BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (310 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P77700 Uncharacterized HTH-type transcriptional regulat... 645 0.0 UniRef50_UPI000197C658 DNA-binding transcriptional activator All... 219 1e-55 UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax... 215 1e-54 UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hon... 208 2e-52 UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 191 3e-47 UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=... 183 9e-45 UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacteriu... 180 6e-44 UniRef50_Q2TTU9 Transcriptional regulator n=17 Tax=Escherichia R... 178 2e-43 UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulat... 177 5e-43 UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=P... 174 3e-42 UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=M... 166 1e-39 UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=C... 157 4e-37 UniRef50_D0WIW9 HTH-type transcriptional activator AllS n=1 Tax=... 151 2e-35 UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=... 145 1e-33 UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=M... 145 2e-33 UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=D... 144 4e-33 UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bo... 143 1e-32 UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=... 140 6e-32 UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=V... 136 7e-31 UniRef50_A6GPV4 Probable transcriptional regulator transcription... 135 3e-30 UniRef50_P76369 Uncharacterized HTH-type transcriptional regulat... 132 2e-29 UniRef50_Q7NS01 Probable transcriptional regulator, LysR family ... 131 3e-29 UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=L... 129 1e-28 UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=... 129 2e-28 UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=B... 126 1e-27 UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=... 125 1e-27 UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=... 125 2e-27 UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteri... 123 1e-26 UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=P... 122 2e-26 UniRef50_A4BES5 Transcriptional regulator, LysR family protein n... 122 2e-26 UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=g... 119 1e-25 UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of ... 116 9e-25 UniRef50_A8GHI5 Transcriptional regulator, LysR family n=4 Tax=E... 113 9e-24 UniRef50_P67661 Uncharacterized HTH-type transcriptional regulat... 112 1e-23 UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=A... 112 1e-23 UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=... 107 5e-22 UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=... 107 8e-22 UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=B... 104 4e-21 UniRef50_A3QAQ4 Transcriptional regulator, LysR family n=1 Tax=S... 103 6e-21 UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n... 102 1e-20 UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=... 102 1e-20 UniRef50_A4A494 Transcriptional regulator, LysR family protein n... 101 3e-20 UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=D... 100 1e-19 UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=B... 96 2e-18 UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n... 95 3e-18 UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding... 95 4e-18 UniRef50_C5BEG7 Transcriptional regulator, LysR family protein n... 92 3e-17 UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales ... 91 4e-17 UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=C... 91 5e-17 UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=A... 91 7e-17 UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria... 90 8e-17 UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=M... 90 1e-16 UniRef50_A8FU64 Transcriptional regulator, LysR family n=1 Tax=S... 89 1e-16 UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=P... 89 2e-16 UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=D... 88 3e-16 UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=S... 87 6e-16 UniRef50_Q161W6 Transcriptional regulator, LysR family n=1 Tax=R... 87 6e-16 UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=G... 87 7e-16 UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=... 86 2e-15 UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=R... 86 2e-15 UniRef50_Q12M83 Transcriptional regulator, LysR family n=21 Tax=... 84 6e-15 UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Ph... 84 7e-15 UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=M... 84 8e-15 UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=... 83 1e-14 UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1... 83 1e-14 UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=L... 83 2e-14 UniRef50_Q1D4Y5 Transcriptional regulator, LysR family n=1 Tax=M... 82 2e-14 UniRef50_Q5R026 Transcriptional regulator, LysR family n=2 Tax=I... 82 2e-14 UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejue... 81 4e-14 UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=O... 81 5e-14 UniRef50_B8CRL7 Transcriptional regulator, LysR family n=2 Tax=G... 81 5e-14 UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=... 80 6e-14 UniRef50_Q65QL0 LysR protein n=1 Tax=Mannheimia succiniciproduce... 80 1e-13 UniRef50_A6VRP1 Transcriptional regulator, LysR family n=1 Tax=M... 80 1e-13 UniRef50_Q6MID3 Transcriptional regulator, LysR family n=1 Tax=B... 79 1e-13 UniRef50_B1ZXA6 Transcriptional regulator, LysR family n=2 Tax=V... 79 2e-13 UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=P... 79 2e-13 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 79 3e-13 UniRef50_B6R8I7 Transcriptional regulator, LysR family n=1 Tax=P... 78 3e-13 UniRef50_B8CUJ1 Transcriptional Regulator, LysR family n=1 Tax=S... 78 3e-13 UniRef50_A6CXR5 LysR, substrate-binding protein n=1 Tax=Vibrio s... 78 4e-13 UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2... 78 4e-13 UniRef50_C8Q1Z8 Transcriptional regulator, LysR family n=1 Tax=P... 78 5e-13 UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n... 78 5e-13 UniRef50_C4LEH9 Transcriptional regulator, LysR family n=1 Tax=T... 77 5e-13 UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=R... 77 6e-13 UniRef50_Q0KAS3 Transcriptional regulator, LysR-family n=3 Tax=B... 77 6e-13 UniRef50_B7VQ88 Hypothetical transcriptional regulator n=7 Tax=G... 77 6e-13 UniRef50_C1DLB3 LysR family transcriptional regulator protein n=... 77 7e-13 UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=C... 77 7e-13 UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=P... 77 1e-12 UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=V... 77 1e-12 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 76 1e-12 UniRef50_B9JTU6 Transcriptional regulator LysR family n=3 Tax=Pr... 76 2e-12 UniRef50_A9KS97 Transcriptional regulator, LysR family n=1 Tax=C... 76 2e-12 UniRef50_C8QAK2 Transcriptional regulator, LysR family n=1 Tax=P... 76 2e-12 UniRef50_A9BPP0 Transcriptional regulator, LysR family n=8 Tax=c... 76 2e-12 UniRef50_Q2T002 Transcriptional regulator, LysR family n=103 Tax... 76 2e-12 UniRef50_B1J7T4 Transcriptional regulator, LysR family n=1 Tax=P... 76 2e-12 UniRef50_A0XZG1 Putative transcriptional regulator with periplas... 75 2e-12 UniRef50_B2T3D8 Transcriptional regulator, LysR family n=2 Tax=B... 75 2e-12 UniRef50_A9D356 Transcriptional regulator, LysR family protein n... 75 3e-12 UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ... 75 3e-12 UniRef50_A8GHE2 Transcriptional regulator, LysR family n=2 Tax=S... 75 4e-12 UniRef50_A8H826 Transcriptional regulator, LysR family n=1 Tax=S... 75 4e-12 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 75 4e-12 UniRef50_A6CV53 Transcriptional regulator, LysR family protein n... 75 4e-12 UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n... 74 5e-12 UniRef50_A8H1M6 Transcriptional regulator, LysR family n=6 Tax=G... 74 5e-12 UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=C... 74 5e-12 UniRef50_B7H1A2 Bacterial regulatory helix-turn-helix protein, l... 74 5e-12 UniRef50_A4SRE3 Transcriptional regulator, LysR family n=3 Tax=G... 74 5e-12 UniRef50_D2BW38 Transcriptional regulator, LysR family n=19 Tax=... 74 6e-12 UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=P... 74 6e-12 UniRef50_D0XGW3 Putative uncharacterized protein n=1 Tax=Vibrio ... 74 7e-12 UniRef50_B2IKQ3 Transcriptional regulator, LysR family n=3 Tax=P... 74 8e-12 UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=D... 74 8e-12 UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=P... 74 8e-12 UniRef50_A6VKL9 Transcriptional regulator, LysR family n=1 Tax=A... 73 1e-11 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 73 1e-11 UniRef50_D0X470 Transcriptional activator of LysR family n=1 Tax... 73 1e-11 UniRef50_C7JIT8 Transcriptional regulator LysR n=8 Tax=Acetobact... 73 1e-11 UniRef50_B6EJX0 HTH-type transcription regulator, LysR family n=... 73 1e-11 UniRef50_P55576 Uncharacterized HTH-type transcriptional regulat... 73 1e-11 UniRef50_D2RMQ6 Transcriptional regulator, LysR family n=1 Tax=A... 73 1e-11 UniRef50_Q2S7W3 Transcriptional regulator n=1 Tax=Hahella chejue... 73 1e-11 UniRef50_C6B409 Transcriptional regulator, LysR family n=8 Tax=R... 73 1e-11 UniRef50_Q7ME88 Transcriptional regulator n=60 Tax=Vibrionales R... 73 1e-11 UniRef50_A6CVI9 Transcriptional regulator, LysR-family protein n... 72 2e-11 UniRef50_C4ZFB9 Transcriptional regulator GltC n=13 Tax=Firmicut... 72 2e-11 UniRef50_Q7MDM8 Transcriptional regulator n=47 Tax=Vibrionales R... 72 2e-11 UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomona... 72 2e-11 UniRef50_A8DVY1 Predicted protein n=1 Tax=Nematostella vectensis... 72 2e-11 UniRef50_A1S9J5 Transcriptional regulator, LysR family n=1 Tax=S... 72 2e-11 UniRef50_C1DBU0 Probable transcriptional regulator, LysR family ... 72 2e-11 UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=M... 72 3e-11 UniRef50_Q15RK7 Transcriptional regulator, LysR family n=1 Tax=P... 72 3e-11 UniRef50_B6WYC5 Putative uncharacterized protein n=1 Tax=Desulfo... 72 3e-11 UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=... 72 3e-11 UniRef50_B9JLE1 Transcriptional regulator protein n=1 Tax=Agroba... 71 4e-11 UniRef50_D1RNI7 Transcriptional regulatory protein n=1 Tax=Serra... 71 4e-11 UniRef50_B6EJZ0 HTH-type transcriptional regulator, LysR family ... 71 4e-11 UniRef50_B2I2G0 Transcriptional regulator n=17 Tax=Acinetobacter... 71 4e-11 UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=g... 71 5e-11 UniRef50_C0A4Z9 Transcriptional regulator, LysR family n=1 Tax=O... 71 5e-11 UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiot... 71 5e-11 UniRef50_A6GB77 Putative Transcriptional regulator, LysR family ... 71 6e-11 UniRef50_A3X3Y5 Transcriptional regulator, LysR family protein n... 70 6e-11 UniRef50_B9XKJ1 Transcriptional regulator, LysR family n=1 Tax=b... 70 6e-11 UniRef50_Q2CC44 Transcriptional regulator n=1 Tax=Oceanicola gra... 70 8e-11 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 70 8e-11 UniRef50_B5FDF2 Transcriptional regulator, LysR family n=20 Tax=... 70 8e-11 UniRef50_B6FJI6 Putative uncharacterized protein n=1 Tax=Clostri... 70 9e-11 UniRef50_Q3ICA3 Putative Transcriptional regulator, LysR family ... 70 1e-10 UniRef50_Q0B6H7 Transcriptional regulator, LysR family n=15 Tax=... 70 1e-10 UniRef50_A6B821 Transcription regulator, LysR family n=2 Tax=Vib... 70 1e-10 UniRef50_B0T6G9 Transcriptional regulator, LysR family n=2 Tax=C... 70 1e-10 UniRef50_B9YAT6 Putative uncharacterized protein n=1 Tax=Holdema... 70 1e-10 UniRef50_A1TIL9 Transcriptional regulator, LysR family n=15 Tax=... 70 1e-10 UniRef50_A9IDV2 Transcriptional regulator, LysR-family n=3 Tax=P... 69 1e-10 UniRef50_Q4K6W0 Transcriptional regulator, LysR family n=14 Tax=... 69 1e-10 UniRef50_B8IXI4 Transcriptional regulator, LysR family n=1 Tax=M... 69 1e-10 UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=B... 69 2e-10 UniRef50_Q0F3Q1 Putative transcriptional regulator n=1 Tax=Marip... 69 2e-10 UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=... 69 2e-10 UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=C... 69 2e-10 UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lenti... 69 2e-10 UniRef50_A0KBS2 Transcriptional regulator, LysR family n=5 Tax=B... 69 2e-10 UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=P... 69 2e-10 UniRef50_A3WIM0 LysR-family transcriptional regulator n=1 Tax=Id... 69 2e-10 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 69 2e-10 UniRef50_C9NPQ3 Transcriptional regulator LysR family n=1 Tax=Vi... 69 2e-10 UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=V... 69 2e-10 UniRef50_C3JZ35 Putative LysR-family transcriptional regulatory ... 69 3e-10 UniRef50_A3M2Y7 Transcriptional regulator n=8 Tax=Acinetobacter ... 69 3e-10 UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma... 69 3e-10 UniRef50_B5WQC5 Transcriptional regulator, LysR family n=1 Tax=B... 69 3e-10 UniRef50_B4SLV6 Transcriptional regulator, LysR family n=3 Tax=S... 69 3e-10 UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gamm... 69 3e-10 UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=C... 69 3e-10 UniRef50_Q13N87 Transcriptional regulator, LysR family n=9 Tax=P... 68 3e-10 UniRef50_B4SML6 Transcriptional regulator, LysR family n=3 Tax=S... 68 3e-10 UniRef50_B6R986 Transcriptional regulator, LysR family, putative... 68 3e-10 UniRef50_B8IMI0 Transcriptional regulator, LysR family n=23 Tax=... 68 3e-10 UniRef50_A6FA48 Putative transcriptional regulator with periplas... 68 3e-10 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 68 3e-10 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 68 3e-10 UniRef50_A8SN43 Putative uncharacterized protein n=1 Tax=Parvimo... 68 3e-10 UniRef50_Q6MPF3 Transcriptional regulator, LysR family n=3 Tax=P... 68 3e-10 UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marin... 68 3e-10 UniRef50_Q1D138 Transcriptional regulator, LysR family n=1 Tax=M... 68 4e-10 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 68 4e-10 UniRef50_O66882 Transcriptional regulator (LysR family) n=1 Tax=... 68 4e-10 UniRef50_A8TW95 Transcriptional regulatory protein n=1 Tax=alpha... 68 4e-10 UniRef50_A8FSN0 Transcriptional regulator, LysR family n=2 Tax=G... 68 4e-10 UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clos... 68 4e-10 UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Kl... 68 4e-10 UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=M... 68 4e-10 UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=V... 68 4e-10 UniRef50_B5EV58 Transcriptional regulator, LysR family n=2 Tax=V... 68 4e-10 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 68 5e-10 UniRef50_Q13FG1 Transcriptional regulator, LysR family n=1 Tax=B... 68 5e-10 UniRef50_Q01ZX8 Transcriptional regulator, LysR family n=1 Tax=C... 68 5e-10 UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acine... 68 5e-10 UniRef50_C3RPN8 Transcriptional regulator n=2 Tax=Bacteria RepID... 68 5e-10 UniRef50_Q97DR3 Transcriptional regulators, LysR family n=1 Tax=... 68 5e-10 UniRef50_D0BX34 LysR family transcriptional regulator n=1 Tax=Ac... 68 5e-10 UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=R... 67 5e-10 UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=P... 67 6e-10 UniRef50_A2WII2 Transcriptional regulator n=4 Tax=Proteobacteria... 67 6e-10 UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=... 67 6e-10 UniRef50_A3RXY4 Transcriptional regulators, LysR family n=5 Tax=... 67 6e-10 UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobac... 67 6e-10 UniRef50_A6VZK8 Transcriptional regulator, LysR family n=1 Tax=M... 67 6e-10 UniRef50_Q1ZUI2 Transcriptional regulator n=1 Tax=Photobacterium... 67 6e-10 UniRef50_C4LFL0 Transcriptional regulator, LysR family n=15 Tax=... 67 7e-10 UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium c... 67 7e-10 UniRef50_Q1GLV6 Transcriptional regulator, LysR family n=8 Tax=A... 67 7e-10 UniRef50_B0T518 Transcriptional regulator, LysR family n=1 Tax=C... 67 7e-10 UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales... 67 7e-10 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 67 7e-10 UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia inte... 67 7e-10 UniRef50_Q1LGP6 Transcriptional regulator, LysR family n=5 Tax=c... 67 7e-10 UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax... 67 7e-10 UniRef50_Q71X77 Transcriptional regulator, LysR family n=18 Tax=... 67 7e-10 UniRef50_A6VPT8 Transcriptional regulator, LysR family n=1 Tax=A... 67 7e-10 UniRef50_D0KM97 Transcriptional regulator, LysR family n=1 Tax=P... 67 7e-10 UniRef50_P55181 Uncharacterized HTH-type transcriptional regulat... 67 7e-10 UniRef50_A8S6Q7 Putative uncharacterized protein n=1 Tax=Faecali... 67 7e-10 UniRef50_Q2SFE9 Transcriptional regulator n=1 Tax=Hahella chejue... 67 8e-10 UniRef50_A7N2E7 Putative uncharacterized protein n=2 Tax=Vibrio ... 67 8e-10 UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=D... 67 8e-10 UniRef50_A0KP44 Transcriptional regulator n=1 Tax=Aeromonas hydr... 67 8e-10 UniRef50_B4WPG8 LysR substrate binding domain protein n=1 Tax=Sy... 67 8e-10 UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=C... 67 8e-10 UniRef50_Q57748 Uncharacterized HTH-type transcriptional regulat... 67 9e-10 UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=... 67 9e-10 UniRef50_Q9CNM4 HpkR n=1 Tax=Pasteurella multocida RepID=Q9CNM4_... 67 1e-09 UniRef50_A6VPW4 Transcriptional regulator, LysR family n=1 Tax=A... 67 1e-09 UniRef50_D2R1A9 Transcriptional regulator, LysR family n=1 Tax=P... 67 1e-09 UniRef50_A6VR99 Transcriptional regulator, LysR family n=3 Tax=G... 67 1e-09 UniRef50_C4IH67 Transcriptional regulator n=3 Tax=Clostridium Re... 67 1e-09 UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=P... 67 1e-09 UniRef50_Q7NSX8 Probable transcriptional regulator, LysR family ... 67 1e-09 UniRef50_B2HVM7 Transcriptional regulator n=21 Tax=Moraxellaceae... 67 1e-09 UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus ... 66 1e-09 UniRef50_B7KPE2 Transcriptional regulator, LysR family n=26 Tax=... 66 1e-09 UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewane... 66 1e-09 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 66 1e-09 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 66 1e-09 >UniRef50_P77700 Uncharacterized HTH-type transcriptional regulator yahB n=52 Tax=Bacteria RepID=YAHB_ECOLI Length = 310 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/310 (100%), Positives = 310/310 (100%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE Sbjct: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK Sbjct: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH Sbjct: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG Sbjct: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG Sbjct: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 Query: 301 IYQDLLHREN 310 IYQDLLHREN Sbjct: 301 IYQDLLHREN 310 >UniRef50_UPI000197C658 DNA-binding transcriptional activator AllS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C658 Length = 308 Score = 219 bits (558), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 111/289 (38%), Positives = 170/289 (58%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +E + F T A+ SFS+AA++L +T+ ISY IK +E + V LFTR+TR++ LT Sbjct: 1 MLDQETMTTFITVAQCQSFSQAAKQLYKSTATISYRIKILEEYVGVQLFTRTTRTVNLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G Y + N + ++ I++G+E + I IN LLY P A LLQ L ++FP Sbjct: 61 AGEYLLEHCREWHNWLSNMPNQLRLINEGVEQEITIAINNLLYEPNAVADLLQHLTERFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ +T +VY GVWDA+++N+ +IAIG P + ++ +G I W FA+A HPLA Sbjct: 121 FTRLNITRQVYMGVWDALLSNKCDIAIGVPGSESLDSDMNTLFLGKIDWVFAVANQHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + +++ QLR YP I VEDT+ ++K+ WLL GQ I VPD TK C + G GIGF Sbjct: 181 SIDGILSDEQLRCYPTINVEDTSQVLSKRTAWLLSGQREIKVPDMKTKVLCHLKGTGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 LP + + + L+ + I PR+ S + LA + G+V + + K F Sbjct: 241 LPASICKPYIQNQQLIEKSIKRPRRPSPLSLAWNSNQQGEVLKTVVKLF 289 >UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax=Enterobacteriaceae RepID=ALLS_ECOK1 Length = 308 Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 110/283 (38%), Positives = 163/283 (57%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F E L F A GSFSKAAE L TT+ ISY IK +E V LF R+TRS+ LT Sbjct: 1 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + +A D L ++ + ++ G+E +V I IN LLY P+ ARLL L +++P Sbjct: 61 AGEHLLCQARDWLGWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVARLLAWLNERYP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q ++ ++Y GVWD+++ ++AIG T +G+++W F +A DHPLA Sbjct: 121 FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 V EP+ E+QLR +P + +ED+A T+ K+V W L GQ+ I+VPD TK + G GIGF Sbjct: 181 NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQ 286 LP + + + LV+R I R S + LA + +G+ + Sbjct: 241 LPKSLCQSMLDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVE 283 >UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D757_LARHH Length = 303 Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 109/281 (38%), Positives = 159/281 (56%), Gaps = 1/281 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 I E L T AR+ SFS AAE L SAISYT++++E + LF R + +ELT Sbjct: 2 IIQTEALRVVETVARYRSFSAAAERLHKVPSAISYTVRKLEETIGTQLFLREGKQVELTA 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GRYF A D+L D ++ I + G+E + R+ +N LL P A L L ++F Sbjct: 62 EGRYFLEHARDILRDLETLQADITQLHGGVEQQFRVGLNNLL-NPAPLAGLAADLHQRFT 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 C+ + TEVYNGVWDA+I+ + ++AIGAP+ L G + Y +G + W F I+P HPLA Sbjct: 121 ACRQSYRTEVYNGVWDALIDRRIDLAIGAPNVLPQGADLSYLPMGEVHWDFVISPQHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P+ +L +P I V DTA ++KK WL+ GQ+ I PD K Q I G GIGF Sbjct: 181 RSHSPLDSRELAAFPAISVMDTAMGLSKKEAWLVKGQKVIYAPDTAAKLQFLIAGVGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV 284 +P ++ A+ + L+ R + +P+ + ++ A Q G+V Sbjct: 241 MPRHLCAYAVRKGQLLQRPVVDPKPPTPIMAAWQTRNQGKV 281 >UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5U3_LARHH Length = 317 Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 99/301 (32%), Positives = 151/301 (50%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F AR GSFS AAE L T +AISY I+ +E + LF R+TRS+ LT +G Sbjct: 12 EALKTFMEVARQGSFSAAAERLNKTPAAISYRIRALEDNMGTPLFERTTRSVTLTPAGEL 71 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 + T + + + ++ G+E R + IN LL+ + RLL L + F Sbjct: 72 LLERGTQIFEWMQHLPEELQQVNDGVEPRFHLVINNLLFNAEAVGRLLATLSRSFSHTAF 131 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 V VY GVWD ++ + AIG P + +G I W ++P HPLA + + Sbjct: 132 RVRRAVYMGVWDEMVYGSGHFAIGIPGWHPISDAFETLPLGQIEWVLVMSPAHPLAGIQQ 191 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDY 247 P+ LR YP + VEDT+ ++K+ WLL GQ +LVP K + G G+GFLP Sbjct: 192 PLTNDLLRQYPAVNVEDTSERLSKRTAWLLPGQHEVLVPSLRAKIAAHVHGLGVGFLPRS 251 Query: 248 MVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDLLH 307 + + + LV +Q+ + R S M LA + +G++ +++ FA L + + + Sbjct: 252 IAEQYVRTRQLVIKQVRHGRTPSPMALAWRREDSGRIGAYLQALFAAEDPLVSPFLNKIQ 311 Query: 308 R 308 R Sbjct: 312 R 312 >UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=Gammaproteobacteria RepID=A8GDV5_SERP5 Length = 314 Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 89/285 (31%), Positives = 157/285 (55%), Gaps = 1/285 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLDVVDAVARTGSFSAAAHELHRVPSAVSYTVRQLEQWLAVPLFERRHRDVELTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F ++A ++ +R+ ++ G +++I ++ ++ P+ +L+ + FP Sbjct: 61 AGVVFVQEARSVIKKMLDTRRQCQQVANGWRGQLKIAVD-IIVKPQRCRQLVLDFYRHFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+++ +A++AIGA + GGG + ++G +RW ++P HPLA Sbjct: 120 DVELMVQPEVFNGVWDALVDGRADMAIGATRAVPVGGGFAFRDMGDMRWLCVVSPQHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + QLR +P++ +EDT+ + K+V W L Q ++VPD+ + C G +G Sbjct: 180 MMDGLLNDEQLRPFPSLCLEDTSRNLPKRVTWTLDNQRRLVVPDWASALDCLCAGLCVGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 +P + + + LV Q+ P S L Q + W+ Sbjct: 240 MPAHQALPLVQRGELVALQLQQPFPASPCCLTWQQNTPSPAMAWL 284 >UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z3S8_PHOPR Length = 300 Score = 180 bits (456), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 97/283 (34%), Positives = 154/283 (54%), Gaps = 1/283 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++++L A GSF+ AAE L SA+SYT+K+ME L LF R+ R ++LT + Sbjct: 3 LSKKSLKTIHVIAHSGSFAVAAERLNRVPSAVSYTVKKMEEELGFSLFDRTGRQVKLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+YF ++ +L+ + + R IS G++ I IN ++ + L+ L +QFP+ Sbjct: 63 GKYFIDQSQWMLDSYEELVRNTAMISSGVDVSFSIAINNII-NREDLIPLIGKLNQQFPS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 QI+V TEVYNG WDA+ +A++ IGAP + GI Y IG I W F +A HPLA Sbjct: 122 TQISVKTEVYNGCWDALYGRRADLVIGAPHSAPKMEGIVYHSIGNIDWDFIVAQTHPLAS 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +LR YP I+V+DT+ I+ + W L GQ+ I P+ T + G GIG+ Sbjct: 182 QVSALTAEELRYYPVIVVKDTSQHISPQDTWSLTGQKIIYAPELTTAIKMIEHGIGIGYA 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 P + ++ + Q ++ + I +Q +++ A + V W Sbjct: 242 PHHRIKGKLDQGTILKKAIIEHKQPTQLFYAWHANRESPVLNW 284 >UniRef50_Q2TTU9 Transcriptional regulator n=17 Tax=Escherichia RepID=Q2TTU9_ECOLX Length = 296 Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 92/282 (32%), Positives = 145/282 (51%), Gaps = 1/282 (0%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 ++E + AR + + AAE+L S ISYT+K+ E L V LF R R IEL+ +G Sbjct: 4 SDETIRIIHLVARHQNITTAAEQLNKVPSTISYTLKKAEETLGVELFIRKGRYIELSPAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 YF + ++L D A+KR I GIE + I +N ++ +Q ++QF + Sbjct: 64 SYFIEHSKNILRDLDALKRNTVLIHDGIERELTIAVNNII-PGDFLVSFIQDFERQFTST 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +TV EVYNG WDA+ + +A++ GAP + GI +G I W F ++P HPLA Sbjct: 123 TLTVDIEVYNGCWDALYSKRADLVYGAPHAVPSSEGIISEPVGQIEWDFVVSPLHPLAVK 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 P+ S+LR YP + + DT+ WLL GQ+ I VPDF GIG++P Sbjct: 183 RNPLENSELRHYPAVCIRDTSVNFPPMQAWLLEGQKPIFVPDFAMAISLIEQNVGIGYIP 242 Query: 246 DYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 ++ + + L+ + + + +++ LA + G+ W Sbjct: 243 HHLALPLLNRGKLLKKPMREHKHATKLFLAARSDGIGKACLW 284 >UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulator ydhB n=131 Tax=Proteobacteria RepID=YDHB_ECO57 Length = 310 Score = 177 bits (448), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 86/285 (30%), Positives = 157/285 (55%), Gaps = 1/285 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA+EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +F ++ ++ +++ I+ G ++ I ++ ++ P+ T +++ + F Sbjct: 61 AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV-RPERTRQMIVDFYRHFD 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+ + + +AIGA + GG + ++G + W+ +A HPLA Sbjct: 120 DVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + P ++ LR +P+++ EDT+ T+ K++ WLL Q+ ++VPD+ + C G IG Sbjct: 180 LMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 +P + + + + V ++ NP DS L Q + W+ Sbjct: 240 VPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWL 284 >UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1H085_METFK Length = 300 Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 100/297 (33%), Positives = 161/297 (54%), Gaps = 3/297 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + E L R GSFS AAE L SAI+YTI+ +E LD+ LF RS + Sbjct: 1 MSIRLSIEALEVLDAIDREGSFSAAAESLHRVPSAITYTIRTLEDDLDIKLFDRSGHKAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G R+ LL ++RR+ ++ GIE +RI I+ LL L + ++ Sbjct: 61 LTAAGLELLREGRHLLKAAGELERRVRRVATGIETDIRIAISDLLRLEPLYDILDRFYRQ 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 F T ++ + EVY G WDA+I+N+A+I+IGAP GGG +G + + FAIAP H Sbjct: 121 AFGT-RVYLQREVYGGSWDALISNRADISIGAPGEGPSGGGYTTRLLGTLEFVFAIAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA +PEP++ ++ + +I D++ + K +L GQ+ + VPD +K QI G G Sbjct: 180 PLADLPEPLSNHDIQQHRSISAADSSRHLPPKTSGILDGQDVLSVPDIPSKALAQIKGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 +G+LP + + L+ R++ P+ + +A + + G+ QW+ ++ G+ Sbjct: 240 VGYLPRKLAEYHAARGELLIREVAEPKPEVVAYVAWR--SGGKAQQWLLQELQKVGM 294 >UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUP2_METML Length = 304 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 89/292 (30%), Positives = 159/292 (54%), Gaps = 2/292 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ + E+L AR GSF+ AAE L SAI+YT++++E L+V LF RS E Sbjct: 1 MSTKLSLESLEVLDAIARKGSFAAAAESLFRVPSAITYTVRKLEEDLNVQLFNRSGHRAE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G ++ +LLN ++ R+ +++G+E + I +N L + L + + Sbjct: 61 LTLAGAELLKEGRNLLNAANELESRVKRVAKGVETELTIAVNDLFDITRIYPILDKFYNQ 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 F T +I +T EV+ G WDA+I+ +A+I +G P G IG + +++A+AP H Sbjct: 121 NFGT-RIKLTQEVFGGGWDALISGRADITLGCPGDTPPVSGFTTKPIGLVEFSYAVAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + +P+ + + + I D++ + + +L GQ+ + +P+ + K Q Q+ G G Sbjct: 180 PLAKIADPLQDEDIIRHRAISSADSSRNLPPRTAGILSGQDVLTLPNMHFKLQAQLAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G++P + ++ L+ +Q+ P+ + LLA ++ G+ QW KQF Sbjct: 240 AGYMPTKIAEHYASKGQLIIKQVAKPKHEVMGLLAWRNDG-GKAQQWFIKQF 290 >UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=Comamonadaceae RepID=A1TRK9_ACIAC Length = 315 Score = 157 bits (397), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 89/291 (30%), Positives = 151/291 (51%), Gaps = 5/291 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T ++L A GSF+ AA +LG+ SA++Y ++++E LDV+LF RS R TE+ Sbjct: 11 LTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPTEA 70 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G R+ LL + A+ R+ ++ G E ++ I ++ ++ +P L++ Q P Sbjct: 71 GSELLREGARLLEEVEAVAHRVRRVATGWEPQLTIAVDGVI-SPTTLLELVEAFYAQSPP 129 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + ++ G +A+ + +A++A+G + G+ IG + + F +AP HPLA Sbjct: 130 TRLKLRDDILTGTLEALTSGRADLALGVAVNATNASGVQGKVIGDLLFLFTVAPHHPLAT 189 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P P+ ++ LR + I V D+A +G LL GQ+ V TK Q Q+ G G GFL Sbjct: 190 APGPLTDTVLRQHRAIAVADSAQHGGVTMG-LLGGQDVFTVDSMQTKLQAQLRGLGAGFL 248 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLA---TQHSATGQVTQWIKKQF 292 P+ MVR + LV R++ P + R+ A H+ G+ W +Q Sbjct: 249 PEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQL 299 >UniRef50_D0WIW9 HTH-type transcriptional activator AllS n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIW9_9ACTN Length = 323 Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 91/284 (32%), Positives = 139/284 (48%), Gaps = 3/284 (1%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F GS + AA L T SA+SY IK +E L + L R+T +I T +G+ Sbjct: 12 EALQTFLLVIEEGSLTAAASALYKTPSAVSYRIKALEESLGIQLLERTTHAIAPTTAGKR 71 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 KA DLL +D I GIE + +N LLY A+LL L ++F + + Sbjct: 72 LAAKAQDLLEFHRGFYDELDAIKTGIEPSFTLVVNNLLYDGVAVAKLLAHLSEKFGSAAL 131 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 V V+ GVWD +++ + AIGAP T +G + W +P+HP+ Sbjct: 132 NVQKSVFTGVWDYMVHEGGSFAIGAPSHHSIDERFVTTPLGLVEWVLVCSPNHPILRTGI 191 Query: 188 PIAESQLRLYPNIMVEDTA-HTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 + ++ +P + ++DT+ H+I + W L GQE I+VPD TK C ++G GIGFLP Sbjct: 192 EVDGDSIKQHPVVNIQDTSTHSIGRP-AWRLEGQEEIIVPDLETKIHCHVMGLGIGFLPK 250 Query: 247 YMV-REAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIK 289 + R + L RQ S M A + + G++ +++ Sbjct: 251 PIADRWIAAKKLRALSAKDIMRQPSPMSYARKKNDDGRIGNYLE 294 >UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=Gammaproteobacteria RepID=A0KUI9_SHESA Length = 320 Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 87/295 (29%), Positives = 150/295 (50%), Gaps = 8/295 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + + L+ + GSFS AAE L SA++YT++++E+ L V LF R + E Sbjct: 24 MLPVMSLDGLIVLDAIDKKGSFSAAAESLFRVPSALTYTVQKLESDLGVKLFERKGQRAE 83 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQL---LYTPKHTARLLQV 117 LT G+ R+ ++L ++ + + G E+ + + I+ + L K A ++ Sbjct: 84 LTLVGQLVLRQGREILAATARLEEAVRQLETGWESALTLAIDTVVPDLPLLKLIAEFTEL 143 Query: 118 LKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIA 177 K+ I +T E G WDA+ + +A+IAIG L G EIG + + FA+A Sbjct: 144 GKQ----VTINITEESLGGGWDALYSGRADIAIGVTGEL-PKGQYHLVEIGMLEFVFALA 198 Query: 178 PDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P HPLA PI L +P+++V D++ + ++ L ++ I VP+ TK + Q L Sbjct: 199 PHHPLAQFDHPIPTEALLQFPSVVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQL 258 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G G+G+LP +++RE + LV ++ PR + LA + G+ W ++ Sbjct: 259 GLGVGYLPKHLIREELASGALVACKVEIPRPAQPVFLAWRKGNQGKAQAWFAERL 313 >UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=Marinobacter RepID=A1TYX9_MARAV Length = 306 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 1/299 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + L R GSF+ AA EL SAISYT++++E L+V +F R+ Sbjct: 1 MHTAITIDALKVLDAIDRKGSFAGAAGELFRVPSAISYTVQKLEEDLNVSIFDRTGHKAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GRY + LL + ++QG E R+RI N LL + + Sbjct: 61 LTPAGRYLLEEGRSLLEAAENLAHTTRQVAQGWETRLRIGFNSLLPAQCLFPAIDAFYQL 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P + V EV+ G WDA+ + + ++ IGA G +G I + FA+A H Sbjct: 121 GVP-VDVQVVEEVFAGAWDALQSRRVDMVIGADQLSKPAGSFTTKPLGEIPFVFAVAASH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA EP+ ES + +P + DT+ + + Q ++ V + + K Q G G Sbjct: 180 PLAQAEEPLTESDIAPFPAAVAADTSRALPPGHAGIFRRQRTLTVTNIDQKIAIQEAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILT 299 +G+LP +REA+ LVT+ +H PR + LA G+ W + + + L+ Sbjct: 240 VGWLPLPRIREALAAGRLVTKAVHEPRPPIAIHLARHSEDKGKALMWFWNRLSEDQSLS 298 >UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IM2_DECAR Length = 303 Score = 144 bits (363), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 8/300 (2%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 LL R GSF+ AA L SA+S+ I ++E L LF R R L E+G Sbjct: 8 LLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEAGHTLL 67 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP---TCQ 126 LL ++RR+ I+QG EA +RI I+ ++ R+ +L++ + + Q Sbjct: 68 EDGRHLLRSASELERRVQRIAQGWEAELRIAIDTIIPV----ERIYPMLERFYAAGHSTQ 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEI-GAIRWAFAIAPDHPLAFV 185 + ++ EV G WDA+ ++A++ IGA + GI + ++ FAIAP HPLA Sbjct: 124 LRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIATRLLCRHSQFVFAIAPSHPLAAW 183 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 EPI S+L + I + DT+ + + L+ GQ+ + VPD K Q+ G GIG LP Sbjct: 184 TEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIGHLP 243 Query: 246 DYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQDL 305 ++ + LV + + +PR + LA + +G+ W A + + Q L Sbjct: 244 RWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQGL 303 >UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bordetella RepID=Q2L0D3_BORA1 Length = 316 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 90/288 (31%), Positives = 142/288 (49%), Gaps = 10/288 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E LL AR GSF++AA ELG SA++Y ++++E LD +LF RS +LT + Sbjct: 14 ITPELLLMVDAIARHGSFARAARELGKVPSAVTYAVRKLEDSLDALLFDRSGHRAQLTPA 73 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ R LL+ + R+ I+ G E +RI I+ +L L L + F Sbjct: 74 GQMLLRDGRHLLHSLDDLACRVKRIATGWEVELRIAISAVLPIEP-----LFDLMRDFQA 128 Query: 125 CQ----ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q + ++ EV G WDA+ +A++ IGA + GG +G ++ F +AP H Sbjct: 129 LQSGTSLRLSEEVLGGAWDALAAGRADLIIGADASGAPSGGYRSVAMGQTQFGFCVAPQH 188 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + + E + Y I+V DT+ + + LL ++ +++P+ K + QI G G Sbjct: 189 PLARLGRALTEQDIAQYTAIVVADTSRDLPPRSRGLLPTRDIMVMPNMRAKIEAQIRGLG 248 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQW 287 G LP +A+T+ LV N P ++L A + GQ W Sbjct: 249 CGHLPLTRAAKAITEGQLVVCATENLPPPTEQVLYAWRPEHPGQALNW 296 >UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=Burkholderiales RepID=Q1LK69_RALME Length = 342 Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 82/287 (28%), Positives = 144/287 (50%), Gaps = 1/287 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 +N + E+L R GSF+ AA E+G SA++Y ++++E LDV+LF R E Sbjct: 30 LNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDRRRHRAE 89 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + LL ++RRI ++ G EA + I ++ L+ + ++Q Sbjct: 90 LTPAGRALLDEGRHLLRAADDLERRIKRLATGWEASLNITVDDLVNF-RALLPVIQDFYA 148 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + ++ + EV G WDA+++N+A++ IG G +GA+ + FA+A H Sbjct: 149 ENTATRLRFSKEVLGGAWDALVSNRADLIIGGAYEAPSTQGFQVRALGAMPFVFAVAAHH 208 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA V P+ ++ + + V DT+ + + +L GQ+ ++VP K + QI G G Sbjct: 209 PLAAVEGPLTTIEIAKHRIVAVGDTSRNLPARTHGVLAGQDVLVVPTMRDKLEAQIRGLG 268 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 G+LP + + + +L R+ R +A + + G+ QW Sbjct: 269 CGWLPAPLAQPHIESGVLQARETVEVRAPGNFKVAWRTNTRGKALQW 315 >UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=Vibrionales RepID=A5F463_VIBC3 Length = 302 Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 75/285 (26%), Positives = 149/285 (52%), Gaps = 2/285 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F++ +L AR GSF+ AAE L SAISY+++++E+ L VVLF R R +ELT Sbjct: 2 MFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTP 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F +A LL I+ + + G +++ ++ ++ K +++ + F Sbjct: 62 AGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDKMKP-MVEAFYQTFD 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV+NG W+AI +A+I IGA + GG + ++G + WAF ++P+HP Sbjct: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHP-C 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + ++E + + I ++DT+ + K+ Q +L+P++ + + G G+G+ Sbjct: 180 VREQNLSEEFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 +P +M + + LV + + + + S L + ++ +W+ Sbjct: 240 MPRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWM 284 >UniRef50_A6GPV4 Probable transcriptional regulator transcription regulator protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPV4_9BURK Length = 303 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 4/277 (1%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GSF+ AA L SAI+Y ++++E LDV+++ RS +LT +G+ + LL Sbjct: 18 GSFAAAAVALNKAPSAITYQLRQLEESLDVLIYDRSGHKAKLTPAGKALLEEGRKLLEST 77 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 A+ +R+ ++ G EA +RI ++ ++ K + + PT ++ ++EV +G W+ Sbjct: 78 DALTKRVKAVASGWEAELRIVLDSVVPFEKAIPWIQAFDALESPT-RLRFSSEVLSGTWE 136 Query: 140 AIINNQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRL 196 A+ + +A++ IG+ + G+ G + FA+APDHPLA EP+ +R Sbjct: 137 ALYSGRADLLIGSRLDQNQFASATGLHIQSFGQSLFVFAVAPDHPLAHAEEPLCIDTIRQ 196 Query: 197 YPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQS 256 Y + V DT+ L GQ + VP+ TK + Q+ G G G+LP ++ + Sbjct: 197 YRAVAVGDTSRNFKPLTFGLQSGQAVLTVPNLQTKVKAQLAGLGCGWLPWNLIEHEVANG 256 Query: 257 LLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 L+ ++ + + S + A Q + G+ W K A Sbjct: 257 DLLIKKTEDVTRQSSLCFAWQRGSQGKALDWWTKHLA 293 >UniRef50_P76369 Uncharacterized HTH-type transcriptional regulator yeeY n=105 Tax=Enterobacteriaceae RepID=YEEY_ECOLI Length = 309 Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 1/293 (0%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L+ + GSF+ A+ +L T SA+SYT+ ++E+ L++ L RS + T +G+ Sbjct: 8 LMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGKMLL 67 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 K ++L+ ++++ + +G E + I ++ + A L++ + ++ Sbjct: 68 EKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT-FPFSLLAPLIEAFYQHHSVTRLKF 126 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 V G WDA+ +A+I +GA ++ +G + FA+AP HPLA EP+ Sbjct: 127 INGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEEEPL 186 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 ++ Y I+V DTA LL QE+I V DF TK + QI G G G+LP Y+ Sbjct: 187 NRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPRYLA 246 Query: 250 REAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 + + L+ +++ + + G + W + + N + G+Y Sbjct: 247 QRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVY 299 >UniRef50_Q7NS01 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NS01_CHRVO Length = 299 Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 85/286 (29%), Positives = 133/286 (46%), Gaps = 6/286 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L + GSF+ AAE L SA++YT++++E GL V ++ RS LT + Sbjct: 3 LTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL+ ++ R+ +QG E R+RI + L+ + + + Q T Sbjct: 63 GERLLKDGRHLLDAARQLELRVSKQAQGWEDRLRIVVGDLVGFEQLLPSIADFDRLQSDT 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDY--TEIGAIRWAFAIAPDHPL 182 ++ E + G+WDA+ +++A++ IGAP+ G DY IG + A HPL Sbjct: 123 -RLHFIRESFGGIWDALYDDRADLVIGAPNQPPPG---DYFTRNIGDYDFVLVAAAGHPL 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A PEP+ LR Y + V DT+ + + G LL GQ+ + V K + + G G G Sbjct: 179 AAEPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 LP VR + LV + M A + G+ QW Sbjct: 239 HLPRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWF 284 >UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZV2_9NEIS Length = 311 Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 87/284 (30%), Positives = 134/284 (47%), Gaps = 9/284 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L R GSF+ A E L S+ISY I ++E L V LF R+ +LT +G+ Sbjct: 6 EALEVLDAIDRHGSFAAAGEALFKVPSSISYMIGKLEEDLGVTLFDRTGLKAKLTPTGQA 65 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF----P 123 LL A++RR I G E+ +RI ++ +L R+L F Sbjct: 66 VLEDGRRLLRGAIALERRAKKIEAGWESELRIAVDVIL-----PFRILLPYITTFYGENS 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV G W+A+++ +A+ AIGA D + G IG ++ AFA+AP HPLA Sbjct: 121 QTRLLFSHEVSGGPWEALLDGRADFAIGALDHAPNLPGFSSCAIGQVQSAFAVAPGHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 EP+ S + Y + ++DT+ + L GQ+ +LVP+ K + + G G GF Sbjct: 181 DAVEPLDRSVIGQYRLVEIQDTSRQRLLRPLDLQIGQDFLLVPNLEAKLEAVLAGLGCGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 LP +V+ L +++ PR + A G QW Sbjct: 241 LPGCLVQHCANLGKLKVKEVKEPRPLKQFFAAWNTGDAGLGVQW 284 >UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=Burkholderiaceae RepID=Q1BN17_BURCA Length = 325 Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 142/294 (48%), Gaps = 6/294 (2%) Query: 2 NSIFTEENLLAFTTAARF-GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + + E+ LA A R GS S+AA LG S +S+ +++ET D +LF R ++ Sbjct: 18 SDLMLSEDELALLDAIRATGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRGYRLQ 77 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLY--TPKHTARLLQVL 118 LT +G+ +A L D + +R+ ++ G E R+ I +++L T R L Sbjct: 78 LTPAGQLLTDEAARLALDVARLTQRVRQVASGWEDRLWIVSDEVLEFDTLLPVVRAFDAL 137 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 + T EV G W+A+ + +A++ +GA + L G+ + E+GA+ W FA++P Sbjct: 138 DS---GVSLRFTHEVLGGTWEALRDGRADLVVGATNELPAMPGLKWFELGAMEWVFAVSP 194 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 HPLA + + + +++V D++ + LL GQ + VP K Q Sbjct: 195 RHPLAAASGVLTRDAIGAHRSVVVADSSRRAAGRAYGLLGGQAVLAVPSMRAKILAQRDA 254 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G+G++P V + + LV + +PR+ + + +A G+ QW +Q Sbjct: 255 LGVGWVPRRRVASLLARGELVEKPTADPREPNLLYVAWHGDRDGRALQWWLEQL 308 >UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=B1Y0I3_LEPCP Length = 332 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 85/314 (27%), Positives = 140/314 (44%), Gaps = 33/314 (10%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L T AR GSF+ AA ELG SA++Y+++++E LD +LF R +R +LT + Sbjct: 8 LTPEALEMMDTIARTGSFAAAARELGKVPSALTYSVRQLEEALDALLFDRRSRQAQLTPA 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF-- 122 G R+ LL + R+ ++ G E + I ++ ++ A L ++ F Sbjct: 68 GDELLREGRRLLQQIDTVANRVQRVANGWETELAIAVDNIVAP----AALFDLIDAFFTL 123 Query: 123 --------------------PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG- 161 P ++ + EV G W+A++ QA++AIG L G Sbjct: 124 PSGVGDDTVATGQTASGHRGPPTRLKLLDEVMAGTWEALVTGQADLAIG---VTLPGAAF 180 Query: 162 --IDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG 219 I +G +R A+AP HPLA P+ + + + + D+A + + G Sbjct: 181 EDIQTAVLGPLRMVMAVAPHHPLAREAAPLCSDTIARHRIVAIADSAKRHDPITVGVQAG 240 Query: 220 QESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 Q+ + VP K + Q+ G G G LP+ +VR LV + P ++ + A + S Sbjct: 241 QDVLTVPSVAAKLEAQLRGLGCGRLPENLVRRHAEAGRLVVLETEEPPREIELHYAWRRS 300 Query: 280 AT-GQVTQWIKKQF 292 A G+ W Q Sbjct: 301 AAQGRALGWWLSQL 314 >UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=Burkholderia RepID=B2TAV1_BURPP Length = 359 Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 80/303 (26%), Positives = 146/303 (48%), Gaps = 3/303 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN F E L R G+F+ AAE L S++SY ++++E L V LF R+ R Sbjct: 54 MNLSF--EVLQVLDAIDRTGTFASAAETLHKVPSSLSYLVQKLELDLGVKLFDRTGRRAT 111 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + LL A++ + I G E+ + + +++++ + + K Sbjct: 112 LTHAGRVVVEEGRRLLEAAEALEFKAKRIEHGWESELHVAVDEIIPFDLLWHHVGEFYKL 171 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + T ++ ++ EV G WDA++ +A++ +GA + IG+++ F +APDH Sbjct: 172 KLDT-RLHLSKEVLGGSWDALLTRRADLIVGAAGDPPPIPNLIARPIGSLKHVFVVAPDH 230 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA +P P+ + + + + DT+ + + L QE + VP K QI G Sbjct: 231 PLASIPGPLTMDMVARHRAVAIGDTSRKLAPRTIALAVNQEVLTVPTLEAKLAAQIRGLA 290 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 G +P+ + +A++Q LV +++ R + LA + +G+ QW Q ++ Sbjct: 291 AGTIPECLAVDALSQGELVQKEVIGMRDVTHFYLAWRDDESGKALQWWVDQLDRPNLIDE 350 Query: 301 IYQ 303 + Q Sbjct: 351 VVQ 353 >UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=B5Y100_KLEP3 Length = 300 Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/297 (26%), Positives = 142/297 (47%), Gaps = 7/297 (2%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L+ R GSF+ AAE L T +A+SY I+++E+ LD+VL RS + T++GR Sbjct: 8 LMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLDIVLLDRSGHRAKFTDTGRLML 67 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 K LL+ ++++ +S G E + I ++ + L+ Q P ++ Sbjct: 68 EKGRQLLSAARDLEKQAQQLSAGWERELAIALDAS-FPFSALLPLIAEFYAQNPQTRLNF 126 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + G W+ + ++ A+I +GA + + +GA+ F +AP HPLA EP+ Sbjct: 127 SHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAPAHPLAQAKEPL 186 Query: 190 AESQLRLYPNIMVEDTA---HTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 QL + I++ D+A H +N LL Q I V DF +K + G G GFLP Sbjct: 187 TNKQLSQHRAIVIRDSARYCHPLNSN---LLDEQPQIGVDDFASKVELLCAGLGCGFLPR 243 Query: 247 YMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 ++ R + + L+ + + R+ +A + G +W ++ +L+ +Y+ Sbjct: 244 HIARPWLEKGSLMEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYR 300 >UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteria RepID=B2SUE3_XANOP Length = 314 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 11/285 (3%) Query: 18 RFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLN 77 R GSF+ AA+ L S ISYT+ ++E L V LF R T++GR R+ LL Sbjct: 16 RRGSFAAAAKVLFKVPSTISYTVAKLEEDLGVQLFERVGPKATPTQAGRELLREGRHLLR 75 Query: 78 DFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC----QITVTTEV 133 ++ R+ ++ G E+ V I ++ +L A LLQ F T ++ V +E Sbjct: 76 AAQELEVRVRRVASGWESDVAIGLDAVL-----PAALLQPQILDFYTVADSTRLRVLSES 130 Query: 134 YNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQ 193 +G W+A+++ + ++ + A + GGG IG +R+ FA+A HPLA + ++ Sbjct: 131 LSGGWEALLDRRVDLIVAAGEGP-SGGGYVAEPIGTLRFVFAVASTHPLASA-GVLGAAE 188 Query: 194 LRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAM 253 L + I V D+A + + LL G++ + VPD TK Q+ G G GFLP+ R A+ Sbjct: 189 LAEHRAIAVADSARRLLPRTVGLLSGRDVLTVPDMRTKLLLQLAGAGYGFLPEPYARGAL 248 Query: 254 TQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 L Q+ + D LA + G+ W ++ G+ Sbjct: 249 QDGRLREVQVETHKPDETFYLAWRPGEEGEALGWWRRALRSEGLF 293 >UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=A1K9S8_AZOSB Length = 306 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 12/298 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S T + L R SF+ AAE L SA+SYT+ ++E L V LF RS R Sbjct: 1 MASPITLDALRVLDAIDRKQSFAAAAEALFRVPSALSYTVSKLEEDLGVQLFDRSKRRAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLL-YTPKHTARLLQVLK 119 LT +GR + +L + R + + G E +RI ++ +L + P + L Sbjct: 61 LTPAGRLVLEQGRHILTATEELTRLVQAVGDGWEVELRIAVDSVLDFAPIYA------LV 114 Query: 120 KQFPTCQ----ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFA 175 +F T Q + ++ EV G WDA+ + ++ + GGI +G + + FA Sbjct: 115 AEFQTLQHRTELLLSEEVLGGSWDALNTGRCDL-VIGAAGEAIAGGIATRALGEVEFVFA 173 Query: 176 IAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 +A HPL + +P+A L +P ++V D++ + + LL G+ ++VP K + Q Sbjct: 174 VAAGHPLCALAQPLATEALLDFPTVVVADSSRYLPARSTGLLDGRSRVVVPSIARKIEAQ 233 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 LG G+G+LP + + + L + + +A + +A G+ +W + A Sbjct: 234 CLGLGVGYLPRHRIGAELAAGTLCELSLEKAHPPQALSIAWRSAARGKALRWFLDRLA 291 >UniRef50_A4BES5 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BES5_9GAMM Length = 307 Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 5/279 (1%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L A + GSF+ AA+ L SA++YTI+++E L++ LF RS +LT G+ Sbjct: 21 LRALDAIDKRGSFAAAAQALHKVPSALTYTIQKVEQDLNLELFDRSGHRAKLTPPGKLLL 80 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + +L D + + ++ G E + +C++ L + L++ +Q+P +I + Sbjct: 81 DQGRLILRDIDGLAQSAQKVASGWEPELTLCVDHL-FDVACLFPLVREFNRQYPFVRINL 139 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 +G W+ ++N A++ + +T G D +G FA+A DHPLA + Sbjct: 140 RQGSLSGSWEQLLNGSADLLLAPANTNPKIDGYDKKNLGEFHMTFAVAKDHPLAQTASEV 199 Query: 190 AESQLRLYPNIMVEDTAHTINKK-VGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYM 248 E + YP I+V D+ + + VGW Q +I V + + K Q G G+G+LP++ Sbjct: 200 TEDMIDDYPVIVVPDSTQMMTPQTVGWTRRTQ-TISVDNMSEKIAAQKAGLGVGYLPEHR 258 Query: 249 VREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 +R+ + S L+ ++ + L A ++ G QW Sbjct: 259 IRKELESSDLIRLRLDD--NHGIALAAWRNGEPGPALQW 295 >UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRB7_9GAMM Length = 300 Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 7/294 (2%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T E+L R GSFS AA L S I+YT+ +++ L V LF R R LT Sbjct: 4 SRITLESLEVLDAIDRKGSFSAAAASLYRVPSKITYTVNKLQDDLGVTLFVREGRRSVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLL---YTPKHTARLLQVLK 119 +G+ + +LL+ + + + +G E+R+RI ++ +L + H LQ Sbjct: 64 PAGKLLLEQGRELLDAADRLVEKTKQLERGWESRLRIALDTVLDSDFLLPH----LQAFC 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 + P ++ + +EV G W+A+ ++A++ + A + + G++ I I W FA+AP Sbjct: 120 DEQPDTEVDIASEVLGGTWEALQLDRADLVVAAAEASPESAGVESRPIMTIPWVFAVAPH 179 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA P++E + I+V D++ + Q + V K Q G Sbjct: 180 HPLAEQAAPVSEDVRLQHRAIVVRDSSREHPAVTLRVFERQPRMTVSSMADKIAVQRAGL 239 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G GFLP V + LV + P DS + +A + G+ +W ++ + Sbjct: 240 GAGFLPRPRVERLLDTGELVEVPLQEPIPDSLLFIAWRRRDRGRALKWFIERLS 293 >UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZL9_PSYIN Length = 301 Score = 116 bits (291), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 75/299 (25%), Positives = 138/299 (46%), Gaps = 7/299 (2%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T E + + GS++ AAE+L SA+SY ++++E L V +F + R LT Sbjct: 4 STITLEAITVLDAIEKRGSYAAAAEQLNKVPSALSYIVQKLEDQLQVTIFQKQGRRSVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G+ + +L + + TI+ G E ++ I I+ +L T + V+ Sbjct: 64 PAGKNLLNEGRVILEAVERLTVKTQTIANGWEPKLNIAIDSIL----QTTVIFSVVNDFL 119 Query: 123 PTC---QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 C ++ ++ E+ NG W+A+ ++ ++ IG P GI + FA++P Sbjct: 120 TACPNVEMDISEEILNGAWEALAEDKIDMIIGVPGPAPKQKGIQTLHLCDFEPVFAVSPT 179 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA +P++ + + Y ++ DTA + ++ + VP + K + QI G Sbjct: 180 HPLAKQAQPLSNALIAEYRAVVAHDTARNWIAQTQSVISEDKYFYVPSMDYKIRAQIAGI 239 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 G GFLP ++E + L+ QI R + LA + G+ + +++ N L Sbjct: 240 GCGFLPRCRIQEFLQNGQLLELQITPTRPAVPLYLAWKVVNQGKALKMLREMLIANKAL 298 >UniRef50_A8GHI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=A8GHI5_SERP5 Length = 313 Score = 113 bits (282), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 9/278 (3%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 +T GSFS AAE L T SAISY + +E+ L V LF R+ I LT+ G + ++ Sbjct: 12 ISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITLTDEGEFLLQEG 71 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 + +LN ++ R+ I + + +RI ++ T + ++ P I+V E Sbjct: 72 SWILNAVQDLESRVRNIPK-FDNNIRIVVDNFFPLETITQDIRDYIQHS-PNANISVQRE 129 Query: 133 VYNGVWDAIINNQAN--IAIGA-PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 NG WDA+ NN+A+ IAIG PD++ +G + + ++P HP A +P+ Sbjct: 130 ALNGTWDALKNNRADLIIAIGQIPDSV----QAKTLMLGKLNFVLCVSPSHPFAAQKKPV 185 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 ++Q +++ D++H + K+ + Q ++V D +K G G GFLP ++ Sbjct: 186 DKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHGFLPPALI 245 Query: 250 REAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 + + LVT + + D + LA ++ G W Sbjct: 246 EKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSW 283 >UniRef50_P67661 Uncharacterized HTH-type transcriptional regulator yhaJ n=105 Tax=Enterobacteriaceae RepID=YHAJ_ECO57 Length = 298 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 83/291 (28%), Positives = 134/291 (46%), Gaps = 9/291 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + T Sbjct: 7 LTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNV 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + LL + + +++G E + I L+ TP + ++ K Sbjct: 67 GRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFPLIDKLAAKA--N 124 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDT-LLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + TEV G W+ + +A+I I APD I+ ++ + + APDHP+ Sbjct: 125 TQLAIITEVLAGAWERLEQGRADIVI-APDMHFRSSSEINSRKLYTLMNVYVAAPDHPIH 183 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 PEP++E Y I V DTA LL Q + V K Q + G G+ Sbjct: 184 QEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVAT 243 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSR--MLLATQHSATGQVTQWIKKQF 292 +P MV + + + L ++ +P S +++A + + G+ W ++ Sbjct: 244 MPYPMVEKDIAEGRL---RVVSPESTSEIDIIMAWRRDSMGEAKSWCLREI 291 >UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=Alteromonadales RepID=A8H1R5_SHEPA Length = 304 Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 13/284 (4%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E LL GS++ AAE+L SA+SY ++++E L V LF R R LT +G++ Sbjct: 9 EALLVLDAIEHRGSYAAAAEQLNKVPSALSYIVQKLEEQLGVTLFVRQGRRAVLTPAGKH 68 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLL-YTPKHTARLLQVLKKQFPTCQ 126 + +L+ + + TI+ G E ++RI + ++ P T ++Q + + Sbjct: 69 LLVEGRKVLSVINTLSEQTQTIANGWEPKIRIACDSIIDINPIFT--VIQQFLSEHQNIE 126 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF-- 184 + V EV NG W+A+I ++ ++ IGAP + + GI + G + ++ H LA Sbjct: 127 VDVQEEVMNGTWEALIEDRVDLVIGAPAPVPNQKGIRAIKTGELNSVLVVSKSHELATEA 186 Query: 185 --VPEPIAESQLRLYPNIMVEDTAHTINKKVGW---LLHGQESILVPDFNTKCQCQILGE 239 E S+L Y +++V DTA ++ W LL G + V K + G Sbjct: 187 LRANEQTQTSELSKYRSVIVHDTA---KHEIPWSANLLEGSQHFYVSSITQKIAAILAGI 243 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ 283 GIG LP M + + LV ++ N + +A + + G+ Sbjct: 244 GIGHLPTSMAQPYIELGELVVIELENKPAPQDLFMAWKITNKGK 287 >UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=Rhizobiales RepID=A9CJD5_AGRT5 Length = 322 Score = 107 bits (267), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 6/295 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSI 59 M++ T + L F T A GSFS AA L S +SYTI +E L+VVLF R+ R Sbjct: 1 MDANPTLDQLQVFLTVAETGSFSAAARALNRAQSVVSYTIANLEAQLEVVLFERNGVRQP 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LT+ GR A ++ ++ R + QG+EA + + I+ ++ A +L+ + Sbjct: 61 KLTDEGRAMLEDARRIVAGLQEMRARAKGLKQGLEAELSVAISTMVPAEAVVA-VLRDFR 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +QFPT +++ V D +++ +A I IG L + ++G +A D Sbjct: 120 EQFPTVTLSLNVGELGMVMDMVLSRKAGIGIGGA-VLRQDDDLVMEKVGHSFMLPVVAAD 178 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + P+ + +R ++V D A + K + + ++ V D TK Q G Sbjct: 179 HPLAQIERPLVLADVREEVQLVVTD-ASGLTKGRDFNVLSYKTWRVSDIATKYQLIKGGL 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH--SATGQVTQWIKKQF 292 G G LP +VR +T L ++ Q L + S G QW+ + F Sbjct: 238 GWGGLPASIVRNDLTNGSLKALELEAYEQGEYPLFTLRRVDSPAGPAGQWLAQAF 292 >UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A8GJY7_SERP5 Length = 301 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 81/294 (27%), Positives = 137/294 (46%), Gaps = 9/294 (3%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + Sbjct: 4 DRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKF 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR + LL + + +++G E + I +++ L P L+ L + Sbjct: 64 TNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTI-VSEALSPPSKLFPLVDKLALK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG-IDYTEIGAIRWAFAIAPDH 180 T Q+++ TEV G W+ + +A+I I APD I+ ++ + + AP H Sbjct: 123 ANT-QVSILTEVLAGAWERLEQGRADIVI-APDMHFRASSEINTRKLYKVMSVYVAAPGH 180 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P+ PEP++E Y I V DTA LL Q+ + V K + G G Sbjct: 181 PIHLEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQQRLTVSTIEDKRLALLAGLG 240 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPR--QDSRMLLATQHSATGQVTQWIKKQF 292 + +P MV + + + L ++ P ++ +++A + + G+ W ++ Sbjct: 241 VATMPYPMVEKDIEEGRL---RVVGPEYSREVDIIMAWRRDSMGEAKAWFLREI 291 >UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=Q39A93_BURS3 Length = 302 Score = 104 bits (259), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 77/296 (26%), Positives = 130/296 (43%), Gaps = 11/296 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L AF GSFS AA +LG S +SY + +E L + LF R R +LT +G Sbjct: 8 DQLRAFVAVVEAGSFSGAARQLGRAQSVVSYAVASLEAQLGMPLFERGRRRPQLTAAGEV 67 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 A L ++ + + G+EA + + ++ + PK +Q + FPT + Sbjct: 68 VLADARRLDMLMGQLQAKTAGLRGGVEAELSLAVDVMFPLPK-LVEGMQAFAEAFPTVAL 126 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAP-DTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + E GV + + + I P D ID T +GA+ AP HPLA Sbjct: 127 NLAIEALGGVLKLVFDGGCVLGISGPIPNWPD--AIDATSMGALELLTVAAPMHPLALRD 184 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 PI S+ R + I++ D + + + + ++ + V D K + + G G G +P Sbjct: 185 APIPLSEAREHTQIVLTDRSKVTDGQ-SFGIYATRTWKVADLGAKHRLLLAGLGWGSMPM 243 Query: 247 YMVREAMTQSLLVTRQIHNPR--QDSRMLLATQHSATGQVTQWI----KKQFAPNG 296 +++ + + LV Q+ + R + L+ A+G QW+ +Q PNG Sbjct: 244 HLIEDDLQSGRLVPVQLADRRTFRYGLSLIRRADRASGPAAQWLIDYWSRQGDPNG 299 >UniRef50_A3QAQ4 Transcriptional regulator, LysR family n=1 Tax=Shewanella loihica PV-4 RepID=A3QAQ4_SHELP Length = 290 Score = 103 bits (258), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 16/212 (7%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELT 62 I T E L + A+ GSFS AA+ELG++ +A++ I+ +E L++ LF R + +LT Sbjct: 2 IITTERLQYIVSVAQHGSFSGAAKELGVSVAAVNKAIQHLEFDLELTLFERHGGKKPQLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 + G+ + KA ++L A++R+ +S+GIE+++ IC++ PK+T +L+ L ++ Sbjct: 62 QEGKRLYVKALEILPKLIAMERQAQMMSEGIESQLSICLHPYTCYPKYT-QLIGELAARY 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I + E W N Q +I I AP+ L + G++ I I+W AP HPL Sbjct: 121 PDLEINI-VEAETLDWQ---NLQCDIII-APNRLANLRGVNIQTISRIKWLLVSAPQHPL 175 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVG 214 A QLR P + D H + G Sbjct: 176 A---------QLRSAPELEDFDHHHQLMPPAG 198 >UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9M6_9GAMM Length = 294 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%) Query: 18 RFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLN 77 + GSF+ AA L S ++YT++++E L V+F + R LT +GR + LL Sbjct: 16 KKGSFAAAANALFRVPSTLTYTVQKLEEDLGFVIFRKEGRRSVLTPAGRVLLEEGRHLL- 74 Query: 78 DFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK--KQFPT-CQITVTTEVY 134 A + ID Q +++ + +N L T +LL +L +Q T +I + EV Sbjct: 75 --LATQAMIDKAHQ-VDSGWEVSLNIALDTVWDIEQLLPILAEFQQLNTGVEINLLEEVM 131 Query: 135 NGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQL 194 G +A+I ++A+I +G P G+ + E+ +W A DHPL P+ + Sbjct: 132 GGSLEALIEDRADIVLGGPPPSATIQGLQFKEMMQSQWCLVTAKDHPLTKTSLPLTNEMM 191 Query: 195 RLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMT 254 Y +I+++D++ + ++ Q+ I V K G GIGFLP + ++ + Sbjct: 192 TAYTSIVIKDSSRQSPIQSHRIMAKQKQIKVASMAQKISLIEAGIGIGFLPRHKIQGKLD 251 Query: 255 QSLLVTRQIHNPRQDSRMLLATQHSATGQVTQW 287 + LVT + P Q + + + + G+ +W Sbjct: 252 EGTLVTLETAEPTQSTPQYCSWKRNNKGKAARW 284 >UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=Shewanella RepID=A9KVN3_SHEB9 Length = 300 Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 91/307 (29%), Positives = 143/307 (46%), Gaps = 40/307 (13%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + LL F T A GS A+++L T AIS +IK++E+ LD++LF R + +TE Sbjct: 1 MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVL---KKQ 121 GR + +LN+ +K+ +++G EA + + + AR+L +L + + Sbjct: 61 GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFE----ASFNLARILPILELTQNE 116 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAF------- 174 FP QI + E G +A+ ++A I I A GGI+ + A+ Sbjct: 117 FPYTQIILKQEFLTGALEALNQDKAEIIISA-------GGIEPIRSSHLELAYLFSGSLL 169 Query: 175 -AIAP----DHP-LAFVPEPIAESQLRLYPNIMVEDTAH-TINKKVGWLLHGQESILVPD 227 AP HP L++ E + E Q I+++DT T N + G + GQ V D Sbjct: 170 DVAAPRMLERHPTLSYARELVNEYQ------IVIQDTGSGTANIEFG-VQAGQRRWYVND 222 Query: 228 FNTKCQCQILGEGIGFLPDYMVREAMTQSLLVT---RQIHNPRQDSRMLLATQHSATGQV 284 F TK G G G LP YM+ +++ Q +L+ R+ N Q ++ HS G V Sbjct: 223 FYTKKMLIQSGMGWGKLPHYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPV 282 Query: 285 TQ--WIK 289 Q W K Sbjct: 283 AQALWQK 289 >UniRef50_A4A494 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A4A494_9GAMM Length = 310 Score = 101 bits (252), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 79/271 (29%), Positives = 122/271 (45%), Gaps = 13/271 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T + L A R GSF+KAAEEL TSA+SYT++++E L V LF R R LT Sbjct: 14 SPITLDALQALDAIDRRGSFAKAAEELEKATSALSYTVQKLEEQLGVTLFQRQGRRSVLT 73 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 SGR + +L + ++ ++ G E R+R+ + L +L++Q Sbjct: 74 PSGRLLLEEGRKILVATTYLADQVKELATGWEPRLRLGLESTTEREPFFQALGTLLEEQ- 132 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I + V NG W+A+ + ++ +GA + G I A HPL Sbjct: 133 PNLEIDIQECVLNGGWEALETDSIDLLMGATSPIPLQKGFRALPIPPADMLLVAAASHPL 192 Query: 183 AFVPEPIAES------QLRLYPNIMVEDTA-HTINKKVGWLLHGQESILVPDFNTKCQCQ 235 A P A QL + ++ DTA H + + G L G +++ V K Q Q Sbjct: 193 A----PKANDAQTVARQLPYHRRVVTHDTAKHNVMRNAG-LTTGTQALYVQTMEQKVQAQ 247 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNP 266 + G G+G LP +++ + LV P Sbjct: 248 LAGLGVGHLPRKLIQGHLDSGALVKLTTDEP 278 >UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X032_DESRD Length = 298 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 83/303 (27%), Positives = 137/303 (45%), Gaps = 25/303 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ + L F TAA+ GSFS+A +L SA+S ++ +E V LF RS + +ELT Sbjct: 4 YSLDQLECFVTAAKAGSFSEAGRQLNKAQSAVSTSVANLEIDFGVPLFDRSGKYLELTSE 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK---Q 121 G R+A +L ++ R + +E RVR+ I++ L +P LL+VL + Q Sbjct: 64 GEVLLREAETILYRCARLQNRALAFAADVETRVRVAIDEALRSP-----LLEVLPEFAAQ 118 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGI-----DYTEIGAIRWAFAI 176 FP ++ V+ ++ V A+ A+I LL G GI Y +G I + A+ Sbjct: 119 FPATEMDVSEGLFTDVHRAVALGHADIG------LLIGTGIPEPTVKYKLLGYIPFQAAV 172 Query: 177 APDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 A HPLA + +A S L I++ + ++ H + + + Sbjct: 173 AAHHPLA-AKKQVAVSDLEDERQIIITSRGEQRHSEITPFSH--RLWVAESYASGLGMIR 229 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G G FLP+ ++++A +V + H LL + GQ QW+ + FA Sbjct: 230 KGVGWAFLPEPVLQDATGDGSIVALSLELEHRVHTSPLYLLWKRDDVVGQAGQWLFEMFA 289 Query: 294 PNG 296 G Sbjct: 290 EMG 292 >UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B9YYZ1_9NEIS Length = 314 Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 10/241 (4%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 G F++AA L + SA+SY + R++ L V L R ++LT +G R+AT L+ Sbjct: 21 GGFAQAASALNRSQSAVSYNVARLQEQLGVGLLEAEGRRMKLTAAGAALLREATPLIEAA 80 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 ++ R + G EA VR+ ++ L T L P ++ V V +G D Sbjct: 81 LRLEARARALDAGWEAEVRLAVDSLFPTDALLCALAG-FAGHCPDTRLQVHEVVMSGADD 139 Query: 140 AIINNQANIAI--GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLY 197 A+ +AI P + +D T + AP HPL +P+ E LR Y Sbjct: 140 ALYAGAVELAIVTRVPSGFMGDWLMDATFVA------VAAPGHPLLAAGQPLGEDDLRRY 193 Query: 198 PNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSL 257 P ++V D+ + GWL Q V +T G G+LP++ +R+ + L Sbjct: 194 PQVVVRDSGTRQPRDEGWLGASQRWT-VSSPHTALDVVSAGLAYGWLPEHRIRQPLAHGL 252 Query: 258 L 258 L Sbjct: 253 L 253 >UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8U4_9DELT Length = 305 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 12/297 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L F + GSFS AA +LG SA+SY I +E +++ LF R+ R LTE+ Sbjct: 6 ITLDQLAVFLSIVEHGSFSGAARKLGRAQSAVSYAIANLERLIELELFDRTGRKPVLTEA 65 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A + + R + +G+EAR+ + ++ PK L ++++P Sbjct: 66 GRALLDDARAVHGQVDHLLARAQRMREGVEARLSVAVDVFFPMPKLLTALAS-FRRRYPE 124 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLD-GGGIDYTEIGAIRWAFAIAPDHPL- 182 + + TE V + + + P L D I+ + I A DHPL Sbjct: 125 VPVHLRTEALGAVAQLVADGAVQFGVSVP--LRDFPSAIERRPLWPIEMVTVCAADHPLA 182 Query: 183 --AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 A E + +++R + +++ D + T+ + + G ++ + D K C I G G Sbjct: 183 QRARADEAVPLARMREHTQLVLTDRS-TLTAGLDVAVAGDDNWRLADLPAKQACLIAGFG 241 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSAT---GQVTQWIKKQFA 293 G +P +MV + + LV ++ + ++ + T H A G +W+ +QFA Sbjct: 242 WGNMPRHMVEGDLAEGRLVRVEVSEWGPATYIVEMCTIHRAASPPGPAGRWLLEQFA 298 >UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46RP0_RALEJ Length = 306 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 2/290 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L + AR G+F+ A +EL S++SY ++++E+ L + +F RS + LT + Sbjct: 3 ITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTLA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL ++ R+ G EA ++I + L+ + + + Sbjct: 63 GEVLLDEGRRLLRAANDLEERVRRAEAGWEAELKIATDALVPF-DAILPFISAFQAENSY 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E+ W A+ N ++ IGA G+ G R F +AP HPLA Sbjct: 122 TRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLFTVPAGTARSIFVVAPGHPLAA 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 V EPI + L + + V + + L+ GQ I VP + K + G G+L Sbjct: 182 VEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGYL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFA 293 P + + + LV R++ R +A + + G+ + WI+++ A Sbjct: 242 PVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIERKEA 291 >UniRef50_C5BEG7 Transcriptional regulator, LysR family protein n=2 Tax=Edwardsiella RepID=C5BEG7_EDWI9 Length = 300 Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 75/302 (24%), Positives = 127/302 (42%), Gaps = 12/302 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E LL R GSF+ AA+ L T +A+SY ++++E+ L++ L RS T SGR Sbjct: 6 EVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFTRSGRI 65 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 K LL++ ++ + + G E + I + + P ++ + P ++ Sbjct: 66 ILEKGRRLLSEAQELELQATLLESGWEMEIFIALEGYIL-PHTLDPVIGAFIQAHPHTRL 124 Query: 128 TVT--TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + T +NG A+I IG L + Y +G I A+ PDHPL+ Sbjct: 125 HLMPHTPTHNGQ-SGEPGVMADIIIGTAPLLPENSDYTYQSLGYIDTLLAMTPDHPLSRS 183 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES---ILVPDFNTKCQCQILGEGIG 242 P+ QL I++ D V GQE+ I+V D + + G GIG Sbjct: 184 GHPLTPDQLGEQRTIVMGDRLAVSPATV-----GQETPQHIVVYDPAYQISLLLSGAGIG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 +LP + +R +TQ L + + +H+ G QW ++ + ++ Sbjct: 239 YLPRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLHPALF 298 Query: 303 QD 304 D Sbjct: 299 GD 300 >UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales RepID=Q21E79_SACD2 Length = 304 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 17/293 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E AF GSF+KAAE L + SA+SY I ++E L + T+ R LTE+G+ Sbjct: 8 EQWAAFKAVVDEGSFAKAAEALNKSQSAVSYAIAKLEEQLPTPVLTQQGRKAVLTEAGKQ 67 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +R ATDLL I+ ++ G E+ V I ++ L++ LQ P ++ Sbjct: 68 LYRHATDLLAQAATIENTAKYLASGWESEVTIAVD-ALFSMGAVFCALQHFSVSSPQTRL 126 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG---GIDYTEIGAIRWAFAIAPDHPLAF 184 + +G +A++ +A D +L G G T +G + + HPL Sbjct: 127 RILETTLSGTEEALLGRKA-------DLVLTGTIPPGFSGTRLGEVSMIPVVGQQHPLVQ 179 Query: 185 VPE---PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + + PI E +L + I++ DT + GW L ++ V T + G G Sbjct: 180 LMQQSGPITEQELGRHRQIVLRDTGTKREQSSGW-LRAEQRWTVTHAATSIEAVKNGLGF 238 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQD--SRMLLATQHSATGQVTQWIKKQF 292 FLP + + + L+ + + S L+ T+ G TQ I +Q Sbjct: 239 AFLPKEKILQELEAGSLIEVALAEKMERFISLYLIKTERQNAGPATQAIAQQL 291 >UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKF9_CELJU Length = 330 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 108/248 (43%), Gaps = 10/248 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E A G +++AAE L + S++SY I ++E+ L V +F R T +G Sbjct: 37 TLEQWRALLAVIDAGGYARAAELLNKSQSSVSYAISQLESALSVKVFQLQGRKAVATPAG 96 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +R+A LL +++ +S +E ++I + L+ P + L+V + FP Sbjct: 97 ELLYRRAKQLLEQAERLEKSAGCLSVQVEPLIKIAAD-LIIPPARILQCLEVFSEHFPET 155 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGA--PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V V +G DA++ Q ++AIG P + + T G + DHPL Sbjct: 156 RVEVFESVLSGTEDALLQRQVDLAIGGRVPPGFMGEKLVTVTMHG------VSSADHPLQ 209 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + PI +R + I+V D+ + GW + V T +G G + Sbjct: 210 QLGRPINYEDMRQHRQIIVRDSGQYRRRSEGW-QEADQRWTVSHIKTSLDAIRMGLGFAW 268 Query: 244 LPDYMVRE 251 LPD E Sbjct: 269 LPDPYTHE 276 >UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S803_CHRVI Length = 305 Score = 90.5 bits (223), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 111/242 (45%), Gaps = 12/242 (4%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GSF AAE L T S++SY +KR++ L V + R LTESGR ++A LL++F Sbjct: 23 GSFEAAAESLNRTQSSVSYGLKRLQEQLPVTVLEPQGRRTVLTESGRLLLQRARVLLHEF 82 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK---QFPTCQITVTTEVYNG 136 ++R T+ QG E VR+ + ++ LL+ L + Q P Q+ + V +G Sbjct: 83 KRLERLAATLGQGWETTVRLAVEIVMPLEP----LLEALARFTEQAPQTQVQLVETVLSG 138 Query: 137 VWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRL 196 +A++ +Q ++AI T L G + + + DHPL + + LR Sbjct: 139 TGEALVRHQVDLAI----TGLIPPGFIGDPLLRVDFVAVARHDHPLHRLGRVLTLDDLRA 194 Query: 197 YPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQS 256 + +++ DT H GW L +E V T G ++P+ +R + + Sbjct: 195 HRQVVIRDTGHWRPVDSGW-LEAEERWTVSHLRTAIALIERGLAFAWIPESSIRAELARG 253 Query: 257 LL 258 L Sbjct: 254 EL 255 >UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria RepID=B9JQG7_AGRRK Length = 305 Score = 90.1 bits (222), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 58/254 (22%), Positives = 113/254 (44%), Gaps = 3/254 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E L +VL RS + T++ Sbjct: 4 FTLHDLQCFDAVVRSGGFQPAAAMLHRSHPAVFAAVAKLERQLGLVLLDRSGYRVRATDA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E + + I L P+ LL Q P Sbjct: 64 GLSFHRRAQSLLRELEGLRAHAAQLSMGEETDIHVVIGDLCPRPE-VLGLLGRFFAQCPG 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E G W+ +I+ +A++ + + ++ ++ + + +AP Sbjct: 123 TRLHLHFEAVGGPWERLIDGEADLILHWVEK--SDSRAEWVDLCNVPFIPVVAPGFLPKR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +PI Q+ + ++ DTA ++ +++ G +VPD K + + G G G + Sbjct: 181 IKQPITPDQMHTFTQCVIRDTARHSPQQDYFMIEGAPQCMVPDQGMKKEIILQGLGWGHM 240 Query: 245 PDYMVREAMTQSLL 258 P +++ E + L Sbjct: 241 PGFLIEEELRDGRL 254 >UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FHS9_SORC5 Length = 309 Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 24/305 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ T E L F A GSFS AA +L SA+S+ + +E+ L + L+ RSTR Sbjct: 1 MHDSITLEQLRTFIAVADEGSFSAAARKLRRVQSAVSHAMANLESQLGIALWDRSTRIPA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR A + D A+ ++ G++ V +C++ ++ L + Sbjct: 61 LTEHGRVLLGAARRVCADADALSSAAQRLAGGLDPLVSLCVDA-IFPLSALVDLCVEFAR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +PT ++ V TE V D +++ + + P G++ + ++R + H Sbjct: 120 AYPTVELVVHTETMAAVADRVLDGTCQLGVVGPAATAQ--GLERQHLTSVRMVAVVGEAH 177 Query: 181 PLAFVP---EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVP------DFNTK 231 PLA +A QLR + I++ + + ++++L P D TK Sbjct: 178 PLAAAAPRGARVATEQLREHVQIVLSERGGARSP--------EQAVLSPRTWRVVDLETK 229 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHS---ATGQVTQW 287 + G G G LP++M+R+ + LV D +L LA H G QW Sbjct: 230 RELLCAGLGWGNLPEHMIRDDLNAGRLVRIWPAAWGDDEHVLPLAVVHRPGLVQGPAGQW 289 Query: 288 IKKQF 292 + K+ Sbjct: 290 MLKRL 294 >UniRef50_A8FU64 Transcriptional regulator, LysR family n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FU64_SHESH Length = 283 Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 125/260 (48%), Gaps = 21/260 (8%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E+L + GSF KA+E+L SA+SY++K++E+ D+ +F R T ELT GR Sbjct: 5 EHLQVIDSICAEGSFQKASEKLHKVRSAVSYSVKQVESYYDIQIFNRETYRPELTADGRL 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 + LL + I+ I E +R+ ++ K T RLL LK++FP I Sbjct: 65 LIVQIRHLLKQASEFETFINEIKGESETELRLGVSSTFPLDKIT-RLLIELKQEFPKTTI 123 Query: 128 TVTTEVYNGVWDAIINNQANIAI-GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + EV +G +++ + +IAI G+P IDY I + I+ + PL + Sbjct: 124 HLEIEVASG-ERMLLDGKVDIAIYGSP---FKNKAIDYKLIDTMNVPLVISKNLPLVDIN 179 Query: 187 EPIAESQLRLYPNIMVEDTAHT------INKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 ++E++L YP ++++ T +++ + W V D +TK G G Sbjct: 180 R-VSEAELAAYPQVIIKSTDSKSPDTGILDEALKW--------YVTDLHTKKTLITQGLG 230 Query: 241 IGFLPDYMVREAMTQSLLVT 260 G LP ++V + + + L++ Sbjct: 231 WGRLPQHLVEKEIENNELIS 250 >UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C8SS95_9RHIZ Length = 324 Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 13/261 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E LD+VL RS + TE+ Sbjct: 4 FTLHDLQCFDAVIRTGGFQPAAALLHRSHPAVFAAVAKLERQLDLVLLDRSGYRVRPTEA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E+ + + I L P+ +L +L + F Sbjct: 64 GLSFHRRAQALLRELEGLRVHAAQLSMGEESEIHVVIGDLCPRPQ----VLGMLGRFFAQ 119 Query: 125 C---QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG--IDYTEIGAIRWAFAIAPD 179 C ++ + E G W+ + +++A++ + +D G +++ ++ + + +AP Sbjct: 120 CPGTRLHLHFEAVGGPWERLFDDEADLIL----HWVDKGDARVEWVDLCKVPFIPVVAPG 175 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 + EPI Q++ ++ D+A ++ L+ G LV D K + + G Sbjct: 176 FLPQRIQEPITPDQMQALTQCVMRDSARHSPQQNYSLIEGAPQCLVADQGMKKEIILQGL 235 Query: 240 GIGFLPDYMVREAMTQSLLVT 260 G G LP +++ + + L + Sbjct: 236 GWGHLPRFLIEDELHDGRLCS 256 >UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS33_DESAD Length = 298 Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 3/180 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E++ AF T GSFS AA LG S IS I +E L + LF RS + ++T+ Sbjct: 3 FSIEHIEAFVTVVDTGSFSAAARSLGKVQSQISTAIANLEDDLGITLFDRSGKYPQITQK 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH-TARLLQVLKKQFP 123 G K+ LL + + D ++ G + +R+ +++ Y P H T ++L +++FP Sbjct: 63 GEELLFKSRKLLRQSEKLIKHADRLALGEQTLLRLALDE--YMPLHITTQVLNSFQERFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 T + V V + + QA++ I P + G+ + ++ + + AP+HPLA Sbjct: 121 TIDLEVLWGAVGNVQKNVSSGQADVGIDVPVDNIASSGLSFKKLSLMEFCAVAAPNHPLA 180 >UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EV09_SORC5 Length = 311 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 16/305 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+AF A G+FS A+ L + A+S ++ +E L + LF R LT++ Sbjct: 1 MTYDQLVAFLAVAGEGTFSAASARLHKSQPAVSKLVRNLERELGIELFDRREYRATLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTP-KHTARLLQVLKKQFP 123 GR F +A ++ A++ +S +E VR+ ++ + TP + + L+ + P Sbjct: 61 GRLFHERAAAVIEGTEALRSFGMRLSGKVEPIVRLAVDAV--TPLGPIMDIFRGLQARHP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +I + TE G DA+ ++A++A+ A +DG ++ +R DHPLA Sbjct: 119 LVRIELGTERLAGTADALREDRADLAV-ATKLGIDGSAVEAARFCDVRVIPVARFDHPLA 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 PI + LR + I++ D+A +L G V D K + + G G G Sbjct: 178 TSGAPIPPALLRAHAQIILRDSARASASPSLNVLEGGLRWTVTDVAAKKEVILAGMGWGG 237 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP+++ A+ LV Q+ D+ L I+++ P+G++ Sbjct: 238 LPEHVAAGALAAGELVALQVPEFEADTMELFV------------IRRRDRPHGVVAQALW 285 Query: 304 DLLHR 308 + L R Sbjct: 286 EALGR 290 >UniRef50_Q161W6 Transcriptional regulator, LysR family n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q161W6_ROSDO Length = 298 Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 21/285 (7%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GSF+ AA + SA+S+ I+ +E LDVVLF R+ R T +G +A +L+ Sbjct: 20 GSFTAAAARVQRAQSAVSHAIRTLEADLDVVLFDRTGRKPVRTPAGDAIIAEARTILSRV 79 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKH-TARLLQVLKKQFPTCQITVTTEVYNGVW 138 +K R IS G+E+ IC+ + P+ LL + +FPT + + E GV Sbjct: 80 DHLKARARGISAGMES--EICLATSVIAPREGVLDLLDAFRAEFPTIGLRLFVEEIGGVP 137 Query: 139 DAIINNQANIA-IGAPDTLLDGGGIDYTEIGAIRWAFAIA---PDHPLAFVPEPIAESQL 194 +++ +A++ +G P L G + E A+ + +A PDHPLA + P+ E L Sbjct: 138 QLLMDGRADLGLLGKPS--LAGAVFEPLEATAVGTSDVVAVARPDHPLAMMDRPLTEVDL 195 Query: 195 RLYPNIMVEDTA--HTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREA 252 + ++ A +N+ V + + + + + + G G G +P Y+V Sbjct: 196 TDHRQLVPTSRALPRYLNRMVNDIWE------IAELDMRHEMLRRGMGWGTVPTYLVERD 249 Query: 253 MTQSLLVTRQIH-NPRQDSRMLLATQH---SATGQVTQWIKKQFA 293 + LVT I P + R+ L H +A G T+W+ ++ Sbjct: 250 LASGRLVTLDISARPDEVMRVPLFAAHKKDAAIGPATRWLIEKMG 294 >UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q1QYG6_CHRSD Length = 307 Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 112/240 (46%), Gaps = 6/240 (2%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 G F++AAE + + S +++ + ++E L + + R + LTESG R+A LL Sbjct: 19 GGFARAAEAVHKSPSTLNHAVHKLEEQLGIRVLEPVGRQVRLTESGAMLLRRARQLLESA 78 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 A++ +++G+EA V + ++Q ++ P A L + +++P ++ + V NG + Sbjct: 79 EALEDVAGRLAEGLEAEVVLAVDQ-IFPPDALAHALDAVSREYPHVRVQLHETVLNGGIE 137 Query: 140 AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPN 199 + + +A++ + + G + + + PDHPL + + L + Sbjct: 138 MLYDGRADLVVSG----IAAQGFLGEPLVNVTFLAVSHPDHPLQHLGRELDLRDLEQHRQ 193 Query: 200 IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLV 259 ++V D+A + GW L ++ + T G G ++P +R+A+ Q LV Sbjct: 194 LVVRDSALRQSMDAGW-LKAEQRWTLSHLETSLDMLCRGLGFAWMPTTRIRDALRQGTLV 252 >UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=Gammaproteobacteria RepID=A4VMY3_PSEU5 Length = 435 Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 63/242 (26%), Positives = 111/242 (45%), Gaps = 12/242 (4%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 G F++AAE L + S++SYT+ RM+ L V L R LTE+G R++ L+ Sbjct: 154 GGFAQAAEALHRSQSSVSYTVARMQEQLGVPLLRIDGRKAVLTEAGEVLLRRSRQLVTQA 213 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT---CQITVTTEVYNG 136 ++ + QG EA VR+ ++ +A+L++ L P C++ + EV +G Sbjct: 214 SQLEELAHHMEQGWEAEVRLVVD----AAYPSAKLIRALSDFMPKSRGCRVRLREEVLSG 269 Query: 137 VWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRL 196 V + + + A++AI LD G +E+ + + DH L + ++ L+ Sbjct: 270 VEEVLKDGTADLAISG----LDITGYLGSELSTVEFVAVAHADHALHQLGRKLSVQDLQS 325 Query: 197 YPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQS 256 I+V DT + GW L ++ V T G G +LP +++ + + Sbjct: 326 QMQIVVRDTGLRQPRDAGW-LGAEQRWTVGSLATSVAFVSSGLGFAWLPRHLIGRELAEG 384 Query: 257 LL 258 LL Sbjct: 385 LL 386 >UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=Rhodobacterales RepID=Q1GM59_SILST Length = 296 Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 20/306 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+A G+F AA+ L SA+S+ IK++E L LF+R T L+ Sbjct: 1 MTLDQLIALDAIVASGTFRAAADRLNKAQSAVSHQIKKLEDELGFDLFSRDTYRPRLSPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGI----EARVRICINQLL-YTPKHTARLLQVLK 119 G F+R+ T +L +K T++ G+ E V I I + P T LL + Sbjct: 61 GEVFYREVTRVLEQVNGLK----TVAAGLRSEQEPLVSIVITATMSLDPILT--LLGEVG 114 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE---IGAIRWAFAI 176 + FP I + TE+ G +++ +A++ I LD ID E +G I Sbjct: 115 RAFPATHIKLVTEMMGGPLARLMSGEADLIIAG----LDDVPIDEVETRPVGTITIRPVA 170 Query: 177 APDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 +P P A + +++ Y ++V T + LL G + V DF K Sbjct: 171 SPAFPAADPARVKSRREMQSYTQVVVSGTGGKEYDQSRDLLSGGQRWTVSDFQAKISIIK 230 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G G +P++++R+ + LV I PR + + G+V I Sbjct: 231 AGLGWGGIPEHLIRDELKTGALVPLAIEGYPPRHTEIFAIRRRDRPMGKVMSRIWDDLGR 290 Query: 295 NGILTG 300 GI G Sbjct: 291 GGIQDG 296 >UniRef50_Q12M83 Transcriptional regulator, LysR family n=21 Tax=Shewanella RepID=Q12M83_SHEDO Length = 309 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 4/240 (1%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GSF+KA+E L SA+SY +K++E L V LF R ELT G+ + LL Sbjct: 18 GSFAKASERLHKAQSAVSYQVKKLEQHLGVTLFNRDKYRAELTPEGKVILIEGQRLLEQL 77 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 I+ SQG E ++ + I+ L L ++ + PT +I + E GV Sbjct: 78 ANIEHLASRFSQGWEPKLELVIDGSLPMEPIMTALKRMSEHNVPT-KIQLNMEFLGGVQH 136 Query: 140 AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPN 199 ++A++ + G D + +I +A HPLA + + ++ SQL+ + Sbjct: 137 RFERDKADLML--VKDYRSGPYYDAKPLPSITSVLVVANSHPLA-LSKAVSLSQLQQHVE 193 Query: 200 IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLV 259 + +ED++ + + G + + F K + G G G++PD+++ E + LV Sbjct: 194 LTIEDSSPSRLGRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWMPDFLIGEELAAGELV 253 >UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YZZ9_LISDA Length = 292 Score = 84.0 bits (206), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/184 (32%), Positives = 90/184 (48%), Gaps = 12/184 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E L AF AA GSFS A +L S IS + +E L+V LF R+TR +LTE Sbjct: 3 FSIEQLEAFVAAAETGSFSAGARKLNKAQSVISTAVANLELDLNVTLFDRTTRKPQLTEH 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G KA +L+ + D + QG+E+++ I + + + T L + ++ +P Sbjct: 63 GHTLLVKAKRILSQCQQLVANADELQQGVESKLTIALQSMTMSQPLTQALAK-FEQDYPF 121 Query: 125 CQITVTTEVYNGVWDAIIN--NQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +I E+ N D I++ N IGA DTL I+ IG++ +AP Sbjct: 122 VEI----EILNATEDEIVSLLNSGRAQIGALLQLDTLPQ--EIEAHGIGSLAMVCIVAPS 175 Query: 180 HPLA 183 HPLA Sbjct: 176 HPLA 179 >UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=Mesorhizobium RepID=C8SVH9_9RHIZ Length = 317 Score = 83.6 bits (205), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 80/292 (27%), Positives = 131/292 (44%), Gaps = 12/292 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELTES 64 T + L A GSFS A +L S ISY I +E L + LF R TR +LTE Sbjct: 6 TLDQLQILVAVADTGSFSAAGRKLNRAQSVISYGIANLEAQLGLKLFEREGTREPQLTEI 65 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A ++ ++ R D G+EA V + ++ L + R+L+ + QFPT Sbjct: 66 GRAMLEDARRMIGVLQRMRSRADGHHHGLEAEVALSVDASLPSSV-LVRVLKAFEMQFPT 124 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + D +++ QA++ IG LL + IG + A AP HPLA Sbjct: 125 VMLRLHIGTLGLIPDHVVSGQADLGIGG---LLGDVDVHLVRIGFMSIVLAAAPSHPLAL 181 Query: 185 VPEPIAESQLRLYPNIMVED-TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 +P+P+A +R + ++V D + T + G + + + D TK G G G Sbjct: 182 LPKPLALEDVREHTQLVVTDQSERTKGRDFGVFAY--RTWRLTDMRTKHMLMREGLGWGG 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH---SATGQVTQWIKKQF 292 LP +++ + + LV + P + R L H ++ W+ ++F Sbjct: 240 LPRWLISDDLASGRLVEIDL-EPFSEVRSPLFAMHRNDTSPKPAAAWLIERF 290 >UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=Burkholderiaceae RepID=B2JTV0_BURP8 Length = 321 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 5/253 (1%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L AF GSFS AA EL SAIS+ I +E+ DVVLF R+ R LT +GR Sbjct: 9 QLRAFVAVCDQGSFSGAARELRRAQSAISHAISALESAFDVVLFERNARKATLTAAGRSL 68 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 A +++ +K R I++ V I ++ ++ H L+ L+ FPT I Sbjct: 69 LADARGVISRTEEMKMRAVAIAEAGVPHVSIAVDS-YFSRAHLIECLRTLQADFPTAAIN 127 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTL-LDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + G ++ +A+ D L G I+ + + A HPLA + Sbjct: 128 LRMTTMQGGERLVLEGTCALAVTITDVPELSPGTIERHHLCDAQMVTVCATSHPLAAIVG 187 Query: 188 PIAESQLRLYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 PIA + + ++V D H + G + + V D K G G +P Sbjct: 188 PIAREEFGRHIQLVVTDNQPHAEKTQQGVV--SERQWWVNDLGAKHDLLRGGLCWGHMPH 245 Query: 247 YMVREAMTQSLLV 259 ++V + + LV Sbjct: 246 HLVAQDLANGTLV 258 >UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI0001907E1C Length = 300 Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 114/246 (46%), Gaps = 7/246 (2%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L AF A G S A LG SA+S +I E L +LF ++ R ELT+ G Sbjct: 7 ERLRAFVAVAEQGGLSAAGRFLGKAQSAVSESIAATEGQLGYLLFRKTGRRTELTDHGVA 66 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A L A K + + +EA + ++ ++ T + TA ++ +++FP + Sbjct: 67 LLPEAKATLEAADAFKAKAVSFQGNVEAELSFAVDVMVPTSRLTA-VINRFQREFPYTAL 125 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE-IGAIRWAFAIAPDHPLAFVP 186 +V +E + +NQA+ A+ TL D YT + + + HPLA Sbjct: 126 SVYSESLGSTLQTVWDNQASFAVIG--TLPDAPAEFYTAPLCEVPMCLVVGSAHPLAQAS 183 Query: 187 EPIAESQLRLYPNIMVED-TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 EPI++ L + +++ D T+ + + G + ++ V D +K + G G G +P Sbjct: 184 EPISKETLCQHNQLIISDKTSRSSGRSFG--VFSEKFWRVADLGSKLEFLRAGLGWGLMP 241 Query: 246 DYMVRE 251 +++V + Sbjct: 242 EHLVED 247 >UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=Legionella pneumophila RepID=Q5ZZF5_LEGPH Length = 302 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 6/249 (2%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F T G F A E++ + AI+ IK++E+ L LF R +LT G+ F++KA Sbjct: 10 FITIVESGGFIAAGEKMHRSQPAITNAIKKLESSLGFELFDRKVYRPQLTAKGKAFYQKA 69 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 +++ F ++ +T+ G+E + I ++ L P + A L+Q +Q+P +++ Sbjct: 70 REVVAQFMQLENSAETLRSGVETQFSIDLDIALPLPGY-APLIQSFIRQYPETCFSLSNN 128 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 + + + + ++ I A + + I+Y + +IR + D+ E I Sbjct: 129 TFVRCLERLERRECHLCIAA--SHIRSPQIEYLRMPSIRMIPVASRDYYDQH-KERINNP 185 Query: 193 QLRLYP-NIMVEDTAHTINK-KVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVR 250 +L +Y IM+ T + + K+ L H LV D + Q + G GIG LPD++V Sbjct: 186 KLGIYCMQIMIAGTQQELYQLKIEPLSHSMPKWLVGDMYIRKQLILSGMGIGRLPDHLVE 245 Query: 251 EAMTQSLLV 259 + + + LV Sbjct: 246 KELAEGSLV 254 >UniRef50_Q1D4Y5 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D4Y5_MYXXD Length = 311 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 74/302 (24%), Positives = 125/302 (41%), Gaps = 17/302 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + L A GSFS AA +LG A+S ++R+E L + LF RS R Sbjct: 1 MLESVTIDQLRTLRAVAEEGSFSAAARKLGQGQPAVSQAMQRLEKQLGLRLFDRSGRVPR 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G A L D + + + + G E ++ + ++ + T ++ L + Sbjct: 61 LTAKGEAVVAAAQRLHEDIASFQAVVGRLKSGEETKLALVVDAMFPT-DALLDFVRELAR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + E+ + V + + +A + I D LD G++ I ++ AP H Sbjct: 120 THPGVELALEVELLSAVTERVRERRATLGIAGAD--LDLTGLEQRPIALLKMIPVAAPSH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 PLA V + E+ L I++ E T ++ V G V D TK Sbjct: 178 PLAAVKGVLTEAHLASAIQIVLSERLPEGKTGTADRGV----IGSRLWRVADLMTKHSLL 233 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHN-----PRQDSRMLLATQHSATGQVTQWIKK 290 + G G G P+++VR+ + LV ++ P Q L+ + + G V W Sbjct: 234 VGGIGWGLEPEHLVRDDLAAGRLVALRLAAWEGGPPPQRPLALVRRKGTPLGPVATWASN 293 Query: 291 QF 292 + Sbjct: 294 RL 295 >UniRef50_Q5R026 Transcriptional regulator, LysR family n=2 Tax=Idiomarina RepID=Q5R026_IDILO Length = 292 Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 69/278 (24%), Positives = 119/278 (42%), Gaps = 10/278 (3%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L T A GS K AE+L T SA+S +K++E LF R +ELTE G++F Sbjct: 5 HLKMMITVANLGSLQKTAEQLNRTQSAVSMALKKLEENAGFALFNRDGYRLELTEQGQHF 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQL----LYTPKHTARLLQVLKKQFPT 124 R+A +++ ++ + G E + +C + L+ P +Q +++Q+PT Sbjct: 65 LRQAEEVVRQQQRLQSLATQLKHGAEPLLTLCYDHTCDSKLWVPS-----IQHIQQQYPT 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDG-GGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V E I N A++A+ L G + + I+ Sbjct: 120 TELHVDGESQMRALKRIDNGSADLALCPWLPLFRQYGDFETLPVAPFELTVVISTALMKE 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 F P + L P ++ ++ IN L Q+ I V + NT+ + + G G G Sbjct: 180 FGRMPQSRQDLLELPMLVPQNLEIGINLDAVLRLPSQQRIRVNEVNTQFELLMAGFGWGI 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT 281 +P ++ +A+ Q LV I Q R+ + SA Sbjct: 240 IPKHIALDALEQGKLVEISIPGFVQQVRLEIHLVRSAN 277 >UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLJ2_HAHCH Length = 293 Score = 81.3 bits (199), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 7/263 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L AF GSF AA L T S +S + +E D+ LF R T LT Sbjct: 1 MTNEQLRAFVGVVEHGSFRAAAAALFKTQSTVSAAVAALEQEFDLQLFNRETYRPTLTIE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARL--LQVLKKQF 122 G+ FR+A LL+ + ++ ++QG + I ++ + H L L+ K+ Sbjct: 61 GKALFREAKALLSKAHDLEMLGHRLAQGKAPELSISLSAMC---AHLPGLDTLKAFAKKR 117 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + TE +GV + ++ +A +AIG P LD ++TE+ + AP Sbjct: 118 PEMRLHLHTEHLSGVLEQLLLEKAEVAIG-PQVGLD-DRYEFTEVAKVTQVTVAAPGFTE 175 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + ++QLR P+I++ D+ ++ G V DF K + G G Sbjct: 176 AGGDGVVRQAQLRNRPHILIADSGSLAPFDHVNVIPGGHRWYVNDFLMKKGLLLSGMGWA 235 Query: 243 FLPDYMVREAMTQSLLVTRQIHN 265 +P +MV + + L Q+ N Sbjct: 236 RIPLHMVDAELERDELRFLQVEN 258 >UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=Oceanospirillales RepID=Q0VTN2_ALCBS Length = 312 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 65/250 (26%), Positives = 116/250 (46%), Gaps = 16/250 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + A G ++ AAE L + SAISY ++++ET L V FT R + Sbjct: 1 MSAKITLDQWQALLAVVDEGGYASAAEALNKSQSAISYAVQKIETELGVRAFTLEGRRAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTA-RLLQVLK 119 LTE+G+ +R+A L+ + ++ +SQG E VR+ + L P+H L Sbjct: 61 LTETGQMLYRQAKVLVEEANRLESAAIQLSQGWEPLVRVTADGLF--PQHCMLSALDAFA 118 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAI 176 + P ++ + + +G +A++ +A++ +G P D + +R+ Sbjct: 119 QHSPLTRVEYSETILSGSDEALLRKEADVVVGGRVPPGFFGD-------PLMRVRFLAVA 171 Query: 177 APDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 A DHPLA E + LR + I+V D+ + GW L ++ V +T+ Sbjct: 172 AADHPLAQAKE-LTHEDLRHHRQIVVRDSG-SRRIDSGW-LGAEQRWTVSHASTRMAAIR 228 Query: 237 LGEGIGFLPD 246 G G ++P+ Sbjct: 229 RGLGFAWVPE 238 >UniRef50_B8CRL7 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=B8CRL7_SHEPW Length = 295 Score = 80.9 bits (198), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 81/266 (30%), Positives = 121/266 (45%), Gaps = 31/266 (11%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +++ F T GSF+ AAEE GL S IS + R+E L + L RSTRS LTE G+ + Sbjct: 6 DMMVFATVVNSGSFTAAAEEFGLPKSNISRKVTRLEDKLGIKLLERSTRSQHLTEIGQVY 65 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRIC----INQLLYTPKHTARLLQVLKKQFPT 124 F ++++ + ++ + ++IC + Q L +P L KK +P Sbjct: 66 FEYCQRIMDEIQGAEESVEGLMSAPRGTLKICASITVGQCLLSPH-----LAPFKKAYP- 119 Query: 125 CQITVTTEVYNGVWDAIINN-QANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + N D I A I +G TL D I + FA +PD+ LA Sbjct: 120 -EVHLDIHLTNRRVDLIEEGFDAAIRVG---TLEDSSLIAKRLCKRELFLFA-SPDY-LA 173 Query: 184 FVPEPIAE-SQLRLYPNIMVEDTAHTINKKVGW-LLHGQES---ILVP-----DFNTKCQ 233 P+AE S L+ + + + T N K W L G+ES I+ P DF Q Sbjct: 174 TSNIPLAEPSDLKQHDCLFMSAT----NPKPQWHLKSGKESQTIIIAPTIRCDDFTVLRQ 229 Query: 234 CQILGEGIGFLPDYMVREAMTQSLLV 259 I G GI LP Y+ +A+ LV Sbjct: 230 LAIDGAGITKLPSYICEKAVKDGKLV 255 >UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=Proteobacteria RepID=Q2G7U4_NOVAD Length = 309 Score = 80.5 bits (197), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 7/256 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELTES 64 T + L F GSF+ AA +LG SA+SY I +E L V LF R +R L+++ Sbjct: 7 TLDQLRLFLAVVDEGSFNGAARKLGRAISAVSYGITTLEAQLGVTLFEREGSRKPVLSDA 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH-TARLLQVLKKQFP 123 G+ +A + +D A+ + + +QG+E+ + + ++ + P H A +L+ ++ FP Sbjct: 67 GKAMLAQARAVSDDVDALVAGVRSFNQGLESELGLALDVMF--PTHLVAEVLREFQQVFP 124 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 T Q+ + E + ++ +A + IG P+ L+ ++ IG++ AP H LA Sbjct: 125 TVQLRLHVEALGAIAALVVEGEAELGIGGPE-LVALPELERVAIGSVELIPVAAPSHALA 183 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + E I + R + +++ D + + + + + + + D + G G G Sbjct: 184 RM-ETIPPGEARKHRQLVLTDRSRLTDGR-DFSVVAASTWRLGDLGARHALMREGIGWGN 241 Query: 244 LPDYMVREAMTQSLLV 259 +P ++V + LV Sbjct: 242 MPRHLVDADIASGRLV 257 >UniRef50_Q65QL0 LysR protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QL0_MANSM Length = 321 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 27/266 (10%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L++FT AARFGSFS AAE L LT +A+S + +E L+V LF R+TRS+ LTE G+ F Sbjct: 12 HLISFTHAARFGSFSAAAEALDLTPAAVSKNVALLEQALNVRLFNRTTRSLSLTEEGQVF 71 Query: 69 F---RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTAR-----LLQVLKK 120 + +KA LL + A+ + SQ I VRI + P R LL+ + Sbjct: 72 YAESKKALALLEE--AVNQITLAESQEIAGNVRISM------PNVVGRNLVFPLLKSFNE 123 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P +I + + N D + + + ++ G + IG I+ +P + Sbjct: 124 DYP--KIHLELDFDNKAID-FVKAGFDFVLRVGES--SEGSLVARHIGMIQTCLVASPAY 178 Query: 181 PLA-FVPEPIA---ESQLRL--YPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQC 234 + VP+ +A + QL + PN ++ LH Q +++ D + Q Sbjct: 179 LKSQGVPKNMADLPQHQLLMTRLPNGKLQPWTFNEQGDNVHFLHAQPHLVLTDAEMQTQA 238 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVT 260 + G GI LP Y+ + LVT Sbjct: 239 AVQGFGITQLPVYLALPYLQNGELVT 264 >UniRef50_A6VRP1 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRP1_MARMS Length = 315 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 67/269 (24%), Positives = 122/269 (45%), Gaps = 8/269 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S+ + L AF GSF AA+ + T IS +K +E + LF R++ Sbjct: 8 VESVMKLDQLRAFIAVVETGSFRSAADSIHKTQPGISAAVKALEEQYGISLFDRNSYRPT 67 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G FF ++ L++ ++ ++QG EA +++C++Q+ R ++ ++ Sbjct: 68 LTAEGHAFFLQSKKLMSQVLQLENLGHDLAQGTEAPLQLCLSQMALDDNCMMR-IKAFQQ 126 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q + +TT+ GV + + ++ IAIG L D + EI I ++P+ Sbjct: 127 QHADVTLDITTDHLYGVQEKLAKDKCEIAIGPRYGLDDRHA--FIEINKITMITVMSPE- 183 Query: 181 PLAFV---PEPIAESQLRLYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 LA V I + QL P I+V +T A+T ++L + V DF K + Sbjct: 184 LLATVNTSDTKIKQQQLYSIPQILVTNTAANTSGNGHRYVLPTGKRWYVNDFQIKKNLLL 243 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHN 265 G G +P + ++ + L+ ++ N Sbjct: 244 HGFGWARMPKHYIQSELDNKQLIPIEVEN 272 >UniRef50_Q6MID3 Transcriptional regulator, LysR family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MID3_BDEBA Length = 255 Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 8/222 (3%) Query: 40 IKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI 99 ++ +E L +F+R LT GR F +KA DL+ F + + + +G E +R+ Sbjct: 1 MRTLEGELGFKIFSRDQYRPTLTPQGRAFLKKADDLILQFTELGETAELLKRGHEPIIRL 60 Query: 100 CINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDG 159 ++ L P + L+ +FP +I + +V + + ++ + A+I++G T+ + Sbjct: 61 AVSALWPLP-NLVSALKEFSSRFPQTEIKIIHDVLSAD-EHLLEDHADISLG---TIFND 115 Query: 160 GGIDYT-EIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH 218 G+ T E+ + + HPLA + + E L+ YP I++ T + N+ G +++ Sbjct: 116 KGLLITEELFTVNMVMVCSAKHPLAKLKKTTTED-LKKYPQIVLSSTVKSSNRS-GGVVN 173 Query: 219 GQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVT 260 +I V D TK G G G +PD+ V+E + Q LVT Sbjct: 174 PANTISVQDLQTKKAFLEGGLGYGRMPDFAVKEEIKQKSLVT 215 >UniRef50_B1ZXA6 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobia RepID=B1ZXA6_OPITP Length = 305 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 14/243 (5%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A SF+KAA+ GLT SA++ ++ MET L + LF R+TR++ELT +GR +R+A Sbjct: 18 FHLVAEHRSFTKAAQAAGLTQSAVTRQVQGMETSLGLELFERTTRTVELTPAGRALWREA 77 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQ---LLYTPKHTARLLQVLKKQFPTCQITV 129 L+ D RR G + +R+ +++ L Y P ++ P V Sbjct: 78 ARLIGDLDQTLRRFREEFNGAKKVIRVGVSRSVGLAYLPG----FFHANLRRLPRVGYRV 133 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGG---GIDYTEIGAIRWAFAIAPDHPLAFVP 186 + E + D + N+ ++ + P L +++ + + A +P A P Sbjct: 134 SYEPSTAILDGLERNELDVGVMCPPRRLPRTVRVTHRFSDAFTLIASAEAAASYPGAEAP 193 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKCQCQILGEGIG 242 + +M+++ A+T + WL +I L+P F+ LG G+ Sbjct: 194 RADRMGWAQQQNWLMLDEGANTGRQLRAWLARQGATIEPGMLLPGFDLIINLAALGMGVA 253 Query: 243 FLP 245 F+P Sbjct: 254 FVP 256 >UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=C7CM24_METED Length = 307 Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 61/255 (23%), Positives = 113/255 (44%), Gaps = 4/255 (1%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELTES 64 T + L F T GSF+ A L TS +SYTI +E L + LF R +TR +LTE Sbjct: 8 TLDQLRVFLTVVETGSFAAAGRRLNRATSVVSYTIANLELQLGLSLFDREATRRPQLTEG 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +A + + A++ ++ + G+EA + ++ +L L + FPT Sbjct: 68 GRAVLAEARTVAHGIDALRAKVSGLLGGLEAELGF-VSSVLMPGARLVDALTAFQAAFPT 126 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + E + + +A++ I D ++ +G + AP+HPLA Sbjct: 127 VSLRLNVEALGAAQQFVTDGRADLGITVELWTRDSDPLELISVGEVEMLPVAAPNHPLAG 186 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + R + +++ D + +++ + + + + D +TK + G G G + Sbjct: 187 A-DGLVPGAAREHVQLVITDRS-PLSQDQEFGVVASRTWRLSDLSTKHTLLLAGIGWGSM 244 Query: 245 PDYMVREAMTQSLLV 259 P +MV + LV Sbjct: 245 PAHMVEADIAAGRLV 259 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 78.6 bits (192), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 9/182 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F + L F A GSF AAE + L++ A+S I ++ET L LF R+TR +ELT Sbjct: 6 FDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTPL 65 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQ--LLYTPKHTARLLQVLKKQ 121 GR F +A L+D + I I+ RV + C+ L + P ++ + Sbjct: 66 GRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAALYFLPT----VVSNFSQH 121 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P ++ V E N V ++++ +++ IG +TL+ I + I + A+ +HP Sbjct: 122 YPGIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLVP--EIAFESIHNDPFVLAMRREHP 179 Query: 182 LA 183 LA Sbjct: 180 LA 181 >UniRef50_B6R8I7 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8I7_9RHOB Length = 297 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 3/196 (1%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L AF TAA GSFS AA LG SA+S I +E L+ LF RS+ ELT SG Sbjct: 5 DQLEAFVTAAELGSFSAAARRLGKAQSAVSAAISNLEIDLESDLFDRSSYRAELTVSGVS 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 A +L + + +S+G E +++ Y +L KQFP ++ Sbjct: 65 LLDYAKSILQSRQDLLVKAGALSEGAEGSLKVVFEYGTYVSA-INEVLHDFDKQFPKVEL 123 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 V T + GV+ + + A + I + G + +G R DHPLA + E Sbjct: 124 HVQTTSFGGVFSRLADESAQLGI-IIERHPYKEGFHFRGLGFERRIAVCHKDHPLAEL-E 181 Query: 188 PIAESQLRLYPNIMVE 203 + LR Y I+ E Sbjct: 182 EVRLVDLRGYRQIISE 197 >UniRef50_B8CUJ1 Transcriptional Regulator, LysR family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUJ1_SHEPW Length = 293 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 4/291 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELT 62 + T E L A GSFS A E+G++ SA++ I+ ME L++VLF R + ++ +LT Sbjct: 2 LVTPERLTYLVLVADKGSFSAAGREMGVSPSAVAQVIQNMEIDLNIVLFDRVAGKAPQLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G+ + +A +++ A+++R GIE ++ I + P + + + L +F Sbjct: 62 AVGKAMYLQALEVIPRLQAMEKRAQAFQAGIEDKLNIAVYGFTLFPTYVEK-IAALSNRF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P I + A N A+I I AP L G D I + W +P HPL Sbjct: 121 PELIINLMDVEDITALSADDVNAADIII-APTQLKQRHGYDTQIIDQLDWLVVASPSHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + + L + ++ + V L + F + G G Sbjct: 180 AKLKSRLTYQDLISHRQVITAENLFAEKHLVESLRLSPNLLYCSQFYQIESMLLNGLGFA 239 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQF 292 P ++ + + LV ++ + Q + S + G +W +QF Sbjct: 240 LFPSHLAEKHFAANALVELKMEDSEQQPGWPIELVWSPSLGPAGRWFVEQF 290 >UniRef50_A6CXR5 LysR, substrate-binding protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CXR5_9VIBR Length = 295 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 3/199 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELT 62 + E L A GSFS AA +L ++ SA++ ++ ME + + LF R + +S LT Sbjct: 2 LLNTERLQYLVCIAETGSFSAAARKLNVSASAVNQAVQAMEIDIGIRLFERVAGKSPSLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G+ + +A +++ AI+R+ + G E + I + + P+ T L+ L QF Sbjct: 62 PEGKALYFQALEIVPRLQAIERKARALQSGEEPSLTIATHSMTLYPRFT-ELMSSLTLQF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + + + + A+I I AP L G + I I W F +P+HPL Sbjct: 121 PELELILVDAEKHQLSTNDESLGADIMI-APGGLCPQRGSNAQIIDNIEWCFITSPNHPL 179 Query: 183 AFVPEPIAESQLRLYPNIM 201 A + I L YP ++ Sbjct: 180 AKLKGEITPEDLEHYPQLL 198 >UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2_9RHOB Length = 284 Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 68/283 (24%), Positives = 122/283 (43%), Gaps = 16/283 (5%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F AA GSFS A LG SA+S I +E L LF R+TR +LTE+G A Sbjct: 2 FIAAAESGSFSAAGRTLGKGQSAVSTGIVNLEVDLGFELFDRTTRKPQLTENGERMLTYA 61 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 +L + D+I G E VR+ ++ L P + L++ ++FP +I + + Sbjct: 62 RAVLMQVDNMTTAADSIFSGEETSVRLMLDDALLLPSLSQFLIE-FGERFPATRIDLLSG 120 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGG----GIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 V + + +QA+I + + GG G++ IG + + P+HPL + E Sbjct: 121 VSPDIPSIVAQDQADIGL-----MFSGGSVQKGVEQVFIGNLPFVSVCVPNHPLTKLTE- 174 Query: 189 IAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYM 248 I ++L + +++ ++ + L + F+ + + G