BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (475 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammapro... 971 0.0 UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteria... 541 e-152 UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax... 479 e-134 UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatu... 447 e-124 UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepI... 430 e-119 UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD 427 e-118 UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Altero... 416 e-114 UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuni... 379 e-103 UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromo... 377 e-103 UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinob... 373 e-101 UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine ... 369 e-100 UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellula... 368 e-100 UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter ho... 360 9e-98 UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=... 353 8e-96 UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter ca... 345 2e-93 UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaprote... 344 4e-93 UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfu... 343 8e-93 UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiell... 342 1e-92 UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma p... 341 5e-92 UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=... 340 8e-92 UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromoh... 337 5e-91 UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynuc... 337 5e-91 UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepI... 333 8e-90 UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=... 332 2e-89 UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B... 332 2e-89 UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisp... 332 2e-89 UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermane... 329 1e-88 UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp.... 327 8e-88 UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4... 326 1e-87 UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfo... 326 1e-87 UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacte... 326 1e-87 UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepI... 326 1e-87 UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 ... 324 5e-87 UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio ja... 321 4e-86 UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfuri... 319 1e-85 UniRef50_B9L835 DNA recombination protein RmuC family protein n=... 318 3e-85 UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bac... 318 4e-85 UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma pro... 313 1e-83 UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alterom... 310 7e-83 UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinel... 308 2e-82 UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinom... 307 5e-82 UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candida... 304 6e-81 UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Maripro... 300 7e-80 UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campyloba... 299 1e-79 UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobact... 299 1e-79 UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reineke... 298 3e-79 UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacte... 296 8e-79 UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaprot... 294 5e-78 UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsu... 294 5e-78 UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricau... 289 2e-76 UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudom... 289 2e-76 UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingoba... 288 2e-76 UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorob... 283 1e-74 UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira cruno... 282 2e-74 UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=... 279 2e-73 UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistip... 275 2e-72 UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovib... 275 2e-72 UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobact... 274 7e-72 UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasm... 274 7e-72 UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=... 267 5e-70 UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=u... 267 6e-70 UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychro... 267 8e-70 UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodoba... 266 1e-69 UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroi... 266 1e-69 UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotr... 265 4e-69 UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurel... 264 5e-69 UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus... 263 7e-69 UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candida... 263 9e-69 UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=... 261 5e-68 UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoc... 259 1e-67 UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammapr... 256 1e-66 UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacter... 256 1e-66 UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassif... 256 2e-66 UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammapr... 253 1e-65 UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicol... 252 2e-65 UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria ... 251 5e-65 UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibac... 250 7e-65 UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylo... 250 8e-65 UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 T... 249 1e-64 UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine ... 248 5e-64 UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victiva... 244 7e-63 UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingiv... 241 3e-62 UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 T... 241 5e-62 UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 ... 233 2e-59 UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G... 231 5e-59 UniRef50_UPI000190CB97 DNA recombination protein RmuC n=2 Tax=Sa... 224 4e-57 UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=... 224 5e-57 UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotell... 223 2e-56 UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicob... 220 7e-56 UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicob... 219 1e-55 UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCV... 208 4e-52 UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninog... 202 2e-50 UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis... 197 6e-49 UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W... 195 4e-48 UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methano... 193 1e-47 UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 ... 187 5e-46 UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadal... 182 2e-44 UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8... 182 2e-44 UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitino... 176 1e-42 UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Z... 176 1e-42 UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibroba... 175 3e-42 UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis a... 174 6e-42 UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingo... 172 4e-41 UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID... 171 5e-41 UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfo... 169 2e-40 UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus ... 169 3e-40 UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothi... 169 3e-40 UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium... 168 4e-40 UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candida... 167 6e-40 UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum cente... 166 2e-39 UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Ta... 166 2e-39 UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschi... 165 4e-39 UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinom... 163 2e-38 UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanim... 160 8e-38 UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinom... 158 5e-37 UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkerma... 157 6e-37 UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutu... 157 6e-37 UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalk... 155 3e-36 UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmoto... 155 4e-36 UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=unculture... 154 6e-36 UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenb... 154 1e-35 UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae Rep... 153 1e-35 UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas R... 152 2e-35 UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaerom... 150 7e-35 UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Ta... 146 2e-33 UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family ... 146 2e-33 UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalk... 144 6e-33 UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacteri... 144 8e-33 UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithio... 144 1e-32 UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxi... 143 1e-32 UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula b... 143 2e-32 UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sangui... 142 4e-32 UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanoba... 141 4e-32 UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=... 138 5e-31 UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus ... 137 1e-30 UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimi... 137 1e-30 UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamur... 136 1e-30 UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=... 135 5e-30 UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geoderm... 134 5e-30 UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocan... 133 1e-29 UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfo... 133 1e-29 UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=... 133 1e-29 UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campyloba... 133 2e-29 UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinis... 132 2e-29 UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmati... 132 3e-29 UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordoni... 132 3e-29 UniRef50_Q0S487 Possible DNA recombination protein, RmuC family ... 132 4e-29 UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacteriu... 131 7e-29 UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16... 130 8e-29 UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimi... 130 9e-29 UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbel... 130 9e-29 UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=... 130 1e-28 UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, ... 130 2e-28 UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardi... 128 4e-28 UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=F... 127 7e-28 UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenit... 127 8e-28 UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Co... 127 1e-27 UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinob... 126 2e-27 UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacter... 124 6e-27 UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C... 122 3e-26 UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukam... 122 4e-26 UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actino... 121 5e-26 UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Microc... 121 5e-26 UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinom... 119 2e-25 UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID... 118 5e-25 UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. ora... 116 2e-24 UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Microc... 116 2e-24 UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=P... 114 7e-24 UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 ... 113 2e-23 UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria... 107 1e-21 UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmati... 101 5e-20 UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured ... 100 2e-19 UniRef50_UPI0001910984 DNA recombination protein RmuC n=1 Tax=Sa... 99 2e-19 UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitr... 93 3e-17 UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured ... 90 2e-16 UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q... 85 5e-15 UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi... 80 1e-13 UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvima... 80 1e-13 UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodoba... 78 7e-13 UniRef50_C7MYN0 Uncharacterized conserved protein n=4 Tax=Actino... 78 9e-13 UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B... 75 8e-12 UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH ... 74 2e-11 UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicu... 72 4e-11 UniRef50_Q2NJ26 RmuC family protein n=5 Tax=Candidatus Phytoplas... 72 5e-11 UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaprot... 71 9e-11 UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=... 71 1e-10 UniRef50_B3CQE7 DNA recombination protein RmuC homolog n=2 Tax=O... 70 2e-10 UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacte... 69 5e-10 UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B... 68 8e-10 UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracil... 67 2e-09 UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=... 66 2e-09 UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE0... 66 2e-09 UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae Re... 65 4e-09 UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales Rep... 65 6e-09 UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6B... 64 2e-08 UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidl... 64 2e-08 UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma my... 60 1e-07 UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteur... 60 2e-07 UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammapr... 60 2e-07 UniRef50_C1RMZ6 Uncharacterized conserved protein n=1 Tax=Cellul... 60 3e-07 UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepI... 59 3e-07 UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythro... 59 5e-07 UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteri... 58 7e-07 UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax... 58 8e-07 UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus la... 56 3e-06 UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opituta... 56 3e-06 UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betapro... 56 3e-06 UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacte... 55 6e-06 UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter pr... 55 6e-06 UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae Rep... 54 9e-06 UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia... 54 1e-05 UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID... 54 1e-05 UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimo... 54 2e-05 UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovo... 53 2e-05 UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostri... 53 2e-05 UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter pisco... 53 3e-05 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 52 4e-05 UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bactero... 51 8e-05 UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=M... 51 1e-04 UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphapr... 50 2e-04 UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1... 50 2e-04 UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Strepto... 49 3e-04 UniRef50_A6LNI7 Uncharacterized protein-like protein n=2 Tax=The... 49 4e-04 UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LR... 49 4e-04 UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidami... 49 4e-04 UniRef50_C4XER8 Putative uncharacterized protein n=1 Tax=Mycopla... 49 5e-04 UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K... 49 5e-04 UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=B... 49 5e-04 UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostri... 47 0.001 UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8... 47 0.001 UniRef50_Q4A6N0 Putative uncharacterized protein n=2 Tax=Mycopla... 47 0.002 UniRef50_A5IY37 DNA recombination protein n=1 Tax=Mycoplasma aga... 46 0.003 UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 ... 46 0.003 UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychro... 46 0.003 UniRef50_A3VQI8 RmuC domain protein n=1 Tax=Parvularcula bermude... 45 0.004 UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncul... 44 0.010 UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamon... 44 0.017 UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Therman... 44 0.017 UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collins... 42 0.036 UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=... 42 0.055 UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiph... 42 0.057 >UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammaproteobacteria RepID=RMUC_ECO57 Length = 475 Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA Sbjct: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN Sbjct: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL Sbjct: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ Sbjct: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ Sbjct: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR Sbjct: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ Sbjct: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR Sbjct: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 >UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteriaceae RepID=D2TWP3_9ENTR Length = 445 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 265/448 (59%), Positives = 350/448 (78%), Gaps = 11/448 (2%) Query: 1 MDFSIMVYAVIA-----LVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQS 55 MD ++ YA+I L G ++ WL AQ+ ++ +E + + ++ +++I Sbjct: 1 MDIQLL-YAIIGFLTGTLFGGSLIWLVI----AQKMNKKESELRDFYSIQASYEEKIAHL 55 Query: 56 EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQF 115 E+W+ ECE + E+RS + IN + E +LREV TR+E + ++K R ++NSEQRL+ QF Sbjct: 56 EYWKIECEHRDQELRSQREINRNQEVELREVMTRLEETRLAFEEKQRLLLNSEQRLNVQF 115 Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 ENLANRIFE + RR EQNRQSL +LL+P REQLDGFRRQV +SF +EA+ERHTL HEIR Sbjct: 116 ENLANRIFEQNERRASEQNRQSLIALLTPFREQLDGFRRQVHESFSQEARERHTLAHEIR 175 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 LQQLNA+MA+E INLT+ALKGD K QGNWGE +L+R+LEASGLR+G+E+ETQVSI N + Sbjct: 176 QLQQLNAEMAKETINLTKALKGDTKIQGNWGETILSRILEASGLRQGHEFETQVSI-NTS 234 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 SR QPDVI+RLPQGKDVVIDAKM+L AYE YFN+ED+ R +AL+ H+ SVRNHI+ LG Sbjct: 235 NSRYQPDVIIRLPQGKDVVIDAKMSLTAYEHYFNSEDEQQRATALRGHVNSVRNHIKELG 294 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 RKDY QL GLR+LDYVLMFIP+EPA+L+AL PELI E L+NNI+LV P+TLLVA+RTI Sbjct: 295 RKDYHQLNGLRSLDYVLMFIPLEPAYLIALREAPELIDEGLRNNILLVCPSTLLVAVRTI 354 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 NLWRYE QS+NAQ IA+RA+++YDKMRLF+DD+ +GQSL KAQ NY+ A+KKL+ G+G Sbjct: 355 NNLWRYERQSQNAQVIAERAARMYDKMRLFVDDIQVLGQSLSKAQLNYQSAIKKLAEGKG 414 Query: 416 NVLAQAEAFRGLGVEIKREINPDLAEQA 443 N+++QAE+ + LG+E+KR I+ + ++Q Sbjct: 415 NLISQAESLKELGIEVKRPIDTEFSKQT 442 >UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax=Gammaproteobacteria RepID=RMUC_VIBCH Length = 513 Score = 479 bits (1233), Expect = e-134, Method: Compositional matrix adjust. Identities = 256/479 (53%), Positives = 334/479 (69%), Gaps = 40/479 (8%) Query: 3 FSIMVYAVIALVGVAIGWLF-----------------ASYQHAQQKA---EQLAEREEMV 42 +S +V A GVAIGW S+ HAQQ EQL ++ + Sbjct: 15 WSALVSA--GATGVAIGWWVKQRYQLKTQLLEQQLEQQSHWHAQQIQQLNEQLTTAQQEL 72 Query: 43 AELSAAKQ----QITQS--------------EHWRAECELLNNEVRSLQSINTSLEADLR 84 EL A + ++ QS E + E + +E+ +++ LE+ LR Sbjct: 73 DELDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLR 132 Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 E R + + +K++ + +E+RL +QFE+LAN++FEH VD QNRQSL LL+P Sbjct: 133 EQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTP 192 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L+EQL+GF++QV DSF EA+ERHTL HE+RNLQ+LN QMA+EA+NLT+ALKGDNK QGN Sbjct: 193 LKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQQGN 252 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGEVVL RVL SGLREG+EY+TQVS++N+A R QPDVIV LPQ K VVID+KM LVAY Sbjct: 253 WGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKMALVAY 312 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 ERYF+AE D R+SAL+EH+ ++RNHIR LG+KDY QL G+++LDYVLMFIPVEPAF +A Sbjct: 313 ERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVA 372 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 + P L+ +A++ NI+LVSPTTLLVALRTI NLWR E Q++NAQ IA+RASKLYDK+RL Sbjct: 373 IQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRL 432 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F++DM +G +LDKA +Y+ AM KL +GRGN + QAE+F+ LGVEIKR I L E+A Sbjct: 433 FVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPLIERA 491 >UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatus Blochmannia floridanus RepID=Q7VRJ0_BLOFL Length = 491 Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust. Identities = 208/394 (52%), Positives = 302/394 (76%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E+ ++LSA ++++ ++ + E +N ++ + N + E +L+E+ R+E + A + Sbjct: 77 ELNSKLSAVEERLKLISCYQQKYEQINAKLNIQLNTNHTQELELKELRIRLEEYKLSATE 136 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 K + +INSE RL+ QFENLANRIF+HS ++ EQNR +LN++L PL+EQL+ F++Q+QD+ Sbjct: 137 KEKLLINSENRLTMQFENLANRIFDHSRIKIHEQNRLTLNNVLYPLQEQLNTFKKQIQDN 196 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 F KE + R+ LT+EI NL QLN ++ QEAINLT+ALKG+NKTQGNWGEV+LTR LE SG+ Sbjct: 197 FSKEERMRNDLTYEIHNLHQLNTKITQEAINLTQALKGNNKTQGNWGEVILTRTLETSGM 256 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 REG+E+ QV+I+ ++QPDVIV LP GK+V+IDAK++L+AYERYFN D +++A Sbjct: 257 REGHEFHLQVNIQETNGRKLQPDVIVHLPNGKNVIIDAKVSLIAYERYFNYNDKKDKQTA 316 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 + +HI S+R HI+ L +K+YQ+L L+TLDY+LMFIP+E AF +A+++ P L+T+A+ N Sbjct: 317 MNDHIHSLRTHIKSLNKKNYQELFQLKTLDYILMFIPIESAFSIAIEKDPTLLTDAMNRN 376 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 IMLVSPTTLLVALRTI NLWRYEHQ+ +A++IA++A +LYDK+RLF++D++ IG L K Sbjct: 377 IMLVSPTTLLVALRTIHNLWRYEHQNLHAKKIAEKAGRLYDKLRLFMEDVNKIGFYLHKT 436 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + Y A KLS G+GN++ Q E FR LGV+IK+ Sbjct: 437 ETMYNSAKNKLSEGKGNIITQIEGFRKLGVQIKQ 470 >UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepID=A4ST62_AERS4 Length = 446 Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust. Identities = 209/375 (55%), Positives = 284/375 (75%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 ++ L A L++ + + + A +K++ + EQRLS+QFENLANRIFE ++ + Sbjct: 69 TLLIKLTARLKDAEATLRSERLAAAEKLQLQRDGEQRLSQQFENLANRIFEQNSGNFRDL 128 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 N+ SL+ LL+PL+EQL+GFRRQV ++ +E +RH+L E+ L +LNA+M +EA LTR Sbjct: 129 NQNSLDLLLTPLKEQLEGFRRQVGETHAQETAQRHSLKFELERLAELNARMTEEAAALTR 188 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 ALKGD+K QGNWGEVVL R+L GLREG+EY TQV+IE D R QPDVIV LPQ KD+ Sbjct: 189 ALKGDSKQQGNWGEVVLARILSECGLREGHEYHTQVNIELDKGKRYQPDVIVHLPQEKDI 248 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 +IDAK++L AYER++N +D + AL+EH+ASVRNHIR LGRKDYQQLPG+RTLDYVLM Sbjct: 249 IIDAKVSLTAYERWYNTDDALEKAVALKEHVASVRNHIRELGRKDYQQLPGVRTLDYVLM 308 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+ VEPAFL AL+ P L+ L NNI+LVSPT L+VALRTI NLWRYE Q++NA+QIA+ Sbjct: 309 FVAVEPAFLTALEADPSLVRFGLDNNILLVSPTNLMVALRTIENLWRYERQNQNARQIAE 368 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 RA +LY+K+RLF+++M +G SL KAQ++Y +AM +L +GRGN++AQ E FR LGVE+ + Sbjct: 369 RAGRLYEKLRLFVEEMQQMGGSLHKAQESYDKAMGRLVNGRGNLIAQVERFRELGVEVTK 428 Query: 434 EINPDLAEQAVSQDE 448 + L +A+ +++ Sbjct: 429 PLPETLVNRALERED 443 >UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD Length = 429 Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/393 (52%), Positives = 283/393 (72%), Gaps = 2/393 (0%) Query: 56 EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQF 115 +H +CE L E+ S + + L A R++A +DK+ M SEQRL QF Sbjct: 39 KHVTKQCEQLQTELNSERIASAKLHAQNEAHQARIQALHTAHEDKLAAMNASEQRLHTQF 98 Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 ENLANRIFE +R +Q + ++ ++L+P + +LDGF+RQ+ + +E QER +L EI Sbjct: 99 ENLANRIFEEKQQRYTQQTKHNIEAVLAPFKNELDGFKRQISEQHIREGQERASLKTEIL 158 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 +L+ LN ++ +EA LT ALKGDNK QGNWGEVVL R+L+ SGLREG+E+ETQ+S ++ Sbjct: 159 SLKALNQKITEEAAALTNALKGDNKKQGNWGEVVLERILKESGLREGHEFETQMSATSEQ 218 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 R QPDV+V LP KDV+ID+K++L AYERYFN EDD + L +H+AS++ HI+ LG Sbjct: 219 GKRFQPDVVVHLPNDKDVIIDSKVSLAAYERYFNCEDDTEKAQHLAQHVASIKGHIKGLG 278 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 KDYQ L G++TLDYVL+FIP+EPAFL+A++ +PEL+T AL +NIMLVSPT LLVALRTI Sbjct: 279 AKDYQTLQGIKTLDYVLLFIPIEPAFLIAVEEEPELVTTALNHNIMLVSPTNLLVALRTI 338 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 N+W+YE+Q++NAQ IAD+A+KLYDK F+ DM +G+S+D A +Y QAM KL+SGRG Sbjct: 339 NNIWQYEYQNQNAQLIADQAAKLYDKFVGFVTDMEKVGKSMDSAHTSYEQAMNKLTSGRG 398 Query: 416 NVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 N++ Q E FR LGV+ + ++ L Q +SQD+ Sbjct: 399 NIVRQIEKFRELGVQPSKRMSQHL--QQLSQDD 429 >UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Alteromonadales RepID=Q12LQ0_SHEDO Length = 522 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 208/424 (49%), Positives = 299/424 (70%), Gaps = 14/424 (3%) Query: 26 QHAQQKAE----QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 +HAQ K E Q+++ E ++ + Q++ ++ E +L +L N + Sbjct: 78 KHAQSKIEVLIAQVSKVEAQAERATSLETQLSDTQRKLMESQL------ALSKSNAMQQT 131 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 L + T EA Q DKIR + +E RL+ QFENLANRIFE + +QN ++S+ Sbjct: 132 ILIKSRTEQEALQ----DKIRLLETAEARLTVQFENLANRIFEERSENFKQQNVSQIDSV 187 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L PL++QL+GFR+Q+ +S+ E ER L H++ +L +LN +M+Q+A+NLT ALKGDNK Sbjct: 188 LGPLKQQLEGFRQQINESYTHEQSERSALKHQLTHLHELNMKMSQDAVNLTNALKGDNKQ 247 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 QGNWGEV+L RVL+ SGLREG+EY+TQ +++D R +PDVIV LP+ KDVVIDAKM+L Sbjct: 248 QGNWGEVILERVLQESGLREGHEYQTQQELKDDNGKRFKPDVIVHLPEQKDVVIDAKMSL 307 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 +AYERYFN+ D+ ++ AL+EH+ S+R HI+ L +KDY +L GL++LDYVLMFIP+EPAF Sbjct: 308 IAYERYFNSSDESHKQQALKEHVISIRQHIKGLSQKDYHKLHGLKSLDYVLMFIPIEPAF 367 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 LLA++ P +I AL+ NIMLVSPT LLVALRTI N+WRYE+Q++NAQ IA +A+K+YDK Sbjct: 368 LLAIEHDPSIINFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQNAQTIAKQAAKMYDK 427 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 FI+DM +G++L+ A+ +Y+ AM KLSSG+GN++ QA + LGV+ ++++ Sbjct: 428 FCGFIEDMDKVGRALEGAEKSYQSAMGKLSSGKGNLVRQAHLMQKLGVDTSKQLDKHKVN 487 Query: 442 QAVS 445 A+S Sbjct: 488 LALS 491 >UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN95_9GAMM Length = 492 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 196/454 (43%), Positives = 298/454 (65%), Gaps = 26/454 (5%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ---------------SEHWRAECEL 64 WL AQ+KA LA + + L+ A + + Q +E R L Sbjct: 39 WLDLEAAAAQEKANLLASEQAITLRLNEATEALQQLRSEQHHTELQRERLTERLRGIEPL 98 Query: 65 LNNEVRSLQSINTSLE------ADLREVT----TRMEAAQQHADDKIRQMINSEQRLSEQ 114 L V+ + + LE AD EV TR+EA ++ DK++ + + ++L E+ Sbjct: 99 LTTAVQEKKHLEKKLEQTAFQLADRSEVVAELETRLEAEREAHADKLKTLEQAREQLREE 158 Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 F+N+ANRIF+ +++ + N+++L LL+PL++QL F+R+V+D + KEA++R L +I Sbjct: 159 FQNVANRIFDEKSKQFRDSNQENLGQLLNPLKDQLGDFKRKVEDVYDKEAKDRRALHEQI 218 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +L+ LN QM+++AINLT+ALKGD+K QGNWGEV+L R LE SGLR+GYE+E QV++ + Sbjct: 219 NHLRDLNQQMSEDAINLTKALKGDSKAQGNWGEVILERALEESGLRKGYEFELQVAVTEE 278 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 + R PD ++ LP GKD+++D+K++L AYERY AED + L+EH+ SVR HI+ L Sbjct: 279 GQ-RYLPDAVIHLPDGKDIIVDSKVSLTAYERYCAAEDPAEKARFLREHLLSVRGHIKGL 337 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K YQ L +R+LD+VL+FIP+E AFLLAL+++P L EA NIMLVSP TL+V LRT Sbjct: 338 SEKAYQGLSDIRSLDFVLLFIPIEGAFLLALEKEPALFKEAFDRNIMLVSPATLMVTLRT 397 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 I N+WRYEHQ++NAQ+IA R +L+DK F++ + IG++LD+ Q + A K+L+SGR Sbjct: 398 IHNIWRYEHQNQNAQEIAKRGGELHDKFVGFLESLDDIGRNLDRTQQAFDTAHKRLASGR 457 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 GN+++Q + LG E K++I+ +L ++A+ D+ Sbjct: 458 GNLVSQVAMLQKLGAEGKKQISKELVDRAIESDK 491 >UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromonas RepID=Q1ZJ37_9GAMM Length = 460 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 194/377 (51%), Positives = 268/377 (71%), Gaps = 4/377 (1%) Query: 69 VRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR 128 + SLQ N + A +RE R +A +Q ++R ++E++LS QFE L+ RIF + Sbjct: 67 IDSLQRQNQKITARVRESELRQQAGEQ----RLRDQQDNEEKLSNQFELLSQRIFSEKSE 122 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + N++SL LLSPL+ Q++GF++QV + E++ER+ L EI+ L +N M QE Sbjct: 123 QFKNVNQESLQQLLSPLQLQIEGFKKQVTQCYIDESKERYNLQSEIKKLANINLLMQQET 182 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +NLT ALKGDNK QGNWGE+VL R+LE SGLREG+EYETQ +N+ R PDVIV LP Sbjct: 183 LNLTNALKGDNKQQGNWGEIVLQRILENSGLREGHEYETQKHYKNEQGQRFLPDVIVHLP 242 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 Q KD++ID+K++LVAYER+FN++D ++ A+ H AS+R HI+ LG+KDYQ L G L Sbjct: 243 QQKDIIIDSKVSLVAYERFFNSDDVTEQKQAISAHCASIRQHIKSLGKKDYQNLLGANRL 302 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 DYVL+F+ VEPAF++A++ PEL+ AL NNI+L SPT L++ALRTI NLWR++ Q +N Sbjct: 303 DYVLLFVAVEPAFIVAIEHDPELVKLALDNNILLASPTNLMIALRTIENLWRFDQQHKNG 362 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + IA +ASKLYDK+RLF +M +GQSL KAQD+Y A+K+LS+GRGNV+AQAEA R +G Sbjct: 363 RHIAAQASKLYDKLRLFSHNMLDVGQSLGKAQDSYDHALKQLSTGRGNVIAQAEALRQMG 422 Query: 429 VEIKREINPDLAEQAVS 445 V + + + L A S Sbjct: 423 VVVNKPLPESLVTNAGS 439 >UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U2A2_MARAV Length = 548 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 191/430 (44%), Positives = 288/430 (66%), Gaps = 12/430 (2%) Query: 19 GWLFASYQHAQQKAEQLAER-EEMVAELSAAKQQITQ----SEHWRAECELLNNEVRSLQ 73 G L S +H +Q++ L R + +EL+A + ++ Q S ++ E L+ E+ Sbjct: 93 GQLEQSIEHWRQQSAALENRLAALASELTAKQDRVAQLASESGQYQQRAETLSEEL---- 148 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 L+ +LRE ++ ++ A +K+ + + L ++FENLANRIFE + R +Q Sbjct: 149 ---GQLKVELREQQVTLDKERRSASEKLELLEKNRDALKQEFENLANRIFEQKSERFSQQ 205 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 ++ SL+SLL+P R+QL FR++V+D + E ++R L EI++LQ+LN Q+ +EA NLTR Sbjct: 206 SKTSLDSLLNPFRDQLQDFRKRVEDVYTTETRDRQALRSEIKSLQELNRQITEEAANLTR 265 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 ALKGD K QGNWGE++L RVLE SGLR+G EYETQ S ++ ++PDVIV LP +++ Sbjct: 266 ALKGDKKIQGNWGELILERVLERSGLRKGVEYETQGSYRDEDNQLLRPDVIVHLPDQRNL 325 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 VID+K++LVAY+++ A+ + R +AL++H+ +VRNHIR L KDY QL GL + D+VL+ Sbjct: 326 VIDSKVSLVAYQQWVTADQEEERAAALKQHVEAVRNHIRTLSEKDYSQLNGLHSPDFVLL 385 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P+EPAF+ A + L EA + I++V+PTTLL LRTI N+WRYE QS+NA++IAD Sbjct: 386 FMPIEPAFVAAFQQDENLFAEAFERKIIVVTPTTLLATLRTIENIWRYERQSQNARRIAD 445 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 RA +YDK+R+F++ M +G L AQ Y AM L+ GRGN+++QA F LGV +K+ Sbjct: 446 RAGAVYDKLRVFVEAMEKLGSQLHTAQGTYDNAMNTLTRGRGNLISQANRFVELGVRVKK 505 Query: 434 EINPDLAEQA 443 E+ + +QA Sbjct: 506 ELPKSIVDQA 515 >UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDB3_9GAMM Length = 490 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/361 (49%), Positives = 263/361 (72%), Gaps = 2/361 (0%) Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 T + QQ ADDK++ + + Q+L+ FE LANRIFE + R + ++ SL++ LSPLRE Sbjct: 109 TELAQYQQSADDKVKTLEETRQQLNRDFELLANRIFEEKSERFNRNSQTSLDTALSPLRE 168 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 QL F+++V+D + K+++ER +L+ E+ L+QLN QM+ +A+NLT ALKGDNKTQGNWGE Sbjct: 169 QLKDFKQKVEDVYDKDSKERVSLSAELGQLKQLNQQMSVDALNLTNALKGDNKTQGNWGE 228 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 V+L RVLE SGL +G EYETQ+S++++ + R QPDVIVRLP+ KD++ID+K++LV YERY Sbjct: 229 VILERVLEESGLHKGREYETQISLKSE-QGRGQPDVIVRLPEDKDLIIDSKVSLVHYERY 287 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 N+ +D R+ AL++H+ASV+NHIR L +K+Y+ L G+RTLD+VL+FIP+EPAF+ A + Sbjct: 288 CNSSEDDQRQQALKDHVASVKNHIRDLSQKNYEGLEGIRTLDFVLIFIPIEPAFMAAFEH 347 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 + EA + NI++V PTTLL LRTI ++WRYE Q++NA++IA +A ++DK F++ Sbjct: 348 DQSMFREAYEKNIIVVGPTTLLATLRTIQSIWRYERQNKNAEEIARQAGAMHDKFVGFVN 407 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI-NPDLAEQAVSQ 446 DM I + L KA + A+ KLS G+GN++ + LG ++K+ + N + EQ + Sbjct: 408 DMGKIEEHLSKASQAHEDALNKLSKGKGNLVGSTQRLEKLGAKVKKSMPNSVVDEQVFEE 467 Query: 447 D 447 D Sbjct: 468 D 468 >UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=A2SP89_METPP Length = 640 Score = 368 bits (945), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/395 (46%), Positives = 274/395 (69%), Gaps = 2/395 (0%) Query: 57 HWRAECEL--LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQ 114 H +A+ EL L +L + + A+L E+ TR E +QHA++K+ ++N++ LSEQ Sbjct: 219 HDKAKAELTGLKTAKDTLDAKVVEMTAELTELRTRSEQDRQHAEEKLELLVNAKNALSEQ 278 Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 F NLAN I E ++R EQN+ SL LL PLR QL F+ +V++ + +E ++R L ++ Sbjct: 279 FRNLANDILEDKSKRFAEQNQASLGQLLEPLRNQLSEFKGKVEEVYVQEGKDRSALAQQV 338 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 + L +LN ++Q+A NLT+ALKG KTQGNWGE++L RVLEASGLR+G+EY+ Q S Sbjct: 339 KQLVELNQTLSQDAKNLTQALKGQAKTQGNWGELILERVLEASGLRKGFEYKVQDSQTLA 398 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 SR+QPDV++ LP+ + +V+DAK++LVAY+RY +AE D +R +A+++H+ SVR HI+ L Sbjct: 399 DGSRLQPDVVIELPEDRKLVVDAKVSLVAYDRYVSAETDESRSAAVKQHLGSVRAHIKSL 458 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K YQ+L G+++ D+VL F+PVEPAF+LA+ EL +A +++LVSP+TLL +RT Sbjct: 459 SDKRYQELYGMQSPDFVLAFVPVEPAFMLAVTHDSELFMDAWNRSVLLVSPSTLLFVVRT 518 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 +A+LW+ E QSRNAQ IA R ++LYDK+ F+ D+ +G+ L++A+ Y +A KLS+GR Sbjct: 519 VAHLWKQEFQSRNAQDIAKRGAELYDKLCGFVGDLQKVGERLEQAKTAYDEAQSKLSTGR 578 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 GN + QAE + LGV + + L + A S +EE Sbjct: 579 GNAIRQAEMLKKLGVRPSKALPAALVQDAGSDEEE 613 >UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDJ8_LARHH Length = 495 Score = 360 bits (923), Expect = 9e-98, Method: Compositional matrix adjust. Identities = 194/414 (46%), Positives = 266/414 (64%), Gaps = 13/414 (3%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 QL ER + EL AA Q H R + E + Q + L A + TR++A Sbjct: 84 QLLERAGRLPELEAALQ------HSRGQQE-------AAQQLVAELRAQCAQAETRLQAE 130 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 ++K+ + + ++LS QF N+AN + E +RR EQNR+SL ++L PLRE+L F Sbjct: 131 VAQGEEKLALLREAREQLSVQFRNVANELLEEKSRRFVEQNRESLGAVLEPLRERLGEFT 190 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 R+V+ S+ +EA+ER +L E+ L +LN +++ +A+NLTRALKG NK QGNWGEVVL V Sbjct: 191 RKVESSYAQEAKERFSLQQEVLRLAELNRKISDDAVNLTRALKGSNKQQGNWGEVVLESV 250 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 LE+SGLR G EYE Q S + R QPDV+V LP+G+D+VID+K+TL AY RY AE+D Sbjct: 251 LESSGLRRGQEYEVQTSFTREDGQRHQPDVVVHLPEGRDIVIDSKVTLTAYSRYVEAEED 310 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 R+ AL++H+ +VR H++ L K Y L LR+LD+VL+FIPVEPAF+LA+ EL Sbjct: 311 AARQLALRQHLDAVRAHVKGLSAKRYDTLYDLRSLDFVLLFIPVEPAFMLAVTEDRELFA 370 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 +A N++LVSP+TLL LRTIANLWR QS NAQ+IA +A LYDK FI D+ IG Sbjct: 371 DAYARNVLLVSPSTLLATLRTIANLWRQAQQSHNAQEIARQAGALYDKFVGFIGDLDDIG 430 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + L + + + A KLSSGRGN++ Q E R LGV+ + I E+A + D Sbjct: 431 RHLTQTRQAFDGACNKLSSGRGNLVRQTERLRELGVKPGKSIPAGWKEKAGADD 484 >UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCG4_HAHCH Length = 507 Score = 353 bits (906), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 197/469 (42%), Positives = 286/469 (60%), Gaps = 42/469 (8%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL---------- 79 Q E+L REE VA L A + TQ CE + EV LQ N ++ Sbjct: 44 QIIEKLLAREEEVARLQEACAEKTQ------RCESMQREVGVLQQSNAAVRARMESIHER 97 Query: 80 -----------EADLREVTTRMEAAQQ--------------HADDKIRQMINSEQRLSEQ 114 +A+L E+T + AAQ H +K++ + S + L+++ Sbjct: 98 YVQVEAAAKDKDANLSELTQALSAAQSELASLKTAAAKEQLHHQEKLKLLEASREALTQE 157 Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 F+ LANRIFE S +++ E ++ +L ++L PL QL+ FR++V+D + KEAQ+R +L+ EI Sbjct: 158 FQLLANRIFESSTQKLSEFSQNNLKTILDPLNTQLNDFRKKVEDVYDKEAQQRFSLSAEI 217 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 + LQ LN +++ +AI LT ALKGDNK G WGEV+L R+LE SGL +G EYE Q + N+ Sbjct: 218 KKLQTLNERISDDAIKLTNALKGDNKAAGTWGEVILERILERSGLVKGREYEVQSAQRNE 277 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 A R+QPDVI+RLP+ K+VV+D+K++LVAYE+Y NA DD R L++H+ SVR HI+ L Sbjct: 278 AGRRIQPDVIIRLPENKNVVVDSKVSLVAYEQYHNASDDSARIDYLKQHVLSVRQHIKGL 337 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K YQ GL +LD+VL+FIP+E AF A+ L EA + N+++VSP+TLL LRT Sbjct: 338 SGKRYQDALGLNSLDFVLLFIPIEGAFAAAVQGDQSLFNEAFQLNVVIVSPSTLLATLRT 397 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 I N+WRYEHQS+NAQ+IA +A LYDK F+ D+ +GQ L + Q Y AM +L++GR Sbjct: 398 IHNIWRYEHQSQNAQEIARQAGYLYDKFVNFVQDLEEVGQRLQQTQGAYDTAMGRLATGR 457 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 GN++ + E + LG ++++ ++A EE R+V D A Sbjct: 458 GNLITRVEKLKQLGARAGKQLSESTLQRA-QMSEEGDSRTVSLSLGDGA 505 >UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A440_PELCD Length = 462 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 165/356 (46%), Positives = 255/356 (71%) Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 T++ ++ A +K++ + ++++++ +F++LA RIFE +R + +Q+R +L+ LL P R Sbjct: 91 TKLAEERKQAAEKLQLLNDAKEQMKLEFQSLAYRIFEDKSRNLVDQSRSNLDQLLHPFRA 150 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 QL F ++V +++ +EA+ER +L EI LQ+ N Q+ +AINLT ALKG KTQG WGE Sbjct: 151 QLKDFEKKVDETYQREARERFSLRQEIVRLQECNQQIQTDAINLTNALKGQVKTQGIWGE 210 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 +VL R+LE SGL +G EYE Q S + +++PD++V LP+ KD+V+D+K++L+AYERY Sbjct: 211 IVLERILEQSGLHKGREYEAQGSFRDAQGRQLRPDIVVHLPENKDIVVDSKVSLIAYERY 270 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 NA +D R AL++H+ S+ +HI+LL K YQ LPGLR+LD+VLMFIPVE AF+LAL+ Sbjct: 271 VNASEDEQRSLALRQHLTSLHSHIKLLQSKHYQALPGLRSLDFVLMFIPVEGAFMLALEE 330 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 L +A N+M+VSP+TLL+ LRTI N+WRYE+Q++NA +IA +A LYD F++ Sbjct: 331 DETLFRKAFAQNVMIVSPSTLLLTLRTIQNIWRYEYQNQNAVEIARQAGNLYDHFVRFVN 390 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 D+ IG L+K + Y QA K+L++GRGN++ +AE+ R LG++ + ++P + E A Sbjct: 391 DLEKIGDLLEKTRQTYGQAHKRLTTGRGNLVRRAESLRQLGIQNSKVLSPIIRENA 446 >UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaproteobacteria RepID=C4I883_BURPS Length = 654 Score = 344 bits (883), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 174/372 (46%), Positives = 260/372 (69%), Gaps = 1/372 (0%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 T L +L E+ TR EA +Q+A++K+ ++ +++ LS QF+ LA I E ++R EQN+ Sbjct: 248 TRLTDELTEIRTRTEAERQNAEEKLNLLLQAKEALSNQFKTLATEILEEKSKRFAEQNQT 307 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 SL LL PL+ +L F+ +V++ + +E ++R L+ ++R L +LN ++Q+A NLT ALK Sbjct: 308 SLGLLLEPLKTRLTEFQGKVEEVYVQEGKDRSALSAQVRQLVELNQALSQDAKNLTLALK 367 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 G KTQGNWGE++L RVLEASGLR+G EY Q + + SR QPDV++ LP+ + +V+D Sbjct: 368 GSTKTQGNWGELILERVLEASGLRKGDEYHVQDNRVREDGSRAQPDVVINLPEERKLVVD 427 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K++L+AYERY +AE D R AL++HI S+RNHI+ L K YQ L G ++LD+VL F+P Sbjct: 428 SKVSLLAYERYASAETDEERLIALRQHIDSIRNHIKSLSDKQYQALYG-KSLDFVLAFVP 486 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 +EPAF+LA+ EL +A + N++LVSP+TLL +RT+A+LWR E QSRNAQ IA R + Sbjct: 487 IEPAFMLAVTNDNELFMDAWRRNVLLVSPSTLLFVVRTVAHLWRQEAQSRNAQDIARRGA 546 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +LYDK+ F++D+ +G L +A+ Y A KL+ GRGNV+ QAE R +GV+ + + Sbjct: 547 ELYDKLCGFVEDLQLVGNRLGQARKAYDSAHSKLAIGRGNVIRQAEMLRDMGVKPSKALP 606 Query: 437 PDLAEQAVSQDE 448 LA+ A S+D+ Sbjct: 607 RSLADIASSEDD 618 >UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYL9_DESAC Length = 446 Score = 343 bits (880), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 164/359 (45%), Positives = 248/359 (69%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 E+TTR+E +Q + +K ++ ++++L++QF+ +A IF+ R+ E NR+ L+ LL+P Sbjct: 82 EMTTRLELERQQSAEKQALLLEAKEQLTQQFKVVAGEIFDERGRQFKEVNREELSQLLTP 141 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 LR+QLDGFR++V D + +ER TL E+ L+ LN QM+++A LTRALKGD K QGN Sbjct: 142 LRQQLDGFRQKVDDVHVTDVRERATLRQELEQLRGLNQQMSEDARQLTRALKGDRKVQGN 201 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE+VL R+LE SGLR G EYE Q S + ++PDVI+ LP+GKD+++D+K++L +Y Sbjct: 202 WGELVLERLLEQSGLRRGVEYEVQGSFRDADNRLLRPDVIIHLPEGKDIIVDSKVSLSSY 261 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 ER +D R+ L++H+ +V H+ L K Y L G+R+LD+V+MF+P+E A ++A Sbjct: 262 ERSCREDDPEQRQQCLKQHVQAVCQHVLGLSEKHYANLKGVRSLDFVVMFMPIEAALVVA 321 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 L + EL EA ++++VSPTTLL LRTI N+WR+E Q++NAQ IAD+A +YDK+R Sbjct: 322 LQQDGELFNEAFDRHVVMVSPTTLLATLRTIENIWRFERQNQNAQAIADKAGAIYDKLRG 381 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F+++M +G LD Y AM KLS GRGN+++QA F LGV++K+ + + E+A Sbjct: 382 FVEEMEKLGTQLDTVGHTYTAAMNKLSQGRGNLISQASRFVDLGVKVKKTLPATVMERA 440 >UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0V3_9NEIS Length = 531 Score = 342 bits (878), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 186/424 (43%), Positives = 272/424 (64%), Gaps = 16/424 (3%) Query: 32 AEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRME 91 A QLA R E +L A++ Q+ + E EL + T L A +E+ T ++ Sbjct: 118 ASQLAARAEQGRQLEASQLQVIK------ERELATRLAEDI----TRLTAREQELVTTLD 167 Query: 92 AAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 +Q +K+ + +++ LS QF+ LA+ I E +RR EQN+++L SLL+PL E++ Sbjct: 168 KERQQTREKLVLLDEAKEALSNQFKALASEILEEKSRRFTEQNKENLGSLLTPLHERIQN 227 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN-KTQGNWGEVVL 210 F + VQD++ K+++ER TL E+R LQ+LN ++ +A+ LT AL G N K QG WGE+VL Sbjct: 228 FGKLVQDTYDKDSKERLTLEQELRRLQELNTRLNHDAVALTNALTGANSKAQGTWGEMVL 287 Query: 211 TRVLEASGLREGYEYETQVS----IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 +VLE SGL + EY QVS E+ + R QPDV++ LP+GK +V+D+K++L AY R Sbjct: 288 EKVLETSGLHKDREYRVQVSDTVETEDGSSRRYQPDVVIDLPEGKQLVVDSKVSLNAYVR 347 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 Y A DD RE+ L+ HIA++R HIR L K YQ L L TLD+V MF+PVEPA+LLA+ Sbjct: 348 YTAAGDDVLREAELKAHIAAIRAHIRTLSEKRYQDLYKLNTLDFVFMFVPVEPAYLLAVQ 407 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ+IA ++ +YDK F+ Sbjct: 408 HDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQSGAMYDKFVGFV 467 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA-EQAVS 445 D M +G+ LD +D + AMKKL SGRGN+++ AE R LG++ +++ LA E + Sbjct: 468 DSMEKLGKQLDTTRDTFGDAMKKLQSGRGNLISSAEKLRKLGIKSNKQLASHLALESSDE 527 Query: 446 QDEE 449 DEE Sbjct: 528 ADEE 531 >UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF2_9GAMM Length = 450 Score = 341 bits (874), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 160/353 (45%), Positives = 251/353 (71%), Gaps = 7/353 (1%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 R L ++N+ LE ++ + Q H ++I + ++++ LS +FENLANRIF+ + Sbjct: 61 RDLLTLNSGLE-------QKLLSQQNHYQEQIALLADAKKTLSSEFENLANRIFDEKQTK 113 Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 Q+++++ LSPLR + FR+QV+ ++ KE ER+ L +I LQ+ Q++ +A+ Sbjct: 114 FSLQSKEAMEVTLSPLRRDIGDFRKQVESAYEKENAERNKLVGQISELQKQTMQVSADAV 173 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 +L AL+GDNK QGNWGE +L ++LE SGL G EY TQV+++++ R PDVIV LP+ Sbjct: 174 SLATALRGDNKAQGNWGEFILEKLLEDSGLSNGREYSTQVALKDETGKRRNPDVIVHLPE 233 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 G+D+VIDAK++LV YERYF+AED+ +++ L++H++S+R HI+ L KDY++L G+ +LD Sbjct: 234 GRDIVIDAKVSLVDYERYFHAEDEESKKLCLRQHLSSLRAHIKGLSSKDYEKLEGVNSLD 293 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +VL+F+P+E AF+LALD PE++ +A I+LVSP+TL+V LRTI NLWRY Q+ NAQ Sbjct: 294 FVLIFVPIESAFMLALDHDPEMMRDAYDRGIILVSPSTLMVTLRTIKNLWRYADQNLNAQ 353 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 IAD+A LYD+ L+I+ + +G+ ++K+Q+ + A K+LSSGRGN++ + E Sbjct: 354 LIADKAGGLYDQFVLYIESLDEVGKHIEKSQEAWDTAHKRLSSGRGNLIRRTE 406 >UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=Pseudomonas RepID=RMUC_PSEAE Length = 453 Score = 340 bits (872), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 188/451 (41%), Positives = 285/451 (63%), Gaps = 20/451 (4%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAA-----------KQQITQ 54 M+ +A +A L A + +++ +QL ER A AA +Q+ +Q Sbjct: 1 MLGERLATAQLAQDGLNAQLETSREAYQQLGERHARFAGEVAALRREAELMGEERQRASQ 60 Query: 55 SE-HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSE 113 +E W +E + E+R L S +L A+LRE + E+ QQ D + ++ L Sbjct: 61 AEARWASERQGREEELRRLASERAALAAELRE---QQESHQQRLTD----LQSARDELRA 113 Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 QF LA +IF+ +R E ++Q L +L PL+E++ F ++V++S+ +EA+ER +L+ E Sbjct: 114 QFAELAGKIFDEREQRFAETSQQRLGQMLDPLKERIQAFEKRVEESYQQEARERFSLSKE 173 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 + LQQLN ++ +EA NLTRALKG KTQGNWGE+VL RVLE +GL +G EYETQVS++ Sbjct: 174 LERLQQLNLRLGEEATNLTRALKG-QKTQGNWGELVLERVLEHAGLEKGREYETQVSLKG 232 Query: 234 DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRL 293 R QPDV++RLP K VV+DAK++L AY++Y A+DD R+ AL++H+ S+RNH++ Sbjct: 233 AEGERFQPDVLIRLPGDKQVVVDAKVSLTAYQQYIAADDDLLRQQALKQHVTSLRNHVKG 292 Query: 294 LGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALR 353 L KDY++L GL +LD+VL+F+P+E AF AL +P L +A NI++VSPTTLL LR Sbjct: 293 LSGKDYRRLEGLHSLDFVLLFMPIEAAFSTALQAEPNLFQDAFAQNIVIVSPTTLLATLR 352 Query: 354 TIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 I +LWR E Q++NA++IA+RA LYDK LF+ D+ +G L + Y A KL+ G Sbjct: 353 VIDSLWRQERQNQNAREIAERAGSLYDKFVLFVQDLDEVGSRLQQLDKAYAAARNKLTEG 412 Query: 414 RGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 RGN+++++E + LG + + D ++A+ Sbjct: 413 RGNLISRSEQLKLLGARASKSLPTDWLDRAL 443 >UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTA9_CHRSD Length = 500 Score = 337 bits (865), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 188/430 (43%), Positives = 275/430 (63%), Gaps = 17/430 (3%) Query: 43 AELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA--AQQHAD-- 98 A+L AA++Q +++ +CE R L L A LRE R+E Q+HA Sbjct: 69 AQLDAAREQGLETQRRLTQCE------RELGDRQEQL-ATLRERHGRLETQREQEHAHHA 121 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 +K+ + + RL++ FE LA RIFE + Q+R+SL +LL+P REQ+ FR ++++ Sbjct: 122 EKLALLEEARTRLTQDFEALAGRIFEERQQAFSAQSRESLETLLAPFREQVGDFRARLEE 181 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 G+ +ER +L +I +L LN Q+ +EA NLTRALKGD K QG+WGEV+L VLE SG Sbjct: 182 IHGQSLRERSSLKTQIEHLATLNRQITEEASNLTRALKGDKKMQGDWGEVMLESVLERSG 241 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRES 278 LR EY+ +VSIE DA R +PD ++ LP + +++DAK++L AY RY NAEDD TR Sbjct: 242 LRRDIEYKREVSIEGDA-GRQRPDAVIYLPDQRHLIVDAKVSLNAYVRYVNAEDDATRAQ 300 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN 338 AL+ H+ +VR HI L +DY +LPGL + D+V +F+PVEPAF +A L +A Sbjct: 301 ALRAHVQAVRGHIEALSGRDYPRLPGLNSPDFVFLFMPVEPAFAVAFQHDETLFHDAFAR 360 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 +I++V+PTTLL +LRT+A+LW E Q+ NA+ IA+RA KL DK R F+D + +G+ L++ Sbjct: 361 DIVVVTPTTLLASLRTVASLWTLERQNDNARVIAERAGKLLDKFRGFVDSLEEVGRHLER 420 Query: 399 AQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 A +YRQAM +LS+G+G++++QA + LGV +KR++ P+ Q V D E +V E Sbjct: 421 ADGSYRQAMGRLSTGQGSLVSQALMLKRLGVRMKRDL-PEHLTQGVDDDSE----AVSED 475 Query: 459 PNDEAYQRDD 468 + E DD Sbjct: 476 ESGEPGGADD 485 >UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=A4SV40_POLSQ Length = 424 Score = 337 bits (864), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 163/348 (46%), Positives = 233/348 (66%) Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 +I + +++ L+ QF+NLAN I E ++R EQN SL++LL PL+ +L F+ QV S Sbjct: 77 RIESLNEAKEALTSQFKNLANEILEDKSKRFTEQNAASLDALLKPLQTKLTEFKEQVSTS 136 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 +G EA+ER L EI L LN +M+ E +LT+ALKGD+K QGNWGE+VL +LE+SGL Sbjct: 137 YGNEARERFALKSEIERLANLNLRMSDETRSLTQALKGDSKVQGNWGELVLESILESSGL 196 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 R+G EY Q S SR+QPDV+++LP+G+ +V+D+K+++ AY R+ D E Sbjct: 197 RKGEEYVVQDSHTQTDGSRLQPDVVIKLPEGRSLVVDSKVSITAYARHAETTDPELAEKE 256 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L HI S+R HI+ L K+Y L G+ ++D+VLMF+P+EPAFLLAL P L EAL N Sbjct: 257 LAAHIQSLRQHIQGLSGKNYSSLYGVGSVDFVLMFVPIEPAFLLALKTAPNLYQEALAKN 316 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 I+LV P+TL+ LRT+A+LWR +HQ+RNA +IA + LYDK F+DD+ +GQ LD+A Sbjct: 317 IVLVCPSTLMATLRTVAHLWRQDHQNRNALEIAKQCGNLYDKFVGFVDDLEKLGQRLDQA 376 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 Q +Y A KL +G+GN++ AE R LGV+ + ++ L E + D Sbjct: 377 QTSYHDAFNKLKTGKGNLIRSAEKVRELGVKPSKNLSTPLIESSAEND 424 >UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepID=C5TKH2_NEIFL Length = 600 Score = 333 bits (854), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 179/408 (43%), Positives = 261/408 (63%), Gaps = 7/408 (1%) Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 AE L E +L N +L+ + T+ E +Q A++K+ + ++ + LS+QF+NLA Sbjct: 194 AEKGRLKQEYAALLEQNHALQVQNERLNTQSEKDRQAAEEKLSLLADARKNLSDQFQNLA 253 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 N I E +RR EQN L LL+PL E++ GF VQ ++ KEA+ER T+ +E++ LQ Sbjct: 254 NTILEEKSRRFTEQNHDHLQQLLNPLNERIHGFSELVQQTYEKEAKERLTIENELKRLQT 313 Query: 180 LNAQMAQEAINLTRALKGD-NKTQGNWGEVVLTRVLEASGLREGYEYETQVS-IENDA-- 235 LN Q+ +A LT AL G NKTQGNWGE++L VLE SGL++G EY Q S + ++A Sbjct: 314 LNTQLHHDAKALTTALTGTQNKTQGNWGEMILESVLENSGLQKGREYIVQASSVRHEADG 373 Query: 236 -RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 + R+QPDV++ LP K +VID+K++L AY RY + E L H+AS+R HI+ L Sbjct: 374 TQRRLQPDVLINLPDNKQIVIDSKVSLTAYVRYTQS-TGAEAERELANHVASIRAHIKSL 432 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 KDY L G++TLD+V MF+PVEPA+LLAL P L E IML P+TLL LRT Sbjct: 433 AAKDYTDLEGVKTLDFVFMFVPVEPAYLLALQHDPNLFQECFDKRIMLTGPSTLLATLRT 492 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 +AN+WR E Q++NA IA+ SKLYDK F++ M I ++L +AQ ++ A +L SGR Sbjct: 493 VANIWRNEQQNQNALAIAEAGSKLYDKFVGFVESMDGINKALGQAQSQFQTAYGRLVSGR 552 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY-RLRSVPEQPND 461 GN+++ E R LG++ +++ DL E+A+S++E++ L + +Q ND Sbjct: 553 GNLISSTEKLRKLGIKAGKQLQRDLLEKAMSENEDHAALPTAQDQEND 600 >UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=Neisseria RepID=RMUC_NEIMA Length = 594 Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 178/404 (44%), Positives = 257/404 (63%), Gaps = 5/404 (1%) Query: 45 LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM 104 +AA++QI + AE E L LQ L + + T++E + +++K+ + Sbjct: 172 FAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIEQERLASEEKLSLL 231 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 + + LS+QF+NLAN I E +RR EQNR+ L+ +L+PL E++ GF V+ ++ KE+ Sbjct: 232 GEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERIQGFGELVKQTYDKES 291 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD-NKTQGNWGEVVLTRVLEASGLREGY 223 +ER TL +E++ LQ LNAQ+ EA LT AL G NK QGNWGE++L VLE SGL++G Sbjct: 292 RERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWGEMILETVLENSGLQKGR 351 Query: 224 EYETQVSI----ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 EY Q + E+ R+QPDV+V LP K +VID+K++L AY RY A D T Sbjct: 352 EYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVSLTAYVRYTQAADADTAARE 411 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L