Phyre 2 alignment of P31125 with c1w8xP_

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Job Description | P31125
Confidence | 7.39% | Date | Thu Jan 5 11:47:10 GMT 2012
Rank | 7 | Aligned Residues | 32
% Identity | 25% | Template | c1w8xP_
PDB info | PDB header:virus | Chain: P: PDB Molecule:protein p16; | PDBTitle: structural analysis of prd1
Resolution | 4.20 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 265 | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | R | L | T | G | L | Q | F | L | G | A | V | L | I | M | T | G | L | Y | I | N | V | F | G | L | R | W | R | K | A | V | K | V | G | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | D | K | K | K | L | L | Y | W | V | G | G | G | L | V | L | I | . | . | . | L | I | W | L | W | F | R | N | R | P | A | A | Q | V | A | S
Template Known Secondary structure |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  | T | T |  | S |  | S | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . |  |  |  | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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