G +LP+++ Sbjct: 175 IGANELLSHRQLLLRSPQGSVLAQFPEL--STQVWHATSFHALRELVMQGVGWAYLPEHL 232 Query: 249 VREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWI 288 V A+ L + H + +H+ G W+ Sbjct: 233 VSTAIASGQLARLNLRFEHKLWSPPVECIKLKHARMGPAVSWL 275 >UniRef50_C8Q1Z8 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q1Z8_9ENTR Length = 296 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 74/293 (25%), Positives = 126/293 (43%), Gaps = 13/293 (4%) Query: 11 LAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFR 70 + F AR GSFS AA + + S+++ + +E +V LF RS R I LT G Sbjct: 1 MTFEQVARSGSFSAAARVMKRSQSSVNMAMSNLEDEFNVSLFVRSPRQISLTPEGNTLRE 60 Query: 71 KATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVT 130 +L A+++R+ + EA V + I ++ YT A +L FP I V Sbjct: 61 YVKTVLEQCNALEQRVSAFNIATEAHVSLAI-EVPYTT--VAAVLYEFAMHFPDVDIHV- 116 Query: 131 TEVYNGVWDAII-NNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 E + G +A++ N+ ++ I +D I++ ++G + ++ HPLA P+ Sbjct: 117 REPFQGDVEAMVRKNEVDVGISMARP-VDSDTIEFAQLGKLIMVHVVSSQHPLA-QRLPV 174 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 + + L + +I + TI+ L + V +N I G G LP V Sbjct: 175 SFADLHRWRHITFGEQQKTISTTE--YLGSPMTWRVESYNAMIDAAIAGLGWASLPRIFV 232 Query: 250 REAMTQSLLVT-RQIHNPRQDSRM---LLATQHSATGQVTQWIKKQFAPNGIL 298 + + Q +L RQ P D + LL ++ G+ W+ + N I Sbjct: 233 QRELEQGVLTELRQQEYPHTDWIVGVDLLWSRKKKPGRALSWLIDRLIKNKIF 285 >UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT2_9RHOB Length = 297 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 66/243 (27%), Positives = 108/243 (44%), Gaps = 7/243 (2%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GS AAE L T AIS +K +E LF RS +ELT G+ + ++ +L + Sbjct: 16 GSVKTAAERLNRTQPAISQALKALEFQTGTELFDRSGYRLELTPVGKRVYLQSLRVLTEA 75 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 + + I +G E + I ++ T L + L+ FP ++ + EV +G + Sbjct: 76 EDLGQLIHHFEKGQEETITIAVDATTNLNALTPVLCK-LQTGFPETRVVLRPEVLSGAIE 134 Query: 140 AIINNQANIAIGA-PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYP 198 A+ A IAI +L+ G DY +G +P A + P + LR + Sbjct: 135 AVKTGTAAIAISPMSSVMLEEEGFDYIPLGTSTLRNVTSPSL-WAEMDNPKRLADLRRFH 193 Query: 199 NIMVEDTAHT---INKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQ 255 ++ D+ ++++G + GQ V D TK I G G G LP++M+ E + Q Sbjct: 194 QVIASDSGQAGGLFDREIG-VQKGQRRWYVSDLQTKKHLLIAGLGWGRLPEHMIAEELKQ 252 Query: 256 SLL 258 L Sbjct: 253 GRL 255 >UniRef50_C4LEH9 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEH9_TOLAT Length = 318 Score = 77.4 bits (189), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 17/265 (6%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E F +G +++AAE+L + S++++ I +++ L V L R LT++G Sbjct: 7 TLEQWRIFQAVVEYGGYAQAAEKLNKSQSSLNHAIAKLQQTLGVALLEVRGRKAYLTDAG 66 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 F R+A L + ++ I QG EA +R+ + + P+ L + L+ +P Sbjct: 67 DMFLRRAKLLNQNMQELELLAHNIHQGWEAEIRLAVE--IAHPRRP--LNRALQNYYPIS 122 Query: 126 Q---ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 + + + V G + I ++ANI I L G + + + P HP+ Sbjct: 123 RGTHLQLFDSVLGGTEEFIQEHRANIVIAG----LVPKGFLGEPLSEVTFLPVCHPQHPM 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + +L + I++ DTA + GW L ++ V +F+ + + G G Sbjct: 179 ALETGLLTSEELSQHLQIVIRDTAKNPKELTGW-LKAEQRWTVTNFHEAIETILSGMGFA 237 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPR 267 ++P ++V + + +Q+H R Sbjct: 238 WIPQHLV-----EGFIQRQQLHRIR 257 >UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=B8EMI3_METSB Length = 307 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 61/260 (23%), Positives = 114/260 (43%), Gaps = 11/260 (4%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L F GSFS AA L SA++Y I+++E LDV LF R+ LTE+GR Sbjct: 9 DQLQVFLAVVDEGSFSAAARSLKRAQSAVTYAIQKLEEQLDVRLFDRAAYRPALTEAGRA 68 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A + ++ A++ D I+ G E +R+ ++ ++ L+++ +FP Sbjct: 69 LLPRARLVADEMQALRSHADAIAAGAEPELRLVVDA-MFPMDRLVEALRLVSARFPFSPP 127 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG----IDYTEIGAIRWAFAIAPDHPLA 183 + + + ++N I + LL+ + ++ I AP HPL Sbjct: 128 RIYVDSMGAAAELVLNGVCAIGL-----LLEFSSSFEQLQRDKLIDIAMIPVAAPIHPLG 182 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P++ +LR + +++ D + ++ + ++ + + D K G G G Sbjct: 183 GAESPVSIEELRPHVQLVLSDRS-GLSGDRDYGVYSTRTWRIADLGAKHAMLKAGLGWGS 241 Query: 244 LPDYMVREAMTQSLLVTRQI 263 LP ++V E + L QI Sbjct: 242 LPAHLVAEDLANGRLRRIQI 261 >UniRef50_Q0KAS3 Transcriptional regulator, LysR-family n=3 Tax=Burkholderiales RepID=Q0KAS3_RALEH Length = 317 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 72/268 (26%), Positives = 117/268 (43%), Gaps = 37/268 (13%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + ENL F AR GSFS A G S+++ I +E + V LFTRSTR++ Sbjct: 1 MEFVRFAENLATFVDVARAGSFSAVARRKGQVASSVARQIDALEREMGVALFTRSTRALV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLK 119 TE+G F +AT +L + + + + QG+ R+R+ C+ + +H L L Sbjct: 61 RTEAGDLLFERATRILQELNETRDAVTALEQGVSGRLRVACLPA--FARRHVVPHLGSLY 118 Query: 120 KQFPTCQITVTTEVYNGVWDAIINN-QANIAIG--APDTLLDGGGIDYTEIGAIRWAFAI 176 Q+P +TV E+ + V D ++ I +G A +L+ I + R+ Sbjct: 119 AQYPG--LTVELELTDRVVDPVLERFDVVIRVGQQADSSLI------ARRIASQRYIVCA 170 Query: 177 APDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVP---------- 226 P + L P+ +L + I D AH+ + + GW +L P Sbjct: 171 TPAY-LQAHGRPLHAEELAHHRLI---DRAHSTSMR-GW-----REVLRPAHAASAAFAM 220 Query: 227 ---DFNTKCQCQILGEGIGFLPDYMVRE 251 D + + + G GI +PD+ V E Sbjct: 221 ECDDCDARRLSVLQGLGIALMPDWSVGE 248 >UniRef50_B7VQ88 Hypothetical transcriptional regulator n=7 Tax=Gammaproteobacteria RepID=B7VQ88_VIBSL Length = 288 Score = 77.4 bits (189), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 25/297 (8%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A GSFS +A LG SA+S I +E +V LF RSTR LT++G F++ Sbjct: 2 FVYAVELGSFSASARHLGKVQSAVSQGISNLEIDFNVELFDRSTRKPSLTKAGEQLFKQV 61 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 ++ + + + G E ++I ++ L P + +++L +QFP ++ + Sbjct: 62 KAIVLQVEDLNVTVSAMGSGEEGLIKIALDDSLLVP-NLSKILSQFSQQFPATEVELVAC 120 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL-----AFVPE 187 V II +A+I + + D G + IG + + P H L A + + Sbjct: 121 TTTEVNPLIIEERADIGLMFTNLAFDVGS-EPCFIGHLPFIAVCHPSHSLAKTGVAKLSD 179 Query: 188 PIAESQLRLYPNI-MVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG--FL 244 + QL L + V D I KV W S +V + +LG IG +L Sbjct: 180 LLPHRQLMLRGDKGKVMDQFPLIAGKVWW----SNSFIV------IKEMVLGSDIGWAYL 229 Query: 245 PDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 P ++V E + + LV + H L+ ++ + G W+++ A G+L Sbjct: 230 PKHLVEEELNKQRLVEINVSFDHKTWSPPVDLVLSKTRSKGPALLWLEQ--ALKGLL 284 >UniRef50_C1DLB3 LysR family transcriptional regulator protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLB3_AZOVD Length = 300 Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 18/258 (6%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E+L A R G F +AA+ L SA+SY ++++E L + L R + LT +G Sbjct: 6 ESLAALDAVVRHGGFGRAAQHLHKVQSAVSYQVRKLEEQLGLALLDREGYRVRLTPAGET 65 Query: 68 FFRKATDLLND---FYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 + LL + F A+ R+ + G E R+ + + +L + L + + PT Sbjct: 66 LLAEGRRLLGNAARFEALARQ---FTDGWEPRLLLVADGILSLDAVLSALKTLADEHVPT 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ V E GV QA++ I PD L + I +PDHP Sbjct: 123 -RVQVKIEFMFGVQYRFEKEQADLMIVKDYEPDRQLHA-----EPLPEIECVLCTSPDHP 176 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA V E + + L + + V+D++ + + + G + F+ K Q +G G Sbjct: 177 LAAVGE-VDLALLHEHVELTVQDSSDRGDDR--HMFGGDRVYYLSGFSAKQQALHMGLGY 233 Query: 242 GFLPDYMVREAMTQSLLV 259 G++P YMV + + + LV Sbjct: 234 GWMPLYMVADELARGALV 251 >UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=Coxiella burnetii RepID=A9KDX5_COXBN Length = 294 Score = 77.0 bits (188), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 112/254 (44%), Gaps = 16/254 (6%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF A G F+ AA++LG++ +A+S+TI+ +E L LF R TR+I LTE G F + Sbjct: 11 AFLCVAESGGFTPAAKQLGISKAAVSHTIRLLEESLRTPLFVRDTRNIRLTEEGELLFSQ 70 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 L + A + + + +R+ N + H LLQ ++FP ++ + Sbjct: 71 CKRLKEELDAARNLVAGFNSSPSGTLRMSCNP-YFAETHLFDLLQTYTQRFPKVKVELLV 129 Query: 132 EVYNGVWDAIINNQANIAIG----APDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF-VP 186 E + + +I G AP G+ I R+ +P + F +P Sbjct: 130 E---ERMPNMEREKIDIVFGINWPAP------SGVVAKTIDKTRYVLCASPKYLNKFGIP 180 Query: 187 EPI-AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + + A Q R P++ +N K L+ + + + + +C + G GI L Sbjct: 181 KTVKALEQHRYIPHLGRSPENVIMNLKNKVTLNLTPQLKLNNAHLIKKCALNGLGIIQLH 240 Query: 246 DYMVREAMTQSLLV 259 DYMV+E + LV Sbjct: 241 DYMVKEELANGSLV 254 >UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=Q0K871_RALEH Length = 305 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 71/306 (23%), Positives = 126/306 (41%), Gaps = 26/306 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ + L F GSFS AA LG T S +S + +E L V LF RS+R+ LT + Sbjct: 3 FSLDQLQVFALVVETGSFSAAARRLGKTQSTVSAAVANLEIDLGVPLFDRSSRNPALTGA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTAR-LLQVLKKQFP 123 GR +A +L +++ +++ + + I P H +L +++FP Sbjct: 63 GRKLLTEAEAVLERCRSLQAHAASLADANPPGLTLAIE----IPYHAVMPVLAEFEREFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIG------APDTLLDGGGIDYTEIGAIRWAFAIA 177 +T+ VY V + ++ +A + I AP+ + + ++G + + Sbjct: 119 YVDLTIRNPVYGDVSELVLQGEAELGIAFAQPHYAPE-------LAFVQLGKLIMVHVVH 171 Query: 178 PDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P HPLA E ++ + L Y + +AH L + + Sbjct: 172 PGHPLAGR-EQVSFADLHAYRRLAF--SAHADKLPTSEYLRAARVWRAESYLALVEMVKS 228 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN-PRQD----SRMLLATQHSATGQVTQWIKKQF 292 G G LP +VR A+ + LV + P D ++ A G+ QW++++F Sbjct: 229 GLGWATLPRQLVRAALERGELVELDLAAYPYTDWLVSVDLIWAKSGRPQGRAEQWLRQRF 288 Query: 293 APNGIL 298 N + Sbjct: 289 RENMVF 294 >UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PA71_VIBFU Length = 298 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 60/254 (23%), Positives = 108/254 (42%), Gaps = 33/254 (12%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F + A+ SF+K AE+ ++ +AIS IK +E L V L R+ R +ELT +G F+ A Sbjct: 9 FLSVAQLKSFTKTAEQFFISQTAISQQIKALEHELGVTLLHRNNRIVELTAAGEVFYSDA 68 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH----TARLLQVLKKQFPTCQIT 128 +++N+ +A K R+ + GI+ + + + P H A +L K+ P +I Sbjct: 69 KNIINNIHASKERVANAAMGIQGSLNVG-----FLPMHGDTLLADILGDFYKKNPLIEIN 123 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 + + ++ A+ + Q ++ L + IDY + I + H L Sbjct: 124 IADDNITQLYKALFDGQLDVIFTIDYELENYPSIDYLNLPPIPLYAVVNKTHRL------ 177 Query: 189 IAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESIL---------------VPDFNTKCQ 233 S L+ P ++ + A + L +G + ++ VP F Sbjct: 178 ---SNLKSLPIDLLSEEAFIVISYSNNLPYGVDRLIKICDSGQFVPKIKHKVPSFEAALV 234 Query: 234 CQILGEGIGFLPDY 247 G G+ LP+Y Sbjct: 235 MVEAGLGVAVLPNY 248 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 87/179 (48%), Gaps = 11/179 (6%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L AF T A+ SF++A+E L L+ A+S IK ME LF+RSTRS++L+ GR F Sbjct: 27 QLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQLSPEGRQF 86 Query: 69 FRKATDLLNDFYAIKRRIDTISQGI---EARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 A LL D+ + D + + + ++R+ + + L ++++P Sbjct: 87 LPVARRLLADW---DQAFDDLGRAFNLQQGKIRVAVMP-SFAMNQFPEALAPFQREYPDI 142 Query: 126 QITVTTEVYNGVWDAIINNQANIAIG-APDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I+V V V DA+ Q + I PD + G+++T + RW + P PLA Sbjct: 143 NISVEDVVMESVIDAVREGQVELGITFEPDQM---DGLEFTPLFTDRWIALVHPKSPLA 198 >UniRef50_B9JTU6 Transcriptional regulator LysR family n=3 Tax=Proteobacteria RepID=B9JTU6_AGRVS Length = 304 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 119/276 (43%), Gaps = 37/276 (13%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+++ +L F R GSFS A G+ S+I+ I +E LF RSTR++ Sbjct: 1 MDTVNYTHHLSTFVDVVRAGSFSAVARRQGMKPSSIARKIDMLEDYFGAALFVRSTRALM 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLK 119 LT+ G +A +LN+ A++ I +I ++ +RI C+ + H L L+ Sbjct: 61 LTDVGEVLVARAEVILNELNAMRVEIKSIKDNLDGPLRISCLPT--FGKLHILPWLPKLR 118 Query: 120 KQFP--TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIA 177 + FP T ++ +T + N +I A + IG L+ G+ IG RW + Sbjct: 119 ENFPRMTVELDLTERIAN---PSIERLDAVLRIGP----LNDSGLYAKTIGVQRWLVCAS 171 Query: 178 PDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKV----GWLLHG-----QESIL---- 224 P + + +P SQL H I K+ G HG Q S + Sbjct: 172 PAY-VGRSGKPAGWSQL----------AGHAIVDKLHDPAGICWHGALDPQQYSAMSIGF 220 Query: 225 -VPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLV 259 DF+ Q + G G+ +LPD++ +T LV Sbjct: 221 RCNDFDGLRQAALGGLGLAYLPDWVALPDITAGRLV 256 >UniRef50_A9KS97 Transcriptional regulator, LysR family n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KS97_CLOPH Length = 292 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 62/254 (24%), Positives = 118/254 (46%), Gaps = 11/254 (4%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 +N+ F + SFS AA ELG + SA+S I +E L +LF R IELT +G Sbjct: 4 KNIQTFIKVSELKSFSLAASELGYSQSAVSTQISNLEKELGHLLFDRIGHKIELTANGVI 63 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F + ++ + +++ + I +RI + + T ++L +K +P +I Sbjct: 64 FLQYTQNIQLLTEDLHSQLNGCTDDIAGTIRIAMADSICTSIF-PKILSDFQKHYPKVKI 122 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + T V + ++ + +N+ ++ + + E AI F I+ HPLA Sbjct: 123 VIKTGVTSELFTLLTHNEVDMLFTLDFKMQRPDFVILKE-SAINTNFYISSKHPLA-GKA 180 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE------GI 241 + S ++ YP + E+ + KK+ L+ + ++P + Q++ E GI Sbjct: 181 NVTISDIKQYPIYLTEENI-SYRKKLDDLIAEHDEFIIPTYEIG-NVQVIKELILNSFGI 238 Query: 242 GFLPDYMVREAMTQ 255 GF+P+++V + + Q Sbjct: 239 GFIPEFVVEKELAQ 252 >UniRef50_C8QAK2 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8QAK2_9ENTR Length = 293 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 15/244 (6%) Query: 19 FGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLND 78 G F++AAE + + S++SY + ++ L + L R LT G + LLN Sbjct: 18 LGGFNQAAEAMNRSQSSVSYNLSLLQDRLGLALLRIEGRRALLTAQGETLLAQVRPLLNA 77 Query: 79 FYAIKRRIDTISQGIEARVRICINQLLYTPKHTA-RLLQVLKKQFPTCQITVTT--EVYN 135 F+A++ R ++ G+ ++ + ++ + P+ T R+LQ ++Q+P QI +T E + Sbjct: 78 FHALEARAASLHNGVRTQLELVVDNIF--PRQTLFRVLQQFQQQYPATQIQLTEVLEYDD 135 Query: 136 GVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLR 195 + A+ + + D G + + A+ I DHPL +P+P+ E L Sbjct: 136 PLHPAVPDADVMVMTRREDVSGRGQWLMNVDFLAV-----IHRDHPLLSLPQPLTEYDLS 190 Query: 196 LYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMT 254 YP I + + + + VG E +T + + G G+LP + EA+ Sbjct: 191 RYPQIRIGTSRSQAPHASVG----QSEQWFFSTVDTAIEAVMHQVGYGWLPQARIAEALQ 246 Query: 255 QSLL 258 +L Sbjct: 247 LGVL 250 >UniRef50_A9BPP0 Transcriptional regulator, LysR family n=8 Tax=cellular organisms RepID=A9BPP0_DELAS Length = 307 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF +A GSF++AAE LGLT SA+ + R+E L LF R+TRS+ LTE G+ F+ + Sbjct: 14 AFVASAEAGSFAQAAERLGLTRSAVGKAVARLEERLGARLFVRTTRSLGLTEDGQMFYER 73 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVT 130 L D A + ++ + + R+RI +++ H A LL L + P +I + Sbjct: 74 CAQALEDLDAARHMLEAGRREVVGRLRIS-APVVFGRHHVAPLLLELAQLHPRLRIEAS 131 >UniRef50_Q2T002 Transcriptional regulator, LysR family n=103 Tax=Proteobacteria RepID=Q2T002_BURTA Length = 294 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 19/280 (6%) Query: 19 FGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLND 78 GSFS AA +LG S +S I +E L V LF RSTR LT++ R + +L Sbjct: 17 LGSFSAAARKLGKRQSTVSEAIANLEIDLGVTLFDRSTRQPTLTDAARALLPEVQRVLEA 76 Query: 79 FYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVW 138 AI + ++ G EAR+ + ++ Y L L ++FPT + ++ V Sbjct: 77 SEAIDQVAARLAGGEEARLTLVVSD-TYQSSRYEETLAALDRRFPTLEFECQIAEHDDVL 135 Query: 139 DAIINNQANIAIGA-----PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF-----VPEP 188 D I +A + + A P + + +EIG + P HPLA VP Sbjct: 136 DLIQQGRAQLGLMAARSTYPPDIGTATVAERSEIG-----LYVGPQHPLAAHGDAEVPLA 190 Query: 189 IAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYM 248 L N V I L+ G+ L P + + + G G LP +M Sbjct: 191 ALHDARELRLNTYVAPRGERIETG---LVAGRRCWLAPSYLQLMEMAVAGFGWAELPRWM 247 Query: 249 VREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 V + L+ PR+ + ++ G W+ Sbjct: 248 VEHFARERLVELNARGWPRRVPVDAVWSRGQPLGPAGSWL 287 >UniRef50_B1J7T4 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida W619 RepID=B1J7T4_PSEPW Length = 301 Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 29/262 (11%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF AAR +FS+AAE L + S IS ++ +ET L + LF RSTR++ LTE GR F Sbjct: 7 LNAFVEAARQSNFSRAAERLEVKASTISRYVRDLETDLGIALFNRSTRALRLTEGGRTFL 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQ-LLYTPKHTARLLQVLKKQFPTCQIT 128 A +L++ + +++ E R + +N + H L + +FP Q+ Sbjct: 67 VHAQRVLDELEVARAAASSLND--EPRGVLQLNAPPAFARHHIVPALSEFRARFPQIQVD 124 Query: 129 VTTEVYNGVWDAIINNQANIAI---GAPDTLLDGGGIDYTE----IGAIRWAFAIAPDHP 181 +T E +I+ A++AI PD+ L I + W P+HP Sbjct: 125 LTCEESQV---NLIDAGADLAIRLGCLPDSSLKARKIADEQWVLCAAPSLWHEPSGPEHP 181 Query: 182 LAFVPEP-IAESQ-LRLYPNIMVEDT--AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 A + IA SQ L LY + E +HT+ + D + Sbjct: 182 EALADQGFIASSQRLDLYWSHAGETVRQSHTVTLRTN------------DLEAQLVAAQA 229 Query: 238 GEGIGFLPDYMVREAMTQSLLV 259 G+G LP ++V A+ Q LV Sbjct: 230 GQGPVLLPAWLVATAIRQGTLV 251 >UniRef50_A0XZG1 Putative transcriptional regulator with periplasmic binding protein domain (LysR family) n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZG1_9GAMM Length = 316 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 50/207 (24%), Positives = 98/207 (47%), Gaps = 11/207 (5%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F G F+ A+ + + S + + ++++E L + L R LTESG+ R+A Sbjct: 34 FKAVVEHGGFAGASAAVFKSQSTVHHAVQKLEAALQIKLLEVKGRKAFLTESGKLILRRA 93 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ---FPTCQITV 129 L+ + I+ +T+S+G+E+ ++I ++++ P L Q L K +P +I + Sbjct: 94 EFLIEEANKIESVANTLSEGVESTLKIAVDEVFPQPI----LYQALAKTSELYPLLKIDL 149 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 V G + + N ++AI + GI +++ + + +HPL E + Sbjct: 150 IESVLTGANELLNNAVVDLAISSVPIY----GISCSKLTDVEFIAVAHKNHPLNKFEEQL 205 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWL 216 + L+ + I+V D+A N+ GWL Sbjct: 206 SFRDLKQHRQIVVRDSATHTNQDEGWL 232 >UniRef50_B2T3D8 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B2T3D8_BURPP Length = 340 Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 119/254 (46%), Gaps = 24/254 (9%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF AAR+ SFSKAAE L +TT ++S I ++E + + R+TRS+ LTE+ + ++ Sbjct: 7 LRAFVAAARYQSFSKAAESLNVTTGSVSKAIAKLEGCIQTRVLLRTTRSVSLTEAAQPYY 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + LL + RRI + ++R+ ++ +L + + RL++ P + V Sbjct: 67 QSCCRLLEELDEANRRITRSREVDSGKLRLIVHPMLMSETFS-RLVRGYHAIAPNVNLIV 125 Query: 130 TTE-----VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + +Y+G +D I P L++ + + + F AP + L Sbjct: 126 SVQEGAANLYDGRFDMAI---------LPPHLVEQSAVIRRTLSKSQRIFVAAPAY-LEQ 175 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL------- 237 P+ ++L + ++++ + V LL G+ + V ++ +IL Sbjct: 176 YGVPLTAAELN-HHFLLLDTDSRKKGVDVVDLLEGETRVSVSPMSSMDGNEILLRAAAVI 234 Query: 238 GEGIGFLPDYMVRE 251 G GI LP+ MVRE Sbjct: 235 GTGIAALPETMVRE 248 >UniRef50_A9D356 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D356_9RHIZ Length = 306 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 8/264 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++I T + F T GSF+ AA +LG SAI+Y + ++E V LF R+ Sbjct: 1 MDAI-TLDQFTVFLTIIEEGSFAAAARKLGRAQSAITYAVHKLEDQCAVQLFDRTAYRPV 59 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR + ++ D + + ++SQGIEA + + + ++ A L Sbjct: 60 LTEQGRALLPRVRRIMEDLGEFRIQAKSMSQGIEAELVLVVETFIHL-SMVAPALSAFHV 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIG--APDTLLDGGGIDYTEIGAIRWAFAIAP 178 +FP Q+ + + + + A++ + AP D + E+ + A AP Sbjct: 119 KFPMVQLKIISVRPQDASRQLQEHDADLGLFMLAPKPQTDLESLLVAEMDFLAVA---AP 175 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 DHPLA +P + +R + I+V + + + ++ G V + + G Sbjct: 176 DHPLAKLPPHFPKEAMRDHLQIVVSNPKAPDDATIYGVV-GVNQWRVSEVRLRYDLIKQG 234 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQ 262 G G +P MV + + LV Q Sbjct: 235 VGWGSMPRPMVEADLARGDLVVLQ 258 >UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZZ2_9PROT Length = 293 Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 9/259 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L A G F AAE L + SAIS +K +E L + LF R LT Sbjct: 1 MTLDQLRALCAVVEKGGFHAAAEALYRSQSAISIAVKNLEQELGLSLFDRKGYRPVLTPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + KA +L+ + ++G E + I ++ + + +++ + + P Sbjct: 61 GHVLYGKARSILSRSEDMSSIASHFARGEEPEISIALSAIAPV-EQVLDVIKQISQSAPA 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE---IGAIRWAFAIAPDHP 181 ++++ E G + + + AI ++Y E + + + I+PD P Sbjct: 120 TRMSLQVENMGGTLERLQEKDVDFAIAEQFV-----PVEYAEQVRLTSTQMIPVISPDFP 174 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA I S L Y ++V DT+ K+ +L G LV DF+ K + + G G Sbjct: 175 LATRYPAITLSDLEAYVQVVVRDTSRNQPKRSAGVLEGAPQWLVNDFDMKKRMILSGAGW 234 Query: 242 GFLPDYMVREAMTQSLLVT 260 G +P + V E + L+ Sbjct: 235 GRMPRHRVAEELADGRLLA 253 >UniRef50_A8GHE2 Transcriptional regulator, LysR family n=2 Tax=Serratia RepID=A8GHE2_SERP5 Length = 319 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 16/275 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN E+L F A GSFS AA +LG+ S++ + +E+ LD LF RSTR + Sbjct: 20 MNDARYVEHLPIFLEVALLGSFSAAARKLGMVPSSLVRHVDALESALDATLFIRSTRGLM 79 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLK 119 LT++G +A LL+D I+ + ++S + +RI C+ + + LL +L Sbjct: 80 LTDAGEMLQARAATLLSDISDIRAELASLSDRPQGTLRISCLPT--FGKTYILPLLPLLA 137 Query: 120 KQFPTCQITVT-TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 +++P + + TE +++ A I IG G+ + I RW +P Sbjct: 138 ERYPQLFVELDLTERQTDPTQELLD--AAIRIGEQ----KDSGLYASRIATQRWVMCASP 191 Query: 179 DHPLAFVPEPI---AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESIL-VPDFNTKCQC 234 + LA P A + RL + A L+ +L DF + + Sbjct: 192 AY-LARYGRPADLNALPEHRLIARYHKQQPACWAQILSAPLMDRCSLVLRCDDFTAQREA 250 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQD 269 +LG GI FLP+++V + L+ + +PRQ+ Sbjct: 251 ALLGLGITFLPNWVVGPDIQAGRLLP-VLEDPRQE 284 >UniRef50_A8H826 Transcriptional regulator, LysR family n=1 Tax=Shewanella pealeana ATCC 700345 RepID=A8H826_SHEPA Length = 304 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 43/123 (34%), Positives = 65/123 (52%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M F L +F AR GSF+ AA+EL LT S IS IK++ET L L R+TR++E Sbjct: 1 MKPSFNLNLLSSFYAVARHGSFAAAADELCLTHSVISKHIKQLETSLQSQLIIRTTRALE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE G + + K + N+ +K ID + + R+ I + +L A+ L+ + Sbjct: 61 LTEEGEFLYSKCQSIFNEVLQVKDFIDEKKRVVSGRLVIKMPSILKHDDGIAKSLEFMHL 120 Query: 121 QFP 123 +P Sbjct: 121 TYP 123 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 17/187 (9%) Query: 21 SFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFY 80 SFSKAA ++ A+S +K ME L RS + I TE+GR F+ A +++ + Sbjct: 17 SFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEAGRIFYEAAREIVERYQ 76 Query: 81 AIKRRIDTISQGIEARVRICINQLLYT------PKHTARLLQVLKKQFPTCQITVTTEVY 134 A+++++ +SQ + +R+ +YT P + + +Q +P +I + Sbjct: 77 ALEQQMANLSQSVSGTIRVAT---VYTVGLHDLPPYIKKFIQT----YPQARIHLEYSRT 129 Query: 135 NGVWDAIINNQANIAIGA-PDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQ 193 N +++A+ NQ +I I A P +G + + + ++P+HPLA +P+A Q Sbjct: 130 NKIYEAVRQNQVDIGIVAYPQ---EGRQLGVIPLPSDELVVIVSPNHPLARAGKPVALQQ 186 Query: 194 LRLYPNI 200 L P I Sbjct: 187 LHRLPFI 193 >UniRef50_A6CV53 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CV53_9VIBR Length = 294 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 38/242 (15%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + E L F TAA GSFS AA L T +AIS +I +E L + LF RST+ LT Sbjct: 1 MLSTEQLFIFKTAAEQGSFSAAARLLNKTPAAISISISNLEIQLGIDLFDRSTKYPRLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +++ T L+ I+ + +Q +E +V I I++L+ + + LQ L FP Sbjct: 61 AGERLYQQCTLLVRHIERIESAATSYAQQVEDKVTIGIDRLIPSCMIESG-LQKLASDFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG------GIDYTEIGAIRWAFAIA 177 I + V D N Q+ I + D +L +++ +I + A Sbjct: 120 NTAIHI-------VRDTNANLQSRIELHELDLVLQCATAAEPKSLEFFDIALMEMCCVCA 172 Query: 178 PDHPLA--------------------FVPEPIAESQLRLYPNIMV----EDTAHTINKKV 213 PD LA + P Q RL P I V ED + + + + Sbjct: 173 PDSDLADTAIVDNEALLTRRQICCESMIENPSLSLQGRLSPEIWVMTDQEDVLNMVEQGL 232 Query: 214 GW 215 GW Sbjct: 233 GW 234 >UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9W7_9GAMM Length = 306 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 12/253 (4%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 FT A+ SF+KAAE LG+ S +S + ++E L + L R+TRS+ LTE+GR + Sbjct: 18 FTHVAQLASFTKAAEVLGIEKSTVSAKVSQLEASLGIRLLERTTRSVRLTEAGRDYLAYC 77 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 LN I ++S +R C L +L + + F TC V E Sbjct: 78 EQALNTLQQGDDYIHSLSGEPSGTIRFCAPHNL-----IDFILSSVIEPFLTCYPKVNLE 132 Query: 133 VYNGVWD-AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAE 191 ++ D ++ ++AI + + + +W F I+P F P Sbjct: 133 IHQVNGDEGFLSGNYDLAIRNHRGEIKDTSLICRPLFESQWVFVISPKQLDEF-GYPETP 191 Query: 192 SQLRLYPNIMVED--TAHTINKKVGW---LLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 L P+I +++ T T + + W L+ + V + T LG G G +P Sbjct: 192 EHLLSQPSIGLKNASTNKTYDPHLIWQDQKLNFRHRFAVDNMRTVIASIKLGLGFGMVPK 251 Query: 247 YMVREAMTQSLLV 259 MV+E + Q LV Sbjct: 252 NMVKEELAQGELV 264 >UniRef50_A8H1M6 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A8H1M6_SHEPA Length = 292 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 9/262 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E L +F T GSFS AA +LG SAIS I +E + LF RS R LT Sbjct: 1 MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTR 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +A +L + ++ + + ++ + +++ + K TA LL L Q+P Sbjct: 61 AGEQLLPQAKAVLAQHQRLNLQVLALDKQDNLKLTLAVDEGIPYNKFTA-LLSSLSNQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 C++ + + + +A++ I + L +D+ +G +++ + P+HPLA Sbjct: 120 ECELELLCASSLDIIHLVDTKRADLGIVFSE-LTYSESLDFESLGTVKFELLVNPNHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL--LHGQESILVPDFNTKCQCQILGEGI 241 + L+L+ +++ A K+ GW H + ++ + G G Sbjct: 179 QETSSHIDV-LKLHRQLVIGSKA----KQKGWFNTPHSPDVWHADNYYMLLELAKAGFGW 233 Query: 242 GFLPDYMVREAMTQSLLVTRQI 263 LP ++ EA+ L +I Sbjct: 234 ALLPLHLCEEAIAAQQLCKLKI 255 >UniRef50_B7X3R9 Transcriptional regulator, LysR family n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X3R9_COMTE Length = 296 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 15/185 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F +L AF A SF +AAE L ++ A+S ++++E L + L R+TR +EL Sbjct: 3 FDIADLKAFVAVAELASFKRAAELLHISQPALSRRVEKLEQALSLKLLERTTRKVELNAM 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFP 123 GR F +A +L + A + +++ + V I CI ++ T +A + +KKQFP Sbjct: 63 GRVFLPRAQHVLAELEASLIGMTELNERLHGLVTIACIPSVVDTVVASA--IHQIKKQFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIG-----APDTLLDGGGIDYTEIGAIRWAFAIAP 178 ++ + + + + ++ + IG PD +D+ E+ + + A Sbjct: 121 RIRLRILDQPAADILLTVARSEVDFGIGYLGASEPD-------LDFEELASESFVLACRK 173 Query: 179 DHPLA 183 DHPLA Sbjct: 174 DHPLA 178 >UniRef50_B7H1A2 Bacterial regulatory helix-turn-helix protein, lysR family protein n=18 Tax=Acinetobacter RepID=B7H1A2_ACIB3 Length = 297 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 8/247 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 +E LL F GSFS AA +LG SA+S +I +E L++ LF R R T Sbjct: 4 NQEQLLMFQAVMETGSFSAAARKLGKVPSAVSMSIANLEIDLNLTLFERKGREPTPTAEA 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFPT 124 R + K LL + K+ +S G+E + I +++LL+T + + +L+ +FP Sbjct: 64 RVLYEKTAQLLIEMNQWKQHAHALSTGLEPNLTIVVVSELLHT--NWTDYVCLLESRFPD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 QI + + +++ A +A+ LD + E+ I+ HPLA Sbjct: 122 LQINIVSAPQEDALQMLLDGSAQLALMFEREHLDNRE-QFVELKREALIPVISKTHPLA- 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 E ++ Q+ I+V T+ + LL + + ++ C + G G L Sbjct: 180 SQEHVSYEQILGTRQIVVASRDETLKPE---LLFSKHYWRTDNHHSACLMILRNLGWGVL 236 Query: 245 PDYMVRE 251 P M +E Sbjct: 237 PQEMFKE 243 >UniRef50_A4SRE3 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A4SRE3_AERS4 Length = 299 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 11/199 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L AA+ GSFS AA +LG S +S I +E L + LF RS R LTE+G Sbjct: 6 EQLRVLLAAAQAGSFSAAARQLGKAQSVVSTAIANLEIDLGLELFDRSARYPVLTEAGTR 65 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 ++AT LL ++ ++ G+E+R+ + I+ + P LL+ ++P ++ Sbjct: 66 IHQEATILLAQSERLQAIAGELAAGVESRLTLAIDDDSHLP-WLGSLLEEFATRYPGVEL 124 Query: 128 TVTTEVYNGVWDAIINNQANIAIG----APDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + V + + + +A + I P+ L +G+++ ++PDHPLA Sbjct: 125 ELLFPLMEDVTELLKSGRAQLGISYQKERPERELAS-----CSLGSVKMPLVVSPDHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMV 202 P+ ES L+ +MV Sbjct: 180 R-KTPLRESDLQGARQLMV 197 >UniRef50_D2BW38 Transcriptional regulator, LysR family n=19 Tax=Proteobacteria RepID=D2BW38_DICD5 Length = 315 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 67/258 (25%), Positives = 116/258 (44%), Gaps = 24/258 (9%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F ++L F AR GS +K A +T SA+S + +E +D VLF R R + LT + Sbjct: 7 FDLQSLRLFLQVARIGSLTKTAAHFHMTLSALSKRMAELERTVDCVLFIRMPRGLALTAA 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQ---LLYTPKHTARLLQVLKKQ 121 G+ A ++N + + + G+ V I N + + P+ A LQ + Sbjct: 67 GKELVHHARQVVNSVDRMAGEMQDYAVGVRGHVHIWANTSAIIEFLPQELADFLQ----R 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 P +I + ++ V A++ QA+I I A + + G++ + ++P HP Sbjct: 123 HPLVRINLEEKLSETVVTALLTGQADIGIFADN--VPSPGVEKMPYREDQLVVLVSPQHP 180 Query: 182 LAFVPE-PIAESQLRLYPNI--------MVEDTAHTINKKVGWLLHGQESILVPDFNTKC 232 LA + P A++ + + +++DTA ++ G LL + I V F+ C Sbjct: 181 LAGCRDIPFADTLPYDFVGLNDGSSLLKLLQDTA----EEYGNLL--RLRIQVSSFDAVC 234 Query: 233 QCQILGEGIGFLPDYMVR 250 + G GI LP+ VR Sbjct: 235 RMIEAGLGISILPEGAVR 252 >UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q1QPF6_NITHX Length = 309 Score = 73.9 bits (180), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 7/260 (2%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L F AA GSFS AA + T SA+S I +ET L VVLF R+ R +LT G Sbjct: 8 DQLRMFVAAADEGSFSAAARRVRRTQSAVSEAILSLETQLGVVLFDRAGRYPKLTTDGVV 67 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 A +++ A+K R I+ G+EA + ++ L + A + + QFP + Sbjct: 68 LLADARAVISGVDAMKARAKGIAGGLEAELTAVLDVFLPI-EVIAEAAREFRIQFPATPL 126 Query: 128 TVTTEVYNGVWDAIINNQANIA-IGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + E G +++ +A+I +G+ TL G+ + ++ A HPLA Sbjct: 127 RIYVEALGGAVQPVLDGRASIGVVGSLPTLPP--GLIKERLFDVKLMMVAAASHPLASYR 184 Query: 187 EPIAESQLRLYPNIMVED-TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 I + +L + +++ D + T + +G + + + D K I G G G +P Sbjct: 185 GTIPKEELARHVQLVLTDRSTLTEGRTIGVM--SPSTWHLADLFAKHAFLISGLGFGGMP 242 Query: 246 DYMVREAMTQSLLVTRQIHN 265 + V + + LV I Sbjct: 243 LHTVARDIAKGRLVELSIEE 262 >UniRef50_D0XGW3 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XGW3_VIBHA Length = 346 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 3/173 (1%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF T A +GS S+AA +L + +S IK +E LDV LFTR+ + L+E+G+ F+ Sbjct: 62 AFCTIAEYGSVSEAARQLDCNRTKLSMAIKALEKDLDVELFTRTGNQLTLSEAGKAIFKD 121 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHT-ARLLQVLKKQFPTCQITVT 130 +LL IK+ +S G A V + + L P L L +FP+ + Sbjct: 122 CENLLVTAQRIKKTCAQVSDGFNAEVWVARDDSL--PDELWQELSHTLNNRFPSTTFNLI 179 Query: 131 TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + Q + A G +D I Y +G IR + +H L+ Sbjct: 180 LASSGDLSNLVSTQQVDFAFGVDYERVDDPHIVYNPLGKIRMMSVCSFEHRLS 232 >UniRef50_B2IKQ3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=B2IKQ3_BEII9 Length = 296 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 31/272 (11%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF +AA SF +A G++ SA+ TI R+E L V LF R+TRS++LT G F ++ Sbjct: 9 AFVSAAEALSFVEAGRLHGVSASAVGKTIARLEARLGVRLFHRNTRSMKLTAEGALFLQR 68 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK---KQFPTCQIT 128 +L + A ++ + I + ++R+ + P LL VL +++P ++ Sbjct: 69 CHRILGELDAAEQELSDIRAAPKGKLRVSL------PAIGTMLLPVLSEFIQRYPEVELD 122 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 + ++ +I+ + A+ +T D + ++G +PD+ L V P Sbjct: 123 ID---FSDRKVDLIDEGFDAAVRIGET--DDTRLLSRQLGVFHRHLVASPDY-LEKVGRP 176 Query: 189 IAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL---------GE 239 + ++L +P ++ T K W + G ESIL + C + G Sbjct: 177 ESATELPRHPCLLYR--FPTTGKIEPWPVPGWESILSSRELSTVSCNSIETLTYLALEGR 234 Query: 240 GIGFLPDYMVREAMT----QSLLVTRQIHNPR 267 G+ LPD+ V+ A+ + LLVT ++ PR Sbjct: 235 GVACLPDFEVKSALADNKLERLLVT-EVSTPR 265 >UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VGW8_DESVV Length = 306 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 17/195 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E + AF AAR GSFS AA ELG SA+S I +E L V LF R+ LT Sbjct: 3 YSWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A LL R T++ G+E R+ + +++L + P RL +++P Sbjct: 63 GEALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDRLTG-FAERWPD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAP----------------DTLLDGGGIDYTEIG 168 ++ + + + +A++ I P D G+DY G Sbjct: 122 VEMEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAG 181 Query: 169 AIRWAFAIAPDHPLA 183 A+ +A HPLA Sbjct: 182 AVPALPVVAAGHPLA 196 >UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida W619 RepID=B1JAA5_PSEPW Length = 296 Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 4/180 (2%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L AF+ SFS AA +LG + SA+S ++ +E L + LF RS R +LT GR Sbjct: 6 EQLAAFSAVVSERSFSAAARKLGKSQSAVSISVGNLEIDLGITLFDRSQRYPQLTNEGRA 65 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHT-ARLLQVLKKQFPTCQ 126 R A +L ++ R +++Q +E + I I++ + P + A +L+ ++FP Sbjct: 66 LLRDAEAILGQCCNMESRASSLAQALETELVISIDEAI--PYQSLAPVLEEFSRRFPHVD 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 +TV V I + + +A+ T + + +G+I ++ + HPL +P Sbjct: 124 LTVLHPCGQDVLTMIEDKKLLLAMMCTRTHYP-RNLQFIRLGSITFSNVVGRQHPLVAMP 182 >UniRef50_A6VKL9 Transcriptional regulator, LysR family n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VKL9_ACTSZ Length = 292 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 63/229 (27%), Positives = 104/229 (45%), Gaps = 23/229 (10%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 LL F + GS S+AAE LG+T SA+S ++ +E + L R+TR +ELTESGR + Sbjct: 7 LLIFNEVIKKGSMSRAAESLGMTASAVSQHLQNLEAYYGLKLLNRNTRRLELTESGRILW 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 ++A+ L + ++ + VR+ + L K LL+ +++ P Q+ + Sbjct: 67 QQASKLADVMTETHEKMTALKAKPSGMVRLSLPTGLVRTKEIRALLKTVEQNLPDIQLVL 126 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIA--PDHPLAFVPE 187 E + ++ A+IAI A D + Y W+ IA PD+ Sbjct: 127 LAE---DTMAQLQHSTADIAIRAGDISDSPDNVVYR---LAEWSLCIAASPDY---LTRT 177 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKC 232 PI + L TAH +N LL+ E++ +P+ T+C Sbjct: 178 PINQPADLL--------TAHWLNHSDFILLNAFEALNLPKCLPEHRTEC 218 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/248 (27%), Positives = 114/248 (45%), Gaps = 8/248 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + L F T A+ SFSKAAE +T S +S +IK++E L L RS R++ LTE+G Sbjct: 10 TLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTEAG 69 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 KA+ LL D + + + ++ + R R+ + + P R L L+ +P Sbjct: 70 ESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSV-APFLLPRFLPQLRDLYPEL 128 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 Q+ + ++ + A+ + + A+ A D G + EIG+ + A+ HPLA + Sbjct: 129 QLFLREDISRNLMIALREGRIDAALMA--LPYDTTGFESAEIGSDAFYLAVPGAHPLAGL 186 Query: 186 PEPIAESQLRLYPNIMVED----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 E + E L +++ED H + G +L E + +T Q G G+ Sbjct: 187 SEVLME-DLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMVDNGIGV 245 Query: 242 GFLPDYMV 249 +P V Sbjct: 246 TLVPRIAV 253 >UniRef50_D0X470 Transcriptional activator of LysR family n=1 Tax=Vibrio alginolyticus 40B RepID=D0X470_VIBAL Length = 314 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 16/301 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S T E L R GSF+ AA EL S++SY I+++E LD+++F RS Sbjct: 20 VQSPITLEALHILDAIDRRGSFAAAANELDRAPSSLSYQIQKLEQDLDIIIFDRSGHKAH 79 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 TE+G+ + +L + ++ G E + I + ++ P + Sbjct: 80 FTEAGKLILERGRAILQASEKLVNDATLLANGWELDITIAFDGII--PISNFFPMVDALA 137 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAP-DTLLDGGGIDYTEIGAIRWAFAIAPD 179 + + ++ + E+ G W+++ +A++ I DTL + +IG + + + D Sbjct: 138 EVSSTRVRLQEEILAGSWESLNTGRADLLICPSLDTLPQ--EVKSEKIGKMSMYWVASAD 195 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAH-----TINKKVGWLLHGQESILVPDFNTKCQC 234 H + E+ Y I + DTA +IN ++ Q + V +F K + Sbjct: 196 HYVHKRSGKFDEAAREKYRIIAIADTAREQPALSIN-----IIQKQPRLTVTNFTAKVEA 250 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G GIG LP + + + S ++ R Q ++LA + + G+ W + Sbjct: 251 LTAGLGIGTLPS-QIAQPLIDSGVLKRIEGTEEQPMDIILAWRRNTMGEAKSWCIQYLKK 309 Query: 295 N 295 N Sbjct: 310 N 310 >UniRef50_C7JIT8 Transcriptional regulator LysR n=8 Tax=Acetobacter pasteurianus RepID=C7JIT8_ACEP3 Length = 327 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 24/261 (9%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + +L AR GS + AA L LT A+S+ I+++E L+V ++ R RS+ LT Sbjct: 21 GVLERSHLTIIQEVAREGSLTAAAVRLNLTQPALSHAIRKIENLLEVKIWRREGRSLVLT 80 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI------CINQLLYTPKHTARLLQ 116 ++G + A LL F + R+ + G +R+ C LL +++ Sbjct: 81 QAGEWLLSLANRLLPQFELAENRLQQFANGERGTLRVGMECHPCYQWLL-------KVVS 133 Query: 117 VLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAI 176 +++P + V + G A+ +N+ +I + PD L G I +T + + Sbjct: 134 PYLERWPKVDVDVRQKFQFGGIGALFSNEIDILV-TPDPLYKPGLI-FTPVFDYELVLVV 191 Query: 177 APDHPLA----FVPEPIAESQLRLYPNIMVE--DTAHTINKKVGWLLHGQESILVPDFNT 230 P+HPL VPE +A L YP + E D + G+ Q+ I D Sbjct: 192 GPEHPLRGAKFVVPEQLAGETLITYP-VPPERLDIYTQFLQPAGFGPRQQKQIETTDIML 250 Query: 231 KCQCQILGEGIGFLPDYMVRE 251 G GI LP ++V E Sbjct: 251 VMVAH--GRGIAALPRWLVEE 269 >UniRef50_B6EJX0 HTH-type transcription regulator, LysR family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJX0_ALISL Length = 287 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 10/249 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F + L GSFS AA +LG SA+S I +E V +F RSTR LT Sbjct: 1 MFNLQQLETLILCVECGSFSAAARKLGKAQSAVSTAIANLEIDTGVEIFDRSTRLPTLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ + ++ LL+ I+ + + S G+E + I IN+LL TP ++ FP Sbjct: 61 HGKRLYTQSIHLLSQAKDIETMLHSFSLGVEDTLTIVINELLLTPTF-FNVINEFYLYFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + + + +A+I D L ++ +G + + +HPL Sbjct: 120 HTELHINIAENKDISELVAQGKASIGFMLCDDAL-PQKVELGLVGYLPISMVANNNHPL- 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI-LGEGIG 242 + I ++L+ Y I++ N W +H S+ + + Q + + + G Sbjct: 178 HSQDSIHLNELKRYHQILL------TNMHSPWNVHFSSSVTKTNNASALQSLLTVNDSWG 231 Query: 243 FLPDYMVRE 251 F+PD++ ++ Sbjct: 232 FVPDHLTKK 240 >UniRef50_P55576 Uncharacterized HTH-type transcriptional regulator y4mQ n=19 Tax=Proteobacteria RepID=Y4MQ_RHISN Length = 298 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 7/142 (4%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F AAR GSF AAEEL L+ SA+S+ I R+E L V LF R+TRS+ LT +G+ A Sbjct: 13 FEAAARLGSFRAAAEELNLSPSAVSHAIMRLERDLGVALFERTTRSVSLTVAGQTLLNHA 72 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 + N F ++R ++ IS +R+ + RL Q LK+ P ++ V Sbjct: 73 S---NAFEELRRGVEQISSNKAQLLRLHCAPSFAAQVLSPRLPQFLKEN-PGIEVRVAAS 128 Query: 133 V-YNGVWDAIINNQANIAIGAP 153 Y D + + A+I G P Sbjct: 129 TNYARFVDGLFD--ADIVYGEP 148 >UniRef50_D2RMQ6 Transcriptional regulator, LysR family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RMQ6_ACIFE Length = 295 Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 71/272 (26%), Positives = 120/272 (44%), Gaps = 20/272 (7%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 N+ +F A SF+K AE+ ++ S +S I+ +E GL+V LF R TR+I+LTE+G+ F Sbjct: 5 NIHSFVVLAELLSFAKTAEKEHISQSTLSRRIQSLEKGLNVQLFQRDTRNIKLTEAGKEF 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 + +A LL ++ G ++RI I Y + P +I Sbjct: 65 YFQANKLLEQYHLAISLTKKAVGGYSRKLRIGIG--YYEHFFLMPFIGQFSASHPNIKIN 122 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE--IGAIRWAFAIAPDHPLAFVP 186 + VY + + I +I + + L Y + + W+ ++ D+PLA P Sbjct: 123 LYQFVYETLLEYFIRGNLDIILTSDQFLSSISENAYKKQLLWQDSWSLILSRDNPLAAYP 182 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE-------SILVPDFNTKCQCQILGE 239 I QLR I + + + +K + + Q+ I V F K Sbjct: 183 -FIDRKQLRDQTIITMYNGS---SKMIRNIYRNQDFTEPFRTVIQVNSFAAKIALVDANM 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQI---HNPRQ 268 GIGF+P ++ E+ LL ++I +NPR+ Sbjct: 239 GIGFVPSFIKTESYKNVLL--KKIVPAYNPRK 268 >UniRef50_Q2S7W3 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7W3_HAHCH Length = 304 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 66/255 (25%), Positives = 104/255 (40%), Gaps = 3/255 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L F G F AA++ + SAIS TI+ +E + LF R +LTE Sbjct: 1 MTREQLRIFAAVVSEGGFRAAAKKFYRSQSAISKTIRALEEEIGFQLFQRDRYRPKLTEK 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F K +LL F + ++ G E +R+ +N + K L + + + Sbjct: 61 GEAFSGKVNELLLKFSDLDSYTRELAMGYEPVIRVAVNHICPLEKVLPSLRECAAR-YAN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ E G + NQA+IAI + + ++ + I PD+ Sbjct: 120 TQVDFYIETLEGAMQRLQENQADIAITYQERV--HASLEASPFSQIVLKVVATPDYLANL 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + E L I+VED+A + L+ V D N K + + G G G L Sbjct: 178 LRCDNGEPDLCRSTQIVVEDSAIKRLDERYLLVDNGGKWAVNDHNLKKRMILAGLGWGRL 237 Query: 245 PDYMVREAMTQSLLV 259 P + +RE + Q L+ Sbjct: 238 PLHEIREELAQGELL 252 >UniRef50_C6B409 Transcriptional regulator, LysR family n=8 Tax=Rhizobium RepID=C6B409_RHILS Length = 300 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 12/256 (4%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 ++ F A++GSFS+AA LG+ S +S + +E L V L R+TR + LT GR + Sbjct: 6 DIAVFVKVAQYGSFSRAAHSLGMPVSTVSRKVTSLEEQLGVTLIQRTTRKLSLTAQGRAY 65 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 + + ++ L + + + E ++I + +++ + + +K +P Q+ Sbjct: 66 YDRCSEPLAHLLDAEHALTETQRKPEGLLKISV-PVIFGQEVFYEFVSAFQKTYPKIQVD 124 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIG-AIRWAFAIAPDH----PLA 183 + V N D I N ++AI D L I +G ++R+ A APD+ L Sbjct: 125 LF--VTNLFLDLIAEN-IDLAIRFGD--LKDSTIVAQRLGKSVRYLVA-APDYLKGRVLP 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 PE + + Q L E H ++ + LH I DF+ G GIG Sbjct: 179 LKPEELKDHQCVLLNGRNGEAEWHLVSGRKSVRLHVSGPISSRDFDAVSAFTYRGHGIGL 238 Query: 244 LPDYMVREAMTQSLLV 259 LP E + + L+ Sbjct: 239 LPSTYCEEQIRKGELI 254 >UniRef50_Q7ME88 Transcriptional regulator n=60 Tax=Vibrionales RepID=Q7ME88_VIBVY Length = 304 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 16/301 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S T E L R GSF+ AA EL S++SY I+++E LD+++F RS Sbjct: 10 VQSPITLEALHILDAIDRRGSFASAANELDRAPSSLSYQIQKLEQDLDIMIFDRSGHKAN 69 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 T++GR + +L + ++ G E + I + ++ + H L+ L Sbjct: 70 FTDAGRLILERGRTILAATEKLVNDATLLANGWELDISIAYDGII-SIHHFFSLVDALGN 128 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 T ++ + E+ G W+++ + +A++ + P + + IG + + AP+H Sbjct: 129 VSKT-RVRLQEEILAGCWESLQSGRADLLV-CPKLEVLPHDVKADTIGKMSMTWVAAPNH 186 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAH-----TINKKVGWLLHGQESILVPDFNTKCQCQ 235 + ++ Y I + DTA T+N ++ Q + V + K Sbjct: 187 YVHKRSGEFNDTAREKYRIIAIADTAREQPAITVN-----IIQKQPRLTVTNLQAKVDAL 241 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDS-RMLLATQHSATGQVTQWIKKQFAP 294 + G GIG LP + + L ++I Q ++LA + + G+ W + Sbjct: 242 VTGLGIGTLPTDIATPLIEAGKL--KEIEGAEQQHLEIILAWKRNQMGEAKSWCIQYLKK 299 Query: 295 N 295 N Sbjct: 300 N 300 >UniRef50_A6CVI9 Transcriptional regulator, LysR-family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVI9_9VIBR Length = 301 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 12/179 (6%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF AA GSFS AA ++ T SAIS TI +E ++ LF R+TR+ LT +G Sbjct: 19 LQAFVLAAETGSFSAAARKMKKTHSAISMTISNLELDVNQALFDRATRNPTLTAAGEVLL 78 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 ++A +L +R + + E + ++ + P +L +L +FP ++ + Sbjct: 79 KEAKLVLAQCENFERLANELDPEEETEFTLALDSVYSVPMEK-EILTLLADKFPKLKLKL 137 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAI-----RWAFAIAPDHPLA 183 + +GV +++ +ANI TLL+ ++ +G+I + +P+HPLA Sbjct: 138 VEKPSSGVIASVVKGEANIGF----TLLEQP--IFSNLGSIALPSAELLYVASPEHPLA 190 >UniRef50_C4ZFB9 Transcriptional regulator GltC n=13 Tax=Firmicutes RepID=C4ZFB9_EUBR3 Length = 334 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F T A+ SF+KAAE+L +T +S + E L V LF RS + I LTE G R+A Sbjct: 51 FLTVAKEQSFTKAAEQLHITQPTLSRQMAAFEEELGVTLFIRSGKKISLTEEGILLKRRA 110 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 ++LN + +E + I + + A++ + K+++P QI + T Sbjct: 111 LEILNLEEKTLEELKGKEDVVEGNITIGCGEFAAV-ETLAKICKTYKEKYPLVQIVLHTA 169 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEI-GAIRWAFAIAPDHPLA 183 + V++ + +IA+ +D G+DY I W + PD PLA Sbjct: 170 TADAVYEMMNKGLVDIALFMEP--VDTEGLDYIRITDCDHWCVGMRPDDPLA 219 >UniRef50_Q7MDM8 Transcriptional regulator n=47 Tax=Vibrionales RepID=Q7MDM8_VIBVY Length = 292 Score = 72.4 bits (176), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 3/172 (1%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF + A GS S+AA L + +S +IK +E LD+ LF RS + L+E+G+ F+ Sbjct: 8 AFCSIAELGSVSEAARHLDCNRTKLSMSIKSLEKELDIDLFVRSGNQLTLSEAGKAIFKD 67 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHT-ARLLQVLKKQFPTCQITVT 130 +LL IK+ +S A + I + L P L KQ+P+ + Sbjct: 68 CENLLVTAQRIKQTCADVSGVFNAEMWIARDDSL--PDEIWQEFSHQLSKQYPSTAFNIV 125 Query: 131 TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 + + + Q + A G +D I Y+ +G IR DHPL Sbjct: 126 LASSGDLANLVETGQVDFAFGVDYERVDSPKITYSPLGKIRMMSVCRIDHPL 177 >UniRef50_C3K9K8 Cyn operon positive regulator n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K9K8_PSEFS Length = 299 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%) Query: 17 ARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLL 76 AR GSF+KAA+ L + A+S + R+E L V LF R+TR I +T G+ F +A L Sbjct: 13 ARQGSFTKAAQALHVAQPALSMAVSRLEEELGVALFNRATRQISVTAEGQLFLARAEACL 72 Query: 77 NDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNG 136 +R + ++Q +R+ + +Y +H LL + ++P + V G Sbjct: 73 EGLAGARRELQDLTQLHSGEIRVGVPP-MYGIRHIPELLMQFRARYP----GIAMHVVEG 127 Query: 137 VWDAIINNQANIAIGAPDTLLDGGGID----YTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 D I N A I LL+ +D +G+ + HPLA I S Sbjct: 128 SADDISNRLATRDIDV--ALLESRRVDPDWESVLLGSDEMVLCMHAQHPLA-AASSIPAS 184 Query: 193 QLRLYPNIMVEDT 205 +L+ P ++ ++T Sbjct: 185 RLQDEPMLVFDNT 197 >UniRef50_A8DVY1 Predicted protein n=1 Tax=Nematostella vectensis RepID=A8DVY1_NEMVE Length = 305 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 15/153 (9%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A GSFSK A L + S++S TI ++E L V LF RSTR + LTE G+ F R A Sbjct: 8 FVHVADTGSFSKTAARLQIAPSSVSRTIDQLEKQLQVTLFKRSTRQVVLTEKGQLFLRGA 67 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICI----NQLLYTPKHTARLLQVLKKQFPTCQIT 128 LL + A+ + + + +RI + +L+ +P L+ +++P +T Sbjct: 68 LPLLEEANALVASVQDRERVVSGELRISVFESFGRLVVSP-----LIATFLRKYP--DVT 120 Query: 129 VTTEVYNGVWDAIINN-QANIAIGAPDTLLDGG 160 VT E+ NG+ D +N I IG P +D G Sbjct: 121 VTLELDNGLTDLTGDNVDLAIRIGLP---MDSG 150 >UniRef50_A1S9J5 Transcriptional regulator, LysR family n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9J5_SHEAM Length = 296 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 20/262 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S+F L A A S +AAE L T A+++ +K++E+ L + LF R + Sbjct: 1 MPSVF---QLQALCAAVEKPSLRQAAEALCKTQPALTHALKQLESQLGLPLFNRDGYRLV 57 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLL-YTPKHTARLLQVLK 119 LT SG ++ A L +++ +++G E RV + + TP +A L+ ++ Sbjct: 58 LTGSGERIYQLALKTLESHAELEQLAQHLARGDEDRVVLTVEASFDLTPILSA--LESVQ 115 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIG------APDTLLDGGGIDYTEIGAIRWA 173 +F +I + E G + + AN+AI +P T LD + ++ Sbjct: 116 AEFSQTEIVIQQEYLTGAVERVQQGHANLAITPLAPALSPGTRLDTQPLSQGQM------ 169 Query: 174 FAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAH-TINKKVGWLLHGQESILVPDFNTKC 232 +A LA P + +LR I+V+D+ T+ K+G + Q V F TK Sbjct: 170 LNVAAPRLLARYPSLCSILELRKEYQILVQDSGSGTLGLKLG-VQSAQRHWYVNSFATKL 228 Query: 233 QCQILGEGIGFLPDYMVREAMT 254 G G G LP++M+ EA+ Sbjct: 229 SLIEQGMGWGRLPEWMLTEALA 250 >UniRef50_C1DBU0 Probable transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBU0_LARHH Length = 294 Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 1/145 (0%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + L AF+TAA GSFS AA L + S +S I +E L V LF R R+ LT +G Sbjct: 4 TLDALTAFSTAAELGSFSAAARYLHKSQSTVSEAIANLEIDLGVSLFDRGARNPVLTAAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R A +L + R+ +S G+E ++ I ++ L++ LLQ L+ +FP Sbjct: 64 EQLLRHARQVLAAHEQLTRQASLMSAGLEPQLSIVLSDTLHS-LELETLLQGLETRFPEL 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAI 150 ++ V D + + +A++ + Sbjct: 123 ELETLVAEKEDVVDLVASGRAHLGL 147 >UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVS7_METML Length = 294 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/234 (24%), Positives = 112/234 (47%), Gaps = 6/234 (2%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GS+++AAE+L + SA++Y ++++E+ L + F R LT +G+ +R+A L+N+ Sbjct: 19 GSYAQAAEKLYKSQSAVTYAVQKIESLLALKAFEIQGRKAVLTPTGQMLYRRALALVNEA 78 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 ++ + +S G EA + I ++L+ + L ++ P ++ + V G D Sbjct: 79 NDLEAAANRLSAGWEAVIHIA-AEILFPTRLLLNCLNQFGQESPHTRVELIESVLGGTSD 137 Query: 140 AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPN 199 A+ +A++AI +P+ G EI I+ DHPL + + L+ + + Sbjct: 138 ALYKGEADLAI-SPNI---PSGFLGDEIMTIQLIAVAQCDHPLHQLNRVLTYRDLQSHRH 193 Query: 200 IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAM 253 I+V D+ +K + Q V + T + +G G +LP + E + Sbjct: 194 IVVRDSGAKRDKSTATIEVNQRWT-VSNIATSIEALTMGFGFAWLPASHINEQL 246 >UniRef50_Q15RK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RK7_PSEA6 Length = 297 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 14/262 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E L A S AA +L T A+S+++K++ET L + LFTR + + LT Sbjct: 1 MITIEQLKVLKAIAEEKSLRAAASKLNKTQPALSHSLKQLETQLGLELFTRDSYRLSLTN 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ + A L + I++ + ++ G EA+V I I + + + + + +K QFP Sbjct: 61 AGKTALQMALKALREVSLIEQYANHLNLGNEAKVIIAI-EAAFPIEPLFPVFEQIKNQFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAI-GAP-DTLLDGGGIDYTEIGAIRWAFAIAPD-- 179 + Q+++T E G + +A +A+ GAP D L + +I P Sbjct: 120 STQLSLTQEYVTGALQLVAEGKAQLAVTGAPIDYLAKSSELFSKQIAEGELINVATPQML 179 Query: 180 ---HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 PL + + E+Q I+V+DT GQ+ V F K + Sbjct: 180 ERYQPLDSIEALVNENQ------IIVKDTGKITQDNYFNTQTGQKRWYVNSFEAKHKLIS 233 Query: 237 LGEGIGFLPDYMVREAMTQSLL 258 G G LP++ + + L Sbjct: 234 HSLGWGMLPEHFISNQLASGAL 255 >UniRef50_B6WYC5 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WYC5_9DELT Length = 315 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 69/273 (25%), Positives = 113/273 (41%), Gaps = 30/273 (10%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST-RSIELT 62 I T E L A GSF+ A LG++ +A+ I+ E LD LF RS RS LT Sbjct: 10 IITTERLHYLWAVAETGSFAAAGRRLGVSGAAVQQVIRHFEQDLDAPLFRRSPGRSPVLT 69 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 + GR F+ A D++ ++ T QG E ++RI ++ + P+ A L++ L++ F Sbjct: 70 DLGRQFYFHALDIIPRLEGLENLAATRGQGQEGQLRIGLHGFVMFPEVRAALVE-LQRTF 128 Query: 123 PTCQITVTTEVYNG-----------VWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIR 171 P +I +Y+G D+ + +I + D GG G I Sbjct: 129 PLLEIF----LYDGEDSVLHCDKLRQLDSSARHTVDILLAPARLRYDHGG-QSVMAGRII 183 Query: 172 WAFAIAPDHPLAFVPEPIA------ESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV 225 W A DHPL+ + ++ Q+ P ++ D + + L+H + Sbjct: 184 WRVVAAADHPLSRIRGSLSLDDLLRHRQILPLPGVISSDAFYDSFRLSSHLVHYSQ---- 239 Query: 226 PDFNTKCQCQILGEGIGFLPDYMVREAMTQSLL 258 F + + G G P + R + Q L Sbjct: 240 --FYQLQEMLLAGMGFAVFPAQLARPFVEQGRL 270 >UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=Proteobacteria RepID=Q475I4_RALEJ Length = 326 Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 70/305 (22%), Positives = 130/305 (42%), Gaps = 26/305 (8%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L AF AA GSFS AA LG S IS + +E + LF R+ R LT G Sbjct: 32 DQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTGRYPVLTPVGER 91 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A +L + ++ +G+E R+ + +++L Y + LL+ FP ++ Sbjct: 92 LLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDEL-YPEETLGGLLEEFSGLFPAVEL 150 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + + V ++ A++ I +L + + +G + APDHPLA + Sbjct: 151 ELLFPLMEDVSRLVLEGGADLGIMWRQEVLPPA-LGFHALGWVPMQLVCAPDHPLAG-GQ 208 Query: 188 PIAESQLRLYPNIMVE---DTAHTINKKVG---WLLHGQESILVPDFNTKCQCQILGEGI 241 I +L+ Y +MV D+ + +V W + Q ++V + G Sbjct: 209 RIDWEELKRYRQLMVATRTDSEEKMRLRVASDVWWVESQ-WVIVELVKRRL-------GW 260 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWIKKQFA----- 293 F+P ++V + + LV+ + QD + L+ + G+ +W++ + Sbjct: 261 AFVPWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRICGQVLP 320 Query: 294 -PNGI 297 P+G+ Sbjct: 321 RPSGV 325 >UniRef50_B9JLE1 Transcriptional regulator protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JLE1_AGRRK Length = 320 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 14/130 (10%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN +FT F AAR G+FSKAA+EL +T +A+S I R+E LD LF+R + Sbjct: 11 MNGLFT------FEAAARCGNFSKAADELNVTPAAVSRMIARLEEHLDTALFSRQPGGVG 64 Query: 61 LTESGRYFFRKATDLLNDFYAIK---RRIDTISQGIEARVRICINQLLYTPKHTARLLQV 117 LTESGR F + F AI+ R I+ GI+ V + ++ T R+ + Sbjct: 65 LTESGRILFDA---IARGFSAIENALREIEDRRIGIQT-VSLSVSTGFTTHWMMPRMAE- 119 Query: 118 LKKQFPTCQI 127 KKQFPT + Sbjct: 120 FKKQFPTVDL 129 >UniRef50_D1RNI7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNI7_SEROD Length = 304 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/267 (25%), Positives = 116/267 (43%), Gaps = 40/267 (14%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF A + G FS+AAE+LGL+ S + + R+E L V LF R+TRS+ LT+ G+ F+ Sbjct: 12 AFVQAVQAGGFSRAAEQLGLSRSTVGKAVARLEQRLQVRLFQRTTRSLSLTDEGQLFYDD 71 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 L A + ++ ++ E R+R+ + +L+ K L L ++P + Sbjct: 72 CLKALAALEAAESQLAARARTPEGRLRVSLP-VLFGQKWVLPPLLALTDRYPQLHL---- 126 Query: 132 EVYNGVWDAIINNQAN----------IAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +A+ +N+A+ + IG+P D I ++G + AP + Sbjct: 127 -------EALFSNRASDLAEEGIDLAVRIGSPG---DAAAITARQLGEQKQILCAAPIY- 175 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL---HGQESILVP-------DFNTK 231 LA EP A ++L + I + H+ W L G+ L P + Sbjct: 176 LARQGEPGAVAELLQHQAIAMLRDGHSQP----WELLDPQGKTQRLQPPARLRLGNMEAV 231 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLL 258 G GI LP ++ +A+T L Sbjct: 232 LSAACAGHGIAMLPRWLAHDALTAGTL 258 >UniRef50_B6EJZ0 HTH-type transcriptional regulator, LysR family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJZ0_ALISL Length = 304 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/259 (26%), Positives = 114/259 (44%), Gaps = 20/259 (7%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L+ F A+R G+ +KAA+EL +T +A+S IK++E L+ LFTR + +ELT G + Sbjct: 14 LIVFEAASRLGTLTKAADELCVTPTAVSKQIKKLEAFLNTQLFTRGKQGVELTPKGALYL 73 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRI--CINQLLYTPKHTARLLQVLKKQFPTCQI 127 + L + + +D + + I C + PK L + ++P +I Sbjct: 74 NSVIEALEILSSQRIPMDDEHNPLPLNIEIGTCFSHFWLLPK-----LDDFRNKYP--EI 126 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 T+ + N D I + A+ + + +D + + A + +PD L PE Sbjct: 127 TLNLVINN---DRNIGDNADYDMAFFYSSMDSINKNNHLLFAEKVLLVCSPDF-LKKRPE 182 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWL-LHG------QESILVPDFNTKCQCQILGEG 240 SQL P IM+++T W ++G Q I V D + Q + G Sbjct: 183 CTDLSQLWQQPVIMLKETLSFWEDWQSWADVYGIEYQPPQNVIQVEDQVSVIQAAVNDAG 242 Query: 241 IGFLPDYMVREAMTQSLLV 259 I D+ VRE + Q LV Sbjct: 243 IALAWDWHVRELIEQGRLV 261 >UniRef50_B2I2G0 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2I2G0_ACIBC Length = 300 Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 12/258 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L+AF T GSF AAE L T S +S ++ R+E LDV L R+TR ++LT+ G Sbjct: 4 TIEELVAFITIVDTGSFVAAAEHLKQTPSGVSRSLTRLEAKLDVTLLERTTRKLKLTQEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + F KA +LN+ A + + QG +R+ + + A L+ ++ +P Sbjct: 64 QQFLIKARKILNELNAAEEELQKSDQGTAGLIRVD-SATPFVLHVIAPLMHKFRECYPDI 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + + + V D ++ ++ ++A + L+ + + R +PD+ LA Sbjct: 123 EIELNSN--DQVID-LLQHKTDVAFRFGE--LNDSSLHAKLVCKSRLYIVASPDY-LALK 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINK---KVG-WLLHGQESILVPDFNTKCQCQILGEGI 241 P +L + I + IN KVG Q I T Q I G GI Sbjct: 177 GTPTQPEELEQHDLIGFTRPTY-INSWPIKVGDEYFFAQSKIKASSGETVRQLTIRGHGI 235 Query: 242 GFLPDYMVREAMTQSLLV 259 L ++ + + M + L+ Sbjct: 236 ARLSEFEIWKDMEEGRLI 253 >UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTX4_9GAMM Length = 302 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 10/257 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E F G F++AAE L + S +SY + ++++ L + + T S R LTE+ Sbjct: 10 ITLEQWRCFVAVIDCGGFAQAAEALNKSQSTVSYAVNKLKSVLGLEVLTMSGRRAVLTEA 69 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +R A LL + A++ + + E + + I++ + L+ + Q Sbjct: 70 GQVMYRGARQLLEESVALEGLVKPLQSEWETSLTLVIDE-AFPLDVVLSALKAFEPQSRG 128 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIG--APDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 ++ + +G +A+ A++ + P G +I + + HPL Sbjct: 129 TRVHYHEAILSGSEEALDAGTADLVVAYRVPP------GYSGDQIYSAEFVAVTGASHPL 182 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A +P+ L+ + +I++ D+ GW L Q+ V T + + G G Sbjct: 183 AGSEKPLQSRALQKHTHIVIRDSGRYKQTDTGW-LRSQQRWTVSSIQTAVKTVLSGVGFA 241 Query: 243 FLPDYMVREAMTQSLLV 259 +LP + V E + + LV Sbjct: 242 WLPLHAVSEYLNKGELV 258 >UniRef50_C0A4Z9 Transcriptional regulator, LysR family n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A4Z9_9BACT Length = 317 Score = 71.2 bits (173), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 15/189 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + L + AR + S+ A EL +T SA+S+ +K ME L VLF R++RS++ Sbjct: 1 MQPVIESHQLRLYVMLARLLNMSRVANELRMTPSAVSHALKAMEADLGCVLFERTSRSMK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICIN----QLLYTPKHTARLLQ 116 LT +G +A +L +++ R I+ + RVRI + Q + P +L+ Sbjct: 61 LTPAGEALLPEAQAILAGMESLRARAGAIADPGQRRVRIGASTTACQFILPP-----VLR 115 Query: 117 VLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG--GIDYTEIGAIRWAF 174 ++ FP I + D+I ++ + A+ TL G G+++ + A F Sbjct: 116 EFRESFPDHTIRIEPCTARQAADSIAADRIDFAV----TLETPGRAGLEFRFLAADTLQF 171 Query: 175 AIAPDHPLA 183 + P HP A Sbjct: 172 IVHPLHPWA 180 >UniRef50_C1XNG0 Transcriptional regulator, COG0583 n=2 Tax=Meiothermus RepID=C1XNG0_MEIRU Length = 312 Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 62/251 (24%), Positives = 110/251 (43%), Gaps = 17/251 (6%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L+ F A GS SKA L +T S ++ IK++E L LFTR R + LT +G Sbjct: 6 KQLVYFIAVAESGSISKALTSLNVTQSVVTEAIKKLEETLGAELFTRHARGMILTHAGHQ 65 Query: 68 FFRKATDLL----NDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 F R A ++L N AI+ R D + ++ + + L+ T + LL ++ FP Sbjct: 66 FLRHAHEVLAALRNAEQAIRERPDATT----GQLNLGVTSLV-TAYYLPYLLDRFERVFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL- 182 Q+ V + + +IN + ++A+ +++D ++ + W + +HPL Sbjct: 121 GVQVAVVEDRRGYIEHLLINGELDVAV-MNVSMVDKQALETRTLLRAPWRVWLPTNHPLV 179 Query: 183 ---AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 A E + E + N +E+ I + G+ + ++ LG Sbjct: 180 QQEAVSLENLREERFLYLKNDELEEVTQQIYRLSGF---PRVAVRTDSIEAMRSLVALGI 236 Query: 240 GIGFLPDYMVR 250 G+ LP+ M R Sbjct: 237 GVAVLPNLMYR 247 >UniRef50_A6GB77 Putative Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GB77_9DELT Length = 302 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 111/258 (43%), Gaps = 44/258 (17%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 +L F AR G+F+ AA LGLT +A+S+ +KR+E L V L R+TRS LT++G+ F Sbjct: 1 MLVFAEVARLGNFAAAARHLGLTRAAVSHQVKRLEDELGVRLLNRTTRSQSLTDAGQVFL 60 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI-- 127 + + + RR+D I A +R+ + L + L + +P +I Sbjct: 61 ASCEAIATELDVVNRRMDNIRTEPAATIRLTCSVNLGL-QAVVPALSAFHELYPKVEIDL 119 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE-----IGAIRWAFAIAPDHPL 182 T+T ++ + V + I D + GG + +E +G R+ +P++ Sbjct: 120 TMTDDIVDIVAEGI------------DIAIRGGKLADSELMARSLGRSRYRICASPEY-- 165 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAH-----TINKKVGWL-LHGQESILVP-------DFN 229 Q R P + E H T+ K+ L GQ L P + Sbjct: 166 ---------LQARGRPQKVEELGGHAWVVYTLGKRTLTLSARGQTHTLTPAGPLRTNNAA 216 Query: 230 TKCQCQILGEGIGFLPDY 247 ++ + G G+ LP+Y Sbjct: 217 SRLYFTLRGHGLARLPEY 234 >UniRef50_A3X3Y5 Transcriptional regulator, LysR family protein n=3 Tax=Rhodobacteraceae RepID=A3X3Y5_9RHOB Length = 295 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 67/276 (24%), Positives = 121/276 (43%), Gaps = 57/276 (20%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF GSF++AAE+L ++ + +S IK +E L VL TR+TRS+ LT++G+ F+ + Sbjct: 9 AFRRIVERGSFARAAEDLRVSPALLSREIKLLEESLGTVLLTRTTRSMSLTDAGQLFYDE 68 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRI----CINQLLYTPKHTARLLQVLKKQFPTCQI 127 A+ +L+ + ++ RI + I +++ Q + P +L L +P ++ Sbjct: 69 ASGILDAVFQVETRIRDGAGEIRGHLKVNASSSFGQTVIAP-----ILPGLFDAYPDLRL 123 Query: 128 TVT-----TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 T++ ++ G +D I +A + PD+ L ++G R AP + L Sbjct: 124 TLSLDDRVIDMVEGGFDVSIRIRAAM----PDSALVA-----RKLGRTRQQVFAAPSY-L 173 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKV----------GWLLHGQESILVPDFNTKC 232 V P + +N +V W LH + D + Sbjct: 174 ESVGAP--------------QKPQDVVNHRVIGFLLADHLSAWTLHSPSETVTVDLDPPI 219 Query: 233 QCQ---------ILGEGIGFLPDYMVREAMTQSLLV 259 + I G+GIG LPD++ ++A+ + LV Sbjct: 220 RVGNSLVLRDLLIAGQGIGTLPDFVSKDAVARGELV 255 >UniRef50_B9XKJ1 Transcriptional regulator, LysR family n=1 Tax=bacterium Ellin514 RepID=B9XKJ1_9BACT Length = 309 Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 7/151 (4%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F AR SF+KA +E GLT SAI+ I+ ME L + LF R+TR ++LT +G F K+ Sbjct: 22 FHLVARRSSFTKAGQEAGLTQSAITRQIRGMEDRLGITLFERTTRHVKLTRAGARLFEKS 81 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQ---LLYTPKHTARLLQVLKKQFPTCQITV 129 LL + R + + + +R+ I++ Y P +++FP QI + Sbjct: 82 DALLAEVNGTIRELQRDFELVPQTIRVGISRSIGFAYLPG----FFFAFRRKFPGVQIQL 137 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGG 160 E + + N+ ++A+ +P L G Sbjct: 138 AQEPSRTLLQNVEQNELDVALLSPPPHLPRG 168 >UniRef50_Q2CC44 Transcriptional regulator n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CC44_9RHOB Length = 294 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 10/282 (3%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F + R FS A ELGL+ IS I +E L V L R LTE GR Sbjct: 14 FDSVVRNSGFSAAQAELGLSQPTISNHITALEERLGVRLCQRGRGGFVLTEEGRIVHELG 73 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARL---LQVLKKQFPTCQITV 129 LL + + ++ + G+ RVR+ + L T H RL ++ + P Q+ + Sbjct: 74 QSLLGELESHGSKLAALRGGLVGRVRLAVVDCLATDPHF-RLPDAVRGFRALAPAVQVEL 132 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 T E + I +N +I IG D LL G+++ + R + HPL F + Sbjct: 133 TVERPQDILSGIHDNSFDIGIGGFDRLLS--GLEHKVLYHERHSLYCGRAHPL-FEAGEV 189 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 AE++L +P + + ++ + V + + + G +G LPD+ Sbjct: 190 AEAELGAHPWVHRRYWSKRRQRRRSL---SESDAFVQEIEAQIIMVLSGTYLGLLPDHAA 246 Query: 250 REAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQ 291 + + L P D + + T+ + + ++ + Sbjct: 247 AAHVARGELRALPFQGPDGDVTIDVVTRSGPQPEAVELLRAE 288 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 71/265 (26%), Positives = 111/265 (41%), Gaps = 31/265 (11%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 EN+ AF + GS +KAAE L LT ++S I+ +E LD+ LF R + LTE G Sbjct: 4 ENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEKGEQ 63 Query: 68 FFRKATDLLNDF----YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 F+ A +L+ + +++K+ + I I N L +L LK+++ Sbjct: 64 FYPHAKKILHSYQEAKHSLKQTMIPYELTIGCASSISNNLL-------PNILPALKEKYE 116 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + T V +INNQ + I +T I+ I + + HPLA Sbjct: 117 NLKVKIVTGHSKDVVQKVINNQVDFGIVRTET---HPQIESIPIFSDPIGLFVPTYHPLA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL-LH---------GQESILVPDFNTKCQ 233 + + I +L P I + + WL LH SI V T Sbjct: 174 SL-DNINMKELEEQPFIFFDYGS------FDWLMLHRLFQKNNITPNISIEVDHMETAKN 226 Query: 234 CQILGEGIGFLPDYMVREAMTQSLL 258 + G G+ FLP + VR + Q L Sbjct: 227 LVLQGMGLSFLPHHCVRNEVEQGTL 251 >UniRef50_B5FDF2 Transcriptional regulator, LysR family n=20 Tax=Gammaproteobacteria RepID=B5FDF2_VIBFM Length = 295 Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 17/245 (6%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GS AA L + + + Y+IK++E L + L R LT G+ R+A ++ Sbjct: 20 GSIQAAANTLNKSHTTLIYSIKKLEDQLGLSLLKVEGRRAVLTNDGKSLLRRAQSMIEQA 79 Query: 80 YAIKRRIDTISQGIEARVRICINQL-----LYTPKHTARLLQVLKKQFPTCQITVTTEVY 134 A++ +SQG+EA + I I+ L LY+ T K+ + + V Sbjct: 80 RALEEISTQLSQGVEAEITIAIDHLCDRSWLYSAMTT------FMKENTSTSVQVVETSL 133 Query: 135 NGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQL 194 + + + + A+I+I L G R ++ DHPLA +P P + + L Sbjct: 134 SKTSNMVTSESADISI----ITLPITNHPCEAFGITRMLPVVSIDHPLANLPAP-SLADL 188 Query: 195 RLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMT 254 I++ D + + VGWL Q I V +F+ Q G G LP +++ + Sbjct: 189 TTNCQIVIRDLGASNKQDVGWLKSNQR-ITVDNFDHAWQATKQGLGYCRLPQHVIEQHND 247 Query: 255 QSLLV 259 + ++V Sbjct: 248 KEMVV 252 >UniRef50_B6FJI6 Putative uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJI6_9CLOT Length = 294 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 37/278 (13%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 F A SFS+A+++L ++ SA+S +IK +E LD LF RST+ ++LT G R Sbjct: 10 VFFYVATTLSFSEASKQLFISQSAVSQSIKALEKKLDQTLFIRSTKRVQLTPEGEILLRH 69 Query: 72 ATDLLNDFYAIKR----RIDTISQGIEARV----RICINQLLYTPKHTARLLQVLKKQFP 123 +N IKR ID+ S G + R+ IC + P L+ K+FP Sbjct: 70 VEPAMN---LIKRGESQLIDSSSTGGQIRIGASDTIC--RYFLVP-----YLERFHKEFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQAN-IAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 I VT + + + Q + I I P++ L + +I + F IA Sbjct: 120 NAHIKVTNQTSIKCVELLETGQVDLIVINYPNSYL-SNLYSFKQIAEFKDVF-IANRSFA 177 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI-----L 237 + ++ L YP +M+ D T ++ + L + LVP+ + + Sbjct: 178 ELKDKALSLRDLLNYPILML-DRKSTTSEFLHSLFQKHQLDLVPEIELSSNDLLIDLAKI 236 Query: 238 GEGIGFLPDYMVRE-------AMTQSLLVTRQ---IHN 265 G GI F+PDY V + T +L TRQ +HN Sbjct: 237 GLGIAFIPDYCVPKDSDDLFVVHTDEVLPTRQLVVVHN 274 >UniRef50_Q3ICA3 Putative Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q3ICA3_PSEHT Length = 300 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 66/277 (23%), Positives = 124/277 (44%), Gaps = 9/277 (3%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 S S AA +L T A++ IK +ET + L RS ++LTE GR F R+A LLN+ Sbjct: 16 ASLSAAALKLHKTQPALTLAIKSLETKIGFALLDRSQYRLQLTEKGRIFHRQAKQLLNNN 75 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 + + ++ G EA+ RIC Q+ + + + + F + + ++T+ + Sbjct: 76 EELAQLAKELALGNEAQFRICYEQICHVQSYNEIISNTFRV-FNSTEFSLTSGKRFISLE 134 Query: 140 AIINNQANIAIGAPDTLLDG-GGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYP 198 + N QA + IG L G ++ IG + A + +P ++ S+L+ YP Sbjct: 135 QVNNGQAELGIGPWFDLFHATGDLESLPIGKLDIGIVSAKN----IIPNTLSYSELQSYP 190 Query: 199 NIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLL 258 + + ++ +I+ G + + D ++ + G G + E + LL Sbjct: 191 CLAMFESGLSIDSDRLSYSKGPAMMKIDDISSLKSFLLSGAGWAMISLEHCAEEIKSGLL 250 Query: 259 VTRQIHNPRQD--SRMLLATQHSA-TGQVTQWIKKQF 292 I + + +++ + QHS+ G V + I +QF Sbjct: 251 QKVSITDREHEFSTQIRVFRQHSSHHGPVARTIWQQF 287 >UniRef50_Q0B6H7 Transcriptional regulator, LysR family n=15 Tax=Burkholderia RepID=Q0B6H7_BURCM Length = 296 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 21/255 (8%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T +++ T GSFS AA LG T SA+S I +E LD+VLF R TR T Sbjct: 1 MLTSDHIDMLLTVIDKGSFSAAARALGRTPSAVSMAIANLEAELDLVLFDRGTREPTPTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICI-NQLLYTPKHTARLLQVLKKQF 122 + A + A++ +S+G+E +R+ + +L P AR L + ++ Sbjct: 61 AMAALLPDARSIAERLQALRAHAQHLSEGVEDTLRLGLAAELDGAP--VARALSAVAAKY 118 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDY---TEIGAIRWAFAI--- 176 P I++ T + + DA+ GA D + GG+D +I A+ W + Sbjct: 119 PALAISIVTAPQDAIVDALHR-------GAVDLCVAYGGLDLHPQEQIHAL-WTETLIAV 170 Query: 177 -APDHP-LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQC 234 AP HP +A P A +L + I++ D + + G + V D T Sbjct: 171 AAPGHPAIAEAAHPEAIERLSGFRQIVIADPERPLTDVRPVI--GNRTWKVTDMATAIAL 228 Query: 235 QILGEGIGFLPDYMV 249 G G LP+ + Sbjct: 229 VKAGHGWANLPESTI 243 >UniRef50_A6B821 Transcription regulator, LysR family n=2 Tax=Vibrio parahaemolyticus RepID=A6B821_VIBPA Length = 294 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 68/256 (26%), Positives = 115/256 (44%), Gaps = 19/256 (7%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +FT E L AF GSFS AA +LG S IS I ME V LF RS R +LTE Sbjct: 1 MFTIEQLQAFVATFESGSFSAAARKLGRAQSVISQHIMNMELDCGVDLFDRSGRYPKLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G A ++ + + + + + + I++ + + +L+ L++QFP Sbjct: 61 NGHALMPYAQAAISQLDRLNNKATQLFSAQASELVLAIDEGIPLTR-LPDVLKNLEQQFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ T + + + + +A I D + ID+T +G I + ++ DHPLA Sbjct: 120 QLQVECLTASSPDIIELVKSERATTGIILSDLQM-PRHIDFTNLGNIAFDVYVSSDHPLA 178 Query: 184 FVPEPIAE-SQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDF----NTKCQCQILG 238 + I QL+ Y +++ + + G L L PD N ++ Sbjct: 179 --AQRITHIDQLKQYRQLVIRSKS----AEPGSL----NQALSPDIWYADNYYILLELAN 228 Query: 239 EGIG--FLPDYMVREA 252 +G G FLP+++V ++ Sbjct: 229 KGFGWCFLPEHLVADS 244 >UniRef50_B0T6G9 Transcriptional regulator, LysR family n=2 Tax=Caulobacter sp. K31 RepID=B0T6G9_CAUSK Length = 317 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 84/175 (48%), Gaps = 7/175 (4%) Query: 17 ARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLL 76 AR GSF+ A +G+T SA++ ++ +E + +F R+TR + LTE G YF +A LL Sbjct: 13 ARAGSFTAGAAAVGITQSAVTKSVADLEREVGYAIFERTTRGVVLTERGSYFAERAAMLL 72 Query: 77 N---DFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEV 133 D + R + G+ RV + L +T + L+KQ P + +T Sbjct: 73 EATRDLFDPDARRPNLYSGV-LRVGVAPASLEWT---VVEAIVRLRKQHPAIKFELTGSG 128 Query: 134 YNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 + + + + ++AIG L D ++ + GA+ + + DHPLA V P Sbjct: 129 FERMIQQLRSGAIDVAIGLDAALSDWPDVNRSIFGALHTSPFVRKDHPLAAVANP 183 >UniRef50_B9YAT6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAT6_9FIRM Length = 306 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 13/177 (7%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F T A+ S+ +AAE L T +SY IK +ET L V LF R+ RS+ELT +G YF+++ Sbjct: 17 FLTVAQTLSYIRAAELLYTTQPVVSYQIKALETELGVTLFNRTHRSVELTTAGSYFYQQV 76 Query: 73 TDLLNDFYAIKRRIDTISQGIEA---RVRICINQLLYTPKHTARLLQVLKKQFPTC---Q 126 L+ R+++TI Q +++ + IN L+ A+L Q++K +C Sbjct: 77 EPLM-------RQLETIVQTMQSMNDQTPKLINLLVRRLADYAKLTQIIKNYSESCPLVH 129 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + T+ G ++ + IA + + + + + ++ ++ HPLA Sbjct: 130 VNILTQEDRGSRQLLVTGEVEIAFCYQFEVENDPKLKFLPLMESQYYVLVSKTHPLA 186 >UniRef50_A1TIL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=A1TIL9_ACIAC Length = 323 Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 6/208 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ +++ F GSFS AA L SA+S TI +E LDV LF R R + T + Sbjct: 3 FSSDSVNVFLAVLDHGSFSAAARALSRVPSAVSMTIAHLEAELDVRLFDRGGREPQPTAA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 R +A L + + ++QG+E R+ I I L T T L L ++P Sbjct: 63 ARALEPQARLLAAQLRQLNAQALALTQGLEERLTIAIAPELLTGPWT-EALAALTAEYPQ 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL-- 182 Q V + +A +A+ + LDG + E+G+ IAP HP+ Sbjct: 122 LQAEVLAAPQADAMALLHAGRAQLALVFERSSLDGRE-GFQEVGSETLVAVIAPQHPVMQ 180 Query: 183 AFVPEPIAESQLRLYPNIMV--EDTAHT 208 A P++E+ L I+V D A T Sbjct: 181 AAAGAPLSEAHLTTTRQIVVAGRDLAQT 208 >UniRef50_A9IDV2 Transcriptional regulator, LysR-family n=3 Tax=Proteobacteria RepID=A9IDV2_BORPD Length = 299 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 10/196 (5%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L F A SF++AA + + S +S I+ +E L V L R+ I LT G F Sbjct: 5 HLHYFLIVAEEQSFARAAARVHIEPSPLSRAIQELENQLGVRLLHRAKGRIRLTWPGEVF 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 +A +L+ K R+ SQG R+RI + L P+ T +LL +++ P ++ Sbjct: 65 REEARRMLSFMDNAKSRVHAASQGYRGRLRIGLADSLAQPRLT-QLLARCREEEPRTEVR 123 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE--IGAIRWAFAIAPDHP-LAFV 185 ++ N + A+ ++Q ++ DG Y + + A R A AI HP LAF Sbjct: 124 ISEMTVNEMLQALRHDQIDVGFTVDGEATDG----YVKEMVWAERPAIAIPTHHPLLAFD 179 Query: 186 PEPIAESQLRLYPNIM 201 P+AE+ LR YP I+ Sbjct: 180 KIPLAEA-LR-YPLIL 193 >UniRef50_Q4K6W0 Transcriptional regulator, LysR family n=14 Tax=Pseudomonas RepID=Q4K6W0_PSEF5 Length = 298 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 75/177 (42%), Gaps = 6/177 (3%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A GSFS AAE L + SA+S IK +E L LF R+ R LT +G FF KA Sbjct: 10 FVEIAECGSFSAAAERLFVAQSALSRQIKELENQLQTPLFERTARLPRLTAAGEAFFPKA 69 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK---KQFPTCQITV 129 +LL++ + + G +R+ + T + RLLQ + + P + + Sbjct: 70 RNLLSELHKASELATQVGMGQLGTLRLSHSS---TVPMSGRLLQGIGSYLQHCPGASMDI 126 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + + +I + L G+ T + A A+ P HPLA P Sbjct: 127 AKLSSEAQLEELAQGHLDIGLLRLPVLRQRAGVQITPLFAEPLLLAVPPQHPLALAP 183 >UniRef50_B8IXI4 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IXI4_METNO Length = 310 Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 14/248 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E F A+ GSF +AAE+LG T SAIS+ I++ME L LF R LT Sbjct: 4 ITLEQWRMFVATAQQGSFLQAAEKLGKTQSAISHAIRKMEETLGQELFAIEGRRARLTTV 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + +A +L+ I+R + E + I ++ +++ + R L+ +K +P Sbjct: 64 GEMIYPRARELIGHAAQIERLCVSFDPEAEGEISIAVD-VIFPMQLLHRALEEYEKLYPH 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 + V +G + + + +A I I P T+++ + + + DHP Sbjct: 123 FSVRVWETTLSGASEILEDGRAVIGIAGQLPPGTVME-------PLLKVSFLCVAVADHP 175 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 L + + + L+ + I++ D+ N GW L ++ V T G+G Sbjct: 176 LHREGD-LTHAMLKEHRQIVLSDSGRR-NLSSGW-LGARKRWTVGHLATSVALVRAGQGY 232 Query: 242 GFLPDYMV 249 +LP++ + Sbjct: 233 AWLPEHSI 240 >UniRef50_Q0B1K1 Transcriptional regulator, LysR family n=2 Tax=Burkholderia ambifaria RepID=Q0B1K1_BURCM Length = 301 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 66/272 (24%), Positives = 119/272 (43%), Gaps = 21/272 (7%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L A T A GSF A+ L ++ A++ T++R+E + + +F R+TR +E+T + Sbjct: 9 LSSRELQAVCTIAECGSFMAASITLNVSQPALTRTVQRVEQAIGLDIFRRTTRRLEITAA 68 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPK-HTARLLQVLKKQFP 123 G F A +L D + I+ E R ++ ++ ++ H ++ K P Sbjct: 69 GEEFVALANRILADLRISVDSMREITD--ELRGQVIVSTVMSVACIHLPGIIARYSKSKP 126 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAF----AIAPD 179 +I + VY + + + A+ I D + + E+ I+ A + P+ Sbjct: 127 RVEIQIREGVYGKIVEDVRGGVADFGITYIDDVPN-------ELSTIKLAIEAFHVVMPN 179 Query: 180 -HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG----QESILVPDFNTKCQC 234 HPL+ P I+ + +P + + + T G L G Q ++ V F T QC Sbjct: 180 GHPLSKKPG-ISLEEASHFPMVSMPKESQTRRHLEGLALAGGLVLQHAVTVSQFATVMQC 238 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNP 266 G G+ LP V A++ LV+R + P Sbjct: 239 VQAGVGLAILPGGAVPSALSAG-LVSRPLTKP 269 >UniRef50_Q0F3Q1 Putative transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F3Q1_9PROT Length = 302 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 60/197 (30%), Positives = 95/197 (48%), Gaps = 11/197 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + LL+F A+ GS S AA LT AIS +KR++ + V L+ R R + LT +G Sbjct: 6 DQLLSFVALAQTGSVSMAAAARHLTQPAISNQLKRLQDSVGVPLYRRQGRGVVLTSTGEI 65 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEA-RVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F+R A + + + D + QG+ A RVR+ +Q + A L+ + + +P + Sbjct: 66 FYRHALQVQHSLQQTELFADGL-QGLTAGRVRLAASQTIAGSFLPAALV-LFNQLYPEIE 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEI---GAIRWAFAIAPDHPLA 183 I V + V+D + + +G ++LL D + G R + PDHPLA Sbjct: 124 IFVDSANSQQVFDRMDTHD----LGLVESLLPTAVPDCCSVELLGHDRIVAVMRPDHPLA 179 Query: 184 FVPEPIAESQLRLYPNI 200 P I S+L +YP I Sbjct: 180 AQPA-IELSELAMYPLI 195 >UniRef50_A6X5N5 Transcriptional regulator, LysR family n=37 Tax=Brucellaceae RepID=A6X5N5_OCHA4 Length = 301 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/248 (25%), Positives = 112/248 (45%), Gaps = 10/248 (4%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F + GSFS+AAE +G+T S +S I+ +ET L V L RS R ++L +G F +A Sbjct: 12 FMALVKAGSFSRAAEVVGITQSTLSAAIQALETELGVTLIDRSGRRMQLLPAGEDFLARA 71 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 ++ + + + R+R+ + + P ++L K FP Q+T+ Sbjct: 72 RTIIALIEELPEHARQAERPLTTRLRMGVIPSI-APFLLPKVLPATAKAFPELQLTIREG 130 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 + + D++ + ++A+ A LD + E+G + A+ DH LA + I Sbjct: 131 LTRSLLDSLRSGSLDVALVAHPYDLD--EFEIAELGRDIFYLAVRRDHALANRDQ-IDAD 187 Query: 193 QLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFN-----TKCQCQILGEGIGFLPDY 247 L+ P +++E T H + + V + + D + T Q G G+ LP+ Sbjct: 188 DLQGQPFLLLE-TGHCLREHVMAAIGSTPAQASGDVHATSIMTLVQLVDFGMGVTLLPEV 246 Query: 248 MVREAMTQ 255 V+ T+ Sbjct: 247 AVKAGATR 254 >UniRef50_Q46S80 Transcriptional regulator, LysR family n=4 Tax=Cupriavidus RepID=Q46S80_RALEJ Length = 310 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 50/177 (28%), Positives = 86/177 (48%), Gaps = 7/177 (3%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L AF AR SF++AA ELGLT SA+S +++ +E +D LF R+TR +ELT++G++ Sbjct: 7 QLKAFAAVARHKSFTRAAAELGLTQSAVSRSVRELEEEIDQRLFDRTTRQVELTDAGQHL 66 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 ++ L+ + R ++ + V+I + +L + A L +K +P I Sbjct: 67 SQRICHLIEEVEQTLRESQGAARPSQGMVQIATDPVLSSMSVPA-WLAGCRKAWPAIAIH 125 Query: 129 VTTEVYNGVWDAIINNQANIAIGA-PDTLLDGGGIDYTEIGAIRWAFAIAP-DHPLA 183 + V ++ + + + I P + D Y E + A+ P HPLA Sbjct: 126 LKDRSQESVLQSVRSGEVDFGIATDPQSSDDL----YCEPLCVDPYHAVLPAQHPLA 178 >UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQJ6_9BACT Length = 291 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 115/260 (44%), Gaps = 12/260 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E + T GSF AA++L T AIS +I ++ET L + LF R R LT Sbjct: 1 MTLEQIHILKTIVDEGSFQAAADKLWKTQPAISMSINKLETELGLQLFDRGHRKTTLTAH 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLL-QVLKKQFP 123 G+ + A +L + I +++ E + I I+ + P T +L + + +P Sbjct: 61 GQRIYEYAEQMLINAEEITSLSQYLNEAHEEEIAIAIDTI--CPLKTLLILFKNFFQSYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAI---GAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ + EV G + + ++A+I I G+P + L D + I AP+ Sbjct: 119 KTRLKINFEVLGGTLERLEQDKAHIVISNLGSPSSPL-----DRIPLWDINMTPVCAPNS 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 I+ ++L+ P I++ +T+ + LL G + V D K + + G G Sbjct: 174 LNLDDQNYISTNKLKRSPQIVIPETSEARSNSKS-LLQGGQRHYVSDLEIKKEMLMAGLG 232 Query: 241 IGFLPDYMVREAMTQSLLVT 260 G +P + ++ + L++ Sbjct: 233 WGSMPQHKIKNELASGQLIS 252 >UniRef50_A0KBS2 Transcriptional regulator, LysR family n=5 Tax=Burkholderia RepID=A0KBS2_BURCH Length = 306 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/307 (24%), Positives = 134/307 (43%), Gaps = 18/307 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F +L F AA GS S+AA++ ++ S S I +E VVL R+ +ELT Sbjct: 1 MFDLTSLALFVRAAELGSLSRAAQQSHMSLSTASRRIALLEHHFRVVLLNRTVAGVELTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G R ATDLL AI + ++G RVR+ N + + L+ +++ Sbjct: 61 AGEALLRHATDLLLRTDAIYSELSDYTKGAVGRVRVFAN-ISAISQDLPDQLRTFSQRYR 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ ++ + + A+ +A++ I T + GI R + + D+PL Sbjct: 120 DIKLQISELRSSDILQALREGRADVGIVTSRTAPE--GIHLAPYCMDRASVVVPDDYPL- 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKV-GWLLHGQE---SILVPDFNTKCQCQILGE 239 + I S L + + ++D + V L G+ + V F C+ G+ Sbjct: 177 -TGDSIDFSALLDHDLVALDDRSELTRALVREAALLGKSVRFRVQVQSFEAMCRLIAAGQ 235 Query: 240 GIGFLPDYMV---REAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK---QFA 293 GIG LP+ V RE M + ++++P + M + + A T+ + + FA Sbjct: 236 GIGILPERAVALFREPMRLRFI---RLNDPWANRVMSVGIRAGAVPLPTRKLFEFLASFA 292 Query: 294 PNGILTG 300 P +++G Sbjct: 293 PPSLVSG 299 >UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=Psychrobacter RepID=A5WE98_PSYWF Length = 321 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 3/182 (1%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L AF A GSF++A++++ LT SA+S IK +E L+VVLF R+TR + L+ G Sbjct: 4 TLRQLNAFIHVAETGSFTRASDKMHLTQSAVSGLIKELENTLNVVLFDRTTRQLSLSVVG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + +A +LN+ + +++ + VR+ ++Q + ++ K +P Sbjct: 64 HHLLPQARRVLNELTLFENEASSLTSLAQGTVRLAVSQ--FAASSMPAVIAQFAKLYPEI 121 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAP-DTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++++ V I N + ++ +G +T + + + + + + HPLA Sbjct: 122 KVSLLDCSAEDVLQHIENIEVDLGVGVELNTDQNDENLSADLLYELPFCIVLPQAHPLAC 181 Query: 185 VP 186 P Sbjct: 182 EP 183 >UniRef50_A3WIM0 LysR-family transcriptional regulator n=1 Tax=Idiomarina baltica OS145 RepID=A3WIM0_9GAMM Length = 295 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 1/123 (0%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 LLAF A SF KA++EL LT S +S+ ++ +E L L R+TRS+ LTE G+ F Sbjct: 9 LLAFQKTASRLSFKKASDELNLTPSTVSHLVRSLEERLKTRLLNRTTRSVSLTEPGQKLF 68 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + +LN+ +DT + +RI +N+ + P +L + ++ FP + + Sbjct: 69 GQLNSILNNLTQAVDELDTDDKQPNGTIRISVNE-IAAPILLDKLGKEFRETFPNVHVEL 127 Query: 130 TTE 132 + Sbjct: 128 IVD 130 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 25/195 (12%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 AF AR GSF++AA+EL + A++ +IK++E+ + + LF R+TR + T +G F Sbjct: 3 AFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFIPV 62 Query: 72 ATDLLNDF----YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLL----QVLKKQFP 123 A LL +F Y + D S + V P R+L ++FP Sbjct: 63 AERLLREFDMAIYDVTATADCRSGHVSMSV---------LPSVATRILPDVISEFTEKFP 113 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGA---PDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 I V+ GV ++ N+ + IG+ P++ L ++ + R+ DH Sbjct: 114 DISIHVSDYNAQGVQRSVERNEVDFGIGSLWHPNSKL-----EFRPLMEDRFELVCHKDH 168 Query: 181 PLAFVPEPIAESQLR 195 PLA P+ QL+ Sbjct: 169 PLAAEGAPVTWEQLK 183 >UniRef50_C9NPQ3 Transcriptional regulator LysR family n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPQ3_9VIBR Length = 282 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 6/171 (3%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 GSF+ AAE LGL+ S S + ++E L V LF R+TR + ++ G +++R+A +L F Sbjct: 11 GSFTAAAERLGLSKSLTSKYVNQVEAQLGVTLFHRTTRKLSVSPPGWHYYRQAQQVLAQF 70 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 + ++D +Q +R+ +Q + + + L+ Q+P QI + V N D Sbjct: 71 DKLYSQLDAHNQTASGPLRVTASQ-GFAEELLSPLIPAFHAQYPEIQIDLL--VTNQKLD 127 Query: 140 AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIA 190 ++ + +IA A + LD G+ Y + ++ A AP+ +V P A Sbjct: 128 -LVEHGIDIAFRA--STLDDSGLHYRPLMSLSSAAYAAPELAEQYVDRPEA 175 >UniRef50_B9XK88 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XK88_9BACT Length = 300 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 4/181 (2%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L F A SFS+AA L + A+S IK++E L +F RS + LT +G Sbjct: 5 HLRYFQAVAEELSFSRAARRLHIAQPALSRAIKQLEAILGANVFERSRHHVRLTPAGSVL 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 R+ T LL F RR+ + G E +R+ P RLL+ +K+FP I Sbjct: 65 LRETTMLLEHFEESLRRVRRTAAGEEGELRLGYIGPPTQP-FLGRLLREYRKRFPLVTIH 123 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA---FV 185 + VW+ + + + AI P + G+ + R + HP A +V Sbjct: 124 LEERTPQRVWEMVAKGRLSAAITRPVLTNEALGLRTVVLKQERLGIVVPVAHPFAKRRYV 183 Query: 186 P 186 P Sbjct: 184 P 184 >UniRef50_C3JZ35 Putative LysR-family transcriptional regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZ35_PSEFS Length = 284 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 19/289 (6%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + E L AF AA GSFS AA +LG + S +S + +E LDVVLF RS+R LT +G Sbjct: 3 SNEVLQAFVQAATQGSFSAAARKLGKSQSTVSAAVASLEIDLDVVLFDRSSRKPTLTPAG 62 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +A +L ++ ++QG+E R+ I ++ + + ++ +++P Sbjct: 63 HVLLERAEQVLEASSRLELAASQLAQGLEPRLTIAMSDTYQSQRFETAII-AFAERYPDL 121 Query: 126 QITVTTEVYNGVWDAIINNQANIA------IGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 ++ + + D + + +A IA + PD L + TEI A ++P Sbjct: 122 ELEWLIAECDDLIDLVQSGRAQIAFIEQQDVYPPD-LTRSPVQERTEI-----ALFVSPQ 175 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 H LA + + + L+ + + + + + + S L+ + LG Sbjct: 176 HALASL-DSVDHQTLKHHRELRLASIVKPYDNRAAGRVWSAASYLM-----LMEMAQLGF 229 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWI 288 G LP ++V SL + PR + L ++ A G W+ Sbjct: 230 GWAPLPRWLVERFGNASLQELKVRGWPRSVTVDALWSRQHAPGPAGSWL 278 >UniRef50_A3M2Y7 Transcriptional regulator n=8 Tax=Acinetobacter RepID=A3M2Y7_ACIBT Length = 326 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 1/131 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN++ +L F T A+ SF ++AEELG + + IS I +E L LF RSTR + Sbjct: 1 MNNLPNLSDLKVFCTVAKLKSFVESAEELGTSPAFISKRINILENTLSCKLFHRSTRHVS 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE G+ + +++L +F + ++ R+ I I+ + KH A +L L Sbjct: 61 LTEDGKLILERVSNILEEFDEVCELVNNPLSTPTGRMDI-ISSFGFGRKHIAPILSKLMM 119 Query: 121 QFPTCQITVTT 131 +P QI T Sbjct: 120 LYPKLQIHFDT 130 >UniRef50_Q1YUD1 Probable transcriptional regulator n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YUD1_9GAMM Length = 297 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 12/240 (5%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 ++ FTT AR GSF++AA +L L+ A+S +K +E L L R+TRS+ LT G+ F Sbjct: 7 QIVVFTTVARTGSFAEAAIQLYLSQPALSVAMKNLEQSLGGKLLARTTRSVTLTPEGKAF 66 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQL-LYTPKHTARLLQVLKKQFPTCQI 127 + A LL+++ + D + R ++ I + YT ++L Q+P I Sbjct: 67 YPVARRLLSEWEQSMQ--DVRNHFALGRGKLDIAAMPTYTTNFLPKILAEFHSQYPNIHI 124 Query: 128 TVTTEVYNGVWDAIINNQANIAIG-APDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 TV + V + ++ + I AP+ D + + + R+ + HPL Sbjct: 125 TVHDVIAENVVQMVREERSELGITFAPE---DAPDLHFQPLYQDRFVAILPFKHPL-LEK 180 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI---LGEGIGF 243 + + L YP++ ++ A T K + L + +L P F + I + EG+G Sbjct: 181 QTLKWIDLLAYPHLSLQRPAGT-RKLIDQALQEKGLLLTPAFESHQLVSIGRMVNEGLGL 239 >UniRef50_B5WQC5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WQC5_9BURK Length = 296 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 11/256 (4%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L F GSF+ AA L T + + +E + + L R+ + LT G F Sbjct: 8 QLQCFEALVSEGSFAAAAAHLNRTHPTVHAAVTALEAQVGMTLLDRAGYRVTLTAEGVAF 67 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 + L+ + ++R + ++ G EA +R+ + L + L Q + T ++ Sbjct: 68 RSRVAVFLHQYENLRRDVAQLAAGQEAELRVVVGDLCPLSETLGPLKQFFETSTGT-RLA 126 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 + E +G W+ + N ++ D L I+ E+ ++ AP F+ +P Sbjct: 127 LLFEAISGPWERLRNGDCDLIFHHLDKL--SPAIETIELFDVKLVPVAAP----GFLRQP 180 Query: 189 IAES----QLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ES +R Y ++ DT+ + +L+ G + VPD K + + G G + Sbjct: 181 LDESLTPDDVRPYVQCVIRDTSKQPSDANYYLIEGAPTCTVPDQLMKRELIVQGLAWGHM 240 Query: 245 PDYMVREAMTQSLLVT 260 P ++V + + LV+ Sbjct: 241 PSHLVAADLKEHRLVS 256 >UniRef50_B4SLV6 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SLV6_STRM5 Length = 283 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 11/184 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E+L AF AA GSFS AA L T S +S I +E L V LF RS R +LTE+ Sbjct: 3 YSPESLQAFVEAAALGSFSAAARRLRKTQSTVSTAIAHLEADLGVSLFDRSGRYPQLTEA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A ++L +++ ++ +E R+ + + +Y R+LQ + FP Sbjct: 63 GRQVLGHAQEILAADTRLQQLSVRLAAPVEPRLTVAFSD-VYQLDPEQRVLQRFAEAFPE 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAI-----GAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 ++ V + + N +A + + PD L+ ++E+ +A + Sbjct: 122 IELEWLDAEGEDVLELVSNGRAALGLLPRQEHYPDGLVARPLAHHSELSVY-----VARE 176 Query: 180 HPLA 183 HPLA Sbjct: 177 HPLA 180 >UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gammaproteobacteria RepID=B8CJ29_SHEPW Length = 292 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 57/312 (18%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E L F A GSFS A LG SA+S I +E L+ LF RS+R LT Sbjct: 1 MYNLEQLRMFVETAESGSFSACARRLGKVQSAVSQGIANLEIELNTNLFDRSSRKPSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G A +L Y + + ++ E +++ I+ L AR+L + FP Sbjct: 61 HGERLLPFAQAILRQTYELDSVTNALNLFHETEIKLAIDDALL--PMMARILDSFAEHFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPD--TLLDGG---------------GIDYTE 166 + E+Y A+ PD +L+DGG +D Sbjct: 119 GTNL----ELY--------------AVATPDVLSLVDGGKADLGLMFASSEFPQKVDVCY 160 Query: 167 IGAIRWAFAIAPDHPLA-----FVPEPIAESQLRLYPNIMVEDTAHT--INKKVGWLLHG 219 +G + + ++P HPLA V + I QL L ++ + AH+ ++ + W G Sbjct: 161 VGNMPFNGVVSPAHPLAELNMVTVADLIPHRQL-LIRSLDGQALAHSPIVSSHIWW---G 216 Query: 220 QESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLAT 276 FN G G G++P YM + Q +V Q+ H P + + Sbjct: 217 NS------FNAINALVKQGLGWGYVPSYMAEQYERQGEMVCLQLSFDHKPWRVPIDRVMA 270 Query: 277 QHSATGQVTQWI 288 + G W+ Sbjct: 271 KQKTKGPALTWL 282 >UniRef50_Q11LB7 Transcriptional regulator, LysR family n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LB7_MESSB Length = 311 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 23/268 (8%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN+ F E F AR SFS AAE L T +AIS I+ +E L V L R++RS+ Sbjct: 15 MNTRFLE----TFVWVARLRSFSAAAERLNSTQAAISNRIRALEAELGVKLLDRNSRSVT 70 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHT--ARLLQVL 118 LT GR F KA ++N A + I+ V I I + T HT +++ Sbjct: 71 LTREGRVAFAKAQRIVNLASAFVLDVSH-PDAIQGSVSIGI---IDTIIHTWFPDFAKLM 126 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 ++ FP ++++T + ++ + + + ++A G D G E+G + +P Sbjct: 127 REAFPMLKLSLTVDATPKLYQQLQHGELDLAFGVGSAASD--GFYAVELGTFDCVWVGSP 184 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPD--FNTKCQCQI 236 + P IA+ + +V + ++ + L G+ +I + + FNT I Sbjct: 185 ASRFSSPPTSIAD----IEDCPIVSYSVGSVPDQSLRALLGRHAIPLENRVFNTNSLPTI 240 Query: 237 L-----GEGIGFLPDYMVREAMTQSLLV 259 + G GI +LP+ ++R ++ L+ Sbjct: 241 IHLVREGVGIAYLPECIIRPLISSKELI 268 >UniRef50_Q13N87 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=Q13N87_BURXL Length = 343 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 2/118 (1%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L F AAR G+F++AA+EL ++ A+S + RME L V LF R IELTE+GR + Sbjct: 14 LFVFEAAARCGNFTRAAQELYVSQPAVSRMLSRMEDHLGVRLFERVRGGIELTENGRILY 73 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 RK ++ N + R I+ + G+E+ V + ++ T R+ + L + FP + Sbjct: 74 RKISEGFNGIESAIREIEARATGVES-VTLSVSTAFTTHWLMPRMSR-LNQAFPNVDL 129 >UniRef50_B4SML6 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SML6_STRM5 Length = 301 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 66/259 (25%), Positives = 122/259 (47%), Gaps = 24/259 (9%) Query: 9 NLL-AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 NL+ AF G ++AAE+LG++ + +S ++ +E L VVL R+TR + LTE+G Sbjct: 5 NLMRAFRRIVERGGLARAAEDLGMSPAGLSKQLRTLEAHLGVVLLQRTTRRMSLTETGHA 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 ++R+ LL++ A++R I + R+R+ Q + + LL +Q P + Sbjct: 65 YYRECCRLLDELEALERGIAEQRGDVAGRLRVNAPQ-SFALSTLSPLLPRFLQQHPQLSL 123 Query: 128 TVTTEVYNGVWDAIINN-QANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + E + + DA+ ++ + A LD + + +++ AP + L P Sbjct: 124 DLVME--DRLLDAVGEGFDVSLRLRAE---LDDSRLVARRLASLQQVLCAAPSY-LQQHP 177 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVG-WLL---HGQESILVPDFNTKCQCQIL----- 237 P A +L+ + + A++++ G W L GQ +I +P T +L Sbjct: 178 APQAVDELQAHSVL-----AYSLSDSPGSWPLLGPDGQVTITLPARVTVNNSLLLRDLLV 232 Query: 238 -GEGIGFLPDYMVREAMTQ 255 G GIG LP ++ A+ + Sbjct: 233 AGMGIGALPSFLAAPALAR 251 >UniRef50_B6R986 Transcriptional regulator, LysR family, putative n=2 Tax=Pseudovibrio sp. JE062 RepID=B6R986_9RHOB Length = 291 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 6/253 (2%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 ++L +T GSF A+E+L SA+SY++K++E + +F RS ELT G+ Sbjct: 5 DHLNVISTICEVGSFQLASEKLNKARSAVSYSVKQVEEFYQLQIFDRSKYRPELTPEGKT 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 + LL A + + + E +R+ ++ ++ LL+ L+ +FP I Sbjct: 65 LLVQIRRLLEQAKAFEDSVKDLKGENEPEIRLAVSS-IFPVTWITDLLKSLRTKFPQTTI 123 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + EV +G +++ ++AI A T +DY I I+ P Sbjct: 124 HLDVEVASGE-RMLLSESVDMAIFAAPT--RNASLDYKPITNKDVPLVISDVLIGEAAPH 180 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDY 247 + + L +P I+V+ ++ + G LL V D K G G G LP + Sbjct: 181 SLTRASLAEHPQIVVK-SSDAQSPDTG-LLADAPKWYVTDLQAKKDLITSGLGWGRLPHH 238 Query: 248 MVREAMTQSLLVT 260 M+ + +++ +L T Sbjct: 239 MIAQELSEGVLKT 251 >UniRef50_B8IMI0 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=B8IMI0_METNO Length = 310 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 6/141 (4%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L AF A GSF+ AA +L L+ SA+ + R+E L LF R+TRS+ LTE G+ F Sbjct: 10 DLPAFVAAVEAGSFASAAAKLNLSRSAVGKAVTRLEGRLGTRLFHRTTRSLALTEDGQAF 69 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 F L D A + +++ + + R+R+ + +L+ + A +L L + P ++ Sbjct: 70 FESCRRALGDLQAARAMLESGRRDVAGRLRVSV-PVLFGRRCIAPVLVQLVEAHPRLELD 128 Query: 129 VT-----TEVYNGVWDAIINN 144 + +V +D ++ N Sbjct: 129 LNFNDRLVDVVEDGFDLVVRN 149 >UniRef50_A6FA48 Putative transcriptional regulator with periplasmic binding proteindomain (LysR family) n=1 Tax=Moritella sp. PE36 RepID=A6FA48_9GAMM Length = 301 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 68/292 (23%), Positives = 123/292 (42%), Gaps = 17/292 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E F GSF AA+ L + S+ISY I++++ L V LF + R +T+ G+ Sbjct: 10 EQWYIFKIVVEQGSFQGAADYLIKSQSSISYAIQKLQDNLGVRLFEQQGRRAVVTDMGKK 69 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A +LL +I++ S G E +++ Q L+ + +L + +Q I Sbjct: 70 MLTQANELLTQAASIEQLAGEYSAGWEPLLKVMTTQ-LFPQQLLTDVLVLFAQQCTVTSI 128 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 +GV DA A++ I + G ++ + + + HPLA + Sbjct: 129 DFQQGTLSGVTDAATYGTADLIISSQIP----TGFTGEKLCPAQLSRFVHHQHPLALLNR 184 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDY 247 P+ ++L+ + I++ D++ + GW L Q+ V +F+ G G LP Sbjct: 185 PLTLAELKSHAQIVMSDSSALRSVDAGW-LGSQQRWTVNNFHESLSLVKQGVGHATLPVS 243 Query: 248 MVREAMTQSLLVTRQIHNP-RQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 +++ + LV I + R D + L + KK P G+L Sbjct: 244 RIQDELANGELVELIIEDHVRLDLSLYLVCAN----------KKTLGPAGLL 285 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 76/288 (26%), Positives = 111/288 (38%), Gaps = 57/288 (19%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 ++L+ FTT + +F+ AA +LGLT SA+S I +E L V L R+TRS+ TE+G+ Sbjct: 5 DSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTEAGQL 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 FF + + LL D + + + ++I TP +L + QF Sbjct: 65 FFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISA-----TPTFGRAMLMKIFAQF----- 114 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 E Y V N D L G+D G I A + V Sbjct: 115 ---LEQYPDV---------NF-----DLTLADKGLDLVREG-IDLAIHLGSLQDSRLVAR 156 Query: 188 PIAESQLRLY-----------PNIMVEDTAHTINKKVG-------W---------LLHGQ 220 P+A ++ L P + E H I G W L + Sbjct: 157 PVARQKVILVGSKEYLAEHGQPEALNELVNHFILMVSGIDFAEPRWIKRFIKEAGLSNKD 216 Query: 221 ESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLV--TRQIHNP 266 V D +T C+ + G G+ LP YM+RE + LV IH P Sbjct: 217 RRFTVNDLDTLCEAALNGMGLAALPVYMIREHLDSGKLVHILPDIHFP 264 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 11/183 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F ++ AF A GSF AA+ L ++ A+S ++++E + LF R+TR +EL+ Sbjct: 3 FDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVELSAI 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFP 123 GR F KA +L++ + +S + +V + C+ P A ++ +++FP Sbjct: 63 GRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPS--SVPHLLAGAVEAFQRKFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAI---GAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ + E + A++ ++A+ + GA + L+ G+ + A P H Sbjct: 121 RIRVRLIDETATEILLAVVRSEADFGVSYWGAQEPDLEFQGLVQEP-----FVLACLPGH 175 Query: 181 PLA 183 PLA Sbjct: 176 PLA 178 >UniRef50_A8SN43 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SN43_9FIRM Length = 330 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 17/200 (8%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L F T + SF+K A+ L +T +++ I+ +E+ L+ LF R+ RS+ LT++G + Sbjct: 26 LETFITIVKTKSFTKTADVLYITQPSVTNHIQALESELNTSLFVRTRRSVTLTQAGSIVY 85 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTA--RLLQVLKKQFPTCQI 127 + A ++L + I R +D SQ ++ + IC++ + P+ L++ K FP Sbjct: 86 KHALNILASYDEIIRDLDIYSQNLKGTLNICVSSV---PRKIILPNLIEKFSKLFPDISF 142 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 ++ + V D+I+ +G D GI +I + + D + +V Sbjct: 143 NISNDDSRTVIDSIL-------VGETD-----FGIVGLKISNPKLIYTQIMDDHIVYVVN 190 Query: 188 PIAESQLRLYPNIMVEDTAH 207 A L+ Y I +ED ++ Sbjct: 191 KDAYPDLKNYSVINIEDLSN 210 >UniRef50_Q6MPF3 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q6MPF3_BDEBA Length = 299 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 6/140 (4%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L+A A +F+ AA ELG++ SA+S IK++E L V L +R+TRS LTE+G Sbjct: 7 DGLIALKLVAERRNFTAAATELGVSASAVSQAIKQLEGRLGVALLSRTTRSTSLTEAGEQ 66 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F +A L+ + + T +Q +R+ + +++Y P A ++ +K+FP + Sbjct: 67 FLAQAGPALDQILSALANVGTYAQKPSGLLRLNMPRMIY-PWFLAPIIASFRKKFPEVAV 125 Query: 128 TV-----TTEVYNGVWDAII 142 + T++V +DA I Sbjct: 126 ELFFEDATSDVIGQGFDAGI 145 >UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marinobacter algicola DG893 RepID=A6EVZ7_9ALTE Length = 304 Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 30/268 (11%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F+T GSFSKAA LT SA S I R+E L L RSTR ++LT GR+F+ + Sbjct: 15 FSTVVEQGSFSKAARVCRLTPSAASKAITRLEKRLGTKLIHRSTRQMQLTAEGRWFYERC 74 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYT---PKHTARLLQVLKK---QFP--T 124 +L+D ++ QG + V L T P L+ ++ K ++P T Sbjct: 75 RHILSD-------LEEAEQGASSSVE-PTGHLRITASFPVGHGFLIPIVTKFLARYPGIT 126 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++++T +V N ++ ++AI + L + ++G R AP++ L Sbjct: 127 LELSLTDQVVN-----LLAEHTDVAIR--NGPLGNSNLVARKLGETRMVIVGAPEY-LER 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGW-----LLHGQESILVPDFNTKCQCQILGE 239 P+ +LR + + + HT + + L Q S+LV D T + + G Sbjct: 179 RGVPVTLEELRTHNRLGFNFSRHTATWPLTFDGEQTELAPQGSLLVSDGETMRKMAMEGV 238 Query: 240 GIGFLPDYMVREAMTQSLLV-TRQIHNP 266 G+ L ++V E + Q LV + HNP Sbjct: 239 GLARLTRFLVDEDIRQGRLVPVMEEHNP 266 >UniRef50_Q1D138 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D138_MYXXD Length = 298 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/245 (23%), Positives = 106/245 (43%), Gaps = 6/245 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E+ A AR G+F+ AAE L +A+ Y ++ +E ++ L R LT +G Sbjct: 7 TLEHARALDALARHGTFTAAAEALRKGHTAVMYALRTLEAQTELTLLDRRGYRTRLTPAG 66 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 LL ++ I G E +RI + ++ + R+L+ L+ + + Sbjct: 67 ERILEHCRKLLAAERELEAACAEIRAGWEPALRIVFDG-IFPAEPLLRVLKELRAEGAST 125 Query: 126 QITVTTEVYNGVWDAIINNQANIAIG-APDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + V+ E +GV A + +AN+ + P T+ G+ + ++ HPLA Sbjct: 126 RFHVSAEFLSGVEAAFVREEANLMVTLLPPTV---PGLRTYRLPELKAILVAHRGHPLAR 182 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P+ + L + + V + + G L + ++ + DF K + G G G+L Sbjct: 183 RRGPLKDEDLAEHLVLTVRGSDPRLQLSTGE-LEARSTVHLNDFAAKKAAILEGLGFGWL 241 Query: 245 PDYMV 249 P+YM Sbjct: 242 PEYMA 246 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 9/179 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E+L AF A SF AA+ + L+ A++ I+++E L V L R+TR + LT GR Sbjct: 19 EDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVSLTAVGRD 78 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFPTCQ 126 F +A +L+D + I++ V I CI Y ++ ++FP + Sbjct: 79 FLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTAAY--YFLPDVISAFTEEFPAIR 136 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIA--PDHPLA 183 + N V +I+N +A+ I TLL D T I F +A DHPLA Sbjct: 137 FRIFDAGANEVLQSILNREADFGI----TLLGADDPDVTFDPLIEEPFLLACRRDHPLA 191 >UniRef50_O66882 Transcriptional regulator (LysR family) n=1 Tax=Aquifex aeolicus RepID=O66882_AQUAE Length = 303 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/246 (26%), Positives = 110/246 (44%), Gaps = 24/246 (9%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L F T A GSFSKA+E L +T A++ IK +E + LF R + LTE G+ Sbjct: 6 KLKTFVTVAELGSFSKASEVLYITQPAVTQQIKALEKTVGAKLFQRQGGRMVLTEEGKRI 65 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH--TARLLQVLKKQFPTCQ 126 + A LLN + + I I + ++ + + ++ TP +++ K+FP+ + Sbjct: 66 YEIAKLLLNSYEGLMEEIARIKKDLKDTLFLVLSA---TPSEYIIPKIIAEFHKEFPSSK 122 Query: 127 ITVTTEVYNGVWDAIINNQANIAI---GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + T + V + +++ N+ I D +D I + E + + + P+HP+A Sbjct: 123 IKIFTGNSHDVEEGLVSGVLNVGIIERKPSDKFVD---IPFLEDEIVFFTY---PEHPIA 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQC-------QI 236 E E RLY +V AH+ +K+ + I+ N K + QI Sbjct: 177 KEGEIEPE---RLYELDLVMREAHSGTRKLVREKLEELGIMFDKLNIKIESTSSRNIIQI 233 Query: 237 LGEGIG 242 + G G Sbjct: 234 VKNGYG 239 >UniRef50_A8TW95 Transcriptional regulatory protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TW95_9PROT Length = 302 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 20/123 (16%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S L+ F +AR GSF AA+ELGLT SA+S+ ++ +E GL V LF R R + Sbjct: 1 MGSNLPLRALVVFEASARLGSFRAAADELGLTPSAVSHQVRSLEAGLGVDLFERIGRGVT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L++ GR F + + F +KR ++ + + + R LQV++ Sbjct: 61 LSQDGRDLF---AGIRDGFELVKRAVEATRR-----------------RRSGRTLQVVRL 100 Query: 121 QFP 123 Q P Sbjct: 101 QTP 103 >UniRef50_A8FSN0 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A8FSN0_SHESH Length = 292 Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 4/179 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L++F T GSFS AA +LG SA+S I ME D+ LF RS R +LT++G Sbjct: 3 