H+AS+R H++ L KDY L G+ TLD+V MFIPVEPA+LLAL L E Sbjct: 412 LAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVEPAYLLALQNDAGLFQECFDKR 471 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 IMLV P+TLL LRT+AN+WR E Q++NA IAD KLYDK F+ + ++G+ +D+A Sbjct: 472 IMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGGKLYDKFVGFVQTLESVGKGIDQA 531 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 Q++++ A K+L+ GRGN++ +AE R LGV+ +++ DL E+A Sbjct: 532 QNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQLARDLTERA 575 >UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B0TZE2_FRAP2 Length = 472 Score = 332 bits (851), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 165/382 (43%), Positives = 252/382 (65%), Gaps = 9/382 (2%) Query: 68 EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN 127 E+++ +S + LE L+E M+ DK+ + NSE +L +FENLAN+IFE ++ Sbjct: 99 EIKNYRSQVSMLETQLKEQNVAMK-------DKLELLQNSEAKLKTEFENLANKIFEDNS 151 Query: 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 +++ E+N++SLNS+L+P+REQL F+++V+D + KE+ R L +E++ L++LN +M E Sbjct: 152 KKLSERNQESLNSVLNPVREQLKDFKQKVEDVYDKESTARGALQNELKTLKELNQKMTAE 211 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 A NLT AL+ K QG WGE+VL VLE SGLREG+EY + +D +PDV+V+L Sbjct: 212 AHNLTNALRSSTKQQGIWGEMVLENVLEKSGLREGFEYFREKHTTDDEGKAYRPDVVVKL 271 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P +D++IDAK +L AY Y A D+ +++ L+ HI S+R+HI+ L K+Y+ L G+ + Sbjct: 272 PDSRDIIIDAKTSLFAYNDYM-AADEEQKQTHLKAHIKSIRDHIKGLANKNYENLKGINS 330 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 LD++ MFIP+E A LLALD L EA K I+LVSPTTLLVALR + N WRYE Q+++ Sbjct: 331 LDFIFMFIPIEGALLLALDNDTNLYDEAFKQKIILVSPTTLLVALRAVENTWRYEKQAQS 390 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 I RA +LY K F++D+ +G+S+ A +Y A KL +GRGN++ Q E + + Sbjct: 391 ITDIYSRAEELYKKFVGFVEDLEKVGKSIADANKSYENAFSKLKTGRGNLIGQVEKLKVI 450 Query: 428 G-VEIKREINPDLAEQAVSQDE 448 ++ K+E+ +L E A+ +E Sbjct: 451 SNIKPKKELESNLVENAMGDNE 472 >UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJZ5_9BACT Length = 475 Score = 332 bits (850), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 177/462 (38%), Positives = 288/462 (62%), Gaps = 28/462 (6%) Query: 6 MVYAVIALV-GVAIGWLFAS-----------YQHAQQKAEQLAEREEMVA----ELSAAK 49 +VYA++ L+ G AI + + + +A+ AE+EE + E+S + Sbjct: 3 IVYALLGLIIGAAIMFFLKKDSGTSRELEIELEKLRDQAKSTAEKEEKIQVQQNEISTLR 62 Query: 50 QQITQSEHWRAECELL--------NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI 101 ++ S E + L LQ I T L A L+ T+M+A + D+K+ Sbjct: 63 AEVASSTSLLNERQKLISRFEDEAQKSTSQLQEIIT-LNATLK---TQMQADRTLHDEKL 118 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + + S++ LS F+ +AN+IFE ++ + N++ L+ L PL+EQ+ F +QVQD + Sbjct: 119 QSLKASKEELSRNFKEIANKIFEEQSKNQSQANKEKLDLTLKPLKEQIHTFSKQVQDCYN 178 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 KEA+ER +L EI++L++LN +M+++A+ LT+ALKGD+K +G WGE++L RVLEASGLR Sbjct: 179 KEAKERFSLEKEIKSLKELNTRMSEDALQLTKALKGDSKARGTWGELILERVLEASGLRN 238 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQ 281 G EY TQV+ + R PD IV LP K ++ID+K++LVAYE+Y ++ D+ R + + Sbjct: 239 GSEYFTQVTETAEDGKRYMPDAIVHLPDEKQIIIDSKVSLVAYEKYCSSADEDERLTLRK 298 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 H+ SV+NHI+ L K Y+ LPG+ +LDYVL+F+PVE AF LA++ +L +A K NIM Sbjct: 299 AHLDSVKNHIKELSDKSYENLPGINSLDYVLLFMPVEGAFRLAVEADEKLFLDAYKKNIM 358 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 LVSP+TLL+ LRTI+ +W++E+Q+RN Q I D+A LY K +++ +G+ +++A+ Sbjct: 359 LVSPSTLLITLRTISKIWQFENQNRNTQAIVDKAEALYSKFVGYVESFQKVGKGIEQARK 418 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 Y A +L +GRGN++ ++ LG++ K+ + ++ +A Sbjct: 419 AYDSAEGQLMTGRGNLIRTCKSLEELGIKSKKAMPKEVLHKA 460 >UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MYU2_9GAMM Length = 507 Score = 329 bits (843), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 166/410 (40%), Positives = 265/410 (64%), Gaps = 11/410 (2%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 QL E ++ + + Q++ + EH E LN E+ L++ L++ E Sbjct: 101 QLKHNEAVLTQSAKDAQKLIEKEH---RIESLNQEISELKTA-------LKQEQVEREKE 150 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 Q+ +K+ + ++++LS++FENL+N+IF+ ++ ++ +++ L+SLL+P ++QL+G R Sbjct: 151 QESLHEKLALLEQNKKQLSQEFENLSNKIFDEKYKQFNQTSKEGLSSLLNPFKDQLEGLR 210 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 ++V D + E+++R +L +I L +LN Q+ +EA LTRALKG+ KTQGNWGE+VL V Sbjct: 211 KKVDDVYVAESKDRASLKAQIGELHKLNRQITEEASALTRALKGEKKTQGNWGELVLETV 270 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 LE SGLR G EY + SI N R +PDVI+ LP+ K +++DAK++LVAY Y NAE D Sbjct: 271 LEKSGLRAGEEYVREKSI-NTEGDRYRPDVIINLPENKHIIVDAKVSLVAYTDYVNAETD 329 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 R+ L+ H+ +V+ HI+ L K Y QLPG+ + D+V +F+PVEPAF++A L Sbjct: 330 DERQQHLKTHVQAVKAHIKALSEKPYDQLPGVNSPDFVFLFMPVEPAFMVAFQYDDSLFN 389 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 EA + I++V+PTTLL +LRT++NLW E Q+++A+Q+A++A K++DK+ F++ M +G Sbjct: 390 EAFEKRIVVVTPTTLLASLRTVSNLWSIERQNKHAKQLAEQAGKVHDKLVGFVESMEKVG 449 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 L Q Y A +L GRGN+L+QA F+ LGV K+E+ + E A Sbjct: 450 AQLTTVQKTYDTAWNQLKEGRGNLLSQAHKFKDLGVRSKKELPKHVMETA 499 >UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC5_SULNB Length = 515 Score = 327 bits (837), Expect = 8e-88, Method: Compositional matrix adjust. Identities = 165/429 (38%), Positives = 270/429 (62%), Gaps = 15/429 (3%) Query: 26 QHAQQKAEQLAEREEMVAEL----SAAKQQITQSE-----------HWRAECELLNNEVR 70 QH Q E+LA + E VA L S +++++Q+E + E + L Sbjct: 82 QHFSQVREELASKTEQVATLQTKNSVLEKELSQTETQLENLEKMYENLLKEHKELQGRFE 141 Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 LQ N + + + ++E +HA K+ M ++ L +FE LA +IF+ ++ + Sbjct: 142 HLQEENNRFQVNNARLLMKLETESRHASSKLEMMQEHKKELKTEFERLAKQIFDGNSEKF 201 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 E ++Q+L+S++ PL+ Q++ F++QV D++ E+Q+R L +EI +L++LN +++ +AIN Sbjct: 202 AEFSKQNLDSMIKPLQTQIEEFKKQVSDTYNAESQDRAVLKNEINSLKELNEKISTDAIN 261 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 LT ALKG++K QG WGE+VL VLEASGLR+G+E+E +VS+ D ++PDVIV LP Sbjct: 262 LTNALKGESKQQGVWGEMVLEHVLEASGLRKGHEFEREVSLRTDDNEVLRPDVIVHLPDN 321 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 +D++IDAK +L++YER+ NAED+ + L H+ S++ HI L K+Y++L + TLD+ Sbjct: 322 RDLIIDAKTSLISYERFINAEDEANKAKHLAAHLNSIKMHIEELSNKNYERLKEVNTLDF 381 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 + MF+P+E A +AL+ + A K I+LV PTTLLVA+R + N+W+YE Q++NAQ+ Sbjct: 382 IFMFMPIEGALAVALEHDNSIYDNAFKKKILLVGPTTLLVAMRAVENVWKYERQNQNAQE 441 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 IA RA +YDK F +D+ I + +D Q ++ A KLS G+GN++ Q + + LG + Sbjct: 442 IARRAGAMYDKFVRFSEDLIKISKQIDAIQSSFSAAKNKLSDGKGNLVRQVQQLKELGAQ 501 Query: 431 IKREINPDL 439 ++I +L Sbjct: 502 TNKQIPKEL 510 >UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4X023_9GAMM Length = 443 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 159/329 (48%), Positives = 231/329 (70%) Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 S +L ++FENL+ ++ + +++ EQ++Q L+ +L P REQL FRR+V E + Sbjct: 94 SRNQLKQEFENLSGKVLDQRGKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRA 153 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 + +L ++ +L+ LN QM ++A NLT ALKG KTQGNWGE++L RVLE+SGL G EYE Sbjct: 154 QASLIEQLGHLKSLNQQMHEDARNLTDALKGQAKTQGNWGEMILERVLESSGLTRGREYE 213 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 TQV++++++ R PD IV LP+ KDVVIDAK++LVAYER +A RE AL++H+ S Sbjct: 214 TQVTLKDESGQRRLPDAIVHLPENKDVVIDAKVSLVAYERLSSASTSEEREQALRDHLTS 273 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 +R+HI+ L KDY L G+R+LD+VL+FIP+E AF++A+++ L T+A NI+LVSPT Sbjct: 274 LRSHIKGLDTKDYSGLEGIRSLDFVLLFIPIEGAFMVAMEQDSSLYTDAFARNIVLVSPT 333 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TLLV LRTI N+WRYE+Q+RNA IADRA K+ D++ L + M +G + KAQ + Sbjct: 334 TLLVTLRTIQNIWRYEYQNRNALDIADRAGKICDQVSLIGESMDDLGDKIGKAQLAWDTT 393 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 K+LS GRGN+ QA+ + LG + +R + Sbjct: 394 FKRLSRGRGNLYRQAQQLKDLGAKARRAL 422 >UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRK2_DESAD Length = 474 Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 162/422 (38%), Positives = 273/422 (64%), Gaps = 10/422 (2%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 H Q++ + A EE +L K+++ Q RA+ L + ++L + Sbjct: 52 HLQEQLQLGARLEEQATQLPELKKELAQQ---RAQK-------HKLTTAYSNLYGKYKAT 101 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 ++ ++ +K+ + +++ LS++F++LA I E +++ +QN ++ +L+PL Sbjct: 102 KANLDNEKKQGQEKLTLLQEAKEELSDKFKSLAGEILEEKSKKFTDQNATNIKQILAPLG 161 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 ++ F+ QV+ ++ +E ++R L +++ L LN Q++ +A NLT+ALKG +KT+G+WG Sbjct: 162 VKIHEFQEQVEKAYFQEGKDRSELAAQVKQLMNLNRQLSDDAHNLTKALKGQSKTRGDWG 221 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E++L RVLEASGLR+ +EY QVS +R+QPDV++ LP+ K +V+D+K++L Y + Sbjct: 222 ELILERVLEASGLRKDHEYTVQVSHTRQDGTRVQPDVVIHLPEEKHLVVDSKVSLTDYLK 281 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 Y AED+ RE AL+ HI S++ H++ L K+YQ L G+++ D+V+MF+P+EPAF LA+ Sbjct: 282 YTEAEDETKREVALKGHINSIKAHLKGLSTKNYQDLYGIKSPDFVIMFVPIEPAFALAIS 341 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 L EA N+++VSP+TLL +RT+A++WR E Q++NAQ+IA+R + LYDK R F+ Sbjct: 342 NDVALWQEAWNKNVLIVSPSTLLFVIRTVAHIWRQERQNQNAQEIANRGAILYDKFRNFV 401 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 DD+ +G+ + + QD+Y +A KL +G GN++ QAE + LGV+ KR I DL E+A+ Sbjct: 402 DDLEKVGERIRQTQDSYEKARTKLCNGSGNLIRQAEMLKELGVKPKRSIKKDLTEEALGS 461 Query: 447 DE 448 DE Sbjct: 462 DE 463 >UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacteria RepID=Q7NV71_CHRVO Length = 493 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 181/425 (42%), Positives = 269/425 (63%), Gaps = 25/425 (5%) Query: 21 LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN--TS 78 L AS + A+ A QLA REE L A E RSLQ Sbjct: 71 LDASQREARGLASQLAAREEQGRVLEAL-------------------EARSLQQGQDIMR 111 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 L A +E+ T+++ ++ + +K+ ++ + Q LS+QF+ LA+ I E ++R EQN+ +L Sbjct: 112 LTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKSKRFTEQNQNNL 171 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG- 197 +LL+PL E++ F + VQD++ K+++ER TL E++ LQ+LN ++ +A+ LT AL G Sbjct: 172 GALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTNALTGA 231 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVS--IE-NDARSRMQPDVIVRLPQGKDVV 254 +K QG WGE+VL +VLE SGL + EY QVS +E +D R QPDV++ LP+GK +V Sbjct: 232 SSKAQGTWGEMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPEGKQLV 291 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 +D+K++L AY RY A+ + RE+ L+ HIA++R HIR L K YQ L L TLD+V MF Sbjct: 292 VDSKVSLNAYVRYTAADGEEAREAELKGHIAAIRAHIRTLSDKRYQDLYKLNTLDFVFMF 351 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 IPVEPA+LLA+ L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ+IA + Sbjct: 352 IPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQ 411 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 +YDK F+ +M +G+ LD ++D + AMK+LSSGRGN++ AE R LG+ ++ Sbjct: 412 GGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGIRNNKQ 471 Query: 435 INPDL 439 + L Sbjct: 472 LPSQL 476 >UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F9EE Length = 423 Score = 326 bits (835), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 158/371 (42%), Positives = 245/371 (66%) Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 +N ++ SLQ NT + ++ +++ QQ + +K+ M +EQ+LS++FE LAN+IFE Sbjct: 50 MNAQLTSLQEANTEYKVANGALSASLQSLQQSSKEKMAIMQQAEQQLSDKFERLANQIFE 109 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 ++ N+QS++ ++ PL+ +LD F+ Q+ +E ER L EI +L+ LN + Sbjct: 110 QKTKQFSHVNQQSMHQVVQPLQAKLDEFKHQISQQSRQEGLERAALKQEIHSLKTLNETI 169 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 +A+ LT ALKGDNK QGNWGEVVL +L GL EG E+ QVSI +D +QPD++ Sbjct: 170 NVQALALTEALKGDNKQQGNWGEVVLESILSNCGLTEGQEFIRQVSIRDDQGRLLQPDIV 229 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 V LP K V+ID+K++L AYER F A DD TR S + H+ S+R H++ L +KDY + G Sbjct: 230 VNLPNNKAVIIDSKVSLTAYERMFKATDDSTRASYCKAHLQSIRQHVKGLSQKDYSRAYG 289 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + +LDYVL+F+ E AF AL+ P LI +AL+ NIMLVSP+ L++AL+TI N+W+ E + Sbjct: 290 IESLDYVLLFLASEAAFQTALNEDPNLINDALQQNIMLVSPSNLMIALKTINNIWQTEKR 349 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 +Q+IA++A+KL+DK+ F+ +M IG+ ++ Q+ Y AMKKLS+GRG++++ Sbjct: 350 INMSQEIAEQATKLHDKLAGFVQEMEKIGKQINMTQNTYENAMKKLSTGRGSIVSMGNKL 409 Query: 425 RGLGVEIKREI 435 +GV+ + + Sbjct: 410 EAMGVKTFKHL 420 >UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ES75_ARCB4 Length = 399 Score = 324 bits (830), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 157/342 (45%), Positives = 235/342 (68%), Gaps = 4/342 (1%) Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 +++ +KI + N++Q++ +FENLAN++F+ ++ + +L +LS +EQLD F Sbjct: 53 KENLKEKINFLENNKQQMKLEFENLANKLFDEKEKK----STTNLTFVLSSFKEQLDSFS 108 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 ++V D + E ++R +L EI+NL++LN Q++ +AINLT+ALKG NKTQG+WGE++L+ + Sbjct: 109 KRVNDIYNDETKQRSSLLTEIKNLKELNNQISNDAINLTKALKGQNKTQGDWGEMILSSI 168 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 L+ +GLREG EY Q S + R++PDVIV LP KD+VID+K++L AY Y AE++ Sbjct: 169 LDQTGLREGKEYTIQGSFTSAEGKRLRPDVIVHLPSNKDIVIDSKVSLNAYINYSKAENE 228 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 ++ A +E + S+ +HI+ L K Y+ + G+RTLD+VLMFIP+E AFLLA L Sbjct: 229 DEKQQASKELVKSITSHIKDLSSKSYENIDGVRTLDFVLMFIPIEGAFLLATSSDDNLFK 288 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 A NNIMLVSP+TL V LRTI N+WR EHQ+ NAQ I+ +A+ LYDK F+ D+ IG Sbjct: 289 LAFDNNIMLVSPSTLYVTLRTIENIWRNEHQNENAQLISKKAADLYDKFVAFVGDIEDIG 348 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 ++ + Q Y AM KLSSG GN++ + E F LGV+ K+++ Sbjct: 349 TNITRTQKAYDGAMNKLSSGNGNLIRRTEEFLELGVKPKKQL 390 >UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ77_CELJU Length = 493 Score = 321 bits (822), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 160/379 (42%), Positives = 255/379 (67%) Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 L +++ Q + + LE + +R E +++ +++ + ++ L+ +FENLA +IFE Sbjct: 99 LEADLQGKQQLLSELEQTHAALVSRTEQERRNFAEQLALLQSARTDLTREFENLAGKIFE 158 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 ++ ++ L++ L PLR QL FR++V+D + KE+ ER+ L ++ LQ+ ++ Sbjct: 159 AKQQQFQHNSKSLLDTTLDPLRSQLTEFRKKVEDVYEKESAERNRLAGQVLELQKQAQKI 218 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 ++AI+L +ALKG++KTQGNWGEVVL R+LE SGL++G EY+ QV+ SR PDVI Sbjct: 219 GEDAISLAQALKGNSKTQGNWGEVVLERLLEESGLQKGREYDAQVNFTATDGSRRMPDVI 278 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 V LP+ KD+VIDAK +L YE+Y + ED+ +R+ L HI S+RNHI+ L KDY+++ G Sbjct: 279 VHLPEQKDIVIDAKCSLSDYEKYCSTEDESSRKQYLAAHIQSLRNHIKQLSIKDYEKIDG 338 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 +++LD+V +FIP+E AF+LAL P L EA +I+LVSPTTLL LRT+ N+WRYE Q Sbjct: 339 IKSLDFVFIFIPIEAAFMLALQEDPGLYREAYDRHIILVSPTTLLATLRTVENIWRYEKQ 398 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 ++NA++IA A L+D+ L +D + ++G L K Q+ Y +A ++L+SGRGN++ + + Sbjct: 399 NKNAERIAREAGALHDQFVLMLDALDSVGNQLHKTQEAYAKARERLASGRGNLIKRVDDI 458 Query: 425 RGLGVEIKREINPDLAEQA 443 R LG + K+ I+ + E+A Sbjct: 459 RRLGAKTKKVISGTVLEEA 477 >UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UB0_SULDN Length = 407 Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 151/374 (40%), Positives = 248/374 (66%), Gaps = 1/374 (0%) Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 W A + L NE+ + + SL +T R+ + +K + +++++ +F+ Sbjct: 19 WLAVIKNLKNELSFEKEKSASLLNQNAVLTERINGINEKNQEKFILLEQNKEQMRLEFKE 78 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 LA I E+++++ QN+++L+ +++P+REQ + F++Q+ D + KEA++R L EI+++ Sbjct: 79 LAQSILENNSQKFSLQNQENLSKMITPMREQFNEFKKQIDDVYIKEAKDRSMLQAEIKSI 138 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA-R 236 +++N QM+++A NLT+ALKG++K QG WGE+VL VLE SGLR G EYE +V++E++ + Sbjct: 139 KEINHQMSKDAQNLTKALKGESKKQGVWGEMVLESVLEHSGLRVGVEYEREVTLEHEHNQ 198 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 SR +PDVIV LP G+D+++DAK +LVAYE+Y + EDD +E L EHI S++ HI+ L Sbjct: 199 SRYRPDVIVHLPDGRDIIVDAKTSLVAYEQYSSVEDDEHKERFLNEHIISIKKHIKELSE 258 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 KDY L G++TLD+V MF+P+E A L+A++ L A K +++LV PTTL+V+LR + Sbjct: 259 KDYANLKGIKTLDFVFMFVPIESALLMAMEHDKTLFDHAFKKSVILVGPTTLMVSLRAVE 318 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 N WRYE Q +NAQ+IA RA L+DK F++ + +G+ + Q Y + KL +G G+ Sbjct: 319 NSWRYEKQQKNAQEIAKRAGMLFDKFSGFVESIEKLGKQITTVQKTYDETFSKLHTGSGS 378 Query: 417 VLAQAEAFRGLGVE 430 + +Q + LG + Sbjct: 379 ITSQFQKLESLGAQ 392 >UniRef50_B9L835 DNA recombination protein RmuC family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L835_NAUPA Length = 533 Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 152/362 (41%), Positives = 248/362 (68%), Gaps = 5/362 (1%) Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 +E+ T++E +++ ++K+ + SE++L E FENLAN I E +N ++ + +++SL+ +L+ Sbjct: 173 QELKTKLEESEKAFEEKLELLKKSEEKLKESFENLANEILEKTNEKMTKTSKESLSQILN 232 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 PL+ Q+ F+ +++ EA++ L +E++NL++L+ +++ +A NLT+ALKG++KTQG Sbjct: 233 PLQNQMKEFKEKIEFLSKDEAEKISALQNELKNLKELSHKLSTDAENLTKALKGESKTQG 292 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGE+VL RVLE SGL EG E+E +VS+ ++ R +PDV+V LP +DV+IDAK +L A Sbjct: 293 NWGELVLERVLELSGLTEGREFEREVSLNDEDNKRYRPDVVVHLPNQRDVIIDAKTSLNA 352 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y+ Y ED ++ ++ HI +++ HI L K Y+ L G+ +LD++ MF+P+E A +L Sbjct: 353 YQEYIKTED----KTYIKAHIQALKKHIDDLADKKYEDLKGVNSLDFIFMFVPIENALML 408 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 AL+ L A K ++LVSPTTLLV+LR I + WR+E Q++N ++ A LYDK+R Sbjct: 409 ALENDSSLFEYAFKKRVVLVSPTTLLVSLRAIESSWRFERQAKNIDEVVKAAESLYDKVR 468 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR-GLGVEIKREINPDLAEQ 442 F +D IG+SL+ AQ ++ A KL++GRGNV+ Q E + G++ K+EI+ DL + Sbjct: 469 GFTEDFEKIGKSLESAQKSFDNAKNKLTTGRGNVIRQVELLKEKAGIKPKKEISKDLIDI 528 Query: 443 AV 444 AV Sbjct: 529 AV 530 >UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ80_9BACT Length = 453 Score = 318 bits (814), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 158/376 (42%), Positives = 245/376 (65%) Query: 68 EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN 127 E+ L+ NT L L R+ + + ++ ++ +++L+ +FE LA R+ + ++ Sbjct: 70 ELVQLRDENTGLNRKLAGADERIHSMETRIAEQKAELAELQKKLTAEFETLATRVLDANS 129 Query: 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + +N++S++ LL+PL E++ FR +V+ + + ++R L +++ L +LN +M+ E Sbjct: 130 EKFAIRNKESIDKLLAPLSEKITDFRSRVETTHDQSVKDRAELVAQLKTLGELNQKMSTE 189 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 A NLT ALKG KTQGNWGE+VL VLE SGL EG EY TQ S ++ R QPDV++ L Sbjct: 190 AHNLTTALKGQTKTQGNWGELVLGTVLEKSGLMEGREYLTQASFVSEDGKRQQPDVLIVL 249 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P+GK +V+DAK++LVAYER N E + RE+AL++HI SV+NH+ L +K Y L +++ Sbjct: 250 PEGKHLVVDAKVSLVAYERCVNEESETKREAALKDHIQSVKNHVAELSKKRYDALYEIQS 309 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 D+VLMF+PVEPAF++A+ L A + N++LV+P+TLL LRT+AN+WR E Q+RN Sbjct: 310 PDFVLMFVPVEPAFIMAIQADDTLFDFAFRQNVVLVTPSTLLATLRTVANIWRQEKQTRN 369 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A IA R+ LYDK F +DM IG+ + ++Q Y AM KLS GRGN++ Q ++ + L Sbjct: 370 ALDIAQRSGALYDKFVGFFEDMKKIGEQIGRSQVAYDSAMNKLSIGRGNLVNQVQSLKEL 429 Query: 428 GVEIKREINPDLAEQA 443 G + K+ + + E A Sbjct: 430 GAKAKKALPAETVEGA 445 >UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRK6_9GAMM Length = 469 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 170/451 (37%), Positives = 281/451 (62%), Gaps = 15/451 (3%) Query: 3 FSIMVYAVIALVGVAIGWL-FASYQHAQQKAEQ--------LA-EREEMVAELSAAKQQI 52 S++V A AL G+ + L F Q Q K E+ LA E E+ + ++Q+ Sbjct: 6 LSLLVGA--ALSGIVVAALVFWGLQARQSKRERDHTETNNALALENRELTTRCESLQEQV 63 Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 + E R E E E++ L L+A T + ++ DDKI+ + +++Q+L Sbjct: 64 KEREQ-RLEKE--RAEIKELAERYQDLQAQYTHTKTTLHEKERQFDDKIKLLEDNKQQLK 120 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 ++F+NLAN+IFE + ++ ++QSL++LL P ++QL F+ +V++ +E ++ +LT Sbjct: 121 QEFQNLANKIFEDKGKAFNDLSQQSLDNLLKPFKQQLTDFKTRVENIHHQETTQQASLTE 180 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 +I++L++LN ++ +EA NLT ALKG+ KTQGNWGE +L +L+ SGL +Y +VS++ Sbjct: 181 QIKSLRELNQKITEEAQNLTTALKGEKKTQGNWGEYILENILDKSGLVRDRDYRREVSLK 240 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 + R +PD +V LPQ K ++IDAK++L A+ RY +E D R AL H+A++++ ++ Sbjct: 241 TEEGQRQRPDAVVYLPQSKHLIIDAKVSLNAWTRYIESETDDERRIALNAHVAAIKDRVK 300 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K+Y L GL + + V MF+P+E AF AL +L AL+NN+++ +PTTLL +L Sbjct: 301 ELSDKNYFDLNGLNSPEVVFMFVPIESAFAAALSHDRDLALNALENNVLIATPTTLLTSL 360 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 ++ LWR+E Q++++ +A+RA K+YDK+R F+D M +G L AQ +Y AM +L+S Sbjct: 361 NIVSQLWRFEDQNKHSALLAERAGKVYDKLRSFVDSMDKLGNQLGSAQKSYDTAMGQLTS 420 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 GRGN++ QA F LGV ++ E+ +L E+A Sbjct: 421 GRGNLIKQASDFEKLGVSVRAELPRELVEKA 451 >UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q21KA3_SACD2 Length = 494 Score = 310 bits (794), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 151/329 (45%), Positives = 227/329 (68%) Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 ++Q L ++FE A ++F+ R + N++ L +LL P REQ+ F ++V+D + KE + Sbjct: 125 TKQALFKEFELAAGKLFDEKKERFESSNKEGLQALLQPFREQITAFNKRVEDVYDKENTQ 184 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 R+ L +I LQ+ Q++ EA NL ALK DNK QG+WGE+VL R+LE SGL++G EY+ Sbjct: 185 RNQLVGQIIELQKQTQQISAEANNLAAALKNDNKIQGSWGEIVLERLLEQSGLQKGREYD 244 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 TQ S + SR +PDVIV LP KD+VID+K++LV YERY +AE+ +E AL+ H+ S Sbjct: 245 TQKSFSSADGSRFRPDVIVHLPDEKDIVIDSKVSLVDYERYCSAENQAEKEIALKAHVDS 304 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VR H++ L K Y+ L G+RTLD+V +F+PVE A+++A+ P L EA NI++VSP+ Sbjct: 305 VRAHVKGLSLKQYENLEGIRTLDFVFVFVPVEAAYIVAIQSSPTLFKEAYDRNIVIVSPS 364 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 +L+VALRT+ +WRYE Q+ NA+QIA A KLYD+ LF+D + +G++LD+ QD + +A Sbjct: 365 SLMVALRTVETIWRYEKQNANAEQIAASAGKLYDQFALFVDSLEEVGKNLDRTQDAFGKA 424 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 K+L+ GRGN+L + + + LG + R + Sbjct: 425 KKRLTEGRGNLLRKIDGLKELGAKTSRRL 453 >UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRC3_WOLSU Length = 445 Score = 308 bits (790), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 150/359 (41%), Positives = 242/359 (67%), Gaps = 4/359 (1%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A + + T ++ ++ +K R + +++RL +F LA + E R+ ++ ++L Sbjct: 86 AQISSLETTLQKEREMLLEKERFLTQTQERLKLEFGELAQKFLEEKGERLGQKQNETLGL 145 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 +L PL EQ+ FR++V+++ KE + R L +EI+NL+ LN ++++EA++L +ALKG++K Sbjct: 146 ILKPLSEQIKTFRQKVEETHAKEMEGRAVLENEIKNLKALNLKISEEALHLAQALKGESK 205 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 TQG+WGE++L ++LE SGL +G EYE Q S +++ ++PDVIV LP+ +DVVID+K + Sbjct: 206 TQGSWGEMILEKILEDSGLSKGREYEVQTSFKSEEGRLLRPDVIVHLPENRDVVIDSKAS 265 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AYER+ +++ + EHI S++NH++ L K Y L R+LD+VLMFIP+E A Sbjct: 266 LTAYERFIHSQQP----QDIAEHIRSIKNHLKELSSKSYDSLLKERSLDFVLMFIPIEGA 321 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 F+ AL P L EA + NI+LVSP+TLLV LRTI ++WRYE QS+NA++IA A +YD Sbjct: 322 FIEALRHDPRLFVEAYEKNIILVSPSTLLVTLRTIHHIWRYERQSQNAEEIAREAGSMYD 381 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 K+ F +D IG+ ++K++ Y +A+ KL G+GN++ +AE R LGV+ K+ ++ L Sbjct: 382 KLVGFTEDFLKIGEQIEKSEKIYSEALAKLKEGKGNLIRRAERLRELGVKSKKSLDSRL 440 >UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6VZC3_MARMS Length = 437 Score = 307 bits (787), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 168/446 (37%), Positives = 258/446 (57%), Gaps = 26/446 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 F I + + G + + +QH Q+K + + EE+ L +K QI + E Sbjct: 15 FCIGAILLSGIAGAIVQAMRRQWQHTQEKMQ--LQNEELKRLLEQSKDQI---HYLEKES 69 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L + + QS+ EA RE + E +F+ +A+ I Sbjct: 70 LTLEQQFAAAQSVWQEKEAFYREQKKQNET---------------------EFKQMAHEI 108 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 ++ ++N + L SLL+PL Q+ F+ V+ S+ +EA+ER +L EI+ LQ LN Sbjct: 109 MSQQGLQLAKENERQLGSLLTPLGSQIQKFQESVEKSYQEEARERFSLVKEIKGLQLLNQ 168 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 +++ +A++LT ALKG NK QG WGEV+L R+LE SGL +G EYETQ S + R+QPD Sbjct: 169 KISDDAVSLTHALKGQNKLQGGWGEVILERILERSGLEKGREYETQASYQTAEGRRLQPD 228 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 V++ LP+GK +++D+KM L++Y Y AE D R AL++H+ +VR H++ L K Y L Sbjct: 229 VVIHLPEGKQIIVDSKMVLISYLAYMEAETDEDRNRALKQHLDAVRRHMKELSAKSYHDL 288 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 PG+ +LD+VL+FIP+E AF LAL L +EA ++NI++V P+ LL LRTI N+WR E Sbjct: 289 PGVTSLDFVLLFIPIEAAFGLALQGDNGLFSEAFEHNIIIVGPSNLLATLRTIQNIWRNE 348 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 QS+NA +IA +A +YDK F+ DM IG L+ + A+KKL++GRGN++A+AE Sbjct: 349 KQSQNAIEIARQAGAMYDKFSGFVQDMDDIGSKLEAVSRTHDSALKKLTAGRGNLVARAE 408 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDE 448 + +G + + + + V DE Sbjct: 409 KLKLMGAKTSKALPVEYLSDDVFTDE 434 >UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETS9_AMOA5 Length = 427 Score = 304 bits (778), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 166/430 (38%), Positives = 265/430 (61%), Gaps = 29/430 (6%) Query: 20 W-LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL----LNNEVRSLQS 74 W + +SY Q K+ Q +LS +QQ+ +++ ++ + L+ ++ L++ Sbjct: 18 WHITSSYLKVQTKSLQ--------TQLSGTQQQLEETKLVLSQAQAQELQLSTQLAKLET 69 Query: 75 INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQN 134 IN +L L E Q+ +K+ E++LS QF+NLAN + E +++ QN Sbjct: 70 INNNLATQLTE--------QKQEVNKM------EEKLSIQFKNLANELLEEKSKKFTAQN 115 Query: 135 RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT-LTHEIRNLQQLNAQMAQEAINLTR 193 +++L +LL PL E++ F +QV+ + KE ER+ L EI L LN Q+ +EA NL + Sbjct: 116 KENLEALLKPLGERIQAFEKQVEQT-NKEDLERNVALRTEITRLYTLNMQITKEAENLAK 174 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 A+KGD KTQGNWGE +L +LE SGL + EY Q S + R QPDV+++LP K + Sbjct: 175 AIKGDTKTQGNWGEFILESILEKSGLIKDREYVIQASFVTEEGKRYQPDVVIKLPTEKHL 234 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 ++DAK++L+ YE++FN E + + L++H++SVR HI L K+YQ L+ LD+V+M Sbjct: 235 IVDAKVSLINYEQFFNTEQEEEKVQQLKKHLSSVRRHISSLSEKNYQAEYSLQGLDFVIM 294 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 FIP+EPAF L + + +EA + NI++VSP+TL+ LRTI+N+W+ E+Q++NA +IA Sbjct: 295 FIPIEPAFSLVVQHDHAIFSEAYEKNIIIVSPSTLIATLRTISNIWKQEYQNQNALEIAQ 354 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 ++ LYDK FI+D+ IG+ LD Q +Y +AMKKL G+GN++ + E + LG + Sbjct: 355 QSGALYDKFVGFIEDLKQIGRQLDITQKSYVEAMKKLYDGKGNLVTRVEKIKSLGARATK 414 Query: 434 EINPDLAEQA 443 I+ L ++A Sbjct: 415 AIDQQLLDRA 424 >UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F138_9PROT Length = 483 Score = 300 bits (769), Expect = 7e-80, Method: Compositional matrix adjust. Identities = 147/373 (39%), Positives = 236/373 (63%) Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 N+ EA + E+ + ++ A +K+ + ++ +L +F+ LAN+IFE + EQNR Sbjct: 103 NSRQEAHIAELNIAITKDREAAAEKLALLEEAKTKLGHEFKLLANQIFEERGKTFSEQNR 162 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 S++ +L P+REQ+ FR++V + +A++R +L + L++LN QM+++AI LT AL Sbjct: 163 SSIDEVLKPMREQMGEFRKRVDEVHLNDAKDRASLREHLNQLEKLNRQMSEDAIGLTHAL 222 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KG +K QGNWGE++L R+LE SGLREG E+ + S + R++PDV+V +P K V+I Sbjct: 223 KGQSKAQGNWGEMILERILETSGLREGKEFAREQSFTGEDGRRLRPDVVVYMPGDKQVII 282 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D+K++L YER +AEDD R+ AL H+ S+++HI+ L K+Y LP + T DYVLMF+ Sbjct: 283 DSKVSLTDYERAVSAEDDDKRKLALTAHVRSLKSHIQGLSSKNYNHLPNVHTPDYVLMFV 342 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 P+E A+L+A++ P + A + + +V+P+TL L+ I LWRYE QS N ++ DRA Sbjct: 343 PIEGAYLMAIEADPGVFEAAFEQRVAVVTPSTLYATLKLIEQLWRYERQSENVVKLVDRA 402 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 KL+DKM FI+ IG L++A+ Y ++ ++ +G GNV+ Q L + ++E+ Sbjct: 403 GKLHDKMVSFIESFEEIGARLEQARSAYDTSLNRIRTGPGNVINQIATLGKLAGKTRKEL 462 Query: 436 NPDLAEQAVSQDE 448 L E A D+ Sbjct: 463 PKHLTESAALSDQ 475 >UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BID3_9PROT Length = 359 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 137/290 (47%), Positives = 213/290 (73%) Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 + +K+ M N+++ LS++F+ LAN+IFE +++ + +++ LL P REQ+ F Q Sbjct: 50 SKEKLEIMQNAKEELSKEFKLLANQIFEDKSKKFNHTHKEQFEMLLRPFREQITNFSTQS 109 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 ++ F EA+ERH L E+ L+++NAQ++QEA+NLT ALKG+NKTQGNWGE+VL R+LE Sbjct: 110 REQFSYEAKERHLLKDELVRLKEMNAQLSQEALNLTNALKGENKTQGNWGEIVLERILEE 169 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR 276 SGLREG EY+TQ ++++ +PDVI+ +PQ +D++ID+K++LVAYER+ + E+ + Sbjct: 170 SGLREGMEYKTQATLKSGDGKIYRPDVIIHMPQDRDIIIDSKVSLVAYERFMSQENPDAK 229 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 AL+EHI+S+ HI+ L K+Y++L G+ TLD+VL+F+P+E AFLLAL+ E A Sbjct: 230 ALALKEHISSIAGHIKDLSSKEYERLEGVNTLDFVLLFMPIEGAFLLALEADGEFFKRAY 289 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 +NI++VSP+TLLV LRTI ++WR + Q +A++IA+ A +YDK+ LF+ Sbjct: 290 DSNILVVSPSTLLVTLRTIEHIWRTQRQEEHAKKIANEAEAMYDKLVLFV 339 >UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobacteriales RepID=A3UAT4_9FLAO Length = 470 Score = 299 bits (766), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 165/458 (36%), Positives = 279/458 (60%), Gaps = 26/458 (5%) Query: 1 MDFSIMVYAVIALV----GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSE 56 MD + V+ ++ L+ G +G LFA ++ +E SA +++I Q+E Sbjct: 30 MDQNFFVFLLVGLISALSGAYLGNLFARLKNK--------------SETSALQERINQTE 75 Query: 57 HW--RAECELLNNEV--RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 H R E L EV ++++S L A ++ + +A ++ ++ +M +++ + Sbjct: 76 HQLERVEESLGRTEVEKQTIRSEKEQLNATMQVMKVEYDALERKTKEQKGEMEQLQEKFT 135 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT-LT 171 ++FENLAN+I + + + EQN+ +++ +L PL+E+++ F ++V+DS KE RH+ L Sbjct: 136 KEFENLANKILDEKSTKFTEQNKTNIDIILKPLQEKIEKFEKRVEDS-NKEQYGRHSELK 194 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 +I+ L +LN QM+++A NLT+ALKGD+K QGNWGE++LTR+LE SGL + EY Q S Sbjct: 195 EQIKGLSELNQQMSKDADNLTKALKGDSKIQGNWGELILTRILEKSGLEKDREYTVQDSH 254 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 +N R+Q DV++ LP GK ++ID+K++L +ER+ ++ED+ + L+ HIAS++ H+ Sbjct: 255 DNPEGRRLQTDVLIHLPDGKKMIIDSKVSLTDFERFVSSEDEDDKRRHLKSHIASIKRHV 314 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K+YQ L + D + MFIP+EPAF +A +P L A +++V+P+TLL A Sbjct: 315 EQLSAKNYQYLID-ESPDTIFMFIPIEPAFAIASANEPNLYEIAFDKQVIIVTPSTLLAA 373 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LR + NLW+ + Q +NA +IA +A LYD D++ +G+ + Q++Y AMKKL Sbjct: 374 LRLVDNLWQNDRQKQNAIEIATQAGALYDSFTNLTDELIKVGKQIGTVQNSYEGAMKKL- 432 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +GRGN++ + E + LG + + I+ L +A DE+ Sbjct: 433 TGRGNLIKRVEKLKKLGAKASKAIDAKLLSRAEDSDED 470 >UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9B0_9GAMM Length = 472 Score = 298 bits (763), Expect = 3e-79, Method: Compositional matrix adjust. Identities = 160/455 (35%), Positives = 273/455 (60%), Gaps = 15/455 (3%) Query: 6 MVYAVIA--LVGVAIGWLFAS-----------YQHAQQKAEQLAEREEMVAELSAAKQQI 52 V+ +++ LV IG LF S Q A + L+ R + AE + + Q+ Sbjct: 12 FVFGLLSTVLVSTVIGTLFWSRWRRQQLLLEEMQQALHQERSLSAR--LAAENAGLQVQV 69 Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 Q +A+ + ++ LQ +LE+ L ++ R E+A+ H ++++ + +S ++L Sbjct: 70 RQLTELQAQLTAKDQQLNLLQREVRTLESRLADINARAESAKAHHAEQLQLLNDSREQLK 129 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 F LAN IFE +R EQ++ S+ +LL P Q++ FR++V D ++ + R L Sbjct: 130 RDFGQLANDIFEQKQQRFSEQSKASITALLDPFHRQIEQFRQRVDDIHSRDVEGRSQLLT 189 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 ++ L+ +N+Q+ ++A +LT+ALKGD K QGNWGE+ + R+LE+SGL++G E+E + + + Sbjct: 190 QLSVLKDMNSQLNRQADDLTKALKGDKKLQGNWGELQIERILESSGLQKGREFEREANYK 249 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 +D +PD I+ LP GK ++ID+K++L AY++ A+D+ TR +ALQ H+++VR+HI Sbjct: 250 DDQGQNRRPDFIIHLPDGKHIIIDSKVSLNAYQKAVAADDEATRNTALQAHVSAVRHHIH 309 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K+Y L GL + D+VLMF+PVE AF+ A ++ +L EA + +I++V+PTTLL L Sbjct: 310 ALSAKNYPGLSGLNSPDFVLMFMPVESAFIAAFEQDSQLFNEAFERHIVVVTPTTLLATL 369 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 RT+ANLW E Q+ NA+++ A K+YDK+ +F M +G + A + +A+ S Sbjct: 370 RTVANLWVLERQNENAKELYALAGKIYDKVAVFSRKMDKLGTQIQSADRTFHEALNTFSD 429 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 GRG++L+ E + +G + I+ + V +D Sbjct: 430 GRGSMLSYVERLKEMGAPTSKSISDTHRPRMVGED 464 >UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDJ6_9SPHI Length = 435 Score = 296 bits (759), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 140/337 (41%), Positives = 224/337 (66%) Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 +QR +FEN+AN++ E + EQNR +++++L PL+E + F +V+ + E+ ER Sbjct: 96 QQRFKVEFENIANKVLEEKTAKFTEQNRSNMDTILHPLKENIRAFEEKVEKVYKAESDER 155 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 + L I L + Q+ +EA NL+RALKGD K QGNWGEV+L RVLE SGL + EY Sbjct: 156 NVLKGVITQLMTQSKQIQEEANNLSRALKGDTKKQGNWGEVILERVLERSGLVKDREYRI 215 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q S+ +RMQPDVI+ LP K +++DAK++LVAYER+ NA D RE+ +++H+ S+ Sbjct: 216 QTSLTASGGTRMQPDVIIDLPDDKHLIVDAKVSLVAYERFVNAATDEERETHVKQHLLSI 275 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + HI+ L K+YQ+L + + D+VL+FIP+E +F +A+ + EL A + +++VSP+T Sbjct: 276 KTHIQGLSGKNYQELYQINSPDFVLLFIPIESSFGIAVQQDAELFNYAWERKVVMVSPST 335 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 LL LRTI++LW+ E Q+RN +IA + +YDK F+ DM +IG+++ ++QD Y +A+ Sbjct: 336 LLATLRTISSLWKQERQNRNVLEIARLSGSMYDKFVGFLQDMESIGRNIRQSQDAYDKAL 395 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 KLS+G GN+ + +E + LG + ++I+ + + Sbjct: 396 NKLSTGAGNLSSTSEKIKKLGAKATKQIDTRFLDSGI 432 >UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaproteobacteria RepID=Q3ICM4_PSEHT Length = 488 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 146/396 (36%), Positives = 258/396 (65%), Gaps = 7/396 (1%) Query: 49 KQQITQSEHW-RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 KQ ++ W +AE EL +L+ + + +L + T +E QQH +++ Q+ S Sbjct: 94 KQSQQYNQFWQKAEAEL-----SALRKQYSQCDVELNNIRTTLEQKQQHFSEQLAQIEQS 148 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 ++ L ++FENLAN+I E +++ N++S+ LL P++ +L GFR +++ ++ ++R Sbjct: 149 KEMLKKEFENLANQILEEKSQKFKVLNQESIEQLLKPVQGELKGFRDKMESIHVEDLKQR 208 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L E+ +LQ + + ++A L+ AL+G KTQGNWGE++L VL+++GLR G +Y+ Sbjct: 209 AALKTELLHLQAKSQAITEQADRLSNALQGQKKTQGNWGELMLENVLDSAGLRAGVDYKR 268 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 +VS N R++PDV+V LPQG+ +VIDAK +L AY RY NA+++ + A++EH+ +V Sbjct: 269 EVSF-NTEDGRLRPDVVVYLPQGRHLVIDAKTSLNAYTRYVNADNELEAQQAIKEHVEAV 327 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + I L K Y +LPGL + + V+MF+P+E AF+ AL Q ++ +A++ NI++ +PTT Sbjct: 328 KARINELASKSYDRLPGLNSPEVVVMFVPIESAFVEALKYQSDIYQQAIEKNILVATPTT 387 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 LL +L + LWR+E Q++ ++++A RA + Y+K+ F+ M +G+ LD+A+++Y +A Sbjct: 388 LLTSLNIVKQLWRFEEQTKYSKELAARAERFYNKLNGFLTSMEGVGKQLDRAKESYDKAF 447 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 +L G+GN++ QA F+ LGV +++E+ + E+A Sbjct: 448 SQLYRGKGNLIKQASEFKELGVSVQKELPAESVERA 483 >UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7P6_ACIC5 Length = 505 Score = 294 bits (753), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 171/479 (35%), Positives = 284/479 (59%), Gaps = 39/479 (8%) Query: 1 MDFSIMVYAVIAL-VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 M +V+ V AL G+A+G F S A +E+ AE+ + A L AA+ Q+ + Sbjct: 1 MPLVAIVFVVAALGAGIAVGAWFGSRLAA---SERRAEKAQSEAALQAAQAQLDPARQQA 57 Query: 60 AECELLNNEVRS------------------LQSINTSLE-----------------ADLR 84 AE LL E+R+ L + +L+ A++ Sbjct: 58 AELALLTEELRAQVAEARDKAARAETEAARLPDLRAALDASEEDKARLRQELSAAQAEMA 117 Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 + T++ + +A +K++ ++ + + L+ QF+ LA I E ++ EQN+ +L LL+P Sbjct: 118 RLGTQLRNERDNAQEKLQMLMGAREELTNQFKTLAQSILEEKSKVFTEQNQANLGQLLTP 177 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 +RE+ F+++V + + + L +I+ L LN Q+++EA +L ALKG +KTQG+ Sbjct: 178 IREKFTEFQQKVTELRDQGIKSSAELGQQIKGLSDLNQQLSKEANSLVEALKGSSKTQGD 237 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE +L ++LE++GL++ +Y Q S + +R QPDVIV LP+GK +++D+K++L Y Sbjct: 238 WGEFILEQILESAGLQKDRQYRVQESFTREDGTRAQPDVIVSLPEGKHLIVDSKVSLRDY 297 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 Y AE+D E++L H+A++ HI+ L R++Y L GLR++D+V+MF+P+EPA++LA Sbjct: 298 SDYCAAEEDAAHEASLARHLAAIHAHIKELSRRNYHTLYGLRSIDFVVMFVPIEPAYMLA 357 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 L L +A + N++LV P+TLL +RT+A LWR E Q+RN Q+I R +LYDK+ Sbjct: 358 LAHDSSLWQKAWEQNVLLVGPSTLLFVVRTVAQLWRQEDQTRNVQEIVRRGGELYDKLSA 417 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F D++ +G++LD A+ +Y +A KKL+ GRGN + QAE R LGV+ +++ +L E A Sbjct: 418 FAKDLTDVGKNLDAARASYDEAYKKLAQGRGNAIRQAELLRQLGVKATKKLPGELVEMA 476 >UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK3_MARMM Length = 527 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 156/401 (38%), Positives = 246/401 (61%), Gaps = 10/401 (2%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD 98 E +EL+ A++ + + + E + L + ++ L A + T +AA +H D Sbjct: 94 ESAASELATAREALARLDGVVEERDRLRVSLEAVTVERNGLNASHEALKTEHDAALRHHD 153 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 +K+ ++ + +RL++QF+ A I + S +++Q+ +SL +LL PLREQL FR +V+ Sbjct: 154 EKLAELEKARERLNDQFKLTAAEILKASGAELNKQSTESLQTLLKPLREQLTDFRSKVE- 212 Query: 159 SFGKEAQERHTLTHEIRNLQQL----NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 K+A++RH EI+ L + ++M+ +A L AL+ +K QG+WGE+VL +L Sbjct: 213 ---KDAEQRHGHAGEIKQLMETVRKDASRMSDDAQKLANALRSSSKVQGDWGEMVLASIL 269 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 E +GL E + TQ + N + ++PDVIV +P G +VID+K++LVA+ER NAEDD Sbjct: 270 ERAGLLENEHFHTQSTERNAEGALLRPDVIVDMPGGHRLVIDSKVSLVAFERCVNAEDDE 329 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 R +AL++HIASVR HI+ LG KDY +L +++ LMFIP+E A LAL PEL Sbjct: 330 IRTAALKQHIASVRAHIKALGEKDYAKL--YEGVNFTLMFIPLEGAASLALQNDPELSAY 387 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A N+M+ +PTTL++A+RT+ NLW + Q+R+A IADRA LYDK F+ D+ +G+ Sbjct: 388 AWDRNVMIATPTTLMMAMRTVGNLWTIDRQNRHAIDIADRAGALYDKFEGFVGDLETVGK 447 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 +D A+D + A KL GRGN++ Q E + LG ++ + Sbjct: 448 RIDGAKDAWAAAKGKLVEGRGNLVRQTEMLKSLGANARKSL 488 >UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q883E2_PSESM Length = 639 Score = 289 bits (739), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 140/367 (38%), Positives = 227/367 (61%), Gaps = 4/367 (1%) Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 L EV R Q A +K++ + +++ +L ++F+NLAN+IF+ + EQ+RQ L++LL Sbjct: 261 LAEVNMRHARDQHSAAEKLQLLEDNKVQLKQEFQNLANQIFDSKQQSFSEQSRQGLDTLL 320 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P ++QLD FR++V Q + ++ +E+ L +LNAQ+ EA NLT+ALKGD K Q Sbjct: 321 KPFKDQLDSFRQRVDQVHSDTVQGQSSMKNELVKLMELNAQITTEASNLTKALKGDKKLQ 380 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE + +LE +GLR+G+EY + + +ND +PD +V LP+GK ++ID+KM+LV Sbjct: 381 GTWGEQKVEMLLEQAGLRKGFEYHREANFKNDEAGNNRPDFVVNLPEGKHIIIDSKMSLV 440 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY Y +AE D R AL H+ +++NHI L K Y L G+ + D+V +F+PVEPA+L Sbjct: 441 AYTEYVSAETDEERTRALSAHVLALKNHINGLSDKKYTDLNGINSSDFVFLFMPVEPAYL 500 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 +A + P + A + I +++ TTLL LR ++NLW + Q+ + Q+A A+K+YDK+ Sbjct: 501 VAAEHSPGVFQAAYEKRIAIITATTLLPVLRVVSNLWSIQRQNSSTLQLATMATKVYDKL 560 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 R+F++ M +G + Q +Y +++ L G++ + F LGV + + L Sbjct: 561 RVFVEKMDKLGNQIATVQKSYNESITTLKGDHGSLTKTVDKFVALGVTVSKR----LPAS 616 Query: 443 AVSQDEE 449 A+ +DEE Sbjct: 617 AIGEDEE 623 >UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingobacteriaceae RepID=C5PMI0_9SPHI Length = 442 Score = 288 bits (738), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 155/434 (35%), Positives = 267/434 (61%), Gaps = 6/434 (1%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKA--EQL-AEREEMVAELSAAKQQITQSEHWRAEC 62 M+ +IAL+ + + LF + K EQL +++EM EL+ ++Q+ E+ E Sbjct: 4 MLVTIIALLAIVLVVLFLKRKEGSGKEDYEQLRHQKDEMALELARSQQR---EENLIGER 60 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L E+ +S + L ++A Q+ + + +++ ++++ + +F+++AN+I Sbjct: 61 ADLKEELEKERSERLKSDRALETAHAYLQAQQEKLEGQKKEIEETKKQFNLEFQHIANQI 120 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 E ++ E N S+ LL PL+E++ F +V+ ++ E+ ER+ L + L Q + Sbjct: 121 LEEKTKKFTETNHNSITLLLDPLKEKIKTFEEKVEKTYQHESAERNVLKGVVEQLMQQSM 180 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 Q+ EA NLTRALKGD+K QGNWGEV+L RVLE SGL + E+ Q S+ ++ R+QPD Sbjct: 181 QIRNEANNLTRALKGDSKKQGNWGEVILERVLERSGLLKDQEFRLQASVTDEDGKRLQPD 240 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 I+ LP K +++DAK++LVAYE++ NAE + ++ ++HI SV NH+R L K+Y +L Sbjct: 241 AIIDLPDDKHLIVDAKISLVAYEKWVNAESEEEQKIFARQHIQSVENHVRELSAKNYHEL 300 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 +++ D+VL+F+P+E A +++ +P+L ++A +++VSP+TLL LRTIA++W+ E Sbjct: 301 YRIQSPDFVLLFMPIESALSMSVREKPDLFSDAWDRKVVIVSPSTLLATLRTIASMWKQE 360 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q+RN +IA A LYDK F+ DM + L +A + +++A KKL +G GN++ + E Sbjct: 361 RQTRNVLEIAREAGALYDKFVGFLQDMQQVEGQLQRAMERHQEATKKLGTGAGNIIRRVE 420 Query: 423 AFRGLGVEIKREIN 436 R LG + ++I+ Sbjct: 421 NLRELGAKANKQID 434 >UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorobiaceae RepID=A1BFC3_CHLPD Length = 437 Score = 283 bits (723), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 147/370 (39%), Positives = 233/370 (62%), Gaps = 7/370 (1%) Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 E+ L+ I LE+DL + + +A +KI + SE RL +FE+LA RI E Sbjct: 55 TGELDILKVIRARLESDL-------DHERSNALEKIALLQQSELRLKTEFEHLAGRILEE 107 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + E+NR + SLL PL+EQLD FR +V + + + L ++R LQ+L+ Q++ Sbjct: 108 RGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVHRNDTEISARLIEQVRQLQELSGQVS 167 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 +EA L RA+KG++K QG+WGE+++ R+ EASGL +G EY Q S + + +PD +V Sbjct: 168 REANLLARAIKGESKAQGDWGELIIERIFEASGLEKGREYTVQESFRMEDGTLKRPDFMV 227 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 LP K V++D+K++L AYERY + +D RE AL+EH+ SVR HI L K+Y + G Sbjct: 228 LLPGEKAVIVDSKVSLTAYERYCSLDDVARREQALREHVQSVRRHIAGLQEKEYSFIKGN 287 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 RTLD+V+M IPVEPA+ + PE++ E + N++L PTTL++ L+ IA LWR E ++ Sbjct: 288 RTLDFVIMCIPVEPAWQALMQADPEIVYELGRKNVVLTGPTTLMITLKLIAQLWRREKEN 347 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 RNA+ IA++A ++YD++ L ++ M + L ++ AMK+L+ GRG++ ++ E R Sbjct: 348 RNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVSQSFDLAMKRLTEGRGSLASKVEEIR 407 Query: 426 GLGVEIKREI 435 LG ++ +++ Sbjct: 408 RLGAKVSKQL 417 >UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HY1_THICR Length = 480 Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 159/469 (33%), Positives = 281/469 (59%), Gaps = 27/469 (5%) Query: 1 MDF-----SIMVYAVIALVGVAIGWLFASYQ---HAQQKAEQLA-----------EREEM 41 MDF S + + V+AL+G +I W+ Q A +K LA E + + Sbjct: 1 MDFIQLLSSPLTWLVMALIG-SIVWVVQLKQALSSANEKLPGLAAIEADNQFLKEENDRL 59 Query: 42 VAELS-------AAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 +E+S + Q+ Q E RA + + LQ+ ++ +A+L + +R+E + Sbjct: 60 KSEISDFQVMKGESNQRAEQLEQLRALQKEQQVTFQQLQTRHSETQAELASLKSRLETER 119 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 + +K+ + +++Q L+++F+ L+N I E +++ +Q++++++ L+ P++ L+ F++ Sbjct: 120 ESNAEKLALLDSAKQTLTQEFKVLSNEILEQKQQQMGQQSKETISGLVQPIQTSLEQFKQ 179 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 +++ ++ + R +LT ++++L++LN M+ EA NLT+ALKGD K QGNWGE +L ++L Sbjct: 180 RIEAVHKEDLEGRASLTEQLKHLKELNQTMSLEAQNLTKALKGDQKIQGNWGEFILRKLL 239 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 E++GLREG E+ET+ S + R++PDVI+ LP K V+ID+K++LV+YE N+E + Sbjct: 240 ESTGLREGIEFETEKSFNQEGGKRLRPDVIINLPDSKHVIIDSKVSLVSYEAALNSETEN 299 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 + ++ H+ S+ HI+ L K Y L L D+VLMFIP+E A+L+A+++ + Sbjct: 300 EKAQHIKNHLQSISKHIQALSDKRYDHLELLNAPDFVLMFIPIEGAYLMAIEQNSAIFEN 359 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A + +V+PTTL L+TI LWRYE QS + ++ RA++++DK FID IG+ Sbjct: 360 AFDKKVAVVTPTTLFTTLKTIEQLWRYERQSEHTVKLIKRAAEVHDKFVGFIDTFEKIGK 419 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 L AQ ++ QA K++ G GN++ QAE + L + K+EI L ++A Sbjct: 420 QLGTAQGSFEQARKQMLQGNGNLVRQAEMLKELAGKTKKEIPQHLLDEA 468 >UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=Pasteurellaceae RepID=RMUC_PASMU Length = 509 Score = 279 bits (714), Expect = 2e-73, Method: Compositional matrix adjust. Identities = 147/392 (37%), Positives = 238/392 (60%), Gaps = 2/392 (0%) Query: 54 QSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSE 113 Q EH +A E + L + T+L +L E+ T + ++H ++ + + S+Q+LS Sbjct: 95 QLEHSQANFTRKEQENQELMAKLTTLSQELTELKTTLSEKEKHFAEQQQHIEQSKQQLST 154 Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 +F+NLANRI + +R + N+ +L+SLL P REQ++GF+++V + + + L E Sbjct: 155 EFQNLANRILDEKSRSFSQSNQTALDSLLKPFREQIEGFQKRVNEIHSESVKGNAGLEAE 214 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 I+ + ++ M+Q+A NLT ALKG+ KT GNWGEV L R L+ +GL EG Y Q +++ Sbjct: 215 IKKVLEIGLNMSQQADNLTSALKGEKKTLGNWGEVQLERALQLAGLLEGEHYSAQAHLKD 274 Query: 234 DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRL 293 PD ++ LP K ++ID+KM+LVAYE NAEDD R++ L+EHI +++NHI Sbjct: 275 GEGKHNYPDFVLNLPDNKHLIIDSKMSLVAYESAVNAEDDLKRQNKLREHIKAIKNHIDD 334 Query: 294 LGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALR 353 L RKDY L G+R+ ++VLMFI VEPA++ A+ P L + N++LVS TTL+ LR Sbjct: 335 LSRKDYSNLIGMRSPNFVLMFIAVEPAYIEAMKMDPTLFNYGYEKNVILVSHTTLMPILR 394 Query: 354 TIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 T+ANLWR E + A++I+ RA +Y+++ + + + +G +L A +Y + L Sbjct: 395 TVANLWRIERGNAEAKEISARAGDIYNQICVIAERLGKLGNTLSSASSHYNSTVTALVGQ 454 Query: 414 RGNVLAQAEAFRGLGVEIKREI-NPDLAEQAV 444 +G ++ + E F+ L + + + N +L AV Sbjct: 455 QG-LVGKVERFKDLSAKANKTMPNVELLHHAV 485 >UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWK3_9BACT Length = 436 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 154/422 (36%), Positives = 244/422 (57%), Gaps = 24/422 (5%) Query: 28 AQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVT 87 A +A +LAE V+E +A +I E+R+L +T +A Sbjct: 39 AADEARRLAEESRRVSEEKSAAAEI---------------EIRTLVERSTLAQA------ 77 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 R+EAA+Q + + E+ QF+NLAN I +R E NR++L+ LL P R+ Sbjct: 78 -RLEAAEQRMAEARAEREKMEETFRTQFKNLANDILGEQSRTFKETNREALDVLLKPFRD 136 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 + FR +V+ + E ++R L +E+ L +LN ++ E NLT ALKG++K QG+WGE Sbjct: 137 NIVEFRERVEKIYSSENEQRGALRNELERLMELNRRITTETTNLTNALKGNSKVQGDWGE 196 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 ++L +L+ S L G Y+TQ++I+++A + ++PDV++ LP+GK +VID+K++L A+ Y Sbjct: 197 MILETILDNSNLIRGVHYDTQLNIKDEAGNNLRPDVVLYLPEGKRIVIDSKVSLTAFVGY 256 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 AED+ TR L H+ASVR H+ LGRK+YQ+L L + D+V+MFIP EPAFL AL Sbjct: 257 VGAEDEATRRQYLASHVASVRQHVVELGRKEYQRL--LDSPDFVIMFIPNEPAFLAALQN 314 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 + +A +++ SPT L L+ + +LW+ Q++N I +KLY+++ F Sbjct: 315 DSSIWADAYDKKVIISSPTNLFALLKLVDDLWKRNAQNKNTADIVTYGTKLYEQLVAFTA 374 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + +GQSLD A+D Y A K+L +G N++ E R LG+ K++ + + A D Sbjct: 375 SLEGVGQSLDAARDKYNDAYKRLCTGNDNIVRCGERLRKLGIPTKKQQSARTLQAADLPD 434 Query: 448 EE 449 EE Sbjct: 435 EE 436 >UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQC9_BDEBA Length = 412 Score = 275 bits (704), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 150/381 (39%), Positives = 232/381 (60%), Gaps = 14/381 (3%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINS-------EQRLSEQFENLANRIFEHS 126 S + LEADL + + Q ++ M+++ QR++ QFE +A +IFE Sbjct: 35 SEKSQLEADLSTAQMKNDLLSQSLSEQKTLMVDARKQQEELSQRMNTQFEVMAQKIFEEK 94 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 + + +QN +++ S+L PL+E++ F ++V++++ E ER L E+ L +LN M+ Sbjct: 95 SAKFTDQNHKNIASVLEPLKERIKDFEKKVEETYSTERSERGVLRGELTKLMELNKVMSA 154 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR----MQPD 242 E NLT+ALKG+ KTQGNWGE++L +LE SGLR+G EY Q + D R ++PD Sbjct: 155 ETQNLTKALKGEVKTQGNWGELILENILERSGLRKGEEYVIQ-GTDMDLRGEDGQILRPD 213 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 VIV LP K +++D+KMTL+AYE+Y +AE +E + HI S++ HI L K Y Sbjct: 214 VIVNLPDEKHLIVDSKMTLIAYEQYSSAETAEEQERLGKLHIDSLKKHIDGLSEKKYHAA 273 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 L + D+V++F+P+EPAF LA +PE+ A + N+ +VSPTTLL LRT+A LW+ + Sbjct: 274 DKLISPDFVILFMPLEPAFALAFKLKPEIFQYAWERNVAIVSPTTLLATLRTVAALWKQD 333 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q +NA +IA R LY+K + D+ +G+ L AQ + +KK+S GRGN++ Q E Sbjct: 334 RQEKNALEIAKRGGLLYEKFAGLLKDLQHLGEKLGAAQKAHEDVIKKVSEGRGNLIDQVE 393 Query: 423 AFRGLGVEIKREINPDLAEQA 443 + LG + ++ + P L EQA Sbjct: 394 DLKRLGAKTEKSL-PQL-EQA 412 >UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X215_FLAB3 Length = 501 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 154/421 (36%), Positives = 253/421 (60%), Gaps = 25/421 (5%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 AKQ + Q + R+E E + L +IN SL+ L+ +E Q+ A + Sbjct: 106 AKQSL-QIDGIRSEKEEIFGRNAELAAINESLQQSLKNQKEEIEKIQETAKN-------- 156 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 +F+NLAN I E +++ + N+++L+ LL PL E L+ F+++V + + EA+ER Sbjct: 157 ------EFKNLANEILEEKSKKFTDANKENLDILLKPLGENLETFKKRVNEVYDNEARER 210 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 +L + I+ + + +++QEA NL ALKG KTQGNWGE++L R+LE SGL + EY + Sbjct: 211 FSLNNTIKLMMEQTTKVSQEANNLATALKGQTKTQGNWGEMILERILEDSGLCKDREYFS 270 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q +I+ + +PD +++LP + V+ID+K++L AYER +AE + R+ L HIA++ Sbjct: 271 QYNIKTETGENQRPDFVLKLPGNQIVIIDSKVSLNAYERMCSAETEDERKQNLSLHIAAI 330 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + HI L K Y L LD+ +MFIPVEPAFL A+ +L A +I+L+SPT Sbjct: 331 KKHIDTLALKRYDNLK--EALDFTIMFIPVEPAFLTAVQYDQQLWNYAYHKHIILLSPTN 388 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ L+ I+++W+ Q++NA++IA +A+ LYDK F+ D+ +G+ ++ A+ +Y AM Sbjct: 389 LIAYLKLISDVWKRADQNQNAEEIARQAAALYDKFEGFVSDLLNVGKKMEGAKQDYESAM 448 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRD 467 KKLS+G GN++ E R LGV+ K+++ L E+A ++ ++ NDE+ + Sbjct: 449 KKLSTGNGNLVKATEKLRQLGVKPKKQLPNQLLERANVEEIDF--------ANDESVTEN 500 Query: 468 D 468 D Sbjct: 501 D 501 >UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasmataceae RepID=Q5HB78_EHRRW Length = 436 Score = 274 bits (700), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 129/323 (39%), Positives = 216/323 (66%), Gaps = 3/323 (0%) Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 FENLANRIFE + ++ ++++L+++L+PL+E ++ F+++V+DSF QE+ L EI Sbjct: 106 FENLANRIFEEKTDKFNKISQENLSNILNPLQEHINLFKKKVEDSFNIHNQEQFLLKKEI 165 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY---ETQVSI 231 + + N ++ +A NL LKGD K QGNWGE++L ++LE SGLR+ +Y T +++ Sbjct: 166 QRIVLANEKITLQAENLANVLKGDIKIQGNWGEMILEKILENSGLRKNQDYVLHATGLNL 225 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 +++ ++ QPD I+ LP+ K ++ID+K++L+ YE+YF + + ++ + L++ IAS+R+H+ Sbjct: 226 KDNEGNKQQPDAIINLPENKHLIIDSKVSLIHYEKYFVTKSEESKNNLLKQFIASIRSHV 285 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 +L K YQ + L+T D+VLMFIP+E A+ LA+ L A I++V P+TLL Sbjct: 286 NVLSCKKYQDIEKLKTPDFVLMFIPIEGAYSLAMQEDLMLHNYAWNKKIVIVCPSTLLAT 345 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L+TI +LW+ E+Q+RN +IA + LYDK+ FI DM +G+ + + Y AMKKLS Sbjct: 346 LKTIESLWKLEYQNRNTMEIARQGGALYDKIIGFISDMQKLGKQMGILHNVYNDAMKKLS 405 Query: 412 SGRGNVLAQAEAFRGLGVEIKRE 434 G GN+L++ E + LG++ ++ Sbjct: 406 EGHGNILSRTENLKLLGIKTSKK 428 >UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=C6V407_NEORI Length = 408 Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 132/332 (39%), Positives = 214/332 (64%), Gaps = 8/332 (2%) Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 S++ + +FE LA++I E S R+ EQ+ + LL PL+ ++ F +++++SF + +E Sbjct: 78 SQRAMYAEFETLASKILEGSAVRLKEQSINDIGGLLEPLKLKITEFEKRIEESFHADIKE 137 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 R++L EI + +M +EA L R+L+GD+KTQG+WGE+VL+++LE SGL++G +Y Sbjct: 138 RYSLAKEIARMASQTDRMIEEANKLGRSLRGDSKTQGSWGELVLSKILECSGLQKGRDYM 197 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q +END PDVI+ LP GK +V+DAK L Y+ Y N + + L+ + S Sbjct: 198 LQQKLENDT----IPDVIINLPDGKHLVVDAKTPLKHYDLYINTHE----KGHLENFLKS 249 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VRNH++ L K+Y L T +V MF+PVE A+ LAL EL AL++ +M+VSP Sbjct: 250 VRNHVKNLSGKEYHSAQELFTPGFVFMFVPVESAYALALSTDLELKELALRSRVMIVSPN 309 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 +L+ L+ ++++W+ Q++NA +IA +A +YDK LF+D+++ IG S+ + YR A Sbjct: 310 SLVAMLQAVSSVWKIVDQNKNANEIAKKAGAMYDKFVLFVDELAKIGHSIANSDRLYRSA 369 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 M KL GRG++L++AE +G+G++ +EIN D Sbjct: 370 MNKLRDGRGSLLSRAEDLKGMGIQANKEINED 401 >UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT8_UNCTG Length = 509 Score = 267 bits (683), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 133/340 (39%), Positives = 215/340 (63%), Gaps = 4/340 (1%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L +FEN+A ++ E N ++ + NR SL +++ P +E++D FR ++ + EA++ L Sbjct: 169 LKTEFENIALKVLEEKNAKITDLNRISLENIVFPFKEKIDEFRNKIDNLQTYEAEKMSGL 228 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 E+ L +N ++ EA NL ALKGDNK QG WGE+ L R+ E +G+ + YE+Q Sbjct: 229 QKELEKLISINNSVSAEAKNLANALKGDNKLQGTWGEMCLERIFEYAGMTKDVHYESQKQ 288 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 + D ++ PD IV+LP GK +VIDAK +LVAYE+Y+N +++ ++++L+EH +SV+ H Sbjct: 289 FKADDGKKI-PDYIVKLPDGKHIVIDAKTSLVAYEKYYNTQNEDDKKNSLKEHSSSVKRH 347 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 I L KDY LPGL +Y LMF+P++ A +ALD +P+LI A K NI +V+P+TLL Sbjct: 348 IDELATKDYISLPGLNQPEYALMFVPLDGAISIALDDKPDLIEYAFKKNIAIVTPSTLLA 407 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L+TI +WR E+Q +N +IA + LYD F++ + + + +A+ ++A+K+L Sbjct: 408 TLKTIQYIWRQENQKKNVIEIAKQGGSLYDNFVTFVEVLREADKKISEAKSKTQEAIKRL 467 Query: 411 SSG--RGN-VLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 S+ +GN ++A+A+ + LG K+EI DL + D Sbjct: 468 SASDKKGNSLIAKAQRLKDLGSPTKKEIPEDLLKNGDKND 507 >UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZP5_9FLAO Length = 441 Score = 267 bits (682), Expect = 8e-70, Method: Compositional matrix adjust. Identities = 145/392 (36%), Positives = 229/392 (58%), Gaps = 22/392 (5%) Query: 52 ITQSEHWRAECELLNNEVRSLQSINTSLEADL-------REVTTRMEAAQQHADDKIRQM 104 IT +E RAE + NE +Q+ T E +L RE + M+A Q+ Sbjct: 58 ITANEKLRAELKSEENERFQIQNKLTRKETELEGLVSKWREQKSEMQALQK--------- 108 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 + SE+FENLA RI E + + QN++++ +L PL+E+L F +++ + Sbjct: 109 -----KFSEEFENLAQRILEQKSEKFTLQNQKNIAHILDPLKEKLTSFETKIEKTNSDFL 163 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + L +++ L + N ++++EA NLT ALKG +KTQGNWGE++L +VLE SGL +G E Sbjct: 164 KGHIQLEQQLKYLNEQNLKISEEANNLTNALKGSSKTQGNWGEMILEKVLEKSGLTKGRE 223 Query: 225 YETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHI 284 Y+ Q +++ PDV+V LP K ++ID+K++L AYERY N++D+ + L+ H+ Sbjct: 224 YQVQQHFKDENGLSKLPDVVVYLPNEKKMIIDSKVSLKAYERYINSDDEQEKAGHLKAHV 283 Query: 285 ASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 S+ H++ L K+Y+ L G T D++LMF+P+EPA LA A ++NI++VS Sbjct: 284 KSMETHLKGLKDKNYELLGGNSTPDFILMFVPIEPALFLAQSENSNFFYSAFQDNILMVS 343 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 PTTLL LRT+ +W E Q +NA QIA A LYDK I+ + +G +D + Y Sbjct: 344 PTTLLSTLRTVDMVWSNEKQQQNAVQIAKHAGDLYDKFVNLIEGLDEVGNRIDSTKSTYD 403 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +AMKKL +G+ N++ + + +GV K+ +N Sbjct: 404 KAMKKL-TGKQNLIKDVTSLKEMGVTSKKVLN 434 >UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFZ0_9RHOB Length = 407 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 138/363 (38%), Positives = 223/363 (61%), Gaps = 1/363 (0%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 T+L + E+ + A ++ +D+KI + + + +F+ LA+ + + N + Sbjct: 31 TNLSNKVSELIAQGLAERKSSDEKIEILTQFRKDMESKFKELASEALQLQGESFSKSNIE 90 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 L + L PL+E + F ++++ + ++R L EI L + + Q++Q A+ L++ALK Sbjct: 91 KLEATLLPLKEHVGHFEKELRQVHEETVKDRERLKAEINQLSKKSDQISQNALELSKALK 150 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 GD++ QG WGE++L +LE SGLR G EYE Q +N+ R++PDV+V LP GK +VID Sbjct: 151 GDSQMQGAWGEMILESILEKSGLRVGEEYEIQAHRKNEDGERLRPDVVVNLPGGKTLVID 210 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K++LVAY N+E++ A + HI S+RNHI L K Y Q ++DYV++FIP Sbjct: 211 SKVSLVAYTDAVNSENEIDTIEAQKRHIVSIRNHINGLSAKGY-QFAENSSVDYVILFIP 269 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 +E A AL + A++ NI + +PTTL++AL+TI+N+W E +++NA+ IADRA Sbjct: 270 IEGALSEALRMDGRITEYAMEKNITIATPTTLMMALKTISNVWDVERRNKNAELIADRAG 329 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 KLYDK+ F+ +M +G+ L +AQD+Y A + S GRGNVL+Q E + LG + + I+ Sbjct: 330 KLYDKVSGFVLNMEKVGERLTQAQDSYDTAFNQFSKGRGNVLSQVENLKTLGAKTSKSID 389 Query: 437 PDL 439 D Sbjct: 390 TDF 392 >UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroidetes RepID=A0M0B0_GRAFK Length = 476 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 132/337 (39%), Positives = 221/337 (65%), Gaps = 3/337 (0%) Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 +++ +++FENLAN+I + + + N+Q++ ++L PL++++ F +V S E+ +R Sbjct: 123 QEKFTKEFENLANKILDQKSEKFTSLNKQNIENILDPLQKKIKDFEEKVTRS-DSESIKR 181 Query: 168 HT-LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 H L +++ L + + +++++A NLT+ALKGD K QGNWGE+VL RVLE SGL++ EY Sbjct: 182 HAELGEKLKFLNEQSLKISEDATNLTKALKGDTKMQGNWGEMVLERVLERSGLQKDSEYF 241 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q S + R+ PDVI+ LP K +V+D+K++L AYERY N ++ + + L+ H+ S Sbjct: 242 VQQSFNTEEGKRVMPDVIIHLPGDKKMVVDSKVSLNAYERYINEPEEDQKITHLKNHLIS 301 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VRN + LG K+Y L + + D+VL+FIP+E AF +A + P L ++A + NI++V+PT Sbjct: 302 VRNRVNELGNKNYHSLYQMESPDFVLLFIPIEAAFAIASNEYPSLYSDAFEKNIIIVTPT 361 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TLL L+TI ++W+ E Q +NA QIA +A LYD D++ IG+ + Q++Y A Sbjct: 362 TLLAVLKTIDSMWQNEKQKQNAIQIATQAGALYDSFTNLTDELLKIGRQIGTVQNSYEGA 421 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 MKKL +G+GN++ + E + LG + ++++ L +A Sbjct: 422 MKKL-TGKGNLIRRVEKLKKLGAKASKQLDQKLINRA 457 >UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SN95_STRM5 Length = 612 Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 142/373 (38%), Positives = 231/373 (61%), Gaps = 11/373 (2%) Query: 102 RQMINSEQR---LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 R++ N EQ+ LSEQF+ L+N I E + + E ++ SL+++++P ++ ++ F+ +V+ Sbjct: 235 RELANFEQQKASLSEQFKLLSNEILEAKAQALQESSKLSLSAVMTPFQQSIETFKLEVRQ 294 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 +E ++ L E+ L+ LN Q+ EA L+ AL+G K QGNWGE+VL VL+ SG Sbjct: 295 IHHRETTQQGELRKELEQLKALNQQITAEAHELSTALRGQKKLQGNWGELVLENVLDRSG 354 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRES 278 L+ +Y+ +VSI + R +PD +V LPQG+ ++IDAK++L AY RY NAEDD R+ Sbjct: 355 LQLDKDYQREVSITTE-EGRRRPDAVVYLPQGRHLIIDAKVSLNAYARYVNAEDDLERKQ 413 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN 338 AL+EH+ +V + I+ L +DY +LPGL + D V MFIP+E AF+ AL L +A++N Sbjct: 414 ALKEHVQAVASRIKELADRDYYKLPGLNSPDMVFMFIPIESAFVEALKADETLFQQAIEN 473 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 N+++ +PTTLL +L + LWRYE Q+++ +A+RA ++ K+ F+ I + L+ Sbjct: 474 NVLVATPTTLLTSLNIVRQLWRYEDQNKHTAALANRAEGVFRKLNSFLASFERIKKGLES 533 Query: 399 AQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 A + Y +A +L SG+GN++ Q F+ L IK ++ A++A + +P + Sbjct: 534 ATEAYTKAEGQLVSGKGNLVKQVGEFKNLAPAIKAQLPAYFADKAA-----LEIDFIPSE 588 Query: 459 PNDEAYQR--DDE 469 + EA R DDE Sbjct: 589 QSIEALNRAADDE 601 >UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurellaceae RepID=C9R7J4_AGGAD Length = 584 Score = 264 bits (675), Expect = 5e-69, Method: Compositional matrix adjust. Identities = 133/364 (36%), Positives = 226/364 (62%), Gaps = 2/364 (0%) Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 +T+L +L E+ T + ++H ++ + ++Q+L+ +F+NLANRI E ++R + N+ Sbjct: 202 HTALSQELAELKTTLTEKEKHFAEQQQNFEQTKQQLNTEFQNLANRILEEKSQRFQQTNQ 261 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 S++SLL P REQ++ F+++V + + + L EI+ + ++ M+Q+A NLT AL Sbjct: 262 ASMDSLLKPFREQIESFQKRVNEIHSESVKGNAGLEAEIKKVLEIGLSMSQQANNLTSAL 321 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KG+ KT GNWGE+ L R L+++GL E Y Q +N+ R PD I+ LP K ++I Sbjct: 322 KGEKKTLGNWGEMQLERALQSAGLLEDQHYTAQAHFKNEEGKRNYPDFILNLPDDKHLII 381 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D+KM+L AYE ++ED+ R++ L EHI ++RNHI L RKDY L G+R+ ++VLMF+ Sbjct: 382 DSKMSLNAYESAVSSEDEMERQAFLHEHIKALRNHIDDLSRKDYSNLIGVRSPNFVLMFV 441 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 VEPA++ AL P L N+++VS TTL+ LRT+ANLWR E + A++I+++A Sbjct: 442 AVEPAYIEALKMDPSLFGYGYDKNVIMVSHTTLMPILRTVANLWRVERGNAEAREISEKA 501 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 +Y+++ L + ++ +G SL +Y + L +G ++ + E F+ L + + + Sbjct: 502 GDIYNQICLLAERLAKVGNSLSAVSSHYNSTVTALVGQQG-LMGKVERFKALSAKASKTL 560 Query: 436 NPDL 439 P++ Sbjct: 561 -PNI 563 >UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7GVT5_CAMC5 Length = 530 Score = 263 bits (673), Expect = 7e-69, Method: Compositional matrix adjust. Identities = 161/432 (37%), Positives = 253/432 (58%), Gaps = 26/432 (6%) Query: 33 EQLAEREEMVAELSAAKQQITQS-EHWRAECELLNNEVRSLQSINTSLEADLREVTTRME 91 E L +E+++ EL A Q +S E + E E + + Q N L+ +L+ +T R+E Sbjct: 85 EFLKSKEQIIMELKVANIQSQKSVEDLKGELESVRATLNEKQEQNAKLDENLKILTARLE 144 Query: 92 A--AQQHADDKIRQMINSE-------------------QRLSEQFENLANRIFEHSNRRV 130 A +Q+ +K ++ S+ Q L+ +F+NLAN+IFE Sbjct: 145 AMGSQKSELEKSIEVQKSDLNAKEQNLRAQEENLAQLKQSLNLEFQNLANKIFEEKTSSF 204 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 ++ ++ SL LL PLREQ+ GF+ +V + + + +L +I+ + + M++EA + Sbjct: 205 NKTSQTSLELLLKPLREQIAGFQNRVNEVHSEAVKSSVSLEEQIKQVLNIGLNMSKEAHS 264 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 LT ALKG+NK GNWGE L R LE +GL +G Y TQ + ++++ R PD I+RLP Sbjct: 265 LTTALKGNNKIAGNWGEAQLERTLEFAGLIKGEHYFTQQNFKSESGDRAVPDFIIRLPDE 324 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 K +VID+K++L AYE +A D+ +AL EH+ SVR HI L +KDY L GL++ D+ Sbjct: 325 KHIVIDSKVSLNAYEEAVSAGDEAKASAALSEHVRSVRRHIDELAKKDYASLDGLKSPDF 384 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 VLMF+PVEPA++ A+ L + ++LVS TTL+ LRTIANLWR E ++ AQQ Sbjct: 385 VLMFMPVEPAYIEAMKFDTGLFNYGYERKVVLVSHTTLMPILRTIANLWRIERGNQEAQQ 444 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 IA RA ++Y+K+ D ++ +G +L+ A ++Y QA+ L G+ +L + E F+ L + Sbjct: 445 IAARAGEIYNKVCGVADALARLGGTLNTASNHYNQAVTSL-VGKQGLLGKVERFKQLSSK 503 Query: 431 -IKREINPDLAE 441 I+ E P++AE Sbjct: 504 AIQNE--PEIAE 513 >UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J9_9BACT Length = 550 Score = 263 bits (673), Expect = 9e-69, Method: Compositional matrix adjust. Identities = 136/415 (32%), Positives = 253/415 (60%), Gaps = 13/415 (3%) Query: 32 AEQLAEREEMVAELSAAKQQITQS--------EHWRAECELLNNEVRSLQSIN---TSLE 80 AEQ + E+++ KQ+I + E+ +++ EL + +L ++ T + Sbjct: 106 AEQTTLNTSLQNEINSLKQKIAEGNATNNSLKENLKSQKELNQKQADALVQLSDKITKIT 165 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A+ +T + A + + ++ ++ QFE +AN+I E + + E N+ ++ + Sbjct: 166 AENSTLTAKNSALTEKLSTQKEEITKMQETSHLQFEKMANQILEEKSGKFTETNKTNIEA 225 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 LL PL E +D F+++V++++ KE+++R +L +++ L + +++ EA NL ALKG K Sbjct: 226 LLKPLGENIDNFKKKVEETYDKESKQRFSLEEKVKELVEQTNKVSSEANNLATALKGQAK 285 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 QGNWGE++L +L+ SGL + EY Q +I+++ + ++PDV+V+LP + ++ID+K++ Sbjct: 286 KQGNWGEMILESILQKSGLVKDREYFLQQTIKDEGGNSLRPDVMVKLPDNRVIIIDSKVS 345 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 LV+Y+R+ +AE + L EH+ S+ HI L K Y L G +LD+ +MF+P+EPA Sbjct: 346 LVSYDRFSSAETTDEQTIHLAEHLKSIYGHIDDLHGKKYDALEG--SLDFTMMFVPIEPA 403 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 +L+++ + +L T A + I+L+SPT L+ L+ +A+LW+ E QS+NA +I R LY+ Sbjct: 404 YLISIQKDQDLWTYAYEKRILLISPTNLIACLKLMADLWKREMQSKNAMEIVRRGDLLYE 463 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 K F+ + +G+ ++K+Q +Y A+ +L+SG GN++ QA + LG++ +EI Sbjct: 464 KFVTFVSTLEDVGKHINKSQQSYNAAIGQLNSGSGNLIGQALKLKNLGLKSNKEI 518 >UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ3_9FLAO Length = 501 Score = 261 bits (666), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 130/375 (34%), Positives = 237/375 (63%), Gaps = 11/375 (2%) Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 +L A E+ + E Q+ D + ++I ++ QFENLAN+I E + N+ + Sbjct: 121 TLFAKNSELLAKNEGLQKSLDTQKEEIIKIQEESKLQFENLANKILEEKTEKFTTLNQNN 180 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L ++L P +E++ + +V +++ KE +ER +L +++ L +LN Q++++A LTRALKG Sbjct: 181 LKNILEPFQEKIADLKNKVNEAYEKENKERFSLAEKVKELAELNQQISEDAKKLTRALKG 240 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEY--ETQVSIEND-------ARSRMQPDVIVRLP 248 ++KTQGNWGE++L +LE SGL +G EY E ++ E++ + +M+PD +V+ P Sbjct: 241 ESKTQGNWGEMILESILEKSGLVKGREYFLEHELRDEDNNALFSEFSGKKMRPDAVVKYP 300 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 ++V+ID+K++L A+ + D L +H+ S++NHI L +K Y ++L Sbjct: 301 DERNVIIDSKVSLTAFTELVDETDVDVYAIKLSQHLGSIKNHINQLSQKAYDDYG--KSL 358 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+V+MFIP EPA++ A+ L A + I+L++P+ L+ +L+ IA+LW+ E+Q+RN+ Sbjct: 359 DFVMMFIPSEPAYIAAMQADQNLWNYAYERRILLLNPSNLITSLKLIADLWKREYQNRNS 418 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 +IA+R +KLYDK F+D++ +G++LD+A++ Y +A K+L +G N++ Q + + LG Sbjct: 419 MEIAERGAKLYDKFVGFVDNLEKVGRNLDQAKNVYNEAYKQLHTGNDNLVIQTQKLKSLG 478 Query: 429 VEIKREINPDLAEQA 443 ++ K+++ L + + Sbjct: 479 IKNKKDLPQSLIDNS 493 >UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B9E2_PARDP Length = 504 Score = 259 bits (662), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 144/362 (39%), Positives = 223/362 (61%), Gaps = 1/362 (0%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 + LE DL E + ++ A+ I + + ++ QF LA+ + + + + + Sbjct: 129 SRLERDLAETRLAAQKDREAAERDIATLRELREEMTGQFRLLASETLKSQGGEMQKVHGE 188 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 L++LL+P R+Q+ F+ ++Q +ER L +I L + + +++EA+ LTRALK Sbjct: 189 QLSALLTPFRDQVHRFQTELQARNKATDEERARLREQIEYLHKRSEDISREAVALTRALK 248 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 GD++ +G WGE++L R+LE SGL G Y+TQ S + +PDVIV++PQ K +VID Sbjct: 249 GDSQKRGAWGEMILERILEDSGLIAGTHYDTQSSHRDGDGKLWRPDVIVKMPQKKLLVID 308 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K++L AYE NAED TR++AL+ H+ASVR H+ L K YQ + ++DYVLMFIP Sbjct: 309 SKVSLNAYEEAVNAEDLPTRDAALRRHVASVRAHVAGLAAKGYQAIDE-SSVDYVLMFIP 367 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 VE AF AL P+L A++N + L +PTTL++ LRT+ ++W E + NA QIA RA Sbjct: 368 VEGAFSEALRVDPDLARFAMENRVGLATPTTLMLTLRTVDHIWTVERRESNAMQIAARAG 427 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +LYDK+ F+ + +G +LD+AQ ++ AM +L+ G GNV+ QAE R LG ++ I Sbjct: 428 QLYDKLHGFVSAVEDVGAALDRAQKSHATAMDRLTRGPGNVIRQAEMLRDLGARTQKRIA 487 Query: 437 PD 438 D Sbjct: 488 LD 489 >UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1AWD8_RUTMC Length = 378 Score = 256 bits (655), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 137/373 (36%), Positives = 246/373 (65%), Gaps = 16/373 (4%) Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMIN-SEQRLSEQFENLANRIF 123 LN +++L+S LE L E ++++ + D +IN ++ ++S+ F+ +A I Sbjct: 21 LNARLQTLKSDKIRLEVCLDE---KIKSYENQID-----LINIAKVQISKDFKAIAGDIL 72 Query: 124 EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 + + +N + LL+PL+ QL FR +++ ++ +ER TL+ +I NL++ + + Sbjct: 73 VKNRYDLSIKNSE----LLTPLQVQLKEFRDKIETITSEQIKERATLSVQIENLKKTSIE 128 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 + + NLT AL DNK QG+WGE++L+ +L +SGLREGYE++ Q +N++ ++PDV Sbjct: 129 IQETTQNLTNALTYDNKQQGDWGEMILSSILSSSGLREGYEFDVQKQFKNESGEILKPDV 188 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 ++ LP+ KD+++D+K++L AY Y + + + L+ H+AS+ HI + K+Y+ L Sbjct: 189 VLHLPEEKDIIVDSKVSLKAYNDYITNQ---SNKQLLKAHVASIEAHINGISIKEYENLQ 245 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 + TLD++ +FIP+E A L+AL+++P L T ALK NI+LVSP+TL+++L+T+ ++W+ E Sbjct: 246 DVLTLDFIFVFIPIESALLIALEKKPGLFTMALKKNIVLVSPSTLMMSLKTVHHIWQTER 305 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 Q++N+++IA +A +YDK+ FI M I + LDKA +Y++A KLS G+GN++ +A+ Sbjct: 306 QNQNSEEIARQAGAMYDKLFGFIQSMDDIEKHLDKASKSYKKARAKLSDGKGNLIGRAKK 365 Query: 424 FRGLGVEIKREIN 436 + LGV+ K+++N Sbjct: 366 LKELGVQSKKKLN 378 >UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacteroides RepID=B0NNN3_BACSE Length = 482 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 133/340 (39%), Positives = 209/340 (61%), Gaps = 10/340 (2%) Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 +R++ +FENL+NRIF+ N + L +LL PL E++ F+ +V+ + EA+ER Sbjct: 128 KRMNTEFENLSNRIFQSKTEDFTRLNAEHLGNLLRPLDEKIKDFKEKVEQVYSTEAKERF 187 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 +L I+ L +LN +++++A NLTRALKGD+K QGNWGE++L R+L+ASGL EG Y Q Sbjct: 188 SLGERIKELVELNNRLSEDANNLTRALKGDSKMQGNWGEMILERLLQASGLIEGEHYFRQ 247 Query: 229 ---------VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 + ++ +MQPD+++R P ++++ID+K++L AY Y +AED + Sbjct: 248 EFLKDERGEAIVSEESGQKMQPDILIRYPDEREMIIDSKVSLTAYAAYTSAEDRDEQARW 307 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L+ H+ SVRNHI L RKDY ++ D+V+MFIP E A+LLA+ L A Sbjct: 308 LKAHLQSVRNHIDELSRKDYSHYD-IKAPDFVMMFIPTEGAYLLAIQSDANLWEYAYNKK 366 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 ++L+SPT L+ ALR +LW+ E+Q +N Q I R + LY+K+ F D +G + Sbjct: 367 VVLMSPTNLISALRLSLDLWKRENQVKNVQAIIKRGTALYEKIVGFTDTFLTLGDRMATL 426 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 Q +Y +A+ +LS G G+V+ QAE + + + K+ I+ L Sbjct: 427 QKDYDKALNQLSEGNGSVVRQAEMLKDMSLTPKKRISARL 466 >UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassified Gammaproteobacteria RepID=A4A943_9GAMM Length = 477 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 149/439 (33%), Positives = 248/439 (56%), Gaps = 5/439 (1%) Query: 6 MVYAVIALV-GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +VYA+ L+ G I WL+ + ++ + + A+RE + A +++ E + + Sbjct: 11 LVYAIAGLIFGAIIAWLWRGAELSKTRGDLDAQRERLQELEIAHASLLSEREVLAEQFQS 70 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 +N V LQ SL ++ R A Q+ +++ + S+Q+L+ +FENLANRIFE Sbjct: 71 MNERVTELQLERNSLATTNAGLSARQTADQEKHKEQLALLERSKQQLAIEFENLANRIFE 130 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 ++ + N+QS+ SLL P EQ+ F+ ++ + + + +L E+R + + +M Sbjct: 131 ERGKKFSQDNQQSMESLLKPFGEQIHRFQSRINEVHAQSIRGNESLAGELRTMMGVGLKM 190 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ-PDV 243 + +A NL +ALKGD KT GNWGEV L R L+ +GL G YE Q S D+ R++ PD Sbjct: 191 SDQAENLAKALKGDKKTTGNWGEVQLERTLQLAGLEPGSHYEAQSSF-RDSEGRLRIPDF 249 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 +++LP GK ++ID+K++LV Y+R AE D R AL+ H A+++ HI L KDY L Sbjct: 250 VIKLPDGKHLIIDSKVSLVDYDRAVAAESDEERNEALKAHGAALKRHIDDLSSKDYSALS 309 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 G+ + + V MF+P+E A++ AL EL + + N+++VS TTLL LRT+A+LW Sbjct: 310 GMNSPELVFMFMPIEAAYIEALKFNRELFNDGYQKNVIMVSHTTLLPMLRTVASLWIAFR 369 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 + A++I+ A +Y+K+ L + + +G++L A D Y + + L G+ + + E Sbjct: 370 SNEEAREISGMAGDIYNKVCLVGNRLEDMGKTLSTATDKYNKTVTAL-VGKQGLYGKVER 428 Query: 424 FRGLGVEIKREINPDLAEQ 442 F+ K E+ P A Q Sbjct: 429 FKSTAANAKGEL-PKPATQ 446 >UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5WXK8_LEGPL Length = 630 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 131/370 (35%), Positives = 225/370 (60%), Gaps = 2/370 (0%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 R LQ N SL + E+ T +E ++H ++++Q+ ++ L+ +FENLAN+IFE + Sbjct: 206 RQLQERNQSLSNEYTELKTTLERKEEHFKEQMQQLNEAKLALTREFENLANKIFEEKGKA 265 Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 ++ S++++L P REQ++GF++++ + Q +L+ EI+ + + QM++EA Sbjct: 266 FTHNSQVSIDNILKPFREQIEGFQKRINEVHDASIQGNTSLSFEIKKVLDIGLQMSKEAN 325 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 NLT ALKG+++ +G WGE L R LE SGL E YE Q S ++ + Q D +++LP Sbjct: 326 NLTSALKGNSQQRGAWGEAQLRRTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPD 385 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 GK ++ID+K+TL AY+R AE + A+ EH+ +VR HI L KDY L G+R+ Sbjct: 386 GKHIIIDSKVTLNAYDRAVAAESPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPS 445 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +VLMF+P+EPA++ AL +L I+LVS TTL+ LRT++NLW E + A+ Sbjct: 446 FVLMFMPMEPAYIEALKSNKDLFEYGYNKGIVLVSHTTLIPILRTVSNLWMIERSNAEAR 505 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +I+++A ++Y+++ + + +S +G +L A ++Y +K L +G + + + F L Sbjct: 506 EISEKAGEIYNQVCIVAERLSKLGSTLSIASNHYNNTVKALVGQQG-LYGKVDRFSQLSA 564 Query: 430 EIKREINPDL 439 ++ + + P L Sbjct: 565 KVSKSM-PQL 573 >UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAS5_9RHOB Length = 472 Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 142/399 (35%), Positives = 232/399 (58%), Gaps = 15/399 (3%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 EM A+ +A K Q Q++H L + +LQS + +L+AD + A + Sbjct: 75 EMEAQRTAQKDQ--QAKHAD-----LQEKHAALQSAHAALQAD-------SDGKLASARE 120 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 +I ++ + + ++++FE+LA + +++ L+ LL P RE + F ++++ Sbjct: 121 RIEELKSLREEMAKKFEDLAAATLRKTGSEFSATHQEKLSELLKPFREHVSRFEVELREV 180 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 +ER L+ ++R+L + + EA LTRALKGD + QG WGE++L R+LEASGL Sbjct: 181 HRSADKERAQLSQQVRDLTIQSETVRSEAAALTRALKGDKQKQGAWGEMILERILEASGL 240 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 Y Q + +R +PDV+V+LP+ K ++ID+K++LV+YE NAE + R Sbjct: 241 ERDVHYMVQQQRTGEDGARYRPDVVVQLPRKKCLIIDSKVSLVSYEAAVNAETEEERAEH 300 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L+ H A+VR H+ L K Y L +DYVLMF+P+E A AL+ P+L + A+ + Sbjct: 301 LKAHAAAVRRHVTQLADKAYYALEDT-AVDYVLMFMPIEGALAAALNEAPDLASFAVSRH 359 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 I L++PTTL+V LRT+ ++W E + NA+ IA RA +LYDK+ F+ D++ +G +L KA Sbjct: 360 IGLMTPTTLMVTLRTVEHIWTVERRESNAEDIAKRAGRLYDKLANFVGDLTKVGDALGKA 419 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + +A+KKL+ GRGN ++Q E + +G + I D Sbjct: 420 SQAHEEALKKLTHGRGNAISQVETLKQMGARATKSIAID 458 >UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria RepID=B7S2L4_9GAMM Length = 486 Score = 251 bits (640), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 154/442 (34%), Positives = 245/442 (55%), Gaps = 24/442 (5%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQL-----AEREEMVAELSAAKQQITQSEHWR 59 +++ IA G+A+G L + Q AE+L A EE+ EL++A + I+ E R Sbjct: 9 LIIAGSIAFGGIALGLLIGVIR-GQGIAERLRLQMTASNEELQLELASATRVISGLEVER 67 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ-QHA-------------DDKIRQMI 105 + + E R+ S LE DL R +A Q +H ++ + Sbjct: 68 NQLQERLQEGRTALS---KLENDLDSHGRRYQALQNEHTRLHTQQEEREEQHQSQMTLLK 124 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 + L ++FE LANRIFE + N++SL SLL P REQ+ GF+ ++ + + + Sbjct: 125 EARDNLKQEFELLANRIFEDKGKSFTSTNKESLESLLKPFREQISGFQSRINEVHTEAVK 184 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 L EI+ + ++ +M +A NL ALKGD KT GNWGE L R LE +GL G Y Sbjct: 185 GNTALEAEIKKVFEIGLEMNSQATNLATALKGDKKTTGNWGEAQLERTLELAGLLPGDHY 244 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 E Q S + R PD I++LP+ K +VID+K++LV Y+R +A + + AL+ H Sbjct: 245 EAQASFTDAQGKRRLPDFIIKLPEKKCLVIDSKVSLVDYDRAISAATEEEQSEALRSHAQ 304 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +VRNHI L KDY L G+ + D+VLMF+P+EPA++ A+ +L + +++VS Sbjct: 305 AVRNHIDDLSSKDYSNLSGVDSPDFVLMFMPIEPAYIEAMKYNKDLFNYGYQRQVVMVSH 364 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTL+ LRT+ANLW + +R A++I+ RA ++Y+++ L + + +G +L A ++Y Q Sbjct: 365 TTLMPILRTVANLWMIDQSNREAREISTRAGEIYNQVCLVAERLHKLGNTLKSANNHYNQ 424 Query: 406 AMKKLSSGRGNVLAQAEAFRGL 427 +K L+ +G ++ + E FR L Sbjct: 425 TVKGLAGQQG-LVGKVERFRQL 445 >UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DC11_9PROT Length = 415 Score = 250 bits (639), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 130/358 (36%), Positives = 224/358 (62%), Gaps = 18/358 (5%) Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 L +D ++++ + ++ ++++ ++++L +FE LAN IF+ + +N +++ Sbjct: 73 LNSDFSALSSKFQEKEKFY----KELLENKEKLKNEFEVLANSIFD----KFSIKNEENI 124 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + +L P+ +Q+ F ++ K+ + L +E++NL++LN +++ EA NLT+ALKGD Sbjct: 125 SKILDPISKQVKDFEEKIIYLKEKDIE----LMNELKNLKELNYKLSVEAENLTKALKGD 180 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 K QG WGE++L RVLE SGLR+ E+ + S+ + +PDVIV+LP + ++IDAK Sbjct: 181 KKIQGIWGEMILERVLEMSGLRKDKEFIREKSLICNGEV-FRPDVIVKLPNNRYIIIDAK 239 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 +L AY Y ED +S L+EHI +++NHI L K+Y+ L G+ TLD++ MFIP+E Sbjct: 240 TSLNAYSEYIKTED----KSYLKEHIKAIKNHIDKLASKNYENLDGINTLDFIFMFIPIE 295 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 A +AL+ L A K ++L +P+TLLV+LR+I +WR+E Q+ N +++ A + Sbjct: 296 NALKVALEYDSTLYEYAFKKRVILTTPSTLLVSLRSIEAIWRFERQNENIKEVIKLADNI 355 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR-GLGVEIKREI 435 Y+KMRLF++D I +S++ + Y A KL SGRGN++ E + G++ K+E+ Sbjct: 356 YNKMRLFLEDFEKIDRSIEYTKKYYLNAKNKLISGRGNLIDLLENMKEKAGIKPKKEL 413 >UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylobacterales RepID=Q30U13_SULDN Length = 626 Score = 250 bits (638), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 142/403 (35%), Positives = 231/403 (57%), Gaps = 4/403 (0%) Query: 68 EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE-QRLSEQFENLANRIFEHS 126 ++ SLQ N L+A+ + + +AQQ ++K+++ + ++L + + + + Sbjct: 227 KIESLQESNGELKAEKSKFQAEL-SAQQENNEKLKKDFEEQSKKLELKLNEIMQQNLDSK 285 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 ++ DE + +SL+ LL P +E LD F+++V+DS ++ L+ EI + + +++ Sbjct: 286 LKKFDETSMKSLDGLLKPFKENLDTFKKKVEDSQENSTKKFAELSKEIEQVTKAGMNISK 345 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 EA +LT+ALKG + QG+WGE++L VLE SGLR+G YETQ S +++ + +PDVI++ Sbjct: 346 EAESLTKALKGKKQMQGSWGEMILESVLEYSGLRKGAHYETQESYKDEEGNTKRPDVIIK 405 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 LPQ + ++ID+K++L Y Y +AE D R A + S +NHI L KDY + Sbjct: 406 LPQERTIIIDSKVSLNDYSNYIHAETDEERLLATNGIVTSFKNHIDTLDSKDYAHYK-VG 464 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 TL YV MF+P+E AF +A+ + P+L ALK +I +V+P+TL V+LRTI W+ E + Sbjct: 465 TLQYVFMFVPIEGAFAMAIQQDPKLYEYALKKHIAIVNPSTLTVSLRTIYLYWQSEQSNT 524 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 A ++ D A KLYDKM F D IG+ L A Y A K+L+ G GN++ + E + Sbjct: 525 LASKLFDEAGKLYDKMVGFSDSFGKIGKQLQSATSTYEHAHKQLTEGPGNLMGRVENLKR 584 Query: 427 LGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDE 469 LG + + E + E + +PE P E DD+ Sbjct: 585 LGARTSKTLKDSKMEFQDFDEAEMEIELLPE-PVIETLSSDDD 626 >UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUF2_9GAMM Length = 462 Score = 249 bits (636), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 135/385 (35%), Positives = 232/385 (60%), Gaps = 5/385 (1%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A+LR R E ++ +++ Q S L ++FE L+ I ++ + + NR+S+ + Sbjct: 79 AELRAAQARQEERDRNHQEQLAQFEASRALLKQEFEVLSQTILKNKEQELKAGNRESIGA 138 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 LL+PL +Q+ F++ V + G+ + +L+ +++ L+ ++ M+ EA +LTRALKGDNK Sbjct: 139 LLNPLEKQIQNFQQNVNELRGEFLKSNTSLSEQLKALEGVSLSMSAEANSLTRALKGDNK 198 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 GNWGE L + L+ +GL G +ETQ + ++ ++ PD +VRLP+ K++VIDAK++ Sbjct: 199 IAGNWGETQLEKTLQLAGLNPGEHFETQAAFKDVEGRKLIPDFVVRLPKDKNLVIDAKVS 258 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 LV YER +AE D RE+AL H S+RNHI L KDY LPG+ + D+VLMF+ VEPA Sbjct: 259 LVDYERAISAETDVEREAALAAHGRSMRNHIDGLSSKDYANLPGMASPDFVLMFVSVEPA 318 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 ++ A+ + +L + N+++VS TTL+ LRT+ANLW E + AQ+I+DRA ++++ Sbjct: 319 YIEAMRQNRDLFNYGYQKNVIMVSHTTLMPILRTVANLWMIERSNAEAQEISDRAGEIFN 378 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 + + + +G SL A ++Y + + L GR + + + F+ L + + P+ Sbjct: 379 AVCTVAERLEGLGGSLQAASNHYNKTVTAL-IGRQGLHGKVDRFQSLSAKANKTF-PESL 436 Query: 441 EQAVSQDEEYRLRSV---PEQPNDE 462 + ++++ RL + P +P +E Sbjct: 437 QPIGTENDAPRLGATFDAPPKPPEE 461 >UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z617_9GAMM Length = 564 Score = 248 bits (632), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 130/334 (38%), Positives = 201/334 (60%), Gaps = 2/334 (0%) Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 NS + LS+QFENLAN++FE ++ + N +L LL PL+EQ+ GF+ +V + + Sbjct: 172 NSSESLSQQFENLANKVFEQKGKQFADANHTTLGGLLKPLQEQIAGFQSRVNEVHDASTK 231 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 +L I ++ L ++ Q+A NLT ALKGD++ +G WGE L R LE SGL EG Y Sbjct: 232 NHTSLQQAIDGVKDLGLKIGQDASNLTTALKGDSQQRGAWGEAQLQRTLEISGLIEGDHY 291 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 Q S + A + D +VRLP+ + ++ID+K+TL AYER AE + A+ EH+ Sbjct: 292 TMQDSFSDGAGKIKRTDFLVRLPENRQLIIDSKVTLNAYERTIAAETPEEYKRAMTEHVH 351 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +VR HI L KDY L G+++ YVLMF+P+E A++ AL EL I+LVS Sbjct: 352 AVRKHIDDLASKDYTNLTGMKSPSYVLMFMPMESAYIEALKHNKELFQYGFSKQIVLVSH 411 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTL+ LRT+ANLW E + A++I+D A+ +Y+K+ + + ++G SL ++Y + Sbjct: 412 TTLIPILRTVANLWMLERSNAEAKEISDMAADIYNKVAGVAEGLRSLGGSLTTVGNHYNK 471 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 A+ L +G+ + + + FR + +I +E+ PDL Sbjct: 472 AVVAL-AGKQGLFGKVDKFRKISTKISKEL-PDL 503 >UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4C5_9BACT Length = 446 Score = 244 bits (622), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 155/448 (34%), Positives = 252/448 (56%), Gaps = 42/448 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEM-VAELSAAKQQITQSEHWR 59 M++ +++ A+I VG AIG AS + A + E E E VA A ++ E +R Sbjct: 1 MEYLLIIAALI--VGGAIGAWTASRRFAGKVEENRREAETARVALAEAEAEKRLMQEGFR 58 Query: 60 AECELL-NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 E ELL + R+ Q + + TR+E L E+F++L Sbjct: 59 REQELLAGQQERARQEQEKAWQ-------TRLEL------------------LKEEFKSL 93 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 ++RIFE + ++ N++ L SLL+PL+E++ F+ V++S K + L + + Sbjct: 94 SDRIFEEKSGKLQSANKEQLESLLNPLKEKMTEFKTAVEESKVKGIELNTALNTRLSRMM 153 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI-ENDARS 237 + ++ EA NL ALKG KTQG+WGE++L +L+ SGL+ G YE Q ++ ++D R+ Sbjct: 154 EETLRIGSEAKNLADALKGGQKTQGDWGEMILEDILKRSGLKPGIHYECQATLRDDDGRT 213 Query: 238 -------RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 RM+PDV++ P GKDV++D+K++LVAY Y N++D+ +R++AL HI S+R H Sbjct: 214 VADPDHGRMRPDVVIHYPDGKDVIVDSKVSLVAYLDYMNSQDEESRKTALARHIRSIRTH 273 Query: 291 IRLLGRKDYQ---QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 I L +K+Y T+D+V+MFIP E + LA+ +P L EA K +M VSP+ Sbjct: 274 IDELAKKNYSARLNRSDRETVDFVIMFIPNEGPYQLAMISEPSLWAEAFKLKVMPVSPSN 333 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ L+ I W E QSRN ++I D A+++ +++ F + +G++LDKA+D Y A+ Sbjct: 334 LIALLQLIHTAWTREDQSRNQREILDTAAQMLERIYAFYEQFDEVGRTLDKARDVYDAAV 393 Query: 408 KKLSSGRGN--VLAQAEAFRGLGVEIKR 433 ++L G N V+ E R LGV++ + Sbjct: 394 RRLKHGERNRSVVLAGEKLRKLGVKMAK 421 >UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MXW6_PORGI Length = 432 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 148/444 (33%), Positives = 242/444 (54%), Gaps = 36/444 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD ++ ++A+V + WLF H + E + + A+L AA +++ Sbjct: 1 MDLYWLII-IVAIVAGLVVWLF----HRRHNTET----DRLTAQLEAATEKLAD------ 45 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 L E + I T LE L+ T+ +E + + +M Q L F+ A+ Sbjct: 46 ----LQEEQKEAIRIRTELETRLQATTSELEREWKRSGQISEEM----QAL---FKATAS 94 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 I E R++ N + + +L PL E + F +V+ S+ +EA+ER +L E++ L + Sbjct: 95 EILEDKTRKLSGMNEERIGEILKPLSEHIKLFEEKVEKSYNEEARERFSLAKELQKLIEQ 154 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND-ARS-- 237 N++++ +A NLTRALKGD K QG+WGE++L +L SGL EG E+ Q ++ ND R+ Sbjct: 155 NSRLSDDANNLTRALKGDPKVQGDWGEMILENLLRRSGLTEGEEFFIQETLTNDEGRTLL 214 Query: 238 ------RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 RM+PDVIVR P G++V+ID+K++L AY + +ED+ R+ L EHIAS+ HI Sbjct: 215 HDETGRRMRPDVIVRYPNGQEVIIDSKVSLTAYASFVASEDEAERKRLLGEHIASISRHI 274 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K YQ + ++V++FIP EPA+ LAL +P L +A ++L++PT L+ A Sbjct: 275 EELASKSYQDYCD-KAPEFVMLFIPNEPAYTLALREKPTLWDQAYNKRVLLMNPTNLIAA 333 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LR +LW+ + Q +N Q+I ++A+ LYDK F + + + +A +L Sbjct: 334 LRMALDLWQRDRQVKNVQRIVEQANGLYDKFCTFAETLIRAEEQAQNTVATLAKARGQLV 393 Query: 412 SGRGNVLAQAEAFRGLGVEIKREI 435 GR N++ + E R LG+ K+ + Sbjct: 394 EGRSNIVGRIEKMRSLGLSPKKNV 417 >UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 Tax=Campylobacter concisus 13826 RepID=A7ZBP6_CAMC1 Length = 510 Score = 241 bits (615), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 122/322 (37%), Positives = 200/322 (62%), Gaps = 4/322 (1%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L+ +F NLAN+IFE + + +++SL LL+PL E++ F ++V D+ + L Sbjct: 172 LNLEFANLANKIFEEKSANFSKNSKESLELLLTPLGEKITSFEKRVNDAHSDSQKSAGEL 231 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 + +++ + +L M++EA +L+ ALKG NK GNWGE+ L R LEA+GL +G Y TQ S Sbjct: 232 SAQLKEVVELGKNMSKEANSLSTALKGSNKVLGNWGEMQLERTLEAAGLEKGTHYATQES 291 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 + + ++ PD ++ P K ++ID+K++L AYE+ A D + AL EHIAS++ H Sbjct: 292 FDASGK-KLIPDFVINFPDDKQMIIDSKVSLHAYEKAVAAADLAQSKLALGEHIASIKKH 350 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 I L +KDY L +++ D+VLMF+PVEPAFL AL P L + ++LVS TTL+ Sbjct: 351 IDELAKKDYSSL--VKSPDFVLMFVPVEPAFLEALKFDPNLFNYGYEKKVVLVSHTTLMP 408 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 LR +ANLWR EH ++ A++I A+++Y+K + ++ +G S+ DN+ + +K + Sbjct: 409 LLRVVANLWRMEHGNKEAKEILKSANEIYEKFCTIAEKLNRLGNSVRSVNDNFNEVVKSV 468 Query: 411 SSGRGNVLAQAEAFRGLGVEIK 432 SG+G + ++ E F+ + + K Sbjct: 469 -SGQGGLDSRLEKFKKIALNPK 489 >UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PD09_9BACT Length = 438 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 134/380 (35%), Positives = 220/380 (57%), Gaps = 18/380 (4%) Query: 72 LQSINTSLEAD-LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 +QS+ + +E + L R E+ QQ A K+ + QR++ + + +A + Sbjct: 55 VQSMKSQMENERLYAAKLRAESDQQWAQ-KLESLKQEMQRMTIEQQKVAAEQLAAKQSAL 113 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFG------KEAQERHTLTHE---------IR 175 E NR ++ LL P++EQ F++ V++S KE Q T + + Sbjct: 114 QENNRLQMDELLKPIKEQFADFKKSVEESKTQNEVNKKELQNTFEATMKLFQQEQQQAVL 173 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 NL++ ++ +A NLT+ALKGD+K QG+WGE+VL +LE SGLR+ E+ Q +++ Sbjct: 174 NLKEQTEKIGSDAANLTKALKGDSKMQGDWGEMVLETILENSGLRKNEEFFIQEYTKDEE 233 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 +PDVIVR P+G+ VVID+K++L AY AED+ +E ++ H SVR HI L Sbjct: 234 GKNYRPDVIVRFPEGRSVVIDSKVSLTAYSDALAAEDEAEQERLMKAHALSVRKHIDELA 293 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 KDY +L + +VLMFIP E +++ A+ +QP+L A + I+++SP+ LL+AL+ Sbjct: 294 AKDYSKLVD-DAIGFVLMFIPNETSYIAAMKQQPDLSRYAYQKKIIIISPSNLLMALQLA 352 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 NLW+Y+ Q++N ++I A+ LYDK+ F D ++G + + + +A K+L G G Sbjct: 353 YNLWQYDRQNKNVEKIVKTAADLYDKVAGFEDTFMSVGDLITRLSGTFDKAKKQLYDGTG 412 Query: 416 NVLAQAEAFRGLGVEIKREI 435 NV+ + E+ +GLGV K++I Sbjct: 413 NVMRRVESLKGLGVTPKKQI 432 >UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G5_9PORP Length = 447 Score = 231 bits (589), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 149/451 (33%), Positives = 246/451 (54%), Gaps = 34/451 (7%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQIT-QSEHWR----- 59 M+Y++IA + V F + + +RE+ AE+ A+ I+ Q E R Sbjct: 1 MIYSLIAAIVVVFCLAFLLLREHRISLSIREKREQEQAEIVEARTLISVQKEEIRRVTEE 60 Query: 60 -----AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQ 114 + E L +E +L+ + + + + +E A+Q D+ ++ L Q Sbjct: 61 SVQRQSALEQLRSEKENLEHEGYRWQIECQHLQRALEEAKQKNQDQAKE-------LQLQ 113 Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 F+ +A +I E ++ + +N ++L PLRE ++ ++V++++ E++ER L I Sbjct: 114 FKEIATQIVEERSKTLGVRNEETLR----PLREDIERLGKRVEETYSAESRERILLQSTI 169 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 R L Q + ++ E L +ALKGD+K QG+WGE++L +L++SGLR G EY Q ++ ++ Sbjct: 170 RELMQQSGTLSTETNALIKALKGDSKVQGDWGEMILENILQSSGLRRGEEYMVQETLRDE 229 Query: 235 ---------ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 RS ++PDVIVR P G +VID+K++L AY RY AEDD R+ QEH+ Sbjct: 230 QGDVLHPAGERSALRPDVIVRYPNGGAMVIDSKVSLTAYSRYIAAEDDEERKHFAQEHLD 289 Query: 286 SVRNHIRLLGRKDYQQ-LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 SVR HI L K Y + + G D+V++FIP +PA+ LAL + P L A K ++L++ Sbjct: 290 SVRKHIAELSAKRYPEFITG--APDFVVLFIPNDPAYSLALTQDPALWETAYKKGVVLIN 347 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 T L+ LR ++W+ + Q +N ++I RAS +YDK + + + KA ++ R Sbjct: 348 GTNLIAVLRMAQDMWQRDRQIKNVEEIVRRASTMYDKFCTYAATLVETEDKMVKATESLR 407 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 +A +LS GRGN + Q E R LGV+ + I Sbjct: 408 KARGQLSEGRGNFIHQMEQLRELGVKNTKNI 438 >UniRef50_UPI000190CB97 DNA recombination protein RmuC n=2 Tax=Salmonella enterica subsp. enterica serovar Typhi RepID=UPI000190CB97 Length = 157 Score = 224 bits (572), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 118/158 (74%), Positives = 133/158 (84%), Gaps = 3/158 (1%) Query: 1 MDFSIMV-YAVIALVGVAIGWLFASYQHAQQ-KAEQLAEREEMVAELSAAKQQITQSEHW 58 MD ++M+ V G IGWL A+ HA Q +A+ + ER E+ ELSAA+QQ+ Q HW Sbjct: 1 MDITLMISAVVALAAGAVIGWL-ATKAHADQIRADLIEERRELDIELSAARQQLAQEAHW 59 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 R+ECELLNNE+RSL SINTSLEADLREVTTR+EA QQHA+DKIRQMINSEQRLSEQFENL Sbjct: 60 RSECELLNNELRSLHSINTSLEADLREVTTRLEATQQHAEDKIRQMINSEQRLSEQFENL 119 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 ANRIFEHSNRRVDEQNRQSLNSLL+PLREQLDGFRRQV Sbjct: 120 ANRIFEHSNRRVDEQNRQSLNSLLTPLREQLDGFRRQV 157 >UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PT19_9BACT Length = 432 Score = 224 bits (571), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 127/376 (33%), Positives = 215/376 (57%), Gaps = 26/376 (6%) Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL-------ANRIFEHSNRRVDEQN 134 +L+ +E +QHA++ ++ S+QR ++ ++L A R + + N Sbjct: 55 NLQRANQNLERERQHAEEMRKE---SDQRWEQKLDSLKKDMQSTAARELAAKQEELQKAN 111 Query: 135 RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL---------------THEIRNLQQ 179 R ++ LL P++EQ F+R V +S + + L + +L+Q Sbjct: 112 RTQMDDLLKPIKEQFTDFKRAVDESKTQNEVNKTELQKAFESTMKLFQQQQQQTVDSLKQ 171 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 ++ ++A NL+RALKG+NKTQG+WGE+VL +LE SGL+ G E+ Q +++ + + Sbjct: 172 QTERIGEDAANLSRALKGENKTQGDWGEMVLETLLENSGLQRGEEFFVQETVKTEDGATF 231 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PDV+VR P+G+ VVID+K++L AY D++ R+ L EH SVR H+ L K Y Sbjct: 232 RPDVVVRFPEGRSVVIDSKVSLTAYADAVATNDEHERDRLLAEHAKSVRRHVDELSAKSY 291 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 +L + +VLMF+P E +++ A+ +QP+L A + I+++SP+ LL+AL+ NLW Sbjct: 292 DKLVE-DAIGFVLMFVPNENSYIAAMKQQPDLSRYAYQKRIIIISPSNLLMALQLAYNLW 350 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 +Y+ QS+N ++I A+ LYDK+ F + + + L++ N+ QA +L G+GNVL Sbjct: 351 QYDRQSKNVEKIVKTAADLYDKVAGFTETFTELESQLERLARNFGQARGQLFEGKGNVLR 410 Query: 420 QAEAFRGLGVEIKREI 435 + + R LGV K+ I Sbjct: 411 RIDGLRALGVTPKKRI 426 >UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LJF3_9BACT Length = 401 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 206/342 (60%), Gaps = 11/342 (3%) Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 + L ++F +A+ + + + ++ ++L +LL P L F + + G A R Sbjct: 69 EELKKEFHAIASDLARTESESLQHRHTEALRALLHPFDADLKRFYDRFTE--GNVAM-RT 125 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 + IR Q + Q A LTRAL+G+ K QGNWGE +L +LEASGLR G EY+TQ Sbjct: 126 NIEQLIRQTQTVGKQ----AEELTRALRGNTKVQGNWGEGILADLLEASGLRIGQEYDTQ 181 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 V+++++ R +PDV+V LP ++++IDAK++L AY Y NAED+ + ++EH+ SVR Sbjct: 182 VNVKDEQRDNYRPDVVVHLPDKRELIIDAKVSLSAYVNYVNAEDEVEQARFMKEHLQSVR 241 Query: 289 NHIRLLGRKDYQQL-PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 HI L K Y +L PG + YVL+FIP E A++ A+ P+L EA + I+L++PT Sbjct: 242 KHIAELSAKRYDKLVPG--AIGYVLLFIPNEAAYVAAVSSAPDLSMEAYRKQIILINPTN 299 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 LL+AL+ NLW+ E QS N + I A KLY+K LF + + +G +L +Y +A Sbjct: 300 LLMALQLTYNLWQSEKQSANVRDIYASAEKLYNKFTLFAESFAKLGDNLQTLTSSYEEAQ 359 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 K+L++GRGN++++ E++R G+ R + PD A + D+E Sbjct: 360 KRLTTGRGNIISRLESWREKGLTPARSM-PDALLDATADDDE 400 >UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHM6_9HELI Length = 457 Score = 220 bits (561), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 124/362 (34%), Positives = 215/362 (59%), Gaps = 18/362 (4%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH-T 169 ++++F ++ ++ E NR+ E+ SL PL +++ F+ ++ K+ QERH Sbjct: 100 MTQRFYEISEQLLEEKNRQFQEKQSDSL----KPLCDEIMRFKTEIA-QHTKDNQERHIA 154 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L EI++L++ + +++ +A NL A++GD+K QG WGEV+L R+LE+SGL++ EY TQV Sbjct: 155 LNTEIKHLKEASLKISADATNLANAMRGDSKLQGQWGEVILERLLESSGLQKDREYYTQV 214 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 ++N+A+ ++PDV++ LP + VV+D+K++L AYER+FNA D ++E L HI SV+N Sbjct: 215 FVKNEAKEILRPDVVIHLPNNRFVVVDSKVSLSAYERFFNATD--SKEMHLNAHIESVKN 272 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 HI+ L K YQ LD+V+MF+P+E A+ L +L ++ I+L +PTTL+ Sbjct: 273 HIKSLSLKQYQHCIEGGQLDFVIMFMPLEGAYSAILQHDMQLFLDSYNKGIILAAPTTLM 332 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 V LR I ++W E + +N +I KL K F + M I ++L+ AQ+ Y +A + Sbjct: 333 VILRLIHHIWSNEAKDKNITKILQECVKLIKKFDGFTESMEKISRALETAQNAYEKAEIQ 392 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDLA-------EQAVSQDEEYRLR--SVPEQPN 460 + GRG++ + + +I + P + E ++++EE ++ ++PE Sbjct: 393 I-RGRGSLGSYIKNLDNYMSQITTDTKPQTSPKNNETLESHINKEEEEHIQNDTMPETTE 451 Query: 461 DE 462 DE Sbjct: 452 DE 453 >UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=Q7VK39_HELHP Length = 456 Score = 219 bits (559), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 139/430 (32%), Positives = 231/430 (53%), Gaps = 26/430 (6%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +++ A L G +I WL+ ++ +++++ +A L Q + +H + Sbjct: 10 LIICASFVLSGGSI-WLWLHHRFKKKQSQLIATHNATTQSLQIQIQNL--EKHIQTLSLE 66 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQF--------- 115 +LQ I +S L ++ EA + MI++ L EQF Sbjct: 67 YAQATTTLQMIESSHTQRLNDMQKVCEARLLEEKTRSEHMIHT---LKEQFYHTQEEQDK 123 Query: 116 --ENLANRIFEHSNRRVDEQNRQSLNSL----LSPLREQLDGFRRQVQDSFGKEAQERHT 169 E L N F+ + + QN QS N + L PLRE++ F +Q+ D+ + Sbjct: 124 NKEELKNA-FKAISADILRQNTQSFNQMQLLSLQPLREEITRFTKQLNDNHTATLTQHTA 182 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L +I L +LN Q++ +A NLT ALKG NK QGNWGE++L RV E SGL+EG EYE Q+ Sbjct: 183 LQTQIEQLSKLNVQLSNDAHNLTNALKGGNKAQGNWGEIILQRVFENSGLQEGREYELQI 242 Query: 230 SIENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 S+ ++ ++PD IV+LP+ + V++D+K +LVAYE+ NA+++ + SA +E Sbjct: 243 SMRDEQSQILRPDAIVKLPKSGNEQRCVIVDSKTSLVAYEKLCNAQNEMQKLSAQKELAH 302 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 S++ H L K+Y Q + LD+VLMFIP+E AFL A+ L A + ++LVSP Sbjct: 303 SIQMHFNNLSAKNYHQYLQGQKLDFVLMFIPIEGAFLEAMQYDSTLYDRAYQKGVVLVSP 362 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TT++ L+ I NLW+ E++ +N +I + KL++++ F + + +G+++D + Y Sbjct: 363 TTIMAVLKIIHNLWQIEYRDKNINKIFNEIKKLFERIEKFENVLEQLGRNIDTMRKTYDD 422 Query: 406 AMKKLSSGRG 415 M K + +G Sbjct: 423 VMTKYNGKQG 432 >UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XY83_9BACT Length = 477 Score = 208 bits (529), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 141/478 (29%), Positives = 257/478 (53%), Gaps = 54/478 (11%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAE-----QLAEREEMVAELSAAKQQITQSEHWRA 60 M Y + L+G I +L+ Q+ ++ + LA+ + + +AAK + ++ +A Sbjct: 1 MFYILTFLLGALIVYLWLKAQNTKELGQLKTDLSLAQNQLSIVRENAAK---SLADAKQA 57 Query: 61 ECELLNNEVRSLQ--------SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR-- 110 E L N+ ++ + ++ SL+A R+E ++HA + +R+ + E Sbjct: 58 AAEKLENQQKTFEVRLSSEKEAMAKSLQAVKDNAQERIEQEREHAAN-LREELQKENENK 116 Query: 111 ---LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE- 166 L E+ N+ ++ ++++ ++ L++LL+PL+E+L+ F + V S KE+ E Sbjct: 117 LKLLQEEVRNMGEQMLTEHRQKLNTADKDRLDALLNPLKERLEAFSQTVTKS-SKESAEA 175 Query: 167 ----RHTLTHEIRNLQQ-------------------LNAQ---MAQEAINLTRALKGDNK 200 R T ++ LQ+ L Q + +A +LT+ALKGD+K Sbjct: 176 KTEIRTTFEESLKRLQEGQKHNIELMREDHLRAVEELKKQTERIGNDAASLTQALKGDSK 235 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 QG+WGE++L LE GL++G +Y Q +++++ + +PD I+ P + VIDAK++ Sbjct: 236 MQGDWGEMILEHTLEDCGLKKGEQYFLQENVKDEDGNNYRPDAIIAFPNNERAVIDAKVS 295 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL-PGLRTLDYVLMFIPVEP 319 L AY+ AE ++ L+EHI SVR H+ L K+Y L PG + YVLMFIP E Sbjct: 296 LTAYQAALKAESKDEQDKYLKEHIKSVRTHVDELAAKNYDVLVPG--CIGYVLMFIPYES 353 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 + A+ ++ A + +I+++SP+ LL+AL+ +W+ ++N ++I +++ LY Sbjct: 354 GYSAAIKTDASILQYAYRKHIIILSPSNLLMALQLTHTMWQNYRLNKNVEEILRQSNDLY 413 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 DK LF + IG S+D+ + Y +A +L++G+GNV+ + E+ + LG+ K+E NP Sbjct: 414 DKFALFAETFINIGASIDQLKTRYDKARGQLNTGKGNVVRKLESLKALGITPKKE-NP 470 >UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VKL2_9BACT Length = 443 Score = 202 bits (515), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 111/383 (28%), Positives = 223/383 (58%), Gaps = 35/383 (9%) Query: 89 RMEAAQQHAD---DKIRQMINSEQRL-SEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 ++EA ++H + D++++ ++ RL E+ N+A ++ + S +++ +++ L++LLSP Sbjct: 64 QLEAERKHGEQLRDELQKQAEAKNRLLQEEVRNMAAQMLDESREKMNTADKERLDALLSP 123 Query: 145 LREQLDGF--------------RRQVQDSFGKEAQERHTLTHE-------------IRNL 177 L+E+L+ F + +++ +F +EA +R E ++ L Sbjct: 124 LKERLEAFNQTVTNNSKENTANKTEIKTTF-EEAMKRLHAEQELTIKAMREDQERAVKEL 182 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 ++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL +G +Y Q + ++ + Sbjct: 183 REQTERIGNDAASLTQALKGDSKMQGDWGEMILDKTLEDCGLIQGQQYFLQENYKDKDGN 242 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +PD ++ P + VIDAK++L AY+ ED RE L+EH++S++ H+ L K Sbjct: 243 NFRPDAVIVFPNEERAVIDAKVSLTAYQAAIREEDATERERYLKEHVSSIKKHVDELSAK 302 Query: 298 DYQQL-PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 +Y++L PG + +VLMF+P E + AL P ++ A + +I+++SP+ LL+AL+ Sbjct: 303 NYEKLVPG--CIGFVLMFVPYESGYSAALKTDPSILQYAYRKHIIILSPSNLLMALQLTH 360 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 +W+ ++N ++I ++++L+DK F + +G +D+ Q ++ +A +L+ G+GN Sbjct: 361 TMWQNFRMTKNVEEILHQSNELFDKFVTFAETFVKLGVDIDRLQQDFNRAKGQLNEGKGN 420 Query: 417 VLAQAEAFRGLGVEIKREINPDL 439 ++ + E + LG+ K++I L Sbjct: 421 IVRRLEGLKTLGISPKKQIPESL 443 >UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MSJ8_9BACT Length = 465 Score = 197 bits (502), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/385 (29%), Positives = 220/385 (57%), Gaps = 38/385 (9%) Query: 87 TTRMEAAQQHADDKIRQMINSE-----QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 T R+EA ++H ++++R + + + L E+ N+A ++ S +++ +++ L +L Sbjct: 84 TQRLEAERKH-NEELRNELQKQAEAKNKLLQEEVRNMAAQMLSESREKMNTADKERLEAL 142 Query: 142 LSPLREQLDGF--------------RRQVQDSFGKEAQERHTLTHE-------------I 174 L+PL+++L+ F + +++ +F +EA +R E + Sbjct: 143 LTPLKDRLEAFNQTVTNNSKETAANKTEIKTTF-EEAMKRLHAEQEMTIKAMREDQERTV 201 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 + L++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL + ++ Q + +++ Sbjct: 202 KELREQTERIGNDAASLTKALKGDSKMQGDWGEMILEKTLEDCGLIKDQQFFLQENYKDE 261 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 + +PD ++ LP + V+D+K++L AY+ D +E L+EH++SVR HI L Sbjct: 262 EGNNFRPDAVIELPNKERAVVDSKVSLTAYQSAIKETDPDEQERLLKEHVSSVRKHIDEL 321 Query: 295 GRKDYQQL-PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALR 353 K Y+++ PG + YVLMFIP E + AL P ++ A + +I+++SP+ LL+AL+ Sbjct: 322 SAKGYEKIVPG--CIGYVLMFIPYESGYSAALKTDPSILQYAYRKHIIVLSPSNLLMALQ 379 Query: 354 TIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 +W+ ++N +I +++ LYDK F + IG S++K Q ++ +A +L+ G Sbjct: 380 LTRTMWQNYRLNKNVDEILRQSNDLYDKFVTFGETFVKIGTSIEKLQSDFNKAKGQLNEG 439 Query: 414 RGNVLAQAEAFRGLGVEIKREINPD 438 +GN++ + E + LG+ K++I PD Sbjct: 440 KGNIIRRLEGMKTLGITPKKQI-PD 463 >UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W7V4_9BACT Length = 460 Score = 195 bits (495), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 111/368 (30%), Positives = 200/368 (54%), Gaps = 15/368 (4%) Query: 78 SLEADLREVTTRMEAAQ-QHADDKIRQMINSEQRLS---EQFENLANRIFEHSNRRVDEQ 133 +++ +L VTT++E+ Q H+ + + EQ+L EQF NLA RI E ++ R+ Sbjct: 69 TIKLELERVTTQLESEQASHSKETEMRREQFEQQLKTVQEQFSNLATRILEQTSERLKTT 128 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 N +S+ L PL+ ++ ++ +Q + + ++ +L+ ++R + ++ A LT Sbjct: 129 NNESMEHLTKPLKMNIEQLQQAIQHTNTETSKNTASLSQQLREMSLQTQKIESTATRLTN 188 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI---------ENDARSRMQPDVI 244 ++G NK QGNWGE +LT +LE+ G + G +Y+ Q ++ +D RM PDVI Sbjct: 189 VIRGGNKAQGNWGERILTDILESQGYKVGIDYDIQHTLTDEKGNAIKNDDTGRRMIPDVI 248 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL-- 302 + P +DV+ID+KM++ AY +Y N E++ ++ + ++S+R L +KDY + Sbjct: 249 LHYPNNEDVIIDSKMSIDAYYQYVNTEEEALKKKFAADLVSSIRTQATNLAKKDYSKYVH 308 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 + +D+V+MF+P E A LALD P++ EA + + S L+ LR I WR Sbjct: 309 SPRKAIDFVIMFVPNEGALQLALDTDPKIWGEAFDKQVFITSQQNLMAILRMIQIAWRQY 368 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q+ N +++ A +L ++ FI IG+ +D +Y + K +GR +++ +A Sbjct: 369 AQTENQKKVFALAEELLKRVGEFIKRFDKIGKDIDMLHKDYGETYNKAYTGRQSIVQKAN 428 Query: 423 AFRGLGVE 430 + LGV+ Sbjct: 429 ELKELGVK 436 >UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YX61_METPS Length = 520 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 118/396 (29%), Positives = 220/396 (55%), Gaps = 27/396 (6%) Query: 69 VRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR 128 ++ LQ+ NT + + + T +E ++ ++K+ + ++Q+LS+ F L+ +++N+ Sbjct: 113 IKDLQAQNTENQKQIEHLNTTLEKERKSTEEKLALLNEAQQKLSDAFNALSAEALKNNNQ 172 Query: 129 -----------------RVDEQNRQ-SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 +VD + RQ ++N +++PL+E LD ++Q+ + L Sbjct: 173 SFLDLAKTTLENYQNGAKVDLEVRQKAINDMVTPLKESLDKVDVKIQEMEKERVSAYTEL 232 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 +++ L Q + E NL +AL+ + +G WGE+ L RV+E SG+ +++ QV Sbjct: 233 KEQVKTLSQTELLLQSETSNLVKALRAPS-VRGQWGEIQLKRVVELSGMVNYCDFKEQVP 291 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 + N++ ++PD+I+ LP K++++D+K L AY A+DD + L +H + V+ H Sbjct: 292 LRNES-CNIRPDMIIYLPNRKNIIVDSKAPLYAYIDAIEAKDDDIKNEKLIDHASQVKKH 350 Query: 291 IRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 I L K Y QQ T ++V+MF+P E F AL++ P LI ++ N++L +PTTL+ Sbjct: 351 ITQLSDKSYWQQFND--TPEFVVMFLPGETFFSAALEKDPTLIEFGVERNVILATPTTLI 408 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 L+ +A WR E + NA++I + +LY+++ F D+MS +G+ L KA ++Y A+ Sbjct: 409 ALLKAVAYGWRQEQIAENAEEIKNLGKELYNRIITFNDNMSEVGKGLKKAVNSYNSAVGS 468 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREIN-PDLAEQAV 444 + S +L A F+ LG+ ++I+ P + EQ+V Sbjct: 469 MES---RLLVSARRFKELGISTDKDIDSPLILEQSV 501 >UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I000_9BACT Length = 419 Score = 187 bits (476), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 93/221 (42%), Positives = 149/221 (67%) Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 +LQ+ +L AD + T ++ +++ ++K+ ++ + + LS QF+NLA I E +++ Sbjct: 190 ALQASEATLRADFLSLQTLLDESKKSYEEKMALLVEARETLSAQFKNLATEILEEKSQKF 249 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 QN+++L SLL P+R +L F+ +V++ + KE ++R L ++ L +LN ++ EA N Sbjct: 250 SLQNQEALKSLLDPVRLKLGEFQSKVEEVYVKEGKDRSALHAQVNQLMELNRTLSDEAQN 309 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 LTRALKG KTQGNWGE++L +LE SGLR+G +YETQ S + SR QPDV++ LP+G Sbjct: 310 LTRALKGSGKTQGNWGELLLNNILEGSGLRKGSDYETQESHTREDGSRAQPDVVIHLPEG 369 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 + +VID+K++L AY Y A ++ R++AL+ HI SVR HI Sbjct: 370 RHLVIDSKVSLNAYVEYVGATEEAERQAALKRHIDSVRRHI 410 >UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadales RepID=Q2NCT1_ERYLH Length = 485 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 131/401 (32%), Positives = 204/401 (50%), Gaps = 47/401 (11%) Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL-- 118 E +++ R ++ +L+ E+T A A+ K R + S ++L ++FEN Sbjct: 79 ELATMSDRARRADALAETLDHTREELTALKAQAAGFAEQK-RLLEESREKLLKEFENTGA 137 Query: 119 -------------ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ-------D 158 AN F HS + E+ L +LL P+ E+L + QV+ D Sbjct: 138 QVLGKAQEAFLARANERFGHSEKASAEK----LAALLKPVDERLKKYEEQVETLENQRKD 193 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 +FG + H L I N+Q+ ++ +EA L +L K +G WGE L VLE G Sbjct: 194 AFG----QLHGL---IENMQRGQEEVRREAQRLGNSLTNAPKARGRWGERALQNVLEQCG 246 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRES 278 L E ++ + S++ ++ R++PD IV +P K +VIDAK++L AY+ F A+DD R+ Sbjct: 247 