BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (231 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia... 466 e-130 UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmone... 105 1e-21 UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkhol... 62 1e-08 UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkhol... 41 0.025 UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmone... 40 0.078 >UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia coli K-12 RepID=YUAM_ECOLI Length = 231 Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN Sbjct: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 Query: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA Sbjct: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 Query: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF Sbjct: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 Query: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT Sbjct: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 >UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4A4A4_SALNE Length = 191 Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 70/182 (38%), Positives = 108/182 (59%), Gaps = 12/182 (6%) Query: 56 YGPFNTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDE 115 Y F+ + A LY +N I G+ YL P+I +K++ NFK E+ N+LI +ID+DE Sbjct: 5 YKVFDLPKQPFILPAFVLYALNSIAGIIYLFTPIIPGVKFMLNFKKEIFNDLICEIDNDE 64 Query: 116 QHIEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNG-G 174 Q+IE L+PYSL EL Y + + ++I ++KS+ + G KTA++SI+ L+YSA V G G Sbjct: 65 QNIEKLMPYSLTELNYSIDWLNIKIQRVKSRINDFFGEKTAVLSIIGLAYSA---VQGFG 121 Query: 175 SID--------GIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKI 226 +D G+F T + +IV + F+L SL + K +LQ LK ++++T KI Sbjct: 122 GLDKLGDTISKGLFNSGTTNTLIVFGLAFLLGLSLGALALKNVANHLQYLKEVLELTKKI 181 Query: 227 KR 228 K Sbjct: 182 KE 183 >UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHI8_9BURK Length = 241 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 38/172 (22%), Positives = 82/172 (47%), Gaps = 4/172 (2%) Query: 2 MYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFNT 61 M + I++ ++ Y P K+ AER K+ + + V+ LLAI Y + Sbjct: 1 MQDMKAILKDLSSAEPYRPSKKL--FAERSRKLSALMLALGVLCMILLAISGFWYKA--S 56 Query: 62 KSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEAL 121 + + +A + + + + G+ + V I + +K E ++ + +I++DE H++ L Sbjct: 57 HAPILVYAAFTFWVLTTLFGILTMLVEPIAMFIVMLRWKAETMDTFVREIENDEAHVKRL 116 Query: 122 LPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNG 173 + + E L V +Q+++ ++ ++ + GG A+ S+ L+ S I G Sbjct: 117 VRHEEEALRRVQYWLQLKVKRLDARIVFFFGGSAAVYSLFALTLSNIKDAGG 168 >UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z1X4_BURA4 Length = 244 Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Query: 70 ALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEALLPYSLEEL 129 AL + I + L V VI + FK + LI +I+ D H LL + + L Sbjct: 73 ALFIGIATTIFALVSLVVDVIPAAVMLVRFKQNSLKRLILEIEHDSMHARKLLIFDRQLL 132 Query: 130 TYVSNCIQVRIPKIKSKC--FLWGGGKTAIISILCLSYSAI 168 + +RI +IK + FL G K AI+++ + ++ + Sbjct: 133 ERTDAWLSIRIARIKDRLGFFLGGAEKVAILALGSMGWATL 173 >UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 RepID=B5PW78_SALHA Length = 232 Score = 39.7 bits (91), Expect = 0.078, Method: Compositional matrix adjust. Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 7/166 (4%) Query: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 M+YRV+ I+ +N T + + E L+K ++S ++SF LL ++ L +G + Sbjct: 1 MLYRVDEILGYLNRCERTTSNQ--SDPLEILAK--RLSLRGLIVSFILLLLMLLPFGIYA 56 Query: 61 TKSNLSFISALSLYFINVIMG--VTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHI 118 I ++FI +++ T L P + + ++ +K + + ++ DE H+ Sbjct: 57 HFPEGVLIRVSQIFFILLMLSCIFTLLVEPALMLLG-LFKWKTMTLTRFLKEVREDEGHV 115 Query: 119 EALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLS 164 L Y+ +EL Y + +I +++ + G KTAI ++L S Sbjct: 116 ATLERYAEKELQYAEYQLVKKITANENRIKFFFGEKTAIFALLAFS 161 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia... 295 6e-79 UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkhol... 225 9e-58 UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmone... 197 2e-49 Sequences not found previously or not previously below threshold: UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmone... 77 4e-13 UniRef50_Q6B3A5 Putative uncharacterized protein n=1 Tax=uncultu... 76 9e-13 UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkhol... 63 1e-08 >UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia coli K-12 RepID=YUAM_ECOLI Length = 231 Score = 295 bits (756), Expect = 6e-79, Method: Composition-based stats. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN Sbjct: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 Query: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA Sbjct: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 Query: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF Sbjct: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 Query: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT Sbjct: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 >UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHI8_9BURK Length = 241 Score = 225 bits (574), Expect = 9e-58, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 10/232 (4%) Query: 2 MYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFNT 61 M + I++ ++ Y P K+ AER K+ + + V+ LLAI Y + Sbjct: 1 MQDMKAILKDLSSAEPYRPSKKL--FAERSRKLSALMLALGVLCMILLAISGFWYKA--S 56 Query: 62 KSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEAL 121 + + +A + + + + G+ + V I + +K E ++ + +I++DE H++ L Sbjct: 57 HAPILVYAAFTFWVLTTLFGILTMLVEPIAMFIVMLRWKAETMDTFVREIENDEAHVKRL 116 Query: 122 LPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGS------ 175 + + E L V +Q+++ ++ ++ + GG A+ S+ L+ S I G S Sbjct: 117 VRHEEEALRRVQYWLQLKVKRLDARIVFFFGGSAAVYSLFALTLSNIKDAGGLSWLEHTF 176 Query: 176 IDGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIK 227 + G + I+ + + S+ M K ++++ + K Sbjct: 177 LRGFAADNLANTAILWGIALVFGVSIGAMLMKVVQGRYAYHAELVELALMRK 228 >UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4A4A4_SALNE Length = 191 Score = 197 bits (501), Expect = 2e-49, Method: Composition-based stats. Identities = 68/181 (37%), Positives = 107/181 (59%), Gaps = 10/181 (5%) Query: 56 YGPFNTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDE 115 Y F+ + A LY +N I G+ YL P+I +K++ NFK E+ N+LI +ID+DE Sbjct: 5 YKVFDLPKQPFILPAFVLYALNSIAGIIYLFTPIIPGVKFMLNFKKEIFNDLICEIDNDE 64 Query: 116 QHIEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGS 175 Q+IE L+PYSL EL Y + + ++I ++KS+ + G KTA++SI+ L+YSA+ G Sbjct: 65 QNIEKLMPYSLTELNYSIDWLNIKIQRVKSRINDFFGEKTAVLSIIGLAYSAVQ--GFGG 122 Query: 176 ID--------GIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIK 227 +D G+F T + +IV + F+L SL + K +LQ LK ++++T KIK Sbjct: 123 LDKLGDTISKGLFNSGTTNTLIVFGLAFLLGLSLGALALKNVANHLQYLKEVLELTKKIK 182 Query: 228 R 228 Sbjct: 183 E 183 >UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 RepID=B5PW78_SALHA Length = 232 Score = 77.3 bits (189), Expect = 4e-13, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 101/239 (42%), Gaps = 19/239 (7%) Query: 1 MMYRVNHIMRTINEMSSYTPHMK--VNRIAERLSKVQKISFCISVISFFLLAIITLTYGP 58 M+YRV+ I+ +N T + + +A+R +S ++SF LL ++ L +G Sbjct: 1 MLYRVDEILGYLNRCERTTSNQSDPLEILAKR------LSLRGLIVSFILLLLMLLPFGI 54 Query: 59 F-NTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQH 117 + + + + + + ++ + L V + ++ +K + + ++ DE H Sbjct: 55 YAHFPEGVLIRVSQIFFILLMLSCIFTLLVEPALMLLGLFKWKTMTLTRFLKEVREDEGH 114 Query: 118 IEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSI- 176 + L Y+ +EL Y + +I +++ + G KTAI ++L S + + G + Sbjct: 115 VATLERYAEKELQYAEYQLVKKITANENRIKFFFGEKTAIFALLAFSVPFMKDLFGRELN 174 Query: 177 -------DGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKR 228 DG + D ++ + I SL + K + ++ T+ IK+ Sbjct: 175 LSAFRWEDGF--SGSVDILLGFVWALIFGMSLGAVALKLVTERYKYQLSLLKQTLWIKK 231 >UniRef50_Q6B3A5 Putative uncharacterized protein n=1 Tax=uncultured proteobacterium QS1 RepID=Q6B3A5_9PROT Length = 232 Score = 76.2 bits (186), Expect = 9e-13, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 91/231 (39%), Gaps = 12/231 (5%) Query: 1 MMYRVNHIMRTINEMSSYTPHM-KVNRIAERLSKVQKISFCISVISFFLLAIITLTY--G 57 M ++ ++ + E+SS P + + + + +SV+ ++A Y Sbjct: 1 MTPPIDKTIQVLEELSSCEPRKVRRTGVENKARVIANWCLGLSVLFLIIMACFFFFYDTR 60 Query: 58 PFNTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQH 117 P + + + L + I++++ ++ L P++ + + +K + L DI ++ Sbjct: 61 PPSIYAQIFV---LMMSVISMLLAISTLIAPMVASFLLAFRWKKLSLEGLCDDIRHEQAM 117 Query: 118 IEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNG---- 173 + L Y L + +I +I + + G KTA+I +L +YS G Sbjct: 118 ADRLAKYESVALKDAHFWLSRKIRRISERTGRFFGEKTAVIGLLATAYSFTAEFGGVEWI 177 Query: 174 --GSIDGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDM 222 G G G+ +++ +L S+ ++ + I+++ Sbjct: 178 SKTMAAGFRAGNLGNTLLLGAGALLLGMSIGSILLGHIAARYRYQIEIVEL 228 >UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z1X4_BURA4 Length = 244 Score = 62.7 bits (151), Expect = 1e-08, Method: Composition-based stats. Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 4/199 (2%) Query: 8 IMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFNTKSNLSF 67 I++ ++ M+ P + ++ + + V+ F +L + Sbjct: 11 ILKMLDGMTQLPPQAMQTAFDKWVAFIAAVCRWTGVVLFAILLGFVGWVKFIHPIQGGWL 70 Query: 68 ISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEALLPYSLE 127 AL + I + L V VI + FK + LI +I+ D H LL + + Sbjct: 71 TLALFIGIATTIFALVSLVVDVIPAAVMLVRFKQNSLKRLILEIEHDSMHARKLLIFDRQ 130 Query: 128 ELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIFVGETGDK 187 L + +RI +IK + + GG + L+ ++ ++ + + Sbjct: 131 LLERTDAWLSIRIARIKDRLGFFLGGAEKVA---ILALGSMGWATLNTLKSLQNTWQQNA 187 Query: 188 IIVAIMFFILYTSLMNMFF 206 + F+ ++ + Sbjct: 188 FL-YGAAFLGGLAIGGVML 205 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia... 238 9e-62 UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkhol... 216 6e-55 UniRef50_Q6B3A5 Putative uncharacterized protein n=1 Tax=uncultu... 197 3e-49 UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkhol... 193 4e-48 UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmone... 183 4e-45 UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmone... 169 5e-41 Sequences not found previously or not previously below threshold: UniRef50_A0Y6N2 Putative uncharacterized protein n=1 Tax=Alterom... 