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVI 132 + A +GDIV A V+GE T+KK R V+L P N SP+ + D + + G V+ Sbjct: 133 IRRQDWAQNGDIVAAMVEGEVTLKKFFQRGEMVELRPANKEMSPMFFRA-DRVKILGKVV 191 Query: 133 HVVKAM 138 V + Sbjct: 192 GVFRKY 197 >UniRef50_B0SYZ8 LexA repressor n=6 Tax=Alphaproteobacteria RepID=LEXA_CAUSK Length = 235 Score = 141 bits (356), Expect = 7e-33, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 4/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 P+ + G P A + +R+ + + ++ Y ++ GDSMI+ GI DG Sbjct: 108 DNSRELPILG-RIAAGTPIDAIQHERERLPVPESMLGAGEH-YVLEVQGDSMIEAGILDG 165 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D +I+ TA+ G+IV+A V E T+K+L+ + + L N Y + ++V Sbjct: 166 DYVIIKKGDTANSGEIVVALVGEEATLKRLRKKGGSIALEAANPKYETRIFGPDQ-VEVQ 224 Query: 129 GVVIHVVKAMR 139 G ++ +++ Sbjct: 225 GKLVGLIRRYH 235 >UniRef50_A0L9E2 LexA repressor n=1 Tax=Magnetococcus sp. MC-1 RepID=LEXA_MAGSM Length = 231 Score = 141 bits (356), Expect = 8e-33, Method: Composition-based stats. Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 4/132 (3%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 K D+ +V P+ + V G P A + + ++ + P + +K GDSMID Sbjct: 93 EKKPDVARLVPVPIIGE-VAAGIPILAVENHIGELLMDSRTARGP--CFALKVKGDSMID 149 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSE 122 I +GD ++V A +GDIV+A +DGE TVK+L + T++L P N +Y PI + Sbjct: 150 AEIFEGDYVVVRHQALAENGDIVVAILDGEATVKRLYISEETIELRPENRSYQPIVVPPG 209 Query: 123 DTLDVFGVVIHV 134 + + G V+ V Sbjct: 210 GDIRILGKVLAV 221 >UniRef50_A3ERE0 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERE0_9BACT Length = 205 Score = 140 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 3/128 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 V P+ V G + + + ++ + + +F++ GDSM D I DG Sbjct: 76 PNAVPVPVLG-RVAAGSLRESPEDHTKTWFVDPDWLPEGPS-FFLRVRGDSMKDAAILDG 133 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 D ++V S A GDIV+A +DGE TVK+L + + L P NSAY I I ++ + Sbjct: 134 DYVLVSSRPDAKPGDIVVAMIDGESTVKRLSRKGDRLVLSPENSAYPDIPIPTDTDFRIT 193 Query: 129 GVVIHVVK 136 GVV+ V++ Sbjct: 194 GVVVGVIR 201 >UniRef50_A6G107 LexA repressor n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G107_9DELT Length = 207 Score = 140 bits (355), Expect = 9e-33, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 7/142 (4%) Query: 4 IKPADLRE-IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSA--TYFVKASGDS 60 ++P + V+ P+ V G P A + + R+ +++ + + + + GDS Sbjct: 67 LRPVGHDDQKVSIPILGQ-VAAGQPILAQENISDRVTIDRFFVGKAPSKEVFGLVIRGDS 125 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITI 119 MI+ GI DGD + V TA +G+I + ++GE T K+ V+L P N +PI + Sbjct: 126 MIEDGIYDGDYIFVRKQSTAENGEIAVVMIEGEATCKRVFHEGDRVRLQPANETMAPIYV 185 Query: 120 SSED--TLDVFGVVIHVVKAMR 139 + +DV G V+ V + + Sbjct: 186 HRSEFRAIDVIGKVVGVYRKLH 207 >UniRef50_Q19NE7 UV protection and repair protein n=9 Tax=Enterobacteriaceae RepID=Q19NE7_ECOK1 Length = 144 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 54/123 (43%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 P FSDL+ CG SP A + + ++L++ ++++ +T+FV+A+G SMI+ GI+DG +L+VD Sbjct: 17 PFFSDLLSCGVMSPCAGHEDNELNLHEYVVRNRPSTFFVRAAGLSMINAGINDGAILVVD 76 Query: 76 SAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 ++TA HG IV+A VDGEFTVK L P + L+P N AY PI ++ ++L+++GVV + Sbjct: 77 RSLTARHGSIVVALVDGEFTVKILHTYPELLLMPSNPAYKPIRVNP-ESLEIWGVVTFAL 135 Query: 136 KAM 138 Sbjct: 136 NQF 138 >UniRef50_C4IFP8 Serine peptidase n=2 Tax=Clostridium butyricum RepID=C4IFP8_CLOBU Length = 563 Score = 140 bits (355), Expect = 1e-32, Method: Composition-based stats. Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E+VT P+F++ + G P D VE ++ + I+ + +K GDSM+ I+ Sbjct: 432 KVEEVVTIPVFNE-IAAGSPILMNDEVEYSCNIPKSWIRGTKDLFILKIKGDSMVKKNIN 490 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLD 126 DGD ++++ D+V ++GE T+K + + V L P N Y PI ++ E Sbjct: 491 DGDHVLINKNKYPCANDVVAVEIEGEATLKTFKTKGKYVILKPENDKYDPIILNGEQEYS 550 Query: 127 VFGVVIHVVKAM 138 + GV + ++K Sbjct: 551 ILGVAVGILKNF 562 >UniRef50_Q97I60 P-loop ATPase domain fused to LexA-like protein n=1 Tax=Clostridium acetobutylicum RepID=Q97I60_CLOAB Length = 480 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 70/130 (53%), Gaps = 2/130 (1%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 EI P+F++ + G P +E + L + ++ + +K GDSMI+ I+D Sbjct: 351 ENEIEKIPIFNE-IAAGEPILINSQIEDKFYLPRYWVKDAKNCFILKIKGDSMINADIND 409 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 GD +++ A + DIV +DG T+K+L++ + +P N YSPI ++ ++ + + Sbjct: 410 GDCVVIKKTGAAENRDIVAVNIDGSATLKRLKMDKDGIAFMPENELYSPIKVTEDEQVML 469 Query: 128 FGVVIHVVKA 137 G+ + V+K+ Sbjct: 470 IGIAVGVLKS 479 >UniRef50_Q0SJ79 LexA repressor n=8 Tax=Actinomycetales RepID=Q0SJ79_RHOSR Length = 247 Score = 140 bits (354), Expect = 1e-32, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 VT P+ D + G P A ++ ++ + L + L+ + ++ G+SMID I DG Sbjct: 123 ENNVTVPVVGD-IAAGAPILAEEHADEMLTLPRELVGS-GTVFGLRVRGESMIDAAICDG 180 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVF 128 D+++V A G+IV A +DGE TVK L + V L P N AY+ I D V Sbjct: 181 DVVVVRRQDEAHSGEIVAAMIDGEATVKVLRRRDGHVFLEPRNPAYAVI---DGDDAVVL 237 Query: 129 GVVIHVVKAM 138 G V+ V++ + Sbjct: 238 GKVVSVMRRI 247 >UniRef50_Q4JV87 LexA repressor n=77 Tax=Actinobacteria (class) RepID=LEXA_CORJK Length = 267 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + E P+ + G P A VE L Q L+ + + ++ G+SM D GI + Sbjct: 142 MPEATYVPVVGQ-IAAGAPILAEQNVEAHFPLPQELVGN-GELFLLQVVGESMHDAGIFN 199 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V S A GD V A +DGE TVK+ Q + LIP N + PI + + Sbjct: 200 GDWVVVRSQSVAEFGDFVAAMIDGEATVKEFQKDADGLWLIPHNPLFEPI---PAEEATI 256 Query: 128 FGVVIHVVKAM 138 G V V++ + Sbjct: 257 LGKVAAVLRKI 267 >UniRef50_C8WAR1 LexA repressor n=3 Tax=Atopobium RepID=C8WAR1_ATOPD Length = 217 Score = 140 bits (353), Expect = 1e-32, Method: Composition-based stats. Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL V G P A VE+ + L ++ S+ + ++ G+SMI+ GI DG Sbjct: 92 NNVISLPLVG-RVAAGTPILAEQNVEESLSLPTSIVGDSSS-FILRVRGESMINAGIFDG 149 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 D ++V A G+IV+A +D TVK ++L P N PI + + + Sbjct: 150 DYIVVKEQQDAHDGEIVVALIDDSATVKTFYRENDRIRLQPENDFMEPIYVKNP---VIL 206 Query: 129 GVVIHVVKAM 138 G V +++++ Sbjct: 207 GRVTALIRSI 216 >UniRef50_C0VG55 UmuD family protein n=2 Tax=Acinetobacter RepID=C0VG55_9GAMM Length = 161 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 1/128 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 ++ + + V GFPSPA DY++++ID+N+ LI + AT+ VK SM + GI D L Sbjct: 33 MSISVAIEKVSAGFPSPAQDYIDKKIDMNEHLISNECATFIVKVGSLSMKNAGIDIDDEL 92 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 IVD ++ A H DIV+A +D +FTVK+L++ L N Y I + L ++GVV Sbjct: 93 IVDRSLDAKHDDIVVALIDNDFTVKRLKIEQHRTWLKAENPDYDDIHLKDGQQLIIWGVV 152 Query: 132 IHVVKAMR 139 ++K R Sbjct: 153 TFILKKAR 160 >UniRef50_A0K1P5 UmuD protein. Serine peptidase. MEROPS family S24 n=6 Tax=Arthrobacter RepID=A0K1P5_ARTS2 Length = 143 Score = 140 bits (353), Expect = 2e-32, Method: Composition-based stats. Identities = 51/118 (43%), Positives = 71/118 (60%), Gaps = 1/118 (0%) Query: 20 DLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 V G+PSPA DY + RIDLN+ LI+ ++TY V+ SGDSM GISDGD LIV+ A+ Sbjct: 24 VPVAAGYPSPAQDYFDGRIDLNEHLIKDITSTYIVRVSGDSMEGAGISDGDELIVNRALD 83 Query: 80 ASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 G +VIA +DGE T+K+L++ V L N Y I + + L ++GV + Sbjct: 84 PKDGSVVIAVLDGELTIKRLRVTASGVVLQADNPRYPDIRVPALSDLVIWGVATRCLH 141 >UniRef50_B8FIX5 LexA repressor n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=LEXA_DESAA Length = 203 Score = 139 bits (352), Expect = 2e-32, Method: Composition-based stats. Identities = 38/128 (29%), Positives = 62/128 (48%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + G P A + V +D+++ A + V+ GDSMI+ I DGD ++ Sbjct: 78 KIPLVG-RIAAGAPILAVENVMDTLDVDRAFFGSSDA-FSVRVEGDSMIEAHIEDGDYVV 135 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED--TLDVFGV 130 + T +GDIV A V+ E T+K ++L P N Y P + ED + V GV Sbjct: 136 IKPTATPRNGDIVAALVNDEVTLKYFHRDGSRIELRPANVRYKPFCYTEEDFIDVRVLGV 195 Query: 131 VIHVVKAM 138 + +++ + Sbjct: 196 MAGLIRKV 203 >UniRef50_D2LQX0 LexA repressor n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2LQX0_BACS4 Length = 808 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 3/131 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + PL + V G P+ A + E I L I P+ T+ + +GDSMI GI Sbjct: 680 VEYETKTRVPLIGN-VAAGVPTTAEEQYESVIVLPNDWIASPNDTFALTVTGDSMIGAGI 738 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTL 125 GD +IV+ AS+GDIVIA ++ E T+KK + +V LI NS+Y PI + ED + Sbjct: 739 DKGDQVIVNRQNVASNGDIVIAIIEEEATMKKFMLMGDSVLLISENSSYEPIQMKRED-V 797 Query: 126 DVFGVVIHVVK 136 + G VI V+K Sbjct: 798 LINGKVIGVLK 808 >UniRef50_A0LGS1 LexA repressor n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=LEXA_SYNFM Length = 206 Score = 139 bits (351), Expect = 3e-32, Method: Composition-based stats. Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 5/129 (3%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 V+ P V G P A + + + +++ + + + + + ++ GDSMI+ GI +GD+ Sbjct: 75 AVSIPFLGV-VAAGTPIEAVE-IPESVEVPESFLANGNN-FALRVKGDSMIEEGIREGDI 131 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGV 130 LIV A +G V+A V GE TVKK R ++L P NS PI + D ++V G Sbjct: 132 LIVARQSRAENGQTVVALVQGEATVKKFYQRGEEIELRPANSRMQPIHARA-DAVEVVGT 190 Query: 131 VIHVVKAMR 139 V+ +++ R Sbjct: 191 VVGLLRNYR 199 >UniRef50_D2RJY0 Transcriptional repressor, LexA family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJY0_ACIFE Length = 215 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + +V PL V G P A + +E + LI + + GDSM + GI D Sbjct: 88 KSMVPVPLVGA-VHAGDPMLAVENIEDTYPIPLDLIGCSEDVFMMVVEGDSMKNAGILDH 146 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D + V A++GDIV+A +G E T+K+ ++L P N AY PI D +++ Sbjct: 147 DYVFVRKQNYATNGDIVVALFNGEETTIKRYFRELKQIRLQPENDAYPPIV--GTDNIEI 204 Query: 128 FGVVIHVVKAM 138 G VI V + + Sbjct: 205 KGKVIAVFRTL 215 >UniRef50_A8ZS26 LexA repressor n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZS26_DESOH Length = 210 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 5/133 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + P+ + G P A E + L++ + ++ GDSM D I Sbjct: 76 AGMHRWREIPVIGA-ITAGLPMYAQQEWEGTLVLDRSCFPG-DNLFALRVKGDSMKDAAI 133 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDT 124 DGDL+I + A +G+IV+A V+G E TVK+ R ++L P N AY+P+ + D Sbjct: 134 LDGDLVICEPRQFAENGEIVVALVNGEEATVKRFFKRQDHIELKPENPAYAPLKLMFGD- 192 Query: 125 LDVFGVVIHVVKA 137 + + G VI + + Sbjct: 193 VLIQGKVIGLHRD 205 >UniRef50_A8L6K4 LexA repressor n=59 Tax=Bacteria RepID=LEXA_FRASN Length = 250 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 6/127 (4%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 PL + G P A +E L + ++ + +K G SMI+ I DGD + Sbjct: 129 TYVPLVG-RIAAGGPILAEQAIEDVYPLPKEIVG-EGTLFLLKVVGQSMINAAICDGDFV 186 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 +V A +G+IV A +DGE TVK+ Q V L P N A+S I + + G + Sbjct: 187 VVRQQPVADNGEIVAAMIDGEATVKRFRQRDGRVWLAPENPAFSDI---PAEDATILGRI 243 Query: 132 IHVVKAM 138 + V++ + Sbjct: 244 VAVMRRV 250 >UniRef50_Q314F2 LexA repressor n=5 Tax=Deltaproteobacteria RepID=LEXA_DESDG Length = 207 Score = 139 bits (350), Expect = 4e-32, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+ V G P A + + + L + + + + GDSMID GI+DGDL Sbjct: 83 LVAVPIVG-TVAAGHPIFAHENITGEV-LVEASVVGSGKCFALYTQGDSMIDAGINDGDL 140 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 +IV A GDIVIA +D E TVK+L++ ++L+P N PI + ED L + G Sbjct: 141 IIVRRQPIAEDGDIVIALLDDEATVKRLKIDNELIELVPENPRLKPIRVKPEDELRILGK 200 Query: 131 VIH 133 V+ Sbjct: 201 VVG 203 >UniRef50_D1NSV5 LexA repressor n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSV5_9BIFI Length = 263 Score = 138 bits (349), Expect = 5e-32, Method: Composition-based stats. Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 6/131 (4%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 L + PL + G P A +VE + L L + ++ GDSM+D I D Sbjct: 138 LENSMDVPLVGS-IAAGTPITAEQHVEDVMRLPVRLTGTGK-LFMLEVHGDSMVDAAICD 195 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDV 127 GD ++V TA +GDIV A + E TVK + + L+P N +YSPI + Sbjct: 196 GDFVVVREQHTADNGDIVAALLGDEATVKTFRNEDGHIWLMPHNPSYSPI---DGTHAQI 252 Query: 128 FGVVIHVVKAM 138 G V+ V++ + Sbjct: 253 MGKVVTVLRRL 263 >UniRef50_C9LED1 UmuD protein n=2 Tax=Bacteroidales RepID=C9LED1_9BACT Length = 216 Score = 138 bits (348), Expect = 7e-32, Method: Composition-based stats. Identities = 53/140 (37%), Positives = 76/140 (54%), Gaps = 4/140 (2%) Query: 4 IKPADLREIVTFPLFSD-LVQCGFPSPAA-DYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 I PA +T P F + V GFP D Q +D+ ++L +P A+Y +K GDSM Sbjct: 76 IYPATSVRSMTLPKFDNARVVAGFPLALDTDEQAQSVDILRMLCPNPEASYLIKVRGDSM 135 Query: 62 IDGGISDGDLLIVDSAI-TASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITI 119 ID GISDGD++IVD + T S ++ + +GE+T+K +Q L+P N Y I I Sbjct: 136 IDAGISDGDIIIVDKSNRTPSEHEVAVCEYNGEYTIKHIVQQAGKTWLVPANPKYPRIEI 195 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 ED V+GVV + + R Sbjct: 196 FEEDDFSVWGVVTYTIHKPR 215 >UniRef50_A1A2G3 LexA repressor n=7 Tax=Actinobacteridae RepID=LEXA_BIFAA Length = 257 Score = 137 bits (347), Expect = 7e-32, Method: Composition-based stats. Identities = 43/125 (34%), Positives = 63/125 (50%), Gaps = 6/125 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL + G P A +V+ + L + L + ++ GDSMID I DGD ++V Sbjct: 138 VPLVG-RIAAGVPITAEQHVDDVMRLPERLTGT-GNLFMLEVHGDSMIDAAICDGDFVVV 195 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 +A +GDIV A +D E TVK + V LIP N AYSPI ++ G V+ Sbjct: 196 REQNSAENGDIVAALLDDEATVKTFRKDHGHVWLIPHNPAYSPI---DGTHAEIMGKVVT 252 Query: 134 VVKAM 138 V++ + Sbjct: 253 VLRKI 257 >UniRef50_A4J5P4 LexA repressor n=15 Tax=Firmicutes RepID=LEXA_DESRM Length = 214 Score = 137 bits (347), Expect = 8e-32, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 E+++ PL + V G P A + ++++ L + + + + GDSMI+ GI G Sbjct: 90 EELISIPLLGE-VAAGVPLLAVENYDEKVTLPRSFTGY-GEFFMLSVRGDSMIEAGILPG 147 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVF 128 DL++V + S+GDI +A ++ E TVK+ ++L P NS SPI + + + Sbjct: 148 DLVLVRRQESVSNGDIAVALLEDEATVKRFYKEKNRIRLQPENSLLSPIYV---QEVKIL 204 Query: 129 GVVIHVVKAM 138 G V+ +++ + Sbjct: 205 GKVVGLMRKI 214 >UniRef50_C3X801 ImpA n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X801_OXAFO Length = 140 Score = 137 bits (347), Expect = 9e-32, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 1/133 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +L + +T + GFP P D +DLN L+ +P +++ + GDSM GI Sbjct: 7 PELSDSITRNRIENTSVAGFPIPHTDSANTMVDLNAQLLVNPCSSFLFRMKGDSMEGIGI 66 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 +GD ++VD +I H IV+ D E+ V++L R V+L+P N Y P+ ++ L Sbjct: 67 YEGDTIVVDRSIDPQHNHIVLGVADQEYLVRRLYKRGRTVRLMPENEKYRPLELTEGREL 126 Query: 126 DVFGVVIHVVKAM 138 ++GVV ++ + Sbjct: 127 QIWGVVTASIRKL 139 >UniRef50_B3QTL1 Transcriptional regulator, XRE family n=2 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QTL1_CHLT3 Length = 270 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 49/126 (38%), Positives = 74/126 (58%), Gaps = 1/126 (0%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 +V P+F V G ++ +E+ I L +L++HP +Y V+ASG+SM+ GI GDL Sbjct: 142 MVEIPVFMHRVSAGPAVASSSEIEEYIKLPTVLLKHPKRSYAVRASGNSMVGAGIHSGDL 201 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGV 130 LIVD H IVIA+++GE TVK+L + + L P NS Y I+ E + GV Sbjct: 202 LIVDQEAAIKHKCIVIASINGEQTVKRLLIEDGELVLAPENSHYQSTPITKEMNFSILGV 261 Query: 131 VIHVVK 136 V+H+++ Sbjct: 262 VMHIIR 267 >UniRef50_D2TWH9 LexA repressor n=1 Tax=Arsenophonus nasoniae RepID=D2TWH9_9ENTR Length = 213 Score = 137 bits (346), Expect = 1e-31, Method: Composition-based stats. Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 4/132 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E PL V G P A +++E ++ + + PSA + ++ +G SM + GI Sbjct: 80 EENEDEGLPLIG-RVAAGEPLLAQEHIESHYRIDATIFR-PSADFLLRVNGMSMKNIGII 137 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS-SEDTL 125 DGDLL V +G IV+A +D E TVK+ + + V+LI N + PI + L Sbjct: 138 DGDLLAVHKTQQVHNGQIVVARIDDEVTVKRFKQAGSKVELIAENPEFEPIIVDLRTQNL 197 Query: 126 DVFGVVIHVVKA 137 + G+ + +++ Sbjct: 198 TIEGLAVGIIRN 209 >UniRef50_C7I583 LexA repressor n=2 Tax=Burkholderiales RepID=C7I583_THIIN Length = 243 Score = 137 bits (345), Expect = 1e-31, Method: Composition-based stats. Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 3/127 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E + PL V G P A +++EQ ++++ Y +K G SM D GI DGD Sbjct: 115 EQLCLPLVG-RVAAGHPILAQEHIEQTLNVDPGAFSVRPD-YLLKVRGMSMRDAGILDGD 172 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFG 129 +L V S+ TA G IV+A + E TVK+L+ ++L+P N ++PI + + + G Sbjct: 173 MLAVKSSQTAQSGQIVVARIGDEVTVKRLRLQADHIELLPANPEFAPIRVDASQPFAIEG 232 Query: 130 VVIHVVK 136 + + +++ Sbjct: 233 LAVGLLR 239 >UniRef50_B1I624 Putative prophage repressor n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I624_DESAP Length = 196 Score = 136 bits (343), Expect = 3e-31, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 5/130 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++V P+ V G P + + + + L + L T+ ++ G+SM D GI G Sbjct: 71 SQVVEVPVLG-RVPAGGPVVSEEVILDYLPLPRKLAS--EDTFCLEVRGESMQDLGIDSG 127 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVF 128 D ++V TA +G +VIA V+GE T K+ V L P N + P+ + + +++ Sbjct: 128 DYVLVRLQPTAENGQVVIARVEGEVTCKRYYRTDRVVSLEPANRRFRPLRLEAG-EIEIV 186 Query: 129 GVVIHVVKAM 138 GVV +V+K + Sbjct: 187 GVVTNVIKRV 196 >UniRef50_C7I5S2 Peptidase S24 and S26 domain protein n=1 Tax=Thiomonas intermedia K12 RepID=C7I5S2_THIIN Length = 165 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 3/131 (2%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + P+ + V GFPSPA D+ + +DLNQLL+++P AT+ +A+G SMI GI DGD Sbjct: 26 PVFRLPMGAARVAMGFPSPAEDFEDDSVDLNQLLVRNPPATFLYRATGWSMIQAGICDGD 85 Query: 71 LLIVDSAITASHGDIVIAAVDGEF-TVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVF 128 +LI+D ++ GD+VIA DG K L ++L N +PI +S + +++F Sbjct: 86 VLIMDRSVRPQDGDVVIAVWDGNAPVCKVLHVFDDRIELHSRNPRIAPIVLSPDTEVEIF 145 Query: 129 GVVIHVVKAMR 139 VV V + MR Sbjct: 146 AVV-GVARQMR 155 >UniRef50_Q0EWQ9 LexA repressor n=2 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EWQ9_9PROT Length = 194 Score = 135 bits (342), Expect = 3e-31, Method: Composition-based stats. Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + + PL GFPSPA + + I ++ L++HPSAT V+ GDSMI GI Sbjct: 63 VPTSKFLERPLVGS-APAGFPSPAEEALGDAISIDDYLVEHPSATVLVQVDGDSMIGAGI 121 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 + GD++IV I++A VDG+FT+K L+ L P N AY I ++ L Sbjct: 122 NSGDIMIVRRESRPRVDRIIVAIVDGDFTIKYLRKDKQGYFLEPANPAYP--IIRPDNDL 179 Query: 126 DVFGVVIHVVKAM 138 ++GVV+ + Sbjct: 180 QMYGVVVGQFRKY 192 >UniRef50_C6CX34 Transcriptional regulator, XRE family n=1 Tax=Paenibacillus sp. JDR-2 RepID=C6CX34_PAESJ Length = 215 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 4/131 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D E VT P+ + CG A +Y+E + I + ++++A GDSM I Sbjct: 84 VDESENVTLPVVG-KISCGNGQIAYEYIEGYESTPRSWI-NGGEYFYLRAKGDSMQGARI 141 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSED-T 124 DGDLL++ G+I + E +K++ + T+ L N+ Y PI ++ + Sbjct: 142 FDGDLLLIRKQEEVEDGEIAAVLIGEEAVLKRVYRQGTTLVLQSENANYPPIICTAGENN 201 Query: 125 LDVFGVVIHVV 135 + V G + VV Sbjct: 202 IYVIGKLKKVV 212 >UniRef50_Q0VQU1 LexA repressor n=120 Tax=Proteobacteria RepID=LEXA_ALCBS Length = 204 Score = 135 bits (341), Expect = 4e-31, Method: Composition-based stats. Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 4/125 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ V G P A + VE+ + + Q L + TY +K GDSM+D GI DGDL+ Sbjct: 79 ELPVVG-KVAAGIPIEAIENVERTVPVPQGLFKQRP-TYLLKVQGDSMVDAGIFDGDLIA 136 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 V + A G+IV+A +D E TVK L+L + L+P N AY PI + D L + G+ + Sbjct: 137 VRKSNVARSGEIVVARIDEEVTVKTLKLNKSSATLLPANEAYEPIKV-PADQLIIEGIFV 195 Query: 133 HVVKA 137 +++ Sbjct: 196 GLIRD 200 >UniRef50_B2A7U7 LexA repressor n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A7U7_NATTJ Length = 815 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 43/130 (33%), Positives = 74/130 (56%), Gaps = 3/130 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 ++ E V ++ + + G A ++ ++L + ++ +P + ++ +GDSMI+ GI Sbjct: 687 EVSEYVKLNVYGE-LTAGELKYAHQDIQGDVELPKEIVPNPDNCFMLEVTGDSMINAGID 745 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLD 126 GD +IV A + DIV+A +D E T+KK ++ T+ L+P N Y PI +S ED L Sbjct: 746 KGDYVIVQKQNYAENLDIVVAVIDQEATLKKYSRMGDTILLMPENKNYEPIIVSEED-LI 804 Query: 127 VFGVVIHVVK 136 + G VI V+K Sbjct: 805 INGKVIGVLK 814 >UniRef50_A5KLL6 LexA repressor n=6 Tax=Firmicutes RepID=A5KLL6_9FIRM Length = 205 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 6/130 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 RE+V P+ V G P A + +E + + + T+F+K G+SMI+ GI DG Sbjct: 80 REMVHVPIIGQ-VAAGEPILAQENIEDYWPVPADRMPN-KQTFFLKVKGESMINAGILDG 137 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTV-QLIPMNSAYSPITISSEDTLDVF 128 D+++V+ TAS+GD+V+A ++ TVK V +L P N PI + + + Sbjct: 138 DMVLVEEDSTASNGDMVVALIEDGATVKTFYKEEGVFRLQPENDFMDPIIVK---NVTIL 194 Query: 129 GVVIHVVKAM 138 G VI V++ Sbjct: 195 GKVIAVMRFF 204 >UniRef50_B5Y8K2 LexA repressor n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y8K2_COPPD Length = 198 Score = 135 bits (340), Expect = 5e-31, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 7/128 (5%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + PL V G + A + +E + + + + +P+ + +K GDSM GI +GD++ Sbjct: 75 MEVPLIG-KVTAGLKTLAVEELEGYLSM-EDIFANPNQ-FGLKVKGDSMQGAGILEGDVV 131 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFGV 130 IV+S +GDI++A +D TVK+++ L P N Y P+ ++ + + + G Sbjct: 132 IVNSDAEWINGDIIVAIIDEMATVKRVKQDKYGNWWLEPDNPKYEPLPLN--EEVQIVGK 189 Query: 131 VIHVVKAM 138 V+ V++ Sbjct: 190 VVAVIRKY 197 >UniRef50_Q1QXT3 UmuD protein. Serine peptidase. MEROPS family S24 n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXT3_CHRSD Length = 146 Score = 135 bits (340), Expect = 6e-31, Method: Composition-based stats. Identities = 56/138 (40%), Positives = 81/138 (58%), Gaps = 7/138 (5%) Query: 5 KPADLREIVTFPLFSDLVQCG---FPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 PA + PL ++ G FPSPA DYV + +DLN+ L++ P+AT+F+ +GDSM Sbjct: 10 HPAPPYRALPHPLV--TIRAGISGFPSPAEDYVGRTLDLNERLVKRPAATFFMTVAGDSM 67 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITIS 120 +D GI DGD L+VD +I A G IV+A VDGE VK+ ++ L N Y+PI ++ Sbjct: 68 VDFGIQDGDTLVVDRSIDAKPGHIVVALVDGEVIVKRYEIIGRRPYLCSGNFQYAPIPLA 127 Query: 121 SEDTLDVFGVVIHVVKAM 138 + V+GVV V+ Sbjct: 128 NI-ECQVWGVVRSVIHEF 144 >UniRef50_B6FPF9 Putative uncharacterized protein n=2 Tax=Bacteria RepID=B6FPF9_9CLOT Length = 200 Score = 134 bits (339), Expect = 6e-31, Method: Composition-based stats. Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 7/122 (5%) Query: 20 DLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAIT 79 V CG P +Y+E+ + L L + ++ASGDSMI GI+ GD++++ T Sbjct: 82 GSVSCGMPQLEEEYIEEYVSLPVSLFG-EGEFFILRASGDSMIGAGINSGDMIVIRKQNT 140 Query: 80 ASHGDIVIAAVDGEFTVKKLQ---LRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVK 136 AS GDIV+A VD E T+K+ R V+L P N Y I V GV +HV+K Sbjct: 141 ASDGDIVVALVDNESTLKRFFLDTERRCVRLHPENPKYPDIY---TQNCTVQGVAVHVIK 197 Query: 137 AM 138 ++ Sbjct: 198 SL 199 >UniRef50_C6P1S3 LexA repressor n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P1S3_9PROT Length = 198 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 3/133 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 R+ PL VQ G P + + ++++L+ PS T + GDSMID GI Sbjct: 68 PSRQFFARPLAEATVQAGMPVAVNETHGEYFVIDEMLVDKPSTTTMITVKGDSMIDAGIH 127 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLD 126 +GD+ +V+ A+ GDIV+A VD EFT+K L + R L P N AY I + TL+ Sbjct: 128 EGDVAVVEKRHVANIGDIVVAIVDNEFTLKTLDKERGQYILRPANPAYP--VIRPQGTLE 185 Query: 127 VFGVVIHVVKAMR 139 +FGV++ +++ R Sbjct: 186 IFGVLVGLIRKYR 198 >UniRef50_A7G232 LexA repressor n=11 Tax=Clostridium RepID=A7G232_CLOBH Length = 535 Score = 134 bits (339), Expect = 7e-31, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 E+ P+F+D + G P VE ++ + ++ + +K GDSMI I Sbjct: 406 KEDELTKLPVFND-IAAGEPILMNPCVEGEFNIPKYWVRGMKNCFILKVKGDSMIGANIE 464 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTLD 126 DGD +++ A + DIV +DG T+K+ L + L+P N Y PI I E+ Sbjct: 465 DGDHVVIKRQQMAENKDIVAVNLDGSATLKRLLIKKSGAVLMPENKKYKPIEI-LEEGAS 523 Query: 127 VFGVVIHVVK 136 + G+ + ++K Sbjct: 524 IIGIAVGIIK 533 >UniRef50_C1A3U3 LexA repressor n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A3U3_GEMAT Length = 202 Score = 134 bits (337), Expect = 1e-30, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 7/141 (4%) Query: 2 LFIKPADL-REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 + I P+++ + V PL V G P A + + + + ++ + Y ++ GDS Sbjct: 65 IEILPSEIYQRSVELPLLGS-VAAGAPIEAV-HSGETMAVPDGFLRRNGSHYVLRVRGDS 122 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQ--LRPTVQLIPMNSAYSPI 117 MI+ I DGD ++++ A +G++VIA +DG TVK+ ++L P N P+ Sbjct: 123 MIEEHIRDGDFVVINDKQAADNGEMVIALLDGSGATVKRYYRERDGRIRLQPANETMQPL 182 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 + D + + G+V+ V++ Sbjct: 183 FVHE-DDVRIQGIVVGVLRRY 202 >UniRef50_A6VMQ0 LexA repressor n=181 Tax=Proteobacteria RepID=LEXA_ACTSZ Length = 210 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 5/126 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL V G P A ++E ++ + + P A + +K +G SM + GI DGDLL V Sbjct: 83 LPLIGQ-VAAGEPILAEQHIEGTYRVDPDMFK-PQADFLLKVNGQSMKNIGILDGDLLAV 140 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS--SEDTLDVFGVV 131 S +G +++A ++ E TVK+L+ + + L N ++PI ++ ++ ++ G+ Sbjct: 141 HSTKDVRNGQVIVARIEDEVTVKRLERKGDVIYLHAENEEFAPIVVNLREQERFEIEGIA 200 Query: 132 IHVVKA 137 + +++ Sbjct: 201 VGIIRN 206 >UniRef50_B2T6T4 LexA repressor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2T6T4_BURPP Length = 199 Score = 133 bits (335), Expect = 2e-30, Method: Composition-based stats. Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 5/134 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A R P+ V+ G P P + + ++ L+ P+ T + G+SM D G+ Sbjct: 67 APTRRFFGRPVLGA-VRAGQPQPEGQEPPELLTIDDYLVDDPNRTVLCRVRGESMRDVGL 125 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVK--KLQLRPTVQLIPMNSAYSPITISSEDT 124 DGDL++V+ GDIV+A VDGE TVK +L L P N + I + + Sbjct: 126 LDGDLVVVEKNRPTRPGDIVVAVVDGEMTVKTLRLDKNGAYYLEPANQDFQ--VIRPQGS 183 Query: 125 LDVFGVVIHVVKAM 138 L++ GVV+ V+ Sbjct: 184 LEIVGVVVGSVRKY 197 >UniRef50_A9HJ64 LexA repressor n=48 Tax=Alphaproteobacteria RepID=LEXA_GLUDA Length = 253 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 5/134 (3%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A + P + + G P A +I++ L+ H Y ++ +GDSMI+ GI Sbjct: 123 ATEAGAIHLPFYG-RIAAGQPIEALRETGAQIEVPMNLLGHGEH-YALEVAGDSMIEAGI 180 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT 124 DGD +I+ A +G IV+A +D E T+K+L+ R + + L P N+ Y P + D Sbjct: 181 LDGDTVIIRRGDVAQNGQIVVALIDDQEVTLKRLRRRGSTIALEPANARYEPRIV-PSDR 239 Query: 125 LDVFGVVIHVVKAM 138 + + G ++ +++ Sbjct: 240 VRIQGQLVGLLRRY 253 >UniRef50_B2S5Z4 LexA repressor n=65 Tax=Alphaproteobacteria RepID=LEXA_BRUA1 Length = 240 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 5/136 (3%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDG 64 + ++ V+ P+ + G P A + L +I Y ++ GDSMID Sbjct: 108 QNSEAPATVSVPVMG-RIAAGVPISAIQNQTHMLSLPPEMIGAGEH-YALEVKGDSMIDA 165 Query: 65 GISDGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLRP-TVQLIPMNSAYSPITISSE 122 GI DGD +I+ TA+ G+IV+A VD E T+K+ + ++ L N AY Sbjct: 166 GIFDGDTVIIKRGDTANPGEIVVALVDEEEATLKRFRREGASIALEAANPAYETRIFGP- 224 Query: 123 DTLDVFGVVIHVVKAM 138 D + V G ++ +++ Sbjct: 225 DRVHVQGKLVGLIRRY 240 >UniRef50_B4SRA9 LexA repressor n=54 Tax=Proteobacteria RepID=LEXA_STRM5 Length = 211 Score = 132 bits (332), Expect = 4e-30, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 3/138 (2%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 +P ++ P+ V G P A + + L+++ P+ Y +K GDSMI Sbjct: 76 LAEPGLPDNVLRLPVLG-RVAAGLPIGADIGSDDFVVLDRVFFS-PAPDYLLKVQGDSMI 133 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISS 121 D GI DGDL+ V A G IV+A +D E TVK L++ + ++L+P N Y PI + Sbjct: 134 DEGIFDGDLIGVHRTRDAHSGQIVVARIDDEITVKLLKIAKDRIRLLPRNPDYKPIEVLP 193 Query: 122 EDTLDVFGVVIHVVKAMR 139 + + G+ +++ R Sbjct: 194 DQDFSIEGLYCGLLRPNR 211 >UniRef50_B8GQJ6 Repressor lexA n=3 Tax=Gammaproteobacteria RepID=B8GQJ6_THISH Length = 154 Score = 132 bits (332), Expect = 5e-30, Method: Composition-based stats. Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 P D E PL V G P E+R+ + +++ TY ++ G SM Sbjct: 23 FEAAPVDTCE---IPLLG-WVAAGLPVDLCSN-EERVSVPAHMVRR--NTYALRVRGHSM 75 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQ-LRPTVQLIPMNSAYSPITI 119 ID I DGD+++V+ +A +G V+A ++GE T+KK R ++L P N PI + Sbjct: 76 IDDNIQDGDIIVVERRQSAENGQTVVAMINGEQVTLKKFYVEREGIRLQPANPDMEPIIL 135 Query: 120 SSEDTLDVFGVVIHVVKAMR 139 + +++ G+V V++ MR Sbjct: 136 R-NEEIEILGIVTGVIRDMR 154 >UniRef50_Q121D8 UmuD protein. Serine peptidase. MEROPS family S24 n=2 Tax=Comamonadaceae RepID=Q121D8_POLSJ Length = 146 Score = 131 bits (331), Expect = 5e-30, Method: Composition-based stats. Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 1/127 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + V+ GFPSPA D +R++L LL +F+ ASG SM+ GI DGDLL Sbjct: 18 MPVKRIRGTVKAGFPSPAEDLGAERLNLASLLGSDKEDAFFMMASGHSMVKFGIFDGDLL 77 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVV 131 ++ G IVIA VDGEF VK L R V+L+ N + T+ V+GVV Sbjct: 78 LIRKRKRPRDGHIVIADVDGEFLVKMLYKRAGQVKLVSGNPEIPDLEPKDGQTIRVWGVV 137 Query: 132 IHVVKAM 138 +K Sbjct: 138 TSSIKTF 144 >UniRef50_Q4PJ96 Predicted SOS-response transcriptional repressor n=6 Tax=Bacteria RepID=Q4PJ96_9BACT Length = 131 Score = 131 bits (331), Expect = 6e-30, Method: Composition-based stats. Identities = 47/128 (36%), Positives = 71/128 (55%), Gaps = 2/128 (1%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 +T P + GFPSPA DY+E+ IDLN LI++ AT+ ++ G SM++ GI DGDLL Sbjct: 3 LTIPYYLHKAGAGFPSPATDYIEEDIDLNVHLIKNVPATFIIRVQGKSMVNAGIYDGDLL 62 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSP-ITISSEDTLDVFGV 130 +VD ++ + VIA V E VK L + + I I+ E + V+GV Sbjct: 63 VVDKSLKPKNFSTVIANVHDELVVKNFVKEKDRQFLTSGSKKFEDRILINEEADVFVWGV 122 Query: 131 VIHVVKAM 138 V +V+ ++ Sbjct: 123 VTYVIHSV 130 >UniRef50_C6X823 LexA repressor n=2 Tax=Betaproteobacteria RepID=C6X823_METSD Length = 196 Score = 131 bits (330), Expect = 7e-30, Method: Composition-based stats. Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 3/123 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L VQ GFPS A+ + ++ LI+ PS T + GDSMID GI D++IV+ Sbjct: 75 LAESTVQAGFPSAASGDRHDTLSIDDYLIERPSQTVLITVKGDSMIDAGIVPDDVVIVEK 134 Query: 77 AITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ GDIV+A VD EFT+K L + + L+P N AY I + L++FGVV+ Sbjct: 135 RQVANVGDIVVAIVDNEFTLKTLGREKGQFVLLPANKAYP--VIRPQGNLEIFGVVVGQF 192 Query: 136 KAM 138 + Sbjct: 193 RKY 195 >UniRef50_C0QZ34 LexA repressor n=2 Tax=Brachyspira RepID=C0QZ34_BRAHW Length = 208 Score = 130 bits (329), Expect = 1e-29, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 71/133 (53%), Gaps = 10/133 (7%) Query: 10 REIVTFPLFSDLVQCGFPSP-AADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++ PL ++ V+ G A + VE+ L + + Q + + +K GDSMI+ I + Sbjct: 77 HNMIKIPLLANEVKAGLLMDVADETVEETYSLPKSIAQDENN-FLMKVIGDSMINAHIKE 135 Query: 69 GDLLIVDSAITASHGDIVIAAVDG----EFTVKKLQLR-PTVQLIPMNSAYSPITISSED 123 GD+++V + A +GDIV+A +D E T+K+ V+L+ N+ Y PI + Sbjct: 136 GDMVLVHPSNEADNGDIVVAKIDDNGNEEITIKRFFREKDCVKLVSENNNYPPI---ERE 192 Query: 124 TLDVFGVVIHVVK 136 ++ + G VI +++ Sbjct: 193 SISIVGKVIGLIR 205 >UniRef50_C5AU37 LexA repressor n=6 Tax=Rhizobiales RepID=C5AU37_METEA Length = 258 Score = 130 bits (328), Expect = 1e-29, Method: Composition-based stats. Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 5/130 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + V P+ + G P A + I ++ + Y ++ GDSMI+ GI DGD Sbjct: 132 QSVMVPVMG-RIAAGVPISAIESQSHSISMSPDFLSGGEH-YALEVRGDSMIEAGILDGD 189 Query: 71 LLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVF 128 L+++ TA++GDI++A +D E T+K+L+ R ++ L N AY + D + + Sbjct: 190 LVVIHKQETANNGDIIVALIDDEEATLKRLRRRGSSIALEAANPAYETRVLGP-DRVRIQ 248 Query: 129 GVVIHVVKAM 138 G ++ +V+ Sbjct: 249 GKLVSLVRRY 258 >UniRef50_Q04RH1 LexA repressor n=6 Tax=Leptospira RepID=LEXA_LEPBJ Length = 203 Score = 130 bits (327), Expect = 2e-29, Method: Composition-based stats. Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 5/127 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + P+ V G P A + +E I + + + Y ++ GDSMI+ GI GD Sbjct: 79 QATSIPVIG-RVAAGLPIFADENIESYIPVPDEMAKGNVPMYALRVQGDSMIEVGIDSGD 137 Query: 71 LLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFG 129 + I++ A +G+IV+A ++ E T+K ++L N Y PI V G Sbjct: 138 IAIIEKRDIARNGEIVVALIEDEATLKVYYKEQDQIRLEARNPKYKPIKTKKA---TVIG 194 Query: 130 VVIHVVK 136 ++ + + Sbjct: 195 KLVGLYR 201 >UniRef50_D0IYW8 DNA polymerase V n=2 Tax=Comamonas testosteroni CNB-2 RepID=D0IYW8_COMTE Length = 136 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 VT PL + G SPA D+ +R+D+ LL+ HP AT+ ++ +G SM + GI DGD++ Sbjct: 10 VTLPLADRSARAG--SPANDFAGKRLDITDLLVTHPKATFLLRVAGPSMQEHGIDDGDIV 67 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVV 131 +VD + A G IV+A V+ E ++ L T +L Y I TL+++GVV Sbjct: 68 VVDRELRARDGSIVVAVVERELVIRALDSDGDTCKLRAGAPTYPDIVPPEGQTLEIWGVV 127 Query: 132 IHVVKAM 138 +K Sbjct: 128 TSCIKRF 134 >UniRef50_Q03B55 LexA repressor n=14 Tax=Lactobacillus RepID=LEXA_LACC3 Length = 208 Score = 129 bits (326), Expect = 2e-29, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 6/125 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ V G P A + ++ + L + ++ G+SMI GI DGD +IV Sbjct: 85 IPIVG-TVAAGVPITAIENIDDYFPVPDDLPYAADELFMLRVQGNSMIKIGILDGDQIIV 143 Query: 75 DSAITASHGDIVIAAV-DGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +G IV+A + E TVK+ ++L P N + + + + G+V+ Sbjct: 144 KKQNDAENGQIVVAMTEEDEATVKRFYKEKNGIRLHPENDSMDDMFFP---DVTILGIVV 200 Query: 133 HVVKA 137 + + Sbjct: 201 SLYRP 205 >UniRef50_A1WXU3 LexA repressor n=46 Tax=Proteobacteria RepID=LEXA_HALHL Length = 226 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 4/134 (2%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PA P+ V G P A + +E+ ++ L P A Y ++ G+SM D G Sbjct: 81 PATDDPNAGLPVVG-RVAAGSPLLAEESIERYCQVDASLFS-PPADYLLRVRGESMRDAG 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSE-D 123 I DGDLL V A G IV+ + E TVK L+ ++LIP + Y I ++++ Sbjct: 139 ILDGDLLAVRRDTEARDGQIVVVRLHDEVTVKFLERCNGVLRLIPAHPDYPVIEVAADGQ 198 Query: 124 TLDVFGVVIHVVKA 137 + G+ + V+++ Sbjct: 199 DAVLEGIGVGVLRS 212 >UniRef50_B2VA45 Transcriptional repressor, LexA family n=2 Tax=Hydrogenothermaceae RepID=B2VA45_SULSY Length = 210 Score = 129 bits (325), Expect = 3e-29, Method: Composition-based stats. Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 8/142 (5%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ P + + P + + G P + + IDL+ +L Y ++ G+S Sbjct: 63 IVEKSPKNENSFIF-PYYG-TISAGKPIAIENQTFEYIDLSDIL--RCENCYALRVKGNS 118 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPI 117 MI I + D++IV++ A +G+IV+A +DG E T+KK ++L+P N Y P+ Sbjct: 119 MIGEFILNDDIIIVENRKEALNGEIVVAVIDGEETTLKKFYNLGNGYIKLVPANPDYEPM 178 Query: 118 TISSEDTLDVFGVVIHVVKAMR 139 I D +++ GV+ +V++ + Sbjct: 179 -IYEADRVEIQGVLKGIVRSFK 199 >UniRef50_A8F429 LexA repressor n=7 Tax=Thermotogaceae RepID=LEXA_THELT Length = 200 Score = 128 bits (324), Expect = 3e-29, Method: Composition-based stats. Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + E + P+ + G A + + I++ + +I+ + ++ G+SMI+ I Sbjct: 69 NRSEAIRLPVVG-TIAAGNAIEAIENPTEIIEVPKAMIKIGFDHFLLRVRGESMIEEHIL 127 Query: 68 DGDLLIVDSAITASHGDIVIAAVD-GEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 D D +++ TA++GDIV + E T+KK+ + P + L P NS PI + + + Sbjct: 128 DKDYVVIRKQNTANNGDIVAVLTNSNEATLKKIYIEPEKIILKPANSKMQPIELKP-ENV 186 Query: 126 DVFGVVIHVVK 136 + G ++ V++ Sbjct: 187 KILGKMVGVIR 197 >UniRef50_A4YVE6 LexA repressor n=23 Tax=Alphaproteobacteria RepID=LEXA_BRASO Length = 232 Score = 128 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 5/133 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D V P+ + G P A I + ++ + Y ++ GDSM+D GI Sbjct: 103 DGERPVAVPVMG-RIAAGTPIEALQTRSHTISVPADMLGNGDH-YALEVRGDSMVDAGIL 160 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTL 125 DGD+ ++ TA GDIV+A +D E T+K+ + R ++ L P N+AY + + Sbjct: 161 DGDMALIQRNETADTGDIVVALIDDEEATLKRFRRRGASIALEPANTAYEVRILPPN-RV 219 Query: 126 DVFGVVIHVVKAM 138 + G ++ + + Sbjct: 220 KIQGKLVGLYRKY 232 >UniRef50_C3RNC9 SOS-response transcriptional repressor n=3 Tax=Bacteria RepID=C3RNC9_9MOLU Length = 206 Score = 128 bits (324), Expect = 4e-29, Method: Composition-based stats. Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 7/141 (4%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + + +T PL+SD + CG D V++ I L + L+ + A GDSMI Sbjct: 66 ESNQPIITDSITIPLYSD-ISCGTGLFVDDNVDEYISLPETLLSPSKEYFCQYADGDSMI 124 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGE-FTVKKLQLRPT---VQLIPMNSAYSPIT 118 + I+ GDL++ + + +G++ +D T KK + L P N Y+PI Sbjct: 125 NENINQGDLIVFEKSNQIRNGEVGCFTIDDNVATCKKFYRDDNNHCIILQPANPEYTPIV 184 Query: 119 ISSEDT--LDVFGVVIHVVKA 137 I+ E V G + V+ Sbjct: 185 INQESQAGFRVIGKLTLVINK 205 >UniRef50_C8P7V8 LexA repressor n=1 Tax=Lactobacillus antri DSM 16041 RepID=C8P7V8_9LACO Length = 222 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 11/139 (7%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 +L IKP PL V G P A + + IQ + Y + G S Sbjct: 90 LLGIKPLQT----KIPLLGV-VTAGQPILAVEDATDYFPIPPS-IQDHNDLYMLTIRGTS 143 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAV-DGEFTVKKLQLR-PTVQLIPMNSAYSPIT 118 MI GI +GD +IV TA +GDIVIA D E T K+ +L P N PI Sbjct: 144 MIKAGILNGDQVIVRKQSTAKNGDIVIAMNEDNEATCKRFFKEKDRFRLQPENDTMDPIY 203 Query: 119 ISSEDTLDVFGVVIHVVKA 137 + + + G V+ + + Sbjct: 204 LK---NVKILGRVVGLFRD 219 >UniRef50_Q7NMQ6 LexA repressor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NMQ6_GLOVI Length = 191 Score = 128 bits (323), Expect = 5e-29, Method: Composition-based stats. Identities = 41/112 (36%), Positives = 66/112 (58%), Gaps = 2/112 (1%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYV-EQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 +++ PL + V G P + + R+ L++ L++ + T+ ++ GDSMI+ GI + Sbjct: 63 PDLLGIPLLENRVPAGSPVTVEEDLLNSRMSLDEYLVEERTGTFLLRVKGDSMIEAGIFE 122 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITI 119 GD+++V+ A+ GD+VIA VDGE T+K L+ R L P NS YSPI Sbjct: 123 GDIVVVNQNRRAADGDVVIARVDGEMTLKTLRRRNQQTWLEPANSRYSPIHP 174 >UniRef50_Q1H0D8 LexA repressor n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H0D8_METFK Length = 194 Score = 128 bits (322), Expect = 6e-29, Method: Composition-based stats. Identities = 44/123 (35%), Positives = 64/123 (52%), Gaps = 3/123 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 + VQ GF +PA + ++ LI+ PS T + GDSM D GI DGD++IV+ Sbjct: 73 IAESTVQAGFATPAYGDSLDTMGIDDYLIEKPSQTILITVRGDSMKDAGIFDGDVVIVEK 132 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIHVV 135 A+ GDIV+A ++ EFT+K L LIP N + I E ++FGVV+ Sbjct: 133 RPFANVGDIVVAILNKEFTLKTLGKEGNQFVLIPANKDFP--VIRPEGDFEIFGVVVGQF 190 Query: 136 KAM 138 + Sbjct: 191 RKY 193 >UniRef50_A1JLR5 Putative uv protection and mutation protein n=1 Tax=Yersinia enterocolitica subsp. enterocolitica 8081 RepID=A1JLR5_YERE8 Length = 137 Score = 127 bits (321), Expect = 9e-29, Method: Composition-based stats. Identities = 49/123 (39%), Positives = 80/123 (65%), Gaps = 2/123 (1%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 F + F + A DY+E+RID+N+ I HP+AT+F+ A G+S+I GI G LL++D + Sbjct: 16 FGGPMSA-FGNAAQDYIEKRIDINEHCIVHPAATFFMTAEGESLIAAGIHHGALLVIDRS 74 Query: 78 ITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPITI-SSEDTLDVFGVVIHVVK 136 + A HGDIV+A + GEF++K+L LRPT +L +N+ + + ++ L +FGV+ + Sbjct: 75 LPAKHGDIVVATIGGEFSIKRLYLRPTPRLEALNAGTPALILCEGDEDLVIFGVITFCIN 134 Query: 137 AMR 139 +R Sbjct: 135 KLR 137 >UniRef50_B8GPZ6 LexA repressor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GPZ6_THISH Length = 197 Score = 127 bits (320), Expect = 1e-28, Method: Composition-based stats. Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 ++P + PL + G P A E +DL L+ Y ++ G+SM+ Sbjct: 64 LRPTGSDAAFSLPLVG-RIAAGRPIEAIPG-EDTLDLADFLLG--PGRYALRVVGESMVG 119 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPITIS 120 GI DGD ++V A +A GDIV+A +D E T+K+++ V+L N A +P+ Sbjct: 120 AGILDGDTVVVQQADSARDGDIVVALIDDEEATLKRIRHRPDGQVELRAENPAMAPLVYD 179 Query: 121 SEDTLDVFGVVIHVVKAMR 139 + + + GVV+ ++ R Sbjct: 180 AA-RVRIQGVVVGQLRGYR 197 >UniRef50_B7GH61 SOS-response transcriptional repressor LexA (HTH, RecA-mediated autopeptidase) n=3 Tax=Bacillales RepID=B7GH61_ANOFW Length = 195 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%) Query: 4 IKPADL--REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 +PA E P+ + CG A + ++ ++ + + +F++A GDSM Sbjct: 58 EEPAQYICTEFSRLPIIGS-ISCGDGVIAYEEIKGYEEVPSSWL-NGGEYFFLEARGDSM 115 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITIS 120 I+ I+DG LL++ +G+I +DGE +K++ T+ L N Y PI + Sbjct: 116 INAHITDGALLLIRRQNDVDNGEIAAVLIDGEAVLKRVYKTEDTIILQSENPMYKPIILK 175 Query: 121 SED--TLDVFGVVIHVV 135 D + + G + V+ Sbjct: 176 RNDMKDVRIIGKLKKVI 192 >UniRef50_C1SPQ3 LexA repressor n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SPQ3_9BACT Length = 201 Score = 126 bits (318), Expect = 2e-28, Method: Composition-based stats. Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 3/123 (2%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P A + +E + L++L I+ +F+K GDSM D I GD +++ Sbjct: 70 IPVVG-RIVAGVPVEAEENIEGYMKLDRLTIRSGGH-FFLKVDGDSMKDEAILHGDYVLI 127 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 ++G I ++GE T+K + + L+P N A+ PI + D +V G + Sbjct: 128 KPGPIITNGQIGAFRINGEVTLKTFRQNAEGIYLMPANEAFEPIPVGEYDDFEVIGTLKM 187 Query: 134 VVK 136 V++ Sbjct: 188 VLR 190 >UniRef50_C5RGU3 Peptidase S24 and S26 domain protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RGU3_CLOCL Length = 648 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 67/132 (50%), Gaps = 3/132 (2%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + E+ P+F++ + G P + L + +++ + +K SGDSMI+ + Sbjct: 518 VEESELKRIPVFNN-IAAGSPILINEEESDGFFLPKAFLKNNKEFFMLKVSGDSMINANL 576 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTL 125 ++ D +I++ + + I A+ E T+K+++++ V LI N Y P+ + S+D + Sbjct: 577 NNEDYVIIERSAQVDNMQIAAVAIGEEATLKRIKIKGNSVTLISENQNYPPMMVHSKD-V 635 Query: 126 DVFGVVIHVVKA 137 + G + V+K Sbjct: 636 RILGNAVGVIKK 647 >UniRef50_D1N447 LexA repressor n=2 Tax=Lentisphaerae RepID=D1N447_9BACT Length = 209 Score = 126 bits (317), Expect = 2e-28, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQH--PSATYFVKASGDSMIDGGISDGDLL 72 PL V G PS + ++ E + ++ ++ P + ++ G+SM D GI DGD++ Sbjct: 83 IPLLG-RVNAGLPSESIEFKEGEVCISNTMLGEHTPEQMFALRVQGESMRDLGIYDGDIV 141 Query: 73 IVDS-AITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPITISSEDTLDVFG 129 I A GDIV+A V GE TVK + ++L P N +S + + + + G Sbjct: 142 ICGQGASKPRPGDIVVALVQGEVTVKSYFPKTGGRIELRPANPDFS-VQVYPIADVTIQG 200 Query: 130 VVIHVVKAM 138 V+ + + Sbjct: 201 KVVGLHRKY 209 >UniRef50_Q03WX0 LexA repressor n=7 Tax=Firmicutes RepID=LEXA_LEUMM Length = 212 Score = 125 bits (315), Expect = 4e-28, Method: Composition-based stats. Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 7/127 (5%) Query: 14 TFPLFSDLVQCGFPSPA-ADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 P+ +V G P A + + + L+Q + + GDSM++ GI DGD + Sbjct: 87 KIPVLG-MVTAGTPILAVEEEATEFFPIPDNLMQFDGDLFMLNVHGDSMVNIGILDGDKV 145 Query: 73 IVDSAITASHGDIVIAAVD-GEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGV 130 IV A +GD+V+A D E TVK+ +L P N++ +PI + + + G Sbjct: 146 IVRKQENADNGDVVVAMNDNNEATVKRFFREADHYRLQPENNSMAPIIL---QKVSILGK 202 Query: 131 VIHVVKA 137 VI + + Sbjct: 203 VIGLYRD 209 >UniRef50_Q2G6Q5 LexA repressor n=29 Tax=Alphaproteobacteria RepID=LEXA_NOVAD Length = 234 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 6/132 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +++ PL + G P A + + + L+ Y ++ SGDSM++ GI DG Sbjct: 107 NDVIELPLHG-KIAAGVPIEALETT-ATLPVPAALLGAGEH-YALEVSGDSMVEAGIFDG 163 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDV 127 D +V A G+IV+A V G E T+K L V+L P N+AY P + + V Sbjct: 164 DYALVRKTDVARDGEIVVALVRGEEATLKYLHREKGMVRLDPANAAYDPQYYRP-EEVAV 222 Query: 128 FGVVIHVVKAMR 139 G + +++ Sbjct: 223 QGKLAGLLRRYH 234 >UniRef50_Q8VMP5 RuvA protein n=5 Tax=cellular organisms RepID=Q8VMP5_PSEPU Length = 143 Score = 125 bits (314), Expect = 5e-28, Method: Composition-based stats. Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 3/135 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 ++ I+P V + + GFPSPAADY E I L++LL + + V+ G+S Sbjct: 3 VVSIQPLRDSRQV-LAVLAGSAAGGFPSPAADYYEPPISLDELLNIRAAHVFIVRVEGES 61 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR--PTVQLIPMNSAYSPIT 118 M D GI DG +LIVD +IT G IV+A VD + VK+L L N AY IT Sbjct: 62 MRDAGIFDGGVLIVDRSITPCSGQIVLAYVDNQPLVKRLAKAPGDGWLLESANPAYKTIT 121 Query: 119 ISSEDTLDVFGVVIH 133 ++DVFGVV Sbjct: 122 PDEYASVDVFGVVTW 136 >UniRef50_Q1IU64 LexA repressor n=3 Tax=Acidobacteria RepID=LEXA_ACIBL Length = 210 Score = 124 bits (313), Expect = 7e-28, Method: Composition-based stats. Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P + G P A + E I L + ++ SG+SM D I DGD ++V Sbjct: 90 LPFLG-RIAAGQPIEAIENPE-TISLGD--FTGSKEVFVLQVSGESMQDEHIVDGDYVLV 145 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 + TA G+IV+A V+ + T+K++ TV+L P N+ PI + + ++ V G VI Sbjct: 146 ERINTARDGEIVVALVENSDTTLKRIYREGETVRLQPSNAKMQPIRVPAG-SVQVQGRVI 204 Query: 133 HVVKAM 138 V++ Sbjct: 205 GVLRKY 210 >UniRef50_A4J3R4 Putative prophage repressor n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J3R4_DESRM Length = 210 Score = 124 bits (312), Expect = 1e-27, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 9/130 (6%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + G P A + ++ + + + ++ GDSMI I DGD++ Sbjct: 86 KIPIIGA-IAAGIPILAQENIDGYEYIPDNVSID----FCLRVKGDSMIGARILDGDIVY 140 Query: 74 VDSAITASHGDIVIAAVDG-EFTVKKLQ-LRPTVQLIPMNSAYSPITISSED--TLDVFG 129 + +G+I +D E T+K++ L +V L N Y S +D + + G Sbjct: 141 IRKQPQVENGEIAAVIIDNEEATLKRIYALNGSVILRAENPNYPDKVFSKKDMKQISIIG 200 Query: 130 VVIHVVKAMR 139 I +R Sbjct: 201 KAIFFKSEVR 210 >UniRef50_D2QVG3 Peptidase S24, S26A and S26B, conserved region n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QVG3_9SPHI Length = 178 Score = 123 bits (311), Expect = 1e-27, Method: Composition-based stats. Identities = 43/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 A ++ P +S V GF SPA Y+E+ DLN+L I + ATYFV+ DSM I Sbjct: 16 ATVQTTFFIPFYSYYVNAGFASPAESYIERACDLNELCIDNEEATYFVRVGSDSMSGDRI 75 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDT 124 GD+L+VD + S G IV+ +G+ VK+ + V L+ N Y PI + + Sbjct: 76 ERGDVLVVDCSKEPSDGKIVVVWYNGDHAVKRIYHVEKMVVLLSSNPKYDPIYVHPGED 134 >UniRef50_A9BGA3 LexA repressor n=1 Tax=Petrotoga mobilis SJ95 RepID=LEXA_PETMO Length = 205 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 4/122 (3%) Query: 18 FSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSA 77 S + G A + I + + ++ G+SMI+ I GD +++ Sbjct: 83 VSGKIAAGDAIEAIQTISDYIPIPTNFFPKNYEYFSLRVEGNSMIEAQIKSGDFVLIRKQ 142 Query: 78 ITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPITISSEDTLDVFGVVIHV 134 A GDIV+A +DG + T+K+ + V LIP N + I + + D L + G ++ + Sbjct: 143 DYAMDGDIVVALIDGNDATLKRYKRLNEDEVLLIPENKSMKEIKVKA-DHLKIQGKMVGL 201 Query: 135 VK 136 ++ Sbjct: 202 IR 203 >UniRef50_C6DZL6 LexA repressor n=3 Tax=Geobacter RepID=C6DZL6_GEOSM Length = 258 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 44/139 (31%), Positives = 67/139 (48%), Gaps = 5/139 (3%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 PA I+ PL V G P A + I++ + + Y + GDSM Sbjct: 116 TLQTPAVAPIIMELPLVGI-VAAGRPVQAFQ-LADAIEVPSAMAGPGNVVY--EVRGDSM 