LAEHTDFHLEQSMDTES-GRLRPDAIVNVPGQKKLVIDAKVSLNAYQEAFEADDDDARKR 305 Query: 279 ALQEHIASVRNHIRLLGRKDYQ----QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 L H S+RNH++ LG K YQ + P DYV+MF+P E AL+ PEL Sbjct: 306 HLDLHAKSMRNHVQTLGSKGYQNQFEEAP-----DYVVMFVPGEHFVAAALEHDPELWDF 360 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A N ++L +PT L+ RT+A +WR + + AQ+I ++LYD++R+ + M +G Sbjct: 361 AFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRMGAELYDRLRVAGEHMKRVGG 420 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 L+ A NY K + S NVL G+EI +EI Sbjct: 421 GLETAVANYN---KFVGSFERNVLTSGRRMAEKGLEIGKEI 458 >UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8GYE2_CAUCN Length = 429 Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 123/352 (34%), Positives = 181/352 (51%), Gaps = 16/352 (4%) Query: 119 ANRIFEHSNRRVDEQNRQS-------LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 AN I E +R DE + L + L P+ E L F QV A+E L Sbjct: 75 ANAIAEQLIKRADENAKSRERLAEARLEAQLKPVAETLAKFEAQVTAVEKARAEETGGLK 134 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 +I L + + EA L+ AL+ QG WGE L VLEA+GL ++++ Q S+ Sbjct: 135 AQITALLEASTATQAEARKLSAALRRGAGVQGRWGEQTLRNVLEAAGLNSRFDFQEQFSV 194 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 +++ R +PDV V LP G VIDAK +L A+ +A D+ RE+A+ H SVR H+ Sbjct: 195 DSE-EGRRRPDVKVTLPGGGVFVIDAKCSLNAFLEAQDATDEVLREAAMARHAQSVRTHM 253 Query: 292 RLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 + L K Y Q G + D+V MF+P + ALDR PEL+ EA+ ++LV+PTTL Sbjct: 254 QGLSSKAYWDQFAGEGSPDFVAMFVPGDGFLAAALDRLPELMAEAMDRRVVLVTPTTLFA 313 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 + +A WR E Q++NA +I + +LY ++ + A+G++L+ A Y Q + L Sbjct: 314 LCKAVAYGWRAEDQAKNAARIVEVGRELYKRVSVMGAHAGAMGKALESAVGKYNQFVGSL 373 Query: 411 SSGRGNVLAQAEAFRGLGV--EIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 S VL QA F L V E K P + +QAV +L++V + P Sbjct: 374 ES---QVLTQARRFEDLSVDHEGKEIPEPPMVDQAVR--PLTKLKAVGQSPT 420 >UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAN1_CHIPD Length = 473 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 133/479 (27%), Positives = 248/479 (51%), Gaps = 35/479 (7%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQI-TQSEHWRAECE 63 ++++A+I+ A+G + + Q +A E ++ L + TQ + ++E Sbjct: 6 VIIFALISCA--ALGAVIKVVIRSNQLKTSIAVLETQLSALHETAGGLRTQVQDKQSEIG 63 Query: 64 LLNNEVRSLQS----INTSLEADLREVTTRMEAAQQ---HADDKIRQMINS-----EQRL 111 L+ ++ +Q I ++ EA RE R+ Q+ H+++K+++ NS + Sbjct: 64 QLHTRLQIMQEETIRIESNGEARYREAENRLREQQEFIDHSNEKLKEAFNSISAEALKHN 123 Query: 112 SEQFENLANRIFEH--SNRRVD-EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 + F LA + E ++ + D E+ +Q++++L+ PL E L F ++ Q+ Sbjct: 124 NASFVALAKSVLETQVTDAKGDLEKRQQAIDALVKPLNETLHRFDENMRQLESNRQQQYG 183 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 + I +QQ ++ +E NL ALK + +G +GE+ L RV+E +G+ E ++ Q Sbjct: 184 QINQFILGIQQSTEKLQKETHNLVSALKTSH-IRGRYGEIALRRVVEFAGMTEHCDFNEQ 242 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 VS+++D ++PD+I++LP+GK +++D+K+ L AY R F ED+ R+ L +H A+VR Sbjct: 243 VSVQSD-DGVLRPDMIIKLPEGKTIIVDSKVPLSAYMRAFETEDEEERKVFLNQHAAAVR 301 Query: 289 NHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 +H++ L K Y Q P DYV++++ +E +F AL P LI + ++N ++ + Sbjct: 302 DHLKKLSAKAYWSQWQHSP-----DYVILYMQIESSFGAALQADPTLIEDGIRNKVVFAT 356 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 PTTL+ LRT+ +W+ H + N + I +LY++ + + + IG SL ++Y Sbjct: 357 PTTLITLLRTVGFVWQQLHVAANIEDIRMAGIELYNRTNVLLRHFTNIGGSLKTVLNHYN 416 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA--EQAVSQDEEYRLRSVPEQPND 461 A+ L S + QA LG +K + PD+ E V + S+PE+ D Sbjct: 417 DAVASLES---RFVPQARKLYSLGPALKHPL-PDVKPIEAGVRYSALQQEESLPEEGED 471 >UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Zymomonas mobilis RepID=RMUC_ZYMMO Length = 448 Score = 176 bits (447), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 134/451 (29%), Positives = 227/451 (50%), Gaps = 46/451 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHA----QQKAEQLAEREEMVAELSAAKQQITQSE 56 + F ++ +I + G+ + W + A Q + + A+ EE + A +Q + E Sbjct: 5 LPFLAFLFGLI-IAGLPLLWYIRQQKTALDGLQARVLEGAKAEEQARRIPALEQAV---E 60 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 WR + LL E Q+ N E + RE R + I Q+ +E LS++F+ Sbjct: 61 SWREKASLLMAE----QAANKRGEEE-REKAYRQQ---------IEQLKATEDALSQKFD 106 Query: 117 NLANRIFEHSNRRVDEQ-----------NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 +LA + E ++ + EQ L LL P+++ L + V+++ Sbjct: 107 SLAAKTLEKAHGQFLEQAQMRFAKSEREGEAKLELLLQPVKDSLKRYEASVKEAEQLRQT 166 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 E +LT + +++ + EA L AL+ K +G WGE L VLE+ GL E ++ Sbjct: 167 EYGSLTALVSTMREGQEAVKNEANKLVNALRTAPKARGCWGEQQLRNVLESCGLSEYVDF 226 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 ET+VS+ N + R++PD I+R+P G +V+D+K++L AY+ ++A D+ R+ LQ H Sbjct: 227 ETEVSV-NSEKGRLRPDAIIRIPNGSILVVDSKVSLNAYQDAYDAVDEDKRQLYLQAHSK 285 Query: 286 SVRNHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 +++ HI L +K+Y ++ P DYV+MFIP E AL++ L A + ++ Sbjct: 286 AIKAHIDGLSQKNYWDQFKEAP-----DYVIMFIPGEHFLSAALEQDHNLWEYAFQKRVL 340 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 L +PT L+ RT+A +WR E + NA++I + +LY+++ M A+G SL+ + Sbjct: 341 LATPTNLIAIARTVAAVWRQEDIAHNARKIGELGKELYERIAKVDAHMRALGNSLENSVK 400 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK 432 NY K + S VL A FR L +E K Sbjct: 401 NYN---KFVGSFESRVLVTARKFRELNIETK 428 >UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJN2_FIBSS Length = 482 Score = 175 bits (444), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 133/476 (27%), Positives = 232/476 (48%), Gaps = 44/476 (9%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +I V + A++G+ IG LFA ++Q++A EM E++ + Q+ AE Sbjct: 1 MTIAVAIICAVLGIVIGVLFARNGNSQREAAARQANVEMEKEVAVLRSQLATETVKNAE- 59 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK----------------IRQMIN 106 L N + L+ + +A+ R R AA+ AD+K + Q Sbjct: 60 -LKENTEKQLEMVKA--DAEKRIADERAAAAKSLADEKEASAKRLESMKLDMERVHQSSL 116 Query: 107 SEQ---------RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 +EQ RL Q +N + + +++ E ++ L+SPL+E + + + Sbjct: 117 NEQNARFTEMSQRLYAQAKNSTEEMLKQREKQISESGHATMEQLVSPLKETIAKMEKTMN 176 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 D+ + + +L ++ N + A L RA K D+K QG+WGE VL VLE+ Sbjct: 177 DTTRAQTEANSSLKEVLKQSIDANDKTKNAANELVRAFKHDSKIQGDWGERVLEEVLESL 236 Query: 218 GLREGYEYETQVSIE----NDARSR-----MQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 GL EG ++ Q ++ N R+ ++PDVIV L K+VV+D+K+++ A+ Y Sbjct: 237 GLEEGKHFDVQATLRDANGNVVRAEGNNAMLRPDVIVHLDPYKEVVVDSKVSMAAFMDYM 296 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDYQ---QLPGLRTLDYVLMFIPVEPAFLLAL 325 AE+ R+ L++HI S+R H+ L KDY + P +T+D+V+MF+P A AL Sbjct: 297 QAENPDERKVLLKKHIESLRKHVNELSVKDYSSYVKAPK-KTMDFVVMFVPRAAALWTAL 355 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 L +A + N+ + +L LR + WR Q++N Q++ + A+++ ++ +F Sbjct: 356 AEDHALWRDAFEKNVYIADEQSLYAMLRMVKMTWRQVQQAQNQQKVFELANEVLKRVGIF 415 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV--EIKREINPDL 439 + +M IG +L KAQ+ Y + M KL +++ LG + K + PD+ Sbjct: 416 VKNMDEIGAALGKAQEAYNKGMAKLDDKGQSIVQSCRKLERLGAKQDSKNPLPPDV 471 >UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFB9_9RHOB Length = 495 Score = 174 bits (441), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 138/491 (28%), Positives = 241/491 (49%), Gaps = 53/491 (10%) Query: 9 AVIALVGVAIGWLFASYQHAQ----QKAEQLAEREEMVAELSAAKQQITQSEHWR----- 59 A + L GV++ L ++ A + +E AE E EL A+ ++ Q E R Sbjct: 14 ACLILGGVSVVLLRKAWGEADGLRTRLSEMQAELSEAQLELREAQTELRQIESLRVDLEK 73 Query: 60 -------AECELLNNEVRS--LQSINTSLEA----------DLREVTTRMEAAQQHADDK 100 AE EL + ++ +Q + LEA +LR + R+E + Sbjct: 74 TRTVRDQAERELASARTQADRVQGLEEQLEATRQAEQRASSELRALRERLEERDAAVKAE 133 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS-----------LNSLLSPLREQL 149 ++ Q + ++F+ LA+ + S++++ EQ +QS + SL+ P+RE+L Sbjct: 134 RERLTALSQEMQDRFKALADEALDVSSKKLLEQAQQSFKTQHEKAEGGVKSLVDPIRERL 193 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQ-LNAQMAQEAINLTRALKGDNKTQGNWGEV 208 D FR QV+ A+ + +I L Q LN Q +E L AL+ + T+G WGE Sbjct: 194 DKFREQVEKMEQDRARNSGAIAEQITKLSQGLNDQH-KETAKLVNALQRKSTTRGQWGER 252 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 + +LE +GL + +Y+ Q + + ++PD +++LP G V+D+K+ L AY Sbjct: 253 TVENILELAGLTKNIDYDAQHQTRDTDGAALRPDFVIKLPGGGRFVVDSKVALTAYLDAV 312 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDR 327 AED+ +R AL+ H V+ H++ L +K+Y + G +D+V +FIP E + A++ Sbjct: 313 EAEDEASRRDALRRHAQQVKTHVKQLAKKEYAASVDG--AIDFVALFIPGESFYSAAIEE 370 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 P L +A+K N+++ +P TLL + +A +R E +NAQ++A +L+ ++ F D Sbjct: 371 DPALFDDAIKANVIITTPATLLALAKAVAYGFRQEKLEQNAQKVAALGDELFTRLNTFSD 430 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + +G L A NY +A+ S VL +A L ++K+ +P D Sbjct: 431 HLGRVGAGLKSATANYNKAVGSFDS---RVLPKARDMAQLNGQMKQIESP------AQVD 481 Query: 448 EEYRLRSVPEQ 458 E RL + P++ Sbjct: 482 EAPRLLTGPDE 492 >UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GRF8_SPHAL Length = 451 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 146/464 (31%), Positives = 234/464 (50%), Gaps = 58/464 (12%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL 79 WLFA A+Q +AER+ + +E +R+ L E + Q+ + L Sbjct: 21 WLFA----ARQSGALMAERDGL-------------AERFRSAVTDLAAETEARQAADIRL 63 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIF-----------EHSNR 128 A LR EAA HA ++RQ+ +++ L+ QF + + E R Sbjct: 64 AA-LRAEQEAREAA--HAA-QVRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFR 119 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQV-------QDSFGKEAQERHTLTHEIRNLQQLN 181 + +E Q L +LL P+ E+L+ + V Q +FG L +I +++ + Sbjct: 120 QSEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFG-------MLQGQIESMRAQS 172 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 +++ EA L AL+ K +G WGE L VLE+ GL E +++T+VS+ + R++P Sbjct: 173 ERVSSEAAKLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRP 232 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-Q 300 DV+V++P G+ +VIDAK++L AY+ F A D+ + + L H A+++ H+ LG K Y Sbjct: 233 DVVVKVPGGQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWN 292 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 Q T D+V+MF+P E ALD EL A + ++L +PT L+ RT+A +WR Sbjct: 293 QFD--DTPDFVVMFVPGEHFLAAALDHDHELWDYAFERKVLLATPTNLIAIARTVAAVWR 350 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 E + A++IA +LY +M + ++ +G++LD+A Y + S VL Q Sbjct: 351 QEKLANQAREIAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSFES---QVLTQ 407 Query: 421 AEAFRGLGVEI-KREINPDL--AEQAVSQDEEYRLRSVPEQPND 461 A+ F L +E REI P L AEQA +L + P ND Sbjct: 408 AKRFEALDIETGGREI-PTLPVAEQAAR--PLAKLAAAPSAVND 448 >UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID=B6BEX3_9RHOB Length = 458 Score = 171 bits (433), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 101/321 (31%), Positives = 174/321 (54%), Gaps = 9/321 (2%) Query: 112 SEQFENLANRIFEHSNRRVDE---QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 SE F +L + F+ + D + ++ SL+ PL +L F ++++ + Sbjct: 118 SESFLSLVSERFQAHCKTADADLAKRHAAIESLVKPLDHKLGQFGERIKEIEQARNEAYG 177 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 + ++++L + A + E L +AL+ KT+G WGE+ L +V E +G+ E +YE + Sbjct: 178 AIQAQVKHLAEGQAMLGGETRKLVQALRAP-KTRGRWGEMQLRQVFEMAGMTEHVDYELE 236 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 S+ D R +PD +VR+P GK +V+DAK L AY A+ +++AL H V+ Sbjct: 237 KSVGTDDGLR-RPDAVVRIPGGKSIVVDAKTPLEAYLDALEADTPEQQQAALARHANHVK 295 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 H+R L K YQ T D+V+MFIP E A + P LI A +N +++ +PTTL Sbjct: 296 THVRQLSSKSYQSTLA-ETPDFVVMFIPGETFVSAAAEADPGLIEYAFENKVLIATPTTL 354 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + +++IA W+ E + NA ++ A +LYD++ F +++++G+SL + +NY +A+ Sbjct: 355 MALVKSIAYGWQQEKMAENAVEVQKTAKELYDRLATFSKNLASVGRSLSSSVNNYNKAVG 414 Query: 409 KLSSGRGNVLAQAEAFRGLGV 429 L + VL A F +GV Sbjct: 415 SLEA---RVLPSARRFEAMGV 432 >UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A093_DESOH Length = 456 Score = 169 bits (428), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 115/343 (33%), Positives = 181/343 (52%), Gaps = 17/343 (4%) Query: 112 SEQFENLANRIFE--HSNRRVDEQNRQ-SLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 SEQF +LA FE H D RQ ++ ++ P++E LD QV + Q Sbjct: 108 SEQFLHLAKSAFESFHVKASGDLAQRQKAVEEIVRPVKEALDKVNTQVAEVEKSRKQAYG 167 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 +LT + +L + +++ E NL AL+ +G WGE+ L RV+E +G+ ++ Q Sbjct: 168 SLTATVESLLRGQKELSTETGNLVSALR-KPMVRGRWGEIQLRRVVEFAGMLPHCDFVEQ 226 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 S++ + + ++PD++VRLP GK VV+D+K L AY +AED+ TR+ + +H +R Sbjct: 227 SSVKTETGT-LRPDMLVRLPGGKLVVVDSKAPLEAYLSAVSAEDEATRKKFMADHTRHLR 285 Query: 289 NHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 HI+ L K Y Q P D+V++F+P EP F AL++ LI A+ I+L S Sbjct: 286 THIQQLSDKAYWEQFDQAP-----DFVVLFLPGEPFFSAALEQDEGLIEFAVARRIILAS 340 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 PTTL+ L+ ++ W+ E + NA+ I + + LY ++ D +G+SLD+A +Y Sbjct: 341 PTTLITLLQAVSYGWQQEQIAENARHIQELGADLYRRISKMADHFGTVGKSLDRAVKSYN 400 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 A+ L + VL A F L IK EI VS+D Sbjct: 401 DAVGSLEA---RVLPAARRFSELDTSIKNEIPKIEPVNVVSRD 440 >UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RPQ7_CAMFF Length = 435 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/354 (28%), Positives = 176/354 (49%), Gaps = 14/354 (3%) Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL 149 ++A Q D K R+ E + E ++L N + + + E +++ L +L++PL+ ++ Sbjct: 91 LKARQDELDLKTREYF--ELKTKEMSQHLLNL----NTKSLGENSQKILENLINPLKNEI 144 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 + ++++ ++ NL+ + +A NL AL G+ K GNWGE+ Sbjct: 145 EKYQKESVNT-------STIFKANFENLKTETKNIISQAKNLADALNGNKKVLGNWGEIQ 197 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 L VLEASGL G Y QV ++ ++ DV+V + K +ID+K +LV Y YFN Sbjct: 198 LDSVLEASGLINGKNYFKQVGYKDKDGNQKYLDVVVDFGESKKAIIDSKCSLVNYNAYFN 257 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 A+ D + + ++ HI LL K+YQ +T +Y+ MF+P + F AL++ Sbjct: 258 AQSDEQKNQFAKALAGDIKKHIELLSSKEYQDYDT-KTYEYIFMFVPNDSIFYTALNQDS 316 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 + A + I + +P TLL+AL+T+ WR NA +I A ++YDK R+F + Sbjct: 317 TIYEYAYEKGIFITTPLTLLMALKTVYICWRNLKSDENAMRILSEAGRMYDKFRVFTEQF 376 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 + L+ + L G GN+L++ E + LG + + I+ E A Sbjct: 377 DKLESQLNTVIKTVSSSKTTLYDGSGNLLSRFENLKKLGAKTNKNISKIYNESA 430 >UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVZ2_HALNC Length = 531 Score = 169 bits (427), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 115/338 (34%), Positives = 185/338 (54%), Gaps = 14/338 (4%) Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 N+E L ENLA F+ + + ++++ + P+RE+L+ F ++ Sbjct: 176 NNESFLKLAEENLAR--FQAGAAQDLNKRQEAIVQMTQPIRERLEQFDVKLNSLEQARTN 233 Query: 166 ERHTLTHEIRNLQQLN-AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + +I +L Q++ ++ +E +L RAL+ +T+G WGEV L RV+E +G+ E + Sbjct: 234 AYGAMNQQINDLLQIHLPKLHRETADLVRALR-QPQTRGRWGEVQLKRVVELAGMLEHCD 292 Query: 225 YETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHI 284 +E QVS ++D R++PD+IV LP G+ VV+DAK L AY + A D R +ALQ+H Sbjct: 293 FEEQVS-QSDTGGRLRPDMIVHLPGGRQVVVDAKAPLNAYLQAMEAPSDEARAAALQDHA 351 Query: 285 ASVRNHIRLLGRKDY--QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 VR HI L +K+Y Q P T ++V++F+P E F AL + P LI + ++ Sbjct: 352 RQVRTHISQLSKKEYFDQFSP---TPEFVVLFVPGEVFFSAALMQDPTLIEFGAEKRVIP 408 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 SPTTL+ L+ ++ WR E ++NAQ++A+ LY++M +G+ LD+A Sbjct: 409 ASPTTLIALLKAVSYGWRQEALAKNAQEMAELGRDLYERMGTLAQHWQKVGKHLDQAVGA 468 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLG-VEIKREINPDL 439 + Q++ L G VL A FR LG V +E P L Sbjct: 469 FNQSVGSLE---GRVLPTARKFRELGAVRSDKEDLPSL 503 >UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C4V2_HYPNA Length = 445 Score = 168 bits (425), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 120/437 (27%), Positives = 217/437 (49%), Gaps = 36/437 (8%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 M++ + L+ V +G +Q Q A ER+ ++AE A+ Sbjct: 14 MIHVGLLLIAVGLGIYL--WQARQGGA---LERQRLLAERDGAQ---------------- 52 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIF-- 123 +EV L+ +L+A R+ ++ AA+ + + R+ L++ AN +F Sbjct: 53 -DEVARLRQREQTLDAVARDAQLKLAAAEARSAEDERKF----GELAQGVLARANTMFLE 107 Query: 124 --EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 E + +R E + L L+ P+ E + FR++V+ +++ L+ +++ + + Sbjct: 108 RAEETFKRHREGAQGELKELMKPIGENFETFRQKVEALEKVRIEDKSLLSEQVKAIGESL 167 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 + E L AL K G WGE+ L V+E +GL ++ QV ++ R +P Sbjct: 168 HRNTAETGKLVNALTAP-KGGGRWGEMTLRNVMEQAGLSAHCDFSEQVH-DDTEEGRQRP 225 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D I+RLP + +VID+K++L +Y N +D R + L++H SV+ H+ L KDYQ Sbjct: 226 DAIIRLPGDRQIVIDSKVSLASYMAATNTDDPAERLAHLKQHATSVQRHVTTLASKDYQS 285 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 G R DY+ MFIP E F AL++ P+LI +A+ ++++ +PTTL+ RT+A+LWR Sbjct: 286 NLGNR-FDYIAMFIPGENFFAAALEQAPDLIEKAMSRSVIVTTPTTLIALARTVAHLWRQ 344 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 + NAQ A+ ++LY +M + + +G+S++ + D+Y + L VL Sbjct: 345 HEMNENAQAAAELGAELYTRMGVLLGHTEKLGKSINSSVDHYNSLLGSLDK---RVLPTL 401 Query: 422 EAFRGLGVEIKREINPD 438 F + + ++ P+ Sbjct: 402 RKFEDMKIAPPGKVPPE 418 >UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRU2_ACIBL Length = 459 Score = 167 bits (424), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 133/460 (28%), Positives = 220/460 (47%), Gaps = 59/460 (12%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAE-QLAEREEMVAELSAAKQQITQSEHWR 59 M I +V A+V AI + Q A A +AERE + A + AA + S+ Sbjct: 1 MGSLIFAASVSAVVAFAITYFALRSQSAAAVARLSVAERELVTARMEAANKSSQASQ--- 57 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 L+ E+ L++ ++A ++ AD+K+ ++ + + QFE LA Sbjct: 58 -----LDRELAGLRAT--------------LDAEKKAADEKLAAVLQARDDMKAQFEALA 98 Query: 120 NRIFEHSNRR---------VDEQNR---------QSLNSLLSPLREQLDGFRRQVQDSFG 161 + ++R D QN+ Q++ +L+ P+ E L F Q+Q Sbjct: 99 ASTLQANSRSFLDLAQTKLTDFQNQAKGDLNERQQAIENLVKPIHESLTKFDGQIQQIEK 158 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL-- 219 + +L ++++ L Q N Q+ + L AL+ + +G WGE+ L RV E +G+ Sbjct: 159 SRNEAYGSLLNQLQTLTQSNDQLRVQTGALVTALRAP-QGRGRWGEIQLRRVAEMAGMIN 217 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 R + + +S E+ ++PD++V+LP GK VV+DAK L AY A D R Sbjct: 218 RCDFLEQEHLSTEDGG---LRPDMVVKLPGGKTVVVDAKTPLAAYLSALEATSDTERAEF 274 Query: 280 LQEHIASVRNHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA 335 L++H A VR HI+ LG K Y + P + V+MF+P E F AL P LI Sbjct: 275 LRQHAAQVRVHIKKLGAKSYWEQFENAP-----EMVVMFLPNEAFFSAALAEDPTLIEAG 329 Query: 336 LKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQS 395 + + +++ SPTTL+ LR + W+ + +RNA +++ LY+++ + +G Sbjct: 330 VADKVIIASPTTLIALLRAVHYGWQQQEIARNAVEVSQLGKDLYERLCTMVGYFEDVGGK 389 Query: 396 LDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 LD A Y +A+ L S VL++A F L ++IK EI Sbjct: 390 LDGAVKAYNKAVSSLES---RVLSKARKFPDLAIQIKEEI 426 >UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IPI4_RHOCS Length = 524 Score = 166 bits (420), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/372 (30%), Positives = 191/372 (51%), Gaps = 36/372 (9%) Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR-----------VDEQNR---- 135 EA +Q ++ + +E R E F+ L++ +N+R V E R Sbjct: 121 EALRQRLEENRTLLSGAEARFRETFQALSHEALSANNQRFLELAQAQLEKVQESARGDLD 180 Query: 136 ---QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 Q++ L+ P+RE+LD F + A L ++ +L + Q+ E NL Sbjct: 181 RRQQAIGELVGPVREKLDKFDSAIHQLEQARAGAYAELKTQVASLIETQGQLRSETANLV 240 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA-RSRMQPDVIVRLPQGK 251 RAL+ T+G WGE+ L RV+E +G+ + ++ QVS +DA + R++PD++VRLP GK Sbjct: 241 RALR-SPATRGRWGEIQLRRVVEMAGMLDHCDFHEQVS--HDAEQGRLRPDLLVRLPGGK 297 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY--QQLPGLRTLD 309 +V+DAK L A+ DD R + + H +R+H++ LG K Y Q P + Sbjct: 298 TIVVDAKAPLEAFLDAVGTTDDAMRAAHMARHARHIRDHMKALGEKRYWSQFEP---APE 354 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V++F+P E F AL++ P LI + +++ +PTTL+ LR ++ WR E + NA+ Sbjct: 355 FVVLFLPGENFFSAALEQDPALIEAGIDQSVIPATPTTLIALLRAVSYGWRQEKLAHNAR 414 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +I+ ++YD++ + + M +G+ L A + Y +A+ L S VL A F+ L Sbjct: 415 EISVLGREMYDRLGVMAEHMQRLGKGLGGAVECYNKAVSSLES---RVLVTARRFKEL-- 469 Query: 430 EIKREINPDLAE 441 + PD AE Sbjct: 470 ----KATPDNAE 477 >UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Tax=Bacteria RepID=B7JBD7_ACIF2 Length = 486 Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 114/384 (29%), Positives = 193/384 (50%), Gaps = 43/384 (11%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR--- 128 LQ+ N+++ L E+ R+E + +K+ + ++ QRL + F++L+ +N+ Sbjct: 78 LQTENSAIRGQLAELGERLEQERLRGTEKLALLEDARQRLGDAFQSLSAEALRRNNQSFL 137 Query: 129 --------------RVDEQNRQ-SLNSLLSPLREQL-------DGFRRQVQDSFGKEAQE 166 + D + RQ ++ L+ P+RE L D + D++G Sbjct: 138 ELARENLERFQESAKTDWEGRQKAVGQLVEPIRESLEKVGTRIDAMEKTRIDAYG----- 192 Query: 167 RHTLTHEIRNLQQLN-AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 L +IR L Q + ++ QE L +AL+ +G WGE+ L RV+E +G+ ++ Sbjct: 193 --ALNEQIRGLVQDHLPRLHQETAALVKALR-QPAARGRWGEMQLKRVVEMAGMLAYCDF 249 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 Q + D+ + +PD++VRLP GK +V+DAK L AY +D+ R L +H + Sbjct: 250 TEQEGVNTDS-GQQRPDLLVRLPGGKRIVVDAKAPLSAYLEAMETDDEQKRAHFLHKHAS 308 Query: 286 SVRNHIRLLGRKDY--QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 +R H+ L +K Y Q P T ++V++F+P E F AL P LI ++ +++ Sbjct: 309 ELRTHMTQLSKKSYWEQFQP---TPEFVVLFVPGEVFFSAALQEDPSLIEYGVEQKVIVA 365 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTTL+ LR +A WR E + NA+ I+D +LYD++ + + +G+ L +A + Y Sbjct: 366 SPTTLIALLRAVAYGWRQESLAENARAISDLGKELYDRISILAGHWARVGKGLGQAVEAY 425 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGL 427 A L S VL A FR L Sbjct: 426 NSATGSLES---RVLVSARKFRDL 446 >UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQ43_HIRBI Length = 516 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 121/418 (28%), Positives = 212/418 (50%), Gaps = 26/418 (6%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE-------ADLRE 85 E+L + + A+ A+Q TQ E +R E L+ ++ L++ E A ++ Sbjct: 84 EKLRFEQSLNAQQEKAEQYQTQLEKYRTHAEALSRKLAGLEAGQEEREKAFEVERATMKS 143 Query: 86 VTTRMEAAQQH-ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 + + QH AD+ +RQ +QF +AN R+ E ++ L+S++ P Sbjct: 144 LNAEIHQKFQHLADNALRQS-------QKQFLEIAN----EQMRQHKEVSKADLSSMIGP 192 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 ++E F ++V++ +++R +L EI L Q A L AL K+ G Sbjct: 193 IKESFSQFSKKVENLEQVRSEDRASLRTEIEKLSQTMADTQNVTGKLANALSAP-KSGGR 251 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE L VLE +GL E ++ QV + ++PDV+VR+P G+ +VID+K+++ + Sbjct: 252 WGEETLRNVLEMAGLSEHADFSEQVHANVEDGQNIRPDVVVRMPGGRHLVIDSKVSVDDF 311 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLL 323 + D + LQ H +++H+ +L RK Y QLP T+D+V MF+P E + Sbjct: 312 LQASEESDPQRQNLLLQTHARKMKDHVTVLARKAYWAQLPD--TVDFVAMFVPGENFYAA 369 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 AL +L A +N +++V+P+TL+ + +A WR E+ ++N +++ + A +LY ++ Sbjct: 370 ALSADRDLFDYAARNKVIIVTPSTLVALAKAVAFGWRQENAAQNTKEVTELARELYSRIA 429 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + D + +G+ L+ A Y + + L + VL QA F LGV + PDL E Sbjct: 430 VMGDKVVKMGRGLNTASAAYNELVGTLET---KVLPQARKFDALGVSADGKEIPDLEE 484 >UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LW22_ACIC1 Length = 448 Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 125/399 (31%), Positives = 211/399 (52%), Gaps = 29/399 (7%) Query: 79 LEADLREVTTRMEAAQQHADDKIRQM---INSE--QRLSEQFENLANRIFEHSNRRVD-- 131 +EA+ R ++E+A+ +++R+M ++SE R S F +LA + + Sbjct: 57 VEAERRAAAQQIESARL-TQEQLREMFAALSSEALHRNSRAFVDLATETLKQITTAAEGD 115 Query: 132 -EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 + +Q++ +LL+PLRE L +Q++ + A L ++ ++ + + Q+ E Sbjct: 116 LAKRQQAIEALLAPLRESLAKVEQQIEQVEKERADAYGALRQQVESMGKTSEQLRLETQQ 175 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L +AL+ + +G WGE L RV+E +G+ E ++ Q + + + +R++PD+IVRLP G Sbjct: 176 LVQALRAP-QARGAWGEYQLRRVVEFAGMLEHCDFVEQATTDAE-DARLRPDMIVRLPGG 233 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLD 309 K VV+DAK+ LV + A D TR+ ++ H +R HI L K Y +P T + Sbjct: 234 KHVVVDAKVPLVGFLDAMAASDPATRDEHVRRHARHLRQHIDHLASKAYWAAVPN--TPE 291 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V++F+P E AL+ P+L+ A++ N+++ +PTTL++ LRT+A WR E + NAQ Sbjct: 292 FVVLFVPAEAFLSAALETDPDLLQYAMERNVIVATPTTLVLMLRTVAYTWRQEALAANAQ 351 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 Q+ D A LY ++ ++ +G+ L A +Y A+ L S VL A L V Sbjct: 352 QVLDLARSLYSRLATLGGHVNKLGERLGSAVRSYNDAVASLES---RVLVTARRLADLKV 408 Query: 430 -----EIKR--EINP---DLAEQAVSQDEEYRLRSVPEQ 458 E R E+ P AE S DE L S+PE+ Sbjct: 409 TADDLESPRQVEVTPRRVQAAELVASADET--LVSLPER 445 >UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BYP8_XYLCX Length = 494 Score = 160 bits (406), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 103/349 (29%), Positives = 185/349 (53%), Gaps = 15/349 (4%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE-QRLSEQFENLANRIFEHSNR 128 R L + EA LRE+ EA +Q + R + Q S+QF +LA + + S Sbjct: 81 RRLAEARSEAEARLRELKVDQEAEKQ----RFRTIAGEALQANSQQFLDLAAQTLKASTV 136 Query: 129 RVDE---QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + +E Q Q++ +L+ PL + L+ R +V + + TLT +R L N++++ Sbjct: 137 KNEEALVQREQAIKALVEPLSKSLEQVRTEVAQAEKSRIEGHSTLTEHLRQLSVANSELS 196 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 + +L AL+ ++T+G WGE+ L RV+EA+G+ +++ Q S+ D + ++PD++V Sbjct: 197 KGTGDLVTALRS-SQTRGAWGELQLRRVVEAAGMLRNVDFDEQASVSTDDGT-LRPDMVV 254 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY--QQLP 303 RL GK+VV+D+K+ + Y +D RE+ L H+ +R H+ L K+Y Q P Sbjct: 255 RLAGGKNVVVDSKVAFLGYLEAQQTDDADYREARLDAHVRHLRKHVDDLAGKEYWEQFSP 314 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 ++V+MF+P E A++R P L+ A + N+++ +P T+L L+T+A WR E Sbjct: 315 AP---EFVVMFVPAEAFLSAAVERDPGLMEYAARQNVIIATPMTMLALLKTVAYAWRQEA 371 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 + NAQ++ +LY ++ ++ G ++ +Y + L S Sbjct: 372 LAENAQKVLTVGKELYSRLVTMTGHITKTGNAIASVTKHYNSMIGSLES 420 >UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinomycetales RepID=D1A8I3_THECD Length = 501 Score = 158 bits (399), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 111/363 (30%), Positives = 186/363 (51%), Gaps = 28/363 (7%) Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV---------------- 130 TTR A Q+ EQRLSE FE+L+ + + SNRR Sbjct: 25 TTRQAVLVARAKAAEEQLSRLEQRLSEHFESLSAKALDASNRRFLELADARLRAAGAEAA 84 Query: 131 --DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 E+ +Q++ L++PLRE L+ Q+++ + L ++ +++ + ++ E Sbjct: 85 GELERRKQAVEHLVAPLRETLEKVAEQLREVETGRRESHAMLAKQVEFVRRSSEELRAET 144 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 L RAL+ + +G WGE+ L RV+E +G+ +++ QV+ D + ++PD++VRL Sbjct: 145 QALARALQ-RPEARGRWGELQLRRVVELAGMMRHCDFDEQVTGHGDDGA-LRPDLVVRLV 202 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL--PGLR 306 GK +V+DAK+ L AY +D R + LQ H +R+H+ L K Y + P Sbjct: 203 GGKTIVVDAKVPLSAYLEAAATDDPKLRTARLQAHARQLRDHVDHLASKAYWRAFSP--- 259 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 ++V++FIP E AL+ PEL+ AL + + +PTTL+ LRT+A W+ E SR Sbjct: 260 APEFVVLFIPGEAFLAPALEHSPELLEYALSRRVHIATPTTLVSMLRTVAYAWQQEALSR 319 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 NA+ + + +LY+++ + +G+SL A +Y +A+ L S VL A Sbjct: 320 NARTVFELGRQLYERLGTLGGHIDELGRSLSGAVRSYNRAVGSLES---RVLVSARRMNE 376 Query: 427 LGV 429 LG+ Sbjct: 377 LGL 379 >UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULX8_AKKM8 Length = 417 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 114/399 (28%), Positives = 203/399 (50%), Gaps = 51/399 (12%) Query: 84 REVTTRMEAA----QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR--------RVD 131 R+ + R+EA Q+ A+D+ + + +E+ L + F ++ + +S + R+ Sbjct: 29 RDRSVRLEAESRSWQERAEDRTQMLRRAEEVLKDSFAGISAEVLRNSEKQFLNLAETRLQ 88 Query: 132 EQN----------RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER----HTLTHEIRNL 177 Q +Q++ S+L P+ E L + VQ G+ +ER L +IR + Sbjct: 89 SQRQQANHDLDSRKQAIESMLKPVSESL----KLVQSRLGEMEKERVGAYTDLKTQIRYI 144 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 N + E L++AL N +G WGE+ L RV+E +G+ E ++ TQ E +R Sbjct: 145 LSGNEALKNETARLSQALH-HNSVRGQWGELQLRRVVELAGMVEYCDFTTQ---ETRSRE 200 Query: 238 --RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 R++PD+++ LP G+ ++IDAK + +Y E+ R + H A V+ H++ L Sbjct: 201 EERVRPDMVIHLPGGRSIIIDAKAPMASYLNAGQTENPEERSQWMARHAADVKRHLQQLS 260 Query: 296 RKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 K+Y Q P ++V+MF+P E F AL+ P LI +N ++L +P+TL+ Sbjct: 261 AKNYFAQFSQCP-----EFVIMFLPGESFFQAALEADPSLIEFGAENKVILSTPSTLIAL 315 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L+ +A W+ E + NA++I++ + LY+ + S++G+SL++A Y K +S Sbjct: 316 LKAVAYGWKQEQLADNAKKISEAGADLYNTCSILSGHFSSLGKSLNQAVAQYN---KTVS 372 Query: 412 SGRGNVLAQAEAFRGLGVEIKREIN---PDLAEQAVSQD 447 S + +A+ + LGV +E+ D+ EQA S D Sbjct: 373 SFEHRFIPRAQKLKNLGVTSTKELPRSLEDITEQAKSAD 411 >UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZS87_OPITP Length = 462 Score = 157 bits (398), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 126/452 (27%), Positives = 212/452 (46%), Gaps = 72/452 (15%) Query: 20 WLFASYQHAQQKAEQLAEREE---MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 WL +HA + A EE + EL+A + ++ Q L S+N Sbjct: 43 WLLLVARHAPVRERLRAASEENQRLATELAAVRAELAQ-----------------LSSLN 85 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE---- 132 T L +T++ A + A +K+ +I++ RL+ +F+ L+ +N E Sbjct: 86 TQL-------STQLAAERASATEKLATLIDAHTRLTNEFKALSADALSRNNTSFLELARE 138 Query: 133 --------------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH----TLTHEI 174 Q +Q++ +L+ PL+E L +QV G R +LT ++ Sbjct: 139 TFAKLQQQSVGELAQRQQAITALVQPLKESL----QQVDAKIGAIENARKEAYGSLTEQL 194 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 R+L Q+ EA L+ AL+ G+WGE+ L RV+E + + ++ E + Sbjct: 195 RSLNTAQLQLQSEASRLSTALRSTTYA-GSWGELQLRRVVEMADMLGYCDF-----CEQE 248 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 ++ D++VRLP G+ +V+DAK L ++ A D+ R + L EH VRNHI L Sbjct: 249 TSGSLRADLVVRLPGGQRIVVDAKTPLESFRAASEATDENVRAARLAEHAQKVRNHIDAL 308 Query: 295 GRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 G K+Y Q P ++V++F+P + AL L+ A+ ++L +P+TL+ Sbjct: 309 GAKNYWEQFQPAP-----EFVVLFLPGDQFLGAALHADSSLMDRAIAKRVLLATPSTLIA 363 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L+ A WR E S+NA++I+ +LYD+M F + + IG+ LD A Y A+ Sbjct: 364 LLKAAAYGWRQESISQNAEEISLLGRQLYDRMVTFAEHLDKIGRGLDNALKGYNSAVGSF 423 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREIN-PDLAE 441 S +V+ A F LG +E++ P + E Sbjct: 424 ES---SVMPGARRFAELGARGAKELSTPAVVE 452 >UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRQ8_THISH Length = 417 Score = 155 bits (392), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 101/325 (31%), Positives = 174/325 (53%), Gaps = 33/325 (10%) Query: 133 QNRQSLNSLLSPLREQLDGFRRQV-------QDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 Q +S L+ P+RE L+ Q+ + +FG +LT +R + + ++ Sbjct: 100 QKEKSFEGLVKPIRETLEKTEAQIRAMEQARESAFG-------SLTQHLRIMAEGQQRLQ 152 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV--SIENDARSRMQPDV 243 E NL RAL +G WGE+ L R+ E +G+ E +++ Q + E+ A M+PD+ Sbjct: 153 NETHNLARALSRPT-VRGQWGEMTLKRLAELAGMVEHCDFQEQTHRATEDGA---MRPDM 208 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY---- 299 IVR+P +++V+DAK L AY +A DD RE L+ H +R +R L K Y Sbjct: 209 IVRMPDARELVVDAKTPLDAYLAAVDAPDDKHREQHLKTHARKLRERMRELSSKAYWTQF 268 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 ++ P D+V++FIP + AL+ P L+ +AL N ++L +P++L+ LR +A W Sbjct: 269 KESP-----DFVILFIPGDQFLSAALEHDPALLEDALSNRVILATPSSLVALLRAVAYGW 323 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R + + NA++I + +LY ++ F + + IG+SL + D+Y +A+ L +V+ Sbjct: 324 RQQAVAENAEKIRELGEELYKRLATFTEHLGRIGKSLGSSVDHYNKAVGSLER---SVMP 380 Query: 420 QAEAFRGLGVEIKREI-NPDLAEQA 443 A F LG++ ++++ P EQA Sbjct: 381 GARRFAELGIQARKQMEEPVPLEQA 405 >UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGB7_KOSOT Length = 439 Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 109/402 (27%), Positives = 201/402 (50%), Gaps = 35/402 (8%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 ++ EL ++ ++ EH+R E + L E+ SL++ N L+ + + E + DD Sbjct: 26 KLYKELKKNIEEKSKFEHYREENQNLLKEIDSLRAENEHLKIE----KAKYEKDIESLDD 81 Query: 100 KIRQMINSEQRLSEQFENLANRI--------FEHSNRR----VDEQNRQSLNSLLSPLRE 147 K+ + +++ L + F+ LA+ + +N + +D Q + L LL PL+ Sbjct: 82 KLSWLEKAKEELEKNFKALASDVALKNTESFLNQANDKLKGLIDNQ-KTELEKLLDPLKN 140 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 LD + +++ K + L + L +++ ++ LT +LK +G WGE Sbjct: 141 NLDTLQNNIREIESKREKAYGGLEKRLEELSRVHNELQTGITKLTSSLKSTT-ARGRWGE 199 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 L R++E +G+ ++E Q E +PD+I++LP G + +DAK L AY Sbjct: 200 FQLKRIVELAGMTAHIDFEEQEVTEAG-----RPDMIIKLPNGGVIPVDAKAPLNAYLEA 254 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLL 323 + D ++ L EHI ++R I LG K Y QQ P D+V+MF+P+E A Sbjct: 255 MECQSDEEKKKKLNEHIKNLRKTITNLGSKAYWEQFQQSP-----DFVIMFVPLEAAVSA 309 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A + P L+ +A+K +++ +P TLL L+++A W+ + NA++IA+ +LY ++ Sbjct: 310 AFEMDPTLLEDAVKRKVLITTPITLLALLKSVAYGWQQFQLTENAKKIAEEGKELYKRLS 369 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 F++D+ +G+ L Y A+ L + +L +A F+ Sbjct: 370 KFLNDVDTVGKRLKSLVQAYNTAVGSLET---RLLPRARKFK 408 >UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=uncultured bacterium RepID=A5H239_9BACT Length = 404 Score = 154 bits (390), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 121/421 (28%), Positives = 211/421 (50%), Gaps = 33/421 (7%) Query: 1 MDFSIMVYAVIALV-GVAIGWLFASYQ-HAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M+ M+ AL+ G+ G+L AS + HA AE E SAA+ Sbjct: 1 MNLPAMLLTAGALLFGLLAGYLLASMRFHA-------AETGRAALEGSAAE--------L 45 Query: 59 RAECELLNNEVRSLQS-------INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRL 111 R + E+L + ++ QS + + E L++V + +Q D +M + + L Sbjct: 46 RNQVEILRSSLQEQQSRLEKEKELRAAAETSLQKVEENLAEQRQALDQAKAEMKDVFRSL 105 Query: 112 -SEQFENLANRIFEHSNRRVD---EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 SE + E S ++ E + ++ L+ PL E+L + Q Sbjct: 106 ASEALSATTQQFIELSQAHLEGELEPRKIAIEGLVHPLAERLKDLESHLSQLESARQQAY 165 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L ++R L + + QE LT AL+ + +G+WGE+ L R +E +G+ ++E Sbjct: 166 GELISQVRQLSDVGRDLRQETGTLTSALR-HPRVRGSWGELTLRRAVELAGMSPHCDFEE 224 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q ++ + R++PD+IV +P +D+V+DAK+ L A+ + ++ + R+ A++ H V Sbjct: 225 QGTLTAE-DGRLRPDLIVHMPGNRDIVVDAKVPLSAFLKASESDTEAQRQEAMRSHARLV 283 Query: 288 RNHIRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 R HI+ LG K Y +LPG + V++F+P E F AL+ LI +AL+ ++L SPT Sbjct: 284 REHIQQLGSKAYWNELPG--NPELVILFMPGESFFSAALECDRTLIEDALERRVLLSSPT 341 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL+ LR+IA WR NA QI+D +LY ++ F++ ++ + + LD+A Y ++ Sbjct: 342 TLIAILRSIAYGWRQHQMEENAAQISDLGKELYSRIVKFVEHIADVREGLDRAAAAYNRS 401 Query: 407 M 407 + Sbjct: 402 V 402 >UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C0V9_BEUC1 Length = 523 Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 125/480 (26%), Positives = 224/480 (46%), Gaps = 54/480 (11%) Query: 1 MDFSIMVYAVIALV-GVAIGWLFASYQHAQQKAE-------------------------- 33 MD + ++ A+ ALV G A+GW A+ + ++A Sbjct: 1 MDTTDLLIAIAALVIGGAVGWFAATARAGSERARLGSDRRAAQERAAAAERSAEAADRAW 60 Query: 34 --QLAEREEMVA-----ELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 +L + + A E A +++ ++EH RAE +L + + + L AD + + Sbjct: 61 AGRLEDERRVTARRVEEERDDADRRVAEAEH-RAEVQLERERTAARERVE-ELRADSKRL 118 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 E + A N++Q L++ E L E + + Q++ L+ PL Sbjct: 119 ADEFETLSRKA-----LAANTQQFLAQAEERLKRTQVESAAELA--KREQAVKQLVEPLT 171 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 L + ++ ++ L ++R +QQ + Q+ E L AL+ + +G WG Sbjct: 172 RTLGDVKSEMTEAEKARLAAHTALAEQVRAMQQSSEQLRTETSQLVTALRA-PQVRGRWG 230 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E+ L R++EA+G+ E ++E Q ++ A ++PD++V+LP K +V+D+K+ Y Sbjct: 231 ELQLRRIVEAAGMVEHVDFEEQETV---ADGTLRPDLVVKLPGRKQIVVDSKVAFSGYLE 287 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLAL 325 A DD TR L H +R HI LG KDY + G + ++ +MF+P E AL Sbjct: 288 AMEARDDETRAKRLAAHARHLRRHIDDLGAKDYGHHVEG--SPEFTVMFVPAEVFLNAAL 345 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 ++ P L+ A ++++ +P+TL+ LRT+ WR E + AQQ+ +L+ ++ +F Sbjct: 346 EQDPTLLEHAFAQDVVIATPSTLVALLRTVGYTWRQEMLAAEAQQVFSVGRELHKRLSVF 405 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL-GVEIKREINPDLAEQAV 444 +S + + L+ D + + L S V+ QA F L G+E ++ P L AV Sbjct: 406 GGHLSTLAKRLNSTVDAFNKMSSSLDS---RVVTQARKFSALQGLEPDLDVPPPLEVLAV 462 >UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae RepID=B4WDX5_9CAUL Length = 404 Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 104/341 (30%), Positives = 177/341 (51%), Gaps = 14/341 (4%) Query: 103 QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGK 162 Q S Q +++Q + A F R D+ R+ + + L P+ + L F+ V Sbjct: 57 QAAQSAQVVADQMVSRATETF----RAQDQLARERMAAQLKPVADTLTKFQEHVAALEKT 112 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 A+E L ++ L ++ EA LT AL+G+ +G WGE VLEA+G+ Sbjct: 113 RAEETGGLKEQLTQLMAASSATRDEARKLTEALRGNTGRRGRWGEQTCRNVLEAAGMAGR 172 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 +++ Q S +D + +PD +VRLP G VIDAK+ L A++ E+ R L+ Sbjct: 173 FDFTEQTSSADDEGRQNRPDFLVRLPGGGLFVIDAKVPL-AFDDEEGDEEARARSVGLR- 230 Query: 283 HIASVRNHIRLLGRKDYQQ--LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 AS++ H+R L K YQ P + D+V++F+P + ALD P+L+++A+++ + Sbjct: 231 IAASLKTHVRQLSSKAYQDQFKP---SPDFVVLFVPGDSFLSTALDHAPDLLSDAMESRV 287 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 ++ +P+TL + +A WR E Q+ NA ++A +LY ++ + SA+G++LD+A Sbjct: 288 VIATPSTLFALCKAVAYGWRAEEQAANADKVAALGRELYKRLSVMGGHASAVGRALDQAV 347 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 Y Q + L S V+ A F L V+ + + P LA+ Sbjct: 348 GKYNQFVGSLES---QVMVSARRFEDLQVDHEGKEIPALAQ 385 >UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas RepID=Q1N9P4_9SPHN Length = 493 Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 126/433 (29%), Positives = 207/433 (47%), Gaps = 41/433 (9%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 AI L + Q A Q+A EE A ++AA Q++ Q + A+ LQ++ Sbjct: 52 AIAELAVEKERVAQAAVQIARHEE--AHIAAA-QRLDQVQAVAAD---------RLQTVQ 99 Query: 77 TSLEADLREVT---TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR----R 129 E LR++ + ++A + + +I + +++ +LS QF + R+ E + R Sbjct: 100 AEREVALRDLAALQSDIQARTRAFEQQITALKDAKDQLSAQFSEIGGRLLETAQTQFLTR 159 Query: 130 VD-------EQNRQSLNSLLSPLREQL----DGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 D E++ L +LLSP+ L +G R +D G A+ R I + Sbjct: 160 ADQRFAQAHEKSEAQLKTLLSPVETTLKRYEEGLARVEKDRVGSYAELREA----IAMVH 215 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 Q+ +E L AL+ KT+G WGE ++E +GL +++ +VS+ + R Sbjct: 216 AGQGQVREETAKLVNALRAAPKTRGRWGEQQFKNLIETAGLSPFVDFQEEVSVTVE-DGR 274 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKD 298 ++PD I+RLP + +V+D K +L AY + D TRE L +H +VR H LGRK Sbjct: 275 LRPDFIIRLPGDQQLVVDVKCSLEAYLNAVESVDGPTRERFLVDHARAVRTHADALGRKA 334 Query: 299 Y-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 Y +Q + D+V+M++P + AL+ EL A +N +++ P T L RT+A Sbjct: 335 YWEQFA--KAPDFVIMYVPGDNFVTAALEADMELWERAARNRVIICGPATFLPLARTLAG 392 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 WR A+++AD +LY+++ + +G L A DNY K + S +V Sbjct: 393 HWRQAKLQDQAKEVADLGKQLYERLATAATHLKRLGSGLSSAVDNYN---KFVGSFDRSV 449 Query: 418 LAQAEAFRGLGVE 430 L FR L VE Sbjct: 450 LPAGRRFRDLNVE 462 >UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7P5_ANADF Length = 428 Score = 150 bits (380), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 111/382 (29%), Positives = 196/382 (51%), Gaps = 40/382 (10%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN----- 139 E+ + A + A++K + ++ RLS+ F+ L+ S+ E R +L Sbjct: 40 ELEATLAAERAGAEEKRALVEDARARLSDAFKALSADALRDSSASFLELARAALGRERAA 99 Query: 140 -------------SLLSPLRE---QLDGFRRQVQ----DSFGKEAQERHTLTHEIRNLQQ 179 SLL+P+R+ +LDG R ++ ++G LT ++R + + Sbjct: 100 AEGELARRQEAIGSLLAPVRDALGRLDGELRAIERAREGAYG-------ALTEQLRQVAE 152 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 AQ+ EA NL +AL+ + +G WGE+ L RV+E +G+ + ++E Q ++E D R+ Sbjct: 153 AQAQVRGEAANLVKALRA-PQARGRWGELQLRRVVELAGMLDRCDFEEQATVEGD-EGRL 210 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PD++VRLP G++VV+DAK L AY A DD R + L +H +R H++ LGRK Y Sbjct: 211 RPDLVVRLPGGRNVVVDAKAPLSAYLEAIEARDDGERRARLADHARQLREHVQQLGRKAY 270 Query: 300 QQLPGLRTL-DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 + LR ++ ++F+P E + AL+ P L+ + + +++ +PTTL+ L+ +A+ Sbjct: 271 WER--LRPAPEFAVLFLPGESFYAAALEADPTLLEASAERQVIVATPTTLIALLKAVAHG 328 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 WR + NA+ +A +LY ++ + +G++L + Y +A+ L + VL Sbjct: 329 WRQAEVAENAEAVAALGRELYKRIADLGGHFARLGRALGGTVEAYNRAVGSLEA---RVL 385 Query: 419 AQAEAFRGLGVEIKREINPDLA 440 A F L P+LA Sbjct: 386 PAARRFEALSAAPAEAELPELA 407 >UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BC1 Length = 364 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 92/309 (29%), Positives = 163/309 (52%), Gaps = 9/309 (2%) Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 R E+ Q++++++ P+ + L Q+ A +R L +I+ L + ++ Sbjct: 24 GRHSTERRAQTVDAMVDPIHQSLRRVDEQLAALDRDRAHQRGALEQQIKQLVESQERLRG 83 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 E L AL+ T+G WGE+ L RV+E +G+ + ++ Q S++ + ++PD++V Sbjct: 84 ETGALVAALR-QPHTRGRWGELQLRRVVELAGMLDHCDFTEQASVQGE-HGVLRPDLVVN 141 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGL 305 LP GK VV+DAK L A+ + A+D+ TR L +H +R H+R L K Y Q P Sbjct: 142 LPGGKHVVVDAKAPLHAFLNAYEAQDETTRTRELAQHARLLREHVRALSAKAYWAQFP-- 199 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 D+V +F+P E + AL+ P L+ + +++ +++ +PTTL+ LR +A W+ E + Sbjct: 200 TAPDFVFLFLPGEHFYTAALEADPSLLEDGVRDGVLIATPTTLIALLRAVAYGWQQETVA 259 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 +A+Q+A+ +L+ ++ F + +G L A Y +A+ S VL A F Sbjct: 260 ESARQVAELGRELHHRLGTFGAHLDRVGTRLRSAVGAYNEAVGSFDS---RVLPSARQFS 316 Query: 426 GLGVEIKRE 434 GV + RE Sbjct: 317 RHGV-VGRE 324 >UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family n=2 Tax=Leptospirillum sp. Group II RepID=A3EVG7_9BACT Length = 477 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 32/346 (9%) Query: 89 RMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL---------- 138 R+EA ++ +K + +S ++L+E F+ L+ + ++R E +Q+L Sbjct: 78 RLEALEKADREKQALLEDSRKKLAETFQALSLEALQQNSRSFLELAQQNLAGFQGQAKGD 137 Query: 139 --------NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN-AQMAQEAI 189 + L+ P+ E L R +QD G+ +L +R+L + + ++ E + Sbjct: 138 LELRQAKIDELVKPIGESLAKVERTLQDLEGERKSAYSSLNEMVRSLVENHIPRLHTETM 197 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY-ETQVSIENDARSRMQPDVIVRLP 248 L RAL+ +G WGE+ L RV+E +G+ + ++ E Q S ++D R++PD++VRLP Sbjct: 198 GLVRALR-QPVVRGRWGEIQLRRVVEMAGMLDHCDFFEQQTSTQSD--ERLRPDLVVRLP 254 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY----QQLPG 304 K VV+DAK+ L AY + + R L EH VR HI LGRK Y Q P Sbjct: 255 GNKQVVVDAKVPLSAYLEAAEMDSEEGRAQKLAEHARQVRQHISQLGRKSYWEQFQPAP- 313 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 ++V++F+P E + AL P LI + ++ +PTTL+ LR +A W+ E Sbjct: 314 ----EFVILFLPGEVFYSSALQADPALIEYGVSERVIPATPTTLIALLRAVAYGWQQETI 369 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 +RNAQ+I LY ++ +G+SL A ++Y +A L Sbjct: 370 TRNAQEINKLGRDLYKRLSDLTGHWLKVGRSLGNAVESYNKATGSL 415 >UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS3_9GAMM Length = 442 Score = 144 bits (364), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 106/391 (27%), Positives = 192/391 (49%), Gaps = 39/391 (9%) Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 LN + LQ+ N LEA+L E A+Q +D + + Q L F LA+ E Sbjct: 35 LNRRIGDLQTRNARLEAEL-------EGAEQRREDLRQSFETARQELDRSFSALASEALE 87 Query: 125 -HSNR-----------RVDE------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 +SN+ ++ E ++ + ++L P+RE L ++ AQ Sbjct: 88 ANSNQFLRLAQSILTQKLSEGQNEIARSENKVEAMLKPIRETLGKTEAEINAMERSRAQA 147 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 L +I+ L NA + +EA NL +AL +G WGE+ L R +E +GL ++ Sbjct: 148 FAALNEQIQRLSSDNATLQREAHNLVQALSRPG-VRGRWGELTLKRAVELAGLSAHCDFT 206 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q +++ D R +PD++V +P + +V+DAK L AY A D R +A + H Sbjct: 207 EQPALDGDG-GRQRPDLLVHMPGNRALVVDAKTPLDAYLDAVAATDPEPRAAAFKRHAQH 265 Query: 287 VRNHIRLLGRKDY----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 +R+ + L K Y +Q P ++ ++F+P +P AL+ +P L+ AL+ ++L Sbjct: 266 LRSRVTELSSKQYWASVEQSP-----EFAVLFLPGDPFLAAALEHEPGLLEYALERQVLL 320 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 +P+TL+ LRT+ W+ + +A +I D ++L ++ + M+ +G++LD++ D Sbjct: 321 ATPSTLIALLRTVEYGWQQSQLTEHALEIRDLGAELSHRLGTMTEHMARLGKALDQSTDA 380 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + + + L V+ A F+ LG+ ++ Sbjct: 381 FNKTVGSLER---QVMPSARRFQELGIRARK 408 >UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMP6_9BACT Length = 472 Score = 144 bits (363), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 124/435 (28%), Positives = 216/435 (49%), Gaps = 56/435 (12%) Query: 5 IMVYAVIALVGVA----IGWLFASYQHA--QQKA-------EQLAEREEMVAELSAAKQQ 51 + + V L+GVA IGWL S + A Q A +QL++RE EL+ ++Q Sbjct: 20 VTLLIVGLLIGVALGCVIGWLAGSRRSAAAPQDARLENELRQQLSQRE---TELARQREQ 76 Query: 52 ITQ--------------SEHWRAEC-ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 +T+ +E AE E+ + ++ ++ DLRE + A Sbjct: 77 LTKLNAACAAAEAQKHSAEKLLAEQREVHEHALKEAKATQDKALGDLRETFKALSA---- 132 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 D ++Q RL+ E LA F+ + + Q ++S+ +L+ PL EQL +++++ Sbjct: 133 --DALKQTHPEFLRLAN--ETLAK--FQETAKGDLSQRQESIKTLVKPLEEQLKIYQQRL 186 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQ---MAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 S E + L ++L+ L Q ++ E + L R L N+ +G WGE L RV Sbjct: 187 AQS---ETSQSSALGEVKKHLETLALQSQSLSSETLQLRRVL-SSNQARGRWGEETLRRV 242 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 +EA+G+ ++ Q+ D++ PD+IVRLP + +++DAK+ + + + D Sbjct: 243 IEAAGMSAHCDFSEQIQ-SGDSK----PDLIVRLPGDRIIIVDAKVPEIDFLTAIDNADT 297 Query: 274 YTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 R AL H ++ I+ LG +DY ++ P LDYV++F+P E F AL+ +LI Sbjct: 298 IKRTEALAAHAKKLKETIKALGDRDYPREFPN--ALDYVVLFLPAESLFSAALEGDHDLI 355 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A IM+ +P +L+ LR+++ W+ QS NA+ IA+ A +LY ++ F + I Sbjct: 356 VWAATKRIMIATPASLIALLRSVSVSWQQHAQSENARSIAEAAQELYARIAKFTEHFDNI 415 Query: 393 GQSLDKAQDNYRQAM 407 + L++A + A+ Sbjct: 416 RKGLERANSAFNDAV 430 >UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTJ9_9GAMM Length = 507 Score = 144 bits (362), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/414 (29%), Positives = 206/414 (49%), Gaps = 46/414 (11%) Query: 43 AELSAAKQQITQ----SEHWRAECELLNNEV----RSLQSINTSLEADLREVTTRMEAAQ 94 AEL A +QI + E R EL ++ R L + L + R+ R+ A+ Sbjct: 76 AELRAENRQIAELRREQEKLREALELGRQDIGQRDRRLAELEERLLQERRQAEARV-ASL 134 Query: 95 QHADDKIRQMI----------NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 + A + RQ+ N++ L+ E LA F+ S + EQ + SL L+ P Sbjct: 135 EEAREHFRQLFEALSAEALRRNNQSFLTLAQEKLAG--FQESAKGDWEQRQASLQQLVQP 192 Query: 145 LRE-------QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN-AQMAQEAINLTRALK 196 ++E +LD R D++ +L ++R L Q + ++ QE +L +AL+ Sbjct: 193 IQESLGKVGERLDLLERARIDAY-------SSLNEQLRALVQDHLPRLHQETASLVKALR 245 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ-PDVIVRLPQGKDVVI 255 +G WGE+ L RV+E +G+ ++ Q S+ + +Q PD+IVRLP GK + + Sbjct: 246 -QPAARGRWGELQLRRVVEMAGMLAHCDFVEQESLGGNGEVGIQRPDLIVRLPGGKQIAV 304 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LPGLRTLDYVLM 313 DAK L AY + A ++ + L++H A ++ H+ LG+K Y + +P T ++V++ Sbjct: 305 DAKAPLNAYLQAVEAMEEGDKALWLKKHAAELKTHMGQLGKKVYWERLVP---TPEFVVL 361 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P E F AL P L+ ++ +++ +PTTL+ LR +A WR E + NAQ I+ Sbjct: 362 FLPGEDLFSAALQADPGLLEYGVEQKVIVATPTTLIALLRAVAYGWRQESLAENAQAISA 421 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 +LYD++ + + +G+ L +A Y +A L S VL A FR L Sbjct: 422 LGKELYDRLGTLAEHWARVGKGLGQAVQAYNRATGSLES---RVLVTARRFRDL 472 >UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8A5_9GAMM Length = 429 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 104/390 (26%), Positives = 192/390 (49%), Gaps = 19/390 (4%) Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN----R 121 N ++R L++ N+ L L + D Q+ N+ +LS + N N R Sbjct: 34 NKKIRMLETRNSELALTLELEQKNKQQLDAMLDQTREQLANTFNQLSNEALNRNNSNFLR 93 Query: 122 IFEHSNRRVDEQNRQSLNS-------LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 + E + +R + + L + +L P+ E L +Q+ + + +L I Sbjct: 94 LAEENLKRFQSEAKADLGTKEKAIEQMLKPINEALQQTSKQIHEIEKDRKESYGSLRSTI 153 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 + + Q+ E NL +AL+ + +G WGE+ L R+ E SG+ ++ Q + Sbjct: 154 DQMTKSQQQLQLETQNLVQALRRP-EVRGQWGEMTLRRLAELSGMVAHCDFFEQTHTNTE 212 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 S ++PD+IV+LP+ +D+++DAK L AY A+DD TR+ L+ H +R+ ++ L Sbjct: 213 TGS-IRPDMIVKLPEKRDIIVDAKTPLDAYLSAIQAKDDSTRQKELKRHAQVIRSRVKEL 271 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 RK+Y + ++V++FIP E AL+ P L+ +++ NI+L +PT + LR Sbjct: 272 ARKNYWAEYS-NSPEFVVLFIPGEQFLAAALEVDPALLEDSMSQNIILATPTNFIALLRA 330 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 ++ W+ + + NA+ I + LY ++ F + +S +G SL +++ A+ L Sbjct: 331 VSYGWKQQALAENAENIRELGETLYKRLSTFGNHLSKLGNSLGSTVNHFNSAVGSLER-- 388 Query: 415 GNVLAQAEAFRGLGVEIKREIN--PDLAEQ 442 VL A F +G+ K +I+ P + +Q Sbjct: 389 -QVLPGARKFTEMGISSKHKISDLPPIEQQ 417 >UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRF3_9PROT Length = 467 Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 91/294 (30%), Positives = 158/294 (53%), Gaps = 11/294 (3%) Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +S+ LL P+RE L + + +++ + + R L+ EI++L + + EA L+ AL Sbjct: 139 RSVGDLLKPMRETLSRYEQGLKELREDQVKARGHLSGEIQSLAAQTSAVQAEARTLSAAL 198 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 K KT+G WGE L V+E +G+ +++ Q + ++ R QPD++VRLP + V I Sbjct: 199 KAGPKTRGRWGETTLRNVVEMTGMSPYCDFDEQFGVVDEDGRRKQPDMVVRLPGERMVAI 258 Query: 256 DAKMTLVAYERYFNA----EDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDY 310 D+K + +F A D+ R++A H ++ H++ L KDY L LD+ Sbjct: 259 DSKAPMA---EWFTAVESGGDEDRRDAAHAAHAKALWTHVQQLAGKDYAAALKKDDALDF 315 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 V++F+P E F A+ +P L EA++ NI++ +P TL+ L++IA WR + NA++ Sbjct: 316 VILFVPAESFFTAAIGARPSLFQEAVEKNIVIATPATLVAILKSIAQSWRQQKAGDNARE 375 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 +A A LYD +R + +G+S+ + +Y + + S VL +A F Sbjct: 376 VAALARDLYDSLRGTSTYLLQLGKSVAQTVKHYDSLVGNMES---RVLPRARRF 426 >UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKR8_SANKS Length = 434 Score = 142 bits (357), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 104/371 (28%), Positives = 178/371 (47%), Gaps = 37/371 (9%) Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS---------------- 140 A +++ M + + RLS+QF LA +N + Q L S Sbjct: 50 AGERLLAMQHDQDRLSDQFRALAADALASNNEQFLGLAEQRLRSTQVAGQADLAARTEAV 109 Query: 141 --LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 L++PL L R+Q+Q + L ++R ++ + + + +L AL+ Sbjct: 110 QQLVAPLTRSLSDVRQQMQVAEEARIASTSALAEQVRGMRDASELLRSQTSSLVSALR-T 168 Query: 199 NKTQGNWGEVVLTRVLEASGL--REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 + +G WGE+ L RV+E +G+ R + ++ VS ++ A ++PD++V L GK++V+D Sbjct: 169 SDVRGAWGEMQLRRVVEVAGMLNRVDFVEQSHVSTDDGA---LRPDMVVHLAGGKNIVVD 225 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY--QQLPGLRTLDYVLMF 314 AK+ + Y A D R L H VR HI LG K Y Q P + ++V+MF Sbjct: 226 AKVAFLGYLDAQQATDPGYRAERLAAHARHVRKHIDDLGSKRYWDQFAP---SPEFVVMF 282 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 IP EP A++ P L+ A N+++V+P TL+ LRT++ WR E + NAQ++ + Sbjct: 283 IPAEPFLAAAVEEDPSLLEYAFGRNVVIVTPMTLMALLRTVSYAWRQEALAENAQKVLEV 342 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV----- 429 +L+ ++ ++ +G+ + A D Y + + L + VL A F L V Sbjct: 343 GKELHGRLATMGSHLTRLGKQIQGAADAYNKTVASLET---RVLVSARRFAELDVVDGDL 399 Query: 430 EIKREINPDLA 440 E ++P L Sbjct: 400 ETPPPVSPHLG 410 >UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanobacteria RepID=Q31BJ4_PROM9 Length = 532 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/296 (27%), Positives = 162/296 (54%), Gaps = 6/296 (2%) Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 QF+ L+ ++ + S + + ++++ P +Q++ R+QV++ +++ L Sbjct: 197 QFQALSGKMLDGSRNALLKTTKETVTE---PFTKQVETLRKQVEELSKDSSEKLGVLAQT 253 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 L++ + + A LT AL+ N +G WGEV L R+LE GL +++ Q++I+ Sbjct: 