57 d1juba_ Probab=99.52   E-value=5.2e-13  Score=91.39  Aligned_columns=179  Identities=13%

Q ss_pred             HHCCEEEEECCCCHHHHHHHHHHHHHCC-CCEEEEECCCCC-------------HHHHHHHHHHHCCCCEEEECCCCCCH
Q ss_conf             3288499980799899999999999889-989999678855-------------79999999987497289914778998
Q batch____         5 TKLPLIAILRGITPDEALAHVGAVIDAG-FDAVEIPLNSPQ-------------WEQSIPAIVDAYGDKALIGAGTVLKP   70 (205)
Q Consensus         5 ~~~pii~~i~~~~~~~~~~~a~~~~~~G-~~~ie~~~~~~~-------------~~~~i~~l~~~~~~~~~i~~~~~~~~   70 (205)
                      ...|+++.+.+.+++++...++.+.+.| +++++++++|++             ..+.++.+++..+.++.+........
T Consensus        92 ~~~pi~~~i~~~~~~~~~~~~~~~~~~~~a~~i~in~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~pv~~k~~~~~~~  171 (311)
T d1juba_          92 QEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDL  171 (311)
T ss_dssp             SSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCCCSH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC
T ss_conf             89469997168998999999987652358987733786655432003204989999999999972289411010477764


Q ss_pred             HHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEECCH----------HHHHHHHHCCCCEEEECCCCCCCHHHHHH
Q ss_conf             99999840575498479898899999985898499850899----------99999986488889735767888689998
Q batch____        71 EQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATA----------TEAFTALEAGAQALKIFPSSAFGPQYIKA  140 (205)
Q Consensus        71 ~~~~~a~~~~a~~i~~~~~~~~~~~~~~~~g~~~~~~v~t~----------~e~~~a~~~G~~~v~~~~~~~~~~~~~~~  140 (205)
                      .......                 +.+.+.|...+...++.          ............+....+..+.....+..
T Consensus       172 ~~~~~~a-----------------~~~~~~G~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~a~~~~~~  234 (311)
T d1juba_         172 VHFDIMA-----------------EILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRA  234 (311)
T ss_dssp             HHHHHHH-----------------HHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHH
T ss_pred             CCHHHHH-----------------HHHHHCCCCEEEEECCCCCCCEECCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             0029999-----------------88873798699970886532102232100001334445664641104689999999


Q ss_pred             HHHCCCCCCEEEEECCC-CHHHHHHHHHCCCCEEEEEHHHHCC-CCHHHHHHHHHHHHHHHH
Q ss_conf             75205788169854689-9899999996399899995123279-983899999999999999
Q batch____       141 LKAVLPSDIAVFAVGGV-TPENLAQWIDAGCAGAGLGSDLYRA-GQSVERTAQQAAAFVKAY  200 (205)
Q Consensus       141 ~~~~~~~~ipi~a~GGi-s~~~v~~~l~~Ga~~V~vgsal~~~-~~~~~~~~~~~~~~~~~~  200 (205)
                      +.....+++||++.||| |++|+.+++.+|||+|++||+++.. .+.++++.+.++.+++..
T Consensus       235 ~~~~~~~~ipii~~GGI~~~~dv~k~l~lGAdaV~igta~~~~g~~~~~~i~~eL~~~m~~~  296 (311)
T d1juba_         235 FYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQK  296 (311)
T ss_dssp             HHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHCCHHHHHHHHHHHHHHHHHC
T ss_conf             88850789669994787999999999972998999927888525899999999999999982