42 0.022 CONVERGED! >UniRef50_Q9JMS7 Uncharacterized protein yuaM n=1 Tax=Escherichia coli K-12 RepID=YUAM_ECOLI Length = 231 Score = 238 bits (608), Expect = 9e-62, Method: Composition-based stats. Identities = 231/231 (100%), Positives = 231/231 (100%) Query: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN Sbjct: 1 MMYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN 60 Query: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA Sbjct: 61 TKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEA 120 Query: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF Sbjct: 121 LLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIF 180 Query: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT Sbjct: 181 VGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKRNFT 231 >UniRef50_D1UHI8 Putative uncharacterized protein n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UHI8_9BURK Length = 241 Score = 216 bits (549), Expect = 6e-55, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 10/232 (4%) Query: 2 MYRVNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFNT 61 M + I++ ++ Y P K+ AER K+ + + V+ LLAI Y + Sbjct: 1 MQDMKAILKDLSSAEPYRPSKKL--FAERSRKLSALMLALGVLCMILLAISGFWYKA--S 56 Query: 62 KSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEAL 121 + + +A + + + + G+ + V I + +K E ++ + +I++DE H++ L Sbjct: 57 HAPILVYAAFTFWVLTTLFGILTMLVEPIAMFIVMLRWKAETMDTFVREIENDEAHVKRL 116 Query: 122 LPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGS------ 175 + + E L V +Q+++ ++ ++ + GG A+ S+ L+ S I G S Sbjct: 117 VRHEEEALRRVQYWLQLKVKRLDARIVFFFGGSAAVYSLFALTLSNIKDAGGLSWLEHTF 176 Query: 176 IDGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIK 227 + G + I+ + + S+ M K ++++ + K Sbjct: 177 LRGFAADNLANTAILWGIALVFGVSIGAMLMKVVQGRYAYHAELVELALMRK 228 >UniRef50_Q6B3A5 Putative uncharacterized protein n=1 Tax=uncultured proteobacterium QS1 RepID=Q6B3A5_9PROT Length = 232 Score = 197 bits (501), Expect = 3e-49, Method: Composition-based stats. Identities = 38/231 (16%), Positives = 91/231 (39%), Gaps = 12/231 (5%) Query: 1 MMYRVNHIMRTINEMSSYTPHM-KVNRIAERLSKVQKISFCISVISFFLLAIITLTY--G 57 M ++ ++ + E+SS P + + + + +SV+ ++A Y Sbjct: 1 MTPPIDKTIQVLEELSSCEPRKVRRTGVENKARVIANWCLGLSVLFLIIMACFFFFYDTR 60 Query: 58 PFNTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQH 117 P + + + L + I++++ ++ L P++ + + +K + L DI ++ Sbjct: 61 PPSIYAQIFV---LMMSVISMLLAISTLIAPMVASFLLAFRWKKLSLEGLCDDIRHEQAM 117 Query: 118 IEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNG---- 173 + L Y L + +I +I + + G KTA+I +L +YS G Sbjct: 118 ADRLAKYESVALKDAHFWLSRKIRRISERTGRFFGEKTAVIGLLATAYSFTAEFGGVEWI 177 Query: 174 --GSIDGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDM 222 G G G+ +++ +L S+ ++ + I+++ Sbjct: 178 SKTMAAGFRAGNLGNTLLLGAGALLLGMSIGSILLGHIAARYRYQIEIVEL 228 >UniRef50_B1Z1X4 Putative uncharacterized protein n=1 Tax=Burkholderia ambifaria MC40-6 RepID=B1Z1X4_BURA4 Length = 244 Score = 193 bits (490), Expect = 4e-48, Method: Composition-based stats. Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 4/211 (1%) Query: 7 HIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFNTKSNLS 66 I++ ++ M+ P + ++ + + V+ F +L + Sbjct: 10 KILKMLDGMTQLPPQAMQTAFDKWVAFIAAVCRWTGVVLFAILLGFVGWVKFIHPIQGGW 69 Query: 67 FISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEALLPYSL 126 AL + I + L V VI + FK + LI +I+ D H LL + Sbjct: 70 LTLALFIGIATTIFALVSLVVDVIPAAVMLVRFKQNSLKRLILEIEHDSMHARKLLIFDR 129 Query: 127 EELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIFVGETGD 186 + L + +RI +IK + + GG + L+ ++ ++ + + Sbjct: 130 QLLERTDAWLSIRIARIKDRLGFFLGGAEKVA---ILALGSMGWATLNTLKSLQNTWQQN 186 Query: 187 KIIVAIMFFILYTSLMNMFFKQKLLYLQNLK 217 + F+ ++ + + + Sbjct: 187 AFL-YGAAFLGGLAIGGVMLNVIVQRYTYQR 216 >UniRef50_B5PW78 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066 