254 TSELKEKSEDVRGAAQQLTSALRSPN-VKGRWGEVNLKRILEFVGLINYCDFDEQLNIQT 312 Query: 234 DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRL 293 + ++PD ++ +P + +++D+K + +Y A D +E L EH+ VR+HI Sbjct: 313 EGGGSLKPDCVITIPGSRKLIVDSKAPIESYLDAIQATDSNIQEKLLTEHLRKVRSHIDQ 372 Query: 294 LGRKDY-QQLPGL-RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L +KDY L + + +D V+++IPVE A +AL+R P L+ A + NI+L PT+LL Sbjct: 373 LSKKDYANNLSEIGQVVDGVILYIPVEGALSMALERDPSLLEYAFEKNIILTFPTSLLAI 432 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ ++ + ++N +I A +L + FI+ ++IG ++ + ++ +A+ Sbjct: 433 LKGLSMTIQQAEITKNINEIQKNAIELSKRFSNFIEKFNSIGSNITRLNKSFNEAV 488 >UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=Wolbachia RepID=Q5GRS5_WOLTR Length = 449 Score = 138 bits (347), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 95/328 (28%), Positives = 180/328 (54%), Gaps = 19/328 (5%) Query: 115 FENLANRIFEHSNRRVDEQNRQ---SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 F NLA + + + + ++ ++N +++P++E+L+ F DS +E ++ Sbjct: 115 FLNLAKEVIDSKLKETESNFKKRQATINEVVTPIKEKLEKF-----DSEIRELEKERVGA 169 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS- 230 +E +Q+ A M Q + +L AL G +G WGE+ L RV+E +G+ E ++ TQ S Sbjct: 170 YEGLK-EQIGALMNQTS-SLANAL-GKPHIRGKWGEIQLRRVVEMAGMVEYCDFFTQPSV 226 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 I+ + + ++PD+I+++P GK ++IDAK+ L +Y + D ++ L++H +++ H Sbjct: 227 IDKNKDNLLRPDLIIKMPSGKQIIIDAKVPLDSYLDAVSQNDLRIQKEKLKDHSLAIKKH 286 Query: 291 IRLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 I LGRK+Y Q T + V++F+ E F AL+ +P LI ++ +++ +P TL+ Sbjct: 287 INDLGRKEYWNQFEN--TPELVVLFLTGEGVFSAALEYEPALIEIGVEKKVIIATPITLI 344 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LR IA W+ E + +A++I++ LY+++ ++ + +SL A D+Y + Sbjct: 345 ALLRAIAYGWKQEMIAESAKKISELGHILYERICTMGENFDNLRKSLKSAVDHYNKTAGS 404 Query: 410 LSSGRGNVLAQAEAFRGLGVEIK-REIN 436 L + V A F LG+ K +E+N Sbjct: 405 LET---RVFPAAREFNKLGIYTKNKELN 429 >UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus torridus RepID=Q6L1W6_PICTO Length = 355 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/278 (26%), Positives = 148/278 (53%), Gaps = 8/278 (2%) Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 ++E+NR + +++ P+ E L +R ++ + + +L I NL + ++ + Sbjct: 64 INEKNRLEIKNIMEPVYESLKSYREYIERVENERKLDSGSLKASIENLSKYLNEIDHDTR 123 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 L ALK + +G WGE+ L R++E +G+ ++ QV+I N+ R PD+++ LP Sbjct: 124 ALANALKNPS-IRGKWGEITLRRIVEIAGMNPYCDFSEQVTINNEYR----PDMVINLPN 178 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTL 308 G+ ++ID+K+ L +Y Y + ++ + L+ +I NH+R L K Y Q L G ++ Sbjct: 179 GRKIIIDSKVPLNSYLNYVDETNEKLKLDHLKRYIDDFNNHVRTLESKRYWQNLEG--SV 236 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+V+MF+P+E + ++R E + A ++++ +P TL+ L T+ W + S N Sbjct: 237 DFVIMFLPLESLLSIIMERSRETVENAFSRHVIVSTPVTLISLLMTVHAGWNEKELSSNI 296 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 + + ++ F+ D IG +L KA ++Y++ Sbjct: 297 NNLMLKIKDFRSRLDTFMKDYDEIGNNLGKALESYQRT 334 >UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2A7_ACIFD Length = 479 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 108/360 (30%), Positives = 172/360 (47%), Gaps = 53/360 (14%) Query: 63 ELLNNEVRSL-QSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 +L++ ++RS + I T+L A E T++ D+++Q+ S +SEQ N Sbjct: 130 KLVDEQLRSAREQITTTLRASGSEAATQLSTTLTERMDQLKQLAAS---ISEQLAN---- 182 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 ++R+ +SL S F E QE T HE Sbjct: 183 -----DQRLTGTVEESLRS-------------------FVAENQELRTRVHE-------- 210 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 LT+AL+ K +GNWGE+VL +L +GL + +++ QV+ +D + Sbjct: 211 ---------LTQALQRSPKQRGNWGELVLENLLVGAGLTQHRDFDLQVAFRDDDGRTVIA 261 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D I+ LP + +VIDAK+ LV Y R A +D ++A + H ++R I L Y + Sbjct: 262 DAIINLPGERHLVIDAKVQLVDYLR---AVEDPANDTAARAHAEALRRQINELADHRYDR 318 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 L LD +F+P+E A LAL+ P L+ A+ I L +PTTL+ L+ + LWR Sbjct: 319 LVD-GALDGTFLFVPIESALALALETDPALMELAIGKGIFLATPTTLIPVLKLVGFLWRG 377 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 + A++ A +L DK+ F + I + L A++ Y +A +L SGRGN +A A Sbjct: 378 AERDSRAEEAERLARRLADKIASFAESFLQIDKGLQVARNAYERAEGQLRSGRGNAMALA 437 >UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKL5_NAKMY Length = 398 Score = 136 bits (343), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 94/331 (28%), Positives = 165/331 (49%), Gaps = 23/331 (6%) Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 D+++ L++LL+P + + + + + A L ++ L +A + + Sbjct: 34 DQRSAAELDALLAPASDAMQRVEQHLHEVERDRAAAYAGLREQVSALHLTSADLNRH--- 90 Query: 191 LTRALKGD---NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND--ARSRMQPDVIV 245 TRAL G + +G WGE+ L RV+E +G+ E +++TQV + +D + ++PD+I+ Sbjct: 91 -TRALAGALSAPQVRGRWGEMQLQRVVELAGMVEHCDFDTQVGVRSDDPEAAGVRPDMII 149 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY----QQ 301 RL G+ + +DAK+ +Y D+ R + L H ++R+H+ L K Y Q Sbjct: 150 RLAGGRQIPVDAKVPFASYLEAAECTDERRRSALLAAHSRALRSHVDALAAKAYWRHFQP 209 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 P ++V++F+P EP AL P L A N+++ +PT+L+ LRT+A++WR Sbjct: 210 AP-----EFVVLFVPGEPLLDAALAVDPGLADYAFARNVVMATPTSLIGLLRTVAHVWRQ 264 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E S +A Q+ + L+ ++ ++ +G SLDKA Y ++ L S VL A Sbjct: 265 ERLSASAAQVHELGRDLHRRLATLAGHLTTLGASLDKAVRAYNGTVRSLES---RVLVSA 321 Query: 422 EAFRGLGVEIKREINPDLAEQA--VSQDEEY 450 LGV + +P E V Q+ Y Sbjct: 322 RKLADLGVTGEELPSPAQVETTTLVPQEAAY 352 >UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=Chlamydiaceae RepID=RMUC_CHLTR Length = 427 Score = 135 bits (339), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 83/284 (29%), Positives = 152/284 (53%), Gaps = 19/284 (6%) Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 + Q++ S+L+P+ L F++ +++ K+A++R L ++ L ++ +E LT Sbjct: 98 EKTQAITSVLAPVHNTLSAFKQNLENFETKQAEDRGALKEQLSQLLTAEQKLERETQALT 157 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 LK ++G WGE+ L R+LE SG+ + +Y TQ +++ SR D+++RLPQ + Sbjct: 158 NILKHPG-SRGRWGEIQLERILEISGMLKYCDYSTQTVDSSESSSRA--DIVIRLPQNRS 214 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY----QQLPGLRTL 308 +VIDAK E Y D++ + L + +++HI+ L K Y +Q P Sbjct: 215 LVIDAKTPFS--EEYLT--DNHADPTDL---VKKIKDHIKTLKTKSYWDKFEQSP----- 262 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V++F+P E F A+ PEL+ A ++N++L SP TL+ L+T+ ++W+ E+ Sbjct: 263 EFVILFLPGESLFNDAIRCAPELMDYAGQSNVILSSPVTLMALLKTVTHVWKQENLQNQI 322 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 ++I LY +M D +G+ L +A +Y LS+ Sbjct: 323 REIGQLGKDLYQRMHKLFDHFHKVGKHLGQAVHSYNDMSSSLSA 366 >UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9Q8_9ACTO Length = 387 Score = 134 bits (338), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 89/304 (29%), Positives = 144/304 (47%), Gaps = 7/304 (2%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L P+ E LD R + A L ++ + Q +A + QE L AL+ Sbjct: 53 LEPVHESLDHLHRLLAGIERDRATAHGELREQMGTVGQTSAMLRQETAALVTALR-TPHV 111 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGEV L RV+E +GL E ++ Q S NDA + ++PD++V L G+ VV+DAK+ Sbjct: 112 RGRWGEVQLRRVVEVAGLLEHCDFVEQPSATNDAGAGVRPDLVVTLSDGRQVVVDAKVPF 171 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR-TLDYVLMFIPVEPA 320 Y AED R + H +R H+ +L + Y R + ++F+P + Sbjct: 172 TGYIEAVQAEDVAVRAERIVAHARQLRAHVDILAARRYPT--AFRPAAPFTVLFVPSDGF 229 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 AL+ +P L+ +++L +P+TLL LRT+A WR E +R+A Q+ + +L+ Sbjct: 230 LTTALEAEPGLLEYGFARDVVLATPSTLLALLRTVAYSWRQERLARDADQVLEVGRRLHA 289 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 ++ ++ +G +L Y + + S +VL A F LGV P Sbjct: 290 RLSTLSGHLTRLGSALSSTLTRYNETVGSYES---SVLVAARRFDDLGVAESPVPTPPPV 346 Query: 441 EQAV 444 E V Sbjct: 347 EATV 350 >UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZN7_9ACTO Length = 368 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 82/271 (30%), Positives = 146/271 (53%), Gaps = 7/271 (2%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+S L P+ E L +V ++ + L ++ + QQ++ Q+ Q + L AL+ Sbjct: 66 LSSQLRPIYESLHSLSNKVHQVDAQQRENLAGLRSQLVSAQQVDQQILQATLGLDSALRN 125 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA-RSRMQPDVIVRLPQGKDVVID 256 +K +G WGE L RVLE SGL + ++ QVS++ + S PDV+V LP ++ID Sbjct: 126 TSK-RGTWGEASLRRVLEMSGLTKHIDFAEQVSLDTEVDESGAIPDVVVYLPNNAALIID 184 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK+ L AY + N ED + L+ H +V+ H+ +L ++ Y Q +++D V++F+P Sbjct: 185 AKVPLDAYLQVKNLEDT----AQLKSHALAVQRHVTVLAKRQYAQ-KLTKSVDSVILFMP 239 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E +L+ P L +AL+ +++V P L+ LR++ +LW + + +AQQI + Sbjct: 240 SEALVSASLEADPTLFEKALQQGVIVVGPAGLMALLRSVGHLWARQSLAEDAQQILKLGT 299 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L ++ ++ +G+SL +Y Q + Sbjct: 300 TLTTRLNKLSSLLADLGKSLSNTVKSYNQVI 330 >UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKG7_DESAH Length = 395 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 88/334 (26%), Positives = 175/334 (52%), Gaps = 23/334 (6%) Query: 112 SEQFENLANRIF----EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 S QF +LA+ F + + + +D + + + S+ P+R+ LD + ++ G+ ER Sbjct: 56 STQFLDLADHYFAGYIKEARKELDIKGDEMIRSV-DPVRQALDRY----ENRLGQMELER 110 Query: 168 H----TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGY 223 +LT ++ + + + +E NL ++L+ + +G WGE+ L +V E +G+ E Sbjct: 111 ERAFGSLTAQLVEMARTQESLQRETGNLVKSLRLPH-VRGRWGEITLRKVAELAGMAEQC 169 Query: 224 EYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 ++ Q+ + + ++PD++V LP +++V+D+K+ L AY + R++ L H Sbjct: 170 DFTEQLQ-KGSGKGALRPDMVVHLPGDRNIVVDSKVPLAAYLDALESTTKEARKAGLLNH 228 Query: 284 IASVRNHIRLLGRKDY--QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 V HI L K+Y Q P T ++V++FIP E F AL ++P+LI A++ ++ Sbjct: 229 ARQVLAHINALSAKEYWRQFTP---TPEFVVLFIPGENFFSAALAQKPDLIETAIQKGVI 285 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 L +P TL+ L++++ W NA++I S+L+ ++ L + M+ +G+ +++A Sbjct: 286 LATPATLISLLKSVSYGWSQAKSHENAKEITRLGSELFQRISLMAESMNLLGKDIERAAS 345 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 Y + + + V+ A+ LG+ R I Sbjct: 346 TYNKTVGTIER---RVMVSAKKLSNLGIAEDRNI 376 >UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEF9 Length = 394 Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 96/333 (28%), Positives = 165/333 (49%), Gaps = 19/333 (5%) Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 D Q + + + PL ++ + +Q + ++ L +I +L Q N ++ + + Sbjct: 60 DAQMAGEITAAIGPLAASVNHLQENLQSQDRTQLEQITRLNTQIGHLSQQNLRLQESTGS 119 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L AL + +G+WGEV L R++E +GL ++ETQVS D + R +PD+ V LP G Sbjct: 120 LASALNSTTQ-RGDWGEVQLKRIVEYAGLLPHVDFETQVSSVRDGK-RHRPDMTVNLPGG 177 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL-D 309 ++IDAK L A +A D ++H ++ HI L K+Y + T D Sbjct: 178 GTIIIDAKTPLSARMGDADASD--------EDHARALLRHIDALASKEYWK--SFDTAPD 227 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V+ F+P + A P++I AL N++L SP TLLV L+T+A WR S +A Sbjct: 228 FVVCFVPTDGLLSSAASTYPKMIDHALGKNVVLASPATLLVLLKTVALNWRQADMSTSAA 287 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 ++ ++LY+++ + ++ +G SLD++ ++Y + + L S L A F G+ Sbjct: 288 EVLKLGTELYERIGTLVTHVTRMGSSLDRSVEDYNRFVSSLES---RFLVTARKFPSTGI 344 Query: 430 ---EIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 E+ D + VS +E R R + P Sbjct: 345 VATELDAVAELDSRSRGVSAEELTRPRISGQDP 377 >UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campylobacter RepID=B9KDZ1_CAMLR Length = 446 Score = 133 bits (334), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 111/444 (25%), Positives = 216/444 (48%), Gaps = 21/444 (4%) Query: 13 LVGVAIGWLFASYQHAQQKAE-QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRS 71 LV V + +++ ++ +QKA+ + + +V + A ++ ++ +LL+ ++ Sbjct: 9 LVVVILAFIWYVFKSQKQKAKMEFLNQNNIVLQNQLANLELEKTTLMEKNSKLLDEKILY 68 Query: 72 LQSINTSLEADL-REVTTRMEAAQQHADDK-------IRQMINSEQRLSEQFENLANRI- 122 L S N +LEA L ++ T+ E H ++ + +I E++ + L + Sbjct: 69 L-SKNEALEAKLAQKEQTQQELLNIHLKERANLKEEYTQTLIKLEEKYKQSLAELKQELE 127 Query: 123 --FEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + N V QN+ N + E++ ++ V++ + +L I N+ + Sbjct: 128 QNLQKQNANVLNQNKLMFNDDAKKILEEIFLPVKKSVKEYNERLNSNEVSLKTHIDNMFK 187 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + M + A L + LKGD K +GN+ E+ L VLE SGL EG +Y+ Q +++ ++ + Sbjct: 188 FSQNMTENADKLAKILKGDKKIRGNFAELQLKSVLENSGLVEGVQYKLQERFQDEGKTYI 247 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 PD +V L + K ++IDAK +L + FN ED ++ + ++++ I L +K Y Sbjct: 248 -PDAVVFLDKQKSIIIDAKFSLPSD---FNFED--ISQNTCLDLAYNLKSRIDELAKKPY 301 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 Q T ++VL+FIP + L L+ E+ A K + L +P TL +AL TI W Sbjct: 302 MQYDK-HTYEFVLLFIPYQNILDLILNVDLEIYQYAYKKKVYLTTPNTLFMALNTINISW 360 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + + N + D K +DK +DD I +++ + N KL+ G GN+ + Sbjct: 361 KNIQSNENILKAFDELGKFHDKFAGVLDDFEKIKENIKRLNTNVDNMQTKLTHGSGNIAS 420 Query: 420 QAEAFRGLGVEIKREINPDLAEQA 443 + + LG + ++ I ++++++ Sbjct: 421 RVIKLKELGAKTQKLIKCEMSDES 444 >UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinispora RepID=A8M2X7_SALAI Length = 403 Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 13/320 (4%) Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 Q+++++ ++PL E L + ++V + L ++R + ++ ++ E L Sbjct: 67 QSQEAVARAVAPLHETLHRYEQRVNELERDRVDAYAELRAQVRAMSTVSGELRTETKQLV 126 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 AL+ + +G WGE L R++EA+G+ E ++ QV+ + ++PD++VRL G+ Sbjct: 127 AALRAP-QVRGRWGEHQLRRIVEAAGMLEHCDFAEQVTAATTDQRVVRPDLVVRLHGGRS 185 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI----RLLGRKDYQQLPGLRTL 308 VV+DAK+ AY A D+ R++ L H +R HI + Q P Sbjct: 186 VVVDAKVPFEAYLTAMEARDERGRDTHLDAHARHLRAHIDALAAKAYWAAFDQSP----- 240 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V++F+P +P +A+ R P L+ A N++L +P TL+ LRT+A WR E + NA Sbjct: 241 EFVVLFVPADPFLDVAVQRDPTLLEHAFARNVVLATPATLVALLRTVAYTWRQEVLASNA 300 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + A +L+ ++ + + +G +L A Y +A+ L + VL A LG Sbjct: 301 VAVHTLARELHGRLCTLGEHVGRLGSALGGAVTAYNRAVGSLEA---RVLVSARKLAELG 357 Query: 429 VEIKREINPDLAEQAVSQDE 448 V + P E A Q + Sbjct: 358 VSDEELATPAQVELAPRQPQ 377 >UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A518_GEMAT Length = 404 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 87/278 (31%), Positives = 150/278 (53%), Gaps = 11/278 (3%) Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 S++ LL P+RE L + + + +A+ +T + + + E L++AL+ Sbjct: 83 SVSELLVPIRETLSRYDAALGELGRAQARVAGQITERLDAVTLAGETLRHETQQLSQALR 142 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 + +G WGE+ L RV E +G+ ++E QV++ ++ +PD+IVRLP + +V+D Sbjct: 143 APS-VRGQWGELQLRRVCELAGMLAYCDFEPQVTVRGES-GVQRPDLIVRLPGDRRIVVD 200 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY----QQLPGLRTLDYVL 312 AK L AY A D+ TR + L H A VR H++ L K Y P D+V+ Sbjct: 201 AKAPLSAYLEAMAAGDERTRTARLAAHAAQVRAHVQQLAAKRYWAQFDDAP-----DFVV 255 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +F+P E F ALD P L+ AL++ ++L +PTTL+ L+ A WR E + A Q+A Sbjct: 256 LFLPGEAFFAAALDADPSLLEAALEDRVLLATPTTLIALLKAAAYGWRQERVADEAAQVA 315 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 +L++++ +F + + +G+ L +A +Y +A+ L Sbjct: 316 ALGRELHERLSVFDEQLVELGRGLQRAVLSYNRAIGSL 353 >UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LE03_GORB4 Length = 391 Score = 132 bits (332), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 91/308 (29%), Positives = 151/308 (49%), Gaps = 17/308 (5%) Query: 131 DEQNRQS------LNSLLSPLREQL----DGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 D RQS +N ++ PLR L D RR + G A LT ++R + Sbjct: 53 DAARRQSSAIGSQVNHIVEPLRSTLTALADELRRVEHNRVGAYAG----LTEQMRGMHAA 108 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 + + + L AL + +G WGE+ L RV+E +G+ ++ TQVS ++ A ++ Sbjct: 109 SMALGDQTRQLANALH-SSHARGRWGEIALERVVELAGMTRHCDFSTQVSAQS-ATGTVR 166 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PD++V L G+ +V+DAK+ L AY R D + L +H +VR+HI L K Y Sbjct: 167 PDLLVHLAGGRTIVVDAKVPLDAYLRAAEVTDRAEAQRLLADHARAVRSHITKLSAKAYW 226 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 T + V++F+P E A ELI N+++ +PTTL+ LRT+A WR Sbjct: 227 TAFD-NTPEMVVLFLPAEAVLEAAARADAELIEYGFGRNVVIATPTTLVALLRTVALGWR 285 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 ++ +R+A I + L+ ++ + + ++G SL K ++Y A+ + + G + Sbjct: 286 HDAMARDAAVIHELGLTLHQRLHSVLGHLESVGSSLRKTVESYNSAVGVVENRLGVTARR 345 Query: 421 AEAFRGLG 428 GLG Sbjct: 346 LAELEGLG 353 >UniRef50_Q0S487 Possible DNA recombination protein, RmuC family protein n=2 Tax=Actinomycetales RepID=Q0S487_RHOSR Length = 452 Score = 132 bits (331), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 11/293 (3%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 + E S RR + ++ L+ PL E + QV L+ ++ + + + Sbjct: 121 VSEDSARRHSGAIGEQISRLVGPLHEAVGALAEQVDHVERNRVHAYAGLSEQVEGMHRTS 180 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ + L AL+ + +G WGE+ L RV+E +G+ +++TQVS + ++P Sbjct: 181 QMLSTQTNRLVTALRAP-QIRGRWGEIQLERVVELAGMVRHCDFDTQVSKDG-----VRP 234 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D++V L GK +V+DAK+ AY ED RE L H +R H+ L K Y + Sbjct: 235 DLLVYLAGGKQIVVDAKVPFAAYLDAAQTEDPTAREQHLIRHARQLRTHVDQLADKTYWE 294 Query: 302 L--PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 P T ++V++F+P +P AL L+ A N++L +PTTL+ LRTIA+ W Sbjct: 295 SFDP---TPEFVVLFVPGDPFLDAALIADSGLLEHAFSRNVILATPTTLIALLRTIAHTW 351 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 R E S++A +I +LY ++ + +G L KA D++ + + S Sbjct: 352 RQEALSQDAAKIHQLGRELYSRLGTVGAHLDRLGSQLGKAVDSFNLTVASMES 404 >UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacterium RepID=C3PFD8_CORA7 Length = 360 Score = 131 bits (329), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 79/274 (28%), Positives = 146/274 (53%), Gaps = 3/274 (1%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L+PL + +D Q+Q+ A L+ +++ + + + +++ L AL+ N Sbjct: 55 LAPLEKAMDRLGLQIQEIEEDRATSLAALSSQVQAVTRTSTRLSDRTDKLVGALRSPN-V 113 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGEV L RV+E G+R+ ++++QVS + S ++PD+++ L G+ +V+DAK+ L Sbjct: 114 RGRWGEVQLERVVELGGMRKHVDFDSQVSARING-SLVRPDLVIHLAGGRSIVVDAKVPL 172 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 AY ED R L+ H +R+H++ L KDY + T +V++F+P + Sbjct: 173 SAYLDAMETEDPEERAGYLRRHAHLMRSHVQALASKDYIEAFS-PTPQFVVLFVPADTFV 231 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL EL+ A + N ++ +P+TL LRT+A W++E S A+++ LY + Sbjct: 232 DAALSIDAELLEFAFERNAVIATPSTLFALLRTVAVSWQHEEISDKAREVQRLGRDLYTR 291 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 + + +G+ L++A + Y ++ L S G Sbjct: 292 LNTLNEHYDKVGRGLERAVEAYNASLASLDSRVG 325 >UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16 Tax=Bifidobacteriaceae RepID=D2Q6M6_9BIFI Length = 447 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 81/297 (27%), Positives = 155/297 (52%), Gaps = 18/297 (6%) Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 S R++ EQ++ + S L+P+++ LD + +V +E L +++ L + A++ Sbjct: 114 SERQLREQSK--VLSALAPVQKNLDALQEKVSQIEEGRKREMGALGEQLKGLGEQQARLD 171 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 +E +L+ AL+ +N+ +G WGE L ++E++GL E +++TQV + + +PD+++ Sbjct: 172 RETSSLSAALR-NNRVRGAWGEAQLRNIVESAGLLEHVDFDTQVVVTDADGHTQRPDMVI 230 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRE------SALQEHIASVRNHIRLLGRKDY 299 +P GK + IDAK Y+R D ++E L+ H +VR H+++LG K Y Sbjct: 231 HMPGGKTIPIDAKAPYADYQRACEIPDTASQEELTRKADLLRAHAKAVREHVKVLGDKAY 290 Query: 300 ----QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 P D+V+ FIP E AL+ P L+ +A + L SP TL L+++ Sbjct: 291 WNAFSDAP-----DFVIAFIPNESLLQAALETDPTLMDDAFARKVALTSPITLWAVLKSV 345 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 A W+ + + +A+ + D + +LY++ + + + +G ++ + Y L S Sbjct: 346 AYAWQQQSLTDDAKMLFDLSRELYERFAVLGERATKLGTAITRTVGAYNAFASSLES 402 >UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD1_ELUMP Length = 402 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 112/429 (26%), Positives = 201/429 (46%), Gaps = 60/429 (13%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECE 63 S+ + +I L+ VA F Y A +KA A ++ SE + E Sbjct: 2 SVWILVLIILI-VAAACFFTGYLLADKKAA-----------FKTASLEVKLSEREQNEER 49 Query: 64 LLNN-EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L+N + S +++NT+ ++ L T +E Q+ A + Sbjct: 50 LVNTFKALSAEALNTNNKSFLELAKTTLEKYQESAKGDL--------------------- 88 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 E+ +Q++NSL+ P++E L F ++ G+ +ER ++ + Sbjct: 89 ---------EKRQQAINSLVEPVKETLGKFEVKI----GEIEKERKGAYEGLKEQMHMLL 135 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 Q L+ AL + ++G WGE+ L +++E +G+ ++ Q S+ R++PD Sbjct: 136 GTTQ---TLSNALTSSS-SRGRWGELQLKKIVELAGMMNHADFVEQSSVSTQ-DGRLRPD 190 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY--Q 300 +IV+LP G ++V+D+K + Y +D R + +E A +++HI+ L K Y Q Sbjct: 191 LIVKLPGGSNIVVDSKAPVSKYLEAVELKDPSARHAKFKEFAAQIKDHIKSLSSKAYWEQ 250 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 P T D+V++FIP + F AL+ +P LI A+K +++ +PTTL+ L+ IA WR Sbjct: 251 FSP---TPDFVVLFIPGDSYFAAALEAEPALIENAVKEKVIVATPTTLISLLKAIAYGWR 307 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 ++A++IA +LY+++ + IG L+ A +Y Q ++ S VL Sbjct: 308 NVSVEQDAKEIAALGKELYERIATMSEHFYKIGSGLENATKSYNQTLRSYES---RVLVS 364 Query: 421 AEAFRGLGV 429 A F+ V Sbjct: 365 ARRFKDFKV 373 >UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN95_9ACTO Length = 409 Score = 130 bits (328), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 91/302 (30%), Positives = 155/302 (51%), Gaps = 25/302 (8%) Query: 178 QQLN-AQMAQEAI-----NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 QQ+N +M+ EA+ +L+ AL+ + +G WGE+ L R +E +G+ ++ Q S Sbjct: 97 QQVNEVRMSGEALRRETASLSTALR-KPQVRGRWGELHLRRTVELAGMVAHCDFTEQTST 155 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 D ++PD++VRL +GK++V+D+K+ L A+ ++D RE L+ H +R H+ Sbjct: 156 ATD-DGMLRPDLVVRLAEGKNLVVDSKVPLAAFLEAAESDDADFREERLRAHARHLRTHV 214 Query: 292 RLLGRKDY-QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 L K Y +LP T ++V++F+P E ALD +P L+ A + ++L +PTTL+ Sbjct: 215 DQLSAKSYWARLPS--TPEFVILFVPGESFLSAALDVEPSLLEYAAERRVILATPTTLIA 272 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 LR A W + +AQQ+ + +LY+++ D + +G+SL A D Y + + Sbjct: 273 TLRAAAYAWNQSALTESAQQVFELGRELYERLSTMGDHLGRVGRSLTSAVDAYNRTVGSF 332 Query: 411 SSGRGNVLAQAEAFRGLGV---------EIKREINPDLAEQAVSQDE--EYRLRSVPEQP 459 S V A R L V I+ + P A + ++ DE + R +P P Sbjct: 333 ES---RVFTTARKLRDLHVTEAELAAMETIEASVRPLAAPELLALDEPDDATRRWIPTPP 389 Query: 460 ND 461 D Sbjct: 390 VD 391 >UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8X6_9ACTN Length = 437 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 86/292 (29%), Positives = 148/292 (50%), Gaps = 15/292 (5%) Query: 144 PLREQLDGFRRQVQDSFGKEAQERH--TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 P++ +LD + +V + +EA++R L +++ L ++ +L+ AL ++ Sbjct: 118 PVKAKLDDLQHKVM--YMEEARKRDLGALDEQLKGLDSQQRRLDSVTSSLSSAL-CNSSV 174 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGEV L ++EA+GL E +++TQV + +PD+I+ LP K + ID+K Sbjct: 175 RGAWGEVQLKNIVEAAGLTEHIDFDTQVKLSTSDDKSFRPDMIIHLPGNKTIPIDSKAPY 234 Query: 262 VAYERYFNAEDDYTRESA------LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 Y R +D E+ L+ H A +R HI L +K Y +L D+V+ FI Sbjct: 235 NNYRRACEIDDSADEEALRRRTELLKAHAADLRGHINALSKKSYWELFETNP-DFVIAFI 293 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 P E AL +L+T A + L SP TL L+++A W + S NA+++ + + Sbjct: 294 PNEALLQAALAVDEDLLTYAFSKKVALTSPVTLWAVLKSVACAWHQQELSDNARELFNLS 353 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 +L +++ D +SA+G++L A NY + L + VLA A + L Sbjct: 354 QELCERLATLGDKVSAVGKNLSSAVKNYNSMVGTLET---RVLASARKMKQL 402 >UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, RmuC family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVY7_METI4 Length = 385 Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 83/335 (24%), Positives = 170/335 (50%), Gaps = 25/335 (7%) Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ---------------- 133 +EA + ++KI + +++ L F++LA+ + E +++ + Q Sbjct: 17 LEAEKLAQEEKITWITKTQETLKTMFQSLASEVLESNSKSILGQVTFHFHSLFENLKTDW 76 Query: 134 --NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 ++ + +++SPL + L+ Q+Q+ K +L+ I L + ++ + A L Sbjct: 77 SLKKEEIKNIVSPLEKGLEALDNQLQNLESKREGAYSSLSSHITLLAEAYKELHRSATRL 136 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 ++LK +G+WGE L R++E +G+ E Y Q + D R+ D+I+ +P + Sbjct: 137 EQSLKSP-LVRGSWGEYQLQRLVEMAGMEEHISYLNQ-PLTEDKRA----DMIIFIPGNR 190 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 + +DAK + AY +A+++ R+ L+EH+++V+ IR L +K+Y + +YV Sbjct: 191 KIFVDAKTPMRAYLEAVSADNEILRKEKLKEHLSAVKERIRELSKKEYGRTQT-EAFEYV 249 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 +MF+P E L+ + P + AL+ N++L SP L L+ IA W+ + + ++I Sbjct: 250 IMFLPSEGLLSLSFEADPGIFQYALERNVLLASPINFLALLKAIAFGWQQQRVTEEVEKI 309 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 A+ KLYD + ++ + ++ + D + +A Sbjct: 310 AEEIKKLYDSFIELLTTLTKMRKAFENTIDLFNKA 344 >UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SFL0_NOCSJ Length = 374 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 85/284 (29%), Positives = 147/284 (51%), Gaps = 16/284 (5%) Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 Q+ +E +L+ AL+ + +G WGE+ L R +E +GL + ++ QV +++ AR +PD Sbjct: 93 QLQRETRSLSTALR-KPQVRGRWGELHLRRAVELAGLVDRCDFSEQVRLDDGAR---RPD 148 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 ++V L G+ VV+DAK+ L AY + +D+ + L+ H+ +R H+ LG K Y Sbjct: 149 LVVHLVGGRRVVVDAKVPLDAYLDATSTDDEEEHRAHLRRHVTQLRTHVEALGSKQY--- 205 Query: 303 PGLRTLD----YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 R+L+ +V++F+P E AL+ P LI A ++L +PTTL+ LRT+A+ Sbjct: 206 --WRSLEESPEFVVLFVPAESFLAAALETDPTLIEHAAARQVVLATPTTLIALLRTVAHG 263 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 W +E + A++I +L+ ++ + +G+SL+ A +Y Q + L S VL Sbjct: 264 WSHEALADQAREIHRLGRELHGRLLGMTGHLDQLGRSLNAAVGHYNQTVGSLES---RVL 320 Query: 419 AQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 F L V + +P + LRSV + D+ Sbjct: 321 VSGRRFADLSVTDEELPSPRQIDATARSISPSGLRSVERRAADD 364 >UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E538 Length = 384 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/280 (25%), Positives = 150/280 (53%), Gaps = 10/280 (3%) Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 E LN L+ PL++ L ++ +++ + E L + L + + + I L Sbjct: 74 ENTGLKLNGLIEPLKDSLKTYQTYIENIERERKSESGALKDNLDTLSRKITDLEHDTIKL 133 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 + ALK + +G WGE+ L R +E +G+ ++ Q ++ D ++ PD+I++LP + Sbjct: 134 SGALK-NPSIRGKWGEITLRRTVEIAGMTPYCDFIEQ-AVSEDRLTK--PDMIIKLPNRR 189 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY-QQLPGLRTLDY 310 +V+D+K+ L Y + N E+D T L +++ + +H+R L K Y ++ G ++D+ Sbjct: 190 TIVVDSKVPLSGYFEHMNGEEDKT---FLDKYMLAFNSHVRDLASKKYWEKFDG--SVDF 244 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 V+MF+P+E L + +PE+I +A+ +++ +P TL+ L T+ W+ + N Sbjct: 245 VVMFLPMESLLSLVMSNKPEIIEDAISKKVIIATPVTLISLLLTVHMGWKDINTVENFNG 304 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 + + + Y+ M+ F+ D++ ++L K+ D++ + + + Sbjct: 305 LIAKIKEFYNNMQTFVGDLNETSKNLSKSIDSFNRMTRDI 344 >UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W801_9ACTO Length = 414 Score = 127 bits (320), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 86/315 (27%), Positives = 152/315 (48%), Gaps = 23/315 (7%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L+P+R QL+ +V+ + A + +L ++R Q ++ +L AL+ + Sbjct: 79 LAPVRSQLEQVGARVEQMERQRAGQHASLAEQLRARAQAERELLVTTSSLASALR-SRSS 137 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIEN-----------DARSRMQPDVIVRLPQG 250 +G WGEV L RVLE SG+ ++ Q S+ + + +PDV++ LP G Sbjct: 138 RGLWGEVELARVLEISGMMPHVDFSEQRSVGSVLASRSSATASSGTTASRPDVVIHLPGG 197 Query: 251 KDVVIDAKMTLVAYERYFNAED-----DYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 + +D+K + AY R E D R + ++EH ++R+H+ L + Y + G Sbjct: 198 GYLALDSKAPMDAYLRACGVEGEPASADTERRTLMKEHAKALRSHVDQLAARRYDRALG- 256 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 + + V++F+P EP ALD P L+ AL+ + L SP +LL LR A W + Sbjct: 257 SSPELVVLFVPAEPVLAAALDADPTLMDHALEQGVALTSPASLLSLLRVCATAWARTAVN 316 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 +A+++ + LY+++ + A+G +L ++ Y + + + S +L A +F Sbjct: 317 EDARELLELGRTLYERLGTVAGHLDALGGALTRSVSAYNRTVASMES---RLLVTARSFE 373 Query: 426 GLG--VEIKREINPD 438 L V R I PD Sbjct: 374 TLASSVPSPRSICPD 388 >UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VT69_9CORY Length = 355 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 139/269 (51%), Gaps = 5/269 (1%) Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L + +DG ++ A+ L E+++L Q + +A + L L G +G Sbjct: 45 LADAMDGISSRLHALDVSRAETSARLNQEMQHLTQTSLALAGKTDKLLTTLGGPG-LRGQ 103 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE+ L RV+E SG+ + +++TQVS + + SR++PD++V L G+D+V+D+K+ L AY Sbjct: 104 WGEMQLQRVVELSGMIKHCDFDTQVSTTSHS-SRVRPDLVVHLAGGRDIVVDSKVPLSAY 162 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL-RTLDYVLMFIPVEPAFLL 323 D + L+ H +R H+ L KDY + G T ++V+MFIP + Sbjct: 163 TDALEVNDSEEQAGYLRRHAYLMRQHVTQLSAKDYAR--GFAHTPEFVVMFIPADSFLDA 220 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 AL EL+ A NI++ +P+TL+ LRT+A W+ A +I ++LY ++ Sbjct: 221 ALKCDSELLEFAFSRNIIIATPSTLMALLRTVALGWQSADVEAKAGEIHALGTQLYRRLA 280 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 + + +G LDK + Y + + S Sbjct: 281 TLNEHYAKLGSLLDKTVEQYNVMIGSMES 309 >UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinobacteria (class) RepID=A5CT70_CLAM3 Length = 459 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 91/320 (28%), Positives = 162/320 (50%), Gaps = 23/320 (7%) Query: 108 EQRLSEQFENLANRIFEHSNR----------RVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 E L EQ +RI E R R +E R + + LSP+ E L + +V Sbjct: 95 ESHLREQIGQQEDRIAELQTRLREIQRAEVARTEEDGR--VLTALSPVAESLKQVQAKVH 152 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 + + Q+ L+ ++R+ + ++ A L AL+ N T+G WGE L V+EA+ Sbjct: 153 ELEEQRRQQHGELSEQLRSATEAEERLRATAETLASALR-SNSTRGVWGETQLRSVVEAA 211 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY------ERYFNAE 271 GL +++ Q S+ + A+ +PD++V LP GK++ +DAK AY Sbjct: 212 GLIHRVDFDVQTSV-STAQGIGRPDMVVHLPGGKNIAVDAKAPFTAYLEASAIPASATGS 270 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL-RTLDYVLMFIPVEPAFLLALDRQPE 330 + R++ +++H+ +VR+HI LG + Y + GL + + V+ FIP E AL+ P Sbjct: 271 EGARRDALMKQHVQAVRDHITALGSRAYWE--GLDASPEMVIAFIPSESLVSSALEADPS 328 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 ++ A + L SP TL L+T+A W+ E + +A+Q+ D + +L+ ++ + ++ Sbjct: 329 IMEFAFSRRVALSSPVTLWSVLKTVAFSWQQEVLTEDAKQLFDLSRELHARLATSGEHIA 388 Query: 391 AIGQSLDKAQDNYRQAMKKL 410 +G+SL A +Y + + L Sbjct: 389 KLGRSLTGAVGDYNRVVGSL 408 >UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacteria RepID=C7MET8_BRAFD Length = 399 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 81/293 (27%), Positives = 144/293 (49%), Gaps = 6/293 (2%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L L+P+ L R + S L + L Q + LT AL+ Sbjct: 68 LQRTLAPITATLTQLERSLARSEAARIDAEGALRSHLSQLAQRAQSLETGTSALTAALRA 127 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQV-SIENDARSRMQPDVIVRLPQGKDVVID 256 +G WGEV L R++EA+G+ E ++ Q+ D +PD++V L + VVID Sbjct: 128 PT-ARGRWGEVQLRRIVEAAGMLEHVDFTEQLPGTRADGEKGQRPDLVVHLAGDRHVVID 186 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK + AY D + + H ++R+H+ ++ K Y + G T ++ ++F+P Sbjct: 187 AKAPMDAYLDATEETDPARAAARRKAHAKALRHHVGVVSSKAYWKALG-DTPEFTVLFVP 245 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 + AL+ PEL+ +A ++++ SP TL+ LRT+A+ WR + +R+A+++ D Sbjct: 246 SDGVLAAALETDPELLEDAFARDVVIASPATLVALLRTVAHTWRTDALNRDAREVLDAGR 305 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +L+ ++ F + +G+SLD + + +A+ L S V+ A F LG+ Sbjct: 306 ELHHRLGTFTGHLGKVGRSLDSSVAAFNEAVGSLQS---RVMVTARKFEELGL 355 >UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C5F2G6_9HELI Length = 451 Score = 122 bits (306), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 16/306 (5%) Query: 132 EQNRQSLNSLLSPLREQLDGFR-RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 E +++ L+S+ +P+RE + ++ + V + EA I+N+ + + Q A Sbjct: 153 EDSKKILDSVFNPVRESMKEYKDKLVANEIKLEAN--------IKNMFAYSQAIGQNADK 204 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L + LKGD K +GN+ E+ L VLE SGL G +Y+ Q N S +PD +V L + Sbjct: 205 LAQILKGDKKIRGNFAEIQLKNVLEHSGLVAGEQYKLQEHF-NFEGSGYRPDAVVYLDKH 263 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 K ++ID+K L N + E+ QE + +++N I L +K Y T ++ Sbjct: 264 KSIIIDSKFPLPN-----NFSFESLNENVCQEIVRNLKNRIDELAKKPYANFEA-HTYEF 317 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 VL+FIP + LAL + A + L +P TL +AL+TI W Y + Sbjct: 318 VLLFIPYQNILDLALSVDSGIYQYAYSKKVYLTTPQTLFMALKTIEVSWVYIQSDEKVMK 377 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 + K YDK +D + +++ + KL SGRG++ ++ E+ + LG + Sbjct: 378 AFEEIGKFYDKFVGVAEDFERLKGLIERLGKQSDELDSKLLSGRGSLASRFESLKKLGAK 437 Query: 431 IKREIN 436 ++++ Sbjct: 438 TAKKLS 443 >UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AV49_TSUPA Length = 361 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 82/269 (30%), Positives = 143/269 (53%), Gaps = 11/269 (4%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 + ++L+PLR+ LD + + L +I + + + + E L A+K Sbjct: 48 VGAMLAPLRQTLDALGHEFAVAERSRVAAFAGLREQIGTVARTSEALRAETATLRSAMK- 106 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVS--IENDARSRMQPDVIVRLPQGKDVVI 255 + +G WGE+ L RV+E +GL ++ TQV+ + +D R++PDV+V L G+D+V+ Sbjct: 107 SSTVRGRWGELQLERVVELAGLSRHCDFSTQVAGVVGDD---RVRPDVVVHLAGGRDLVV 163 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 DAK+ L AY + A + L +H R+H+ L + Y G + + V+MF+ Sbjct: 164 DAKVPLDAYLQVLEAPP-AEHAALLADHARRFRSHVVQLAGRRYWDAVG--SPELVVMFV 220 Query: 316 PVEPAFL-LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 P E AFL AL P+L+ AL N++L +PTTL+ LR +A WR +A++I Sbjct: 221 PAE-AFLDAALQVDPDLLEFALNRNVVLATPTTLVAMLRAVALAWRQHALGEDAERIHAL 279 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 +L +++ + + S++G +L +A D + Sbjct: 280 GRELSERLDVLNNHFSSLGSALTRAVDAF 308 >UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actinomycetales RepID=C1YHK2_NOCDA Length = 466 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 100/379 (26%), Positives = 184/379 (48%), Gaps = 24/379 (6%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMI-----NSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 AD R R ++ D+ R + + QR E E + + +DE+ R Sbjct: 26 ADARAAQERAAYVEEQLADRFRALSAQALDQTNQRFMELAEGRLRAVSAEAGGDLDER-R 84 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +++ ++ PL LD RQ++++ A L ++ +++ + ++ + +L AL Sbjct: 85 RAVERMVEPLTRTLDRVERQLREADAGRAAAHAELAKQVEYVREGSERLRDQTQSLVTAL 144 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 + + +G WGE+ L RV E +G+ ++E Q + + +R +PD++VRL GK++V+ Sbjct: 145 R-RPEARGRWGELQLRRVAELAGMGSHCDFEEQAATRDGSR---RPDMVVRLAGGKNIVV 200 Query: 256 DAKMTLVAY-ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LPGLRTLDYVL 312 D+K+ L AY + ++ R L+ H +R H+ L K Y P ++V+ Sbjct: 201 DSKVPLAAYLDAVEAGAEEAARH--LRVHARHLRTHVDQLAAKAYWSAFTP---APEFVV 255 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +FIP E AL+ PEL+ A+ + + +PTTL+ LRT W+ E S NA+ + Sbjct: 256 LFIPGEAFLAPALEYDPELLEYAMGRRVHIATPTTLISLLRTAQYAWQQEALSENARAVF 315 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV--- 429 D +L++++ + +G++L + Y Q + L S VL A F LG+ Sbjct: 316 DLGKQLHERLGTLGGHVEGLGRALTRTVSAYNQTVGSLES---RVLVTARRFGELGLVDG 372 Query: 430 EIKREINPDLAEQAVSQDE 448 E+ R + + +AV+ E Sbjct: 373 ELDRPVGVEERPRAVAAPE 391 >UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBX5_MICLC Length = 419 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 91/308 (29%), Positives = 146/308 (47%), Gaps = 21/308 (6%) Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 S L+PL ++L + QV A + L ++R + + + +L LK Sbjct: 86 STLAPLGQRLAALQEQVSVLERDRASQFGRLGEQLRAAAATDRDLLNQTTSLMATLK-ST 144 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKM 259 +G+WGE L RV+EA+G+ ++ Q ++ R++PD++V LP GK + +DAK Sbjct: 145 SARGHWGEAQLRRVVEAAGMLHHVDFTEQATLSGRDGERLRPDLVVSLPGGKAMAVDAKA 204 Query: 260 TL-----VAYERYFNAEDDYTR-ESALQEHIASVRNHIRLLGRKDYQQLPGL-RTLDYVL 312 + E+ Y R ++ +H A+VR H+ L K Y GL + + VL Sbjct: 205 PIGDALAAEALADEPGEEAYERRQALAAQHAAAVRRHVDQLSAKSYWA--GLEHSPELVL 262 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 F+P E ALD P L+ A N+ LV+P +LL AL+++A WR + + NA + Sbjct: 263 CFLPAESLLAAALDADPGLLDHAFSRNVALVAPVSLLTALKSVAYAWRQDTLAENAHTVV 322 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK 432 A LY+++ + +G SL A D Y Q + + S VL A Sbjct: 323 ASAKDLYERLGTLGTHLDRMGGSLKTAVDRYNQLVGNVES---RVLPAARRL-------- 371 Query: 433 REINPDLA 440 RE++P LA Sbjct: 372 REVDPGLA 379 >UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=B8HC96_ARTCA Length = 428 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 98/329 (29%), Positives = 162/329 (49%), Gaps = 32/329 (9%) Query: 110 RLSEQFENLA-----NRIFEHSNRRVDEQNRQSLNSL--LSPLREQLDGFRRQVQDSFGK 162 RLSE A R+ NR + E Q + L L+P+ E+L ++QV Sbjct: 60 RLSEVSAQFAAADAERRLLAAQNRELGEARSQDGSVLRALAPVAEKLTAVQQQVALLERD 119 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 ++ L +++ + + Q+ + L AL+ N +G WGEV L RV+EA+G+ Sbjct: 120 RVEQYGQLAQQLQEARLSDEQLMRSTHALESALR-SNSARGQWGEVQLRRVVEAAGMLRH 178 Query: 223 YEYETQV-SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY----------------- 264 ++ QV S +D R PD++V+LP K +V+DAK+ L AY Sbjct: 179 VDFVEQVHSAGSDTTVR--PDLVVQLPGEKILVVDAKVPLSAYLEAQEMGASAVHLAQHA 236 Query: 265 ---ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 + D ++++ L H ++R H+ LG K Y +PG + + V+ FIP E Sbjct: 237 DARPAALSGSDRRSQQALLAAHAKALRAHVDALGNKRYWDIPG-NSPELVVCFIPAESIL 295 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL+ L+ AL N++L SP TLL L+++A WR + + NA+++ D A +LYD+ Sbjct: 296 AAALEADAGLLDHALSKNVVLASPGTLLAVLKSVAFTWRQDVLTDNARELFDLARQLYDR 355 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 M ++++ +G SL + D Y + L Sbjct: 356 MGTLGENVTKLGSSLKTSVDRYNSLVGTL 384 >UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID=A9WPD8_RENSM Length = 378 Score = 118 bits (296), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 75/269 (27%), Positives = 143/269 (53%), Gaps = 3/269 (1%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L+P+ E+L +RQV ++ L+ ++ + + + + Q NL +L+ Sbjct: 74 LAPVSERLGDVQRQVTLLERDRVEQYGQLSQQLNDAKDADRLLLQTTQNLASSLR-STSA 132 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGEV L RV+E++G+ ++ QV ++ +PD+IVRLP GK++++DAK+ L Sbjct: 133 RGRWGEVQLRRVVESAGMVAHVDFSEQVQ-QSGIDGVQRPDMIVRLPGGKELILDAKVPL 191 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 A+ + A + +L +H +VR+HI L K Y Q + + V+ F+P E Sbjct: 192 SAFLQAQEAGSERDAAISLNQHAKAVRSHIDALAAKKYWQ-GSPTSPELVICFLPAESIL 250 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL +L+ AL ++L SP +LL L+ +A WR + + +A+++ + +S+LY++ Sbjct: 251 SAALSADAQLLDYALGKGVVLSSPISLLAVLKAVAYSWRQDVLTESAKELFEVSSQLYER 310 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 + + + +G S+ + + Y + L Sbjct: 311 LATLGEHVGKLGASIRSSVEKYNTMVGSL 339 >UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPY8_9ACTO Length = 410 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 80/289 (27%), Positives = 146/289 (50%), Gaps = 12/289 (4%) Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 +N Q+L ++ PL +L +V K+A + + ++ + ++A+E +L Sbjct: 82 RNEQALLRMIEPLSARLKDMTERVASMQAKQAAQDAAVREQLSATASAHRELARETTSLR 141 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ--VSIENDA-RSRMQPDVIVRLPQ 249 AL + ++G WGEV L R++E++G+ + ++ Q V+ N A S +PD+ V LP Sbjct: 142 TALTSVS-SRGTWGEVELRRIVESAGMLKHTDFSEQQNVATTNGAGASAARPDMTVHLPG 200 Query: 250 GKDVVIDAKMTLVAYERY--FNAEDDYT---RESALQEHIASVRNHIRLLGRKDYQ-QLP 303 G + +DAK+ L A + D ++ R + EH +VR H++ L ++DY + P Sbjct: 201 GAHIAVDAKVPLTALLKAQEIEGTDQFSEARRSELVAEHARAVRAHVKELAKRDYPAEFP 260 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 G + +MF+P E AL P ++ +ALK+ + +P++LL LR++A +W Sbjct: 261 G--SPRITVMFLPTESLLSQALADDPTILEDALKSGVAPATPSSLLALLRSVAAVWSSAR 318 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 + AQ+I L ++ + + +G SL A NY + + L S Sbjct: 319 VTEEAQEILALGRTLVKRIGTVANHVDKLGGSLRSAVSNYNKTIASLDS 367 >UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Micrococcineae RepID=C7NKI3_KYTSD Length = 390 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 84/297 (28%), Positives = 147/297 (49%), Gaps = 24/297 (8%) Query: 142 LSPLREQLDGFRRQVQ-------DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRA 194 ++P++ L+ RQV + FG E ER L H + ++L+A A +L Sbjct: 77 VTPVQRSLERMERQVTALERDRVEQFG-EVGER--LRHVAASTERLDAATTSLAGSL--- 130 Query: 195 LKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV 254 + +G WGE L R++E +G+ +++ QV +D ++PD++V LP + VV Sbjct: 131 --ASSGVRGTWGETQLRRLVEHAGMLARVDFDEQVRAVSDHDREVRPDMVVNLPDDRVVV 188 Query: 255 IDAKMTLVAYERYFNAE--DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 +DAK + A+ A+ D+ R L +H ++R H+ L K Y RT +V+ Sbjct: 189 LDAKAPMTAF---LTAQEVDEADRPGLLTQHAKALRQHVDTLSGKAYWSA-FRRTPQFVV 244 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 F+P + AL P L +AL ++L SP T + LRT+A W+++ RNA+++ Sbjct: 245 CFVPTDATLAAALQADPALYDDALAKEVVLASPATTMALLRTVALTWQHDTVERNAEEVL 304 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +L++++ + +G+ L + ++Y Q + L S VL A F LG+ Sbjct: 305 LLGRQLHERLATTAGHLDQMGRQLTRTVESYNQLVGGLES---RVLVSARRFTDLGL 358 >UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=Propionibacterium acnes RepID=Q6AA88_PROAC Length = 406 Score = 114 bits (286), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 115/447 (25%), Positives = 197/447 (44%), Gaps = 71/447 (15%) Query: 6 MVYAVIAL-VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +V +I L +GVA+GWL A + +Q+ AE SAA Sbjct: 4 IVVGLIGLAIGVALGWLIAQLRTSQRIAEAT----------SAA---------------- 37 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 R T R+EAA++ A D+ L+ QF+ L+ + Sbjct: 38 -------------------RVATERLEAAEKIATDR--------DALATQFKALSAQSMA 70 Query: 125 HSNRRVDEQNRQSLNS---LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR----NL 177 N R + +++++ LL+P+ L+ R+ + QER +T +R + Sbjct: 71 DQNERATQSAQRTMSDAQRLLAPVSLALERLDRR----LAEVEQERTDMTASLREQVAGV 126 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + +E +L AL+ + +G WGE+ L R E +G+ E +++TQ + + Sbjct: 127 STAGESLRKETASLVAALR-KPQIRGAWGEMQLQRTAEVAGMLEHCDFQTQQTTTAQG-A 184 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +PD+ V+L + + +DAK L A+ +D ++ + VR HI L K Sbjct: 185 PQRPDMTVKLSGRRCIHVDAKTPLAAFLEAAQCDDAEEYDAQMARFARHVRTHIDQLSAK 244 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 Y + L + ++V+ F+P + AL P+L A + I+L SP+ L+ LRT+A Sbjct: 245 GYWRT-DLDSPEFVVCFLPSDALLQAALQEIPDLHEYANRRGIVLASPSVLIPMLRTVAL 303 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 WR E +R+A ++A L+ ++ ++ +G+SL Y A+ L + V Sbjct: 304 AWRQEAVARSATEVAALGRDLHKRLGTLAGNLDKMGRSLTSTVRAYNSALGSLET---RV 360 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAV 444 L QA F LGV +P E+AV Sbjct: 361 LVQARRFEHLGVTADDIASPAPIEEAV 387 >UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 Tax=Tropheryma whipplei RepID=Q83MS0_TROWT Length = 482 Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 80/267 (29%), Positives = 143/267 (53%), Gaps = 17/267 (6%) Query: 142 LSPLREQ-------LDGFRR-QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 L+P++E LD ++ Q Q E+Q + T T E+ + +++ +++ + LT Sbjct: 132 LAPVKESVKQLTQTLDLLKKEQTQTMVRLESQIKETRT-ELDDNRKITRELSVDTRALTE 190 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 L+G K G WGE L +L+ SG+ G +Y+ Q +++ SR +PD I+ P G ++ Sbjct: 191 TLRG-TKHAGIWGEQRLRELLQNSGMIRGRDYDLQPILDD---SRYRPDAIIHAPGGLEI 246 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ-QLPGLRTLDYVL 312 VIDAK L A+ + E + L++H SVR HI LG++ Y ++ G + + L Sbjct: 247 VIDAKAPLDAFLASVDCESTSETQKLLKKHAQSVRKHIAELGKRAYHNKIDGPK---FTL 303 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +F+P E A++ +L++ A K+NI +VSP L ++TI L ++ + +A++I Sbjct: 304 LFLPTEGLLRSAVEEDSDLLSYAFKSNIAIVSPVNLWAVVQTITYLCTQQNLAHSAKEIV 363 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKA 399 L ++ +S +G+SLDK+ Sbjct: 364 RLGESLIANVKSIAQHISELGKSLDKS 390 >UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJV5_KOCRD Length = 411 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 84/303 (27%), Positives = 148/303 (48%), Gaps = 12/303 (3%) Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 E L R+ R V +Q+ + L+PL +QL R V AQ+ + + Sbjct: 73 EQLEQRVESLEARAVQDQD---VMRALAPLNDQLSSVGRHVNQLERDRAQQFGAVAQALE 129 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 + + Q+ +L +L+ +G WGE+ L RV+EA+G+ ++ T+ ++ Sbjct: 130 AARTTDQQLLHATTSLEGSLR-STTARGAWGEMQLRRVVEAAGMTRHVDF-TEQTVRATE 187 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAY------ERYFNAEDDYTRESALQEHIASVRN 289 +PD+++ LP + VV+DAK + +Y + E++ R L H ++R Sbjct: 188 SGTQRPDMVINLPGAQTVVVDAKAPMSSYLDAQAVPADGSPENEQRRAQLLAAHAKALRA 247 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 H+ LG K Y + + V+ F+PVE A ALD L+ A + N+ LVSP +LL Sbjct: 248 HVNTLGTKKYWSAEE-NSPELVMCFVPVESALAAALDADASLLDHAARANVALVSPVSLL 306 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 +L+ +A WR + NA+++ + +LYD+M +S +G SL ++ + Y + + Sbjct: 307 ASLKAVAFSWRQATLTDNARELYRLSRELYDRMGSVGKHLSDMGGSLRRSVEGYNKLVGS 366 Query: 410 LSS 412 L S Sbjct: 367 LES 369 >UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7Y6_GEMAT Length = 496 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 10/248 (4%) Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 ++ +G +GE L R LEA+GL+E Y Q ++ + +PD ++ LPQG+ +V+D+K Sbjct: 217 SQVRGRYGEWTLQRALEAAGLQERVHYVMQPALRGE-EGLFRPDAVLLLPQGRAIVVDSK 275 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ-----LPGLRTLDYVLM 313 L +A + + L H ++R HI L K Y +P LD VL+ Sbjct: 276 APLQHLLDAQHASSQSEKSALLDRHAKALRLHIDQLASKSYPARVSAVVPDRVLLDGVLL 335 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P + A R P+L+ A + LVSP +LL+ L + LWR + + + A +I Sbjct: 336 FVPADAVLDAAFRRDPKLLQHAASQQVHLVSPASLLIVLSAVEQLWRQDGRDQRAAEIEK 395 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + L ++ + + + + ++L Y L S +L A LGV R Sbjct: 396 IGADLLGRLGVVLGHVCHVQRALSDCVTAYNALTGSLES---RLLPIARRMEELGVR-TR 451 Query: 434 EINPDLAE 441 E P++ E Sbjct: 452 EAIPNIGE 459 >UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y6_9ZZZZ Length = 376 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 9/231 (3%) Query: 176 NLQQLNAQ---MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 NL+ N Q + + L L K +G WGE ++ +L+ GL EG Y Q ++ Sbjct: 113 NLEATNTQTKDLTDTTVKLREILSSSQK-RGQWGERIVEDILDVIGLIEGINYTKQAVVD 171 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 + R PD LP+ K + +D K L YE+Y + ED+ + + + + V+ H++ Sbjct: 172 SGER----PDFTFILPKEKTINMDVKFPLAHYEKYIDTEDEQVQINEKKSFLKDVKKHVK 227 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 + +++Y P TLDYVLM +P E + +I AL+N ++L SP TL L Sbjct: 228 DITKRNYID-PASGTLDYVLMLVPNESIYSFINKEDSGIIDFALQNKVLLCSPLTLYAIL 286 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 I R A + S + +++ M +G+S+ A+ +Y Sbjct: 287 SLINQATRNFEIEEKASDVMALLSTFKSQWEKYVEKMDKMGRSISTAKADY 337 >UniRef50_UPI0001910984 DNA recombination protein RmuC n=1 Tax=Salmonella enterica subsp. enterica serovar Typhi str. E98-0664 RepID=UPI0001910984 Length = 63 Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 49/61 (80%), Positives = 52/61 (85%) Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAV+QDEEYRLRS+PE DE Y D+ Q Sbjct: 1 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVTQDEEYRLRSIPEGRQDEHYPNDERVKQ 60 Query: 473 Q 473 Q Sbjct: 61 Q 61 >UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK07_9BACT Length = 377 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 24/273 (8%) Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 + G ++ + F + AQ+ H+ L + A +L +AL + +G WGE Sbjct: 106 MTGMEKEREARFSEIAQQIKNTVHQTEKLSDVTA-------SLNKAL-ASSAERGRWGER 157 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 + ++ +G++E Y+ Q ++ N +R PD LPQG V +D K L +Y + F Sbjct: 158 MALDIIRTTGMKEKINYDVQKTMANGSR----PDFTFYLPQGFCVHMDVKFPLDSYLK-F 212 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDY--QQLPGLRTLDYVLMFIPVEPAFLLALD 326 +E+ +E ++ I VR I+ + + Y QQ TLD +L+FIP E + + Sbjct: 213 CSEEGAGKEPHIKNFIRDVRQKIKDVKTRGYIDQQE---NTLDVMLLFIPNESVYEFIYE 269 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTI-ANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 + P+++ A++ ++L SP +L L I ++ + +S + + + K Y + F Sbjct: 270 KDPQIMDIAMEAGVILTSPLSLFAVLAVIRQSVENFAFESTSGEMLK-LFGKFYQQWDKF 328 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 + +G+ +D+AQ +Y + L S R N+L Sbjct: 329 TAKLEMVGKKIDEAQKSYDE----LISTRRNML 357 >UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J2_9ZZZZ Length = 343 Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 81/275 (29%), Positives = 125/275 (45%), Gaps = 21/275 (7%) Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 R + + + +G WGE + V G E Y Q ++ D SR PD + +P+GK Sbjct: 86 RDILANTQVRGQWGERMAEDVFRLIGFVEAVNYTKQTTVA-DGHSR--PDFTILMPEGKK 142 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 + +DAK L Y +Y AE + + + I VR+ R + +DY P TLDYVL Sbjct: 143 LNMDAKFPLTNYMKYVEAESEQEAQEYSRAFIRDVRDRAREVVGRDYIN-PDDNTLDYVL 201 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +FIP EP + +++ EAL+N ++L SP +L L I + + + +I Sbjct: 202 VFIPNEPMYHYIQQHGADVVEEALRNQVVLCSPISLFAILSIIRHALDNFAIEQASDEIL 261 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG---- 428 + + F+D M +G+ ++ AQ A + L R L R LG Sbjct: 262 SELAVFDRQWGNFVDQMETVGRRMESAQ----TAFESLKGTRTRALD-----RPLGRIRD 312 Query: 429 VEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 + +R I PD E DE + S+PE P DE Sbjct: 313 IRKRRNI-PDALEDGA--DEADDVMSLPE-PADET 343 >UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q5ZWX9_LEGPH Length = 420 Score = 85.1 bits (209), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 106/423 (25%), Positives = 198/423 (46%), Gaps = 50/423 (11%) Query: 4 SIMVYAVIALVGVAIGWLFASY---QHAQQK--AEQLAER--EEMVAELSAAKQQITQSE 56 S+ ++ IAL +A+ +L + + AQQK EQL ER + ++++L ++QS Sbjct: 6 SVTLFEGIAL-AIALQFLLLFWVLIKQAQQKKLTEQLGERIQQALISQLHQLHIDLSQS- 63 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI-RQMINSEQRLSEQF 115 ++ + +N ++ Q A QQ D I RQM + ++++ F Sbjct: 64 -YQTSQQFINEKIAQGQL-----------------ATQQLISDAIQRQMADVREQMTHSF 105 Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQVQDSFGKEAQERHTLTHEI 174 ++ A+ + H + + E+ R LN+L + +L +GF + S + +R T+ E Sbjct: 106 KHHASSLTSHL-QLLTEEIRNHLNTLTQQVNHKLTEGFEKT--SSTFIDVVKRLTIIDEA 162 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 Q+ +++ ++L L D K +G +GEV L+ ++ S + Y+ Q ++ N Sbjct: 163 ---QKKITELSSHVVSLQDVL-VDKKARGAFGEVQLSTLI--SNMLPSASYQMQYTLSNQ 216 Query: 235 ARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYERYFNAEDDYTRESALQEHI-ASVRNHIR 292 R+ D ++ LP+ ++VIDAK L Y+R N++ T +LQ+ ++ HI+ Sbjct: 217 KRA----DCVLFLPEPTGNIVIDAKFPLETYQRLINSDALSTDRKSLQQQFRQDIQKHIK 272 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 + K +P T D +MFIP E F P+LI + K + LVSP+TL+ L Sbjct: 273 DIAEKYI--VPN-ETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLVSPSTLMAVL 329 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ---AMKK 409 T + + + + I L + + F M + + +D A + + + KK Sbjct: 330 TTARAVLKDDATRKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEVNTSAKK 389 Query: 410 LSS 412 ++S Sbjct: 390 ITS 392 >UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M651_9BACT Length = 439 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 87/296 (29%), Positives = 144/296 (48%), Gaps = 32/296 (10%) Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN---RIFEHSNRRVDEQNRQSLNSLLS 143 T +ME+ ++H D Q+++ +QRL EQ LA R+ ++RRVDE RQ+++ L Sbjct: 91 TRQMESLERHTTD---QLLSVQQRLGEQETKLAEALARLESENSRRVDEL-RQAVSERLE 146 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 R++ DSF AQ L R L ++ +A + +L R L G KT+G Sbjct: 147 TT------LSRRLGDSF---AQVSGQLEAVQRGLGEMQG-LAGDVGDLQRTLTG-VKTRG 195 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDA 257 WGEV L +L S + +YE V+++ D+ R+ D +++P G + +DA Sbjct: 196 TWGEVQLESLL--SQILAPAQYERSVALDPDSAERV--DFGLKIPTGDPDEPPLWLPLDA 251 Query: 258 KMTLVAYERYFNAED--DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 K L +YER A + D E+A + + + RK Y + P T D+ L+F+ Sbjct: 252 KFPLASYERLLAARERGDADGEAAGRRELIKALDLQAASVRKKYVRPP--VTTDFALLFL 309 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 P E + AL L + ++ ++ V PTTL L ++ +R SR + ++ Sbjct: 310 PSESLYAEALRDPSTLPSLQERHRVVPVGPTTLAALLNSLRLGFRALAISRRSGEV 365 >UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6U8_9RHIZ Length = 390 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 74/261 (28%), Positives = 125/261 (47%), Gaps = 33/261 (12%) Query: 141 LLSPLREQLDGFRRQVQDSF---GKEAQERHTLTHE----IRNLQQLNAQMAQEAINLTR 193 L S L +LDG V S G E ++ + E I + Q Q+A I+ + Sbjct: 96 LTSTLAGRLDGLTSSVGRSIMATGSETKDTLSALGERLAIIDDAQNRIGQLA-SGISKLQ 154 Query: 194 ALKGDNKTQGNWGEV----VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 + GD +++G +GE+ ++ L A+G Y Q ++ N R PD ++ +P Sbjct: 155 DILGDKQSRGAFGELRMQTIVADALPANG------YRMQATLSNGKR----PDCLIEMPN 204 Query: 250 G-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 G +V+DAK L AY AE ++ A+ + HIR + K +P TL Sbjct: 205 GAPPLVVDAKFPLDAYAALSAAETPEAKQFAMSRMRRDMDVHIRAVSAKYL--IPN-ETL 261 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR----YEHQ 364 D LMF+P E F L + P++I +A + +++VSPT L+++++ I NL + E Sbjct: 262 DTALMFVPSETIFALLGESFPDIIQKAFRARVVIVSPTLLMLSIQVIQNLLKDARVREEA 321 Query: 365 S---RNAQQIADRASKLYDKM 382 S R Q + + ++L D++ Sbjct: 322 SRIQRETQHLGEEIARLNDRV 342 >UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q28JZ7_JANSC Length = 387 Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 74/255 (29%), Positives = 118/255 (46%), Gaps = 40/255 (15%) Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRA----LKGD----------NKTQGNWGEVVLTR 212 R T T R+L +L ++ Q I+ +A L GD + +G +GE+ L Sbjct: 109 RGTSTRTARSLGELQQKLEQ--IDRAQAKIEKLSGDVLGLQDILSNKQRRGMFGEIQLND 166 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-VVIDAKMTLVAYERYFNAE 271 ++ SG Y Q ++ N R+ DV+VRLP +VIDAK L AYE NA+ Sbjct: 167 IV--SGALPPDAYGFQATLSNGKRA----DVLVRLPNPPGPIVIDAKFPLEAYEALMNAQ 220 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 + AL+ A+VR HI+ + K + T D LMF+P E + R PE+ Sbjct: 221 GPEDQLRALKALGAAVRVHIKAISEKYIIEG---ETADGALMFLPSEAVYAELHARLPEV 277 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLW---RYEHQS-----------RNAQQIADRASK 377 + + + +VSPTT + L T+ + R Q+ R+ + + +RA K Sbjct: 278 VRDGFDARVWIVSPTTCMATLNTMRAVMKDARMREQAGEIRKALRQLHRDVEIVGERAGK 337 Query: 378 LYDKMRLFIDDMSAI 392 L +R+ +D++ I Sbjct: 338 LEAHLRMAGEDVAGI 352 >UniRef50_C7MYN0 Uncharacterized conserved protein n=4 Tax=Actinomycetales RepID=C7MYN0_SACVD Length = 305 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 4/149 (2%) Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G GE VL A GLREG + Q + ++ PD+++ + G+ V +DAK +L Sbjct: 69 RGELGERVLVETARALGLREGLHFTVQTDVAGGGAAK--PDMVLMVGGGRTVPVDAKASL 126 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 + +D R AL+ H+ ++R+ L K+YQ+ + +MF+P + A Sbjct: 127 ACWAEAVETDDPEERLDALRVHVRNLRSRAAELSGKNYQRWAD--AIYGTVMFVPSDAAV 184 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLV 350 + ALD PEL+ L + L PT V Sbjct: 185 VAALDTDPELLRWLLDRRVFLCGPTGFAV 213 >UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B6J7N4_COXB1 Length = 445 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 84/316 (26%), Positives = 150/316 (47%), Gaps = 35/316 (11%) Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 IR+ +++ L+ ENL NR+ + ++ + Q R L + Q+D R++ + F Sbjct: 117 IREQVSAT--LTAHAENLGNRVDKLTS---ETQER------LKEISGQVD---RKLTEGF 162 Query: 161 GKEAQERHTLTHEIRNL------QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 K + T T ++ L Q+ +++ ++L L D +++G +GEV L+ ++ Sbjct: 163 EKTTE---TFTDVVKRLTIIDEAQKKITELSTNVVSLQEVL-CDKRSRGAFGEVQLSNLI 218 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYERYFNAE-D 272 + L E + Y Q ++ N+ R D I+ LP+ ++VIDAK L +Y++ N + Sbjct: 219 H-NMLPESH-YALQHTLTNNKRC----DCILFLPEPTGNIVIDAKFPLESYQQIHNEKLS 272 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 + R A ++ + +R HIR + K +PG T + +MFIP E F P+LI Sbjct: 273 ESERAQAEKQFRSDIRKHIRDIAEKYI--VPG-ETAEGAVMFIPAEAVFSEIHAHYPDLI 329 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A K+ + LVSPTT++ L T + + + I L F D M + Sbjct: 330 EIAHKSRVWLVSPTTMMAILTTARAVLKDAATRKQVHIIQKHLIMLSKDFDRFQDRMDKL 389 Query: 393 GQSLDKAQDNYRQAMK 408 +D AQ++ + K Sbjct: 390 AHHIDLAQEDVSKVHK 405 >UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH n=63 Tax=Alphaproteobacteria RepID=B2SC22_BRUA1 Length = 407 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 78/329 (23%), Positives = 149/329 (45%), Gaps = 44/329 (13%) Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIR-----------NLQQLNAQMAQEAINLTR 193 +RE+LDG ++ + ++ + H +++ N+Q L Q+ Q + Sbjct: 100 IRERLDGMTHRIGQTMTEQTRSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQ-----LQ 154 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ-GKD 252 A+ + +T+G +G+ + ++ A GL +G YE Q ++ N R PD +VR+P Sbjct: 155 AILANKQTRGAFGQSRMEAII-ADGLPQGA-YEFQATLSNSTR----PDCLVRMPNNAPS 208 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 +VIDAK L A+ E R++A+ + + HI+ + D +PG T D Sbjct: 209 LVIDAKFPLEAWNAMRETEQPEARKAAVAQFRRDMEIHIKDVS--DKYLIPG-ETQDTAF 265 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +F+P E F + LI A + +++VSP+ L+++++ I + + A I Sbjct: 266 LFVPSESIFADIHEHFEALIQRAHRARVVVVSPSLLMLSIQVIQAILKDARMREQAHVIQ 325 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK 432 +L ++D+ + + + K Q ++ QA K + ++L + G +I+ Sbjct: 326 GEVIRL-------MEDVGRLDERVRKLQTHFIQANKDID----DILVSSSKVTKRGAKIE 374 Query: 433 R-EINPDLAEQAVSQDEEYRLRSVPEQPN 460 E P AE E R ++ P +P Sbjct: 375 ALEFGPPPAE------EPSRPQARPAEPG 397 >UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQV3_9MOLU Length = 339 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 53/223 (23%), Positives = 109/223 (48%), Gaps = 15/223 (6%) Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 IN + + K++GNWGE L +L +ETQ S++N DV +++P Sbjct: 103 INALNDIMVNKKSRGNWGEYQLNNLLSVYAGDNQSIFETQYSLKNGYIG----DVALKIP 158 Query: 249 QGKDVVIDAKMTLVAYERYFN---AEDDYTR-ESALQEHIASVRNHIRLLGRKDYQQLPG 304 K ++ID+K L + + + AE+D + ESA ++ I + HI + +K Sbjct: 159 GEKVLIIDSKFPLENFRKLDSVESAENDIKKFESAFKQDI---KKHINDISKKYITS--- 212 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 T++ +MFIP E ++ + ELI A +++L PTTL+ + T+ N+ + ++ Sbjct: 213 -ETIENAVMFIPSEAIYMEVCAKYSELIEYAHHKHVLLTCPTTLIGVVFTLINITKDFNR 271 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 +++ + + +Y+ + + + + +++K Y++ Sbjct: 272 NKHIKSLEKEIVAMYNDSQRMMTRLEGLSNTIEKLDKCYKEVF 314 >UniRef50_Q2NJ26 RmuC family protein n=5 Tax=Candidatus Phytoplasma RepID=Q2NJ26_AYWBP Length = 361 Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 37/272 (13%) Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQE-RHTLTHEIRN----LQQLNAQMAQEAINLTRAL 195 ++ L ++++ Q QD KE ++ R LT + N L++ NA QE N+ + L Sbjct: 58 VICRLDDKINNLNHQSQDILTKEIKDTRQHLTSNLENSLKVLREQNASGFQEVQNIHKLL 117 Query: 196 KGDNKTQGNWGEVVLTRVLE-ASGLREGYEYETQVSIE--NDARSRMQPDVIVRLPQGK- 251 ++KT G GE +L R+LE S ++ +E Q ++ N+ +R++ DV+ + GK Sbjct: 118 CQNDKT-GQAGEFLLARILENISHFKDKLVFEKQYLMKKTNNNGNRLKVDVMCK-GYGKF 175 Query: 252 -DVVIDAKMTLVAYERYFNAEDDYTRES-----ALQEHIASVRNHIRLLGRKDYQQLPGL 305 + ID+K + Y NA + ++E I V+ ++ ++D Sbjct: 176 IQIPIDSKFPTTDFLSYINATFNQIELKNRFLFHVKERIKEVQKYV---SKED------- 225 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR-YEHQ 364 Y +MFIP E F ++ PE+I+ A K+N+++ SP+ LL L ++ ++ +E Sbjct: 226 -NCPYAIMFIPSESIFA-QINCDPEIISYAFKHNVIITSPSILLAILNSVDYYFQIFESV 283 Query: 365 SRNAQQI-----ADRASKLYDKMRLFIDDMSA 391 N +++ +A K +DK+ FI D+ A Sbjct: 284 QNNEEKLECIENVLQAMKNFDKV--FICDLKA 313 >UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaproteobacteria RepID=A9ZIQ0_COXBU Length = 374 Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 75/262 (28%), Positives = 133/262 (50%), Gaps = 35/262 (13%) Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 IR+ +++ L+ ENL NR+ + ++ + Q R L + Q+D R++ + F Sbjct: 98 IREQVSAT--LTAHAENLGNRVDKLTS---ETQER------LKEISGQVD---RKLTEGF 143 Query: 161 GKEAQERHTLTHEIRNL------QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 K + T T ++ L Q+ +++ ++L L D +++G +GEV L+ ++ Sbjct: 144 EKTTE---TFTDVVKRLTIIDEAQKKITELSTNVVSLQEVL-CDKRSRGAFGEVQLSNLI 199 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYERYFNAE-D 272 + L E + Y Q ++ N+ R D I+ LP+ ++VIDAK L +Y++ N + Sbjct: 200 H-NMLPESH-YALQHTLTNNKRC----DCILFLPEPTGNIVIDAKFPLESYQQIHNEKLS 253 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 + R A ++ + +R HIR + K +PG T + +MFIP E F P+LI Sbjct: 254 ESERAQAEKQFRSDIRKHIRDIAEKYI--VPG-ETAEGAVMFIPAEAVFSEIHAHYPDLI 310 Query: 333 TEALKNNIMLVSPTTLLVALRT 354 A K+ + LVSPTT++ L T Sbjct: 311 EIAHKSRVWLVSPTTMMAILTT 332 >UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1U3_ERYRH Length = 430 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 64/235 (27%), Positives = 116/235 (49%), Gaps = 14/235 (5%) Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA-SGLREGYEYETQVSIENDARSRMQPD 242 ++ E ++L L D KT+G +GEV L ++L + G + Y+ Q ++ R PD Sbjct: 183 LSVEIVSLQDVL-TDKKTRGTFGEVQLHQILASIFGDKNDRIYQMQYNLSPGVR----PD 237 Query: 243 VIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYT-RESALQEHIASVRNHIRLLGRKDYQ 300 ++ P+ +VID+K L Y R + + + R++A ++ + + HI + D Sbjct: 238 AVLFAPEPLGTLVIDSKFPLENYRRMIDKSLETSQRQNAERQFVLDCKKHIDAIA--DKY 295 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 +PG T D LMF+P E F +++ A + + LVSPTTL+ L TI + Sbjct: 296 IIPG-TTSDQALMFVPAEAVFATINAYHSDILDYAQRKRVWLVSPTTLMSTLTTIQTILV 354 Query: 361 YEHQSRNAQQIADRASKL---YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 + + A I D +L +D+ RL D++S +++++ + +K+SS Sbjct: 355 NLEREKYASVIHDELKRLNVEFDRYRLRWDNLSKHIENVNQDVKDLHITSRKISS 409 >UniRef50_B3CQE7 DNA recombination protein RmuC homolog n=2 Tax=Orientia tsutsugamushi RepID=B3CQE7_ORITI Length = 449 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 23/245 (9%) Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G E+ L +L+ASGLR Y++ Q ++ ++ R++PD ++ LP ++IDAK + Sbjct: 174 GMLAEITLENILKASGLRVKYDFIMQCNLTDENNMRLRPDALIFLPGDNLMIIDAKASKF 233 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG------LRTLDYV--LMF 314 + N + + +++ S+ H++ L K+Y Q R + + LMF Sbjct: 234 LIDMCNNNNNAAIHTAKVEKLRKSINLHLKNLSSKEYAQAIVDSCQFEARNFNNIITLMF 293 Query: 315 IPVEPAF--LLALDRQPELITEALKNNIMLVSPTTLLVALRT----IANLWRYEHQSRNA 368 +P E A L +DR E I ++ + NI V P+ L+ L I RYE+Q Sbjct: 294 LPTETAIENLSTIDR--EFIHKSWELNIFPVGPSGLMNMLSFAKFQIKEQMRYENQ---- 347 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + I + K+ + L + + ++ +Y Q +S N L++A+ + LG Sbjct: 348 KLILNEVEKVILSINLLTEYAHKLSSNVQGIVSSYDQFA---ASFNRNFLSKAKTIQQLG 404 Query: 429 VEIKR 433 +E K+ Sbjct: 405 IETKK 409 >UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC51_9FIRM Length = 273 Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 30/224 (13%) Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L++ + +QVQD +A + +L L ++N M + K +GN Sbjct: 18 LQKNFEYLLKQVQDVQKNQATSKMSLNQMEDYLYRMNQVMT------------NTKLRGN 65 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QGKDVVIDAKMTLVA 263 WGE L +L + Y Q ++ N + D LP K + ID+K + Sbjct: 66 WGEYQLDMLLSVYCGQNPSIYSMQYTLPNGKIA----DCAFHLPDTNKVLCIDSKFPM-- 119 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 E Y N ++D ++ L+ +++ HI + K + T+ Y L+F+P E + Sbjct: 120 -ENYLNLQED--MDTYLRPFKMNMKKHIDDVANK----YINMDTMPYALLFVPSEAIYQF 172 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTI----ANLWRYEH 363 + +L T AL+ ++MLVSPTTL+ + T+ + +R H Sbjct: 173 VCAKCDDLFTYALQKHVMLVSPTTLVAEVMTLLSSTKDFYRTSH 216 >UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B6JJP9_OLICO Length = 400 Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 14/233 (6%) Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +NL L Q + R + + + +G +G+ + +++ GL +G + Q ++ N+ Sbjct: 135 KNLTDLTTQ-----VTTLRDVLANKQARGAFGQARMEAIVQ-DGLPKGA-FAFQHTLSNN 187 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 R PD +V LP + + IDAK L A A+ D R+ A Q V H+ + Sbjct: 188 KR----PDCVVFLPDQRPLCIDAKFPLEAVTALREAKSDDARKLAAQRLRQDVMKHVSDI 243 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K L T D LMF+P E + D +++ +A + I+LVSP+ L++A++ Sbjct: 244 AGK---YLIAGETQDTALMFVPSESVYAEIHDGFDDVVQKAYRARIVLVSPSLLMLAIQV 300 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 + + + A QI + + D +S +G D+ ++ RQ + Sbjct: 301 MQQIMKDARMRDAADQIRTEVMNMMGDVERLRDRVSKLGSHFDQVSEDVRQVL 353 >UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDX5_9PROT Length = 356 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 10/180 (5%) Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 G+ K +GN+GE L R+L + YE Q + N R+ D + + + K + ID Sbjct: 134 GNVKLRGNFGEYRLERILSMIYGQNAAFYELQKHLPN---GRI-ADCALHIAKEKILCID 189 Query: 257 AKMTLVAYERYFN---AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 +K L +YE+ + D SA ++ A ++ H + K +P L T ++ ++ Sbjct: 190 SKFPLQSYEKIIATSASNDAAALASADKQLAADMKKHAADIAEK--YIIPPLST-EFAVL 246 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P E F+ +R P+++ + I SPTTLL L TI + E ++N + + D Sbjct: 247 FVPSEAVFVYVCERLPQVLEYCAQIGIFAASPTTLLALLGTIRTFIKDEVLAQNIKSVKD 306 >UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=Rickettsia RepID=RMUC_RICBR Length = 428 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 25/258 (9%) Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G E+ L +L++SGLR ++ Q + ++++PD ++ LP G +VID+K + Sbjct: 169 GLLAEITLENILKSSGLRSNLDFIMQYGLTTSDSTKLRPDALIFLPSGNLMVIDSKAS-- 226 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LPGLRTLD------YVLMF 314 ++ E D + + ++ H++ L KDY + L L + LMF Sbjct: 227 ---KFLVDEQDNSGNLS-----KTMNYHLKSLANKDYAENILADLNKKEQNYNNVITLMF 278 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH-QSRNAQQIAD 373 +P E A + P + +A +I V P+ L+ L + A +H +S N + I + Sbjct: 279 LPTEQAVEKVIAADPNFLQKAWGCSIFPVGPSGLMNML-SFAKFQITDHRRSENYKIIIE 337 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 KL + D IG +L NY K +S N +++ + + LG++ Sbjct: 338 EVRKLLSSIGTIADYSQKIGNNLHNMVTNYD---KFAASFNRNFMSRVKNIQKLGIDSGN 394 Query: 434 EINPDLAE--QAVSQDEE 449 + P E Q VS E Sbjct: 395 KTLPASLERYQIVSSKSE 412 >UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8T4_9RHOB Length = 413 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 69/288 (23%), Positives = 133/288 (46%), Gaps = 33/288 (11%) Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH-EIRNLQQ-------LNAQMA 185 +RQS L+ + ++LDG + + G E H TH + LQ+ N M Sbjct: 91 SRQS--DLMRVVNDRLDGLGK----TLGASVLETHRQTHASLTGLQERMALLDKANKTMG 144 Query: 186 QEAINLT--RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 + A +T + + D +++G +G+ + +++ + + +++ +S +R +PD Sbjct: 145 ELAGQVTDLQMVLNDKQSRGAFGQGRMEAIIDDALPPTSFSFQSTLS------NRSRPDC 198 Query: 244 IVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 ++ +P G +V+DAK L A+ +AE + A + H+ + K L Sbjct: 199 LIHMPTGAPPLVVDAKFPLEAFAAIKDAETKPELKEAANRFRKDISKHLEDIAGKYL--L 256 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 PG T D LMF+P E F + P+L +A + +++VSP+ L++A++ I ++ R Sbjct: 257 PG-ETQDTALMFVPSESLFAEIHEGFPDLTQKAHRLRVVIVSPSLLVLAVQVIQSVLRDA 315 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 A I KL + D+ + + + K Q+++ Q K L Sbjct: 316 RMREQAHLIQAEVGKL-------LLDVGRLTERVSKLQNHFAQTNKDL 356 >UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae RepID=B7QSN6_9RHOB Length = 419 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 24/217 (11%) Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-VVID 256 + +T+G +GE+ L ++ + + Y + Q ++ N R+ D ++ LP +VID Sbjct: 173 NKQTRGAFGEIQLNDIVSKALPADSYAF--QHTLSNGKRA----DCLIHLPNPPGPIVID 226 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K L Y+ NAE R SA ++ ++R HIR + K L G T D LMF+P Sbjct: 227 SKFPLEPYDALRNAETPEQRASAARQLKGALRAHIRAIAEKYI--LDG-ETADGALMFLP 283 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW---RYEHQS-------- 365 E + +++ E + +VSPTT + L T+ + R Q+ Sbjct: 284 SEAVYAELHANFADVVREGFAAKVWIVSPTTCMATLNTMRAILKDARMREQAGAIRTELG 343 Query: 366 ---RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 ++ +++ DR L + D++ I S DKA Sbjct: 344 LLHKDVERLGDRVGNLDRHFGMAAKDIAEIKISADKA 380 >UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales RepID=Q16CD2_ROSDO Length = 411 Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 80/361 (22%), Positives = 165/361 (45%), Gaps = 33/361 (9%) Query: 47 AAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMIN 106 AA + +E + +L V+ L + L L+ V+ Q +A ++ Q + Sbjct: 39 AAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSD----TQANAQTQVIQTV- 93 Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 E RL+ + + +R+ +++ R ++++L + ++E L G +Q S + QE Sbjct: 94 -EARLAAVQQQMQDRLADNAMR-----SQRALTDMQERMKETLHGSSKQTTTSL-TQLQE 146 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 R I Q +++ + ++L L + +T+G +GE+ L ++ + + Y Sbjct: 147 R---LASIDKAQDNITKLSGDVLSLQDILS-NKQTRGAFGEIQLHDIVSKALPNDSYAL- 201 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKD-VVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 Q ++ N R+ D ++ LP +VID+K L AYE+ A+ ++ + A+ + Sbjct: 202 -QHTLSNGKRA----DCLIHLPNPPGPIVIDSKFPLEAYEQLRAAKTEWDLKDAVAKMKT 256 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +V HI + K + G T D LMF+P E + PEL+ + + +VSP Sbjct: 257 AVTKHINDISEKYI--IEG-ETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIVSP 313 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TT + L T+ + + ++ ++A + +++ D+ + + + K ++RQ Sbjct: 314 TTCMATLNTMRAILKDA-------RMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQ 366 Query: 406 A 406 A Sbjct: 367 A 367 >UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6BU70_9PROT Length = 434 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 18/214 (8%) Query: 195 LKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV 254 L GD +++G +GE+ L +++ + + + Q S +N +R+ D ++ LP+ V Sbjct: 187 LLGDKRSRGAYGELQLESLVKNILPPDSFSF--QHSFKNGSRA----DCVLFLPEPTGTV 240 Query: 255 -IDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 +D+K + Y++ F++ + + A ++ VR HI + K +P T D + Sbjct: 241 AVDSKFPMENYQKMFDSSLSEPEKIKAEKQFKLDVRKHITDISTKYI--IPD-ETSDGAV 297 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 MF+P E F PELI ++L + + +VSPTTL+ L T + + + I Sbjct: 298 MFVPAEAVFAEIHAYHPELIQDSLNHKVWVVSPTTLMAVLNTARAVLKDVETRKQVHIIK 357 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 KL + F Q + K DN R A Sbjct: 358 AELGKLGKEFERF-------DQRMKKLADNIRMA 384 >UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE59_ACHLI Length = 364 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 65/271 (23%), Positives = 126/271 (46%), Gaps = 16/271 (5%) Query: 150 DGFRRQVQDSFGKEAQERHTLTHEI-RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 +GF Q D E+ T+ +N++ L+ +N ++ D K +G +GE+ Sbjct: 92 EGF--QSSDKLFSSMLEKLTIIDTTQKNIENLSGH-----VNDLKSYLSDKKLRGMYGEL 144 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QGKDVVIDAKMTLVAYERY 267 L ++LE G +T + ++ ++ D IV ++ ID+K +L Y R Sbjct: 145 QLYQILENVF---GENNKTLFTKQHKLSNQTVVDAIVYGSGDALNIPIDSKFSLENYIRM 201 Query: 268 FNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 +++ +D R++A + +++ HI + + + T DY LMFIP E F Sbjct: 202 YDSNLEDSERKNASKLFEQNIKKHIDDIASR---YIIKNETTDYALMFIPSEAVFSEIQA 258 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 L+ A K + + SPTTL+ L I + + + +NA+++ D +KLY+ RL Sbjct: 259 NYIHLVEYASKKKVWITSPTTLVYMLTMILVINQDLEKEKNAEKMLDEINKLYNDFRLVF 318 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 + + + + + + ++ R M ++ NV Sbjct: 319 ERFNTLEKDIQRLSESIRTLMIPMNRLNKNV 349 >UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2SRN1_MYCCT Length = 358 Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 14/226 (6%) Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 E + +LN+L + +Q + + + D + +E + +T+ I + + + Q L Sbjct: 60 EITKTNLNNLEKTVNKQKEDLTKSL-DKLEENIKEFNKITNNINTIDKKVDKSVQNINEL 118 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYE---YETQVSIENDARSRMQPDVIVRLP 248 + K ++KT+GN GE L +L + L E + ++TQ +N S + D I++ Sbjct: 119 SLIFK-NSKTRGNLGEFTLEWIL-TNVLGEKTDNGIWQTQYKYKN---SNVIVDAIIKTQ 173 Query: 249 -QGKDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 K + ID+K L + D Y A E +++N I+ L K + Sbjct: 174 INDKKIAIDSKFPLTKANILISENTDSYLYRQAEGEFKQTIKNMIKELNNK---YISNSE 230 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 + V+MFIP E F L + ++ +EA+KN I + SPTTL L Sbjct: 231 NVSSVIMFIPSEAIFELIWSKFTDIFSEAIKNKIWICSPTTLPAVL 276 >UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteurianus RepID=C7JFP3_ACEP3 Length = 422 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 40/232 (17%) Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG--------- 197 +QL RR V + EA E+ T R L+Q +A Q+A+ RA+ G Sbjct: 115 QQLASIRRAVTEQL-HEAVEQQMQTSFQRVLEQFSAM--QKAMGEVRAMTGQIGDLKRLF 171 Query: 198 -DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI---VRLPQGKD- 252 + KT+G WGE L +L+ L G YE+ V I N DV+ +R+P Sbjct: 172 SNVKTRGGWGEAQLRAILDDV-LPPGT-YESNVRIGNGN------DVVEFAIRMPVKSST 223 Query: 253 ---VVIDAKMTLVAYERYFNAED--DYTRESALQEHIASVRNHIRLLGRK---DYQQLPG 304 + +D+K AYER NA D D E A ++ S+ N +RL RK Y P Sbjct: 224 PPLLPVDSKFPTEAYERLLNAADEGDTAGEKAARK---SLENTMRLEARKISSKYIHPP- 279 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKN-NIMLVSPTTLLVALRTI 355 +T+++ ++++P + + R P LI + + +M++ P + LRTI Sbjct: 280 -KTVEFAVLYLPTD-GLYTEVARMPGLIDDLGRQFRVMVMGPALMPAMLRTI 329 >UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C7RC44_KANKD Length = 501 Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 23/262 (8%) Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 DGF + Q +F ++ +R L I + Q+ +++ ++L L D +++G +GEV Sbjct: 215 DGFEKTTQ-TF-QDVLKRLAL---IDDAQKKITELSSNVVSLQEIL-SDKRSRGAFGEVQ 268 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV-IDAKMTLVAYERYF 268 L ++ S + Y+ Q S N D + LP+ V+ +DAK L Y++ Sbjct: 269 LESLV--SNVMPTSHYKFQHSFSNGKI----VDCALFLPEPTGVIGVDAKFPLENYQKMV 322 Query: 269 NAE-DDYTRESALQEHIASVRNHIRLLGRK---DYQQLPGLRTLDYVLMFIPVEPAFLLA 324 + E R+ A + I ++ H+ + K D + G +MFIP E F Sbjct: 323 DVERSGPERDQAHKAFIKDIKKHVNDIASKYIIDQETAVG------AVMFIPAEAVFAEI 376 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 PEL+ A + + +VSPTT++ L T + + + E + I + L Sbjct: 377 HAHHPELVEFAQQQKVWMVSPTTMMALLTTASAVLKDEATRKQVHIIQEHLGYLSKDFGR 436 Query: 385 FIDDMSAIGQSLDKAQDNYRQA 406 F MS + + ++ D+ ++ Sbjct: 437 FRTRMSDLARHINNVSDDVKKV 458 >UniRef50_C1RMZ6 Uncharacterized conserved protein n=1 Tax=Cellulomonas flavigena DSM 20109 RepID=C1RMZ6_9CELL Length = 171 Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 3/95 (3%) Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A + N++L +PTTLL LRTIA WR + + NAQQ+ +L+ ++ ++ +G+ Sbjct: 4 AFERNVVLATPTTLLALLRTIAYAWRQDALAANAQQVLSLGKELHGRLATMGGHLARLGR 63 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 S+D A Y QA+ S VL A F L V Sbjct: 64 SIDAAAGAYNQAVGSFES---RVLVSARRFADLHV 95 >UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepID=A3RWT8_RALSO Length = 489 Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 70/247 (28%), Positives = 110/247 (44%), Gaps = 28/247 (11%) Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 R L ++ A +AQ +L + L + KT+G WGEV L +LE E Y+ + Sbjct: 216 RGLGEMQA-LAQGVGDLKKVLT-NVKTRGTWGEVQLEMLLEQMLTPEQYDKNVETVRGTG 273 Query: 235 ARSRMQPDVIVRLPQGKD--------VVIDAKMTLVAYERYFNAEDDYTRESAL---QEH 283 AR + +RLP D + IDAK YER +A++ E A +E Sbjct: 274 ARV----EFAIRLPGKTDADRDATVWLPIDAKFPKEQYERLLDAQERADAEGATVASREL 329 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA-LKNNIML 342 +VR + + K Y P T D+ ++F+P E + L R+P L E K + + Sbjct: 330 EVAVRKEAQTIHEK-YIAPPD--TTDFAILFLPTEGLYAEVL-RRPGLTDELQRKFRVTV 385 Query: 343 VSPTTLLVALRTIANLWR---YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 PTTL L ++ +R E +S Q+ + K F D ++A ++L++A Sbjct: 386 AGPTTLTAILNSLQMGFRTLALEKRSSEVWQVLGAVKSEFGK---FGDVLAATKKTLERA 442 Query: 400 QDNYRQA 406 N QA Sbjct: 443 VSNIEQA 449 >UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDE0_9SPHN Length = 437 Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 84/326 (25%), Positives = 148/326 (45%), Gaps = 36/326 (11%) Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQ 157 DKI Q+I E + S ++ +N Q L + + E+L G +++ Sbjct: 92 DKIGQLIEKNDERQEALRQAVS----DSLDKLRTENSQKLEKMRETVDEKLQGTLEKRLG 147 Query: 158 DSFGKEAQERHTLTHE-IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 +SF K +R H+ + +Q L + +L R L G+ K++G WGEV L +LE Sbjct: 148 ESF-KLVSDRLEQVHQGLGEMQNLATGVG----DLKRVL-GNVKSRGGWGEVQLGMLLED 201 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLP--QGKD----VVIDAKMTLVAYERYFNA 270 R+ ++ET V I + ++ +RLP G+D + IDAK Y+R A Sbjct: 202 MLTRD--QFETNVKIRPSSGEMVE--FAIRLPGRSGEDEPLWLPIDAKFPHEDYDRLLVA 257 Query: 271 EDDYTRESALQEHIASVRNHIRLLGR---KDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 ++ E + + A++ IRL + + Y P + D+ +M++P E F + R Sbjct: 258 QEAGIGED-VDKAAAALERAIRLQAKTISEKYVHPP--HSTDFAIMYLPTEGLFAEVI-R 313 Query: 328 QPELITEA-LKNNIMLVSPTTLLVALRTIANLWR---YEHQSRNAQQIADRASKLYDKMR 383 +P L E K+ +M+ PTTL L ++ +R E +S Q+ A ++K Sbjct: 314 RPGLAMELQSKHRVMVQGPTTLAALLTSLQMGFRTLAIEKRSSEVWQVLGAAKAEFEK-- 371 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKK 409 + +G+ LD A+ +A ++ Sbjct: 372 -YGQVWEKLGKQLDTAKRTVDEAGRR 396 >UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q0B0Y1_SYNWW Length = 450 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 89/350 (25%), Positives = 162/350 (46%), Gaps = 42/350 (12%) Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKI-RQMINSEQRLSEQFENLANRIFEHSNRR 129 S ++++ SL A + E M QQ+ D +QM + Q ++ E + I E R Sbjct: 81 SFKTLSDSLSARMVE----MGNLQQYQLDGFSQQMAHLTQSNEQKLEQMRGTI-EERVRE 135 Query: 130 VDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + ++N Q L + + + E+L +++ +SF K ER H + L ++ A +A Sbjct: 136 LQKENAQKLEQMRTVVDEKLHATLEQRLGESF-KLVSERLEQVH--KGLGEMQA-LASGV 191 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L + L + K++G WGEV L +LE E +Y + V+++ A + + V+LP Sbjct: 192 GDLKKVLS-NVKSRGTWGEVQLGNILEDILAPE--QYGSNVAVKKGAE---RVEFAVKLP 245 Query: 249 QGKD-------VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK---D 298 G D + IDAK L Y R A D +A+++ ++ N I+ ++ Sbjct: 246 -GPDKEGSPLWLPIDAKFPLEDYHRLLEAYDGADL-AAIEQAGKNLENRIKAQAKEICSK 303 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLVALRTIA 356 Y + P T D+ +MF+P E + L R+P L E L+ + I + PTTL L +++ Sbjct: 304 YIEPPA--TTDFAIMFLPTEGLYAEVL-RRPGLF-ENLRQDYRITVAGPTTLAALLNSLS 359 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 +R I R+ +++ + + G L+K + ++A Sbjct: 360 MGFR-------TLAIQKRSGEVWAILGAIKSEFGKFGMVLEKTRKKLQEA 402 >UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD6C Length = 302 Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 35/246 (14%) Query: 177 LQQLNAQMAQEAINLTRALKG---------DNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L + N + Q + + + G + K +G +GE L +L + YE Sbjct: 52 LNETNRSLGQSDVKINHMVDGMHEINVIMTNTKKRGTFGEYQLYHILSLYCGDNQHIYEE 111 Query: 228 QVSIENDARSRMQPDVIVRLP-QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q + N D + LP K ++ID+K + E Y D+ S E + Sbjct: 112 QYHLSNGKIG----DAALHLPGNTKVLIIDSKFPM---ENYLKIVDNPKDISYQNEFKKN 164 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 V+ HI + K + TL+ +MFIP E +L D +L A +++ SP+ Sbjct: 165 VKKHIDDISNKYITE----ETLEEAVMFIPSEAIYLYLCDECADLYDYAHNKKVLMTSPS 220 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL+ + T+ N+ + ++S N ++I + KL D+ D Y + Sbjct: 221 TLMGVVFTLINITKDFNRSENIKEIEKQIIKL--------------KSDTDRLDDRYGKV 266 Query: 407 MKKLSS 412 MK L++ Sbjct: 267 MKNLNT 272 >UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus lactis RepID=D2BLP2_LACLK Length = 434 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 100/416 (24%), Positives = 184/416 (44%), Gaps = 78/416 (18%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 Q AQ + E + + + SA + I W+ + +L N+ + L+ I+ SL Sbjct: 50 QLAQNRQELSSSLRSVNNDFSALTENINSKFDWQFK-DLQNSNEQKLEKISVSLVESTDR 108 Query: 86 VTTRM----EAAQQHADDKIRQMINS-EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 +++ E+ D K +++ +S ++RLS+ E VDE+ +++LN Sbjct: 109 TVSKLSELTESITAKFDHKFKELQDSNDKRLSQIQET------------VDEKLQETLNR 156 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 +S EQ+ + V++ G E+RNL A + +L + + G K Sbjct: 157 RISQSFEQVTLHLKNVEEGLG-----------EMRNL-------ASDVDSLQKVMTGV-K 197 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VVI 255 T+G GE+ L R+LE + +Y QV+I+ D + LP D + I Sbjct: 198 TRGIVGEIQLGRILEQ--MFTSSQYREQVNIQGGN----AVDYALILPGKSDDSELLLPI 251 Query: 256 DAKMTLVAYERYFNA-------EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 D+K + Y+R A E D TR++ +V+ + + K Y P +T Sbjct: 252 DSKFPMEDYQRLQMALESNDSLEIDKTRKALFN----AVKAQAKSISEK-YIVPP--KTT 304 Query: 309 DYVLMFIPVEPAFLLALDRQPEL---ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 D+ +MF+P E F+ ++ PEL I+ K N+ PTT+ L ++ ++ Sbjct: 305 DFAIMFLPTEGLFMEVVNN-PELYEQISRDYKVNV--TGPTTMTAVLNSLQMGFK----- 356 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS---SGRGNVL 418 QI +++++Y+ + + SL K Q+ +Q+ K++S + R NV+ Sbjct: 357 --TLQIEQKSAEVYELLGAVKTEFGKFEGSLKKVQERLQQSEKEISNLITTRTNVM 410 >UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6J3_9BACT Length = 490 Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 31/287 (10%) Query: 133 QNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 QN Q L+ + + E+L +++ +SF K+ ER H ++L ++ A +A + +L Sbjct: 174 QNAQKLDEMRQTVDEKLQSTLEKRLGESF-KQVSERLESVH--KSLGEMQA-VATDVGDL 229 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP--- 248 R L + KT+G WGE L +LE L E YE +++ + RS + V+LP Sbjct: 230 KRVLT-NVKTRGTWGEYQLGAILETMLLPEQYE----TNVKPNPRSESVVEFAVKLPGRD 284 Query: 249 -QGKDV--VIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 GK V IDAK YER A D E A ++ A V R + R Y Sbjct: 285 EAGKPVWLPIDAKFPKENYERLSAASLRADPVATEQAARDLAADVEKSARDI-RDRYISP 343 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN-NIMLVSPTTLLVALRTIANLWRY 361 P T D+ ++F+P E + R+P + + + ++L P+TL L ++ Sbjct: 344 P--HTTDFAVLFLPTE-GLYAEIIRRPGVADKIQREYRVLLAGPSTLAALLNSL------ 394 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 I R+S+++ + G+ L K Q +A K Sbjct: 395 -QMGFKTLAIQKRSSEVWKLLGAVKTQFGTFGELLAKVQKKLDEASK 440 >UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=C6XEK3_METSD Length = 451 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 26/239 (10%) Query: 147 EQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 E+LD GF++ D+F + + T+ + + L + + L GD +++G + Sbjct: 162 ERLDEGFKK-TNDTFVRVMERLATIDEAQKKIDGLTTNVVS-----LQELLGDKRSRGAF 215 Query: 206 GEV----VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV-IDAKMT 260 GEV ++ VL SG + Q + N R D + LP+ V +D+K Sbjct: 216 GEVQLEALVRNVLPNSG------FAMQHVLPNGTRV----DCALFLPEPTGTVAVDSKFP 265 Query: 261 LVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEP 319 L Y R + + R A ++ A V+ H+ + K +P + T D +MFIP E Sbjct: 266 LENYHRMLESGISEVERALAQRQFKADVKKHVDDIASKYI--IPNV-TSDGAVMFIPAEA 322 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 F P+++ A+ + +VSPTTL+ L T + + + I D KL Sbjct: 323 VFAEIHAYHPDVVDYAMAKRVWVVSPTTLMAVLNTARAVLKDVETRKQVHIIKDELGKL 381 >UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDH1_9FIRM Length = 369 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 67/304 (22%), Positives = 129/304 (42%), Gaps = 25/304 (8%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSE---QFENLANRIFEHSNRRVDEQNRQS 137 +++E+ E QQ A + ++Q+L E QF+ + ++E Q Sbjct: 30 GNMKEMLLESEKRQQEA------LFETQQKLQEAIVQFQTTMTNSVKQDLAHLNETTTQH 83 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L ++ + E L + F + + L +L++L+ +I +++ Sbjct: 84 LYTIQKGVNENLSVGYDKTSKVFSQVLERMGKLDESQNSLKELSM-----SITHLQSILT 138 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDA 257 D KT+G +GE+ L +LE + + Y Q + N + + V+ + + ID+ Sbjct: 139 DKKTRGIFGEIELYSLLETAMGTDEKRYAKQYKLSNGS---IADAVLFASEPLRMIAIDS 195 Query: 258 KMTLVAYERYFNAEDDYTRE--SALQEHIAS-VRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 K L Y R ++D ++E LQ S V+ HI+ + K + T ++ +F Sbjct: 196 KFPLENYNRIM--QEDISKEERKRLQNAFVSDVKKHIKAIADK---YIIAHETAEFAYLF 250 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 +P E F L+ + + + LVSPTTL+ + I ++ ++ N QI D Sbjct: 251 LPAEAVFSYIHANCDALVQYSYEQKVYLVSPTTLMAYITAIKAIYLGVQRNENVAQIQDA 310 Query: 375 ASKL 378 +L Sbjct: 311 LKRL 314 >UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6M2_COPPD Length = 434 Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 73/351 (20%), Positives = 151/351 (43%), Gaps = 71/351 (20%) Query: 72 LQSINTSLEADLREV----TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN 127 L + ++EA L+E+ ++++E +Q D+K++ +N+ R+SE F+ ++ R+ Sbjct: 107 LNRMRDTIEAKLKEIQDENSSKLEQMRQTVDEKLQSTLNA--RISESFKLVSERL----- 159 Query: 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 QV G E +L +++ +L+++ + + Sbjct: 160 --------------------------EQVHSGLG----EVQSLVNDVGDLKKVLSNIK-- 187 Query: 188 AINLTRALKGDNKTQGNWGEVVLT-----RVLEASGLREGYEYETQVSIENDARSRMQPD 242 TR + G+++ + ++++ V+ G RE E+ ++ +EN Sbjct: 188 ----TRGILGEDQLEAIIEDILVPGQYEKNVIVRPGSREVVEFAVKIPVENGGNGSY--- 240 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAED--DYTRESALQEHIASVRNHIRLLGRKDYQ 300 + LP IDAK + +ER +AE+ D L++ + + R Y Sbjct: 241 --MWLP------IDAKFPMEDFERLIDAEERCDTAECERLRKELENRLKQCAKDIRDKYI 292 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLVALRTIANL 358 P T D+ +MF+P E F AL R+P I E L+ +++ PTTL L ++ Sbjct: 293 DPPN--TTDFAIMFLPAESLFAEAL-RKPGFI-EVLQRECRVLITGPTTLSAVLNSLRQG 348 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 ++ + A+++ + ++ F D + + + L +AQ+ A +K Sbjct: 349 FKIFAIEKKAEEVWKLLGAVKTEVGKFGDLLEKVNKKLQEAQNVIEDASRK 399 >UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae RepID=Q0BQ35_GRABC Length = 429 Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 23/305 (7%) Query: 129 RVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 R+ E + L + + + EQL +Q+ +SF + + + + ++Q + AQ Sbjct: 115 RLRESSEARLAEIRTAVNEQLHAAVEKQMTESFARVIDQFTAVQKAMSDVQAVTAQ---- 170 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 I + L + KT+G WGE + +L+ L G YET + +D+ ++ VI+ + Sbjct: 171 -IGDIKRLFSNVKTRGGWGEAQVRAMLD-DVLPPG-SYETNKRLRDDSDEVVEFAVIMPM 227 Query: 248 PQGKDVV--IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LP 303 + V IDAK + YER A + E A + +A + I+ RK + LP Sbjct: 228 KGDRPVYLPIDAKFPVEDYERLLAASEAGDVE-AERMAVAGLTRRIKDEARKIATKYVLP 286 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYE 362 RT+++ ++++P + A + R P LI E + + ++++ P+ LRTI Sbjct: 287 P-RTVEFAVLYVPTD-ALYAEIARVPGLIDEVGRLHRVLVLGPSVFPALLRTI----HLG 340 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 H + +Q AD+ L + ++ M + + L K + ++ S R A A Sbjct: 341 HVTLALEQKADQIRTLLGATKTEMERMDKVLERLAKQAGTFSNTIE---SARVRTRAVAR 397 Query: 423 AFRGL 427 RG+ Sbjct: 398 TLRGV 402 >UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4S1_JONDD Length = 465 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 28/289 (9%) Query: 134 NRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQ---ERHTLTHEIRNLQQLNAQMAQEAI 189 N L + + E+L G +++ DSF +Q E H E++NL A + Sbjct: 154 NEAKLEKMRETVDEKLQGTLEKRLGDSFAIVSQRLEEVHKGLGEMQNL-------ASDVG 206 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV--RL 247 L R L + K +G WGEV L+R LE RE +Y + I+ ++ ++ V + R Sbjct: 207 GLKRVLT-NVKNRGGWGEVQLSRQLEDFLTRE--QYAENIIIKEHSQESVEFAVKMPGRD 263 Query: 248 PQGKDVV--IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 P+G +V ID+K YER A++ R + A R + + + + Sbjct: 264 PEGSEVYLPIDSKFPQEDYERLLEAQELGDRAAIDASAKALERAVVEQAKKISDKYISPP 323 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLVALRTIANLWR--- 360 R+ D+ +M++P E F + R+P L + L+N+ +++ PTTL+ L ++ +R Sbjct: 324 RSTDFAIMYLPTEGLFAEVV-RRPGLASR-LQNDHRVLITGPTTLMSLLNSLQLGFRTLA 381 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 E +S QI A + K + D +G+ L Q +A ++ Sbjct: 382 IEKRSSEVWQILGAAKAEFRK---YGDVWEKLGKQLATTQRTVEEAGRR 427 >UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID=C9KWE1_9BACE Length = 410 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 71/294 (24%), Positives = 126/294 (42%), Gaps = 34/294 (11%) Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ--------MAQEAINL 191 +L+ ++LD R V++ K ER + EI Q N Q +AQ+ L Sbjct: 98 TLIKSTEKRLDDMRLMVEEKLQKTLNERIGQSFEIVRSQLENVQKGLGEMKSLAQDVGGL 157 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 + L + K +G +GEV L +LE + +Y+ V + + + ++LP GK Sbjct: 158 KKVL-SNVKMRGTFGEVQLGALLEQ--MMSPEQYDANVKTKKSGTEFV--EFAIKLP-GK 211 Query: 252 D-------VVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS-VRNHIRLLGRKDYQQL- 302 D + IDAK YE+Y++A + ++AL E + N I+ + + + + Sbjct: 212 DDANSTVYLPIDAKFPKDIYEQYYDAFE--AGDTALMESSGKQLENTIKKMAKDIHDKYV 269 Query: 303 -PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 P T D+ +MF+P E + + R + T + I++ PTTL L ++ +R Sbjct: 270 DPPFTT-DFAIMFLPFESIYAEVIRRTSLVETLQKEYKIVVTGPTTLGAILNSLQMGFR- 327 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 I R +++ + + G L+K Q N + A +L G Sbjct: 328 ------TLAIQKRTGEVWTVLGAVKTEFGKFGGLLEKVQKNLQSAGDQLEEVMG 375 >UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SND8_9FIRM Length = 403 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/274 (23%), Positives = 119/274 (43%), Gaps = 28/274 (10%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE-RHTLTHEIRNLQQL 180 IF +++ E + LN L + +LD V+ K ++ + T ++ +++L +L Sbjct: 88 IFNFNDKLKSELKKDFLN-LTVVVEGRLDKINESVEVKLEKSFEDTKKTFSNVMQSLGRL 146 Query: 181 N-AQMAQEAINLTRALK----GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 + AQ E ++ D KT+G +GEV L +VL ++ Y+ Q + N Sbjct: 147 DEAQKKMEFLSNNVQNLNNVLTDKKTRGIFGEVQLYQVLSSAFGNNSEIYQKQYKLSNGT 206 Query: 236 RSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYF------NAEDDYTRESALQEHIASVR 288 + D ++ P+ + ID+K L Y R F E++ E L++HI + Sbjct: 207 MA----DAVIFAPEPVGTICIDSKFPLENYRRIFEDISENKLENEKNFEQNLKKHIDDIS 262 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 + + + T D ++F+P E F P+ + A + + SPTT+ Sbjct: 263 S----------KYIIKNETTDQAILFLPAEAIFAYLNAYMPKTVEYAYSRRVWITSPTTM 312 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 + L TI + + QS+ A +I + L D+ Sbjct: 313 MAILTTIQAVSQNLKQSQYALEIQKELNSLSDEF 346 >UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CUJ7_VARPS Length = 455 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 99/406 (24%), Positives = 177/406 (43%), Gaps = 83/406 (20%) Query: 22 FASYQHA--QQKAE----QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75 FA++Q A QQ AE Q A+ + +L++ ++ + + + + + L + R L + Sbjct: 74 FATFQQALVQQGAEATRTQNAQLDAFSLQLASLQKTLADTLNTQLQG-LSESNARRLSEV 132 Query: 76 NTSLEADLREV----TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD 131 ++EA L ++ T +++ ++ D+K++ + E RL E F+ +A+R+ Sbjct: 133 RATMEAQLAQLQQSNTAKLDEMRKTVDEKLQSTL--EARLGESFKQVADRL--------- 181 Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 QV G E TL + +LQ++ L Sbjct: 182 ----------------------EQVHKGLG----EMQTLAVGVGSLQRV----------L 205 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QG 250 T + KT+G +GEV L +LE E Y + IE RS + D +R P +G Sbjct: 206 T-----NVKTRGVFGEVQLEALLEQVLTPEQYAKQ----IETKPRSGQRVDFAIRFPGRG 256 Query: 251 KD-----VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 D + IDAK YER +A D E A + A +R R + ++Y Sbjct: 257 DDGAPVWLPIDAKFPRDDYERLIDAHERADAPGAELAAKALEARIRVEARSIA-ENYLAA 315 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL--KNNIMLVSPTTLLVALRTIANLWR 360 P T D+ ++F+PVE + L R+P L+ +A+ ++ + L PTTLL L ++ +R Sbjct: 316 P--HTTDFAILFLPVESLYAEVL-RRPGLM-DAIQRQHRVTLAGPTTLLAMLNSLHMGFR 371 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 + A ++ + + + + +S I + + KA D +A Sbjct: 372 TLALEQQASEVWKVLGAVKTEFERYGEWVSRIKEQVAKASDTLDKA 417 >UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostridia RepID=A4XHH9_CALS8 Length = 430 Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 83/341 (24%), Positives = 150/341 (43%), Gaps = 67/341 (19%) Query: 89 RMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 ++EA ++ D K+ Q+ + N R EQ RQ+++S L E Sbjct: 104 KLEAIRKEVDSKLSQI-------------------QEQNERKLEQIRQTVDSHLQQTLEA 144 Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 G +SF K ER L H R L ++ A +A +L R L + K +G GE+ Sbjct: 145 KLG------ESF-KLVSERLELVH--RGLGEMQA-LANGVGDLKRIL-SNVKVRGTLGEI 193 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-------VVIDAKMTL 261 L +++ + + +YE V I+ ++ Q + +++P + ID+K + Sbjct: 194 QLGNIIDQ--ILDTSQYERNVRIK--PHTQEQVEFAIKIPSKNSNENEFIYLPIDSKFPI 249 Query: 262 VAYERYFNAE-----DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +YER +A+ D+ ++ S E+ S++ + + + K Y P RT D+ +MF+P Sbjct: 250 ESYERLLDAQEKNNIDEISKFSKELEN--SIKQNAKTIKEK-YIDPP--RTTDFAIMFLP 304 Query: 317 VEPAFLLALDRQPELITEALKN-NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 E + L R P L + +++ PTT+ L ++A ++ I R Sbjct: 305 TEGLYAEVL-RIPGLFEYVQREYKVIIAGPTTISAILNSLALGFK-------TIAIEKRT 356 Query: 376 SKLYDKMRLFIDDMSAIGQSLDK-------AQDNYRQAMKK 409 S++++ + + S G+ L+K AQD A KK Sbjct: 357 SEVWELLSAVKTEFSKFGEVLEKVKKKLLEAQDTIDTAAKK 397 >UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y818_9BACT Length = 434 Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 140/311 (45%), Gaps = 47/311 (15%) Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF-----GKEAQERHTLTHE 173 A+RI E +R + N +++ L LR L G RR+ Q G E + + T+ Sbjct: 87 ADRI-ERLEKRSGDLN-AAVDKRLESLRTDLLGLRRENQSQLEKIRAGVEERLQETIDKR 144 Query: 174 IRN---LQQLNAQMAQEAINLTRALKG----------DNKTQGNWGEVVLTRVLEASGLR 220 + + L Q + Q+ + R+L G + K +G+WGEV L +LE + Sbjct: 145 LGSSFALVQRQLEAVQKGLGEMRSLAGSVGDLKRVLTNVKVRGSWGEVQLRAILEQ--IL 202 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAE--- 271 +Y V+I D++ R++ VRLP G D + ID+K L Y R +A Sbjct: 203 SPEQYAANVAIRPDSQERVE--YAVRLPGGGDGAPPVWLPIDSKFPLEDYHRLCDASSRG 260 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 D+ + +A + + + + + K Y P + D+ L+F+P+E + L R P Sbjct: 261 DEQSAAAARAALLRVLESEAKDVCEK-YIAPP--HSTDFALIFLPIEGLYAEVL-RDPA- 315 Query: 332 ITEAL--KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 E L K +++ P TL L ++ R ++ QQ R+ ++++ + + Sbjct: 316 AAERLQRKYRVVVAGPATLAALLSSL----RMGFRTLAIQQ---RSGEVWELLASVRGEF 368 Query: 390 SAIGQSLDKAQ 400 G++LDKA+ Sbjct: 369 GKFGEALDKAR 379 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 70/307 (22%), Positives = 135/307 (43%), Gaps = 26/307 (8%) Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 R E + + N++ L+ + S + E+L +++ +SF + + + + +Q Sbjct: 122 RSMEEKVNNMQQNNQKKLDEIRSAVEEKLQSTLEKRLGESFKLVSNQLEMVYKGLGEMQN 181 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 L + LT KT+G WGEV L +L E + +++ N+ R Sbjct: 182 LATGVGDLKKVLTNV-----KTKGTWGEVQLGNILRQILSEEQFVENSKIDPLNNNRV-- 234 Query: 240 QPDVIVRLPQGKD------VVIDAKMTLVAY----ERYFNAEDDYTRESALQEHIASVRN 289 + ++LP D + IDAK+ L+ Y E Y NA+ D E L+ +V+ Sbjct: 235 --EYALKLPNKDDENSNTLLPIDAKLPLIEYHKLIEFYENADKD-NIEKQLKILENAVKK 291 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN-NIMLVSPTTL 348 + + K Y + P + D+ ++F+PVE + + R P LI + ++ +++ SPTTL Sbjct: 292 EAKSINEK-YIKPP--HSTDFAVLFLPVEGLY-AEIIRIPGLIDKLQRDYRVVITSPTTL 347 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + L +I ++ + + ++ + + F+ +S LD+A A Sbjct: 348 IALLNSIQMGFKTLAIEKRSNEVWKLLDTVKHEFSNFVGILSKTKVKLDQASKAIGDAEY 407 Query: 409 KLSSGRG 415 K +G G Sbjct: 408 KAGAGTG 414 >UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bacteroidetes RepID=A6L970_PARD8 Length = 423 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 89/366 (24%), Positives = 160/366 (43%), Gaps = 46/366 (12%) Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE---NLA 119 +LLN RS I + D R E ++ A D ++ S E FE + Sbjct: 33 KLLNEIQRSFDRIEKNFREDFR---LNREESRLVAKDNREELARSMNEFKEAFERGIDSF 89 Query: 120 NRIFEHSNRRVDEQNRQSLNSL---LSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIR 175 NR+ + +DE+ ++ +++ L +R +D ++ + D G Q +T ++ Sbjct: 90 NRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRIG---QSFRLVTEQLE 146 Query: 176 NLQQLNAQM---AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 ++Q+ +M AQ+ L R L + KT+GN GE+ L+ +LE E YE Sbjct: 147 SVQKGLGEMQTLAQDVGGLKRVL-SNVKTRGNIGEIQLSMLLEQLLAPEQYEANVHTRKG 205 Query: 233 NDARSRMQPDVIVRLPQGKD-------VVIDAKMTLVAYERY---FNAEDDYTRESALQE 282 +DA + V+LP G+D + IDAK YE+ ++A D E+A + Sbjct: 206 SDAVV----EFAVKLP-GRDDAREFVYLPIDAKFPKDVYEQLLDAYDAADSQAIETAGKL 260 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--I 340 +++ + + K Y P T D+ +MF+P E + + R + E L+ N + Sbjct: 261 LETTIKKMAKDISDK-YLAPPA--TTDFGIMFLPFEGIYAEVVRRSA--LLEDLQRNYKV 315 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 ++ PTTL L ++ +R I + +++ + + +G L+KAQ Sbjct: 316 VVTGPTTLAAILNSLQMGFR-------TLAIQKHSGEVWTILGAVKKEFEKVGGMLEKAQ 368 Query: 401 DNYRQA 406 N + A Sbjct: 369 KNLQTA 374 >UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=Magnetospirillum RepID=Q2VZP7_MAGSA Length = 456 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 106/437 (24%), Positives = 189/437 (43%), Gaps = 65/437 (14%) Query: 1 MDFSIMVYAV--IALVGVAIGWLFASYQHAQQKAEQLAERE---EMVAELSAAKQQITQS 55 MDF+++ A+ +AL+GVA+ L +K + L+ER E V A + + + Sbjct: 15 MDFALISAALSLLALIGVAVLLL--------RKKDDLSERLDRLERVLRDEARQDRRETA 66 Query: 56 EHWR-------AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS- 107 E R A + + E+R L + T L + T+ A ++ I+Q+ Sbjct: 67 EMIRTFQGDSAASADKNHTELRIL--VETKLAEFRSDQATQARALREEVLGGIKQLGEGI 124 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQE 166 + ++EQ R+ ++ +N Q L + + E+L G +++ +SF K + Sbjct: 125 GKTVAEQ-----TRVVSEHLEKLRGENTQKLEQMRQTVDEKLQGTLEKRLGESF-KLVSD 178 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 R H + L ++ + +A +L R L + KT+G WGEV L +LE + +Y Sbjct: 179 RLEQVH--KGLGEMQS-LASGVGDLKRVLT-NVKTRGTWGEVQLGALLEQ--IFRADQYM 232 Query: 227 TQVSIENDARSRMQPDVIVRLP-QGKD-----VVIDAKMTLVAYER----YFNAEDDYTR 276 + + + + R+ D +RLP +G D + ID+K YER A+ D Sbjct: 233 REANCKKGSLERV--DFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVE 290 Query: 277 ESA--LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 +A L+ + S I R Y P T D+ ++F+P E + L R+P L+ Sbjct: 291 AAAKGLETRVKSFARDI----RDKYVNPP--TTTDFAILFLPTEGLYAEVL-RRPGLVDL 343 Query: 335 ALKN-NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 ++ ++ PTTL L I I R+S++++ + + G Sbjct: 344 IQRDYKVIAAGPTTLGAILNAI-------QMGFKTMAIEKRSSEVWEILGAVKTEFGKYG 396 Query: 394 QSLDKAQDNYRQAMKKL 410 LDK Q ++A K + Sbjct: 397 DVLDKVQKKLQEASKTI 413 >UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=Q2RP03_RHORT Length = 392 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 11/170 (6%) Query: 242 DVIVRLPQGKDVV-IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 D ++ LP + IDAK L +Y A D R A + A V H+R + + Sbjct: 191 DCLLTLPNPPGAIAIDAKYPLESYRALRAAGSDAERLQAGRAFAADVLRHVRDIAER--- 247 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 + T + LMF+P E + P+++ +A + + +VSPTTL+ L T+ + + Sbjct: 248 YIIADETAESALMFLPAEAVYAELHANYPQVVEQAFRRRVWIVSPTTLMATLNTVRAILK 307 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 + D A + ++R IDD++ + + K ++ Q + L Sbjct: 308 DARMN-------DMAVLIRREVRALIDDVNRLDDRVGKLARHFGQTGEDL 350 >UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14LU5_SPICI Length = 387 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 29/264 (10%) Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV--QDS 159 +Q + + +LSEQ L I E V +N N L+ L E L+ F+ + QD+ Sbjct: 53 KQGLGLQNQLSEQKRELLTLISEFQTNSV--KNDAEFNRNLAILNEGLNNFKNNLSKQDT 110 Query: 160 FGKEAQERH------TLTHEIRNLQQL--NAQMAQEAINLTRALKG---DNKTQGNWGEV 208 K + T + NL+ L + +E + L +NK +GN GE Sbjct: 111 DLKNNLNHQGEIISKSFTDVLSNLKVLKESTTTLKEVETKVKTLNDIFLNNKKRGNLGEY 170 Query: 209 VLTRVL-EASGLR-EGYEYETQVSIENDARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYE 265 +L +VL + G R +G+E + ++ + D +V+ K ++ IDAK L Y Sbjct: 171 LLEKVLSDMYGERHQGWERQYKLP------TGTVVDALVKTGGAKENIAIDAKFPLSNYN 224 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 +Y D + L +++ I + + Y L + +MF+P E F Sbjct: 225 KYLEVSDTTIKNKYLNLFKQDLKDRINEVAK--YINLEN--EISSAIMFVPSEDLFAFIY 280 Query: 326 DRQPE-LITEALKNNIMLVSPTTL 348 + P+ +IT A K + + SPTTL Sbjct: 281 GQFPDDIITFAFKKRVWVTSPTTL 304 >UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYA9_STRM9 Length = 359 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 20/201 (9%) Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 +++ E I+L + L D K++G++GE L +VL YE Q N ++ Sbjct: 125 KLSTEVISLQKIL-SDKKSRGSFGETRLEQVLGYVYGDNNNLYERQYKFSN---GKVADA 180 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYF-NAEDDYTRE--SALQEHIASVRNHIRLLGRKDY 299 V+ + V ID+K L Y Y N +Y +E L++HI + + ++G Sbjct: 181 VLFLNTKLNKVAIDSKFPLENYILYSENKNVEYRKEFIKDLKKHIDDISSKYIIIGE--- 237 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 T++ +MF+P E F+ PE++ A + + S T L++ + T+ Sbjct: 238 -------TINQAIMFLPSESIFIDIYSEFPEILEYAYSKRVWIASQTNLMIYITTMQFST 290 Query: 360 RYEHQSRNAQQI---ADRASK 377 ++ NA++I DR SK Sbjct: 291 IEYKRNENAKEILNQLDRFSK 311 >UniRef50_A6LNI7 Uncharacterized protein-like protein n=2 Tax=Thermosipho RepID=A6LNI7_THEM4 Length = 381 Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 81/361 (22%), Positives = 151/361 (41%), Gaps = 54/361 (14%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 I YA I ++ +++G +F Y+ + + + EE+ ++S Q +A+ E Sbjct: 2 ISTYASI-IISLSVG-IFLGYKFGYRIGKNEKQAEEISTQISTINNLTIQIAELKAKYEE 59 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQ--RLSEQFENLANRI 122 + TR+E +Q R+ +N E+ R +E EN Sbjct: 60 IEK--------------------TRLETERQ------REKLNEEKERRFNEFIENTHKLF 93 Query: 123 FEHSNR--RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 E S R ++DEQ + + L+ ++ + ++ + ++ + R EI + Sbjct: 94 SELSERTIKIDEQKDKRIEELVMQMKNFFEEQKKNTEKFLIEQGKSRE----EIEKRRDA 149 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 + + I++ KT+G GEV+L L+ S ++ G +T + EN + Sbjct: 150 QIEDMKRMISIFAKTVSGTKTRGITGEVLLKDALKES-IKVGL-IKTNLKTENG-----E 202 Query: 241 PDVIVRLPQGKDVVIDAKMTLV--AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKD 298 + L GK + ID+K+ V E+Y ED RE +E I V+ I+ + + Sbjct: 203 VEFAWDLGDGKYIPIDSKLPDVFEILEKYNKTEDIIIREKLKKEIINKVKKEIKRVQK-- 260 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 YQ L T D L+ +P +D PEL+ +NN+ + S + V T+ + Sbjct: 261 YQNLAN--TTDSCLLVLPE-----AIIDIAPELVGIGRENNVYICSYKDVFVIAHTLQDK 313 Query: 359 W 359 + Sbjct: 314 Y 314 >UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LRQ6_SYNAS Length = 421 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 45/291 (15%) Query: 134 NRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 N L+ + S + E+L G +++ +SF + ++ + + +Q L A + +L Sbjct: 119 NAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGLGEMQTLAAGVG----DLK 174 Query: 193 RALKGDNKTQGNWGEVVLTRVLE--------ASGL--REGYEYETQVSIENDARSRMQPD 242 + L + KT+G WGEV L +LE A+ L +EG E + +++ R Q D Sbjct: 175 KVLS-NVKTRGVWGEVQLGAMLEQVLHPDQYATNLATKEGGE-RVEFAVKLPGRGEEQ-D 231 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS--VRNHIRLLGR---K 297 V LP IDAK + Y R +A + ES IA+ + N IR R + Sbjct: 232 EAVWLP------IDAKFPMEDYLRLLDAREKVETESM---EIAARHLDNRIRQCARDICE 282 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLVALRTI 355 Y P +T D+ ++F+P E F R +TE L+ +++ PTTL L ++ Sbjct: 283 KYLNPP--QTTDFAILFLPTEGLFAEVARRTG--LTETLQREWRVVIAGPTTLWSILNSL 338 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 +R I R+S++++ + + + G+ L+K Q +A Sbjct: 339 QMGFR-------TLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEA 382 >UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidaminococcus RepID=D2RMS8_ACIFE Length = 327 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 56/183 (30%), Positives = 88/183 (48%), Gaps = 22/183 (12%) Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 +AQ +L + L + K +G WGE+ L +L + +Y T V+I RS+ + + Sbjct: 77 LAQGVGDLKKVLT-NVKNRGIWGEMQLGNLL--GDMLAPEQYGTNVAIR--PRSQERVEF 131 Query: 244 IVRLP--QGKDVV---IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG--- 295 +RLP G V IDAK L Y+R A +D + E +A + IRL Sbjct: 132 AIRLPGRTGDAPVWLPIDAKFPLEDYQRLVQAREDGDADG---ETLALKQLEIRLKSEAK 188 Query: 296 --RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA-LKNNIMLVSPTTLLVAL 352 R Y P + D+ L+++P+E F A+ R P L++E K + LV PTTL + Sbjct: 189 DIRDKYIAPP--YSTDFGLLYLPLEGLFAEAVSR-PGLVSELQRKYRVTLVGPTTLAAVV 245 Query: 353 RTI 355 ++ Sbjct: 246 NSL 248 >UniRef50_C4XER8 Putative uncharacterized protein n=1 Tax=Mycoplasma fermentans PG18 RepID=C4XER8_MYCFE Length = 435 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 75/335 (22%), Positives = 138/335 (41%), Gaps = 67/335 (20%) Query: 123 FEHSNRRVDEQNRQSLNSL---LSPLREQLDGFRRQVQDSFGKEAQE-----RHTLTHEI 174 F N+ VDE+ S N + S LRE++D + D KE Q +E+ Sbjct: 56 FVKFNKNVDEKIANSFNMINKNFSDLREEIDKKMKSFDDLVIKEVQIIKGAIDEKFENEV 115 Query: 175 ------------RNLQQLNAQMA-----QEAIN-LTRALKGDNKTQGNWGEVVLTRVLE- 215 N++ L+ + Q+++N L + G K++GN+GE L +L Sbjct: 116 AKKMEENFKNIKENMENLDKNLVRFETLQDSVNSLQKTFDG-TKSRGNYGEFNLKSILNE 174 Query: 216 -------------ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-------VVI 255 ++G + V E+ + + D ++++P G+ + I Sbjct: 175 HLSKDLWAAQVDLKKIAKKGLDEAAAVDFEDMNPNSERVDFVIKMPNGEANSQNDRYLPI 234 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D K L ++ Y +A+ ++E ++ I + + + + T +M++ Sbjct: 235 DCKFPLDSFNAYQDAD---SKEERIKAQINFRKVILEQAKSIKSKYIIKNVTTKQAIMYL 291 Query: 316 PVEPAFLLALDRQPELITEALKN-NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 P E F LA+ EL++ K+ +IML P+T+L+ ++TIA Y + N +Q D Sbjct: 292 PSEAIFALAV-SDNELVSALNKDHDIMLAGPSTILMIIQTIA----YANYGINIKQNID- 345 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 + +D I QS D Q++KK Sbjct: 346 ---------ILLDAFLFIRQSEDNIYTKIEQSIKK 371 >UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K3_RALEH Length = 495 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 58/236 (24%), Positives = 108/236 (45%), Gaps = 23/236 (9%) Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 +AQ +L + L + K++G WGEV L +LE E Y + + AR + Sbjct: 225 LAQGVGDLKKVLT-NVKSRGTWGEVQLEMLLEQMLTPEQYGKNVETVRNSGARV----EF 279 Query: 244 IVRLP---QGKD-----VVIDAKMTLVAYERYFNAEDDYTRESAL---QEHIASVRNHIR 292 +RLP G D + +DAK YER +A++ + L +E ++R + Sbjct: 280 