171 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS 120 ++ GI DGD + V A G VIA V+G T+KK + +QL+P NSA SPI +S Sbjct: 172 VEMGIMDGDYVAVHQQAVAETGQTVIAEVNGSITIKKYVRKGNSIQLLPANSAMSPIAVS 231 Query: 121 SEDTLDVFGVVIHVVKAMR 139 +D + GV++ ++ + Sbjct: 232 EDDEFHIRGVLVGSMRFYK 250 >UniRef50_B8L8L2 SOS-response transcriptional repressor n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L8L2_9GAMM Length = 160 Score = 123 bits (309), Expect = 2e-27, Method: Composition-based stats. Identities = 46/113 (40%), Positives = 70/113 (61%), Gaps = 2/113 (1%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 PL + + GFPSPA D+++ IDL++LL+++P+AT+ +A G SM G+SDGD+L+ Sbjct: 25 FVPLAAARARLGFPSPADDFMDDAIDLHRLLVRNPAATFLYRADGWSMSGAGVSDGDILV 84 Query: 74 VDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSEDT 124 VD ++T GD+VIA DG + T K LQL ++L N + PI + Sbjct: 85 VDRSVTPQGGDLVIAIWDGNQPTCKVLQLFESHMELHSANPDFPPIVLEQSTE 137 >UniRef50_A3XET1 UmuD protein n=11 Tax=Proteobacteria RepID=A3XET1_9RHOB Length = 144 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 48/128 (37%), Positives = 71/128 (55%), Gaps = 5/128 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T P+ LV GFPSPA D +E ID +++HP++T++ + GD + D GI DGD++ Sbjct: 16 TVPIHLPLVSAGFPSPAGDDLEDEIDPIAWVVRHPTSTFWWRVEGDCLWDVGIRDGDIIA 75 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNS--AYSPITISSEDTLDVFGV 130 VD A G V+A VDG T K L+ R L P NS A+ I ++ + ++GV Sbjct: 76 VDRAGKRRLGRAVLAVVDGTVTAKILRKRDGKYFLSPANSQEAFPDIELTEDSE--IWGV 133 Query: 131 VIHVVKAM 138 + VV+ Sbjct: 134 IAGVVRRY 141 >UniRef50_Q9G0C2 ORF 221 n=1 Tax=Lactobacillus phage mv4 RepID=Q9G0C2_BPMV4 Length = 221 Score = 122 bits (308), Expect = 3e-27, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 9/136 (6%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRID--LNQLLIQHPSATYFVKASGDSMID 63 P D +V PL + CG P A +E I + P + + +K GDSM + Sbjct: 88 PVDQSHLVKIPLIGH-IACGEPITADQNIEGYITEYFPDHV--DPDSIFALKCEGDSM-E 143 Query: 64 GGISDGDLLIVDSAITASHGDIVIAAVDGE--FTVKKLQLRPT-VQLIPMNSAYSPITIS 120 I DGD+ + G+I VDG+ ++K+++ V L+P N YSPI + Sbjct: 144 PYILDGDIAYIRQQPEVEDGEIAAVLVDGDTRASLKRVKKVGNQVFLLPDNPHYSPIVLD 203 Query: 121 SEDTLDVFGVVIHVVK 136 + + G +I + + Sbjct: 204 QDHPGKIIGKMIKMSR 219 >UniRef50_B7RPS7 LexA repressor n=3 Tax=Rhodobacteraceae RepID=B7RPS7_9RHOB Length = 239 Score = 122 bits (307), Expect = 3e-27, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 4/126 (3%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P A + + + ++ Y ++ GDSMID GI+DGD++++ Sbjct: 116 IPMMG-RIAAGVPIEAISTMTHSVAVPGSMVSGRGEHYALEVKGDSMIDAGINDGDVVVI 174 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVI 132 A +GDIV+A V+ E T+K + ++ L N AY + D + V G ++ Sbjct: 175 RETSVADNGDIVVALVEDHEATLKTFKRHGSSIALEAANPAYETRVL-PADKVKVQGRLV 233 Query: 133 HVVKAM 138 +++ Sbjct: 234 GLIRTY 239 >UniRef50_C0WXK0 Possible repressor lexA n=3 Tax=Lactobacillus RepID=C0WXK0_LACFE Length = 212 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 60/130 (46%), Gaps = 6/130 (4%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 + + PL + CG P A + + + + ++++A G SM + I Sbjct: 82 PINRLTKIPLLG-TIACGDPILADENITDYLTEPVDYLPSGK-LFYLRAKGQSM-EPTIK 138 Query: 68 DGDLLIVDSAITASHGDI--VIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 +G L+++ G+I V+ D E T+K+++ T+ L+P N Y PI +S ++ Sbjct: 139 NGSLVLIRQQPEVEDGEIAAVLFTDDDEATLKRVKRSGDTMILLPDNRRYEPIIVSKDNP 198 Query: 125 LDVFGVVIHV 134 + + G + V Sbjct: 199 VRILGKAVRV 208 >UniRef50_Q1XGP5 Putative ultraviolet light resistance B protein RulA n=3 Tax=Pseudomonas RepID=Q1XGP5_PSEPU Length = 142 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 49/124 (39%), Positives = 64/124 (51%), Gaps = 1/124 (0%) Query: 13 VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLL 72 + L S GFPSPAADY E I L++LL + VK G+SM D GI G L Sbjct: 14 IPLQLLSCTAAGGFPSPAADYYEPPISLDELLNIRAPHIWIVKVEGESMRDAGIFTGTRL 73 Query: 73 IVDSAITASHGDIVIAAVDGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVV 131 I+D +TA G IV+A VD + VK+L + L N Y +T T++VFGVV Sbjct: 74 IIDRTVTACSGHIVMAYVDNQPVVKRLAKSAAGWTLESANPTYKAVTPDEYSTVEVFGVV 133 Query: 132 IHVV 135 + Sbjct: 134 TWSL 137 >UniRef50_C6LG10 LexA repressor n=2 Tax=Bacteria RepID=C6LG10_9FIRM Length = 206 Score = 122 bits (307), Expect = 4e-27, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++ VT + V G P A + ++ + + + ++ GDSM + S+G Sbjct: 75 KKGVTINVLG-RVAAGIPIEAITDIIDTEEIPEEMAAT-GEFFGLQIHGDSM-EPKFSEG 131 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSED---- 123 D++IV A GDIVIA ++G + T K+L+ R ++L+ N +Y P+ S+ED Sbjct: 132 DVVIVRQQDDAESGDIVIAMINGDDATCKRLRKYRDGIELVSTNPSYEPMFFSNEDIEQK 191 Query: 124 TLDVFGVVI 132 + + G V+ Sbjct: 192 PVKIIGKVV 200 >UniRef50_C4ZE14 LexA repressor n=6 Tax=Clostridiales RepID=C4ZE14_EUBR3 Length = 244 Score = 122 bits (306), Expect = 5e-27, Method: Composition-based stats. Identities = 38/134 (28%), Positives = 69/134 (51%), Gaps = 3/134 (2%) Query: 1 MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 M + A + + +F + V G + D ++ + +++ ++ T+ V+ SGDS Sbjct: 101 MYEKQTAKIIPFRSIDIFENAVSAGTGNFLVDGPKETVHIDESILP-EDTTFGVRISGDS 159 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITI 119 M + DG + V + ++G+I I A++GE +KKLQ + LI +N Y+PI + Sbjct: 160 M-EPEFHDGQIAWVLQQESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKV 218 Query: 120 SSEDTLDVFGVVIH 133 D LD+FG V+ Sbjct: 219 GENDRLDIFGKVLG 232 >UniRef50_A5D283 SOS-response transcriptional repressors n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D283_PELTS Length = 224 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 8/133 (6%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++ P+ V G + + + + + + ++ GDSM GI D Sbjct: 90 FNDMTGIPVLG-TVSAGELLYSEQNISGYLPFPRKMAD--GKYFALRVKGDSMTGEGIYD 146 Query: 69 GDLLIVDSAITAS-HGDIVIAAVDG-EFTVKKL--QLRPTVQLIPMNSAYSPITISSE-D 123 GDL+++ +G IV A V+G E T+K + L N AY I + D Sbjct: 147 GDLVLIRRQSHVDFNGQIVCALVNGEENTLKIFLQDENGNILLKAANPAYPDIVLQHGKD 206 Query: 124 TLDVFGVVIHVVK 136 L + GV V K Sbjct: 207 ALVIQGVFAGVFK 219 >UniRef50_D0E8J3 LexA repressor n=1 Tax=uncultured bacterium HF130_AEPn_1 RepID=D0E8J3_9BACT Length = 204 Score = 121 bits (305), Expect = 6e-27, Method: Composition-based stats. Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 9/127 (7%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 PL V G A + VE + ++ ++ GDSM D GI + DL+ V Sbjct: 84 VPLLGS-VSAGTGILAEENVETYLP-----DLGGGESFVLRVRGDSMKDAGIYEDDLVYV 137 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT--LDVFGVV 131 + +GDIV+A V+ E T+K + ++LIP NS+Y + +SED +++ GVV Sbjct: 138 EQKALPRNGDIVVALVENEATIKVYENHENVIRLIPRNSSYKVQSFNSEDEHRINIVGVV 197 Query: 132 IHVVKAM 138 H+++ Sbjct: 198 KHLLRRY 204 >UniRef50_A6LM87 LexA repressor n=2 Tax=Thermotogaceae RepID=LEXA_THEM4 Length = 199 Score = 121 bits (304), Expect = 8e-27, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 3/130 (2%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 +E + P+ + G + V++ I++ +I + +K G+SMID I +G Sbjct: 71 QESILIPVKG-KISAGMGIEMFEIVDEEIEIPVRMISGFGNYFALKVEGNSMIDAHIING 129 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVF 128 D +I+ +G I D + T+K+ + V+L+P N +PI ++D + V Sbjct: 130 DYVILKKQYRIPNGQIAAVVFDNKVTLKRFYHKKDKVELVPENKDMNPIVCDAKD-IKVI 188 Query: 129 GVVIHVVKAM 138 G ++ +++ Sbjct: 189 GKLVGIIRFY 198 >UniRef50_C1D2K8 Putative repressor lexA n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2K8_DEIDV Length = 211 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 5/123 (4%) Query: 16 PLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVD 75 PL + + G P A VE I +I Y ++ GDSMI GI D++IV Sbjct: 81 PLVGE-IAAGQPGHAEQNVEAYITRLDQVIDMKEGDYLLRVRGDSMIGVGIYPQDIVIVR 139 Query: 76 SAITASHGDIVIAAVDGE--FTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 T +GDI + + GE T+K++ + L N Y P+T + D + + G ++ Sbjct: 140 PNETVPNGDIAVVLLPGESTATLKRVEHQNSKITLHSANPDYPPMTFPARD-VRIQGCLV 198 Query: 133 HVV 135 + Sbjct: 199 AHI 201 >UniRef50_A3ERI3 LexA repressor n=2 Tax=Leptospirillum sp. Group II RepID=A3ERI3_9BACT Length = 222 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 4/133 (3%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + IV P+ ++ G + + + + + L + ++ GDSM GI D Sbjct: 84 VENIVEIPIVG-RIRAGRLTGSEIVPDGTLAVPLSLFSEKPD-FVLQIRGDSMNGAGILD 141 Query: 69 GDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLD- 126 GD+ + A +GD+++A + GE T+K+L + + L N Y+ I +S +D Sbjct: 142 GDMAFIRKTREARNGDLIVAHIQGEMTLKQLIVEKRQIILRAANPLYADIRVSPDDEAAL 201 Query: 127 VFGVVIHVVKAMR 139 V G +I + + R Sbjct: 202 VQGKMIGLFRDQR 214 >UniRef50_B3XLT2 Transcriptional regulator, XRE family n=9 Tax=Lactobacillales RepID=B3XLT2_LACRE Length = 220 Score = 120 bits (303), Expect = 1e-26, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 5/132 (3%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 E ++ PL + + CG P A + +E ++ + ++ G SM + I DG Sbjct: 91 ERISIPLIGE-IACGDPITADENIEGYVEEIFEKPVPKGNLFALRCKGKSM-EPTIHDGS 148 Query: 71 LLIVDSAITASHGDIVIAAVDG--EFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDV 127 ++ + T G+I VDG E T+K+++ + + L+P N + PI + ++ + Sbjct: 149 IVTIREQPTVEDGEIAAVLVDGDNEATLKRVKHQGNLIMLMPDNKEFDPIILDKDNPGRI 208 Query: 128 FGVVIHVVKAMR 139 G +HV +++ Sbjct: 209 VGKAVHVSWSIK 220 >UniRef50_A7VEX5 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VEX5_9CLOT Length = 147 Score = 120 bits (302), Expect = 1e-26, Method: Composition-based stats. Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 3/117 (2%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 ++ + V G + D + +++++ L+ + ++ VK SGDSM + DGD+ V Sbjct: 23 VYENAVSAGTGNFLEDGPSRTLNIDEALLP-ENTSFGVKISGDSM-EPEFHDGDIAWVVK 80 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 T +G+I I +++G+ +KKL+ + L+ +N Y+PI +S D DVFG V+ Sbjct: 81 QETVENGEIGIFSLNGDAYIKKLREDKEGIFLVSLNKKYAPIRVSENDRFDVFGKVV 137 >UniRef50_B9KYW2 LexA repressor n=2 Tax=Thermomicrobia (class) RepID=B9KYW2_THERP Length = 214 Score = 120 bits (301), Expect = 2e-26, Method: Composition-based stats. Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 11/136 (8%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVE-----QRIDLNQLLIQHPS-ATYFVKASGDSMIDGG 65 +V PL + G P P + +E + ++L L+ HP+ + ++ G SMID Sbjct: 80 VVRVPLVG-TIAAGQPLPVLEPIEVDGAAEYVELGSQLVGHPARDLFALRVKGQSMIDAL 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRPT-VQLIPMNSAYSPITISSE 122 I DGD++++ TA +GD V A + + E T+K+ V+L P N+ PI + Sbjct: 139 IDDGDIVVLRRQATAENGDTVAAWLRREQETTLKRFYREGNLVRLQPANATLQPIYTT-I 197 Query: 123 DTLDVFGVVIHVVKAM 138 D +++ G ++ V++ + Sbjct: 198 DNVEIQGKLLLVIRRL 213 >UniRef50_C6PF89 Transcriptional regulator, XRE family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum DSM 571 RepID=C6PF89_CLOTS Length = 268 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 9/133 (6%) Query: 10 REIVTFPLFSDLVQCGFPSPA-ADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 + + P++++ + G+P+ D + + + A + V +GDSMI+ GI D Sbjct: 136 KPVTYVPVYANKIPAGYPNEVGTDDICDWYVVPSEI----PADFAVNVTGDSMINAGIDD 191 Query: 69 GDLLIVDSAITASHGDIVIAAV-DGEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLD 126 GD++ TA +GDI+IA +GE T+K Q L+P N Y PI ++ Sbjct: 192 GDIVFATINTTADYGDIIIAVSENGEVTIKYFIQKDNQYFLMPANPDYKPIPFTN--DFR 249 Query: 127 VFGVVIHVVKAMR 139 + G+V ++K R Sbjct: 250 IVGIVTGILKEPR 262 >UniRef50_B6W9V1 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis DSM 7454 RepID=B6W9V1_9FIRM Length = 217 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 7/131 (5%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 +++I+ P+ +QCG P + + E + +I ++ + + A GDSMID GI Sbjct: 86 PVKKIIKIPILGH-IQCGKPVMSVENYEGYFTADPEMI---NSDFCLYADGDSMIDAGIH 141 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQ-LRPTVQLIPMNSAYSPITISSED--T 124 +GDL+ +G I +D T+K+ + L P N +YSPI I+ ++ Sbjct: 142 EGDLVFFKQTPQVENGSIAAVFIDDTTTLKRFYKKENQIILQPENKSYSPIIINLDESTN 201 Query: 125 LDVFGVVIHVV 135 + + G ++ + Sbjct: 202 IRILGEMVGMY 212 >UniRef50_C0CQZ2 Putative uncharacterized protein n=3 Tax=Firmicutes RepID=C0CQZ2_9FIRM Length = 