TIEQLISFVTTVESGSFSAAARKLGKVQSAVSQNIMNMEIDTDLYLFDRSGRYPKLTKAG 62 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQ-LLYTPKHTARLLQVLKKQFPT 124 +A ++ + +++ + E ++ + I++ + Y+ LL L+ Q P Sbjct: 63 EKLLPQAKAVIAQHRRLDQQVKALESDEELKLTLAIDEGIPYSG--LIDLLPQLEAQHPQ 120 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ V + + +A + D + ID+ +G +++ ++P H LA Sbjct: 121 LQLEFLCASSQDVIQLVADKRATSGLVFSDNVY-PEMIDFETLGTVQFELLVSPKHVLA 178 >UniRef50_A5N2N1 Predicted transcriptional regulator n=3 Tax=Clostridium RepID=A5N2N1_CLOK5 Length = 298 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 19/198 (9%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 NL+ F S+SKAA+ELG S I+ I+ +E L++ LF R RSI+LT G F Sbjct: 5 NLITFCKITHLKSYSKAAKELGYAQSTITTQIQLLEQELNIKLFERIGRSIKLTSKGLIF 64 Query: 69 FRKATDLLNDFYAIKRRID--TISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + A +++N + K I+ I G +RI + L T K LL+ K++P + Sbjct: 65 LKYAQNIVNLAHEAKEAINDTDIPTG---TLRIGTVESLCTMK-LPELLRNYHKKYPDVE 120 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I + + + + D + NN ++ D ++D I ++ + P+A + Sbjct: 121 IIIKLGICSDLRDMLKNNIVDLIFILDDPVMDSDLIS-----------CMSYNEPMAVLA 169 Query: 187 EPIAESQLRLYPNIMVED 204 P+ ++L N+ +ED Sbjct: 170 SPL--NKLAYKNNLTIED 185 >UniRef50_C8T378 LysR family transcriptional regulator n=1 Tax=Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884 RepID=C8T378_KLEPR Length = 321 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 9/182 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F +L AF +GSF AAE + L+ SA+S I+++ET L LF R+TR + LT Sbjct: 27 FDFNDLYAFRALMEYGSFRLAAESICLSQSALSRRIEKLETALGNRLFDRTTRRVTLTLY 86 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQ---GIEARVRICINQLLYTPKHTARLLQVLKKQ 121 G+ F ++ LL + I +S+ G+ + + P+ +++ + + Sbjct: 87 GQNFAERSEQLLAHVETVLADISQVSKARTGLVTVATVPSAAYYFMPE----IIRSFQAR 142 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P +I + V +A+ + QA+ + L I++T + R+ A DHP Sbjct: 143 YPQVRIRLIDSSVGNVIEAVSSGQADFGLCFAKNL--PASIEFTPLADDRYVAACRHDHP 200 Query: 182 LA 183 LA Sbjct: 201 LA 202 >UniRef50_A1ZLC1 Transcriptional Regulator, LysR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZLC1_9SPHI Length = 301 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 46/167 (27%), Positives = 85/167 (50%), Gaps = 10/167 (5%) Query: 21 SFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFY 80 +FS+AA++L ++ +S IK +E L LF R+T+S+ LT+ G F+ +A LL+ Sbjct: 17 NFSQAAKKLHISQPPLSRHIKALEAELGTTLFYRNTQSVRLTKEGELFYEEAKALLSQVK 76 Query: 81 AIKRRIDTISQGIEARVRICI---NQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGV 137 ++ TI + +V+I LL+ P LL+ ++ P Q+ +T Y Sbjct: 77 GAVSKLKTIVKSAPTQVQIGFVRPAMLLFLPG----LLKTFRQSHPHIQVNITEINYPET 132 Query: 138 WDA-IINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++NNQ + A +L + + Y ++ + + + P+HPLA Sbjct: 133 TKSMLLNNQLDAAFSHSASLCN--DLVYHQVFSEQLKLVMLPNHPLA 177 >UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CU34_VARPS Length = 341 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 1/152 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M I T + F A GSF A L SA+S+ I +E L V LF RS Sbjct: 1 MLDILTLSQMQMFVAVADAGSFRAGAARLHRVQSAVSHAIANLEEQLQVRLFDRSGHKPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G+ +L+ A++ R + QGIE + + ++ L+ P A L+ + Sbjct: 61 LTPTGKALLGDVRVILSKVEALRSRAQGLEQGIELGLAVAVDT-LFPPNLLASALRGMHA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGA 152 +P+ I V G DA+ + + ++AI A Sbjct: 120 VYPSIAIRVEYSSMGGTVDALNSGRCDLAIAA 151 >UniRef50_B5EV58 Transcriptional regulator, LysR family n=2 Tax=Vibrio fischeri RepID=B5EV58_VIBFM Length = 302 Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 26/265 (9%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E+ L F A++ SFS+AA L + T+ +S I+ +E+ L LF R+TRS+ LTE G+ Sbjct: 4 EDWLLFAKVAQYQSFSEAARRLSVPTTTVSRRIQNLESQLGERLFIRNTRSVVLTELGQR 63 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 K L + I++ SQ I ++++ + L + L+ Q+P Sbjct: 64 LLPKTKLLEMALGELHSTIESHSQEISGKLKLSTSDTL-SQFLIPNLISTFSLQYPLINF 122 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 +++ N + ++N NI LL+ + ++ I + AP Sbjct: 123 DISSSNRN---EQLLN--ENIDFSFRIGLLEDSNLIAYKLCEIEYVLVAAPSF------- 170 Query: 188 PIAESQLRLYPNIMVEDTAHTIN---KKVGWLLHGQESILVPDFNTKCQCQIL------- 237 I S + + + +++ IN K+V W + + +L + + K + L Sbjct: 171 -IENSTIDITLDTLIQHPCIIINIDGKEVPWCVSSDDHVLELNRHKKYRVDNLFIAKSLA 229 Query: 238 --GEGIGFLPDYMVREAMTQSLLVT 260 G GI LP ++ +EA+ + LVT Sbjct: 230 EAGSGIALLPKFVAKEAIRTNTLVT 254 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 21/263 (7%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRI---DTISQG---IEARVRICINQLLYTPKHTARLLQVLK 119 +FR+ +L + A + I +G I+A + ++ L+ L++ + Sbjct: 64 ERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVLHFLM-------PLIKPFR 116 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +++P +++ V + +I + ++AI A TL D + R A +PD Sbjct: 117 ERYPEVTLSL---VSSETIINLIERKVDVAIRA-GTLTDSSLRARPLFNSYRKIIA-SPD 171 Query: 180 HPLAF-VPEPIAESQLRLYPNIMVEDTAHT--INKKVGWLLHGQESILVPDFNTKCQCQI 236 + + PE I + + + + +T I + G L + + T Q + Sbjct: 172 YISRYGKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCL 231 Query: 237 LGEGIGFLPDYMVREAMTQSLLV 259 G GI L DYM+ + + + LV Sbjct: 232 SGNGIACLSDYMIDKEIARGELV 254 >UniRef50_Q13FG1 Transcriptional regulator, LysR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FG1_BURXL Length = 313 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 42/153 (27%), Positives = 81/153 (52%), Gaps = 7/153 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+++ + +++ AF A+ GSF++AA+ L LT S+++ I ++E L V LF+R++R +E Sbjct: 1 MSTVVSLKHMRAFLAVAQMGSFTRAADILHLTQSSVTALIAQLENSLGVRLFSRNSRHVE 60 Query: 61 LTESGRYFFRKATDLLNDFYAI---KRRIDTISQGIEARVRICINQLLYTPKHTARLLQV 117 LT +G +A L+ DF + RR T+ +G+ RV ++ + Y Sbjct: 61 LTAAGTDLLPRARRLVGDFDGLVDDMRRYGTLEKGV-VRVYSALSAMEYLAAPAV---AA 116 Query: 118 LKKQFPTCQITVTTEVYNGVWDAIINNQANIAI 150 K +P+ ++ + Y + DA+ + + I Sbjct: 117 FAKLYPSIRVQLQDGWYRQIIDAVSSGTVDFGI 149 >UniRef50_Q01ZX8 Transcriptional regulator, LysR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZX8_SOLUE Length = 277 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 38/264 (14%) Query: 22 FSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYA 81 S+ AE G++ SA S ++ +E L V L RS R +ELT +GR + ++L Sbjct: 1 MSRGAEHCGVSQSAASQHVQEVERRLGVTLLDRSKRPLELTPAGRLYQEFCREVLRREEE 60 Query: 82 IKRRIDTISQGIEARVRICINQLLYTP--KHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 +++I +E VRI +Y+ +RL + ++PT Q+ V + +++ Sbjct: 61 FTLSLESIKGDVEGTVRIVS---IYSTGLSEMSRLREEFAARYPTAQLHVEYMRPDKIYE 117 Query: 140 AIINNQANIA-IGAPDTLLDGGGIDYTEIGAIRWA-----FAIAPDHPLAFVPEPIAESQ 193 A+ + A++ + P+ EI AI W A+ P HP A S+ Sbjct: 118 AVRRDTADLGLVSYPEA--------SREIAAIPWREEEMHVAVPPSHPFA--------SR 161 Query: 194 LRLYP------NIMVEDTAHTINKKVGWLLHGQ--ESILVPDFNT---KCQCQILGEGIG 242 ++P + + D I +++ L Q E LV F+ + LG GI Sbjct: 162 DEVFPADLTGQDFIGFDEDLRIRRELDRFLRAQAVEVNLVMHFDNIQMIKEAVALGSGIS 221 Query: 243 FLPDYMVREAMTQSLLVTRQIHNP 266 LP ++ + Q LV ++H P Sbjct: 222 ILPARTMQAEIEQGRLVAVKLHAP 245 >UniRef50_Q6FDZ3 Putative transcriptional regulator n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FDZ3_ACIAD Length = 307 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 70/139 (50%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF + S+AA L + ++ I+ +E L+ L R R +E+TE+G+ + Sbjct: 7 LNAFVAVVEESNISRAANRLHMQQPPLTRLIQSLEQDLNTTLLKRLPRGVEVTEAGKVLY 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 ++A +L +I +R+ I+QG E ++ I + LL+ +++FP I + Sbjct: 67 QEAVTILAHASSIPQRVQNIAQGKEGQINIGFTHSIGLHPFLPTLLRHFREKFPAVSIHL 126 Query: 130 TTEVYNGVWDAIINNQANI 148 + + + DA+IN + +I Sbjct: 127 EEDSSSALTDAVINEKLDI 145 >UniRef50_C3RPN8 Transcriptional regulator n=2 Tax=Bacteria RepID=C3RPN8_9MOLU Length = 293 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 4/171 (2%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F GSFS AA +L L+ SA+S I +E L V LF RS LT +G ++F+K Sbjct: 9 FIATVETGSFSGAARKLMLSQSAVSQQINLLEEELAVKLFDRSNYRPRLTRAGEFYFKKC 68 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 +L+ + + + I +RI I + H L+++ K+++P +IT+ Sbjct: 69 QELVAIYEKMNHEVKLIDS---YSIRIGITG-PFENHHIPFLVKLFKEKYPQIEITIIKG 124 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + NNQ ++A + ++ I Y + + + +HP A Sbjct: 125 SFQSCKEWLNNNQIDVAFAIENDFINEPKITYEVLLQHQICAICSYEHPWA 175 >UniRef50_Q97DR3 Transcriptional regulators, LysR family n=1 Tax=Clostridium acetobutylicum RepID=Q97DR3_CLOAB Length = 319 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 3/172 (1%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F + A++ SF+KAAEE + +AIS I +E L+V LF R+ R++ELT++GR ++A Sbjct: 31 FISVAKYLSFTKAAEEHHIAQTAISQQISTLEKQLNVKLFVRNNRAVELTDAGRVLLKEA 90 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH-TARLLQVLKKQFPTCQITVTT 131 + + +R+ + G E + + I L + K+ +L+ K +P I ++ Sbjct: 91 DLITSRVVEAERKTKQAALGFEGSLNVGI--LGSSEKNFLPVILKRFHKLYPKIGINLSR 148 Query: 132 EVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Y + D + +I P L D + Y ++ + +H LA Sbjct: 149 NSYKKLADDMKGGHLDITFIFPYELNDISHVKYRKLFDYEICLVVNKEHRLA 200 >UniRef50_D0BX34 LysR family transcriptional regulator n=1 Tax=Acinetobacter sp. RUH2624 RepID=D0BX34_9GAMM Length = 311 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 55/97 (56%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T NL +F +A GSFS AA L LT +A+S + ++E L V LF RSTR++ LTE+G Sbjct: 3 TLSNLESFIRSAEHGSFSAAARHLALTPAAVSRNVAQLEQNLGVRLFHRSTRNLTLTEAG 62 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICIN 102 +FF D LN+ +T S + ++I ++ Sbjct: 63 EHFFTSIRDNLNNIQTTISEFNTDSSHPKGTLKISLS 99 >UniRef50_Q1GID9 Transcriptional regulator, LysR family n=5 Tax=Rhodobacteraceae RepID=Q1GID9_SILST Length = 295 Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 7/134 (5%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF +AR G+F+ AA+ELGLT SA+SY ++ +E L LF R +S+ LT G+ + Sbjct: 11 LRAFDASARLGNFTLAAQELGLTPSAVSYQVRGLEATLGHKLFVRKQKSLFLTRLGQAYL 70 Query: 70 RKATDLLNDFYAIKRRI--DTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 + D A + + +Q I R +N L P+ L + Q P C++ Sbjct: 71 PVVSKAFGDLEATTSNLFGKSAAQEITLRCLSSLNMLWLAPR-----LSRFQAQHPDCRL 125 Query: 128 TVTTEVYNGVWDAI 141 V + ++ +A+ Sbjct: 126 RVLSALWGETPEAL 139 >UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A6UK87_SINMW Length = 306 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 65/269 (24%), Positives = 112/269 (41%), Gaps = 21/269 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + + F A GSF AA L SA+S+ + +E L V LF RS Sbjct: 1 MLDALTLDQMRIFVAIAEAGSFRAAASRLSRVQSAVSHAVANLEAELGVSLFDRSGHRPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR A +L ++ R + +G+E + I ++ + P L+ + + Sbjct: 61 LTPAGRSLLSDARAILLKTDTMRARARGLGEGVELGLTIALDP-QFPPVLACAALKEMHR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P+ I V T A+ + +AI D L I+ + ++ A +A H Sbjct: 120 AYPSVAIRVLTASLGEAVHALRERRCALAISGID--LPDPHIERRALALVQRAAVVAASH 177 Query: 181 PLAFVPE---PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE-SILVP------DFNT 230 PL + P+ + L + ++ ED + L G++ ++L P D T Sbjct: 178 PLGILAAAGGPVTATDLADHVQVVAEDPSP--------LTQGRDFNVLSPGTWRVGDNVT 229 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLV 259 K + G G G LP ++V + + +V Sbjct: 230 KHALILAGIGWGNLPLWLVERDLAEGRVV 258 >UniRef50_A2WII2 Transcriptional regulator n=4 Tax=Proteobacteria RepID=A2WII2_9BURK Length = 303 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 20/254 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M ++ ++ F A+F SFS+AA LG+ S +S + +E L L R+TR + Sbjct: 1 MTALADLNDIAVFVRVAQFESFSRAARALGMPVSTVSRKVSALEERLGATLLQRTTRKLS 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT GR +F + ++ L+ Y +R I + E +RI +L A L K Sbjct: 61 LTAQGRAYFDQCSEPLSHLYDAERVITQTQKKPEGVLRISGPVMLEQEPFYA-FLSAFLK 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD- 179 +P QI V N D I N +IAI + L + +G ++ D Sbjct: 120 DYP--QIQVDLYFTNAFIDLIAEN-VDIAIRFGE--LQDSSLVAQRVGRSVRQLVVSADY 174 Query: 180 ---HPLAFVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQESILVPDFNTK 231 H L PE +++ +P +++ E ++++ +H + DF+ Sbjct: 175 ARTHTLPSRPEELSQ-----HPCVLINARNNETEWQLVSRRKAVKVHVSGPVAARDFHIV 229 Query: 232 CQCQILGEGIGFLP 245 + G GI LP Sbjct: 230 HAFALRGHGIALLP 243 >UniRef50_C4KR89 Transcriptional regulator, LysR family n=67 Tax=Proteobacteria RepID=C4KR89_BURPS Length = 338 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 19/187 (10%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F L AFTT A GS +AA+ L +T A+S +KR+E + LF R ++ ++LT Sbjct: 37 FDLRQLRAFTTIAASGSLGRAADALHVTQPALSRILKRLEEQIGAPLFERHSKGVQLTAI 96 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQL--LYTPKHTARLLQVLKKQ 121 G AT L ++ + ID + + +++ + + L P R+L + Sbjct: 97 GEALLPHATLLQHEAEHAREEIDALRGLAKGTIKVGAVGSIASLVLPVALGRVLD----R 152 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIG--APDTLLDGGGIDYTEIGAIRW----AFA 175 +P ++ + V++ + DA++ ++ +IA+ PDT + I RW Sbjct: 153 WPNLRVVIVEGVWDRLVDALLTHEIDIALSTRVPDT------DEVVAIAECRWDDVSHVV 206 Query: 176 IAPDHPL 182 APDHPL Sbjct: 207 AAPDHPL 213 >UniRef50_A3RXY4 Transcriptional regulators, LysR family n=5 Tax=Proteobacteria RepID=A3RXY4_RALSO Length = 336 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 20/263 (7%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + + F A G F++AAE L L+ SA+ +I R+ET L V LF R+TR+ LTE G+ Sbjct: 10 DGVAVFVEAVEAGGFARAAERLALSRSAVGKSIARLETRLGVRLFHRTTRTQNLTEDGQI 69 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 ++ + + + + +++ Q + R+R+ + +L+ A +L ++ P ++ Sbjct: 70 YYERCLRAIEELRVAESLLESGKQEVAGRLRMTMP-VLFGRYCIAPILLDFAREHPKLEL 128 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 ++ ++ +I ++ I + L + G+ + APD+ L E Sbjct: 129 ELS---FSDRPVDMIAEGFDLGIRS-GALGEATGLCARPLATQPKVLCAAPDY-LKARGE 183 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVP----------DFNTKCQCQIL 237 P L + ++ T H WLL G + L D + Sbjct: 184 PDTIETLATHDVLIHWRTGHPYP----WLLPGADGRLTEVRLASRLRFDDLEVTADAAVA 239 Query: 238 GEGIGFLPDYMVREAMTQSLLVT 260 G GI +LP ++VR+ + LV Sbjct: 240 GMGIAWLPHWLVRDRIQAGALVA 262 >UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=Q2SQE2_HAHCH Length = 298 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 52/226 (23%), Positives = 101/226 (44%), Gaps = 7/226 (3%) Query: 20 GSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDF 79 G F++AAE + + S + + + ++E L V + R LTE+G+ R++ +LL Sbjct: 19 GGFAQAAEVVHKSQSTVHHAVHKLEEMLGVQILQVQGRKATLTEAGKLLLRRSENLLQQA 78 Query: 80 YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVWD 139 ++ ++QGIEA ++I + +++Y + L +Q+P +I + V +G D Sbjct: 79 EQLESVASGLAQGIEAHIQIAV-EIIYPQEALYCALAEFSEQYPNTRIEIIETVLSGAED 137 Query: 140 AIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPN 199 + ++ I T G I I + P+HPL + + + L + Sbjct: 138 LLKQGVCDLVI----TPFVPQGFIGDLITNIPFTPVANPEHPLHQLNRTLNKEDLARHRQ 193 Query: 200 IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 I++ D+ + + GW L ++ V +T G G +LP Sbjct: 194 IVIRDSG-AVRRNSGW-LGAEQRWTVTHMSTSVNMVKRGLGFTWLP 237 >UniRef50_A6VZK8 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZK8_MARMS Length = 313 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 72/302 (23%), Positives = 129/302 (42%), Gaps = 33/302 (10%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +T + LLAF TAA GSFS AA +L S IS I +E L LF RS++ LT Sbjct: 22 WTLDQLLAFVTAAELGSFSAAARQLQKAQSRISSAISNLELDLGFELFDRSSKFPVLTPL 81 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTAR-LLQVLKKQFP 123 G+ +A +LN + R + + +RI +++ L P T + + FP Sbjct: 82 GKEMLPEARAVLNQCLRLDSRALSAANKEPISLRIALDEAL--PLETIHSIFSQVGDLFP 139 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +T + + AI N +A+I ++ L I + +G + + HPLA Sbjct: 140 NTHLVITNGSQDDIAIAIANQRADIGFMISNSALPPKLISQS-LGYFKKILIVGKKHPLA 198 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPD------FNTKCQCQIL 237 + ++ SQL+ Y ++ + + +E+ L PD + C+ Sbjct: 199 -QEDQLSLSQLQQYRQFVLCNRSG----------ENRENALSPDHWDLDSYYLICELVTQ 247 Query: 238 GEGIGFLPDYMVREA-------MTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 +G +P+++ + + + +S +T Q+ R+ S ++T WI + Sbjct: 248 NQGWAIVPEHIAKASWFYEQIKIAKSDFLTNQLIEVGIVKRL-----DSPNNKLTDWITE 302 Query: 291 QF 292 Q Sbjct: 303 QM 304 >UniRef50_Q1ZUI2 Transcriptional regulator n=1 Tax=Photobacterium angustum S14 RepID=Q1ZUI2_PHOAS Length = 300 Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 43/145 (29%), Positives = 68/145 (46%), Gaps = 6/145 (4%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F + GSFS A++EL ++ S+IS +K +E L R TR++ LTE+G Sbjct: 5 EALRCFVATVKHGSFSAASKELNISVSSISRYVKLLEDEFKSPLLIRHTRTLALTETGLM 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F K + + + + Q I+ +RIC L Y + A LL L K++P I Sbjct: 65 VFEKGSSICQQINQLSEDVAVQQQQIQGNIRICA-PLWYGAHYIAPLLPELTKKWPELTI 123 Query: 128 TVT-----TEVYNGVWDAIINNQAN 147 + + Y +D I+ + N Sbjct: 124 YLNHGEEDLDPYGADYDLYIHMEEN 148 >UniRef50_C4LFL0 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=C4LFL0_TOLAT Length = 305 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 20/258 (7%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 FT AA+ SF+ AA +LG+T+SA+ ++ R+E L + L R+TR + LT G + Sbjct: 12 FTLAAQLQSFTAAALQLGVTSSAVGKSVSRLERRLGIKLLHRTTRKLVLTHEGEVYLSSC 71 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 ++++ I+ + T R+R+ + + +H A +L L KQF +T+T Sbjct: 72 LHIIDELRDIESNMSTGVSEPRGRLRVDLPA-AFGRRHIAPMLIDLSKQFSQLDLTLT-- 128 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 + +I ++A+ D L + + ++G APD+ L P I ++ Sbjct: 129 -FGERTIDMIGEGVDLAVRIGD-LHNDPELVARKLGDQELVICAAPDY-LRNNPPVIDKA 185 Query: 193 QLRLYPNIMVEDTAHTINKKVGWLLHG------QESILV----PDFNTKCQCQILGEGIG 242 L + I+ + WLL Q+ ILV D Q + G G+ Sbjct: 186 DLLQHDCII----GWRKGLRAAWLLKNAKGELEQQQILVRHEFGDGEMMLQATLDGCGLS 241 Query: 243 FLPDYMVREAMTQSLLVT 260 LP +++ E + LVT Sbjct: 242 QLPTWLISEHLQNGALVT 259 >UniRef50_A8IAC4 Transcriptional regulator n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8IAC4_AZOC5 Length = 313 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 9/178 (5%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L AF A+ GSFS+AA LGL+ SA+S ++++E L V L R+TRS++L+ GR F Sbjct: 9 QLRAFVAVAQTGSFSRAARLLGLSQSALSQAVQQLEADLGVRLLDRTTRSVQLSAIGREF 68 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFPTCQI 127 +L D + + + + V + C+ P RLL + QF Sbjct: 69 LPGVQRVLADLDHQLQDLRDLKEHRRGHVTVTCV------PSVALRLLPQVLAQFQEAHP 122 Query: 128 TVTTEVYNGVWDAIIN--NQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 V+ V II + +G + D +D T + +A + DHPLA Sbjct: 123 MVSVAVREAPRHQIITALRSGDAELGVANVPGDDPDLDSTFLLTDSFALVMRRDHPLA 180 >UniRef50_Q1GLV6 Transcriptional regulator, LysR family n=8 Tax=Alphaproteobacteria RepID=Q1GLV6_SILST Length = 305 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 15/164 (9%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M ++LAF AR GS S+AA+ L LT A+S+ I+R+ + V LFTR+ R ++ Sbjct: 1 MERFSNPNSILAFVIVAREGSVSRAADVLNLTQPAVSHQIRRLSEDIGVTLFTRTPRGLD 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPK--HTARLLQVL 118 LT ++ KA ++L +R S I +R+ + P+ RLL L Sbjct: 61 LTPDAQHLLPKAEEVLRVMAEFRRAASQHSDHISGTLRLGT---IIDPEFIRLGRLLSQL 117 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINN------QANIAIGAPDTL 156 P +TTE+ +GV I+ A + APD L Sbjct: 118 GASNP----RITTELVHGVSGEILERILRRQVDAGYYLAAPDQL 157 >UniRef50_B0T518 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T518_CAUSK Length = 316 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + ++AF T AR SF+ AA +L +T +A+S+ +K++E + V LF R+TR + LTE+GR Sbjct: 7 DGVVAFATVARRRSFTAAAADLQVTPAAVSHAVKQLEARIGVALFARTTREVGLTEAGRR 66 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F A + A ++ +G RVR+ I++L + A + + +P ++ Sbjct: 67 FLDGARPAVEAMEAATAAARSLGEGPAGRVRLTISRLAFG-MVLAPAIADFSRAYPDVRL 125 Query: 128 TVTTE 132 V + Sbjct: 126 EVAVD 130 >UniRef50_A1SEX2 LysR, substrate-binding n=11 Tax=Actinomycetales RepID=A1SEX2_NOCSJ Length = 330 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 4/172 (2%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 FT A F +AAE L + A+S I+ +E+ L V LFTR+TR + LT +G YFF ++ Sbjct: 33 FTAVAETCHFGQAAERLLIAQPALSQAIRSLESELGVTLFTRTTRHVALTPAGEYFFDES 92 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 +L R + ++ G VR+ + T H L++ LK++ P + V + Sbjct: 93 RRILAAVEDSTRGVRQLADGRHGLVRLGLVGTAAT-SHLPHLVRTLKRELPEVAVDVKAD 151 Query: 133 VYNG-VWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + D + ++A+ P + G GI+ + A+ H LA Sbjct: 152 ILTPELCDLLRAGAIDVAVLRPPVV--GEGIEIHVVEEEPLILALPESHALA 201 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 63/260 (24%), Positives = 123/260 (47%), Gaps = 21/260 (8%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 +++ + ++L A ++ SF +AA + L+ SA+S I R+E + LF R+TR++E Sbjct: 2 VDANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVE 61 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARV-RICINQLLYTPKHTARLLQVLK 119 LT++G F A ++L D +R + ++ ++ R + + L P A LL + Sbjct: 62 LTDAGHVFIAHAQEILRD---TQRALRAVTDTVQLRTGSVTVAAL---PSLAASLLPKVF 115 Query: 120 KQF----PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFA 175 +F P ++++ + +D + + + + A+ A D + + Y ++ ++ F Sbjct: 116 AEFTRIHPGVRLSLLDTLSGPAFDLVRDGKVDFALTAADPKQE--DLAYEQLMEDQF-FL 172 Query: 176 IAP-DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQC 234 I P DHPL+ P+A YP++ + +A ++ + + LH + P F Sbjct: 173 ICPDDHPLSKHAGPVAIENTLDYPHVSMPSSA-SVRQYIDADLHSKGLYFAPVFEVDHIA 231 Query: 235 QI-----LGEGIGFLPDYMV 249 I G GI LP+ V Sbjct: 232 TIGALVSAGLGISALPETAV 251 >UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB30_9FIRM Length = 316 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 16/264 (6%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L F T GS +K AE+L +T A+S TIK +E V R R + TESGR Sbjct: 5 QLTIFRTVCEEGSMTKTAEKLYMTQPAVSQTIKELEQESGVCFLERYNRKVVPTESGRLL 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 ++ A +L + +++ + ++G+ +RI N L K ++ +K++P Q+ Sbjct: 65 YQYACHILGLYQDLEQHLKE-TEGVRT-IRIGAN-LSVGVKMLRGFIRAFEKKYPDIQVK 121 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE--IGAIRWAFAIAPDHPLAFVP 186 VT + + + +Q I +G + L G DY + R APDHPLA Sbjct: 122 VTVSGSVRLMELLKTHQ--IDLGLMEDL--PGETDYIQEPFAKDRTLIVAAPDHPLAG-K 176 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDF---NTKCQCQIL--GEGI 241 E + L+ N ++ + + + +L ++ ++ P + +TK Q + G GI Sbjct: 177 EHVRFEDLK-KENFLLREKGAGVRDRFEAILRTKDCVIDPLWESRSTKVLVQAVEDGFGI 235 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN 265 LP ++ E + + L ++ + Sbjct: 236 SVLPYCLIEEYLKEGRLAEIKVED 259 >UniRef50_Q1LGP6 Transcriptional regulator, LysR family n=5 Tax=cellular organisms RepID=Q1LGP6_RALME Length = 372 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 21/264 (7%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F +L F A GS + A ++ LT + SY +K +E + V LF R+ + + LT + Sbjct: 72 FELTDLRVFVAIAEAGSLTMGASDMHLTAPSASYRLKNLEQTVGVPLFNRTQKGMVLTAA 131 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQ--LLYTPKHTARLLQVLKKQF 122 G + A +L++ ++ + + GIE +R+ N + P +R L + Sbjct: 132 GETMLQHARTILDNVEQLQIGMRRHTDGIEGHIRVYANSSTMCNLPVALSRFLAA----Y 187 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + + + A+ +A+I + A +D G+D GA F + P HPL Sbjct: 188 PNVNVDLEEHLSADSVRAVQEQRADIGLVA--GAIDLHGLDSILYGADELLFVVPPRHPL 245 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTIN--------KKVGWLLHGQESILVPDFNTKCQC 234 LR + +V + + N + G + H + + P+F +C Sbjct: 246 GMRDSVSLVQALR---HELVSIGSKSSNFLYLQDMATRAGIVPHVR--VHAPNFPAVIRC 300 Query: 235 QILGEGIGFLPDYMVREAMTQSLL 258 G GI +P + A+ Q L+ Sbjct: 301 VQEGAGIALVPRSVAAPAIAQGLV 324 >UniRef50_UPI0001826865 hypothetical protein EcanA3_10858 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001826865 Length = 302 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 1/195 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN + +LLAF AR GS AA ELG++ +S T++ +E L L RS I Sbjct: 1 MNYLPKLGHLLAFRQVARSGSIRSAARELGVSQPGLSRTLRELEQTLGTQLLLRSKEGIT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G F R+A +L + ++ I+ R+ + + L+ + K+ Sbjct: 61 LTEAGMAFSRRAEWVLEELRRAADEVEQINHFTHGRLTVGFSSLIALTVFPG-VADAFKE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P +T + + + + + +IAIG+ D + G+ + + H Sbjct: 120 TLPQVLLTAKEGQLSSLLPGVRSGEIDIAIGSVDPMAPPEGVMIEPLFTSPFCIVARKGH 179 Query: 181 PLAFVPEPIAESQLR 195 PLA E +A Q + Sbjct: 180 PLAEARELMALRQAK 194 >UniRef50_Q71X77 Transcriptional regulator, LysR family n=18 Tax=Listeria RepID=Q71X77_LISMF Length = 299 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 12/175 (6%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F T GSF +AAE L + IS IK++E LDV LF R ++++LT +GR F+ +A Sbjct: 9 FYTVVNTGSFQRAAEVLNYSQPTISMRIKQLEQDLDVQLFERG-KTLKLTHAGRLFYERA 67 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQ---LLYTPKHTARLLQVLKKQFPTCQITV 129 L+ + + I + G +++ I++ L PK +L+ FP + V Sbjct: 68 GQLIAQYEVLDHTIFDLKNGNAGLIKVGISEPSASLVFPK----ILKTFLADFPKLMVNV 123 Query: 130 TTEVYNGVWDAIINNQANIAI-GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + N +I+ + + AI G P+ +L+ Y ++ HPLA Sbjct: 124 SVDDANTCSQKLIDGEIDFAICGEPELILENF---YFPFFHDSLDLIVSESHPLA 175 >UniRef50_A6VPT8 Transcriptional regulator, LysR family n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VPT8_ACTSZ Length = 293 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 10/145 (6%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L + T ++GS + AA LG+T SA+S+ IK++E + L R+TRS+ T++GR Sbjct: 7 LFIYATVLKYGSMNAAAPHLGMTASAVSHHIKQLEKHYQLKLLNRTTRSLSPTDAGRLLL 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEA----RVRICINQLLYTPKHTARLLQVLKKQFPTC 125 A DL+N + ++ D Q + A +V I ++ + ++Q ++ ++P Sbjct: 67 LHANDLVN----LMKQADEAMQNLRAEPVGQVSITLSTVEIHNPSMQWVVQQIRARYPKI 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAI 150 Q+++ +GV + + +N +IAI Sbjct: 123 QLSLLES--DGVVNMLDDNAPDIAI 145 >UniRef50_D0KM97 Transcriptional regulator, LysR family n=1 Tax=Pectobacterium wasabiae WPP163 RepID=D0KM97_PECWW Length = 308 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 8/195 (4%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L F A SF++AA + + S +S IK +E L V L RS I LT G F Sbjct: 5 HLRYFLIVAEEQSFTRAAARVHIEPSPLSRAIKELENYLGVQLLHRSKGRIRLTWPGEVF 64 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 +A ++ + R+ + SQG R+RI + L P+ T LL +++ P+ +I Sbjct: 65 REEAQRIIAFIENAQTRVSSASQGYRGRLRIGLADSLAPPRLTT-LLARCREEEPSTEIR 123 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDG--GGIDYTEIGAIRWAFAIAPDHPLAFVP 186 +T + + A+ ++Q ++ ++++ G + +T+ R A AI HPL Sbjct: 124 ITEMTVSEMLLALSHDQIDVGFTVDNSIIPGYLKEVVWTD----RPAIAIPTHHPL-LSQ 178 Query: 187 EPIAESQLRLYPNIM 201 E I++S++ YP ++ Sbjct: 179 EKISDSEILRYPLVL 193 >UniRef50_P55181 Uncharacterized HTH-type transcriptional regulator yxjO n=1 Tax=Bacillus subtilis RepID=YXJO_BACSU Length = 291 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 39/145 (26%), Positives = 74/145 (51%), Gaps = 1/145 (0%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L F AA SF +AAE L LT A+S ++++E LD+ LF S R + LT+ GR F Sbjct: 6 LQTFIAAAESESFREAAEHLYLTQPAVSQHMRKLEDELDMRLFLHSGRRVVLTDEGRLFL 65 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 A ++++ + A K+++ QG + + ++ + + R L ++ P +++ Sbjct: 66 PYAKEMIHVYQAGKQKVSQWKQGYSRSLTLAVHPYIASYI-LPRFLPAYIQKHPHVELST 124 Query: 130 TTEVYNGVWDAIINNQANIAIGAPD 154 + + A+ +N+A+I + D Sbjct: 125 HVAGSDAIKQAVEHNEADIGLSRKD 149 >UniRef50_A8S6Q7 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6Q7_9FIRM Length = 294 Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 5/129 (3%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F AR GSF+KAA++L LT SAIS+ I ME L LF R + +T G + Sbjct: 9 FDAVARQGSFNKAAQQLHLTPSAISHAIAVMEEELGFALFNRGKNGVSMTSYGASLYPSI 68 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 D+LN A+K+ I ++ + +V++ + + A LL L K F + E Sbjct: 69 RDVLNSDEALKQSIARLNGLEKGKVKLGVFNSV-----CASLLPGLLKSFAAHYPQIEIE 123 Query: 133 VYNGVWDAI 141 VY G +D + Sbjct: 124 VYQGTYDDV 132 >UniRef50_Q2SFE9 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFE9_HAHCH Length = 310 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 16/202 (7%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ +L F T A + + S+A+E L ++ A++ +K +E+ L V LF R+TR I LT Sbjct: 3 LSQRHLQMFVTTAAYCNVSRASEILHISQPALTRALKELESQLGVTLFQRTTRRINLTME 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F A LLND + + G + + + + + A +L+V + FP Sbjct: 63 GERFLPVAQRLLNDMTVAIDMVRGEATGQQGSISLAVGEAFGCTVLPA-VLKVFAQSFPR 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + G+ + N++ + IG+P GA+ ++ PL Sbjct: 122 VRVRIINDNSKGITRRVDNSEVDFGIGSP----------VGNTGALLCTPLLSA--PLGL 169 Query: 185 VPEPIAESQLRLYPNIMVEDTA 206 + +P SQ +L ++ V D A Sbjct: 170 LADP---SQYKLGTDVDVSDLA 188 >UniRef50_A7N2E7 Putative uncharacterized protein n=2 Tax=Vibrio harveyi RepID=A7N2E7_VIBHB Length = 297 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 69/308 (22%), Positives = 122/308 (39%), Gaps = 42/308 (13%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L AF A GSFS+AA +G + + + + +E DV+LF R R+ LTE G Sbjct: 7 DQLTAFVAVAEHGSFSQAARVIGKDRATLHHQVSDLEIDWDVILFERKGRTPVLTEVGAT 66 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A +L +++ D+ SQG + IC + + A + L+KQ+ + I Sbjct: 67 LLTQAKHILYQMQSLELSCDSYSQGDVPEITIC-HDMSVPCDAIADIDLSLRKQYKSTAI 125 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG------GIDYTEIGAIRWAFAIAPDHP 181 + D ++ QA+ A+ +L+ G G+ + +G ++ F Sbjct: 126 HWLHRSRDEALDMLMAKQADFAV-----VLNSGKAFPTEGMSFINLGYPKFTF------- 173 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTA---HTINKKVGWLLHGQESILVPDFNTKCQCQIL- 237 A + PIA+ P + ++D A I + G + ++ P+ + +L Sbjct: 174 YAHLKSPIAQK-----PVVTLQDLASHHQYIAENFSTSTLGNQQVMSPNISRISNIDVLM 228 Query: 238 ----GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM----------LLATQHSATGQ 283 G LP ++V+ +S V I + R L Sbjct: 229 RLLKNYGFALLPHHLVQAHDEKSEFVPLNIDFMANEGRAGYVLLKRGNTLSPVHQKLVTL 288 Query: 284 VTQWIKKQ 291 VT+W KQ Sbjct: 289 VTEWFDKQ 296 >UniRef50_Q1J2L5 Transcriptional regulator, LysR family n=2 Tax=Deinococci RepID=Q1J2L5_DEIGD Length = 299 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/182 (28%), Positives = 73/182 (40%), Gaps = 5/182 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E+LL F AR GS S AAEEL LT A+S+ +K + + LF R + LT Sbjct: 1 MLNPEHLLTFARVARLGSLSAAAEELYLTQPAVSHQLKLLTHAVGEPLFRRHRTGVHLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G A L + + + +G+E V R+L Q+P Sbjct: 61 AGEGLLPHAQALARALEGAQHYVQEL-RGLERGVLSVAASSTIAAALLPRVLTAFHSQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAI--GAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 V V DA+ + Q +A+ G P L G + G IAP HP Sbjct: 120 EVTFQVRQGNTREVLDALQSGQVELALIEGPPGPL--GPHLQARAFGEDELILVIAPTHP 177 Query: 182 LA 183 LA Sbjct: 178 LA 179 >UniRef50_A0KP44 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KP44_AERHH Length = 309 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 105/255 (41%), Gaps = 35/255 (13%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F + GSF++AAE L LT SA+ I R+E L V LF R+TRS LTE G F R Sbjct: 11 FASVVEAGSFAQAAERLHLTRSAVGKGIARLEQRLGVQLFHRTTRSQSLTEEGALFHRHC 70 Query: 73 TDLLNDF----YAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 L + A+ T++ ++ + + QL P LL L + P ++ Sbjct: 71 LRALEEVRLGEAALASNKLTLNGSLKVSMPVLFGQLCVAP-----LLLELAQAHPGLALS 125 Query: 129 VTTE------VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 ++ V G+ D +I N G P LD + +G AP + L Sbjct: 126 LSFSDRKVDLVEEGL-DLVIRN------GEPPDSLD---LAAHRLGEHGMTLCAAPSY-L 174 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVP-------DFNTKCQCQ 235 A EP+ + L + I + + W L GQ + P D + Q Sbjct: 175 AERGEPMMLADLAEHEGIAYLRQGRVLAWQ--WQLDGQWQSVRPTGRLQFDDLHAITQAA 232 Query: 236 ILGEGIGFLPDYMVR 250 I G G+ +LP ++ R Sbjct: 233 IAGFGLAWLPSWLAR 247 >UniRef50_B4WPG8 LysR substrate binding domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WPG8_9SYNE Length = 689 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 52/180 (28%), Positives = 90/180 (50%), Gaps = 19/180 (10%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F AR SF++AA+ L LT A+S IK +E+ L LF R R I LT G Y + + Sbjct: 9 FLEVARHLSFTEAADALNLTQPAVSAKIKSLESSLGASLFHRLGRKITLTPVGEYLVKNS 68 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRI-CINQLL--YTPKHTARLLQVLKKQFPTCQITV 129 +L+ + + ID I QG +R++I C + + PK +L ++++PT ++ Sbjct: 69 PELIQLESRLVKEIDQIKQGKSSRLKIGCTTNVANGWLPK----ILFSYRQKYPTAEVQC 124 Query: 130 -TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAI-----RWAFAIAPDHPLA 183 + + AI + A++ +G +T L G + E+ ++ ++ +A DH LA Sbjct: 125 FPFDTIQSLHQAITS--ADVDVGFSETNLQG----FDEVASLAVDNFQYLLMVAADHRLA 178 >UniRef50_B1I114 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I114_DESAP Length = 296 Score = 67.0 bits (162), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 54/188 (28%), Positives = 91/188 (48%), Gaps = 15/188 (7%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L F A+ SFS+AA+ L LT A+S I +E L R++R +ELT++G + Sbjct: 6 LETFVMVAKHKSFSRAAKTLSLTQPAVSKHISLLEAHYGTKLVNRTSRRVELTDAGIVLY 65 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH--TARLLQVLKKQFP---- 123 A ++ K I + S+ ++ R+ I + + P H R+L KK++P Sbjct: 66 HFAGRIIATMERAKEEIVSFSEEVKGRLSIGASTI---PGHYILPRILSDFKKEYPLVNV 122 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +++ T +V N + + I Q + IGAP +D I+ TE + + DHPL Sbjct: 123 SLEVSNTGKVINRLQEEAI--QVGV-IGAP---VDSPEINCTEFSSDEVVLIMPRDHPLV 176 Query: 184 FVPEPIAE 191 F E + + Sbjct: 177 FRKELVTD 184 >UniRef50_Q57748 Uncharacterized HTH-type transcriptional regulator MJ0300 n=13 Tax=Methanococcales RepID=Y300_METJA Length = 296 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 16/177 (9%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A++ SFSKAA+ LG+T +S I +E D LF R+ ++LT G+ F+ +A Sbjct: 11 FIVASKTKSFSKAAKRLGITQGTVSNHISALEKYFDAQLFLRTPEGVDLTPEGKIFYERA 70 Query: 73 T---DLLNDFYAIKRRIDTISQGIEARVRICINQLLYTP-KHT-ARLLQVLKKQFPTCQI 127 DLLN+ + R I +GI +RI + TP +H +++ K + Sbjct: 71 EKILDLLNEAKLLMRAIHENPEGI---IRIYAST---TPGEHILPSIIKEYKSSYKNVDF 124 Query: 128 TVTTEVYNGVWDAIINNQANI-AIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +T + A+ A+I A+G L +YT IG R + P+HPLA Sbjct: 125 EITITDSERCFKALDEGLADIAAVG----YLKNKNYEYTIIGKDRLVLIVPPNHPLA 177 >UniRef50_A0QTM3 HTH-type transcriptional regulator AlsR n=7 Tax=Actinomycetales RepID=A0QTM3_MYCS2 Length = 304 Score = 67.0 bits (162), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 4/134 (2%) Query: 22 FSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLNDFYA 81 F +AAE L + +S I+++E L L TR+TRS+ELT +G + R+A ++L+ A Sbjct: 18 FGRAAERLHMAQPPLSQQIRQLERELGCTLLTRTTRSVELTPAGHTYLRRAVEILDAVDA 77 Query: 82 IKRRIDTISQGIEARVRI-CINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVW-D 139 I+ GI+ R+ I C+ Y+ +L++ L + P ++TV E+ + Sbjct: 78 ANTEAQRIASGIQGRIAIGCVGSATYS--LLPQLVRALGESLPGIEVTVRGEMLAPAQIE 135 Query: 140 AIINNQANIAIGAP 153 A+++ ++A+ P Sbjct: 136 ALLSGGIDLALLRP 149 >UniRef50_Q9CNM4 HpkR n=1 Tax=Pasteurella multocida RepID=Q9CNM4_PASMU Length = 289 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 35/262 (13%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E L AF GS S AA +LG SA+S + +E L+ LF RS + LT Sbjct: 1 MYNLEQLKAFVAVCENGSISAAARKLGKAQSAVSSAVANLEIALNQTLFDRSKNAAHLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +L + +++ +S+ E R+ I L+ + T ++ L ++FP Sbjct: 61 NGAALLPMVKHVLQQIHYFEQKATALSEPQEYRLSIAFEDTLWDEQLT-KIFVKLHQRFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + I + NI I + + + +G R+ A AP HPL+ Sbjct: 120 HTQLDLQLSTAAEIRSKIEQGELNIGILYQNQV--QSDLPVQLLGQQRFVAAAAPSHPLS 177 Query: 184 FVPE--------------------PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI 223 + E PI+ ++ ++ D +N+ +GW + E + Sbjct: 178 QLTEVNNADLAHFVQLIHRNADITPISPQYWQINSYYLMMD---LVNQGIGWAIMP-EQL 233 Query: 224 LVPDFNTKCQCQILGEGIGFLP 245 LV +F LG + LP Sbjct: 234 LVDEF--------LGSQLNRLP 247 >UniRef50_A6VPW4 Transcriptional regulator, LysR family n=1 Tax=Actinobacillus succinogenes 130Z RepID=A6VPW4_ACTSZ Length = 295 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 4/134 (2%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L F GSFSKAA++L L SA+S +K +E L L R+TRS++LT G Sbjct: 5 QTLQVFAHVVESGSFSKAADQLNLHVSAVSKAVKYLENQLGSRLLNRTTRSLKLTAEGEA 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F+ KA LL + + + +SQ + ++RI + + P A+L + ++Q+P Q+ Sbjct: 65 FYEKAQFLLAELEETFQDLSGVSQQAKGKLRIEMPTAI-APFMFAKLPE-FQRQYPEIQL 122 Query: 128 TVTTEVYNGVWDAI 141 +T +GV + I Sbjct: 123 VLTAN--DGVSNLI 134 >UniRef50_D2R1A9 Transcriptional regulator, LysR family n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R1A9_9PLAN Length = 363 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 25/187 (13%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 ++L F R SFS+AA E G++ S S + ++E L V+L R+TR + LT G Sbjct: 4 KSLKIFCDIVRSRSFSRAASEHGISQSRASQIVDQLEEHLGVLLLDRTTRPLGLTPEGEV 63 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYT--PKHTARLLQVLKKQFPTC 125 ++ L+ ++ ++ ++ T+ Q + RV + +Y+ H R++Q KQ+P Sbjct: 64 YYEGCRRLVARYFVLEEQVRTLHQEVAGRVSVAS---IYSIGLSHMNRIVQNFLKQYPKA 120 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTE----IGAIRW-----AFAI 176 + + + + V + + N+Q +D G + Y + I A W Sbjct: 121 NVRLQYQHPHRVIEMVENDQ-----------VDLGLVSYPKSSRSIKATVWREEPMVLVC 169 Query: 177 APDHPLA 183 +P HPLA Sbjct: 170 SPTHPLA 176 >UniRef50_A6VR99 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A6VR99_MARMS Length = 312 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 8/242 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L F T G FS A L + S IS I +E L++VL R LTE G Sbjct: 17 KQLKVFKTVVDCGGFSAAETSLNIGRSTISLHISNLEARLNLVLCKRGRGGFSLTEEGLI 76 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICI-NQLLYTPK-HTARLLQVLKKQFPTC 125 ++ +LL A + ++ ++ + ++R+ + +++ P+ H L+Q + P Sbjct: 77 IYQMTENLLESLDAFRTTVNNLNVSLTGKLRLALSDKVSLDPRSHFPELIQRFSTEAPEV 136 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 IT + + I+N++A+I LD G+ Y + + DHPLA + Sbjct: 137 SITTNVSSMSNIERMILNDEADIGFIPYHRKLD--GLSYVHLYSDDCFLYCGKDHPLATM 194 Query: 186 PEPIAESQLRLYPNIMVEDTAH-TINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++ YP H +++++ + S ++++ + G IGFL Sbjct: 195 SVEDQDEKVDKYPATHAGLKPHEAVSEQISQMNLTAISYF---YDSRLALILSGRYIGFL 251 Query: 245 PD 246 P+ Sbjct: 252 PE 253 >UniRef50_C4IH67 Transcriptional regulator n=3 Tax=Clostridium RepID=C4IH67_CLOBU Length = 296 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 4/180 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E + F ++ FS AA EL ++ S++S IK +ET LD +LF R++R +LT Sbjct: 3 VITIEQIQYFLAVKKYNGFSPAAHELCISQSSLSKQIKSLETELDTILFDRTSRITKLTC 62 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH-TARLLQVLKKQF 122 +G F+ A L+D+ I + + I + + I + ++ A +L K ++ Sbjct: 63 AGEDFYVYALKFLDDYNKIIQGMK--KHSISKKTTLNIGTIAVISQYGLASVLASFKSKY 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 I + E V + N++ N+AI D L+ + T I + DHP Sbjct: 121 TNIDINIFEEENEAVLSMLKNSEINLAI-VRDFNLEKKLFNITHIADDELVVVTSNDHPF 179 >UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=Proteobacteria RepID=D2TI95_CITRO Length = 305 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 47/81 (58%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRI 86 +FR+ +L + A + I Sbjct: 64 ERYFRRVQSVLQEMAAAETEI 84 >UniRef50_Q7NSX8 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NSX8_CHRVO Length = 310 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 3/144 (2%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST--RSIELTESGR 66 NL F AR GSF KAA + LT A+S I+++E LD L RS LT +G Sbjct: 5 NLRYFVAVARHGSFQKAAPRIHLTQPALSKAIQQLEEELDATLLVRSRPGNPASLTPAGE 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 R+A LL++ A+ + + + + +R+ + L P+ ARLLQ + ++P Q Sbjct: 65 LVLRRAERLLSENAAMLDDLARLKRQPQGELRLGLPPLAGIPQ-VARLLQTFRARYPLVQ 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAI 150 + + +A++ +AI Sbjct: 124 LRLFERGGCEQEEAVLRGDIEVAI 147 >UniRef50_B2HVM7 Transcriptional regulator n=21 Tax=Moraxellaceae RepID=B2HVM7_ACIBC Length = 309 Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/88 (39%), Positives = 50/88 (56%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F SFS AA ELG+TTSA+S I+ +E +DV+L RSTR + LTE+G+ FF Sbjct: 11 FACVVEKSSFSGAARELGITTSAVSQQIRSLENEMDVILLHRSTRKLSLTEAGQAFFSSC 70 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRIC 100 ++L K RI+ + + +RI Sbjct: 71 QEMLAAAERGKIRINELRDDLIGDLRIA 98 >UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z947_BREBN Length = 297 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 10/180 (5%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E + AF A GSFSK A+ L L+ +S IK +ET + LF R+ +I LT+ G Sbjct: 4 EQMEAFIFVALTGSFSKTADLLYLSQPTVSMRIKALETTMGCKLFQRTGHTISLTKEGDL 63 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRIC---INQLLYTPKHTARLLQVLKKQFPT 124 F A ++++ ++ I +E + I ++ P L+Q ++ +P Sbjct: 64 FLPYAKNIMHMLQEGQQAIQRSQGDVEGELTISTVFVSAFYILPD----LVQQFQQLYPK 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++T+ T + V D ++N++ + I T I+ ++ AI PDHP F Sbjct: 120 IKLTILTGHSHQVLDMVLNHEVSFGIARAVT---HPQINRIQLMPDDMVLAIYPDHPFGF 176 >UniRef50_B7KPE2 Transcriptional regulator, LysR family n=26 Tax=Proteobacteria RepID=B7KPE2_METC4 Length = 297 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 84/276 (30%), Positives = 125/276 (45%), Gaps = 49/276 (17%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 +L+AF AR GSF+KAA +LG++ A+S T++ +E L V L R+TRS+ TE+G Sbjct: 8 DLVAFVAVARAGSFTKAAAQLGVSQPALSQTVRGLEARLGVRLLARTTRSVAPTEAGE-- 65 Query: 69 FRKATDLLNDFYAIKRRIDTISQGI----EARVRICINQLLYTPKHTAR--LLQVLKKQF 122 LLN A+ R D + +G+ E R + + +H A+ L VL++ Sbjct: 66 -----RLLN---AVGPRFDEVEEGLAGLAEMRGKAAGTVRITADEHAAQSVLWPVLRRLL 117 Query: 123 PTC-QITVTTEVYNGVWDAIINN-QANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P I V T V G+ D + A I + GG ++ A+R I PD Sbjct: 118 PDYPDIKVETVVDYGLTDIVAERIDAGIRL---------GGTLARDMTAVR----IGPDL 164 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHT-INKKV-------GWLLH--GQE-SILVPD-- 227 +A V P + R P + TAHT IN ++ W G+E + V Sbjct: 165 RMAAVAAP-SYFAARSKPERPDDLTAHTCINLRLPTHGGLYAWEFEKGGRELRVWVEGQL 223 Query: 228 -FNTKC---QCQILGEGIGFLPDYMVREAMTQSLLV 259 FNT + + G GI +LP+ VR + LV Sbjct: 224 VFNTITLILEAALDGFGIAYLPEDGVRAHLAAGTLV 259 >UniRef50_A3D4V0 Putative uncharacterized protein n=1 Tax=Shewanella baltica OS155 RepID=A3D4V0_SHEB5 Length = 302 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 35/69 (50%), Positives = 45/69 (65%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AFT AR GS + AAEEL LT SAIS+ I+ +E LDVVLF R R + LT++GR + Sbjct: 11 LRAFTALARLGSINAAAEELSLTQSAISHQIRSIEDYLDVVLFNRDGRKMTLTDAGRVYA 70 Query: 70 RKATDLLND 78 + L+D Sbjct: 71 YQIRQALDD 79 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 56/187 (29%), Positives = 84/187 (44%), Gaps = 19/187 (10%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F +L AF GSF KAAE + ++ A+S I ++E L V LF R+TRS+ LT Sbjct: 5 FDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVTLTTV 64 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRI-CINQLLY--TPKHTARLLQVLKKQ 121 GR F A LL+D I +S V I C+ + Y P A ++ Sbjct: 65 GRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSVAYYFLPGAVAS----YHRR 120 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIG-----APDTLLDGGGIDYTEIGAIRWAFAI 176 FP ++ + N V A+I+ +A+ + PD +++ + R+ A Sbjct: 121 FPRIRVKILDSSANDVLAAVISGEADFGVSFMGSQEPD-------VEFKMLLQERFVAAC 173 Query: 177 APDHPLA 183 DHPLA Sbjct: 174 RRDHPLA 180 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 17/182 (9%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F A +F++AAE+L L+ A+S + +ET V LF R R IELT SG+ Sbjct: 4 EQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNSGQL 63 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLL---YTPKHTARLLQVLKKQFPT 124 +A ++ + I+ ++ + I +Q + + P LQ ++Q+P Sbjct: 64 LLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTVASWWLPPQ----LQRFRQQYPK 119 Query: 125 CQITV----TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q+ V T E+ G W A + IG + + + + IG + AF + H Sbjct: 120 VQLKVVSGNTEEI--GEWVA----AGQVDIGLVEREVRNKSLTFNAIGGDKMAFVVGKQH 173 Query: 181 PL 182 PL Sbjct: 174 PL 175 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77700 Uncharacterized HTH-type transcriptional regulat... 429 e-119 UniRef50_UPI000197C658 DNA-binding transcriptional activator All... 297 3e-79 UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax... 288 1e-76 UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=... 287 3e-76 UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 284 3e-75 UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=M... 283 5e-75 UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hon... 281 2e-74 UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulat... 278 2e-73 UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=D... 277 4e-73 UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacteriu... 277 5e-73 UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=... 275 1e-72 UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=M... 274 2e-72 UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=P... 274 3e-72 UniRef50_Q2TTU9 Transcriptional regulator n=17 Tax=Escherichia R... 265 1e-69 UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=... 264 3e-69 UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=... 263 5e-69 UniRef50_A4BES5 Transcriptional regulator, LysR family protein n... 261 2e-68 UniRef50_Q7NS01 Probable transcriptional regulator, LysR family ... 260 4e-68 UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=g... 258 2e-67 UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n... 258 2e-67 UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bo... 258 2e-67 UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=... 258 2e-67 UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of ... 258 2e-67 UniRef50_P76369 Uncharacterized HTH-type transcriptional regulat... 257 3e-67 UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=L... 255 1e-66 UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=V... 255 1e-66 UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=C... 254 2e-66 UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=... 254 3e-66 UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n... 253 7e-66 UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=P... 252 1e-65 UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=A... 249 7e-65 UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=B... 249 8e-65 UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ... 247 4e-64 UniRef50_P67661 Uncharacterized HTH-type transcriptional regulat... 245 1e-63 UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=R... 245 2e-63 UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteri... 245 2e-63 UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales ... 244 3e-63 UniRef50_D0WIW9 HTH-type transcriptional activator AllS n=1 Tax=... 243 6e-63 UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=B... 242 1e-62 UniRef50_A8GHI5 Transcriptional regulator, LysR family n=4 Tax=E... 240 4e-62 UniRef50_A6GPV4 Probable transcriptional regulator transcription... 239 1e-61 UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=... 237 3e-61 UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=... 236 9e-61 UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding... 235 2e-60 UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=M... 235 2e-60 UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=M... 234 3e-60 UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=P... 233 4e-60 UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gamm... 233 5e-60 UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2... 233 6e-60 UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=g... 232 2e-59 UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=P... 231 2e-59 UniRef50_Q316J6 Transcriptional regulator, LysR family n=1 Tax=D... 230 6e-59 UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lenti... 229 7e-59 UniRef50_D0X470 Transcriptional activator of LysR family n=1 Tax... 229 8e-59 UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=D... 229 9e-59 UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=... 229 9e-59 UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=P... 228 2e-58 UniRef50_B7VQ88 Hypothetical transcriptional regulator n=7 Tax=G... 228 2e-58 UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobac... 228 2e-58 UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1... 228 2e-58 UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=G... 226 6e-58 UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=D... 226 7e-58 UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=... 226 8e-58 UniRef50_A4A494 Transcriptional regulator, LysR family protein n... 226 9e-58 UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=P... 225 1e-57 UniRef50_C8Q1Z8 Transcriptional regulator, LysR family n=1 Tax=P... 225 2e-57 UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria... 225 2e-57 UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=V... 224 3e-57 UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=... 223 4e-57 UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=... 223 5e-57 UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=O... 223 6e-57 UniRef50_Q2S7W3 Transcriptional regulator n=1 Tax=Hahella chejue... 223 8e-57 UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=S... 222 1e-56 UniRef50_B7KW28 Transcriptional regulator, LysR family n=6 Tax=c... 222 2e-56 UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=L... 221 2e-56 UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=... 221 2e-56 UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=P... 221 2e-56 UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=M... 221 3e-56 UniRef50_C5BEG7 Transcriptional regulator, LysR family protein n... 220 3e-56 UniRef50_Q1D4Y5 Transcriptional regulator, LysR family n=1 Tax=M... 220 6e-56 UniRef50_Q7ME88 Transcriptional regulator n=60 Tax=Vibrionales R... 218 2e-55 UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=A... 218 2e-55 UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=P... 218 3e-55 UniRef50_A6VRP1 Transcriptional regulator, LysR family n=1 Tax=M... 217 3e-55 UniRef50_Q161W6 Transcriptional regulator, LysR family n=1 Tax=R... 217 3e-55 UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejue... 217 5e-55 UniRef50_A8H1M6 Transcriptional regulator, LysR family n=6 Tax=G... 217 5e-55 UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=R... 217 5e-55 UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n... 217 5e-55 UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=B... 215 1e-54 UniRef50_A9D356 Transcriptional regulator, LysR family protein n... 215 2e-54 UniRef50_B6R8I7 Transcriptional regulator, LysR family n=1 Tax=P... 215 2e-54 UniRef50_A8FU64 Transcriptional regulator, LysR family n=1 Tax=S... 214 4e-54 UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=D... 213 6e-54 UniRef50_A6FA48 Putative transcriptional regulator with periplas... 213 6e-54 UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Ph... 212 1e-53 UniRef50_Q39M30 Transcriptional regulator, LysR family n=3 Tax=P... 212 2e-53 UniRef50_A3Y6H6 Transcriptional regulator, LysR family protein n... 211 3e-53 UniRef50_Q5R026 Transcriptional regulator, LysR family n=2 Tax=I... 210 3e-53 UniRef50_B8IXI4 Transcriptional regulator, LysR family n=1 Tax=M... 210 5e-53 UniRef50_C4LEH9 Transcriptional regulator, LysR family n=1 Tax=T... 208 1e-52 UniRef50_B6R986 Transcriptional regulator, LysR family, putative... 208 1e-52 UniRef50_A0XZG1 Putative transcriptional regulator with periplas... 208 2e-52 UniRef50_D0HD71 Transcriptional regulator LysR family n=5 Tax=Vi... 208 3e-52 UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n... 207 3e-52 UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Ba... 207 4e-52 UniRef50_C3JZ35 Putative LysR-family transcriptional regulatory ... 207 5e-52 UniRef50_Q12M83 Transcriptional regulator, LysR family n=21 Tax=... 207 6e-52 UniRef50_Q15RK7 Transcriptional regulator, LysR family n=1 Tax=P... 205 1e-51 UniRef50_B4SLV6 Transcriptional regulator, LysR family n=3 Tax=S... 205 2e-51 UniRef50_A8FSN0 Transcriptional regulator, LysR family n=2 Tax=G... 205 2e-51 UniRef50_B1KLA1 Transcriptional regulator, LysR family n=14 Tax=... 205 2e-51 UniRef50_C1DLB3 LysR family transcriptional regulator protein n=... 204 3e-51 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 203 5e-51 UniRef50_B8CKK6 Regulatory protein, LysR:LysR, substrate-binding... 203 6e-51 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 203 8e-51 UniRef50_A6B821 Transcription regulator, LysR family n=2 Tax=Vib... 203 8e-51 UniRef50_B5WQC5 Transcriptional regulator, LysR family n=1 Tax=B... 203 9e-51 UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=P... 201 2e-50 UniRef50_Q0B6H7 Transcriptional regulator, LysR family n=15 Tax=... 201 2e-50 UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia inte... 201 2e-50 UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdema... 201 2e-50 UniRef50_Q2T002 Transcriptional regulator, LysR family n=103 Tax... 201 3e-50 UniRef50_B9ZS82 Transcriptional regulator, LysR family n=1 Tax=T... 201 3e-50 UniRef50_Q7NWQ9 Probable transcriptional regulator, LysR family ... 201 3e-50 UniRef50_C1DBU0 Probable transcriptional regulator, LysR family ... 200 5e-50 UniRef50_B6EJX0 HTH-type transcription regulator, LysR family n=... 199 1e-49 UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=P... 198 2e-49 UniRef50_B8CUJ1 Transcriptional Regulator, LysR family n=1 Tax=S... 198 2e-49 UniRef50_A1S9J5 Transcriptional regulator, LysR family n=1 Tax=S... 198 2e-49 UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=... 198 2e-49 UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=C... 197 3e-49 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 197 4e-49 UniRef50_C9XSU0 LysR-family transcriptional regulator n=4 Tax=Cl... 197 4e-49 UniRef50_A5W2P1 Transcriptional regulator, LysR family n=8 Tax=G... 197 5e-49 UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus ... 196 7e-49 UniRef50_A8ZMF1 Transcriptional regulator, LysR family n=1 Tax=A... 195 2e-48 UniRef50_B7H1A2 Bacterial regulatory helix-turn-helix protein, l... 195 2e-48 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 195 2e-48 UniRef50_A3QAQ4 Transcriptional regulator, LysR family n=1 Tax=S... 195 2e-48 UniRef50_Q6MPF8 Transcriptional regulator, LysR family n=1 Tax=B... 194 3e-48 UniRef50_A6FDC7 Putative transcriptional regulator with periplas... 193 5e-48 UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=C... 193 5e-48 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 193 5e-48 UniRef50_C6D9I6 Transcriptional regulator, LysR family n=3 Tax=G... 193 6e-48 UniRef50_B2I2G0 Transcriptional regulator n=17 Tax=Acinetobacter... 193 6e-48 UniRef50_A5EG89 Transcriptional regulator, LysR family n=5 Tax=R... 193 7e-48 UniRef50_A6VZK8 Transcriptional regulator, LysR family n=1 Tax=M... 193 7e-48 UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marin... 193 7e-48 UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=V... 193 8e-48 UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=M... 193 9e-48 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 193 9e-48 UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=g... 193 9e-48 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 192 1e-47 UniRef50_Q6DB33 LysR-family transcriptional regulator n=2 Tax=Pe... 192 1e-47 UniRef50_A4SRE3 Transcriptional regulator, LysR family n=3 Tax=G... 192 1e-47 UniRef50_A1JP38 LysR family transcription regulatory protein n=4... 192 1e-47 UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=P... 192 2e-47 UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=G... 192 2e-47 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 191 2e-47 UniRef50_A3RXY4 Transcriptional regulators, LysR family n=5 Tax=... 191 2e-47 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 191 3e-47 UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydr... 191 3e-47 UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n... 190 4e-47 UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=P... 190 5e-47 UniRef50_Q1ZUA4 Transcriptional regulator, LysR family protein n... 190 6e-47 UniRef50_Q65QK1 LysR protein n=1 Tax=Mannheimia succiniciproduce... 190 6e-47 UniRef50_D2RJU1 Transcriptional regulator, LysR family n=1 Tax=A... 189 9e-47 UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=M... 189 9e-47 UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=ma... 189 1e-46 UniRef50_B1I630 Transcriptional regulator, LysR family n=1 Tax=C... 188 2e-46 UniRef50_A6U726 Transcriptional regulator, LysR family n=5 Tax=P... 188 3e-46 UniRef50_A9ACH3 Transcriptional regulator, LysR family n=16 Tax=... 188 3e-46 UniRef50_A6CV53 Transcriptional regulator, LysR family protein n... 187 4e-46 UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=... 187 4e-46 UniRef50_UPI000197C884 LysR family transcriptional regulator n=1... 187 4e-46 UniRef50_C6B409 Transcriptional regulator, LysR family n=8 Tax=R... 187 5e-46 UniRef50_Q48GP5 Transcriptional regulator, LysR family n=38 Tax=... 186 6e-46 UniRef50_A6CVI9 Transcriptional regulator, LysR-family protein n... 186 7e-46 UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=C... 186 7e-46 UniRef50_A6CXR5 LysR, substrate-binding protein n=1 Tax=Vibrio s... 186 8e-46 UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=... 186 9e-46 UniRef50_A0KNZ5 Transcriptional regulators, LysR family n=2 Tax=... 186 9e-46 UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=C... 186 1e-45 UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=V... 186 1e-45 UniRef50_A1TIL9 Transcriptional regulator, LysR family n=15 Tax=... 186 1e-45 UniRef50_Q4K6W0 Transcriptional regulator, LysR family n=14 Tax=... 186 1e-45 UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=P... 185 1e-45 UniRef50_Q9CNM4 HpkR n=1 Tax=Pasteurella multocida RepID=Q9CNM4_... 185 1e-45 Sequences not found previously or not previously below threshold: UniRef50_C6D9Q6 Transcriptional regulator, LysR family n=9 Tax=E... 209 1e-52 UniRef50_Q88D98 Transcriptional regulator, LysR family n=15 Tax=... 208 2e-52 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 208 3e-52 UniRef50_Q082Z0 Transcriptional regulator, LysR family protein n... 207 3e-52 UniRef50_B0TSK1 Transcriptional regulator, LysR family n=14 Tax=... 205 2e-51 UniRef50_Q12N18 Transcriptional regulator, LysR family n=22 Tax=... 205 2e-51 UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronoba... 201 3e-50 UniRef50_C7JFW5 Transcriptional regulator LysR n=8 Tax=Acetobact... 200 4e-50 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 200 5e-50 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 199 1e-49 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 198 2e-49 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 198 2e-49 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 197 5e-49 UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=... 197 5e-49 UniRef50_Q47Y42 Transcriptional regulator, LysR family n=2 Tax=A... 196 7e-49 UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethi... 196 8e-49 UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=... 196 1e-48 UniRef50_Q2BQ19 Transcriptional regulator, LysR family protein n... 195 2e-48 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 194 4e-48 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 193 7e-48 UniRef50_B4SME3 Transcriptional regulator, LysR family n=23 Tax=... 193 7e-48 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 193 7e-48 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 193 9e-48 UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=... 192 1e-47 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 192 2e-47 UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Ba... 192 2e-47 UniRef50_C9P545 Putative transcriptional regulator n=2 Tax=Vibri... 190 5e-47 UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=S... 190 5e-47 UniRef50_A6D3V1 Transcriptional regulator, LysR family protein n... 190 6e-47 UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=C... 190 7e-47 UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=... 190 8e-47 UniRef50_Q13L83 Transcriptional regulator, LysR family n=7 Tax=P... 189 1e-46 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 189 1e-46 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 189 1e-46 UniRef50_Q1QY93 Transcriptional regulator, LysR family n=1 Tax=C... 189 1e-46 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 189 1e-46 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 188 2e-46 UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n... 188 2e-46 UniRef50_A8G163 Carbonate dehydratase n=14 Tax=Gammaproteobacter... 188 2e-46 UniRef50_C9QE28 Transcriptional regulator n=3 Tax=Vibrionaceae R... 188 2e-46 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 188 3e-46 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 187 4e-46 UniRef50_Q142A3 Transcriptional regulator, LysR family n=53 Tax=... 187 4e-46 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 187 4e-46 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 187 4e-46 UniRef50_C8SVH4 Transcriptional regulator, LysR family n=1 Tax=M... 187 4e-46 UniRef50_Q2SCX5 Transcriptional regulator n=1 Tax=Hahella chejue... 187 4e-46 UniRef50_B4EWF9 LysR-family transcriptional regulator n=16 Tax=P... 187 5e-46 UniRef50_Q5FP23 Transcriptional regulator n=1 Tax=Gluconobacter ... 187 5e-46 UniRef50_A3N6S5 Transcriptional regulator, LysR family n=37 Tax=... 186 5e-46 UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Pr... 186 5e-46 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 186 6e-46 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 186 6e-46 UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=... 186 7e-46 UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=B... 186 1e-45 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 186 1e-45 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 186 1e-45 UniRef50_A1AYK1 Transcriptional regulator, LysR family n=1 Tax=P... 186 1e-45 UniRef50_Q4KCL2 Transcriptional regulator, LysR family n=1 Tax=P... 185 1e-45 UniRef50_A4XVX3 Transcriptional regulator, LysR family n=8 Tax=P... 185 1e-45 >UniRef50_P77700 Uncharacterized HTH-type transcriptional regulator yahB n=52 Tax=Bacteria RepID=YAHB_ECOLI Length = 310 Score = 429 bits (1103), Expect = e-119, Method: Composition-based stats. Identities = 310/310 (100%), Positives = 310/310 (100%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE Sbjct: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK Sbjct: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH Sbjct: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG Sbjct: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG Sbjct: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 Query: 301 IYQDLLHREN 310 IYQDLLHREN Sbjct: 301 IYQDLLHREN 310 >UniRef50_UPI000197C658 DNA-binding transcriptional activator AllS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C658 Length = 308 Score = 297 bits (762), Expect = 3e-79, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 172/303 (56%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +E + F T A+ SFS+AA++L +T+ ISY IK +E + V LFTR+TR++ LT Sbjct: 1 MLDQETMTTFITVAQCQSFSQAAKQLYKSTATISYRIKILEEYVGVQLFTRTTRTVNLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G Y + N + ++ I++G+E + I IN LLY P A LLQ L ++FP Sbjct: 61 AGEYLLEHCREWHNWLSNMPNQLRLINEGVEQEITIAINNLLYEPNAVADLLQHLTERFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ +T +VY GVWDA+++N+ +IAIG P + ++ +G I W FA+A HPLA Sbjct: 121 FTRLNITRQVYMGVWDALLSNKCDIAIGVPGSESLDSDMNTLFLGKIDWVFAVANQHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + +++ QLR YP I VEDT+ ++K+ WLL GQ I VPD TK C + G GIGF Sbjct: 181 SIDGILSDEQLRCYPTINVEDTSQVLSKRTAWLLSGQREIKVPDMKTKVLCHLKGTGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP + + + L+ + I PR+ S + LA + G+V + + K F + Sbjct: 241 LPASICKPYIQNQQLIEKSIKRPRRPSPLSLAWNSNQQGEVLKTVVKLFKLRDPIIQSLL 300 Query: 304 DLL 306 + Sbjct: 301 SPI 303 >UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax=Enterobacteriaceae RepID=ALLS_ECOK1 Length = 308 Score = 288 bits (738), Expect = 1e-76, Method: Composition-based stats. Identities = 110/283 (38%), Positives = 163/283 (57%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F E L F A GSFSKAAE L TT+ ISY IK +E V LF R+TRS+ LT Sbjct: 1 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + +A D L ++ + ++ G+E +V I IN LLY P+ ARLL L +++P Sbjct: 61 AGEHLLCQARDWLGWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVARLLAWLNERYP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q ++ ++Y GVWD+++ ++AIG T +G+++W F +A DHPLA Sbjct: 121 FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 V EP+ E+QLR +P + +ED+A T+ K+V W L GQ+ I+VPD TK + G GIGF Sbjct: 181 NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQ 286 LP + + + LV+R I R S + LA + +G+ + Sbjct: 241 LPKSLCQSMLDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVE 283 >UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=Gammaproteobacteria RepID=A8GDV5_SERP5 Length = 314 Score = 287 bits (735), Expect = 3e-76, Method: Composition-based stats. Identities = 90/297 (30%), Positives = 159/297 (53%), Gaps = 1/297 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLDVVDAVARTGSFSAAAHELHRVPSAVSYTVRQLEQWLAVPLFERRHRDVELTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F ++A ++ +R+ ++ G +++I ++ ++ P+ +L+ + FP Sbjct: 61 AGVVFVQEARSVIKKMLDTRRQCQQVANGWRGQLKIAVD-IIVKPQRCRQLVLDFYRHFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+++ +A++AIGA + GGG + ++G +RW ++P HPLA Sbjct: 120 DVELMVQPEVFNGVWDALVDGRADMAIGATRAVPVGGGFAFRDMGDMRWLCVVSPQHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + QLR +P++ +EDT+ + K+V W L Q ++VPD+ + C G +G Sbjct: 180 MMDGLLNDEQLRPFPSLCLEDTSRNLPKRVTWTLDNQRRLVVPDWASALDCLCAGLCVGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 +P + + + LV Q+ P S L Q + W+ + L Sbjct: 240 MPAHQALPLVQRGELVALQLQQPFPASPCCLTWQQNTPSPAMAWLLDYLGDSETLNQ 296 >UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5U3_LARHH Length = 317 Score = 284 bits (726), Expect = 3e-75, Method: Composition-based stats. Identities = 99/306 (32%), Positives = 151/306 (49%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 E L F AR GSFS AAE L T +AISY I+ +E + LF R+TRS+ LT Sbjct: 7 RRLDPEALKTFMEVARQGSFSAAAERLNKTPAAISYRIRALEDNMGTPLFERTTRSVTLT 66 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G + T + + + ++ G+E R + IN LL+ + RLL L + F Sbjct: 67 PAGELLLERGTQIFEWMQHLPEELQQVNDGVEPRFHLVINNLLFNAEAVGRLLATLSRSF 126 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 V VY GVWD ++ + AIG P + +G I W ++P HPL Sbjct: 127 SHTAFRVRRAVYMGVWDEMVYGSGHFAIGIPGWHPISDAFETLPLGQIEWVLVMSPAHPL 186 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + +P+ LR YP + VEDT+ ++K+ WLL GQ +LVP K + G G+G Sbjct: 187 AGIQQPLTNDLLRQYPAVNVEDTSERLSKRTAWLLPGQHEVLVPSLRAKIAAHVHGLGVG 246 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 FLP + + + LV +Q+ + R S M LA + +G++ +++ FA L + Sbjct: 247 FLPRSIAEQYVRTRQLVIKQVRHGRTPSPMALAWRREDSGRIGAYLQALFAAEDPLVSPF 306 Query: 303 QDLLHR 308 + + R Sbjct: 307 LNKIQR 312 >UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUP2_METML Length = 304 Score = 283 bits (725), Expect = 5e-75, Method: Composition-based stats. Identities = 88/292 (30%), Positives = 157/292 (53%), Gaps = 2/292 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ + E+L AR GSF+ AAE L SAI+YT++++E L+V LF RS E Sbjct: 1 MSTKLSLESLEVLDAIARKGSFAAAAESLFRVPSAITYTVRKLEEDLNVQLFNRSGHRAE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G ++ +LLN ++ R+ +++G+E + I +N L + +L Sbjct: 61 LTLAGAELLKEGRNLLNAANELESRVKRVAKGVETELTIAVNDL-FDITRIYPILDKFYN 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q +I +T EV+ G WDA+I+ +A+I +G P G IG + +++A+AP H Sbjct: 120 QNFGTRIKLTQEVFGGGWDALISGRADITLGCPGDTPPVSGFTTKPIGLVEFSYAVAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + +P+ + + + I D++ + + +L GQ+ + +P+ + K Q Q+ G G Sbjct: 180 PLAKIADPLQDEDIIRHRAISSADSSRNLPPRTAGILSGQDVLTLPNMHFKLQAQLAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G++P + ++ L+ +Q+ P+ + LLA + + G+ QW KQF Sbjct: 240 AGYMPTKIAEHYASKGQLIIKQVAKPKHEVMGLLAWR-NDGGKAQQWFIKQF 290 >UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D757_LARHH Length = 303 Score = 281 bits (720), Expect = 2e-74, Method: Composition-based stats. Identities = 109/293 (37%), Positives = 161/293 (54%), Gaps = 1/293 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 I E L T AR+ SFS AAE L SAISYT++++E + LF R + +ELT Sbjct: 2 IIQTEALRVVETVARYRSFSAAAERLHKVPSAISYTVRKLEETIGTQLFLREGKQVELTA 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GRYF A D+L D ++ I + G+E + R+ +N LL P A L L ++F Sbjct: 62 EGRYFLEHARDILRDLETLQADITQLHGGVEQQFRVGLNNLL-NPAPLAGLAADLHQRFT 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 C+ + TEVYNGVWDA+I+ + ++AIGAP+ L G + Y +G + W F I+P HPLA Sbjct: 121 ACRQSYRTEVYNGVWDALIDRRIDLAIGAPNVLPQGADLSYLPMGEVHWDFVISPQHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P+ +L +P I V DTA ++KK WL+ GQ+ I PD K Q I G GIGF Sbjct: 181 RSHSPLDSRELAAFPAISVMDTAMGLSKKEAWLVKGQKVIYAPDTAAKLQFLIAGVGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 +P ++ A+ + L+ R + +P+ + ++ A Q G+V + + Sbjct: 241 MPRHLCAYAVRKGQLLQRPVVDPKPPTPIMAAWQTRNQGKVLAYAISRLEDPD 293 >UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulator ydhB n=131 Tax=Proteobacteria RepID=YDHB_ECO57 Length = 310 Score = 278 bits (711), Expect = 2e-73, Method: Composition-based stats. Identities = 86/290 (29%), Positives = 158/290 (54%), Gaps = 1/290 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA+EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +F ++ ++ +++ I+ G ++ I ++ ++ P+ T +++ + F Sbjct: 61 AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV-RPERTRQMIVDFYRHFD 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+ + + +AIGA + GG + ++G + W+ +A HPLA Sbjct: 120 DVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + P ++ LR +P+++ EDT+ T+ K++ WLL Q+ ++VPD+ + C G IG Sbjct: 180 LMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 +P + + + + V ++ NP DS L Q + W+ + Sbjct: 240 VPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLG 289 >UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IM2_DECAR Length = 303 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 90/302 (29%), Positives = 144/302 (47%), Gaps = 2/302 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + + LL R GSF+ AA L SA+S+ I ++E L LF R R L E+ Sbjct: 3 ISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G LL ++RR+ I+QG EA +RI I+ ++ + +L+ + Sbjct: 63 GHTLLEDGRHLLRSASELERRVQRIAQGWEAELRIAIDTIIPVER-IYPMLERFYAAGHS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGA-IRWAFAIAPDHPLA 183 Q+ ++ EV G WDA+ ++A++ IGA + GI + ++ FAIAP HPLA Sbjct: 122 TQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIATRLLCRHSQFVFAIAPSHPLA 181 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 EPI S+L + I + DT+ + + L+ GQ+ + VPD K Q+ G GIG Sbjct: 182 AWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIGH 241 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP ++ + LV + + +PR + LA + +G+ W A + + Q Sbjct: 242 LPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQ 301 Query: 304 DL 305 L Sbjct: 302 GL 303 >UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z3S8_PHOPR Length = 300 Score = 277 bits (708), Expect = 5e-73, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 1/297 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++++L A GSF+ AAE L SA+SYT+K+ME L LF R+ R ++LT Sbjct: 2 PLSKKSLKTIHVIAHSGSFAVAAERLNRVPSAVSYTVKKMEEELGFSLFDRTGRQVKLTP 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+YF ++ +L+ + + R IS G++ I IN ++ L+ L +QFP Sbjct: 62 AGKYFIDQSQWMLDSYEELVRNTAMISSGVDVSFSIAINNIINREDLIP-LIGKLNQQFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + QI+V TEVYNG WDA+ +A++ IGAP + GI Y IG I W F +A HPLA Sbjct: 121 STQISVKTEVYNGCWDALYGRRADLVIGAPHSAPKMEGIVYHSIGNIDWDFIVAQTHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + +LR YP I+V+DT+ I+ + W L GQ+ I P+ T + G GIG+ Sbjct: 181 SQVSALTAEELRYYPVIVVKDTSQHISPQDTWSLTGQKIIYAPELTTAIKMIEHGIGIGY 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P + ++ + Q ++ + I +Q +++ A + V W + + + Sbjct: 241 APHHRIKGKLDQGTILKKAIIEHKQPTQLFYAWHANRESPVLNWCIEYLMSSENHSQ 297 >UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=Gammaproteobacteria RepID=A0KUI9_SHESA Length = 320 Score = 275 bits (705), Expect = 1e-72, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 2/292 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + + L+ + GSFS AAE L SA++YT++++E+ L V LF R + E Sbjct: 24 MLPVMSLDGLIVLDAIDKKGSFSAAAESLFRVPSALTYTVQKLESDLGVKLFERKGQRAE 83 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G+ R+ ++L ++ + + G E+ + + I+ ++ +L+ + Sbjct: 84 LTLVGQLVLRQGREILAATARLEEAVRQLETGWESALTLAIDTVVPDLPLL-KLIAEFTE 142 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 I +T E G WDA+ + +A+IAIG L G EIG + + FA+AP H Sbjct: 143 LGKQVTINITEESLGGGWDALYSGRADIAIGVTGELPKGQ-YHLVEIGMLEFVFALAPHH 201 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA PI L +P+++V D++ + ++ L ++ I VP+ TK + Q LG G Sbjct: 202 PLAQFDHPIPTEALLQFPSVVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLG 261 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +G+LP +++RE + LV ++ PR + LA + G+ W ++ Sbjct: 262 VGYLPKHLIREELASGALVACKVEIPRPAQPVFLAWRKGNQGKAQAWFAERL 313 >UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=Marinobacter RepID=A1TYX9_MARAV Length = 306 Score = 274 bits (702), Expect = 2e-72, Method: Composition-based stats. Identities = 89/300 (29%), Positives = 141/300 (47%), Gaps = 1/300 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + L R GSF+ AA EL SAISYT++++E L+V +F R+ Sbjct: 1 MHTAITIDALKVLDAIDRKGSFAGAAGELFRVPSAISYTVQKLEEDLNVSIFDRTGHKAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GRY + LL + ++QG E R+RI N LL + + Sbjct: 61 LTPAGRYLLEEGRSLLEAAENLAHTTRQVAQGWETRLRIGFNSLLPAQCLFPAIDAFYQL 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P + V EV+ G WDA+ + + ++ IGA G +G I + FA+A H Sbjct: 121 GVP-VDVQVVEEVFAGAWDALQSRRVDMVIGADQLSKPAGSFTTKPLGEIPFVFAVAASH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA EP+ ES + +P + DT+ + + Q ++ V + + K Q G G Sbjct: 180 PLAQAEEPLTESDIAPFPAAVAADTSRALPPGHAGIFRRQRTLTVTNIDQKIAIQEAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 +G+LP +REA+ LVT+ +H PR + LA G+ W + + + L+ Sbjct: 240 VGWLPLPRIREALAAGRLVTKAVHEPRPPIAIHLARHSEDKGKALMWFWNRLSEDQSLSQ 299 >UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1H085_METFK Length = 300 Score = 274 bits (701), Expect = 3e-72, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 3/297 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + E L R GSFS AAE L SAI+YTI+ +E LD+ LF RS + Sbjct: 1 MSIRLSIEALEVLDAIDREGSFSAAAESLHRVPSAITYTIRTLEDDLDIKLFDRSGHKAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G R+ LL ++RR+ ++ GIE +RI I+ LL +L + Sbjct: 61 LTAAGLELLREGRHLLKAAGELERRVRRVATGIETDIRIAISDLLRLEP-LYDILDRFYR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q ++ + EVY G WDA+I+N+A+I+IGAP GGG +G + + FAIAP H Sbjct: 120 QAFGTRVYLQREVYGGSWDALISNRADISIGAPGEGPSGGGYTTRLLGTLEFVFAIAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA +PEP++ ++ + +I D++ + K +L GQ+ + VPD +K QI G G Sbjct: 180 PLADLPEPLSNHDIQQHRSISAADSSRHLPPKTSGILDGQDVLSVPDIPSKALAQIKGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 +G+LP + + L+ R++ P+ + +A + G+ QW+ ++ G+ Sbjct: 240 VGYLPRKLAEYHAARGELLIREVAEPKPEVVAYVAWRSG--GKAQQWLLQELQKVGM 294 >UniRef50_Q2TTU9 Transcriptional regulator n=17 Tax=Escherichia RepID=Q2TTU9_ECOLX Length = 296 Score = 265 bits (678), Expect = 1e-69, Method: Composition-based stats. Identities = 92/295 (31%), Positives = 146/295 (49%), Gaps = 1/295 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++E + AR + + AAE+L S ISYT+K+ E L V LF R R IEL+ + Sbjct: 3 ISDETIRIIHLVARHQNITTAAEQLNKVPSTISYTLKKAEETLGVELFIRKGRYIELSPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G YF + ++L D A+KR I GIE + I +N ++ +Q ++QF + Sbjct: 63 GSYFIEHSKNILRDLDALKRNTVLIHDGIERELTIAVNNIIPG-DFLVSFIQDFERQFTS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +TV EVYNG WDA+ + +A++ GAP + GI +G I W F ++P HPLA Sbjct: 122 TTLTVDIEVYNGCWDALYSKRADLVYGAPHAVPSSEGIISEPVGQIEWDFVVSPLHPLAV 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P+ S+LR YP + + DT+ WLL GQ+ I VPDF GIG++ Sbjct: 182 KRNPLENSELRHYPAVCIRDTSVNFPPMQAWLLEGQKPIFVPDFAMAISLIEQNVGIGYI 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILT 299 P ++ + + L+ + + + +++ LA + G+ W + Sbjct: 242 PHHLALPLLNRGKLLKKPMREHKHATKLFLAARSDGIGKACLWCMSYLRNKQFMA 296 >UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=Burkholderiales RepID=Q1LK69_RALME Length = 342 Score = 264 bits (675), Expect = 3e-69, Method: Composition-based stats. Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 1/303 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 +N + E+L R GSF+ AA E+G SA++Y ++++E LDV+LF R E Sbjct: 30 LNMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDRRRHRAE 89 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + LL ++RRI ++ G EA + I ++ L+ + ++Q Sbjct: 90 LTPAGRALLDEGRHLLRAADDLERRIKRLATGWEASLNITVDDLVNF-RALLPVIQDFYA 148 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + ++ + EV G WDA+++N+A++ IG G +GA+ + FA+A H Sbjct: 149 ENTATRLRFSKEVLGGAWDALVSNRADLIIGGAYEAPSTQGFQVRALGAMPFVFAVAAHH 208 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA V P+ ++ + + V DT+ + + +L GQ+ ++VP K + QI G G Sbjct: 209 PLAAVEGPLTTIEIAKHRIVAVGDTSRNLPARTHGVLAGQDVLVVPTMRDKLEAQIRGLG 268 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 G+LP + + + +L R+ R +A + + G+ QW + + Sbjct: 269 CGWLPAPLAQPHIESGVLQARETVEVRAPGNFKVAWRTNTRGKALQWWTNKLEDPRLAQA 328 Query: 301 IYQ 303 + Sbjct: 329 LLL 331 >UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=B5Y100_KLEP3 Length = 300 Score = 263 bits (673), Expect = 5e-69, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 1/298 (0%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + L+ R GSF+ AAE L T +A+SY I+++E+ LD+VL RS + T++G Sbjct: 4 NFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLDIVLLDRSGHRAKFTDTG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R K LL+ ++++ +S G E + I ++ L+ Q P Sbjct: 64 RLMLEKGRQLLSAARDLEKQAQQLSAGWERELAIALDASFPFSALLP-LIAEFYAQNPQT 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + G W+ + ++ A+I +GA + + +GA+ F +AP HPLA Sbjct: 123 RLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAPAHPLAQA 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 EP+ QL + I++ D+A + LL Q I V DF +K + G G GFLP Sbjct: 183 KEPLTNKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGFLP 242 Query: 246 DYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 ++ R + + L+ + + R+ +A + G +W ++ +L+ +Y+ Sbjct: 243 RHIARPWLEKGSLMEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYR 300 >UniRef50_A4BES5 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BES5_9GAMM Length = 307 Score = 261 bits (668), Expect = 2e-68, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 ++ T + L A + GSF+ AA+ L SA++YTI+++E L++ LF RS +L Sbjct: 13 HNPITLDLLRALDAIDKRGSFAAAAQALHKVPSALTYTIQKVEQDLNLELFDRSGHRAKL 72 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T G+ + +L D + + ++ G E + +C++ L + L++ +Q Sbjct: 73 TPPGKLLLDQGRLILRDIDGLAQSAQKVASGWEPELTLCVDHL-FDVACLFPLVREFNRQ 131 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P +I + +G W+ ++N A++ + +T G D +G FA+A DHP Sbjct: 132 YPFVRINLRQGSLSGSWEQLLNGSADLLLAPANTNPKIDGYDKKNLGEFHMTFAVAKDHP 191 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA + E + YP I+V D+ + + ++I V + + K Q G G+ Sbjct: 192 LAQTASEVTEDMIDDYPVIVVPDSTQMMTPQTVGWTRRTQTISVDNMSEKIAAQKAGLGV 251 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G+LP++ +R+ + S L+ ++ + L A ++ G QW + Sbjct: 252 GYLPEHRIRKELESSDLIRLRLDD--NHGIALAAWRNGEPGPALQWFIDRI 300 >UniRef50_Q7NS01 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NS01_CHRVO Length = 299 Score = 260 bits (665), Expect = 4e-68, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 2/288 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L + GSF+ AAE L SA++YT++++E GL V ++ RS LT + Sbjct: 3 LTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL+ ++ R+ +QG E R+RI + L+ + + + Sbjct: 63 GERLLKDGRHLLDAARQLELRVSKQAQGWEDRLRIVVGDLVGFEQLLPS-IADFDRLQSD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ E + G+WDA+ +++A++ IGAP+ G IG + A HPLA Sbjct: 122 TRLHFIRESFGGIWDALYDDRADLVIGAPNQ-PPPGDYFTRNIGDYDFVLVAAAGHPLAA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 PEP+ LR Y + V DT+ + + G LL GQ+ + V K + + G G G L Sbjct: 181 EPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL 240 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 P VR + LV + M A + G+ QW ++ Sbjct: 241 PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRL 288 >UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRB7_9GAMM Length = 300 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 1/291 (0%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T E+L R GSFS AA L S I+YT+ +++ L V LF R R LT Sbjct: 4 SRITLESLEVLDAIDRKGSFSAAAASLYRVPSKITYTVNKLQDDLGVTLFVREGRRSVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G+ + +LL+ + + + +G E+R+RI ++ +L + LQ + Sbjct: 64 PAGKLLLEQGRELLDAADRLVEKTKQLERGWESRLRIALDTVLDSDFLLPH-LQAFCDEQ 122 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + +EV G W+A+ ++A++ + A + + G++ I I W FA+AP HPL Sbjct: 123 PDTEVDIASEVLGGTWEALQLDRADLVVAAAEASPESAGVESRPIMTIPWVFAVAPHHPL 182 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P++E + I+V D++ + Q + V K Q G G G Sbjct: 183 AEQAAPVSEDVRLQHRAIVVRDSSREHPAVTLRVFERQPRMTVSSMADKIAVQRAGLGAG 242 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 FLP V + LV + P DS + +A + G+ +W ++ + Sbjct: 243 FLPRPRVERLLDTGELVEVPLQEPIPDSLLFIAWRRRDRGRALKWFIERLS 293 >UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9M6_9GAMM Length = 294 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 1/293 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L + GSF+ AA L S ++YT++++E L V+F + R LT + Sbjct: 3 LTLDALEVLDAIDKKGSFAAAANALFRVPSTLTYTVQKLEEDLGFVIFRKEGRRSVLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + LL A+ + + G E + I ++ + + +L ++ Sbjct: 63 GRVLLEEGRHLLLATQAMIDKAHQVDSGWEVSLNIALDTVWDIEQLLP-ILAEFQQLNTG 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + EV G +A+I ++A+I +G P G+ + E+ +W A DHPL Sbjct: 122 VEINLLEEVMGGSLEALIEDRADIVLGGPPPSATIQGLQFKEMMQSQWCLVTAKDHPLTK 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P+ + Y +I+++D++ + ++ Q+ I V K G GIGFL Sbjct: 182 TSLPLTNEMMTAYTSIVIKDSSRQSPIQSHRIMAKQKQIKVASMAQKISLIEAGIGIGFL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 P + ++ + + LVT + P Q + + + + G+ +W + + + Sbjct: 242 PRHKIQGKLDEGTLVTLETAEPTQSTPQYCSWKRNNKGKAARWFIDRILSDKV 294 >UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bordetella RepID=Q2L0D3_BORA1 Length = 316 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 2/300 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E LL AR GSF++AA ELG SA++Y ++++E LD +LF RS +LT + Sbjct: 14 ITPELLLMVDAIARHGSFARAARELGKVPSAVTYAVRKLEDSLDALLFDRSGHRAQLTPA 73 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ R LL+ + R+ I+ G E +RI I+ +L L++ + Sbjct: 74 GQMLLRDGRHLLHSLDDLACRVKRIATGWEVELRIAISAVLPIEP-LFDLMRDFQALQSG 132 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + ++ EV G WDA+ +A++ IGA + GG +G ++ F +AP HPLA Sbjct: 133 TSLRLSEEVLGGAWDALAAGRADLIIGADASGAPSGGYRSVAMGQTQFGFCVAPQHPLAR 192 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + E + Y I+V DT+ + + LL ++ +++P+ K + QI G G G L Sbjct: 193 LGRALTEQDIAQYTAIVVADTSRDLPPRSRGLLPTRDIMVMPNMRAKIEAQIRGLGCGHL 252 Query: 245 PDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 P +A+T+ LV N P ++L A + GQ W + + + Sbjct: 253 PLTRAAKAITEGQLVVCATENLPPPTEQVLYAWRPEHPGQALNWWLDKLKSPRLCERLLG 312 >UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=Burkholderia RepID=B2TAV1_BURPP Length = 359 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 78/303 (25%), Positives = 143/303 (47%), Gaps = 3/303 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN + E L R G+F+ AAE L S++SY ++++E L V LF R+ R Sbjct: 54 MN--LSFEVLQVLDAIDRTGTFASAAETLHKVPSSLSYLVQKLELDLGVKLFDRTGRRAT 111 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + LL A++ + I G E+ + + +++++ + K Sbjct: 112 LTHAGRVVVEEGRRLLEAAEALEFKAKRIEHGWESELHVAVDEIIPF-DLLWHHVGEFYK 170 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ ++ EV G WDA++ +A++ +GA + IG+++ F +APDH Sbjct: 171 LKLDTRLHLSKEVLGGSWDALLTRRADLIVGAAGDPPPIPNLIARPIGSLKHVFVVAPDH 230 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA +P P+ + + + + DT+ + + L QE + VP K QI G Sbjct: 231 PLASIPGPLTMDMVARHRAVAIGDTSRKLAPRTIALAVNQEVLTVPTLEAKLAAQIRGLA 290 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 G +P+ + +A++Q LV +++ R + LA + +G+ QW Q ++ Sbjct: 291 AGTIPECLAVDALSQGELVQKEVIGMRDVTHFYLAWRDDESGKALQWWVDQLDRPNLIDE 350 Query: 301 IYQ 303 + Q Sbjct: 351 VVQ 353 >UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZL9_PSYIN Length = 301 Score = 258 bits (659), Expect = 2e-67, Method: Composition-based stats. Identities = 74/296 (25%), Positives = 137/296 (46%), Gaps = 1/296 (0%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T E + + GS++ AAE+L SA+SY ++++E L V +F + R LT Sbjct: 4 STITLEAITVLDAIEKRGSYAAAAEQLNKVPSALSYIVQKLEDQLQVTIFQKQGRRSVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G+ + +L + + TI+ G E ++ I I+ +L T ++ Sbjct: 64 PAGKNLLNEGRVILEAVERLTVKTQTIANGWEPKLNIAIDSILQT-TVIFSVVNDFLTAC 122 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ ++ E+ NG W+A+ ++ ++ IG P GI + FA++P HPL Sbjct: 123 PNVEMDISEEILNGAWEALAEDKIDMIIGVPGPAPKQKGIQTLHLCDFEPVFAVSPTHPL 182 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A +P++ + + Y ++ DTA + ++ + VP + K + QI G G G Sbjct: 183 AKQAQPLSNALIAEYRAVVAHDTARNWIAQTQSVISEDKYFYVPSMDYKIRAQIAGIGCG 242 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 FLP ++E + L+ QI R + LA + G+ + +++ N L Sbjct: 243 FLPRCRIQEFLQNGQLLELQITPTRPAVPLYLAWKVVNQGKALKMLREMLIANKAL 298 >UniRef50_P76369 Uncharacterized HTH-type transcriptional regulator yeeY n=105 Tax=Enterobacteriaceae RepID=YEEY_ECOLI Length = 309 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 140/296 (47%), Gaps = 1/296 (0%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + L+ + GSF+ A+ +L T SA+SYT+ ++E+ L++ L RS + T +G+ Sbjct: 5 LDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGK 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 K ++L+ ++++ + +G E + I ++ + A L++ + + Sbjct: 65 MLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDD-TFPFSLLAPLIEAFYQHHSVTR 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + V G WDA+ +A+I +GA ++ +G + FA+AP HPLA Sbjct: 124 LKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEE 183 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 EP+ ++ Y I+V DTA LL QE+I V DF TK + QI G G G+LP Sbjct: 184 EPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPR 243 Query: 247 YMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 Y+ + + L+ +++ + + G + W + + N + G+Y Sbjct: 244 YLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVY 299 >UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZV2_9NEIS Length = 311 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 1/298 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E L R GSF+ A E L S+ISY I ++E L V LF R+ +LT + Sbjct: 3 LSLEALEVLDAIDRHGSFAAAGEALFKVPSSISYMIGKLEEDLGVTLFDRTGLKAKLTPT 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ LL A++RR I G E+ +RI ++ +L + + Sbjct: 63 GQAVLEDGRRLLRGAIALERRAKKIEAGWESELRIAVDVILPFRILLP-YITTFYGENSQ 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + EV G W+A+++ +A+ AIGA D + G IG ++ AFA+AP HPLA Sbjct: 122 TRLLFSHEVSGGPWEALLDGRADFAIGALDHAPNLPGFSSCAIGQVQSAFAVAPGHPLAD 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 EP+ S + Y + ++DT+ + L GQ+ +LVP+ K + + G G GFL Sbjct: 182 AVEPLDRSVIGQYRLVEIQDTSRQRLLRPLDLQIGQDFLLVPNLEAKLEAVLAGLGCGFL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 P +V+ L +++ PR + A G QW ++ + + Sbjct: 242 PGCLVQHCANLGKLKVKEVKEPRPLKQFFAAWNTGDAGLGVQWWIEKLSQGDFINDAL 299 >UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=Vibrionales RepID=A5F463_VIBC3 Length = 302 Score = 255 bits (652), Expect = 1e-66, Method: Composition-based stats. Identities = 79/304 (25%), Positives = 154/304 (50%), Gaps = 5/304 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F++ +L AR GSF+ AAE L SAISY+++++E+ L VVLF R R +ELT Sbjct: 2 MFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTP 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F +A LL I+ + + G +++ ++ ++ K +++ + F Sbjct: 62 AGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDK-MKPMVEAFYQTFD 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV+NG W+AI +A+I IGA + GG + ++G + WAF ++P+HP Sbjct: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHP-C 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + ++E + + I ++DT+ + K+ Q +L+P++ + + G G+G+ Sbjct: 180 VREQNLSEEFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 +P +M + + LV + + + + S L + ++ +W+ G +Y Sbjct: 240 MPRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWMVNYL---GSSDQLYS 296 Query: 304 DLLH 307 D L Sbjct: 297 DWLQ 300 >UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=Comamonadaceae RepID=A1TRK9_ACIAC Length = 315 Score = 254 bits (650), Expect = 2e-66, Method: Composition-based stats. Identities = 89/305 (29%), Positives = 154/305 (50%), Gaps = 5/305 (1%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T ++L A GSF+ AA +LG+ SA++Y ++++E LDV+LF RS R T Sbjct: 9 DALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPT 68 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E+G R+ LL + A+ R+ ++ G E ++ I ++ ++ +P L++ Q Sbjct: 69 EAGSELLREGARLLEEVEAVAHRVRRVATGWEPQLTIAVDGVI-SPTTLLELVEAFYAQS 127 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + ++ G +A+ + +A++A+G + G+ IG + + F +AP HPL Sbjct: 128 PPTRLKLRDDILTGTLEALTSGRADLALGVAVNATNASGVQGKVIGDLLFLFTVAPHHPL 187 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P P+ ++ LR + I V D+A +G LL GQ+ V TK Q Q+ G G G Sbjct: 188 ATAPGPLTDTVLRQHRAIAVADSAQHGGVTMG-LLGGQDVFTVDSMQTKLQAQLRGLGAG 246 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT---QHSATGQVTQWIKKQFAPNGILT 299 FLP+ MVR + LV R++ P + R+ A H+ G+ W +Q Sbjct: 247 FLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLESPATRA 306 Query: 300 GIYQD 304 + ++ Sbjct: 307 ALLEN 311 >UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=Rhizobiales RepID=A9CJD5_AGRT5 Length = 322 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 6/297 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST-RSI 59 M++ T + L F T A GSFS AA L S +SYTI +E L+VVLF R+ R Sbjct: 1 MDANPTLDQLQVFLTVAETGSFSAAARALNRAQSVVSYTIANLEAQLEVVLFERNGVRQP 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LT+ GR A ++ ++ R + QG+EA + + I+ ++ A +L+ + Sbjct: 61 KLTDEGRAMLEDARRIVAGLQEMRARAKGLKQGLEAELSVAISTMVPAEAVVA-VLRDFR 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +QFPT +++ V D +++ +A I IG L + ++G +A D Sbjct: 120 EQFPTVTLSLNVGELGMVMDMVLSRKAGIGIGGA-VLRQDDDLVMEKVGHSFMLPVVAAD 178 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + P+ + +R ++V D + + +L ++ V D TK Q G Sbjct: 179 HPLAQIERPLVLADVREEVQLVVTDASGLTKGRDFNVL-SYKTWRVSDIATKYQLIKGGL 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH--SATGQVTQWIKKQFAP 294 G G LP +VR +T L ++ Q L + S G QW+ + F Sbjct: 238 GWGGLPASIVRNDLTNGSLKALELEAYEQGEYPLFTLRRVDSPAGPAGQWLAQAFQE 294 >UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8U4_9DELT Length = 305 Score = 253 bits (646), Expect = 7e-66, Method: Composition-based stats. Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 10/301 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 T + L F + GSFS AA +LG SA+SY I +E +++ LF R+ R LTE Sbjct: 5 PITLDQLAVFLSIVEHGSFSGAARKLGRAQSAVSYAIANLERLIELELFDRTGRKPVLTE 64 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR A + + R + +G+EAR+ + ++ PK L ++++P Sbjct: 65 AGRALLDDARAVHGQVDHLLARAQRMREGVEARLSVAVDVFFPMPKLLT-ALASFRRRYP 123 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL- 182 + + TE V + + + P I+ + I A DHPL Sbjct: 124 EVPVHLRTEALGAVAQLVADGAVQFGVSVPLRDFPSA-IERRPLWPIEMVTVCAADHPLA 182 Query: 183 --AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 A E + +++R + +++ D + T+ + + G ++ + D K C I G G Sbjct: 183 QRARADEAVPLARMREHTQLVLTDRS-TLTAGLDVAVAGDDNWRLADLPAKQACLIAGFG 241 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML----LATQHSATGQVTQWIKKQFAPNG 296 G +P +MV + + LV ++ + ++ + S G +W+ +QFA G Sbjct: 242 WGNMPRHMVEGDLAEGRLVRVEVSEWGPATYIVEMCTIHRAASPPGPAGRWLLEQFARLG 301 Query: 297 I 297 Sbjct: 302 A 302 >UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=A1K9S8_AZOSB Length = 306 Score = 252 bits (643), Expect = 1e-65, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 2/294 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S T + L R SF+ AAE L SA+SYT+ ++E L V LF RS R Sbjct: 1 MASPITLDALRVLDAIDRKQSFAAAAEALFRVPSALSYTVSKLEEDLGVQLFDRSKRRAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + +L + R + + G E +RI ++ +L A L+ + Sbjct: 61 LTPAGRLVLEQGRHILTATEELTRLVQAVGDGWEVELRIAVDSVLDFAPIYA-LVAEFQT 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ ++ EV G WDA+ + ++ + GGI +G + + FA+A H Sbjct: 120 LQHRTELLLSEEVLGGSWDALNTGRCDL-VIGAAGEAIAGGIATRALGEVEFVFAVAAGH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PL + +P+A L +P ++V D++ + + LL G+ ++VP K + Q LG G Sbjct: 179 PLCALAQPLATEALLDFPTVVVADSSRYLPARSTGLLDGRSRVVVPSIARKIEAQCLGLG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 +G+LP + + + L + + +A + +A G+ +W + A Sbjct: 239 VGYLPRHRIGAELAAGTLCELSLEKAHPPQALSIAWRSAARGKALRWFLDRLAA 292 >UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=Alteromonadales RepID=A8H1R5_SHEPA Length = 304 Score = 249 bits (637), Expect = 7e-65, Method: Composition-based stats. Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 6/301 (1%) Query: 1 MNSI-FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSI 59 MN+ + E LL GS++ AAE+L SA+SY ++++E L V LF R R Sbjct: 1 MNTPPLSIEALLVLDAIEHRGSYAAAAEQLNKVPSALSYIVQKLEEQLGVTLFVRQGRRA 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 LT +G++ + +L+ + + TI+ G E ++RI + ++ ++Q Sbjct: 61 VLTPAGKHLLVEGRKVLSVINTLSEQTQTIANGWEPKIRIACDSIIDINP-IFTVIQQFL 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 + ++ V EV NG W+A+I ++ ++ IGAP + + GI + G + ++ Sbjct: 120 SEHQNIEVDVQEEVMNGTWEALIEDRVDLVIGAPAPVPNQKGIRAIKTGELNSVLVVSKS 179 Query: 180 HPLA----FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 H LA E S+L Y +++V DTA LL G + V K Sbjct: 180 HELATEALRANEQTQTSELSKYRSVIVHDTAKHEIPWSANLLEGSQHFYVSSITQKIAAI 239 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 + G GIG LP M + + LV ++ N + +A + + G+ +K Sbjct: 240 LAGIGIGHLPTSMAQPYIELGELVVIELENKPAPQDLFMAWKITNKGKGLNRLKAMLLEE 299 Query: 296 G 296 Sbjct: 300 N 300 >UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=Q39A93_BURS3 Length = 302 Score = 249 bits (637), Expect = 8e-65, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 5/298 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + L AF GSFS AA +LG S +SY + +E L + LF R R + Sbjct: 1 MDRSPNLDQLRAFVAVVEAGSFSGAARQLGRAQSVVSYAVASLEAQLGMPLFERGRRRPQ 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G A L ++ + + G+EA + + ++ + PK +Q + Sbjct: 61 LTAAGEVVLADARRLDMLMGQLQAKTAGLRGGVEAELSLAVDVMFPLPKLVEG-MQAFAE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FPT + + E GV + + + I P ID T +GA+ AP H Sbjct: 120 AFPTVALNLAIEALGGVLKLVFDGGCVLGISGPIPNWPDA-IDATSMGALELLTVAAPMH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA PI S+ R + I++ D + + + + ++ + V D K + + G G Sbjct: 179 PLALRDAPIPLSEAREHTQIVLTDRSKVTDGQS-FGIYATRTWKVADLGAKHRLLLAGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPR--QDSRMLLATQHSATGQVTQWIKKQFAPNG 296 G +P +++ + + LV Q+ + R + L+ A+G QW+ ++ G Sbjct: 238 WGSMPMHLIEDDLQSGRLVPVQLADRRTFRYGLSLIRRADRASGPAAQWLIDYWSRQG 295 >UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZZ2_9PROT Length = 293 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 117/291 (40%), Gaps = 7/291 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L A G F AAE L + SAIS +K +E L + LF R LT Sbjct: 1 MTLDQLRALCAVVEKGGFHAAAEALYRSQSAISIAVKNLEQELGLSLFDRKGYRPVLTPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + KA +L+ + ++G E + I ++ + + +++ + + P Sbjct: 61 GHVLYGKARSILSRSEDMSSIASHFARGEEPEISIALSAIAPVEQVL-DVIKQISQSAPA 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++++ E G + + + AI + + + + + + I+PD PLA Sbjct: 120 TRMSLQVENMGGTLERLQEKDVDFAIA--EQFVPVEYAEQVRLTSTQMIPVISPDFPLAT 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 I S L Y ++V DT+ K+ +L G LV DF+ K + + G G G + Sbjct: 178 RYPAITLSDLEAYVQVVVRDTSRNQPKRSAGVLEGAPQWLVNDFDMKKRMILSGAGWGRM 237 Query: 245 PDYMVREAMTQSLLVTRQ---IHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 P + V E + L+ + + D L G V + + + Sbjct: 238 PRHRVAEELADGRLLALSGKGLDAVKID-MYLFRRTGEPMGPVGERLWQLL 287 >UniRef50_P67661 Uncharacterized HTH-type transcriptional regulator yhaJ n=105 Tax=Enterobacteriaceae RepID=YHAJ_ECO57 Length = 298 Score = 245 bits (626), Expect = 1e-63, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + Sbjct: 4 ERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKF 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR + LL + + +++G E + I L+ TP L+ L + Sbjct: 64 TNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFP-LIDKLAAK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 Q+ + TEV G W+ + +A+I I I+ ++ + + APDHP Sbjct: 123 -ANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + PEP++E Y I V DTA LL Q + V K Q + G G+ Sbjct: 182 IHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGV 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P MV + + + L + +++A + + G+ W ++ Sbjct: 242 ATMPYPMVEKDIAEGRLRVVS-PESTSEIDIIMAWRRDSMGEAKSWCLREI 291 >UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=Rhodobacterales RepID=Q1GM59_SILST Length = 296 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 4/298 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+A G+F AA+ L SA+S+ IK++E L LF+R T L+ Sbjct: 1 MTLDQLIALDAIVASGTFRAAADRLNKAQSAVSHQIKKLEDELGFDLFSRDTYRPRLSPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F+R+ T +L +K + E V I I + LL + + FP Sbjct: 61 GEVFYREVTRVLEQVNGLKTVAAGLRSEQEPLVSIVITATMSLDPILT-LLGEVGRAFPA 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I + TE+ G +++ +A++ I D + ++ +G I +P P A Sbjct: 120 THIKLVTEMMGGPLARLMSGEADLIIAGLDD-VPIDEVETRPVGTITIRPVASPAFPAAD 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +++ Y ++V T + LL G + V DF K G G G + Sbjct: 179 PARVKSRREMQSYTQVVVSGTGGKEYDQSRDLLSGGQRWTVSDFQAKISIIKAGLGWGGI 238 Query: 245 PDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P++++R+ + LV I PR + + G+V I GI G Sbjct: 239 PEHLIRDELKTGALVPLAIEGYPPRHTEIFAIRRRDRPMGKVMSRIWDDLGRGGIQDG 296 >UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteria RepID=B2SUE3_XANOP Length = 314 Score = 245 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 82/296 (27%), Positives = 139/296 (46%), Gaps = 3/296 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E L R GSF+ AA+ L S ISYT+ ++E L V LF R T++ Sbjct: 3 ISLEALQILDAIDRRGSFAAAAKVLFKVPSTISYTVAKLEEDLGVQLFERVGPKATPTQA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR R+ LL ++ R+ ++ G E+ V I ++ +L ++L + Sbjct: 63 GRELLREGRHLLRAAQELEVRVRRVASGWESDVAIGLDAVLPAALLQPQIL-DFYTVADS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V +E +G W+A+++ + ++ + A + GGG IG +R+ FA+A HPLA Sbjct: 122 TRLRVLSESLSGGWEALLDRRVDLIVAAGEG-PSGGGYVAEPIGTLRFVFAVASTHPLAS 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++L + I V D+A + + LL G++ + VPD TK Q+ G G GFL Sbjct: 181 AG-VLGAAELAEHRAIAVADSARRLLPRTVGLLSGRDVLTVPDMRTKLLLQLAGAGYGFL 239 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P+ R A+ L Q+ + D LA + G+ W ++ G+ Sbjct: 240 PEPYARGALQDGRLREVQVETHKPDETFYLAWRPGEEGEALGWWRRALRSEGLFDS 295 >UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales RepID=Q21E79_SACD2 Length = 304 Score = 244 bits (623), Expect = 3e-63, Method: Composition-based stats. Identities = 76/299 (25%), Positives = 127/299 (42%), Gaps = 11/299 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + E AF GSF+KAAE L + SA+SY I ++E L + T+ R Sbjct: 1 MIPKISLEQWAAFKAVVDEGSFAKAAEALNKSQSAVSYAIAKLEEQLPTPVLTQQGRKAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +R ATDLL I+ ++ G E+ V I ++ L ++ LQ Sbjct: 61 LTEAGKQLYRHATDLLAQAATIENTAKYLASGWESEVTIAVDAL-FSMGAVFCALQHFSV 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + +G +A++ +A++ + G T +G + + H Sbjct: 120 SSPQTRLRILETTLSGTEEALLGRKADLVLTGT----IPPGFSGTRLGEVSMIPVVGQQH 175 Query: 181 PLAFVPE---PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 PL + + PI E +L + I++ DT + GW L ++ V T + Sbjct: 176 PLVQLMQQSGPITEQELGRHRQIVLRDTGTKREQSSGW-LRAEQRWTVTHAATSIEAVKN 234 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G FLP + + + L+ + R S L+ T+ G TQ I +Q Sbjct: 235 GLGFAFLPKEKILQELEAGSLIEVALAEKMERFISLYLIKTERQNAGPATQAIAQQLVE 293 >UniRef50_D0WIW9 HTH-type transcriptional activator AllS n=1 Tax=Slackia exigua ATCC 700122 RepID=D0WIW9_9ACTN Length = 323 Score = 243 bits (621), Expect = 6e-63, Method: Composition-based stats. Identities = 92/307 (29%), Positives = 142/307 (46%), Gaps = 1/307 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E L F GS + AA L T SA+SY IK +E L + L R+T +I T + Sbjct: 9 LDLEALQTFLLVIEEGSLTAAASALYKTPSAVSYRIKALEESLGIQLLERTTHAIAPTTA 68 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ KA DLL +D I GIE + +N LLY A+LL L ++F + Sbjct: 69 GKRLAAKAQDLLEFHRGFYDELDAIKTGIEPSFTLVVNNLLYDGVAVAKLLAHLSEKFGS 128 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + V V+ GVWD +++ + AIGAP T +G + W +P+HP+ Sbjct: 129 AALNVQKSVFTGVWDYMVHEGGSFAIGAPSHHSIDERFVTTPLGLVEWVLVCSPNHPILR 188 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++ +P + ++DT+ + W L GQE I+VPD TK C ++G GIGFL Sbjct: 189 TGIEVDGDSIKQHPVVNIQDTSTHSIGRPAWRLEGQEEIIVPDLETKIHCHVMGLGIGFL 248 Query: 245 PDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 P + + L + RQ S M A + + G++ +++ N L + Sbjct: 249 PKPIADRWIAAKKLRALSAKDIMRQPSPMSYARKKNDDGRIGNYLEHLIKRNHELIQPFL 308 Query: 304 DLLHREN 310 L +N Sbjct: 309 SPLIGQN 315 >UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=B1Y0I3_LEPCP Length = 332 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 82/308 (26%), Positives = 137/308 (44%), Gaps = 21/308 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L T AR GSF+ AA ELG SA++Y+++++E LD +LF R +R +LT + Sbjct: 8 LTPEALEMMDTIARTGSFAAAARELGKVPSALTYSVRQLEEALDALLFDRRSRQAQLTPA 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK----- 119 G R+ LL + R+ ++ G E + I ++ ++ P L+ Sbjct: 68 GDELLREGRRLLQQIDTVANRVQRVANGWETELAIAVDNIV-APAALFDLIDAFFTLPSG 126 Query: 120 --------------KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYT 165 + P ++ + EV G W+A++ QA++AIG I Sbjct: 127 VGDDTVATGQTASGHRGPPTRLKLLDEVMAGTWEALVTGQADLAIGVTLPGAAFEDIQTA 186 Query: 166 EIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV 225 +G +R A+AP HPLA P+ + + + + D+A + + GQ+ + V Sbjct: 187 VLGPLRMVMAVAPHHPLAREAAPLCSDTIARHRIVAIADSAKRHDPITVGVQAGQDVLTV 246 Query: 226 PDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQV 284 P K + Q+ G G G LP+ +VR LV + P ++ + A + S A G+ Sbjct: 247 PSVAAKLEAQLRGLGCGRLPENLVRRHAEAGRLVVLETEEPPREIELHYAWRRSAAQGRA 306 Query: 285 TQWIKKQF 292 W Q Sbjct: 307 LGWWLSQL 314 >UniRef50_A8GHI5 Transcriptional regulator, LysR family n=4 Tax=Enterobacteriaceae RepID=A8GHI5_SERP5 Length = 313 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 75/307 (24%), Positives = 142/307 (46%), Gaps = 3/307 (0%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + + + + +T GSFS AAE L T SAISY + +E+ L V LF R+ I LT Sbjct: 2 TRLSLDAIKIISTIKSTGSFSMAAEALHKTPSAISYRVSNIESKLCVKLFHRNGPMITLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 + G + ++ + +LN ++ R+ I + + +RI ++ T ++ + Sbjct: 62 DEGEFLLQEGSWILNAVQDLESRVRNIPK-FDNNIRIVVDNFFPLETITQD-IRDYIQHS 119 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P I+V E NG WDA+ NN+A++ I + D +G + + ++P HP Sbjct: 120 PNANISVQREALNGTWDALKNNRADLIIAI-GQIPDSVQAKTLMLGKLNFVLCVSPSHPF 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A +P+ ++Q +++ D++H + K+ + Q ++V D +K G G G Sbjct: 179 AAQKKPVDKNQRLNDIVVVIADSSHELPKRNHGTMPLQRQLVVCDVESKLSLLKRGIGHG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 FLP ++ + + LVT + + D + LA ++ G W ++ + + Sbjct: 239 FLPPALIEKELASGELVTVPVDMQKGDEMIWLAWHPASKGAGFSWWHERLTRKSDVFSLM 298 Query: 303 QDLLHRE 309 + R+ Sbjct: 299 GREVIRD 305 >UniRef50_A6GPV4 Probable transcriptional regulator transcription regulator protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPV4_9BURK Length = 303 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 78/292 (26%), Positives = 140/292 (47%), Gaps = 4/292 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L GSF+ AA L SAI+Y ++++E LDV+++ RS +LT + Sbjct: 3 INLDSLALLELIEARGSFAAAAVALNKAPSAITYQLRQLEESLDVLIYDRSGHKAKLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + LL A+ +R+ ++ G EA +RI ++ ++ K +Q Sbjct: 63 GKALLEEGRKLLESTDALTKRVKAVASGWEAELRIVLDSVVPFEKAIP-WIQAFDALESP 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAP---DTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ ++EV +G W+A+ + +A++ IG+ + G+ G + FA+APDHP Sbjct: 122 TRLRFSSEVLSGTWEALYSGRADLLIGSRLDQNQFASATGLHIQSFGQSLFVFAVAPDHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA EP+ +R Y + V DT+ L GQ + VP+ TK + Q+ G G Sbjct: 182 LAHAEEPLCIDTIRQYRAVAVGDTSRNFKPLTFGLQSGQAVLTVPNLQTKVKAQLAGLGC 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G+LP ++ + L+ ++ + + S + A Q + G+ W K A Sbjct: 242 GWLPWNLIEHEVANGDLLIKKTEDVTRQSSLCFAWQRGSQGKALDWWTKHLA 293 >UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKF9_CELJU Length = 330 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 120/294 (40%), Gaps = 8/294 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E A G +++AAE L + S++SY I ++E+ L V +F R Sbjct: 33 ENKVTLEQWRALLAVIDAGGYARAAELLNKSQSSVSYAISQLESALSVKVFQLQGRKAVA 92 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +G +R+A LL +++ +S +E ++I + L+ P + L+V + Sbjct: 93 TPAGELLYRRAKQLLEQAERLEKSAGCLSVQVEPLIKIAAD-LIIPPARILQCLEVFSEH 151 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FP ++ V V +G DA++ Q ++AIG G ++ + + DHP Sbjct: 152 FPETRVEVFESVLSGTEDALLQRQVDLAIGGR----VPPGFMGEKLVTVTMHGVSSADHP 207 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 L + PI +R + I+V D+ + GW + V T +G G Sbjct: 208 LQQLGRPINYEDMRQHRQIIVRDSGQYRRRSEGW-QEADQRWTVSHIKTSLDAIRMGLGF 266 Query: 242 GFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 +LPD E + L + R+ + L G T+ + + Sbjct: 267 AWLPDPYTHEDIAAGRLKYLPVEVGYVREVTTYLTFADRDFAGPATRHLAEVLK 320 >UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=Burkholderiaceae RepID=Q1BN17_BURCA Length = 325 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 74/302 (24%), Positives = 142/302 (47%), Gaps = 1/302 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +E+ L GS S+AA LG S +S+ +++ET D +LF R ++LT Sbjct: 21 MLSEDELALLDAIRATGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRGYRLQLTP 80 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ +A L D + +R+ ++ G E R+ I +++L +++ Sbjct: 81 AGQLLTDEAARLALDVARLTQRVRQVASGWEDRLWIVSDEVLEFDTLLP-VVRAFDALDS 139 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + T EV G W+A+ + +A++ +GA + L G+ + E+GA+ W FA++P HPLA Sbjct: 140 GVSLRFTHEVLGGTWEALRDGRADLVVGATNELPAMPGLKWFELGAMEWVFAVSPRHPLA 199 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + +++V D++ + LL GQ + VP K Q G+G+ Sbjct: 200 AASGVLTRDAIGAHRSVVVADSSRRAAGRAYGLLGGQAVLAVPSMRAKILAQRDALGVGW 259 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 +P V + + LV + +PR+ + + +A G+ QW +Q + + Sbjct: 260 VPRRRVASLLARGELVEKPTADPREPNLLYVAWHGDRDGRALQWWLEQLREPRLAQRLLD 319 Query: 304 DL 305 + Sbjct: 320 GI 321 >UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A8GJY7_SERP5 Length = 301 Score = 236 bits (602), Expect = 9e-61, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 130/291 (44%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + Sbjct: 4 DRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKF 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR + LL + + +++G E + I +++ L P L+ L + Sbjct: 64 TNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTI-VSEALSPPSKLFPLVDKLALK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 Q+++ TEV G W+ + +A+I I I+ ++ + + AP HP Sbjct: 123 -ANTQVSILTEVLAGAWERLEQGRADIVIAPDMHFRASSEINTRKLYKVMSVYVAAPGHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + PEP++E Y I V DTA LL Q+ + V K + G G+ Sbjct: 182 IHLEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQQRLTVSTIEDKRLALLAGLGV 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P MV + + + L R + +++A + + G+ W ++ Sbjct: 242 ATMPYPMVEKDIEEGRLRVVGPEYSR-EVDIIMAWRRDSMGEAKAWFLREI 291 >UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46RP0_RALEJ Length = 306 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 1/287 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L + AR G+F+ A +EL S++SY ++++E+ L + +F RS + LT + Sbjct: 3 ITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTLA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL ++ R+ G EA ++I + L+ + + + Sbjct: 63 GEVLLDEGRRLLRAANDLEERVRRAEAGWEAELKIATDALVPFDAILP-FISAFQAENSY 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E+ W A+ N ++ IGA G+ G R F +AP HPLA Sbjct: 122 TRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLFTVPAGTARSIFVVAPGHPLAA 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 V EPI + L + + V + + L+ GQ I VP + K + G G+L Sbjct: 182 VEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGYL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQ 291 P + + + LV R++ R +A + + G+ W ++ Sbjct: 242 PVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIER 288 >UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FHS9_SORC5 Length = 309 Score = 235 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 77/301 (25%), Positives = 129/301 (42%), Gaps = 12/301 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ T E L F A GSFS AA +L SA+S+ + +E+ L + L+ RSTR Sbjct: 1 MHDSITLEQLRTFIAVADEGSFSAAARKLRRVQSAVSHAMANLESQLGIALWDRSTRIPA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR A + D A+ ++ G++ V +C++ ++ L + Sbjct: 61 LTEHGRVLLGAARRVCADADALSSAAQRLAGGLDPLVSLCVDA-IFPLSALVDLCVEFAR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +PT ++ V TE V D +++ + + P G++ + ++R + H Sbjct: 120 AYPTVELVVHTETMAAVADRVLDGTCQLGVVGP--AATAQGLERQHLTSVRMVAVVGEAH 177 Query: 181 PLAFV---PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 PLA +A QLR + I++ + + + L + V D TK + Sbjct: 178 PLAAAAPRGARVATEQLREHVQIVLSERGGARSPEQAVL--SPRTWRVVDLETKRELLCA 235 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSA---TGQVTQWIKKQFA 293 G G G LP++M+R+ + LV D +L LA H G QW+ K+ Sbjct: 236 GLGWGNLPEHMIRDDLNAGRLVRIWPAAWGDDEHVLPLAVVHRPGLVQGPAGQWMLKRLV 295 Query: 294 P 294 Sbjct: 296 E 296 >UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=Mesorhizobium RepID=C8SVH9_9RHIZ Length = 317 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 129/298 (43%), Gaps = 8/298 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSI 59 M T + L A GSFS A +L S ISY I +E L + LF R TR Sbjct: 1 MQPNPTLDQLQILVAVADTGSFSAAGRKLNRAQSVISYGIANLEAQLGLKLFEREGTREP 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LTE GR A ++ ++ R D G+EA V + ++ L + R+L+ + Sbjct: 61 QLTEIGRAMLEDARRMIGVLQRMRSRADGHHHGLEAEVALSVDASLPS-SVLVRVLKAFE 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 QFPT + + + D +++ QA++ IG LL + IG + A AP Sbjct: 120 MQFPTVMLRLHIGTLGLIPDHVVSGQADLGIGG---LLGDVDVHLVRIGFMSIVLAAAPS 176 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA +P+P+A +R + ++V D + + + + + + D TK G Sbjct: 177 HPLALLPKPLALEDVREHTQLVVTDQSERTKGR-DFGVFAYRTWRLTDMRTKHMLMREGL 235 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATG--QVTQWIKKQFAPN 295 G G LP +++ + + LV + + L A + T W+ ++F Sbjct: 236 GWGGLPRWLISDDLASGRLVEIDLEPFSEVRSPLFAMHRNDTSPKPAAAWLIERFKRG 293 >UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=Q0K871_RALEH Length = 305 Score = 233 bits (596), Expect = 4e-60, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 120/299 (40%), Gaps = 12/299 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ + L F GSFS AA LG T S +S + +E L V LF RS+R+ LT + Sbjct: 3 FSLDQLQVFALVVETGSFSAAARRLGKTQSTVSAAVANLEIDLGVPLFDRSSRNPALTGA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +A +L +++ +++ + + I +L +++FP Sbjct: 63 GRKLLTEAEAVLERCRSLQAHAASLADANPPGLTLAIE---IPYHAVMPVLAEFEREFPY 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +T+ VY V + ++ +A + I + + ++G + + P HPLA Sbjct: 120 VDLTIRNPVYGDVSELVLQGEAELGIAFAQPHY-APELAFVQLGKLIMVHVVHPGHPLAG 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++ + L Y + +AH L + + G G L Sbjct: 179 REQ-VSFADLHAYRRLAF--SAHADKLPTSEYLRAARVWRAESYLALVEMVKSGLGWATL 235 Query: 245 PDYMVREAMTQSLLVTRQIHN----PRQDSRMLLATQH-SATGQVTQWIKKQFAPNGIL 298 P +VR A+ + LV + S L+ + G+ QW++++F N + Sbjct: 236 PRQLVRAALERGELVELDLAAYPYTDWLVSVDLIWAKSGRPQGRAEQWLRQRFRENMVF 294 >UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gammaproteobacteria RepID=B8CJ29_SHEPW Length = 292 Score = 233 bits (595), Expect = 5e-60, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 113/300 (37%), Gaps = 11/300 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E L F A GSFS A LG SA+S I +E L+ LF RS+R LT Sbjct: 1 MYNLEQLRMFVETAESGSFSACARRLGKVQSAVSQGIANLEIELNTNLFDRSSRKPSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G A +L Y + + ++ E +++ I+ L AR+L + FP Sbjct: 61 HGERLLPFAQAILRQTYELDSVTNALNLFHETEIKLAIDDALLP--MMARILDSFAEHFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + V + +A++ + + +D +G + + ++P HPLA Sbjct: 119 GTNLELYAVATPDVLSLVDGGKADLGLMFASSEFPQK-VDVCYVGNMPFNGVVSPAHPLA 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + L + +++ + FN G G G+ Sbjct: 178 EL-NMVTVADLIPHRQLLIRSLDGQALAHSPIV--SSHIWWGNSFNAINALVKQGLGWGY 234 Query: 244 LPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 +P YM + Q +V Q+ H P + + + G W+ A +L G Sbjct: 235 VPSYMAEQYERQGEMVCLQLSFDHKPWRVPIDRVMAKQKTKGPALTWLAD--AVTDLLDG 292 >UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2_9RHOB Length = 284 Score = 233 bits (595), Expect = 6e-60, Method: Composition-based stats. Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 8/285 (2%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 F AA GSFS A LG SA+S I +E L LF R+TR +LTE+G Sbjct: 1 MFIAAAESGSFSAAGRTLGKGQSAVSTGIVNLEVDLGFELFDRTTRKPQLTENGERMLTY 60 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 A +L + D+I G E VR+ ++ L P ++ L ++FP +I + + Sbjct: 61 ARAVLMQVDNMTTAADSIFSGEETSVRLMLDDALLLPS-LSQFLIEFGERFPATRIDLLS 119 Query: 132 EVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAE 191 V + + +QA+I + + G++ IG + + P+HPL + E I Sbjct: 120 GVSPDIPSIVAQDQADIGLMFSGGSVQ-KGVEQVFIGNLPFVSVCVPNHPLTKLTE-IGA 177 Query: 192 SQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVRE 251 ++L + +++ ++ + L + F+ + + G G +LP+++V Sbjct: 178 NELLSHRQLLLRSPQGSVLAQFPEL--STQVWHATSFHALRELVMQGVGWAYLPEHLVST 235 Query: 252 AMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 A+ L + H + +H+ G W+ Sbjct: 236 AIASGQLARLNLRFEHKLWSPPVECIKLKHARMGPAVSWLFDSIK 280 >UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTX4_9GAMM Length = 302 Score = 232 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 120/293 (40%), Gaps = 8/293 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E F G F++AAE L + S +SY + ++++ L + + T S R L Sbjct: 7 HPRITLEQWRCFVAVIDCGGFAQAAEALNKSQSTVSYAVNKLKSVLGLEVLTMSGRRAVL 66 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE+G+ +R A LL + A++ + + E + + I++ + L+ + Q Sbjct: 67 TEAGQVMYRGARQLLEESVALEGLVKPLQSEWETSLTLVIDEAFPLDVVLS-ALKAFEPQ 125 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ + +G +A+ A++ + G +I + + HP Sbjct: 126 SRGTRVHYHEAILSGSEEALDAGTADLVVAYR----VPPGYSGDQIYSAEFVAVTGASHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA +P+ L+ + +I++ D+ GW L Q+ V T + + G G Sbjct: 182 LAGSEKPLQSRALQKHTHIVIRDSGRYKQTDTGW-LRSQQRWTVSSIQTAVKTVLSGVGF 240 Query: 242 GFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQF 292 +LP + V E + + LV + R+ L+ G T+ + + Sbjct: 241 AWLPLHAVSEYLNKGELVRLNLEQGATRRGDLYLVYGHSDYVGPATKTLAQSL 293 >UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q1QPF6_NITHX Length = 309 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 67/297 (22%), Positives = 120/297 (40%), Gaps = 7/297 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + L F AA GSFS AA + T SA+S I +ET L VVLF R+ R + Sbjct: 1 MLESVSFDQLRMFVAAADEGSFSAAARRVRRTQSAVSEAILSLETQLGVVLFDRAGRYPK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G A +++ A+K R I+ G+EA + + + + A + + Sbjct: 61 LTTDGVVLLADARAVISGVDAMKARAKGIAGGLEAELT-AVLDVFLPIEVIAEAAREFRI 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 QFP + + E G +++ +A+I + L G+ + ++ A H Sbjct: 120 QFPATPLRIYVEALGGAVQPVLDGRASIGVVGSLPTLP-PGLIKERLFDVKLMMVAAASH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA I + +L + +++ D + + ++ + + D K I G G Sbjct: 179 PLASYRGTIPKEELARHVQLVLTDRSTLTEGRTIGVM-SPSTWHLADLFAKHAFLISGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQD----SRMLLATQHSATGQVTQWIKKQFA 293 G +P + V + + LV I + + G +W+ ++ Sbjct: 238 FGGMPLHTVARDIAKGRLVELSIEEAPPGGLPLPMFAVYREGEPPGPAGRWMIERLK 294 >UniRef50_Q316J6 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q316J6_DESDG Length = 294 Score = 230 bits (586), Expect = 6e-59, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 8/292 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F+ + L AF AA GSFS AA LG SA+S + +E L V LF R LT Sbjct: 1 MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G R+A +L + + R I+ G EAR+ + ++ + +L ++FP Sbjct: 61 AGETLLREAWTVLGECDRLLERAVAIAGGEEARLSLAVDDAVPVDWFV-DVLAAFGERFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ V + +A++ I P + ID +G + + A Sbjct: 120 FVQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAA-IDAVLVGHMPYVPVAAAH-HPL 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + L Y +I+V + T +++ W HG L Q + G Sbjct: 178 AALPAVGRRDLMRYRHIVVA--SRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWAS 235 Query: 244 LPDYMVREAMTQSLLVTRQIHNP---RQDSRMLLATQHSATGQVTQWIKKQF 292 LP ++V + LV + ++ +A G W++K+ Sbjct: 236 LPGHLVDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKEL 287 >UniRef50_A6DQJ6 Probable transcriptional regulator n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DQJ6_9BACT Length = 291 Score = 229 bits (585), Expect = 7e-59, Method: Composition-based stats. Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 6/290 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E + T GSF AA++L T AIS +I ++ET L + LF R R LT Sbjct: 1 MTLEQIHILKTIVDEGSFQAAADKLWKTQPAISMSINKLETELGLQLFDRGHRKTTLTAH 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + A +L + I +++ E + I I+ + L + + +P Sbjct: 61 GQRIYEYAEQMLINAEEITSLSQYLNEAHEEEIAIAIDTICPLKTLLI-LFKNFFQSYPK 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + EV G + + ++A+I I + +D + I AP+ Sbjct: 120 TRLKINFEVLGGTLERLEQDKAHIVIS--NLGSPSSPLDRIPLWDINMTPVCAPNSLNLD 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 I+ ++L+ P I++ +T+ + LL G + V D K + + G G G + Sbjct: 178 DQNYISTNKLKRSPQIVIPETSEARSNSKS-LLQGGQRHYVSDLEIKKEMLMAGLGWGSM 236 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA--TGQVTQWIKKQF 292 P + ++ + L++ + S A + G V+ + +Q Sbjct: 237 PQHKIKNELASGQLISFNSDHLETISIPFYACRRQDKRHGPVSSALWEQL 286 >UniRef50_D0X470 Transcriptional activator of LysR family n=1 Tax=Vibrio alginolyticus 40B RepID=D0X470_VIBAL Length = 314 Score = 229 bits (585), Expect = 8e-59, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 4/295 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S T E L R GSF+ AA EL S++SY I+++E LD+++F RS Sbjct: 20 VQSPITLEALHILDAIDRRGSFAAAANELDRAPSSLSYQIQKLEQDLDIIIFDRSGHKAH 79 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 TE+G+ + +L + ++ G E + I + ++ ++ L + Sbjct: 80 FTEAGKLILERGRAILQASEKLVNDATLLANGWELDITIAFDGIIPISNFFP-MVDALAE 138 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + ++ + E+ G W+++ +A++ I P + +IG + + + DH Sbjct: 139 VS-STRVRLQEEILAGSWESLNTGRADLLI-CPSLDTLPQEVKSEKIGKMSMYWVASADH 196 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 + E+ Y I + DTA ++ Q + V +F K + G G Sbjct: 197 YVHKRSGKFDEAAREKYRIIAIADTAREQPALSINIIQKQPRLTVTNFTAKVEALTAGLG 256 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 IG LP + + + +L + Q ++LA + + G+ W + N Sbjct: 257 IGTLPSQIAQPLIDSGVLKRIE-GTEEQPMDIILAWRRNTMGEAKSWCIQYLKKN 310 >UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS33_DESAD Length = 298 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 7/294 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E++ AF T GSFS AA LG S IS I +E L + LF RS + ++T+ Sbjct: 3 FSIEHIEAFVTVVDTGSFSAAARSLGKVQSQISTAIANLEDDLGITLFDRSGKYPQITQK 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G K+ LL + + D ++ G + +R+ +++ + T ++L +++FPT Sbjct: 63 GEELLFKSRKLLRQSEKLIKHADRLALGEQTLLRLALDEYMPL-HITTQVLNSFQERFPT 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + V V + + QA++ I P + G+ + ++ + + AP+HPLA Sbjct: 122 IDLEVLWGAVGNVQKNVSSGQADVGIDVPVDNIASSGLSFKKLSLMEFCAVAAPNHPLAD 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + + L+ Y M + ++ + L D + + G L Sbjct: 182 MKA-LTKETLQSYRQAMGM--SQHGSRLPDSFKKSDQVWLFEDSRLIHRLVLAGTVWAGL 238 Query: 245 PDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 P MV E + LV I N + + QW+ + F Sbjct: 239 PRNMVAEDLLSGKLVELPIKLAENELKGIFYYVWNVAHELTPAEQWLCENFGKK 292 >UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=Proteobacteria RepID=Q475I4_RALEJ Length = 326 Score = 229 bits (585), Expect = 9e-59, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 8/292 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + + L AF AA GSFS AA LG S IS + +E + LF R+ R LT Sbjct: 29 LSIDQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTGRYPVLTPV 88 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G +A +L + ++ +G+E R+ + +++L Y + LL+ FP Sbjct: 89 GERLLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDEL-YPEETLGGLLEEFSGLFPA 147 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + V ++ A++ I +L + + +G + APDHPLA Sbjct: 148 VELELLFPLMEDVSRLVLEGGADLGIMWRQEVLP-PALGFHALGWVPMQLVCAPDHPLAG 206 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + I +L+ Y +MV T +++ L + V + G F+ Sbjct: 207 -GQRIDWEELKRYRQLMVA--TRTDSEEKMRLRVASDVWWVESQWVIVELVKRRLGWAFV 263 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRM---LLATQHSATGQVTQWIKKQFA 293 P ++V + + LV+ + QD + L+ + G+ +W++ + Sbjct: 264 PWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRIC 315 >UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=C7CM24_METED Length = 307 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 6/292 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSIELTES 64 T + L F T GSF+ A L TS +SYTI +E L + LF R TR +LTE Sbjct: 8 TLDQLRVFLTVVETGSFAAAGRRLNRATSVVSYTIANLELQLGLSLFDREATRRPQLTEG 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +A + + A++ ++ + G+EA + ++ +L L + FPT Sbjct: 68 GRAVLAEARTVAHGIDALRAKVSGLLGGLEAELGF-VSSVLMPGARLVDALTAFQAAFPT 126 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + E + + +A++ I D ++ +G + AP+HPLA Sbjct: 127 VSLRLNVEALGAAQQFVTDGRADLGITVELWTRDSDPLELISVGEVEMLPVAAPNHPLAG 186 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + R + +++ D + +++ + + + + D +TK + G G G + Sbjct: 187 ADGLVPGAA-REHVQLVITDRS-PLSQDQEFGVVASRTWRLSDLSTKHTLLLAGIGWGSM 244 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQD--SRMLLATQHSATGQVTQWIKKQFAP 294 P +MV + LV + R+ ++ G +W+ ++ Sbjct: 245 PAHMVEADIAAGRLVELSLPEVRRRRLPLTVIYRTDHPPGPAGRWLIRRLVE 296 >UniRef50_B7VQ88 Hypothetical transcriptional regulator n=7 Tax=Gammaproteobacteria RepID=B7VQ88_VIBSL Length = 288 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 11/293 (3%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 F A GSFS +A LG SA+S I +E +V LF RSTR LT++G F++ Sbjct: 1 MFVYAVELGSFSASARHLGKVQSAVSQGISNLEIDFNVELFDRSTRKPSLTKAGEQLFKQ 60 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 ++ + + + G E ++I ++ L P +++L +QFP ++ + Sbjct: 61 VKAIVLQVEDLNVTVSAMGSGEEGLIKIALDDSLLVPN-LSKILSQFSQQFPATEVELVA 119 Query: 132 EVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAE 191 V II +A+I + + D G + IG + + P H LA Sbjct: 120 CTTTEVNPLIIEERADIGLMFTNLAFDVGS-EPCFIGHLPFIAVCHPSHSLAKTG-VAKL 177 Query: 192 SQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI-LGEGIGFLPDYMVR 250 S L + +M+ + L + F + + G +LP ++V Sbjct: 178 SDLLPHRQLMLR--GDKGKVMDQFPLIAGKVWWSNSFIVIKEMVLGSDIGWAYLPKHLVE 235 Query: 251 EAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 E + + LV + H L+ ++ + G W+++ G+L Sbjct: 236 EELNKQRLVEINVSFDHKTWSPPVDLVLSKTRSKGPALLWLEQAL--KGLLDE 286 >UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=Q2SQE2_HAHCH Length = 298 Score = 228 bits (582), Expect = 2e-58, Method: Composition-based stats. Identities = 62/293 (21%), Positives = 117/293 (39%), Gaps = 9/293 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E G F++AAE + + S + + + ++E L V + R LTE+G Sbjct: 5 TLEQWRMLHAVVAHGGFAQAAEVVHKSQSTVHHAVHKLEEMLGVQILQVQGRKATLTEAG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + R++ +LL ++ ++QGIEA ++I + +++Y + L +Q+P Sbjct: 65 KLLLRRSENLLQQAEQLESVASGLAQGIEAHIQIAV-EIIYPQEALYCALAEFSEQYPNT 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + V +G D + ++ I T G I I + P+HPL + Sbjct: 124 RIEIIETVLSGAEDLLKQGVCDLVI----TPFVPQGFIGDLITNIPFTPVANPEHPLHQL 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + + L + I++ D+ + + GW L ++ V +T G G +LP Sbjct: 180 NRTLNKEDLARHRQIVIRDSG-AVRRNSGW-LGAEQRWTVTHMSTSVNMVKRGLGFTWLP 237 Query: 246 DYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 V + L + R+ L+ G T ++ Q G Sbjct: 238 VSWVDADIQSGALKALPLQEGGDREVPLYLVYGDMDRQGPATLYLGNQLLRRG 290 >UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI0001907E1C Length = 300 Score = 228 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 123/299 (41%), Gaps = 10/299 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + E L AF A G S A LG SA+S +I E L +LF ++ R E Sbjct: 1 MRDV-SLERLRAFVAVAEQGGLSAAGRFLGKAQSAVSESIAATEGQLGYLLFRKTGRRTE 59 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT+ G +A L A K + + +EA + ++ ++ T + TA ++ ++ Sbjct: 60 LTDHGVALLPEAKATLEAADAFKAKAVSFQGNVEAELSFAVDVMVPTSRLTA-VINRFQR 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++V +E + +NQA+ A+ + + + H Sbjct: 119 EFPYTALSVYSESLGSTLQTVWDNQASFAVIGT-LPDAPAEFYTAPLCEVPMCLVVGSAH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA EPI++ L + +++ D + + + ++ V D +K + G G Sbjct: 178 PLAQASEPISKETLCQHNQLIISDKTSRSSGRSFGVF-SEKFWRVADLGSKLEFLRAGLG 236 Query: 241 IGFLPDYMVREAMTQSLLVTR-----QIHNPRQDSRMLLATQH-SATGQVTQWIKKQFA 293 G +P+++V + L+ + + + + +A + G +W+ + Sbjct: 237 WGLMPEHLVEDDFRTGRLLRKRSEVENLPDGWMPIPLSIAYKRARPPGPAGKWMIENLR 295 >UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q1QYG6_CHRSD Length = 307 Score = 226 bits (577), Expect = 6e-58, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 122/289 (42%), Gaps = 8/289 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T G F++AAE + + S +++ + ++E L + + R + LTESG Sbjct: 5 TLAQWRMLAAVVDHGGFARAAEAVHKSPSTLNHAVHKLEEQLGIRVLEPVGRQVRLTESG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R+A LL A++ +++G+EA V + ++Q ++ P A L + +++P Sbjct: 65 AMLLRRARQLLESAEALEDVAGRLAEGLEAEVVLAVDQ-IFPPDALAHALDAVSREYPHV 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + V NG + + + +A++ + + G + + + PDHPL + Sbjct: 124 RVQLHETVLNGGIEMLYDGRADLVVSG----IAAQGFLGEPLVNVTFLAVSHPDHPLQHL 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + L + ++V D+A + GW L ++ + T G G ++P Sbjct: 180 GRELDLRDLEQHRQLVVRDSALRQSMDAGW-LKAEQRWTLSHLETSLDMLCRGLGFAWMP 238 Query: 246 DYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +R+A+ Q LV + R+ L+ G T+ + Sbjct: 239 TTRIRDALRQGTLVPLPLTVGGRREVPIQLIFRDRDRAGPATRATARSL 287 >UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X032_DESRD Length = 298 Score = 226 bits (577), Expect = 7e-58, Method: Composition-based stats. Identities = 76/295 (25%), Positives = 132/295 (44%), Gaps = 9/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ + L F TAA+ GSFS+A +L SA+S ++ +E V LF RS + +ELT Sbjct: 4 YSLDQLECFVTAAKAGSFSEAGRQLNKAQSAVSTSVANLEIDFGVPLFDRSGKYLELTSE 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G R+A +L ++ R + +E RVR+ I++ L +P +L QFP Sbjct: 64 GEVLLREAETILYRCARLQNRALAFAADVETRVRVAIDEALRSP--LLEVLPEFAAQFPA 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V+ ++ V A+ A+I + T + + Y +G I + A+A HPLA Sbjct: 122 TEMDVSEGLFTDVHRAVALGHADIGL-LIGTGIPEPTVKYKLLGYIPFQAAVAAHHPLAA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +A S L I++ + ++ H + + + G G FL Sbjct: 181 KKQ-VAVSDLEDERQIIITSRGEQRHSEITPFSH--RLWVAESYASGLGMIRKGVGWAFL 237 Query: 245 PDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 P+ ++++A +V + H LL + GQ QW+ + FA G Sbjct: 238 PEPVLQDATGDGSIVALSLELEHRVHTSPLYLLWKRDDVVGQAGQWLFEMFAEMG 292 >UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=Gammaproteobacteria RepID=A4VMY3_PSEU5 Length = 435 Score = 226 bits (576), Expect = 8e-58, Method: Composition-based stats. Identities = 67/287 (23%), Positives = 120/287 (41%), Gaps = 8/287 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + G F++AAE L + S++SYT+ RM+ L V L R LTE+G Sbjct: 140 TLDQWRTLQAVIDHGGFAQAAEALHRSQSSVSYTVARMQEQLGVPLLRIDGRKAVLTEAG 199 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R++ L+ ++ + QG EA VR+ ++ + K R L + C Sbjct: 200 EVLLRRSRQLVTQASQLEELAHHMEQGWEAEVRLVVDAAYPSAKLI-RALSDFMPKSRGC 258 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + EV +GV + + + A++AI LD G +E+ + + DH L + Sbjct: 259 RVRLREEVLSGVEEVLKDGTADLAISG----LDITGYLGSELSTVEFVAVAHADHALHQL 314 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 ++ L+ I+V DT + GW L ++ V T G G +LP Sbjct: 315 GRKLSVQDLQSQMQIVVRDTGLRQPRDAGW-LGAEQRWTVGSLATSVAFVSSGLGFAWLP 373 Query: 246 DYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKK 290 +++ + + LL + + R+ L G T+ + + Sbjct: 374 RHLIGRELAEGLLKPLPLVQGSIRRPLFYLYTNHDKPLGPATRILIE 420 >UniRef50_A4A494 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A4A494_9GAMM Length = 310 Score = 226 bits (576), Expect = 9e-58, Method: Composition-based stats. Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 4/294 (1%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T + L A R GSF+KAAEEL TSA+SYT++++E L V LF R R LT Sbjct: 14 SPITLDALQALDAIDRRGSFAKAAEELEKATSALSYTVQKLEEQLGVTLFQRQGRRSVLT 73 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 SGR + +L + ++ ++ G E R+R+ + + L L ++ Sbjct: 74 PSGRLLLEEGRKILVATTYLADQVKELATGWEPRLRLGLESTTEREPFF-QALGTLLEEQ 132 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I + V NG W+A+ + ++ +GA + G I A HPL Sbjct: 133 PNLEIDIQECVLNGGWEALETDSIDLLMGATSPIPLQKGFRALPIPPADMLLVAAASHPL 192 Query: 183 AFVPEP--IAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 A QL + ++ DTA + L G +++ V K Q Q+ G G Sbjct: 193 APKANDAQTVARQLPYHRRVVTHDTAKHNVMRNAGLTTGTQALYVQTMEQKVQAQLAGLG 252 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFA 293 +G LP +++ + LV P + +A + S G+ + + + + Sbjct: 253 VGHLPRKLIQGHLDSGALVKLTTDEPTTEILDRFIAWKISNKGKALKRLTQLLS 306 >UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A6UK87_SINMW Length = 306 Score = 225 bits (575), Expect = 1e-57, Method: Composition-based stats. Identities = 66/306 (21%), Positives = 118/306 (38%), Gaps = 12/306 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + + F A GSF AA L SA+S+ + +E L V LF RS Sbjct: 1 MLDALTLDQMRIFVAIAEAGSFRAAASRLSRVQSAVSHAVANLEAELGVSLFDRSGHRPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR A +L ++ R + +G+E + I ++ + P L+ + + Sbjct: 61 LTPAGRSLLSDARAILLKTDTMRARARGLGEGVELGLTIALDPQ-FPPVLACAALKEMHR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P+ I V T A+ + +AI D L I+ + ++ A +A H Sbjct: 120 AYPSVAIRVLTASLGEAVHALRERRCALAISGID--LPDPHIERRALALVQRAAVVAASH 177 Query: 181 P---LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P LA P+ + L + ++ ED + + + + + + V D TK + Sbjct: 178 PLGILAAAGGPVTATDLADHVQVVAEDPS-PLTQGRDFNVLSPGTWRVGDNVTKHALILA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN--PRQDSR---MLLATQHSATGQVTQWIKKQF 292 G G G LP ++V + + +V P+ ++ L+ G + Sbjct: 237 GIGWGNLPLWLVERDLAEGRVVRVPAAEFGPKGETMANAYLMHRSDEHLGPAARAFCDAL 296 Query: 293 APNGIL 298 Sbjct: 297 LRMAGH 302 >UniRef50_C8Q1Z8 Transcriptional regulator, LysR family n=1 Tax=Pantoea sp. At-9b RepID=C8Q1Z8_9ENTR Length = 296 Score = 225 bits (574), Expect = 2e-57, Method: Composition-based stats. Identities = 71/294 (24%), Positives = 118/294 (40%), Gaps = 11/294 (3%) Query: 11 LAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFR 70 + F AR GSFS AA + + S+++ + +E +V LF RS R I LT G Sbjct: 1 MTFEQVARSGSFSAAARVMKRSQSSVNMAMSNLEDEFNVSLFVRSPRQISLTPEGNTLRE 60 Query: 71 KATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVT 130 +L A+++R+ + EA V + I T A +L FP I V Sbjct: 61 YVKTVLEQCNALEQRVSAFNIATEAHVSLAIEVPYTT---VAAVLYEFAMHFPDVDIHVR 117 Query: 131 TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIA 190 V + N+ ++ I +D I++ ++G + ++ HPLA P++ Sbjct: 118 EPFQGDVEAMVRKNEVDVGISMAR-PVDSDTIEFAQLGKLIMVHVVSSQHPLAQ-RLPVS 175 Query: 191 ESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVR 250 + L + +I + TI+ L + V +N I G G LP V+ Sbjct: 176 FADLHRWRHITFGEQQKTIS--TTEYLGSPMTWRVESYNAMIDAAIAGLGWASLPRIFVQ 233 Query: 251 EAMTQSLLVT-RQIHNPRQDSRM---LLATQHSATGQVTQWIKKQFAPNGILTG 300 + Q +L RQ P D + LL ++ G+ W+ + N I Sbjct: 234 RELEQGVLTELRQQEYPHTDWIVGVDLLWSRKKKPGRALSWLIDRLIKNKIFER 287 >UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria RepID=B9JQG7_AGRRK Length = 305 Score = 225 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 127/296 (42%), Gaps = 5/296 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E L +VL RS + T++ Sbjct: 4 FTLHDLQCFDAVVRSGGFQPAAAMLHRSHPAVFAAVAKLERQLGLVLLDRSGYRVRATDA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E + + I L P+ LL Q P Sbjct: 64 GLSFHRRAQSLLRELEGLRAHAAQLSMGEETDIHVVIGDLCPRPEVLG-LLGRFFAQCPG 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E G W+ +I+ +A++ + + ++ ++ + + +AP Sbjct: 123 TRLHLHFEAVGGPWERLIDGEADLILHWVEK--SDSRAEWVDLCNVPFIPVVAPGFLPKR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +PI Q+ + ++ DTA ++ +++ G +VPD K + + G G G + Sbjct: 181 IKQPITPDQMHTFTQCVIRDTARHSPQQDYFMIEGAPQCMVPDQGMKKEIILQGLGWGHM 240 Query: 245 PDYMVREAMTQSLLVTRQ-IHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPNGIL 298 P +++ E + L + H P + +++A + G ++ + + Sbjct: 241 PGFLIEEELRDGRLQSIAGRHLPGRTEELVVARRRDQPQGPISNRLWAYIQREAPI 296 >UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CU34_VARPS Length = 341 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 107/269 (39%), Gaps = 8/269 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M I T + F A GSF A L SA+S+ I +E L V LF RS Sbjct: 1 MLDILTLSQMQMFVAVADAGSFRAGAARLHRVQSAVSHAIANLEEQLQVRLFDRSGHKPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G+ +L+ A++ R + QGIE + + ++ L + P A L+ + Sbjct: 61 LTPTGKALLGDVRVILSKVEALRSRAQGLEQGIELGLAVAVDTL-FPPNLLASALRGMHA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P+ I V G DA+ + + ++AI A I + + AP H Sbjct: 120 VYPSIAIRVEYSSMGGTVDALNSGRCDLAIAAFGHA--DEKISREFLMQLHTVAVAAPSH 177 Query: 181 PLA----FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 LA ++ + I+VED + T+++ + + V D K Sbjct: 178 ALAVHAGRRGAGGLDAAAAEHVQIVVEDPS-TLSQGYDIDVLSPSTWRVTDMYIKLALLR 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHN 265 G G G +P ++V + LV + Sbjct: 237 AGLGWGKMPSWLVAGDLAAGTLVQLPVSR 265 >UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=Shewanella RepID=A9KVN3_SHEB9 Length = 300 Score = 223 bits (570), Expect = 4e-57, Method: Composition-based stats. Identities = 75/294 (25%), Positives = 131/294 (44%), Gaps = 6/294 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + LL F T A GS A+++L T AIS +IK++E+ LD++LF R + +TE Sbjct: 1 MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +LN+ +K+ +++G EA + + + + +L++ + +FP Sbjct: 61 GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAF-EASFNLARILPILELTQNEFPY 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPD-TLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 QI + E G +A+ ++A I I A + ++ + + AP L Sbjct: 120 TQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAP-RMLE 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P +L I+++DT + GQ V DF TK G G G Sbjct: 179 RHPTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGK 238 Query: 244 LPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 LP YM+ +++ Q +L+ + N Q ++ HS G V Q + ++ Sbjct: 239 LPHYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIA 292 >UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=Proteobacteria RepID=Q2G7U4_NOVAD Length = 309 Score = 223 bits (570), Expect = 5e-57, Method: Composition-based stats. Identities = 66/294 (22%), Positives = 128/294 (43%), Gaps = 11/294 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST-RSIELTES 64 T + L F GSF+ AA +LG SA+SY I +E L V LF R R L+++ Sbjct: 7 TLDQLRLFLAVVDEGSFNGAARKLGRAISAVSYGITTLEAQLGVTLFEREGSRKPVLSDA 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +A + +D A+ + + +QG+E+ + + ++ +++ A +L+ ++ FPT Sbjct: 67 GKAMLAQARAVSDDVDALVAGVRSFNQGLESELGLALD-VMFPTHLVAEVLREFQQVFPT 125 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + E + ++ +A + IG P+ L+ ++ IG++ AP H LA Sbjct: 126 VQLRLHVEALGAIAALVVEGEAELGIGGPE-LVALPELERVAIGSVELIPVAAPSHALAR 184 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + E I + R + +++ D + + + + + + + D + G G G + Sbjct: 185 M-ETIPPGEARKHRQLVLTDRSRLTDGR-DFSVVAASTWRLGDLGARHALMREGIGWGNM 242 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRML----LATQHSATGQVTQWIKKQFAP 294 P ++V + LV I P L + G W+ Sbjct: 243 PRHLVDADIASGRLVRLAI--PEAPGMAYTFHALWRRDCPVGPARAWMLDALRA 294 >UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=Oceanospirillales RepID=Q0VTN2_ALCBS Length = 312 Score = 223 bits (569), Expect = 6e-57, Method: Composition-based stats. Identities = 68/301 (22%), Positives = 129/301 (42%), Gaps = 10/301 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + A G ++ AAE L + SAISY ++++ET L V FT R + Sbjct: 1 MSAKITLDQWQALLAVVDEGGYASAAEALNKSQSAISYAVQKIETELGVRAFTLEGRRAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +R+A L+ + ++ +SQG E VR+ + L + L + Sbjct: 61 LTETGQMLYRQAKVLVEEANRLESAAIQLSQGWEPLVRVTADGL-FPQHCMLSALDAFAQ 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + + +G +A++ +A++ +G G + +R+ A DH Sbjct: 120 HSPLTRVEYSETILSGSDEALLRKEADVVVGGR----VPPGFFGDPLMRVRFLAVAAADH 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA E + LR + I+V D+ + GW L ++ V +T+ G G Sbjct: 176 PLAQAKE-LTHEDLRHHRQIVVRDSG-SRRIDSGW-LGAEQRWTVSHASTRMAAIRRGLG 232 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 ++P+ + + + L + R L+ GQ +++ ++ L Sbjct: 233 FAWVPESEMGDGLETGALKVLALDEGVERMMDLYLIYADGQYAGQAARYLGERIRDAAAL 292 Query: 299 T 299 Sbjct: 293 P 293 >UniRef50_Q2S7W3 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7W3_HAHCH Length = 304 Score = 223 bits (568), Expect = 8e-57, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 112/293 (38%), Gaps = 6/293 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L F G F AA++ + SAIS TI+ +E + LF R +LTE Sbjct: 1 MTREQLRIFAAVVSEGGFRAAAKKFYRSQSAISKTIRALEEEIGFQLFQRDRYRPKLTEK 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F K +LL F + ++ G E +R+ +N + K L+ ++ Sbjct: 61 GEAFSGKVNELLLKFSDLDSYTRELAMGYEPVIRVAVNHICPLEKVLPS-LRECAARYAN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ E G + NQA+IAI + + ++ + I PD+ Sbjct: 120 TQVDFYIETLEGAMQRLQENQADIAITYQERV--HASLEASPFSQIVLKVVATPDYLANL 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + E L I+VED+A + L+ V D N K + + G G G L Sbjct: 178 LRCDNGEPDLCRSTQIVVEDSAIKRLDERYLLVDNGGKWAVNDHNLKKRMILAGLGWGRL 237 Query: 245 PDYMVREAMTQSLLVT---RQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 P + +RE + Q L+ + +L G +++ + Sbjct: 238 PLHEIREELAQGELLPMPHIPCDATEKVDLYVLRKLEKPHGPAVRFLWESLTR 290 >UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EV09_SORC5 Length = 311 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 14/304 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+AF A G+FS A+ L + A+S ++ +E L + LF R LT++ Sbjct: 1 MTYDQLVAFLAVAGEGTFSAASARLHKSQPAVSKLVRNLERELGIELFDRREYRATLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A ++ A++ +S +E VR+ ++ + + + L+ + P Sbjct: 61 GRLFHERAAAVIEGTEALRSFGMRLSGKVEPIVRLAVDAVTPLGP-IMDIFRGLQARHPL 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + TE G DA+ ++A++A+ A +DG ++ +R DHPLA Sbjct: 120 VRIELGTERLAGTADALREDRADLAV-ATKLGIDGSAVEAARFCDVRVIPVARFDHPLAT 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 PI + LR + I++ D+A +L G V D K + + G G G L Sbjct: 179 SGAPIPPALLRAHAQIILRDSARASASPSLNVLEGGLRWTVTDVAAKKEVILAGMGWGGL 238 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQD 304 P+++ A+ LV Q+ D+ L + P+G++ + Sbjct: 239 PEHVAAGALAAGELVALQVPEFEADTMELFVIRRRD------------RPHGVVAQALWE 286 Query: 305 LLHR 308 L R Sbjct: 287 ALGR 290 >UniRef50_B7KW28 Transcriptional regulator, LysR family n=6 Tax=cellular organisms RepID=B7KW28_METC4 Length = 296 Score = 222 bits (565), Expect = 2e-56, Method: Composition-based stats. Identities = 67/299 (22%), Positives = 113/299 (37%), Gaps = 7/299 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + L F A GSFS A +LG S IS ++ +E+ + LF RS+R Sbjct: 1 MLDQLTLDQLRTFVAAVDTGSFSAAGRKLGRAQSLISQSLANLESQSGIKLFDRSSRYPI 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR A + K ++ G+E V I ++ L TA ++ + Sbjct: 61 LTEAGRVLLAHAPATVAAAETFKSHAKDLAGGLEPEVSIVLDVLFPIQVLTAAVV-AFQP 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FP + V E V +++ + A+ LL + + + +P H Sbjct: 120 AFPRTPLRVQVETLGAVIAPVLDGRCAFAVAGATPLLP-PELAREPLCQVELVMVASPAH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PL I + L + +++ D + + K + + + + D K G G Sbjct: 179 PLGRRTGTIPTADLAEHVQLVLTDRSE-LTKGREFGVFSPRTWRLADLGAKHAFLRSGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ----HSATGQVTQWIKKQFAPN 295 G +P +V + + LLV I + L G +W+ Q A Sbjct: 238 WGGMPLDVVADDLASGLLVRLDIAAVPKGGLFLPMWAVYPIERPPGPAGRWLITQLASP 296 >UniRef50_Q5ZZF5 Transcriptional regulator, LysR family n=5 Tax=Legionella pneumophila RepID=Q5ZZF5_LEGPH Length = 302 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 132/294 (44%), Gaps = 8/294 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F T G F A E++ + AI+ IK++E+ L LF R +LT Sbjct: 1 MINFSQIQVFITIVESGGFIAAGEKMHRSQPAITNAIKKLESSLGFELFDRKVYRPQLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F++KA +++ F ++ +T+ G+E + I ++ L P + A L+Q +Q+P Sbjct: 61 KGKAFYQKAREVVAQFMQLENSAETLRSGVETQFSIDLDIALPLPGY-APLIQSFIRQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +++ + + + + ++ I A + + I+Y + +IR + D+ Sbjct: 120 ETCFSLSNNTFVRCLERLERRECHLCIAA--SHIRSPQIEYLRMPSIRMIPVASRDYYDQ 177 Query: 184 FVPEPIAESQLRLYP-NIMVEDTAHTINK-KVGWLLHGQESILVPDFNTKCQCQILGEGI 241 E I +L +Y IM+ T + + K+ L H LV D + Q + G GI Sbjct: 178 H-KERINNPKLGIYCMQIMIAGTQQELYQLKIEPLSHSMPKWLVGDMYIRKQLILSGMGI 236 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ--HSATGQVTQWIKKQFA 293 G LPD++V + + + LV + + + A + + G V+ + + Sbjct: 237 GRLPDHLVEKELAEGSLVQLNTRDYVAVTMDIYAMRLNNQEHGMVSNYAWQSLK 290 >UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=Burkholderiaceae RepID=B2JTV0_BURP8 Length = 321 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 69/280 (24%), Positives = 110/280 (39%), Gaps = 3/280 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T L AF GSFS AA EL SAIS+ I +E+ DVVLF R+ R Sbjct: 1 MLDNVTINQLRAFVAVCDQGSFSGAARELRRAQSAISHAISALESAFDVVLFERNARKAT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR A +++ +K R I++ V I ++ ++ H L+ L+ Sbjct: 61 LTAAGRSLLADARGVISRTEEMKMRAVAIAEAGVPHVSIAVDS-YFSRAHLIECLRTLQA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG-IDYTEIGAIRWAFAIAPD 179 FPT I + G ++ +A+ D G I+ + + A Sbjct: 120 DFPTAAINLRMTTMQGGERLVLEGTCALAVTITDVPELSPGTIERHHLCDAQMVTVCATS 179 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + PIA + + ++V D +K + + V D K G Sbjct: 180 HPLAAIVGPIAREEFGRHIQLVVTDN-QPHAEKTQQGVVSERQWWVNDLGAKHDLLRGGL 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 G +P ++V + + LV + + +Q Sbjct: 239 CWGHMPHHLVAQDLANGTLVELKRRAWHMRPLTFMISQRR 278 >UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C8SS95_9RHIZ Length = 324 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 65/295 (22%), Positives = 126/295 (42%), Gaps = 5/295 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E LD+VL RS + TE+ Sbjct: 4 FTLHDLQCFDAVIRTGGFQPAAALLHRSHPAVFAAVAKLERQLDLVLLDRSGYRVRPTEA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E+ + + I L P+ +L Q P Sbjct: 64 GLSFHRRAQALLRELEGLRVHAAQLSMGEESEIHVVIGDLCPRPQVLG-MLGRFFAQCPG 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E G W+ + +++A++ + D +++ ++ + + +AP Sbjct: 123 TRLHLHFEAVGGPWERLFDDEADLILHWVDKG--DARVEWVDLCKVPFIPVVAPGFLPQR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + EPI Q++ ++ D+A ++ L+ G LV D K + + G G G L Sbjct: 181 IQEPITPDQMQALTQCVMRDSARHSPQQNYSLIEGAPQCLVADQGMKKEIILQGLGWGHL 240 Query: 245 PDYMVREAMTQSLLVTRQ-IHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPNGI 297 P +++ + + L + H P + +++A + G V + Sbjct: 241 PRFLIEDELHDGRLCSIAGRHMPGRTDELVVARRRDRPHGPVANRLWDHIQQEAP 295 >UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVS7_METML Length = 294 Score = 221 bits (563), Expect = 3e-56, Method: Composition-based stats. Identities = 60/290 (20%), Positives = 123/290 (42%), Gaps = 8/290 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E + GS+++AAE+L + SA++Y ++++E+ L + F R LT + Sbjct: 4 ISLEQWRSLIAVVETGSYAQAAEKLYKSQSAVTYAVQKIESLLALKAFEIQGRKAVLTPT 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +R+A L+N+ ++ + +S G EA + I ++L+ + L ++ P Sbjct: 64 GQMLYRRALALVNEANDLEAAANRLSAGWEAVIHIAA-EILFPTRLLLNCLNQFGQESPH 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + V G DA+ +A++AI + G EI I+ DHPL Sbjct: 123 TRVELIESVLGGTSDALYKGEADLAI----SPNIPSGFLGDEIMTIQLIAVAQCDHPLHQ 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + L+ + +I+V D+ +K + + V + T + +G G +L Sbjct: 179 LNRVLTYRDLQSHRHIVVRDSGAKRDKSTA-TIEVNQRWTVSNIATSIEALTMGFGFAWL 237 Query: 245 PDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQF 292 P + E + L + R L+ + G + + + Sbjct: 238 PASHINEQLQSGQLKALPLREGGIRIIPLYLIYARPDLAGPGVRRLAEIL 287 >UniRef50_C5BEG7 Transcriptional regulator, LysR family protein n=2 Tax=Edwardsiella RepID=C5BEG7_EDWI9 Length = 300 Score = 220 bits (562), Expect = 3e-56, Method: Composition-based stats. Identities = 73/306 (23%), Positives = 127/306 (41%), Gaps = 14/306 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E LL R GSF+ AA+ L T +A+SY ++++E+ L++ L RS T S Sbjct: 3 INLEVLLILDALDRHGSFAAAAQSLYKTPAALSYMVQKLESNLNLQLLDRSGHRARFTRS 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR K LL++ ++ + + G E + I + + P ++ + P Sbjct: 63 GRIILEKGRRLLSEAQELELQATLLESGWEMEIFIALEGYI-LPHTLDPVIGAFIQAHPH 121 Query: 125 CQITV--TTEVYNGVWDAIINNQ----ANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 ++ + T +NG + + A+I IG L + Y +G I A+ P Sbjct: 122 TRLHLMPHTPTHNG-----QSGEPGVMADIIIGTAPLLPENSDYTYQSLGYIDTLLAMTP 176 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 DHPL+ P+ QL I++ D VG + I+V D + + G Sbjct: 177 DHPLSRSGHPLTPDQLGEQRTIVMGDRLAVSPATVG--QETPQHIVVYDPAYQISLLLSG 234 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 GIG+LP + +R +TQ L + + +H+ G QW ++ + Sbjct: 235 AGIGYLPRHAIRPYLTQRRLSAPPLTFTPAHEAAYVGWRHTKAGHAAQWWREHLLNGDLH 294 Query: 299 TGIYQD 304 ++ D Sbjct: 295 PALFGD 300 >UniRef50_Q1D4Y5 Transcriptional regulator, LysR family n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1D4Y5_MYXXD Length = 311 Score = 220 bits (560), Expect = 6e-56, Method: Composition-based stats. Identities = 71/299 (23%), Positives = 122/299 (40%), Gaps = 9/299 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + L A GSFS AA +LG A+S ++R+E L + LF RS R Sbjct: 1 MLESVTIDQLRTLRAVAEEGSFSAAARKLGQGQPAVSQAMQRLEKQLGLRLFDRSGRVPR 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G A L D + + + + G E ++ + ++ + T ++ L + Sbjct: 61 LTAKGEAVVAAAQRLHEDIASFQAVVGRLKSGEETKLALVVDAMFPTDALL-DFVRELAR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + E+ + V + + +A + I D LD G++ I ++ AP H Sbjct: 120 THPGVELALEVELLSAVTERVRERRATLGIAGAD--LDLTGLEQRPIALLKMIPVAAPSH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL-LHGQESILVPDFNTKCQCQILGE 239 PLA V + E+ L I++ + + G V D TK + G Sbjct: 178 PLAAVKGVLTEAHLASAIQIVLSERLPEGKTGTADRGVIGSRLWRVADLMTKHSLLVGGI 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH-----NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G G P+++VR+ + LV ++ P Q L+ + + G V W + Sbjct: 238 GWGLEPEHLVRDDLAAGRLVALRLAAWEGGPPPQRPLALVRRKGTPLGPVATWASNRLT 296 >UniRef50_Q7ME88 Transcriptional regulator n=60 Tax=Vibrionales RepID=Q7ME88_VIBVY Length = 304 Score = 218 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 120/297 (40%), Gaps = 8/297 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S T E L R GSF+ AA EL S++SY I+++E LD+++F RS Sbjct: 10 VQSPITLEALHILDAIDRRGSFASAANELDRAPSSLSYQIQKLEQDLDIMIFDRSGHKAN 69 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKH--TARLLQVL 118 T++GR + +L + ++ G E + I + ++ L + Sbjct: 70 FTDAGRLILERGRTILAATEKLVNDATLLANGWELDISIAYDGIISIHHFFSLVDALGNV 129 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 K ++ + E+ G W+++ + +A++ + P + + IG + + AP Sbjct: 130 SK----TRVRLQEEILAGCWESLQSGRADL-LVCPKLEVLPHDVKADTIGKMSMTWVAAP 184 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 +H + ++ Y I + DTA ++ Q + V + K + G Sbjct: 185 NHYVHKRSGEFNDTAREKYRIIAIADTAREQPAITVNIIQKQPRLTVTNLQAKVDALVTG 244 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 GIG LP + + L + +Q ++LA + + G+ W + N Sbjct: 245 LGIGTLPTDIATPLIEAGKLKEIE-GAEQQHLEIILAWKRNQMGEAKSWCIQYLKKN 300 >UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S803_CHRVI Length = 305 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 8/285 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E GSF AAE L T S++SY +KR++ L V + R LTESG Sbjct: 9 TLEQWALLDALDERGSFEAAAESLNRTQSSVSYGLKRLQEQLPVTVLEPQGRRTVLTESG 68 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R ++A LL++F ++R T+ QG E VR+ + ++ L +Q P Sbjct: 69 RLLLQRARVLLHEFKRLERLAATLGQGWETTVRLAVEIVMPLEPLL-EALARFTEQAPQT 127 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 Q+ + V +G +A++ +Q ++AI T L G + + + DHPL + Sbjct: 128 QVQLVETVLSGTGEALVRHQVDLAI----TGLIPPGFIGDPLLRVDFVAVARHDHPLHRL 183 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + LR + +++ DT H GW L +E V T G ++P Sbjct: 184 GRVLTLDDLRAHRQVVIRDTGHWRPVDSGW-LEAEERWTVSHLRTAIALIERGLAFAWIP 242 Query: 246 DYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWI 288 + +R + + L + R ++ L+ +A G T+ + Sbjct: 243 ESSIRAELARGELRPLPLESGGHRPETLYLVLADPTAAGPATRAL 287 >UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida W619 RepID=B1JAA5_PSEPW Length = 296 Score = 218 bits (555), Expect = 3e-55, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 9/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E L AF+ SFS AA +LG + SA+S ++ +E L + LF RS R +LT Sbjct: 3 LSLEQLAAFSAVVSERSFSAAARKLGKSQSAVSISVGNLEIDLGITLFDRSQRYPQLTNE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR R A +L ++ R +++Q +E + I I++ + A +L+ ++FP Sbjct: 63 GRALLRDAEAILGQCCNMESRASSLAQALETELVISIDEAIPYQS-LAPVLEEFSRRFPH 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +TV V I + + +A+ T + + +G+I ++ + HPL Sbjct: 122 VDLTVLHPCGQDVLTMIEDKKLLLAMMCTRTHYP-RNLQFIRLGSITFSNVVGRQHPLVA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 +P ++ +QL Y ++ L+ V + T G G + Sbjct: 181 MPT-VSFNQLSNYRQLIY--LPFQDRLPTSEYLNSPNHWRVESYLTLMGMLRAGMGWATV 237 Query: 245 PDYMVREAMTQSLLVTRQIHN----PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 P +++ V Q+ L+ + G+ W+++ Sbjct: 238 PRQLIQALGPNGEFVELQLEAYPYTDWTVGVDLVWSSGLRLGKAGTWLREALGR 291 >UniRef50_A6VRP1 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VRP1_MARMS Length = 315 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 127/300 (42%), Gaps = 11/300 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + S+ + L AF GSF AA+ + T IS +K +E + LF R++ Sbjct: 8 VESVMKLDQLRAFIAVVETGSFRSAADSIHKTQPGISAAVKALEEQYGISLFDRNSYRPT 67 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G FF ++ L++ ++ ++QG EA +++C++Q+ R ++ ++ Sbjct: 68 LTAEGHAFFLQSKKLMSQVLQLENLGHDLAQGTEAPLQLCLSQMALDDNCMMR-IKAFQQ 126 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q + +TT+ GV + + ++ IAIG L D + EI I ++P+ Sbjct: 127 QHADVTLDITTDHLYGVQEKLAKDKCEIAIGPRYGLDDRHA--FIEINKITMITVMSPE- 183 Query: 181 PLAFV---PEPIAESQLRLYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 LA V I + QL P I+V +T A+T ++L + V DF K + Sbjct: 184 LLATVNTSDTKIKQQQLYSIPQILVTNTAANTSGNGHRYVLPTGKRWYVNDFQIKKNLLL 243 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWIKKQFA 293 G G +P + ++ + L+ ++ N ++ +H + Sbjct: 244 HGFGWARMPKHYIQSELDNKQLIPIEVENFTSQNQLPIFMIRLRHQTQSYQANLFWEMMR 303 >UniRef50_Q161W6 Transcriptional regulator, LysR family n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q161W6_ROSDO Length = 298 Score = 217 bits (554), Expect = 3e-55, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 129/300 (43%), Gaps = 11/300 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + L GSF+ AA + SA+S+ I+ +E LDVVLF R+ R Sbjct: 1 MLDNVTLDQLRMLVAIDETGSFTAAAARVQRAQSAVSHAIRTLEADLDVVLFDRTGRKPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 T +G +A +L+ +K R IS G+E+ + + + + LL + Sbjct: 61 RTPAGDAIIAEARTILSRVDHLKARARGISAGMESEICLATSVIAPREGVL-DLLDAFRA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDG--GGIDYTEIGAIRWAFAIAP 178 +FPT + + E GV +++ +A++ + +L ++ T +G P Sbjct: 120 EFPTIGLRLFVEEIGGVPQLLMDGRADLGLLGKPSLAGAVFEPLEATAVGTSDVVAVARP 179 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 DHPLA + P+ E L + ++ T+ + + + +++ + + + + + + G Sbjct: 180 DHPLAMMDRPLTEVDLTDHRQLV--PTSRALPRYLNRMVN--DIWEIAELDMRHEMLRRG 235 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQI----HNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G +P Y+V + LVT I + + +A G T+W+ ++ Sbjct: 236 MGWGTVPTYLVERDLASGRLVTLDISARPDEVMRVPLFAAHKKDAAIGPATRWLIEKMGE 295 >UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLJ2_HAHCH Length = 293 Score = 217 bits (553), Expect = 5e-55, Method: Composition-based stats. Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 6/291 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L AF GSF AA L T S +S + +E D+ LF R T LT Sbjct: 1 MTNEQLRAFVGVVEHGSFRAAAAALFKTQSTVSAAVAALEQEFDLQLFNRETYRPTLTIE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ FR+A LL+ + ++ ++QG + I ++ + L+ K+ P Sbjct: 61 GKALFREAKALLSKAHDLEMLGHRLAQGKAPELSISLSAMCAHLPGL-DTLKAFAKKRPE 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + TE +GV + ++ +A +AIG L D ++TE+ + AP A Sbjct: 120 MRLHLHTEHLSGVLEQLLLEKAEVAIGPQVGLDDR--YEFTEVAKVTQVTVAAPGFTEAG 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++QLR P+I++ D+ ++ G V DF K + G G + Sbjct: 178 GDGVVRQAQLRNRPHILIADSGSLAPFDHVNVIPGGHRWYVNDFLMKKGLLLSGMGWARI 237 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQ---DSRMLLATQHSATGQVTQWIKKQF 292 P +MV + + L Q+ N L+ ++ + Q + Sbjct: 238 PLHMVDAELERDELRFLQVENFPSRSLVPIYLIRLRNQLLSPLAQEFWDEM 288 >UniRef50_A8H1M6 Transcriptional regulator, LysR family n=6 Tax=Gammaproteobacteria RepID=A8H1M6_SHEPA Length = 292 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 115/264 (43%), Gaps = 9/264 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E L +F T GSFS AA +LG SAIS I +E + LF RS R LT Sbjct: 1 MLTIEQLYSFVTTVETGSFSAAARKLGKVQSAISQHIINLEIDTNQTLFDRSHRYPILTR 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +A +L + ++ + + ++ + +++ + K TA LL L Q+P Sbjct: 61 AGEQLLPQAKAVLAQHQRLNLQVLALDKQDNLKLTLAVDEGIPYNKFTA-LLSSLSNQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 C++ + + + +A++ I + L +D+ +G +++ + P+HPLA Sbjct: 120 ECELELLCASSLDIIHLVDTKRADLGIVFSE-LTYSESLDFESLGTVKFELLVNPNHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL--LHGQESILVPDFNTKCQCQILGEGI 241 L+L+ +++ A K+ GW H + ++ + G G Sbjct: 179 QETSS-HIDVLKLHRQLVIGSKA----KQKGWFNTPHSPDVWHADNYYMLLELAKAGFGW 233 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN 265 LP ++ EA+ L +I Sbjct: 234 ALLPLHLCEEAIAAQQLCKLKIDF 257 >UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=B8EMI3_METSB Length = 307 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 60/294 (20%), Positives = 117/294 (39%), Gaps = 9/294 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + + L F GSFS AA L SA++Y I+++E LDV LF R+ LTE+G Sbjct: 7 SYDQLQVFLAVVDEGSFSAAARSLKRAQSAVTYAIQKLEEQLDVRLFDRAAYRPALTEAG 66 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R +A + ++ A++ D I+ G E +R+ ++ + + L+++ +FP Sbjct: 67 RALLPRARLVADEMQALRSHADAIAAGAEPELRLVVDAM-FPMDRLVEALRLVSARFPFS 125 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + + + ++N I + + + ++ I AP HPL Sbjct: 126 PPRIYVDSMGAAAELVLNGVCAIGL-LLEFSSSFEQLQRDKLIDIAMIPVAAPIHPLGGA 184 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 P++ +LR + +++ D + + ++ + + D K G G G LP Sbjct: 185 ESPVSIEELRPHVQLVLSDRSGLSGDRDYG-VYSTRTWRIADLGAKHAMLKAGLGWGSLP 243 Query: 246 DYMVREAMTQSLLVTRQI------HNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 ++V E + L QI + + G + + + Sbjct: 244 AHLVAEDLANGRLRRIQILDEAGLSEAVRLPLCSAFRRDRPPGPAGRHLLAHLS 297 >UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT2_9RHOB Length = 297 Score = 217 bits (552), Expect = 5e-55, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 118/299 (39%), Gaps = 8/299 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L GS AAE L T AIS +K +E LF RS +ELT Sbjct: 1 MKLDQLNVLRAVVETGSVKTAAERLNRTQPAISQALKALEFQTGTELFDRSGYRLELTPV 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + ++ +L + + + I +G E + I ++ +L L+ FP Sbjct: 61 GKRVYLQSLRVLTEAEDLGQLIHHFEKGQEETITIAVDATTNL-NALTPVLCKLQTGFPE 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDT-LLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV +G +A+ A IAI + +L+ G DY +G +P A Sbjct: 120 TRVVLRPEVLSGAIEAVKTGTAAIAISPMSSVMLEEEGFDYIPLGTSTLRNVTSPS-LWA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTIN--KKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + P + LR + ++ D+ + + GQ V D TK I G G Sbjct: 179 EMDNPKRLADLRRFHQVIASDSGQAGGLFDREIGVQKGQRRWYVSDLQTKKHLLIAGLGW 238 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPR--QDSRMLLATQHSATGQVTQW-IKKQFAPNGI 297 G LP++M+ E + Q L + + D + Q + + K+F + + Sbjct: 239 GRLPEHMIAEELKQGRLCEIDLPHTHLAFDVTIYAFRQSKPIVRAVAALLWKEFEAHAM 297 >UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B9YYZ1_9NEIS Length = 314 Score = 215 bits (549), Expect = 1e-54, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 7/265 (2%) Query: 1 MNSIFT-EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSI 59 MN T E G F++AA L + SA+SY + R++ L V L R + Sbjct: 1 MNFPRTSLEQWRVLQAIVEHGGFAQAASALNRSQSAVSYNVARLQEQLGVGLLEAEGRRM 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LT +G R+AT L+ ++ R + G EA VR+ ++ L T L Sbjct: 61 KLTAAGAALLREATPLIEAALRLEARARALDAGWEAEVRLAVDSLFPTDALLC-ALAGFA 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 P ++ V V +G DA+ +AI G + + AP Sbjct: 120 GHCPDTRLQVHEVVMSGADDALYAGAVELAIVTR----VPSGFMGDWLMDATFVAVAAPG 175 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPL +P+ E LR YP ++V D+ + GWL Q V +T G Sbjct: 176 HPLLAAGQPLGEDDLRRYPQVVVRDSGTRQPRDEGWLGASQ-RWTVSSPHTALDVVSAGL 234 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH 264 G+LP++ +R+ + LL + Sbjct: 235 AYGWLPEHRIRQPLAHGLLRPLPLA 259 >UniRef50_A9D356 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D356_9RHIZ Length = 306 Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 117/297 (39%), Gaps = 9/297 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T + F T GSF+ AA +LG SAI+Y + ++E V LF R+ LT Sbjct: 2 DAITLDQFTVFLTIIEEGSFAAAARKLGRAQSAITYAVHKLEDQCAVQLFDRTAYRPVLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E GR + ++ D + + ++SQGIEA + + + ++ A L +F Sbjct: 62 EQGRALLPRVRRIMEDLGEFRIQAKSMSQGIEAELVLVVETFIHL-SMVAPALSAFHVKF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P Q+ + + + + A++ + ++ + + + APDHPL Sbjct: 121 PMVQLKIISVRPQDASRQLQEHDADLGL-FMLAPKPQTDLESLLVAEMDFLAVAAPDHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A +P + +R + I+V + + + + G V + + G G G Sbjct: 180 AKLPPHFPKEAMRDHLQIVVSNP-KAPDDATIYGVVGVNQWRVSEVRLRYDLIKQGVGWG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRM-----LLATQH-SATGQVTQWIKKQFA 293 +P MV + + LV Q + M ++A A G ++ A Sbjct: 239 SMPRPMVEADLARGDLVVLQPAQWDSSNIMPRFKTVVAKHKDRALGPAGTFLMAAMA 295 >UniRef50_B6R8I7 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8I7_9RHOB Length = 297 Score = 215 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 113/293 (38%), Gaps = 7/293 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + L AF TAA GSFS AA LG SA+S I +E L+ LF RS+ ELT Sbjct: 1 MPSVDQLEAFVTAAELGSFSAAARRLGKAQSAVSAAISNLEIDLESDLFDRSSYRAELTV 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 SG A +L + + +S+G E +++ Y +L KQFP Sbjct: 61 SGVSLLDYAKSILQSRQDLLVKAGALSEGAEGSLKVVFEYGTYV-SAINEVLHDFDKQFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V T + GV+ + + A + I + G + +G R DHPLA Sbjct: 120 KVELHVQTTSFGGVFSRLADESAQLGI-IIERHPYKEGFHFRGLGFERRIAVCHKDHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + E + LR Y I + +T + G ++ + G G Sbjct: 179 ELEE-VRLVDLRGYRQI-ISETEIDRHSPEFSRQKGPHLLITDNPRVAHNMVHGGVGWAE 236 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWIKKQFA 293 LP MV + + L + L+ + + +W+ + Sbjct: 237 LPAQMVDDEVKAGELKELSYDFQQNAILNKVSLVWGKQQSQAPACKWLINRMC 289 >UniRef50_A8FU64 Transcriptional regulator, LysR family n=1 Tax=Shewanella sediminis HAW-EB3 RepID=A8FU64_SHESH Length = 283 Score = 214 bits (545), Expect = 4e-54, Method: Composition-based stats. Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 7/290 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E+L + GSF KA+E+L SA+SY++K++E+ D+ +F R T ELT Sbjct: 1 MVNLEHLQVIDSICAEGSFQKASEKLHKVRSAVSYSVKQVESYYDIQIFNRETYRPELTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR + LL + I+ I E +R+ ++ K RLL LK++FP Sbjct: 61 DGRLLIVQIRHLLKQASEFETFINEIKGESETELRLGVSSTFPLDK-ITRLLIELKQEFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + EV +G +++ + +IAI + IDY I + I+ + PL Sbjct: 120 KTTIHLEIEVASG-ERMLLDGKVDIAI--YGSPFKNKAIDYKLIDTMNVPLVISKNLPLV 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + ++E++L YP ++++ T +L V D +TK G G G Sbjct: 177 DINR-VSEAELAAYPQVIIKSTDSKSPD--TGILDEALKWYVTDLHTKKTLITQGLGWGR 233 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 LP ++V + + + L++ + + ++ A G V I F Sbjct: 234 LPQHLVEKEIENNELISLDTLGEFELPIYITKLKNKALGPVALKIWNYFK 283 >UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VGW8_DESVV Length = 306 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 68/309 (22%), Positives = 115/309 (37%), Gaps = 26/309 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E + AF AAR GSFS AA ELG SA+S I +E L V LF R+ LT Sbjct: 3 YSWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A LL R T++ G+E R+ + +++L + P R L +++P Sbjct: 63 GEALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALVDR-LTGFAERWPD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAP----------------DTLLDGGGIDYTEIG 168 ++ + + + +A++ I P D G+DY G Sbjct: 122 VEMEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAG 181 Query: 169 AIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDF 228 A+ +A HPLA ++ +L + + + + V + Sbjct: 182 AVPALPVVAAGHPLAG-RRAVSPDELEALRQLDITSRGGERPDAL-----SGQVWRVDSY 235 Query: 229 NTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIH---NPRQDSRMLLATQHSATGQVT 285 G G +LP+ + + LV + + L+ A G Sbjct: 236 WALRDLVRAGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAA 295 Query: 286 QWIKKQFAP 294 +W+ + A Sbjct: 296 RWLLEALAK 304 >UniRef50_A6FA48 Putative transcriptional regulator with periplasmic binding proteindomain (LysR family) n=1 Tax=Moritella sp. PE36 RepID=A6FA48_9GAMM Length = 301 Score = 213 bits (543), Expect = 6e-54, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 119/294 (40%), Gaps = 8/294 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + E F GSF AA+ L + S+ISY I++++ L V LF + R + Sbjct: 4 EPAVSLEQWYIFKIVVEQGSFQGAADYLIKSQSSISYAIQKLQDNLGVRLFEQQGRRAVV 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T+ G+ +A +LL +I++ S G E +++ + L+ + +L + +Q Sbjct: 64 TDMGKKMLTQANELLTQAASIEQLAGEYSAGWEPLLKV-MTTQLFPQQLLTDVLVLFAQQ 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 I +GV DA A++ I + G ++ + + + HP Sbjct: 123 CTVTSIDFQQGTLSGVTDAATYGTADLIISSQ----IPTGFTGEKLCPAQLSRFVHHQHP 178 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA + P+ ++L+ + I++ D++ + GW L Q+ V +F+ G G Sbjct: 179 LALLNRPLTLAELKSHAQIVMSDSSALRSVDAGW-LGSQQRWTVNNFHESLSLVKQGVGH 237 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQ--DSRMLLATQHSATGQVTQWIKKQFA 293 LP +++ + LV I + + S L+ G K Sbjct: 238 ATLPVSRIQDELANGELVELIIEDHVRLDLSLYLVCANKKTLGPAGLLFAKLLK 291 >UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YZZ9_LISDA Length = 292 Score = 212 bits (541), Expect = 1e-53, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 116/296 (39%), Gaps = 10/296 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E L AF AA GSFS A +L S IS + +E L+V LF R+TR +LTE Sbjct: 3 FSIEQLEAFVAAAETGSFSAGARKLNKAQSVISTAVANLELDLNVTLFDRTTRKPQLTEH 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G KA +L+ + D + QG+E+++ I + + + + L ++ +P Sbjct: 63 GHTLLVKAKRILSQCQQLVANADELQQGVESKLTIALQSMTMSQP-LTQALAKFEQDYPF 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + + + + +A I I+ IG++ +AP HPLA Sbjct: 122 VEIEILNATEDEIVSLLNSGRAQIG-ALLQLDTLPQEIEAHGIGSLAMVCIVAPSHPLAR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + I L + I++ H + + + G G + Sbjct: 181 KSQ-IDWPDLITHRQIVLSGRHHQHKRWQV----SDSIWSTESAISAVNLVMGGIGWTVV 235 Query: 245 PDYMVREAMTQSLLVTRQIHNP---RQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 P MV++ + ++L + ++ T+ G + ++ + Sbjct: 236 PLDMVKDLIAANVLTRLPLSFEGQTWHQGVDIVWTRLHPAGPAARQLRLYLTEARL 291 >UniRef50_Q39M30 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q39M30_BURS3 Length = 307 Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats. Identities = 64/294 (21%), Positives = 112/294 (38%), Gaps = 9/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L T + GSFS A LG SAIS +++ +E + LF R+ + LT Sbjct: 7 LTLDQLRVLVTISDVGSFSAAGRALGRVQSAISQSVRTLEETQGIELFDRTRQRPVLTPV 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +A +L + G+E + + I+ L+ T A L+ L FP Sbjct: 67 GRALVEQARAVLASADRFEAIAAGTKTGLEPSITVAIDPLVPTAPLIAS-LRALHDAFPD 125 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ +TE G + +N A++A+ + I Y + + A DHPL Sbjct: 126 LPVSFSTEGVGGAEQRLRDNAASLALCLLLPSIPDDLIAY-PLMDLTLVPVAAADHPLVR 184 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + P+ L + +++ D + G + G+ D + G G + Sbjct: 185 LGRPLTRYDLESHVQLVLSDAYGAEGPRHGVI--GRRIWRFVDLGRRLDFLRAGFGWCKM 242 Query: 245 PDYMVREAMTQSLLVTRQIHN----PRQDSRMLLA-TQHSATGQVTQWIKKQFA 293 P Y+V + LV + P + A + G+ W+ + Sbjct: 243 PPYIVEPYLADGSLVELDTADEALSPTGSLPIYAAHVRDRPLGRAGSWLLEDLR 296 >UniRef50_A3Y6H6 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y6H6_9GAMM Length = 294 Score = 211 bits (537), Expect = 3e-53, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 124/291 (42%), Gaps = 10/291 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN++ +L AF SF AA L T S++S + +E V L +R E Sbjct: 1 MNNV----HLQAFIAVVEQESFRGAATFLHKTQSSVSAAVSTLEEEFGVQLLSREAYRPE 56 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G+ F+++A L+ A++ +S G+ + + + + LQ+ + Sbjct: 57 LTLEGKVFYQEARQTLDKMQALETLGHQLSSGVGPTLALTFSASCVQLDGLVQ-LQMFVE 115 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + P + ++TE +GV +++ + +A+IAI L G ++ EI ++ AP Sbjct: 116 KHPEMHLNMSTEHLSGVLESLQSGKADIAISPNYGL--GQEFEFVEIAKLKLVTVAAPHF 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 + I + +L+ P +++ED+ + ++ + V D+ K + + G Sbjct: 174 LENQIQRIIPQVELKNRPQVLIEDSGSLHPIERSNVIPNGQRWTVNDYMIKQKLIVSGLA 233 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWI 288 LP +MV + + + + ++ + L+ + + + + Sbjct: 234 WSRLPYHMVEKELREGSVEMIEVEDFASSIVLPIYLIRLKSNTSAIANSFW 284 >UniRef50_Q5R026 Transcriptional regulator, LysR family n=2 Tax=Idiomarina RepID=Q5R026_IDILO Length = 292 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 70/293 (23%), Positives = 123/293 (41%), Gaps = 5/293 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L T A GS K AE+L T SA+S +K++E LF R +ELTE Sbjct: 1 MNLSHLKMMITVANLGSLQKTAEQLNRTQSAVSMALKKLEENAGFALFNRDGYRLELTEQ 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G++F R+A +++ ++ + G E + +C + + +Q +++Q+PT Sbjct: 61 GQHFLRQAEEVVRQQQRLQSLATQLKHGAEPLLTLCYDHTCDSKLWVPS-IQHIQQQYPT 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDG-GGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V E I N A++A+ L G + + I+ Sbjct: 120 TELHVDGESQMRALKRIDNGSADLALCPWLPLFRQYGDFETLPVAPFELTVVISTALMKE 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 F P + L P ++ ++ IN L Q+ I V + NT+ + + G G G Sbjct: 180 FGRMPQSRQDLLELPMLVPQNLEIGINLDAVLRLPSQQRIRVNEVNTQFELLMAGFGWGI 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRM---LLATQHSATGQVTQWIKKQFA 293 +P ++ +A+ Q LV I Q R+ L+ + + G I + FA Sbjct: 240 IPKHIALDALEQGKLVEISIPGFVQQVRLEIHLVRSANRTLGPAANAIWESFA 292 >UniRef50_B8IXI4 Transcriptional regulator, LysR family n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IXI4_METNO Length = 310 Score = 210 bits (535), Expect = 5e-53, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 14/303 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + T E F A+ GSF +AAE+LG T SAIS+ I++ME L LF R LT Sbjct: 2 TKITLEQWRMFVATAQQGSFLQAAEKLGKTQSAISHAIRKMEETLGQELFAIEGRRARLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G + +A +L+ I+R + E + I ++ +++ + R L+ +K + Sbjct: 62 TVGEMIYPRARELIGHAAQIERLCVSFDPEAEGEISIAVD-VIFPMQLLHRALEEYEKLY 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + V +G + + + +A I I G + + + DHPL Sbjct: 121 PHFSVRVWETTLSGASEILEDGRAVIGIAGQ----LPPGTVMEPLLKVSFLCVAVADHPL 176 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 + + + L+ + I++ D+ N GW L ++ V T G+G Sbjct: 177 HREGD-LTHAMLKEHRQIVLSDSGR-RNLSSGW-LGARKRWTVGHLATSVALVRAGQGYA 233 Query: 243 FLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 +LP++ + + + ++H R+ ++ L ++ Q +++ G+ Sbjct: 234 WLPEHSIGADIAAGTIRPLRLHSGGRRTVQLHLGYT-----EIGQNLRQALDLLGVFRDT 288 Query: 302 YQD 304 D Sbjct: 289 VAD 291 >UniRef50_C6D9Q6 Transcriptional regulator, LysR family n=9 Tax=Enterobacteriaceae RepID=C6D9Q6_PECCP Length = 297 Score = 209 bits (532), Expect = 1e-52, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 107/291 (36%), Gaps = 9/291 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E+LLAF T GSFS AA L + S IS I +E L + LF RS LT + Sbjct: 3 YSPESLLAFVTTVDAGSFSAAARRLHKSQSTISAAIANLEADLGLTLFDRSGHQPTLTLA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +L+ + ++ IE R+ ++ ++ H +LQ +QFP Sbjct: 63 GRKVLSHVQAILSASEDLDELAIRLADHIEPRLTFMLSD-IWQAAHYEPVLQRFAQQFPD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + V D + N+A++ I A ++ HPLA Sbjct: 122 IEFECLIAEGDDVIDLLQMNRAHVGILRAQADYPPDVAAARLQVKTEMALFVSAAHPLA- 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + SQL + + K+ L P + + G G L Sbjct: 181 AEKTVTRSQLATVRQLYL-----NTYKRSDQLQPEGIVWSAPSYLMLLEMAQQGHGWSML 235 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQ-DSRMLLATQHSATGQVTQWIKKQFAP 294 P ++V + + LV + Q ++ ++ G W+ Sbjct: 236 PRWLVAQY-DRKKLVELPVAGWPQWIDVDVVWSKPHPPGPAGLWMIDNLLA 285 >UniRef50_C4LEH9 Transcriptional regulator, LysR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LEH9_TOLAT Length = 318 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 14/303 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E F +G +++AAE+L + S++++ I +++ L V L R LT++G Sbjct: 7 TLEQWRIFQAVVEYGGYAQAAEKLNKSQSSLNHAIAKLQQTLGVALLEVRGRKAYLTDAG 66 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP-- 123 F R+A L + ++ I QG EA +R+ + ++ + + R LQ +P Sbjct: 67 DMFLRRAKLLNQNMQELELLAHNIHQGWEAEIRLAV-EIAHPRRPLNRALQNY---YPIS 122 Query: 124 -TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 + + V G + I ++ANI I L G + + + P HP+ Sbjct: 123 RGTHLQLFDSVLGGTEEFIQEHRANIVIAG----LVPKGFLGEPLSEVTFLPVCHPQHPM 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + +L + I++ DTA + GW L ++ V +F+ + + G G Sbjct: 179 ALETGLLTSEELSQHLQIVIRDTAKNPKELTGW-LKAEQRWTVTNFHEAIETILSGMGFA 237 Query: 243 FLPDYMVREAMTQSLL--VTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 ++P ++V + + L + + N R+ L+ G + + + LT Sbjct: 238 WIPQHLVEGFIQRQQLHRIRLREGNERKIFTHLIVPAPERLGPSANCLLECLRLSHPLTA 297 Query: 301 IYQ 303 Y Sbjct: 298 SYW 300 >UniRef50_B6R986 Transcriptional regulator, LysR family, putative n=2 Tax=Pseudovibrio sp. JE062 RepID=B6R986_9RHOB Length = 291 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 6/297 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++L +T GSF A+E+L SA+SY++K++E + +F RS ELT Sbjct: 1 MTNLDHLNVISTICEVGSFQLASEKLNKARSAVSYSVKQVEEFYQLQIFDRSKYRPELTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ + LL A + + + E +R+ ++ ++ LL+ L+ +FP Sbjct: 61 EGKTLLVQIRRLLEQAKAFEDSVKDLKGENEPEIRLAVSS-IFPVTWITDLLKSLRTKFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + EV +G +++ ++AI A T +DY I I+ Sbjct: 120 QTTIHLDVEVASG-ERMLLSESVDMAIFAAPT--RNASLDYKPITNKDVPLVISDVLIGE 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P + + L +P I+V+ ++ + G LL V D K G G G Sbjct: 177 AAPHSLTRASLAEHPQIVVK-SSDAQSPDTG-LLADAPKWYVTDLQAKKDLITSGLGWGR 234 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 LP +M+ + +++ +L T L + +G V I K F Sbjct: 235 LPHHMIAQELSEGVLKTLPTLGEISLPICLAKRGNHHSGPVASHIWKYFDGEQNFPA 291 >UniRef50_Q88D98 Transcriptional regulator, LysR family n=15 Tax=Pseudomonas RepID=Q88D98_PSEPK Length = 301 Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 64/295 (21%), Positives = 113/295 (38%), Gaps = 8/295 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSI 59 M + E L F A SFS A E SAIS I +ET L V LF R S R Sbjct: 6 MAEQWNLEQLRTFLRVAELRSFSAVAREQHKAQSAISSAIALLETDLGVTLFERSSGRQP 65 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LTE+G A +LL + R + +G EA +R+ ++ + L L Sbjct: 66 KLTENGSALLEDARELLRQCERLDGRALALMRGQEALLRVAQDEAMPYQPVIDS-LDELA 124 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 ++P ++ + + V ++ +A++ + + ++ +G++ A Sbjct: 125 SRYPFLEVQLASGAQGDVARKLVERRADLGLFFLHESIPAS-LERRALGSVEMVTVCAVG 183 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + QL + +++ + F + + G Sbjct: 184 HPLAGEGR-VTRQQLARHRQLLITPQQSGYPGGEAI---SPQVWRADSFYAMAELLMRGL 239 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQVTQWIKKQFA 293 G +LP ++V+ Q+ +V LA + G QW+ ++FA Sbjct: 240 GWAWLPRHVVQYPTYQAHMVELDSDWRPPALVAELAWRRDEPLGPAAQWLAERFA 294 >UniRef50_A0XZG1 Putative transcriptional regulator with periplasmic binding protein domain (LysR family) n=1 Tax=Alteromonadales bacterium TW-7 RepID=A0XZG1_9GAMM Length = 316 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 60/291 (20%), Positives = 117/291 (40%), Gaps = 8/291 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + F G F+ A+ + + S + + ++++E L + L R LTESG Sbjct: 27 TLDQWRMFKAVVEHGGFAGASAAVFKSQSTVHHAVQKLEAALQIKLLEVKGRKAFLTESG 86 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + R+A L+ + I+ +T+S+G+E+ ++I ++++ P + L + +P Sbjct: 87 KLILRRAEFLIEEANKIESVANTLSEGVESTLKIAVDEVFPQP-ILYQALAKTSELYPLL 145 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + V G + + N ++AI + + GI +++ + + +HPL Sbjct: 146 KIDLIESVLTGANELLNNAVVDLAISS----VPIYGISCSKLTDVEFIAVAHKNHPLNKF 201 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 E ++ L+ + I+V D+A N+ GW L V G +LP Sbjct: 202 EEQLSFRDLKQHRQIVVRDSATHTNQDEGW-LGADMRWTVSHLRNSIDMVSQNLGYAWLP 260 Query: 246 DYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 V + L + R + L+ G Q K Q Sbjct: 261 FDQVTHLINDHTLKVLNLEQGITRPLNLYLMCNDVDRLGPAAQEFKDQLTA 311 >UniRef50_D0HD71 Transcriptional regulator LysR family n=5 Tax=Vibrio RepID=D0HD71_VIBMI Length = 299 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 113/264 (42%), Gaps = 8/264 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ + E AF A GS KAAE+L + SAIS++I +M T L LF R Sbjct: 1 MSARISLEMWRAFIAVAEHGSTVKAAEQLHKSQSAISHSINKMATMLGQELFVIEGRQSV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE G+ KA +L ++ I++ + + I ++ LL + ++ Sbjct: 61 LTELGKQLLPKAQELHHNALQIEKLAMKFQGELAQEISIAVDVLLPA-RFVLEVIDRFHL 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P + V +G + + ++AI + GI + + A D Sbjct: 120 VYPHISLRVYETALSGASQLLNDGSVSLAIAS----ALPKGIILESLFEVDMLCVCASDF 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 LA I +++L+ + +I++ D+ + + GW + + V +T I G G Sbjct: 176 ELAQRKN-ITQAELKTFRHIVIRDSGNQ-DVDSGW-IGSHLRLTVTHPSTALSSIIDGIG 232 Query: 241 IGFLPDYMVREAMTQSLLVTRQIH 264 G+LP ++V+ + LV + Sbjct: 233 FGWLPKHLVQPYLNDGRLVLVDLE 256 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 55/310 (17%), Positives = 116/310 (37%), Gaps = 15/310 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+S F+ +L F + GSFS AA++L LT SA+S I +E L L R+TR + Sbjct: 1 MHSQFS--DLPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G ++ A LN + + R++I + + H A L+ Sbjct: 59 LTEAGERYYEYAAQALNLARQGVDAVTELQGEPRGRLKITAP-MTFGVLHVAPLISEFLS 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P ++ + E ++ + ++ I L + + R +PD+ Sbjct: 118 RYPKVEVDLQLE---DQMVDLVAGRFDLGIRI--GHLPDSNLIAKRLAPCRTVLCASPDY 172 Query: 181 PLAFVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 ++ + P + L + + + +N+ + + + + +V + + Sbjct: 173 -VSRMGSPSKPADLAQHNCLRYSYFRGGNEWLFLNQGNEYKVLPKGNFIVNNSEAIRRAL 231 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAP 294 + G GI +P +++ + + LV + + + + Sbjct: 232 LAGIGIAQMPTFIIGKELRDRKLVNLMPEYQLPQHFLYAVFPERKHMPLKVRMFIDFLNE 291 Query: 295 NGILTGIYQD 304 Y D Sbjct: 292 KLGSDAPYWD 301 >UniRef50_A3Y9W7 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9W7_9GAMM Length = 306 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 63/294 (21%), Positives = 113/294 (38%), Gaps = 15/294 (5%) Query: 1 MNSIF-----TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS 55 M +F + FT A+ SF+KAAE LG+ S +S + ++E L + L R+ Sbjct: 1 MKRLFFMSNNDLNQIRIFTHVAQLASFTKAAEVLGIEKSTVSAKVSQLEASLGIRLLERT 60 Query: 56 TRSIELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLL 115 TRS+ LTE+GR + LN I ++S +R C L + ++ Sbjct: 61 TRSVRLTEAGRDYLAYCEQALNTLQQGDDYIHSLSGEPSGTIRFCAPHNLI-DFILSSVI 119 Query: 116 QVLKKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFA 175 + +P + + + + ++ ++AI + + + +W F Sbjct: 120 EPFLTCYPKVNLEIHQVNGD---EGFLSGNYDLAIRNHRGEIKDTSLICRPLFESQWVFV 176 Query: 176 IAPDHPLAFVPEPIAESQLRLYPNIMVEDTA--HTINKKVGWL---LHGQESILVPDFNT 230 I+P L P L P+I +++ + T + + W L+ + V + T Sbjct: 177 ISPKQ-LDEFGYPETPEHLLSQPSIGLKNASTNKTYDPHLIWQDQKLNFRHRFAVDNMRT 235 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV 284 LG G G +P MV+E + Q LV + + L Sbjct: 236 VIASIKLGLGFGMVPKNMVKEELAQGELVEIIKDIVIPPTSLYLIYPSRVGQPA 289 >UniRef50_Q082Z0 Transcriptional regulator, LysR family protein n=14 Tax=Gammaproteobacteria RepID=Q082Z0_SHEFN Length = 315 Score = 207 bits (528), Expect = 3e-52, Method: Composition-based stats. Identities = 56/261 (21%), Positives = 107/261 (40%), Gaps = 5/261 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 N +++ E L AF + GSFS AA L S IS + +E + LF RS R +L Sbjct: 19 NDMYSIEQLEAFVATVKTGSFSSAARALNKAQSVISQHVINLEIDCNSELFDRSGRYPQL 78 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +G+ A LL+ ++ ++ Q + + I +++ + K ++ L+ + Sbjct: 79 TPAGKKLLPHAQVLLSQHQRLRDCAQSLDQQAISELTIGLDEGIPLQK-LFNIINELEAK 137 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FPT + T + D I +A I + + ID+ IG+I++ +A H Sbjct: 138 FPTITLEFLTASSIDIIDMIDTERAVTGIIFSELTIPAH-IDFESIGSIKFDMYVASTHL 196 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA + L+L+ +++ + + ++ + + G G Sbjct: 197 LAQQ-IYDNLAHLKLHRQLLIR--SRNTKSSSFQFAISPDVWYADNYYILLELALQGHGW 253 Query: 242 GFLPDYMVREAMTQSLLVTRQ 262 LP+++ + LV Sbjct: 254 CLLPNHIANHYVDSGQLVMLP 274 >UniRef50_A8FC52 LysR family transcriptional regulator n=4 Tax=Bacillus RepID=A8FC52_BACP2 Length = 291 Score = 207 bits (527), Expect = 4e-52, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 106/265 (40%), Gaps = 11/265 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 EN+ AF + GS +KAAE L LT ++S I+ +E LD+ LF R + LTE Sbjct: 1 MNIENIEAFIYVCQLGSINKAAEALYLTQPSVSARIQSLEKELDLKLFDRQRNKLSLTEK 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F+ A +L+ + K + E + I + + +L LK+++ Sbjct: 61 GEQFYPHAKKILHSYQEAKHSLKQTMIPYE--LTIGCASSI-SNNLLPNILPALKEKYEN 117 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + T V +INNQ + I +T I+ I + + HPLA Sbjct: 118 LKVKIVTGHSKDVVQKVINNQVDFGIVRTETH---PQIESIPIFSDPIGLFVPTYHPLAS 174 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + + I +L P I + + + SI V T + G G Sbjct: 175 L-DNINMKELEEQPFIFFDYGSFDWLMLHRLFQKNNITPNISIEVDHMETAKNLVLQGMG 233 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN 265 + FLP + VR + Q L I Sbjct: 234 LSFLPHHCVRNEVEQGTLKQISIDP 258 >UniRef50_C3JZ35 Putative LysR-family transcriptional regulatory protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3JZ35_PSEFS Length = 284 Score = 207 bits (526), Expect = 5e-52, Method: Composition-based stats. Identities = 61/292 (20%), Positives = 118/292 (40%), Gaps = 9/292 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + E L AF AA GSFS AA +LG + S +S + +E LDVVLF RS+R LT Sbjct: 1 MASNEVLQAFVQAATQGSFSAAARKLGKSQSTVSAAVASLEIDLDVVLFDRSSRKPTLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +A +L ++ ++QG+E R+ I ++ + + ++ +++P Sbjct: 61 AGHVLLERAEQVLEASSRLELAASQLAQGLEPRLTIAMSDTYQSQRFETAII-AFAERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGA-IRWAFAIAPDHPL 182 ++ + + D + + +A IA + + + + A ++P H L Sbjct: 120 DLELEWLIAECDDLIDLVQSGRAQIAFIEQQDVYP-PDLTRSPVQERTEIALFVSPQHAL 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + + + L+ + + + + + + + LG G Sbjct: 179 ASL-DSVDHQTLKHHRELRLASIVKPYDNRA-----AGRVWSAASYLMLMEMAQLGFGWA 232 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 LP ++V SL + PR + L ++ A G W+ Sbjct: 233 PLPRWLVERFGNASLQELKVRGWPRSVTVDALWSRQHAPGPAGSWLLATMLE 284 >UniRef50_Q12M83 Transcriptional regulator, LysR family n=21 Tax=Shewanella RepID=Q12M83_SHEDO Length = 309 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 65/288 (22%), Positives = 120/288 (41%), Gaps = 6/288 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ GSF+KA+E L SA+SY +K++E L V LF R ELT Sbjct: 3 IDIDSFNVLQVLVEEGSFAKASERLHKAQSAVSYQVKKLEQHLGVTLFNRDKYRAELTPE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + LL I+ SQG E ++ + I+ L L+ + + Sbjct: 63 GKVILIEGQRLLEQLANIEHLASRFSQGWEPKLELVIDGSLPMEP-IMTALKRMSEHNVP 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + E GV ++A++ + G D + +I +A HPLA Sbjct: 122 TKIQLNMEFLGGVQHRFERDKADLMLV--KDYRSGPYYDAKPLPSITSVLVVANSHPLA- 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + ++ SQL+ + + +ED++ + + G + + F K + G G G++ Sbjct: 179 LSKAVSLSQLQQHVELTIEDSSPSRLGRDELQFGGDKVFYLSGFIMKKNALLKGLGFGWM 238 Query: 245 PDYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKK 290 PD+++ E + LV + + L++T G+ Q + Sbjct: 239 PDFLIGEELAAGELVMVDFMGGSRFNYTPQLVSTLARPLGRAGQLFTE 286 >UniRef50_Q15RK7 Transcriptional regulator, LysR family n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15RK7_PSEA6 Length = 297 Score = 205 bits (523), Expect = 1e-51, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 123/299 (41%), Gaps = 7/299 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E L A S AA +L T A+S+++K++ET L + LFTR + + LT Sbjct: 1 MITIEQLKVLKAIAEEKSLRAAASKLNKTQPALSHSLKQLETQLGLELFTRDSYRLSLTN 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ + A L + I++ + ++ G EA+V I I + + + + + +K QFP Sbjct: 61 AGKTALQMALKALREVSLIEQYANHLNLGNEAKVIIAI-EAAFPIEPLFPVFEQIKNQFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAI-GAP-DTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 + Q+++T E G + +A +A+ GAP D L + +I P Sbjct: 120 STQLSLTQEYVTGALQLVAEGKAQLAVTGAPIDYLAKSSELFSKQIAEGELINVATPQ-M 178 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 L + L I+V+DT GQ+ V F K + G Sbjct: 179 LERYQPLDSIEALVNENQIIVKDTGKITQDNYFNTQTGQKRWYVNSFEAKHKLISHSLGW 238 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT---GQVTQWIKKQFAPNGI 297 G LP++ + + L ++ + + S + + G V I F+ + Sbjct: 239 GMLPEHFISNQLASGALQKIRVADKKCSSTFPFYLIKNKSKILGPVATEIWNAFSELKL 297 >UniRef50_B4SLV6 Transcriptional regulator, LysR family n=3 Tax=Stenotrophomonas RepID=B4SLV6_STRM5 Length = 283 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 115/292 (39%), Gaps = 12/292 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E+L AF AA GSFS AA L T S +S I +E L V LF RS R +LTE Sbjct: 2 PYSPESLQAFVEAAALGSFSAAARRLRKTQSTVSTAIAHLEADLGVSLFDRSGRYPQLTE 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR A ++L +++ ++ +E R+ + + +Y R+LQ + FP Sbjct: 62 AGRQVLGHAQEILAADTRLQQLSVRLAAPVEPRLTVAFSD-VYQLDPEQRVLQRFAEAFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIG-AIRWAFAIAPDHPL 182 ++ V + + N +A + + P G+ + + +A +HPL Sbjct: 121 EIELEWLDAEGEDVLELVSNGRAALGL-LPRQEHYPDGLVARPLAHHSELSVYVAREHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A A +QL + + + G + D+ + G G Sbjct: 180 ASAGRR-AAAQLARHRQVRLSAEVDQSRVVTGL------AWTATDYLMVMEMAEDGLGWA 232 Query: 243 FLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 LP +V+ + LV + PR+ LL + + G W Sbjct: 233 ELPRALVQRY-DRGRLVELVLPGWPRRIHSDLLWRRDTPPGPAALWWADALG 283 >UniRef50_A8FSN0 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=A8FSN0_SHESH Length = 292 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 5/262 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E L++F T GSFS AA +LG SA+S I ME D+ LF RS R +LT+ Sbjct: 1 MSTIEQLISFVTTVESGSFSAAARKLGKVQSAVSQNIMNMEIDTDLYLFDRSGRYPKLTK 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +A ++ + +++ + E ++ + I++ + LL L+ Q P Sbjct: 61 AGEKLLPQAKAVIAQHRRLDQQVKALESDEELKLTLAIDEGIPYSGLI-DLLPQLEAQHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ V + + +A + D + ID+ +G +++ ++P H LA Sbjct: 120 QLQLEFLCASSQDVIQLVADKRATSGLVFSDNVYP-EMIDFETLGTVQFELLVSPKHVLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + L L+ +++ + H + ++ + G G Sbjct: 179 Q-TDAAHVDILMLHRQLVIGSQGSKVT--WFNQAHSPDVWYADNYYVLLELAKSGFGWTL 235 Query: 244 LPDYMVREAMTQSLLVTRQIHN 265 LP ++ +A+ + L + Sbjct: 236 LPLHLAEDAINKKQLCKVPVQF 257 >UniRef50_B1KLA1 Transcriptional regulator, LysR family n=14 Tax=Gammaproteobacteria RepID=B1KLA1_SHEWM Length = 305 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 11/291 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN ++ L AF + ++GSFS AA +LG S IS I +E L LF RS R Sbjct: 1 MN--WSLYQLEAFVLSVKYGSFSAAARKLGRAQSRISTAIGHLEDDLGFELFDRSARLPV 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F +A +L ++ R T+S G E + + +++ + L + + Sbjct: 59 LTPCGEDMFIEAQAVLQQCQRLESRAMTLSTGQEISLTVAMDEAVPINAF-ESLFEQVSI 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++T+ + + + +A++ I +++ IG + + ++ +H Sbjct: 118 KFPLLKLTIINGSQDDIGLWVDEGKADMGILFHSRNELPESLEFMSIGQFKQSLIVSVNH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA P +L + +++ D +K+ L + + I G G Sbjct: 178 PLAQFSAP-KIKELNQHRQLVIRD--RMGDKQAKAL--AANHWYIDSYYYMTALVIRGVG 232 Query: 241 IGFLPDYMVREAMTQSLLVTRQ---IHNPRQDSRMLLATQHSATGQVTQWI 288 +P+++ +VT I +P ++ + A G V +WI Sbjct: 233 WALVPEHIANSEWYSDDIVTLSTEHIPSPLLVEIGVVNRRDQAYGPVMEWI 283 >UniRef50_B0TSK1 Transcriptional regulator, LysR family n=14 Tax=Gammaproteobacteria RepID=B0TSK1_SHEHH Length = 303 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 121/298 (40%), Gaps = 12/298 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S+++ E L F T GSFS AA +L S +S I +E ++ LF R + LT Sbjct: 2 SMYSFEQLKIFVTVCETGSFSAAARKLKRAQSGVSQAIANLEITINQELFNRDKNTPILT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 ++G+ A +L+ +++I+++++ E + I +++ L +L L ++F Sbjct: 62 DNGKALLPIAQSILHQQQYFEQKIESLAKASEHELIIAVDESLINDDLLG-ILVPLAEKF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + V + + +A I I D L +D+ +G R+ + H L Sbjct: 121 PITHFEIIAASTFDVEELVRKGKAQIGIIYADGELKV-DMDFFILGQARFLTIASSKHEL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH--GQESILVPDFNTKCQCQILGEG 240 A +P + +S L+ Y + + +K W + G G Sbjct: 180 AQLP-VVQDSDLKSYRQCVHR----SAKQKELWFSYAISTMVWYTNTHQNLVTLVEKGVG 234 Query: 241 IGFLPDYMVREAMTQSLLVTRQIH---NPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 +P+++V+ + + +V + N + L ++ +G V + + + Sbjct: 235 WAVVPEWLVKSNIERGEIVALPVAHEYNGWLTTVGCLVSRSHGSGPVLENVIDSLKNH 292 >UniRef50_Q12N18 Transcriptional regulator, LysR family n=22 Tax=Alteromonadales RepID=Q12N18_SHEDO Length = 324 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 52/287 (18%), Positives = 116/287 (40%), Gaps = 8/287 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E G +++AAE+L + S++++ + +++ L + L R LTE G Sbjct: 29 TLEQWRILQAVVDHGGYAQAAEKLNKSQSSLNHAVAKLQHQLGIPLLEVKGRKAYLTEQG 88 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R++ L +++ + QG E + + +++Y L+ Sbjct: 89 EVMLRRSRHLTQTVEELEQLAHNLEQGWEPSLTLG-REIIYPMPLLVAALKAFLPHSRGT 147 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++T+ V +G + I +I+I A + G + + + P HPLA + Sbjct: 148 RVTILDTVLSGTNELINAQSVDISICA----VPPKGYISEPLCEMEFYLVSHPSHPLAQL 203 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + + QL + ++++DT + GW L ++ V +F+ + G ++P Sbjct: 204 TQVDDDKQLAQHLQLVIKDTGTLGSSDTGW-LKAEQRWTVANFHEAKEILNQEMGFCWMP 262 Query: 246 DYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKK 290 +V + +T+ L + R+ L+ G + +++ Sbjct: 263 RLLVEQDLTEGRLARIYLLGSQSRKAMMSLVIPNRDRQGPAAKLLEQ 309 >UniRef50_C1DLB3 LysR family transcriptional regulator protein n=1 Tax=Azotobacter vinelandii DJ RepID=C1DLB3_AZOVD Length = 300 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 8/291 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E+L A R G F +AA+ L SA+SY ++++E L + L R + LT + Sbjct: 3 IDLESLAALDAVVRHGGFGRAAQHLHKVQSAVSYQVRKLEEQLGLALLDREGYRVRLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL + + + G E R+ + + +L + L+ L + Sbjct: 63 GETLLAEGRRLLGNAARFEALARQFTDGWEPRLLLVADGILSLDAVLS-ALKTLADEHVP 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V E GV QA++ I + + I +PDHPLA Sbjct: 122 TRVQVKIEFMFGVQYRFEKEQADLMIVKDYE--PDRQLHAEPLPEIECVLCTSPDHPLAA 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 V E + + L + + V+D++ + + + G + F+ K Q +G G G++ Sbjct: 180 VGE-VDLALLHEHVELTVQDSSDRGDDRH--MFGGDRVYYLSGFSAKQQALHMGLGYGWM 236 Query: 245 PDYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 P YMV + + + LV + + + + ML+ + G+ + + + Sbjct: 237 PLYMVADELARGALVEVRYRGGSRYRFTPMLVQRLNKPLGRAGRRLAELLR 287 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 203 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 11/274 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +FR+ +L + A + I +RI + L++ ++++P Sbjct: 64 ERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVL-HFLMPLIKPFRERYPEV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +++ V + +I + ++AI A L + + +PD+ ++ Sbjct: 123 TLSL---VSSETIINLIERKVDVAIRA--GTLTDSSLRARPLFNSYRKIIASPDY-ISRY 176 Query: 186 PEPIAESQLRLYPNIMVEDTAH----TINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 +P L+ + + + A I + G L + + T Q + G GI Sbjct: 177 GKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGI 236 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA 275 L DYM+ + + + LV A Sbjct: 237 ACLSDYMIDKEIARGELVELMADKVLPVEMPFSA 270 >UniRef50_B8CKK6 Regulatory protein, LysR:LysR, substrate-binding n=3 Tax=Gammaproteobacteria RepID=B8CKK6_SHEPW Length = 290 Score = 203 bits (517), Expect = 6e-51, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 114/293 (38%), Gaps = 9/293 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E L AF AA GSFS AA +G + S++S + +E L V LF RST+ LT+ Sbjct: 1 MLNLEQLNAFVAAAEKGSFSAAARHIGKSQSSVSIGVNNLELDLGVNLFDRSTKYPTLTQ 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G +++A ++ ++ + +E + I ++ L+ L+ + + FP Sbjct: 61 QGERLYQQAKVIIRQANRMENYAQGTIEEVEDELVIAVDPLVP-MSVFDFALEKMAQAFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +I + + + A++ AN+ + +D+ I + W +PD A Sbjct: 120 FTRIKLVKLFGDELNRALVEQTANLGFNIASDAIP-ENLDFVTITQVEWVCVCSPDSKFA 178 Query: 184 FVPEPIAESQLRLYPNIMVED-TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 + E + L I H + K L QE+ D + + G Sbjct: 179 DM-EMVDNEMLITERQITCTSMLQHKLLKNSA--LVSQETWEASDQDDMIRLVEQDLGWA 235 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQ---DSRMLLATQHSATGQVTQWIKKQF 292 FLP M+ E + + R + L+ +S G +I Q Sbjct: 236 FLPKSMLDEKLAIGTISQFTPEFNRAKMYSAIDLIWKSNSPKGPAMSFIVDQM 288 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 15/279 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++L+ FTT + +F+ AA +LGLT SA+S I +E L V L R+TRS+ TE Sbjct: 1 MARLDSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ FF + + LL D + + + ++I + ++ +Q+P Sbjct: 61 AGQLFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATP-TFGRAMLMKIFAQFLEQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +T + D + ++AI L + + + + ++ LA Sbjct: 120 DVNFDLTLA--DKGLDLVREG-IDLAIHLGS--LQDSRLVARPVARQKVILVGSKEY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMV------EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 +P A ++L + +MV E K L + V D +T C+ + Sbjct: 174 EHGQPEALNELVNHFILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAALN 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTR--QIHNPRQDSRMLL 274 G G+ LP YM+RE + LV IH P + ++ Sbjct: 234 GMGLAALPVYMIREHLDSGKLVHILPDIHFPVRTIHVVY 272 >UniRef50_A6B821 Transcription regulator, LysR family n=2 Tax=Vibrio parahaemolyticus RepID=A6B821_VIBPA Length = 294 Score = 203 bits (516), Expect = 8e-51, Method: Composition-based stats. Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 5/248 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +FT E L AF GSFS AA +LG S IS I ME V LF RS R +LTE Sbjct: 1 MFTIEQLQAFVATFESGSFSAAARKLGRAQSVISQHIMNMELDCGVDLFDRSGRYPKLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G A ++ + + + + + + I++ + + +L+ L++QFP Sbjct: 61 NGHALMPYAQAAISQLDRLNNKATQLFSAQASELVLAIDEGIPLTR-LPDVLKNLEQQFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ T + + + + +A I D + ID+T +G I + ++ DHPLA Sbjct: 120 QLQVECLTASSPDIIELVKSERATTGIILSDLQMPRH-IDFTNLGNIAFDVYVSSDHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 QL+ Y +++ + L + ++ + G G F Sbjct: 179 AQ-RITHIDQLKQYRQLVIRSKSAEPGSLNQAL--SPDIWYADNYYILLELANKGFGWCF 235 Query: 244 LPDYMVRE 251 LP+++V + Sbjct: 236 LPEHLVAD 243 >UniRef50_B5WQC5 Transcriptional regulator, LysR family n=1 Tax=Burkholderia sp. H160 RepID=B5WQC5_9BURK Length = 296 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 61/296 (20%), Positives = 118/296 (39%), Gaps = 6/296 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN T L F GSF+ AA L T + + +E + + L R+ + Sbjct: 1 MNEP-TLLQLQCFEALVSEGSFAAAAAHLNRTHPTVHAAVTALEAQVGMTLLDRAGYRVT 59 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F + L+ + ++R + ++ G EA +R+ + L + L+ + Sbjct: 60 LTAEGVAFRSRVAVFLHQYENLRRDVAQLAAGQEAELRVVVGDLCPLSETLGP-LKQFFE 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ + E +G W+ + N ++ D L I+ E+ ++ AP Sbjct: 119 TSTGTRLALLFEAISGPWERLRNGDCDLIFHHLDKL--SPAIETIELFDVKLVPVAAPGF 176 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 + E + +R Y ++ DT+ + +L+ G + VPD K + + G Sbjct: 177 LRQPLDESLTPDDVRPYVQCVIRDTSKQPSDANYYLIEGAPTCTVPDQLMKRELIVQGLA 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA--TQHSATGQVTQWIKKQFAP 294 G +P ++V + + LV+ + + R + A + A G V Q + Q Sbjct: 237 WGHMPSHLVAADLKEHRLVSLEGRHLRGATLKHYAARRRDDAHGPVAQRLWMQLLE 292 >UniRef50_B6R6F6 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R6F6_9RHOB Length = 320 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 9/283 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + L F T A+ SFSKAAE +T S +S +IK++E L L RS R++ LTE Sbjct: 8 LPTLKQLQYFKTLAKHLSFSKAAEACFITQSTLSASIKQLEGILGCELLDRSGRTLVLTE 67 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G KA+ LL D + + + ++ + R R+ + + P R L L+ +P Sbjct: 68 AGESVLEKASLLLRDAEDLVQGVQAQNKPLCGRFRLGVIPSV-APFLLPRFLPQLRDLYP 126 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + ++ + A+ + + A+ A D G + EIG+ + A+ HPLA Sbjct: 127 ELQLFLREDISRNLMIALREGRIDAALMA--LPYDTTGFESAEIGSDAFYLAVPGAHPLA 184 Query: 184 FVPEPIAESQLRLYPNIMVED----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 + E + L +++ED H + G +L E + +T Q G Sbjct: 185 GLSEVLM-EDLANEVLLLLEDGHCLRNHVLAAAGGRMLTANEDVQATSLSTLVQMVDNGI 243 Query: 240 GIGFLPDYMVREAMTQSL-LVTRQIHNPRQDSRMLLATQHSAT 281 G+ +P V + + L +I +P+ + + + ++ Sbjct: 244 GVTLVPRIAVDADIDRGTSLKLIKIADPKARRTIGMVWRRKSS 286 >UniRef50_Q0B6H7 Transcriptional regulator, LysR family n=15 Tax=Burkholderia RepID=Q0B6H7_BURCM Length = 296 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 65/297 (21%), Positives = 112/297 (37%), Gaps = 8/297 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T +++ T GSFS AA LG T SA+S I +E LD+VLF R TR T Sbjct: 1 MLTSDHIDMLLTVIDKGSFSAAARALGRTPSAVSMAIANLEAELDLVLFDRGTREPTPTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 + A + A++ +S+G+E +R+ + L AR L + ++P Sbjct: 61 AMAALLPDARSIAERLQALRAHAQHLSEGVEDTLRLGLAAELDGAP-VARALSAVAAKYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP-L 182 I++ T + + DA+ ++ + L + AP HP + Sbjct: 120 ALAISIVTAPQDAIVDALHRGAVDLCVAYGGLDLHPQE-QIHALWTETLIAVAAPGHPAI 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P A +L + I++ D + + G + V D T G G Sbjct: 179 AEAAHPEAIERLSGFRQIVIADPERPLTDVRPVI--GNRTWKVTDMATAIALVKAGHGWA 236 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ---HSATGQVTQWIKKQFAPNG 296 LP+ + + L N R + + + H+ G+ + + G Sbjct: 237 NLPESTIGRYVDTGELAPLVFANIRNGLLLPVYLRRPKHTGLGKAASELVRALRAEG 293 >UniRef50_C7GB30 Transcriptional regulator n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GB30_9FIRM Length = 316 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 113/266 (42%), Gaps = 12/266 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F T GS +K AE+L +T A+S TIK +E V R R + TES Sbjct: 1 MNNRQLTIFRTVCEEGSMTKTAEKLYMTQPAVSQTIKELEQESGVCFLERYNRKVVPTES 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR ++ A +L + +++ + ++G+ +RI N L K ++ +K++P Sbjct: 61 GRLLYQYACHILGLYQDLEQHLKE-TEGVR-TIRIGAN-LSVGVKMLRGFIRAFEKKYPD 117 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ VT + + + +Q ++ + + L R APDHPLA Sbjct: 118 IQVKVTVSGSVRLMELLKTHQIDLGLM--EDLPGETDYIQEPFAKDRTLIVAAPDHPLAG 175 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNT-----KCQCQILGE 239 E + L+ ++ E A + + +L ++ ++ P + + Q G Sbjct: 176 -KEHVRFEDLKKENFLLREKGAG-VRDRFEAILRTKDCVIDPLWESRSTKVLVQAVEDGF 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHN 265 GI LP ++ E + + L ++ + Sbjct: 234 GISVLPYCLIEEYLKEGRLAEIKVED 259 >UniRef50_B9Y467 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y467_9FIRM Length = 309 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 110/279 (39%), Gaps = 10/279 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T +L F R GS +KAAE L L+ A+S I+++E ++LF R ++ + LTES Sbjct: 1 MTLRHLRIFVEVCRTGSITKAAESLHLSQPAVSLAIRQLEDYYGILLFDRISKKLYLTES 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A+ ++ F ++ ++ +RI + + + +L++ +FP Sbjct: 61 GNKMLSYASHIIESFDDMETQLKNWDSA--GTLRIG-SSISTGTQMLPQLVRRFNLRFPQ 117 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + V + + D ++ NQ ++A+ ++L I R AP HPL Sbjct: 118 IRTQVLIDNSRIIEDKVLTNQLDLALV--ESLSYSPDIVCVPFYTDRLIVITAPKHPLTQ 175 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ----ESILVPDFNTKCQCQILGEG 240 PE L YP ++ E + T L+ + + G Sbjct: 176 NPE-CTVKALADYPVLLREPGSGTREVVDALLVTAEVQITPLWESTSTRSIINAVKENIG 234 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 I LP +V+ + + + +P + + + Sbjct: 235 ISILPYELVKNEIQSGAVAGLPLASPLPNRTCSIIHHRN 273 >UniRef50_Q2T002 Transcriptional regulator, LysR family n=103 Tax=Proteobacteria RepID=Q2T002_BURTA Length = 294 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 109/279 (39%), Gaps = 5/279 (1%) Query: 19 FGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDLLND 78 GSFS AA +LG S +S I +E L V LF RSTR LT++ R + +L Sbjct: 17 LGSFSAAARKLGKRQSTVSEAIANLEIDLGVTLFDRSTRQPTLTDAARALLPEVQRVLEA 76 Query: 79 FYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYNGVW 138 AI + ++ G EAR+ + ++ Y L L ++FPT + ++ V Sbjct: 77 SEAIDQVAARLAGGEEARLTLVVSD-TYQSSRYEETLAALDRRFPTLEFECQIAEHDDVL 135 Query: 139 DAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE-PIAESQLRLY 197 D I +A + + A + T + P HPLA + + + L Sbjct: 136 DLIQQGRAQLGLMAARSTYPPDIGTATVAERSEIGLYVGPQHPLAAHGDAEVPLAALHDA 195 Query: 198 PNIMV-EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQS 256 + + A + L+ G+ L P + + + G G LP +MV E + Sbjct: 196 RELRLNTYVAPRGERIETGLVAGRRCWLAPSYLQLMEMAVAGFGWAELPRWMV-EHFARE 254 Query: 257 LLVTRQ-IHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 LV PR+ + ++ G W+ + Sbjct: 255 RLVELNARGWPRRVPVDAVWSRGQPLGPAGSWLLETMLA 293 >UniRef50_B9ZS82 Transcriptional regulator, LysR family n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZS82_9GAMM Length = 310 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 117/289 (40%), Gaps = 9/289 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + E G F++AAE++ + S++++ ++++E L V +F R LT +G Sbjct: 15 SLEQWRMLQAVVAAGGFARAAEQVHKSPSSVNHAVQKLEERLGVEVFEVQGRKAVLTPAG 74 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R+A LL + I+ ++ G+E+ VR+ ++Q+L + L+ + +P Sbjct: 75 EALLRRAEHLLEEAAEIEALAGALAAGVESEVRLAVDQILPRGPVI-QALERFSRAYPAT 133 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + V +G + + + +I I GG + P HPLA Sbjct: 134 RVQLEEVVLSGGPELLREGRVDILIA----PELPGGYLGAWLTDQVMVCVAHPGHPLAD- 188 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + L+ I+V D+ + GW L + V +T + G G +LP Sbjct: 189 GRRLTRRDLQAQRQIVVRDSGEQQAGEGGW-LEADQRWTVSHMSTAREILCSGIGFAWLP 247 Query: 246 DYMVREAMTQSLLVTRQIH-NPRQDSRMLLA-TQHSATGQVTQWIKKQF 292 + E + Q LV + R + +A G +Q + + Sbjct: 248 LDRIAEDLAQGRLVELNLEAGTRHEVPFYMAHADRDRAGAASQALMEAL 296 >UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y5B3_CROTZ Length = 313 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 110/264 (41%), Gaps = 16/264 (6%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + L +F A SF++AA LG++ SA+ + R+E L V LF RSTRS+ LT Sbjct: 9 MDSFTALASFVRTAETLSFTQAARVLGISASAVGKNVARLEQKLGVRLFNRSTRSVSLTA 68 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G + L + + + + R+RI + + Y L ++P Sbjct: 69 EGATLLARCRPALEQLREAEAELTSATDTPSGRLRISLPVIGY--HLLMPFLPAFAARYP 126 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + ++ +++ ++AI + + + + T +G R+ +P + LA Sbjct: 127 EIDIEL---DFSDRLVNLVDEGFDVAIRSGE--MADSRLTATTLGHFRFVLCASPVY-LA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG------QESILVPDFNTKCQCQIL 237 P L+ + I+ + + + W L G ++ V + + + Sbjct: 181 EHGAPQTPDALKKHRCILFRFPSTGLIQP--WELTGLTMTGAPSALTVNNIEAMIRAAVA 238 Query: 238 GEGIGFLPDYMVREAMTQSLLVTR 261 G GI ++PD++V +T+ L Sbjct: 239 GMGICYVPDFIVNSLLTRGELQEV 262 >UniRef50_Q7NWQ9 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NWQ9_CHRVO Length = 299 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 111/281 (39%), Gaps = 8/281 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E G F++AAE L + SA+SY + R++ L V L + R + LT G Sbjct: 4 TLEQWQVLRAIVEEGGFAQAAETLHRSQSAVSYAVARLQEQLGVALLRQEGRRMRLTVEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R+A +LL +++RR ++ +G E +++ ++ LL A Sbjct: 64 EVLLREAGELLRQADSLERRAGSLRRGWEPELKVAMDSLLPVEVVLA-ACGDFAGHCRET 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + V +G DA+ A +A+ G + + AP H L + Sbjct: 123 RLRLHEVVMSGADDALYQGDAALAVAGR----VPQGFLGDWLLDAEFIACAAPGHRLHAL 178 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + +LR +++ DT + GW L ++ V T G G+L Sbjct: 179 GGELDGEKLRGEVQVVLRDTGIRQPRDEGW-LGARQRWTVSQPETGIAMVEAGLAFGWLA 237 Query: 246 DYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQV 284 + +R + + L + R+ S L+ + S+ G Sbjct: 238 RHRIRRQLAEGSLKPLPLKSGAVRKASLYLVLAEPSSAGPA 278 >UniRef50_C7JFW5 Transcriptional regulator LysR n=8 Tax=Acetobacter pasteurianus RepID=C7JFW5_ACEP3 Length = 305 Score = 200 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 53/279 (18%), Positives = 119/279 (42%), Gaps = 15/279 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T ++ F GSF+ AA + L+ + ++ + +ET L V LF RSTR + Sbjct: 1 MLDRIT--SMQIFVKVIAAGSFTGAARLMALSPTMVTKHVTALETRLGVSLFHRSTRHLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR F +L D +++ + + ++R+ + + ++ A L + Sbjct: 59 LTEAGRLFLESCQKILADVENMEQTVSEQYREPRGQLRLNAP-VSFAIRYVAPYLSEFSR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P QI + N ++ ++ + + L + ++ A+R +P + Sbjct: 118 RYPQVQIEL---GLNDRPVDLVEEGWDLTLRIRN--LTISTLRARKLAAVRMVICASPSY 172 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV------PDFNTKCQC 234 LA P +L+ + + + + + + +G++++ V + + + Sbjct: 173 -LAKAGTPTHVDELQHHNCLGYTLSGNNSASRWHFGDNGEKTVSVSGLLCANNGDALREA 231 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML 273 + G GI +LP ++V + + + L+ + P L Sbjct: 232 AVAGAGIAYLPLFVVSQELQRGQLIALSLDYPTTPGPDL 270 >UniRef50_C1DBU0 Probable transcriptional regulator, LysR family n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DBU0_LARHH Length = 294 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 69/289 (23%), Positives = 115/289 (39%), Gaps = 9/289 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + L AF+TAA GSFS AA L + S +S I +E L V LF R R+ LT +G Sbjct: 4 TLDALTAFSTAAELGSFSAAARYLHKSQSTVSEAIANLEIDLGVSLFDRGARNPVLTAAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R A +L + R+ +S G+E ++ I ++ L++ + LLQ L+ +FP Sbjct: 64 EQLLRHARQVLAAHEQLTRQASLMSAGLEPQLSIVLSDTLHSLE-LETLLQGLETRFPEL 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ V D + + +A++ + + G ++A HPLA Sbjct: 123 ELETLVAEKEDVVDLVASGRAHLGLLSALPHYPAGIGHAALPHQGQFALFAGRHHPLARQ 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + QL + + + L P + LG G LP Sbjct: 183 KALL-PDQLAPFRQLCLNTLGSPAPASTH-----PRRWLAPSYLMLLDMTRLGFGWAELP 236 Query: 246 DYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 +M + + LV + PR L+ + G W+++ A Sbjct: 237 SWMAQTF-GRDELVQLDVAGWPRPIPIDLVWSSGRRPGLAAAWVRQFLA 284 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 200 bits (509), Expect = 5e-50, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 109/294 (37%), Gaps = 10/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F ++ F++AAE+L ++ ++S I+ +E + + LF R + I LTE+ Sbjct: 9 IELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTEA 68 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + + ++ + I ++ + I + L + KQ+P Sbjct: 69 GRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIG-SLLTVVNYLLPPAILDFNKQYPN 127 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +++V + + ++ N+ +I I + I + + H L Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITF--LPVQDKEIVSIPLYKSELTLVVPTSHSL-T 184 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVG----WLLHGQESILVPDFNTKCQCQILGEG 240 + ++ +L+ YP I++ + + + + + + Q G G Sbjct: 185 ERKYVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMG 244 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFA 293 I LP + + + + +I NP + L+ + T+ +Q Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLK 297 >UniRef50_B6EJX0 HTH-type transcription regulator, LysR family n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EJX0_ALISL Length = 287 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 63/292 (21%), Positives = 126/292 (43%), Gaps = 16/292 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F + L GSFS AA +LG SA+S I +E V +F RSTR LT Sbjct: 1 MFNLQQLETLILCVECGSFSAAARKLGKAQSAVSTAIANLEIDTGVEIFDRSTRLPTLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ + ++ LL+ I+ + + S G+E + I IN+LL TP ++ FP Sbjct: 61 HGKRLYTQSIHLLSQAKDIETMLHSFSLGVEDTLTIVINELLLTPTFF-NVINEFYLYFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + + + +A+I D L ++ +G + + +HPL Sbjct: 120 HTELHINIAENKDISELVAQGKASIGFMLCDDALPQK-VELGLVGYLPISMVANNNHPL- 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESIL-VPDFNTKCQCQILGEGIG 242 + I ++L+ Y I++ N W +H S+ + + + + G Sbjct: 178 HSQDSIHLNELKRYHQILL------TNMHSPWNVHFSSSVTKTNNASALQSLLTVNDSWG 231 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRML---LATQHSATGQVTQWIKKQ 291 F+PD++ ++ ++L + + ++ + + +++ GQ W+ + Sbjct: 232 FVPDHLTKK---NNVLKILDLDSEEKNWLLHIDRVVIKNNNIGQAYSWLYQH 280 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 63/306 (20%), Positives = 110/306 (35%), Gaps = 21/306 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L AF A SFS+AA L LT A+S I +E LD LF R R LT + Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G KA ++++ IK + ++S + +RI + + H +L+ +P Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHIGL-HHLPHILRKFHSTYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + +A+ N + +IA L +D I F + HPL+ Sbjct: 120 VKLAMQFLGSEAACEALANGELDIAFATLP-LEQDPKLDMQAIWRDPLTFVCSHTHPLSK 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHT--------------INKKVGWLLHGQESILVPDFNT 230 I L + I+ E T + + S++ T Sbjct: 179 QKN-IHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMET 237 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 +G G LPD+M ++ L+ + + +L + G + Sbjct: 238 IKMMASVGLGWAVLPDHMAQD----KDLIRLNLGIHPYRNLGVLQRKGKTLGSAGKAFLA 293 Query: 291 QFAPNG 296 +G Sbjct: 294 ILPNHG 299 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 198 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 105/280 (37%), Gaps = 10/280 (3%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 E L F A SFSKAAE+L L+ A+S I+ +E L RS++ ++LT +G Sbjct: 3 IETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPAGE 62 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + +A ++N + K +I+ I + +RI + L+ +++P Sbjct: 63 ILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGAS-FTIGEYILPELVSQTARRYPNLN 121 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I VT + + N+ ++A+ + + G P HPLA + Sbjct: 122 INVTIGNTEEIAQGLRQNRLDVALV--EGKITGKEFILEPFMVDEMVLIALPSHPLAKIK 179 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEGIG 242 + L I+ E + T ++ + + S + G GI Sbjct: 180 G-VTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLGIA 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSA 280 + ++++ + + + PR L+A Sbjct: 239 LVSKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQT 278 >UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=Proteobacteria RepID=D2TI95_CITRO Length = 305 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +FR+ +L + A + I +RI + L++ ++++P Sbjct: 64 ERYFRRVQSVLQEMAAAETEIMETRTTPRGLLRIDAATPVVL-HFLMPLIKPFRERYPDI 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +++ V + + +I + ++AI A L + + +P++ +A Sbjct: 123 TLSL---VSSETFINLIERKVDVAIRA--GKLTDSSLRARPLFTSYRKIIASPEY-IARF 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-----ILVPDFNTKCQCQILGEG 240 P L+ + + + ++N GQ I T Q + G G Sbjct: 177 GRPETVEDLKQHLCLGFSEPV-SLNTWPVACCDGQLHEIECGISSNSGETLKQLCLTGNG 235 Query: 241 IGFLPDYMVREAMTQSLLVTR 261 I L DYM+ + + LV Sbjct: 236 IACLSDYMIDREIARGELVEL 256 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 48/266 (18%), Positives = 95/266 (35%), Gaps = 9/266 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L F A G+F++AA +L LT A+S ++ +E L V LF RS R + LT Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + + + ++ ++SQ R+ + + ++ + + + ++ P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSA-YYLPGYMVLFHQRHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + + + + + I + + + LA Sbjct: 120 VTLDLAVHNSHVIAEKVYRGELEIGFCG--SSPSHPNLRAHFLHREPLIVVAGRKSALAQ 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES------ILVPDFNTKCQCQILG 238 P+ L +P I+ E NK W + V + Q I G Sbjct: 178 KDGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVAKQLVING 237 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIH 264 G+ LP Y + L ++ Sbjct: 238 LGVTALPRYAAALELAAGQLTQLRLE 263 >UniRef50_B8CUJ1 Transcriptional Regulator, LysR family n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CUJ1_SHEPW Length = 293 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 68/293 (23%), Positives = 120/293 (40%), Gaps = 4/293 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELT 62 + T E L A GSFS A E+G++ SA++ I+ ME L++VLF R + ++ +LT Sbjct: 2 LVTPERLTYLVLVADKGSFSAAGREMGVSPSAVAQVIQNMEIDLNIVLFDRVAGKAPQLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G+ + +A +++ A+++R GIE ++ I + P + + + L +F Sbjct: 62 AVGKAMYLQALEVIPRLQAMEKRAQAFQAGIEDKLNIAVYGFTLFPTYVEK-IAALSNRF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P I + A N A+I I AP L G D I + W +P HPL Sbjct: 121 PELIINLMDVEDITALSADDVNAADIII-APTQLKQRHGYDTQIIDQLDWLVVASPSHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + + L + ++ + V L + F + G G Sbjct: 180 AKLKSRLTYQDLISHRQVITAENLFAEKHLVESLRLSPNLLYCSQFYQIESMLLNGLGFA 239 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQFAP 294 P ++ + + LV ++ + Q + S + G +W +QF Sbjct: 240 LFPSHLAEKHFAANALVELKMEDSEQQPGWPIELVWSPSLGPAGRWFVEQFVE 292 >UniRef50_A1S9J5 Transcriptional regulator, LysR family n=1 Tax=Shewanella amazonensis SB2B RepID=A1S9J5_SHEAM Length = 296 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 9/301 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S+F L A A S +AAE L T A+++ +K++E+ L + LF R + Sbjct: 1 MPSVF---QLQALCAAVEKPSLRQAAEALCKTQPALTHALKQLESQLGLPLFNRDGYRLV 57 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT SG ++ A L +++ +++G E RV + + + + L+ ++ Sbjct: 58 LTGSGERIYQLALKTLESHAELEQLAQHLARGDEDRVVLTV-EASFDLTPILSALESVQA 116 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIG-APDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +F +I + E G + + AN+AI L G +D + + AP Sbjct: 117 EFSQTEIVIQQEYLTGAVERVQQGHANLAITPLAPALSPGTRLDTQPLSQGQMLNVAAP- 175 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 LA P + +LR I+V+D+ + Q V F TK G Sbjct: 176 RLLARYPSLCSILELRKEYQILVQDSGSGTLGLKLGVQSAQRHWYVNSFATKLSLIEQGM 235 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM---LLATQHSATGQVTQWIKKQFAPNG 296 G G LP++M+ EA+ L ++ + R L+ S G V + ++ Sbjct: 236 GWGRLPEWMLTEALAAGRLQLLELADFPARQRFDYHLVRRSASVPGPVATRLWQRLGGGA 295 Query: 297 I 297 + Sbjct: 296 L 296 >UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=Proteobacteria RepID=A4XWR7_PSEMY Length = 304 Score = 198 bits (504), Expect = 2e-49, Method: Composition-based stats. Identities = 65/290 (22%), Positives = 110/290 (37%), Gaps = 9/290 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F A G FS AAE LGL+TS +S + R+E L LF RSTR + LTE+G+ Sbjct: 5 EGLDEFVAVAECGQFSAAAERLGLSTSQVSRQVARLEERLQSRLFYRSTRRVALTEAGQL 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F + L + R + + + +R+ + Y + L+ + P ++ Sbjct: 65 FLQHCQRLQDAREEALRAVGDLGAEPKGLLRMTCA-VAYGERFIVPLVNDFMARHPQLRV 123 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + E+ N D + ++AI L + + AP++ L Sbjct: 124 EI--ELSNRQLDLLHEG-LDLAIRL--GRLQDSRLMAARLAPREMYLCAAPEY-LQRYGR 177 Query: 188 PIAESQLRLYPNIMV-EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 P + S+L + ++ D ++ + Q + + G G+ LPD Sbjct: 178 PHSLSELARHNCLIGSSDHWSFVDNGRETQMRVQGNWRCNSGQAVLDAALRGFGLCQLPD 237 Query: 247 YMVREAMTQSLLVT-RQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 Y V E + LV+ Q H P + L Q + + Sbjct: 238 YYVLEHLASGALVSLLQQHRPPNTAVWALYPQQRHLSPKVRQLVDHLKAG 287 >UniRef50_A9KDX5 Transcriptional regulator, LysR family n=3 Tax=Coxiella burnetii RepID=A9KDX5_COXBN Length = 294 Score = 197 bits (502), Expect = 3e-49, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 116/279 (41%), Gaps = 10/279 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 ++ + + AF A G F+ AA++LG++ +A+S+TI+ +E L LF R TR+I LT Sbjct: 2 TLPSLHHFEAFLCVAESGGFTPAAKQLGISKAAVSHTIRLLEESLRTPLFVRDTRNIRLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E G F + L + A + + + +R+ N + H LLQ ++F Sbjct: 62 EEGELLFSQCKRLKEELDAARNLVAGFNSSPSGTLRMSCNP-YFAETHLFDLLQTYTQRF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + E + + +I G G+ I R+ +P + L Sbjct: 121 PKVKVELLVE---ERMPNMEREKIDIVFGI--NWPAPSGVVAKTIDKTRYVLCASPKY-L 174 Query: 183 AFVPEPIAESQLRLY---PNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P L + P++ +N K L+ + + + + +C + G Sbjct: 175 NKFGIPKTVKALEQHRYIPHLGRSPENVIMNLKNKVTLNLTPQLKLNNAHLIKKCALNGL 234 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH 278 GI L DYMV+E + LV + + + + + Q Sbjct: 235 GIIQLHDYMVKEELANGSLVEVLKDHFQAEIPIYIYYQK 273 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 111/280 (39%), Gaps = 9/280 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L + SFSKAA ++ A+S +K ME L RS + I TE+ Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F+ A +++ + A+++++ +SQ + +R+ ++ + +P Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVA-TVYTVGLHDLPPYIKKFIQTYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + N +++A+ NQ +I I A +G + + + ++P+HPLA Sbjct: 120 ARIHLEYSRTNKIYEAVRQNQVDIGIVAYPQ--EGRQLGVIPLPSDELVVIVSPNHPLAR 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-----ILVPDFNTKCQCQILGE 239 +P+A QL P I D K +L+ + T + Sbjct: 178 AGKPVALQQLHRLPFIAF-DPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKRSVEAEL 236 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 G+ +P + + LV I + R + + + + Sbjct: 237 GVSIIPRRCAQWEVRSGSLVALPIADMRIERPVGVIYKRG 276 >UniRef50_C9XSU0 LysR-family transcriptional regulator n=4 Tax=Clostridium difficile RepID=C9XSU0_CLODC Length = 293 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 112/292 (38%), Gaps = 9/292 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F + A SF+K AE+ ++ +A++ IK +E ++V LFTRS R +ELT + Sbjct: 1 MNTKQLEYFISVAENLSFTKTAEKFYISQTAVTQQIKALEEQINVTLFTRSKRHVELTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ F +A ++ + + + G + I + Y + L+ +P Sbjct: 61 GKVFLSEARTIIKNINDAIAKTQQFAHGFFGTLSIG-TLIGYEKNKLQQYLKEFSNTYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + T + + + NN ++A +Y + + P HPL + Sbjct: 120 ISMDICTNEITELLNLVKNNSMDLAFVINPENQPLKDFEYKTVERYSLVALLPPGHPL-Y 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVP-------DFNTKCQCQIL 237 + I +L+ I V++T +K +E+ VP + NT Sbjct: 179 NEDSIDLIELQHDKFIFVKETGDEYGQKSMIQNRYREAGFVPNVVQRSNNLNTIESLVSS 238 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIK 289 GI LP + V + M + + I +++ T + Sbjct: 239 NMGISILPSFCVTDTMIERDIAIVPIKEVENRIEVVVVWNKKNTNPALEKFI 290 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 10/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L AR G+FS+AA+ ++ ++S I+++E L LF R R +LT++ Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F +A +L + A R + + R+ + + + P +L+ ++P Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTI-APYLLPKLIAAFSAKYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ V + + + + +IAI + L + E+ A+ +H L Sbjct: 120 VQVVVHEDTTARLRELTAACEVDIAIAS--LPLQDERFEVRELFDEELLLALPNNHRLVD 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + I L I++++ ++ + + H Q S T G G Sbjct: 178 QKKII-PEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQ-DSRMLLATQHSATGQVTQWIKKQFAP 294 I +P ++E V R + +P + + + G+ K Sbjct: 237 ITLVPRMALQED-RSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B5XWH9_KLEP3 Length = 305 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 112/265 (42%), Gaps = 15/265 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + +L +F A SF +AA LG++ SA+ + R+E L V LF RSTR++ LT Sbjct: 1 MDSLTSLTSFVRTAETLSFVQAARLLGISASAVGKNVARLEHKLGVRLFNRSTRNVSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F + +L + + + ++RI + + Y + L + +P Sbjct: 61 EGAAFLTRCQSILEQIQEAESELTSSLSQPTGKLRISLPVIGY--RLLLPALTAFTRLYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + ++ +I+ ++AI + + L + ++G R+ +P + LA Sbjct: 119 QVELDL---DFSDRLVNLIDEGVDVAIRSGE--LADSRLIARKLGGFRFVLCASPAY-LA 172 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTI-------NKKVGWLLHGQESILVPDFNTKCQCQI 236 P + +L + I + + + ++ + V + + Sbjct: 173 EYGPPDSPKELAAHKCIFFRFPSTGLIQPWELRDMRLTGDFRAASVVTVNNIEAAIRLSA 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTR 261 G GI ++PD++VREAM + L Sbjct: 233 AGMGIAYVPDFVVREAMDEGQLQEV 257 >UniRef50_A5W2P1 Transcriptional regulator, LysR family n=8 Tax=Gammaproteobacteria RepID=A5W2P1_PSEP1 Length = 306 Score = 197 bits (500), Expect = 5e-49, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 117/289 (40%), Gaps = 11/289 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E L+AFT AA GSFS AA +L + S +S I E + LF R+ R L E+ Sbjct: 25 YSPEALVAFTEAASLGSFSAAARKLRKSQSTVSIAIANFEADIGCPLFDRNGRHPTLNEA 84 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +L + ++Q +EA V + ++ Y+ ++ + +P Sbjct: 85 GRQVLSHVEAILEASAQLDALAVRLAQNVEALVSVVMSDS-YSVTFQGAVMTRFAQHYPH 143 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V + I A++ I A + +A +HPLA Sbjct: 144 TELRCGPAEDADVIEMIQQGLAHVGILATQPGYPADVAVARLPEQAEFGVYVASEHPLAS 203 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + + L + ++ A +++ G ++ PD+ T + + G G L Sbjct: 204 LAQ-VQAQHLENARQLYIKTYAPSLHHGRG------QAWSAPDYLTLLEFAVRGFGWAEL 256 Query: 245 PDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQF 292 P +V+ + LV QI PR+ + + A G QW+ +Q Sbjct: 257 PRALVKRFGNE--LVELQIAGYPRRVDMDVAWSSRRALGPAGQWLVRQM 303 >UniRef50_Q47Y42 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q47Y42_COLP3 Length = 302 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 68/312 (21%), Positives = 123/312 (39%), Gaps = 24/312 (7%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 +++ F GSF+ AA+ LG+ + +S + R+E L V L RSTRS LTE+G Sbjct: 4 DLNDMMVFLAVVETGSFTLAADRLGMPKANVSRKVSRLEKNLAVTLLERSTRSQHLTEAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R + + + + + ++I + + + L +Q+P Sbjct: 64 RRYLAHCKRIHEELDLATASVCELFHSYTGELKIGAS-VASGQQVLRPALGKFMRQYPDL 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + + N D I ++ I L+ + ++GAI +P + LA Sbjct: 123 KVQLN--LVNRRVDFIEEG-FDVVIRI--GQLNDSMLIAKKLGAINRKIFASPSY-LAKQ 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKV----------GWLLHGQESILVPDFNTKCQCQ 235 P QL + +++ + NK + + L Q +LV DF+ Q Sbjct: 177 GNPDKVEQLTEHQLLIMNPLNISGNKDLKLPLTSTDHETFTLDCQPRLLVDDFSMLKQAI 236 Query: 236 ILGEGIGFLPDYMVREAMTQSLLV-TRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 + G GIG LPDYM R+ + LV + L +H A + Sbjct: 237 VDGLGIGVLPDYMCRQEVASGQLVNILPDWGMAKVDIYALYPKHRAKIPKVKAFID---- 292 Query: 295 NGILTGIYQDLL 306 ++ +Y ++L Sbjct: 293 --FVSELYGEVL 302 >UniRef50_C0Z947 Transcriptional regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z947_BREBN Length = 297 Score = 196 bits (499), Expect = 7e-49, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 107/263 (40%), Gaps = 9/263 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E + AF A GSFSK A+ L L+ +S IK +ET + LF R+ +I LT+ Sbjct: 1 MNMEQMEAFIFVALTGSFSKTADLLYLSQPTVSMRIKALETTMGCKLFQRTGHTISLTKE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F A ++++ ++ I +E + I + L+Q ++ +P Sbjct: 61 GDLFLPYAKNIMHMLQEGQQAIQRSQGDVEGELTIS-TVFVSAFYILPDLVQQFQQLYPK 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++T+ T + V D ++N++ + I + I+ ++ AI PDHP F Sbjct: 120 IKLTILTGHSHQVLDMVLNHEVSFGIA---RAVTHPQINRIQLMPDDMVLAIYPDHPFGF 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 + ++ ++ I+ + N + L + + + G Sbjct: 177 RHQ-VSIEEVARERLILFNRGSLDWKLINNAFSHFQLQNNVIMEADNIEVVKRMVKQRLG 235 Query: 241 IGFLPDYMVREAMTQSLLVTRQI 263 I FLP + + + + + L + Sbjct: 236 IAFLPRFAISKDLDEGELQEVDV 258 >UniRef50_C1TQZ9 Transcriptional regulator, COG0583 n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQZ9_9BACT Length = 299 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 110/297 (37%), Gaps = 9/297 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F T GSF++ AE L L+ ++S I +E DV+LF R RS+ LT Sbjct: 1 MSLHQLRTFCTLVEEGSFTRTAERLYLSQPSVSQHIATLEKEYDVILFNRRGRSLSLTPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + A D+L +I + + ++ + ++ + T L+ + + P Sbjct: 61 GNALYTLALDVLQRSDSIPGKFREMQAMRYGKLELGVSTYVGT-MVLPSLVAAFRNEHPD 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDT-LLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +T+ T + D + IAI + + + IG + DHPLA Sbjct: 120 VAMTIQTGNDPDIQDMLRRGDIEIAILEGNARTFNDKDLKTFTIGEDHIVLVASKDHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH---GQES-ILVPDFNTKCQCQILGE 239 +P + S L I+ E +L+ GQ V + G Sbjct: 180 ALPS-VTPSHLNEEQLILYEKDCSLCPFVQEYLMEQRVGQHRGTFVNSRDVARAFVKAGV 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G+ F+ V E + + LV+ I ++ + Q + G ++ Sbjct: 239 GVAFINHGTVAEDLKRGDLVSLSIEGLEMKRIDVVCFYRQSTGLGFAGWAFRRILEK 295 >UniRef50_UPI00016945AE hypothetical protein Plarl_07755 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI00016945AE Length = 303 Score = 196 bits (498), Expect = 1e-48, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 119/303 (39%), Gaps = 14/303 (4%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 S +L F R SF+KAA+ L +T IS IK +E L VVL RST+ + L Sbjct: 4 ESELDIRHLKYFIEVVRCKSFTKAADVLHITQPTISKMIKNIEDELGVVLLDRSTKQVML 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T++G+ +A ++ F + + + ++R+ + ++ + ++ + Sbjct: 64 TDAGQSILLQAQQIVKSFENLSIELANTIHLKKGKIRMGLPPMV-GSRFFPHIIGEFHHK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P +I + E V + + +I + + G D + + P H Sbjct: 123 YPNIEIQLIEEGAKKVEEQVEEGHLDIGVVL--LPIPSGTFDSFPFVHEKLMVVVYPKHR 180 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV----PDFNTKCQCQIL 237 LA IA +L P I+ + ++ + V ++ + Sbjct: 181 LAGQT-VIALKKLEHEPFILFREGFVLHDRIPEECIRAGFQPKVVYESSQWDFISEMVAA 239 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQD-SRMLLATQHSATGQVTQ-WI---KKQF 292 G GI LP+ + RE + + ++T + P D S ++ + + WI K++ Sbjct: 240 GLGISMLPESICRE-LNPNRVITIPLVEPSIDWSLAMIWPKEQYISYAVREWINFVKQRL 298 Query: 293 APN 295 P Sbjct: 299 QPK 301 >UniRef50_Q2BQ19 Transcriptional regulator, LysR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ19_9GAMM Length = 298 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 12/277 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++ + F A S+++A +L + + +S +K++E L V L R TR + LTE Sbjct: 1 MSNLDDTVIFNKVAELSSYTQAGLQLNIPKATVSRRVKQLEERLGVKLINRDTRKLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+Y + + LL+ I+ + + +RI + + + ++ KQ P Sbjct: 61 AGQYLYNSTSPLLSQVLEIESSAASFQKHPAGELRITMPVEI-GIRLLNEIICDFAKQHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + N V D I +IAI + +I + R+ +P++ L Sbjct: 120 QIQLDIH--MTNDVVDIIKEG-FDIAIRGGS--PKDSNLIAKKIMSSRFFLCCSPEY-LN 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINK----KVGWLLHGQESILVPDFNTKCQCQILGE 239 P QL+ + I +++ K + ++ + F+ + G Sbjct: 174 EHGRPSHPDQLKQHQLITFPYSSYQQLKLMKGEQEVMVQANNRLSANSFDMLLKAAKKGL 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 GI +P + +A+ LV+ + + D L A Sbjct: 234 GIAIMPTSVCSDALKSGQLVSL-FDDWKTDDIGLFAL 269 >UniRef50_A8ZMF1 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMF1_ACAM1 Length = 311 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 119/315 (37%), Gaps = 18/315 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + N+ F A SF++A+ LGL+TSA+S + R+E L V LF R+TRS+ LT Sbjct: 1 MKSLSNIKTFVRVAEVESFARASNILGLSTSAVSKAVARLEADLGVKLFHRTTRSVSLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F+ LL +F A+ + ++ I + LLQ + +P Sbjct: 61 DGKQFYEGCQQLLLEFDALTAEVQGSRATPRGQLTISAPAA-FGRLCLVPLLQSFMQSYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ + + D +I I L D + + + R +P H LA Sbjct: 120 EITLNISID--DHAIDLAAQG-IDIVIR-TGQLADSANLIASRLVTYRLVVCASP-HYLA 174 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH---------GQESILVPDFNTKCQC 234 EP QL+ + + + + W+L ++ + + + Sbjct: 175 EHGEPQHPEQLQRHSCLNFRNP--DTGRFFPWVLEIDGAVESYTVSGPLVFDNADAVVRS 232 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVT-RQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 I G+ +P ++ +EA+++ LV + P + + + + + Sbjct: 233 SISSLGLSQMPSFLAKEAVSRGQLVEVLNSYQPPETPVWICYLDRNFVSPRIRAFVEFMK 292 Query: 294 PNGILTGIYQDLLHR 308 L R Sbjct: 293 SEKSHLSTMCSLAER 307 >UniRef50_B7H1A2 Bacterial regulatory helix-turn-helix protein, lysR family protein n=18 Tax=Acinetobacter RepID=B7H1A2_ACIB3 Length = 297 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 71/306 (23%), Positives = 123/306 (40%), Gaps = 14/306 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN +E LL F GSFS AA +LG SA+S +I +E L++ LF R R Sbjct: 1 MN--INQEQLLMFQAVMETGSFSAAARKLGKVPSAVSMSIANLEIDLNLTLFERKGREPT 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 T R + K LL + K+ +S G+E + I + L T + +L+ Sbjct: 59 PTAEARVLYEKTAQLLIEMNQWKQHAHALSTGLEPNLTIVVVSELLHTNWT-DYVCLLES 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP QI + + +++ A +A+ LD + E+ I+ H Sbjct: 118 RFPDLQINIVSAPQEDALQMLLDGSAQLALMFEREHLDNRE-QFVELKREALIPVISKTH 176 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA E ++ Q+ I+V T+ + LL + + ++ C + G Sbjct: 177 PLASQ-EHVSYEQILGTRQIVVASRDETLKPE---LLFSKHYWRTDNHHSACLMILRNLG 232 Query: 241 IGFLPDYMVRE--AMTQSLLVTRQIHN--PRQDSRM-LLATQHSATGQVTQWIKKQFAPN 295 G LP M +E + L + + PR + + L+ ++ S G +++ Sbjct: 233 WGVLPQEMFKENPELNN-KLKALDVFDFTPRFEYYVDLVWSRESELGAAARFLIDYIRNK 291 Query: 296 GILTGI 301 + Sbjct: 292 RMQPAP 297 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 11/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F + L F A GSF AAE + L++ A+S I ++ET L LF R+TR +ELT Sbjct: 6 FDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTPL 65 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A L+D + I I+ RV + ++ + +P Sbjct: 66 GRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSAAL-YFLPTVVSNFSQHYPG 124 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V E N V ++++ +++ IG +TL+ I + I + A+ +HPLA Sbjct: 125 IRVRVVDETMNQVLQSVLSGESDFGIGFMNTLV--PEIAFESIHNDPFVLAMRREHPLAR 182 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + + + I V ++ L L+ + V T G G Sbjct: 183 HKS-VNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGLG 241 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATG-QVTQWIKKQFAP 294 + +P + LV + P+ R+ L T+H + + Sbjct: 242 LAAVPRMALASTHA--TLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLRR 294 >UniRef50_A3QAQ4 Transcriptional regulator, LysR family n=1 Tax=Shewanella loihica PV-4 RepID=A3QAQ4_SHELP Length = 290 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 10/292 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSIELT 62 I T E L + A+ GSFS AA+ELG++ +A++ I+ +E L++ LF R + +LT Sbjct: 2 IITTERLQYIVSVAQHGSFSGAAKELGVSVAAVNKAIQHLEFDLELTLFERHGGKKPQLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 + G+ + KA ++L A++R+ +S+GIE+++ IC++ PK+T +L+ L ++ Sbjct: 62 QEGKRLYVKALEILPKLIAMERQAQMMSEGIESQLSICLHPYTCYPKYT-QLIGELAARY 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I + W + Q +I I AP+ L + G++ I I+W AP HPL Sbjct: 121 PDLEINIVEAETLD-WQNL---QCDIII-APNRLANLRGVNIQTISRIKWLLVSAPQHPL 175 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + + +M + + + + + + V F + + G G Sbjct: 176 AQLRSAPELEDFDHHHQLMPPAGNIILPHYLEVMRYSSKLVTVERFYQLRELLLAGCGFA 235 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQ--DSRMLLATQHSATGQVTQWIKKQF 292 P + + + + L +Q + L GQ W +Q Sbjct: 236 MYPQALAQPLIEEGKLKDLNFDYGKQGNHWPIDLIW-QEGLGQAGNWFIEQL 286 >UniRef50_Q6MPF8 Transcriptional regulator, LysR family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MPF8_BDEBA Length = 293 Score = 194 bits (494), Expect = 3e-48, Method: Composition-based stats. Identities = 59/255 (23%), Positives = 114/255 (44%), Gaps = 7/255 (2%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + ++AF A GSFS AA+ LG++ S IS TI +E+ L V LF RSTR ++LT G Sbjct: 1 MQGIIAFVKIADSGSFSAAAQALGVSKSHISKTISLLESDLGVALFVRSTRKVQLTSVGE 60 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F L + + K+ I +S +R+ + ++ ++ A ++ + K++P + Sbjct: 61 RFLETCRQSLQNLDSAKKEILDLSNTPRGVLRVTLAG-IFGEEYIAPVVIDMAKRYPDLK 119 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I + + + V D +I + ++AI L+ + T+I + R + +A L+ P Sbjct: 120 IEL--DFSSRVVD-LIEEKFDVAIRI--GHLENSSLLATKIAS-RVEYVVASKAYLSAAP 173 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 L + I + + + + + + + + + G GI LP Sbjct: 174 SLKEPEDLANHNCIGERSSWSFRKRGKSFHIPVKGNFKCNNPRVLQKAALTGLGIARLPG 233 Query: 247 YMVREAMTQSLLVTR 261 E + + L++ Sbjct: 234 SYAFEDIKKGRLISL 248 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 194 bits (493), Expect = 4e-48, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 108/297 (36%), Gaps = 10/297 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F T AR SFS+AAEEL LT A+S +K++E + LF + + I LT G Sbjct: 49 TLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLTPGG 108 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + ++ F + + ++ + + + RLL + Sbjct: 109 TELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAV--ISAGDYFFPRLLVEFARSHQGV 166 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + ++ G+ + + NN ++AI + APDH L Sbjct: 167 TLNLSVHNREGLLNQLANNLTDLAIMVRP--PTDMDTINEPFAPHPYVIVAAPDHHLVSK 224 Query: 186 PEPIAESQLRLYPNIMVE---DTAHTINKKVGWLLHG-QESILVPDFNTKCQCQILGEGI 241 I S L P ++ E DT H++ G + ++ + T Q I G GI Sbjct: 225 KN-IPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGMGI 283 Query: 242 GFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 FL + + + L + P + ++ ++ V Q + G Sbjct: 284 SFLSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFLLNEGP 340 >UniRef50_A6FDC7 Putative transcriptional regulator with periplasmic binding proteindomain (LysR family) n=1 Tax=Moritella sp. PE36 RepID=A6FDC7_9GAMM Length = 287 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 8/256 (3%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 AF + A GS KAA+ L + SAI ++IK+ME+ L LFT R LTE G Sbjct: 2 WRAFISVAEKGSSVKAAQTLNKSQSAICHSIKKMESILGNALFTIEGRRSVLTELGCSLL 61 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 KA L N+ I+ + + I ++ LL P ++ FP + + Sbjct: 62 PKAQRLQNNALQIEMLASKYQGHLINELNIAVDVLLPHP-FICEVIDRFNLVFPNVSLRI 120 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 +G + ++AI + I + + + + PLA + Sbjct: 121 YETSLSGASALLSTGTVSLAIASN----LPKNIILESLMEVEMLCVCSSESPLATQ-INV 175 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 + L+ Y ++++ D+ + + GW L + V + G G+LP+++ Sbjct: 176 EQEDLKAYRHLIIRDSGNQ-DFDSGW-LGSHNRLTVSSTLMAKHSILKNLGFGWLPEHLA 233 Query: 250 REAMTQSLLVTRQIHN 265 R + Q LVT + Sbjct: 234 RPHLDQGTLVTVDLTK 249 >UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=Chromobacterium group RepID=B9YZ26_9NEIS Length = 318 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 53/283 (18%), Positives = 105/283 (37%), Gaps = 14/283 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + L+ F T A GSFS AA +LG++ +AIS +I R+E L+V LF R+TR + LTE Sbjct: 1 MDTLKALMVFMTTAENGSFSDAARKLGVSPAAISQSIARLEQELEVRLFNRTTRQLTLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR F+ + +N+ A ++ +RI + + L+ ++ P Sbjct: 61 DGRRFYAQCRGPVNNLDAAINQLKASRDEPAGHLRISLPNS-FGRHFILPLMGEFCQRHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + +I + ++ + ++ + + + AP++ + Sbjct: 120 KIRVFF---GLDDHFSDLIEDGYDVGVRV--GMMPDSRLSARHLAQLPLYTVAAPEY-WS 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTI-------NKKVGWLLHGQESILVPDFNTKCQCQI 236 P L + I + L + D C+ Sbjct: 174 KNGRPQKPDDLANHNCINYQFPTSGRLCKWEFERDGERIPLEVNGIYTLNDIEAVCEMAR 233 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 LG G+ +P + + L + + + H Sbjct: 234 LGFGVAQVPGHEAMPYLRSGELEAVLTDFISLERSIYICFPHR 276 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 193 bits (492), Expect = 5e-48, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 119/279 (42%), Gaps = 9/279 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A G+F++AAE+ ++ ++S I ++E L LF R R ELT + Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + +A +L + +R+I + I V++ + + TP ++++ ++++P Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSV-TPYLIPPVIRMCRERYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + + D + +AI + D ID I A++ H LA Sbjct: 120 LEINIQENLRRRLIDEVQQGHLEVAISS--YTGDAANIDAEPILQEDLVLAVSKTHRLAT 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 ++ + P +++ ++A +K + + + L + + LG G Sbjct: 178 QKSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 + LP M +E +V R + + R R+L A HS Sbjct: 238 VAILPA-MAKEEHLPFEIVYRSLVSERM-KRLLFALTHS 274 >UniRef50_C6D9I6 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=C6D9I6_PECCP Length = 310 Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 121/293 (41%), Gaps = 23/293 (7%) Query: 2 NSIFTEENL---LAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRS 58 +S+ T ++L AF T A+ GSF+ AAE LGLT SA+ ++ R+E L + LF RSTR Sbjct: 6 SSMRTTDHLGGINAFVTTAQQGSFTAAAERLGLTKSAVGKSVSRLEDRLGLKLFQRSTRR 65 Query: 59 IELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVL 118 + LT G F ++ + + + R+R+ + + LL + Sbjct: 66 LSLTPDGERFLASCQSAMDILEQAEAELTSHLCQPAGRLRVDLPAAFGRQRILPILLN-I 124 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 +++P +TVT D I + ++ I + L D G+ + + +P Sbjct: 125 TRRYPELALTVTF--SERFVDPIEDG-IDLVIRIGE-LADSSGLVARRLTTQKLVICASP 180 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL---HGQESILVP-------DF 228 D+ L EP++ L + ++ N+ + WLL GQ + P D Sbjct: 181 DYLL-NQGEPVSVEALSQHHCVV----GFRRNQPISWLLKDDTGQIARYTPPATHEFADG 235 Query: 229 NTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT 281 + + G G+ LP ++V + + L + + + + S Sbjct: 236 DAMLAAVLAGCGLSQLPRWLVGKYLESGELKEVLVSHAGGEMPISALWPKSRQ 288 >UniRef50_B2I2G0 Transcriptional regulator n=17 Tax=Acinetobacter RepID=B2I2G0_ACIBC Length = 300 Score = 193 bits (491), Expect = 6e-48, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 10/259 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L+AF T GSF AAE L T S +S ++ R+E LDV L R+TR ++LT+ G Sbjct: 4 TIEELVAFITIVDTGSFVAAAEHLKQTPSGVSRSLTRLEAKLDVTLLERTTRKLKLTQEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + F KA +LN+ A + + QG +R+ + + A L+ ++ +P Sbjct: 64 QQFLIKARKILNELNAAEEELQKSDQGTAGLIRVD-SATPFVLHVIAPLMHKFRECYPDI 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + N ++ ++ ++A + L+ + + R +PD+ LA Sbjct: 123 EIEL---NSNDQVIDLLQHKTDVAFRFGE--LNDSSLHAKLVCKSRLYIVASPDY-LALK 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKV---GWLLHGQESILVPDFNTKCQCQILGEGIG 242 P +L + I + + + Q I T Q I G GI Sbjct: 177 GTPTQPEELEQHDLIGFTRPTYINSWPIKVGDEYFFAQSKIKASSGETVRQLTIRGHGIA 236 Query: 243 FLPDYMVREAMTQSLLVTR 261 L ++ + + M + L+ Sbjct: 237 RLSEFEIWKDMEEGRLIAL 255 >UniRef50_A5EG89 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=A5EG89_BRASB Length = 329 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 116/281 (41%), Gaps = 14/281 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF A SF+KAA ++G + IS+TIK +E LDV LF R+TRS+ LTE+G Sbjct: 9 LSAFAAVADTLSFTKAAAQIGCSLPTISHTIKSLEERLDVRLFNRTTRSVALTEAGERLL 68 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + + I+ +RI + + ++ + L++ ++P Q+ + Sbjct: 69 AEIQPIFEQVDQAIESINAFRDKPVGTLRIAVPR-VFAIRGLGPLIRSFLAEYPDIQLEL 127 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + N I+ N+ + I + + + + +++ +PD+ LA P P Sbjct: 128 AVDDTNS---DIVRNRFDAGIRSGHRVERDMKVI-RVVDDLQFVAVASPDY-LAVHPAPS 182 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQE-------SILVPDFNTKCQCQILGEGIG 242 + L + I A + + Q S++V DF+ + G GI Sbjct: 183 SPEDLGAHNCIRHRFPADETLQPWVFEQGEQRAEIAVDGSLIVNDFDLALNAALDGVGIA 242 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ 283 +L + +V + + LV R + + + L S Sbjct: 243 YLVEPLVDAHLAEGRLV-RVLPDWSSATPGLFLYHPSRRQP 282 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 106/295 (35%), Gaps = 11/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L+ F G F++A +GL+ A++ + +E L L RS R I LT + Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +A ++ +K + ++ R+ I + + +L K++ P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTVGL-RLLPPILAAFKREHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V + ++ + +AI T + + + AP + Sbjct: 120 IRVHVKADRTQETIQRLLEGEIELAI--LPTPVTHPRLRSVPLVEDPVVLVCAPGRR-SE 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 +P+P+ ++L I + + L ++ ++ G G Sbjct: 177 LPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATG--QVTQWIKKQF 292 +P V + +V ++ PR LA +H G T+ + + Sbjct: 237 CALVPASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMI 291 >UniRef50_A6VZK8 Transcriptional regulator, LysR family n=1 Tax=Marinomonas sp. MWYL1 RepID=A6VZK8_MARMS Length = 313 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 125/300 (41%), Gaps = 21/300 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN +T + LLAF TAA GSFS AA +L S IS I +E L LF RS++ Sbjct: 20 MN--WTLDQLLAFVTAAELGSFSAAARQLQKAQSRISSAISNLELDLGFELFDRSSKFPV 77 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G+ +A +LN + R + + +RI +++ L + + Sbjct: 78 LTPLGKEMLPEARAVLNQCLRLDSRALSAANKEPISLRIALDEALPLET-IHSIFSQVGD 136 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FP + +T + + AI N +A+I ++ L + +G + + H Sbjct: 137 LFPNTHLVITNGSQDDIAIAIANQRADIGFMISNSALP-PKLISQSLGYFKKILIVGKKH 195 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + ++ SQL+ Y ++ + + + + + + C+ +G Sbjct: 196 PLAQEDQ-LSLSQLQQYRQFVLCNRSGENRENA----LSPDHWDLDSYYLICELVTQNQG 250 Query: 241 IGFLPDYMVREA-------MTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 +P+++ + + + +S +T Q+ R+ S ++T WI +Q Sbjct: 251 WAIVPEHIAKASWFYEQIKIAKSDFLTNQLIEVGIVKRL-----DSPNNKLTDWITEQMR 305 >UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marinobacter algicola DG893 RepID=A6EVZ7_9ALTE Length = 304 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 113/273 (41%), Gaps = 14/273 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + F+T GSFSKAA LT SA S I R+E L L RSTR ++LT GR Sbjct: 9 LAAMEIFSTVVEQGSFSKAARVCRLTPSAASKAITRLEKRLGTKLIHRSTRQMQLTAEGR 68 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 +F+ + +L+D ++ + S +RI + ++ ++P Sbjct: 69 WFYERCRHILSDLEEAEQGASS-SVEPTGHLRITAS-FPVGHGFLIPIVTKFLARYPGIT 126 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + ++ ++ ++AI + L + ++G R AP++ L Sbjct: 127 LELS---LTDQVVNLLAEHTDVAIR--NGPLGNSNLVARKLGETRMVIVGAPEY-LERRG 180 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGW-----LLHGQESILVPDFNTKCQCQILGEGI 241 P+ +LR + + + HT + + L Q S+LV D T + + G G+ Sbjct: 181 VPVTLEELRTHNRLGFNFSRHTATWPLTFDGEQTELAPQGSLLVSDGETMRKMAMEGVGL 240 Query: 242 GFLPDYMVREAMTQSLLV-TRQIHNPRQDSRML 273 L ++V E + Q LV + HNP + Sbjct: 241 ARLTRFLVDEDIRQGRLVPVMEEHNPGDREEVH 273 >UniRef50_B4SME3 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=B4SME3_STRM5 Length = 314 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 111/293 (37%), Gaps = 19/293 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + LLAF A GS AA LGL+ SA+ I R+E L LF R+TR + Sbjct: 1 MPRMDSISTLLAFVRTAEAGSIVGAARVLGLSASAVGKRIARLEQELGTRLFQRTTRRVH 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT+ G ++ L++ + + +RI + + Y + +L ++ Sbjct: 61 LTDEGELLLQRCRRALDELSEAQADLAQRQHAPSGLLRIGLPTIGY--RFLLPVLPGFQQ 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P Q+ + +N +++ + I + + L + +G R+ + AP + Sbjct: 119 RYPQVQLEL---DFNDRIVDVVSEGLDAVIRSGE--LADSSLTARRLGGFRFILSAAPGY 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG---------QESILVPDFNTK 231 L P S+LRL+ + T K W L G ++ + Sbjct: 174 -LQAHGTPGDVSELRLHTALRFRYP--TTGKLHPWQLPGIEGDAGARLPTAMTCNNMEAV 230 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV 284 I G+ ++PD++ +A+ L P + L Sbjct: 231 LAAAIGCMGLAWMPDFLAADALADGRLQRVLPALPTHQGQFSLLWPGGRHPSA 283 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 48/286 (16%), Positives = 100/286 (34%), Gaps = 12/286 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +L F GSFS A + L L+ SA+S + ++E L V L R+TR + LTE Sbjct: 1 MNDFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++ A L + + + + + +R+ + + +H + LL + ++P Sbjct: 61 AGSDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAP-MAFGLRHISPLLPIFLHRYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + + V D + ++A+ L + + APD+ L Sbjct: 120 EVSVDLLMD--DRVVDLVGEG-FDLAVRI--GQLPDSSLIARRLAPCFSVLCAAPDY-LQ 173 Query: 184 FVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L+ + + + + + G Sbjct: 174 RTDVPQHIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV 284 GI +P ++V A+++ LV + + Sbjct: 234 VGICQVPKFIVGPALSEGRLVEVLPQYRLPEHSIYAVYPERRHLPA 279 >UniRef50_C9PA71 Transcriptional regulators LysR family n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PA71_VIBFU Length = 298 Score = 193 bits (490), Expect = 8e-48, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 123/296 (41%), Gaps = 12/296 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F + A+ SF+K AE+ ++ +AIS IK +E L V L R+ R +ELT + Sbjct: 1 MNIKQLEYFLSVAQLKSFTKTAEQFFISQTAISQQIKALEHELGVTLLHRNNRIVELTAA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F+ A +++N+ +A K R+ + GI+ + + + + A +L K+ P Sbjct: 61 GEVFYSDAKNIINNIHASKERVANAAMGIQGSLNVGFLPM-HGDTLLADILGDFYKKNPL 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + ++ A+ + Q ++ L + IDY + I + H L+ Sbjct: 120 IEINIADDNITQLYKALFDGQLDVIFTIDYELENYPSIDYLNLPPIPLYAVVNKTHRLSN 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAH---TINKKVGWLLHGQ----ESILVPDFNTKCQCQIL 237 + + L I++ + + +++ + GQ VP F Sbjct: 180 LKS-LPIDLLSEEAFIVISYSNNLPYGVDRLIKICDSGQFVPKIKHKVPSFEAALVMVEA 238 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G G+ LP+Y R T +V I ++ + ++A + +Q Sbjct: 239 GLGVAVLPNYN-RHHHTN--VVYIPIEQCQEHVKPIVAWNTESLNPTLNLFLRQLK 291 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 62/305 (20%), Positives = 117/305 (38%), Gaps = 11/305 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + L AF A SFS AA+ L +T A+S I +E L+ +LF R R + Sbjct: 1 MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +A +LN + +R I S I +R+ + + H +L+ Sbjct: 61 LTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHIGL-HHLPPILREFAA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + + ++ ++A+ L+ ++ + + F + +H Sbjct: 120 NHKQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTLE-ENLEASVLWPDPLCFIVGANH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQI 236 PLA I+ +L P I+ + +T + L ++ T Sbjct: 179 PLATSKN-ISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVT 237 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 +G G LP MV ++ +L + I RQ ++ + G + + + N Sbjct: 238 VGLGWSVLPKTMVDSSLK--ILPIKNIQLERQLGVVIH--KKRTLGNAARAFFEVLSANS 293 Query: 297 ILTGI 301 + I Sbjct: 294 QIKQI 298 >UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMW5_9RHIZ Length = 313 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 13/283 (4%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 N++ LLAF A GSF A LG++ SA+ ++ R+E L V L RSTR + L Sbjct: 17 NAMDRLNGLLAFARTAELGSFIAAGRALGISASAVGKSVARLEQELGVRLLQRSTRRVGL 76 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE GR F + +L+D + + + R+RI + Y +L + Sbjct: 77 TEEGRLFDERVRRILDDIDDAEAMLSRTRETPRGRLRISTPIVTY--HLLLPVLSEFMAR 134 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P ++ + +N +I ++AI + + L + + R AP + Sbjct: 135 YPEIELDI---DFNDRVVDVIEEGIDVAIRSGE--LPDSRLVSRPVAPFRMLLCAAPSY- 188 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-----ILVPDFNTKCQCQI 236 L P + L + I + E + + + Sbjct: 189 LDRHGTPSVPADLIRHFGINFRFLNSGRLLDWPFTTGSAEPQIRSMLTCNNMEALKGATL 248 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 G GI +PD++VREA+ S L + + + + Sbjct: 249 AGLGIACMPDFLVREALHDSKLRIVLDDHVDGRGQFRMLWPSN 291 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 113/294 (38%), Gaps = 12/294 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L AF A SF+KAA +L ++ A+S+ IK +E L V LF R + + LTE+ Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +A +L + IK +D + + + + + + L+ K+++P Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGAST-IPGEYLLPLLIGKFKEKYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +IT+ V + + ++ I ++G ++ + + P H A Sbjct: 120 IKITLKVSGSGQVGQWVREREIDLGITG--AFIEGESLECRPWIDDQLVLIVNPSHRWAS 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTKCQCQIL 237 + + S+L+ P IM E + T L + + + Sbjct: 178 LGA-VQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKK 290 G G+ + Y REA+ + Q+ S + + G + + Sbjct: 237 GLGVSIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHKQGIEGFAIRAFTE 290 >UniRef50_B8KMT5 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KMT5_9GAMM Length = 300 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 65/299 (21%), Positives = 121/299 (40%), Gaps = 15/299 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 ++AF+ AR GSF++AA L L+ A+S IK +E L LF R+TRS+ LT G+ Sbjct: 5 INQVMAFSAVARTGSFAEAALRLHLSQPALSIAIKNLEEALGGKLFARTTRSVTLTPEGK 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F+ A LL+D+ + + ++ I YT ++L +Q+P Sbjct: 65 AFYPVARRLLSDWEQSLQDVRNHFSLRRGKLDIAAMP-TYTINLLPKILASFHRQYPNIN 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 +TV + V + + ++ + + D + + + R+ HPL Sbjct: 124 VTVHDVIAESVVEMVREHRCELGVTFDPD--DSPDLTFQPLFIDRFIAIFPKQHPLLGKG 181 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKC-----QCQILGEGI 241 + L YP+I ++ A T ++ L + + P F + + G G+ Sbjct: 182 S-LRWRDLLDYPHISLQKPAGT-RARIDQTLAKKGLRITPAFESHQLVSIGRMVREGLGL 239 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQW---IKKQFAPNG 296 +P R M + L R I P ++ ++ + Q + ++ +P Sbjct: 240 SVVPSTS-RAQMKEMGLECRAIAFPVITHQLGVITRRQQTLSVAAQAMASLIREMSPGK 297 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 54/281 (19%), Positives = 107/281 (38%), Gaps = 7/281 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A GS S AE L ++ A++ I+ +E LD+ LF R R ++LTE Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ A + A +R + +Q + + + + L L+ + P Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATL-GAYLLPPLISRFRALHPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +++ V + + + I++G + D+ + +AP HPLA Sbjct: 120 IFVSLEVSNTEAVTRQLDDGR--ISLGFVEGPFAQADYDHRLLARDALLPVVAPRHPLAR 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 P+ S+L+ YP M E + L + + + + G+G Sbjct: 178 TAAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKRLLADGQG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT 281 I +L +V + L + + + + + + + A+ Sbjct: 238 IAWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGAS 278 >UniRef50_Q6DB33 LysR-family transcriptional regulator n=2 Tax=Pectobacterium RepID=Q6DB33_ERWCT Length = 290 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 116/297 (39%), Gaps = 16/297 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + T E G +++AA L + S++SY + ++ L + L T R E Sbjct: 1 MQAKTTLEQWEILQAVIDLGGYTQAANVLHRSQSSVSYQLSLLQERLGIELLTIHGRKAE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G +A ++ F+A++ R ++ G +A + + ++ + LL +K Sbjct: 61 LTPEGENLLAQARSVIRSFHALEARAHSLKMGEQASINLVVDS-TFPKDRLFHLLSTFQK 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q P +I +T + N + A+I I T + G + + + H Sbjct: 120 QHPATRIHLTEVLRNETSAQLKARDADIYII---TQREIDGCAGRWLMNVDFVAVAHSHH 176 Query: 181 PLAFVPEPIAESQLRLYPN--IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 PL +P P++ L YP I++ H+ ES F Q + Sbjct: 177 PLFSLPTPLSHEALSRYPCVEIVMRTPPHSQP-------ASAESWTFTTFEAATQAVLHQ 229 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQI-HNPRQDSRMLLAT--QHSATGQVTQWIKKQF 292 G G+LP+ + E +T+ L + R+ + + L + G+ + + Sbjct: 230 VGYGWLPEARISEHITRGELHILPLQQGERRTTPLYLLAEEKGQPLGKEIIMLIELL 286 >UniRef50_A0RKW5 Transcriptional regulator, LysR family n=81 Tax=Bacillus RepID=A0RKW5_BACAH Length = 306 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 106/276 (38%), Gaps = 8/276 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F T FS+AAE L L+ +S I+ +E L RS + +++TE+ Sbjct: 10 MNVDILKIFVTVVEQKHFSRAAELLNLSQPGVSMHIRNLENEFGTTLIQRSPKHVQVTEA 69 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + A +L+ + K++I+ + + +RI + ++L + P Sbjct: 70 GNILYIHAKQMLSLYEDAKQKINELHNVVTGTLRIGAS-FTIGEYLLPKILANYANENPH 128 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V ++ +NQ +I + + + +D + P+HPL Sbjct: 129 VEVHTFISNTEDVLQSLRSNQIDIGLV--EGQVVYADVDVETFMQDEMKLVVPPNHPLLR 186 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 E + ES L+ ++ E + T ++ L + + + G G Sbjct: 187 TNE-MNESTLQDQVWVLRESGSGTRAYSDRFIHQHHLKMKRFFTFSSIQSVKEAVSAGLG 245 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 I L D+ VR+ + L ++ N + + Sbjct: 246 IAILSDWTVRKELLAKELFHVEVPNEQLIRPFSIVR 281 >UniRef50_A4SRE3 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=A4SRE3_AERS4 Length = 299 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 70/301 (23%), Positives = 128/301 (42%), Gaps = 13/301 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN + E L AA+ GSFS AA +LG S +S I +E L + LF RS R Sbjct: 1 MNP--SLEQLRVLLAAAQAGSFSAAARQLGKAQSVVSTAIANLEIDLGLELFDRSARYPV 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G ++AT LL ++ ++ G+E+R+ + I+ + P LL+ Sbjct: 59 LTEAGTRIHQEATILLAQSERLQAIAGELAAGVESRLTLAIDDDSHLP-WLGSLLEEFAT 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P ++ + + V + + + +A + I + + +G+++ ++PDH Sbjct: 118 RYPGVELELLFPLMEDVTELLKSGRAQLGISYQKERPE-RELASCSLGSVKMPLVVSPDH 176 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTK-----CQCQ 235 PLA P+ ES L+ +MV ++ + L Q + D + Sbjct: 177 PLAR-KTPLRESDLQGARQLMVTGR-REGTERHRFRLSAQVWWVEGDLGILELVKLVKLV 234 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM--LLATQHSATGQVTQWIKKQFA 293 LG G +PD+++ + + +V L + GQ +W+K+ Sbjct: 235 KLGLGWASVPDFLLHRPLARGEVVVLNPDFIALAELALELQWYRARPLGQAGRWLKEALL 294 Query: 294 P 294 Sbjct: 295 A 295 >UniRef50_A1JP38 LysR family transcription regulatory protein n=4 Tax=Proteobacteria RepID=A1JP38_YERE8 Length = 303 Score = 192 bits (488), Expect = 1e-47, Method: Composition-based stats. Identities = 65/307 (21%), Positives = 122/307 (39%), Gaps = 21/307 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + AF T A+ GSF+ AAE LGLT SA+ ++ R+E L + LF RSTR + Sbjct: 1 MRKTDHLGGITAFVTTAQHGSFTAAAERLGLTKSAVGKSVSRLEDRLGLKLFQRSTRRLS 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F ++ + + R+R+ + + LL + + Sbjct: 61 LTPDGEKFLASCQSAIDILELAEAELTAHITHPAGRLRVDLPAAFGRQRVLPILL-DITR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q+P +TVT ++ + +I ++ I + L D G+ + + +P++ Sbjct: 120 QYPELTLTVT---FSERFVDLIEEGIDLVIRIGE-LADSSGLVARRLTTQKLVICASPEY 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL---HGQESILVP-------DFNT 230 L EP+ +L + ++ N+ + WLL GQ P D + Sbjct: 176 LLHNA-EPVQPEELSQHKCVV----GFRRNQPISWLLKDNTGQIHRYTPTPTHEFADGDA 230 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIK 289 + G G+ LP ++V + + L I + + + L ++ +++ Sbjct: 231 MLAATLAGCGLCQLPLWLVGKYLQSGGLKEVLIGHSGGEMPVSALWPKNRQLLPKIRYVV 290 Query: 290 KQFAPNG 296 + Sbjct: 291 DELVRAA 297 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 6/278 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F AR SF +AA EL S +S I +ET L V LF R R + LTE+ Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + A L++ + + S+ + + + + + L ++ +++ P Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESR-LRGLLTVRVPESLCA-YRLPPVIAAFRRRHPE 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + +T NG+ + ++A D+ + GG ++ +G AP HPLA Sbjct: 119 VALHLTACTLNGLEKDLRQGITDLAFVMADS-VRGGDLNVEALGVEPLVLVAAPHHPLAA 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES---ILVPDFNTKCQCQILGEGI 241 +A + + D A+ + G + + + C G GI Sbjct: 178 RDRVVARDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVGI 237 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 LP+ VR+ + L + ++ +L+ Sbjct: 238 TLLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRG 275 >UniRef50_A5WE98 Transcriptional regulator, LysR family n=2 Tax=Psychrobacter RepID=A5WE98_PSYWF Length = 321 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 128/299 (42%), Gaps = 17/299 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN T L AF A GSF++A++++ LT SA+S IK +E L+VVLF R+TR + Sbjct: 1 MN--ITLRQLNAFIHVAETGSFTRASDKMHLTQSAVSGLIKELENTLNVVLFDRTTRQLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L+ G + +A +LN+ + +++ + VR+ ++Q + ++ K Sbjct: 59 LSVVGHHLLPQARRVLNELTLFENEASSLTSLAQGTVRLAVSQ--FAASSMPAVIAQFAK 116 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAP-DTLLDGGGIDYTEIGAIRWAFAIAPD 179 +P ++++ V I N + ++ +G +T + + + + + + Sbjct: 117 LYPEIKVSLLDCSAEDVLQHIENIEVDLGVGVELNTDQNDENLSADLLYELPFCIVLPQA 176 Query: 180 HPLAFVPEPIAESQLRLYPNIMVE----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 HPLA P + L P I + D + L + V +T + Sbjct: 177 HPLACEP-VVKWDDLLGLPLITLNGPFIDHVTLELSEPMALQIKNAAYKVNFMSTALEMT 235 Query: 236 ILGEGIG----FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIK 289 G G+ ++P+ V + ++ + LV + + P + + + + A ++ K Sbjct: 236 RQGFGVTLCLPYMPE--VIDWISANNLVLKCLAEPVKLRKFYIYQRSSRALSPASKTFK 292 >UniRef50_Q5WIP7 LysR family transcriptional regulator n=2 Tax=Bacillus RepID=Q5WIP7_BACSK Length = 293 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 110/297 (37%), Gaps = 9/297 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E+ F T A+ +FSKAA L +T ++S+ IK++ET L V LF R ++ + LT Sbjct: 1 MTNLEHYRIFYTTAKEQNFSKAASSLFITQPSVSHAIKQLETQLGVSLFIRHSKGVFLTT 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G + +R + ++ + I + + R+ K++P Sbjct: 61 EGNVLYSYIKQAFAHIETGERHLQSLKALESGSITIASSDSICKHYLLPRV-PSFLKRWP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + + + +I I ++ ++ T + F +P + Sbjct: 120 KLDIKFQHGSTPDIMKKLEQGRIDIGIV--HLPINEKDVEITPFTSTTCLFCASPTYK-T 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES----ILVPDFNTKCQCQILGE 239 + ++L YP + + T + ++ + V +C LG Sbjct: 177 LHNGTHSLTELTRYPLVSFSAGSSTRSFLERLFQQQGQTFSPELEVGSIELLIECAKLGM 236 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQFAPN 295 GIGF+ ++++ + Q LV + + L T+ +A + N Sbjct: 237 GIGFVAKELIKKELEQGELVEIPVDIAIPTREIALITKKAAPLSIAARRFYSHLLAN 293 >UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=Gammaproteobacteria RepID=B7H4B0_ACIB3 Length = 303 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 62/276 (22%), Positives = 106/276 (38%), Gaps = 12/276 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + F T GSF KAAE+L LT SAIS I R+E L V LF R+TRS+ +T+ G Sbjct: 5 LSAISIFVTVVEAGSFVKAAEQLHLTRSAISKNIARLEDQLGVALFKRTTRSLSMTDEGA 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F+ + L++ +D R+R+ + +L+ A L+ +Q Q Sbjct: 65 LFYEHSRRALSEIQNAAALLDQRKINATGRLRMSVP-VLFGQLFAAPLMVKFAQQHADLQ 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + ++ +N +I ++ I L D + IG R +PD+ L Sbjct: 124 LEIS---FNDRNVDLIEEGFDLCIRI-GALPDTTQLVAKPIGEHRMLLCASPDY-LNKAG 178 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKV------GWLLHGQESILVPDFNTKCQCQILGEG 240 L + I ++ + + +L+ D + G Sbjct: 179 PVEHIEDLDQHATIADPHFGQMQKWRLQKENDEPLFIKPKAKLLLNDLQAIKNAALADAG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 I +LPD++++ + LV + L Sbjct: 239 IAWLPDWLIQNELQDGKLVQVLDAMSSTAFPIHLVW 274 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 68/300 (22%), Positives = 124/300 (41%), Gaps = 12/300 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN + L AF T A+ SF++A+E L L+ A+S IK ME LF+RSTRS++ Sbjct: 21 MN--VSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQ 78 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L+ GR F A LL D+ + + ++R+ + + L ++ Sbjct: 79 LSPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPS-FAMNQFPEALAPFQR 137 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P I+V V V DA+ Q + I +D G+++T + RW + P Sbjct: 138 EYPDINISVEDVVMESVIDAVREGQVELGITFEPDQMD--GLEFTPLFTDRWIALVHPKS 195 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ----ESILVPDFNTKCQCQI 236 PLA + ++ + L P I + + + N L + T + Sbjct: 196 PLAARKK-LSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVS 254 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPN 295 +G G +P + R+ M ++ + I P + ++ + + + Q + + Sbjct: 255 VGLGTAVVPQ-LCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEH 313 >UniRef50_A3RXY4 Transcriptional regulators, LysR family n=5 Tax=Proteobacteria RepID=A3RXY4_RALSO Length = 336 Score = 191 bits (486), Expect = 2e-47, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 20/280 (7%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + + F A G F++AAE L L+ SA+ +I R+ET L V LF R+TR+ LTE G+ Sbjct: 9 LDGVAVFVEAVEAGGFARAAERLALSRSAVGKSIARLETRLGVRLFHRTTRTQNLTEDGQ 68 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 ++ + + + + +++ Q + R+R+ + +L+ A +L ++ P + Sbjct: 69 IYYERCLRAIEELRVAESLLESGKQEVAGRLRMTMP-VLFGRYCIAPILLDFAREHPKLE 127 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + ++ + D I ++ I + L + G+ + APD+ L Sbjct: 128 LELSF--SDRPVDMIAEG-FDLGIRS-GALGEATGLCARPLATQPKVLCAAPDY-LKARG 182 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE----------SILVPDFNTKCQCQI 236 EP L + ++ T H WLL G + + D + Sbjct: 183 EPDTIETLATHDVLIHWRTGHPYP----WLLPGADGRLTEVRLASRLRFDDLEVTADAAV 238 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 G GI +LP ++VR+ + LV P Sbjct: 239 AGMGIAWLPHWLVRDRIQAGALVALWEKRPAASMDSHAIW 278 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 69/310 (22%), Positives = 117/310 (37%), Gaps = 16/310 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN E+L AF A SF AA+ + L+ A++ I+++E L V L R+TR + Sbjct: 14 MN--IDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVS 71 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT GR F +A +L+D + I++ V I ++ + Sbjct: 72 LTAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIP-TAAYYFLPDVISAFTE 130 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP + + N V +I+N +A+ I D + + + + A DH Sbjct: 131 EFPAIRFRIFDAGANEVLQSILNREADFGITL--LGADDPDVTFDPLIEEPFLLACRRDH 188 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQI 236 PLA E + + L + + V T+ L + + V +T Sbjct: 189 PLARQ-ESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVE 247 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLL-----ATQHSATGQVTQWIKKQ 291 G G+ LP M A +VT + PR + + A + A Q Q + + Sbjct: 248 AGLGVAALPR-MALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQMLLSR 306 Query: 292 FAPNGILTGI 301 + N Sbjct: 307 WRDNAGPAAP 316 >UniRef50_A0KPQ5 Transcriptional regulator n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KPQ5_AERHH Length = 307 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 15/298 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN FT + F A S S+AA EL ++ SA++ I+ +ET L LF R+ R + Sbjct: 1 MN--FTFRQIRYFVAVADSFSVSRAAAELHISQSAVTSAIRELETELGAALFERNPRGVS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F A +L + + ++Q + R+ I + L+ + + L ++ Sbjct: 59 LTTQGHQFLLHARRILGAMTEAGQSLKAVAQQDQGRLTIGVTTLVAG-YYLSEALGRFRR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FP QI V + + I+N + ++ I + + D + +A +H Sbjct: 118 AFPAVQIEVKEDEQPYLEHQIVNGEVDVGILMTNRTIRQEAFDTELLTRSPLRVWLAANH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH-----GQESILVPDFNTKCQCQ 235 PL ++ L P I + TA +++ +G L + + Sbjct: 178 PLC-AESTLSLKALGEEPMISL--TADQLDQIIGGGLRRYGIAPRIVLRTASVEAVRSLV 234 Query: 236 ILGEGIGFLPDYMVRE-AMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G+ LPD+ R ++ Q + R I P + L + + +W ++F Sbjct: 235 ASQLGLALLPDFAYRPWSLEQERVEARAIKEPIPAIDIGLVWRRGSR---LEWTAREF 289 >UniRef50_Q7NCX0 LysR family transcriptional regulatory protein n=1 Tax=Gloeobacter violaceus RepID=Q7NCX0_GLOVI Length = 301 Score = 190 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 113/293 (38%), Gaps = 13/293 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E L F A +F++AAE+L L+ A+S + +ET V LF R R IELT S Sbjct: 1 MNFEQLRVFVAVAEHLNFTRAAEKLSLSQPAVSSAVAALETYYKVPLFNRMGRRIELTNS 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +A ++ + I+ ++ + I +Q + LQ ++Q+P Sbjct: 61 GQLLLTEAHKVIQEITTIESKLRETKSLQRGELYIGSSQTV-ASWWLPPQLQRFRQQYPK 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ V + + + + Q +I + + + + + IG + AF + HPL + Sbjct: 120 VQLKVVSGNTEEIGEWVAAGQVDIGLV--EREVRNKSLTFNAIGGDKMAFVVGKQHPL-W 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTKCQCQIL 237 I +L+ ++ E + ++ +P+ + + Sbjct: 177 ERTNIGLDELKSTRWVLRESGSDVRKFFEYLCFTHNIDADKLDIALELPNCAMTKRAAEV 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQ--IHNPRQDSRMLLATQHSATGQVTQWI 288 G G+ L +V + + L + + + + L++ T + Sbjct: 237 GAGVALLSVPLVEKEIKWGALRSLNTVLKPVMERNFYLISRNSQVTSPAVKAF 289 >UniRef50_C9P545 Putative transcriptional regulator n=2 Tax=Vibrio RepID=C9P545_VIBME Length = 296 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 5/247 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F+ + L AF GSFS AA ELG S IS I ME V LF RS R +LT Sbjct: 1 MFSIDQLRAFVKTVETGSFSSAARELGKAQSVISQHIINMELDCGVDLFDRSGRYPKLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G A L + + + ++ + +++ + K L+ L++ FP Sbjct: 61 KGEELMPYAQATLIQLARMSSKASQLYTPDANQLILAMDEGIPLAK-LPIALRQLEQAFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + + + +A + + L +D+ +G I + +A HPLA Sbjct: 120 HLQVECLMASSRDIIELVESGRATTGLILSEPDLPTC-LDFFSLGHIAFDVFVAKHHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 +P +LR Y + V + + ++ T + + G G F Sbjct: 179 NIP-ITHIDELRQYRQLTVRSKNSQFSSLNQAF--SPDIWYTDNYYTVLELAVNGFGWSF 235 Query: 244 LPDYMVR 250 LP+++ + Sbjct: 236 LPNHLAQ 242 >UniRef50_Q4KEU3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas RepID=Q4KEU3_PSEF5 Length = 305 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 121/306 (39%), Gaps = 15/306 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F T A F +AA L L ++ I +ET L LF R++R++ LT Sbjct: 1 MLDLRKLRYFLTVAEELHFGRAALRLHLAQPPLTRQISALETELGFRLFDRTSRTVTLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR+F A +L + ++ G ++ + + ++ +Q ++FP Sbjct: 61 QGRHFLPYARAVLEQVDLAQVMAGKLAAGCAGQLALGYASSIALSDLFSQAIQAFAQRFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+T+ W I++ + +I + + I +G AI+ D PLA Sbjct: 121 DVQLTLVEGASVSQWSQIVDGRIDIGMSRMQPPSEQSDIQSLSLGDEPLVAAISSDSPLA 180 Query: 184 FVPEPIAESQLRLYPNIMV-EDTAHTINKKVGWLLHGQESILVP-----DFNTKCQCQIL 237 + + ++L +P I+ D +N+ + L L P + Sbjct: 181 AQAQ-VTLAELSEHPLILFPADYGSGLNEAIEQLYRRNGLPLRPGPSGRQITSIIALVAA 239 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 G+GI +P + + + + R + +P +++L+ T+ Q+ + G+ Sbjct: 240 GQGIALVPR--CTQTLAKKGVTYRPLADPSATAQLLVLTRKQGRSQLVEAF------MGV 291 Query: 298 LTGIYQ 303 L + Q Sbjct: 292 LDELLQ 297 >UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8HAD2_SHEPA Length = 304 Score = 190 bits (483), Expect = 5e-47, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 103/264 (39%), Gaps = 12/264 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + F A FS AA LG++ SA+S I ++E L LF RSTR++ LTE Sbjct: 1 MDTFNAIPIFVAVADSAGFSSAARVLGISKSAVSKRITQLEQQLGARLFYRSTRNLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +++ A+ + + + + ++I + + H A L+ +++P Sbjct: 61 AGERYYQYASQANRAAKQAEDAVSELQGEPKGLLKIQVP-MTIGQMHLASLIPEFIERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 QI + V + +I ++AI A D L + + + ++P Sbjct: 120 EIQIDL---VMDDDEINLIEQGFDLAIRADD--LVDSNLIARLLVPLHSVVCVSPSFYQK 174 Query: 184 FVPEPIAESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 + + SQL I+ + N + + + V + I Sbjct: 175 HRQQLTSPSQLADLNCILYSYSKNADVWQFNANNGDEFKVKVTGNYRVNNSAALRDAVIA 234 Query: 238 GEGIGFLPDYMVREAMTQSLLVTR 261 G G LP ++ A+ + LV Sbjct: 235 GMGAARLPTFVAGAAIQRGDLVAI 258 >UniRef50_Q1ZUA4 Transcriptional regulator, LysR family protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZUA4_PHOAS Length = 289 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 53/272 (19%), Positives = 112/272 (41%), Gaps = 9/272 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + +++ F A SF +AAE G+ S +S I +E + + L R+TR IELTE Sbjct: 1 MKSLDDMALFVEVANVMSFRQAAEITGVPNSTLSRRISALEKAIGLRLLHRTTRKIELTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++ + ++ + +++ I++ VR+ + + A LL KQ+P Sbjct: 61 AGQLYYERCRRIVEEAKLAHQQLSDIAENPSGTVRVSAP-IDFATHFIAPLLPEFSKQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ ++ + D + ++AI A ++ + + ++ +P + LA Sbjct: 120 EIELEF--DLSSRRMDM-TSEYFDVAIRAGES--ESSSLIARKLANFHHYVYGSPAY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTI--NKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 EP +L + + +AH ++ + + V Q +L G+ Sbjct: 174 QYGEPQLPDELTQHQCFSIVKSAHWAMHSEDKSADIKVNSKLFVNSIGMIKQLIVLNMGL 233 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRML 273 G LP M+ + + Q L + Sbjct: 234 GLLPQEMITDELAQGTLQRILPDWQSSPVPIY 265 >UniRef50_Q65QK1 LysR protein n=1 Tax=Mannheimia succiniciproducens MBEL55E RepID=Q65QK1_MANSM Length = 288 Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats. Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 14/283 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN F+ + F GSFS AAE L LT SA+ +I R+E L+ LF RSTR I Sbjct: 1 MNDKFS--GIEEFLMTVEMGSFSAAAERLNLTGSAVGKSISRLEQRLNTQLFHRSTRKIT 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G + ++ + K + + SQ I +RI + +LL ++ Sbjct: 59 LTREGEVWLASCRRMMEELEQAKLLLSSQSQQIIGEIRIDLPTTYGRSHILPKLL-AIQA 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P + ++ + + D I +IA+ + L D I +I + P Sbjct: 118 DYPKLYLNISFQ--DRKVDMIAE-HIDIAVRFGE-LADLTDIIAKQIDCFQNQLCATPAF 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQI 236 ++ + L +P I+ + + K G+ L+ Q I D + + Q + Sbjct: 174 -VSKWGKLNHPDDLTHFPCIVGNQISWRLMNEQGKSTGFPLNVQHQI--NDGDARLQAVL 230 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 GI FLPD++++ A+ LV + + Q Sbjct: 231 ADCGIAFLPDWLIQPAVEAGKLVQLLPEFTPPPEPIYVLWQKK 273 >UniRef50_A6D3V1 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D3V1_9VIBR Length = 293 Score = 190 bits (482), Expect = 6e-47, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 104/261 (39%), Gaps = 4/261 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A GS +K A +G T +++S + +E L V LF R+ + L ++ Sbjct: 1 MNLTKLRVFALTAEHGSLTKVANIMGKTRTSLSMALSSLEDELGVELFERTRNRLVLNDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G ++LN ++ + + QG ++RI + L + +L+ L +FP Sbjct: 61 GSALLPDCRNILNMAESLYSKAEQFRQGDSDKIRIAYDDTLPSSFWRKQLV-ALSDEFPH 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +TV + + N ++ G + D + + IR +P H LA Sbjct: 120 VSLTVIKASSADIPTLVRENHVDLGYGLVFSSGDDPQVKVRALHRIRMMAVCSPKHELAK 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + + + + I++ I++ + ++ ++ I G + Sbjct: 180 LTN-VTSTDISAHRQIVLSHLFEEIHQDFRPI--SSSTMSFSNYQEVLDAVIDNLGWAII 236 Query: 245 PDYMVREAMTQSLLVTRQIHN 265 P+ +V++ + Q LV + N Sbjct: 237 PETLVKQELRQEHLVVVKHPN 257 >UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YE9_COLP3 Length = 309 Score = 190 bits (482), Expect = 7e-47, Method: Composition-based stats. Identities = 60/295 (20%), Positives = 109/295 (36%), Gaps = 14/295 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 ++ AF + GSF+ AAE+L + S IS I R+E L V L R+TR + LTE GR Sbjct: 11 LSDVAAFVCVVQTGSFTAAAEQLNTSKSVISKYITRLEKRLGVKLLARTTRRLTLTEIGR 70 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F+ + L + + + ++I L + H A L+ ++P Q Sbjct: 71 TFYEGSRQGLEAIDNAEEAVSFLQGKPRGTLKINAP-LSFGALHIAPALEEFIHRYPEMQ 129 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I + + + D I + ++ + L G + I A AP++ LA Sbjct: 130 IDLRFD--DKKIDMIKDG-FDLTVRITHQL--EGNLIARRIAPCHHALVAAPNY-LAKRG 183 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV------PDFNTKCQCQILGEG 240 P L + I + + + + V + + + G G Sbjct: 184 TPKRPEDLVAHNVITYQYQQSPWEWEFTAAKSKPKRVRVNGSVQMNNSLAIREAVLAGVG 243 Query: 241 IGFLPDYMVREAMTQSLLVT-RQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 I +P + V E + L+ ++ + S L+ + + T+ Sbjct: 244 ISRMPTFAVGEDIKSGRLIQLLPKYSLLEHSIYLVFPERNHMAPKTRAFIDYMVK 298 >UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=C6DER6_PECCP Length = 298 Score = 190 bits (482), Expect = 8e-47, Method: Composition-based stats. Identities = 54/280 (19%), Positives = 103/280 (36%), Gaps = 16/280 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + F A SF A LG++ SA+ ++ R+E L V LF RSTRSI LT Sbjct: 1 MDSLNGFMVFVQVAETRSFVAAGRLLGVSASAVGKSVARLEEKLGVRLFHRSTRSITLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F ++ +L + A + + R+R+ + +L +++P Sbjct: 61 EGSLFLARSRRILAEIEAAELELSQTKAVPRGRLRVSLP---LVSSLVLPVLGEFMREYP 117 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + +I + + D + + +G R+ APD+ LA Sbjct: 118 EIELDL---DFTDRMVDVIEEGFDAVVRTGDPV--DSRLTARRLGTFRFLVVAAPDY-LA 171 Query: 184 FVPEPIAESQLRLYPNIMVE-------DTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 P + L + + + L S++ + T+ + Sbjct: 172 RYGCPQTPADLMQHACLHYRFPNSGKLEPWALRLPPGEPELPLPTSMICNNIETRVCFAL 231 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 G GI +LPD+ +RE + L + + Sbjct: 232 QGLGIAYLPDFSIREQLAGGQLQPILTDYVERSGVFHVLW 271 >UniRef50_D2RJU1 Transcriptional regulator, LysR family n=1 Tax=Acidaminococcus fermentans DSM 20731 RepID=D2RJU1_ACIFE Length = 297 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 61/294 (20%), Positives = 112/294 (38%), Gaps = 10/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F A SF+K AE+ ++ +A+S IK +E L V LF R R + LT + Sbjct: 1 MNIQQLRYFLVLADTLSFTKTAEKYYISQTAVSNQIKALEEKLGVQLFQRDNRKVLLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ F ++A ++ + ++G + + Q + R+LQ + ++P Sbjct: 61 GKVFVKEAKSIITRIEEAVQHTKDAAEGFAGEIHVGY-QWGFERTVFPRVLQDFQYEYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + ++D +I + +I P G+ + A+ P HP A Sbjct: 120 IEILIERDEVAALYDGVIEGKYDIIFNLPLPGKKKSGLKEMVLARYPLYVAVPPQHPFAE 179 Query: 185 VPEPIAESQLRLYPNIMVEDTA-HTINKKVGWLLHGQESILVPDFNTKCQCQI------- 236 + QL I A + L + LVP+ N + Q Sbjct: 180 FHS-LKREQLADEIFISYRQNALSEYDPTQAILADFADVGLVPNINFQHQAIESILLFVA 238 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 LG+GI +P+Y + A L+ + + + + Q T + Sbjct: 239 LGKGITIVPEYFLPCAPAGINLLFIPLEDSALPAEVAAIWQEKNTNPALDKFVE 292 >UniRef50_A6VX33 Transcriptional regulator, LysR family n=2 Tax=Marinomonas RepID=A6VX33_MARMS Length = 293 Score = 189 bits (481), Expect = 9e-47, Method: Composition-based stats. Identities = 59/298 (19%), Positives = 113/298 (37%), Gaps = 13/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + LL F A SFS+A ++L +T A+S I +E+ L V LF R R ++LTE Sbjct: 1 MIDIAELLTFIKVAETSSFSEAGDQLFVTQPAVSKRIASLESSLGVKLFDRIGRQVQLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G KA + D IKR + Q + +RI + + L+ ++ FP Sbjct: 61 AGIRLLPKARKMAEDLQDIKRSMTLQMQDVSGELRISTGHHIGL-HRLPKSLKRFQENFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + ++ +A + I + + I+ I + ++ DHPLA Sbjct: 120 NAQLEIEFVQSEEAYQDVLKGRAELGI-ITLSNKENPLIESLPIWSDPLTCVVSKDHPLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGE 239 ++ +L + ++ T L Q + + +G Sbjct: 179 RYNN-VSLIELAQHACVLPNKNTFTRQIAEQAFGKQGLKPQVRMNTNNLEILAMLVHIGW 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPNG 296 G LP +V E LV + + + ++ ++ + + + +G Sbjct: 238 GWSLLPSTLVDE-----KLVVLNLPDLNVERKLGVIHHKQRTLSRAAVAFIELLKSDG 290 >UniRef50_Q13L83 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q13L83_BURXL Length = 302 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 57/291 (19%), Positives = 105/291 (36%), Gaps = 12/291 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 L AF A SFS AA LG++ SA+S+ ++ +E LDV LF R+TRS+ LTE+G Sbjct: 6 LSELTAFVAIAHQRSFSAAARTLGVSPSALSHAMRGLEARLDVRLFNRTTRSVALTEAGE 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 R+ + D + +RI ++ P +L +P Sbjct: 66 QLLRRVGPAIADLEDAVNEAASARNRPSGSIRISASESAARP-LVQHVLPGFLATYPDIH 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + + + D + + + I + I +R+ +PD+ +A Sbjct: 125 VEFVVDT--RLVDIVADG-FDAGIRVLQDVPRDM-IATRFGPDMRFIAVASPDY-VARNG 179 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKV------GWLLHGQESILVPDFNTKCQCQILGEG 240 +P A L + I + + + G + + + + N + + G G Sbjct: 180 KPKAPHDLARHRCIRFRFESGALYRWDLEYRGKGASVDVDGPMTLGNLNLMVEAALAGIG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQ 291 I ++ D + E + LV + L + + Q Sbjct: 240 IAWVSDQLAAEYLASGRLVQLLAEWSPSFPGLCLYYPANRHPPTALRLFAQ 290 >UniRef50_B7RV59 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV59_9GAMM Length = 292 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 56/285 (19%), Positives = 112/285 (39%), Gaps = 11/285 (3%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + AF AR GSF++AA+EL + A++ +IK++E+ + + LF R+TR + T +G F Sbjct: 1 MRAFVVVARHGSFNRAADELSRSQPAVTLSIKQLESYVGLKLFERTTRKVTPTTAGEKFI 60 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 A LL +F + + V + + + T + ++ ++FP I V Sbjct: 61 PVAERLLREFDMAIYDVTATADCRSGHVSMSVLPSVAT-RILPDVISEFTEKFPDISIHV 119 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + GV ++ N+ + IG+ +++ + R+ DHPLA P+ Sbjct: 120 SDYNAQGVQRSVERNEVDFGIGS--LWHPNSKLEFRPLMEDRFELVCHKDHPLAAEGAPV 177 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMV 249 QL+ + T ++ G NT G+ LP + Sbjct: 178 TWEQLKGLSFLSTGLTQALKMQRYI----GNPKFEFTTTNTLFAMLKANVGVTVLPT-LA 232 Query: 250 REAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQVTQWIKKQFA 293 + L + + +P + + + + + + + Sbjct: 233 MP--QEDDLRSLPMVDPVETREICVILRQDWTLSPAANAMMEVLS 275 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 54/294 (18%), Positives = 103/294 (35%), Gaps = 12/294 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A SFS+AA L ++ AIS I+ +E L R+T+ + LT + Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G ++ LL+ +R I + I+ ++ + + L LL +++P Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGAS-LTIGGHVLPPLLSSFYRKYPD 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 IT+ V + + + ++ + + G + + +A +HPLA Sbjct: 120 VNITMEIMNTEKVLERVSDLTLDLGFV--EGEVTTGELHVEALARDELVVVVAANHPLAG 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 I+ +L P +M E + T L + + + Sbjct: 178 RGR-ISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKK 290 G G L + VR + + I N + ++ TQ + + Sbjct: 237 GLGAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQ 290 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 110/296 (37%), Gaps = 12/296 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ F A SF +AAE L L +S IK +E L LF R+TRS+ LT S Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A +L ++R+ G+ +RI + T + A +L+ + QFP Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSR-LATILRSYRNQFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q ++ ++ +Q ++ + P +D+ + A+ H LA Sbjct: 120 VQFSLHEMTSVEQLQSLRLDQLDVGLLRPPVAF--PELDFHFLEESPMVLAVPAGHRLAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL---HGQESI---LVPDFNTKCQCQILG 238 I P +M+ + L G I D ++K G Sbjct: 178 Q-RLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAG 236 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G+ P + + LV R++ + L+ + + + + F+ Sbjct: 237 FGVA--PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKRTNNSPMVGNFIECFSK 290 >UniRef50_Q1QY93 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY93_CHRSD Length = 298 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 123/304 (40%), Gaps = 21/304 (6%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + L F R GSF+ AA L ++ S S + +E L V L RSTRS+ LTE Sbjct: 1 MTTLDALRVFVEVVRAGSFTAAARRLSISKSLASKRVAALEDELSVNLLNRSTRSLRLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++ ++ + + + ++ +++ ++++ Q+ + + A +++P Sbjct: 61 AGQIYYEHGLRVIEELQSAEAQVQSVTSQPRGQLKVSA-QVSFGFMYLAAPTTAFMRRYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + E + ++ I ++ ++AI L + + + + APD+ LA Sbjct: 120 DVSVEILLE--DQRFEPI-DDSVDLAIRM--GPLPPSSLVSRPLCKVVYGLYAAPDY-LA 173 Query: 184 FVPEPIAESQLRLYPNIM---VEDTAHTINKKVGWLL--HGQESILVPDFNTKCQCQILG 238 P+ + Y + + AH G L +++ + + G Sbjct: 174 RAGRPLHPRDIADYDTVFYGNYDLGAHWRFSLNGQPLDIEPNSRLVINNLLGVVEAAKSG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ---------VTQWIK 289 G+ +LP + R A+ + L+ + ML+ + +T W + Sbjct: 234 FGLAYLPTFAARAAVEEGQLIPLLQPYWNEHGSMLVLFRSRKYLPDKTRAYLDFITDWFR 293 Query: 290 KQFA 293 + A Sbjct: 294 EHLA 297 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 118/305 (38%), Gaps = 16/305 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L F A ++ A +L LT SA S I +E LF R R I LTE+ Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A +L +A ++ + ++ + I +Q + ++ + QFP Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTI-ANYWLPPFIKRFRSQFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 IT+T + +GV I A++ + + +D + + PDH A Sbjct: 120 VAITLTIDNTDGVARRINEGLADLGLV--EGEIDDPSVSVAPFAEDELVLVVPPDHAWAH 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQE---SILVPDFNTKCQCQIL 237 P ++L + P ++ E + T + L ++ S+ +P Sbjct: 178 DPRR-QPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS--ATGQVTQWIKKQFAPN 295 G G+ + +V A+ LV ++ P++ A +H + + + AP Sbjct: 237 GAGVTVVSGLVVSNALKAGSLVQVKLDLPKRR---FFALRHKEFSMTRAQRAFLDLIAPK 293 Query: 296 GILTG 300 LT Sbjct: 294 PSLTQ 298 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 103/297 (34%), Gaps = 10/297 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ +L AF SF +AAE L ++ A++ I+++E + L R+TR + Sbjct: 1 MSINCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 T +G+ +L +F I + + +++ + Sbjct: 61 PTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTAAF-YFLPTVIRTFGR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P ++ + N A+ + I + + + + A+ DH Sbjct: 120 DYPHIRLRIRDLTANEGLQAVARGEVEFGINLMGN--SDPDLSFEPLIDDPFVLAMRKDH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKCQCQI 236 PLA E I +QL +P ++V+ ++ L + V NT Sbjct: 178 PLAAFDE-IHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVE 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQF 292 G GI LP + LVTR I NP + + + SAT Sbjct: 237 AGLGISVLPR-LATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDML 292 >UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n=4 Tax=Burkholderia RepID=C5AIJ9_BURGB Length = 301 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 56/284 (19%), Positives = 103/284 (36%), Gaps = 12/284 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 L AF A SF AA L ++ SA+S+ ++ +E L V LF R+TRS+ LTE+G Sbjct: 6 LSELTAFVAIAEQRSFRAAARALAVSPSALSHAMRSLEARLGVRLFNRTTRSVALTEAGE 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + L+D + + T VRI + +L ++P Sbjct: 66 RLLHRVGPALSDLESAVDEVSTAQNRPSGSVRINAPE-TSARLLIRHVLPDFLLRYPDIH 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + T+ + D + + I A D + I +R+ +P + LA P Sbjct: 125 VEFVTDT--RLIDIVAEG-FDAGIRALDDVPRDM-IAVRFGPDMRFIAVASPAY-LARHP 179 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWL------LHGQESILVPDFNTKCQCQILGEG 240 P + L + I + + + L L + + + N + + G G Sbjct: 180 APERPADLMQHRCIRHRFESGALLRWDFQLDGKTCSLDVNGPLTLGNPNAMIEAALAGIG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV 284 + ++P+ + E + L+ + L + Sbjct: 240 VAWVPESQIEEHLASGRLIALLDAWSVPLPGLALYYPANRHPPA 283 >UniRef50_B1I630 Transcriptional regulator, LysR family n=1 Tax=Candidatus Desulforudis audaxviator MP104C RepID=B1I630_DESAP Length = 297 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 61/289 (21%), Positives = 108/289 (37%), Gaps = 10/289 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + L F AR S+S+AAEEL L+ A+S I +E L + LF R R ++ Sbjct: 1 MITDIPLSQLRVFHAVARHLSYSRAAEELALSQPAVSRQISNLEGLLGLRLFDRRGRRVQ 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT++GR + A +++ +R +D + +VR+ + L+ Sbjct: 61 LTDAGRSLYEYADQIVHLAGEARRAMDGLRNLERGQVRLGLAASAAG-HALRSTLKQFGA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P ++ + + + ++A+ PD L G+ + + A DH Sbjct: 120 FYPEIEVRLKVAPSRRIQQLLAEGALDLALAGPDVL---PGLHIEFVLSDTLILVSASDH 176 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ----ESILVPDFNTKCQCQI 236 P P P + ++ + + LH E+I VPD++ Sbjct: 177 PWTTQPPP--DYAALNRQILLWPPRGSGVREAAASFLHAHGLQPETIEVPDWSAIRNLAA 234 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVT 285 G G+ F+P + LV SR LL+ + Sbjct: 235 AGTGLAFVPAAPAAPELETGRLVQYGPGWTFSFSRCLLSAKDRPLFPAA 283 >UniRef50_A8G163 Carbonate dehydratase n=14 Tax=Gammaproteobacteria RepID=A8G163_SHESH Length = 289 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 58/293 (19%), Positives = 120/293 (40%), Gaps = 9/293 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F E + F A SF+KAA+ LG++T+ +S + +ET + LF R+TR + +TE Sbjct: 1 MFNWEGVSEFVAVAEAESFTKAAKRLGISTAQVSRQVSALETRMATKLFHRTTRKVSVTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR +++ +L+ +R I + ++I + Y + A L+ ++P Sbjct: 61 VGRIYYQHCRQVLDGLEEAERAITNLQSTPRGLLKITAP-VTYGERTLAPLVNDFIAKYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V+ + N D +I+ ++AI L+ + +G+ +P + ++ Sbjct: 120 ELEVKVS--LTNQKVD-LIDEGYDLAIRL--GQLEDSSMMAKRLGSRTQYVCASPGY-VS 173 Query: 184 FVPEPIAESQLRLYPNIMVE-DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 P + S+L + ++ D + + ++ + I G GI Sbjct: 174 TFGIPHSLSELEQHNCLLGTLDYWRFQENGKTRNVRVKGNLSCNSGHALVDAAIKGIGII 233 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAP 294 LPDY V + L+ N + D + L + + + + Sbjct: 234 QLPDYYVLPYLEDGQLIPLLEQNRQPDEGIWALYPHNRHLSPKVRMLLDYLSE 286 >UniRef50_C9QE28 Transcriptional regulator n=3 Tax=Vibrionaceae RepID=C9QE28_VIBOR Length = 315 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 9/294 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E + F A SF+ AA +L + + IS + +E L V LF R+TR + LTE Sbjct: 27 MANWEGVSEFVGVAETQSFTAAANKLDTSVAQISRRVSALEERLAVKLFNRTTRKVSLTE 86 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++++ L+ + + + + +++ + Y +H A LL + +P Sbjct: 87 AGQLYYQQCKHLVEGLELAELAVTQMQSTPKGLLKVTAP-VTYGEQHLAPLLHQFLELYP 145 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + N D +I ++AI L + + + + +PD+ L Sbjct: 146 QVNLDL--MLTNQKLD-LIELGVDVAIRL--GRLQDSSLIAKRLSSRQLYVCASPDY-LD 199 Query: 184 FVPEPIAESQLRLYPNIMVE-DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 EP S+L + ++ + + K + I G G+ Sbjct: 200 RFGEPHTLSELSNHQCLVGSVEYWRFRDTKGEKSMRVSGRIHCNSGYALLDAAKRGLGLA 259 Query: 243 FLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 LPD+ V+EA+ LV ++ L Q+ + + A Sbjct: 260 QLPDHYVQEALDTGELVEVLTEYRDEREGIWALYPQNRNLSPKVRLLIDFLAEK 313 >UniRef50_A6U726 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=A6U726_SINMW Length = 310 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 57/265 (21%), Positives = 114/265 (43%), Gaps = 14/265 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + +F + GS + AA LG+T +A S I R+E L + L R+TR LTE Sbjct: 5 MDSLRGIESFVRSVEEGSIAAAARRLGITPAAASQNIARLERALGIRLLVRTTRQSGLTE 64 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR ++ + +++++ + +++ R++I + + + A L+ ++P Sbjct: 65 AGRLYYDRVREVISELEQAAAAVSVLNEEPRGRLKIA-SSVAFGRHVIAPLVPSFAARYP 123 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + V + D I +I++ L G+ ++G++ AP + +A Sbjct: 124 DVSIELV--VTDRSIDHIGEG-IDISVRFAQQL--EPGLITRKLGSVPLVICAAPSY-IA 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQI 236 P LR + ++ H + ++ G + +I+ D +T Q I Sbjct: 178 RRGRPETPEDLRHHDCLIYRFAGHGRLFRWAFVRDGLRFEPELRPTIVSNDIDTLAQMAI 237 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTR 261 G GI L ++ + Q LLV Sbjct: 238 AGAGITRLGTFIANQFFEQGLLVPL 262 >UniRef50_A9ACH3 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=A9ACH3_BURM1 Length = 310 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 14/285 (4%) Query: 1 MNSIFT--EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRS 58 M S T + ++ F A G F+ AAE L LT SA+S ++ R+E L VVLF R+TR Sbjct: 7 MASFPTEHLKGIVPFVCVADAGGFTAAAERLNLTNSAVSKSVARLERRLGVVLFERTTRK 66 Query: 59 IELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVL 118 + LT++GR F+ T +L + + + + VRI + + +L Sbjct: 67 LVLTDAGRAFYETCTRILAELAEAEAVLAAQQREPVGTVRIALPAS-FGRLCVVPVLVRF 125 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 +Q+P + + + + + ++A+ + +G R F AP Sbjct: 126 SEQYPDVRPHLL---FTDRFVDLAEEGIDLAVRIGGPPGLPPSLGRRFLGRERLIFCAAP 182 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTK 231 + L P L+ + I+ + GQ I+ D + Sbjct: 183 AY-LEKNGIPQTVDDLQEHACIVYGRPDGAQSLWSYAAADGQVEQRVVRPRIVAGDAEAQ 241 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT 276 G G+ L ++VR+ + LV + L Sbjct: 242 LAFVRAGLGVAQLATWLVRDDLKAGRLVAILDEAATDGLPLSLIW 286 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 50/292 (17%), Positives = 103/292 (35%), Gaps = 10/292 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L+ F T G+ S AAEEL LT A+S ++ +E + L R R + LT + Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G +R A + + +R + ++Q + R+ + + RL+ ++++P Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGAST-TPGQYILPRLIGAFRREYPR 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ +T V + + ++ G + Y+ + + P H LA Sbjct: 120 VEVILTIADTQEVVQRLQEGEIDLG-VVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAG 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 I+ +L+ P + E + T L Q + + Sbjct: 179 ATA-ISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEA 237 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIK 289 G GI + + V +++ L + + L + + Sbjct: 238 GLGISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFV 289 >UniRef50_A6CV53 Transcriptional regulator, LysR family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CV53_9VIBR Length = 294 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 66/293 (22%), Positives = 115/293 (39%), Gaps = 7/293 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + E L F TAA GSFS AA L T +AIS +I +E L + LF RST+ LT Sbjct: 1 MLSTEQLFIFKTAAEQGSFSAAARLLNKTPAAISISISNLEIQLGIDLFDRSTKYPRLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +++ T L+ I+ + +Q +E +V I I++L+ + LQ L FP Sbjct: 61 AGERLYQQCTLLVRHIERIESAATSYAQQVEDKVTIGIDRLIPSC-MIESGLQKLASDFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + + + I ++ ++ + T + +++ +I + APD LA Sbjct: 120 NTAIHIVRDTNANLQSRIELHELDLVLQCA-TAAEPKSLEFFDIALMEMCCVCAPDSDLA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + L I E + + L E ++ D G G F Sbjct: 179 DTA-IVDNEALLTRRQICCESMIENPSLSLQGRL-SPEIWVMTDQEDVLNMVEQGLGWAF 236 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWIKKQFA 293 +P + ++ L+ + L G+V + + Q Sbjct: 237 VPKVLAKQRQEVGSLLIINPEFSCTEILCRIDLWCAPSKNQGRVVKQLVGQIK 289 >UniRef50_B2JVU4 Transcriptional regulator, LysR family n=43 Tax=Proteobacteria RepID=B2JVU4_BURP8 Length = 322 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 104/270 (38%), Gaps = 9/270 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M F +L AF GSF KAAE + ++ A+S I ++E L V LF R+TRS+ Sbjct: 1 MGINFDLNDLQAFRAVVELGSFRKAAEAVNISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT GR F A LL+D I +S V I + + + Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSV-AYYFLPGAVASYHR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++ + N V A+I+ +A+ + + +++ + R+ A DH Sbjct: 120 RFPRIRVKILDSSANDVLAAVISGEADFGVSFMGS--QEPDVEFKMLLQERFVAACRRDH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKCQCQI 236 PLA + ++L + + V+ T+ L + T Sbjct: 178 PLARKKR-VTWNELYEHEYVSVDKTSGNRLLLDQALGAVSPRMPSVCETRHVTTMLGLVE 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNP 266 G G+ +P M +L + + P Sbjct: 237 AGLGVAAVPS-MAMPGRNHHILTSVPLVEP 265 >UniRef50_UPI000197C884 LysR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C884 Length = 284 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 15/294 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN ++ E L F AA SFS AA +L + S +S TI E L LF R R Sbjct: 1 MN--YSIETLRTFVEAASLKSFSAAARKLNKSQSTVSTTISGFEDDLGFALFDRQGREST 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR D+L+ ++ + IE R+ C Y P H ++ L + Sbjct: 59 LTFAGRKVLSLVEDILSADERLQALRVELLPDIEPRLS-CAFSDTYQPPHAEHIVTTLDR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIG-AIRWAFAIAPD 179 QFP + N V + I N QA++ + T I ++ + + Sbjct: 118 QFPHLEFEFLIAENNAVIEMIQNQQAHVGMMESRTEYPA-DISFSRLPIQGELGLYVLDS 176 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + I L + + ++ +++ +++ P++ + G Sbjct: 177 HPLAKEKK-ITYQHLTMTRQL-------RLSSSSQIIINSEKNWFAPNYLLLLEMAEQGA 228 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQF 292 G LP ++V++ LV+ PR+ L+ ++++ G+ W+ + Sbjct: 229 GWAILPTWLVKQFGHN-RLVSINYDLWPRKIDVDLVWSKNNPPGKAGYWLINKL 281 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 50/296 (16%), Positives = 98/296 (33%), Gaps = 10/296 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S ++L F GSF++AA+ L LT +++ + +E L V LFTR + + LT Sbjct: 9 SSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLT 68 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G + A +++ + + V + + LL ++ Sbjct: 69 PVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTIGL-FTLPELLAAYVREH 127 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I V T +++ + ++ + + I+ + P Sbjct: 128 PRVKINVKTGNNRETVTMLLHGEVDVGLVTTPQV--HERIEVVPLFEDPLVVVAGPSFA- 184 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILG 238 A +P ++ + L P I A L + Q + + LG Sbjct: 185 ADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALG 244 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHN-PR-QDSRMLLATQHSATGQVTQWIKKQF 292 GI P V+ + LV + PR + L+ + + + Sbjct: 245 FGIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLL 300 >UniRef50_Q142A3 Transcriptional regulator, LysR family n=53 Tax=Burkholderia RepID=Q142A3_BURXL Length = 336 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 111/301 (36%), Gaps = 14/301 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 +L+ F+ G FS A LG++ S +S + +E L V L RSTR + LT Sbjct: 12 DSHNLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEASLGVRLLQRSTRKLALT 71 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E+G+ F++ +L++ A + + VR+ + + + +++L ++ Sbjct: 72 EAGQLFYQHCQAMLSEAQAAVNVVQQLRSSPRGTVRVSVPVTI-SQTILSQILPEFMHRY 130 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ V V N V D + + ++A+ + I + + AP L Sbjct: 131 P--EVRVVMRVTNRVID-LFEDSVDVALRVRSDPPENANIVVRPLWRTQQMLVGAPS-LL 186 Query: 183 AFVPEPIAESQLRLYPNIMVE--DTAHTIN----KKVGWLLHGQESILVPDFNTKCQCQI 236 P+ + L + + V D H N + ++ D T + + Sbjct: 187 QQNAPPLLPADLNRFETLDVPTGDGRHVYNLIAPDGTRHAHEHEPRLVTADLMTIREAVL 246 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATG--QVTQWIKKQFAP 294 G GI LP+ M A+ L + + + L A S G + Sbjct: 247 AGVGIAALPEMMYGAALRAGQL-SPVMPGWTFPTPQLYAVFVSRQGMVPAVRAFVDYLVE 305 Query: 295 N 295 Sbjct: 306 M 306 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 56/292 (19%), Positives = 107/292 (36%), Gaps = 9/292 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + L F + AR SFS+AAE+L ++ A+S IK +E L V LF R+ R +ELTE+G Sbjct: 4 SLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTEAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R A LLN + + +VR+ + + L + +P Sbjct: 64 RQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAAST-TAGIYVVPKALGAFHRAYPGV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++++ V ++ A++AI + D ++ + +P H LA Sbjct: 123 ELSLDVLNRFAVHQRLLAGDADVAIMG--LIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEGI 241 + I ++ P ++ E + T L + ++ + Q G+ Sbjct: 181 HQ-IPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGV 239 Query: 242 GFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P + + L+ + P + L+ + Sbjct: 240 AVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFL 291 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 56/279 (20%), Positives = 98/279 (35%), Gaps = 8/279 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F T A +F++AAE L S ++ IK +E L V LF R + + LT + Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ F A +L + + +Q + + I N+++ + + Q + Q P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQ-LSGTLTISANEVICS-YRLPPVFQRFRSQHPG 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + + +I D + G+ + + APDHPLA Sbjct: 119 VRLIFRSVPNQELKQTLFEGTTDIVYML-DEPICSSGLVVEPLVEENFRLLAAPDHPLAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINK-KVGWLLHGQESIL---VPDFNTKCQCQILGEG 240 + + E + G +SI +C I G G Sbjct: 178 RT-VLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKCAISGIG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 I FLP+ +V + + LV P + Sbjct: 237 IAFLPEIVVEAEVERGELVVLPWQIPDLQVYTQMLRHKD 275 >UniRef50_C8SVH4 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SVH4_9RHIZ Length = 307 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +L F A SFS A LGL S +S I R+E L LF R+TR++ LT Sbjct: 1 MIDLNDLRVFERVAATSSFSAAGRALGLPKSTVSRNIARLEQQLGARLFQRTTRAVILTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + DL+ ++ +S +R+ + + +R L +FP Sbjct: 61 AGEALQARCADLMARIDETVAYVEGLSGEPRGLLRVSAG-IGFGINVLSRHLPEFLARFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +++ ++ + D + + ++AI L + T +G++R A APD+ L+ Sbjct: 120 HVDVSL--DLTSRDLDLVAE-RVDVAIRM--GPLPDSALVATRLGSVRRCLAAAPDY-LS 173 Query: 184 FVPEPIAESQLRLYPNIMV------EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 +P+ + L + I + T H + + V D T Q Sbjct: 174 RHGKPLTPADLSKHECIEMPRGDGRMRTWHFYRGGEMAAVDVHNRVSVNDALTIHQLVRN 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTR 261 G G+G L Y+ + + LV Sbjct: 234 GAGLGVLSTYLCVDDFAEGRLVPL 257 >UniRef50_Q2SCX5 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCX5_HAHCH Length = 296 Score = 187 bits (475), Expect = 4e-46, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 109/290 (37%), Gaps = 17/290 (5%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + AF + G FS A +L L+ +S + ++E L LF R+TR + LT +G ++ Sbjct: 1 MRAFCAVVQEGGFSAAGRKLNLSKVLVSKYVGQLEDRLGARLFHRTTRKVRLTPTGEAYY 60 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + + LL + I+ R+ E +RI + H L+ ++ +++P + V Sbjct: 61 LRVSPLLRELDDIEARVRDEHGEPEGLLRIAAPAS-FAEIHLMPLVALMLEKYPGLTLDV 119 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + ++ Q ++A+ L + ++ I + + L P Sbjct: 120 R---LADRYVDLLEEQVDLAVRI--GYLQDSSLVAQKLADIPIVWCAGAAY-LERRKAPQ 173 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQILGEGIG 242 + L + ++ D+ ++ G ++ + V + + G G+ Sbjct: 174 SPDDLAEH--CVIFDSNYSGGDYWPVPREGGVTRQPMRKRVSVNSARAAKELALAGMGLA 231 Query: 243 FLPDYMVREAMTQSLLV-TRQIHNPRQDSRMLLATQHSATGQVTQWIKKQ 291 LP +++ + + L Q + P + + + ++ Sbjct: 232 RLPAFVIGDELASGELRPVLQEYWPEASAVYAVYPHRRHLSARVRLFVEE 281 >UniRef50_B4EWF9 LysR-family transcriptional regulator n=16 Tax=Proteobacteria RepID=B4EWF9_PROMH Length = 300 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 55/270 (20%), Positives = 102/270 (37%), Gaps = 4/270 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E++ F GSFS AA L SA+S I ME L LF RS+R TE Sbjct: 3 FSSEHIAIFLAVMDKGSFSAAARSLKRVPSAVSMAIANMEAELGYALFERSSREPRPTEK 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 + A + ++ +S +E+ + I + + P + L L +++P Sbjct: 63 AKALEPHARMIAEQLKLLQVHAQELSMDLESILNIGVAADI-NPDYLLPALSELTQRYPL 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V T + + + + + + + ++G + +G+ I+ H Sbjct: 122 LKVNVVTAAQDDIIEMLHARKIQLCLVYGGLYVNGDE-QFQYLGSESLVATISASHIALA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P + L IM+ +HT + L +F G G G L Sbjct: 181 HPAGVFIEDLVNVRQIMIA--SHTQEIRDVRSLVATNYWQTDNFQMALGMVEAGMGWGNL 238 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLL 274 P ++ + + L Q N + + R+ + Sbjct: 239 PYSLIYTQLQKGKLKQLQFKNTKNELRLPV 268 >UniRef50_C6B409 Transcriptional regulator, LysR family n=8 Tax=Rhizobium RepID=C6B409_RHILS Length = 300 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 12/263 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++ F A++GSFS+AA LG+ S +S + +E L V L R+TR + LT Sbjct: 1 MADLNDIAVFVKVAQYGSFSRAAHSLGMPVSTVSRKVTSLEEQLGVTLIQRTTRKLSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR ++ + ++ L + + + E ++I + +++ + + +K +P Sbjct: 61 QGRAYYDRCSEPLAHLLDAEHALTETQRKPEGLLKISVP-VIFGQEVFYEFVSAFQKTYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + D I N ++AI D L I +G APD+ L Sbjct: 120 KIQVDLFVTNL--FLDLIAEN-IDLAIRFGD--LKDSTIVAQRLGKSVRYLVAAPDY-LK 173 Query: 184 FVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P+ +L+ + +++ E H ++ + LH I DF+ G Sbjct: 174 GRVLPLKPEELKDHQCVLLNGRNGEAEWHLVSGRKSVRLHVSGPISSRDFDAVSAFTYRG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTR 261 GIG LP E + + L+ Sbjct: 234 HGIGLLPSTYCEEQIRKGELIRL 256 >UniRef50_Q5FP23 Transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FP23_GLUOX Length = 303 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 114/280 (40%), Gaps = 17/280 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M FT + F GSFS AA LGL+ + ++ I +E+ L + LF RSTR + Sbjct: 1 MLDRFT--GMQVFAKVVAQGSFSGAARSLGLSQTMVTKHIAALESRLGISLFHRSTRKLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR FF ++ +L D +++ + +Q +R+ + + +H +L + Sbjct: 59 LTEPGRLFFIRSQKILTDLEEMEQEVSAENQEPRGLLRLNAP-VSFAIRHVGPILPEFSR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINN-QANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 + P + + + + D I + IG + + + + + AP Sbjct: 118 RHPLVTVEL--GLDDRRIDPITEGWDLTLRIG----RMPSSALRSRRLAQVDFVVCAAPS 171 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV------PDFNTKCQ 233 + L P + + L + + + + + +G+ ++ V + + + Sbjct: 172 Y-LEEYGTPRSVADLPNHRCLGYTLGDEISSARWSFGPNGERTVPVSGPMHANNGDILRE 230 Query: 234 CQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML 273 + G+GI + P ++V + + LV + P L Sbjct: 231 AAVAGQGIIYQPTFIVSDELKSGRLVPLPLDVPVMTGPEL 270 >UniRef50_A3N6S5 Transcriptional regulator, LysR family n=37 Tax=Proteobacteria RepID=A3N6S5_BURP6 Length = 349 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 11/264 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + F FS A L +T SAIS ++R+ET L V L R+TR ++ Sbjct: 30 MREVNRFSEMAVFVQVIESCGFSAAGRRLDMTPSAISKFVQRLETRLGVRLLNRTTRKLQ 89 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F+ + +L D +R T + RVRI + + + H LL ++ Sbjct: 90 LTPEGAAFYERCVRILEDIADAEREA-THGATPQGRVRIN-SHVPFGKHHLMPLLPEFQR 147 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P + + + + + D + + +++IAI + LD + ++G R AP + Sbjct: 148 RYPDITLDIV--LSDSLVDPL-DERSDIAIRS--GALDDSRLVMRKLGGSRMVVVGAPAY 202 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTIN---KKVGWLLHGQESILVPDFNTKCQCQIL 237 L P L + I + A ++ LL ++L+ D + + + Sbjct: 203 -LERNGVPATPDDLDRHNCIGLSGNAKAWPFVAEEGQRLLPSAGNLLLGDNESIREAAVS 261 Query: 238 GEGIGFLPDYMVREAMTQSLLVTR 261 G G+ L + V + LV Sbjct: 262 GLGLARLARFHVDADLDAGRLVPV 285 >UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=C8N722_9GAMM Length = 299 Score = 186 bits (474), Expect = 5e-46, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 12/295 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 ++ AF + + GSF+ AA++LGLT S I I R+E L+V L R+TR++ T+ G Sbjct: 5 NLNDITAFVASVKSGSFTAAAKQLGLTRSTIGKRIARLEARLNVRLLQRNTRNLAPTDEG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R F+ + T +L + ++ + S + R++I L+ LL ++P Sbjct: 65 RLFYERCTAVLEELDNAEQCLAQRSIKPQGRLKISAP-LVLGKTILPPLLADFLHRYPQT 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + ++ + +I++ ++A+ + + + + AP + L Sbjct: 124 SVELS---LTDDYADLISDGYDLALRNGN-PPQCDSLIARTVAQQKMLTCAAPGY-LVQH 178 Query: 186 PEPIAESQLRLYPNIMVEDTA-----HTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P + L + + H K G + + + G Sbjct: 179 GTPQSPDDLAHHQCLHFLHGGRVSRWHFQQKGKETTFQGSGRFSTDNGEALLELALSAFG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 I LP Y+V+ A+ L + P+ M + + + Sbjct: 239 IVQLPHYLVQAALDAGSLKSVLSDFQPKPVPVMAVYPSRKQLSPKVRALVDMMGE 293 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 119/296 (40%), Gaps = 12/296 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + +L F A +F++AAE L + +S I+++E +DV L R+ R +E Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR F +A +L + +G R+ + + + +L+ ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHT-SYTLLPPILRAYRE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP+ +I + +A+ A+I+ P + D + + I + A+ H Sbjct: 120 RFPSVEILLRWFPVVKQAEALRRGDADISFMRP--VPDLEEVTWETILEEPFVLAVPARH 177 Query: 181 PLAFVPEPIAESQLRLYPNIM----VEDTAHTINKKVGWLLHGQESIL--VPDFNTKCQC 234 PLA E I+ + P +M + H +N ++ ++ V T Sbjct: 178 PLANA-ESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGL 236 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 G GIGF+P + + +V + I + ++L + + Sbjct: 237 VSSGAGIGFVPASV--RKVKFDHVVYKPIEGRQPTIEIMLGYSQRTPTPLMTAFIE 290 >UniRef50_Q48GP5 Transcriptional regulator, LysR family n=38 Tax=Proteobacteria RepID=Q48GP5_PSE14 Length = 401 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 112/280 (40%), Gaps = 4/280 (1%) Query: 16 AARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKATDL 75 A GSFS AA LG + S IS I R+E + LF RS+R LTE+GR + DL Sbjct: 121 IAALGSFSAAARRLGKSQSTISEAIARLEIDFGLELFDRSSRQPVLTEAGRVMLGRVDDL 180 Query: 76 LNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTEVYN 135 L ++R ++ G+E R+ + ++ RL+ L ++FP ++ + Sbjct: 181 LCASDRLRRAAARLAAGVEPRLTLVLSDANQFADF-ERLMTELDQRFPELEMECVFAEHG 239 Query: 136 GVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAESQLR 195 + + +A++ + + T + + ++ HPLA + E + QL Sbjct: 240 DAISLVQSGRASLGLLSAQASYPPEIGHATIDESADFGLFVSHKHPLAAL-ERVDYQQLA 298 Query: 196 LYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVREAMTQ 255 Y + + G P++ G G LP ++V + Sbjct: 299 GYRALRLNTLVEHSIPTDDLPTSGHRHWSAPNYLLLMDMAAFGFGWSALPRWLVSRY-SG 357 Query: 256 SLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 LL ++ PR+ + ++ + + G W+ + P Sbjct: 358 GLLKELKVSGWPRRSAVDVIWSFQRSLGPAGAWLLESLVP 397 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 186 bits (474), Expect = 6e-46, Method: Composition-based stats. Identities = 58/292 (19%), Positives = 105/292 (35%), Gaps = 10/292 (3%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + + L AFT AR GSF++A L LT SAIS+ I+ +E L +LF R + + L Sbjct: 3 SPLLDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLL 62 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR R A ++ + + + Q ++RI + + +L+ K Sbjct: 63 THHGRELLRHAEEIQRQMALARASLGALDQNPRGQIRIG-STPAASQFILPTVLREFKDS 121 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FP I++ + ++A+ D +D + F +P HP Sbjct: 122 FPLYSISIVPGETPDTLQRLEQGVLDLAVCLRPR--DVARVDCRPLFEDELIFLASPLHP 179 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL----HGQESILVPDFNTKCQCQIL 237 A L I+ + T + L + I + + + L Sbjct: 180 WAQQHPKT--KDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEAIKELVKL 237 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA-TQHSATGQVTQWI 288 G G+ + + + LV+ + R + ++A + Q Sbjct: 238 GLGVAMVAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTF 289 >UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=Shewanella RepID=A1RHL4_SHESW Length = 337 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 61/309 (19%), Positives = 119/309 (38%), Gaps = 22/309 (7%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E + FT AR GSFS AA LG++ S +S + +E L V L R+TRS+ LTE+G Sbjct: 30 EPIAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEAGHL 89 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 + + +LL D + ++ +++ I+Q + H L + P ++ Sbjct: 90 LYLQGEELLRDAEQAIASVHNLNDATRGVLKVGISQS-FGAMHIIPALPSFMAKHPELEL 148 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 V+ + + D + ++ + + L G+ + ++ +PD+ +A E Sbjct: 149 QVS--LLDHKVDVVSEG-LDLLLTMSEQLPL--GMVARPLMKCQFLLVASPDY-VAKHGE 202 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE---------SILVPDFNTKCQCQILG 238 P QL + ++ + H + W + + V + I G Sbjct: 203 PTRPEQLVDHNCLVYQGEWH---EHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISG 259 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNP--RQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 G+ +L Y++ + +T+ LV + + + F + Sbjct: 260 LGVVYLASYLMEDEITKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIE-FIKDH 318 Query: 297 ILTGIYQDL 305 I Y D+ Sbjct: 319 IGNPPYWDI 327 >UniRef50_A6CVI9 Transcriptional regulator, LysR-family protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CVI9_9VIBR Length = 301 Score = 186 bits (474), Expect = 7e-46, Method: Composition-based stats. Identities = 62/299 (20%), Positives = 121/299 (40%), Gaps = 12/299 (4%) Query: 3 SIFTEE--NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 + T L AF AA GSFS AA ++ T SAIS TI +E ++ LF R+TR+ Sbjct: 10 DMLTVNLLQLQAFVLAAETGSFSAAARKMKKTHSAISMTISNLELDVNQALFDRATRNPT 69 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G ++A +L +R + + E + ++ + P +L +L Sbjct: 70 LTAAGEVLLKEAKLVLAQCENFERLANELDPEEETEFTLALDSVYSVPME-KEILTLLAD 128 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++ + + +GV +++ +ANI + + + + + + +P+H Sbjct: 129 KFPKLKLKLVEKPSSGVIASVVKGEANIGFTLLEQPI-FSNLGSIALPSAELLYVASPEH 187 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + E + L+ + +H +N K + + G Sbjct: 188 PLAKL-EKVTLVDLQRHRQ---AYLSHDVNVKGTSI--SANVWECESISAAKTAIAYGTC 241 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNP--RQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 G + +R +T LV + + + L+ +G+V I+ + + Sbjct: 242 WGMAVEPFIRPQITSGQLVKLNVESSLKKSIPAALIWKIGDESGRVHSAIRALYTERKL 300 >UniRef50_B0T3V7 Transcriptional regulator, LysR family n=1 Tax=Caulobacter sp. K31 RepID=B0T3V7_CAUSK Length = 294 Score = 186 bits (473), Expect = 7e-46, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 112/281 (39%), Gaps = 9/281 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + AF T A SF++AAE LGL+ A++ I++ E L + LF RSTRS+ELT Sbjct: 3 ITLGQIRAFVTVASTFSFTRAAEVLGLSQPALTNRIRQFEESLGLRLFDRSTRSVELTNV 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR L+ +F + ++ VR+ L+ + P+ Sbjct: 63 GRELLPIFRRLVGEFEGAVINARDYASKVKGVVRLACLPSCAA-TLLPDLIARFQIDNPS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 V + + V + ++ + IG D + G ++ T + +HP+A Sbjct: 122 ATFVVEDALNSRVATMVREDRVDFGIGMADG--EAGDLELTRLFDDTLQVVHPREHPIAQ 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESIL----VPDFNTKCQCQILGEG 240 P I L YP I++ + + G L + V +T G G Sbjct: 180 AP-VIDVETLSHYPLILMNRGSSVRDLVEGAFLAAGRTATPACEVTYMSTAVALVRAGLG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT 281 + LP V E +Q + R I +P ++L + +A Sbjct: 239 LSILPSTAV-ELRSQPDVAARSIDDPAFVRTLVLVRRRNAP 278 >UniRef50_A6CXR5 LysR, substrate-binding protein n=1 Tax=Vibrio shilonii AK1 RepID=A6CXR5_9VIBR Length = 295 Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats. Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 6/291 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSIELT 62 + E L A GSFS AA +L ++ SA++ ++ ME + + LF R + +S LT Sbjct: 2 LLNTERLQYLVCIAETGSFSAAARKLNVSASAVNQAVQAMEIDIGIRLFERVAGKSPSLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G+ + +A +++ AI+R+ + G E + I + + P+ T L+ L QF Sbjct: 62 PEGKALYFQALEIVPRLQAIERKARALQSGEEPSLTIATHSMTLYPRFT-ELMSSLTLQF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + + + + A+I I AP L G + I I W F +P+HPL Sbjct: 121 PELELILVDAEKHQLSTNDESLGADIMI-APGGLCPQRGSNAQIIDNIEWCFITSPNHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + I L YP ++ + ++ + L I + + G G Sbjct: 180 AKLKGEITPEDLEHYPQLLSLEGKVATSELLESLRFSPRLIRYETPDQLQDMLLYGAGFA 239 Query: 243 FLPDYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKKQ 291 P + + + L+ + ++ + L+ + S G V W +Q Sbjct: 240 AYPIKLAQPFIDHGLVTKLNVGHYDSSMVWPVELSWR-SGLGIVGTWFIEQ 289 >UniRef50_A1WHL2 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=A1WHL2_VEREI Length = 305 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 52/302 (17%), Positives = 114/302 (37%), Gaps = 18/302 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN F ++ AF A GSF AA+ L ++ A+S ++++E + LF R+TR +E Sbjct: 1 MN--FDLSDMRAFVAVADLGSFRAAAQTLHISQPALSRRVEKLEQAMGFRLFERTTRKVE 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L+ GR F KA +L++ + +S + +V + P A ++ ++ Sbjct: 59 LSAIGRSFVPKARHVLSELENALLGMTDMSDRLRGQVTVACVPS-SVPHLLAGAVEAFQR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++ + E + A++ ++A+ + +++ + + A P H Sbjct: 118 KFPRIRVRLIDETATEILLAVVRSEADFGVSYWGA--QEPDLEFQGLVQEPFVLACLPGH 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTA--HTINKKVGWLLHGQESILVP--DFNTKCQCQI 236 PLA + ++L + + + + + + Sbjct: 176 PLARKRR-VKWAELAQHDCVTLPPGTGNRMLIDQALSTVAYPPRWTCEARHVPALLSLIE 234 Query: 237 LGEGIGFLPDYMVR----EAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G G+G +P + +R + LV ++ + ++ + Q Sbjct: 235 AGVGVGAVPRFAIRGGQGATLASVRLVEPEVTR----TIGVIKRRARPLMPAAQAFHDLL 290 Query: 293 AP 294 Sbjct: 291 VA 292 >UniRef50_A0KNZ5 Transcriptional regulators, LysR family n=2 Tax=Aeromonas RepID=A0KNZ5_AERHH Length = 293 Score = 186 bits (472), Expect = 9e-46, Method: Composition-based stats. Identities = 63/288 (21%), Positives = 114/288 (39%), Gaps = 7/288 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + F +A GS + A LG + SA+S I +E L V LF R LTE Sbjct: 1 MKLYQIQLFVESASSGSIANTARRLGKSRSAVSTAIAALEVELGVELFERGANQSRLTEI 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G LL ++K + + + G E +R+ + + +L L+ QFP Sbjct: 61 GEQVLDDCKRLLQAANSLKLKCEHYASGAEVALRVARDDAIPEAVW-REMLGALRHQFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I++ + + + A G + G++ + IR +AP HPLA Sbjct: 120 TSISLVLASPPELPALVEEGFVDAAFGLITEEQERSGLNIEVLNPIRTLMVVAPSHPLAS 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + + L + + + K + L G I + F + G G L Sbjct: 180 LKRVL-QQDLTGHTQVTLSYVDEFSVKSL--LPIGGHHIGLSSFELMRDAVLDGLGWAVL 236 Query: 245 PDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKK 290 P +++ + Q L+T + +D + L ++++ G+V W++K Sbjct: 237 PSPLIQSQLRQGELLTLKHKFSLQWRDYGVYL-SENAYHGKVLAWLRK 283 >UniRef50_D0J615 Transcriptional regulator, LysR family n=2 Tax=Comamonas testosteroni RepID=D0J615_COMTE Length = 306 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 118/293 (40%), Gaps = 9/293 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 +++ + ++L A ++ SF +AA + L+ SA+S I R+E + LF R+TR++E Sbjct: 2 VDANLSTKDLRAVVALSQTKSFGQAALLVHLSQSALSALIARVEAQIGARLFERTTRAVE 61 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT++G F A ++L D R + Q V + L ++ + Sbjct: 62 LTDAGHVFIAHAQEILRDTQRALRAVTDTVQLRTGSVTVAALPSLAA-SLLPKVFAEFTR 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++++ + +D + + + + A+ A D + Y ++ ++ DH Sbjct: 121 IHPGVRLSLLDTLSGPAFDLVRDGKVDFALTAAD--PKQEDLAYEQLMEDQFFLICPDDH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQI 236 PL+ P+A YP++ + +A L L+ V T Sbjct: 179 PLSKHAGPVAIENTLDYPHVSMPSSASVRQYIDADLHSKGLYFAPVFEVDHIATIGALVS 238 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWI 288 G GI LP+ V + LV + P + ++ +H+ + + Sbjct: 239 AGLGISALPETAV-SLLQAGRLVQIPLSPPGIQRPLGMVMRRHAPRSSAAKAL 290 >UniRef50_Q1AUB8 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=Q1AUB8_RUBXD Length = 320 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 51/281 (18%), Positives = 114/281 (40%), Gaps = 9/281 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F AR G+ S+AAEE+ LT ++ +K +E L LF R++R + LTE+ Sbjct: 1 MLYRQLECFLAVARTGNLSRAAEEMYLTQPTLTARLKALEEELGDQLFVRTSRGMRLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F A +++ F KRR++ + ++ + + + T LL+ +P Sbjct: 61 GREFLPYAERVVSSFEEGKRRLEELRGASGGKLVVGASPGVGT-YALPGLLERFVGAYPK 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++V T + + ++ + ++ + + ++ + +AP+H Sbjct: 120 VNVSVRTGHSEDILEMVLREEVHLGLT---REMRHPEVESVPLYEDELVLVVAPEHRFTQ 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ----ESILVPDFNTKCQCQILGEG 240 +++ I+ ++ + + ++ V + + G Sbjct: 177 RGSA-GLAEIGEEQLILFDNDSSYYEQTQALFTSAGIRELRTLEVDNIEAAKRMVEHRLG 235 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT 281 I FLP + A++ LV ++ + + +R ++A + Sbjct: 236 IAFLPRSAIVRAVSAGNLVLIRVEDGPEMTRSIVALRRRDA 276 >UniRef50_B1ZVT1 Transcriptional regulator, LysR family n=3 Tax=Verrucomicrobia RepID=B1ZVT1_OPITP Length = 321 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 8/289 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + LLAF AR SF+ AA+EL LT SA+S+ IK +E + L R+ R + L Sbjct: 9 SRPLDSRQLLAFAALARCQSFTLAAKELFLTQSAVSHAIKALEAEVGSRLVDRANRRVLL 68 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T++G F R +L + A + +D +S+ R+R+ + +L+ K+ Sbjct: 69 TQAGEQFLRHVEKILREMEAARAGLDALSRWGHGRLRVGASTTAC-QYLLPTVLREFKQS 127 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FP IT+ + + + +N+ ++AI G D+ + +P H Sbjct: 128 FPKSVITIEPGDHATQVELLQSNRIDLAIMLQPET--RGEFDFVPLFQDELRLLTSPVHA 185 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES----ILVPDFNTKCQCQIL 237 E L ++ ++T + + + I + + + + Sbjct: 186 WVQQ-ERTTPGSLAAETIVLYNKASYTFRLVTDYFRQERMTIGHFIELGSMDAIKELVKI 244 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQ 286 G G+G L ++ R + LV+ + R +A + + Sbjct: 245 GVGVGVLAPWVARAELENGALVSFPLGRKRLRRTWGIAYLRGRRLPLGE 293 >UniRef50_A1TIL9 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=A1TIL9_ACIAC Length = 323 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 116/295 (39%), Gaps = 13/295 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ +++ F GSFS AA L SA+S TI +E LDV LF R R + T + Sbjct: 3 FSSDSVNVFLAVLDHGSFSAAARALSRVPSAVSMTIAHLEAELDVRLFDRGGREPQPTAA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 R +A L + + ++QG+E R+ I I L T T L L ++P Sbjct: 63 ARALEPQARLLAAQLRQLNAQALALTQGLEERLTIAIAPELLTGPWT-EALAALTAEYPQ 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL-- 182 Q V + +A +A+ + LDG + E+G+ IAP HP+ Sbjct: 122 LQAEVLAAPQADAMALLHAGRAQLALVFERSSLDGRE-GFQEVGSETLVAVIAPQHPVMQ 180 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P++E+ L I+V + + + + + + G G G Sbjct: 181 AAAGAPLSEAHLTTTRQIVVA--GRDLAQTDPRFVFARHHWRTDNHLAALRLIEAGLGWG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRML---LATQHSATG----QVTQWIKK 290 + P +V + L+ N + + ++ G + +W+++ Sbjct: 239 WQPRELVEPGIQAGTLMEMPFDNLSNGVELWVDVVWSKERPQGLGARRFVEWLRQ 293 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 12/258 (4%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 ++ A F+ AA LG++ SA+S I ++E L LF RSTR++ LTE+G +F Sbjct: 6 DIPVVVAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHF 65 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 + A + + + + + R+R+ + + + H A L+ ++P I Sbjct: 66 YSHAVRAQEAAQEAEDSVLALQEAPKGRLRVNVP-MAFGRLHVAPLISGFLARYPGVSID 124 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 + V + + + ++A+ L + +I A+R AP + LA P Sbjct: 125 M---VMDDRMVDLFADGFDLALRG--GTLADSALVARKIAALRNVLVAAPTY-LARHGAP 178 Query: 189 IAESQLRLYPNIMVEDTAHTIN-----KKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 S LR + + + S V + + + G GIG Sbjct: 179 QTVSDLRFHNCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGR 238 Query: 244 LPDYMVREAMTQSLLVTR 261 LP + + LV Sbjct: 239 LPTFTAGPDLASGRLVRV 256 >UniRef50_Q4K6W0 Transcriptional regulator, LysR family n=14 Tax=Pseudomonas RepID=Q4K6W0_PSEF5 Length = 298 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 66/300 (22%), Positives = 114/300 (38%), Gaps = 11/300 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + L F A GSFS AAE L + SA+S IK +E L LF R+ R LT Sbjct: 1 MISTRQLRYFVEIAECGSFSAAAERLFVAQSALSRQIKELENQLQTPLFERTARLPRLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G FF KA +LL++ + + G +R+ + + + + + P Sbjct: 61 AGEAFFPKARNLLSELHKASELATQVGMGQLGTLRLSHSSTVPMSGRLLQGIGSYLQHCP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + + +I + L G+ T + A A+ P HPLA Sbjct: 121 GASMDIAKLSSEAQLEELAQGHLDIGLLRLPVLRQRAGVQITPLFAEPLLLAVPPQHPLA 180 Query: 184 FVPEP--IAESQLRLYPNIMVEDTAHTINKKVGWLL------HGQESILVPDFNTKCQCQ 235 P + +QLR I + + L + + ++ T+ Q Sbjct: 181 LAPPAGGVDLAQLREEAFISIPHPQRGGLSYLSAELCMRQGFFPRAARVMSRKTTQLQLI 240 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G GI LP+ M + + + + + + S + LA + T V Q + F + Sbjct: 241 QAGFGIALLPESM--QDIAPASIRFLPLADADCQSTVALAYRQEPTPLVAQ-FVEHFCNH 297 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 107/293 (36%), Gaps = 13/293 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A F++AAE LG+ +S I+R+E + LF R +R +ELTE+ Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A +L + +S+G +R+ Y +++ + + P Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + D ++ + + A P ++ +D + + HPLA Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAFIRPP-IVSADELDVELLVKEDMVVVLPHSHPLAR 179 Query: 185 VPEPIAESQLRLYPNIM--------VEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 EP+ S L ++ + D + ++ G+L + P + Sbjct: 180 AGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQE--APQIVSIAPLVG 237 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIK 289 G G+ +P + + +V I + + LA + V + + Sbjct: 238 AGFGVSIVPRSTTQ--IQTDEVVYLPIAGNAPKAPISLAWRRHNPSPVVRLFR 288 >UniRef50_A1AYK1 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AYK1_PARDP Length = 300 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 68/313 (21%), Positives = 123/313 (39%), Gaps = 24/313 (7%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MNS T L AF +A SF++A LG+++SA+ T+ R+E L V LF RSTR+I Sbjct: 1 MNSFGT---LAAFVHSAETRSFTEAGRRLGISSSAVGKTVARLEEELGVRLFHRSTRAIT 57 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F + + +F KR + + + ++R+ + Q+ H L ++ Sbjct: 58 LTAEGCRFLDRCYRIFAEFDDAKRELTQAAGKPQGKLRVGLPQIGI---HLMPHLIAFQR 114 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FP ++ + ++ ++ + + + L+ + + AP + Sbjct: 115 TFPEIELEL---DFSDRLVNLVEEGFDAVMRIGE--LNDSRLTMRRLDGYHHRLVAAPAY 169 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ---------ESILVPDFNTK 231 LA P ++L + + T K W L+G+ +S + ++ Sbjct: 170 -LAHRGTPDRPAELMDHACLRYRYP--TTGKLAPWPLNGRGGAPSIDPPQSSVTNSIDSL 226 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLL-VTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 + G GI LPD++V +A+ L V H + +L T + Sbjct: 227 LEMVQAGLGIALLPDFIVADAVAAGRLTVVLDRHGQDRRDFCILWPSSRHTAPKIKAFVD 286 Query: 291 QFAPNGILTGIYQ 303 G Q Sbjct: 287 FMVSRLGAAGALQ 299 >UniRef50_Q4KCL2 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCL2_PSEF5 Length = 302 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 108/283 (38%), Gaps = 15/283 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F + + GS A E LGL+ SA+ + R+E L V L RSTR I LT+ Sbjct: 1 MDNLNGLQVFVSVVQSGSLVGAGERLGLSASAVGKALARLEQRLGVRLLNRSTRRISLTD 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F+ + ++ + + + IS R+R+ + + Y + +L ++P Sbjct: 61 EGALFYERGQRIVAEVQEAEAELARISDKPRGRLRVSLPAIGY--RMLLPILPEFSARYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + +N +I + I + + L + +G + AP + A Sbjct: 119 DIELDL---DFNDRLIDVIAEGVDAVIRSGE--LPDSQLKSRNLGPFGFVLVGAPGY-FA 172 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQI 236 P L + + + ++ ++ L ++ + + Sbjct: 173 RRGTPRTPRDLEQHACLRYKFPGGSLLQQWSLRLPDGAPPLVLGSALTSNNLESLIHAST 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 G GI ++P+++V A+ LV ++ + + S Sbjct: 233 QGLGIAYVPEFVVCGALADGSLVAVLDDYQQERGKFSILWPSS 275 >UniRef50_A4XVX3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas aeruginosa group RepID=A4XVX3_PSEMY Length = 306 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 7/257 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ L FT SF++AA LG+ S +S I +E L V L R+TR + LTE Sbjct: 1 MGLDDALIFTRVVECHSFTQAATSLGMQKSTVSRRIALLEERLGVRLLNRTTRKLRLTEV 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ ++ + ++ DF ++ + + + +RI + + + R+L +Q+P Sbjct: 61 GQAYYERCRQIMLDFAEAEQAVMQLQREPSGLLRIT-SPIEFGQLFLGRVLGEFMRQYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 V E+ + D + +IAI + ++ +P + LA Sbjct: 120 IDAEV--ELTSRSVDPLEEG-VDIAIQV--GQPQDSTLIARKLFESGRRLCASPAY-LAA 173 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P + ++L + I+++ A +G L Q + + + + G GI L Sbjct: 174 HGTPRSVAELEGHRAILLQHDAPRYWPLLGEHLPCQRVMTCNNITFAREATLAGAGISGL 233 Query: 245 PDYMVREAMTQSLLVTR 261 P + EA+ LV Sbjct: 234 PVMISEEAVRSGRLVEL 250 >UniRef50_B1Z4Z1 Transcriptional regulator, LysR family n=5 Tax=Proteobacteria RepID=B1Z4Z1_BURA4 Length = 313 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 110/291 (37%), Gaps = 10/291 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M F +L AF GSF KAA+ + ++ A+S I ++E L V LF R+TRS+ Sbjct: 1 MGINFDLTDLQAFRAVVELGSFRKAADAISISQPALSRRIDKLEEALGVRLFERTTRSVT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT GR F A LL+D I +S V I + ++ + Sbjct: 61 LTTVGRVFAPSAEQLLDDLDVALLGIRDVSSSRLGHVTIACVPSV-AYYFLPNVIASYHR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP ++ + N V A+I+ +A+ + + ID+ + R+ A DH Sbjct: 120 RFPRIRVKLLDAGANEVLSAVISGEADFGVSFMGS--QEPEIDFKLLLQERFVAACRRDH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES----ILVPDFNTKCQCQI 236 PLA + ++L Y + V+ T+ L T Sbjct: 178 PLARKKR-VTWNELYEYEYVSVDKTSGNRLLLDQALTTVAPRAPSVCETRHVTTLLGLIE 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQ 286 G G+ +P M LL + + P R+ ++ + + Sbjct: 237 AGLGVAAVPS-MAMPGHDHPLLTSVPLVEPVVKRRVGIVKRRGRPLTPAAE 286 >UniRef50_Q9CNM4 HpkR n=1 Tax=Pasteurella multocida RepID=Q9CNM4_PASMU Length = 289 Score = 185 bits (471), Expect = 1e-45, Method: Composition-based stats. Identities = 58/294 (19%), Positives = 114/294 (38%), Gaps = 15/294 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E L AF GS S AA +LG SA+S + +E L+ LF RS + LT Sbjct: 1 MYNLEQLKAFVAVCENGSISAAARKLGKAQSAVSSAVANLEIALNQTLFDRSKNAAHLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +L + +++ +S+ E R+ I L+ + ++ L ++FP Sbjct: 61 NGAALLPMVKHVLQQIHYFEQKATALSEPQEYRLSIAFEDTLWDEQ-LTKIFVKLHQRFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + I + NI I + + + +G R+ A AP HPL+ Sbjct: 120 HTQLDLQLSTAAEIRSKIEQGELNIGILYQNQV--QSDLPVQLLGQQRFVAAAAPSHPLS 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + E + + L + + I++ + + + G G Sbjct: 178 QLTE-VNNADLAHFVQL--------IHRNADITPISPQYWQINSYYLMMDLVNQGIGWAI 228 Query: 244 LPDYMVREAMTQSLLVTRQIHN---PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 +P+ ++ + S L + P+ + + G+VTQ++ + Sbjct: 229 MPEQLLVDEFLGSQLNRLPLTALLHPKPLDITAMTAFNHYHGKVTQFVLAELKE 282 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P77700 Uncharacterized HTH-type transcriptional regulat... 312 9e-84 UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteri... 288 2e-76 UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=D... 284 3e-75 UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=... 282 1e-74 UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=M... 279 6e-74 UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=M... 279 7e-74 UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=... 277 4e-73 UniRef50_UPI000197C658 DNA-binding transcriptional activator All... 274 2e-72 UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hon... 272 9e-72 UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=... 272 9e-72 UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=g... 272 1e-71 UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax... 272 1e-71 UniRef50_A4BES5 Transcriptional regulator, LysR family protein n... 271 2e-71 UniRef50_Q7NS01 Probable transcriptional regulator, LysR family ... 271 3e-71 UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 269 6e-71 UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=... 269 1e-70 UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulat... 268 2e-70 UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n... 268 2e-70 UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronoba... 267 3e-70 UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=... 267 5e-70 UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=... 266 7e-70 UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=P... 266 8e-70 UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=... 266 1e-69 UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bo... 265 1e-69 UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of ... 264 2e-69 UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=C... 263 5e-69 UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ... 263 7e-69 UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales ... 262 1e-68 UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=... 260 4e-68 UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=L... 260 5e-68 UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=M... 260 5e-68 UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=S... 260 6e-68 UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=A... 259 6e-68 UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n... 259 8e-68 UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=... 259 9e-68 UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Pr... 258 1e-67 UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=V... 258 1e-67 UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria... 258 2e-67 UniRef50_C7JFW5 Transcriptional regulator LysR n=8 Tax=Acetobact... 258 2e-67 UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacteriu... 258 2e-67 UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=B... 258 2e-67 UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=C... 257 3e-67 UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=... 257 3e-67 UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n... 257 4e-67 UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=... 257 4e-67 UniRef50_B8GUA3 Carbonate dehydratase n=1 Tax=Thioalkalivibrio s... 256 5e-67 UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=C... 256 7e-67 UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=C... 256 1e-66 UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=P... 256 1e-66 UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=R... 256 1e-66 UniRef50_P76369 Uncharacterized HTH-type transcriptional regulat... 255 1e-66 UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=R... 255 1e-66 UniRef50_A4G228 Transcriptional regulatory protein, LysR family ... 255 1e-66 UniRef50_P30864 Uncharacterized HTH-type transcriptional regulat... 255 2e-66 UniRef50_A8U3M8 Transcriptional regulator n=2 Tax=Bacteria RepID... 254 4e-66 UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobac... 253 5e-66 UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n... 253 7e-66 UniRef50_C9QE28 Transcriptional regulator n=3 Tax=Vibrionaceae R... 252 8e-66 UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=... 252 9e-66 UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=M... 252 1e-65 UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=P... 252 2e-65 UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=P... 251 2e-65 UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=D... 251 3e-65 UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=F... 251 3e-65 UniRef50_A8G163 Carbonate dehydratase n=14 Tax=Gammaproteobacter... 251 3e-65 UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=C... 250 4e-65 UniRef50_B9JB94 Transcriptional regulator protein n=3 Tax=Proteo... 250 4e-65 UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum ... 250 4e-65 UniRef50_Q2RS38 Transcriptional regulator, LysR family n=1 Tax=R... 250 4e-65 UniRef50_A8ZMF1 Transcriptional regulator, LysR family n=1 Tax=A... 250 4e-65 UniRef50_Q4KCL2 Transcriptional regulator, LysR family n=1 Tax=P... 250 5e-65 UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=P... 250 6e-65 UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gamm... 249 7e-65 UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=... 249 1e-64 UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=... 248 2e-64 UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=g... 248 2e-64 UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax... 248 2e-64 UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=... 248 2e-64 UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=P... 247 3e-64 UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=G... 247 3e-64 UniRef50_Q47Y42 Transcriptional regulator, LysR family n=2 Tax=A... 247 5e-64 UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=D... 247 5e-64 UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1... 246 6e-64 UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=M... 246 6e-64 UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n... 246 7e-64 UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=M... 246 8e-64 UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteri... 246 9e-64 UniRef50_C8SVH4 Transcriptional regulator, LysR family n=1 Tax=M... 246 1e-63 UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=B... 245 1e-63 UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2... 245 1e-63 UniRef50_UPI0001745DD5 transcriptional regulator, LysR family pr... 245 1e-63 UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Ta... 245 1e-63 UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=P... 245 1e-63 UniRef50_B4SME3 Transcriptional regulator, LysR family n=23 Tax=... 245 2e-63 UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=O... 245 2e-63 UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=... 245 2e-63 UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=G... 244 2e-63 UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Ph... 244 3e-63 UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=G... 244 3e-63 UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Sy... 244 4e-63 UniRef50_Q885P4 Transcriptional regulator, LysR family n=2 Tax=P... 244 4e-63 UniRef50_B9JHJ1 Transcriptional regulator protein n=10 Tax=Rhizo... 244 4e-63 UniRef50_B7KW28 Transcriptional regulator, LysR family n=6 Tax=c... 243 6e-63 UniRef50_Q5FP23 Transcriptional regulator n=1 Tax=Gluconobacter ... 242 8e-63 UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=L... 242 1e-62 UniRef50_A1AYK1 Transcriptional regulator, LysR family n=1 Tax=P... 242 1e-62 UniRef50_Q2SCX5 Transcriptional regulator n=1 Tax=Hahella chejue... 242 2e-62 UniRef50_P67661 Uncharacterized HTH-type transcriptional regulat... 241 2e-62 UniRef50_B8GS61 Putative transcriptional regulator n=1 Tax=Thioa... 241 2e-62 UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepI... 241 2e-62 UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=... 241 2e-62 UniRef50_D1RNP4 Transcriptional regulatory protein n=1 Tax=Serra... 241 2e-62 UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=M... 241 2e-62 UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=P... 241 3e-62 UniRef50_A4XVX3 Transcriptional regulator, LysR family n=8 Tax=P... 241 3e-62 UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Sy... 241 3e-62 UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseo... 241 3e-62 UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n... 240 4e-62 UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=M... 240 5e-62 UniRef50_Q142A3 Transcriptional regulator, LysR family n=53 Tax=... 240 6e-62 UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=V... 240 6e-62 UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=... 240 6e-62 UniRef50_A0KF63 Transcriptional regulators, LysR family n=1 Tax=... 240 6e-62 UniRef50_C6D9I6 Transcriptional regulator, LysR family n=3 Tax=G... 239 8e-62 UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=A... 239 9e-62 UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Ve... 239 1e-61 UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Sy... 239 1e-61 UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=B... 239 1e-61 UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=G... 239 1e-61 UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae R... 239 1e-61 UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=un... 239 1e-61 UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=P... 239 1e-61 UniRef50_A6GS93 LysR-family transcriptional regulator n=4 Tax=Pr... 238 1e-61 UniRef50_Q88D98 Transcriptional regulator, LysR family n=15 Tax=... 238 1e-61 UniRef50_C6D9Q6 Transcriptional regulator, LysR family n=9 Tax=E... 238 2e-61 UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=A... 238 2e-61 UniRef50_Q1GXZ2 Transcriptional regulator, LysR family n=1 Tax=M... 238 2e-61 UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=D... 238 2e-61 UniRef50_A9ACH3 Transcriptional regulator, LysR family n=16 Tax=... 238 2e-61 UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=C... 238 2e-61 UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=B... 238 2e-61 UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=P... 238 2e-61 UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=... 238 2e-61 UniRef50_A4A494 Transcriptional regulator, LysR family protein n... 238 2e-61 UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=R... 237 3e-61 UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=... 237 3e-61 UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=... 237 3e-61 UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejue... 237 3e-61 UniRef50_A6GPV4 Probable transcriptional regulator transcription... 237 3e-61 UniRef50_Q0A8T5 Transcriptional regulator, LysR family n=2 Tax=G... 237 3e-61 UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Prote... 237 4e-61 UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=P... 237 5e-61 UniRef50_A1JP38 LysR family transcription regulatory protein n=4... 237 5e-61 UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=T... 237 5e-61 UniRef50_Q1QY93 Transcriptional regulator, LysR family n=1 Tax=C... 236 6e-61 UniRef50_A4SJL9 LysR-family transcriptional activator n=2 Tax=Ae... 236 6e-61 UniRef50_Q2KW50 LysR-family transcriptional regulator n=4 Tax=Bo... 236 8e-61 UniRef50_B9J7R4 Transcriptional regulator protein n=5 Tax=Proteo... 236 8e-61 UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding... 236 9e-61 UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=... 236 1e-60 UniRef50_A9IDF8 Transcriptional regulator, LysR-family n=11 Tax=... 236 1e-60 UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Sy... 236 1e-60 UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=R... 236 1e-60 UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=V... 236 1e-60 UniRef50_A5VAW9 Transcriptional regulator, LysR family n=1 Tax=S... 235 1e-60 UniRef50_Q2T3T5 Transcriptional regulator, LysR family n=56 Tax=... 235 1e-60 UniRef50_Q0K5G0 Transcriptional regulator, LysR-family n=11 Tax=... 235 2e-60 UniRef50_A9D356 Transcriptional regulator, LysR family protein n... 235 2e-60 UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax... 234 2e-60 UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=C... 234 2e-60 UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=R... 234 2e-60 UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=C... 234 3e-60 UniRef50_Q0BTM7 Transcriptional regulators, LysR family n=19 Tax... 234 3e-60 UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=A... 234 3e-60 UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=P... 234 3e-60 UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=B... 234 4e-60 UniRef50_Q13L83 Transcriptional regulator, LysR family n=7 Tax=P... 234 4e-60 UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria... 233 5e-60 UniRef50_C4GLH6 Putative uncharacterized protein n=1 Tax=Kingell... 233 6e-60 UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=... 233 6e-60 UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=ma... 233 6e-60 UniRef50_A5G323 Transcriptional regulator, LysR family n=1 Tax=A... 233 7e-60 UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n... 233 7e-60 UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=B... 233 7e-60 UniRef50_A1TZI9 Transcriptional regulator, LysR family n=2 Tax=A... 233 8e-60 UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marin... 232 8e-60 UniRef50_A9FTD5 Transcriptional regulator, LysR family n=3 Tax=M... 232 8e-60 UniRef50_Q316J6 Transcriptional regulator, LysR family n=1 Tax=D... 232 8e-60 UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Ba... 232 8e-60 UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=A... 232 9e-60 UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellula... 232 1e-59 UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n... 232 1e-59 UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Ac... 232 1e-59 UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibaci... 232 1e-59 UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=B... 232 1e-59 UniRef50_A5EG89 Transcriptional regulator, LysR family n=5 Tax=R... 232 1e-59 UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=P... 232 1e-59 UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=D... 232 1e-59 UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=B... 232 2e-59 UniRef50_B9TBP2 HTH-type transcriptional regulator ptxR, putativ... 232 2e-59 UniRef50_A8G9I6 Transcriptional regulator, LysR family n=23 Tax=... 232 2e-59 UniRef50_Q3SJT1 Transcriptional regulatory protein, LysR family ... 231 2e-59 UniRef50_Q7WN36 LysR-family transcriptional regulator n=2 Tax=Pr... 231 2e-59 UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=S... 231 2e-59 UniRef50_B9MI47 Transcriptional regulator, LysR family n=8 Tax=B... 231 3e-59 UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=R... 231 3e-59 UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=... 231 3e-59 UniRef50_Q4UQ95 Transcriptional regulator n=14 Tax=Proteobacteri... 230 4e-59 UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=B... 230 4e-59 UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=C... 230 5e-59 UniRef50_UPI000174499E transcriptional regulatory protein, LysR ... 230 5e-59 UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=... 230 5e-59 UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkhold... 230 6e-59 Sequences not found previously or not previously below threshold: UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=P... 260 5e-68 UniRef50_Q1N119 Transcriptional regulator, LysR family protein n... 254 3e-66 UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=... 247 3e-64 UniRef50_D0I8K6 Transcriptional regulator LysR family n=1 Tax=Gr... 247 4e-64 UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejue... 242 1e-62 UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=H... 241 2e-62 UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=... 241 2e-62 UniRef50_Q0BTZ4 Transcriptional regulators, LysR family n=1 Tax=... 241 3e-62 UniRef50_Q3J9W4 Transcriptional regulatory protein, LysR family ... 240 5e-62 UniRef50_A0NTX9 LysR family transcriptional regulatory protein n... 240 5e-62 UniRef50_A0P156 Transcriptional regulatory protein n=1 Tax=Labre... 238 2e-61 UniRef50_A8GGJ7 Transcriptional regulator, LysR family n=54 Tax=... 237 2e-61 UniRef50_Q2T1K3 Transcriptional regulator, LysR family n=6 Tax=P... 237 3e-61 UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=C... 237 5e-61 UniRef50_D2C366 Transcriptional regulator, LysR family n=3 Tax=E... 236 6e-61 UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=D... 236 6e-61 UniRef50_A8TJ36 Transcriptional Regulator, LysR family protein n... 236 7e-61 UniRef50_A0KIP1 Transcriptional regulator, LysR family n=2 Tax=A... 234 2e-60 UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=... 234 2e-60 UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=D... 234 4e-60 UniRef50_Q3KDQ1 Putative LysR family transcriptional regulator n... 233 6e-60 UniRef50_Q3IZC5 Transcriptional regulator, LysR family n=41 Tax=... 233 7e-60 UniRef50_A8I6W2 Transcriptional regulator n=4 Tax=Proteobacteria... 233 7e-60 UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=B... 232 9e-60 UniRef50_C5BRE8 Transcriptional regulator, LysR family n=1 Tax=T... 232 1e-59 UniRef50_Q3K9A7 LysR-family transcriptional regulator n=4 Tax=Ps... 232 2e-59 UniRef50_D0B618 Transcriptional regulator n=56 Tax=Alphaproteoba... 232 2e-59 UniRef50_D2UGC1 Putative transcriptional regulator, lysr family ... 232 2e-59 UniRef50_Q1LFE8 Transcriptional regulator, LysR family n=15 Tax=... 231 2e-59 UniRef50_Q21Z48 Transcriptional regulator, LysR family n=1 Tax=R... 231 2e-59 UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n... 231 2e-59 UniRef50_A9GJI0 Transcriptional regulator, LysR family n=3 Tax=M... 231 2e-59 UniRef50_B4SP80 Transcriptional regulator, LysR family n=10 Tax=... 231 3e-59 UniRef50_D1RWQ7 Transcriptional regulatory protein n=1 Tax=Serra... 231 3e-59 UniRef50_Q3KGC9 LysR-family transcriptional regulator n=2 Tax=Ps... 230 3e-59 UniRef50_Q141A4 Transcriptional regulator, LysR family n=2 Tax=B... 230 5e-59 UniRef50_B2UJD9 Transcriptional regulator, LysR family n=2 Tax=R... 230 5e-59 >UniRef50_P77700 Uncharacterized HTH-type transcriptional regulator yahB n=52 Tax=Bacteria RepID=YAHB_ECOLI Length = 310 Score = 312 bits (801), Expect = 9e-84, Method: Composition-based stats. Identities = 310/310 (100%), Positives = 310/310 (100%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE Sbjct: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK Sbjct: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH Sbjct: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG Sbjct: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG Sbjct: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 Query: 301 IYQDLLHREN 310 IYQDLLHREN Sbjct: 301 IYQDLLHREN 310 >UniRef50_Q7MF54 Transcriptional regulator n=20 Tax=Proteobacteria RepID=Q7MF54_VIBVY Length = 307 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 54/312 (17%), Positives = 112/312 (35%), Gaps = 15/312 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+S F+ +L F + GSFS AA++L LT SA+S I +E L L R+TR + Sbjct: 1 MHSQFS--DLPIFVSVVECGSFSSAAKQLHLTKSAVSKRINHLEDKLGSRLLNRTTRKLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G ++ A LN + + R++I + + H A L+ Sbjct: 59 LTEAGERYYEYAAQALNLARQGVDAVTELQGEPRGRLKITAP-MTFGVLHVAPLISEFLS 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P ++ + ++ + ++ I L + + R +PD+ Sbjct: 118 RYPKVEVDLQ---LEDQMVDLVAGRFDLGIRI--GHLPDSNLIAKRLAPCRTVLCASPDY 172 Query: 181 PLAFVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 ++ + P + L + + +N+ + + + + +V + + Sbjct: 173 -VSRMGSPSKPADLAQHNCLRYSYFRGGNEWLFLNQGNEYKVLPKGNFIVNNSEAIRRAL 231 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAP 294 + G GI +P +++ + + LV + + Sbjct: 232 LAGIGIAQMPTFIIGKELRDRKLVNLMPEYQLPQHFLYAVFPERKHMPLKVRMFIDFLNE 291 Query: 295 NGILTGIYQDLL 306 Y D Sbjct: 292 KLGSDAPYWDSA 303 >UniRef50_Q47IM2 Transcriptional regulator, LysR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47IM2_DECAR Length = 303 Score = 284 bits (727), Expect = 3e-75, Method: Composition-based stats. Identities = 90/302 (29%), Positives = 144/302 (47%), Gaps = 2/302 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + + LL R GSF+ AA L SA+S+ I ++E L LF R R L E+ Sbjct: 3 ISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G LL ++RR+ I+QG EA +RI I+ ++ + +L+ + Sbjct: 63 GHTLLEDGRHLLRSASELERRVQRIAQGWEAELRIAIDTIIPVER-IYPMLERFYAAGHS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAI-RWAFAIAPDHPLA 183 Q+ ++ EV G WDA+ ++A++ IGA + GI + ++ FAIAP HPLA Sbjct: 122 TQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIATRLLCRHSQFVFAIAPSHPLA 181 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 EPI S+L + I + DT+ + + L+ GQ+ + VPD K Q+ G GIG Sbjct: 182 AWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIGH 241 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP ++ + LV + + +PR + LA + +G+ W A + + Q Sbjct: 242 LPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQ 301 Query: 304 DL 305 L Sbjct: 302 GL 303 >UniRef50_A8GDV5 Transcriptional regulator, LysR family n=71 Tax=Gammaproteobacteria RepID=A8GDV5_SERP5 Length = 314 Score = 282 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 89/297 (29%), Positives = 158/297 (53%), Gaps = 1/297 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLDVVDAVARTGSFSAAAHELHRVPSAVSYTVRQLEQWLAVPLFERRHRDVELTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F ++A ++ +R+ ++ G +++I ++ ++ + +L+ + FP Sbjct: 61 AGVVFVQEARSVIKKMLDTRRQCQQVANGWRGQLKIAVDIIVKPQRC-RQLVLDFYRHFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+++ +A++AIGA + GGG + ++G +RW ++P HPLA Sbjct: 120 DVELMVQPEVFNGVWDALVDGRADMAIGATRAVPVGGGFAFRDMGDMRWLCVVSPQHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + QLR +P++ +EDT+ + K+V W L Q ++VPD+ + C G +G Sbjct: 180 MMDGLLNDEQLRPFPSLCLEDTSRNLPKRVTWTLDNQRRLVVPDWASALDCLCAGLCVGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 +P + + + LV Q+ P S L Q + W+ + L Sbjct: 240 MPAHQALPLVQRGELVALQLQQPFPASPCCLTWQQNTPSPAMAWLLDYLGDSETLNQ 296 >UniRef50_C6WUP2 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WUP2_METML Length = 304 Score = 279 bits (716), Expect = 6e-74, Method: Composition-based stats. Identities = 88/293 (30%), Positives = 157/293 (53%), Gaps = 2/293 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ + E+L AR GSF+ AAE L SAI+YT++++E L+V LF RS E Sbjct: 1 MSTKLSLESLEVLDAIARKGSFAAAAESLFRVPSAITYTVRKLEEDLNVQLFNRSGHRAE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G ++ +LLN ++ R+ +++G+E + I +N L+ +L Sbjct: 61 LTLAGAELLKEGRNLLNAANELESRVKRVAKGVETELTIAVND-LFDITRIYPILDKFYN 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q +I +T EV+ G WDA+I+ +A+I +G P G IG + +++A+AP H Sbjct: 120 QNFGTRIKLTQEVFGGGWDALISGRADITLGCPGDTPPVSGFTTKPIGLVEFSYAVAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA + +P+ + + + I D++ + + +L GQ+ + +P+ + K Q Q+ G G Sbjct: 180 PLAKIADPLQDEDIIRHRAISSADSSRNLPPRTAGILSGQDVLTLPNMHFKLQAQLAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G++P + ++ L+ +Q+ P+ + LLA ++ G+ QW KQF Sbjct: 240 AGYMPTKIAEHYASKGQLIIKQVAKPKHEVMGLLAWRNDG-GKAQQWFIKQFQ 291 >UniRef50_A1TYX9 Transcriptional regulator, LysR family n=2 Tax=Marinobacter RepID=A1TYX9_MARAV Length = 306 Score = 279 bits (716), Expect = 7e-74, Method: Composition-based stats. Identities = 88/300 (29%), Positives = 140/300 (46%), Gaps = 1/300 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + L R GSF+ AA EL SAISYT++++E L+V +F R+ Sbjct: 1 MHTAITIDALKVLDAIDRKGSFAGAAGELFRVPSAISYTVQKLEEDLNVSIFDRTGHKAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GRY + LL + ++QG E R+RI N LL + + Sbjct: 61 LTPAGRYLLEEGRSLLEAAENLAHTTRQVAQGWETRLRIGFNSLLPAQ-CLFPAIDAFYQ 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + V EV+ G WDA+ + + ++ IGA G +G I + FA+A H Sbjct: 120 LGVPVDVQVVEEVFAGAWDALQSRRVDMVIGADQLSKPAGSFTTKPLGEIPFVFAVAASH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA EP+ ES + +P + DT+ + + Q ++ V + + K Q G G Sbjct: 180 PLAQAEEPLTESDIAPFPAAVAADTSRALPPGHAGIFRRQRTLTVTNIDQKIAIQEAGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 +G+LP +REA+ LVT+ +H PR + LA G+ W + + + L+ Sbjct: 240 VGWLPLPRIREALAAGRLVTKAVHEPRPPIAIHLARHSEDKGKALMWFWNRLSEDQSLSQ 299 >UniRef50_A0KUI9 Transcriptional regulator, LysR family n=18 Tax=Gammaproteobacteria RepID=A0KUI9_SHESA Length = 320 Score = 277 bits (709), Expect = 4e-73, Method: Composition-based stats. Identities = 84/292 (28%), Positives = 148/292 (50%), Gaps = 2/292 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + + L+ + GSFS AAE L SA++YT++++E+ L V LF R + E Sbjct: 24 MLPVMSLDGLIVLDAIDKKGSFSAAAESLFRVPSALTYTVQKLESDLGVKLFERKGQRAE 83 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G+ R+ ++L ++ + + G E+ + + I+ ++ +L+ + Sbjct: 84 LTLVGQLVLRQGREILAATARLEEAVRQLETGWESALTLAIDTVVPDLPLL-KLIAEFTE 142 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 I +T E G WDA+ + +A+IAIG L G EIG + + FA+AP H Sbjct: 143 LGKQVTINITEESLGGGWDALYSGRADIAIGVTGELPKGQ-YHLVEIGMLEFVFALAPHH 201 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA PI L +P+++V D++ + ++ L ++ I VP+ TK + Q LG G Sbjct: 202 PLAQFDHPIPTEALLQFPSVVVADSSTALAQRSSGLFDSRQVIRVPNMQTKIKAQQLGLG 261 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +G+LP +++RE + LV ++ PR + LA + G+ W ++ Sbjct: 262 VGYLPKHLIREELASGALVACKVEIPRPAQPVFLAWRKGNQGKAQAWFAERL 313 >UniRef50_UPI000197C658 DNA-binding transcriptional activator AllS n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197C658 Length = 308 Score = 274 bits (703), Expect = 2e-72, Method: Composition-based stats. Identities = 111/303 (36%), Positives = 172/303 (56%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +E + F T A+ SFS+AA++L +T+ ISY IK +E + V LFTR+TR++ LT Sbjct: 1 MLDQETMTTFITVAQCQSFSQAAKQLYKSTATISYRIKILEEYVGVQLFTRTTRTVNLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G Y + N + ++ I++G+E + I IN LLY P A LLQ L ++FP Sbjct: 61 AGEYLLEHCREWHNWLSNMPNQLRLINEGVEQEITIAINNLLYEPNAVADLLQHLTERFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ +T +VY GVWDA+++N+ +IAIG P + ++ +G I W FA+A HPLA Sbjct: 121 FTRLNITRQVYMGVWDALLSNKCDIAIGVPGSESLDSDMNTLFLGKIDWVFAVANQHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + +++ QLR YP I VEDT+ ++K+ WLL GQ I VPD TK C + G GIGF Sbjct: 181 SIDGILSDEQLRCYPTINVEDTSQVLSKRTAWLLSGQREIKVPDMKTKVLCHLKGTGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP + + + L+ + I PR+ S + LA + G+V + + K F + Sbjct: 241 LPASICKPYIQNQQLIEKSIKRPRRPSPLSLAWNSNQQGEVLKTVVKLFKLRDPIIQSLL 300 Query: 304 DLL 306 + Sbjct: 301 SPI 303 >UniRef50_C1D757 Transcriptional regulator n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D757_LARHH Length = 303 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 107/293 (36%), Positives = 159/293 (54%), Gaps = 1/293 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E L T AR+ SFS AAE L SAISYT++++E + LF R + +ELT Sbjct: 3 IQTEALRVVETVARYRSFSAAAERLHKVPSAISYTVRKLEETIGTQLFLREGKQVELTAE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GRYF A D+L D ++ I + G+E + R+ +N LL A L L ++F Sbjct: 63 GRYFLEHARDILRDLETLQADITQLHGGVEQQFRVGLNNLLNPAP-LAGLAADLHQRFTA 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 C+ + TEVYNGVWDA+I+ + ++AIGAP+ L G + Y +G + W F I+P HPLA Sbjct: 122 CRQSYRTEVYNGVWDALIDRRIDLAIGAPNVLPQGADLSYLPMGEVHWDFVISPQHPLAR 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P+ +L +P I V DTA ++KK WL+ GQ+ I PD K Q I G GIGF+ Sbjct: 182 SHSPLDSRELAAFPAISVMDTAMGLSKKEAWLVKGQKVIYAPDTAAKLQFLIAGVGIGFM 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 P ++ A+ + L+ R + +P+ + ++ A Q G+V + + Sbjct: 242 PRHLCAYAVRKGQLLQRPVVDPKPPTPIMAAWQTRNQGKVLAYAISRLEDPDF 294 >UniRef50_B5Y100 Transcriptional regulator, LysR family n=12 Tax=Enterobacteriaceae RepID=B5Y100_KLEP3 Length = 300 Score = 272 bits (697), Expect = 9e-72, Method: Composition-based stats. Identities = 78/298 (26%), Positives = 140/298 (46%), Gaps = 1/298 (0%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + L+ R GSF+ AAE L T +A+SY I+++E+ LD+VL RS + T++G Sbjct: 4 NFDVLMILDALDRHGSFATAAESLYKTPAALSYMIQKLESDLDIVLLDRSGHRAKFTDTG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R K LL+ ++++ +S G E + I ++ L+ Q P Sbjct: 64 RLMLEKGRQLLSAARDLEKQAQQLSAGWERELAIALDASFPFSALLP-LIAEFYAQNPQT 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + G W+ + ++ A+I +GA + + +GA+ F +AP HPLA Sbjct: 123 RLNFSHHTLAGSWEELTHHGADIILGAINEPPTSAEWSWQTLGALDNIFVVAPAHPLAQA 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 EP+ QL + I++ D+A + LL Q I V DF +K + G G GFLP Sbjct: 183 KEPLTNKQLSQHRAIVIRDSARYCHPLNSNLLDEQPQIGVDDFASKVELLCAGLGCGFLP 242 Query: 246 DYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 ++ R + + L+ + + R+ +A + G +W ++ +L+ +Y+ Sbjct: 243 RHIARPWLEKGSLMEKSVACWREKDITYMAWRSGNDGLAQRWWREALLRGDLLSQLYR 300 >UniRef50_B8KRB7 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KRB7_9GAMM Length = 300 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 1/290 (0%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T E+L R GSFS AA L S I+YT+ +++ L V LF R R LT Sbjct: 4 SRITLESLEVLDAIDRKGSFSAAAASLYRVPSKITYTVNKLQDDLGVTLFVREGRRSVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G+ + +LL+ + + + +G E+R+RI ++ +L + LQ + Sbjct: 64 PAGKLLLEQGRELLDAADRLVEKTKQLERGWESRLRIALDTVLDSDFLLPH-LQAFCDEQ 122 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + +EV G W+A+ ++A++ + A + + G++ I I W FA+AP HPL Sbjct: 123 PDTEVDIASEVLGGTWEALQLDRADLVVAAAEASPESAGVESRPIMTIPWVFAVAPHHPL 182 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P++E + I+V D++ + Q + V K Q G G G Sbjct: 183 AEQAAPVSEDVRLQHRAIVVRDSSREHPAVTLRVFERQPRMTVSSMADKIAVQRAGLGAG 242 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 FLP V + LV + P DS + +A + G+ +W ++ Sbjct: 243 FLPRPRVERLLDTGELVEVPLQEPIPDSLLFIAWRRRDRGRALKWFIERL 292 >UniRef50_A1A8H0 HTH-type transcriptional activator allS n=92 Tax=Enterobacteriaceae RepID=ALLS_ECOK1 Length = 308 Score = 272 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 110/283 (38%), Positives = 163/283 (57%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F E L F A GSFSKAAE L TT+ ISY IK +E V LF R+TRS+ LT Sbjct: 1 MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + +A D L ++ + ++ G+E +V I IN LLY P+ ARLL L +++P Sbjct: 61 AGEHLLCQARDWLGWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVARLLAWLNERYP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q ++ ++Y GVWD+++ ++AIG T +G+++W F +A DHPLA Sbjct: 121 FTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 V EP+ E+QLR +P + +ED+A T+ K+V W L GQ+ I+VPD TK + G GIGF Sbjct: 181 NVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGF 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQ 286 LP + + + LV+R I R S + LA + +G+ + Sbjct: 241 LPKSLCQSMLDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVE 283 >UniRef50_A4BES5 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BES5_9GAMM Length = 307 Score = 271 bits (694), Expect = 2e-71, Method: Composition-based stats. Identities = 72/291 (24%), Positives = 138/291 (47%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 ++ T + L A + GSF+ AA+ L SA++YTI+++E L++ LF RS +L Sbjct: 13 HNPITLDLLRALDAIDKRGSFAAAAQALHKVPSALTYTIQKVEQDLNLELFDRSGHRAKL 72 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T G+ + +L D + + ++ G E + +C++ L+ L++ +Q Sbjct: 73 TPPGKLLLDQGRLILRDIDGLAQSAQKVASGWEPELTLCVDH-LFDVACLFPLVREFNRQ 131 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P +I + +G W+ ++N A++ + +T G D +G FA+A DHP Sbjct: 132 YPFVRINLRQGSLSGSWEQLLNGSADLLLAPANTNPKIDGYDKKNLGEFHMTFAVAKDHP 191 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA + E + YP I+V D+ + + ++I V + + K Q G G+ Sbjct: 192 LAQTASEVTEDMIDDYPVIVVPDSTQMMTPQTVGWTRRTQTISVDNMSEKIAAQKAGLGV 251 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 G+LP++ +R+ + S L+ ++ + L A ++ G QW + Sbjct: 252 GYLPEHRIRKELESSDLIRLRLDD--NHGIALAAWRNGEPGPALQWFIDRI 300 >UniRef50_Q7NS01 Probable transcriptional regulator, LysR family n=1 Tax=Chromobacterium violaceum RepID=Q7NS01_CHRVO Length = 299 Score = 271 bits (693), Expect = 3e-71, Method: Composition-based stats. Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 2/288 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L + GSF+ AAE L SA++YT++++E GL V ++ RS LT + Sbjct: 3 LTLEALQVLDAIEQHGSFAAAAEALFKVPSALTYTVQKLEQGLGVAIYDRSGHRARLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + LL+ ++ R+ +QG E R+RI + L+ + + + Sbjct: 63 GERLLKDGRHLLDAARQLELRVSKQAQGWEDRLRIVVGDLVGFEQLLPS-IADFDRLQSD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ E + G+WDA+ +++A++ IGAP+ G IG + A HPLA Sbjct: 122 TRLHFIRESFGGIWDALYDDRADLVIGAPNQPPP-GDYFTRNIGDYDFVLVAAAGHPLAA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 PEP+ LR Y + V DT+ + + G LL GQ+ + V K + + G G G L Sbjct: 181 EPEPVPPHVLRRYRAVAVGDTSRRLPARTGGLLEGQQVLTVHSSQAKLKAIVAGLGTGHL 240 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 P VR + LV + M A + G+ QW ++ Sbjct: 241 PRSHVRAHLDSGELVEKAEEESGSFPPMCFAWKQEQPGRAMQWFIQRL 288 >UniRef50_C1D5U3 YbbS n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1D5U3_LARHH Length = 317 Score = 269 bits (690), Expect = 6e-71, Method: Composition-based stats. Identities = 99/306 (32%), Positives = 151/306 (49%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 E L F AR GSFS AAE L T +AISY I+ +E + LF R+TRS+ LT Sbjct: 7 RRLDPEALKTFMEVARQGSFSAAAERLNKTPAAISYRIRALEDNMGTPLFERTTRSVTLT 66 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G + T + + + ++ G+E R + IN LL+ + RLL L + F Sbjct: 67 PAGELLLERGTQIFEWMQHLPEELQQVNDGVEPRFHLVINNLLFNAEAVGRLLATLSRSF 126 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 V VY GVWD ++ + AIG P + +G I W ++P HPL Sbjct: 127 SHTAFRVRRAVYMGVWDEMVYGSGHFAIGIPGWHPISDAFETLPLGQIEWVLVMSPAHPL 186 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + +P+ LR YP + VEDT+ ++K+ WLL GQ +LVP K + G G+G Sbjct: 187 AGIQQPLTNDLLRQYPAVNVEDTSERLSKRTAWLLPGQHEVLVPSLRAKIAAHVHGLGVG 246 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 FLP + + + LV +Q+ + R S M LA + +G++ +++ FA L + Sbjct: 247 FLPRSIAEQYVRTRQLVIKQVRHGRTPSPMALAWRREDSGRIGAYLQALFAAEDPLVSPF 306 Query: 303 QDLLHR 308 + + R Sbjct: 307 LNKIQR 312 >UniRef50_C6C726 Transcriptional regulator, LysR family n=17 Tax=Gammaproteobacteria RepID=C6C726_DICDC Length = 335 Score = 269 bits (688), Expect = 1e-70, Method: Composition-based stats. Identities = 46/298 (15%), Positives = 101/298 (33%), Gaps = 13/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +L F GSFS A + L L+ SA+S + ++E L V L R+TR + LTE Sbjct: 1 MNDFSSLPVFVAVVESGSFSAAGKRLNLSKSAVSKRLSQLEERLGVRLLHRTTRQLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++ A L + + + + + +R+ + + +H + LL + ++P Sbjct: 61 AGSDYYDYAQRALQLAQQAEDAVTQLQERPQGTLRVSAP-MAFGLRHISPLLPIFLHRYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + ++ ++A+ L + + APD+ L Sbjct: 120 EVSVDLL---MDDRVVDLVGEGFDLAVRI--GQLPDSSLIARRLAPCFSVLCAAPDY-LQ 173 Query: 184 FVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L+ + + + + + G Sbjct: 174 RTDVPQHIDALKHHNCLFYLYFKGGVEWSFEGPDGPVRFQPHGNYRANNSEALFDALLAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPN 295 GI +P ++V A+++ LV + + + + + Sbjct: 234 VGICQVPKFIVGPALSEGRLVEVLPQYRLPEHSIYAVYPERRHLPAKVRVFIDFLSQH 291 >UniRef50_P0ACR3 Uncharacterized HTH-type transcriptional regulator ydhB n=131 Tax=Proteobacteria RepID=YDHB_ECO57 Length = 310 Score = 268 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 86/289 (29%), Positives = 158/289 (54%), Gaps = 1/289 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +++E +L AR GSFS AA+EL SA+SYT++++E L V LF R R +ELT Sbjct: 1 MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +F ++ ++ +++ I+ G ++ I ++ ++ P+ T +++ + F Sbjct: 61 AGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV-RPERTRQMIVDFYRHFD 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V EV+NGVWDA+ + + +AIGA + GG + ++G + W+ +A HPLA Sbjct: 120 DVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLA 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + P ++ LR +P+++ EDT+ T+ K++ WLL Q+ ++VPD+ + C G IG Sbjct: 180 LMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGM 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P + + + + V ++ NP DS L Q + W+ + Sbjct: 240 VPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYL 288 >UniRef50_A3Y9M6 Transcriptional regulator, LysR family protein n=1 Tax=Marinomonas sp. MED121 RepID=A3Y9M6_9GAMM Length = 294 Score = 268 bits (686), Expect = 2e-70, Method: Composition-based stats. Identities = 67/293 (22%), Positives = 130/293 (44%), Gaps = 1/293 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L + GSF+ AA L S ++YT++++E L V+F + R LT + Sbjct: 3 LTLDALEVLDAIDKKGSFAAAANALFRVPSTLTYTVQKLEEDLGFVIFRKEGRRSVLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + LL A+ + + G E + I ++ + + +L ++ Sbjct: 63 GRVLLEEGRHLLLATQAMIDKAHQVDSGWEVSLNIALDTVWDIEQLLP-ILAEFQQLNTG 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + EV G +A+I ++A+I +G P G+ + E+ +W A DHPL Sbjct: 122 VEINLLEEVMGGSLEALIEDRADIVLGGPPPSATIQGLQFKEMMQSQWCLVTAKDHPLTK 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P+ + Y +I+++D++ + ++ Q+ I V K G GIGFL Sbjct: 182 TSLPLTNEMMTAYTSIVIKDSSRQSPIQSHRIMAKQKQIKVASMAQKISLIEAGIGIGFL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 P + ++ + + LVT + P Q + + + + G+ +W + + + Sbjct: 242 PRHKIQGKLDEGTLVTLETAEPTQSTPQYCSWKRNNKGKAARWFIDRILSDKV 294 >UniRef50_C9Y5B3 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y5B3_CROTZ Length = 313 Score = 267 bits (685), Expect = 3e-70, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 111/297 (37%), Gaps = 13/297 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + L +F A SF++AA LG++ SA+ + R+E L V LF RSTRS+ LT Sbjct: 9 MDSFTALASFVRTAETLSFTQAARVLGISASAVGKNVARLEQKLGVRLFNRSTRSVSLTA 68 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G + L + + + + R+RI + + L ++P Sbjct: 69 EGATLLARCRPALEQLREAEAELTSATDTPSGRLRISLP--VIGYHLLMPFLPAFAARYP 126 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + ++ +++ ++AI + + + + T +G R+ +P + LA Sbjct: 127 EIDIEL---DFSDRLVNLVDEGFDVAIRSGE--MADSRLTATTLGHFRFVLCASPVY-LA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGW----LLHGQESILVPDFNTKCQCQILGE 239 P L+ + I+ + + + + ++ V + + + G Sbjct: 181 EHGAPQTPDALKKHRCILFRFPSTGLIQPWELTGLTMTGAPSALTVNNIEAMIRAAVAGM 240 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 GI ++PD++V +T+ L + Q + + Sbjct: 241 GICYVPDFIVNSLLTRGELQEVMPGCCERRGAFSALWQTSRYLSPRIRCFVDFLKAH 297 >UniRef50_A9CJD5 Transcriptional regulator, LysR family n=13 Tax=Rhizobiales RepID=A9CJD5_AGRT5 Length = 322 Score = 267 bits (683), Expect = 5e-70, Method: Composition-based stats. Identities = 82/298 (27%), Positives = 135/298 (45%), Gaps = 6/298 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST-RSI 59 M++ T + L F T A GSFS AA L S +SYTI +E L+VVLF R+ R Sbjct: 1 MDANPTLDQLQVFLTVAETGSFSAAARALNRAQSVVSYTIANLEAQLEVVLFERNGVRQP 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LT+ GR A ++ ++ R + QG+EA + + I+ ++ A +L+ + Sbjct: 61 KLTDEGRAMLEDARRIVAGLQEMRARAKGLKQGLEAELSVAISTMVPAEAVVA-VLRDFR 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +QFPT +++ V D +++ +A I IG D + ++G +A D Sbjct: 120 EQFPTVTLSLNVGELGMVMDMVLSRKAGIGIGGAVLRQDD-DLVMEKVGHSFMLPVVAAD 178 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + P+ + +R ++V D + + +L ++ V D TK Q G Sbjct: 179 HPLAQIERPLVLADVREEVQLVVTDASGLTKGRDFNVL-SYKTWRVSDIATKYQLIKGGL 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G G LP +VR +T L ++ + L S G QW+ + F Sbjct: 238 GWGGLPASIVRNDLTNGSLKALELEAYEQGEYPLFTLRRVDSPAGPAGQWLAQAFQER 295 >UniRef50_B2TAV1 Transcriptional regulator, LysR family n=26 Tax=Burkholderia RepID=B2TAV1_BURPP Length = 359 Score = 266 bits (681), Expect = 7e-70, Method: Composition-based stats. Identities = 76/303 (25%), Positives = 142/303 (46%), Gaps = 1/303 (0%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + + E L R G+F+ AAE L S++SY ++++E L V LF R+ R L Sbjct: 53 SMNLSFEVLQVLDAIDRTGTFASAAETLHKVPSSLSYLVQKLELDLGVKLFDRTGRRATL 112 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +GR + LL A++ + I G E+ + + +++++ + K Sbjct: 113 THAGRVVVEEGRRLLEAAEALEFKAKRIEHGWESELHVAVDEIIPFD-LLWHHVGEFYKL 171 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ ++ EV G WDA++ +A++ +GA + IG+++ F +APDHP Sbjct: 172 KLDTRLHLSKEVLGGSWDALLTRRADLIVGAAGDPPPIPNLIARPIGSLKHVFVVAPDHP 231 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA +P P+ + + + + DT+ + + L QE + VP K QI G Sbjct: 232 LASIPGPLTMDMVARHRAVAIGDTSRKLAPRTIALAVNQEVLTVPTLEAKLAAQIRGLAA 291 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 G +P+ + +A++Q LV +++ R + LA + +G+ QW Q ++ + Sbjct: 292 GTIPECLAVDALSQGELVQKEVIGMRDVTHFYLAWRDDESGKALQWWVDQLDRPNLIDEV 351 Query: 302 YQD 304 Q Sbjct: 352 VQQ 354 >UniRef50_Q1H085 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=Q1H085_METFK Length = 300 Score = 266 bits (681), Expect = 8e-70, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 158/297 (53%), Gaps = 3/297 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + E L R GSFS AAE L SAI+YTI+ +E LD+ LF RS + Sbjct: 1 MSIRLSIEALEVLDAIDREGSFSAAAESLHRVPSAITYTIRTLEDDLDIKLFDRSGHKAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G R+ LL ++RR+ ++ GIE +RI I+ LL +L + Sbjct: 61 LTAAGLELLREGRHLLKAAGELERRVRRVATGIETDIRIAISDLLRLEP-LYDILDRFYR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q ++ + EVY G WDA+I+N+A+I+IGAP GGG +G + + FAIAP H Sbjct: 120 QAFGTRVYLQREVYGGSWDALISNRADISIGAPGEGPSGGGYTTRLLGTLEFVFAIAPHH 179 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA +PEP++ ++ + +I D++ + K +L GQ+ + VPD +K QI G G Sbjct: 180 PLADLPEPLSNHDIQQHRSISAADSSRHLPPKTSGILDGQDVLSVPDIPSKALAQIKGLG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 +G+LP + + L+ R++ P+ + +A + G+ QW+ ++ G+ Sbjct: 240 VGYLPRKLAEYHAARGELLIREVAEPKPEVVAYVAWRSG--GKAQQWLLQELQKVGM 294 >UniRef50_Q1LK69 Transcriptional regulator, LysR family n=12 Tax=Burkholderiales RepID=Q1LK69_RALME Length = 342 Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats. Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 1/306 (0%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 N + E+L R GSF+ AA E+G SA++Y ++++E LDV+LF R EL Sbjct: 31 NMPLSLESLEVLDAIERKGSFAAAAHEMGKVPSALTYVVRKLEEDLDVLLFDRRRHRAEL 90 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +GR + LL ++RRI ++ G EA + I ++ L+ ++Q + Sbjct: 91 TPAGRALLDEGRHLLRAADDLERRIKRLATGWEASLNITVDDLVNFRALLP-VIQDFYAE 149 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ + EV G WDA+++N+A++ IG G +GA+ + FA+A HP Sbjct: 150 NTATRLRFSKEVLGGAWDALVSNRADLIIGGAYEAPSTQGFQVRALGAMPFVFAVAAHHP 209 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA V P+ ++ + + V DT+ + + +L GQ+ ++VP K + QI G G Sbjct: 210 LAAVEGPLTTIEIAKHRIVAVGDTSRNLPARTHGVLAGQDVLVVPTMRDKLEAQIRGLGC 269 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 G+LP + + + +L R+ R +A + + G+ QW + + + Sbjct: 270 GWLPAPLAQPHIESGVLQARETVEVRAPGNFKVAWRTNTRGKALQWWTNKLEDPRLAQAL 329 Query: 302 YQDLLH 307 H Sbjct: 330 LLQPPH 335 >UniRef50_Q2L0D3 LysR-family transcriptional regulator n=5 Tax=Bordetella RepID=Q2L0D3_BORA1 Length = 316 Score = 265 bits (679), Expect = 1e-69, Method: Composition-based stats. Identities = 87/300 (29%), Positives = 144/300 (48%), Gaps = 2/300 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E LL AR GSF++AA ELG SA++Y ++++E LD +LF RS +LT + Sbjct: 14 ITPELLLMVDAIARHGSFARAARELGKVPSAVTYAVRKLEDSLDALLFDRSGHRAQLTPA 73 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ R LL+ + R+ I+ G E +RI I+ +L L++ + Sbjct: 74 GQMLLRDGRHLLHSLDDLACRVKRIATGWEVELRIAISAVLPIEP-LFDLMRDFQALQSG 132 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + ++ EV G WDA+ +A++ IGA + GG +G ++ F +AP HPLA Sbjct: 133 TSLRLSEEVLGGAWDALAAGRADLIIGADASGAPSGGYRSVAMGQTQFGFCVAPQHPLAR 192 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + E + Y I+V DT+ + + LL ++ +++P+ K + QI G G G L Sbjct: 193 LGRALTEQDIAQYTAIVVADTSRDLPPRSRGLLPTRDIMVMPNMRAKIEAQIRGLGCGHL 252 Query: 245 PDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 P +A+T+ LV N P ++L A + GQ W + + + Sbjct: 253 PLTRAAKAITEGQLVVCATENLPPPTEQVLYAWRPEHPGQALNWWLDKLKSPRLCERLLG 312 >UniRef50_A1SZL9 Transcriptional regulator, substrate-binding of LysR family protein n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SZL9_PSYIN Length = 301 Score = 264 bits (677), Expect = 2e-69, Method: Composition-based stats. Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 1/294 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E + + GS++ AAE+L SA+SY ++++E L V +F + R LT + Sbjct: 6 ITLEAITVLDAIEKRGSYAAAAEQLNKVPSALSYIVQKLEDQLQVTIFQKQGRRSVLTPA 65 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + +L + + TI+ G E ++ I I+ +L T ++ P Sbjct: 66 GKNLLNEGRVILEAVERLTVKTQTIANGWEPKLNIAIDSILQT-TVIFSVVNDFLTACPN 124 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ ++ E+ NG W+A+ ++ ++ IG P GI + FA++P HPLA Sbjct: 125 VEMDISEEILNGAWEALAEDKIDMIIGVPGPAPKQKGIQTLHLCDFEPVFAVSPTHPLAK 184 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 +P++ + + Y ++ DTA + ++ + VP + K + QI G G GFL Sbjct: 185 QAQPLSNALIAEYRAVVAHDTARNWIAQTQSVISEDKYFYVPSMDYKIRAQIAGIGCGFL 244 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 P ++E + L+ QI R + LA + G+ + +++ N L Sbjct: 245 PRCRIQEFLQNGQLLELQITPTRPAVPLYLAWKVVNQGKALKMLREMLIANKAL 298 >UniRef50_Q3AG49 Transcriptional regulator, LysR family n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=Q3AG49_CARHZ Length = 297 Score = 263 bits (674), Expect = 5e-69, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 104/299 (34%), Gaps = 12/299 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A SFS+AA L ++ AIS I+ +E L R+T+ + LT + Sbjct: 1 MNRNQLEIFRVVAEKKSFSEAARLLHISQPAISMHIQALEEYYGTKLLDRTTKRVTLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G ++ LL+ +R I + I+ ++ + + + LL +++P Sbjct: 61 GEILYKYTLHLLSLMDKAQRDISQAAGIIKGKLILGASLTIGG-HVLPPLLSSFYRKYPD 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 IT+ V + + + ++ + + G + + +A +HPLA Sbjct: 120 VNITMEIMNTEKVLERVSDLTLDLGFV--EGEVTTGELHVEALARDELVVVVAANHPLAG 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 I+ +L P +M E + T L + + + Sbjct: 178 RGR-ISWEELATLPLVMREPGSGTRKVIEERLQAAGFKLPELKIVMELGSTEAIKGAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFAPN 295 G G L + VR + + I N + ++ TQ + + + Sbjct: 237 GLGAAILSKWTVRREINWGIFKQLLIENLPIYREFYVVLNNNKFHSPATQALIQFCREH 295 >UniRef50_Q0EZZ2 Transcriptional regulator n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EZZ2_9PROT Length = 293 Score = 263 bits (673), Expect = 7e-69, Method: Composition-based stats. Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 5/291 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L A G F AAE L + SAIS +K +E L + LF R LT Sbjct: 1 MTLDQLRALCAVVEKGGFHAAAEALYRSQSAISIAVKNLEQELGLSLFDRKGYRPVLTPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + KA +L+ + ++G E + I ++ + + +++ + + P Sbjct: 61 GHVLYGKARSILSRSEDMSSIASHFARGEEPEISIALSAIAPVEQVL-DVIKQISQSAPA 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++++ E G + + + AI ++ + + + + I+PD PLA Sbjct: 120 TRMSLQVENMGGTLERLQEKDVDFAIAEQFVPVEYA--EQVRLTSTQMIPVISPDFPLAT 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 I S L Y ++V DT+ K+ +L G LV DF+ K + + G G G + Sbjct: 178 RYPAITLSDLEAYVQVVVRDTSRNQPKRSAGVLEGAPQWLVNDFDMKKRMILSGAGWGRM 237 Query: 245 PDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 P + V E + L+ + + L G V + + + Sbjct: 238 PRHRVAEELADGRLLALSGKGLDAVKIDMYLFRRTGEPMGPVGERLWQLLQ 288 >UniRef50_Q21E79 LysR, substrate-binding n=2 Tax=Alteromonadales RepID=Q21E79_SACD2 Length = 304 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 11/306 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + E AF GSF+KAAE L + SA+SY I ++E L + T+ R Sbjct: 1 MIPKISLEQWAAFKAVVDEGSFAKAAEALNKSQSAVSYAIAKLEEQLPTPVLTQQGRKAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +R ATDLL I+ ++ G E+ V I ++ L++ LQ Sbjct: 61 LTEAGKQLYRHATDLLAQAATIENTAKYLASGWESEVTIAVD-ALFSMGAVFCALQHFSV 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + +G +A++ +A++ + G T +G + + H Sbjct: 120 SSPQTRLRILETTLSGTEEALLGRKADLVLTGT----IPPGFSGTRLGEVSMIPVVGQQH 175 Query: 181 PLA---FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 PL PI E +L + I++ DT + GW L ++ V T + Sbjct: 176 PLVQLMQQSGPITEQELGRHRQIVLRDTGTKREQSSGW-LRAEQRWTVTHAATSIEAVKN 234 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G G FLP + + + L+ + R S L+ T+ G TQ I +Q Sbjct: 235 GLGFAFLPKEKILQELEAGSLIEVALAEKMERFISLYLIKTERQNAGPATQAIAQQLVER 294 Query: 296 GILTGI 301 Sbjct: 295 YGKPQP 300 >UniRef50_A9VF88 Transcriptional regulator, LysR family n=77 Tax=Bacillales RepID=A9VF88_BACWK Length = 305 Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats. Identities = 48/294 (16%), Positives = 108/294 (36%), Gaps = 10/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F ++ F++AAE+L ++ ++S I+ +E + + LF R + I LTE+ Sbjct: 9 IELRQLEYFLAVSKELHFTRAAEKLNISQPSLSQQIRALEHEVGMPLFDRIGKKISLTEA 68 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + + ++ + I ++ + I + L + KQ+P Sbjct: 69 GRVLLSHSKTIFHEVEQARSAIQDLNGLHHGSLTIG-SLLTVVNYLLPPAILDFNKQYPN 127 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +++V + + ++ N+ +I I + I + + H L Sbjct: 128 IELSVLGLRTGEIREKLLQNELDIGITF--LPVQDKEIVSIPLYKSELTLVVPTSHSLTE 185 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVG----WLLHGQESILVPDFNTKCQCQILGEG 240 ++ +L+ YP I++ + + + + + + Q G G Sbjct: 186 RK-YVSIEELQDYPLILLPKNFYLTELITSHCQNFNFKPKPILEISTMESLIQMVAQGMG 244 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFA 293 I LP + + + + +I NP + L+ + T+ +Q Sbjct: 245 ITVLPKPYI-DFLQNEHIQAIKIENPTPTIDIGLIYRRDKYMCAATRKFIEQLK 297 >UniRef50_B9YZV2 Transcriptional regulator, LysR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9YZV2_9NEIS Length = 311 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 84/298 (28%), Positives = 137/298 (45%), Gaps = 1/298 (0%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E L R GSF+ A E L S+ISY I ++E L V LF R+ +LT + Sbjct: 3 LSLEALEVLDAIDRHGSFAAAGEALFKVPSSISYMIGKLEEDLGVTLFDRTGLKAKLTPT 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ LL A++RR I G E+ +RI ++ +L + + Sbjct: 63 GQAVLEDGRRLLRGAIALERRAKKIEAGWESELRIAVDVILPFRILLP-YITTFYGENSQ 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + EV G W+A+++ +A+ AIGA D + G IG ++ AFA+AP HPLA Sbjct: 122 TRLLFSHEVSGGPWEALLDGRADFAIGALDHAPNLPGFSSCAIGQVQSAFAVAPGHPLAD 181 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 EP+ S + Y + ++DT+ + L GQ+ +LVP+ K + + G G GFL Sbjct: 182 AVEPLDRSVIGQYRLVEIQDTSRQRLLRPLDLQIGQDFLLVPNLEAKLEAVLAGLGCGFL 241 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 P +V+ L +++ PR + A G QW ++ + + Sbjct: 242 PGCLVQHCANLGKLKVKEVKEPRPLKQFFAAWNTGDAGLGVQWWIEKLSQGDFINDAL 299 >UniRef50_C8SMW5 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMW5_9RHIZ Length = 313 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 60/305 (19%), Positives = 107/305 (35%), Gaps = 14/305 (4%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 N++ LLAF A GSF A LG++ SA+ ++ R+E L V L RSTR + L Sbjct: 17 NAMDRLNGLLAFARTAELGSFIAAGRALGISASAVGKSVARLEQELGVRLLQRSTRRVGL 76 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE GR F + +L+D + + + R+RI + Y +L + Sbjct: 77 TEEGRLFDERVRRILDDIDDAEAMLSRTRETPRGRLRISTPIVTY--HLLLPVLSEFMAR 134 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P ++ + +N +I ++AI + + L + + R AP + Sbjct: 135 YPEIELDI---DFNDRVVDVIEEGIDVAIRSGE--LPDSRLVSRPVAPFRMLLCAAPSY- 188 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-----QESILVPDFNTKCQCQI 236 L P + L + I + + + + + Sbjct: 189 LDRHGTPSVPADLIRHFGINFRFLNSGRLLDWPFTTGSAEPQIRSMLTCNNMEALKGATL 248 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPN 295 G GI +PD++VREA+ S L + + + + Sbjct: 249 AGLGIACMPDFLVREALHDSKLRIVLDDHVDGRGQFRMLWPSNRHLSPKVRVFVDFLPER 308 Query: 296 GILTG 300 Sbjct: 309 LAAPR 313 >UniRef50_B6R905 Transcriptional regulator, LysR family n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R905_9RHOB Length = 306 Score = 260 bits (665), Expect = 5e-68, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 104/308 (33%), Gaps = 13/308 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F F+ AA ELG++ SA+S I +E L L RSTR+I LTE Sbjct: 1 MDQISALPVFVMVVEHQGFAAAARELGVSKSAVSKRITLLEEHLGARLLNRSTRNISLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++ +A D L + + + + R++I + + + H A L+ K P Sbjct: 61 AGELYYARAVDALEAAKEAESAVAQMQGKPKGRLKINVP-MTFGRLHIAPLIPKFLKLNP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 I + + +++ ++AI L + +I A +P + L Sbjct: 120 EISID---MIMDDRTIDLVDGGFDLAIRGGR--LKDSSLIARKITPCFNVLAASPQY-LE 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L+ + + + + + + V + + + G Sbjct: 174 EHGTPATPQDLQNHNCLHYAYFSDQHEWTLEDPQGQVRVETSGNYQVNNGDALTTAVLGG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNGI 297 GIG L + E + L + M + T+ + Sbjct: 234 CGIGRLTTFAAGEYLRSGALTQVLPNYTLPTQTMYAVYPNRKYLPTKTRVFINFISEQIG 293 Query: 298 LTGIYQDL 305 Y D Sbjct: 294 SDRPYWDE 301 >UniRef50_A8HAD2 Transcriptional regulator, LysR family n=2 Tax=Shewanella RepID=A8HAD2_SHEPA Length = 304 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 57/309 (18%), Positives = 108/309 (34%), Gaps = 13/309 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + F A FS AA LG++ SA+S I ++E L LF RSTR++ LTE Sbjct: 1 MDTFNAIPIFVAVADSAGFSSAARVLGISKSAVSKRITQLEQQLGARLFYRSTRNLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +++ A+ + + + + ++I + + H A L+ +++P Sbjct: 61 AGERYYQYASQANRAAKQAEDAVSELQGEPKGLLKIQVP-MTIGQMHLASLIPEFIERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 QI + V + +I ++AI A D L + + + ++P Sbjct: 120 EIQIDL---VMDDDEINLIEQGFDLAIRADD--LVDSNLIARLLVPLHSVVCVSPSFYQK 174 Query: 184 FVPEPIAESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 + + SQL I+ + N + + + V + I Sbjct: 175 HRQQLTSPSQLADLNCILYSYSKNADVWQFNANNGDEFKVKVTGNYRVNNSAALRDAVIA 234 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPNG 296 G G LP ++ A+ + LV ++ + Sbjct: 235 GMGAARLPTFVAGAAIQRGDLVAIFKDYTMPSKKLNAIYPERHYLPAKVRVFLDYVIEKL 294 Query: 297 ILTGIYQDL 305 Y D Sbjct: 295 GNGSAYWDE 303 >UniRef50_A8H1R5 Transcriptional regulator, LysR family n=3 Tax=Alteromonadales RepID=A8H1R5_SHEPA Length = 304 Score = 259 bits (664), Expect = 6e-68, Method: Composition-based stats. Identities = 77/300 (25%), Positives = 134/300 (44%), Gaps = 6/300 (2%) Query: 1 MNSI-FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSI 59 MN+ + E LL GS++ AAE+L SA+SY ++++E L V LF R R Sbjct: 1 MNTPPLSIEALLVLDAIEHRGSYAAAAEQLNKVPSALSYIVQKLEEQLGVTLFVRQGRRA 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 LT +G++ + +L+ + + TI+ G E ++RI + ++ ++Q Sbjct: 61 VLTPAGKHLLVEGRKVLSVINTLSEQTQTIANGWEPKIRIACDSIIDINP-IFTVIQQFL 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 + ++ V EV NG W+A+I ++ ++ IGAP + + GI + G + ++ Sbjct: 120 SEHQNIEVDVQEEVMNGTWEALIEDRVDLVIGAPAPVPNQKGIRAIKTGELNSVLVVSKS 179 Query: 180 HPLA----FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQ 235 H LA E S+L Y +++V DTA LL G + V K Sbjct: 180 HELATEALRANEQTQTSELSKYRSVIVHDTAKHEIPWSANLLEGSQHFYVSSITQKIAAI 239 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 + G GIG LP M + + LV ++ N + +A + + G+ +K Sbjct: 240 LAGIGIGHLPTSMAQPYIELGELVVIELENKPAPQDLFMAWKITNKGKGLNRLKAMLLEE 299 >UniRef50_A6G8U4 Transcriptional regulator, LysR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G8U4_9DELT Length = 305 Score = 259 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 10/302 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T + L F + GSFS AA +LG SA+SY I +E +++ LF R+ R LT Sbjct: 4 EPITLDQLAVFLSIVEHGSFSGAARKLGRAQSAVSYAIANLERLIELELFDRTGRKPVLT 63 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E+GR A + + R + +G+EAR+ + ++ PK L ++++ Sbjct: 64 EAGRALLDDARAVHGQVDHLLARAQRMREGVEARLSVAVDVFFPMPKLLT-ALASFRRRY 122 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + + TE V + + + P I+ + I A DHPL Sbjct: 123 PEVPVHLRTEALGAVAQLVADGAVQFGVSVPLRDFP-SAIERRPLWPIEMVTVCAADHPL 181 Query: 183 AFVP---EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 A E + +++R + +++ D + T+ + + G ++ + D K C I G Sbjct: 182 AQRARADEAVPLARMREHTQLVLTDRS-TLTAGLDVAVAGDDNWRLADLPAKQACLIAGF 240 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML----LATQHSATGQVTQWIKKQFAPN 295 G G +P +MV + + LV ++ + ++ + S G +W+ +QFA Sbjct: 241 GWGNMPRHMVEGDLAEGRLVRVEVSEWGPATYIVEMCTIHRAASPPGPAGRWLLEQFARL 300 Query: 296 GI 297 G Sbjct: 301 GA 302 >UniRef50_B5XWH9 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B5XWH9_KLEP3 Length = 305 Score = 259 bits (663), Expect = 9e-68, Method: Composition-based stats. Identities = 57/306 (18%), Positives = 115/306 (37%), Gaps = 16/306 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + +L +F A SF +AA LG++ SA+ + R+E L V LF RSTR++ LT Sbjct: 1 MDSLTSLTSFVRTAETLSFVQAARLLGISASAVGKNVARLEHKLGVRLFNRSTRNVSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F + +L + + + ++RI + + + L + +P Sbjct: 61 EGAAFLTRCQSILEQIQEAESELTSSLSQPTGKLRISLP--VIGYRLLLPALTAFTRLYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + ++ +I+ ++AI + + L + ++G R+ +P + LA Sbjct: 119 QVELDL---DFSDRLVNLIDEGVDVAIRSGE--LADSRLIARKLGGFRFVLCASPAY-LA 172 Query: 184 FVPEPIAESQLRLYPNIMVE-------DTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 P + +L + I + ++ + V + + Sbjct: 173 EYGPPDSPKELAAHKCIFFRFPSTGLIQPWELRDMRLTGDFRAASVVTVNNIEAAIRLSA 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 G GI ++PD++VREAM + L +D + + A Sbjct: 233 AGMGIAYVPDFVVREAMDEGQLQEVLPGCCIKDGHFSVLWPASRYLSPRIRCFIDFMAAA 292 Query: 296 GILTGI 301 I Sbjct: 293 EIPLSP 298 >UniRef50_C8N722 LysR family transcriptional regulator n=4 Tax=Proteobacteria RepID=C8N722_9GAMM Length = 299 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 55/296 (18%), Positives = 110/296 (37%), Gaps = 12/296 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 ++ AF + + GSF+ AA++LGLT S I I R+E L+V L R+TR++ T+ G Sbjct: 5 NLNDITAFVASVKSGSFTAAAKQLGLTRSTIGKRIARLEARLNVRLLQRNTRNLAPTDEG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R F+ + T +L + ++ + S + R++I L+ LL ++P Sbjct: 65 RLFYERCTAVLEELDNAEQCLAQRSIKPQGRLKISAP-LVLGKTILPPLLADFLHRYPQT 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + ++ + +I++ ++A+ + + + + AP + L Sbjct: 124 SVELS---LTDDYADLISDGYDLALRNGNPPQCDS-LIARTVAQQKMLTCAAPGY-LVQH 178 Query: 186 PEPIAESQLRLYPNIMVEDT-----AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P + L + + H K G + + + G Sbjct: 179 GTPQSPDDLAHHQCLHFLHGGRVSRWHFQQKGKETTFQGSGRFSTDNGEALLELALSAFG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 I LP Y+V+ A+ L + P+ M + + + Sbjct: 239 IVQLPHYLVQAALDAGSLKSVLSDFQPKPVPVMAVYPSRKQLSPKVRALVDMMGEA 294 >UniRef50_A5F463 Transcriptional regulator,LysR family n=43 Tax=Vibrionales RepID=A5F463_VIBC3 Length = 302 Score = 258 bits (661), Expect = 1e-67, Method: Composition-based stats. Identities = 79/306 (25%), Positives = 155/306 (50%), Gaps = 5/306 (1%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F++ +L AR GSF+ AAE L SAISY+++++E+ L VVLF R R +ELT Sbjct: 2 MFSKSSLEMLDAVARLGSFTAAAEVLHKVPSAISYSVRQIESELGVVLFRRLPRKVELTP 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F +A LL I+ + + G +++ ++ ++ K +++ + F Sbjct: 62 AGELFMLEARQLLRQMEEIRAQTKRAAHGWRKTLKVTLDNVVKLDK-MKPMVEAFYQTFD 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV+NG W+AI +A+I IGA + GG + ++G + WAF ++P+HP Sbjct: 121 FAELQINMEVFNGSWEAIAQGRADIVIGATAAVPVGGDFEVRDMGILDWAFVMSPNHP-C 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + ++E + + I ++DT+ + K+ Q +L+P++ + + G G+G+ Sbjct: 180 VREQNLSEEFISQFLAICLDDTSSVLPKRHTEHYPKQRRLLLPNWYSAIESLKSGLGVGY 239 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 +P +M + + LV + + + + S L + ++ +W+ G +Y Sbjct: 240 MPRHMAQPLLASGQLVEKVLPDEKLLSHCCLVWRKDDNHKLIEWMVNYL---GSSDQLYS 296 Query: 304 DLLHRE 309 D L + Sbjct: 297 DWLQAK 302 >UniRef50_Q2WAU7 Transcriptional regulator n=7 Tax=Proteobacteria RepID=Q2WAU7_MAGSA Length = 309 Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 54/304 (17%), Positives = 108/304 (35%), Gaps = 14/304 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + ++AF A GSFS+AA LGL+ S IS + +E L V L R+TRS+ TE+GR Sbjct: 5 FDTIIAFVRVAETGSFSEAARRLGLSKSMISRQVSALEADLGVRLLHRTTRSLSPTEAGR 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + + +L D + + R+R+ L + H + L +++P + Sbjct: 65 AYLERCQRILADLDEANLLVSHLQAVPRGRLRVSAP-LSFGIGHLSACLPGFLERYPEIE 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + + ++ ++A+ L + + +R A +P + L Sbjct: 124 LE---MGFTDRHVDLVEEGWDLAVRIGR--LADSSLIVRRLAPVRRMAAASPAY-LERRG 177 Query: 187 EPIAESQLRLYPNI-----MVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 P +L + + + + T + + + + + + G G+ Sbjct: 178 TPRRPEELSAHDCLTHGGRVQSEWRFTGDDGKPVQVEVRGRFHADNGDVLRDMALAGLGV 237 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPNGILTG 300 LP + + + + LV DS + + + Sbjct: 238 VLLPSFFLGDDIRAGRLVPLLEAYVPLDSSLNAVYPHGRHLSPKVRAFVDHL-ATSFGPE 296 Query: 301 IYQD 304 Y D Sbjct: 297 PYWD 300 >UniRef50_C7JFW5 Transcriptional regulator LysR n=8 Tax=Acetobacter pasteurianus RepID=C7JFW5_ACEP3 Length = 305 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 125/302 (41%), Gaps = 17/302 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T ++ F GSF+ AA + L+ + ++ + +ET L V LF RSTR + Sbjct: 1 MLDRIT--SMQIFVKVIAAGSFTGAARLMALSPTMVTKHVTALETRLGVSLFHRSTRHLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR F +L D +++ + + ++R+ + + ++ A L + Sbjct: 59 LTEAGRLFLESCQKILADVENMEQTVSEQYREPRGQLRLNAP-VSFAIRYVAPYLSEFSR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P QI + N ++ ++ + + + + ++ A+R +P + Sbjct: 118 RYPQVQIEL---GLNDRPVDLVEEGWDLTLRIRNLTI--STLRARKLAAVRMVICASPSY 172 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV------PDFNTKCQC 234 LA P +L+ + + + + + + +G++++ V + + + Sbjct: 173 -LAKAGTPTHVDELQHHNCLGYTLSGNNSASRWHFGDNGEKTVSVSGLLCANNGDALREA 231 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML--LATQHSATGQVTQWIKKQF 292 + G GI +LP ++V + + + L+ + P L + ++ + + Sbjct: 232 AVAGAGIAYLPLFVVSQELQRGQLIALSLDYPTTPGPDLHAVYAPGTSIPLKVRAMIDYL 291 Query: 293 AP 294 A Sbjct: 292 AE 293 >UniRef50_Q1Z3S8 Putative conserved protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z3S8_PHOPR Length = 300 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 1/297 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++++L A GSF+ AAE L SA+SYT+K+ME L LF R+ R ++LT Sbjct: 2 PLSKKSLKTIHVIAHSGSFAVAAERLNRVPSAVSYTVKKMEEELGFSLFDRTGRQVKLTP 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+YF ++ +L+ + + R IS G++ I IN ++ L+ L +QFP Sbjct: 62 AGKYFIDQSQWMLDSYEELVRNTAMISSGVDVSFSIAINNIINREDLIP-LIGKLNQQFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + QI+V TEVYNG WDA+ +A++ IGAP + GI Y IG I W F +A HPLA Sbjct: 121 STQISVKTEVYNGCWDALYGRRADLVIGAPHSAPKMEGIVYHSIGNIDWDFIVAQTHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + +LR YP I+V+DT+ I+ + W L GQ+ I P+ T + G GIG+ Sbjct: 181 SQVSALTAEELRYYPVIVVKDTSQHISPQDTWSLTGQKIIYAPELTTAIKMIEHGIGIGY 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P + ++ + Q ++ + I +Q +++ A + V W + + + Sbjct: 241 APHHRIKGKLDQGTILKKAIIEHKQPTQLFYAWHANRESPVLNWCIEYLMSSENHSQ 297 >UniRef50_Q39A93 Transcriptional regulator, LysR family n=9 Tax=Burkholderiales RepID=Q39A93_BURS3 Length = 302 Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats. Identities = 74/298 (24%), Positives = 128/298 (42%), Gaps = 5/298 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + L AF GSFS AA +LG S +SY + +E L + LF R R + Sbjct: 1 MDRSPNLDQLRAFVAVVEAGSFSGAARQLGRAQSVVSYAVASLEAQLGMPLFERGRRRPQ 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G A L ++ + + G+EA + + ++ + PK +Q + Sbjct: 61 LTAAGEVVLADARRLDMLMGQLQAKTAGLRGGVEAELSLAVDVMFPLPKLVEG-MQAFAE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FPT + + E GV + + + I P ID T +GA+ AP H Sbjct: 120 AFPTVALNLAIEALGGVLKLVFDGGCVLGISGPIPNWPDA-IDATSMGALELLTVAAPMH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA PI S+ R + I++ D + + + + ++ + V D K + + G G Sbjct: 179 PLALRDAPIPLSEAREHTQIVLTDRSKVTDGQS-FGIYATRTWKVADLGAKHRLLLAGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDS--RMLLATQHSATGQVTQWIKKQFAPNG 296 G +P +++ + + LV Q+ + R L+ A+G QW+ ++ G Sbjct: 238 WGSMPMHLIEDDLQSGRLVPVQLADRRTFRYGLSLIRRADRASGPAAQWLIDYWSRQG 295 >UniRef50_Q47YE9 Transcriptional regulator, LysR family n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YE9_COLP3 Length = 309 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 107/296 (36%), Gaps = 14/296 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 ++ AF + GSF+ AAE+L + S IS I R+E L V L R+TR + LTE G Sbjct: 10 ELSDVAAFVCVVQTGSFTAAAEQLNTSKSVISKYITRLEKRLGVKLLARTTRRLTLTEIG 69 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R F+ + L + + + ++I L + H A L+ ++P Sbjct: 70 RTFYEGSRQGLEAIDNAEEAVSFLQGKPRGTLKINAP-LSFGALHIAPALEEFIHRYPEM 128 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 QI + + + D I + ++ + L G + I A AP++ LA Sbjct: 129 QIDLRFD--DKKIDMIKDG-FDLTVRITHQL--EGNLIARRIAPCHHALVAAPNY-LAKR 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV------PDFNTKCQCQILGE 239 P L + I + + + + V + + + G Sbjct: 183 GTPKRPEDLVAHNVITYQYQQSPWEWEFTAAKSKPKRVRVNGSVQMNNSLAIREAVLAGV 242 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQD-SRMLLATQHSATGQVTQWIKKQFAP 294 GI +P + V E + L+ + S L+ + + T+ Sbjct: 243 GISRMPTFAVGEDIKSGRLIQLLPKYSLLEHSIYLVFPERNHMAPKTRAFIDYMVK 298 >UniRef50_Q475I4 Transcriptional regulator, LysR family n=25 Tax=Proteobacteria RepID=Q475I4_RALEJ Length = 326 Score = 257 bits (658), Expect = 3e-67, Method: Composition-based stats. Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 8/291 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + + L AF AA GSFS AA LG S IS + +E + LF R+ R LT Sbjct: 29 LSIDQLQAFAAAAETGSFSAAARRLGKAQSVISAAVANLEIDVGNALFDRTGRYPVLTPV 88 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G +A +L + ++ +G+E R+ + +++ LY + LL+ FP Sbjct: 89 GERLLAEARVILERCEHFRGVAMSLGEGVETRLVLAVDE-LYPEETLGGLLEEFSGLFPA 147 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + V ++ A++ I +L + + +G + APDHPLA Sbjct: 148 VELELLFPLMEDVSRLVLEGGADLGIMWRQEVLP-PALGFHALGWVPMQLVCAPDHPLAG 206 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + I +L+ Y +MV T +++ L + V + G F+ Sbjct: 207 -GQRIDWEELKRYRQLMVA--TRTDSEEKMRLRVASDVWWVESQWVIVELVKRRLGWAFV 263 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRM---LLATQHSATGQVTQWIKKQF 292 P ++V + + LV+ + QD + L+ + G+ +W++ + Sbjct: 264 PWHVVANSPAAAKLVSPPLAFQEQDWPVAMELVWLKQRPAGKAARWLRDRI 314 >UniRef50_B6ITN2 Transcriptional regulator, LysR family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6ITN2_RHOCS Length = 311 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 110/312 (35%), Gaps = 17/312 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++L FT A SF++AAE +GL+ SA S I +E L LF R+TRSI LT+ Sbjct: 1 MDRLDDLRLFTCVAETRSFTRAAERMGLSKSAASRRIAELEARLGARLFHRTTRSISLTQ 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F + + +L D + + + +++ + + H + +++FP Sbjct: 61 VGQGFHERVSQILADLEEAEGLVASQHAAPRGVLKLAAP-MSFGLLHLGPAICAFQERFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ V + + +++ ++A+ L + I R +P + L Sbjct: 120 EVQVDV---DLSDRFVDLVDEGYDLAVRIGR--LKDSSLIARRICPARRVAVASPAY-LQ 173 Query: 184 FVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQE---SILVPDFNTKCQCQ 235 EP L + + D +L ++ + + Sbjct: 174 RRGEPATPDALAEHDCLHYSNASVADHWSFRAAPGSEMLRPARPAVTMRANNGDILRTAA 233 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAP 294 + G GI LP ++V + + L + S + + + F Sbjct: 234 VAGRGIAVLPTFIVGDDLAAGRLRAVLLDWTVSPSALHAVYPANRHLSPKVRAFVD-FIA 292 Query: 295 NGILTGIYQDLL 306 D Sbjct: 293 TRFGPEPPWDTA 304 >UniRef50_C6DER6 Transcriptional regulator, LysR family n=12 Tax=Bacteria RepID=C6DER6_PECCP Length = 298 Score = 257 bits (658), Expect = 4e-67, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 104/300 (34%), Gaps = 17/300 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + F A SF A LG++ SA+ ++ R+E L V LF RSTRSI LT Sbjct: 1 MDSLNGFMVFVQVAETRSFVAAGRLLGVSASAVGKSVARLEEKLGVRLFHRSTRSITLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F ++ +L + A + + R+R+ + + +L +++P Sbjct: 61 EGSLFLARSRRILAEIEAAELELSQTKAVPRGRLRVSLPLV---SSLVLPVLGEFMREYP 117 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + +I + + D + +G R+ APD+ LA Sbjct: 118 EIELDL---DFTDRMVDVIEEGFDAVVRTGD--PVDSRLTARRLGTFRFLVVAAPDY-LA 171 Query: 184 FVPEPIAESQLRLYPNIMVE-------DTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 P + L + + + L S++ + T+ + Sbjct: 172 RYGCPQTPADLMQHACLHYRFPNSGKLEPWALRLPPGEPELPLPTSMICNNIETRVCFAL 231 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 G GI +LPD+ +RE + L + + + Sbjct: 232 QGLGIAYLPDFSIREQLAGGQLQPILTDYVERSGVFHVLWPASKHPSPKVRAFVDFLCAR 291 >UniRef50_B8GUA3 Carbonate dehydratase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GUA3_THISH Length = 305 Score = 256 bits (656), Expect = 5e-67, Method: Composition-based stats. Identities = 51/296 (17%), Positives = 108/296 (36%), Gaps = 13/296 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F G F+ AA+ LG++ + +S + R+E L L R+TR I LTE Sbjct: 1 MDRLTGMSTFVEVVNAGGFAAAAQRLGVSRAQVSKAVMRLEAHLGTRLLNRTTRRISLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR ++ + D+L + I+R S R+ + + H +L+ +P Sbjct: 61 TGRVYYERCRDILEEIDEIERIAGEQSDRPRGRLTVSAPTS-FGILHLQKLIPEYITAYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q++++ + + ++ ++AI + L+ + I R F +P++ LA Sbjct: 120 EVQVSLS---LSDRFVDVVAEGFDLAIRIGE--LEDSSLIARRIAPSRRVFCASPEY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L ++ ++ DT + + + + + + G Sbjct: 174 RQGTPKVPQDLAIHACLIYANDLKPDTWTLHGPRGTESVKVNGPVCADNGDILRASALAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFA 293 G+ LP ++V + L D + + + Sbjct: 234 LGVTLLPTFIVGPDLASGRLQQVLHAYCPADISIHAVYPSRRYLSAKVRTFVEFLV 289 >UniRef50_B3PKF9 Transcriptional regulator, LysR family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PKF9_CELJU Length = 330 Score = 256 bits (655), Expect = 7e-67, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 120/296 (40%), Gaps = 8/296 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E A G +++AAE L + S++SY I ++E+ L V +F R Sbjct: 33 ENKVTLEQWRALLAVIDAGGYARAAELLNKSQSSVSYAISQLESALSVKVFQLQGRKAVA 92 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +G +R+A LL +++ +S +E ++I + ++ + + L+V + Sbjct: 93 TPAGELLYRRAKQLLEQAERLEKSAGCLSVQVEPLIKIAADLIIPPARIL-QCLEVFSEH 151 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FP ++ V V +G DA++ Q ++AIG G ++ + + DHP Sbjct: 152 FPETRVEVFESVLSGTEDALLQRQVDLAIGGR----VPPGFMGEKLVTVTMHGVSSADHP 207 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 L + PI +R + I+V D+ + GW + V T +G G Sbjct: 208 LQQLGRPINYEDMRQHRQIIVRDSGQYRRRSEGW-QEADQRWTVSHIKTSLDAIRMGLGF 266 Query: 242 GFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 +LPD E + L + R+ + L G T+ + + Sbjct: 267 AWLPDPYTHEDIAAGRLKYLPVEVGYVREVTTYLTFADRDFAGPATRHLAEVLKQE 322 >UniRef50_B9YZ26 Transcriptional regulator, LysR family n=2 Tax=Chromobacterium group RepID=B9YZ26_9NEIS Length = 318 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 54/300 (18%), Positives = 107/300 (35%), Gaps = 15/300 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + L+ F T A GSFS AA +LG++ +AIS +I R+E L+V LF R+TR + LTE Sbjct: 1 MDTLKALMVFMTTAENGSFSDAARKLGVSPAAISQSIARLEQELEVRLFNRTTRQLTLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR F+ + +N+ A ++ +RI + + L+ ++ P Sbjct: 61 DGRRFYAQCRGPVNNLDAAINQLKASRDEPAGHLRISLPNS-FGRHFILPLMGEFCQRHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + +I + ++ + ++ + + + AP++ + Sbjct: 120 KIRVFF---GLDDHFSDLIEDGYDVGVRV--GMMPDSRLSARHLAQLPLYTVAAPEY-WS 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTI-------NKKVGWLLHGQESILVPDFNTKCQCQI 236 P L + I + L + D C+ Sbjct: 174 KNGRPQKPDDLANHNCINYQFPTSGRLCKWEFERDGERIPLEVNGIYTLNDIEAVCEMAR 233 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLL-ATQHSATGQVTQWIKKQFAPN 295 LG G+ +P + + L + + + T+ A Sbjct: 234 LGFGVAQVPGHEAMPYLRSGELEAVLTDFISLERSIYICFPHREHIAPRTRVFVDYVAEK 293 >UniRef50_A1K9S8 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=A1K9S8_AZOSB Length = 306 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 2/294 (0%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M S T + L R SF+ AAE L SA+SYT+ ++E L V LF RS R Sbjct: 1 MASPITLDALRVLDAIDRKQSFAAAAEALFRVPSALSYTVSKLEEDLGVQLFDRSKRRAV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR + +L + R + + G E +RI ++ +L A L+ + Sbjct: 61 LTPAGRLVLEQGRHILTATEELTRLVQAVGDGWEVELRIAVDSVLDFAPIYA-LVAEFQT 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ ++ EV G WDA+ + ++ + GGI +G + + FA+A H Sbjct: 120 LQHRTELLLSEEVLGGSWDALNTGRCDL-VIGAAGEAIAGGIATRALGEVEFVFAVAAGH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PL + +P+A L +P ++V D++ + + LL G+ ++VP K + Q LG G Sbjct: 179 PLCALAQPLATEALLDFPTVVVADSSRYLPARSTGLLDGRSRVVVPSIARKIEAQCLGLG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 +G+LP + + + L + + +A + +A G+ +W + A Sbjct: 239 VGYLPRHRIGAELAAGTLCELSLEKAHPPQALSIAWRSAARGKALRWFLDRLAA 292 >UniRef50_Q1GM59 Transcriptional regulator, LysR family n=5 Tax=Rhodobacterales RepID=Q1GM59_SILST Length = 296 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 4/298 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+A G+F AA+ L SA+S+ IK++E L LF+R T L+ Sbjct: 1 MTLDQLIALDAIVASGTFRAAADRLNKAQSAVSHQIKKLEDELGFDLFSRDTYRPRLSPE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F+R+ T +L +K + E V I I + LL + + FP Sbjct: 61 GEVFYREVTRVLEQVNGLKTVAAGLRSEQEPLVSIVITATMSLDPILT-LLGEVGRAFPA 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I + TE+ G +++ +A++ I D + ++ +G I +P P A Sbjct: 120 THIKLVTEMMGGPLARLMSGEADLIIAGLDDVPID-EVETRPVGTITIRPVASPAFPAAD 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +++ Y ++V T + LL G + V DF K G G G + Sbjct: 179 PARVKSRREMQSYTQVVVSGTGGKEYDQSRDLLSGGQRWTVSDFQAKISIIKAGLGWGGI 238 Query: 245 PDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P++++R+ + LV I PR + + G+V I GI G Sbjct: 239 PEHLIRDELKTGALVPLAIEGYPPRHTEIFAIRRRDRPMGKVMSRIWDDLGRGGIQDG 296 >UniRef50_P76369 Uncharacterized HTH-type transcriptional regulator yeeY n=105 Tax=Enterobacteriaceae RepID=YEEY_ECOLI Length = 309 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 76/296 (25%), Positives = 139/296 (46%), Gaps = 1/296 (0%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + L+ + GSF+ A+ +L T SA+SYT+ ++E+ L++ L RS + T +G+ Sbjct: 5 LDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESDLNIQLLDRSGHRAKFTRTGK 64 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 K ++L+ ++++ + +G E + I ++ A L++ + + Sbjct: 65 MLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDTFPFS-LLAPLIEAFYQHHSVTR 123 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + V G WDA+ +A+I +GA ++ +G + FA+AP HPLA Sbjct: 124 LKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFGFSRLGDLEQVFAVAPHHPLALEE 183 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 EP+ ++ Y I+V DTA LL QE+I V DF TK + QI G G G+LP Sbjct: 184 EPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQEAITVFDFKTKLELQISGLGCGYLPR 243 Query: 247 YMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 Y+ + + L+ +++ + + G + W + + N + G+Y Sbjct: 244 YLAQRFLDSGALIEKKVVAQTLFEPVWIGWNEQTAGLASGWWRDEILANSAIAGVY 299 >UniRef50_Q1GMA2 Transcriptional regulator, LysR family n=2 Tax=Rhodobacteraceae RepID=Q1GMA2_SILST Length = 305 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 56/299 (18%), Positives = 101/299 (33%), Gaps = 13/299 (4%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 A F+ AA LG++ SA+S I ++E L LF RSTR++ LTE+G +F+ Sbjct: 9 VVVAVAETQGFAAAARRLGVSKSAVSKRITQIENRLGAQLFHRSTRNVSLTEAGEHFYSH 68 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 A + + + + + R+R+ + + + H A L+ ++P I Sbjct: 69 AVRAQEAAQEAEDSVLALQEAPKGRLRVNVP-MAFGRLHVAPLISGFLARYPGVSID--- 124 Query: 132 EVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAE 191 V + + + ++A+ L + +I A+R AP + LA P Sbjct: 125 MVMDDRMVDLFADGFDLALRG--GTLADSALVARKIAALRNVLVAAPTY-LARHGAPQTV 181 Query: 192 SQLRLYPNIMVEDTAHTINKKV-----GWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 S LR + + + S V + + + G GIG LP Sbjct: 182 SDLRFHNCLQYSFSRDFQEWVFDCDGKAETFRPSGSYSVNNGEALREAVLGGTGIGRLPT 241 Query: 247 YMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNGILTGIYQD 304 + + LV + + + D Sbjct: 242 FTAGPDLASGRLVRVLPQCQLPSQTLYAIYPERRYLPTKVRVFIDYLLEHLGGEIAPWD 300 >UniRef50_A4G228 Transcriptional regulatory protein, LysR family n=18 Tax=Betaproteobacteria RepID=A4G228_HERAR Length = 367 Score = 255 bits (653), Expect = 1e-66, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 104/297 (35%), Gaps = 10/297 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F T AR SFS+AAEEL LT A+S +K++E + LF + + I LT G Sbjct: 49 TLRQLKVFETVARLLSFSRAAEELHLTQPAVSTQVKKLEDHAGLALFEQLGKKIYLTPGG 108 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + ++ F + + ++ + + + RLL + Sbjct: 109 TELLHYSRTIIQQFQEAEDAMTQFKGITGGKLNVAV--ISAGDYFFPRLLVEFARSHQGV 166 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + ++ G+ + + NN ++AI + APDH L Sbjct: 167 TLNLSVHNREGLLNQLANNLTDLAIMVRP--PTDMDTINEPFAPHPYVIVAAPDHHLVSK 224 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLL----HGQESILVPDFNTKCQCQILGEGI 241 I S L P ++ E + T + ++ + T Q I G GI Sbjct: 225 KN-IPMSTLIHEPFVVREKGSDTWHSMEDGFGSRIDDLNIAMEIKSTETIKQAVIAGMGI 283 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 FL + + + L + P + ++ ++ V Q + G Sbjct: 284 SFLSAHTISMELQAGSLTVLDVEGFPVMLNWYVVHRKNKRLPPVAQAFRNFLLNEGP 340 >UniRef50_P30864 Uncharacterized HTH-type transcriptional regulator yafC n=94 Tax=Bacteria RepID=YAFC_ECOLI Length = 304 Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats. Identities = 64/296 (21%), Positives = 118/296 (39%), Gaps = 13/296 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +FR+ +L + A + I +RI + L++ ++++P Sbjct: 64 ERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATPVVL-HFLMPLIKPFRERYPEV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +++ V + +I + ++AI A L + + +PD+ ++ Sbjct: 123 TLSL---VSSETIINLIERKVDVAIRA--GTLTDSSLRARPLFNSYRKIIASPDY-ISRY 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHT----INKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 +P L+ + + + A I + G L + + T Q + G GI Sbjct: 177 GKPETIDDLKQHICLGFTEPASLNTWPIARSDGQLHEVKYGLSSNSGETLKQLCLSGNGI 236 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 L DYM+ + + + LV P + + A + + + Sbjct: 237 ACLSDYMIDKEIARGELVELMADKVLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEH 292 >UniRef50_Q1N119 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N119_9GAMM Length = 311 Score = 254 bits (649), Expect = 3e-66, Method: Composition-based stats. Identities = 50/299 (16%), Positives = 107/299 (35%), Gaps = 9/299 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F + F GSF+ AA+ LGL S +S I ++E L V L R+TR++ LT++ Sbjct: 4 FDLNEIAIFVKVVDAGSFTGAAKSLGLPKSTVSRKITQLEERLGVRLLQRTTRTLSLTDT 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G ++ + + ++ D + + + +RI +L+ + + ++ ++ P Sbjct: 64 GSAYYNQCSRIIGDVEEANIAVTEMQSKPKGLLRITAP-MLFGSRVLSDMVSEFLQKNPE 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + + + D I ++A L + +G I+ +P++ + Sbjct: 123 IQVEM--MLTDQQLDLIQEG-IDVAFRV--GHLADSSLIARPLGEIKTIVCASPEY-IKK 176 Query: 185 VPEPIAESQLRLYPNIMVED-TAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P S+L + + + + + V D + I G GI Sbjct: 177 HGSPNHPSELINHSTLGWSPKGNWEFDSPEQFSAEINPRVRVNDILSMRMLAINGVGIAR 236 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAPNGILTGI 301 LP ++ E + + L + L + + + Sbjct: 237 LPTFLCAEDINEGRLNPVLCDWSYSGVPIHALYASNRHLSVKVRTFVDFIVDGLRQSQP 295 >UniRef50_A8U3M8 Transcriptional regulator n=2 Tax=Bacteria RepID=A8U3M8_9PROT Length = 313 Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 104/306 (33%), Gaps = 14/306 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F S + AA + L+ S +S + +E L V L R+TR + LTE Sbjct: 1 MDVLTGMTIFVAVVENSSLAGAARHMNLSPSVVSKQLSALEDRLGVRLLNRTTRRVSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G ++ ++ +L D + + T ++I + +H A L + P Sbjct: 61 VGSAYYERSKRILADVDEAEAAVSTAHSSPRGLLKITAP-STFAHRHVAPHLPGFMDRNP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + ++ ++AI L + ++ APD+ LA Sbjct: 120 EVQVQMLVA---DRLVDLVEEGVDLAIRIAQ--LKDSSLIARKLAPNHRKLVAAPDY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTA-----HTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P ++ + I ++ + H + ++ + +I ++ + G Sbjct: 174 KWGTPARPEEITDHALISLQPGSPINDWHFVVDGEETVIRARGAIATNHGDSILALALSG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPNGI 297 G+ L ++V E + L++ + R+D + + Sbjct: 234 AGLAMLAAHVVGEHIKAGRLISVLDEHVREDVPIYAVYPSNRHLSPKVRAFVDYLVEM-Y 292 Query: 298 LTGIYQ 303 Y Sbjct: 293 GPRPYW 298 >UniRef50_Q2SQE2 Transcriptional regulator n=5 Tax=Gammaproteobacteria RepID=Q2SQE2_HAHCH Length = 298 Score = 253 bits (648), Expect = 5e-66, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 114/293 (38%), Gaps = 9/293 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E G F++AAE + + S + + + ++E L V + R LTE+G Sbjct: 5 TLEQWRMLHAVVAHGGFAQAAEVVHKSQSTVHHAVHKLEEMLGVQILQVQGRKATLTEAG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + R++ +LL ++ ++QGIEA ++I + +++Y + L +Q+P Sbjct: 65 KLLLRRSENLLQQAEQLESVASGLAQGIEAHIQIAV-EIIYPQEALYCALAEFSEQYPNT 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + V +G D + ++ I T G I I + P+HPL + Sbjct: 124 RIEIIETVLSGAEDLLKQGVCDLVI----TPFVPQGFIGDLITNIPFTPVANPEHPLHQL 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + + L + I++ D+ + L ++ V +T G G +LP Sbjct: 180 NRTLNKEDLARHRQIVIRDSGAVR--RNSGWLGAEQRWTVTHMSTSVNMVKRGLGFTWLP 237 Query: 246 DYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 V + L + R+ L+ G T ++ Q G Sbjct: 238 VSWVDADIQSGALKALPLQEGGDREVPLYLVYGDMDRQGPATLYLGNQLLRRG 290 >UniRef50_A4BIQ6 Transcriptional regulator, LysR family protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BIQ6_9GAMM Length = 301 Score = 253 bits (647), Expect = 7e-66, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 118/298 (39%), Gaps = 16/298 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++L+ FTT + +F+ AA +LGLT SA+S I +E L V L R+TRS+ TE Sbjct: 1 MARLDSLIIFTTVVKANNFTNAAHQLGLTPSAVSKQISLLEDRLGVRLLNRTTRSVSPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ FF + + LL D + + + ++I + ++ +Q+P Sbjct: 61 AGQLFFNRCSRLLEDLEEAEHMVKDLETSPRGTLKISATPT-FGRAMLMKIFAQFLEQYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +T + D + ++AI L + + + + ++ LA Sbjct: 120 DVNFDLTLA--DKGLDLVREG-IDLAIHL--GSLQDSRLVARPVARQKVILVGSKEY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMV-------EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 +P A ++L + I++ E K L + V D +T C+ + Sbjct: 174 EHGQPEALNELVNH-FILMVSGIDFAEPRWIKRFIKEAGLSNKDRRFTVNDLDTLCEAAL 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFA 293 G G+ LP YM+RE + LV + + + ++ A Sbjct: 233 NGMGLAALPVYMIREHLDSGKLVHILPDIHFPVRTIHVVYPENRYLSAKSRAFVDFMA 290 >UniRef50_C9QE28 Transcriptional regulator n=3 Tax=Vibrionaceae RepID=C9QE28_VIBOR Length = 315 Score = 252 bits (646), Expect = 8e-66, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 9/294 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E + F A SF+ AA +L + + IS + +E L V LF R+TR + LTE Sbjct: 27 MANWEGVSEFVGVAETQSFTAAANKLDTSVAQISRRVSALEERLAVKLFNRTTRKVSLTE 86 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++++ L+ + + + + +++ + Y +H A LL + +P Sbjct: 87 AGQLYYQQCKHLVEGLELAELAVTQMQSTPKGLLKVTAP-VTYGEQHLAPLLHQFLELYP 145 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + N D +I ++AI L + + + + +PD+ L Sbjct: 146 QVNLDL--MLTNQKLD-LIELGVDVAIRLGR--LQDSSLIAKRLSSRQLYVCASPDY-LD 199 Query: 184 FVPEPIAESQLRLYPNIMVE-DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 EP S+L + ++ + + K + I G G+ Sbjct: 200 RFGEPHTLSELSNHQCLVGSVEYWRFRDTKGEKSMRVSGRIHCNSGYALLDAAKRGLGLA 259 Query: 243 FLPDYMVREAMTQSLLVTRQIHNP-RQDSRMLLATQHSATGQVTQWIKKQFAPN 295 LPD+ V+EA+ LV ++ L Q+ + + A Sbjct: 260 QLPDHYVQEALDTGELVEVLTEYRDEREGIWALYPQNRNLSPKVRLLIDFLAEK 313 >UniRef50_A1RHL4 Transcriptional regulator, LysR family n=21 Tax=Shewanella RepID=A1RHL4_SHESW Length = 337 Score = 252 bits (646), Expect = 9e-66, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 113/304 (37%), Gaps = 16/304 (5%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + FT AR GSFS AA LG++ S +S + +E L V L R+TRS+ LTE+G + Sbjct: 32 IAIFTHVARAGSFSAAARRLGISKSKVSTQVADLEHRLGVQLIQRTTRSLSLTEAGHLLY 91 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + +LL D + ++ +++ I+Q L + P ++ V Sbjct: 92 LQGEELLRDAEQAIASVHNLNDATRGVLKVGISQSFGAMHIIP-ALPSFMAKHPELELQV 150 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + +++ ++ + + L G+ + ++ +PD+ +A EP Sbjct: 151 S---LLDHKVDVVSEGLDLLLTMSEQLPL--GMVARPLMKCQFLLVASPDY-VAKHGEPT 204 Query: 190 AESQLRLYPNIMVEDTAHTINKK------VGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 QL + ++ + H + + + V + I G G+ + Sbjct: 205 RPEQLVDHNCLVYQGEWHEHSMWQFKKGDDYCEIGVSGNFRVDNAPALKSAAISGLGVVY 264 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQD--SRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 L Y++ + +T+ LV + + + + I Sbjct: 265 LASYLMEDEITKGTLVPLLKDWQLTHHLPLQAVYPRRKHLAPKVSAFIEFIKDH-IGNPP 323 Query: 302 YQDL 305 Y D+ Sbjct: 324 YWDI 327 >UniRef50_C8SVH9 Transcriptional regulator, LysR family n=2 Tax=Mesorhizobium RepID=C8SVH9_9RHIZ Length = 317 Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats. Identities = 79/298 (26%), Positives = 129/298 (43%), Gaps = 8/298 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSI 59 M T + L A GSFS A +L S ISY I +E L + LF R TR Sbjct: 1 MQPNPTLDQLQILVAVADTGSFSAAGRKLNRAQSVISYGIANLEAQLGLKLFEREGTREP 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LTE GR A ++ ++ R D G+EA V + ++ L + R+L+ + Sbjct: 61 QLTEIGRAMLEDARRMIGVLQRMRSRADGHHHGLEAEVALSVDASLPSS-VLVRVLKAFE 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 QFPT + + + D +++ QA++ IG LL + IG + A AP Sbjct: 120 MQFPTVMLRLHIGTLGLIPDHVVSGQADLGIG---GLLGDVDVHLVRIGFMSIVLAAAPS 176 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA +P+P+A +R + ++V D + K + + + + D TK G Sbjct: 177 HPLALLPKPLALEDVREHTQLVVTDQSE-RTKGRDFGVFAYRTWRLTDMRTKHMLMREGL 235 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATG--QVTQWIKKQFAPN 295 G G LP +++ + + LV + + L A + T W+ ++F Sbjct: 236 GWGGLPRWLISDDLASGRLVEIDLEPFSEVRSPLFAMHRNDTSPKPAAAWLIERFKRG 293 >UniRef50_A6UK87 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=A6UK87_SINMW Length = 306 Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 113/307 (36%), Gaps = 12/307 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + + F A GSF AA L SA+S+ + +E L V LF RS Sbjct: 1 MLDALTLDQMRIFVAIAEAGSFRAAASRLSRVQSAVSHAVANLEAELGVSLFDRSGHRPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR A +L ++ R + +G+E + I ++ + P L+ + + Sbjct: 61 LTPAGRSLLSDARAILLKTDTMRARARGLGEGVELGLTIALDPQ-FPPVLACAALKEMHR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P+ I V T A+ + +AI D L I+ + ++ A +A H Sbjct: 120 AYPSVAIRVLTASLGEAVHALRERRCALAISGID--LPDPHIERRALALVQRAAVVAASH 177 Query: 181 P---LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P LA P+ + L + ++ ED + + +L + V D TK + Sbjct: 178 PLGILAAAGGPVTATDLADHVQVVAEDPSPLTQGRDFNVL-SPGTWRVGDNVTKHALILA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSR-----MLLATQHSATGQVTQWIKKQF 292 G G G LP ++V + + +V L+ G + Sbjct: 237 GIGWGNLPLWLVERDLAEGRVVRVPAAEFGPKGETMANAYLMHRSDEHLGPAARAFCDAL 296 Query: 293 APNGILT 299 Sbjct: 297 LRMAGHR 303 >UniRef50_Q1QPF6 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=Q1QPF6_NITHX Length = 309 Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats. Identities = 67/298 (22%), Positives = 120/298 (40%), Gaps = 7/298 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + L F AA GSFS AA + T SA+S I +ET L VVLF R+ R + Sbjct: 1 MLESVSFDQLRMFVAAADEGSFSAAARRVRRTQSAVSEAILSLETQLGVVLFDRAGRYPK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G A +++ A+K R I+ G+EA + + + + A + + Sbjct: 61 LTTDGVVLLADARAVISGVDAMKARAKGIAGGLEAELT-AVLDVFLPIEVIAEAAREFRI 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 QFP + + E G +++ +A+I + L G+ + ++ A H Sbjct: 120 QFPATPLRIYVEALGGAVQPVLDGRASIGVVGSLPTLP-PGLIKERLFDVKLMMVAAASH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA I + +L + +++ D + + ++ + + D K I G G Sbjct: 179 PLASYRGTIPKEELARHVQLVLTDRSTLTEGRTIGVM-SPSTWHLADLFAKHAFLISGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPR----QDSRMLLATQHSATGQVTQWIKKQFAP 294 G +P + V + + LV I + + G +W+ ++ Sbjct: 238 FGGMPLHTVARDIAKGRLVELSIEEAPPGGLPLPMFAVYREGEPPGPAGRWMIERLKN 295 >UniRef50_B8J293 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8J293_DESDA Length = 308 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 52/311 (16%), Positives = 107/311 (34%), Gaps = 12/311 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L F A G+F++AA +L LT A+S ++ +E L V LF RS R + LT Sbjct: 1 MNIDHLKTFHKIAETGNFTQAARDLFLTQPAVSMQVQSLENSLGVPLFDRSRRKVNLTSE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + + + ++ ++SQ R+ + + ++ + + + ++ P Sbjct: 61 GRVLYEYTQRIFSLVNQMQDEFQSLSQLDTGRLVLGASAIMSA-YYLPGYMVLFHQRHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + + + + + I + + + LA Sbjct: 120 VTLDLAVHNSHVIAEKVYRGELEIGFCG--SSPSHPNLRAHFLHREPLIVVAGRKSALAQ 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES------ILVPDFNTKCQCQILG 238 P+ L +P I+ E NK W + V + Q I G Sbjct: 178 KDGPVCADDLLAHPFILREQGTRVTNKVQEWFKTHAGRPERPSFMTVDNMEVAKQLVING 237 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAPNGI 297 G+ LP Y + L ++ + L + + G+ Sbjct: 238 LGVTALPRYAAALELAAGQLTQLRLESFDLHVNYSLVYMEGQRLSRTVTHFLALLFELGV 297 Query: 298 LTGIYQDLLHR 308 + +++L R Sbjct: 298 --PLPEEILSR 306 >UniRef50_B8G0Z2 Transcriptional regulator, LysR family n=4 Tax=Firmicutes RepID=B8G0Z2_DESHD Length = 303 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 112/295 (37%), Gaps = 11/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E L F A SFSKAAE+L L+ A+S I+ +E L RS++ ++LT + Sbjct: 1 MIIETLEIFRKVAEEKSFSKAAEDLFLSQPAVSSHIRNLENEFGTKLIYRSSKHVDLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + +A ++N + K +I+ I + +RI + + L+ +++P Sbjct: 61 GEILYEQACRIINQYQEAKEKINQIQSIVSGNLRIGASFTI-GEYILPELVSQTARRYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I VT + + N+ ++A+ + + G P HPLA Sbjct: 120 LNINVTIGNTEEIAQGLRQNRLDVALV--EGKITGKEFILEPFMVDEMVLIALPSHPLAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + + L I+ E + T ++ + + S + G G Sbjct: 178 IKG-VTAQDLEDQVWILRETGSGTREFSDRFIETLKIPVKHSYGFSSNTGVKAAVLSGLG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLAT-QHSATGQVTQWIKKQF 292 I + ++++ + + + PR L+A Q + + ++ + Sbjct: 237 IALVSKLIIQKEIKAGEIAIIPLEENLPRLSREFLIARGQQTYFTKASEAFLMEL 291 >UniRef50_A8G163 Carbonate dehydratase n=14 Tax=Gammaproteobacteria RepID=A8G163_SHESH Length = 289 Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 116/294 (39%), Gaps = 9/294 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F E + F A SF+KAA+ LG++T+ +S + +ET + LF R+TR + +TE Sbjct: 1 MFNWEGVSEFVAVAEAESFTKAAKRLGISTAQVSRQVSALETRMATKLFHRTTRKVSVTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR +++ +L+ +R I + ++I + Y + A L+ ++P Sbjct: 61 VGRIYYQHCRQVLDGLEEAERAITNLQSTPRGLLKITAP-VTYGERTLAPLVNDFIAKYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V+ +I+ ++AI L+ + +G+ +P + ++ Sbjct: 120 ELEVKVS---LTNQKVDLIDEGYDLAIRL--GQLEDSSMMAKRLGSRTQYVCASPGY-VS 173 Query: 184 FVPEPIAESQLRLYPNIMVE-DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 P + S+L + ++ D + + ++ + I G GI Sbjct: 174 TFGIPHSLSELEQHNCLLGTLDYWRFQENGKTRNVRVKGNLSCNSGHALVDAAIKGIGII 233 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQ-DSRMLLATQHSATGQVTQWIKKQFAPN 295 LPDY V + L+ N + + L + + + + Sbjct: 234 QLPDYYVLPYLEDGQLIPLLEQNRQPDEGIWALYPHNRHLSPKVRMLLDYLSEA 287 >UniRef50_A1TRK9 Transcriptional regulator, LysR family n=9 Tax=Comamonadaceae RepID=A1TRK9_ACIAC Length = 315 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 87/305 (28%), Positives = 150/305 (49%), Gaps = 5/305 (1%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T ++L A GSF+ AA +LG+ SA++Y ++++E LDV+LF RS R T Sbjct: 9 DALTPDSLAMLQVIAETGSFAAAARQLGVVPSALTYRVRQIEEALDVLLFDRSARQARPT 68 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E+G R+ LL + A+ R+ ++ G E ++ I ++ ++ L++ Q Sbjct: 69 EAGSELLREGARLLEEVEAVAHRVRRVATGWEPQLTIAVDGVISPTTLL-ELVEAFYAQS 127 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + ++ G +A+ + +A++A+G + G+ IG + + F +AP HPL Sbjct: 128 PPTRLKLRDDILTGTLEALTSGRADLALGVAVNATNASGVQGKVIGDLLFLFTVAPHHPL 187 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A P P+ ++ LR + I V D+A LL GQ+ V TK Q Q+ G G G Sbjct: 188 ATAPGPLTDTVLRQHRAIAVADSAQHGG-VTMGLLGGQDVFTVDSMQTKLQAQLRGLGAG 246 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT---QHSATGQVTQWIKKQFAPNGILT 299 FLP+ MVR + LV R++ P + R+ A H+ G+ W +Q Sbjct: 247 FLPEPMVRPYVEAGRLVVREVARPARRVRLHYAWGGPGHAPPGRALAWWLQQLESPATRA 306 Query: 300 GIYQD 304 + ++ Sbjct: 307 ALLEN 311 >UniRef50_B9JB94 Transcriptional regulator protein n=3 Tax=Proteobacteria RepID=B9JB94_AGRRK Length = 307 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 106/300 (35%), Gaps = 16/300 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L AF +A GSF+ A LGL+ SA+ + +E L V L RSTRSI LTE Sbjct: 1 MDRLSGLNAFVRSADLGSFAAAGRVLGLSASAVGKAVTNLERQLGVRLMQRSTRSIRLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR F + +L+D + + R+R+ + + Y +L ++P Sbjct: 61 EGRLFHERCRRVLDDLEDAQASLAQAVAVPRGRLRVSVPIVSY--HFLLPVLPEFVVRYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + +N +I ++AI + D L + + + AP + L Sbjct: 119 EVELDI---DFNDRIVDMIEEGVDVAIRSGD--LPDSRLMSRTLRPFQMLLCAAPAY-LE 172 Query: 184 FVPEPIAESQLRLYPNIMVEDT-------AHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 P L + I G LH + ++ + I Sbjct: 173 RHGVPDCPRALDDHLAIRFRFPNSGKLQNWPLTLPDGGPELHMKTALSCNNMEALRGAVI 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPN 295 G GIG +PD++ R + + L T + L + + Sbjct: 233 SGLGIGCMPDFLARSPLAEGKLRTVLDDHIDGPGHFHLLWPSNRHLSPKVRVFVDFLSER 292 >UniRef50_A5D2L1 Transcriptional regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D2L1_PELTS Length = 303 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 58/304 (19%), Positives = 114/304 (37%), Gaps = 12/304 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L AF A SF+KAA +L ++ A+S+ IK +E L V LF R + + LTE+ Sbjct: 1 MNLKQLEAFLLVAELQSFTKAARQLYMSQPAVSFQIKALEEDLQVALFQRGDKKVILTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +A +L + IK +D + + + + + + L+ K+++P Sbjct: 61 GRLLYPEAKQMLKHYQKIKVGLDDLRDLKKGHLVVGAS-TIPGEYLLPLLIGKFKEKYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +IT+ V + + ++ I ++G ++ + + P H A Sbjct: 120 IKITLKVSGSGQVGQWVREREIDLGI--TGAFIEGESLECRPWIDDQLVLIVNPSHRWAS 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 + + S+L+ P IM E + T L + + + Sbjct: 178 LGA-VQASELKNEPMIMREHDSGTRRTIEKKLKECNLSLEKIPQGMELGSTRAVITAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQFAPNG 296 G G+ + Y REA+ + Q+ + + G + + Sbjct: 237 GLGVSIVSRYAAREALELGRVKEVQVTGLNMNRSLYQVRHKQGIEGFAIRAFTEFINDRN 296 Query: 297 ILTG 300 +L Sbjct: 297 VLER 300 >UniRef50_Q2RS38 Transcriptional regulator, LysR family n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RS38_RHORT Length = 304 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 50/311 (16%), Positives = 108/311 (34%), Gaps = 18/311 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + GSFS+A LG+ S++S + +E L L R+TR + LTE Sbjct: 1 MDILSGMRLLSRVVEAGSFSEAGRLLGMAPSSVSRQVSALEDTLGTQLLNRTTRRLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F +A +L D R + ++ +++ + + + H A L + ++P Sbjct: 61 AGGLFHDRALRILADVEDATRVVSSLESAPRGTLKLNVP-VGFGNYHVAPALPLFLARYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +T + + +I ++A+ L + + R +PD+ L Sbjct: 120 DLTVDLT---LSDHFIDLIEEGVDVAVRI--GALRDSSLVARRLADNRRMVYGSPDY-LR 173 Query: 184 FVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 + P L + I + + + + + + + G Sbjct: 174 RMGTPETPHDLTAHRCIAYRYRPGPQGWLFERDGIRLDITVTGPLTANNSESLHKMILGG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-----LLATQHSATGQVTQWIKKQFA 293 G+ LP +M + LLV + + ++ + + A Sbjct: 234 SGLAMLPTWMAYSDVKSGLLVPLLGDWTMSPTSLESAIHVVYPESRHLSAKVRAFIDFMA 293 Query: 294 PNGILTGIYQD 304 + I Y + Sbjct: 294 DH-IGKPPYWE 303 >UniRef50_A8ZMF1 Transcriptional regulator, LysR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=A8ZMF1_ACAM1 Length = 311 Score = 250 bits (640), Expect = 4e-65, Method: Composition-based stats. Identities = 59/313 (18%), Positives = 115/313 (36%), Gaps = 14/313 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + N+ F A SF++A+ LGL+TSA+S + R+E L V LF R+TRS+ LT Sbjct: 1 MKSLSNIKTFVRVAEVESFARASNILGLSTSAVSKAVARLEADLGVKLFHRTTRSVSLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F+ LL +F A+ + ++ I + LLQ + +P Sbjct: 61 DGKQFYEGCQQLLLEFDALTAEVQGSRATPRGQLTISAP-AAFGRLCLVPLLQSFMQSYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ + + +I I L D + + + R +P H LA Sbjct: 120 EITLNISI---DDHAIDLAAQGIDIVIR-TGQLADSANLIASRLVTYRLVVCASP-HYLA 174 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTKCQCQI 236 EP QL+ + + + + G ++ + + + I Sbjct: 175 EHGEPQHPEQLQRHSCLNFRNPDTGRFFPWVLEIDGAVESYTVSGPLVFDNADAVVRSSI 234 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFAPN 295 G+ +P ++ +EA+++ LV ++ + + + + Sbjct: 235 SSLGLSQMPSFLAKEAVSRGQLVEVLNSYQPPETPVWICYLDRNFVSPRIRAFVEFMKSE 294 Query: 296 GILTGIYQDLLHR 308 L R Sbjct: 295 KSHLSTMCSLAER 307 >UniRef50_Q4KCL2 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCL2_PSEF5 Length = 302 Score = 250 bits (639), Expect = 5e-65, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 107/300 (35%), Gaps = 16/300 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F + + GS A E LGL+ SA+ + R+E L V L RSTR I LT+ Sbjct: 1 MDNLNGLQVFVSVVQSGSLVGAGERLGLSASAVGKALARLEQRLGVRLLNRSTRRISLTD 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F+ + ++ + + + IS R+R+ + + + +L ++P Sbjct: 61 EGALFYERGQRIVAEVQEAEAELARISDKPRGRLRVSLPAI--GYRMLLPILPEFSARYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + +N +I + I + + L + +G + AP + A Sbjct: 119 DIELDL---DFNDRLIDVIAEGVDAVIRSGE--LPDSQLKSRNLGPFGFVLVGAPGY-FA 172 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQI 236 P L + + + ++ ++ L ++ + + Sbjct: 173 RRGTPRTPRDLEQHACLRYKFPGGSLLQQWSLRLPDGAPPLVLGSALTSNNLESLIHAST 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 G GI ++P+++V A+ LV ++ + + + Sbjct: 233 QGLGIAYVPEFVVCGALADGSLVAVLDDYQQERGKFSILWPSSRHLLPKLRVFVDFLGER 292 >UniRef50_D2TI95 LysR-family transcriptional regulator n=53 Tax=Proteobacteria RepID=D2TI95_CITRO Length = 305 Score = 250 bits (639), Expect = 6e-65, Method: Composition-based stats. Identities = 63/296 (21%), Positives = 114/296 (38%), Gaps = 13/296 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E L F + GSFS+AAE+LG SA+S +K++E L V L R+TR + LTE G Sbjct: 4 TSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMKLGVSLLNRTTRQLSLTEEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +FR+ +L + A + I +RI + L++ ++++P Sbjct: 64 ERYFRRVQSVLQEMAAAETEIMETRTTPRGLLRIDAATPVVL-HFLMPLIKPFRERYPDI 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +++ V + + +I + ++AI A L + + +P++ +A Sbjct: 123 TLSL---VSSETFINLIERKVDVAIRA--GKLTDSSLRARPLFTSYRKIIASPEY-IARF 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKK----VGWLLHGQESILVPDFNTKCQCQILGEGI 241 P L+ + + + G L + I T Q + G GI Sbjct: 177 GRPETVEDLKQHLCLGFSEPVSLNTWPVACCDGQLHEIECGISSNSGETLKQLCLTGNGI 236 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 L DYM+ + + LV P + + A + + + Sbjct: 237 ACLSDYMIDREIARGELVELMADKRLPVEMPFSAVYYSDRAVSTRIRAFIDFLSEH 292 >UniRef50_B8CJ29 Transcriptional regulator, putative n=4 Tax=Gammaproteobacteria RepID=B8CJ29_SHEPW Length = 292 Score = 249 bits (638), Expect = 7e-65, Method: Composition-based stats. Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 9/291 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E L F A GSFS A LG SA+S I +E L+ LF RS+R LT Sbjct: 1 MYNLEQLRMFVETAESGSFSACARRLGKVQSAVSQGIANLEIELNTNLFDRSSRKPSLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G A +L Y + + ++ E +++ I+ L AR+L + FP Sbjct: 61 HGERLLPFAQAILRQTYELDSVTNALNLFHETEIKLAIDDAL--LPMMARILDSFAEHFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + V + +A++ + + +D +G + + ++P HPLA Sbjct: 119 GTNLELYAVATPDVLSLVDGGKADLGLMFASSEFPQK-VDVCYVGNMPFNGVVSPAHPLA 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + L + +++ + + FN G G G+ Sbjct: 178 EL-NMVTVADLIPHRQLLIR--SLDGQALAHSPIVSSHIWWGNSFNAINALVKQGLGWGY 234 Query: 244 LPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQ 291 +P YM + Q +V Q+ H P + + + G W+ Sbjct: 235 VPSYMAEQYERQGEMVCLQLSFDHKPWRVPIDRVMAKQKTKGPALTWLADA 285 >UniRef50_A4XWR7 Transcriptional regulator, LysR family n=57 Tax=Proteobacteria RepID=A4XWR7_PSEMY Length = 304 Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats. Identities = 64/290 (22%), Positives = 108/290 (37%), Gaps = 9/290 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 E L F A G FS AAE LGL+TS +S + R+E L LF RSTR + LTE+G+ Sbjct: 5 EGLDEFVAVAECGQFSAAAERLGLSTSQVSRQVARLEERLQSRLFYRSTRRVALTEAGQL 64 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 F + L + R + + + +R+ + Y + L+ + P ++ Sbjct: 65 FLQHCQRLQDAREEALRAVGDLGAEPKGLLRMTC-AVAYGERFIVPLVNDFMARHPQLRV 123 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + E+ N D + ++AI L + + AP++ L Sbjct: 124 EI--ELSNRQLDLLHEG-LDLAIRLGR--LQDSRLMAARLAPREMYLCAAPEY-LQRYGR 177 Query: 188 PIAESQLRLYPN-IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPD 246 P + S+L + I D ++ + Q + + G G+ LPD Sbjct: 178 PHSLSELARHNCLIGSSDHWSFVDNGRETQMRVQGNWRCNSGQAVLDAALRGFGLCQLPD 237 Query: 247 YMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 Y V E + LV+ + P + L Q + + Sbjct: 238 YYVLEHLASGALVSLLQQHRPPNTAVWALYPQQRHLSPKVRQLVDHLKAG 287 >UniRef50_A1WVW1 Transcriptional regulator, LysR family n=11 Tax=Proteobacteria RepID=A1WVW1_HALHL Length = 318 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 61/301 (20%), Positives = 111/301 (36%), Gaps = 12/301 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN T L F + AR SF++AAEEL LT A+S IK++E + + LF + + I Sbjct: 1 MN--ITLRQLQVFESVARHLSFTRAAEELYLTQPAVSMQIKQLEQQVGLPLFEQIGKRIY 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G R A + + + ++ + R+R+ + LL + Sbjct: 59 LTEAGEEVRRYAQRISAELRELADGLEALRGLNSGRLRLTVAST--ANYFATDLLAAFTR 116 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + P + GV I +N+ ++A+ +G + APDH Sbjct: 117 RQPGVTFQLEVTNREGVIRRIQDNEMDLAVMGRP--PEGLDVAAEAFMPNPLVIIAAPDH 174 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQI 236 PLA PI +L+ ++ E + T ++ + + + Q Sbjct: 175 PLAD-GSPIPLERLQDELFVLREQGSGTRNAVQRVLEERGMNLRGGLEMSSNEAIKQSVQ 233 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G G+G + + V + L + P + L+ + ++ Sbjct: 234 AGLGLGVVSIHTVALELELGRLRVLNVEGFPLERQWYLVHRSGKRLSPAAEAFRQFILDE 293 Query: 296 G 296 Sbjct: 294 A 294 >UniRef50_B5JTX4 Transcriptional regulator, LysR family n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JTX4_9GAMM Length = 302 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 60/293 (20%), Positives = 119/293 (40%), Gaps = 8/293 (2%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E F G F++AAE L + S +SY + ++++ L + + T S R L Sbjct: 7 HPRITLEQWRCFVAVIDCGGFAQAAEALNKSQSTVSYAVNKLKSVLGLEVLTMSGRRAVL 66 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE+G+ +R A LL + A++ + + E + + I++ L+ + Q Sbjct: 67 TEAGQVMYRGARQLLEESVALEGLVKPLQSEWETSLTLVIDEAFPLDVVL-SALKAFEPQ 125 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ + +G +A+ A++ + G +I + + HP Sbjct: 126 SRGTRVHYHEAILSGSEEALDAGTADLVVAYR----VPPGYSGDQIYSAEFVAVTGASHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA +P+ L+ + +I++ D+ GW L Q+ V T + + G G Sbjct: 182 LAGSEKPLQSRALQKHTHIVIRDSGRYKQTDTGW-LRSQQRWTVSSIQTAVKTVLSGVGF 240 Query: 242 GFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQF 292 +LP + V E + + LV + R+ L+ G T+ + + Sbjct: 241 AWLPLHAVSEYLNKGELVRLNLEQGATRRGDLYLVYGHSDYVGPATKTLAQSL 293 >UniRef50_B9KYF2 RuBisCO operon transcriptional regulator n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9KYF2_THERP Length = 299 Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 55/300 (18%), Positives = 106/300 (35%), Gaps = 9/300 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + L F + AR SFS+AAE+L ++ A+S IK +E L V LF R+ R +ELTE+G Sbjct: 4 SLRQLQVFRSVARHRSFSRAAEDLVISQPAVSAQIKSLEQVLGVPLFQRTGRGVELTEAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R A LLN + + +VR+ + + L + +P Sbjct: 64 RQLLPYAERLLNLLDEALAAVHELRCAQRGQVRVAASTTA-GIYVVPKALGAFHRAYPGV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++++ V ++ A++AI + D ++ + +P H LA Sbjct: 123 ELSLDVLNRFAVHQRLLAGDADVAIMG--LIEDPQDLEIEQFLPNELVVIASPRHHLARR 180 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKV----GWLLHGQESILVPDFNTKCQCQILGEGI 241 + I ++ P ++ E + T L + ++ + Q G+ Sbjct: 181 HQ-IPLDEIAREPFLVREIGSGTRADMERIFAEAGLSPRVAMELRSNGAIKQAVAADLGV 239 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPNGILTG 300 +P + + L+ + L + + + Sbjct: 240 AVMPRDAIGLELETGRLIVLDVQGFPVRRWWSLVRRAGRQPSAAADALWNFLLQYRLQAR 299 >UniRef50_A4VMY3 Transcriptional regulator, LysR family n=26 Tax=Gammaproteobacteria RepID=A4VMY3_PSEU5 Length = 435 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 65/293 (22%), Positives = 117/293 (39%), Gaps = 8/293 (2%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T + G F++AAE L + S++SYT+ RM+ L V L R LT Sbjct: 137 PRVTLDQWRTLQAVIDHGGFAQAAEALHRSQSSVSYTVARMQEQLGVPLLRIDGRKAVLT 196 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E+G R++ L+ ++ + QG EA VR+ ++ + K R L + Sbjct: 197 EAGEVLLRRSRQLVTQASQLEELAHHMEQGWEAEVRLVVDAAYPSAKLI-RALSDFMPKS 255 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 C++ + EV +GV + + + A++AI LD G +E+ + + DH L Sbjct: 256 RGCRVRLREEVLSGVEEVLKDGTADLAISG----LDITGYLGSELSTVEFVAVAHADHAL 311 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 + ++ L+ I+V DT + GW L ++ V T G G Sbjct: 312 HQLGRKLSVQDLQSQMQIVVRDTGLRQPRDAGW-LGAEQRWTVGSLATSVAFVSSGLGFA 370 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT--QHSATGQVTQWIKKQFA 293 +LP +++ + + LL + + G T+ + + Sbjct: 371 WLPRHLIGRELAEGLLKPLPLVQGSIRRPLFYLYTNHDKPLGPATRILIELIK 423 >UniRef50_A3QF96 Transcriptional regulator, LysR family n=10 Tax=Gammaproteobacteria RepID=A3QF96_SHELP Length = 304 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 118/305 (38%), Gaps = 13/305 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + + AFT + GSF+KAA+ LGL++ +S + ++E L V L R+TR + +TE+GR Sbjct: 6 IDTMKAFTAVVQEGSFTKAADRLGLSSQLVSKYVSQLEEHLKVRLLNRTTRRVNVTEAGR 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 +F + +L D + + +S+ +++ + + H L ++Q P + Sbjct: 66 AYFERCQQVLIDIEEMDNALTNLSETASGLLKVSAP-MSFGIHHLPSALVQFQQQHPDVR 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + +T ++ + ++A+ L + ++ I+ +P++ LA Sbjct: 125 LDIT---LTDKKVDLLEDGVDVALRI--GQLTSSSLIAKKLTPIKLVVCASPEY-LAERG 178 Query: 187 EPIAESQLRLYPNIMVEDT----AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 EP + L + + + A + L + + + + I G GI Sbjct: 179 EPKTPADLIHHNYLHFSYSDLGAAFGRFGEHFSALKIPSDLACNNGDMLVEAAIAGRGIV 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 P ++V +A+ L P + + + T Sbjct: 239 VQPTFLVSKALRSGKLKAILTDYTPEPFGLYAVYVHRKFLASKVRCFVDALSQYYGKT-P 297 Query: 302 YQDLL 306 Y D L Sbjct: 298 YWDAL 302 >UniRef50_Q0K871 Transcriptional regulator, LysR-family n=5 Tax=Proteobacteria RepID=Q0K871_RALEH Length = 305 Score = 247 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 120/300 (40%), Gaps = 12/300 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 F+ + L F GSFS AA LG T S +S + +E L V LF RS+R+ LT Sbjct: 2 RFSLDQLQVFALVVETGSFSAAARRLGKTQSTVSAAVANLEIDLGVPLFDRSSRNPALTG 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR +A +L +++ +++ + + I +L +++FP Sbjct: 62 AGRKLLTEAEAVLERCRSLQAHAASLADANPPGLTLAIE---IPYHAVMPVLAEFEREFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +T+ VY V + ++ +A + I + + ++G + + P HPLA Sbjct: 119 YVDLTIRNPVYGDVSELVLQGEAELGIAFAQPHYA-PELAFVQLGKLIMVHVVHPGHPLA 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 E ++ + L Y + +AH L + + G G Sbjct: 178 GR-EQVSFADLHAYRRLAF--SAHADKLPTSEYLRAARVWRAESYLALVEMVKSGLGWAT 234 Query: 244 LPDYMVREAMTQSLLVTRQIH-----NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 LP +VR A+ + LV + + ++ A G+ QW++++F N + Sbjct: 235 LPRQLVRAALERGELVELDLAAYPYTDWLVSVDLIWAKSGRPQGRAEQWLRQRFRENMVF 294 >UniRef50_Q21IY2 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q21IY2_SACD2 Length = 299 Score = 247 bits (632), Expect = 3e-64, Method: Composition-based stats. Identities = 61/306 (19%), Positives = 116/306 (37%), Gaps = 13/306 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + L AF A SFS AA+ L +T A+S I +E L+ +LF R R + Sbjct: 1 MITSMDTDGLKAFLAVAEHHSFSVAAQHLFITQPAVSKRIAALEQELNHILFDRLGRDVA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +A +LN + +R I S I +R+ + + H +L+ Sbjct: 61 LTEAGQALLPRAQAILNSMHEAQRTIREFSGEIVGTLRVATSHHI-GLHHLPPILREFAA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + + ++ ++A+ L+ ++ + + F + +H Sbjct: 120 NHKQVNLQFDFLDSEQAHEKVLRGDCDLAVVTLAPTLE-ENLEASVLWPDPLCFIVGANH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQI 236 PLA I+ +L P I+ + +T + L ++ T Sbjct: 179 PLATSKN-ISLEELSRTPAILPDLNTYTGRLVKHFFDTQGLALNLNMATNYLETIKMMVT 237 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPN 295 +G G LP MV L I N + + ++ ++ + G + + + N Sbjct: 238 VGLGWSVLPKTMVDS-----SLKILPIKNIQLERQLGVVIHKKRTLGNAARAFFEVLSAN 292 Query: 296 GILTGI 301 + I Sbjct: 293 SQIKQI 298 >UniRef50_D0I8K6 Transcriptional regulator LysR family n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I8K6_VIBHO Length = 312 Score = 247 bits (631), Expect = 4e-64, Method: Composition-based stats. Identities = 58/300 (19%), Positives = 110/300 (36%), Gaps = 9/300 (3%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F GSF+ AA +LG++TS +S I +E L L R+TR I LTE G+ +F + Sbjct: 10 FVEVVNSGSFTAAARKLGVSTSHVSRRIDALECRLSTRLLYRTTRQITLTEVGKMYFEQC 69 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 DL+ F ++ + + ++I ++ K A L+ P + Sbjct: 70 NDLIEKFAEVEALVTQMQTEPVGTLKITAP-SVFGEKFIAPLVNDFIDVHPRLSVEFHF- 127 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 N V D + + ++AI D L + ++ + +P + L P+ Sbjct: 128 -TNDVVDLVHDG-YDLAIRTGD--LKDSTLMAKKLAPRKLYVCASPAY-LREFGAPVNID 182 Query: 193 QLRLYPN-IMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVRE 251 L+ + I + D+ + + + + + G GI LPDY V + Sbjct: 183 DLQNHNCLIGLVDSWSFQDGGATVTIKPRGRWHGNSGSAVLDAALHGLGIAQLPDYYVSQ 242 Query: 252 AMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPNGILTGIYQDLLHREN 310 + LV DS + + + + + ++ R++ Sbjct: 243 KILSGELVEVLADYQAPDSAVWAVYPFNRNLSAKVRQFVDFLSDHFQHHLPWRIEAQRDD 302 >UniRef50_Q47Y42 Transcriptional regulator, LysR family n=2 Tax=Alteromonadales RepID=Q47Y42_COLP3 Length = 302 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 64/300 (21%), Positives = 113/300 (37%), Gaps = 18/300 (6%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 +++ F GSF+ AA+ LG+ + +S + R+E L V L RSTRS LTE+G Sbjct: 4 DLNDMMVFLAVVETGSFTLAADRLGMPKANVSRKVSRLEKNLAVTLLERSTRSQHLTEAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R + + + + + ++I + + + L +Q+P Sbjct: 64 RRYLAHCKRIHEELDLATASVCELFHSYTGELKIGAS-VASGQQVLRPALGKFMRQYPDL 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + I ++ I L+ + ++GAI +P + LA Sbjct: 123 KVQL---NLVNRRVDFIEEGFDVVIRI--GQLNDSMLIAKKLGAINRKIFASPSY-LAKQ 176 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKK----------VGWLLHGQESILVPDFNTKCQCQ 235 P QL + +++ + NK + L Q +LV DF+ Q Sbjct: 177 GNPDKVEQLTEHQLLIMNPLNISGNKDLKLPLTSTDHETFTLDCQPRLLVDDFSMLKQAI 236 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 + G GIG LPDYM R+ + LV + L +H A + + Sbjct: 237 VDGLGIGVLPDYMCRQEVASGQLVNILPDWGMAKVDIYALYPKHRAKIPKVKAFIDFVSE 296 >UniRef50_C6BS33 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BS33_DESAD Length = 298 Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats. Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 7/295 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 F+ E++ AF T GSFS AA LG S IS I +E L + LF RS + ++T+ Sbjct: 2 RFSIEHIEAFVTVVDTGSFSAAARSLGKVQSQISTAIANLEDDLGITLFDRSGKYPQITQ 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G K+ LL + + D ++ G + +R+ +++ + T ++L +++FP Sbjct: 62 KGEELLFKSRKLLRQSEKLIKHADRLALGEQTLLRLALDEYMPL-HITTQVLNSFQERFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 T + V V + + QA++ I P + G+ + ++ + + AP+HPLA Sbjct: 121 TIDLEVLWGAVGNVQKNVSSGQADVGIDVPVDNIASSGLSFKKLSLMEFCAVAAPNHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + L+ Y M + + L D + + G Sbjct: 181 DMKA-LTKETLQSYRQAMGMSQHGSRLPDS--FKKSDQVWLFEDSRLIHRLVLAGTVWAG 237 Query: 244 LPDYMVREAMTQSLLVTRQI---HNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 LP MV E + LV I N + + QW+ + F Sbjct: 238 LPRNMVAEDLLSGKLVELPIKLAENELKGIFYYVWNVAHELTPAEQWLCENFGKK 292 >UniRef50_UPI0001907E1C LysR family transcriptional regulator n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI0001907E1C Length = 300 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 59/294 (20%), Positives = 119/294 (40%), Gaps = 9/294 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + E L AF A G S A LG SA+S +I E L +LF ++ R ELT+ G Sbjct: 5 SLERLRAFVAVAEQGGLSAAGRFLGKAQSAVSESIAATEGQLGYLLFRKTGRRTELTDHG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 +A L A K + + +EA + ++ ++ T + ++ +++FP Sbjct: 65 VALLPEAKATLEAADAFKAKAVSFQGNVEAELSFAVDVMVPTSR-LTAVINRFQREFPYT 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++V +E + +NQA+ A+ + + + HPLA Sbjct: 124 ALSVYSESLGSTLQTVWDNQASFAV-IGTLPDAPAEFYTAPLCEVPMCLVVGSAHPLAQA 182 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 EPI++ L + +++ D + + + ++ V D +K + G G G +P Sbjct: 183 SEPISKETLCQHNQLIISDKTS-RSSGRSFGVFSEKFWRVADLGSKLEFLRAGLGWGLMP 241 Query: 246 DYMVREAMTQSLLVTR-----QIHNPRQDSRMLLATQH-SATGQVTQWIKKQFA 293 +++V + L+ + + + + +A + G +W+ + Sbjct: 242 EHLVEDDFRTGRLLRKRSEVENLPDGWMPIPLSIAYKRARPPGPAGKWMIENLR 295 >UniRef50_C6WVS7 Transcriptional regulator, LysR family n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVS7_METML Length = 294 Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 123/296 (41%), Gaps = 8/296 (2%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + E + GS+++AAE+L + SA++Y ++++E+ L + F R LT Sbjct: 2 PNISLEQWRSLIAVVETGSYAQAAEKLYKSQSAVTYAVQKIESLLALKAFEIQGRKAVLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G+ +R+A L+N+ ++ + +S G EA + I ++L+ + L ++ Sbjct: 62 PTGQMLYRRALALVNEANDLEAAANRLSAGWEAVIHIAA-EILFPTRLLLNCLNQFGQES 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + V G DA+ +A++AI + G EI I+ DHPL Sbjct: 121 PHTRVELIESVLGGTSDALYKGEADLAI----SPNIPSGFLGDEIMTIQLIAVAQCDHPL 176 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 + + L+ + +I+V D+ +K + + V + T + +G G Sbjct: 177 HQLNRVLTYRDLQSHRHIVVRDSGAKRDK-STATIEVNQRWTVSNIATSIEALTMGFGFA 235 Query: 243 FLPDYMVREAMTQSLLVTRQIHNP--RQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 +LP + E + L + R L+ + G + + + Sbjct: 236 WLPASHINEQLQSGQLKALPLREGGIRIIPLYLIYARPDLAGPGVRRLAEILMQAA 291 >UniRef50_Q1N6N4 Transcriptional regulator, LysR family protein n=1 Tax=Bermanella marisrubri RepID=Q1N6N4_9GAMM Length = 300 Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats. Identities = 62/306 (20%), Positives = 108/306 (35%), Gaps = 21/306 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L AF A SFS+AA L LT A+S I +E LD LF R R LT + Sbjct: 1 MDTQSLQAFIAVAETESFSQAAHRLHLTQPAVSKRIAMLEDTLDCQLFDRLPRKATLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G KA ++++ IK + ++S + +RI + + H +L+ +P Sbjct: 61 GEALMPKAKHIVSELLEIKTELASLSGDVSGTLRIGTSHHI-GLHHLPHILRKFHSTYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + +A+ N + +IA +D I F + HPL+ Sbjct: 120 VKLAMQFLGSEAACEALANGELDIAFATLPLE-QDPKLDMQAIWRDPLTFVCSHTHPLSK 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----------LHGQES----ILVPDFNT 230 I L + I+ E T L + ++ T Sbjct: 179 QKN-IHLKDLTQHEAILPEPNTVTFEIIEAAFKKEKLSLQAALPSRYRETISMMSSYMET 237 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 +G G LPD+M ++ L+ + + +L + G + Sbjct: 238 IKMMASVGLGWAVLPDHMAQD----KDLIRLNLGIHPYRNLGVLQRKGKTLGSAGKAFLA 293 Query: 291 QFAPNG 296 +G Sbjct: 294 ILPNHG 299 >UniRef50_Q2RHG4 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHG4_MOOTA Length = 302 Score = 246 bits (629), Expect = 8e-64, Method: Composition-based stats. Identities = 51/302 (16%), Positives = 105/302 (34%), Gaps = 10/302 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L+ F T G+ S AAEEL LT A+S ++ +E + L R R + LT + Sbjct: 1 MNINHLITFITTVEKGTLSAAAEELHLTQPAVSKQLQALEDYFGLRLLERRGREVRLTAA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G +R A + + +R + ++Q + R+ + + RL+ ++++P Sbjct: 61 GEICYRHARIIASHLNQTRRELAELTQLVRGRLLLGAS-TTPGQYILPRLIGAFRREYPR 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ +T V + + ++ G + Y+ + + P H LA Sbjct: 120 VEVILTIADTQEVVQRLQEGEIDLG-VVGAAGGRGKNLSYSRLAGDELVLIVPPGHRLAG 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 I+ +L+ P + E + T L Q + + Sbjct: 179 A-TAISPGELKEEPLVWRESGSGTRRVVEERLAAAGFTVDPEQIVMELGSTEAIVSAVEA 237 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 G GI + + V +++ L + + L + + A + Sbjct: 238 GLGISLVTSWAVEKSVKLGRLAVVTLQGVDLKRDLYLVRRRQPLSPAAEAFVNFAADHQP 297 Query: 298 LT 299 Sbjct: 298 RP 299 >UniRef50_B2SUE3 Transcriptional regulator n=23 Tax=Proteobacteria RepID=B2SUE3_XANOP Length = 314 Score = 246 bits (628), Expect = 9e-64, Method: Composition-based stats. Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 3/296 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + E L R GSF+ AA+ L S ISYT+ ++E L V LF R T++ Sbjct: 3 ISLEALQILDAIDRRGSFAAAAKVLFKVPSTISYTVAKLEEDLGVQLFERVGPKATPTQA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR R+ LL ++ R+ ++ G E+ V I ++ +L ++L + Sbjct: 63 GRELLREGRHLLRAAQELEVRVRRVASGWESDVAIGLDAVLPAALLQPQIL-DFYTVADS 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V +E +G W+A+++ + ++ I A GGG IG +R+ FA+A HPLA Sbjct: 122 TRLRVLSESLSGGWEALLDRRVDL-IVAAGEGPSGGGYVAEPIGTLRFVFAVASTHPLAS 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + ++L + I V D+A + + LL G++ + VPD TK Q+ G G GFL Sbjct: 181 AG-VLGAAELAEHRAIAVADSARRLLPRTVGLLSGRDVLTVPDMRTKLLLQLAGAGYGFL 239 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 P+ R A+ L Q+ + D LA + G+ W ++ G+ Sbjct: 240 PEPYARGALQDGRLREVQVETHKPDETFYLAWRPGEEGEALGWWRRALRSEGLFDS 295 >UniRef50_C8SVH4 Transcriptional regulator, LysR family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SVH4_9RHIZ Length = 307 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 63/298 (21%), Positives = 110/298 (36%), Gaps = 14/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +L F A SFS A LGL S +S I R+E L LF R+TR++ LT Sbjct: 1 MIDLNDLRVFERVAATSSFSAAGRALGLPKSTVSRNIARLEQQLGARLFQRTTRAVILTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + DL+ ++ +S +R+ + + +R L +FP Sbjct: 61 AGEALQARCADLMARIDETVAYVEGLSGEPRGLLRVSA-GIGFGINVLSRHLPEFLARFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +++ ++ + D + + ++AI L + T +G++R A APD+ L+ Sbjct: 120 HVDVSL--DLTSRDLDLVAE-RVDVAIRM--GPLPDSALVATRLGSVRRCLAAAPDY-LS 173 Query: 184 FVPEPIAESQLRLYPNI------MVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 +P+ + L + I T H + + V D T Q Sbjct: 174 RHGKPLTPADLSKHECIEMPRGDGRMRTWHFYRGGEMAAVDVHNRVSVNDALTIHQLVRN 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAP 294 G G+G L Y+ + + LV + LL Q + Sbjct: 234 GAGLGVLSTYLCVDDFAEGRLVPLLADWDIAPVEVNLLFPSKRELSQTVRSFVDFMRK 291 >UniRef50_C6CWT6 Transcriptional regulator, LysR family n=5 Tax=Bacillales RepID=C6CWT6_PAESJ Length = 302 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 99/292 (33%), Gaps = 9/292 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F T A +F++AAE L S ++ IK +E L V LF R + + LT + Sbjct: 1 MELRQLNTFCTVATTLNFTRAAEALSYVPSNVTMQIKALEEELGVRLFDRLGKQLALTTA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ F A +L + + +Q + + I N+++ + Q + Q P Sbjct: 61 GKRFLTHAQGVLEKLDEARSVVHDNAQ-LSGTLTISANEVIC-SYRLPPVFQRFRSQHPG 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + + +I D + G+ + + APDHPLA Sbjct: 119 VRLIFRSVPNQELKQTLFEGTTDIVYML-DEPICSSGLVVEPLVEENFRLLAAPDHPLAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + + E + + +C I G G Sbjct: 178 R-TVLKLEDFHEEVFLTNEKGCPYRTMFDRSFEKEGIDSITYLEFQSAEAIKKCAISGIG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWIKKQ 291 I FLP+ +V + + LV P Q +L + + + Sbjct: 237 IAFLPEIVVEAEVERGELVVLPWQIPDLQVYTQMLRHKDKWLSPIMLSFIEA 288 >UniRef50_B6R2N2 HpkR n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R2N2_9RHOB Length = 284 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 8/286 (2%) Query: 12 AFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRK 71 F AA GSFS A LG SA+S I +E L LF R+TR +LTE+G Sbjct: 1 MFIAAAESGSFSAAGRTLGKGQSAVSTGIVNLEVDLGFELFDRTTRKPQLTENGERMLTY 60 Query: 72 ATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTT 131 A +L + D+I G E VR+ ++ L P ++ L ++FP +I + + Sbjct: 61 ARAVLMQVDNMTTAADSIFSGEETSVRLMLDDALLLPS-LSQFLIEFGERFPATRIDLLS 119 Query: 132 EVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAE 191 V + + +QA+I + + G++ IG + + P+HPL + E I Sbjct: 120 GVSPDIPSIVAQDQADIGLMFSGGSVQ-KGVEQVFIGNLPFVSVCVPNHPLTKLTE-IGA 177 Query: 192 SQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDYMVRE 251 ++L + +++ ++ + L + F+ + + G G +LP+++V Sbjct: 178 NELLSHRQLLLRSPQGSVLAQFPEL--STQVWHATSFHALRELVMQGVGWAYLPEHLVST 235 Query: 252 AMTQSLLVTRQIHNP---RQDSRMLLATQHSATGQVTQWIKKQFAP 294 A+ L + + +H+ G W+ Sbjct: 236 AIASGQLARLNLRFEHKLWSPPVECIKLKHARMGPAVSWLFDSIKN 281 >UniRef50_UPI0001745DD5 transcriptional regulator, LysR family protein n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001745DD5 Length = 290 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 10/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L AR G+FS+AA+ ++ ++S I+++E L LF R R +LT++ Sbjct: 1 MELHQLRYMVAVARTGNFSRAAQTCHVSQPSLSQQIQKLEDELGERLFDRLRRHAKLTQA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F +A +L + A R + + R+ + + + P +L+ ++P Sbjct: 61 GERFLPRAVRILEEMDAATREARAANDLDQGRITVGVLPTI-APYLLPKLIAAFSAKYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ V + + + + +IAI + L + E+ A+ +H L Sbjct: 120 VQVVVHEDTTARLRELTAACEVDIAIAS--LPLQDERFEVRELFDEELLLALPNNHRLVD 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + I L I++++ ++ + + H Q S T G G Sbjct: 178 QKKII-PEDLLEEKFILMKEGHCLGDQVLHFCHRQDFHPQVSCRSAQMETVQSLVQSGMG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAP 294 I +P ++E V R + +P ++ + G+ K Sbjct: 237 ITLVPRMALQED-RSVKPVYRSLSDPSPKRTIVAFWPRQRPLGKAAAAWLKLMEE 290 >UniRef50_P25544 RuBisCO operon transcriptional regulator n=13 Tax=Proteobacteria RepID=RBCR_CHRVI Length = 302 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 110/297 (37%), Gaps = 10/297 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + L F AR S+++AAEEL L+ A+S ++++E + + LF R + + LTE+G Sbjct: 4 SLRQLRVFEAVARHNSYTRAAEELHLSQPAVSMQVRQLEDEIGLSLFERLGKQVVLTEAG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R F + + ++ ++++ +RI + + RL+ + +++ Sbjct: 64 REVFHYSRAIGQSLREMEEVLESLKGVSRGSLRIAVASTV--NYFAPRLMAIFQQRHSGI 121 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + + + + +N ++ + ++ PDHPLA Sbjct: 122 GLRLDVTNRESLVQMLDSNSVDLVLMGVP--PRNVEVEAEAFMDNPLVVIAPPDHPLAGE 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESIL----VPDFNTKCQCQILGEGI 241 I+ ++L +M E+ + T + ++I + Q G G+ Sbjct: 180 -RAISLARLAEETFVMREEGSGTRQAMERFFSERGQTIRHGMQMTRNEAVKQAVRSGLGL 238 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 + + + + LVT + P + L+ + ++ Sbjct: 239 SVVSLHTIELELETRRLVTLDVEGFPDRRQWYLVYRRGKRLSPAAGAFREFVLSEAA 295 >UniRef50_C7CM24 Transcriptional regulator, LysR family n=9 Tax=Proteobacteria RepID=C7CM24_METED Length = 307 Score = 245 bits (627), Expect = 1e-63, Method: Composition-based stats. Identities = 64/292 (21%), Positives = 123/292 (42%), Gaps = 6/292 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRS-TRSIELTES 64 T + L F T GSF+ A L TS +SYTI +E L + LF R TR +LTE Sbjct: 8 TLDQLRVFLTVVETGSFAAAGRRLNRATSVVSYTIANLELQLGLSLFDREATRRPQLTEG 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR +A + + A++ ++ + G+EA + ++ +L L + FPT Sbjct: 68 GRAVLAEARTVAHGIDALRAKVSGLLGGLEAELGF-VSSVLMPGARLVDALTAFQAAFPT 126 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + E + + +A++ I D ++ +G + AP+HPLA Sbjct: 127 VSLRLNVEALGAAQQFVTDGRADLGITVELWTRDSDPLELISVGEVEMLPVAAPNHPLAG 186 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + R + +++ D + +++ + + + + D +TK + G G G + Sbjct: 187 ADGLVPGAA-REHVQLVITDRS-PLSQDQEFGVVASRTWRLSDLSTKHTLLLAGIGWGSM 244 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDS--RMLLATQHSATGQVTQWIKKQFAP 294 P +MV + LV + R+ ++ G +W+ ++ Sbjct: 245 PAHMVEADIAAGRLVELSLPEVRRRRLPLTVIYRTDHPPGPAGRWLIRRLVE 296 >UniRef50_B4SME3 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=B4SME3_STRM5 Length = 314 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 59/305 (19%), Positives = 112/305 (36%), Gaps = 20/305 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + + LLAF A GS AA LGL+ SA+ I R+E L LF R+TR + Sbjct: 1 MPRMDSISTLLAFVRTAEAGSIVGAARVLGLSASAVGKRIARLEQELGTRLFQRTTRRVH 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT+ G ++ L++ + + +RI + + + +L ++ Sbjct: 61 LTDEGELLLQRCRRALDELSEAQADLAQRQHAPSGLLRIGLPTI--GYRFLLPVLPGFQQ 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P Q+ + +N +++ + I + + L + +G R+ + AP + Sbjct: 119 RYPQVQLEL---DFNDRIVDVVSEGLDAVIRSGE--LADSSLTARRLGGFRFILSAAPGY 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG---------QESILVPDFNTK 231 L P S+LRL+ + T K W L G ++ + Sbjct: 174 -LQAHGTPGDVSELRLHTALRFRYP--TTGKLHPWQLPGIEGDAGARLPTAMTCNNMEAV 230 Query: 232 CQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKK 290 I G+ ++PD++ +A+ L P + L + Sbjct: 231 LAAAIGCMGLAWMPDFLAADALADGRLQRVLPALPTHQGQFSLLWPGGRHPSARLRVFID 290 Query: 291 QFAPN 295 + Sbjct: 291 YAVAH 295 >UniRef50_Q0VTN2 Transcriptional regulator, LysR family n=3 Tax=Oceanospirillales RepID=Q0VTN2_ALCBS Length = 312 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 66/303 (21%), Positives = 126/303 (41%), Gaps = 10/303 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T + A G ++ AAE L + SAISY ++++ET L V FT R + Sbjct: 1 MSAKITLDQWQALLAVVDEGGYASAAEALNKSQSAISYAVQKIETELGVRAFTLEGRRAK 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+G+ +R+A L+ + ++ +SQG E VR+ + L+ L + Sbjct: 61 LTETGQMLYRQAKVLVEEANRLESAAIQLSQGWEPLVRVTADG-LFPQHCMLSALDAFAQ 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 P ++ + + +G +A++ +A++ +G G + +R+ A DH Sbjct: 120 HSPLTRVEYSETILSGSDEALLRKEADVVVGGR----VPPGFFGDPLMRVRFLAVAAADH 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PLA E + LR + I+V D+ L ++ V +T+ G G Sbjct: 176 PLAQAKE-LTHEDLRHHRQIVVRDSGSRR--IDSGWLGAEQRWTVSHASTRMAAIRRGLG 232 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 ++P+ + + + L + R L+ GQ +++ ++ L Sbjct: 233 FAWVPESEMGDGLETGALKVLALDEGVERMMDLYLIYADGQYAGQAARYLGERIRDAAAL 292 Query: 299 TGI 301 Sbjct: 293 PCP 295 >UniRef50_B2T1K1 Transcriptional regulator, LysR family n=63 Tax=Burkholderia RepID=B2T1K1_BURPP Length = 367 Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 107/298 (35%), Gaps = 12/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +++ F A GSF++AA + ++ + + + +E L L R+TRS+ LTE Sbjct: 1 MDHLQSMRVFVKVADLGSFARAASAMDISNAVATRHVADLEGRLGTRLLNRTTRSLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 SG+ + +A +L++ +++ + + +RI +++ + A +LQ +++P Sbjct: 61 SGQVYLERARQILDELEDVEQMVVARNHEPVGTLRIVAP-VVFGLHNLAPVLQTYAERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ ++ + + I + P + L Sbjct: 120 KV---IPDVTLVDRQVDLVEEGFDVGVVIARQ-MRSASIVTRRLTTGCMTVCATPAY-LE 174 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L +P + + D + + I+ + Q +LG Sbjct: 175 KHGMPTRPEHLLEHPCLSLPSEYWGDERVFTGPEGEVRVRPSNVIVANNTEMLRQFALLG 234 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPN 295 GI LP Y++ MT+ LV + +A + + Sbjct: 235 MGIAILPSYLIGRDMTRGRLVRLLGDYRLPQVEINIAYPSRRHLPAKVRTFIDHLVEH 292 >UniRef50_B5EGJ2 Transcriptional regulator, LysR family n=5 Tax=Geobacter RepID=B5EGJ2_GEOBB Length = 300 Score = 244 bits (625), Expect = 2e-63, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 101/297 (34%), Gaps = 11/297 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A+ +F+KAAE L + A+S +K++E L++ LF R + + LT Sbjct: 1 MDVRQLRYFIEVAKVKNFTKAAEALHIAQPAVSMAVKKLEQELELSLFNRQDKKVSLTAE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F A +L+D A + + + + VR+ I ++ +++ KK +P Sbjct: 61 GEIFLPHAKRILDDLRAAELEMAELKGLSKGEVRLGIPPMISA-YFFPDIIRDFKKSYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++V E + I + ++ + A + ++ + PDHP A Sbjct: 120 LHLSVLGEGAWRIQKMIGQGELDMGVVAGGNFPE--TLEVRRFLREEIVICVPPDHPFAQ 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 ++ + P + ++ + G F+ G G Sbjct: 178 RKS-VSLVEFIREPLVFYKEGYYIREFFLEVLKGAGSAPNIVFETNLFSLVKSLVRNGTG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 I +V LV P ++ + + + + Sbjct: 237 ISIFLRMVVAADTD---LVAVPFDPPLHLDLLIAWKKDTYLSLANRAFVDFLLQHAA 290 >UniRef50_D0YZZ9 Transcriptional regulator LysR family n=1 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0YZZ9_LISDA Length = 292 Score = 244 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 10/296 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 F+ E L AF AA GSFS A +L S IS + +E L+V LF R+TR +LTE Sbjct: 3 FSIEQLEAFVAAAETGSFSAGARKLNKAQSVISTAVANLELDLNVTLFDRTTRKPQLTEH 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G KA +L+ + D + QG+E+++ I + + + + L ++ +P Sbjct: 63 GHTLLVKAKRILSQCQQLVANADELQQGVESKLTIALQSMTMSQP-LTQALAKFEQDYPF 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + + + + +A I I+ IG++ +AP HPLA Sbjct: 122 VEIEILNATEDEIVSLLNSGRAQIG-ALLQLDTLPQEIEAHGIGSLAMVCIVAPSHPLAR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + I L + I++ + ++ W + + + G G + Sbjct: 181 KSQ-IDWPDLITHRQIVL---SGRHHQHKRWQV-SDSIWSTESAISAVNLVMGGIGWTVV 235 Query: 245 PDYMVREAMTQSLLVTRQIHN---PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 P MV++ + ++L + ++ T+ G + ++ + Sbjct: 236 PLDMVKDLIAANVLTRLPLSFEGQTWHQGVDIVWTRLHPAGPAARQLRLYLTEARL 291 >UniRef50_Q1QYG6 Transcriptional regulator, LysR family n=4 Tax=Gammaproteobacteria RepID=Q1QYG6_CHRSD Length = 307 Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 122/289 (42%), Gaps = 8/289 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T G F++AAE + + S +++ + ++E L + + R + LTESG Sbjct: 5 TLAQWRMLAAVVDHGGFARAAEAVHKSPSTLNHAVHKLEEQLGIRVLEPVGRQVRLTESG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R+A LL A++ +++G+EA V + ++Q ++ P A L + +++P Sbjct: 65 AMLLRRARQLLESAEALEDVAGRLAEGLEAEVVLAVDQ-IFPPDALAHALDAVSREYPHV 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + V NG + + + +A++ + + G + + + PDHPL + Sbjct: 124 RVQLHETVLNGGIEMLYDGRADLVVSG----IAAQGFLGEPLVNVTFLAVSHPDHPLQHL 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + L + ++V D+A + GW L ++ + T G G ++P Sbjct: 180 GRELDLRDLEQHRQLVVRDSALRQSMDAGW-LKAEQRWTLSHLETSLDMLCRGLGFAWMP 238 Query: 246 DYMVREAMTQSLLVTRQI--HNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +R+A+ Q LV + R+ L+ G T+ + Sbjct: 239 TTRIRDALRQGTLVPLPLTVGGRREVPIQLIFRDRDRAGPATRATARSL 287 >UniRef50_Q67NJ1 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67NJ1_SYMTH Length = 311 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 97/296 (32%), Gaps = 10/296 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S ++L F GSF++AA+ L LT +++ + +E L V LFTR + + LT Sbjct: 9 SSMLLQHLTTFCRVVEEGSFTRAAQVLNLTQPSVTKQVGALEDYLQVQLFTRQGKRVHLT 68 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G + A +++ + + V + + LL ++ Sbjct: 69 PVGELVYDYARQVIHLVQRCEEAVREYRSPGSGSVTVGCVHTI-GLFTLPELLAAYVREH 127 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I V T +++ + ++ + + I+ + P Sbjct: 128 PRVKINVKTGNNRETVTMLLHGEVDVGLVTTPQV--HERIEVVPLFEDPLVVVAGPSFA- 184 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILG 238 A +P ++ + L P I A L + Q + + LG Sbjct: 185 ADLPPVVSNADLAQLPFIGYVRGARFRMTTDQVLEEMGIQPQFVMEFDNHEAIKTMVALG 244 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQ--DSRMLLATQHSATGQVTQWIKKQF 292 GI P V+ + LV + + + L+ + + + Sbjct: 245 FGIALEPVSAVQRELISGQLVRLNVPGLPRLSRTTSLILRRGERRSEAVRAFLSLL 300 >UniRef50_Q885P4 Transcriptional regulator, LysR family n=2 Tax=Pseudomonas syringae group RepID=Q885P4_PSESM Length = 301 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 114/300 (38%), Gaps = 15/300 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN E++ F GSF+ A+++LGL+ +S + ++E L V L RSTR ++ Sbjct: 1 MNP---FEDMRIFCQVMESGSFTAASDKLGLSKQFVSRRLMQLEERLGVRLLNRSTRRLD 57 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 +T G+ ++ A LL + +++ I + +R+ L + H LL V + Sbjct: 58 VTPLGQSYYESALRLLAEVEQVEQGITGQNSEPRGTLRLSAP-LSFAVAHLGCLLPVFLQ 116 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++ + V + +I+ ++ + +L+ + I +I + +P + Sbjct: 117 RYRDVAVEV---DLSDRPVDVISEGYDLVLRI--GVLEDSSLIARRIASIDRVYCASPTY 171 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDT----AHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 LA P L + + + L+ + + + Sbjct: 172 -LAERGTPQQPEDLHSHECLPYGHSRHVQWRFQGTGKPVSLNVSGRMRANNGELLKDAAL 230 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G GI +LP ++V +A+ LV P + + QH + Q + Sbjct: 231 AGLGITYLPTFIVGDALRAGSLVRVLDELRPEPLTLSAVYPQHRQASRPVQAFIEFLRER 290 >UniRef50_B9JHJ1 Transcriptional regulator protein n=10 Tax=Rhizobium/Agrobacterium group RepID=B9JHJ1_AGRRK Length = 307 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 108/298 (36%), Gaps = 13/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + AF AA S+ AA G + SAI + R+E L V LF R+TRS+ LTE Sbjct: 1 MESLTGIAAFVHAAEQQSYVAAARVTGASPSAIGKAVGRLEARLGVRLFNRTTRSMSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F+ + +++D + I + R+R+ + ++ +L+ + FP Sbjct: 61 EGAVFYERCKRIIDDLGDAEAAILQSRERPTGRLRVSMPHIV-GHHLFMPILRSFVESFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + E ++ ++ + + + L G+ +G + +P++ + Sbjct: 120 GIELDIDFE---DRVVDLVAEGVDLVVRSGE--LADSGLIARVLGQQHFVICGSPEY-VE 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-----QESILVPDFNTKCQCQILG 238 P + L + I + + ++++ + + + + G Sbjct: 174 RRGRPQTPADLAGHACIHFRYPSSGRIALWAFQAPHDRLILPKNLIFNNTDAGLRATLDG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPN 295 G+ LP Y+ + +L + L Q + Sbjct: 234 LGLSHLPVYVAEPYIRSGILTPVLTSFMVPFGSLSLVWQSNRQLSPKVRAFVDFMVER 291 >UniRef50_B7KW28 Transcriptional regulator, LysR family n=6 Tax=cellular organisms RepID=B7KW28_METC4 Length = 296 Score = 243 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 112/299 (37%), Gaps = 7/299 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T + L F A GSFS A +LG S IS ++ +E+ + LF RS+R Sbjct: 1 MLDQLTLDQLRTFVAAVDTGSFSAAGRKLGRAQSLISQSLANLESQSGIKLFDRSSRYPI 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR A + K ++ G+E V I ++ +L+ + + + Sbjct: 61 LTEAGRVLLAHAPATVAAAETFKSHAKDLAGGLEPEVSIVLD-VLFPIQVLTAAVVAFQP 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 FP + V E V +++ + A+ LL + + + +P H Sbjct: 120 AFPRTPLRVQVETLGAVIAPVLDGRCAFAVAGATPLLP-PELAREPLCQVELVMVASPAH 178 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 PL I + L + +++ D + + + + + + D K G G Sbjct: 179 PLGRRTGTIPTADLAEHVQLVLTDRSELTKGRE-FGVFSPRTWRLADLGAKHAFLRSGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQ----DSRMLLATQHSATGQVTQWIKKQFAPN 295 G +P +V + + LLV I + + G +W+ Q A Sbjct: 238 WGGMPLDVVADDLASGLLVRLDIAAVPKGGLFLPMWAVYPIERPPGPAGRWLITQLASP 296 >UniRef50_Q5FP23 Transcriptional regulator n=1 Tax=Gluconobacter oxydans RepID=Q5FP23_GLUOX Length = 303 Score = 242 bits (620), Expect = 8e-63, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 116/303 (38%), Gaps = 17/303 (5%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M FT + F GSFS AA LGL+ + ++ I +E+ L + LF RSTR + Sbjct: 1 MLDRFT--GMQVFAKVVAQGSFSGAARSLGLSQTMVTKHIAALESRLGISLFHRSTRKLS 58 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR FF ++ +L D +++ + +Q +R+ + + +H +L + Sbjct: 59 LTEPGRLFFIRSQKILTDLEEMEQEVSAENQEPRGLLRLNAP-VSFAIRHVGPILPEFSR 117 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + P + + + + D I ++ + + + + + + AP + Sbjct: 118 RHPLVTVEL--GLDDRRIDPITEG-WDLTLRIGR--MPSSALRSRRLAQVDFVVCAAPSY 172 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES------ILVPDFNTKCQC 234 L P + + L + + + + + +G+ + + + + + Sbjct: 173 -LEEYGTPRSVADLPNHRCLGYTLGDEISSARWSFGPNGERTVPVSGPMHANNGDILREA 231 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSR-MLLATQHSATGQ-VTQWIKKQF 292 + G+GI + P ++V + + LV + P + + + + Sbjct: 232 AVAGQGIIYQPTFIVSDELKSGRLVPLPLDVPVMTGPELHAVYAPTPHVPLKIRAMIDFL 291 Query: 293 APN 295 Sbjct: 292 VER 294 >UniRef50_C6HY10 Transcriptional regulator, LysR family n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HY10_9BACT Length = 303 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 56/305 (18%), Positives = 106/305 (34%), Gaps = 10/305 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L F A + SF++A E L LT A+S +K +E L V LF R+ + I LTE+ Sbjct: 1 MTNDQLKVFLKVAEYQSFTQAGEVLFLTQPAVSLQVKSLEKDLKVSLFERTGKKILLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A ++ + + + + +RI + + LL + Sbjct: 61 GRKLLPLARSIIQQMEEAREVVRPLEDMPQGHLRIGAS-MTIGTYLLPPLLAQFLRANSR 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGG-GIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + + ++ ++ + + G +D + R + +HPL Sbjct: 120 ITASLAVANTHQILHDLKASEIDLGLIEGEPTRTQGISLDRKFLDHDRLVLIDSLNHPLL 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTKCQCQI 236 P++ LR P I E + T LL + V + + Sbjct: 180 PSSGPVSLDALRKVPFIGREPGSGTRQVIERELLEKNLPPDSFETVMTVDNPEAIKELVA 239 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 LG G+ F+ +R LL T + + + + T + Sbjct: 240 LGSGVAFISSLCLRPH-ESGLLRTVAVEDFSPVRNLWIFVPQKKTSPPADLFLQLLVKER 298 Query: 297 ILTGI 301 + Sbjct: 299 LPKDP 303 >UniRef50_Q2SMQ7 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SMQ7_HAHCH Length = 330 Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats. Identities = 55/309 (17%), Positives = 112/309 (36%), Gaps = 14/309 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L AF A SF+KAA E+GL+ S ++ + +E L V L R+TR + LT Sbjct: 27 MDKLAGLTAFVNVAEAESFAKAAREMGLSRSQVNRRVIALEDELGVTLLARTTRHVSLTP 86 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ F+ +A +LND + I + + ++I + + H + L ++P Sbjct: 87 TGQAFYLRAKSILNDLREAETAIQSDHAEPQGDLKINAP-MSFGTMHLSSALADFMTRYP 145 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + V + + ++ +I + +T + + I + +P + L Sbjct: 146 NIRVHL---VLDDRFVDPVSEGFDITVRVAETR-EAPSLIEHTIVEAKRLLCASPGY-LQ 200 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL------LHGQESILVPDFNTKCQCQIL 237 P +L P + + A ++ + + + + Sbjct: 201 QHGRPRTIKELASRPCLHYGNLASGYTWRLRRGDAPETSVRVNGVLCCNNAEALRDAAVA 260 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPNG 296 G G+ LP ++ + LV+ + LL + + K Sbjct: 261 GLGVALLPTFIAGPELQTGRLVSVLPEYQAPPVYLSLLYPPNRHLAARVRVFVKFMQAR- 319 Query: 297 ILTGIYQDL 305 Y DL Sbjct: 320 FGDQPYWDL 328 >UniRef50_A1AYK1 Transcriptional regulator, LysR family n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1AYK1_PARDP Length = 300 Score = 242 bits (618), Expect = 1e-62, Method: Composition-based stats. Identities = 59/308 (19%), Positives = 116/308 (37%), Gaps = 17/308 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + L AF +A SF++A LG+++SA+ T+ R+E L V LF RSTR+I LT Sbjct: 1 MNSFGTLAAFVHSAETRSFTEAGRRLGISSSAVGKTVARLEEELGVRLFHRSTRAITLTA 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F + + +F KR + + + ++R+ + Q+ H L ++ FP Sbjct: 61 EGCRFLDRCYRIFAEFDDAKRELTQAAGKPQGKLRVGLPQIGI---HLMPHLIAFQRTFP 117 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + ++ ++ + + + L+ + + AP + LA Sbjct: 118 EIELEL---DFSDRLVNLVEEGFDAVMRIGE--LNDSRLTMRRLDGYHHRLVAAPAY-LA 171 Query: 184 FVPEPIAESQLRLYPNIMVED-------TAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 P ++L + + + + +S + ++ + Sbjct: 172 HRGTPDRPAELMDHACLRYRYPTTGKLAPWPLNGRGGAPSIDPPQSSVTNSIDSLLEMVQ 231 Query: 237 LGEGIGFLPDYMVREAMTQSLL-VTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G GI LPD++V +A+ L V H + +L T + Sbjct: 232 AGLGIALLPDFIVADAVAAGRLTVVLDRHGQDRRDFCILWPSSRHTAPKIKAFVDFMVSR 291 Query: 296 GILTGIYQ 303 G Q Sbjct: 292 LGAAGALQ 299 >UniRef50_Q2SCX5 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCX5_HAHCH Length = 296 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 105/289 (36%), Gaps = 15/289 (5%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + AF + G FS A +L L+ +S + ++E L LF R+TR + LT +G ++ Sbjct: 1 MRAFCAVVQEGGFSAAGRKLNLSKVLVSKYVGQLEDRLGARLFHRTTRKVRLTPTGEAYY 60 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + + LL + I+ R+ E +RI + H L+ ++ +++P + V Sbjct: 61 LRVSPLLRELDDIEARVRDEHGEPEGLLRIAAPAS-FAEIHLMPLVALMLEKYPGLTLDV 119 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + ++ Q ++A+ L + ++ I + + L P Sbjct: 120 R---LADRYVDLLEEQVDLAVRI--GYLQDSSLVAQKLADIPIVWCAGAAY-LERRKAPQ 173 Query: 190 AESQLRLYPNIMVE------DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + L + ++ + D + ++ + V + + G G+ Sbjct: 174 SPDDLAEH-CVIFDSNYSGGDYWPVPREGGVTRQPMRKRVSVNSARAAKELALAGMGLAR 232 Query: 244 LPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQ 291 LP +++ + + L P + + + ++ Sbjct: 233 LPAFVIGDELASGELRPVLQEYWPEASAVYAVYPHRRHLSARVRLFVEE 281 >UniRef50_P67661 Uncharacterized HTH-type transcriptional regulator yhaJ n=105 Tax=Enterobacteriaceae RepID=YHAJ_ECO57 Length = 298 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + Sbjct: 4 ERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKF 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR + LL + + +++G E + I L+ TP L+ L + Sbjct: 64 TNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIVTEALVPTPAFFP-LIDKLAAK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 Q+ + TEV G W+ + +A+I I I+ ++ + + APDHP Sbjct: 123 -ANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSSEINSRKLYTLMNVYVAAPDHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + PEP++E Y I V DTA LL Q + V K Q + G G+ Sbjct: 182 IHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGV 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P MV + + + L + +++A + + G+ W ++ Sbjct: 242 ATMPYPMVEKDIAEGRLRVVSPE-STSEIDIIMAWRRDSMGEAKSWCLREI 291 >UniRef50_B8GS61 Putative transcriptional regulator n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GS61_THISH Length = 308 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 54/305 (17%), Positives = 106/305 (34%), Gaps = 14/305 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 E + F GS + AA LG+ S +S+ + +E + L RS+R + LTE Sbjct: 1 MKLEGIRTFVAIVEAGSITAAARRLGVAKSVVSHRLSELEDSVGARLIQRSSRRLSLTEQ 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R + +L + RI + +R+ + + H L ++ P Sbjct: 61 GEMFHRFSARMLGELDEAVSRIAEEGHELRGPLRVAAP-MSFGLLHLGPALYPFLREHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + N ++ ++AI L + + + +P + LA Sbjct: 120 IQLDL---DLNDRMVDLVGEGYDMAIRI--GQLPDSTLVARRLVSSCSLLVASPAY-LAE 173 Query: 185 VPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P L + I+ D H ++ V + + I G Sbjct: 174 HGRPKHVEALSEHRGILYSNVHPNDQLRFRRADGTVTGHFATALQVNNGDAMRDAAIAGL 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDS-RMLLATQHSATGQVTQWIKKQFAPNGIL 298 G+ +PD++V +A+ LV ++ + + Q+ + + + A + Sbjct: 234 GLAVIPDFIVWQALADGRLVVVELDGSLPEVGVYAVFPQNRHLTAKVRALTEHLAAS-FG 292 Query: 299 TGIYQ 303 Y Sbjct: 293 DPPYW 297 >UniRef50_C6QF64 Transcriptional regulator, LysR family n=1 Tax=Hyphomicrobium denitrificans ATCC 51888 RepID=C6QF64_9RHIZ Length = 305 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 105/307 (34%), Gaps = 14/307 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E + AF GS+++AA L LT SA+S + +E L L R+TR + TE Sbjct: 1 MDKLEAMNAFAKVVASGSYAEAARRLNLTRSAVSKAVMELEQALGARLLDRTTRRVTPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++ + +L + +I + + +++ + + + + ++ Sbjct: 61 AGLAYYERCLAILAQVDETEAQISRLHDEPKGVLKVNAP-MSFGTLYLGDAVADFMIRYS 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ +T + + D + ++ + + + I R +PD+ L Sbjct: 120 DLKVELT--LTDRFIDPLEEG-VDVTVRI--GAMVDSSLIARRISPARIVLVASPDY-LK 173 Query: 184 FVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P + S L + + H +K + + + + + + G Sbjct: 174 AHGTPQSPSDLAEHRCLSYGHMTSMQRWHLTDKGKPVSVAIGACLSSNNGDVLREAALKG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 GI LP ++ + + L N P + L + T+ Sbjct: 234 IGIALLPTFIAGKDIAAKRLQIVLPENQPDDLTIHALYAPNRYLAAKTRVFIDFLVDR-F 292 Query: 298 LTGIYQD 304 D Sbjct: 293 GNTPSWD 299 >UniRef50_A9W9P6 LysR substrate-binding n=3 Tax=Chloroflexus RepID=A9W9P6_CHLAA Length = 301 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 52/296 (17%), Positives = 101/296 (34%), Gaps = 12/296 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F AR ++AA EL + A+S I ++E L + LF R RS+ LTE+ Sbjct: 1 MELRHLRYFEAVARHSHVTRAAAELHIAQPALSKQISQLERELGITLFDRVGRSLRLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A +L + + RV I + LL + +++P Sbjct: 61 GEALLPYARAILAQVEEARAAMAERIGLKAGRVTIGAPPTV-GAHLLPPLLTIFHQRYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + D + ++A+ A + + T + ++ HPLA Sbjct: 120 ITLRLHEAGIQSLLDLLEAGITDLAVVA--LPVTDEQLTVTPLLNEPLVLIVSTTHPLAR 177 Query: 185 VPEPIAESQLRLYPNIM----VEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 E + ++LR I+ E T+ Q + + T + G G Sbjct: 178 RSE-VMMTELRHERWILSPSSYELREATLKACREAGFTPQTVLEGGETETLVRFVAAGLG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPN 295 + +P V +V + + + L + + +++ Sbjct: 237 VSLVPALAVAGCTD---VVRLTVSDQHLTRSLGLVWRSDRTASPAARALREFLVNE 289 >UniRef50_A7IBY1 Transcriptional regulator, LysR family n=15 Tax=Alphaproteobacteria RepID=A7IBY1_XANP2 Length = 313 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 65/303 (21%), Positives = 116/303 (38%), Gaps = 12/303 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L F A ++ A +L LT SA S I +E LF R R I LTE+ Sbjct: 1 MTLEQLRIFVAVAEREHVTQGARDLNLTQSATSAAIAALEARYATKLFDRVGRRIVLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A +L +A ++ + ++ + I +Q + ++ + QFP Sbjct: 61 GRLFLSEAKAVLARVHAAEKVLTDLADLTRGSLVIAASQTI-ANYWLPPFIKRFRSQFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 IT+T + +GV I A++ + + +D + + PDH A Sbjct: 120 VAITLTIDNTDGVARRINEGLADLGLV--EGEIDDPSVSVAPFAEDELVLVVPPDHAWAH 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKV----GWLLHGQE---SILVPDFNTKCQCQIL 237 P ++L + P ++ E + T + L ++ S+ +P Sbjct: 178 DPRR-QPAELGVGPWVLREHGSGTRAIFETTLSQFGLAPRDLAISLELPSNEAVRSAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 G G+ + +V A+ LV ++ P+ L + + + + AP Sbjct: 237 GAGVTVVSGLVVSNALKAGSLVQVKLDLPK-RRFFALRHKEFSMTRAQRAFLDLIAPKPS 295 Query: 298 LTG 300 LT Sbjct: 296 LTQ 298 >UniRef50_D1RNP4 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RNP4_SEROD Length = 306 Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats. Identities = 56/293 (19%), Positives = 113/293 (38%), Gaps = 12/293 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + + + AF A SF++AA+ L +T SAIS +K++E +D++L R+TR++ LTE+G Sbjct: 5 SLQLVKAFVAVAEHQSFARAAQALNMTPSAISRLVKKLEQQVDMLLINRTTRAMSLTEAG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + +F + L R+ + +R+ + L + H A L Q+P Sbjct: 65 QRYFTDCSAALEQLRMAYERMRDEQSQPQGTLRVSTS-LSFGRLHVAPHLAAFMVQYPQL 123 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 +I + + I+ + +AI L + ++ R +P H L Sbjct: 124 RIDLL---MTDRYVDIVAERVAVAIRIGR--LPDSSLVARKLLNNRRILVASP-HYLQQH 177 Query: 186 PEPIAESQLRLYPNIMVEDT-----AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P +LR + ++ + + + + + + Q I G+G Sbjct: 178 GTPTTLEELRQHQCLVSTASHDGENWRLFGPAGATVFQPKGRMRADNGDAVKQFCIDGQG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFA 293 I F + E++ LV +++ + G + + Sbjct: 238 IAFHSAVTMAESIRLGELVQLLPQWTGRETGVYSVYPPGPVGPAARALIDFLT 290 >UniRef50_Q2RHB2 Transcriptional regulator, LysR family n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RHB2_MOOTA Length = 297 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 55/283 (19%), Positives = 107/283 (37%), Gaps = 12/283 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + LL F A SFS+AA L LT AIS I+ +E L R+ R + LTE Sbjct: 1 MLD-NQLLTFKAVAEQKSFSRAARVLHLTQPAISLHIQSLEEYFGTRLLDRNNRQVTLTE 59 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR + A +L + +K+ + IS ++ + + L + K+Q+P Sbjct: 60 AGRVLYNYALELSRLYDEVKKALADISGKVKGNLVVGA-TLTIGEYFLPSIAGEFKRQYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +IT+ + ++ + ++A+ + + ++ I P+H A Sbjct: 119 DVEITLRIANTQEIICRTLDGELDLALI--EGQAKHPNLIQEDLFQDELVLIIHPEHRWA 176 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQI 236 E I +LR P I+ E+ + T L + + + + Sbjct: 177 GRRE-ITPEELREEPLILREEGSGTRQITEAGLRKAGLELSTLKVVMELGSTQAIKEAVE 235 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 G G+ + +++ + +LL ++ +A Sbjct: 236 AGLGVAIISRLAIKKEIRYNLLREVRLQGIDFRRTFHIAYNRH 278 >UniRef50_A5W5M0 Transcriptional regulator, LysR family n=23 Tax=Proteobacteria RepID=A5W5M0_PSEP1 Length = 313 Score = 241 bits (616), Expect = 2e-62, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 105/301 (34%), Gaps = 17/301 (5%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + + + F A SF A++ LG++ SA+ + R+E+ L V LF RSTRSI LT Sbjct: 15 DMDSLSGFVVFNRVAETRSFVAASQSLGISASAVGKRVARLESRLGVRLFHRSTRSITLT 74 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G F ++ +L + A ++ + S+ R+R+ + Q+ + L + Sbjct: 75 AEGTMFLERSRRILAEIEATEQELSQASETPRGRLRVSMPQVT---RLVMPALAEFMALY 131 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + ++ I+ ++ + + +G + +P++ L Sbjct: 132 PQVELDL---DFSDRMVDIVGEGFDVVMRG--GQPVDSRLSAKFLGHFQHRLVASPEY-L 185 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-------ILVPDFNTKCQCQ 235 P+ L + + ++ + E ++ T+ Sbjct: 186 RERGTPLHPRDLAAHTCLHYRFPSNGKLETWPLRQEHPEQAYDIPISMVCNHVETRVCFA 245 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAP 294 + GI LPD+ V + LV+ + L + Sbjct: 246 LNHRGITCLPDFNVGRELANGSLVSVLDDFMERRGSFYLLWPSGRQMPPKLRVFIDFMLA 305 Query: 295 N 295 Sbjct: 306 R 306 >UniRef50_B8DKN9 Transcriptional regulator, LysR family n=4 Tax=Proteobacteria RepID=B8DKN9_DESVM Length = 699 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 57/279 (20%), Positives = 104/279 (37%), Gaps = 8/279 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F AR SF +AA EL S +S I +ET L V LF R R + LTE+ Sbjct: 1 MELRDLRTFAAVARLLSFHRAAAELNAAQSTVSARIAALETELGVRLFERLGRRVALTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + A L++ + + S+ + + + + + L ++ +++ P Sbjct: 61 GERLVQYAAKLIDVEDEARAWVTGESR-LRGLLTVRVPESLCA-YRLPPVIAAFRRRHPE 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + +T NG+ + ++A D+ + GG ++ +G AP HPLA Sbjct: 119 VALHLTACTLNGLEKDLRQGITDLAFVMADS-VRGGDLNVEALGVEPLVLVAAPHHPLAA 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 +A L ++ L + + + C G G Sbjct: 178 RDRVVA-RDLHGITLVLSTTDCAYRTVIEEALAAEGIQPAAGLEFSSASALRGCVASGVG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS 279 I LP+ VR+ + L + ++ +L+ Sbjct: 237 ITLLPEAAVRDELRAGTLRALAWADQPFETAVLMVRHRG 275 >UniRef50_Q0BTZ4 Transcriptional regulators, LysR family n=1 Tax=Granulibacter bethesdensis CGDNIH1 RepID=Q0BTZ4_GRABC Length = 316 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 61/312 (19%), Positives = 102/312 (32%), Gaps = 19/312 (6%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F FGSFS+AA G+ SAIS I +E L V LF RSTR + LTE Sbjct: 1 MDMLATMQMFVRVVEFGSFSRAAGVTGVHISAISRGIASLEENLGVDLFHRSTRRVHLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR F++ A +L + + + +R+ + + H + +P Sbjct: 61 PGRIFYQHARSVLREVEEARAAASAQQGHPQGLLRLALPDA-FARLHIVPHMPEFLATYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ ++ V +I A+ AI L + ++ R +PD+ L Sbjct: 120 DIRLD---MSFSDVRVDLIATGADAAIRI--GPLLDSSLIARKLAPHRRVICASPDY-LD 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P L + ++ H + + SI D C + Sbjct: 174 HRPAIRHPEDLVQHNCLIYSLQPSGNWFFHHPISGEEVAVPVRGSIRADDSEPLRGCALS 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHN-----PRQDSRMLLATQHSATGQVTQWIKKQF 292 G GI LP ++V + L + L H + Sbjct: 234 GLGIVLLPTWLVGNDLRSGRLSPVLPDWNAMIATQPSGIFGLYPPHRQVPPKIRAFLDFL 293 Query: 293 APNGILTGIYQD 304 Y + Sbjct: 294 Q-TRFGRPPYWE 304 >UniRef50_A4XVX3 Transcriptional regulator, LysR family n=8 Tax=Pseudomonas aeruginosa group RepID=A4XVX3_PSEMY Length = 306 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 111/297 (37%), Gaps = 8/297 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ L FT SF++AA LG+ S +S I +E L V L R+TR + LTE Sbjct: 1 MGLDDALIFTRVVECHSFTQAATSLGMQKSTVSRRIALLEERLGVRLLNRTTRKLRLTEV 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ ++ + ++ DF ++ + + + +RI + + + R+L +Q+P Sbjct: 61 GQAYYERCRQIMLDFAEAEQAVMQLQREPSGLLRIT-SPIEFGQLFLGRVLGEFMRQYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 V E+ + D + +IAI + ++ +P + LA Sbjct: 120 IDAEV--ELTSRSVDPLEEG-VDIAIQV--GQPQDSTLIARKLFESGRRLCASPAY-LAA 173 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 P + ++L + I+++ A +G L Q + + + + G GI L Sbjct: 174 HGTPRSVAELEGHRAILLQHDAPRYWPLLGEHLPCQRVMTCNNITFAREATLAGAGISGL 233 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFAPNGILTG 300 P + EA+ LV + + + +T Sbjct: 234 PVMISEEAVRSGRLVELLPEARLPVGEVYAIYPSRRFQAMKVKTFLDFLIASLPITR 290 >UniRef50_Q67KY5 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67KY5_SYMTH Length = 298 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 57/294 (19%), Positives = 113/294 (38%), Gaps = 8/294 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L + SFSKAA ++ A+S +K ME L RS + I TE+ Sbjct: 1 MLLSYLRVYCDIIETRSFSKAAARNFISQPAVSQQVKAMEEHFQQRLIERSPQGIYPTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F+ A +++ + A+++++ +SQ + +R+ + ++ + +P Sbjct: 61 GRIFYEAAREIVERYQALEQQMANLSQSVSGTIRVATVYTV-GLHDLPPYIKKFIQTYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + N +++A+ NQ +I I A +G + + + ++P+HPLA Sbjct: 120 ARIHLEYSRTNKIYEAVRQNQVDIGIVAYPQ--EGRQLGVIPLPSDELVVIVSPNHPLAR 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 +P+A QL P I + T L + + + T + G Sbjct: 178 AGKPVALQQLHRLPFIAFDPDIPTRKATDRVLNDHGVDVEIIHEFDNVETIKRSVEAELG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFA 293 + +P + + LV I + R + + + + Q Sbjct: 238 VSIIPRRCAQWEVRSGSLVALPIADMRIERPVGVIYKRGKNFSNTLQKFIAILT 291 >UniRef50_A3X5F2 Probable transcriptional regulator n=1 Tax=Roseobacter sp. MED193 RepID=A3X5F2_9RHOB Length = 299 Score = 241 bits (615), Expect = 3e-62, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 104/298 (34%), Gaps = 15/298 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F A GSFS A T SA+S I R+E L+ L R+TR ELTE Sbjct: 1 MEDLNLLRLFVLVADQGSFSAVARSTRATPSAVSRQISRLEENLNTRLLQRTTRRQELTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ + A ++ D ++ + +S +RI L + +L +++P Sbjct: 61 AGQVYLSHARQIIEDVDTARQAVSRLSNAPSGVLRITAEADL-ALTLLSPVLPEFLERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + T + +++ ++AI L + + R +P++ L Sbjct: 120 DLRVQLHTSST---MEDLVSRGIDVAIRV--GHLSDSSLIAKRLTMSRSLLVASPEY-LE 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P LR + + + T + + + I + G Sbjct: 174 QDIPPQQPEDLRNHSCLSFKVDTDLVTWRFKSGEEVTNVPVTGPIQASSLVLLKEAAKSG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIH---NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 GI LP +M+R + LV +P + + + A Sbjct: 234 LGIAMLPVWMLRAELKSGTLVPVLPGFPLDPAATPISAVYPSGRNLASKVRVLIDFLA 291 >UniRef50_Q0EX23 Transcriptional Regulator, LysR family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EX23_9PROT Length = 303 Score = 240 bits (614), Expect = 4e-62, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 102/297 (34%), Gaps = 10/297 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T + L F ARFGSF++AAE + LT AIS +KR+E L LF + + I LT +G Sbjct: 5 TLQQLRLFEAVARFGSFTRAAEAIHLTQPAISIQVKRLEETLGAPLFEQMGKKIYLTAAG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + + + + + ++D + + + + L +++P Sbjct: 65 KELYATCRHVFDSLGTFEGKLDELRGEVAGPLNLAAVTT--AKYFLPHYLGAFLRRYPKV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + + + + N+ +I I A L + I+ P HPLA Sbjct: 123 LPQLKVSNRARITERMEANEDDIYILAT--LPERIDIEVHPFLKDELVVFAHPKHPLANK 180 Query: 186 PEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + I L I E + + + + + Q + G GI Sbjct: 181 KK-IPPELLLGERIISREAGSGIRMTFERLLAERGVTLEPYMELGSGEAIKQAVMSGIGI 239 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 L + ++ + LV + P + + + + + I Sbjct: 240 ATLSTFSLKLELETGRLVVLDVEGMPIRRNWYAVHRRGKHLTPSALKFIEFLQTADI 296 >UniRef50_Q3J9W4 Transcriptional regulatory protein, LysR family n=6 Tax=Proteobacteria RepID=Q3J9W4_NITOC Length = 307 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 14/307 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F GSFS+AA + + SA+S + ++E L L RSTR + LTE Sbjct: 1 MQDLNLMAIFARVVEAGSFSEAARRMETSRSAVSKAVAKLEKNLGARLLNRSTRHLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 SG A +L + ++ + ++ +R+ + + + H A L ++P Sbjct: 61 SGAALVEYAARILEEAEQAEQVVSSLHAEPRGMLRVSAS-VAFGTLHIAPALADFVARYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +I + + ++ I + ++ + P++ Sbjct: 120 DIKIDMAI---TDRPVDLAEEGYDMIIRVTGE--PDLNLVARKLAPVYRKLCATPEY-FQ 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT-----AHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L + + + H + + + + D + Q G Sbjct: 174 QHGIPQIPEDLVNHDCLDYTLSGEQGYWHFTGPEGEIAVPVSGPLRINDDDALAQAVRGG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 GI LP + V + + + L P + L + Sbjct: 234 LGIALLPTFTVGKDLQEGRLQAVLSEYLPVKRYVYALYLPTRHLAAKIRVFIDFLL-TRF 292 Query: 298 LTGIYQD 304 D Sbjct: 293 GPEPDWD 299 >UniRef50_A0NTX9 LysR family transcriptional regulatory protein n=3 Tax=Proteobacteria RepID=A0NTX9_9RHOB Length = 342 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 49/293 (16%), Positives = 108/293 (36%), Gaps = 14/293 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 +L F A +FGSFS AA+ LG++ A+S ++ +E L + L R+TR + LTE+G Sbjct: 19 LSSLSGFVQAVKFGSFSAAAKHLGISQPAVSQQVRALEDELGIRLLNRTTRQLSLTEAGE 78 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 ++ A D+L R + + + + + + L + + L K P Sbjct: 79 RYYAYARDILERLAEADRSVQSEEAQMSGPLSVGLP-LGFAETVLSDFLIRFKLDHPGI- 136 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + + + +I + ++AI D ++ + +G + +PD+ L Sbjct: 137 --LLDVSLSDQFVDVIQQRLDVAIRMGD--IEDDRLIVRRLGLAQRCLVASPDY-LDKRG 191 Query: 187 EPIAESQLRLYPNIMVEDTAHTI------NKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P L+ + ++ ++ + + ++LV + +T + + G G Sbjct: 192 RPAHPDDLKDHDYLLYKNISTGTRVPFISPVGEKLSVKISPTMLVNNSSTLRRAAMAGLG 251 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQF 292 I +++ + L + + + Sbjct: 252 IALSNRWLIDPFLRTGDLEVVLPQWQYPPHPVHAVYPSNRFIPLKVRRFVDSL 304 >UniRef50_A9FHS9 Transcriptional regulator, LysR family n=2 Tax=Myxococcales RepID=A9FHS9_SORC5 Length = 309 Score = 240 bits (613), Expect = 5e-62, Method: Composition-based stats. Identities = 74/301 (24%), Positives = 126/301 (41%), Gaps = 12/301 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ T E L F A GSFS AA +L SA+S+ + +E+ L + L+ RSTR Sbjct: 1 MHDSITLEQLRTFIAVADEGSFSAAARKLRRVQSAVSHAMANLESQLGIALWDRSTRIPA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE GR A + D A+ ++ G++ V +C++ + L + Sbjct: 61 LTEHGRVLLGAARRVCADADALSSAAQRLAGGLDPLVSLCVDAIFPLSALV-DLCVEFAR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +PT ++ V TE V D +++ + + P G++ + ++R + H Sbjct: 120 AYPTVELVVHTETMAAVADRVLDGTCQLGVVGPAATAQ--GLERQHLTSVRMVAVVGEAH 177 Query: 181 PLAF---VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 PLA +A QLR + I++ + + + L + V D TK + Sbjct: 178 PLAAAAPRGARVATEQLREHVQIVLSERGGARSPEQAVL--SPRTWRVVDLETKRELLCA 235 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML----LATQHSATGQVTQWIKKQFA 293 G G G LP++M+R+ + LV D +L + G QW+ K+ Sbjct: 236 GLGWGNLPEHMIRDDLNAGRLVRIWPAAWGDDEHVLPLAVVHRPGLVQGPAGQWMLKRLV 295 Query: 294 P 294 Sbjct: 296 E 296 >UniRef50_Q142A3 Transcriptional regulator, LysR family n=53 Tax=Burkholderia RepID=Q142A3_BURXL Length = 336 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 47/297 (15%), Positives = 100/297 (33%), Gaps = 12/297 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 +L+ F+ G FS A LG++ S +S + +E L V L RSTR + LTE+G Sbjct: 15 NLNDLMYFSQVVEHGGFSAAERVLGISKSRLSRRLTELEASLGVRLLQRSTRKLALTEAG 74 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + F++ +L++ A + + VR+ + + + +++L ++P Sbjct: 75 QLFYQHCQAMLSEAQAAVNVVQQLRSSPRGTVRVSVPVTI-SQTILSQILPEFMHRYPEV 133 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + + + ++A+ + I + + AP L Sbjct: 134 RVVMRVTN---RVIDLFEDSVDVALRVRSDPPENANIVVRPLWRTQQMLVGAPS-LLQQN 189 Query: 186 PEPIAESQLRLYPNIMVEDTAHTI------NKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P+ + L + + V + ++ D T + + G Sbjct: 190 APPLLPADLNRFETLDVPTGDGRHVYNLIAPDGTRHAHEHEPRLVTADLMTIREAVLAGV 249 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAPN 295 GI LP+ M A+ L ++ + + Sbjct: 250 GIAALPEMMYGAALRAGQLSPVMPGWTFPTPQLYAVFVSRQGMVPAVRAFVDYLVEM 306 >UniRef50_C5CU34 Transcriptional regulator, LysR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CU34_VARPS Length = 341 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 66/305 (21%), Positives = 113/305 (37%), Gaps = 13/305 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M I T + F A GSF A L SA+S+ I +E L V LF RS Sbjct: 1 MLDILTLSQMQMFVAVADAGSFRAGAARLHRVQSAVSHAIANLEEQLQVRLFDRSGHKPV 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +G+ +L+ A++ R + QGIE + + ++ L+ P A L+ + Sbjct: 61 LTPTGKALLGDVRVILSKVEALRSRAQGLEQGIELGLAVAVD-TLFPPNLLASALRGMHA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P+ I V G DA+ + + ++AI A I + + AP H Sbjct: 120 VYPSIAIRVEYSSMGGTVDALNSGRCDLAIAAFGH--ADEKISREFLMQLHTVAVAAPSH 177 Query: 181 PLA----FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQI 236 LA ++ + I+VED + T+++ + + V D K Sbjct: 178 ALAVHAGRRGAGGLDAAAAEHVQIVVEDPS-TLSQGYDIDVLSPSTWRVTDMYIKLALLR 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQ----DSRMLLATQ-HSATGQVTQWIKKQ 291 G G G +P ++V + LV + + + G +++ Sbjct: 237 AGLGWGKMPSWLVAGDLAAGTLVQLPVSRIGPGGGTSQQCHFCHRGDKTLGAGATLLREC 296 Query: 292 FAPNG 296 Sbjct: 297 LMGEA 301 >UniRef50_A9KVN3 Transcriptional regulator, LysR family n=11 Tax=Shewanella RepID=A9KVN3_SHEB9 Length = 300 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 74/294 (25%), Positives = 130/294 (44%), Gaps = 6/294 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + LL F T A GS A+++L T AIS +IK++E+ LD++LF R + +TE Sbjct: 1 MTLDQLLMFKTVAEAGSLKAASDKLHKTQPAISQSIKQLESQLDLILFNREGYRLAITEQ 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +LN+ +K+ +++G EA + + + +L++ + +FP Sbjct: 61 GRKLLQHTQRVLNEAQEMKQVAKHLAKGNEASITLAFEASFNLARILP-ILELTQNEFPY 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPD-TLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 QI + E G +A+ ++A I I A + ++ + + AP L Sbjct: 120 TQIILKQEFLTGALEALNQDKAEIIISAGGIEPIRSSHLELAYLFSGSLLDVAAPR-MLE 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 P +L I+++DT + GQ V DF TK G G G Sbjct: 179 RHPTLSYARELVNEYQIVIQDTGSGTANIEFGVQAGQRRWYVNDFYTKKMLIQSGMGWGK 238 Query: 244 LPDYMVREAMTQSLLVTRQIHNPR---QDSRMLLATQHSATGQVTQWIKKQFAP 294 LP YM+ +++ Q +L+ + + Q ++ HS G V Q + ++ Sbjct: 239 LPHYMIEDSLKQGVLIALDLRERQNNIQLDYYVMRKPHSPLGPVAQALWQKLIA 292 >UniRef50_A0KF63 Transcriptional regulators, LysR family n=1 Tax=Aeromonas hydrophila subsp. hydrophila ATCC 7966 RepID=A0KF63_AERHH Length = 300 Score = 240 bits (613), Expect = 6e-62, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 101/299 (33%), Gaps = 13/299 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L GSF+ AA+ELG+T + +S I +E L V L RSTR + LTE+ Sbjct: 1 MDLNAALILVRIVDKGSFTAAAQELGMTKATVSRRIAELEQRLGVRLLYRSTRQLTLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G ++ + + +++ + + Q + +++ + + RL+ + +P Sbjct: 61 GEQYYLRCSKAVDELAQAELMVSASQQEVTGTLKLAVP-IEAGQLVVGRLVAEFLQAYPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + E+ N + D I + + D + + + + +P + LA Sbjct: 120 LQVEL--ELTNRIVDPINEG-LDAIVRIGD--MSDSNLAARRLWSNARLICASPAY-LAR 173 Query: 185 VPEPIAESQLRLYPNIMVEDT-----AHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P L + + V L+ V + + G Sbjct: 174 SPAITHPEDLVHHERVAVTSGFLASHWCFERDDKEVLVDPPSRFRVNNITCAREAAKAGL 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNGI 297 G+ LP + E + LV+ + + L + G Sbjct: 234 GLASLPAMLCHEELASGTLVSVLPEWQQPRVPIYLLFPERRLMPRKLRVFIDFIVAKGA 292 >UniRef50_C6D9I6 Transcriptional regulator, LysR family n=3 Tax=Gammaproteobacteria RepID=C6D9I6_PECCP Length = 310 Score = 239 bits (612), Expect = 8e-62, Method: Composition-based stats. Identities = 63/309 (20%), Positives = 123/309 (39%), Gaps = 24/309 (7%) Query: 2 NSIFTEENL---LAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRS 58 +S+ T ++L AF T A+ GSF+ AAE LGLT SA+ ++ R+E L + LF RSTR Sbjct: 6 SSMRTTDHLGGINAFVTTAQQGSFTAAAERLGLTKSAVGKSVSRLEDRLGLKLFQRSTRR 65 Query: 59 IELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVL 118 + LT G F ++ + + + R+R+ + + LL + Sbjct: 66 LSLTPDGERFLASCQSAMDILEQAEAELTSHLCQPAGRLRVDLPAAFGRQRILPILLN-I 124 Query: 119 KKQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178 +++P +TVT ++ + I + ++ I + L D G+ + + +P Sbjct: 125 TRRYPELALTVT---FSERFVDPIEDGIDLVIRIGE-LADSSGLVARRLTTQKLVICASP 180 Query: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL----------HGQESILVPDF 228 D+ L EP++ L + ++ N+ + WLL + D Sbjct: 181 DYLL-NQGEPVSVEALSQHHCVV----GFRRNQPISWLLKDDTGQIARYTPPATHEFADG 235 Query: 229 NTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQW 287 + + G G+ LP ++V + + L + + + + L + + Sbjct: 236 DAMLAAVLAGCGLSQLPRWLVGKYLESGELKEVLVSHAGGEMPISALWPKSRQLLPKIRH 295 Query: 288 IKKQFAPNG 296 + Sbjct: 296 VVDTLVKAA 304 >UniRef50_C5S803 Transcriptional regulator, LysR family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S803_CHRVI Length = 305 Score = 239 bits (611), Expect = 9e-62, Method: Composition-based stats. Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 8/301 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T E GSF AAE L T S++SY +KR++ L V + R LTESG Sbjct: 9 TLEQWALLDALDERGSFEAAAESLNRTQSSVSYGLKRLQEQLPVTVLEPQGRRTVLTESG 68 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R ++A LL++F ++R T+ QG E VR+ + ++ L +Q P Sbjct: 69 RLLLQRARVLLHEFKRLERLAATLGQGWETTVRLAVEIVMPLEPLL-EALARFTEQAPQT 127 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 Q+ + V +G +A++ +Q ++AI L G + + + DHPL + Sbjct: 128 QVQLVETVLSGTGEALVRHQVDLAITG----LIPPGFIGDPLLRVDFVAVARHDHPLHRL 183 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + LR + +++ DT H GW L +E V T G ++P Sbjct: 184 GRVLTLDDLRAHRQVVIRDTGHWRPVDSGW-LEAEERWTVSHLRTAIALIERGLAFAWIP 242 Query: 246 DYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 + +R + + L + R ++ L+ +A G T+ + Sbjct: 243 ESSIRAELARGELRPLPLESGGHRPETLYLVLADPTAAGPATRALGVCLRERAQAFQSMG 302 Query: 304 D 304 Sbjct: 303 Q 303 >UniRef50_B5JQV8 LysR substrate binding domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQV8_9BACT Length = 300 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 55/295 (18%), Positives = 115/295 (38%), Gaps = 9/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A G+F++AAE+ ++ ++S I ++E L LF R R ELT + Sbjct: 1 MELHQLRYFLAVAEAGNFTRAAEKCFVSQPSLSAQIIKLEGELGQKLFNRLGRRAELTRA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + +A +L + +R+I + I V++ + + TP ++++ ++++P Sbjct: 61 GTFLESRARTILMEVENAERQIKENEEDIRGIVKVGVTPSV-TPYLIPPVIRMCRERYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + + + D + +AI + D ID I A++ H LA Sbjct: 120 LEINIQENLRRRLIDEVQQGHLEVAISSYTG--DAANIDAEPILQEDLVLAVSKTHRLAT 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 ++ + P +++ ++A +K + + + L + + LG G Sbjct: 178 QKSKVSIEDFKDEPLVLLGESATLGDKVFDFFDKMNIEPKVVALCSQVRSVKEMVNLGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAP 294 + LP E + +V R + + R + T + Sbjct: 238 VAILPAMAKEEHLPF-EIVYRSLVSERMKRLLFALTHSRRYLSPGARVFVDLIRE 291 >UniRef50_Q67SW7 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67SW7_SYMTH Length = 305 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 110/297 (37%), Gaps = 9/297 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L AF A+ GSF++AAE L LT +++ I+ +E L LF R R + LT++ Sbjct: 1 MDVQGLEAFWWIAKTGSFNRAAERLFLTQPSVTARIQALEKELGQQLFERRPRGVRLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A +L D ++ + + + + + L + +L K+ +P Sbjct: 61 GRALLPHAERVLQDIKRARQAVLDLQTASGGTLSVG-SALTTSAYLLPDILLRFKRGYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V T + V ++++ + + L I + + PDHP+A Sbjct: 120 VEVLVHTGRSHQVQQLVLDDTVQVGLVHAP-LPSHAEIVSYPLSEEPILLVVPPDHPVAR 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGW----LLHGQESILVPDFNTKCQCQILGEG 240 E + +L I + + W ++ + + + G G Sbjct: 179 HSE-VTLDELTQESFITTDRASGYWALVEQWWASQGFVPHITMELDSIEAAKRMVLCGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 + LP V+ + S +V + N + +L+ + + + Sbjct: 238 LTMLPYSTVKSEIELSQVVAVPLANSATLKRQNILIHRRGKIWSGTAKAFLRVLEEM 294 >UniRef50_B1Y5W5 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B1Y5W5_LEPCP Length = 316 Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats. Identities = 58/297 (19%), Positives = 106/297 (35%), Gaps = 11/297 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L FT AR SF +AAE L LT A++ +K +E+ +++ LF R R + LT +G Sbjct: 5 TFRQLRVFTEVARHLSFVRAAEALHLTPPAVTMQVKELESAIELPLFDREGRKVSLTTAG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 YF A LL+ + + + + + +LL + + P Sbjct: 65 EYFLVYAKRLLSTLKEADDAMARFRKVESGVLSVGMVGT--AKYFVPQLLARFRIEHPGI 122 Query: 126 QITVTTE-VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + + + ++AI A F P HP+ Sbjct: 123 ELKLQVGANREQLVALLQQGEVDLAIMGRP--PREMATRAEPFAAHPHVFIAPPGHPVLA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG----QESILVPDFNTKCQCQILGEG 240 S+L YP I E + T + + ++ +P T Q + G G Sbjct: 181 QGRT-TLSELASYPLIAREPASGTRALMDRFFQEHRVELRIAMEMPSNETIKQAVMAGMG 239 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAPNG 296 + FL + + + LL + N ++ Q + ++ +G Sbjct: 240 LSFLSLHTIGLELRCGLLELVHVENAPIVRTWNIVHMQSRLLSPAAEALRYFMLEHG 296 >UniRef50_B7H4B0 LysR substrate binding domain protein n=10 Tax=Gammaproteobacteria RepID=B7H4B0_ACIB3 Length = 303 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 109/297 (36%), Gaps = 13/297 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 + F T GSF KAAE+L LT SAIS I R+E L V LF R+TRS+ +T+ G Sbjct: 4 ELSAISIFVTVVEAGSFVKAAEQLHLTRSAISKNIARLEDQLGVALFKRTTRSLSMTDEG 63 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 F+ + L++ +D R+R+ + +L+ A L+ +Q Sbjct: 64 ALFYEHSRRALSEIQNAAALLDQRKINATGRLRMSVP-VLFGQLFAAPLMVKFAQQHADL 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 Q+ ++ +N +I ++ I L D + IG R +PD+ L Sbjct: 123 QLEIS---FNDRNVDLIEEGFDLCIRIG-ALPDTTQLVAKPIGEHRMLLCASPDY-LNKA 177 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKK------VGWLLHGQESILVPDFNTKCQCQILGE 239 L + I + + + +L+ D + Sbjct: 178 GPVEHIEDLDQHATIADPHFGQMQKWRLQKENDEPLFIKPKAKLLLNDLQAIKNAALADA 237 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPN 295 GI +LPD++++ + LV + L T+ A + Sbjct: 238 GIAWLPDWLIQNELQDGKLVQVLDAMSSTAFPIHLVWPTLPFMPLKTRLAIDYLAQH 294 >UniRef50_A9WIA6 LysR substrate-binding n=4 Tax=Chloroflexaceae RepID=A9WIA6_CHLAA Length = 307 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 96/290 (33%), Gaps = 8/290 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L + GSF+KAAE L ++ SA+S ++ +E L L R R + T + Sbjct: 17 LNLHLLRIYVAVLEQGSFTKAAEVLTMSQSAVSRAVQELERQLGTTLLERRARGVAPTMA 76 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A + ++ + R+ I + + LL +++P Sbjct: 77 GTILGEHARRIFTHERLAIEALNELRGLQRGRLAIGASSTI-GIYLLPPLLGNYHRRYPG 135 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + + +++ Q ++A + + + +PDHPL Sbjct: 136 IELFLDIGNTQQIIERLLSYQIDVAYVEGP-VAANEDLQVVPWRSDEMVVIASPDHPLTR 194 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + S L+ P IM E + T L + + + + Q G G Sbjct: 195 R-VTLDCSDLQDAPFIMREPGSGTRKVMEQALAAHNVTVRPVMELGSTEAVKQAVSAGLG 253 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIK 289 + + + ++ + L I ++ + + Sbjct: 254 LSMVSRFTIQSELIAGKLRVLNIPGLNIQRQLSRVRLHDRPQSLALEAWF 303 >UniRef50_B7RU53 LysR substrate binding domain protein n=2 Tax=unclassified Gammaproteobacteria (miscellaneous) RepID=B7RU53_9GAMM Length = 297 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 57/290 (19%), Positives = 107/290 (36%), Gaps = 10/290 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +NL AF A GSFS+AAE+L LT A+S + +E L LF R R I LTE+ Sbjct: 1 MDTQNLKAFILVAETGSFSQAAEKLHLTQPAVSKRVALLEEQLGTELFDRIGRIISLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +A + A ++ + ++ + ++R+ + + +L + FP Sbjct: 61 GKALLPQAKSVERALDAAEQSVRDLAGDVAGQLRLATSHHI-GLHRLPPVLSSFSQTFPE 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I + ++ I + +A+ + + + F IA DH L Sbjct: 120 VHIDIDFMDSEQAYELISQGKVELAVVTL-APKEQTNVISLPVWQDPLDFMIAKDHELLR 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 + +P I+ +T L + S+ T +G G Sbjct: 179 SGNTPDLQAMSRHPAILPGLNTYTGQIIKRLFDSHGLQLEVSLATNYLETIRMMASVGLG 238 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 LP M E++ + + I + L+ + + + + + Sbjct: 239 WTILPRSMRDESLATIDVASVAIE----RTLGLIYHRGRSLSRAAKAFIE 284 >UniRef50_B1JAA5 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas putida W619 RepID=B1JAA5_PSEPW Length = 296 Score = 239 bits (610), Expect = 1e-61, Method: Composition-based stats. Identities = 63/295 (21%), Positives = 120/295 (40%), Gaps = 9/295 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E L AF+ SFS AA +LG + SA+S ++ +E L + LF RS R +LT Sbjct: 2 RLSLEQLAAFSAVVSERSFSAAARKLGKSQSAVSISVGNLEIDLGITLFDRSQRYPQLTN 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR R A +L ++ R +++Q +E + I I++ + A +L+ ++FP Sbjct: 62 EGRALLRDAEAILGQCCNMESRASSLAQALETELVISIDEAIPYQS-LAPVLEEFSRRFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +TV V I + + +A+ T + + +G+I ++ + HPL Sbjct: 121 HVDLTVLHPCGQDVLTMIEDKKLLLAMMCTRTHYPR-NLQFIRLGSITFSNVVGRQHPLV 179 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 +P ++ +QL Y ++ + L+ V + T G G Sbjct: 180 AMPT-VSFNQLSNYRQLIYLPFQDRLPTSE--YLNSPNHWRVESYLTLMGMLRAGMGWAT 236 Query: 244 LPDYMVREAMTQSLLVTRQIHN----PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 +P +++ V Q+ L+ + G+ W+++ Sbjct: 237 VPRQLIQALGPNGEFVELQLEAYPYTDWTVGVDLVWSSGLRLGKAGTWLREALGR 291 >UniRef50_A6GS93 LysR-family transcriptional regulator n=4 Tax=Proteobacteria RepID=A6GS93_9BURK Length = 304 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 53/302 (17%), Positives = 101/302 (33%), Gaps = 16/302 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F FS AA LG+ S IS I +E L+ L RSTR + +TE Sbjct: 1 MDLNDLYYFAKVVEHQGFSAAARALGIPKSKISRRIAELEKRLNTQLLYRSTRKLHITEI 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +++ +L + + + I+ +R+ + H +L + P Sbjct: 61 GKTYYQHCKAMLIEAESAQEVIEHNHAEPRGLIRMTCP-IALLHAHIGDMLAEFLVKHPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + E N D + ++AI LD + + +P + Sbjct: 120 VTVHM--EASNRRVDVVAEG-VDLAIRVRPLPLDSSDLVLKVLSDRGLCLVASPC-LINK 175 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL----------HGQESILVPDFNTKCQC 234 + P L +P++ + T + W L ++ D Sbjct: 176 MGAPKHPKDLIHWPSLGLGQTQGQVQTAFEWCLTHASGERIVIPHSPRLVTTDMVALRAS 235 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFA 293 + G G+ LP+ MV + + LV PR++ ++ + + Sbjct: 236 AMAGVGVVQLPNLMVPKQVANGELVKLLPDWSPRREIIHVVFPSRRGMLPAVRALIDFLC 295 Query: 294 PN 295 Sbjct: 296 EK 297 >UniRef50_Q88D98 Transcriptional regulator, LysR family n=15 Tax=Pseudomonas RepID=Q88D98_PSEPK Length = 301 Score = 238 bits (609), Expect = 1e-61, Method: Composition-based stats. Identities = 64/297 (21%), Positives = 114/297 (38%), Gaps = 8/297 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTR-STRSI 59 M + E L F A SFS A E SAIS I +ET L V LF R S R Sbjct: 6 MAEQWNLEQLRTFLRVAELRSFSAVAREQHKAQSAISSAIALLETDLGVTLFERSSGRQP 65 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LTE+G A +LL + R + +G EA +R+ ++ + L L Sbjct: 66 KLTENGSALLEDARELLRQCERLDGRALALMRGQEALLRVAQDEAMPYQPVI-DSLDELA 124 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 ++P ++ + + V ++ +A++ + + ++ +G++ A Sbjct: 125 SRYPFLEVQLASGAQGDVARKLVERRADLGLFFLHESIPAS-LERRALGSVEMVTVCAVG 183 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + QL + +++ + F + + G Sbjct: 184 HPLAGEGR-VTRQQLARHRQLLITPQQSGYPGGEAI---SPQVWRADSFYAMAELLMRGL 239 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQVTQWIKKQFAPN 295 G +LP ++V+ Q+ +V LA + G QW+ ++FA + Sbjct: 240 GWAWLPRHVVQYPTYQAHMVELDSDWRPPALVAELAWRRDEPLGPAAQWLAERFAVH 296 >UniRef50_C6D9Q6 Transcriptional regulator, LysR family n=9 Tax=Enterobacteriaceae RepID=C6D9Q6_PECCP Length = 297 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 65/302 (21%), Positives = 107/302 (35%), Gaps = 9/302 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 ++ E+LLAF T GSFS AA L + S IS I +E L + LF RS LT Sbjct: 2 RYSPESLLAFVTTVDAGSFSAAARRLHKSQSTISAAIANLEADLGLTLFDRSGHQPTLTL 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR +L+ + ++ IE R+ ++ + + +LQ +QFP Sbjct: 62 AGRKVLSHVQAILSASEDLDELAIRLADHIEPRLTFMLSDIWQAAHY-EPVLQRFAQQFP 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + V D + N+A++ I A ++ HPLA Sbjct: 121 DIEFECLIAEGDDVIDLLQMNRAHVGILRAQADYPPDVAAARLQVKTEMALFVSAAHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + SQL + + K+ L P + + G G Sbjct: 181 AEKT-VTRSQLATVRQLYL-----NTYKRSDQLQPEGIVWSAPSYLMLLEMAQQGHGWSM 234 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAPNGILTGIY 302 LP ++V + + LV + Q + + + G W+ T Y Sbjct: 235 LPRWLVAQY-DRKKLVELPVAGWPQWIDVDVVWSKPHPPGPAGLWMIDNLLAQQESTLHY 293 Query: 303 QD 304 D Sbjct: 294 GD 295 >UniRef50_B5ELK2 Transcriptional regulator, LysR family n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5ELK2_ACIF5 Length = 308 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 14/309 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A FS+AAE LG++ +S I +E L L R+ R + LT++ Sbjct: 3 LELRHLRYFIAVAEDLHFSRAAERLGISQPPLSQQIHTLEEMLGARLLVRTNRRVALTDA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F ++A +L + ++ +G + + I + + K R + + +FP+ Sbjct: 63 GEAFLKEARAILVQVDRAVDYVRSVERGEKGELHIGMTRSAMLAKQVPRAIFRFRTEFPS 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA- 183 + + DA+I+ + + I L + + A + HP Sbjct: 123 VHLGLEELNSLEQIDALIHEKIQVGIMRVQHLPAM--LQSHMLYADPLVAVLPAKHPFCP 180 Query: 184 ---FVPEPIAESQLRLYPNIMVEDTAHT------INKKVGWLLHGQESILVPDFNTKCQC 234 + P+ +QL I+ D+A T + + V + +T Sbjct: 181 ISPTLSVPLDPAQLVHEQFIIFADSAGTGIRNQFYQICHDAGFNPRIVQEVQEASTMIGL 240 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G GI LP + Q + + +P S + + + + + + Sbjct: 241 VAAGLGITILPVSY--SYLQQDSVCYIPLSSPSARSDIHVVYRCRDHSPLLRQLLTILKS 298 Query: 295 NGILTGIYQ 303 + + Sbjct: 299 EAAAHAVSR 307 >UniRef50_Q1GXZ2 Transcriptional regulator, LysR family n=1 Tax=Methylobacillus flagellatus KT RepID=Q1GXZ2_METFK Length = 291 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 50/293 (17%), Positives = 105/293 (35%), Gaps = 9/293 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E + + + G+F+ AA LG++ +S + +E L L R+TR + TE Sbjct: 1 MSPLEQMRIYAEVVKHGNFTAAARHLGISKQLVSRRVMELEERLGARLLQRTTRKLSPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR FF + +L + ++ + + + + +R+ + + + L + P Sbjct: 61 LGRVFFTRCQTILQEIDEAEQEVASSTGELRGLLRLSAP-VSFASMVLSPALNRFMQLHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + ++ ++AI G+ ++ A+ +P + LA Sbjct: 120 NLEVALDVDN---RVVDLVGEGYDMAIRITKQ--PDEGLIARKLADSALAYCCSPSY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 P + QL + I + + L + C+ I G GI Sbjct: 174 QHGAPQSPMQLGRHRCITSKAGEWLFEDAGELLKLQVHPVLRSNHGEVMCEAAIAGLGIV 233 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWIKKQFAP 294 LP++ VR+A+ LV + L H + + Sbjct: 234 GLPEFYVRKALETGALVQVLQEYTADIGAVYALYPPHRQASLMVRSFADFLQE 286 >UniRef50_C8X032 Transcriptional regulator, LysR family n=1 Tax=Desulfohalobium retbaense DSM 5692 RepID=C8X032_DESRD Length = 298 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 73/295 (24%), Positives = 133/295 (45%), Gaps = 9/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ + L F TAA+ GSFS+A +L SA+S ++ +E V LF RS + +ELT Sbjct: 4 YSLDQLECFVTAAKAGSFSEAGRQLNKAQSAVSTSVANLEIDFGVPLFDRSGKYLELTSE 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G R+A +L ++ R + +E RVR+ I++ L +P +L QFP Sbjct: 64 GEVLLREAETILYRCARLQNRALAFAADVETRVRVAIDEALRSP--LLEVLPEFAAQFPA 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V+ ++ V A+ A+I + + + + Y +G I + A+A HPLA Sbjct: 122 TEMDVSEGLFTDVHRAVALGHADIGLLIGTGIPE-PTVKYKLLGYIPFQAAVAAHHPLAA 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +A S L I++ + ++ + + + G G FL Sbjct: 181 KKQ-VAVSDLEDERQIIITSRGEQRHSEITPF--SHRLWVAESYASGLGMIRKGVGWAFL 237 Query: 245 PDYMVREAMTQSLLVT--RQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFAPNG 296 P+ ++++A +V ++ + S + L + GQ QW+ + FA G Sbjct: 238 PEPVLQDATGDGSIVALSLELEHRVHTSPLYLLWKRDDVVGQAGQWLFEMFAEMG 292 >UniRef50_A9ACH3 Transcriptional regulator, LysR family n=16 Tax=Proteobacteria RepID=A9ACH3_BURM1 Length = 310 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 104/291 (35%), Gaps = 13/291 (4%) Query: 13 FTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFRKA 72 F A G F+ AAE L LT SA+S ++ R+E L VVLF R+TR + LT++GR F+ Sbjct: 21 FVCVADAGGFTAAAERLNLTNSAVSKSVARLERRLGVVLFERTTRKLVLTDAGRAFYETC 80 Query: 73 TDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVTTE 132 T +L + + + + VRI + + +L +Q+P + + Sbjct: 81 TRILAELAEAEAVLAAQQREPVGTVRIALPAS-FGRLCVVPVLVRFSEQYPDVRPHLL-- 137 Query: 133 VYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIAES 192 + + + ++A+ + +G R F AP + L P Sbjct: 138 -FTDRFVDLAEEGIDLAVRIGGPPGLPPSLGRRFLGRERLIFCAAPAY-LEKNGIPQTVD 195 Query: 193 QLRLYPNIMVEDTAHTINKKVGWLLHGQ-------ESILVPDFNTKCQCQILGEGIGFLP 245 L+ + I+ + GQ I+ D + G G+ L Sbjct: 196 DLQEHACIVYGRPDGAQSLWSYAAADGQVEQRVVRPRIVAGDAEAQLAFVRAGLGVAQLA 255 Query: 246 DYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 ++VR+ + LV + L + + + Sbjct: 256 TWLVRDDLKAGRLVAILDEAATDGLPLSLIWPVARQLTPKIHVLVQTLEAH 306 >UniRef50_C7QF45 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QF45_CATAD Length = 307 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 97/296 (32%), Gaps = 16/296 (5%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + L F T G FS AA++L ++ ++S ++ +E L L RS I T Sbjct: 2 TQLNLHRLSIFLTVVETGGFSAAAQKLYMSQPSVSNHVRNLEQSLQTTLIDRSGPRIRPT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 G A + I +S R+ + RLL +++ Sbjct: 62 AEGEVLAEYARRIFLLTEEAVAAIREVSGVQSGRLEVG-GTTTVGTYLLPRLLARFRERH 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 + + + +++ + +AI A + + R AP HPL Sbjct: 121 QNIECDIVVGNNGQILKRLLDGELGLAIVA--GQPAAPQLKTETVLDERLLLVAAPGHPL 178 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDF--------NTKCQC 234 I QL ++ E + T + + L++ + D T Q Sbjct: 179 THPTPHITAPQLAGERFLLREPGSQTRDLQEAALIN----WDLDDMPKADMWGPETIKQS 234 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIK 289 G GI + ++ + + L ++ P + +++A + + Sbjct: 235 VAAGLGISLISEHAIDTEVKDGRLAVLEVDPPLRSRPVVIAYRRDRLLSPAERAFV 290 >UniRef50_B1Y0I3 Transcriptional regulator, LysR family n=6 Tax=Burkholderiales RepID=B1Y0I3_LEPCP Length = 332 Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats. Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 21/320 (6%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L T AR GSF+ AA ELG SA++Y+++++E LD +LF R +R +LT + Sbjct: 8 LTPEALEMMDTIARTGSFAAAARELGKVPSALTYSVRQLEEALDALLFDRRSRQAQLTPA 67 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK----- 119 G R+ LL + R+ ++ G E + I ++ ++ P L+ Sbjct: 68 GDELLREGRRLLQQIDTVANRVQRVANGWETELAIAVDNIV-APAALFDLIDAFFTLPSG 126 Query: 120 --------------KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYT 165 + P ++ + EV G W+A++ QA++AIG I Sbjct: 127 VGDDTVATGQTASGHRGPPTRLKLLDEVMAGTWEALVTGQADLAIGVTLPGAAFEDIQTA 186 Query: 166 EIGAIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILV 225 +G +R A+AP HPLA P+ + + + + D+A + + GQ+ + V Sbjct: 187 VLGPLRMVMAVAPHHPLAREAAPLCSDTIARHRIVAIADSAKRHDPITVGVQAGQDVLTV 246 Query: 226 PDFNTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQV 284 P K + Q+ G G G LP+ +VR LV + P ++ + A + S A G+ Sbjct: 247 PSVAAKLEAQLRGLGCGRLPENLVRRHAEAGRLVVLETEEPPREIELHYAWRRSAAQGRA 306 Query: 285 TQWIKKQFAPNGILTGIYQD 304 W Q + + Sbjct: 307 LGWWLSQLESVTTRRALMEQ 326 >UniRef50_A4XTW7 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XTW7_PSEMY Length = 309 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 47/288 (16%), Positives = 101/288 (35%), Gaps = 12/288 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F A S ++AA L L ++S + ++E L + LF + + + LT++G Sbjct: 12 TFRQLETFLAVAEHLSVTEAARTLHLAQPSVSTQLAKLEQALQMELFEQLGKRLYLTDAG 71 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 R A ++ + ++ R+ ++ ++R+ RLL +Q+P Sbjct: 72 REVQAGAREIFDALDRLEMRLAQLNGLTTGQLRLGAVTT--AKYLVPRLLGPFCRQYPQV 129 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ + + V + +N+ ++ + D ++ + H L+ Sbjct: 130 EVQLNIANRSDVIRCLEDNRDDLYV--FSQPPDHLDLECVALAENPLVVIAPAGHRLS-- 185 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG----QESILVPDFNTKCQCQILGEGI 241 + I QL P + E + T + + + + G GI Sbjct: 186 GQRIRWEQLAQEPFLSREPGSGTRLAIEDHFARHGWPYKPHMTIASNEAIKESVAAGLGI 245 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWI 288 L + + LV + + P + L+ + A Q Sbjct: 246 AILSRHTLI-HTAVGNLVELDVEDFPIANQWYLVRWRRKALSPAAQAF 292 >UniRef50_A0P156 Transcriptional regulatory protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0P156_9RHOB Length = 305 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 54/297 (18%), Positives = 109/297 (36%), Gaps = 12/297 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +++ F GS S AA L ++ S +S I R+E L L R+TR I TE Sbjct: 1 MIDLDDMRCFVEVVDCGSLSAAATRLNISKSVVSRKIARIEDLLGTRLLDRTTRGIAPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G F ++ +L ++ I S I +R+ + L + +H +L L ++P Sbjct: 61 AGLEFKSRSERILLEYEETLEAISEHSNEIVGELRLSVP-LAFGTRHLGPVLASLACRYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ ++ +I + + I L +I I +P + L Sbjct: 120 RLKVD---ASFSDRVVDLIGERFDAVIRI--GHLRDSSYIARKIAPISSIVVASPTY-LE 173 Query: 184 FVPEPIAESQLRLYPNIMV----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P + L + ++ + + + + +T + G Sbjct: 174 RNGTPQSPEDLTAHDCLIYTAALSPDWVFQSGNRKISVRPSGRLRTDNGDTTVAWAVAGL 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAPN 295 GI P ++V EA+ + LV + P + + + + T + + + N Sbjct: 234 GIAHAPLFLVNEAVERGDLVPLLLDYPTPEVGLYVLRAPGANTPRKVRVLIDALVEN 290 >UniRef50_P42722 HTH-type transcriptional regulator cfxR n=9 Tax=Betaproteobacteria RepID=CFXR_RALEH Length = 317 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 100/298 (33%), Gaps = 10/298 (3%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T L F T AR SF +AAEEL LT A+S +K++E+ + + LF R + LT Sbjct: 6 RALTLRQLQIFVTVARHASFVRAAEELHLTQPAVSMQVKQLESVVGMALFERVKGQLTLT 65 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E G A+ +L + + + + + + I + + +LL Sbjct: 66 EPGDRLLHHASRILGEVKDAEEGLQAVKDVEQGSITIGLIST--SKYFAPKLLAGFTALH 123 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + + + + +N ++A+ I A +P HPL Sbjct: 124 PGVDLRIAEGNRETLLRLLQDNAIDLALMGRPPRELDA--VSEPIAAHPHVLVASPRHPL 181 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKV----GWLLHGQESILVPDFNTKCQCQILG 238 +LR ++ E + T L + I + T Q + G Sbjct: 182 HDAKG-FDLQELRHETFLLREPGSGTRTVAEYMFRDHLFTPAKVITLGSNETIKQAVMAG 240 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAPN 295 GI L + + + + + + +A ++ + + Sbjct: 241 MGISLLSLHTLGLELRTGEIGLLDVAGTPIERIWHVAHMSSKRLSPASESCRAYLLEH 298 >UniRef50_A4A494 Transcriptional regulator, LysR family protein n=2 Tax=Gammaproteobacteria RepID=A4A494_9GAMM Length = 310 Score = 238 bits (608), Expect = 2e-61, Method: Composition-based stats. Identities = 77/293 (26%), Positives = 126/293 (43%), Gaps = 4/293 (1%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 S T + L A R GSF+KAAEEL TSA+SYT++++E L V LF R R LT Sbjct: 14 SPITLDALQALDAIDRRGSFAKAAEELEKATSALSYTVQKLEEQLGVTLFQRQGRRSVLT 73 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 SGR + +L + ++ ++ G E R+R+ + + L L ++ Sbjct: 74 PSGRLLLEEGRKILVATTYLADQVKELATGWEPRLRLGLESTTEREPFF-QALGTLLEEQ 132 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P +I + V NG W+A+ + ++ +GA + G I A HPL Sbjct: 133 PNLEIDIQECVLNGGWEALETDSIDLLMGATSPIPLQKGFRALPIPPADMLLVAAASHPL 192 Query: 183 A--FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 A QL + ++ DTA + L G +++ V K Q Q+ G G Sbjct: 193 APKANDAQTVARQLPYHRRVVTHDTAKHNVMRNAGLTTGTQALYVQTMEQKVQAQLAGLG 252 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQF 292 +G LP +++ + LV P + +A + S G+ + + + Sbjct: 253 VGHLPRKLIQGHLDSGALVKLTTDEPTTEILDRFIAWKISNKGKALKRLTQLL 305 >UniRef50_A8GGJ7 Transcriptional regulator, LysR family n=54 Tax=Proteobacteria RepID=A8GGJ7_SERP5 Length = 323 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 102/296 (34%), Gaps = 17/296 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + +L F SF+ ++LG++ SA+S I R+E L LF RSTR++ LT Sbjct: 1 MESLGSLDVFVRVGESRSFTTTGQQLGISASAVSKAIARLEERLATRLFHRSTRNVTLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F + +L + A + + +Q ++R+ + + K+Q+P Sbjct: 61 EGALFLERCRRILGEVEAAENELAQSNQMPRGKLRVSLPSV---GLLFMPQFAEFKRQYP 117 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + + +I + I + + ++G+ R AP + Sbjct: 118 DIELDI---DCSDRLVDVIEEGFDAVIRTGE--PSDSRLMARKLGSYRRIMVGAPRY-FE 171 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE-------SILVPDFNTKCQCQI 236 P +L + + + + GQ S+ Sbjct: 172 QCGVPNTPEELMQHRCLRYRFPSSGKVDQWPLSRGGQILTFDLASSMTANTLEPLVCFAE 231 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQ 291 G GI +PD +R+ + LV+ + + + + + Sbjct: 232 SGLGIACMPDIAIRQQLEVGSLVSVLDGFNQDHTILRVLWPSSRHLSPKLRVFVDY 287 >UniRef50_Q46MA3 Transcriptional regulator, LysR family n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46MA3_RALEJ Length = 296 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 115/296 (38%), Gaps = 12/296 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ + +L F A +F++AAE L + +S I+++E +DV L R+ R +E Sbjct: 1 MDIVMDLRHLRYFIAIAEELNFTRAAERLHIAQPPLSMQIRQLEEEMDVTLLNRTRRHVE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LTE+GR F +A +L + +G R+ + + + +L+ ++ Sbjct: 61 LTEAGRIFLEQARQILRATERAVVQAQRAHRGETGRLTVGFFEHT-SYTLLPPILRAYRE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP+ +I + +A+ A+I+ P + D + + I + A+ H Sbjct: 120 RFPSVEILLRWFPVVKQAEALRRGDADISFMRP--VPDLEEVTWETILEEPFVLAVPARH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMV------EDTAHTINKKVGWLLHGQESILVPDFNTKCQC 234 PLA E I+ + P +M + A + + V T Sbjct: 178 PLANA-ESISLKKCAQEPFVMYIPEMAPDFHAMNMRMCASAGFVPKVISEVGQVYTLLGL 236 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKK 290 G GIGF+P + + +V + I + ++L + + Sbjct: 237 VSSGAGIGFVPASV--RKVKFDHVVYKPIEGRQPTIEIMLGYSQRTPTPLMTAFIE 290 >UniRef50_Q2G7U4 Transcriptional regulator, LysR family n=14 Tax=Proteobacteria RepID=Q2G7U4_NOVAD Length = 309 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 64/293 (21%), Positives = 125/293 (42%), Gaps = 7/293 (2%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRST-RSIELTES 64 T + L F GSF+ AA +LG SA+SY I +E L V LF R R L+++ Sbjct: 7 TLDQLRLFLAVVDEGSFNGAARKLGRAISAVSYGITTLEAQLGVTLFEREGSRKPVLSDA 66 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +A + +D A+ + + +QG+E+ + + ++ +++ A +L+ ++ FPT Sbjct: 67 GKAMLAQARAVSDDVDALVAGVRSFNQGLESELGLALD-VMFPTHLVAEVLREFQQVFPT 125 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + E + ++ +A + IG L+ ++ IG++ AP H LA Sbjct: 126 VQLRLHVEALGAIAALVVEGEAELGIG-GPELVALPELERVAIGSVELIPVAAPSHALAR 184 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + E I + R + +++ D + + + + + + + D + G G G + Sbjct: 185 M-ETIPPGEARKHRQLVLTDRSRLTDGRD-FSVVAASTWRLGDLGARHALMREGIGWGNM 242 Query: 245 PDYMVREAMTQSLLVTRQI-HNPRQDSRMLLATQHS-ATGQVTQWIKKQFAPN 295 P ++V + LV I P + G W+ Sbjct: 243 PRHLVDADIASGRLVRLAIPEAPGMAYTFHALWRRDCPVGPARAWMLDALRAR 295 >UniRef50_Q1BN17 Transcriptional regulator, LysR family n=19 Tax=Burkholderiaceae RepID=Q1BN17_BURCA Length = 325 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 141/299 (47%), Gaps = 1/299 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +E+ L GS S+AA LG S +S+ +++ET D +LF R ++LT Sbjct: 21 MLSEDELALLDAIRATGSLSRAAARLGKAPSTVSHAARQLETRFDALLFDRRGYRLQLTP 80 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ +A L D + +R+ ++ G E R+ I +++L +++ Sbjct: 81 AGQLLTDEAARLALDVARLTQRVRQVASGWEDRLWIVSDEVLEFDTLLP-VVRAFDALDS 139 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + T EV G W+A+ + +A++ +GA + L G+ + E+GA+ W FA++P HPLA Sbjct: 140 GVSLRFTHEVLGGTWEALRDGRADLVVGATNELPAMPGLKWFELGAMEWVFAVSPRHPLA 199 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + + + +++V D++ + LL GQ + VP K Q G+G+ Sbjct: 200 AASGVLTRDAIGAHRSVVVADSSRRAAGRAYGLLGGQAVLAVPSMRAKILAQRDALGVGW 259 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 +P V + + LV + +PR+ + + +A G+ QW +Q + + Sbjct: 260 VPRRRVASLLARGELVEKPTADPREPNLLYVAWHGDRDGRALQWWLEQLREPRLAQRLL 318 >UniRef50_Q2SLJ2 Transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SLJ2_HAHCH Length = 293 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 10/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T E L AF GSF AA L T S +S + +E D+ LF R T LT Sbjct: 1 MTNEQLRAFVGVVEHGSFRAAAAALFKTQSTVSAAVAALEQEFDLQLFNRETYRPTLTIE 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARL--LQVLKKQF 122 G+ FR+A LL+ + ++ ++QG + I ++ + H L L+ K+ Sbjct: 61 GKALFREAKALLSKAHDLEMLGHRLAQGKAPELSISLSAMCA---HLPGLDTLKAFAKKR 117 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ + TE +GV + ++ +A +AIG + ++TE+ + AP Sbjct: 118 PEMRLHLHTEHLSGVLEQLLLEKAEVAIG--PQVGLDDRYEFTEVAKVTQVTVAAPGFTE 175 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A + ++QLR P+I++ D+ ++ G V DF K + G G Sbjct: 176 AGGDGVVRQAQLRNRPHILIADSGSLAPFDHVNVIPGGHRWYVNDFLMKKGLLLSGMGWA 235 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQD---SRMLLATQHSATGQVTQWIKKQFA 293 +P +MV + + L Q+ N L+ ++ + Q + Sbjct: 236 RIPLHMVDAELERDELRFLQVENFPSRSLVPIYLIRLRNQLLSPLAQEFWDEML 289 >UniRef50_A6GPV4 Probable transcriptional regulator transcription regulator protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GPV4_9BURK Length = 303 Score = 237 bits (607), Expect = 3e-61, Method: Composition-based stats. Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 4/302 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L GSF+ AA L SAI+Y ++++E LDV+++ RS +LT + Sbjct: 3 INLDSLALLELIEARGSFAAAAVALNKAPSAITYQLRQLEESLDVLIYDRSGHKAKLTPA 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + LL A+ +R+ ++ G EA +RI ++ ++ K +Q Sbjct: 63 GKALLEEGRKLLESTDALTKRVKAVASGWEAELRIVLDSVVPFEKAIP-WIQAFDALESP 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAP---DTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 ++ ++EV +G W+A+ + +A++ IG+ + G+ G + FA+APDHP Sbjct: 122 TRLRFSSEVLSGTWEALYSGRADLLIGSRLDQNQFASATGLHIQSFGQSLFVFAVAPDHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 LA EP+ +R Y + V DT+ L GQ + VP+ TK + Q+ G G Sbjct: 182 LAHAEEPLCIDTIRQYRAVAVGDTSRNFKPLTFGLQSGQAVLTVPNLQTKVKAQLAGLGC 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 G+LP ++ + L+ ++ + + S + A Q + G+ W K A + Sbjct: 242 GWLPWNLIEHEVANGDLLIKKTEDVTRQSSLCFAWQRGSQGKALDWWTKHLATVQLNFQP 301 Query: 302 YQ 303 Q Sbjct: 302 PQ 303 >UniRef50_Q2T1K3 Transcriptional regulator, LysR family n=6 Tax=Proteobacteria RepID=Q2T1K3_BURTA Length = 304 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 52/301 (17%), Positives = 105/301 (34%), Gaps = 16/301 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++ F AA GSF+ A LGL++ + ++ +ET + L R+TR LTE Sbjct: 1 MDRLTSMAVFVKAAETGSFAAAGASLGLSSQMVGKHVRFLETHYGMRLINRTTRRQSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR F+ ++ +L + A+ + +RI + + +L + +P Sbjct: 61 AGRAFYERSRAVLAEAQAVDALAANLMAAPRGTLRINAP-ISFGVHCLMPMLASYMRAYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 QI +T + +++ + I L G+ + R +P + LA Sbjct: 120 EVQIDLT---LSDRIVDVVDEGYDAVIRIAP--LADSGLIARPLAPYRLVLCASPAY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL--------LHGQESILVPDFNTKCQCQ 235 P + L + + + + + + + + V + Sbjct: 174 EHGAPAEPADLAAHECLGFSYSGQPAALEWPFESAQGQQHSVRVRSRLAVNNGAALRMAA 233 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVT-RQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 + G GI P +VR+ + LV H P +L + + Sbjct: 234 LDGLGIILQPAELVRDDLAAGRLVRLLPGHEPPARPIHVLYSPDRQPTPKLRSFIDAVIA 293 Query: 295 N 295 Sbjct: 294 A 294 >UniRef50_Q0A8T5 Transcriptional regulator, LysR family n=2 Tax=Gammaproteobacteria RepID=Q0A8T5_ALHEH Length = 305 Score = 237 bits (606), Expect = 3e-61, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 106/297 (35%), Gaps = 13/297 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + AF GSF A+E LG TS S + +E L LF R+TR + LTE Sbjct: 1 MDRLLAMEAFVAVVEAGSFVAASERLGRATSTTSRQVSELEAHLQARLFQRTTRRLTLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F+R DLL + + + +R+ + + H A L+ + P Sbjct: 61 QGQVFYRHCKDLLARLEEAEAEVGAGTGEPNGVLRVTAP-VSFGTLHLAGLIPQFHARHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ + ++ ++A+ +L + + ++ ++ AP + LA Sbjct: 120 RVHLNLS---LDDRQVDLMGEGHDLALRISRSLPEH--LVARKLASVSIITCAAPGY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P L+ + ++ T + + + + + + G Sbjct: 174 QAGRPERPEALQAHTCLLYSQAEPYRTWTYQGPQGPIPVRVGGYLTANNGDVLRAAALAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAP 294 +GI LP ++VR+ ++ LV P + + A Sbjct: 234 DGIAQLPAFLVRDDLSAGRLVPLLPDYPLPPLGVYAVYPSRRYLPAKVRAFVDFLAE 290 >UniRef50_B9JIM7 Transcriptional regulator protein n=12 Tax=Proteobacteria RepID=B9JIM7_AGRRK Length = 306 Score = 237 bits (606), Expect = 4e-61, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 102/298 (34%), Gaps = 10/298 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M+ +L AF SF +AAE L ++ A++ I+++E + L R+TR + Sbjct: 1 MSINCEILDLRAFQAVVELESFHRAAEALHISQPALTRRIQKLEQSIGAPLLDRTTRHVA 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 T +G+ +L +F I + + +++ + Sbjct: 61 PTATGQEMIPLVRRMLEEFDGSLFAIKDSGSQRRGLITMACVPTA-AFYFLPTVIRTFGR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P ++ + N A+ + I + + + + A+ DH Sbjct: 120 DYPHIRLRIRDLTANEGLQAVARGEVEFGINLMGN--SDPDLSFEPLIDDPFVLAMRKDH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKCQCQI 236 PLA E I +QL +P ++V+ ++ L + V NT Sbjct: 178 PLAAFDE-IHWNQLEGHPLVVVDRSSGNRTLLDAALARANLRLNWFYEVTHLNTSLGLVE 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFA 293 G GI LP + LVTR I NP + + + SA Sbjct: 237 AGLGISVLPR-LATPQEEHPFLVTRPIVNPVVTRTIGIVRRRSATLSPAADRFIDMLL 293 >UniRef50_A4XPG0 Transcriptional regulator, LysR family n=1 Tax=Pseudomonas mendocina ymp RepID=A4XPG0_PSEMY Length = 294 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 51/290 (17%), Positives = 105/290 (36%), Gaps = 8/290 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A GS S AE L ++ A++ I+ +E LD+ LF R R ++LTE Sbjct: 1 MNLHHLKVFLAVAEAGSISAGAERLHISQPAVTREIRELEANLDLRLFDRLPRGVQLTEG 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ A + A +R + +Q + + + + L L+ + P Sbjct: 61 GQRLLDYARRIFALEQAAERDLRDFAQLEQGELHLGASATL-GAYLLPPLISRFRALHPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +++ V + + + ++ + D+ + +AP HPLA Sbjct: 120 IFVSLEVSNTEAVTRQLDDGRISLGFV--EGPFAQADYDHRLLARDALLPVVAPRHPLAR 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGW----LLHGQESILVPDFNTKCQCQILGEG 240 P+ S+L+ YP M E + L + + + + G+G Sbjct: 178 TAAPLQASELQAYPLYMREPGSGARASVEHAYRVHGLEPRAGMAIGSTEALKRLLADGQG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIK 289 I +L +V + L + + + + + + + ++ Sbjct: 238 IAWLSQRVVERELASGELQRLTVQDLQIERELHVLWRPGASLSPAPAAFL 287 >UniRef50_A1JP38 LysR family transcription regulatory protein n=4 Tax=Proteobacteria RepID=A1JP38_YERE8 Length = 303 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 62/307 (20%), Positives = 120/307 (39%), Gaps = 21/307 (6%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M + AF T A+ GSF+ AAE LGLT SA+ ++ R+E L + LF RSTR + Sbjct: 1 MRKTDHLGGITAFVTTAQHGSFTAAAERLGLTKSAVGKSVSRLEDRLGLKLFQRSTRRLS 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G F ++ + + R+R+ + + LL + + Sbjct: 61 LTPDGEKFLASCQSAIDILELAEAELTAHITHPAGRLRVDLPAAFGRQRVLPILL-DITR 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 Q+P +TVT ++ + +I ++ I + L D G+ + + +P++ Sbjct: 120 QYPELTLTVT---FSERFVDLIEEGIDLVIRIGE-LADSSGLVARRLTTQKLVICASPEY 175 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLL----------HGQESILVPDFNT 230 L EP+ +L + ++ N+ + WLL + D + Sbjct: 176 LLHNA-EPVQPEELSQHKCVV----GFRRNQPISWLLKDNTGQIHRYTPTPTHEFADGDA 230 Query: 231 KCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIK 289 + G G+ LP ++V + + L I + + + L ++ +++ Sbjct: 231 MLAATLAGCGLCQLPLWLVGKYLQSGGLKEVLIGHSGGEMPVSALWPKNRQLLPKIRYVV 290 Query: 290 KQFAPNG 296 + Sbjct: 291 DELVRAA 297 >UniRef50_Q1IRM1 Transcriptional regulator, LysR family n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRM1_ACIBL Length = 302 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 99/294 (33%), Gaps = 10/294 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + LL F A+ G+FS+A E++ + SA+S I+++E LF RS + + L+ + Sbjct: 1 MDFDQLLTFLEVAKLGNFSRAGEKVYRSQSAVSAQIRQLEQEYGERLFDRSGKIVRLSPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A ++ R + + + I N+ + +QFP Sbjct: 61 GEVLLEYAQRMVALRNESLRAVADQGETPRGVLSIGANEATCL-YVLPDIFTEYCQQFPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 QITV + A+ + ++ I + + I R + HPLA Sbjct: 120 VQITVYRNFSRKILQAVEDGVIDLGIAT--LPVKSPSLKVHPIFRDRLELMVPVRHPLAA 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH----GQESILVPDFNTKCQCQILGEG 240 E + ++ YP I T +T + + ++ +P + G G Sbjct: 178 -KESVTIEEIAEYPQI-FPKTGYTRQQLDKLFRPYNSKLRVAMEIPSVGLIKSFVVSGVG 235 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFA 293 + L ++ + I + L + + Sbjct: 236 VTLLSSTFAQDEVRAGKAKMLPIAGVDMWRELGLIYRNDRTLPRSATAFIDLMR 289 >UniRef50_C7I0K1 Transcriptional regulator, LysR family n=1 Tax=Thiomonas intermedia K12 RepID=C7I0K1_THIIN Length = 319 Score = 237 bits (605), Expect = 5e-61, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 107/296 (36%), Gaps = 10/296 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F+ AAR F KAA+E+ LT A+S I+ +E+ + + LF R +S+ LT +G Sbjct: 5 TIRQLRVFSAAARHLHFGKAAQEMHLTPPAVSMQIRELESQVGLPLFERQGKSVSLTLTG 64 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 Y A +L + + + R+ I + RLL ++P Sbjct: 65 EYLVVYARKVLATLKDAEDAMARLRGIKAGRLTIGMVST--AQYFVPRLLARFHAEYPHV 122 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++ ++ + + N++ ++AI A P HPL Sbjct: 123 EVRLSVGNREQLVSHLQNSELDLAIMGRP--PRDVATRAEPFAAHPMGIIAPPQHPL-ST 179 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESI----LVPDFNTKCQCQILGEGI 241 P + + L + I+ E + T +L Q + + T Q + GI Sbjct: 180 GGPHSATLLTQFNFIIREPGSGTRATFEEYLHQHQMELPLFTEMQSNETIKQAVMANMGI 239 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 FL + + + +LL I P + + + + +G Sbjct: 240 SFLSLHTIDLELRNNLLTVPSIEGMPLLRRWYAVNSLAKLLSPGAEAFRYFILEHG 295 >UniRef50_Q1QY93 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QY93_CHRSD Length = 298 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 52/304 (17%), Positives = 120/304 (39%), Gaps = 21/304 (6%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + L F R GSF+ AA L ++ S S + +E L V L RSTRS+ LTE Sbjct: 1 MTTLDALRVFVEVVRAGSFTAAARRLSISKSLASKRVAALEDELSVNLLNRSTRSLRLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++ ++ + + + ++ +++ ++++ Q+ + + A +++P Sbjct: 61 AGQIYYEHGLRVIEELQSAEAQVQSVTSQPRGQLKVSA-QVSFGFMYLAAPTTAFMRRYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + E + ++ I ++ ++AI L + + + + APD+ LA Sbjct: 120 DVSVEILLE--DQRFEPI-DDSVDLAIRM--GPLPPSSLVSRPLCKVVYGLYAAPDY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVED-----TAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P+ + Y + + + +++ + + G Sbjct: 174 RAGRPLHPRDIADYDTVFYGNYDLGAHWRFSLNGQPLDIEPNSRLVINNLLGVVEAAKSG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ---------VTQWIK 289 G+ +LP + R A+ + L+ + ML+ + +T W + Sbjct: 234 FGLAYLPTFAARAAVEEGQLIPLLQPYWNEHGSMLVLFRSRKYLPDKTRAYLDFITDWFR 293 Query: 290 KQFA 293 + A Sbjct: 294 EHLA 297 >UniRef50_D2C366 Transcriptional regulator, LysR family n=3 Tax=Enterobacteriaceae RepID=D2C366_DICD5 Length = 304 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 89/285 (31%), Gaps = 10/285 (3%) Query: 1 MNSIFT-EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSI 59 M + F A GSFS A +LGL +S + +E L L RSTR + Sbjct: 1 MGLRMDRLLLMTCFVRTAETGSFSAAGRDLGLGQPNVSRHVATLEEHLQTRLLHRSTRKL 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 LT G ++ +A +L + + +R+ L + Sbjct: 61 SLTPEGERYYLEARRILEAVEESESSFRE-NVTPTGLLRVACPTAL-AHTFLVPHIPDFL 118 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 +++P + + N + +I+ A +AI L+ + +G + Sbjct: 119 ERYPELTLDLQI---NDRYINLIDEGAELAIRI--GHLEDSAMRARRLGMFERVCVASNK 173 Query: 180 HPLAFVPEPIAESQLRLYPNIMVE-DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 + LA P L+ + ++ T + + + V + G Sbjct: 174 Y-LAKHGTPNIPEDLKKHDCLIYTLLTTGATWRFQDINVPVSGRLRVNSPEAVQKFVNAG 232 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ 283 GI P+++ E + L + + Sbjct: 233 VGIAQGPEWLFEEGLANGNLQLLLTDYTAPPVPIQAVYVANRLLP 277 >UniRef50_A4SJL9 LysR-family transcriptional activator n=2 Tax=Aeromonas RepID=A4SJL9_AERS4 Length = 290 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 65/300 (21%), Positives = 113/300 (37%), Gaps = 11/300 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN++ E + F T GSF+ AAE LG+ S++S I R+ET L V L R+TR + Sbjct: 1 MNNV-DLELMGLFATVVEQGSFTGAAEALGMPKSSVSQKISRLETQLGVRLLQRTTRRLS 59 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT G + + LL + + + RVRI + R+L + Sbjct: 60 LTPQGEIYVEQCQALLALARSANLAMARLRAAPAGRVRITAPEAT-GTLLLGRILAEFRA 118 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P + +T + + D + ++A+ A L + IG + AP + Sbjct: 119 LYPEVVLELT--LCDDQLDLVGEG-YDLALRAAP--LKDSSLICRRIGQVPRHLVAAPGY 173 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 LA P S+L L+P ++ ++ GW Q + + + + G Sbjct: 174 -LAAHGAPQQLSELGLHPCLVHSALPVWPLQEGGW--RPQGACISNSLLALRELALHEGG 230 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQVTQWIKKQFAPNGILT 299 I LP ++ +E + L +P + L + + A Sbjct: 231 IALLPHHVCQEDLATGRLQKLLPDHPIPPNPFYLIYPSREHLAPALRSLMDFVAERLPFA 290 >UniRef50_Q30Z73 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio RepID=Q30Z73_DESDG Length = 319 Score = 236 bits (604), Expect = 6e-61, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 90/301 (29%), Gaps = 13/301 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + L AF SFS+A +EL L+ IS + +E LDV L R R + T Sbjct: 22 DMIDFRRLEAFCKVYELRSFSRAGDELFLSQPTISAHVSALEKELDVRLLDRMGRGVLPT 81 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 +G +R A I + I V + + + ++ + F Sbjct: 82 PAGEILYRHAMTAFASLETAHLEISQLQDIITGEVPVGAS-TIPAQYLLPPVMAAYMRSF 140 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P Q+ + T + + + + + I +T I APD Sbjct: 141 PEVQLQLRTGDTGEIIRKVGAGELTLGVVGAHD--QQPDIVFTPIIDDELIIIGAPD--F 196 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQ 235 A ++ L P ++ E + T L + V + QC Sbjct: 197 APRSGSVSCESLADMPWVVREAGSGTWKIFSAALGTHGIDCRSFRPVACVDSSQSVIQCV 256 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSR-MLLATQHSATGQVTQWIKKQFAP 294 G G+ V E +++ LV + + + + Sbjct: 257 RAGLGVSVTSRIAVAEFLSRGELVEITVDGLDVRREFFCIYHSRRQLFPAARHFIEFLTK 316 Query: 295 N 295 Sbjct: 317 K 317 >UniRef50_A8TJ36 Transcriptional Regulator, LysR family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJ36_9PROT Length = 311 Score = 236 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 58/309 (18%), Positives = 104/309 (33%), Gaps = 16/309 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F A G FS AA+ LGL+ + S ++ +E L V L R+TR + L+E Sbjct: 1 MDRLTLLQTFVAVADTGGFSSAADRLGLSRAMTSRHVQVLEDRLGVRLLHRTTRRVSLSE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + +A LL DF + + +R+ + + H A L + P Sbjct: 61 AGLGYLERARRLLADFDDAETEVRGERATPRGTLRVN-GPVSFGRAHLAATLPSFLVRHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +T N +I ++AI L + +G + A +P + LA Sbjct: 120 GLSVELTV---NDRVVDLIEEGYDVAIRIGR--LSDSSLIAKRLGTVAVRLAASPAY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAH------TINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P + L + + + T ++ + + + + Sbjct: 174 AHGIPTTPNDLTDHTWLGYTYSTGVAGLRFTSADGRDAVVRLGPRLTANNGDVLTEIAAG 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPNG 296 G GI PD+++ + LV D + S + A Sbjct: 234 GAGIILQPDFILGPYLADGRLVPVLPDWGVPDLDIHAVHHQSRHVAAKVRAFVDHLAE-- 291 Query: 297 ILTGIYQDL 305 DL Sbjct: 292 CFRSPPWDL 300 >UniRef50_Q2KW50 LysR-family transcriptional regulator n=4 Tax=Bordetella RepID=Q2KW50_BORA1 Length = 301 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 106/307 (34%), Gaps = 13/307 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + F GSF+ AAE GL S ++ I +E V L R+TR + LT++GR F+ Sbjct: 1 MQTFARVVELGSFAAAAERAGLARSVVTRQIAYLEEKYGVRLLNRTTRKLNLTDAGRAFY 60 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + LL++ I + S R+RI + + H + +++P I + Sbjct: 61 ERIRPLLSELADIDLALRAQSSQPTGRLRISAP-VSFGVLHLGPAVADYLQRYPDVVIDL 119 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 N ++ + ++A+ L + + AP + LA P Sbjct: 120 ---DLNDRVVDLVQDGYDVAVRI--GPLTDSSLVARPLAPQTLQVCAAPSY-LARHGTPA 173 Query: 190 AESQLRLYPNIMVEDTAHTINKKVG-----WLLHGQESILVPDFNTKCQCQILGEGIGFL 244 LR + + + + L+ S+ + + + G GI Sbjct: 174 QPEALRQHQCLHYSYASGGTDWVFEKDGQTTLVRITPSMRANNGDVLRTAALAGHGIILQ 233 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQFAPNGILTGIYQ 303 PD+++ + + LV R M++ H + + + Sbjct: 234 PDFLIGDDLRAGRLVPVLPDYRRPVITMMMVYPHRRLLSPTVRSFVEHLEAHFGHATQSS 293 Query: 304 DLLHREN 310 + N Sbjct: 294 SAGNGRN 300 >UniRef50_B9J7R4 Transcriptional regulator protein n=5 Tax=Proteobacteria RepID=B9J7R4_AGRRK Length = 301 Score = 236 bits (603), Expect = 8e-61, Method: Composition-based stats. Identities = 60/309 (19%), Positives = 111/309 (35%), Gaps = 13/309 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E L AF T A GS S+AA L L+ S +S + ME L L R+TR + LTE Sbjct: 1 MLKIEGLTAFVTVAEAGSISEAARRLRLSKSVVSERLAEMEKTLGATLLHRTTRKLTLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F +AT ++ + + + +RI + + H +L P Sbjct: 61 DGTVFLERATRIVREVREAAADLAERRGTLAGPLRIAAP-VTFGRMHLGPVLYPFLAAHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++T+ + ++ + I L+ + + R +PD+ L Sbjct: 120 EIELTLE---LDDRRVDAASDGYDAIIR--HGLIADSRLVAWPLARSRRLLVASPDY-LR 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT----AHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P + S L + I + + ++ G+ ++ + + + I G Sbjct: 174 QHGMPASPSDLENHRGIFYTNRGIADWRFQGPEGAVIVRGKLALGINNGDVSRDAAIAGL 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 GI LP ++ ++ + LLV + P + + + + I Sbjct: 234 GIALLPAFIAGPSVNEGLLVDIDVGCRPEPEFVFMAHPEGRNPSAKLRAIADHLK-KAFG 292 Query: 299 TGIYQDLLH 307 Y D L Sbjct: 293 DPPYWDTLG 301 >UniRef50_Q46RP0 Regulatory protein, LysR:LysR, substrate-binding n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46RP0_RALEJ Length = 306 Score = 236 bits (603), Expect = 9e-61, Method: Composition-based stats. Identities = 71/302 (23%), Positives = 128/302 (42%), Gaps = 3/302 (0%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 T + L + AR G+F+ A +EL S++SY ++++E+ L + +F RS + LT Sbjct: 2 RITLDALQVVESIARCGTFALAGKELHKAPSSLSYVVQKLESDLGITVFDRSAHRVRLTL 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + LL ++ R+ G EA ++I + L+ + + + Sbjct: 62 AGEVLLDEGRRLLRAANDLEERVRRAEAGWEAELKIATDALVPFDAILP-FISAFQAENS 120 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + E+ W A+ N ++ IGA G+ G R F +AP HPLA Sbjct: 121 YTRLLFSQELPGNNWLALATNSVDLLIGAVGDPPAVQGLFTVPAGTARSIFVVAPGHPLA 180 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 V EPI + L + + V + + L+ GQ I VP + K + G G+ Sbjct: 181 AVEEPIDCTVLWQHQFVEVWLPQDSAPDPLHTLVEGQRHISVPTLDAKVSVLLSGLACGY 240 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 LP + + + LV R++ R +A + + G+ W + + + Q Sbjct: 241 LPVCAAQPHIDKGRLVVRRLGEERPPQTFHIAWRSNDPGRAIGWWIE--RKEALANALRQ 298 Query: 304 DL 305 L Sbjct: 299 SL 300 >UniRef50_A4Y0W1 Transcriptional regulator, LysR family n=13 Tax=Gammaproteobacteria RepID=A4Y0W1_PSEMY Length = 320 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 115/299 (38%), Gaps = 10/299 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 T L F GS+S+AA+E+ LT A+S I+++E + LF + + LTE Sbjct: 7 RMTLRQLQVFRAVCEHGSYSRAADEMALTQPAVSLQIRQLEELVGQPLFEYVGKKLYLTE 66 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 + R ++D+ ++ ++ + ++ ++ +C+ L ++ +P Sbjct: 67 AAEALRRASSDIFGRLESLDMQLSDLQGSLQGQLNLCVESS--AKYFVPHLFAEFRRHYP 124 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +T + V + ++ ++ I + + +D+ APDHPL Sbjct: 125 EVSLNLTVVNHALVVRRLTLSRDDLMIMS--QVPQDMALDFMPFLNNPIVAVAAPDHPLC 182 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGE 239 + + L + ++ E + T + H +++ + + + + I G Sbjct: 183 SQ-QTLQLQDLTAHALLIRESGSGTRRACEEYCNQKRAHFAQTLEIGSLDAQREAAIAGL 241 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 G+ LP + VR + LL + P Q S ++ + V Q Sbjct: 242 GLALLPRHAVRLELEHGLLRELPVAELPLQRSWCVVNIRGRRLSPVAQAFVDFIRSERP 300 >UniRef50_A9IDF8 Transcriptional regulator, LysR-family n=11 Tax=Proteobacteria RepID=A9IDF8_BORPD Length = 304 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 50/298 (16%), Positives = 97/298 (32%), Gaps = 12/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F + GSF++AA +L L+ +A+S I +E L L R+TR + LTE Sbjct: 1 MEQLTALRVFRNVVQLGSFAQAARQLRLSPAAVSKNIGELEAHLGARLLQRTTRRMSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++ + + +L+D R + + G +R+ L + + + + +P Sbjct: 61 AGSLYYEQISRILDDLDEAGRSLAPLQTGPSGVLRVSAPMSLTLSR-LSAAIPAFLQAYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + II ++AI D L+ + + + AP + Sbjct: 120 DLSLDLH---LEDRRVDIIQEGYDLAIRGTDQ-LEDSSLVARPLTVLPHVLCGAPAY-FQ 174 Query: 184 FVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 EP LR + + D + + V G Sbjct: 175 RHGEPDTPQALRGHNCLRFTLSGHADEWTFRRHGQTVRVPVRGRYQVNSSLAVRDALRAG 234 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPN 295 G+ +P V + + Q L D+ + + Sbjct: 235 FGLSLVPRTYVEDDLAQGRLRAVLNDWAMVDTYLYAVYPSRRHVAAKVRAFADFVRAE 292 >UniRef50_Q67PU0 LysR family transcriptional regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67PU0_SYMTH Length = 299 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 48/296 (16%), Positives = 105/296 (35%), Gaps = 11/296 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++L+ F G F++A +GL+ A++ + +E L L RS R I LT + Sbjct: 1 MLLQHLITFCRVVETGGFARAGALVGLSQPAVTRQVAALEAELGTPLLDRSGRQIHLTPA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR + +A ++ +K + ++ R+ I + + +L K++ P Sbjct: 61 GRLVYERARRIITAVNTLKEEVADLAHPERGRIAIGAVTTV-GLRLLPPILAAFKREHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V + ++ + +AI T + + + AP + Sbjct: 120 IRVHVKADRTQETIQRLLEGEIELAI--LPTPVTHPRLRSVPLVEDPVVLVCAPGRR-SE 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 +P+P+ ++L I + + ++ ++ G G Sbjct: 177 LPDPLPLAKLGEIDLISFQAPSRFRTFVDAMLEQAGVYPNVTMEFDSHEAVTLMVEAGFG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATG--QVTQWIKKQFA 293 +P V + +V ++ PR LA +H G T+ + + Sbjct: 237 CALVPASAVERELALGTVVRVEVEGMPRMARTTSLAFRHPNPGWSPATERLFQMIV 292 >UniRef50_Q1AYT0 Transcriptional regulator, LysR family n=1 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AYT0_RUBXD Length = 293 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 106/297 (35%), Gaps = 14/297 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ F AA F +AA L +T ++S + +E L V LF R+ R + LTE+ Sbjct: 1 MELSHIRYFVAAAEELHFGRAARRLHVTQPSLSKRVAGLERELGVRLFHRTRREVRLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRIC-INQLLYTPKHTARLLQVLKKQFP 123 G F A +L D +G R+ I + +Y +L+ ++FP Sbjct: 61 GEIFLEGARRVLEDALRAAEEARKAGRGELGRLEIGFFSPAIYG--VLPEILKEYHERFP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++T+ + + + + I ++ G + A+ HP A Sbjct: 119 EVRVTLHEWTSSVQLERMREGKIEIGFM--RAPVEEAGFVTEHVFVEPVVAALPEGHPQA 176 Query: 184 FVPEPIAESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 E ++ +L P IMV + ++ + + V + + Sbjct: 177 RR-EVVSPRELADEPFIMVPRSKEPNSFDRYVSICQRAGFSPKITQEVFEIHAIVGLVAT 235 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G+ F+ + + + +V R + +P + + S V + + Sbjct: 236 GMGVAFVQGSVAN--LKRPGVVYRPLDDPEARIGTAIVRRSSRPSPVLRTFLETLQA 290 >UniRef50_B9XBB1 Transcriptional regulator, LysR family n=2 Tax=Verrucomicrobiales RepID=B9XBB1_9BACT Length = 299 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 60/296 (20%), Positives = 110/296 (37%), Gaps = 12/296 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ F A SF +AAE L L +S IK +E L LF R+TRS+ LT S Sbjct: 1 MELRHIRYFVAVAEELSFRRAAERLHLAQPPLSAQIKDLEGELGTKLFERTTRSVRLTAS 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A +L ++R+ G+ +RI + T + A +L+ + QFP Sbjct: 61 GRVFLDEARAVLAAAEKAEQRVRKAEHGLVGTLRIGVLAPTATSR-LATILRSYRNQFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q ++ ++ +Q ++ + P + +D+ + A+ H LA Sbjct: 120 VQFSLHEMTSVEQLQSLRLDQLDVGLLRPP--VAFPELDFHFLEESPMVLAVPAGHRLAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAH------TINKKVGWLLHGQESILVPDFNTKCQCQILG 238 I P +M+ + +N D ++K G Sbjct: 178 Q-RLIEWKDFHNEPMVMIHPSLQHGYYDTFLNLCAKAGSTPIVGQYANDVHSKMWLISAG 236 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G+ P + + LV R++ + L+ + + + + F+ Sbjct: 237 FGVA--PTTKTIAEVKRPGLVFRELPPGLPLVQTLIVWKRTNNSPMVGNFIECFSK 290 >UniRef50_A5VAW9 Transcriptional regulator, LysR family n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VAW9_SPHWW Length = 320 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 58/308 (18%), Positives = 108/308 (35%), Gaps = 15/308 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 L F G+FS + L + S +S I +E L LF RST+ + +TE G Sbjct: 21 NLALLRVFVAVVETGNFSHTGQRLRVVPSTVSKHISALEKRLGGQLFVRSTQKLGVTELG 80 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + A +L D A + I + + ++I ++ +H A +L + P Sbjct: 81 LRLYDHALAILQDVEAAEIDISEYNSEPQGILKIAA-GTVFAQRHLAPILIRFLEANPKV 139 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + V+ + +I++ ++AI D L G+ ++ + AP + LA Sbjct: 140 SLDVSLSTTSN---HLISDGIDVAIRISDAL--DPGLIAVKLAPNIRLYCAAPAY-LARE 193 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINK------KVGWLLHGQESILVPDFNTKCQCQILGE 239 P S L + ++V A + + + + + + Q + G Sbjct: 194 GTPARASDLARHNCLVVRGVAQSAQWPIKGETGATEFIAVSGNFVADNVDLLLQAVVAGV 253 Query: 240 GIGFLPDYMVREAMTQSLLVTR-QIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 GIG LP +MV + + LV + + T+ Sbjct: 254 GIGHLPLFMVYDLLASGDLVEIFPDSRAVASHIYAVFPERRNMPLKTRAFIDHLKAE-FR 312 Query: 299 TGIYQDLL 306 +L Sbjct: 313 PPPPWAVL 320 >UniRef50_Q2T3T5 Transcriptional regulator, LysR family n=56 Tax=Proteobacteria RepID=Q2T3T5_BURTA Length = 399 Score = 235 bits (601), Expect = 1e-60, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 108/298 (36%), Gaps = 12/298 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 +I ++L F T GSF+ AA++L L+ +S + +E L V L R+TR + +T Sbjct: 99 TIMQFDDLRIFVTTVEAGSFTGAADKLLLSKQFVSRRVMALEASLGVRLLVRNTRKLAVT 158 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 + G F+R+AT +L D + + + ++I + + + + L+ + Sbjct: 159 DLGHEFYRRATRILADVAETEEAMSARHGDLRGTLKISAP-MSFGIAYLSPLIAEFLVRH 217 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++ V + +I ++A+ L + +G +R +P + Sbjct: 218 PAVRLHV---DLSDRHVDLIGEGFDLALRI--GALPDSTLIARRLGELRMVACCSPAYR- 271 Query: 183 AFVPEPIAESQLRLYPNIMV----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P + L + ++ Q ++L + + I G Sbjct: 272 RKHRAPATPADLHGHACLLYGQEGRTGWEFTIGGARRTFEVQGALLANNGDVIRDAAIAG 331 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVT-QWIKKQFAPN 295 GI LP ++V A+ LLVT + + T + Sbjct: 332 LGIALLPHFIVAAALDAGLLVTVLEPFAQSPLPVSAVYPQHRQDMATCRAFLGFIEER 389 >UniRef50_Q0K5G0 Transcriptional regulator, LysR-family n=11 Tax=cellular organisms RepID=Q0K5G0_RALEH Length = 315 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 112/303 (36%), Gaps = 12/303 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + +++ F+ GSF++AA++L ++ + ++ + +E+ L L R+TRS+ LT+ Sbjct: 1 MDRLQSMRVFSKVVELGSFARAAQQLEMSNAVVTRYVADLESHLGTRLLNRTTRSLSLTD 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G + ++ +L D + + SQ + +R+ + +++ LL ++ +P Sbjct: 61 AGETYLQRCQQILEDVEEAESVVTARSQSLSGTLRL-VTPVMFGLHLLPELLARFQQLYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 V + + D + + ++A+ D L G + + + +P + +A Sbjct: 120 DVVFDVI--LSDRNVDIVEEGR-DVAVMLSDLGL-GSHLVARPLLSAEVILCASPGY-VA 174 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 +L + I + + + + + +L + Q + Sbjct: 175 AHAPIRHAHELSHHRCIAMRLPSAEHEWTLLGPEGEVTVPIRSGLLCSNAELAHQAALAD 234 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNGI 297 G+ L Y+ R + LV + + + G Sbjct: 235 MGVAMLSSYLARPNIESGKLVHVLPQYQLPRRDVSVVYPSRKFLPTKVRAFIDFLLEEGQ 294 Query: 298 LTG 300 + G Sbjct: 295 VRG 297 >UniRef50_A9D356 Transcriptional regulator, LysR family protein n=1 Tax=Hoeflea phototrophica DFL-43 RepID=A9D356_9RHIZ Length = 306 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 61/303 (20%), Positives = 117/303 (38%), Gaps = 9/303 (2%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 T + F T GSF+ AA +LG SAI+Y + ++E V LF R+ LT Sbjct: 2 DAITLDQFTVFLTIIEEGSFAAAARKLGRAQSAITYAVHKLEDQCAVQLFDRTAYRPVLT 61 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E GR + ++ D + + ++SQGIEA + + + ++ A L +F Sbjct: 62 EQGRALLPRVRRIMEDLGEFRIQAKSMSQGIEAELVLVVETFIHLS-MVAPALSAFHVKF 120 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P Q+ + + + + A++ + ++ + + + APDHPL Sbjct: 121 PMVQLKIISVRPQDASRQLQEHDADLGL-FMLAPKPQTDLESLLVAEMDFLAVAAPDHPL 179 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 A +P + +R + I+V + + + ++ + V + + G G G Sbjct: 180 AKLPPHFPKEAMRDHLQIVVSNPKAPDDATIYGVVGVNQ-WRVSEVRLRYDLIKQGVGWG 238 Query: 243 FLPDYMVREAMTQSLLVTRQIHNP------RQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 +P MV + + LV Q + ++ + A G ++ A Sbjct: 239 SMPRPMVEADLARGDLVVLQPAQWDSSNIMPRFKTVVAKHKDRALGPAGTFLMAAMAQEL 298 Query: 297 ILT 299 Sbjct: 299 PGD 301 >UniRef50_B6IYM5 RuBisCO operon transcriptional regulator n=1 Tax=Rhodospirillum centenum SW RepID=B6IYM5_RHOCS Length = 314 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 64/310 (20%), Positives = 112/310 (36%), Gaps = 14/310 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F AAR SF++ AE+ LT AIS+ IK++E LF R RS+ LT++G Sbjct: 7 TIRQLQIFAAAARTLSFARVAEQFRLTPGAISFQIKQIEGLCGFPLFERVGRSVVLTDAG 66 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 AT +L + ++++ + V + + LL + + P Sbjct: 67 AALLDHATVILKELNDADQQMEALRGSTGGSVTLGLVST--AKYIVPHLLSRFQAERPGV 124 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 IT+ + A+I +IAI + ++ AP HPL Sbjct: 125 TITLQDGNRRKIHAAVIKGDVDIAIMGRPSAEV---VESVAFANHPSTIIAAPSHPLTRG 181 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEGI 241 + L I+ E+ + T G+ L + ++ Q + G GI Sbjct: 182 GR-LRLHDLENERFIVREEGSGTRALMDGFFRSQGLTPRIAMTTSSNEMIKQAVMAGIGI 240 Query: 242 GFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTG 300 + + ++ + LL I P + ++ + V ++ G Sbjct: 241 ALISRHTIQLELAIGLLRELDIEGLPLMRAWYVVHRRSLPLLPVHSQFRQFMQERG---Q 297 Query: 301 IYQDLLHREN 310 D L R + Sbjct: 298 AIIDDLARRH 307 >UniRef50_Q1QWP3 Transcriptional regulator, LysR family n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QWP3_CHRSD Length = 296 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 56/300 (18%), Positives = 98/300 (32%), Gaps = 8/300 (2%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M++ T L F R G+ + AA +L L+ SA S + +E L VVLF R R +E Sbjct: 1 MSTHVTFRQLQVFVAVIRGGAVNAAARQLRLSQSATSQALADLERQLGVVLFERLGRRLE 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L ++GR A +LN + + + + + + L + Sbjct: 61 LNDAGRRLLPYAEKVLNGLDELVDAAREPDGELRGTLHVAASATI-GTYLLPMLAGRFIE 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 + P + + V I A++ + + + AP H Sbjct: 120 RHPAVDLQLRLRNTEDVMRDIQRFDADLGLI--EGQCSESRLVSELWCQDEMVVVAAPQH 177 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG----QESILVPDFNTKCQCQI 236 PLA + +L+ I+ E + T + + + + Q Sbjct: 178 PLAARDG-LGVEELQAAQWILREPGSGTRAIFEAAIHPHVERIRVRMELDQHEAIKQAVR 236 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 G G+G L V + + LV + S L+ + Q K N Sbjct: 237 AGFGLGCLSRLSVAGELERGELVALRSPLQLTRSFSLVWHPERYRSPLWQAFKVFLRDNH 296 >UniRef50_A0KIP1 Transcriptional regulator, LysR family n=2 Tax=Aeromonas RepID=A0KIP1_AERHH Length = 300 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 48/305 (15%), Positives = 120/305 (39%), Gaps = 12/305 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F SF+KAA +LG++ + S ++++E L L +R+TR + TE Sbjct: 1 MDQIAAMRTFIKVVECQSFTKAANQLGISVAMTSKLMQQLEESLSTRLLSRTTRQVNPTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+++++++ LL + ++ +Q + +++ + + + H + L + ++++P Sbjct: 61 AGQFYYQRSQALLAELEETHSQLTRNNQQPQGTLKLSVP-MDFGYLHLSPALPLFRERYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + Y+ A++ ++A+ + L + + +R +P + LA Sbjct: 120 DLKLEIE---YSDRRVALVEEGFDLALRIGN--LPDSSLVAKPLAMMRLEVCASPAY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMV---EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P L+ + ++ + + Q + + + +G Sbjct: 174 RRGTPNTPEDLKQHDCLLYTLTQPDWVFKRDGEQLSVRPQGPLRANNGVALTRAACDHQG 233 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWIKKQFAPNGILT 299 I P ++V +A+ LV+ + Q L + + F L Sbjct: 234 IILQPTFIVGDALRSGALVSLLPEWEKGQVGLYALYPHRRFVSAKVRCFIE-FVQERYLA 292 Query: 300 GIYQD 304 Y D Sbjct: 293 PHYWD 297 >UniRef50_B9KVK0 Transcriptional regulator, LysR family n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KVK0_RHOSK Length = 321 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 62/300 (20%), Positives = 110/300 (36%), Gaps = 12/300 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN E+L AF A SF AA+ + L+ A++ I+++E L V L R+TR + Sbjct: 14 MN--IDLEDLRAFVATAEMQSFRAAADSIHLSQPALTRRIQKLEATLGVSLLERTTRRVS 71 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT GR F +A +L+D + I++ V I ++ + Sbjct: 72 LTAVGRDFLPRARRILDDLETSLLSVREIAERRSGLVSIACIPTA-AYYFLPDVISAFTE 130 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +FP + + N V +I+N +A+ I D + + + + A DH Sbjct: 131 EFPAIRFRIFDAGANEVLQSILNREADFGITLLGA--DDPDVTFDPLIEEPFLLACRRDH 188 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTI----NKKVGWLLHGQESILVPDFNTKCQCQI 236 PLA E + + L + + V T+ + + V +T Sbjct: 189 PLARQ-ESVTWADLAAHRFVTVGRTSGNRLIMDLALARANVRPRSFFEVQHLSTSLGLVE 247 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNP-RQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G G+ LP M A +VT + P + ++ + + + Sbjct: 248 AGLGVAALPR-MALPAGPHPSIVTLPLIEPRVTRTVGVVRVPGARRAPAAEQFYQMLLSR 306 >UniRef50_C5BDD2 HTH-type transcriptional regulator AlsR n=2 Tax=Edwardsiella RepID=C5BDD2_EDWI9 Length = 330 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 49/302 (16%), Positives = 99/302 (32%), Gaps = 11/302 (3%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M +L F A F++AAE L ++ +S I+ +E L L R+ RS+ Sbjct: 16 MVMRIEIRHLKYFIAVAEERHFNRAAERLNISQPPLSQQIQSLERELGACLLMRTNRSVS 75 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT++G F ++ ++ + +G + I + A L + Sbjct: 76 LTQAGSLFLKECYSIVGQLEQAAEKAARAHRGETGDLTIGFTSSVPFIPRVAHSLFSYRH 135 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P + + + +++ + +I I L G + + + + H Sbjct: 136 RYPQVHLQMRELNTKQQIEPLVDGKLDIGILRNTLLP--GVLKHRVLQREPLVAVLHRHH 193 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHT------INKKVGWLLHGQESILVPDFNTKCQC 234 PLA + + S L P + T ++ + + V + T Sbjct: 194 PLAQRGQALRFSDLADQPFVFFSRGDGTALYDELLSLLKRAGIVPYITQEVGEAMTIVGL 253 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFA 293 G G+ LP R + + R + P + + LA + Sbjct: 254 ISAGLGVSILPASYTR--IQVDGVCYRALDEPDAYTEVWLAYHRQRPLSAQATALIALLT 311 Query: 294 PN 295 Sbjct: 312 AP 313 >UniRef50_Q122V6 Transcriptional regulator, LysR family n=3 Tax=Comamonadaceae RepID=Q122V6_POLSJ Length = 307 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 66/297 (22%), Positives = 115/297 (38%), Gaps = 11/297 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 F + L F A GSF AAE + L++ A+S I ++ET L LF R+TR +ELT Sbjct: 5 NFDLQQLQGFVAVAERGSFRAAAEHINLSSPALSRRIDKLETILGARLFNRTTREVELTP 64 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 GR F +A L+D + I I+ RV + ++ + +P Sbjct: 65 LGRVFLERARTALDDLESAMLGIADIATHRGGRVTVACVPSA-ALYFLPTVVSNFSQHYP 123 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ V E N V ++++ +++ IG +TL+ I + I + A+ +HPLA Sbjct: 124 GIRVRVVDETMNQVLQSVLSGESDFGIGFMNTLV--PEIAFESIHNDPFVLAMRREHPLA 181 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVG----WLLHGQESILVPDFNTKCQCQILGE 239 + + + I V ++ L+ + V T G Sbjct: 182 RHKS-VNWADVEKESLIAVARSSGNRQLLDDSLTKAGLNPSFAFEVSHVATLLGMVEAGL 240 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS-ATGQVTQWIKKQFAPN 295 G+ +P + LV + P+ R+ L T+H + + Sbjct: 241 GLAAVPRMALASTHA--TLVGLPLRQPQTVRRVGLLTRHGVKLRPAAEMFHQHLRRA 295 >UniRef50_Q0BTM7 Transcriptional regulators, LysR family n=19 Tax=Proteobacteria RepID=Q0BTM7_GRABC Length = 331 Score = 234 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 49/294 (16%), Positives = 99/294 (33%), Gaps = 15/294 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + F+ SF++AA+ LG+ S++S ++ +E + L R+TR + T+ G Sbjct: 34 IDLFRIFSRVVECASFTRAADTLGMPRSSVSAAVQELEGRVGARLLHRTTRKVAPTQDGA 93 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F+++ ++ D + ++ R+RI + + A L +P Sbjct: 94 AFYQRCQRVIADVEDTENLFRQMAAQPSGRLRIDVPGRI-GRLIIAPALPEFLDLYPQIN 152 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I + ++ + + + L G+ IG + +P + LA Sbjct: 153 IDLGV---TDRAVNLVEDSLDCVLRV--GPLSDSGLIARPIGRLALINVASPAY-LARHG 206 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGWL-------LHGQESILVPDFNTKCQCQILGE 239 P A L + + + + W+ L + + V C + G Sbjct: 207 MPQALDDLGQHWAVNYASPSSGRVEDWEWMEDGTLHTLPMRGRVTVNSAEAYIACCLAGL 266 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWIKKQF 292 G+ +P Y VR + L+ LL + Q Sbjct: 267 GLIQIPAYDVRSHLDTGELIEIMPEYRADPMPMTLLYPHRQHLSRRLQIFADWL 320 >UniRef50_C8WV81 Transcriptional regulator, LysR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WV81_ALIAD Length = 305 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 50/300 (16%), Positives = 110/300 (36%), Gaps = 9/300 (3%) Query: 9 NLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYF 68 L F T SF++AAE+L ++ AIS ++ +E L V L R R +++ +GR Sbjct: 7 QLRVFVTVVEENSFTRAAEKLHISQPAISQHVQTLEQRLGVRLIDRGRRRLQVNPAGRIV 66 Query: 69 FRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQIT 128 + A ++L + ++R I + + V + + L Y ++ +K +P Q + Sbjct: 67 YEHAKEILALYRRMERLIADMQEMPAGPVHVGAS-LTYGEYVLPHVIARFRKAYPAVQPS 125 Query: 129 VTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEP 188 V+ + A+ Q +I I +++ + T +P P Sbjct: 126 VSIANTQTIAHAVAVRQLDIGIVEGQDVVED-EVVLTPFAEDEMLVVASPASPWYAEAPD 184 Query: 189 IAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEGIGFL 244 + L + E + T + ++ + + G G+ L Sbjct: 185 RSL--LERATWFIREPGSGTREMTDRLFTQLGIQPRDLVEYTSSQVIKESVAAGLGLACL 242 Query: 245 PDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 ++V + +L T I P + + ++ + + + ++ + +G Sbjct: 243 SRWVVARELAWGMLRTLPIPCAPVKRTFSIVTPKSAFETKASKLLYSFLMEHGSPENPSL 302 >UniRef50_A5VFC0 Transcriptional regulator, LysR family n=2 Tax=Proteobacteria RepID=A5VFC0_SPHWW Length = 315 Score = 234 bits (598), Expect = 3e-60, Method: Composition-based stats. Identities = 58/302 (19%), Positives = 102/302 (33%), Gaps = 11/302 (3%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 N +L F A F +AA+ LG++ +S I+ +E L V LF R++R + L Sbjct: 9 NGSMDLRHLRYFLRVADEMHFGRAAQRLGISQPPLSKQIRALEDELGVKLFDRTSRRVRL 68 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE+GR F +A L R R+ + AR L ++ Sbjct: 69 TEAGRLFEPEARRALEQADRAARIARLAHSAEIGRLGLGFTTSGPFIPFVARALHRFRRT 128 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAP-DTLLDGGGIDYTEIGAIRWAFAIAPDH 180 +P ++ + + + + +++ Q +I I T + G+ + A+ DH Sbjct: 129 YPDVELILREQGRDEQIEGVLSRQLDIGIVRDYRTPVLPDGVVAQCLQQEEMILAVRDDH 188 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTI------NKKVGWLLHGQESILVPDFNTKCQC 234 LA P+P + LR P ++ T + + T Sbjct: 189 WLARRPQPPRIADLRDEPLVLYGPPNGTGFTEHFFALCEEAGFVPKIAHEARSLATLLGL 248 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G + M R + +V R P S L+ ++ Sbjct: 249 VSAGFGPTIIAQSMARLHVDN--VVNRSFAAPSPSSLWLV--HGEELSPTGAAFRRTILE 304 Query: 295 NG 296 Sbjct: 305 ER 306 >UniRef50_B1YXM2 Transcriptional regulator, LysR family n=3 Tax=Burkholderia cepacia complex RepID=B1YXM2_BURA4 Length = 302 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 56/302 (18%), Positives = 109/302 (36%), Gaps = 10/302 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +LLAF AR GS S AE L ++ A++ ++ +E L +VLF R R + LTE Sbjct: 1 MNFTHLLAFYEVARAGSISAGAERLHVSQPAVTREVRELEDRLGIVLFDRMPRGVALTEG 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + A+ + ++ + ++ ++I + L + + P Sbjct: 61 GKLLYEYASRIFTLADTAEKELAELAGLGSGHMKIGASGTL-GVFFVPEAIAAFNARHPR 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I +T V + + + IG + D + IG+ A A HPLA Sbjct: 120 VAIDLTVTNTERVEAGLHD--LSFTIGFIEGPFDDSILHARRIGSDEIAVVAAAGHPLA- 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVG----WLLHGQESILVPDFNTKCQCQILGEG 240 + L IM E + T L + + V + + Sbjct: 177 -GTKVRARDLVDRTVIMREPGSGTRAIIEESYRRAGLEIEPLMSVSHTEAIKRMLLSQHA 235 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWIKKQFAPNGILT 299 + ++ V + + + L ++ + R + + + + +Q + A + T Sbjct: 236 LAYISTLSVADELRRGELAIVEVEDMRIVRPLHMVWAKGRSLSPSSQALFDLVASGALNT 295 Query: 300 GI 301 I Sbjct: 296 AI 297 >UniRef50_C6E9D5 Transcriptional regulator, LysR family n=8 Tax=Desulfuromonadales RepID=C6E9D5_GEOSM Length = 305 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 96/299 (32%), Gaps = 12/299 (4%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L F A GSFSK AE +T S +S I +E+ + L R+ + TE Sbjct: 1 MNLKQLEVFIKVAESGSFSKGAEATFITQSTVSQHISALESEFGMKLLDRTGKGALPTEG 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ +A L+ I + EA + I + L +L +FP Sbjct: 61 GKILLERARKLVEYAKEIPVALARFKGIEEAELNIA-GSSIPGEYMIPAALPLLISRFPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 I + V ++ + + + +D+T + H A Sbjct: 120 VTIVLLQGDSRDVLRKLMAEEVEFGVVGGR--FEEESLDFTPLAKDELVLIAPAGHRWAK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHG-------QESILVPDFNTKCQCQIL 237 I + +L P ++ E + T L + ++ + + I Sbjct: 178 KSR-ITKEELMAEPFVLRETGSGTGRATAKALREAGLDPAKLKVAVHLGSNEAVKRAVIA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA-TQHSATGQVTQWIKKQFAPN 295 G G+ ++ V+ + Q LV ++ LA + K+ Sbjct: 237 GIGVSYVSAVSVQRELEQGSLVQVRVAEVEIKRDFFLATRKGRELSPAAIAFKEIMIEM 295 >UniRef50_Q13L83 Transcriptional regulator, LysR family n=7 Tax=Proteobacteria RepID=Q13L83_BURXL Length = 302 Score = 234 bits (597), Expect = 4e-60, Method: Composition-based stats. Identities = 56/298 (18%), Positives = 104/298 (34%), Gaps = 15/298 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 L AF A SFS AA LG++ SA+S+ ++ +E LDV LF R+TRS+ LTE+G Sbjct: 6 LSELTAFVAIAHQRSFSAAARTLGVSPSALSHAMRGLEARLDVRLFNRTTRSVALTEAGE 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 R+ + D + +RI ++ +L +P Sbjct: 66 QLLRRVGPAIADLEDAVNEAASARNRPSGSIRISASESA-ARPLVQHVLPGFLATYPDIH 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAI-RWAFAIAPDHPLAFV 185 + + I+ + + I + + T G R+ +PD+ +A Sbjct: 125 VEFVVDT---RLVDIVADGFDAGIRVLQDVPRD--MIATRFGPDMRFIAVASPDY-VARN 178 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKV------GWLLHGQESILVPDFNTKCQCQILGE 239 +P A L + I + + + G + + + + N + + G Sbjct: 179 GKPKAPHDLARHRCIRFRFESGALYRWDLEYRGKGASVDVDGPMTLGNLNLMVEAALAGI 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNG 296 GI ++ D + E + LV + L + + + Sbjct: 239 GIAWVSDQLAAEYLASGRLVQLLAEWSPSFPGLCLYYPANRHPPTALRLFAQSVREWA 296 >UniRef50_B9JQG7 Transcriptional regulator n=6 Tax=Proteobacteria RepID=B9JQG7_AGRRK Length = 305 Score = 233 bits (596), Expect = 5e-60, Method: Composition-based stats. Identities = 62/296 (20%), Positives = 127/296 (42%), Gaps = 5/296 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E L +VL RS + T++ Sbjct: 4 FTLHDLQCFDAVVRSGGFQPAAAMLHRSHPAVFAAVAKLERQLGLVLLDRSGYRVRATDA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E + + I L P+ LL Q P Sbjct: 64 GLSFHRRAQSLLRELEGLRAHAAQLSMGEETDIHVVIGDLCPRPEVLG-LLGRFFAQCPG 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E G W+ +I+ +A++ + + ++ ++ + + +AP Sbjct: 123 TRLHLHFEAVGGPWERLIDGEADLILHWVEK--SDSRAEWVDLCNVPFIPVVAPGFLPKR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + +PI Q+ + ++ DTA ++ +++ G +VPD K + + G G G + Sbjct: 181 IKQPITPDQMHTFTQCVIRDTARHSPQQDYFMIEGAPQCMVPDQGMKKEIILQGLGWGHM 240 Query: 245 PDYMVREAMTQSLLVTRQ-IHNPRQDSRMLLATQHS-ATGQVTQWIKKQFAPNGIL 298 P +++ E + L + H P + +++A + G ++ + + Sbjct: 241 PGFLIEEELRDGRLQSIAGRHLPGRTEELVVARRRDQPQGPISNRLWAYIQREAPI 296 >UniRef50_C4GLH6 Putative uncharacterized protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GLH6_9NEIS Length = 289 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 55/293 (18%), Positives = 103/293 (35%), Gaps = 8/293 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F A+ FS+AA +LG+ S +S I +E L + LF RSTR +ELT Sbjct: 1 MDYLNEMALFVEVAQANGFSRAAAKLGMPQSTLSRRIAALEDALGLRLFNRSTRRLELTG 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G Y+ +A ++ + + +D + + + +R+ + + A LL ++P Sbjct: 61 AGAYYLERALPIVAEARLLHGALDEMRETVRGALRVSLP-VDMAYNMVAPLLPEFAARYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ +I ++A+ L T + AP + LA Sbjct: 120 DLRVDFDVTP---RKVDLIGEPFDLAVRT--GKLPDSDYIATPLAEFSGCLYAAPGY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT-AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIG 242 EP + L + + D + Q Q +G GI Sbjct: 174 QRGEPQSPDDLAAHECLRFSDGLWTVQRGSERVTVQPQSRFGANSPGMLRQMAAVGLGIA 233 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 LP+ +VR+ + Q L + + + T + Sbjct: 234 LLPEILVRDDVAQDRLKAVLPDWQSEKTPVHALTATRLLTANVRAFIGFLREK 286 >UniRef50_Q3KDQ1 Putative LysR family transcriptional regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KDQ1_PSEPF Length = 301 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 110/304 (36%), Gaps = 14/304 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + +F GS ++AA +LG S +S I ++E L ++ R R LTE+G F+ Sbjct: 1 MQSFVMVVDTGSITEAARQLGTAKSMVSQRIAQLEKRLGSIVLER-GRQARLTEAGEVFY 59 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 R +L++ + + + +R+ + ++ ++ +L ++P ++ + Sbjct: 60 RYCVRILSEVEEAEDAVLAFQSSLRGSLRLAAP-MAFSIRYLTPILSSFAVRYPELRLDI 118 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 ++ + + + AI + L + I A R +PD+ LA P Sbjct: 119 E---FDDRHVNLHEERYDAAIRIGE--LPDSSLVAKTITANRHIICASPDY-LAAHGTPQ 172 Query: 190 AESQLRLY---PNIMVEDTAHTINKKVGWL--LHGQESILVPDFNTKCQCQILGEGIGFL 244 +L + + E L + + + + + G G+ L Sbjct: 173 TPQELSEHFAMLYVNREPHGMWTLPVNNALESFRVRCRMRTNNGHQLMEAAKAGMGLAIL 232 Query: 245 PDYMVREAMTQSLLVTRQ-IHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQ 303 P ++ +A+ L + PR + + + Q + +++ Sbjct: 233 PTFLAAQAIVDGELQEVLAPYAPRGGNISAVYRRSQRASPKLQALTDFLCEQIGNPPVWE 292 Query: 304 DLLH 307 LL Sbjct: 293 QLLG 296 >UniRef50_Q4K3G6 Transcriptional regulator, LysR family n=12 Tax=Pseudomonas RepID=Q4K3G6_PSEF5 Length = 315 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 48/300 (16%), Positives = 110/300 (36%), Gaps = 10/300 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 T L F S+S+AA+E+ LT A+S I+++E + LF + + +TE Sbjct: 2 RLTLRQLQIFNEVCDLRSYSRAADEMSLTQPAVSLQIRQLEELIGQPLFDYVGKKLYMTE 61 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 + R + D+ + ++ + ++ ++++ + L K+Q P Sbjct: 62 AAEALQRASRDIFGRLENLDMQLSDMQGSLQGQLKLAVESS--AKYFVPHLFAAFKRQHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + +T + V + +N+ ++ I + + +++ P+HPL+ Sbjct: 120 EVHLQLTVVNRSQVIRRLSDNRDDLVIMSM--VPQDMELEFLPFLNNPIVAVAPPEHPLS 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGE 239 + P+ L Y ++ E + T + +H + + V + +C G Sbjct: 178 HMG-PLRLQDLEPYTLVLREQGSGTRLACEEYFKEKRVHFTQILEVSSAEAQRECVRAGL 236 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 G+ L + + + L+ + P S L+ + V + Sbjct: 237 GVALLTRHALNLELATGGLIELPVEELPLLRSWCLVQAKAKRLSPVAHAFLGFIRSERVQ 296 >UniRef50_B7RZY7 LysR substrate binding domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZY7_9GAMM Length = 318 Score = 233 bits (596), Expect = 6e-60, Method: Composition-based stats. Identities = 67/300 (22%), Positives = 124/300 (41%), Gaps = 12/300 (4%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 MN + L AF T A+ SF++A+E L L+ A+S IK ME LF+RSTRS++ Sbjct: 21 MN--VSLRQLRAFVTLAQSQSFAEASELLHLSQPALSVAIKNMEQETGGSLFSRSTRSLQ 78 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 L+ GR F A LL D+ + + ++R+ + + L ++ Sbjct: 79 LSPEGRQFLPVARRLLADWDQAFDDLGRAFNLQQGKIRVAVMPS-FAMNQFPEALAPFQR 137 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDH 180 ++P I+V V V DA+ Q + I +D G+++T + RW + P Sbjct: 138 EYPDINISVEDVVMESVIDAVREGQVELGITFEPDQMD--GLEFTPLFTDRWIALVHPKS 195 Query: 181 PLAFVPEPIAESQLRLYPNIMVEDTAHTIN----KKVGWLLHGQESILVPDFNTKCQCQI 236 PLA + ++ + L P I + + + N + + T + Sbjct: 196 PLAARKK-LSWTALMEEPFIAMNRGSWSRNTTEKALSEAGVTPTRLLEANQLATIGRMVS 254 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA-TQHSATGQVTQWIKKQFAPN 295 +G G +P + R+ M ++ + I P + ++ + + + Q + + Sbjct: 255 VGLGTAVVPQ-LCRQQMESLGILCKTIGRPSIERQVGIFTRKRRSLSGAAQALIAHLLEH 313 >UniRef50_Q3IZC5 Transcriptional regulator, LysR family n=41 Tax=Rhodobacterales RepID=Q3IZC5_RHOS4 Length = 313 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 54/309 (17%), Positives = 109/309 (35%), Gaps = 14/309 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 ++ + AF G F+ AA ++G++ SA+S + +E L L R+TR + T Sbjct: 12 AMDRLTEMEAFAMVVDQGGFTDAARKMGISKSAVSKHVSALEARLGARLLNRTTRRVSPT 71 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 E G ++ +A +L D + ++ +R+ + + A +L + Sbjct: 72 EIGLAYYDRARRVLTDAGEADALVTSMQTAPSGHLRLSV-ATDFGVALLAPILAEFLLDY 130 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P + T V N +I+ ++AI D L+ + ++ +P + L Sbjct: 131 PDITV---TMVLNNRSVELISEGFDMAIRVGD--LEDSSLRARKLTETTRRMIASPGY-L 184 Query: 183 AFVPEPIAESQLRLYPNIMVEDTAH------TINKKVGWLLHGQESILVPDFNTKCQCQI 236 P+ L + + AH + + V D ++ + + Sbjct: 185 QRHGRPMKIDDLTDHRLLYHSTQAHGNVWRLLSPSGEPRQVRAPGFLTVNDGHSLLKAAV 244 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPN 295 G GI LP+++ EAM L+ P + + T + Sbjct: 245 SGLGIAHLPEFLFAEAMRAGLVEEVLPDLPVETLGIHAIYPAGRFTQPKVRAFIDFLVRR 304 Query: 296 GILTGIYQD 304 + G + Sbjct: 305 FLEKGPIGN 313 >UniRef50_A5G323 Transcriptional regulator, LysR family n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5G323_ACICJ Length = 313 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 51/307 (16%), Positives = 96/307 (31%), Gaps = 14/307 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F A GSFS A + + IS I +E L V L R+TR + LTE Sbjct: 1 MDQLSLINTFIRVAERGSFSAVARDFNTSQPVISRQIAALEDQLGVRLIQRTTRRLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ + A +++ A + + + +VR+ + + + A L + P Sbjct: 61 DGQTYLEHAKAVVDAMDAANASVGSARKTPTGQVRLGVPTAVGL--YLAARLPEFFARHP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + +G +D I ++ I + + +G +P + +A Sbjct: 119 EISLDLKM--RDGAFDLIEEG-LDLVISIAEAT--QASVITRVLGTATSVLVASPAY-VA 172 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGW-----LLHGQESILVPDFNTKCQCQILG 238 P L + I+ + ++ Q V + G Sbjct: 173 ARGAPETPRDLLKHECIVYTRPGADREWRFARDGVEESVNVQGRFHVDSSEAVRRAARAG 232 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAPNGI 297 GI LP + + L+T ++ T+ I Sbjct: 233 LGIALLPRLTTIDDVAAGRLITVLDAFVPMQVKIHAILPSRRYVPARTRAILDFLREEFE 292 Query: 298 LTGIYQD 304 T Q Sbjct: 293 HTPFLQS 299 >UniRef50_C5AIJ9 Transcriptional regulator, LysR family protein n=4 Tax=Burkholderia RepID=C5AIJ9_BURGB Length = 301 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 56/295 (18%), Positives = 105/295 (35%), Gaps = 15/295 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 L AF A SF AA L ++ SA+S+ ++ +E L V LF R+TRS+ LTE+G Sbjct: 6 LSELTAFVAIAEQRSFRAAARALAVSPSALSHAMRSLEARLGVRLFNRTTRSVALTEAGE 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + L+D + + T VRI + +L ++P Sbjct: 66 RLLHRVGPALSDLESAVDEVSTAQNRPSGSVRINAPETS-ARLLIRHVLPDFLLRYPDIH 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAI-RWAFAIAPDHPLAFV 185 + T+ + D + + I A D + + G R+ +P + LA Sbjct: 125 VEFVTDT--RLIDIVAEG-FDAGIRALDDVPRD--MIAVRFGPDMRFIAVASPAY-LARH 178 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWL------LHGQESILVPDFNTKCQCQILGE 239 P P + L + I + + + L L + + + N + + G Sbjct: 179 PAPERPADLMQHRCIRHRFESGALLRWDFQLDGKTCSLDVNGPLTLGNPNAMIEAALAGI 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFA 293 G+ ++P+ + E + L+ + L + + + Sbjct: 239 GVAWVPESQIEEHLASGRLIALLDAWSVPLPGLALYYPANRHPPAPLRLFTQAVR 293 >UniRef50_B5WR38 Transcriptional regulator, LysR family n=2 Tax=Betaproteobacteria RepID=B5WR38_9BURK Length = 309 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 49/298 (16%), Positives = 99/298 (33%), Gaps = 9/298 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A F++AAE LG+ +S I+R+E + LF R +R +ELTE+ Sbjct: 1 MELRHLRYFVVVAEELHFTRAAERLGIGQPPLSLQIQRLERDIGATLFRRLSRGVELTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A +L + +S+G +R+ Y +++ + + P Sbjct: 61 GVLLLDNARHILALVDRTCTDVQRLSRGEIGHMRVGFAGATYFLPLVPAIIREYRTRHPD 120 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + D ++ + + A ++ +D + + HPLA Sbjct: 121 VVLSPEQSNTPSLVDGLLEGRVDAAF-IRPPIVSADELDVELLVKEDMVVVLPHSHPLAR 179 Query: 185 VPEPIAESQLRLYPNIMVEDTAHT------INKKVGWLLHGQESILVPDFNTKCQCQILG 238 EP+ S L ++ + + P + G Sbjct: 180 AGEPVPLSALAEETFLLFPRAIGAGLYDAITSACQRAGFLPRLGQEAPQIVSIAPLVGAG 239 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 G+ +P + + +V I + + LA + V + + Sbjct: 240 FGVSIVPRSTTQ--IQTDEVVYLPIAGNAPKAPISLAWRRHNPSPVVRLFRAVAREMA 295 >UniRef50_A8I6W2 Transcriptional regulator n=4 Tax=Proteobacteria RepID=A8I6W2_AZOC5 Length = 315 Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 101/291 (34%), Gaps = 14/291 (4%) Query: 11 LAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFFR 70 F GSFS AAE LG ++ S + R+ET L V L R+TR++ TE G+ ++ Sbjct: 20 RMFVAVLDTGSFSAAAERLGTSSGQASKLVSRLETELGVQLLKRTTRALSPTEVGQAYYE 79 Query: 71 KATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITVT 130 + LL++F A+ + S R+R+ + + LL + FP Q+ V+ Sbjct: 80 RIKPLLDEFEALDASVRNASGAPAGRLRLSAP-MSFGHIQLMPLLLDFARAFPQIQLNVS 138 Query: 131 TEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPIA 190 ++ +++ + AI + ++ + + +P + LA P Sbjct: 139 ---FSDRLVNVVDEGFDAAIRI--GSPRDSSLIARKLCDSQIMWLASPAY-LASHGTPQT 192 Query: 191 ESQLRLYPNIM---VEDTAHTI---NKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 L + I+ + VG + + G GI + Sbjct: 193 PQDLVRHACIIDDNFPEPLVWRFQTPDGVGDAVTVSGRMRFSSGEACLAAAEAGLGIARM 252 Query: 245 PDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAP 294 P ++ + +V P L + + A Sbjct: 253 PTFIAGPKLKAGTVVPLFRDLMPPARGVYALYPPGRHLAVKVRALVDFLAN 303 >UniRef50_A1TZI9 Transcriptional regulator, LysR family n=2 Tax=Alteromonadaceae RepID=A1TZI9_MARAV Length = 298 Score = 233 bits (595), Expect = 8e-60, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 108/300 (36%), Gaps = 9/300 (3%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + F A GSF++AA++L +T + +S I +E LD L R+TR + LT++G Sbjct: 6 LVAMNIFRRVAELGSFTRAADDLDITAATVSKHIAFLERDLDTRLINRTTRRMSLTDAGL 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 F ++ LL++ + +R+ + + + H + ++P + Sbjct: 66 AFLKRTQALLDELEDAELEARGFQAEPRGLIRLNVP-MSFGLTHITGAIDSFLARYPEIE 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 I + + ++ ++AI + L + + R AP + L P Sbjct: 125 IDLQ---LSDRMVDLVEQGVDMAIRI-RSTLADSSLLAKPLRQSRNIVCAAPGY-LEHSP 179 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGW-LLHGQESILVPDFNTKCQCQILGEGIGFLP 245 + L +M +G + + Q + G G+G +P Sbjct: 180 AIHTPADLAAQNCLMFNLHDRPRVWALGDKEVVVSGNYRTDSSLAIRQSLLNGAGVGLVP 239 Query: 246 DYMVREAMTQSLLVTRQIHNPRQD-SRMLLATQHSATGQVTQWIKKQFAPNGILTGIYQD 304 ++V++ + LV P Q + L + + + + + Y + Sbjct: 240 RFLVQQDLANGALVALLSEYPPQTYTVFALFPPGRKQPTKVRLLLEHIDQH-LGDKPYWE 298 >UniRef50_A6EVZ7 Probable transcriptional regulator n=1 Tax=Marinobacter algicola DG893 RepID=A6EVZ7_9ALTE Length = 304 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 62/294 (21%), Positives = 114/294 (38%), Gaps = 16/294 (5%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + F+T GSFSKAA LT SA S I R+E L L RSTR ++LT GR Sbjct: 9 LAAMEIFSTVVEQGSFSKAARVCRLTPSAASKAITRLEKRLGTKLIHRSTRQMQLTAEGR 68 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 +F+ + +L+D ++ + S +RI + + ++ ++P Sbjct: 69 WFYERCRHILSDLEEAEQGASS-SVEPTGHLRITASFPV-GHGFLIPIVTKFLARYPGIT 126 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + ++ ++ ++AI + L + ++G R AP++ L Sbjct: 127 LELS---LTDQVVNLLAEHTDVAIR--NGPLGNSNLVARKLGETRMVIVGAPEY-LERRG 180 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVGW-----LLHGQESILVPDFNTKCQCQILGEGI 241 P+ +LR + + + HT + + L Q S+LV D T + + G G+ Sbjct: 181 VPVTLEELRTHNRLGFNFSRHTATWPLTFDGEQTELAPQGSLLVSDGETMRKMAMEGVGL 240 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPR--QDSRMLLATQHSATGQV-TQWIKKQF 292 L ++V E + Q LV + ++ + + Sbjct: 241 ARLTRFLVDEDIRQGRLVPVMEEHNPGDREEVHAVFLGQGRLMPGRVRVFLDFL 294 >UniRef50_A9FTD5 Transcriptional regulator, LysR family n=3 Tax=Myxococcales RepID=A9FTD5_SORC5 Length = 343 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 50/297 (16%), Positives = 110/297 (37%), Gaps = 13/297 (4%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 + ++ FT + GSF+ AA +G+ S +S I +E+ + L R+TR++ LT+ GR Sbjct: 47 LDEIVLFTRVVQGGSFTAAATAVGMPKSTVSRKISDLESRVGARLLQRTTRTLSLTDVGR 106 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 ++ ++ + + + +R+ ++ + FP Q Sbjct: 107 VYYEHCVRIVAALEEAELAVSQLQSTPRGLLRVTAP---LAFSVLGPIVAEYLRLFPDVQ 163 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + + V ++ + ++A+ A T + +GA+R AP+ A + Sbjct: 164 VDL---VCTDRRVDVVEERFDLALRAGAT--PDTSLVARRLGAVRRRLVAAPEVKRA-LG 217 Query: 187 EPIAESQLRLYPNIMVEDTAHTINKKVG---WLLHGQESILVPDFNTKCQCQILGEGIGF 243 EP ++L +P I+ + + G + ++V D+ G G+ Sbjct: 218 EPNDIAELADHPCIVFAPEGSSWELRSGPKIAEITVHPRLVVNDYEMLRSVARAGFGVAL 277 Query: 244 LPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPNGILT 299 LP+Y+ E + L+ + + + +L+ Sbjct: 278 LPEYLCAEDLAAGRLMPVLASWSAPEVPVFALYPSTRHLSPKVVTLLDLLRQRLVLS 334 >UniRef50_Q316J6 Transcriptional regulator, LysR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. G20 RepID=Q316J6_DESDG Length = 294 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 67/292 (22%), Positives = 114/292 (39%), Gaps = 8/292 (2%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 +F+ + L AF AA GSFS AA LG SA+S + +E L V LF R LT Sbjct: 1 MFSLDQLEAFRAAAETGSFSAAARRLGKVQSAVSTAVSNLEIDLGVELFDRRGHKAVLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G R+A +L + + R I+ G EAR+ + ++ + +L ++FP Sbjct: 61 AGETLLREAWTVLGECDRLLERAVAIAGGEEARLSLAVDDAVPVDWFV-DVLAAFGERFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ V + +A++ I P + ID +G + + A Sbjct: 120 FVQLETYYGAMGDVAQMVGEGRADLGIVMPVSGTPAA-IDAVLVGHMPYVPVAAAH-HPL 177 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 + L Y +I+V + T +++ W HG L Q + G Sbjct: 178 AALPAVGRRDLMRYRHIVVA--SRTGDREPDWAGHGGPVWLQESTYATLQLVLRHAGWAS 235 Query: 244 LPDYMVREAMTQSLLVTRQIHNPR---QDSRMLLATQHSATGQVTQWIKKQF 292 LP ++V + LV + ++ +A G W++K+ Sbjct: 236 LPGHLVDRHVRAGRLVVLPLDFHAVKFAAPVFVVRRPGAAQGVAGIWLRKEL 287 >UniRef50_C6J455 LysR family transcriptional regulator n=2 Tax=Bacillales RepID=C6J455_9BACL Length = 307 Score = 232 bits (594), Expect = 8e-60, Method: Composition-based stats. Identities = 59/301 (19%), Positives = 110/301 (36%), Gaps = 16/301 (5%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 LL A +FS+AA++L + ++S + ++E L V LF R+T ++ELT + Sbjct: 1 MELRQLLYTLKIAEEKNFSRAADKLHIAQPSLSQQLSKLEQELGVKLFQRNTSTVELTYA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F A +++ +++ +D ISQ RV + + +L K +P Sbjct: 61 GASFIAHAQKIMDAVAQLRQEMDDISQLRAGRVVVGSMPIT-GSHLLPYVLPAFKASYPN 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+T+ + + ++ L + Y IG A+ PDHPL Sbjct: 120 IQVTLLEDTSLNLEKLTAEGGTDL--SLLSLPLLEPTLSYEPIGEEIIDLAVPPDHPLTK 177 Query: 185 VPEP----IAESQLRLYPNIMVEDTAHTINKKV----GWLLHGQESILVPDFNTKCQCQI 236 P + QL P I+++ + T Sbjct: 178 TPGVLEQGVEMKQLENEPFIVLKKGQGFRKMTADLCREAGFEPNVVFESNNIETVQSLVA 237 Query: 237 LGEGIGFLPDYMVREAMTQSLLVT--RQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFA 293 G GI +P ++ R +S L+ + P +++A + + + + F Sbjct: 238 AGMGITLVPRFIARA--KRSELIPAYLPLAAPAPSRTLVIAYRKGRYLSKAAEAFIETFK 295 Query: 294 P 294 Sbjct: 296 K 296 >UniRef50_B9ZSB8 Transcriptional regulator, LysR family n=4 Tax=Bacteria RepID=B9ZSB8_9GAMM Length = 340 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 10/308 (3%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 T L F R GSF++AAEEL LT +S IK++ T L + LF R TE G Sbjct: 30 TLRQLQVFEAIVRLGSFTRAAEELHLTQPTVSIQIKKLSTALGLPLFEYVGRKAFPTEVG 89 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 + ++L ++ ++ + R+R+ + +L +++P Sbjct: 90 LLLYDTCREMLGALTNLEMKLAEMHGLKRGRLRLAVITT--AQYFAPSILGQFARRYPDI 147 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 ++++ ++ V + + NN ++ I + + DHPL Sbjct: 148 ELSLEVSNFDRVLERLSNNDDDLYI-IGHVPERLTDVAVHPFAPNPLVVMASRDHPLVGR 206 Query: 186 PEPIAESQLRLYPNIMVEDTAH----TINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 I +L +M E + T+ + + + Q I G GI Sbjct: 207 RN-IPLKELEQETFLMREPGSGIREATLKLFQEHGISPPVRMELGSNEAIKQAVIGGLGI 265 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSA-TGQVTQWIKKQ-FAPNGILT 299 L + + + + + + + + V Q + Sbjct: 266 AVLSLHTLSAEGAEGPVALLDVEHFPIHRQWHIVYPKKKVLSVVAQTFLDFAIQDEARVR 325 Query: 300 GIYQDLLH 307 +DLL Sbjct: 326 AQVEDLLA 333 >UniRef50_C9RA29 Transcriptional regulator, LysR family n=1 Tax=Ammonifex degensii KC4 RepID=C9RA29_AMMDK Length = 295 Score = 232 bits (594), Expect = 9e-60, Method: Composition-based stats. Identities = 55/292 (18%), Positives = 100/292 (34%), Gaps = 11/292 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A GSFS AA+EL LT A+S I +E L V L R R + LTE+ Sbjct: 1 MKLSWLKTFVLIADKGSFSLAAKELDLTQPAVSKHIALLEAHLGVKLIDRDQRQVTLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ A ++ ++ + +S + + I + + +L++ ++++P Sbjct: 61 GQALLPYARTIIKTLEEAEQAVRNLSASVRGTLNIGAS-TIPGHYVLPQLIRRFRERYPQ 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 Q+ + VW ++ ++ I +GA ++ + HPLA Sbjct: 120 VQVNLEIADTEKVWQQVLEHK--ICLGAVGAPPSSPALEAVPFATDEIVLVLPTPHPLAG 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLH---GQESILV----PDFNTKCQCQIL 237 E I L + E + T L E + V Sbjct: 178 -KEVIPLELLPQLELVGREKGSGTRQTVEERLRQKGFPPERLRVVAEFSTTEAVLAAVEA 236 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIK 289 G G F+ + + L ++ + ++ L T + Sbjct: 237 GLGGAFVSRWAAESRRHKGNLCICRLEGISFERKLYLVYSRHRTLPHLARLF 288 >UniRef50_C9YBM2 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=C9YBM2_9BURK Length = 309 Score = 232 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 56/294 (19%), Positives = 108/294 (36%), Gaps = 13/294 (4%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + L F A F KAA L ++ +S I+++E GL V LF R+ RS++L Sbjct: 10 SMRLETRQLRYFVAVAEELHFGKAAVRLHMSQPPLSQQIRQLEEGLGVTLFERTQRSVKL 69 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T +G+ F +A + L+ + ++G +R ++ K++ Sbjct: 70 TYAGQVFLAQARNALSKLEEAVDVVRAAARGEAGFLRCGY-TAASAYAVIPSVMHAFKQR 128 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 +P ++ + + + I + +I + P L + ++ AI +HP Sbjct: 129 YPLVEVALRESLSGDQYRDIREGRLDIGLVRPFGALPD--LATEKLIEENLIVAIPSEHP 186 Query: 182 LAFVPEPIAESQLRLYPNIMV-EDTAHTINKKVGWLLHGQESI-----LVPDFNTKCQCQ 235 LA + L+ P + + + V LL G++ + + Sbjct: 187 LAQQ-RIVDIHDLQSQPFVGFSSYGSQYFHDMVENLLGGEKVVPKLVQRATQPHAVIALV 245 Query: 236 ILGEGIGFLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWI 288 G G+ +PD R M +V R +H R + L + + Sbjct: 246 SAGLGLAIVPDASARVHMD--RVVYRPLHASRLPRPELHLCWRRENISPLISNF 297 >UniRef50_C5BRE8 Transcriptional regulator, LysR family n=1 Tax=Teredinibacter turnerae T7901 RepID=C5BRE8_TERTT Length = 342 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 92/299 (30%), Gaps = 13/299 (4%) Query: 3 SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 ++ + F F+ A+ +L L+ A++ I +E+ L V L R+TR + T Sbjct: 43 AMDQLHLMQVFVAVVDEQGFAAASRQLRLSPPAVTRAIATLESRLGVKLLHRTTRHVRPT 102 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 ++G +++ A +L + ++ R+ I L ++ K++ Sbjct: 103 DAGVHYYDDAHRILREVELANESAQGVNSEPRGRLSITAPVLFGQKYVLPGVV-EYLKRY 161 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 + V+ ++ ++ I + L + +G + +P + L Sbjct: 162 RHTSVD---AVFLDRVVNLLEEGFDVGIRIGE--LADSSMRARHVGNVNLILVASPAY-L 215 Query: 183 AFVPEPIAESQLRLYPNIM-----VEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P L+ + I H + L + V Sbjct: 216 KAEGIPQTPDDLKNHTLISSNSNNFTQNWHFRCEGKNLSLRITPRLQVTTNQAAIDAAAA 275 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPN 295 G GI + Y V + + L Q + + + + + Sbjct: 276 GLGITRVISYQVADYLADGRLKCILDPFCSQPLPIHIVHREDRLSSHKVRAFIELMQER 334 >UniRef50_A3SDT2 Transcriptional regulator, LysR family protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SDT2_9RHOB Length = 297 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 69/299 (23%), Positives = 119/299 (39%), Gaps = 8/299 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L GS AAE L T AIS +K +E LF RS +ELT Sbjct: 1 MKLDQLNVLRAVVETGSVKTAAERLNRTQPAISQALKALEFQTGTELFDRSGYRLELTPV 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ + ++ +L + + + I +G E + I ++ +L L+ FP Sbjct: 61 GKRVYLQSLRVLTEAEDLGQLIHHFEKGQEETITIAVDATTNLNA-LTPVLCKLQTGFPE 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTL-LDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + EV +G +A+ A IAI ++ L+ G DY +G +P A Sbjct: 120 TRVVLRPEVLSGAIEAVKTGTAAIAISPMSSVMLEEEGFDYIPLGTSTLRNVTSPS-LWA 178 Query: 184 FVPEPIAESQLRLYPNIMVEDTA--HTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + P + LR + ++ D+ + + + GQ V D TK I G G Sbjct: 179 EMDNPKRLADLRRFHQVIASDSGQAGGLFDREIGVQKGQRRWYVSDLQTKKHLLIAGLGW 238 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQ--DSRMLLATQHSATGQVTQW-IKKQFAPNGI 297 G LP++M+ E + Q L + + D + Q + + K+F + + Sbjct: 239 GRLPEHMIAEELKQGRLCEIDLPHTHLAFDVTIYAFRQSKPIVRAVAALLWKEFEAHAM 297 >UniRef50_A4FE82 LysR-family transcriptional regulator n=5 Tax=Actinomycetales RepID=A4FE82_SACEN Length = 294 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 48/295 (16%), Positives = 99/295 (33%), Gaps = 11/295 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A F++AA+ L + S +S +I+ +E L LF R+TR++ LT + Sbjct: 1 MELRQLEYFVAVAEECHFTRAAKRLHVAQSGLSASIRSLERELGARLFHRTTRNVTLTAA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G +A L + + + + + + I Q L+ +L P Sbjct: 61 GHALLHEARRALCAVDSARDAVAAVRGLLRGELSIGTLQCLHVVD-LPPVLAGFVTAHPG 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + + + + + ++A G+ + A A DHP+A Sbjct: 120 IEVRLRQGGSGDLAEQVRAGRLDLAFAVRPARCPD-GVLVHSLDTEPLVLACAGDHPMAE 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + +L P + T + L + + ++ V D ++ + G G Sbjct: 179 RDR-VDPRELGEQPFVDFHPDWGTRDVVDRVLAETGVERRVALEVTDVHSLLELVACGLG 237 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 I +P + + +P +A T + + Sbjct: 238 IALVPRSFSA---KNGQVRFVPLASPAPTWET-VAITSDPTSTAAAALLRDVQEA 288 >UniRef50_C6IVL6 Transcriptional regulator YwqM n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6IVL6_9BACL Length = 302 Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 108/297 (36%), Gaps = 9/297 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F GSF++AA++L S+++ I+ +E + + LF R R I LT++ Sbjct: 1 MESRHLFTFLVVVEAGSFTRAAQQLDYAQSSVTAQIQALEAEIGLPLFDRIGRKIVLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR A ++ + + + + + ++I + L + +++ ++++P Sbjct: 61 GRRLLPYAQEI-AKIHEMAKNALHPAAEMAGSLKIGAPESLAAFR-LPEVIRHYRQRYPL 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 QI + + D + + + ++A ++ + + A DHPL Sbjct: 119 VQIVLKPGQCWELRDLVRSGELDVAFLLQPE-VEDRDLQIETLVHEPMALVAPADHPL-R 176 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + QL+ + E +L + ++ QC + G G Sbjct: 177 HEAEVVPDQLKDQTILHTESGCSYRTLFERYLNSHGVFPDPNLEFWSIEAIKQCVMSGLG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQI-HNPRQDSRMLLATQHSATGQVTQWIKKQFAPNG 296 + FLP VR + + LV ++ + L + + Sbjct: 237 VSFLPLVTVRSELAEGKLVKLNWNDESQRVATQLALHRKKWRSPALEQFVLMIREQA 293 >UniRef50_B9YYZ1 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=B9YYZ1_9NEIS Length = 314 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 73/296 (24%), Positives = 120/296 (40%), Gaps = 9/296 (3%) Query: 1 MN-SIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSI 59 MN + E G F++AA L + SA+SY + R++ L V L R + Sbjct: 1 MNFPRTSLEQWRVLQAIVEHGGFAQAASALNRSQSAVSYNVARLQEQLGVGLLEAEGRRM 60 Query: 60 ELTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLK 119 +LT +G R+AT L+ ++ R + G EA VR+ ++ L T L Sbjct: 61 KLTAAGAALLREATPLIEAALRLEARARALDAGWEAEVRLAVDSLFPTDALLC-ALAGFA 119 Query: 120 KQFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPD 179 P ++ V V +G DA+ +AI G + + AP Sbjct: 120 GHCPDTRLQVHEVVMSGADDALYAGAVELAIVTR----VPSGFMGDWLMDATFVAVAAPG 175 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPL +P+ E LR YP ++V D+ + GW L + V +T G Sbjct: 176 HPLLAAGQPLGEDDLRRYPQVVVRDSGTRQPRDEGW-LGASQRWTVSSPHTALDVVSAGL 234 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIH--NPRQDSRMLLATQHSATGQVTQWIKKQFA 293 G+LP++ +R+ + LL + R+ S L+ A G T+++ + Sbjct: 235 AYGWLPEHRIRQPLAHGLLRPLPLAQGQQRKSSLYLVNAAAEAAGPATRYLAEGLR 290 >UniRef50_A5EG89 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=A5EG89_BRASB Length = 329 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 114/298 (38%), Gaps = 14/298 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L AF A SF+KAA ++G + IS+TIK +E LDV LF R+TRS+ LTE+G Sbjct: 9 LSAFAAVADTLSFTKAAAQIGCSLPTISHTIKSLEERLDVRLFNRTTRSVALTEAGERLL 68 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 + + I+ +RI + ++ + + L++ ++P Q+ + Sbjct: 69 AEIQPIFEQVDQAIESINAFRDKPVGTLRIAVPRV-FAIRGLGPLIRSFLAEYPDIQLEL 127 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + N I+ N+ + I + + + + +++ +PD+ LA P P Sbjct: 128 AVDDTN---SDIVRNRFDAGIRSGHRVERDMKVI-RVVDDLQFVAVASPDY-LAVHPAPS 182 Query: 190 AESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-------ILVPDFNTKCQCQILGEGIG 242 + L + I A + + Q + ++V DF+ + G GI Sbjct: 183 SPEDLGAHNCIRHRFPADETLQPWVFEQGEQRAEIAVDGSLIVNDFDLALNAALDGVGIA 242 Query: 243 FLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQ-VTQWIKKQFAPNGILT 299 +L + +V + + LV + L Q I Sbjct: 243 YLVEPLVDAHLAEGRLVRVLPDWSSATPGLFLYHPSRRQPPMPLQVFLDFVKRWRIRA 300 >UniRef50_C8SS95 Transcriptional regulator, LysR family n=3 Tax=Proteobacteria RepID=C8SS95_9RHIZ Length = 324 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 65/296 (21%), Positives = 126/296 (42%), Gaps = 5/296 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 FT +L F R G F AA L + A+ + ++E LD+VL RS + TE+ Sbjct: 4 FTLHDLQCFDAVIRTGGFQPAAALLHRSHPAVFAAVAKLERQLDLVLLDRSGYRVRPTEA 63 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G F R+A LL + ++ +S G E+ + + I L P+ +L Q P Sbjct: 64 GLSFHRRAQALLRELEGLRVHAAQLSMGEESEIHVVIGDLCPRPQVLG-MLGRFFAQCPG 122 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ + E G W+ + +++A++ + D +++ ++ + + +AP Sbjct: 123 TRLHLHFEAVGGPWERLFDDEADLILHWVDKG--DARVEWVDLCKVPFIPVVAPGFLPQR 180 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + EPI Q++ ++ D+A ++ L+ G LV D K + + G G G L Sbjct: 181 IQEPITPDQMQALTQCVMRDSARHSPQQNYSLIEGAPQCLVADQGMKKEIILQGLGWGHL 240 Query: 245 PDYMVREAMTQSLLVTRQ-IHNPRQDSRMLLATQH-SATGQVTQWIKKQFAPNGIL 298 P +++ + + L + H P + +++A + G V + Sbjct: 241 PRFLIEDELHDGRLCSIAGRHMPGRTDELVVARRRDRPHGPVANRLWDHIQQEAPA 296 >UniRef50_A1VGW8 Transcriptional regulator, LysR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VGW8_DESVV Length = 306 Score = 232 bits (592), Expect = 1e-59, Method: Composition-based stats. Identities = 67/310 (21%), Positives = 114/310 (36%), Gaps = 26/310 (8%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 ++ E + AF AAR GSFS AA ELG SA+S I +E L V LF R+ LT Sbjct: 3 YSWEQVEAFVRAARLGSFSAAARELGKAQSAVSTAIANLEADLGVNLFDRAGHLPVLTPE 62 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A LL R T++ G+E R+ + +++L + P L +++P Sbjct: 63 GEALLGDAERLLARGERFGSRAATLATGVEPRLVLAVDELAWGPALV-DRLTGFAERWPD 121 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDG----------------GGIDYTEIG 168 ++ + + + +A++ I P G G+DY G Sbjct: 122 VEMEFLFGIVGDIALMVAEGRAHMGIMVPLADPRGRRVYAEEAWRDAESRLAGLDYFPAG 181 Query: 169 AIRWAFAIAPDHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDF 228 A+ +A HPLA ++ +L + + + + V + Sbjct: 182 AVPALPVVAAGHPLAGR-RAVSPDELEALRQLDITSRGGERPDAL-----SGQVWRVDSY 235 Query: 229 NTKCQCQILGEGIGFLPDYMVREAMTQSLLVTRQIH---NPRQDSRMLLATQHSATGQVT 285 G G +LP+ + + LV + + L+ A G Sbjct: 236 WALRDLVRAGLGWAYLPESLAASDLDAGRLVRLDLAPAGEVWRWPLYLVRDARRAPGPAA 295 Query: 286 QWIKKQFAPN 295 +W+ + A Sbjct: 296 RWLLEALAKA 305 >UniRef50_A0LJJ0 Transcriptional regulator, LysR family n=2 Tax=Bacteria RepID=A0LJJ0_SYNFM Length = 308 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 59/292 (20%), Positives = 109/292 (37%), Gaps = 11/292 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 L F A SF+KAA +L S+IS I+ +E L V LF R + ++LTE+ Sbjct: 1 MELRQLKTFRVVANLLSFNKAAGQLHYAQSSISAQIQILEEELGVQLFDRLGKRVQLTEA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G + A +L+ ++ ++ + I I + L + +L+ +FP Sbjct: 61 GVRLLQYANKILDLVDETNSMVNRVN-EPTGSLTIRIPETL-GVRRLPAVLREFHSRFPR 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ T G+ + ++A ++ ++ +D +G APDHPLA Sbjct: 119 VRLNFITCALEGLDKDLRKGITDLAFLLAES-INAADLDMATLGFEPVVLVAAPDHPLAA 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQE-----SILVPDFNTKCQCQILGE 239 + L I++ + K + +L +E C + G Sbjct: 178 -KRKVHTRDLTGST-ILLSRVDCSYRKVLEQILEQEEVTRFNRFEFSSVEVIKHCVMAGV 235 Query: 240 GIGFLPDYMVREAMTQSLLVTRQI-HNPRQDSRMLLATQHSATGQVTQWIKK 290 GI LP V E + + +V Q + +++ + Q Sbjct: 236 GISVLPSIAVAEDVARKRMVVLPWSEGGIQVAVLMVWYRERWISPTLQAFMD 287 >UniRef50_Q3K9A7 LysR-family transcriptional regulator n=4 Tax=Pseudomonas RepID=Q3K9A7_PSEPF Length = 302 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 104/309 (33%), Gaps = 14/309 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + F GSFS A EL T IS ++ +E L L RSTR + LT+ Sbjct: 1 MDKLNAMAIFVRVVERGSFSAVARELHTTQPTISKVLRALENELGGKLIARSTRKLSLTD 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ ++ + ++L A + + + + +RI + + + H A L ++FP Sbjct: 61 EGQRYYNECRNILAAVDAAEHSFQSGRETVAGPLRIG-SSVSFGRLHIASRLAEFLQRFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ + + +++ ++++ + L+ G+ IG PD+ L Sbjct: 120 QVQVDLQ---LSDQNLDLVSEGLDVSLRIGE--LNDSGMIARRIGTTHRLTVATPDY-LR 173 Query: 184 FVPEPIAESQLRLYPNIMV-----EDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P + L + + ++ + Q + + + + G Sbjct: 174 RHGHPQSPQDLAQHNCLQFNLLSTQNLWTYEKDGQHHDVRIQGNAQSNNSEAIREMVLGG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIKKQFAPNGI 297 G+ P ++ E + ++ + + + + + Sbjct: 234 LGVSLSPVWLFSEDLKAGRVIALLQDYQTRSLPIHAVSPANRRQSARVNAFVDFMTQ-AL 292 Query: 298 LTGIYQDLL 306 + Sbjct: 293 AAAPELQPI 301 >UniRef50_D0B618 Transcriptional regulator n=56 Tax=Alphaproteobacteria RepID=D0B618_BRUME Length = 325 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 99/308 (32%), Gaps = 12/308 (3%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + + + ++ F GS S AA +LGL+ + +S + R+E L L R+TR I L Sbjct: 19 SMMSSLADMEIFARVVATGSMSAAARDLGLSPAVVSKRLGRLEERLGTRLLQRTTRQIAL 78 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 TE+G+ + + +L + + + S ++I + H A L + Sbjct: 79 TEAGQGYHERVLAILANIEEAEAFVARRSADARGTLKISAP-TTFGRMHIAPYLVPFMRA 137 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 + + + I+ + ++AI + L + + +R F AP + Sbjct: 138 NADLTVNMQ---LSDEMVDIVGDGYDLAIRIGE--LSDSTLVARRLAPVRRIFVAAPRY- 191 Query: 182 LAFVPEPIAESQLRLYPNIMVE--DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 L P L+ + + D K ++ + + + G Sbjct: 192 LKERGTPQTIEDLQDHICLAPHNNDPWRLEGPKGPIVIRPTGPLQTNSSEIVREAVLAGL 251 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSR-MLLATQHSATGQV-TQWIKKQFAPNGI 297 GI + V + LV + + + + Sbjct: 252 GIAQRSTWDVGPELAAGKLVQVLPDYAASRNVAIHAVYPSKQFLPAKVRLFIDYL-ADLY 310 Query: 298 LTGIYQDL 305 Y + Sbjct: 311 GPVPYWES 318 >UniRef50_B9TBP2 HTH-type transcriptional regulator ptxR, putative n=1 Tax=Ricinus communis RepID=B9TBP2_RICCO Length = 298 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 62/298 (20%), Positives = 99/298 (33%), Gaps = 13/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L+AF GSFS AAE LG T S +S TI R+E L + L R+TR ++LTE Sbjct: 1 MLDVGALIAFVAVIDTGSFSNAAERLGQTPSGVSRTISRLEQQLGMTLIHRTTRRLDLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G + +A +L D + VR+ A L +P Sbjct: 61 EGSWLLARARRILADLEETESEAALARARPAGLVRVNAATPT-LDHLIAPQLADFLDAYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 Q+ +T +I +A++AI + L ++ +G R AP + L Sbjct: 120 QVQVELT---SGETVVDLIEEKADVAIRIGN--LSDSTLNARRLGRSRIRVLAAPGY-LE 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHT----INKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P L + + + + T + G Sbjct: 174 RHGTPQQVDDLAKHRLVGFVAPTSLNTWPLRAGGEEGWRAVPHVTATSGETIRHLALQGA 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHN--PRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 GI L D++ R + LV P + + A + + A Sbjct: 234 GIVSLSDFLTRADIAAGRLVPVLEDASLPWTQPVWAVFYKQGALAPRVKALVDFLAER 291 >UniRef50_A8G9I6 Transcriptional regulator, LysR family n=23 Tax=Enterobacteriaceae RepID=A8G9I6_SERP5 Length = 303 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 54/296 (18%), Positives = 105/296 (35%), Gaps = 10/296 (3%) Query: 7 EENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGR 66 +++ F A GS++ AA+ L S++S I ++E L + L R+TR + LT +G Sbjct: 6 LQDMALFALVAECGSYTAAAKRAALPKSSVSQRISQLEQTLGLRLLNRTTRQLNLTFAGE 65 Query: 67 YFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQ 126 + ++L+ + + R+RI L ARL ++Q+P Sbjct: 66 RYLEHCQEMLSAAERADLALQRLRDNPSGRLRISTPAGL-GATLLARLAADFQRQYPDVS 124 Query: 127 ITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVP 186 + V+ V + + D + + A+ + +G +P + LA P Sbjct: 125 LEVS--VSDAMVDMVQEG-FDAALRT--GKPQDSSLIGRRLGHAPRYLLASPAY-LAQSP 178 Query: 187 EPIAESQLRLYPNIMVE--DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 + + QL+ + I + + + +C I G GI L Sbjct: 179 QIVDPQQLQQHRCIAHSSWPVWSLRRGDEYFRWQLPMRHVTDNLLYARECAIAGAGITML 238 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSAT-GQVTQWIKKQFAPNGILT 299 P ++ RE + Q LV + + + L + + Sbjct: 239 PAFLSREVVAQKQLVEVLPEWQAEGNELYLVYPSRKLNSPALACFIDVVLQHPVFD 294 >UniRef50_D2UGC1 Putative transcriptional regulator, lysr family transcription regulator protein n=1 Tax=Xanthomonas albilineans RepID=D2UGC1_XANAL Length = 302 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 105/299 (35%), Gaps = 12/299 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T E + F F+ AA+ LG++T++++ + +E L L R+TR + + Sbjct: 1 MDTLEAMRVFVAVVDRNGFNAAADALGISTASVTRQVAWLEQRLGSRLLNRTTRRVSPSS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G ++++ LL +F ++ + + +RI ++ L ++P Sbjct: 61 VGAAYYQRCQLLLAEFDDMEAAVGEQALTPSGTLRINAP-FSFSIARLGPRLAGYSARYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ + I+ ++AI + + ++G + AP + LA Sbjct: 120 QVALDLS---LSDRVVDIVEEGFDLAIRITRHV--APTLIARKLGEAQVYLCAAPSY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVE----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 P +++ + + DT + S+ + + + I G Sbjct: 174 RAGTPRMPTEIADHAFLNYSYMPLDTLILHGPDGDTQVRVHGSLCANNGDVLREAAIAGM 233 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPR-QDSRMLLATQHSATGQVTQWIKKQFAPNGI 297 GI PD+M A+ LV + + S + GI Sbjct: 234 GIVLQPDFMAEAALEDGRLVRVLPDHQLGPIGVYAVYANRSHLAPKVRSFIDYLVDVGI 292 >UniRef50_Q1LFE8 Transcriptional regulator, LysR family n=15 Tax=Proteobacteria RepID=Q1LFE8_RALME Length = 350 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 48/311 (15%), Positives = 111/311 (35%), Gaps = 20/311 (6%) Query: 5 FTE--ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELT 62 + E + A+ G S AA +GL+ S +S I +E L L RS+R ++ + Sbjct: 28 MSLRTEEIEAYLRVVELGGISAAARHMGLSKSVVSKRISDLERELGASLLQRSSRRMQPS 87 Query: 63 ESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQF 122 ESGRYF+ +A ++ + + +Q + +RI + + + + + L+ + Sbjct: 88 ESGRYFYEQARAAMSQLTQAAQSVSEAAQEVCGELRI-LAPMSFGTRWLSPLIAEFGRAN 146 Query: 123 PTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPL 182 P ++++ + + ++AI L + ++ R +PD+ Sbjct: 147 PRLRLSLE---LDDRLVDLAYGGYDVAIRITR--LRDSDLIARKLAPSRRVVCCSPDYA- 200 Query: 183 AFVPEPIAESQLRLYPNIMVEDT-----AHTINKKVGW---LLHGQESILVPDFNTKCQC 234 A P + + + ++ + + + Sbjct: 201 ARAGLPRTVEDIGHHACLSYSNSLPGQIWTFQPDAHEEAPKTITPRGIYTANNGEVLRDA 260 Query: 235 QILGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFA 293 + G G+ LP ++V E + L+ Q + + +A G + + + Sbjct: 261 VLAGHGLAVLPRFIVWEDLRAGRLIEVQPGATPVEDGIFAVYPRNAFGSAKLRALVQFLQ 320 Query: 294 PNGILTGIYQD 304 + L+ + Sbjct: 321 AS--LSQPPWE 329 >UniRef50_Q3SJT1 Transcriptional regulatory protein, LysR family n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SJT1_THIDA Length = 316 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 56/304 (18%), Positives = 108/304 (35%), Gaps = 14/304 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++ F GS + AAE + L SA+S + +E GL V L R+TR + LTE Sbjct: 1 MDRLAHMQMFVAVVEAGSITAAAERMNLAKSAVSRRLAELEAGLGVSLIQRTTRRLNLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 SGR ++ + +L D + + + R+++ + Q + H A L+Q K+ P Sbjct: 61 SGRTYYARCVAILADVEDAEAEVSQGHGALRGRLKVALPQA-FGLLHLAPLIQTFMKRHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + +N ++ ++AI L + + AI +P + LA Sbjct: 120 DVRLEL---DFNDRQVDLMQEGFDLAIRIA--TLADSTLIARRLAAIPHRVVASPGY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVED------TAHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P A + L + + + ++ + + Q I Sbjct: 174 RRGTPRAAADLTQHDCLAYSNVRDPGLWSYRDPGGEPGQVRVVVRLAASSGEFLLQAAIA 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDS-RMLLATQHSATGQVTQWIKKQFAPNG 296 EG+ LP + + A+ L + + + A + Sbjct: 234 DEGLVLLPAFYLHAALRSGQLSEVLADHRWPEPAAYAVYPPTRHLSARAHAFIDFLAGHL 293 Query: 297 ILTG 300 G Sbjct: 294 GGAG 297 >UniRef50_Q21Z48 Transcriptional regulator, LysR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Z48_RHOFD Length = 309 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 101/291 (34%), Gaps = 14/291 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 + AF A G F+ AA E+GLT SA+S + R+E L L R+TR ++LT G F+ Sbjct: 7 MTAFVRAVETGGFTAAAREIGLTPSALSKLVTRLEDRLGARLLQRTTRRLQLTSEGEAFY 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 +A +L + + +R+ + AR + + +P Q+ + Sbjct: 67 ARARPILLAMDEAEAEVSQAGLSPRGLLRLQC-GTAFGMHQLARTIPHFQALYPDVQLDI 125 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 T + + ++ I LD + I + AP + LA P Sbjct: 126 TI--SDRPPADMKEG-IDLTIRT--GPLDDSSMVARRICTLERVICAAPSY-LALHGTPR 179 Query: 190 AESQLRLYPNIMVEDTAHTINKKVG-----WLLHGQESILVPDFNTKCQCQILGEGIGFL 244 L+ + + + + ++H +++ + T Q + G GI L Sbjct: 180 TPDDLQRHNCLWISNLPALRRWPFDTEDGIRVVHIGGNVVANNAETVLQLAVAGVGITRL 239 Query: 245 PDYMVREAMTQSLLVTRQIHNP--RQDSRMLLATQHSATGQVTQWIKKQFA 293 + +V A+ + LV + + Sbjct: 240 TNVIVSAAIARRELVPILTDWHHVEPVPLFASYPSGRNLAPKVRAMVDFLV 290 >UniRef50_Q7WN36 LysR-family transcriptional regulator n=2 Tax=Proteobacteria RepID=Q7WN36_BORBR Length = 317 Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats. Identities = 48/297 (16%), Positives = 102/297 (34%), Gaps = 13/297 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E+L F A GS ++AA L + A+S T+ +E L V L RSTR + L+E Sbjct: 1 MSRLEDLETFIHIAEAGSLTQAARRLDRSLQAVSRTLAALEQDLGVQLVHRSTRRLALSE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G+ ++ + + + I +R+ +L+ P ++ + +P Sbjct: 61 AGQAYYHRIKPAIAAIAQARLDIAERRAAPSGTLRVGAP-VLFGPDFLVPVIADYMRAYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + + + + + ++ + D L G+ +GA+R AP + A Sbjct: 120 QVHVDLQ---LTDAFADLADEGLDLVVRIGD--LPDSGLQGRRLGALRRVVFGAPAY-FA 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P +LR + I+ + + + G Sbjct: 174 QHGRPTHPEELRQHACIVRTVDPHPGRWVFQIAGKRRTVGVRGAFRANTMAAIYSAVSAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQV-TQWIKKQFAP 294 GIG+ P + ++ + + T + + + Q + + Sbjct: 234 LGIGYSPLWQIQRLLDAGQVETVLEDFEPRPVPIHVLWQENRLMPAKVRAFVDCLVA 290 >UniRef50_A3ZYQ6 Transcriptional regulator, LysR family protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZYQ6_9PLAN Length = 293 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 44/293 (15%), Positives = 99/293 (33%), Gaps = 9/293 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 +L F A GS S AE+L ++ A S ++ ET L LF R+ R + LT Sbjct: 1 MNLHHLAIFHEVAETGSVSLGAEQLMISQPAASKQLRDFETALGEKLFDRTGRGLRLTTV 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ A + +R + + + + + + ++L +Q P Sbjct: 61 GKLLNEYARKIFTLEAEAERVVALVRDVRRGELFLGASTTIAG-YLLPQVLARFHQQHPE 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 ++ V+ + V +++ + ++ + + ++ G+ T A HPL Sbjct: 120 IRVHVSVGNTDFVHRQVLDYRVDLGL--TEGFVNEPGLTATSFAEDELVVVAAATHPLVK 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWL----LHGQESILVPDFNTKCQCQILGEG 240 + L ++ E + T + + + +E + + G G Sbjct: 178 KRR-VKADDLSGQSFVLRESGSGTRAVQEQAISMCGVEVREVMTLSSTEAIKHVVAAGVG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLA-TQHSATGQVTQWIKKQF 292 + + V + L ++ + + + L Q + + Sbjct: 237 LAIVSRLSVGAELVSGELCAIRLADLQIPRPLHLVQAQDRFASPAARAFHEAL 289 >UniRef50_A9EV09 Transcriptional regulator, LysR family n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9EV09_SORC5 Length = 311 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 4/299 (1%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T + L+AF A G+FS A+ L + A+S ++ +E L + LF R LT++ Sbjct: 1 MTYDQLVAFLAVAGEGTFSAASARLHKSQPAVSKLVRNLERELGIELFDRREYRATLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 GR F +A ++ A++ +S +E VR+ ++ + + + L+ + P Sbjct: 61 GRLFHERAAAVIEGTEALRSFGMRLSGKVEPIVRLAVDAVTPLGP-IMDIFRGLQARHPL 119 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 +I + TE G DA+ ++A++A+ A +DG ++ +R DHPLA Sbjct: 120 VRIELGTERLAGTADALREDRADLAV-ATKLGIDGSAVEAARFCDVRVIPVARFDHPLAT 178 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFL 244 PI + LR + I++ D+A +L G V D K + + G G G L Sbjct: 179 SGAPIPPALLRAHAQIILRDSARASASPSLNVLEGGLRWTVTDVAAKKEVILAGMGWGGL 238 Query: 245 PDYMVREAMTQSLLVTRQIHNPRQDSR--MLLATQHSATGQVTQWIKKQFAPNGILTGI 301 P+++ A+ LV Q+ D+ ++ + G V Q + + G G Sbjct: 239 PEHVAAGALAAGELVALQVPEFEADTMELFVIRRRDRPHGVVAQALWEALGRCGHGAGA 297 >UniRef50_A9GJI0 Transcriptional regulator, LysR family n=3 Tax=Myxococcales RepID=A9GJI0_SORC5 Length = 311 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 58/306 (18%), Positives = 109/306 (35%), Gaps = 15/306 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + GSFS+AA LG+T SA+S + R+E L V L R+TRS+ LT+ Sbjct: 1 MVSLAAIELLVATVEAGSFSRAARRLGVTPSAVSRRVMRLEQELGVALLARTTRSLRLTD 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G+ F+ + ++ + I S+ +R+ L A L ++P Sbjct: 61 DGQAFYARCVRIVEELGEATEAIARASKKPVGLLRVDAPVAL-GRDVIAPSLPRFAARYP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 +I +T + + D + ++ + L + +GA R AP + +A Sbjct: 120 DVRINLT--LRDQHVDPVAEG-LDLLVRI--GPLGDSSLVARRLGASRLVHCAAPSY-IA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAH-------TINKKVGWLLHGQESILVPDFNTKCQCQI 236 P + L + + T + + D + I Sbjct: 174 RRGAPATPADLAGHDCVGYLRDGRPTGFRFLTGDGDAVLEVPISGPFHANDVDVLRHLAI 233 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAPN 295 G GI + D++ ++A+ + LVT P + L ++ + A Sbjct: 234 AGSGIIAMFDFLAKDALAEGTLVTVLDEFPTTTWPIHALYPKNRHLLPKVRVFVDFLAEI 293 Query: 296 GILTGI 301 Sbjct: 294 FAPPSP 299 >UniRef50_B9MI47 Transcriptional regulator, LysR family n=8 Tax=Betaproteobacteria RepID=B9MI47_DIAST Length = 317 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 53/298 (17%), Positives = 103/298 (34%), Gaps = 12/298 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + ++L F A G F+ A LG+ S +S + +E L V L R+TR++ LTE Sbjct: 1 MQDLNDMLYFAEVAERGGFAAAGRALGIPKSRLSRRVAELEARLGVRLLQRTTRTLSLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G + R + + A + +D + VR+ L A L+ ++ P Sbjct: 61 VGEAYLRHCQAMRDSAQAAQDTVDQVQTEPRGTVRVTCPVTL-AQTVVAELMPQFLQRHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + ++ ++A+ TL D G + + +R +P+ L Sbjct: 120 QVRLEMQVTN---RVVNVVEEGVDVALRVRPTLEDSGSMVVKRLDEVRLLLVASPE-QLR 175 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHT------INKKVGWLLHGQESILVPDFNTKCQCQIL 237 P + L L + + + +H + D T + Sbjct: 176 RQGTPTSLRDLALLDTLAMSAADGRASLRLIGPEGREETVHFTPRYVADDLLTLKFAALA 235 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRML-LATQHSATGQVTQWIKKQFAP 294 G G+ ++PDYM + + LV + S + + + Sbjct: 236 GTGLCWMPDYMCMSELQEGRLVHLLPQWTQPRSVVHAVFASRRGLSPAVRSFLDFLGE 293 >UniRef50_B8EMI3 Transcriptional regulator, LysR family n=5 Tax=Rhizobiales RepID=B8EMI3_METSB Length = 307 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 59/300 (19%), Positives = 118/300 (39%), Gaps = 9/300 (3%) Query: 8 ENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRY 67 + L F GSFS AA L SA++Y I+++E LDV LF R+ LTE+GR Sbjct: 9 DQLQVFLAVVDEGSFSAAARSLKRAQSAVTYAIQKLEEQLDVRLFDRAAYRPALTEAGRA 68 Query: 68 FFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQI 127 +A + ++ A++ D I+ G E +R+ ++ + + L+++ +FP Sbjct: 69 LLPRARLVADEMQALRSHADAIAAGAEPELRLVVDAM-FPMDRLVEALRLVSARFPFSPP 127 Query: 128 TVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPE 187 + + + ++N I + + + ++ I AP HPL Sbjct: 128 RIYVDSMGAAAELVLNGVCAIGL-LLEFSSSFEQLQRDKLIDIAMIPVAAPIHPLGGAES 186 Query: 188 PIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGFLPDY 247 P++ +LR + +++ D + + + ++ + + D K G G G LP + Sbjct: 187 PVSIEELRPHVQLVLSDRSGLSGDRD-YGVYSTRTWRIADLGAKHAMLKAGLGWGSLPAH 245 Query: 248 MVREAMTQSLLVTRQ------IHNPRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGI 301 +V E + L Q + + + G + + + + Sbjct: 246 LVAEDLANGRLRRIQILDEAGLSEAVRLPLCSAFRRDRPPGPAGRHLLAHLSVASAAAAM 305 >UniRef50_A8GJY7 Transcriptional regulator, LysR family n=68 Tax=Gammaproteobacteria RepID=A8GJY7_SERP5 Length = 301 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 77/291 (26%), Positives = 129/291 (44%), Gaps = 3/291 (1%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + T E L R GSF+ AA+ELG SA+SYT++++E LDVVLF RS + Sbjct: 4 DRALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKF 63 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR + LL + + +++G E + I +++ L P L+ L + Sbjct: 64 TNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTI-VSEALSPPSKLFPLVDKLALK 122 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 Q+++ TEV G W+ + +A+I I I+ ++ + + AP HP Sbjct: 123 -ANTQVSILTEVLAGAWERLEQGRADIVIAPDMHFRASSEINTRKLYKVMSVYVAAPGHP 181 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGI 241 + PEP++E Y I V DTA LL Q+ + V K + G G+ Sbjct: 182 IHLEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLDKQQRLTVSTIEDKRLALLAGLGV 241 Query: 242 GFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQF 292 +P MV + + + L R+ + +A + + G+ W ++ Sbjct: 242 ATMPYPMVEKDIEEGRLRVVGPEYSREVDII-MAWRRDSMGEAKAWFLREI 291 >UniRef50_B4SP80 Transcriptional regulator, LysR family n=10 Tax=Proteobacteria RepID=B4SP80_STRM5 Length = 301 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 51/301 (16%), Positives = 99/301 (32%), Gaps = 14/301 (4%) Query: 10 LLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESGRYFF 69 L F A GSF+ AAE L L+ + I+ +E L V L R+TR LT+ G+ + Sbjct: 7 LRTFAKVAEVGSFAAAAEALDLSPQLVGKHIQALEQHLGVRLLNRTTRKQSLTDFGQAYL 66 Query: 70 RKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTCQITV 129 +A +L + ++ + R+RI + + + +Q+P Q+ + Sbjct: 67 ARARVILEEVEGAEQLAEVARGRPMGRLRISAP-VTFGVHALGPAVVAYMQQYPDVQVDL 125 Query: 130 TTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFVPEPI 189 + I+ + ++ D L G+ +G +P + LA P Sbjct: 126 ---NLSNSLVDIVEDGYDLVFRTGD--LADSGLVARRLGPYPLVLCASPAY-LASRPAIA 179 Query: 190 AESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQILGEGIGF 243 S L + + + + + +V + G G+ Sbjct: 180 HPSDLSRHECLGFAHSIIRTRWSFRDADGSVLTVPVSSRFMVNQAEPLLTAAVGGLGLIL 239 Query: 244 LPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGILTGIY 302 P M+ A+ + LV + P L+ + + + Sbjct: 240 QPYEMLAAALARGELVEVLPDHVPVSTWINLVYPRDRQLTPKLRSFLDFCLARFNEQSMA 299 Query: 303 Q 303 Sbjct: 300 W 300 >UniRef50_D1RWQ7 Transcriptional regulatory protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RWQ7_SEROD Length = 309 Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats. Identities = 54/290 (18%), Positives = 106/290 (36%), Gaps = 13/290 (4%) Query: 6 TEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTESG 65 +LL F A SF+ AAE LG++ S+ ++ R+E L L R+TRS+ LTE G Sbjct: 11 NLSDLLVFVRVADARSFTLAAERLGISRSSAGKSVNRLEERLATRLLHRTTRSVSLTEEG 70 Query: 66 RYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPTC 125 F+ A +L + + I+ Q R+RI + + + H +L+ Q+P Sbjct: 71 LVFYEHALRILAEVDEAETAINQRHQTPRGRLRIDLP-VAFGRLHILPILRDFLLQWPEV 129 Query: 126 QITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAFV 185 + VT ++ + ++ ++AI D + + R +P + L Sbjct: 130 DVEVT---FSDDYSDLVREGIDLAIRIGGN--DDSRLVRKVLAPHRLITCASPRY-LDNH 183 Query: 186 PEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQ-----ESILVPDFNTKCQCQILGEG 240 P L + ++ + + + + + + G G Sbjct: 184 GVPQTPDDLVEHHRLVFSHQGMPVPWRYQVNGQHRDEPVGGRMRFNNTEALRDSALAGLG 243 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQ-HSATGQVTQWIK 289 + L ++V E ++ LV R ++ + + Sbjct: 244 LCQLGAFLVGEQLSAGTLVPVLEKYCRAEAPICAVYPTRRYLSPKVKRFV 293 >UniRef50_Q3KGC9 LysR-family transcriptional regulator n=2 Tax=Pseudomonas fluorescens RepID=Q3KGC9_PSEPF Length = 301 Score = 230 bits (589), Expect = 3e-59, Method: Composition-based stats. Identities = 49/297 (16%), Positives = 106/297 (35%), Gaps = 13/297 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + E + AF F+ AA + + S +S I+ +E + V L R+TRS+ LTE Sbjct: 1 MDRIECMRAFVVTVGENGFAAAARAMDVPRSKVSKQIQALEEAIGVQLLQRTTRSLHLTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G +F A +++ ++R + +R+ + + + +L+ + +Q P Sbjct: 61 AGAEYFEAAREVIAALDEAEQRARDGVGELRGVLRVNAP-MSFGLRRLGKLIPLFHEQHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + V + + ++ I L + ++ +P + L Sbjct: 120 NIELQL---VLSDQQVDPVRGGFDVTIRIAS--LPDSTMIARQLAPAPRIMVASPAY-LE 173 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKK-----VGWLLHGQESILVPDFNTKCQCQILG 238 P LR + + ++ + ++ + + + Q G Sbjct: 174 RAGTPQTPQDLRSHQCLNYGYLQSGVSLQLCNGKETQRVNVTGPLHANNGDLLAQAAEAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRM-LLATQHSATGQVTQWIKKQFAP 294 GI LPD++V EA+ LV + + + Q T+ Sbjct: 234 MGIALLPDFIVEEALAAGRLVPVLCEWQAPAITINAVYSSARRVPQKTRAFIAFLVE 290 >UniRef50_Q4UQ95 Transcriptional regulator n=14 Tax=Proteobacteria RepID=Q4UQ95_XANC8 Length = 311 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 107/304 (35%), Gaps = 13/304 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + T + + F A FS AA+ L +T+ I+ + +E L L R+TR + LT Sbjct: 1 MDTLDAMRVFVAVAERSGFSAAADALDRSTANITRQVAALEQRLGTRLLNRTTRRVSLTS 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +G ++++ LL D ++ + + +R+ + + A LL + +FP Sbjct: 61 AGTAYYQRCLQLLADLDDLEATVGAQALAPSGLLRVNAP-VSFGIVQLAALLPGFRARFP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ ++ + ++ ++A+ + ++G +R AP + LA Sbjct: 120 QVELDLS---LSDRLVDMVEEGFDVALRITRQ--PAPTLIARQLGTVRLVPCAAPAY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVE-----DTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238 P + L + ++ D + + + + + + G Sbjct: 174 RAGTPQHPADLAGHECLLYHYAPTGDDVRFHGPDGDIDVRLRGGLRANNGHVLSAAAVAG 233 Query: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQDS-RMLLATQHSATGQVTQWIKKQFAPNGI 297 +G+ PD++ E + LV D + T S + + Sbjct: 234 QGVVIQPDFLADEHIAAGRLVRILPDYHLADIGIYAVYTSRSHLAPKVRSFIDYLVEHIG 293 Query: 298 LTGI 301 Sbjct: 294 DPAP 297 >UniRef50_B5WW96 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=B5WW96_9BURK Length = 334 Score = 230 bits (588), Expect = 4e-59, Method: Composition-based stats. Identities = 47/299 (15%), Positives = 108/299 (36%), Gaps = 10/299 (3%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 T L F A+R+ SF++AAEEL LT A+S I ++E + + LF R R + LTE+ Sbjct: 19 LTLRQLQIFIVASRYTSFARAAEELHLTQPAVSMQIHQLEEAVGLRLFERVARKLTLTEA 78 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G A+ +L + + + ++ + + I +LL + +P Sbjct: 79 GEVLTHHASRILGEIKDTEDAMMSLKSADSGSITVGIVSS--ATYFAPKLLAMYSHLYPR 136 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + + + +N ++AI + + HPL Sbjct: 137 VDVNFSVGNRDALLRLLQDNAIDLAIMGRPPPELDT--TAEPLASHPQVVIAPLSHPLCG 194 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTINKKVG----WLLHGQESILVPDFNTKCQCQILGEG 240 +L ++ E + T L +++ + T Q + G G Sbjct: 195 ARR-FDLQELCNDIFLLREPGSGTRMAAEAMFRQHLFTPAKTVTLGSNETIKQAVMAGMG 253 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHN-PRQDSRMLLATQHSATGQVTQWIKKQFAPNGIL 298 + + + ++ + + ++ P + + ++ + + ++ + + Sbjct: 254 VSLISLHTLQLELRTGEIALLDVNGTPIERTWQIVHLRSKQLSPTSVMFRQFLLEHAAV 312 >UniRef50_C7QKA9 Transcriptional regulator, LysR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7QKA9_CATAD Length = 299 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 53/291 (18%), Positives = 98/291 (33%), Gaps = 8/291 (2%) Query: 5 FTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTES 64 + L+ F A SF++AA +L S+++ I+ +E L LF R I+LT++ Sbjct: 1 MEFQQLVTFQRVATVLSFTRAAADLNYAQSSVTNQIRNLEASLQTELFDRLGSKIQLTDA 60 Query: 65 GRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFPT 124 G+ A LL + + + + I + + T LL++ ++P Sbjct: 61 GQRLLLHAERLLALADEARADVAGPA-EPSGTLTIGTMESI-TSYRLPPLLELFHYRYPA 118 Query: 125 CQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLAF 184 + + + A+ ++ G+D + R AP PLA Sbjct: 119 VHLALRPSLCADTCRALRQGTFDVGFLMEPDTG-HAGLDSVVLSKERLVLVAAPSFPLAS 177 Query: 185 VPEPIAESQLRLYPNIMVEDTAHTIN----KKVGWLLHGQESILVPDFNTKCQCQILGEG 240 P + LR P + E + + L + + I G G Sbjct: 178 APT-VTIEALRKVPVLATESGCSYRDLFEIELTAEQLTPASFLEFGTIEAIKRGVIAGLG 236 Query: 241 IGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQ 291 + LP+ V + + L P + L + + Q Q Sbjct: 237 VSLLPEITVADEIASGSLTVLPWTPPFEVVIQLAWRRGKRLSRELQLFIDQ 287 >UniRef50_UPI000174499E transcriptional regulatory protein, LysR family n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174499E Length = 302 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 57/292 (19%), Positives = 104/292 (35%), Gaps = 10/292 (3%) Query: 2 NSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIEL 61 + + L AFT AR GSF++A L LT SAIS+ I+ +E L +LF R + + L Sbjct: 3 SPLLDSRQLRAFTVLAREGSFTQAGRALHLTQSAISHAIRALEEDLGCMLFHRQGKRVLL 62 Query: 62 TESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQ 121 T GR R A ++ + + + Q ++RI + + +L+ K Sbjct: 63 THHGRELLRHAEEIQRQMALARASLGALDQNPRGQIRIG-STPAASQFILPTVLREFKDS 121 Query: 122 FPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHP 181 FP I++ + ++A+ + +D + F +P HP Sbjct: 122 FPLYSISIVPGETPDTLQRLEQGVLDLAVCLRPRDV--ARVDCRPLFEDELIFLASPLHP 179 Query: 182 LAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES----ILVPDFNTKCQCQIL 237 A L I+ + T + L I + + + L Sbjct: 180 WAQQHPKT--KDLAGETYIISSRNSSTFEMIGEYFLKLGVRPKSFIELGNTEAIKELVKL 237 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLAT-QHSATGQVTQWI 288 G G+ + + + LV+ + R + ++A + Q Sbjct: 238 GLGVAMVAAWTAPAEIKSGELVSLPLVRSRIKRQWVVAHMKQKPVSLAEQTF 289 >UniRef50_B2JTV0 Transcriptional regulator, LysR family n=12 Tax=Burkholderiaceae RepID=B2JTV0_BURP8 Length = 321 Score = 230 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 69/302 (22%), Positives = 115/302 (38%), Gaps = 5/302 (1%) Query: 1 MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60 M T L AF GSFS AA EL SAIS+ I +E+ DVVLF R+ R Sbjct: 1 MLDNVTINQLRAFVAVCDQGSFSGAARELRRAQSAISHAISALESAFDVVLFERNARKAT 60 Query: 61 LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120 LT +GR A +++ +K R I++ V I ++ ++ H L+ L+ Sbjct: 61 LTAAGRSLLADARGVISRTEEMKMRAVAIAEAGVPHVSIAVD-SYFSRAHLIECLRTLQA 119 Query: 121 QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGG-IDYTEIGAIRWAFAIAPD 179 FPT I + G ++ +A+ D G I+ + + A Sbjct: 120 DFPTAAINLRMTTMQGGERLVLEGTCALAVTITDVPELSPGTIERHHLCDAQMVTVCATS 179 Query: 180 HPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILGE 239 HPLA + PIA + + ++V D K + + V D K G Sbjct: 180 HPLAAIVGPIAREEFGRHIQLVVTDNQPHAEK-TQQGVVSERQWWVNDLGAKHDLLRGGL 238 Query: 240 GIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHS--ATGQVTQWIKKQFAPNGI 297 G +P ++V + + LV + + +Q + + + ++ + Sbjct: 239 CWGHMPHHLVAQDLANGTLVELKRRAWHMRPLTFMISQRRGYSFSECEARLIERLGDRQM 298 Query: 298 LT 299 Sbjct: 299 CP 300 >UniRef50_Q141A4 Transcriptional regulator, LysR family n=2 Tax=Burkholderia RepID=Q141A4_BURXL Length = 342 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 113/299 (37%), Gaps = 16/299 (5%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + + FT SFS AA+ L +T S+++ I+ +E L V L R+TR I LT Sbjct: 1 MDKLQAMQVFTRVVDTNSFSGAADSLHMTRSSVTTIIQALEAYLKVRLLNRTTRRISLTP 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G ++ + + +L D + + ++++ + + L ++P Sbjct: 61 DGAAYYERCSRILADVEDSESSFSR-ASAPRGKLKVDMPGSI-GRLLIVPALDEFHARYP 118 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++ + +I + + AI + + +G + +PD+ +A Sbjct: 119 DIELMLGVG---DRAVDLIQDSVDCAIRM--GPMQDSTLVARRVGVSEFVTVASPDY-IA 172 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQES-------ILVPDFNTKCQCQI 236 EP++ ++L + + + + ++ +++ G+ + D QC + Sbjct: 173 RNGEPVSLAELESHTAVNYFSSRNGRIVEMDFVVDGKPVDVRMRSKLAANDGEAYLQCGL 232 Query: 237 LGEGIGFLPDYMVREAMTQSLLVTRQIH-NPRQDSRMLLATQHSATGQVTQWIKKQFAP 294 G G+ +P ++ + LV + P + Q+ + + A Sbjct: 233 RGLGLIQVPHFLALPHLESGALVEVLGNCRPSPFPISAVYPQNRHLSPQVRVFVEWVAE 291 >UniRef50_B2UJD9 Transcriptional regulator, LysR family n=2 Tax=Ralstonia pickettii RepID=B2UJD9_RALPJ Length = 299 Score = 230 bits (587), Expect = 5e-59, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 107/306 (34%), Gaps = 14/306 (4%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + + ++ F GS +KAAE +G+ SA+S + +E L L RST + +TE Sbjct: 1 MSRLDEIMTFVEVVNAGSITKAAERMGIVKSAVSRRLNDLEDRLKARLLVRSTAGLSVTE 60 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 +GR F +A ++ + + + S + + + L T + + P Sbjct: 61 AGRAFHERARRIIAELDEAELTVTDASADLSGTIHMSAPVSL-TNLVLMPHICAFLRLHP 119 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 + ++ + + I+N +IAI A L + ++ +R +PD+ LA Sbjct: 120 GLTLDLS---LSDRFVDIVNEGFDIAIRA--GTLSDSRLVARKLTDMRRVTCASPDY-LA 173 Query: 184 FVPEPIAESQLRLYPNIMVEDT------AHTINKKVGWLLHGQESILVPDFNTKCQCQIL 237 P+ L + ++ + +T +L + + + Sbjct: 174 SRGTPLTPQDLDHHDGLVSTNAPESTYWHYTAPDGETYLARPNTRMKANNGEAVITAAVA 233 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQD-SRMLLATQHSATGQVTQWIKKQFAPNG 296 G GI +P ++ E + Q L+ S + + + Sbjct: 234 GLGIAAVPAFISTELIAQGALIPVLSDYRLAAGSLYAIYPPGRHLSHRVRVLIDCLVERF 293 Query: 297 ILTGIY 302 + Sbjct: 294 AIRQPT 299 >UniRef50_Q3JWC0 LysR family regulatory protein n=26 Tax=Burkholderia RepID=Q3JWC0_BURP1 Length = 322 Score = 230 bits (587), Expect = 6e-59, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 9/298 (3%) Query: 4 IFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIELTE 63 + L F A F KAA+ L L ++ I +E L + LF RSTRS++LT Sbjct: 16 MIDLRRLRYFIVVAEELHFGKAAQRLHLAQPPLTRHISALEGELGLRLFDRSTRSVKLTA 75 Query: 64 SGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKKQFP 123 G F A D+L+ + + + G E +V + + L++ + FP Sbjct: 76 EGELFLPHARDVLDAVHRAEIASQRAALGKEGKVALGYTSSVPLCDAFGTLIRNFARSFP 135 Query: 124 TCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAPDHPLA 183 ++++ +I +I IG ++ D G I A A++ + LA Sbjct: 136 DIELSLVEASSAQQGRSIKEGLLDIGIGWKNSFEDYEGCRVKTIAAEPLVVAVSQERALA 195 Query: 184 FVPEPIAESQLRLYPNIMVEDTAHTINKKVGW------LLHGQESILVPDFNTKCQCQIL 237 +A QL ++ + + + + T Sbjct: 196 SEAS-LAVEQLADETFVLFPPGYGSTLDRKAFDLCATAGFTPRRGPSASQMTTMIALVAA 254 Query: 238 GEGIGFLPDYMVREAMTQSLLVTRQIHNPRQDSRMLLATQHSATGQVTQWIKKQFAPN 295 G G+ +P+ + + + + + + ++L + + + + + Sbjct: 255 GRGVAIVPEAV--STLRKPGVAYVPLTDESALIELVLMWREAGLSLAARSFVEWHKAH 310 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.189 0.561 Lambda K H 0.267 0.0581 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,289,949,004 Number of Sequences: 3077464 Number of extensions: 137328910 Number of successful extensions: 482939 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 19765 Number of HSP's successfully gapped in prelim test: 1845 Number of HSP's that attempted gapping in prelim test: 423777 Number of HSP's gapped (non-prelim): 22933 length of query: 310 length of database: 1,040,396,356 effective HSP length: 128 effective length of query: 182 effective length of database: 646,480,964 effective search space: 117659535448 effective search space used: 117659535448 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 94 (40.3 bits)