AIRLPGKAAGGDNAPVWLPVDAKFPKEQYERLVDAQERGDPDGVLAFGRELEVALRREAQ 339 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLV 350 + K Y P +T D+ ++F+P E + L R+P L T+ ++ + + + PTTL Sbjct: 340 TIAEK-YLSPP--QTTDFAILFLPTEGLYAEVL-RRPGL-TDLMQRDYRVTVAGPTTLTA 394 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 L ++ +R + + ++ + + + F D ++ +L++A N QA Sbjct: 395 LLNSLQMGFRTLALEKRSSEVWEVLGAVKTEFGKFGDVLAKTRDTLERAARNIEQA 450 >UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=Bacteria RepID=A4JCN2_BURVG Length = 491 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 45/263 (17%) Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 EQRL E N A ++ E R VDE+ +L L + + QV G E Sbjct: 169 EQRLKEIETNNAAKL-EEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLG----EM 223 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 TL + +L+++ LT + KT+G WGEV L +LE + +Y Sbjct: 224 QTLAAGVGDLKKV----------LT-----NVKTRGTWGEVQLEALLEQ--MLTPDQYAK 266 Query: 228 QVSIENDARSRMQPDVIVRLPQGKD----------VVIDAKMTLVAYERYFNAE---DDY 274 V+ + R+ + +RLP G+D + IDAK YER +A+ D Sbjct: 267 NVATVPKSSERV--EFAIRLP-GRDAGTRDAAPVWLPIDAKFPREDYERLIDAQERADAA 323 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 E A + A VR R + K Y P T D+ L+F+P E + L R+P L T+ Sbjct: 324 AVEEAGRALEARVRMEARTIAEK-YVAPP--HTTDFALLFLPTEGLYAEIL-RRPGL-TD 378 Query: 335 ALKNN--IMLVSPTTLLVALRTI 355 L+ + + + PTTL L ++ Sbjct: 379 LLQRDYRVTVAGPTTLTALLNSL 401 >UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y0_9CLOT Length = 439 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 38/267 (14%) Query: 154 RQVQDSFGKEAQERHTLTHE-IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 R++ +SF K ER H+ + +Q L A + +L + L + KT+G GEV L R Sbjct: 155 RRLSESF-KVVSERLEQVHKGLGEMQSLAAGVG----DLKKVL-SNTKTRGVLGEVQLER 208 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-------VVIDAKMTLVAYE 265 +LE E YE ++ SR + ++LP GKD + +DAK L Y Sbjct: 209 ILEQFLSPEQYEK----NVITKKGSRETVEFAIKLP-GKDYDNKTVYLPLDAKFPLEVYN 263 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLG------RKDYQQLPGLRTLDYVLMFIPVEP 319 + +A Y ++ Q AS +N R + R Y P T D+ LMF+P E Sbjct: 264 KLLDA---YDLQNQAQIDAAS-KNLERFIKKSAKDIRDKYIDPPN--TTDFGLMFLPTEG 317 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 + L Q + + NI + PTTL+ L ++ +R + I +S+++ Sbjct: 318 IYAEVLKNQSLVEFVQREYNINITGPTTLVALLNSLQMGFR-------SLAIEKHSSEVW 370 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQA 406 + + S L+ AQ+ QA Sbjct: 371 KILGAVKTEFSKFETVLNSAQNKLNQA 397 >UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8IQM2_AZOC5 Length = 388 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 63/278 (22%), Positives = 122/278 (43%), Gaps = 40/278 (14%) Query: 147 EQLDGFRRQVQDSFGKEAQERH----TLTHEI-------RNLQQLNAQMAQEAINLTRAL 195 E+LD ++ +SF A+ H TL + ++L L++Q+ ++L L Sbjct: 96 ERLDSTSYRLGESFNTAARATHESLTTLAERLAMVERAEKSLSDLSSQV----MSLRETL 151 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QGKDVV 254 + + +G +G+ + ++ R+ + + Q ++ N R PD ++ LP + +V Sbjct: 152 -ANKQARGAFGQARMEAIVSDGLPRDSFAF--QYTLSNGRR----PDCVIFLPGDPRPLV 204 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 +DAK L A + A+ R++A + H+ + + LPG T D ++F Sbjct: 205 VDAKFPLEAVTAFREAQSAEARKAAGNRLAQDMMKHVNDVAERYL--LPG-ETQDVAIIF 261 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT---IANLWRYEHQS------ 365 +P E + +I A + ++LVSP+ L++A++ IA R Q+ Sbjct: 262 VPSESVHAELHEHFDAVIQRAYRARVILVSPSLLMLAIQVVQAIAKDARMREQADAIRRE 321 Query: 366 -----RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 + ++ +R L L DD+S + S DK Sbjct: 322 VGLLVEDVARLRERVGDLSKHFALVGDDVSRVLVSADK 359 >UniRef50_Q4A6N0 Putative uncharacterized protein n=2 Tax=Mycoplasma RepID=Q4A6N0_MYCS5 Length = 499 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 67/303 (22%), Positives = 130/303 (42%), Gaps = 34/303 (11%) Query: 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER--------HTLTHEIRNLQQ 179 R + E Q + + L+E+ + + + ++D K+ E + ++ ++ L Sbjct: 157 RFLSENVNQKVTNSYKELKEEFNNYSKTLKDEMSKKINEEISKFGEKVNLISSDVNQLVS 216 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 L +++ R + DNKT+G +GE +L L + GY+ + Q+S N + ++ Sbjct: 217 LRNDLSE-----IRKIFEDNKTRGIFGEKLLENYLN-DAMPNGYKSQFQLS--NKKQDKV 268 Query: 240 QPDVIVRLPQGKDVV--IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN---HIR-- 292 + + + + ID+K L +Y + D E E ++ N +I+ Sbjct: 269 DIAIPINVSDNNQIYIPIDSKFNLESYRSLLDYIDANKNELDFPEQQKAINNLWKNIKAE 328 Query: 293 -LLGRKDYQQ---LPGLRTLDYVLMFIPVEPAFL-LALDRQPELITEALKN-NIMLVSPT 346 + K + + G+ T + MFIP E +L L + L+ E K NI L+SP+ Sbjct: 329 IMANAKSISEKYIIEGITT-NVAFMFIPSESIYLELVKYEKGSLVDEIRKKYNIELISPS 387 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 ++V + I +L+ + + + I K D I +A L K Q +Y Q Sbjct: 388 LVMVLVSIIKDLYSKFNIGIHNKDIVHLIKKFDDNADKVIKSTAA----LLKKQSSYLQE 443 Query: 407 MKK 409 ++K Sbjct: 444 LEK 446 >UniRef50_A5IY37 DNA recombination protein n=1 Tax=Mycoplasma agalactiae PG2 RepID=A5IY37_MYCAP Length = 477 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 69/345 (20%), Positives = 144/345 (41%), Gaps = 43/345 (12%) Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQVQDSFGKEAQERHTLTHE 173 FE N+ + + ++E N +S N + + + D + +++ FG + + E Sbjct: 133 FEKKFNQTVSSNLKEINENNAKSFNDIKEKIDKHFEDTLTKHIKEQFGNIQVQMDKVGKE 192 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE-YETQVSIE 232 + +Q+ A + +L R +NK G +GE L ++LE E + Q I Sbjct: 193 MIKFEQMQASVD----DLNRTF-SNNKKTGEFGEFTLEQILEEHYPNEKNRLWFKQYQI- 246 Query: 233 NDARSRMQPDVIVRLPQGKD-------VVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 N +++ D +++ + + ID K ++RY +++ +E+ L+E Sbjct: 247 NPGKNQEAVDFAMKIKSRSENEEVEQIIPIDCKFPKEKWDRYLDSKSASEKEAHLKELKK 306 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL-KNNIMLVS 344 +++ + + K + P +T + LM++P + L L + +TE K + + Sbjct: 307 AIKEMAQSINEKYIK--PDRKTTPFALMYVPSASVY-LTLIQDMNFVTEIQDKLKVYIQG 363 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 P ++V ++ Y Q+ N+ Q+ KL D +F+D Q NY Sbjct: 364 PQIIMVF------IYSYLLQN-NSFQVEKNIEKLKD---IFLD-----------VQKNYN 402 Query: 405 QAMKKLSSGRGNVLAQAEAFRGL---GVEIKREINPDLAEQAVSQ 446 K++ G N+ + F + +I ++IN +S+ Sbjct: 403 TLYKRVIDGLDNLDKSRDKFVSVVNTANKITKKINTTAKSLGISK 447 >UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 Tax=Gluconobacter oxydans RepID=Q5FTW7_GLUOX Length = 410 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 27/234 (11%) Query: 133 QNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 QN Q + + + + EQL G +Q+Q SF + ++ + + + + AQ+ +L Sbjct: 111 QNEQ-IERIRATVNEQLHGAVEKQMQTSFQRVVEQFSAMQKALGEVTSVTAQIG----DL 165 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QG 250 R L + KT+G WGE +L+ L EG Y+T + + + V++P +G Sbjct: 166 KR-LFSNVKTRGGWGEAQCRAILDDI-LPEG-SYDTNFRLGTAGEN---VEFAVKMPVRG 219 Query: 251 KD----VVIDAKMTLVAYERYFNAEDDYTRESALQEHIA--SVRNHIRLLGRKDYQQ--L 302 + + ID+K AYER NA + AL E A + N IR +K + L Sbjct: 220 TETPPRLAIDSKFPTEAYERLLNASEA---GDALAERQARRELENVIRSEAKKIASKYIL 276 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK-NNIMLVSPTTLLVALRTI 355 P + T+++ ++++P + + R P +I E + +M++ P+ L LRT+ Sbjct: 277 PPV-TVEFAVLYLPTD-GLYAEIARMPGVIDEIGRLYRVMVMGPSLLPAMLRTV 328 >UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU20_9FLAO Length = 499 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 80/341 (23%), Positives = 160/341 (46%), Gaps = 29/341 (8%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 +SL+S + +++ + + +Q+ D +Q I+ + +E +N+ I E + + Sbjct: 129 KSLKSFEENFSENIKNLNDLL---RQNFGDFNKQQIDLNGQATENIKNVEKTI-EKNLKS 184 Query: 130 VDEQNRQSLNSLLSPLREQL-DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + E N LN + + E+L +++ +SF K+ +R H + L ++ +A Sbjct: 185 IREDNTIQLNEMRKTVDEKLQTTLEKRLGESF-KQVSDRLEQVH--KGLGEM-QNIAIGV 240 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L + L + KT+G GE L +LE + +Y V+ + +++ ++ ++LP Sbjct: 241 GDLKKVL-SNVKTRGVLGEYQLENILEQ--ILTPDQYAKNVATKKGSQANVE--FALKLP 295 Query: 249 ---QGKDV--VIDAKMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQ 300 +GK+V ID+K + Y+R +A D +E SA + + + + + + K Y Sbjct: 296 GKEEGKEVWMPIDSKFPIEDYDRLLDAFDKGEKEGIESAQKVLLKKIESFAKSISEK-YI 354 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL--KNNIMLVSPTTLLVALRTIANL 358 P T D+ +MF+PVE + L R P L E L K I + PTTL L ++ Sbjct: 355 DPP--HTTDFGIMFLPVESLYAEVL-RHPGLF-EILQRKYKITVTGPTTLSALLNSLQMG 410 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 +R + + ++ D + + + F +S + + L+ A Sbjct: 411 FRTLAVQKRSSEVWDILKAVKFEFKEFSGVLSKVHKQLNTA 451 >UniRef50_A3VQI8 RmuC domain protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VQI8_9PROT Length = 748 Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust. Identities = 65/265 (24%), Positives = 107/265 (40%), Gaps = 51/265 (19%) Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 D+I + RL E+L +R+ D+++ + LL L LDG R D Sbjct: 368 DRIDDRLQDLPRLKTALEDLVDRV-------SDDKDEEEAAGLLRALDRTLDGLR----D 416 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 SF L ++ LQ+ +A+ A +R + + + + V Sbjct: 417 SF-------RDLADQVAALQETSARQAHAQ---SRPMASASLSDVVRMALPDHEVAFGVT 466 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAE--DDYTR 276 LR GY + + + D LV+ + F E DD Sbjct: 467 LRTGYVVDCAIEL------------------------DGHRGLVSIDTGFPTEVFDDLAS 502 Query: 277 E-SALQEHIASVRNHIRLLGRKDYQQL--PGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 + +A+Q + ++R IR L R ++ PG T++ L++IP E AF L +R PEL+ Sbjct: 503 DLAAIQLNEQAIRYEIRELIRDAEERAISPG-ETIEGCLLYIPSEHAFTLLNERFPELVR 561 Query: 334 EALKNNIMLVSPTTLLVALRTIANL 358 EA + ++ SP +L L I L Sbjct: 562 EARRRHVWFASPASLTTLLGLIDAL 586 >UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT Length = 366 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 10/166 (6%) Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 +L+ LK K +G GE L +LE ++ Y+ TQ ++ + D ++ + Sbjct: 116 DLSNILKSP-KLRGGLGEQFLYEILENFLPKDLYK--TQYKFKDGSIC----DAVIFTDR 168 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 G + ID+K + ++ AE R+ + I+ V+ I + K LP +T D Sbjct: 169 G-IIPIDSKFPMENFKAMITAETQPERDKYKKMFISDVKKRIEEISSKYI--LPEEKTTD 225 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 +M++P E + + PE+ A NI++ SP TL L+ + Sbjct: 226 QAIMYVPSENVYYELIVNTPEIEDFAKNKNIVMASPNTLSYFLKVL 271 >UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamonadaceae RepID=A1WJL3_VEREI Length = 621 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 72/346 (20%), Positives = 148/346 (42%), Gaps = 32/346 (9%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 ++ LEA+ ++T + Q ++ ++ +EQ N N + Sbjct: 257 ALKNQLEANGLQITNQFSVLQDAVSQQLAGLVQGSGHNAEQLRNTLNERLAA----IQAD 312 Query: 134 NRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 N L ++ + E+L +++ +SF K ER H + L ++ +A +L Sbjct: 313 NASKLEAMRRTVDEKLHATLEQRLGESF-KLVSERLEQVH--KGLGEMQT-LAGSVGDLK 368 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 R + + K++G WGE+ L ++E E + + +D + +RLP D Sbjct: 369 RVMT-NVKSRGTWGEMQLGAIIENVLTPEQFARNVKTVPGSDELV----EFAIRLPGKSD 423 Query: 253 -----VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ-LPGLR 306 + IDAK + Y+R +A+D + + A +RL RK + + + Sbjct: 424 EHPVWLPIDAKYPVEQYQRLLDAQDAADKAAIASAGNA-FETSVRLEARKIFAKYVSPPH 482 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNN--IMLVSPTTLLVALRTIANLWRYEHQ 364 T D+ ++++P E F + R+P L+ EA++N +M+ P L L ++ +R Sbjct: 483 TTDFAVLYLPTESLFAEVM-RRPGLV-EAVQNECRVMITGPANLAAMLNSLQMGFR---- 536 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 I R+S+++ + + + G++++ + + A KK Sbjct: 537 ---TLAIEKRSSEVWSLLGSVKTEFAKFGEAVEATKKSIDTAAKKF 579 >UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B826_THEAS Length = 445 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 38/309 (12%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 + R+ N + L+ + + E+L G R++ ++F ER H+ L ++ Sbjct: 140 VLAEGMERIRRGNEEKLDRMRDVVEEKLQGALERRLGEAF-SSVSERLEKVHQ--GLGEM 196 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 A +A + +L R L + K++G WGE+ L +LE + Y QV + R Sbjct: 197 RA-LASDVGDLKRVLS-NVKSRGIWGEIQLGNMLEQVMSPDQYGVNVQVVPGSSNRV--- 251 Query: 241 PDVIVRLPQGKDVV---IDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLL 294 + V+LP + V +D+K Y R +A+ D E A +E + R + Sbjct: 252 -EFAVKLPGDESPVWLPLDSKFPQEDYHRLLSAQEASDPKGAEEARRELANRIVAEARSI 310 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAF---LLALDRQPELITE--ALKNNIMLVSP--TT 347 R Y P T D+ +M++PVE + L A L+TE + + M+++ + Sbjct: 311 -RDKYVCPP--HTTDFAVMYLPVEGLYAEVLKAPGLAERLMTEFRVVPSGPMVLAALLNS 367 Query: 348 LLVALRTIA------NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 L + RT+A +W+ Q + + R ++ +K R I D G LD+A Sbjct: 368 LQMGFRTLAIQRRSGEVWKLLGQVKGDLR---RFGEMLEKARRKIQD---AGDELDRAAS 421 Query: 402 NYRQAMKKL 410 R ++L Sbjct: 422 RSRTMERRL 430 >UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9V7_9ACTN Length = 451 Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust. Identities = 70/317 (22%), Positives = 133/317 (41%), Gaps = 66/317 (20%) Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 +H DK+R+ ++++ + N+ + VDE+ ++LN LS Sbjct: 119 EHRLDKVRETVDAQLGAIRKDNNVQ---LDQMRATVDEKLSRTLNDRLSA---------- 165 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 SF + + + + + ++Q + + +L R L G+ K +G GEV L +L Sbjct: 166 ----SFKQVSDQLEAVYKGLGDMQSIATGVG----DLKRVL-GNVKARGILGEVQLGAIL 216 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV--IDAKMTLVAYERYFNAED 272 + + +Y V+ + A R++ V + + +G V+ ID+K AYE +A+ Sbjct: 217 --ADILTPDQYLENVATKPGASERVEFAVKLPVDEGDPVLLPIDSKFPGDAYEHLLDAQ- 273 Query: 273 DYTRESALQEHIASVRNHIRLLGRKD-------YQQLPGLRTLDYVLMFIPVEPAFLLAL 325 ES E +A+ R + + +++ Y +P T ++ +MF+P E + + Sbjct: 274 ----ESGDAETVAAARKTLDTMVKREANDICEKYLSVPA--TTNFGIMFVPFEGLYAEVV 327 Query: 326 DRQPELI-TEALKNNIMLVSPTTLLVALRTI------------------------ANLWR 360 R P LI T ++ + P+T+ L ++ A L R Sbjct: 328 SR-PGLIETLGRDYHVNVAGPSTMAAILNSLQMSYQTFKLQKRTDDVLRVLSAVKAELPR 386 Query: 361 YEHQSRNAQQIADRASK 377 Y+ R AQQ + A K Sbjct: 387 YQKALRRAQQQIETAGK 403 >UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=cellular organisms RepID=RMUC_XYLFT Length = 456 Score = 42.0 bits (97), Expect = 0.055, Method: Compositional matrix adjust. Identities = 88/378 (23%), Positives = 158/378 (41%), Gaps = 32/378 (8%) Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE 108 +Q++ + R+ +L+ + L + SL D R+ QQ D + Q + Sbjct: 57 QQEVRLASFARSLTDLVARIDQRLDQLTASLGEDARKGRQEASEGQQRFADALGQRLTEL 116 Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 + + Q N E + N Q L + + + E+L DS K ER Sbjct: 117 TQRNAQSINEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTTLNTRLDSSFKLVSER- 175 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 L R L ++ Q+A +L R L K++G WGEV L +L+ + +E +Y Sbjct: 176 -LEQVQRGLGEMQ-QLATGVGDLKRVLT-HVKSRGTWGEVQLDNILDQTLTQE--QYARG 230 Query: 229 VSIENDARSRMQPDVIVRLPQGKD-------VVIDAKMTLVAYERYFNAEDDYTRESALQ 281 V + DA + D VRLP G+ + ID K YER +A++ +E ++ Sbjct: 231 VRVCPDASEIV--DFAVRLP-GRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQE-LVR 286 Query: 282 EHIASVRNHIRLLGR--KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 + I++ + +D +P T D+ +MF+P E + + R+P L + L+ Sbjct: 287 TMGVQLERAIKIQAKSIRDKYIVPP-HTTDFAVMFLPTEGLYAETI-RRPGL-ADVLQRE 343 Query: 340 --IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 +++ PTT+ L ++ +R I R+S+++ + + L+ Sbjct: 344 YRVVVAGPTTVTALLNSLQMGFR-------TLAIEQRSSEVWSLLGAVKSEFGKFAGILE 396 Query: 398 KAQDNYRQAMKKLS-SGR 414 KA+ K L +GR Sbjct: 397 KAEKQINTVGKSLGEAGR 414 >UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY08_ACICJ Length = 451 Score = 42.0 bits (97), Expect = 0.057, Method: Compositional matrix adjust. Identities = 73/326 (22%), Positives = 142/326 (43%), Gaps = 31/326 (9%) Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQ 155 AD R + L E E L R+ E + N L+++ + + E+L ++ Sbjct: 113 ADRMNRDLAGVSLALREGQEALRGRV-EQKLDEIRTGNEAKLDAMRAAVDEKLQSALEQK 171 Query: 156 VQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLE 215 + +SF + A++ + I +Q + Q+ +L R L + K++G WGE + + L+ Sbjct: 172 IGESFQRVAEQFAQVQQAIGQVQSVATQVG----DLKR-LFANVKSRGGWGEAQIRQTLD 226 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLP--QGKDVV---IDAKMTLVAYERYFNA 270 + +E + D + +R+P +G V IDAK Y+R A Sbjct: 227 DTLPPGTFE----ANFRADPNGAEAVEFALRMPVREGDQPVWLPIDAKFPTEDYDRLLLA 282 Query: 271 EDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 + R+ AL+ +R+ + + +K Y + P RT D ++++P E F + R Sbjct: 283 AEAGDRDGETQALRALSTRIRDEAKKIAQK-YIRPP--RTTDIAILYLPSEGLF-AEVAR 338 Query: 328 QPELITEALKNNIMLV-SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P L+ + + + +L+ SP+ L L TI R H + ++ A ++ ++L Sbjct: 339 IPGLVEQVQREHRVLIQSPSLLPALLHTI----RVGHFTVQLERRAGEIGRILSAVKL-- 392 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSS 412 + +G+S++ Q K + S Sbjct: 393 -EWGKLGESIEALAKRAEQLSKGIDS 417 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammapro... 581 e-164 UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteria... 430 e-119 UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfo... 420 e-116 UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatu... 414 e-114 UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax... 414 e-114 UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepI... 409 e-112 UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter ho... 409 e-112 UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuni... 409 e-112 UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD 409 e-112 UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinob... 408 e-112 UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reineke... 403 e-111 UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromoh... 400 e-110 UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Altero... 400 e-110 UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter ca... 400 e-110 UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=... 400 e-110 UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfu... 397 e-109 UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassif... 397 e-109 UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynuc... 396 e-108 UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bac... 394 e-108 UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine ... 392 e-107 UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermane... 392 e-107 UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellula... 392 e-107 UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma pro... 390 e-107 UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisp... 390 e-107 UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiell... 389 e-107 UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfuri... 387 e-106 UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Maripro... 387 e-106 UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobact... 385 e-105 UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio ja... 383 e-105 UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaprote... 382 e-104 UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobact... 382 e-104 UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B... 381 e-104 UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsu... 381 e-104 UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4... 381 e-104 UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinom... 378 e-103 UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurel... 378 e-103 UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricau... 378 e-103 UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=... 378 e-103 UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacte... 377 e-103 UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepI... 377 e-103 UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria ... 377 e-103 UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 ... 377 e-103 UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=... 376 e-103 UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma p... 375 e-102 UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacte... 375 e-102 UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp.... 373 e-102 UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistip... 372 e-101 UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroi... 371 e-101 UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira cruno... 370 e-101 UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingoba... 370 e-101 UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepI... 368 e-100 UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candida... 368 e-100 UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candida... 367 e-100 UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=... 366 1e-99 UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinel... 365 2e-99 UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 T... 363 7e-99 UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus... 358 2e-97 UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromo... 358 3e-97 UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alterom... 358 3e-97 UniRef50_B9L835 DNA recombination protein RmuC family protein n=... 357 4e-97 UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychro... 357 5e-97 UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaprot... 357 5e-97 UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovib... 356 9e-97 UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasm... 356 1e-96 UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methano... 354 4e-96 UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=... 353 1e-95 UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodoba... 352 2e-95 UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammapr... 351 3e-95 UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoc... 347 5e-94 UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine ... 346 1e-93 UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylo... 344 4e-93 UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacter... 344 4e-93 UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudom... 344 5e-93 UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfo... 342 1e-92 UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingiv... 342 2e-92 UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorob... 341 2e-92 UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candida... 341 4e-92 UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G... 341 4e-92 UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicol... 338 4e-91 UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=u... 338 4e-91 UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campyloba... 336 2e-90 UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 T... 333 8e-90 UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victiva... 333 1e-89 UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitino... 332 1e-89 UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum cente... 331 3e-89 UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinom... 331 5e-89 UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibac... 331 5e-89 UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothi... 330 5e-89 UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family ... 330 9e-89 UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotr... 327 7e-88 UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinom... 326 8e-88 UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID... 326 1e-87 UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Ta... 325 2e-87 UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Z... 321 4e-86 UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=... 321 4e-86 UniRef50_Q0S487 Possible DNA recombination protein, RmuC family ... 320 7e-86 UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium... 320 8e-86 UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithio... 320 1e-85 UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadal... 319 1e-85 UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkerma... 319 1e-85 UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschi... 318 2e-85 UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammapr... 318 4e-85 UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingo... 317 5e-85 UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sangui... 317 7e-85 UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicob... 316 1e-84 UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCV... 315 2e-84 UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxi... 315 3e-84 UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalk... 315 3e-84 UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenb... 315 4e-84 UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis a... 314 4e-84 UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutu... 313 1e-83 UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis... 312 2e-83 UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalk... 311 4e-83 UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmoto... 310 8e-83 UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Ta... 310 9e-83 UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 ... 308 2e-82 UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicob... 308 4e-82 UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=unculture... 308 5e-82 UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinis... 307 5e-82 UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W... 307 8e-82 UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamur... 306 1e-81 UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geoderm... 304 5e-81 UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanim... 303 7e-81 UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaerom... 303 9e-81 UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actino... 302 2e-80 UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=... 301 4e-80 UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotell... 299 1e-79 UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninog... 299 2e-79 UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibroba... 298 4e-79 UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8... 298 5e-79 UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordoni... 296 2e-78 UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus ... 296 2e-78 UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfo... 294 3e-78 UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=... 294 5e-78 UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas R... 294 6e-78 UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16... 291 4e-77 UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardi... 291 4e-77 UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbel... 290 9e-77 UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacteriu... 288 4e-76 UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=P... 287 7e-76 UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukam... 286 1e-75 UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Co... 284 3e-75 UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=... 282 2e-74 UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae Rep... 282 2e-74 UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimi... 277 5e-73 UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=... 276 9e-73 UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=... 276 1e-72 UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula b... 276 2e-72 UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacteri... 273 9e-72 UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacter... 273 1e-71 UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID... 270 8e-71 UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanoba... 268 3e-70 UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmati... 268 4e-70 UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinob... 266 1e-69 UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus ... 266 2e-69 UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campyloba... 265 2e-69 UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Microc... 264 3e-69 UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenit... 259 2e-67 UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinom... 257 9e-67 UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C... 255 3e-66 UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, ... 251 3e-65 UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=F... 251 4e-65 UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimi... 249 2e-64 UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Microc... 248 3e-64 UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. ora... 245 3e-63 UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocan... 243 1e-62 UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria... 240 1e-61 UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmati... 238 3e-61 UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 ... 229 2e-58 UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 ... 221 4e-56 UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B... 217 7e-55 UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales Rep... 213 9e-54 UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q... 211 7e-53 UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured ... 209 2e-52 UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured ... 208 3e-52 UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaprot... 207 9e-52 UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodoba... 202 2e-50 UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=M... 201 4e-50 UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae Re... 200 9e-50 UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betapro... 200 1e-49 UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitr... 198 4e-49 UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opituta... 197 6e-49 UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteri... 197 1e-48 UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bactero... 196 1e-48 UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammapr... 196 1e-48 UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6B... 195 3e-48 UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacte... 192 2e-47 UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=... 192 3e-47 UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythro... 191 5e-47 UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimo... 189 2e-46 UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter pr... 189 3e-46 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 188 4e-46 UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepI... 187 6e-46 UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicu... 187 7e-46 UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovo... 187 8e-46 UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH ... 186 1e-45 UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia... 186 2e-45 UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID... 186 2e-45 UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LR... 186 2e-45 UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax... 185 2e-45 UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidl... 185 3e-45 UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi... 185 3e-45 UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE0... 184 8e-45 UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B... 182 2e-44 UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvima... 182 3e-44 UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K... 182 3e-44 UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus la... 181 6e-44 UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Strepto... 179 2e-43 UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=B... 179 2e-43 UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter pisco... 177 6e-43 UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphapr... 176 2e-42 UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostri... 176 2e-42 UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=... 174 6e-42 UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacte... 173 1e-41 UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracil... 170 7e-41 UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostri... 169 2e-40 UniRef50_B3CQE7 DNA recombination protein RmuC homolog n=2 Tax=O... 169 2e-40 UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteur... 165 2e-39 UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8... 165 5e-39 UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1... 162 2e-38 UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae Rep... 161 6e-38 UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidami... 158 3e-37 UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma my... 157 1e-36 UniRef50_Q2NJ26 RmuC family protein n=5 Tax=Candidatus Phytoplas... 154 7e-36 Sequences not found previously or not previously below threshold: UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=... 183 2e-44 UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychro... 179 3e-43 UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Therman... 178 4e-43 UniRef50_B4S924 Putative uncharacterized protein n=2 Tax=Chlorob... 177 7e-43 UniRef50_B0MP59 Putative uncharacterized protein n=1 Tax=Eubacte... 177 9e-43 UniRef50_A6GP11 Putative uncharacterized protein n=1 Tax=Limnoba... 176 1e-42 UniRef50_C8W9S7 Putative uncharacterized protein n=1 Tax=Atopobi... 175 2e-42 UniRef50_B0P9L0 Putative uncharacterized protein n=1 Tax=Anaerot... 172 3e-41 UniRef50_A6SXN7 Uncharacterized conserved protein n=8 Tax=Bacter... 171 5e-41 UniRef50_B0VIW8 DNA recombination protein rmuC homolog n=1 Tax=C... 170 1e-40 UniRef50_A3HRV1 Putative DNA recombination-related protein n=1 T... 167 1e-39 UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamon... 165 2e-39 UniRef50_B2IM63 Competence-induced protein Ccs50 n=69 Tax=Strept... 165 2e-39 UniRef50_D1PNL6 RmuC domain protein n=2 Tax=Ruminococcaceae RepI... 165 4e-39 UniRef50_A8SFR6 Putative uncharacterized protein n=1 Tax=Faecali... 164 8e-39 UniRef50_C7H3S0 RmuC domain protein n=2 Tax=Firmicutes RepID=C7H... 163 1e-38 UniRef50_B6YRP9 DNA recombination protein rmuC homolog n=1 Tax=C... 162 2e-38 UniRef50_B2T5V8 Putative uncharacterized protein n=7 Tax=Burkhol... 162 3e-38 UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncul... 156 2e-36 UniRef50_B9CM15 RmuC domain protein n=1 Tax=Atopobium rimae ATCC... 155 4e-36 UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 ... 154 6e-36 UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiph... 154 7e-36 UniRef50_B6GAF4 Putative uncharacterized protein n=1 Tax=Collins... 154 9e-36 UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collins... 151 7e-35 UniRef50_C9MZ28 RmuC family protein n=5 Tax=Fusobacteriaceae Rep... 146 2e-33 UniRef50_B3PMT9 RmuC domain protein n=1 Tax=Mycoplasma arthritid... 144 6e-33 >UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammaproteobacteria RepID=RMUC_ECO57 Length = 475 Score = 581 bits (1498), Expect = e-164, Method: Composition-based stats. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA Sbjct: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN Sbjct: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL Sbjct: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ Sbjct: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ Sbjct: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR Sbjct: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ Sbjct: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR Sbjct: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 >UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteriaceae RepID=D2TWP3_9ENTR Length = 445 Score = 430 bits (1105), Expect = e-119, Method: Composition-based stats. Identities = 261/446 (58%), Positives = 344/446 (77%), Gaps = 1/446 (0%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD ++ + L G G AQ+ ++ +E + + ++ +++I E+W+ Sbjct: 1 MDIQLLYAIIGFLTGTLFGGSLIWLVIAQKMNKKESELRDFYSIQASYEEKIAHLEYWKI 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 ECE + E+RS + IN + E +LREV TR+E + ++K R ++NSEQRL+ QFENLAN Sbjct: 61 ECEHRDQELRSQREINRNQEVELREVMTRLEETRLAFEEKQRLLLNSEQRLNVQFENLAN 120 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 RIFE + RR EQNRQSL +LL+P REQLDGFRRQV +SF +EA+ERHTL HEIR LQQL Sbjct: 121 RIFEQNERRASEQNRQSLIALLTPFREQLDGFRRQVHESFSQEARERHTLAHEIRQLQQL 180 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 NA+MA+E INLT+ALKGD K QGNWGE +L+R+LEASGLR+G+E+ETQVSI N + SR Q Sbjct: 181 NAEMAKETINLTKALKGDTKIQGNWGETILSRILEASGLRQGHEFETQVSI-NTSNSRYQ 239 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVI+RLPQGKDVVIDAKM+L AYE YFN+ED+ R +AL+ H+ SVRNHI+ LGRKDY Sbjct: 240 PDVIIRLPQGKDVVIDAKMSLTAYEHYFNSEDEQQRATALRGHVNSVRNHIKELGRKDYH 299 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 QL GLR+LDYVLMFIP+EPA+L+AL PELI E L+NNI+LV P+TLLVA+RTI NLWR Sbjct: 300 QLNGLRSLDYVLMFIPLEPAYLIALREAPELIDEGLRNNILLVCPSTLLVAVRTINNLWR 359 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 YE QS+NAQ IA+RA+++YDKMRLF+DD+ +GQSL KAQ NY+ A+KKL+ G+GN+++Q Sbjct: 360 YERQSQNAQVIAERAARMYDKMRLFVDDIQVLGQSLSKAQLNYQSAIKKLAEGKGNLISQ 419 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQ 446 AE+ + LG+E+KR I+ + ++Q Sbjct: 420 AESLKELGIEVKRPIDTEFSKQTAKS 445 >UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRK2_DESAD Length = 474 Score = 420 bits (1079), Expect = e-116, Method: Composition-based stats. Identities = 161/448 (35%), Positives = 284/448 (63%), Gaps = 3/448 (0%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAEL---SAAKQQITQSEHWRA 60 + ++ ++G+ I + + A++K + ++ + +L + ++Q TQ + Sbjct: 16 LLGIFFAGLVLGMIISAVIGKRRLAEEKEKVEGLQDHLQEQLQLGARLEEQATQLPELKK 75 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E + L + ++L + ++ ++ +K+ + +++ LS++F++LA Sbjct: 76 ELAQQRAQKHKLTTAYSNLYGKYKATKANLDNEKKQGQEKLTLLQEAKEELSDKFKSLAG 135 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 I E +++ +QN ++ +L+PL ++ F+ QV+ ++ +E ++R L +++ L L Sbjct: 136 EILEEKSKKFTDQNATNIKQILAPLGVKIHEFQEQVEKAYFQEGKDRSELAAQVKQLMNL 195 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 N Q++ +A NLT+ALKG +KT+G+WGE++L RVLEASGLR+ +EY QVS +R+Q Sbjct: 196 NRQLSDDAHNLTKALKGQSKTRGDWGELILERVLEASGLRKDHEYTVQVSHTRQDGTRVQ 255 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDV++ LP+ K +V+D+K++L Y +Y AED+ RE AL+ HI S++ H++ L K+YQ Sbjct: 256 PDVVIHLPEEKHLVVDSKVSLTDYLKYTEAEDETKREVALKGHINSIKAHLKGLSTKNYQ 315 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 L G+++ D+V+MF+P+EPAF LA+ L EA N+++VSP+TLL +RT+A++WR Sbjct: 316 DLYGIKSPDFVIMFVPIEPAFALAISNDVALWQEAWNKNVLIVSPSTLLFVIRTVAHIWR 375 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 E Q++NAQ+IA+R + LYDK R F+DD+ +G+ + + QD+Y +A KL +G GN++ Q Sbjct: 376 QERQNQNAQEIANRGAILYDKFRNFVDDLEKVGERIRQTQDSYEKARTKLCNGSGNLIRQ 435 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDE 448 AE + LGV+ KR I DL E+A+ DE Sbjct: 436 AEMLKELGVKPKRSIKKDLTEEALGSDE 463 >UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatus Blochmannia floridanus RepID=Q7VRJ0_BLOFL Length = 491 Score = 414 bits (1065), Expect = e-114, Method: Composition-based stats. Identities = 208/395 (52%), Positives = 302/395 (76%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E+ ++LSA ++++ ++ + E +N ++ + N + E +L+E+ R+E + A + Sbjct: 77 ELNSKLSAVEERLKLISCYQQKYEQINAKLNIQLNTNHTQELELKELRIRLEEYKLSATE 136 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 K + +INSE RL+ QFENLANRIF+HS ++ EQNR +LN++L PL+EQL+ F++Q+QD+ Sbjct: 137 KEKLLINSENRLTMQFENLANRIFDHSRIKIHEQNRLTLNNVLYPLQEQLNTFKKQIQDN 196 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 F KE + R+ LT+EI NL QLN ++ QEAINLT+ALKG+NKTQGNWGEV+LTR LE SG+ Sbjct: 197 FSKEERMRNDLTYEIHNLHQLNTKITQEAINLTQALKGNNKTQGNWGEVILTRTLETSGM 256 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 REG+E+ QV+I+ ++QPDVIV LP GK+V+IDAK++L+AYERYFN D +++A Sbjct: 257 REGHEFHLQVNIQETNGRKLQPDVIVHLPNGKNVIIDAKVSLIAYERYFNYNDKKDKQTA 316 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 + +HI S+R HI+ L +K+YQ+L L+TLDY+LMFIP+E AF +A+++ P L+T+A+ N Sbjct: 317 MNDHIHSLRTHIKSLNKKNYQELFQLKTLDYILMFIPIESAFSIAIEKDPTLLTDAMNRN 376 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 IMLVSPTTLLVALRTI NLWRYEHQ+ +A++IA++A +LYDK+RLF++D++ IG L K Sbjct: 377 IMLVSPTTLLVALRTIHNLWRYEHQNLHAKKIAEKAGRLYDKLRLFMEDVNKIGFYLHKT 436 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 + Y A KLS G+GN++ Q E FR LGV+IK+ Sbjct: 437 ETMYNSAKNKLSEGKGNIITQIEGFRKLGVQIKQP 471 >UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax=Gammaproteobacteria RepID=RMUC_VIBCH Length = 513 Score = 414 bits (1064), Expect = e-114, Method: Composition-based stats. Identities = 251/500 (50%), Positives = 331/500 (66%), Gaps = 38/500 (7%) Query: 4 SIMVYAVIALVGVAIGWLF--------------------ASYQHAQQKAEQLAEREEMVA 43 GVAIGW Q QQ EQL ++ + Sbjct: 14 LWSALVSAGATGVAIGWWVKQRYQLKTQLLEQQLEQQSHWHAQQIQQLNEQLTTAQQELD 73 Query: 44 ELSAAK------------------QQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 EL A + +++ E + E + +E+ +++ LE+ LRE Sbjct: 74 ELDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLRE 133 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 R + + +K++ + +E+RL +QFE+LAN++FEH VD QNRQSL LL+PL Sbjct: 134 QEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTPL 193 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 +EQL+GF++QV DSF EA+ERHTL HE+RNLQ+LN QMA+EA+NLT+ALKGDNK QGNW Sbjct: 194 KEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQQGNW 253 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GEVVL RVL SGLREG+EY+TQVS++N+A R QPDVIV LPQ K VVID+KM LVAYE Sbjct: 254 GEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKMALVAYE 313 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 RYF+AE D R+SAL+EH+ ++RNHIR LG+KDY QL G+++LDYVLMFIPVEPAF +A+ Sbjct: 314 RYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVAI 373 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 P L+ +A++ NI+LVSPTTLLVALRTI NLWR E Q++NAQ IA+RASKLYDK+RLF Sbjct: 374 QADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRLF 433 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 ++DM +G +LDKA +Y+ AM KL +GRGN + QAE+F+ LGVEIKR I L E+A Sbjct: 434 VEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPLIERAQQ 493 Query: 446 QDEEYRLRSVPEQPNDEAYQ 465 ++ V P ++ Sbjct: 494 APDQENAPLVERHPIEDKVN 513 >UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepID=A4ST62_AERS4 Length = 446 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 219/434 (50%), Positives = 306/434 (70%), Gaps = 7/434 (1%) Query: 18 IGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINT 77 +GWL + Q+ E L +E A + + + + R + + ++ ++L Sbjct: 20 VGWLAGRRFASAQEQELLLTQERH----QALQDRFDELQDERMQGQQKLDQQQTLL---I 72 Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 L A L++ + + + A +K++ + EQRLS+QFENLANRIFE ++ + N+ S Sbjct: 73 KLTARLKDAEATLRSERLAAAEKLQLQRDGEQRLSQQFENLANRIFEQNSGNFRDLNQNS 132 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+ LL+PL+EQL+GFRRQV ++ +E +RH+L E+ L +LNA+M +EA LTRALKG Sbjct: 133 LDLLLTPLKEQLEGFRRQVGETHAQETAQRHSLKFELERLAELNARMTEEAAALTRALKG 192 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDA 257 D+K QGNWGEVVL R+L GLREG+EY TQV+IE D R QPDVIV LPQ KD++IDA Sbjct: 193 DSKQQGNWGEVVLARILSECGLREGHEYHTQVNIELDKGKRYQPDVIVHLPQEKDIIIDA 252 Query: 258 KMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPV 317 K++L AYER++N +D + AL+EH+ASVRNHIR LGRKDYQQLPG+RTLDYVLMF+ V Sbjct: 253 KVSLTAYERWYNTDDALEKAVALKEHVASVRNHIRELGRKDYQQLPGVRTLDYVLMFVAV 312 Query: 318 EPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 EPAFL AL+ P L+ L NNI+LVSPT L+VALRTI NLWRYE Q++NA+QIA+RA + Sbjct: 313 EPAFLTALEADPSLVRFGLDNNILLVSPTNLMVALRTIENLWRYERQNQNARQIAERAGR 372 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 LY+K+RLF+++M +G SL KAQ++Y +AM +L +GRGN++AQ E FR LGVE+ + + Sbjct: 373 LYEKLRLFVEEMQQMGGSLHKAQESYDKAMGRLVNGRGNLIAQVERFRELGVEVTKPLPE 432 Query: 438 DLAEQAVSQDEEYR 451 L +A+ +++ Sbjct: 433 TLVNRALEREDPAE 446 >UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDJ8_LARHH Length = 495 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 186/416 (44%), Positives = 267/416 (64%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 LA+ + + +E + ++ + A + + + Q + L A + TR++A Sbjct: 72 LAQLDALRSERAQLLERAGRLPELEAALQHSRGQQEAAQQLVAELRAQCAQAETRLQAEV 131 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 ++K+ + + ++LS QF N+AN + E +RR EQNR+SL ++L PLRE+L F R Sbjct: 132 AQGEEKLALLREAREQLSVQFRNVANELLEEKSRRFVEQNRESLGAVLEPLRERLGEFTR 191 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 +V+ S+ +EA+ER +L E+ L +LN +++ +A+NLTRALKG NK QGNWGEVVL VL Sbjct: 192 KVESSYAQEAKERFSLQQEVLRLAELNRKISDDAVNLTRALKGSNKQQGNWGEVVLESVL 251 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 E+SGLR G EYE Q S + R QPDV+V LP+G+D+VID+K+TL AY RY AE+D Sbjct: 252 ESSGLRRGQEYEVQTSFTREDGQRHQPDVVVHLPEGRDIVIDSKVTLTAYSRYVEAEEDA 311 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 R+ AL++H+ +VR H++ L K Y L LR+LD+VL+FIPVEPAF+LA+ EL + Sbjct: 312 ARQLALRQHLDAVRAHVKGLSAKRYDTLYDLRSLDFVLLFIPVEPAFMLAVTEDRELFAD 371 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A N++LVSP+TLL LRTIANLWR QS NAQ+IA +A LYDK FI D+ IG+ Sbjct: 372 AYARNVLLVSPSTLLATLRTIANLWRQAQQSHNAQEIARQAGALYDKFVGFIGDLDDIGR 431 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 L + + + A KLSSGRGN++ Q E R LGV+ + I E+A + D + Sbjct: 432 HLTQTRQAFDGACNKLSSGRGNLVRQTERLRELGVKPGKSIPAGWKEKAGADDADT 487 >UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN95_9GAMM Length = 492 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 193/453 (42%), Positives = 295/453 (65%), Gaps = 26/453 (5%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ---------------SEHWRAECEL 64 WL AQ+KA LA + + L+ A + + Q +E R L Sbjct: 39 WLDLEAAAAQEKANLLASEQAITLRLNEATEALQQLRSEQHHTELQRERLTERLRGIEPL 98 Query: 65 LNNEVRSLQSINTSLEAD----------LREVTTRMEAAQQHADDKIRQMINSEQRLSEQ 114 L V+ + + LE + E+ TR+EA ++ DK++ + + ++L E+ Sbjct: 99 LTTAVQEKKHLEKKLEQTAFQLADRSEVVAELETRLEAEREAHADKLKTLEQAREQLREE 158 Query: 115 FENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 F+N+ANRIF+ +++ + N+++L LL+PL++QL F+R+V+D + KEA++R L +I Sbjct: 159 FQNVANRIFDEKSKQFRDSNQENLGQLLNPLKDQLGDFKRKVEDVYDKEAKDRRALHEQI 218 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +L+ LN QM+++AINLT+ALKGD+K QGNWGEV+L R LE SGLR+GYE+E QV++ + Sbjct: 219 NHLRDLNQQMSEDAINLTKALKGDSKAQGNWGEVILERALEESGLRKGYEFELQVAVT-E 277 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 R PD ++ LP GKD+++D+K++L AYERY AED + L+EH+ SVR HI+ L Sbjct: 278 EGQRYLPDAVIHLPDGKDIIVDSKVSLTAYERYCAAEDPAEKARFLREHLLSVRGHIKGL 337 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K YQ L +R+LD+VL+FIP+E AFLLAL+++P L EA NIMLVSP TL+V LRT Sbjct: 338 SEKAYQGLSDIRSLDFVLLFIPIEGAFLLALEKEPALFKEAFDRNIMLVSPATLMVTLRT 397 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 I N+WRYEHQ++NAQ+IA R +L+DK F++ + IG++LD+ Q + A K+L+SGR Sbjct: 398 IHNIWRYEHQNQNAQEIAKRGGELHDKFVGFLESLDDIGRNLDRTQQAFDTAHKRLASGR 457 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 GN+++Q + LG E K++I+ +L ++A+ D Sbjct: 458 GNLVSQVAMLQKLGAEGKKQISKELVDRAIESD 490 >UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD Length = 429 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 205/401 (51%), Positives = 286/401 (71%), Gaps = 2/401 (0%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 ++ + +H +CE L E+ S + + L A R++A +DK+ M S Sbjct: 31 SQTVAARMKHVTKQCEQLQTELNSERIASAKLHAQNEAHQARIQALHTAHEDKLAAMNAS 90 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 EQRL QFENLANRIFE +R +Q + ++ ++L+P + +LDGF+RQ+ + +E QER Sbjct: 91 EQRLHTQFENLANRIFEEKQQRYTQQTKHNIEAVLAPFKNELDGFKRQISEQHIREGQER 150 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 +L EI +L+ LN ++ +EA LT ALKGDNK QGNWGEVVL R+L+ SGLREG+E+ET Sbjct: 151 ASLKTEILSLKALNQKITEEAAALTNALKGDNKKQGNWGEVVLERILKESGLREGHEFET 210 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q+S ++ R QPDV+V LP KDV+ID+K++L AYERYFN EDD + L +H+AS+ Sbjct: 211 QMSATSEQGKRFQPDVVVHLPNDKDVIIDSKVSLAAYERYFNCEDDTEKAQHLAQHVASI 270 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + HI+ LG KDYQ L G++TLDYVL+FIP+EPAFL+A++ +PEL+T AL +NIMLVSPT Sbjct: 271 KGHIKGLGAKDYQTLQGIKTLDYVLLFIPIEPAFLIAVEEEPELVTTALNHNIMLVSPTN 330 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 LLVALRTI N+W+YE+Q++NAQ IAD+A+KLYDK F+ DM +G+S+D A +Y QAM Sbjct: 331 LLVALRTINNIWQYEYQNQNAQLIADQAAKLYDKFVGFVTDMEKVGKSMDSAHTSYEQAM 390 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 KL+SGRGN++ Q E FR LGV+ + ++ L Q +SQD+ Sbjct: 391 NKLTSGRGNIVRQIEKFRELGVQPSKRMSQHL--QQLSQDD 429 >UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U2A2_MARAV Length = 548 Score = 408 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 194/459 (42%), Positives = 295/459 (64%), Gaps = 8/459 (1%) Query: 19 GWLFASYQHAQQKAEQLAER-EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINT 77 G L S +H +Q++ L R + +EL+A + ++ Q +E +L Sbjct: 93 GQLEQSIEHWRQQSAALENRLAALASELTAKQDRVAQ---LASESGQYQQRAETLSEELG 149 Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 L+ +LRE ++ ++ A +K+ + + L ++FENLANRIFE + R +Q++ S Sbjct: 150 QLKVELREQQVTLDKERRSASEKLELLEKNRDALKQEFENLANRIFEQKSERFSQQSKTS 209 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+SLL+P R+QL FR++V+D + E ++R L EI++LQ+LN Q+ +EA NLTRALKG Sbjct: 210 LDSLLNPFRDQLQDFRKRVEDVYTTETRDRQALRSEIKSLQELNRQITEEAANLTRALKG 269 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDA 257 D K QGNWGE++L RVLE SGLR+G EYETQ S ++ ++PDVIV LP +++VID+ Sbjct: 270 DKKIQGNWGELILERVLERSGLRKGVEYETQGSYRDEDNQLLRPDVIVHLPDQRNLVIDS 329 Query: 258 KMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPV 317 K++LVAY+++ A+ + R +AL++H+ +VRNHIR L KDY QL GL + D+VL+F+P+ Sbjct: 330 KVSLVAYQQWVTADQEEERAAALKQHVEAVRNHIRTLSEKDYSQLNGLHSPDFVLLFMPI 389 Query: 318 EPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 EPAF+ A + L EA + I++V+PTTLL LRTI N+WRYE QS+NA++IADRA Sbjct: 390 EPAFVAAFQQDENLFAEAFERKIIVVTPTTLLATLRTIENIWRYERQSQNARRIADRAGA 449 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 +YDK+R+F++ M +G L AQ Y AM L+ GRGN+++QA F LGV +K+E+ Sbjct: 450 VYDKLRVFVEAMEKLGSQLHTAQGTYDNAMNTLTRGRGNLISQANRFVELGVRVKKELPK 509 Query: 438 DLAEQA----VSQDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 + +QA DE ++ +P D R ++ + Sbjct: 510 SIVDQAEVDSEDADEPGDTPAIDRKPTDAGEARAEDQQE 548 >UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9B0_9GAMM Length = 472 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 160/458 (34%), Positives = 273/458 (59%), Gaps = 11/458 (2%) Query: 4 SIMVYAVIA--LVGVAIGWLFASYQHAQQ-----KAEQLAEREEMVAELSA----AKQQI 52 V+ +++ LV IG LF S QQ + L + + A L+A + Q+ Sbjct: 10 QAFVFGLLSTVLVSTVIGTLFWSRWRRQQLLLEEMQQALHQERSLSARLAAENAGLQVQV 69 Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 Q +A+ + ++ LQ +LE+ L ++ R E+A+ H ++++ + +S ++L Sbjct: 70 RQLTELQAQLTAKDQQLNLLQREVRTLESRLADINARAESAKAHHAEQLQLLNDSREQLK 129 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 F LAN IFE +R EQ++ S+ +LL P Q++ FR++V D ++ + R L Sbjct: 130 RDFGQLANDIFEQKQQRFSEQSKASITALLDPFHRQIEQFRQRVDDIHSRDVEGRSQLLT 189 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 ++ L+ +N+Q+ ++A +LT+ALKGD K QGNWGE+ + R+LE+SGL++G E+E + + + Sbjct: 190 QLSVLKDMNSQLNRQADDLTKALKGDKKLQGNWGELQIERILESSGLQKGREFEREANYK 249 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 +D +PD I+ LP GK ++ID+K++L AY++ A+D+ TR +ALQ H+++VR+HI Sbjct: 250 DDQGQNRRPDFIIHLPDGKHIIIDSKVSLNAYQKAVAADDEATRNTALQAHVSAVRHHIH 309 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K+Y L GL + D+VLMF+PVE AF+ A ++ +L EA + +I++V+PTTLL L Sbjct: 310 ALSAKNYPGLSGLNSPDFVLMFMPVESAFIAAFEQDSQLFNEAFERHIVVVTPTTLLATL 369 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 RT+ANLW E Q+ NA+++ A K+YDK+ +F M +G + A + +A+ S Sbjct: 370 RTVANLWVLERQNENAKELYALAGKIYDKVAVFSRKMDKLGTQIQSADRTFHEALNTFSD 429 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 GRG++L+ E + +G + I+ + V +D Sbjct: 430 GRGSMLSYVERLKEMGAPTSKSISDTHRPRMVGEDAPE 467 >UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTA9_CHRSD Length = 500 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 184/438 (42%), Positives = 275/438 (62%), Gaps = 9/438 (2%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 +A E + A+L AA++Q +++ +CE E+ Q +L + T+ Sbjct: 57 RARLERELAQSDAQLDAAREQGLETQRRLTQCE---RELGDRQEQLATLRERHGRLETQR 113 Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 E H +K+ + + RL++ FE LA RIFE + Q+R+SL +LL+P REQ+ Sbjct: 114 EQEHAHHAEKLALLEEARTRLTQDFEALAGRIFEERQQAFSAQSRESLETLLAPFREQVG 173 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 FR ++++ G+ +ER +L +I +L LN Q+ +EA NLTRALKGD K QG+WGEV+L Sbjct: 174 DFRARLEEIHGQSLRERSSLKTQIEHLATLNRQITEEASNLTRALKGDKKMQGDWGEVML 233 