227 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 10/124 (8%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ + + CG P + + ++ + A + +KA GDSM++ I DGD++ Sbjct: 102 KLPMLGE-IACGKPIFMDENRDNY----TMIGSNVKADFCLKAKGDSMVNARIMDGDIVF 156 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQLRP---TVQLIPMNSAYSPITISSE--DTLDVF 128 + S +G+I A+D E T+K+ TV LI N Y+P+ + E + + Sbjct: 157 IRSQPEVENGEIAAVAIDDEATLKRFYRDEITQTVTLISENPIYAPMVFTKECQKNVYIL 216 Query: 129 GVVI 132 G + Sbjct: 217 GKAV 220 >UniRef50_C3WA31 Repressor n=6 Tax=Fusobacterium RepID=C3WA31_FUSMR Length = 229 Score = 119 bits (300), Expect = 2e-26, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 5/131 (3%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 PLFS + G + I L I++ + + GDSM + I + Sbjct: 103 NNNTLVPLFS-RISAGIGVITDEEPIDYISLPG--IKNTENVFAINVKGDSM-EPTIKNQ 158 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQ-LIPMNSAYSPITISSEDTLDVF 128 ++I G++ V+GE VK++++ L+ N Y PI + +D V Sbjct: 159 SIIICRQGSELRDGEVGAFLVNGESFVKRIKVTKNFFALLSDNPNYQPIYVYPQDEFKVI 218 Query: 129 GVVIHVVKAMR 139 G V+ V+ +R Sbjct: 219 GKVLKVINDVR 229 >UniRef50_C4Z801 SOS-response transcriptional repressor, LexA n=1 Tax=Eubacterium rectale ATCC 33656 RepID=C4Z801_EUBR3 Length = 213 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 9/138 (6%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 + T P+ V G+ A + V +I+++ + + + GDSMI + Sbjct: 79 VPIESGYTIPVLG-RVAAGYGKEAVEEVIGQIEISPSMAA-KGDYFGLLIKGDSMI-PTL 135 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISSED- 123 DGD +IV+ A GD+VIA V+G + T K+LQ + LIP N Y P+ + + Sbjct: 136 YDGDTVIVERTDDAESGDLVIALVNGSDATCKRLQKYAEGIALIPQNPVYEPMRFTESEI 195 Query: 124 ---TLDVFGVVIHVVKAM 138 + + G V+ + + Sbjct: 196 DTTPVKILGKVVEMRRKF 213 >UniRef50_C8W2C3 Peptidase S24 and S26 domain protein n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8W2C3_DESAS Length = 338 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ ++ G P + ID+ L+ + + +G+SMI GI++GDL++ Sbjct: 163 IPILGS-IRAGIPLLSEQNKIGEIDVPANLVGRVD--FALYVNGNSMIGAGINEGDLVLC 219 Query: 75 DSAITASHGDIVIAAVD-GEFTVKKL-QLRPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 G+IV+A V+ E T+K + V L N Y I + D + G V+ Sbjct: 220 KQDYNPYPGEIVVALVNTDETTLKYYIKENDKVLLRAANPKYKDIELGPGD--QIQGNVV 277 Query: 133 HVVKA 137 ++K Sbjct: 278 KILKE 282 >UniRef50_C6J0H6 LexA repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J0H6_9BACL Length = 232 Score = 119 bits (299), Expect = 3e-26, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 5/136 (3%) Query: 2 LFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSM 61 L A+ E PL G +++ + + + +I+ + ++ GDSM Sbjct: 88 LEETSAEHVEETLVPLVGKT-AAGIEKTYYEFIRGYVPIPKEVIK--GTCFVLEVDGDSM 144 Query: 62 IDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITIS 120 GI GD +++ +GDI + ++ E T+K++Q + L+ N AY + Sbjct: 145 NGDGIEHGDFVVIKQQPVVENGDIALLRIEDEITLKRIQREGGKIILVSSNPAYPKRAVP 204 Query: 121 SEDTLDVFGVVIHVVK 136 + V G I+ ++ Sbjct: 205 ER-NVQVVGKYIYKIR 219 >UniRef50_Q48J39 Peptidase, S24 family n=3 Tax=Pseudomonas syringae group RepID=Q48J39_PSE14 Length = 240 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 15/142 (10%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAA----DYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 A + +P+ S V G S A D R D++ + P+ ++++ GDSM Sbjct: 103 AQPERMYRYPVVS-WVTAGTWSEAVQPFPDGFSDRYDVSDYKAKGPA--FWLEVKGDSMT 159 Query: 63 D---GGISDGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRPTVQ-LIPMNSAYSP 116 I +G ++VD+ G +VIA + E T KKL V+ L P+N AY Sbjct: 160 STSAPSIPEGSQILVDTEADVRPGKLVIAKLADSNEATFKKLVEDGGVRYLKPLNPAYP- 218 Query: 117 ITISSEDTLDVFGVVIHVVKAM 138 T+ D + GVV+ + Sbjct: 219 -TVQCSDDCKIIGVVVRSLTKF 239 >UniRef50_UPI0001BC4599 putative prophage repressor n=1 Tax=Fusobacterium sp. D12 RepID=UPI0001BC4599 Length = 198 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 7/130 (5%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 E + P+ S V G + + + + + L + G+SM + +G Sbjct: 70 TEDIKIPIVS-KVSAGTGLLVEENIVDYLPIPKELSNKCD--FATFVEGNSMF-PDVKNG 125 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP---TVQLIPMNSAYSPITISSEDTLD 126 D+ +V G+IVI +++G +KK P + I N Y I++ D L Sbjct: 126 DIALVKMDCEIESGNIVIFSLNGNSYIKKYHYNPFSNKITFISSNKEYENISVMEGDELK 185 Query: 127 VFGVVIHVVK 136 V G VI + Sbjct: 186 VIGRVIGTLN 195 >UniRef50_UPI00016A4599 putative transcriptional regulator n=1 Tax=Burkholderia oklahomensis EO147 RepID=UPI00016A4599 Length = 230 Score = 118 bits (298), Expect = 4e-26, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 15/149 (10%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRI-------DLNQLLIQHPSATYFVKA 56 A E V P + G D + + + L +P ++ Sbjct: 83 EANAASSEFVYVPRYDVKASAGTGFWLGDEAKAKFTMAFRRHWVEHYLHANPKDLSVLRV 142 Query: 57 SGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP--TVQLIPMNSAY 114 GDSM + +GD ++++ A T+ I + +DG+ VK+LQ TV++I N Y Sbjct: 143 HGDSMY-PVLHEGDNILINHAQTSPQDGIYVLRLDGQMLVKRLQWVGAATVRVISANPDY 201 Query: 115 SPITI---SSED--TLDVFGVVIHVVKAM 138 P + S ED + G V+ + + Sbjct: 202 PPYEVALSSPEDQREFCIVGRVVWYGRQL 230 >UniRef50_C3AV55 Transcriptional regulator, XRE n=2 Tax=Bacillus cereus group RepID=C3AV55_BACMY Length = 209 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 10/145 (6%) Query: 1 MLFIKPADLREI----VTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKA 56 + KP++L E V P+ + CG P A + E ++ Y+++A Sbjct: 68 LTEEKPSNLYEASIRPVKVPILG-KIACGLPIYAEENFEGFRYETSDILPR-GEVYYLEA 125 Query: 57 SGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLRPT-VQLIPMNSA 113 G+SM + I +G +++ +G+I ++G E T+K+++ + V L+P NS+ Sbjct: 126 KGNSM-EPTIPNGSFVLIRKQDDVENGEIAAVLINGDTEATLKRVKKQGDVVILMPDNSS 184 Query: 114 YSPITISSEDTLDVFGVVIHVVKAM 138 Y PI ++S + G I + + Sbjct: 185 YEPIVLTSNVPARIIGKAIRFTRDL 209 >UniRef50_C6SPU6 Putative transcriptional regulator n=2 Tax=Streptococcus mutans RepID=C6SPU6_STRMN Length = 297 Score = 118 bits (297), Expect = 5e-26, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 6/124 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 R+ ++ + V G ++ I + I P + +G+SM + +G Sbjct: 178 RQYENIQIYGE-VSAGTGIWVGHEKQETI---KYPIPIPEHDIALIVNGNSM-EPLFYNG 232 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVF 128 D++ V HG I++ V+ E VKKL + ++LI +N Y I + +DT++V Sbjct: 233 DVIFVKKTKAIHHGQIIVVIVNNEAYVKKLYRKNKEIRLISLNPDYDDIILKEDDTIEVI 292 Query: 129 GVVI 132 G VI Sbjct: 293 GTVI 296 >UniRef50_A6CDG4 LexA repressor n=2 Tax=Planctomyces maris DSM 8797 RepID=A6CDG4_9PLAN Length = 202 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 18/138 (13%) Query: 5 KPADLREIVTFPLFSDLVQCGFPS--PAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 KPA++ FS +Q G P PAAD + ++D + L + + +K G+SMI Sbjct: 78 KPANVT-------FSGSLQAGTPIIPPAAD--DSQVDFSALFESGDN--FCLKVKGNSMI 126 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITIS 120 + I +GD ++V T G+IV+A VD E T+K+ V+L P NS SPI Sbjct: 127 EAQIQEGDFVVVKKQDTCQQGEIVVALVDNQEATLKRFYQEADRVRLEPANSTMSPIY-- 184 Query: 121 SEDTLDVFGVVIHVVKAM 138 + V GVV V++ Sbjct: 185 -STDVQVLGVVKGVIRKF 201 >UniRef50_C5NYT5 Putative prophage LambdaCh01, repressor protein n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NYT5_9BACL Length = 210 Score = 118 bits (296), Expect = 6e-26, Method: Composition-based stats. Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 12/135 (8%) Query: 8 DLREIV-TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 D + V P+ + G + ++ I ++Q + A + ++ GDSMI+ GI Sbjct: 84 DFSDDVSKLPILG-TICAGDGVYIEEEYDEHIFIDQGM----RADFALRVKGDSMIEAGI 138 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG--EFTVKK-LQLRPTVQLIPMNSAYSPITISSED 123 DGDL+ + + +G I + E ++KK V L P N Y PI Sbjct: 139 FDGDLVFIRQQSSVRNGKIAAVRLTDWNEASLKKIFVKNDNVILYPCNPDYEPIVTR--- 195 Query: 124 TLDVFGVVIHVVKAM 138 +++ G + V + + Sbjct: 196 NVEIIGECVGVYREL 210 >UniRef50_C1D938 Transcriptional regulator n=3 Tax=Neisseriaceae RepID=C1D938_LARHH Length = 262 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 12/145 (8%) Query: 5 KPADLREIVTFPLFSDLVQCGFPS------PAADYVEQRIDLNQLLIQHPSATYFVKASG 58 P +L++ V P ++ G P +R ++ L P + G Sbjct: 119 NPVNLQDFVFIPRYNLKASAGHGLDANGEKPIFSMAFRRYWIDNFLRIDPHDLSVLSVKG 178 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNSAYSP 116 DSM ++D D+++++ A A + + +DG+ VK+LQ +P + +I N AY+P Sbjct: 179 DSMEGV-LNDRDVILINHADNAPKDGLYVLRIDGDLVVKRLQRKPGGKIGIISANEAYAP 237 Query: 117 ITISSED---TLDVFGVVIHVVKAM 138 I D + G V+ + + Sbjct: 238 YDIDLNDLPNDFAIVGRVVWFGRQL 262 >UniRef50_A7I013 Putative uncharacterized protein n=1 Tax=Campylobacter hominis ATCC BAA-381 RepID=A7I013_CAMHC Length = 233 Score = 118 bits (296), Expect = 7e-26, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 12/145 (8%) Query: 4 IKPADLR---EIVTFPLFSD-LVQCGFPSPAADYVEQRIDLNQLLIQHPSATY------F 53 + P +L+ + + P F D G + + I+ ++ ++ T Sbjct: 91 VTPPNLKMSQDNFSVPYFDDVYASAGGGYINDENPPKMIEFSKSFLRDYLGTVEFSRLNI 150 Query: 54 VKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSA 113 +K+ GDSM + I LL + G I +A +D E VK+LQ RP V+LI N Sbjct: 151 IKSKGDSM-EPTIPKNALLFIRLG-DVEEGQICVARIDDELYVKRLQKRPVVKLISDNPD 208 Query: 114 YSPITISSEDTLDVFGVVIHVVKAM 138 Y PIT+ ++ ++ G VI +K Sbjct: 209 YDPITLQPDENFEIIGCVIGYIKKF 233 >UniRef50_P69202 Repressor protein C2 n=23 Tax=root RepID=RPC2_BPP22 Length = 216 Score = 117 bits (295), Expect = 1e-25, Method: Composition-based stats. Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 11/127 (8%) Query: 14 TFPLFSDLVQCGFPSPAAD-YVEQRID-LNQLLIQHPSATYFVKASGDSMIDG---GISD 68 ++PL S V G A + Y ++ I+ + + ++++ GDSM I + Sbjct: 85 SYPLIS-WVSAGQWMEAVEPYHKRAIENWHDTTVDCSEDSFWLDVQGDSMTAPAGLSIPE 143 Query: 69 GDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTL 125 G +++VD + +G +V+A ++G E T KKL + L P+N Y I I+ Sbjct: 144 GMIILVDPEVEPRNGKLVVAKLEGENEATFKKLVMDAGRKFLKPLNPQYPMIEING--NC 201 Query: 126 DVFGVVI 132 + GVV+ Sbjct: 202 KIIGVVV 208 >UniRef50_A7VTE0 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTE0_9CLOT Length = 222 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 9/124 (7%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P+ + G P A + + ++ + + +K G SM + ISDGD++IV Sbjct: 96 IPVIG-TIPAGTPVEAIEDILDYEEITPQMASQGEH-FALKIKGQSM-EPKISDGDVVIV 152 Query: 75 DSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPMNSAYSPITISSED----TLDVF 128 +G+I + V+G E TVK+++ P + LIP N AY P+ S+ + + + Sbjct: 153 RKQDDCENGEIAVVLVNGDEATVKRIKKGPEGLMLIPNNPAYEPMFYSNAEIESLPVSII 212 Query: 129 GVVI 132 G V+ Sbjct: 213 GKVV 216 >UniRef50_D0DME8 LexA repressor n=1 Tax=Lactobacillus jensenii SJ-7A-US RepID=D0DME8_9LACO Length = 208 Score = 117 bits (293), Expect = 1e-25, Method: Composition-based stats. Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 7/126 (5%) Query: 12 IVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDL 71 ++ P+ + + CG P A +E +N S +F+KA GDSM+ I + Sbjct: 82 MIKVPVLGE-IACGQPILAEPNIEGYRYIN--CRDQSSNLFFLKAKGDSMV-PTIPENSY 137 Query: 72 LIVDSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDT--LDVF 128 +++D + DIV +D T+K+ V L N + PI ++S + + Sbjct: 138 VLIDRDESVEDNDIVAVLIDNSATLKRYHKNGNTVTLTGDNPNFPPIVLTSTEDAIAQIL 197 Query: 129 GVVIHV 134 G I V Sbjct: 198 GKAIQV 203 >UniRef50_A5FPB3 LexA repressor n=5 Tax=Dehalococcoides RepID=A5FPB3_DEHSB Length = 214 Score = 117 bits (293), Expect = 2e-25, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 12/136 (8%) Query: 13 VTFPLFSDLVQCGFPSPAADY-------VEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 ++ P+ + G P P + ++ I++ + L + Y ++ G SMI+ Sbjct: 80 ISIPVIGQ-IAAGTPIPVPESDSFAVVTSDESIEVTEDLTRGRENIYALRVKGVSMIEDL 138 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLR-PTVQLIPMNSAYSPITISSE 122 I+DGDL+I+ T +G+ + E T+K++ + V+L P N PI Sbjct: 139 INDGDLVIMQHTQTVDNGETAAVWLKDQKEVTLKRIYMEPGRVRLQPANRTMPPIYTKP- 197 Query: 123 DTLDVFGVVIHVVKAM 138 D +++ G VI V++ + Sbjct: 198 DNVEIQGRVIAVIRQL 213 >UniRef50_A1HR30 Putative prophage repressor n=2 Tax=Firmicutes RepID=A1HR30_9FIRM Length = 215 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 8/139 (5%) Query: 6 PADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG 65 PADL V P+ V+ G A + +++ + + ++ GDSMI G Sbjct: 79 PADLSNFVPIPIVG-TVKAGPNGLAYEEHLGYEYVDKKDVNGAKHIF-LQVKGDSMIGEG 136 Query: 66 ISDGDLLIVDSAITASHGDIVIAAVDG---EFTVKKLQLRP-TVQLIPMNSAYSPITISS 121 I GDL +V GD+ + VD E +K++ + ++ L N +Y P + Sbjct: 137 ILPGDLALVKEQPEVYSGDLAVVIVDDIEPEGRIKRVHFKGDSIVLQSANPSYPPEIFTG 196 Query: 122 EDT--LDVFGVVIHVVKAM 138 E+ + + G V ++ Sbjct: 197 EERKKIRIVGKVKQTIRKY 215 >UniRef50_B8I150 Transcriptional regulator, XRE family n=1 Tax=Clostridium cellulolyticum H10 RepID=B8I150_CLOCE Length = 281 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 64/133 (48%), Gaps = 7/133 (5%) Query: 11 EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGD 70 + + P+ ++ G P+ A + E ++ I ++++ GDSM D +G Sbjct: 151 DFIPVPVLGL-IRAGQPAFAEENNEGYYPTDRQFISDDHEYFYLRIKGDSM-DKEFKEGS 208 Query: 71 LLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRPT-VQLIPM--NSAYSPITISS-EDTL 125 L++V T G+I + ++G + TVKK+ +R + L+P N + P T + ++ + Sbjct: 209 LVLVQIQSTLESGEIGVVLINGFDATVKKVFIRDNLITLMPQSNNEDHQPQTYDTVKEEI 268 Query: 126 DVFGVVIHVVKAM 138 + G V+ VK Sbjct: 269 KILGKVVLAVKKY 281 >UniRef50_Q5WE12 SOS-response transcriptional repressor n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WE12_BACSK Length = 209 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 5/133 (3%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 +++ +V P+ V+ G+ A + V + I +++ GDSMID G++ Sbjct: 79 NMQSLVKIPILG-TVRAGYNLLADENVIGYAYAPKSDIGD-GDYFYLNIEGDSMIDAGLN 136 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTL 125 GD ++V S G I + ++G E TVK++ V L P N P ED + Sbjct: 137 SGDRILVRKQNHTSDGSIAVVLINGEEATVKRVFFDSNKVILSPENPHMRP-QFYDEDEI 195 Query: 126 DVFGVVIHVVKAM 138 + G V+ + Sbjct: 196 RILGKVVSASRTY 208 >UniRef50_C1D6P9 Transcriptional regulator n=2 Tax=Betaproteobacteria RepID=C1D6P9_LARHH Length = 242 Score = 116 bits (292), Expect = 2e-25, Method: Composition-based stats. Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADY------VEQRIDLNQLLIQHPSATYFVKASG 58 P DL E V P +S G D +R + L +P + G Sbjct: 99 NPVDLEEFVFIPRYSVRAAAGCGQWPEDESPRFSMAFRRYWVENYLRANPDELSVIAVDG 158 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI--PMNSAYSP 116 DSM ++D D+++V+ A G I + +DG VK++Q P L N AY P Sbjct: 159 DSMEGV-LNDRDVILVNHADRDPRGSIYVLRIDGHLVVKQVQRLPGGILEVSSSNPAYKP 217 Query: 117 ITISS---EDTLDVFGVVIHVVKAM 138 T+ D DV G V+ + + Sbjct: 218 FTVELGKVGDDFDVIGRVVWFGRQV 242 >UniRef50_B1R9D2 LexA repressor n=3 Tax=Clostridium perfringens RepID=B1R9D2_CLOPE Length = 354 Score = 116 bits (291), Expect = 2e-25, Method: Composition-based stats. Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 8/141 (5%) Query: 3 FIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMI 62 + K D + I + V G PS A + VE+ + L Q + + +GDSM Sbjct: 213 YKKNKDYKNITCINKYGS-VAAGIPSFACEDVEKLLYLPQKYFSPAYDYFALTINGDSM- 270 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQL---RPTVQLIPM--NSAYSPI 117 + DG+++IV A +GDI+IA + GE T K+ +LIP N Y P Sbjct: 271 NKLYEDGEIIIVRKQNYARNGDIIIACILGEATCKEYYFNKDDDKNELIPHSTNPKYKPQ 330 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 + S D + + G+V + + Sbjct: 331 SYS-NDEIIILGIVECSLNKI 350 >UniRef50_C5UY93 LexA repressor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UY93_CLOBO Length = 248 Score = 116 bits (291), Expect = 3e-25, Method: Composition-based stats. Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 8/144 (5%) Query: 1 MLFIKPADLR-EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGD 59 + I DL +T P+ ++ G P A D ++ I +++ ++ S + +K GD Sbjct: 107 LKEINNMDLNYSFITIPIVGS-IRAGHPIWAEDNLQGYIPVSKNSLKTDSIYFGLKVKGD 165 Query: 60 SMIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRPT-VQLIPM--NSAY- 114 SM + +G +LIV+ +G+I + ++G E TVKK+ L + LIPM N + Sbjct: 166 SM-NLEFDEGTILIVEKTPCIENGEIGVIRINGFEATVKKVVLNDDMITLIPMSNNPEHI 224 Query: 115 SPITISSEDTLDVFGVVIHVVKAM 138 + D +++ G V +K Sbjct: 225 PNMYNLKTDDIEIIGKVKQAIKTY 248 >UniRef50_Q3ABG7 Putative prophage LambdaCh01, repressor protein n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3ABG7_CARHZ Length = 254 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 17/135 (12%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISD 68 ++ T PL ++ G P A + + I L + A + ++ G+SMI GI Sbjct: 72 IQNTKTIPLLG-TIRAGIPLLAEENWIEEIALPAGI----KADFALQVEGESMIYAGIFP 126 Query: 69 GDLLIVDSAITASHGDIVIAAVDGE-------FTVKKLQLRPTVQLIPMNSAYSPITISS 121 GD+ + TA++G IV A V E F VK L N Y I I+ Sbjct: 127 GDIAFFKQSETATNGQIVAAGVVEETWKANLKFYVK---TNGKAFLRSANPKYKDIEITP 183 Query: 122 EDTLDVFGVVIHVVK 136 + + G++ +V+ Sbjct: 184 QH--KIIGIMTGLVR 196 >UniRef50_B8GLK4 Putative phage repressor n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GLK4_THISH Length = 230 Score = 115 bits (290), Expect = 3e-25, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 16/143 (11%) Query: 10 REIVTFPLFSDLVQCGFPSPAADY------VEQRIDLNQLLIQHPSATYFVKASGDSMID 63 E PL+ G + + +R ++Q L +P+ Y + G+SM + Sbjct: 90 EEYALVPLYDVRAAAGHGAVVEEEQVTDSLAFKRQWIHQELHANPADLYLIYVDGESM-E 148 Query: 64 GGISDGDLLIVDS---AITASHGDIVIAAVDGEFTVKKLQLRPT--VQLIPMNSAYSPIT 118 + GD+++VD G I + +DG VK+LQ P V++ N AY P Sbjct: 149 PTLRPGDVILVDRRSAQAVPRDG-IYVLRMDGSLLVKRLQRLPGRKVKVTSDNPAYEPFE 207 Query: 119 I---SSEDTLDVFGVVIHVVKAM 138 + + + L + G V+ + M Sbjct: 208 LALDTPGEDLAIIGRVVWSGRRM 230 >UniRef50_UPI0001744342 SOS-response transcriptional repressor, LexA n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744342 Length = 202 Score = 115 bits (289), Expect = 4e-25, Method: Composition-based stats. Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 7/133 (5%) Query: 9 LREIVTFPLFSDLVQCGFPSPAADYVEQ--RIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 RE V P+F + GF + ++ + +DL + + S + +K GDSM I Sbjct: 71 ERETVDIPIFGL-IPAGFTADNPEHSDGNLTLDLRTMGLSPRSKPFALKVRGDSMTGAHI 129 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSEDTL 125 GD +I++ DIV A +DGE T+K+ L L N +Y + L Sbjct: 130 IQGDYVILE-QRDPRPKDIVAALMDGETTLKRYLVDNGQPFLRAENPSYPDLI--PAREL 186 Query: 126 DVFGVVIHVVKAM 138 + GV++ + + Sbjct: 187 MIQGVMVGLFRPY 199 >UniRef50_B9E7T2 Putative uncharacterized protein n=1 Tax=Macrococcus caseolyticus JCSC5402 RepID=B9E7T2_MACCJ Length = 209 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 7 ADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGI 66 +++ +++ P+ S V G P A + + +++ L+++ + + SGDSM D Sbjct: 76 SNILPVISIPVLS-KVSAGLPIYAEQNIVDQTFISKTLVKNGKEYFGLIVSGDSM-DKEF 133 Query: 67 SDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKL-QLRPTVQLIPM--NSAYSPITISSE 122 DGD++IV+ +G I + ++G TVK++ R T+ L+P N + P + Sbjct: 134 KDGDIVIVEYNSCIENGQIGVVQINGYNATVKRVRYNRDTIILLPESNNQKHQPQFYNKN 193 Query: 123 DTLDVFGVVIHVVKAM 138 D + G V+ + + Sbjct: 194 DEIVFVGRVVGMNRNY 209 >UniRef50_Q1QXW7 Putative prophage repressor n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QXW7_CHRSD Length = 145 Score = 115 bits (288), Expect = 6e-25, Method: Composition-based stats. Identities = 40/117 (34%), Positives = 69/117 (58%), Gaps = 2/117 (1%) Query: 23 QCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASH 82 GFPSPA DY E +DL++ L++ P++T+F+ GD+ G+ GDLL++D AI+ Sbjct: 24 ASGFPSPADDYREAPLDLHRHLVRRPASTFFMHLEGDAHRHAGLHHGDLLVIDRAISPRP 83 Query: 83 GDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 G ++A +DGE +V +L+ R + L P + + D ++GV+ +V+ A+ Sbjct: 84 GHWLVAVIDGELSVLRLERRQSRLYLAPSQPRLAALPFDP-DDARLWGVICYVIHAL 139 >UniRef50_D0RPK4 Protein MucA n=1 Tax=alpha proteobacterium HIMB114 RepID=D0RPK4_9RICK Length = 134 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 42/129 (32%), Positives = 71/129 (55%), Gaps = 4/129 (3%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 P+ V GFPSPA DY+E I+LN+ LI + ++T+ ++ SG SM++ I DGD+LI Sbjct: 6 KLPIILQKVCAGFPSPATDYLEDEINLNEELISNKASTFLIRVSGYSMVEDHIYDGDVLI 65 Query: 74 VDSAITASHGDIVIAAVDGEF-TVKKLQLRPTVQLIP--MNSAYSPITISSEDTLDVFGV 130 VD ++ H + + G+ K ++ LI N + I I+ ++ V+GV Sbjct: 66 VDKSLNVKHNSVAVLNYQGQLVVKKIVKKNNKFFLISKLGNHNH-FIEITEDNETQVWGV 124 Query: 131 VIHVVKAMR 139 V +V+ ++ Sbjct: 125 VTYVIHKVK 133 >UniRef50_C0DVP2 Putative uncharacterized protein n=2 Tax=Eikenella corrodens ATCC 23834 RepID=C0DVP2_EIKCO Length = 279 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 14/147 (9%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVEQ-RIDLNQLLI-----QHPSATYFVKASG 58 +P D+ E V PL+ + G + A D + + + + + V G Sbjct: 134 RPVDIDEFVFIPLYDVALSAGHGAWADDIPPKSTLAFRRDWLEAFVTTDFNNLSVVMVKG 193 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI-PMNSAYSPI 117 DSM ++D D ++VD + T + + + E VK++Q P L+ N Y P Sbjct: 194 DSMAGV-LNDKDAILVDHSRTEASDGLYALRIGNEIFVKRVQRLPHALLVTSENPQYKPF 252 Query: 118 TI------SSEDTLDVFGVVIHVVKAM 138 + +S+ ++ + G V+ + +A+ Sbjct: 253 EVPLQNGDNSDSSVSIIGKVVWLGRAL 279 >UniRef50_UPI0001BC5823 SOS-response transcriptional repressors n=1 Tax=Fusobacterium sp. 3_1_5R RepID=UPI0001BC5823 Length = 208 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 9/129 (6%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 ++ P+ S V G D + I+ ++ + P+ + SGDSM + I D Sbjct: 78 ENMIKIPVVSV-VSAGNGKCGLDDITDWIEFSENIF--PACDFATTVSGDSM-EPKIFDS 133 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR---PTVQLIPMNSAYSPITISSE--DT 124 D+L++ T GDI I +D + KKLQL V L +N Y+P +S E + Sbjct: 134 DILLIRKTETLDSGDIGIFKIDEDVFCKKLQLNHLTNEVILKSLNPCYAPRYLSKEELEN 193 Query: 125 LDVFGVVIH 133 + G V+ Sbjct: 194 FKIIGKVVG 202 >UniRef50_A6GWN0 SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC n=1 Tax=Flavobacterium psychrophilum JIP02/86 RepID=A6GWN0_FLAPJ Length = 148 Score = 114 bits (287), Expect = 7e-25, Method: Composition-based stats. Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 3/118 (2%) Query: 22 VQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITAS 81 VQ GFPSPA D+VEQ++ L++ I +P+ TY +K G+SM + GD+LIV S + Sbjct: 33 VQAGFPSPAEDFVEQKLSLDEKYISNPNNTYLIKVRGNSMY-PTLQIGDILIVKSDLDLK 91 Query: 82 HGDIVIAAVDG-EFTVKKLQLRPTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAM 138 I I +++ ++TVK+ R + NS Y I I ED++ GVV ++++ + Sbjct: 92 DNKIAIVSINNSDYTVKRYSKRKKTF-VADNSEYPNIDIEEEDSILCLGVVKNLIRDL 148 >UniRef50_Q4ZB06 ORF022 n=15 Tax=root RepID=Q4ZB06_9CAUD Length = 209 Score = 114 bits (286), Expect = 9e-25, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 59/135 (43%), Gaps = 6/135 (4%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D + P+ S + G P + + I + + + ++ SGDSM + Sbjct: 77 DTLPVKKIPVVS-KISAGMPIYTEENLVDYIYFSTKNLNPDKEEFGLQVSGDSMNEL-FD 134 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRP-TVQLIPM--NSAYSPITISSED 123 +GD+++V+ +G + + ++G TVK+++ + LIP N + P +D Sbjct: 135 EGDVVVVEKDSIVENGQLGVVMINGYNGTVKRIRYNGDQIILIPESNNPNHYPQVYGKDD 194 Query: 124 TLDVFGVVIHVVKAM 138 + + G V+ VK Sbjct: 195 EVKIVGRVVASVKTY 209 >UniRef50_B7CAT6 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAT6_9FIRM Length = 196 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 9/136 (6%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D + + P+ V+ G+ + +E I+LN+ YF++ GDSMI+ I Sbjct: 64 DEEDRIK-PIVGS-VKAGYDGFPMEDIEGYIELNRH--DGKKGDYFLRVRGDSMINAHIY 119 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKK-LQLRPTVQLIPMNSAYSPITISSED--- 123 +GDL+ V G I I V E T+K+ L + + L N + E+ Sbjct: 120 EGDLVFVKQTNEVESGSIAIVLVGEEATLKRVLYKKGLMILEAANPKIDTKVFTPEEVEE 179 Query: 124 -TLDVFGVVIHVVKAM 138 + V G V++ + Sbjct: 180 LPVKVIGKVLYARRDF 195 >UniRef50_C4VM34 SOS-response transcriptional repressor n=3 Tax=Lactobacillus jensenii RepID=C4VM34_9LACO Length = 225 Score = 114 bits (286), Expect = 1e-24, Method: Composition-based stats. Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 11/126 (8%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMIDGGISDGDLLI 73 P+ + CG P A +E + L + ATYF +K G SM + I DG + I Sbjct: 103 IPILG-TIACGEPILAEQNIEDYVSL----VPSDDATYFGLKCRGHSM-EPTIHDGAIAI 156 Query: 74 VDSAITASHGDIVIAAVD---GEFTVKKLQ-LRPTVQLIPMNSAYSPITISSEDTLDVFG 129 + T G+I V E T+K+++ + + L+P N + PI + +D + + G Sbjct: 157 IRQQPTVEDGEIAAVLVGEDANEATLKRVRHVNNAILLVPDNENFEPILGTKKDPIRIVG 216 Query: 130 VVIHVV 135 + V+ Sbjct: 217 KAVRVL 222 >UniRef50_B8R672 Ci-like repressor n=1 Tax=Lactobacillus phage Lv-1 RepID=B8R672_9CAUD Length = 219 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 12/137 (8%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYF-VKASGDSMI 62 I P E P+ + CG P A +E + L + ATYF +K G SM Sbjct: 87 ISPVAKAEH-QIPVIG-TIACGEPILAEQNIEDYVSL----VPSDDATYFGLKCRGHSM- 139 Query: 63 DGGISDGDLLIVDSAITASHGDIVIAAVD---GEFTVKKLQ-LRPTVQLIPMNSAYSPIT 118 + I DG + I+ T G+I V E T+K+++ + + L+P N + PI Sbjct: 140 EPTIHDGAIAIIRQQPTVEDGEIAAVLVGEDANEATLKRVRHVNNAILLVPDNENFEPIL 199 Query: 119 ISSEDTLDVFGVVIHVV 135 + +D + + G + V+ Sbjct: 200 GTKKDPIRIVGKAVRVL 216 >UniRef50_B3GVX0 Putative uncharacterized protein n=1 Tax=Streptococcus phage PH15 RepID=B3GVX0_9CAUD Length = 249 Score = 113 bits (285), Expect = 1e-24, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 58/131 (44%), Gaps = 6/131 (4%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D+ ++ ++ + G D +RI+L + A + + GDSM + Sbjct: 123 DIIQLYSYDYYDHPASAGTGQYLNDVRVERIELP----VNIDADFVIPIKGDSM-EPDYH 177 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR-PTVQLIPMNSAYSPITISSEDTLD 126 DGDL+ + +++ + G I + + + +K+L + L +N AY + I+ E Sbjct: 178 DGDLVFIQTSVELNDGVIGVFNYNNDAYIKQLVIDKDQAYLHSLNPAYKDMPITPETDFR 237 Query: 127 VFGVVIHVVKA 137 + G V+ + + Sbjct: 238 IIGEVVDIYRE 248 >UniRef50_A5ZWS0 Putative uncharacterized protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZWS0_9FIRM Length = 236 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 17 LFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIVDS 76 L+ V G I++ + SA + V+ GDSM + DG ++ + Sbjct: 122 LYDLPVSAGTGQFLDSDRFSEIEVGDEVSS--SADFGVRVCGDSM-EPLYLDGQIIWIHK 178 Query: 77 AITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDTLDVFGVVIH 133 T G+I + +DG+ VKK +QLI +N Y+PI ++S TL FG V+ Sbjct: 179 QETLEEGEIGVFFLDGDAYVKKYHQSDSGIQLISLNKKYAPIQVTSGSTLKTFGKVVG 236 >UniRef50_A0JQA7 CI-like repressor, phage associated n=1 Tax=Lactobacillus salivarius UCC118 RepID=A0JQA7_LACS1 Length = 258 Score = 113 bits (284), Expect = 2e-24, Method: Composition-based stats. Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 10/135 (7%) Query: 4 IKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMID 63 I P + + + V G D + + +N P+ + ++ +GDSM Sbjct: 127 IHPINENDNTYYVDVLGSVSAGTGEWLTDEQHEEVMVNNE---PPAHDFALRVNGDSMTP 183 Query: 64 GGISDGDLLIVDS---AITASHGDIVIAAVDGEFTVKKLQLRPT---VQLIPMNSAYSPI 117 SDG ++ V+ + VIA ++G+ VKK+ +LI +N Y+ I Sbjct: 184 I-FSDGQIIYVNKIYDTEEVRNNQFVIAELNGDSYVKKIVFDDNRKNCRLISLNKKYADI 242 Query: 118 TISSEDTLDVFGVVI 132 I D + GVVI Sbjct: 243 EIKKSDDFKIVGVVI 257 >UniRef50_Q3ZL55 Transcriptional regulator n=1 Tax=Escherichia blattae RepID=Q3ZL55_ESCBL Length = 246 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 12/143 (8%) Query: 5 KPADLREIVTFPLFSDLVQCGFPSPAADYVE------QRIDLNQLLIQHPSATYFVKASG 58 DL E V P ++ G+ S D +R + L P+ + G Sbjct: 103 NNVDLEEFVFVPRYNVCASAGYGSWNDDETPMFTVSFRRFWVTNHLKADPAQLSVISVYG 162 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLI--PMNSAYSP 116 DSM ++D D+++++ A I + +DG+ VK++Q P L N AY P Sbjct: 163 DSMEGV-LNDKDIILINHADKEPREGIYVLRIDGQLIVKRVQRLPGSLLRITSTNPAYEP 221 Query: 117 ITISSED---TLDVFGVVIHVVK 136 +I+ D D+ G V+ + Sbjct: 222 FSINLNDVPSDFDIVGKVVWYGR 244 >UniRef50_B7ISP5 LexA repressor n=15 Tax=Bacillus cereus group RepID=B7ISP5_BACC2 Length = 239 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 7/136 (5%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 D I+ P+ V G P A + +E + + + +++ G SM + Sbjct: 106 DQSNIIHIPIIGS-VAAGTPIFAEENIEGYLPMLSTFLNKRKKYFYLTVKGTSM-NLEFP 163 Query: 68 DGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQLRPTVQ-LIPM--NSAYSPITISSE- 122 DG ++V+ +G I + V+G + TVKK+ ++ LIP+ + + P T Sbjct: 164 DGSYVLVEETPYVENGQIAVVKVNGYDATVKKISKSGSIITLIPLSNDPIHEPKTYDLSA 223 Query: 123 DTLDVFGVVIHVVKAM 138 + + + G V+ VK Sbjct: 224 EDVKIIGRVVQAVKNY 239 >UniRef50_C3XGR1 Putative uncharacterized protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XGR1_9HELI Length = 243 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%) Query: 6 PADLREIVTFPLFSD-LVQCGFPSPAADYVEQRIDLNQLLIQHPS------ATYFVKASG 58 P V P++ + G +++ Q I+L++ ++ + A G Sbjct: 106 PTQSNNSVRIPVYDEVYASAGQGFINDEHITQHIELDKGFLRSYFGLTSFLDLSIITARG 165 Query: 59 DSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRPTVQLIPMNSAYSPIT 118 DSM+ + + +IV T G I + +D E VK+LQ RP +LI N +Y I Sbjct: 166 DSMLPA-VPENCQIIVQKG-TPREGQICVTRIDDELYVKRLQKRPKYKLISDNKSYDDIE 223 Query: 119 ISSEDTLDVFGVVIHVVKAM 138 + + ++ G+V+ + + + Sbjct: 224 L-EGENYEILGIVVGLFQKI 242 >UniRef50_B9WXS5 Putative phage repressor n=1 Tax=Streptococcus suis 89/1591 RepID=B9WXS5_STRSU Length = 251 Score = 113 bits (283), Expect = 2e-24, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 6/125 (4%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T+ + G D + I+L + A + V GDSM + GD + Sbjct: 131 TYNYYDQPASAGTGQYLNDVKVETIELPIEV----DADFVVPIYGDSM-EPEYHSGDYVF 185 Query: 74 VDSAITASHGDIVIAAVDGEFTVKKLQL-RPTVQLIPMNSAYSPITISSEDTLDVFGVVI 132 V ++ S GDI + A +GE +K+L++ L +N Y I I+++ G V+ Sbjct: 186 VKLSVDLSDGDIGVFAYNGEAYIKQLRITDQGAYLHSLNPDYDNIPITADTDFRTIGEVV 245 Query: 133 HVVKA 137 V + Sbjct: 246 EVYRE 250 >UniRef50_C7H9N9 LexA repressor n=2 Tax=Faecalibacterium prausnitzii RepID=C7H9N9_9FIRM Length = 206 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 10/133 (7%) Query: 8 DLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGIS 67 L E+V PL + CG P A +E I + A + + G SM I Sbjct: 78 PLPEMVRVPLVGS-IACGSPITAEQNIECYIGVPAAW----HADFALTCHGSSMA-PTIC 131 Query: 68 DGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPMNSAYSPITISSE---D 123 DGD++ + G+I + E T+K + TV L+ N+A P I + + Sbjct: 132 DGDIVCIRCQPEVEQGEIAAVRIGDEATLKHFHRQGDTVMLLADNAAVCPPMIYAGPQLN 191 Query: 124 TLDVFGVVIHVVK 136 + + G + + Sbjct: 192 EIQIEGRAVGFCR 204 >UniRef50_B0MB88 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MB88_9FIRM Length = 209 Score = 112 bits (282), Expect = 3e-24, Method: Composition-based stats. Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 9/128 (7%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 V + V G P A + + ++ + + + + ++ G+SM + S+G Sbjct: 78 HNAVEINVLG-RVAAGIPIDAVEEIIDTEEITEDMAKT-GTFFGLQIHGNSM-EPKFSEG 134 Query: 70 DLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL-RPTVQLIPMNSAYSPITISS----ED 123 D++IV A DIVIA V+G E T KKL+ + LI N AY P+ S+ + Sbjct: 135 DVVIVRQQDDAETDDIVIAIVNGDEATCKKLKKYNDGIVLISTNPAYEPMYFSNKEIMDK 194 Query: 124 TLDVFGVV 131 + + GVV Sbjct: 195 PVKIIGVV 202 >UniRef50_B7LNL7 Repressor protein C2 n=5 Tax=Enterobacteriaceae RepID=B7LNL7_ESCF3 Length = 208 Score = 112 bits (281), Expect = 3e-24, Method: Composition-based stats. Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 12/135 (8%) Query: 9 LREIVTFPLFSDLVQCGFPSP--AADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGG- 65 + + P+ S VQ G + AA+ + ++ ++ ++ GDSM + Sbjct: 73 VTNMRRVPVIS-WVQAGQFTECRAAEVFSEVDKWVDTSLKIGDNSFALEVKGDSMTNPNG 131 Query: 66 ---ISDGDLLIVDSAITASHGDIVIAAVDG--EFTVKKLQLRP-TVQLIPMNSAYSPITI 119 I +G +IVD HG IVIA +DG E TVKKL + L+P+N Y I I Sbjct: 132 LPTIPEGATVIVDPDAEPRHGKIVIARLDGTNEATVKKLVIDGPQKFLVPLNPRYPNIPI 191 Query: 120 SSEDTLDVFGVVIHV 134 + + GVV V Sbjct: 192 NG--NCLIIGVVKGV 204 >UniRef50_A5UQF5 LexA repressor n=7 Tax=Bacteria RepID=LEXA_ROSS1 Length = 218 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 11/134 (8%) Query: 14 TFPLFSDLVQCGFPSPAADY----VEQRIDLNQLLIQHPS--ATYFVKASGDSMIDGGIS 67 PL + G P P + + I++ L Y +K G SMID I Sbjct: 86 RVPLLGV-ITAGQPLPNPEDTSTTAVEMIEVPVDLAPPEKLQNVYALKVRGHSMIDALID 144 Query: 68 DGDLLIVDSAITASHGDIVIAAV--DGEFTVKKLQLRP-TVQLIPMNSAYSPITISSEDT 124 DGD++++ TA +G +V + D T+K+ V+L P N PI + + Sbjct: 145 DGDIVLMRYQETADNGQMVAVRIEDDNAVTLKRFYREGDKVRLQPANVTMEPIYVDAA-R 203 Query: 125 LDVFGVVIHVVKAM 138 + + G V+ V+++M Sbjct: 204 VHIQGRVVGVLRSM 217 >UniRef50_B5JUJ7 LexA repressor n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUJ7_9GAMM Length = 196 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 8/128 (6%) Query: 14 TFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLI 73 T PL + G P A +Q++DLN L S Y ++ GDSM++ GI DGD ++ Sbjct: 74 TLPLMG-RIAAGQPIEAV-NDQQQLDLNSLFAG--SNRYALQVKGDSMVEAGICDGDWVV 129 Query: 74 VDSAITASHGDIVIAAVDGE-FTVKK--LQLRPTVQLIPMNSAYSPITISSEDTLDVFGV 130 ++SA TA +GDIV+A VD E T+K + V LIP NSA + + E+ + + G+ Sbjct: 130 IESAQTARNGDIVVALVDDEDATLKTIDYRAGGQVALIPSNSAMEAM-VYPEERVQIQGI 188 Query: 131 VIHVVKAM 138 + ++ Sbjct: 189 LKGQLRVY 196 >UniRef50_B1BVI0 LexA repressor n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BVI0_CLOPE Length = 368 Score = 112 bits (281), Expect = 4e-24, Method: Composition-based stats. Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 6/132 (4%) Query: 10 REIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDG 69 + + P+ V G PS A + + I L + + +K GDSM + DG Sbjct: 235 SKYIRIPILGV-VAAGNPSYACENILDNIYLPKGNFSSSFTYFGLKVKGDSMNEL-FEDG 292 Query: 70 DLLIVDSAITASHGDIVIAAVDGEFTVKKLQLRP-TVQLIPM--NSAYSPITISSEDTLD 126 +++I+ + DIVIA V E T K+ + LIP NS + S D + Sbjct: 293 EVIIIRKTSLVHNDDIVIAFVGDEATCKEYYYDGNNINLIPHSTNSKHKKQVYSV-DEVK 351 Query: 127 VFGVVIHVVKAM 138 + G+V + Sbjct: 352 IIGLVEGSLNDF 363 >UniRef50_C6IXM6 SOS-response transcriptional repressor n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IXM6_9BACL Length = 290 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 7/124 (5%) Query: 16 PLFSDLVQCGFPSPAADYVEQ-RIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P++ + G P + E R+ + + + VK GDSM D GI +G +IV Sbjct: 161 PIWGE-AAAGIPIESIRMYEGKRLRVPAKYNK----CFAVKVKGDSMKDSGILNGGYVIV 215 Query: 75 DSAITASHGDIVIAAVDGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVVIH 133 S DI + ++ + T+K+ LR V LI N + P+ + V G V++ Sbjct: 216 RSQNMVDDDDIALMMIENQATIKRFHLRGNDVVLISDNDDFEPMVFHRSKEMQVVGKVVY 275 Query: 134 VVKA 137 ++ Sbjct: 276 YIRP 279 >UniRef50_C0N4P0 LexA repressor n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N4P0_9GAMM Length = 202 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 51/141 (36%), Positives = 74/141 (52%), Gaps = 9/141 (6%) Query: 2 LFIKPADLR-EIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDS 60 L +P D+ + VT P+ + G A E IDL+ + + +K +GDS Sbjct: 66 LTEQPEDIAADPVTLPVMG-KIAAGRLVEAVAD-ESEIDLSDMFTG--KGRFVLKVNGDS 121 Query: 61 MIDGGISDGDLLIVDSAITASHGDIVIAAVDG-EFTVKKLQL--RPTVQLIPMNSAYSPI 117 MID I GD ++V S TA HGDIV+A VDG + T+K L L TV L+P NS Y + Sbjct: 122 MIDKAIMSGDYVVVQSQSTARHGDIVVALVDGFDATLKTLLLNDDGTVTLMPANSHYEAV 181 Query: 118 TISSEDTLDVFGVVIHVVKAM 138 T+ D + V G+V+ ++ Sbjct: 182 TL-PADRVRVQGIVVGQLRTY 201 >UniRef50_O32506 LexA repressor n=1 Tax=Deinococcus radiodurans RepID=LEXA_DEIRA Length = 210 Score = 112 bits (280), Expect = 5e-24, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 5/122 (4%) Query: 15 FPLFSDLVQCGFPSPAADYVEQRIDLNQLLIQHPSATYFVKASGDSMIDGGISDGDLLIV 74 P++ + G P+ A E + L+ + + ++ G+SM G+ DGD ++V Sbjct: 76 LPIYGQ-IAAGIPALAEQSPEDFTPSIEALLGLKAGDFLLRVRGESMTGIGVMDGDYVVV 134 Query: 75 DSAITASHGDIVIAAV--DGEFTVKKLQLRPT-VQLIPMNSAYSPITISSEDTLDVFGVV 131 A G++ + V D T+K+L + L N A ++ +E + V G + Sbjct: 135 RPAPEVHDGEVAVVLVPGDNAATLKRLYHFGQDILLTSENPAMPRLSFPAEQ-VQVQGRM 193 Query: 132 IH 133 + Sbjct: 194 VG 195 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.179 0.544 Lambda K H 0.267 0.0551 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,103,418,945 Number of Sequences: 3077464 Number of extensions: 55098003 Number of successful extensions: 134724 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1067 Number of HSP's successfully gapped in prelim test: 1250 Number of HSP's that attempted gapping in prelim test: 130485 Number of HSP's gapped (non-prelim): 2350 length of query: 139 length of database: 1,040,396,356 effective HSP length: 103 effective length of query: 36 effective length of database: 723,417,564 effective search space: 26043032304 effective search space used: 26043032304 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 88 (38.1 bits)