301 c3na8A_ Probab=95.24   E-value=0.2  Score=27.21  Aligned_columns=149  Identities=16%

Q ss_pred             HHCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE------ECCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
Q ss_conf             3288499980799899999999999889989999------6788557999999998749728991477899899999840
Q batch____         5 TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEI------PLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALAR   78 (205)
Q Consensus         5 ~~~pii~~i~~~~~~~~~~~a~~~~~~G~~~ie~------~~~~~~~~~~i~~l~~~~~~~~~i~~~~~~~~~~~~~a~~   78 (205)
                      ++.|+|+-+-..+.++..++++.+.+.|++++-+      +.+.+...+.++.+.+..+.|+.++..+            
T Consensus        70 ~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~pP~~~~~s~~~i~~~~~~ia~a~~~pi~iYn~P------------  137 (290)
T c3na8A_          70 HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVXVLPISYWKLNEAEVFQHYRAVGEAIGVPVXLYNNP------------  137 (290)
T ss_dssp             TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECH------------
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC------------
T ss_conf             99769997178999999999999986399899984887879998899999999995149989985088------------


Q ss_pred             CCCCEEECCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCCCEEEEECCCC
Q ss_conf             57549847989889999998589849985089999999986488889735767888689998752057881698546899
Q batch____        79 MGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVT  158 (205)
Q Consensus        79 ~~a~~i~~~~~~~~~~~~~~~~g~~~~~~v~t~~e~~~a~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~ipi~a~GGis  158 (205)
                         ...........+.+.+.+..-.++.--++                      ........++...+....+...... 
T Consensus       138 ---~~tg~~~~~~~l~~l~~~~p~v~g~K~s~----------------------~~~~~~~~~~~~~~~~~~~~g~d~~-  191 (290)
T c3na8A_         138 ---GTSGIDXSVELILRIVREVDNVTXVKEST----------------------GDIQRXHKLRLLGEGRVPFYNGNPL-  191 (290)
T ss_dssp             ---HHHSCCCCHHHHHHHHHHSTTEEEEEECS----------------------SCHHHHHHHHHHTTTCSCEEECCTT-
T ss_pred             ---CCCCCCCCHHHHHHHHHHCCCEEECCCCC----------------------CCHHHHHHHHHHCCCCEEEECCHHH-
T ss_conf             ---53467789899999996289889836688----------------------8989999999747992999669799-


Q ss_pred             HHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             89999999639989999512327998389999999999999998
Q batch____       159 PENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYRE  202 (205)
Q Consensus       159 ~~~v~~~l~~Ga~~V~vgsal~~~~~~~~~~~~~~~~~~~~~r~  202 (205)
                         ....+..|+++...|.+-+        .-+...++.+++++
T Consensus       192 ---~~~~l~~G~~G~~~~~~n~--------~P~~~~~~~~a~~~  224 (290)
T c3na8A_         192 ---ALEAFVAGAKGWCSAAPNL--------IPTLNGQLYQAVLD  224 (290)
T ss_dssp             ---HHHHHHHTCSEEEESGGGT--------CHHHHHHHHHHHHT
T ss_pred             ---HHHHHHHCCCEEHHHHHHH--------HHHHHHHHHHHHHC
T ss_conf             ---9999996888554768988--------89999999999986