67 d1nrfa_ Probab=97.34   E-value=0.01  Score=34.77  Aligned_columns=228  Identities=12%

Q ss_pred             HHHHHHHCCCCEEEEEEEEC-CEEEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
Q ss_conf             99999836998799999989-98999854331167788888775054332349999999999998799884641788282
Q batch____        39 ADHIFYGSGATGMALVVIDG-NQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLDQGTVKLNDPLSKYAP  117 (385)
Q Consensus        39 ~~~~~~~~~~pG~~~~v~~~-g~i~~~~~G~~d~~~~~~~~~~t~f~iaSvtK~~ta~~i~~Lve~Gkl~ldd~i~~ylp  117 (385)
                      ++++++++++-|..+++--+ |++...          .+-...+.|+-||+-|.||+++   +.|+|+++.++.+...-+
T Consensus        12 ~~~~~~~~~~~g~~vv~d~~tg~~~~~----------n~nra~~~~~PgStfK~~ta~a---aLe~g~~~~~~~~~~~~~   78 (246)
T d1nrfa_          12 YSTFFDKFSASGGFVLFNSNRKKYTIY----------NRKESTSRFAPASTYKVFSALL---ALESGIITKNDSHMTWDG   78 (246)
T ss_dssp             CHHHHHTTTEEEEEEEEETTTTEEEEE----------CHHHHHSCBCCGGGGHHHHHHH---HHHHTSSCSSCCCBCCCC
T ss_pred             HHHHHHHHCCCEEEEEEECCCCEEEEE----------CCCCCCCCCCCCCHHHHHHHHH---HHHCCCCCCCCEEECCCC
T ss_conf             999998718960899998899819983----------3310147879820689999999---998499898627864882


Q ss_pred             CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHH
Q ss_conf             10146855555553989621214877777654333343447998999999980887678997245404308999999999
Q batch____       118 PGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPTREQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALAN  197 (385)
Q Consensus       118 ~~~~~~~~~~~~ITi~~LLtHtSGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~Ysn~~y~ll~~iie~  197 (385)
                      .......++.. +|+++.+.+++-.                                               ....+.++
T Consensus        79 ~~~~~~~~~~~-~tl~~Al~~S~N~-----------------------------------------------~~~~l~~~  110 (246)
T d1nrfa_          79 TQYPYKEWNQD-QDLFSAMSSSTTW-----------------------------------------------YFQKLDRQ  110 (246)
T ss_dssp             CCCSSTTTSSC-BCHHHHHHHTCHH-----------------------------------------------HHHHHHHH
T ss_pred             EEECCCCCCCC-CCHHHHHHHCCHH-----------------------------------------------HHHHHHHC
T ss_conf             33020588985-1498967631038-----------------------------------------------67756512


Q ss_pred             HHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHCCEEECCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCCCCH
Q ss_conf             84279999999998646488656045883570551104357776567665578771005899999999999859866802
Q batch____       198 ASGKPYTQLFEEQITRPLGMKDTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQRS  277 (385)
Q Consensus       198 vtg~~~~~~l~~~i~~pLgm~~t~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~aggl~st~~Dla~~~~~~l~~~~~~~~  277 (385)
                      +....+.+++++     +|+.+.....+..                    ....|++..|+.+|+++...+.+++..-..
T Consensus       111 iG~~~~~~~~~~-----~G~g~~~~~~~~~--------------------~~~~g~~~vTPlq~a~~~~~ian~g~~~s~  165 (246)
T d1nrfa_         111 IGEDHLRHYLKS-----IHYGNEDFSVPAD--------------------YWLDGSLQISPLEQVNILKKFYDNEFDFKQ  165 (246)
T ss_dssp             HCHHHHHHHHHH-----TTCTTCCCSCTTT--------------------TTTSSSSCBCHHHHHHHHHHHHHTTTCCCH
T ss_pred             CCHHHHHHHHHH-----CCCCCCCCCCCCH--------------------HHHCCCEEEEHHHHHHHHHHHHCCCCCCCH
T ss_conf             698899999998-----1999866677763--------------------541571156389999999999619830699


Q ss_pred             HHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCEEEEEEEEC--CCCEEEEEEEECC
Q ss_conf             10476667775204345556676787655542232352168885228997088466657999982--5976999997288
Q batch____       278 NQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGFITYMAMIP--QKNIGAFVVVTRS  355 (385)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~~~~h~G~~~g~~s~~~~~P--e~~~~ivvl~N~~  355 (385)
                      .......-.......                 .|+..     .+..-....+......-++.+.|  +.++.|+++....
T Consensus       166 ~~~~~i~~~m~~~~~-----------------~g~~~-----agKTGta~~~~~~~~~WfvG~~p~~~~~~~iav~i~~~  223 (246)
T d1nrfa_         166 SNIETVKDSIRLEES-----------------NGRVL-----SGKTGTSVINGELHAGWFIGYVETADNTFFFAVHIQGE  223 (246)
T ss_dssp             HHHHHHHHHHEEEEE-----------------TTEEE-----EEEEEEEECSSSCEEEEEEEEEECSSCEEEEEEEEEES
T ss_pred             HHHHHHHHHHHHHCC-----------------CCCEE-----EEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECC
T ss_conf             999999988773214-----------------76212-----65143354678865358999997189819999999679


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q ss_conf             7420468999999999998
Q batch____       356 PLTRFKNMSDGINDLVTEL  374 (385)
Q Consensus       356 ~~~~~~~~~~~~~~l~~~l  374 (385)
                      ...........+.+++.+|
T Consensus       224 ~~~~~~~Aa~I~~~I~~~l  242 (246)
T d1nrfa_         224 KRAAGSSAAEIALSILDKK  242 (246)
T ss_dssp             CSCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHC
T ss_conf             8876247899999999975