15/01/2012 23:00:51 : INFO  : Run start: Sun Jan 15 23:00:49 GMT 2012
15/01/2012 23:01:01 : INFO  : Initialised job
15/01/2012 23:01:04 : INFO  : Renaming log file 'phyre2_20120115_230048.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/566e556a278c732a/phyre_20120115_230048.log'
15/01/2012 23:01:06 : INFO  : Initialised job:
Sequence
>batch____
MSRKDGVLALLVVVVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVARPKVPLNL
LLGYGLTISFAQFAFLFCAINFGMPAGLASLVLQAQAFFTIMLGAFTFGERLHGKQLAGI
ALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVIW
SALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYE
TWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMTGLYINVFGLRWRKAVKVGS

15/01/2012 23:01:08 : INFO  : Checked sequence
15/01/2012 23:01:14 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 23:01:16 : INFO  : PSI-BLAST 3 iterations
15/01/2012 23:04:25 : INFO  : PSI-BLAST 5 iterations
15/01/2012 23:09:49 : INFO  : Finished PSI-BLAST
15/01/2012 23:09:54 : INFO  : Running Buildali to generate a3m file
16/01/2012 00:16:00 : INFO  : Converting to HMM
16/01/2012 00:16:11 : INFO  : Calibrating HMM
16/01/2012 00:16:31 : INFO  : Searching HMM database
16/01/2012 00:22:16 : INFO  : Finished buildali
16/01/2012 00:22:20 : INFO  : Predicting secondary structure
16/01/2012 00:22:38 : INFO  : Predicted secondary structure (PSI-Pred)
16/01/2012 00:22:41 : INFO  : Predicting Disordered regions
16/01/2012 00:22:50 : INFO  : Predicted Disorder (Disopred)
16/01/2012 00:22:54 : INFO  : Running memsat_svm check
16/01/2012 00:26:55 : INFO  : Globular protein
16/01/2012 00:26:58 : INFO  : Predicted Transmembrane (memsat_svm) ID '566e556a278c732a'
16/01/2012 00:27:02 : INFO  : Initialising fold library search
16/01/2012 00:27:09 : INFO  : Initialised search input
16/01/2012 00:27:14 : INFO  : Building Ensemble models
16/01/2012 00:27:22 : INFO  : Building hh.d1s7ba_.model.1.pdb
16/01/2012 00:27:56 : INFO  : Building d1s7ba_.1.pdb
16/01/2012 00:28:26 : INFO  : Building c2i68B_.2.pdb
16/01/2012 00:28:58 : INFO  : Building c1xioA_.3.pdb
16/01/2012 00:29:28 : INFO  : Building d1xioa_.4.pdb
16/01/2012 00:29:57 : INFO  : Building c2jp3A_.5.pdb
16/01/2012 00:30:27 : INFO  : Building c2rddB_.6.pdb
16/01/2012 00:30:56 : INFO  : Building c1w8xP_.7.pdb
16/01/2012 00:31:25 : INFO  : Building c2jwaA_.8.pdb
16/01/2012 00:31:55 : INFO  : Building c3aqpB_.9.pdb
16/01/2012 00:32:24 : INFO  : Building d2axtj1.10.pdb
16/01/2012 00:32:54 : INFO  : Building c3rkoF_.11.pdb
16/01/2012 00:33:26 : INFO  : Building c1wazA_.12.pdb
16/01/2012 00:33:54 : INFO  : Building c3hfxA_.13.pdb
16/01/2012 00:34:24 : INFO  : Building c2l2tA_.14.pdb
16/01/2012 00:34:52 : INFO  : Building c1q90R_.15.pdb
16/01/2012 00:35:25 : INFO  : Building d1q90r_.16.pdb
16/01/2012 00:35:53 : INFO  : Building c3lrcC_.17.pdb
16/01/2012 00:36:24 : INFO  : Building c2jagA_.18.pdb
16/01/2012 00:36:56 : INFO  : Building d1e12a_.19.pdb
16/01/2012 00:37:27 : INFO  : Building d1y5ic1.20.pdb
16/01/2012 00:38:29 : INFO  : Finished HH model building
16/01/2012 00:38:33 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
16/01/2012 00:41:26 : INFO  : html domain output complete ID '566e556a278c732a'
16/01/2012 00:52:39 : INFO  : Run end  : Mon Jan 16 00:52:36 GMT 2012