RepID=B5PW78_SALHA Length = 232 Score = 183 bits (465), Expect = 4e-45, Method: Composition-based stats. Identities = 46/239 (19%), Positives = 101/239 (42%), Gaps = 19/239 (7%) Query: 1 MMYRVNHIMRTINEMSSYTPHMK--VNRIAERLSKVQKISFCISVISFFLLAIITLTYGP 58 M+YRV+ I+ +N T + + +A+R +S ++SF LL ++ L +G Sbjct: 1 MLYRVDEILGYLNRCERTTSNQSDPLEILAKR------LSLRGLIVSFILLLLMLLPFGI 54 Query: 59 F-NTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQH 117 + + + + + + ++ + L V + ++ +K + + ++ DE H Sbjct: 55 YAHFPEGVLIRVSQIFFILLMLSCIFTLLVEPALMLLGLFKWKTMTLTRFLKEVREDEGH 114 Query: 118 IEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSI- 176 + L Y+ +EL Y + +I +++ + G KTAI ++L S + + G + Sbjct: 115 VATLERYAEKELQYAEYQLVKKITANENRIKFFFGEKTAIFALLAFSVPFMKDLFGRELN 174 Query: 177 -------DGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKR 228 DG + D ++ + I SL + K + ++ T+ IK+ Sbjct: 175 LSAFRWEDGF--SGSVDILLGFVWALIFGMSLGAVALKLVTERYKYQLSLLKQTLWIKK 231 >UniRef50_B4A4A4 Putative uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Newport str. SL317 RepID=B4A4A4_SALNE Length = 191 Score = 169 bits (429), Expect = 5e-41, Method: Composition-based stats. Identities = 67/179 (37%), Positives = 105/179 (58%), Gaps = 6/179 (3%) Query: 56 YGPFNTKSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDE 115 Y F+ + A LY +N I G+ YL P+I +K++ NFK E+ N+LI +ID+DE Sbjct: 5 YKVFDLPKQPFILPAFVLYALNSIAGIIYLFTPIIPGVKFMLNFKKEIFNDLICEIDNDE 64 Query: 116 QHIEALLPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNG-- 173 Q+IE L+PYSL EL Y + + ++I ++KS+ + G KTA++SI+ L+YSA+ G Sbjct: 65 QNIEKLMPYSLTELNYSIDWLNIKIQRVKSRINDFFGEKTAVLSIIGLAYSAVQGFGGLD 124 Query: 174 ----GSIDGIFVGETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMIIDMTIKIKR 228 G+F T + +IV + F+L SL + K +LQ LK ++++T KIK Sbjct: 125 KLGDTISKGLFNSGTTNTLIVFGLAFLLGLSLGALALKNVANHLQYLKEVLELTKKIKE 183 >UniRef50_A0Y6N2 Putative uncharacterized protein n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0Y6N2_9GAMM Length = 232 Score = 41.6 bits (96), Expect = 0.022, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 75/219 (34%), Gaps = 12/219 (5%) Query: 5 VNHIMRTINEMSSYTPHMKVNRIAERLSKVQKISFCISVISFFLLAIITLTYGPFN---T 61 + I + ++ H+K N K K+ V +FL+ + + Sbjct: 1 MQKIFNELEDVLKSQNHLKSNFFGSLNIKSWKLFLAKFVALYFLIFAVFPFVSRIDNSVI 60 Query: 62 KSNLSFISALSLYFINVIMGVTYLSVPVINTIKYIYNFKGEVVNELIYDIDSDEQHIEAL 121 N+ +A+ + VI L ++NT + N + ++ DI ++ Sbjct: 61 SENIYPYTAMIFFITPVIYFFIKL---MMNTCTALKNPSYDFFKPIMKDISLHTNLVDKF 117 Query: 122 LPYSLEELTYVSNCIQVRIPKIKSKCFLWGGGKTAIISILCLSYSAICIVNGGSIDGIFV 181 + EL+ + I + K + G AI + + Y CI ++ Sbjct: 118 STFQSYELSQSIRRLTYDIERTKGRMGFLVG---AIEKLGIIPY---CITLCFALSNFLD 171 Query: 182 GETGDKIIVAIMFFILYTSLMNMFFKQKLLYLQNLKMII 220 G I + + F+ + + + L+ K+I+ Sbjct: 172 KNEGSTIYIYALAFLFGLYGGAIVTLKIIDKLEFFKVIL 210 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.326 0.137 0.321 Lambda K H 0.267 0.0419 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,127,385,518 Number of Sequences: 3077464 Number of extensions: 40820060 Number of successful extensions: 223242 Number of sequences better than 1.0e-01: 17 Number of HSP's better than 0.1 without gapping: 18 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 223196 Number of HSP's gapped (non-prelim): 38 length of query: 231 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 107 effective length of database: 658,790,820 effective search space: 70490617740 effective search space used: 70490617740 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 91 (39.6 bits)