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNA 270 VLE SGLR EY+ +VSIE DA R +PD ++ LP + +++DAK++L AY RY NA Sbjct: 234 ESVLERSGLRRDIEYKREVSIEGDAG-RQRPDAVIYLPDQRHLIVDAKVSLNAYVRYVNA 292 Query: 271 EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPE 330 EDD TR AL+ H+ +VR HI L +DY +LPGL + D+V +F+PVEPAF +A Sbjct: 293 EDDATRAQALRAHVQAVRGHIEALSGRDYPRLPGLNSPDFVFLFMPVEPAFAVAFQHDET 352 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L +A +I++V+PTTLL +LRT+A+LW E Q+ NA+ IA+RA KL DK R F+D + Sbjct: 353 LFHDAFARDIVVVTPTTLLASLRTVASLWTLERQNDNARVIAERAGKLLDKFRGFVDSLE 412 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 +G+ L++A +YRQAM +LS+G+G++++QA + LGV +KR++ P+ Q V D E Sbjct: 413 EVGRHLERADGSYRQAMGRLSTGQGSLVSQALMLKRLGVRMKRDL-PEHLTQGVDDDSE- 470 Query: 451 RLRSVPEQPNDEAYQRDD 468 +V E + E DD Sbjct: 471 ---AVSEDESGEPGGADD 485 >UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Alteromonadales RepID=Q12LQ0_SHEDO Length = 522 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 198/408 (48%), Positives = 289/408 (70%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD 98 E ++A++S + Q ++ + ++ Q + A + + + Q+ Sbjct: 85 EVLIAQVSKVEAQAERATSLETQLSDTQRKLMESQLALSKSNAMQQTILIKSRTEQEALQ 144 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 DKIR + +E RL+ QFENLANRIFE + +QN ++S+L PL++QL+GFR+Q+ + Sbjct: 145 DKIRLLETAEARLTVQFENLANRIFEERSENFKQQNVSQIDSVLGPLKQQLEGFRQQINE 204 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 S+ E ER L H++ +L +LN +M+Q+A+NLT ALKGDNK QGNWGEV+L RVL+ SG Sbjct: 205 SYTHEQSERSALKHQLTHLHELNMKMSQDAVNLTNALKGDNKQQGNWGEVILERVLQESG 264 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRES 278 LREG+EY+TQ +++D R +PDVIV LP+ KDVVIDAKM+L+AYERYFN+ D+ ++ Sbjct: 265 LREGHEYQTQQELKDDNGKRFKPDVIVHLPEQKDVVIDAKMSLIAYERYFNSSDESHKQQ 324 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN 338 AL+EH+ S+R HI+ L +KDY +L GL++LDYVLMFIP+EPAFLLA++ P +I AL+ Sbjct: 325 ALKEHVISIRQHIKGLSQKDYHKLHGLKSLDYVLMFIPIEPAFLLAIEHDPSIINFALEQ 384 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 NIMLVSPT LLVALRTI N+WRYE+Q++NAQ IA +A+K+YDK FI+DM +G++L+ Sbjct: 385 NIMLVSPTNLLVALRTINNIWRYEYQNQNAQTIAKQAAKMYDKFCGFIEDMDKVGRALEG 444 Query: 399 AQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 A+ +Y+ AM KLSSG+GN++ QA + LGV+ ++++ A+S Sbjct: 445 AEKSYQSAMGKLSSGKGNLVRQAHLMQKLGVDTSKQLDKHKVNLALSD 492 >UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A440_PELCD Length = 462 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 180/454 (39%), Positives = 289/454 (63%), Gaps = 5/454 (1%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKA-EQLAEREEMVAELSAAKQQIT----QSEH 57 ++A G +G LFA+ ++ A +Q A R+E + + ++++ + Sbjct: 1 MEWFIFAGAFCAGSVLGVLFAAMFLQRRSATDQQAFRQEAASIQAVLEERLAARSQEIAS 60 Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 E E T+ A + T++ ++ A +K++ + ++++++ +F++ Sbjct: 61 LLERLEKSQQERMRTAQALTAATASQASLETKLAEERKQAAEKLQLLNDAKEQMKLEFQS 120 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 LA RIFE +R + +Q+R +L+ LL P R QL F ++V +++ +EA+ER +L EI L Sbjct: 121 LAYRIFEDKSRNLVDQSRSNLDQLLHPFRAQLKDFEKKVDETYQREARERFSLRQEIVRL 180 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 Q+ N Q+ +AINLT ALKG KTQG WGE+VL R+LE SGL +G EYE Q S + Sbjct: 181 QECNQQIQTDAINLTNALKGQVKTQGIWGEIVLERILEQSGLHKGREYEAQGSFRDAQGR 240 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +++PD++V LP+ KD+V+D+K++L+AYERY NA +D R AL++H+ S+ +HI+LL K Sbjct: 241 QLRPDIVVHLPENKDIVVDSKVSLIAYERYVNASEDEQRSLALRQHLTSLHSHIKLLQSK 300 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 YQ LPGLR+LD+VLMFIPVE AF+LAL+ L +A N+M+VSP+TLL+ LRTI N Sbjct: 301 HYQALPGLRSLDFVLMFIPVEGAFMLALEEDETLFRKAFAQNVMIVSPSTLLLTLRTIQN 360 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 +WRYE+Q++NA +IA +A LYD F++D+ IG L+K + Y QA K+L++GRGN+ Sbjct: 361 IWRYEYQNQNAVEIARQAGNLYDHFVRFVNDLEKIGDLLEKTRQTYGQAHKRLTTGRGNL 420 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 + +AE+ R LG++ + ++P + E A ++ Sbjct: 421 VRRAESLRQLGIQNSKVLSPIIRENARIDLDDTD 454 >UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCG4_HAHCH Length = 507 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 187/492 (38%), Positives = 290/492 (58%), Gaps = 29/492 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 + ++ + A+I ++ ++AQ + LA EE+ A ++ + E + Sbjct: 16 IGLAVALLALIGMMRQRRQRRDLELRNAQIIEKLLAREEEVARLQEACAEKTQRCESMQR 75 Query: 61 ECELLNN----------------------------EVRSLQSINTSLEADLREVTTRMEA 92 E +L + L ++ +++L + T Sbjct: 76 EVGVLQQSNAAVRARMESIHERYVQVEAAAKDKDANLSELTQALSAAQSELASLKTAAAK 135 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 Q H +K++ + S + L+++F+ LANRIFE S +++ E ++ +L ++L PL QL+ F Sbjct: 136 EQLHHQEKLKLLEASREALTQEFQLLANRIFESSTQKLSEFSQNNLKTILDPLNTQLNDF 195 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 R++V+D + KEAQ+R +L+ EI+ LQ LN +++ +AI LT ALKGDNK G WGEV+L R Sbjct: 196 RKKVEDVYDKEAQQRFSLSAEIKKLQTLNERISDDAIKLTNALKGDNKAAGTWGEVILER 255 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 +LE SGL +G EYE Q + N+A R+QPDVI+RLP+ K+VV+D+K++LVAYE+Y NA D Sbjct: 256 ILERSGLVKGREYEVQSAQRNEAGRRIQPDVIIRLPENKNVVVDSKVSLVAYEQYHNASD 315 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 D R L++H+ SVR HI+ L K YQ GL +LD+VL+FIP+E AF A+ L Sbjct: 316 DSARIDYLKQHVLSVRQHIKGLSGKRYQDALGLNSLDFVLLFIPIEGAFAAAVQGDQSLF 375 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 EA + N+++VSP+TLL LRTI N+WRYEHQS+NAQ+IA +A LYDK F+ D+ + Sbjct: 376 NEAFQLNVVIVSPSTLLATLRTIHNIWRYEHQSQNAQEIARQAGYLYDKFVNFVQDLEEV 435 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 GQ L + Q Y AM +L++GRGN++ + E + LG ++++ ++A EE Sbjct: 436 GQRLQQTQGAYDTAMGRLATGRGNLITRVEKLKQLGARAGKQLSESTLQRA-QMSEEGDS 494 Query: 453 RSVPEQPNDEAY 464 R+V D A Sbjct: 495 RTVSLSLGDGAG 506 >UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYL9_DESAC Length = 446 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 171/442 (38%), Positives = 272/442 (61%), Gaps = 6/442 (1%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 ++ A+ +A+ + + + R + L + ++ + + Sbjct: 9 WLWGCGAIGLLALVYAWGRLIFLRGL------RRRLDESLVRVDESQRLTQVLQQQLADR 62 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 + R+LQ E+TTR+E +Q + +K ++ ++++L++QF+ +A IF+ Sbjct: 63 EQQNRALQQAVEHARLQTAEMTTRLELERQQSAEKQALLLEAKEQLTQQFKVVAGEIFDE 122 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 R+ E NR+ L+ LL+PLR+QLDGFR++V D + +ER TL E+ L+ LN QM+ Sbjct: 123 RGRQFKEVNREELSQLLTPLRQQLDGFRQKVDDVHVTDVRERATLRQELEQLRGLNQQMS 182 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 ++A LTRALKGD K QGNWGE+VL R+LE SGLR G EYE Q S + ++PDVI+ Sbjct: 183 EDARQLTRALKGDRKVQGNWGELVLERLLEQSGLRRGVEYEVQGSFRDADNRLLRPDVII 242 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 LP+GKD+++D+K++L +YER +D R+ L++H+ +V H+ L K Y L G+ Sbjct: 243 HLPEGKDIIVDSKVSLSSYERSCREDDPEQRQQCLKQHVQAVCQHVLGLSEKHYANLKGV 302 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 R+LD+V+MF+P+E A ++AL + EL EA ++++VSPTTLL LRTI N+WR+E Q+ Sbjct: 303 RSLDFVVMFMPIEAALVVALQQDGELFNEAFDRHVVMVSPTTLLATLRTIENIWRFERQN 362 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 +NAQ IAD+A +YDK+R F+++M +G LD Y AM KLS GRGN+++QA F Sbjct: 363 QNAQAIADKAGAIYDKLRGFVEEMEKLGTQLDTVGHTYTAAMNKLSQGRGNLISQASRFV 422 Query: 426 GLGVEIKREINPDLAEQAVSQD 447 LGV++K+ + + E+A + Sbjct: 423 DLGVKVKKTLPATVMERAELDE 444 >UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassified Gammaproteobacteria RepID=A4A943_9GAMM Length = 477 Score = 397 bits (1020), Expect = e-109, Method: Composition-based stats. Identities = 148/465 (31%), Positives = 251/465 (53%), Gaps = 2/465 (0%) Query: 6 MVYAVIALV-GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +VYA+ L+ G I WL+ + ++ + + A+RE + A +++ E + + Sbjct: 11 LVYAIAGLIFGAIIAWLWRGAELSKTRGDLDAQRERLQELEIAHASLLSEREVLAEQFQS 70 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 +N V LQ SL ++ R A Q+ +++ + S+Q+L+ +FENLANRIFE Sbjct: 71 MNERVTELQLERNSLATTNAGLSARQTADQEKHKEQLALLERSKQQLAIEFENLANRIFE 130 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 ++ + N+QS+ SLL P EQ+ F+ ++ + + + +L E+R + + +M Sbjct: 131 ERGKKFSQDNQQSMESLLKPFGEQIHRFQSRINEVHAQSIRGNESLAGELRTMMGVGLKM 190 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 + +A NL +ALKGD KT GNWGEV L R L+ +GL G YE Q S + PD + Sbjct: 191 SDQAENLAKALKGDKKTTGNWGEVQLERTLQLAGLEPGSHYEAQSSFRDSEGRLRIPDFV 250 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 ++LP GK ++ID+K++LV Y+R AE D R AL+ H A+++ HI L KDY L G Sbjct: 251 IKLPDGKHLIIDSKVSLVDYDRAVAAESDEERNEALKAHGAALKRHIDDLSSKDYSALSG 310 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + + + V MF+P+E A++ AL EL + + N+++VS TTLL LRT+A+LW Sbjct: 311 MNSPELVFMFMPIEAAYIEALKFNRELFNDGYQKNVIMVSHTTLLPMLRTVASLWIAFRS 370 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + A++I+ A +Y+K+ L + + +G++L A D Y + + L +G + + E F Sbjct: 371 NEEAREISGMAGDIYNKVCLVGNRLEDMGKTLSTATDKYNKTVTALVGKQG-LYGKVERF 429 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDE 469 + K E+ + + + ++ + P A D E Sbjct: 430 KSTAANAKGELPKPATQHPNIEHDRLKILTEDTPPQLTAADADKE 474 >UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=A4SV40_POLSQ Length = 424 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 165/377 (43%), Positives = 244/377 (64%) Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 SL++ + + +++ ++ +I + +++ L+ QF+NLAN I E ++R Sbjct: 48 SLRTERDQALQNAIRLEAELDSERKQGLGRIESLNEAKEALTSQFKNLANEILEDKSKRF 107 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 EQN SL++LL PL+ +L F+ QV S+G EA+ER L EI L LN +M+ E + Sbjct: 108 TEQNAASLDALLKPLQTKLTEFKEQVSTSYGNEARERFALKSEIERLANLNLRMSDETRS 167 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 LT+ALKGD+K QGNWGE+VL +LE+SGLR+G EY Q S SR+QPDV+++LP+G Sbjct: 168 LTQALKGDSKVQGNWGELVLESILESSGLRKGEEYVVQDSHTQTDGSRLQPDVVIKLPEG 227 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 + +V+D+K+++ AY R+ D E L HI S+R HI+ L K+Y L G+ ++D+ Sbjct: 228 RSLVVDSKVSITAYARHAETTDPELAEKELAAHIQSLRQHIQGLSGKNYSSLYGVGSVDF 287 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 VLMF+P+EPAFLLAL P L EAL NI+LV P+TL+ LRT+A+LWR +HQ+RNA + Sbjct: 288 VLMFVPIEPAFLLALKTAPNLYQEALAKNIVLVCPSTLMATLRTVAHLWRQDHQNRNALE 347 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 IA + LYDK F+DD+ +GQ LD+AQ +Y A KL +G+GN++ AE R LGV+ Sbjct: 348 IAKQCGNLYDKFVGFVDDLEKLGQRLDQAQTSYHDAFNKLKTGKGNLIRSAEKVRELGVK 407 Query: 431 IKREINPDLAEQAVSQD 447 + ++ L E + D Sbjct: 408 PSKNLSTPLIESSAEND 424 >UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ80_9BACT Length = 453 Score = 394 bits (1013), Expect = e-108, Method: Composition-based stats. Identities = 169/431 (39%), Positives = 264/431 (61%), Gaps = 4/431 (0%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL----LNNEVRSLQSI 75 W +Y+ K E+ + EL+AA Q+ + E E E+ L+ Sbjct: 18 WFIQAYRLRTPKGLAEEEKAALEDELAAAAQEKAKLEERSRSLEESFGGAKEELVQLRDE 77 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 NT L L R+ + + ++ ++ +++L+ +FE LA R+ + ++ + +N+ Sbjct: 78 NTGLNRKLAGADERIHSMETRIAEQKAELAELQKKLTAEFETLATRVLDANSEKFAIRNK 137 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +S++ LL+PL E++ FR +V+ + + ++R L +++ L +LN +M+ EA NLT AL Sbjct: 138 ESIDKLLAPLSEKITDFRSRVETTHDQSVKDRAELVAQLKTLGELNQKMSTEAHNLTTAL 197 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KG KTQGNWGE+VL VLE SGL EG EY TQ S ++ R QPDV++ LP+GK +V+ Sbjct: 198 KGQTKTQGNWGELVLGTVLEKSGLMEGREYLTQASFVSEDGKRQQPDVLIVLPEGKHLVV 257 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 DAK++LVAYER N E + RE+AL++HI SV+NH+ L +K Y L +++ D+VLMF+ Sbjct: 258 DAKVSLVAYERCVNEESETKREAALKDHIQSVKNHVAELSKKRYDALYEIQSPDFVLMFV 317 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 PVEPAF++A+ L A + N++LV+P+TLL LRT+AN+WR E Q+RNA IA R+ Sbjct: 318 PVEPAFIMAIQADDTLFDFAFRQNVVLVTPSTLLATLRTVANIWRQEKQTRNALDIAQRS 377 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 LYDK F +DM IG+ + ++Q Y AM KLS GRGN++ Q ++ + LG + K+ + Sbjct: 378 GALYDKFVGFFEDMKKIGEQIGRSQVAYDSAMNKLSIGRGNLVNQVQSLKELGAKAKKAL 437 Query: 436 NPDLAEQAVSQ 446 + E A + Sbjct: 438 PAETVEGAGEE 448 >UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDB3_9GAMM Length = 490 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 184/462 (39%), Positives = 293/462 (63%), Gaps = 12/462 (2%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 +++ ++ +A + + I + + + +L+ +++ E Sbjct: 11 LEWLLLAAFGLATIALLISFFIVLRSRRAVARNERDSEQASQQQLAIMREKYLLLEVRSE 70 Query: 61 ECELLNNEVRSLQSINTS----LEADLRE-------VTTRMEAAQQHADDKIRQMINSEQ 109 + + LQ L+A L E + T + QQ ADDK++ + + Q Sbjct: 71 NKAEHISRLNDLQKEREQQIVLLQASLMEQKEASAILRTELAQYQQSADDKVKTLEETRQ 130 Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT 169 +L+ FE LANRIFE + R + ++ SL++ LSPLREQL F+++V+D + K+++ER + Sbjct: 131 QLNRDFELLANRIFEEKSERFNRNSQTSLDTALSPLREQLKDFKQKVEDVYDKDSKERVS 190 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L+ E+ L+QLN QM+ +A+NLT ALKGDNKTQGNWGEV+L RVLE SGL +G EYETQ+ Sbjct: 191 LSAELGQLKQLNQQMSVDALNLTNALKGDNKTQGNWGEVILERVLEESGLHKGREYETQI 250 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 S++++ R QPDVIVRLP+ KD++ID+K++LV YERY N+ +D R+ AL++H+ASV+N Sbjct: 251 SLKSEQG-RGQPDVIVRLPEDKDLIIDSKVSLVHYERYCNSSEDDQRQQALKDHVASVKN 309 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 HIR L +K+Y+ L G+RTLD+VL+FIP+EPAF+ A + + EA + NI++V PTTLL Sbjct: 310 HIRDLSQKNYEGLEGIRTLDFVLIFIPIEPAFMAAFEHDQSMFREAYEKNIIVVGPTTLL 369 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LRTI ++WRYE Q++NA++IA +A ++DK F++DM I + L KA + A+ K Sbjct: 370 ATLRTIQSIWRYERQNKNAEEIARQAGAMHDKFVGFVNDMGKIEEHLSKASQAHEDALNK 429 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 LS G+GN++ + LG ++K+ + + ++ V +++ Sbjct: 430 LSKGKGNLVGSTQRLEKLGAKVKKSMPNSVVDEQVFEEDVSE 471 >UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MYU2_9GAMM Length = 507 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 166/428 (38%), Positives = 266/428 (62%), Gaps = 1/428 (0%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 Q+ Q E + +L + +TQS + + + SL + L+ L Sbjct: 81 HQQNVAQIESLRNELSQAQGQLKHNEAVLTQSAKDAQKLIEKEHRIESLNQEISELKTAL 140 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 ++ E Q+ +K+ + ++++LS++FENL+N+IF+ ++ ++ +++ L+SLL+ Sbjct: 141 KQEQVEREKEQESLHEKLALLEQNKKQLSQEFENLSNKIFDEKYKQFNQTSKEGLSSLLN 200 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P ++QL+G R++V D + E+++R +L +I L +LN Q+ +EA LTRALKG+ KTQG Sbjct: 201 PFKDQLEGLRKKVDDVYVAESKDRASLKAQIGELHKLNRQITEEASALTRALKGEKKTQG 260 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGE+VL VLE SGLR G EY + SI N R +PDVI+ LP+ K +++DAK++LVA Sbjct: 261 NWGELVLETVLEKSGLRAGEEYVREKSI-NTEGDRYRPDVIINLPENKHIIVDAKVSLVA 319 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y Y NAE D R+ L+ H+ +V+ HI+ L K Y QLPG+ + D+V +F+PVEPAF++ Sbjct: 320 YTDYVNAETDDERQQHLKTHVQAVKAHIKALSEKPYDQLPGVNSPDFVFLFMPVEPAFMV 379 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A L EA + I++V+PTTLL +LRT++NLW E Q+++A+Q+A++A K++DK+ Sbjct: 380 AFQYDDSLFNEAFEKRIVVVTPTTLLASLRTVSNLWSIERQNKHAKQLAEQAGKVHDKLV 439 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F++ M +G L Q Y A +L GRGN+L+QA F+ LGV K+E+ + E A Sbjct: 440 GFVESMEKVGAQLTTVQKTYDTAWNQLKEGRGNLLSQAHKFKDLGVRSKKELPKHVMETA 499 Query: 444 VSQDEEYR 451 + E Sbjct: 500 ELEFSEDD 507 >UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=A2SP89_METPP Length = 640 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 182/422 (43%), Positives = 281/422 (66%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 + A E ++ + + +AE L +L + + A+L E+ TR E Sbjct: 198 REAAGREAGRLMAELLAEREAHDKAKAELTGLKTAKDTLDAKVVEMTAELTELRTRSEQD 257 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 +QHA++K+ ++N++ LSEQF NLAN I E ++R EQN+ SL LL PLR QL F+ Sbjct: 258 RQHAEEKLELLVNAKNALSEQFRNLANDILEDKSKRFAEQNQASLGQLLEPLRNQLSEFK 317 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +V++ + +E ++R L +++ L +LN ++Q+A NLT+ALKG KTQGNWGE++L RV Sbjct: 318 GKVEEVYVQEGKDRSALAQQVKQLVELNQTLSQDAKNLTQALKGQAKTQGNWGELILERV 377 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 LEASGLR+G+EY+ Q S SR+QPDV++ LP+ + +V+DAK++LVAY+RY +AE D Sbjct: 378 LEASGLRKGFEYKVQDSQTLADGSRLQPDVVIELPEDRKLVVDAKVSLVAYDRYVSAETD 437 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 +R +A+++H+ SVR HI+ L K YQ+L G+++ D+VL F+PVEPAF+LA+ EL Sbjct: 438 ESRSAAVKQHLGSVRAHIKSLSDKRYQELYGMQSPDFVLAFVPVEPAFMLAVTHDSELFM 497 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 +A +++LVSP+TLL +RT+A+LW+ E QSRNAQ IA R ++LYDK+ F+ D+ +G Sbjct: 498 DAWNRSVLLVSPSTLLFVVRTVAHLWKQEFQSRNAQDIAKRGAELYDKLCGFVGDLQKVG 557 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 + L++A+ Y +A KLS+GRGN + QAE + LGV + + L + A S +EE + Sbjct: 558 ERLEQAKTAYDEAQSKLSTGRGNAIRQAEMLKKLGVRPSKALPAALVQDAGSDEEEIVVP 617 Query: 454 SV 455 ++ Sbjct: 618 AL 619 >UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRK6_9GAMM Length = 469 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 159/460 (34%), Positives = 274/460 (59%), Gaps = 6/460 (1%) Query: 8 YAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL-- 65 A+ +V A+ + + ++++ + + E + + E E Sbjct: 12 AALSGIVVAALVFWGLQARQSKRERDHTETNNALALENRELTTRCESLQEQVKEREQRLE 71 Query: 66 --NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIF 123 E++ L L+A T + ++ DDKI+ + +++Q+L ++F+NLAN+IF Sbjct: 72 KERAEIKELAERYQDLQAQYTHTKTTLHEKERQFDDKIKLLEDNKQQLKQEFQNLANKIF 131 Query: 124 EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 E + ++ ++QSL++LL P ++QL F+ +V++ +E ++ +LT +I++L++LN + Sbjct: 132 EDKGKAFNDLSQQSLDNLLKPFKQQLTDFKTRVENIHHQETTQQASLTEQIKSLRELNQK 191 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 + +EA NLT ALKG+ KTQGNWGE +L +L+ SGL +Y +VS++ + R +PD Sbjct: 192 ITEEAQNLTTALKGEKKTQGNWGEYILENILDKSGLVRDRDYRREVSLKTEEGQRQRPDA 251 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 +V LPQ K ++IDAK++L A+ RY +E D R AL H+A++++ ++ L K+Y L Sbjct: 252 VVYLPQSKHLIIDAKVSLNAWTRYIESETDDERRIALNAHVAAIKDRVKELSDKNYFDLN 311 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 GL + + V MF+P+E AF AL +L AL+NN+++ +PTTLL +L ++ LWR+E Sbjct: 312 GLNSPEVVFMFVPIESAFAAALSHDRDLALNALENNVLIATPTTLLTSLNIVSQLWRFED 371 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 Q++++ +A+RA K+YDK+R F+D M +G L AQ +Y AM +L+SGRGN++ QA Sbjct: 372 QNKHSALLAERAGKVYDKLRSFVDSMDKLGNQLGSAQKSYDTAMGQLTSGRGNLIKQASD 431 Query: 424 FRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 F LGV ++ E+ +L E+A E + NDE+ Sbjct: 432 FEKLGVSVRAELPRELVEKADL--ELGHEEGGDAEMNDES 469 >UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJZ5_9BACT Length = 475 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 172/467 (36%), Positives = 284/467 (60%), Gaps = 20/467 (4%) Query: 6 MVYAVIALVGVAIGWLFAS------------YQHAQQKAEQLAEREE----MVAELSAAK 49 +VYA++ L+ A F + + +A+ AE+EE E+S + Sbjct: 3 IVYALLGLIIGAAIMFFLKKDSGTSRELEIELEKLRDQAKSTAEKEEKIQVQQNEISTLR 62 Query: 50 QQITQSEHWRAECELLNNEVRSLQSINTSLEAD----LREVTTRMEAAQQHADDKIRQMI 105 ++ S E + L + +TS + + T+M+A + D+K++ + Sbjct: 63 AEVASSTSLLNERQKLISRFEDEAQKSTSQLQEIITLNATLKTQMQADRTLHDEKLQSLK 122 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 S++ LS F+ +AN+IFE ++ + N++ L+ L PL+EQ+ F +QVQD + KEA+ Sbjct: 123 ASKEELSRNFKEIANKIFEEQSKNQSQANKEKLDLTLKPLKEQIHTFSKQVQDCYNKEAK 182 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 ER +L EI++L++LN +M+++A+ LT+ALKGD+K +G WGE++L RVLEASGLR G EY Sbjct: 183 ERFSLEKEIKSLKELNTRMSEDALQLTKALKGDSKARGTWGELILERVLEASGLRNGSEY 242 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 TQV+ + R PD IV LP K ++ID+K++LVAYE+Y ++ D+ R + + H+ Sbjct: 243 FTQVTETAEDGKRYMPDAIVHLPDEKQIIIDSKVSLVAYEKYCSSADEDERLTLRKAHLD 302 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 SV+NHI+ L K Y+ LPG+ +LDYVL+F+PVE AF LA++ +L +A K NIMLVSP Sbjct: 303 SVKNHIKELSDKSYENLPGINSLDYVLLFMPVEGAFRLAVEADEKLFLDAYKKNIMLVSP 362 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 +TLL+ LRTI+ +W++E+Q+RN Q I D+A LY K +++ +G+ +++A+ Y Sbjct: 363 STLLITLRTISKIWQFENQNRNTQAIVDKAEALYSKFVGYVESFQKVGKGIEQARKAYDS 422 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 A +L +GRGN++ ++ LG++ K+ + ++ +A L Sbjct: 423 AEGQLMTGRGNLIRTCKSLEELGIKSKKAMPKEVLHKADMDFSSPEL 469 >UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0V3_9NEIS Length = 531 Score = 389 bits (1000), Expect = e-107, Method: Composition-based stats. Identities = 179/427 (41%), Positives = 270/427 (63%), Gaps = 6/427 (1%) Query: 29 QQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTT 88 + + E + ++L+A +Q Q E + + L T L A +E+ T Sbjct: 105 RAIEQLTRELRDTASQLAARAEQGRQLEASQLQVIKERELATRLAEDITRLTAREQELVT 164 Query: 89 RMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 ++ +Q +K+ + +++ LS QF+ LA+ I E +RR EQN+++L SLL+PL E+ Sbjct: 165 TLDKERQQTREKLVLLDEAKEALSNQFKALASEILEEKSRRFTEQNKENLGSLLTPLHER 224 Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG-DNKTQGNWGE 207 + F + VQD++ K+++ER TL E+R LQ+LN ++ +A+ LT AL G ++K QG WGE Sbjct: 225 IQNFGKLVQDTYDKDSKERLTLEQELRRLQELNTRLNHDAVALTNALTGANSKAQGTWGE 284 Query: 208 VVLTRVLEASGLREGYEYETQVS----IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 +VL +VLE SGL + EY QVS E+ + R QPDV++ LP+GK +V+D+K++L A Sbjct: 285 MVLEKVLETSGLHKDREYRVQVSDTVETEDGSSRRYQPDVVIDLPEGKQLVVDSKVSLNA 344 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y RY A DD RE+ L+ HIA++R HIR L K YQ L L TLD+V MF+PVEPA+LL Sbjct: 345 YVRYTAAGDDVLREAELKAHIAAIRAHIRTLSEKRYQDLYKLNTLDFVFMFVPVEPAYLL 404 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A+ L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ+IA ++ +YDK Sbjct: 405 AVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQSGAMYDKFV 464 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL-AEQ 442 F+D M +G+ LD +D + AMKKL SGRGN+++ AE R LG++ +++ L E Sbjct: 465 GFVDSMEKLGKQLDTTRDTFGDAMKKLQSGRGNLISSAEKLRKLGIKSNKQLASHLALES 524 Query: 443 AVSQDEE 449 + DEE Sbjct: 525 SDEADEE 531 >UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UB0_SULDN Length = 407 Score = 387 bits (995), Expect = e-106, Method: Composition-based stats. Identities = 152/387 (39%), Positives = 253/387 (65%), Gaps = 1/387 (0%) Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 W A + L NE+ + + SL +T R+ + +K + +++++ +F+ Sbjct: 19 WLAVIKNLKNELSFEKEKSASLLNQNAVLTERINGINEKNQEKFILLEQNKEQMRLEFKE 78 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 LA I E+++++ QN+++L+ +++P+REQ + F++Q+ D + KEA++R L EI+++ Sbjct: 79 LAQSILENNSQKFSLQNQENLSKMITPMREQFNEFKKQIDDVYIKEAKDRSMLQAEIKSI 138 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND-AR 236 +++N QM+++A NLT+ALKG++K QG WGE+VL VLE SGLR G EYE +V++E++ + Sbjct: 139 KEINHQMSKDAQNLTKALKGESKKQGVWGEMVLESVLEHSGLRVGVEYEREVTLEHEHNQ 198 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 SR +PDVIV LP G+D+++DAK +LVAYE+Y + EDD +E L EHI S++ HI+ L Sbjct: 199 SRYRPDVIVHLPDGRDIIVDAKTSLVAYEQYSSVEDDEHKERFLNEHIISIKKHIKELSE 258 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 KDY L G++TLD+V MF+P+E A L+A++ L A K +++LV PTTL+V+LR + Sbjct: 259 KDYANLKGIKTLDFVFMFVPIESALLMAMEHDKTLFDHAFKKSVILVGPTTLMVSLRAVE 318 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 N WRYE Q +NAQ+IA RA L+DK F++ + +G+ + Q Y + KL +G G+ Sbjct: 319 NSWRYEKQQKNAQEIAKRAGMLFDKFSGFVESIEKLGKQITTVQKTYDETFSKLHTGSGS 378 Query: 417 VLAQAEAFRGLGVEIKREINPDLAEQA 443 + +Q + LG + + + L + + Sbjct: 379 ITSQFQKLESLGAQSSKVLPKSLTDAS 405 >UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F138_9PROT Length = 483 Score = 387 bits (993), Expect = e-106, Method: Composition-based stats. Identities = 153/410 (37%), Positives = 248/410 (60%), Gaps = 4/410 (0%) Query: 46 SAAKQQITQSEHWRAECE----LLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI 101 ++ +++ SE RA E + L N+ EA + E+ + ++ A +K+ Sbjct: 69 ASISERLENSEALRAALESRLAEKEAALGELAERNSRQEAHIAELNIAITKDREAAAEKL 128 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + ++ +L +F+ LAN+IFE + EQNR S++ +L P+REQ+ FR++V + Sbjct: 129 ALLEEAKTKLGHEFKLLANQIFEERGKTFSEQNRSSIDEVLKPMREQMGEFRKRVDEVHL 188 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 +A++R +L + L++LN QM+++AI LT ALKG +K QGNWGE++L R+LE SGLRE Sbjct: 189 NDAKDRASLREHLNQLEKLNRQMSEDAIGLTHALKGQSKAQGNWGEMILERILETSGLRE 248 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQ 281 G E+ + S + R++PDV+V +P K V+ID+K++L YER +AEDD R+ AL Sbjct: 249 GKEFAREQSFTGEDGRRLRPDVVVYMPGDKQVIIDSKVSLTDYERAVSAEDDDKRKLALT 308 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 H+ S+++HI+ L K+Y LP + T DYVLMF+P+E A+L+A++ P + A + + Sbjct: 309 AHVRSLKSHIQGLSSKNYNHLPNVHTPDYVLMFVPIEGAYLMAIEADPGVFEAAFEQRVA 368 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 +V+P+TL L+ I LWRYE QS N ++ DRA KL+DKM FI+ IG L++A+ Sbjct: 369 VVTPSTLYATLKLIEQLWRYERQSENVVKLVDRAGKLHDKMVSFIESFEEIGARLEQARS 428 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 Y ++ ++ +G GNV+ Q L + ++E+ L E A D+ Sbjct: 429 AYDTSLNRIRTGPGNVINQIATLGKLAGKTRKELPKHLTESAALSDQSGD 478 >UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobacteriales RepID=A3UAT4_9FLAO Length = 470 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 152/453 (33%), Positives = 271/453 (59%), Gaps = 16/453 (3%) Query: 1 MDFSIMVYAVIALV----GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSE 56 MD + V+ ++ L+ G +G LFA ++ + + + +L ++ + ++E Sbjct: 30 MDQNFFVFLLVGLISALSGAYLGNLFARLKNKSETSALQERINQTEHQLERVEESLGRTE 89 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 E ++++S L A ++ + +A ++ ++ +M +++ +++FE Sbjct: 90 V----------EKQTIRSEKEQLNATMQVMKVEYDALERKTKEQKGEMEQLQEKFTKEFE 139 Query: 117 NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRN 176 NLAN+I + + + EQN+ +++ +L PL+E+++ F ++V+DS ++ L +I+ Sbjct: 140 NLANKILDEKSTKFTEQNKTNIDIILKPLQEKIEKFEKRVEDSNKEQYGRHSELKEQIKG 199 Query: 177 LQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR 236 L +LN QM+++A NLT+ALKGD+K QGNWGE++LTR+LE SGL + EY Q S +N Sbjct: 200 LSELNQQMSKDADNLTKALKGDSKIQGNWGELILTRILEKSGLEKDREYTVQDSHDNPEG 259 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 R+Q DV++ LP GK ++ID+K++L +ER+ ++ED+ + L+ HIAS++ H+ L Sbjct: 260 RRLQTDVLIHLPDGKKMIIDSKVSLTDFERFVSSEDEDDKRRHLKSHIASIKRHVEQLSA 319 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K+YQ L + D + MFIP+EPAF +A +P L A +++V+P+TLL ALR + Sbjct: 320 KNYQYLID-ESPDTIFMFIPIEPAFAIASANEPNLYEIAFDKQVIIVTPSTLLAALRLVD 378 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 NLW+ + Q +NA +IA +A LYD D++ +G+ + Q++Y AMKKL +GRGN Sbjct: 379 NLWQNDRQKQNAIEIATQAGALYDSFTNLTDELIKVGKQIGTVQNSYEGAMKKL-TGRGN 437 Query: 417 VLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 ++ + E + LG + + I+ L +A DE+ Sbjct: 438 LIKRVEKLKKLGAKASKAIDAKLLSRAEDSDED 470 >UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ77_CELJU Length = 493 Score = 383 bits (984), Expect = e-105, Method: Composition-based stats. Identities = 163/419 (38%), Positives = 266/419 (63%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + +L +++ A L +++ Q + + LE + +R E +++ ++ Sbjct: 75 LQNKLMQLTEELAGQREKAARLPALEADLQGKQQLLSELEQTHAALVSRTEQERRNFAEQ 134 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 + + ++ L+ +FENLA +IFE ++ ++ L++ L PLR QL FR++V+D + Sbjct: 135 LALLQSARTDLTREFENLAGKIFEAKQQQFQHNSKSLLDTTLDPLRSQLTEFRKKVEDVY 194 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 KE+ ER+ L ++ LQ+ ++ ++AI+L +ALKG++KTQGNWGEVVL R+LE SGL+ Sbjct: 195 EKESAERNRLAGQVLELQKQAQKIGEDAISLAQALKGNSKTQGNWGEVVLERLLEESGLQ 254 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 +G EY+ QV+ SR PDVIV LP+ KD+VIDAK +L YE+Y + ED+ +R+ L Sbjct: 255 KGREYDAQVNFTATDGSRRMPDVIVHLPEQKDIVIDAKCSLSDYEKYCSTEDESSRKQYL 314 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 HI S+RNHI+ L KDY+++ G+++LD+V +FIP+E AF+LAL P L EA +I Sbjct: 315 AAHIQSLRNHIKQLSIKDYEKIDGIKSLDFVFIFIPIEAAFMLALQEDPGLYREAYDRHI 374 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 +LVSPTTLL LRT+ N+WRYE Q++NA++IA A L+D+ L +D + ++G L K Q Sbjct: 375 ILVSPTTLLATLRTVENIWRYEKQNKNAERIAREAGALHDQFVLMLDALDSVGNQLHKTQ 434 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 + Y +A ++L+SGRGN++ + + R LG + K+ I+ + E+A + + L + Sbjct: 435 EAYAKARERLASGRGNLIKRVDDIRRLGAKTKKVISGTVLEEAGVESVDLLLDDTSDTE 493 >UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaproteobacteria RepID=C4I883_BURPS Length = 654 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 185/433 (42%), Positives = 281/433 (64%), Gaps = 4/433 (0%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 Q + + + ++ AEL A KQ R E + + +S T L +L E Sbjct: 200 QLTELRESSGRQNGKLSAELEAEKQAAAL---VRGELVDAKSARAAAESEVTRLTDELTE 256 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + TR EA +Q+A++K+ ++ +++ LS QF+ LA I E ++R EQN+ SL LL PL Sbjct: 257 IRTRTEAERQNAEEKLNLLLQAKEALSNQFKTLATEILEEKSKRFAEQNQTSLGLLLEPL 316 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 + +L F+ +V++ + +E ++R L+ ++R L +LN ++Q+A NLT ALKG KTQGNW Sbjct: 317 KTRLTEFQGKVEEVYVQEGKDRSALSAQVRQLVELNQALSQDAKNLTLALKGSTKTQGNW 376 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE++L RVLEASGLR+G EY Q + + SR QPDV++ LP+ + +V+D+K++L+AYE Sbjct: 377 GELILERVLEASGLRKGDEYHVQDNRVREDGSRAQPDVVINLPEERKLVVDSKVSLLAYE 436 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 RY +AE D R AL++HI S+RNHI+ L K YQ L G ++LD+VL F+P+EPAF+LA+ Sbjct: 437 RYASAETDEERLIALRQHIDSIRNHIKSLSDKQYQALYG-KSLDFVLAFVPIEPAFMLAV 495 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 EL +A + N++LVSP+TLL +RT+A+LWR E QSRNAQ IA R ++LYDK+ F Sbjct: 496 TNDNELFMDAWRRNVLLVSPSTLLFVVRTVAHLWRQEAQSRNAQDIARRGAELYDKLCGF 555 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 ++D+ +G L +A+ Y A KL+ GRGNV+ QAE R +GV+ + + LA+ A S Sbjct: 556 VEDLQLVGNRLGQARKAYDSAHSKLAIGRGNVIRQAEMLRDMGVKPSKALPRSLADIASS 615 Query: 446 QDEEYRLRSVPEQ 458 +D+ + S + Sbjct: 616 EDDAILIPSASVE 628 >UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X215_FLAB3 Length = 501 Score = 382 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 154/450 (34%), Positives = 263/450 (58%), Gaps = 11/450 (2%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNN-EVRSLQSINTS 78 +L Q QQ+ E L + +A LSA + + E + ++ ++S Sbjct: 62 FLKTEKQINQQQTELLNTLKNEMATLSAEHATLQNQFREQRELNAKQSLQIDGIRSEKEE 121 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 + E+ E+ QQ ++ ++ ++ +F+NLAN I E +++ + N+++L Sbjct: 122 IFGRNAELAAINESLQQSLKNQKEEIEKIQETAKNEFKNLANEILEEKSKKFTDANKENL 181 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + LL PL E L+ F+++V + + EA+ER +L + I+ + + +++QEA NL ALKG Sbjct: 182 DILLKPLGENLETFKKRVNEVYDNEARERFSLNNTIKLMMEQTTKVSQEANNLATALKGQ 241 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 KTQGNWGE++L R+LE SGL + EY +Q +I+ + +PD +++LP + V+ID+K Sbjct: 242 TKTQGNWGEMILERILEDSGLCKDREYFSQYNIKTETGENQRPDFVLKLPGNQIVIIDSK 301 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 ++L AYER +AE + R+ L HIA+++ HI L K Y L LD+ +MFIPVE Sbjct: 302 VSLNAYERMCSAETEDERKQNLSLHIAAIKKHIDTLALKRYDNLK--EALDFTIMFIPVE 359 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 PAFL A+ +L A +I+L+SPT L+ L+ I+++W+ Q++NA++IA +A+ L Sbjct: 360 PAFLTAVQYDQQLWNYAYHKHIILLSPTNLIAYLKLISDVWKRADQNQNAEEIARQAAAL 419 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 YDK F+ D+ +G+ ++ A+ +Y AMKKLS+G GN++ E R LGV+ K+++ Sbjct: 420 YDKFEGFVSDLLNVGKKMEGAKQDYESAMKKLSTGNGNLVKATEKLRQLGVKPKKQLPNQ 479 Query: 439 LAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 L E+A ++ ++ NDE+ +D Sbjct: 480 LLERANVEEIDF--------ANDESVTEND 501 >UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B0TZE2_FRAP2 Length = 472 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 163/411 (39%), Positives = 257/411 (62%), Gaps = 2/411 (0%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD 98 +E L + + + + E + + S + + + + T+++ Sbjct: 63 QEKQKNLELKQDNTLRIDELKQELKEEREKSYSYIEEIKNYRSQVSMLETQLKEQNVAMK 122 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQD 158 DK+ + NSE +L +FENLAN+IFE +++++ E+N++SLNS+L+P+REQL F+++V+D Sbjct: 123 DKLELLQNSEAKLKTEFENLANKIFEDNSKKLSERNQESLNSVLNPVREQLKDFKQKVED 182 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 + KE+ R L +E++ L++LN +M EA NLT AL+ K QG WGE+VL VLE SG Sbjct: 183 VYDKESTARGALQNELKTLKELNQKMTAEAHNLTNALRSSTKQQGIWGEMVLENVLEKSG 242 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRES 278 LREG+EY + +D +PDV+V+LP +D++IDAK +L AY Y A D+ +++ Sbjct: 243 LREGFEYFREKHTTDDEGKAYRPDVVVKLPDSRDIIIDAKTSLFAYNDYMAA-DEEQKQT 301 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN 338 L+ HI S+R+HI+ L K+Y+ L G+ +LD++ MFIP+E A LLALD L EA K Sbjct: 302 HLKAHIKSIRDHIKGLANKNYENLKGINSLDFIFMFIPIEGALLLALDNDTNLYDEAFKQ 361 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 I+LVSPTTLLVALR + N WRYE Q+++ I RA +LY K F++D+ +G+S+ Sbjct: 362 KIILVSPTTLLVALRAVENTWRYEKQAQSITDIYSRAEELYKKFVGFVEDLEKVGKSIAD 421 Query: 399 AQDNYRQAMKKLSSGRGNVLAQAEAFRGLG-VEIKREINPDLAEQAVSQDE 448 A +Y A KL +GRGN++ Q E + + ++ K+E+ +L E A+ +E Sbjct: 422 ANKSYENAFSKLKTGRGNLIGQVEKLKVISNIKPKKELESNLVENAMGDNE 472 >UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7P6_ACIC5 Length = 505 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 171/505 (33%), Positives = 288/505 (57%), Gaps = 36/505 (7%) Query: 1 MDFSIMVYAVIAL-VGVAIGWLFASYQHA-------------------------QQKAEQ 34 M +V+ V AL G+A+G F S A QQ AE Sbjct: 1 MPLVAIVFVVAALGAGIAVGAWFGSRLAASERRAEKAQSEAALQAAQAQLDPARQQAAEL 60 Query: 35 LAEREEMVAELSAAKQQITQSE-------HWRAECELLNNEVRSLQSINTSLEADLREVT 87 EE+ A+++ A+ + ++E RA + + L+ ++ +A++ + Sbjct: 61 ALLTEELRAQVAEARDKAARAETEAARLPDLRAALDASEEDKARLRQELSAAQAEMARLG 120 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 T++ + +A +K++ ++ + + L+ QF+ LA I E ++ EQN+ +L LL+P+RE Sbjct: 121 TQLRNERDNAQEKLQMLMGAREELTNQFKTLAQSILEEKSKVFTEQNQANLGQLLTPIRE 180 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 + F+++V + + + L +I+ L LN Q+++EA +L ALKG +KTQG+WGE Sbjct: 181 KFTEFQQKVTELRDQGIKSSAELGQQIKGLSDLNQQLSKEANSLVEALKGSSKTQGDWGE 240 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 +L ++LE++GL++ +Y Q S + +R QPDVIV LP+GK +++D+K++L Y Y Sbjct: 241 FILEQILESAGLQKDRQYRVQESFTREDGTRAQPDVIVSLPEGKHLIVDSKVSLRDYSDY 300 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 AE+D E++L H+A++ HI+ L R++Y L GLR++D+V+MF+P+EPA++LAL Sbjct: 301 CAAEEDAAHEASLARHLAAIHAHIKELSRRNYHTLYGLRSIDFVVMFVPIEPAYMLALAH 360 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 L +A + N++LV P+TLL +RT+A LWR E Q+RN Q+I R +LYDK+ F Sbjct: 361 DSSLWQKAWEQNVLLVGPSTLLFVVRTVAQLWRQEDQTRNVQEIVRRGGELYDKLSAFAK 420 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 D++ +G++LD A+ +Y +A KKL+ GRGN + QAE R LGV+ +++ +L E A + Sbjct: 421 DLTDVGKNLDAARASYDEAYKKLAQGRGNAIRQAELLRQLGVKATKKLPGELVEMARGEH 480 Query: 448 EEYRLRSVP---EQPNDEAYQRDDE 469 + DE D E Sbjct: 481 GAAEMEGGQLSLAAAADEESSEDGE 505 >UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4X023_9GAMM Length = 443 Score = 381 bits (978), Expect = e-104, Method: Composition-based stats. Identities = 179/436 (41%), Positives = 268/436 (61%), Gaps = 7/436 (1%) Query: 7 VYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLN 66 + A+ AL G A+ L A ++ A ++AE A + + Q + + E Sbjct: 1 MVALAALCGGAVAALLAVLI---ERRRAAAREAALMAEKQALSEPLAQVPLLKQQLEGQQ 57 Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHS 126 R + L A+ + R+ Q +K+ S +L ++FENL+ ++ + Sbjct: 58 QRQRDTDAQLQQLGAEKARLEERLAGQQ----EKLAFSEQSRNQLKQEFENLSGKVLDQR 113 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 +++ EQ++Q L+ +L P REQL FRR+V E + + +L ++ +L+ LN QM + Sbjct: 114 GKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQASLIEQLGHLKSLNQQMHE 173 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 +A NLT ALKG KTQGNWGE++L RVLE+SGL G EYETQV++++++ R PD IV Sbjct: 174 DARNLTDALKGQAKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVH 233 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 LP+ KDVVIDAK++LVAYER +A RE AL++H+ S+R+HI+ L KDY L G+R Sbjct: 234 LPENKDVVIDAKVSLVAYERLSSASTSEEREQALRDHLTSLRSHIKGLDTKDYSGLEGIR 293 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 +LD+VL+FIP+E AF++A+++ L T+A NI+LVSPTTLLV LRTI N+WRYE+Q+R Sbjct: 294 SLDFVLLFIPIEGAFMVAMEQDSSLYTDAFARNIVLVSPTTLLVTLRTIQNIWRYEYQNR 353 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 NA IADRA K+ D++ L + M +G + KAQ + K+LS GRGN+ QA+ + Sbjct: 354 NALDIADRAGKICDQVSLIGESMDDLGDKIGKAQLAWDTTFKRLSRGRGNLYRQAQQLKD 413 Query: 427 LGVEIKREINPDLAEQ 442 LG + +R + E Sbjct: 414 LGAKARRALPEPGDEH 429 >UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6VZC3_MARMS Length = 437 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 168/450 (37%), Positives = 258/450 (57%), Gaps = 26/450 (5%) Query: 2 DFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE 61 F I + + G + + +QH Q+K + + EE+ L +K QI + E Sbjct: 14 GFCIGAILLSGIAGAIVQAMRRQWQHTQEKMQL--QNEELKRLLEQSKDQI---HYLEKE 68 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 L + + QS+ EA RE + E +F+ +A+ Sbjct: 69 SLTLEQQFAAAQSVWQEKEAFYREQKKQNET---------------------EFKQMAHE 107 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 I ++ ++N + L SLL+PL Q+ F+ V+ S+ +EA+ER +L EI+ LQ LN Sbjct: 108 IMSQQGLQLAKENERQLGSLLTPLGSQIQKFQESVEKSYQEEARERFSLVKEIKGLQLLN 167 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 +++ +A++LT ALKG NK QG WGEV+L R+LE SGL +G EYETQ S + R+QP Sbjct: 168 QKISDDAVSLTHALKGQNKLQGGWGEVILERILERSGLEKGREYETQASYQTAEGRRLQP 227 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 DV++ LP+GK +++D+KM L++Y Y AE D R AL++H+ +VR H++ L K Y Sbjct: 228 DVVIHLPEGKQIIVDSKMVLISYLAYMEAETDEDRNRALKQHLDAVRRHMKELSAKSYHD 287 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 LPG+ +LD+VL+FIP+E AF LAL L +EA ++NI++V P+ LL LRTI N+WR Sbjct: 288 LPGVTSLDFVLLFIPIEAAFGLALQGDNGLFSEAFEHNIIIVGPSNLLATLRTIQNIWRN 347 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E QS+NA +IA +A +YDK F+ DM IG L+ + A+KKL++GRGN++A+A Sbjct: 348 EKQSQNAIEIARQAGAMYDKFSGFVQDMDDIGSKLEAVSRTHDSALKKLTAGRGNLVARA 407 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 E + +G + + + + V DE Sbjct: 408 EKLKLMGAKTSKALPVEYLSDDVFTDEPNE 437 >UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurellaceae RepID=C9R7J4_AGGAD Length = 584 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 139/410 (33%), Positives = 240/410 (58%), Gaps = 1/410 (0%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 H+ + A +E + A+ +Q E ++ + +L +T+L +L E+ Sbjct: 153 HSAIAEQITALKERFGVASAQAEGLRSQLEQSQSLISRREEALANLTEKHTALSQELAEL 212 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 T + ++H ++ + ++Q+L+ +F+NLANRI E ++R + N+ S++SLL P R Sbjct: 213 KTTLTEKEKHFAEQQQNFEQTKQQLNTEFQNLANRILEEKSQRFQQTNQASMDSLLKPFR 272 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 EQ++ F+++V + + + L EI+ + ++ M+Q+A NLT ALKG+ KT GNWG Sbjct: 273 EQIESFQKRVNEIHSESVKGNAGLEAEIKKVLEIGLSMSQQANNLTSALKGEKKTLGNWG 332 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E+ L R L+++GL E Y Q +N+ R PD I+ LP K ++ID+KM+L AYE Sbjct: 333 EMQLERALQSAGLLEDQHYTAQAHFKNEEGKRNYPDFILNLPDDKHLIIDSKMSLNAYES 392 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 ++ED+ R++ L EHI ++RNHI L RKDY L G+R+ ++VLMF+ VEPA++ AL Sbjct: 393 AVSSEDEMERQAFLHEHIKALRNHIDDLSRKDYSNLIGVRSPNFVLMFVAVEPAYIEALK 452 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P L N+++VS TTL+ LRT+ANLWR E + A++I+++A +Y+++ L Sbjct: 453 MDPSLFGYGYDKNVIMVSHTTLMPILRTVANLWRVERGNAEAREISEKAGDIYNQICLLA 512 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 + ++ +G SL +Y + L +G ++ + E F+ L + + + Sbjct: 513 ERLAKVGNSLSAVSSHYNSTVTALVGQQG-LMGKVERFKALSAKASKTLP 561 >UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK3_MARMM Length = 527 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 162/462 (35%), Positives = 267/462 (57%), Gaps = 24/462 (5%) Query: 5 IMVYAVIALVGVAIGWLFASY--------------QHAQQKAEQLAEREEMVAELSAAKQ 50 +++ ++ L+ V G LF + ++ + +E +EL+ A++ Sbjct: 46 LILAGMVVLLAVLAGGLFLQRKPDPSGTTDNPEVERLRSERDDWRNRQESAASELATARE 105 Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 + + + E + L + ++ L A + T +AA +H D+K+ ++ + +R Sbjct: 106 ALARLDGVVEERDRLRVSLEAVTVERNGLNASHEALKTEHDAALRHHDEKLAELEKARER 165 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L++QF+ A I + S +++Q+ +SL +LL PLREQL FR +V+ K+A++RH Sbjct: 166 LNDQFKLTAAEILKASGAELNKQSTESLQTLLKPLREQLTDFRSKVE----KDAEQRHGH 221 Query: 171 THEIRNLQQL----NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 EI+ L + ++M+ +A L AL+ +K QG+WGE+VL +LE +GL E + Sbjct: 222 AGEIKQLMETVRKDASRMSDDAQKLANALRSSSKVQGDWGEMVLASILERAGLLENEHFH 281 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 TQ + N + ++PDVIV +P G +VID+K++LVA+ER NAEDD R +AL++HIAS Sbjct: 282 TQSTERNAEGALLRPDVIVDMPGGHRLVIDSKVSLVAFERCVNAEDDEIRTAALKQHIAS 341 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VR HI+ LG KDY +L +++ LMFIP+E A LAL PEL A N+M+ +PT Sbjct: 342 VRAHIKALGEKDYAKLYEG--VNFTLMFIPLEGAASLALQNDPELSAYAWDRNVMIATPT 399 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL++A+RT+ NLW + Q+R+A IADRA LYDK F+ D+ +G+ +D A+D + A Sbjct: 400 TLMMAMRTVGNLWTIDRQNRHAIDIADRAGALYDKFEGFVGDLETVGKRIDGAKDAWAAA 459 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 KL GRGN++ Q E + LG ++ + + + A + + Sbjct: 460 KGKLVEGRGNLVRQTEMLKSLGANARKSLPAEYLDAAGADEA 501 >UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=Neisseria RepID=RMUC_NEIMA Length = 594 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 183/444 (41%), Positives = 268/444 (60%), Gaps = 7/444 (1%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + Q + + ++ +AA++QI + AE E L LQ L + Sbjct: 153 ESRQTVRDVQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENER 212 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + T++E + +++K+ + + + LS+QF+NLAN I E +RR EQNR+ L+ +L+PL Sbjct: 213 LATQIEQERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPL 272 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG-DNKTQGN 204 E++ GF V+ ++ KE++ER TL +E++ LQ LNAQ+ EA LT AL G NK QGN Sbjct: 273 NERIQGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGN 332 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSI----ENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 WGE++L VLE SGL++G EY Q + E+ R+QPDV+V LP K +VID+K++ Sbjct: 333 WGEMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS 392 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY RY A D T L H+AS+R H++ L KDY L G+ TLD+V MFIPVEPA Sbjct: 393 LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVEPA 452 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 +LLAL L E IMLV P+TLL LRT+AN+WR E Q++NA IAD KLYD Sbjct: 453 YLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGGKLYD 512 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 K F+ + ++G+ +D+AQ++++ A K+L+ GRGN++ +AE R LGV+ +++ DL Sbjct: 513 KFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQLARDLT 572 Query: 441 EQAVSQDEEYRLRSVPEQPNDEAY 464 E+A S+ DEA Sbjct: 573 ERANETTALSE--SLEYVAEDEAV 594 Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 24/207 (11%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 + + L Y+H Q E + SAA++QI + AE L LQ Sbjct: 56 IASELAVLDGKYRHLQD------ENYALGNRFSAAEKQIAHLQEKEAESVRLKQSYIELQ 109 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI----------- 122 L + + T++ ++ D+ QR+ E + Sbjct: 110 EKAQGLAVENERLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRDVQNDLADVG 169 Query: 123 -----FEHSNRRVDEQNRQS--LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 E + E+ ++ L + L+E+ G + + + QER ++ Sbjct: 170 NRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENERLATQIEQERLASEEKLS 229 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQ 202 L + ++ + NL + + + Sbjct: 230 LLGEARKSLSDQFQNLANTILEEKSRR 256 >UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacteria RepID=Q7NV71_CHRVO Length = 493 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 175/442 (39%), Positives = 269/442 (60%), Gaps = 8/442 (1%) Query: 18 IGWLFASYQHAQQKAEQLAEREEM----VAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 +G A Q + +QL ERE+ E Q+ E E L Sbjct: 47 LGAYIARAQRVPELEKQLQEREQALDASQREARGLASQLAAREEQGRVLEALEARSLQQG 106 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 L A +E+ T+++ ++ + +K+ ++ + Q LS+QF+ LA+ I E ++R EQ Sbjct: 107 QDIMRLTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKSKRFTEQ 166 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 N+ +L +LL+PL E++ F + VQD++ K+++ER TL E++ LQ+LN ++ +A+ LT Sbjct: 167 NQNNLGALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTN 226 Query: 194 ALKG-DNKTQGNWGEVVLTRVLEASGLREGYEYETQVS---IENDARSRMQPDVIVRLPQ 249 AL G +K QG WGE+VL +VLE SGL + EY QVS +D R QPDV++ LP+ Sbjct: 227 ALTGASSKAQGTWGEMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPE 286 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 GK +V+D+K++L AY RY A+ + RE+ L+ HIA++R HIR L K YQ L L TLD Sbjct: 287 GKQLVVDSKVSLNAYVRYTAADGEEAREAELKGHIAAIRAHIRTLSDKRYQDLYKLNTLD 346 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V MFIPVEPA+LLA+ L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ Sbjct: 347 FVFMFIPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQ 406 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +IA + +YDK F+ +M +G+ LD ++D + AMK+LSSGRGN++ AE R LG+ Sbjct: 407 EIARQGGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGI 466 Query: 430 EIKREINPDLAEQAVSQDEEYR 451 +++ L ++ ++ Sbjct: 467 RNNKQLPSQLRLESDEGEDADE 488 >UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepID=C5TKH2_NEIFL Length = 600 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 182/435 (41%), Positives = 267/435 (61%), Gaps = 11/435 (2%) Query: 37 EREEMVAELSAAKQQITQS----EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 + E + +L+ K I + AE L E +L N +L+ + T+ E Sbjct: 167 QNERLSTQLTQEKANIDDKNSLLQQQEAEKGRLKQEYAALLEQNHALQVQNERLNTQSEK 226 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 +Q A++K+ + ++ + LS+QF+NLAN I E +RR EQN L LL+PL E++ GF Sbjct: 227 DRQAAEEKLSLLADARKNLSDQFQNLANTILEEKSRRFTEQNHDHLQQLLNPLNERIHGF 286 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG-DNKTQGNWGEVVLT 211 VQ ++ KEA+ER T+ +E++ LQ LN Q+ +A LT AL G NKTQGNWGE++L Sbjct: 287 SELVQQTYEKEAKERLTIENELKRLQTLNTQLHHDAKALTTALTGTQNKTQGNWGEMILE 346 Query: 212 RVLEASGLREGYEYETQVSI----ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 VLE SGL++G EY Q S + + R+QPDV++ LP K +VID+K++L AY RY Sbjct: 347 SVLENSGLQKGREYIVQASSVRHEADGTQRRLQPDVLINLPDNKQIVIDSKVSLTAYVRY 406 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 + E L H+AS+R HI+ L KDY L G++TLD+V MF+PVEPA+LLAL Sbjct: 407 TQS-TGAEAERELANHVASIRAHIKSLAAKDYTDLEGVKTLDFVFMFVPVEPAYLLALQH 465 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 P L E IML P+TLL LRT+AN+WR E Q++NA IA+ SKLYDK F++ Sbjct: 466 DPNLFQECFDKRIMLTGPSTLLATLRTVANIWRNEQQNQNALAIAEAGSKLYDKFVGFVE 525 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 M I ++L +AQ ++ A +L SGRGN+++ E R LG++ +++ DL E+A+S++ Sbjct: 526 SMDGINKALGQAQSQFQTAYGRLVSGRGNLISSTEKLRKLGIKAGKQLQRDLLEKAMSEN 585 Query: 448 EEY-RLRSVPEQPND 461 E++ L + +Q ND Sbjct: 586 EDHAALPTAQDQEND 600 Score = 42.7 bits (99), Expect = 0.034, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 79/260 (30%), Gaps = 64/260 (24%) Query: 7 VYAVIALVGVAIGWLFA--------------------------------SYQHAQQKAEQ 34 + + IG LFA Q A A+ Sbjct: 4 ILILTGAAAFFIGALFAWLITRYQAQSRHFIVLQELAESRRLHEFAEQVQAQTAADLAQS 63 Query: 35 LAEREEMVAEL-------SAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVT 87 +E+ EL +AA++QI + AE E L +E Q +L+ + + Sbjct: 64 RHTVQELQDELQETGNRFAAAEKQIAYLQDCEAEAEALKHECAKWQQSAQNLQINNERLN 123 Query: 88 TRMEAAQQHADDKIRQMINSEQR-----------------LSEQFENLANRIFEHSNR-- 128 T++ Q + DK + E L Q E L+ ++ + Sbjct: 124 TQLVQEQALSADKNTLLQQQETEKGRLKQDYDTLLEQNHALQVQNERLSTQLTQEKANID 183 Query: 129 ------RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 + E + L + L EQ + Q + + ++R ++ L Sbjct: 184 DKNSLLQQQEAEKGRLKQEYAALLEQNHALQVQNERLNTQSEKDRQAAEEKLSLLADARK 243 Query: 183 QMAQEAINLTRALKGDNKTQ 202 ++ + NL + + + Sbjct: 244 NLSDQFQNLANTILEEKSRR 263 >UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria RepID=B7S2L4_9GAMM Length = 486 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 157/477 (32%), Positives = 255/477 (53%), Gaps = 26/477 (5%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQL-----AEREEMVAELSAAKQQITQSEHW 58 +++ IA G+A+G L + Q AE+L A EE+ EL++A + I+ E Sbjct: 8 QLIIAGSIAFGGIALGLLIGVIR-GQGIAERLRLQMTASNEELQLELASATRVISGLEVE 66 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD--------------DKIRQM 104 R + L ++ ++ + LE DL R +A Q ++ + Sbjct: 67 RNQ---LQERLQEGRTALSKLENDLDSHGRRYQALQNEHTRLHTQQEEREEQHQSQMTLL 123 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 + L ++FE LANRIFE + N++SL SLL P REQ+ GF+ ++ + + Sbjct: 124 KEARDNLKQEFELLANRIFEDKGKSFTSTNKESLESLLKPFREQISGFQSRINEVHTEAV 183 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + L EI+ + ++ +M +A NL ALKGD KT GNWGE L R LE +GL G Sbjct: 184 KGNTALEAEIKKVFEIGLEMNSQATNLATALKGDKKTTGNWGEAQLERTLELAGLLPGDH 243 Query: 225 YETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHI 284 YE Q S + R PD I++LP+ K +VID+K++LV Y+R +A + + AL+ H Sbjct: 244 YEAQASFTDAQGKRRLPDFIIKLPEKKCLVIDSKVSLVDYDRAISAATEEEQSEALRSHA 303 Query: 285 ASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 +VRNHI L KDY L G+ + D+VLMF+P+EPA++ A+ +L + +++VS Sbjct: 304 QAVRNHIDDLSSKDYSNLSGVDSPDFVLMFMPIEPAYIEAMKYNKDLFNYGYQRQVVMVS 363 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 TTL+ LRT+ANLW + +R A++I+ RA ++Y+++ L + + +G +L A ++Y Sbjct: 364 HTTLMPILRTVANLWMIDQSNREAREISTRAGEIYNQVCLVAERLHKLGNTLKSANNHYN 423 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPND 461 Q +K L+ +G ++ + E FR L + + E + E RL +V +D Sbjct: 424 QTVKGLAGQQG-LVGKVERFRQLSSNASKSLTE--LEPIHADIELERLEAVELTQDD 477 >UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ES75_ARCB4 Length = 399 Score = 377 bits (968), Expect = e-103, Method: Composition-based stats. Identities = 160/367 (43%), Positives = 243/367 (66%), Gaps = 4/367 (1%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 + Q+I S + + + +++ +KI + N++Q++ +FENLAN++F+ ++ Sbjct: 29 QKYQNIINSYLLKISTLEELSKVEKENLKEKINFLENNKQQMKLEFENLANKLFDEKEKK 88 Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 + +L +LS +EQLD F ++V D + E ++R +L EI+NL++LN Q++ +AI Sbjct: 89 ----STTNLTFVLSSFKEQLDSFSKRVNDIYNDETKQRSSLLTEIKNLKELNNQISNDAI 144 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 NLT+ALKG NKTQG+WGE++L+ +L+ +GLREG EY Q S + R++PDVIV LP Sbjct: 145 NLTKALKGQNKTQGDWGEMILSSILDQTGLREGKEYTIQGSFTSAEGKRLRPDVIVHLPS 204 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 KD+VID+K++L AY Y AE++ ++ A +E + S+ +HI+ L K Y+ + G+RTLD Sbjct: 205 NKDIVIDSKVSLNAYINYSKAENEDEKQQASKELVKSITSHIKDLSSKSYENIDGVRTLD 264 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +VLMFIP+E AFLLA L A NNIMLVSP+TL V LRTI N+WR EHQ+ NAQ Sbjct: 265 FVLMFIPIEGAFLLATSSDDNLFKLAFDNNIMLVSPSTLYVTLRTIENIWRNEHQNENAQ 324 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 I+ +A+ LYDK F+ D+ IG ++ + Q Y AM KLSSG GN++ + E F LGV Sbjct: 325 LISKKAADLYDKFVAFVGDIEDIGTNITRTQKAYDGAMNKLSSGNGNLIRRTEEFLELGV 384 Query: 430 EIKREIN 436 + K+++ Sbjct: 385 KPKKQLP 391 >UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=Pasteurellaceae RepID=RMUC_PASMU Length = 509 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 150/432 (34%), Positives = 250/432 (57%), Gaps = 2/432 (0%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 +H + A +E + A+ Q EH +A E + L + T+L +L Sbjct: 65 QARHNDIAEKITALKERFGIASAQAESLAKQLEHSQANFTRKEQENQELMAKLTTLSQEL 124 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 E+ T + ++H ++ + + S+Q+LS +F+NLANRI + +R + N+ +L+SLL Sbjct: 125 TELKTTLSEKEKHFAEQQQHIEQSKQQLSTEFQNLANRILDEKSRSFSQSNQTALDSLLK 184 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P REQ++GF+++V + + + L EI+ + ++ M+Q+A NLT ALKG+ KT G Sbjct: 185 PFREQIEGFQKRVNEIHSESVKGNAGLEAEIKKVLEIGLNMSQQADNLTSALKGEKKTLG 244 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGEV L R L+ +GL EG Y Q +++ PD ++ LP K ++ID+KM+LVA Sbjct: 245 NWGEVQLERALQLAGLLEGEHYSAQAHLKDGEGKHNYPDFVLNLPDNKHLIIDSKMSLVA 304 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 YE NAEDD R++ L+EHI +++NHI L RKDY L G+R+ ++VLMFI VEPA++ Sbjct: 305 YESAVNAEDDLKRQNKLREHIKAIKNHIDDLSRKDYSNLIGMRSPNFVLMFIAVEPAYIE 364 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A+ P L + N++LVS TTL+ LRT+ANLWR E + A++I+ RA +Y+++ Sbjct: 365 AMKMDPTLFNYGYEKNVILVSHTTLMPILRTVANLWRIERGNAEAKEISARAGDIYNQIC 424 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN-PDLAEQ 442 + + + +G +L A +Y + L +G ++ + E F+ L + + + +L Sbjct: 425 VIAERLGKLGNTLSSASSHYNSTVTALVGQQG-LVGKVERFKDLSAKANKTMPNVELLHH 483 Query: 443 AVSQDEEYRLRS 454 AV + +++ Sbjct: 484 AVESERLDVIKA 495 >UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF2_9GAMM Length = 450 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 273/420 (65%), Gaps = 6/420 (1%) Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 + + + + L E + L+ + L + ++ + Q H ++I + ++++ LS Sbjct: 37 REQFATQQQLDKLIVEQQQLEEVRRDLLTLNSGLEQKLLSQQNHYQEQIALLADAKKTLS 96 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 +FENLANRIF+ + Q+++++ LSPLR + FR+QV+ ++ KE ER+ L Sbjct: 97 SEFENLANRIFDEKQTKFSLQSKEAMEVTLSPLRRDIGDFRKQVESAYEKENAERNKLVG 156 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 +I LQ+ Q++ +A++L AL+GDNK QGNWGE +L ++LE SGL G EY TQV+++ Sbjct: 157 QISELQKQTMQVSADAVSLATALRGDNKAQGNWGEFILEKLLEDSGLSNGREYSTQVALK 216 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 ++ R PDVIV LP+G+D+VIDAK++LV YERYF+AED+ +++ L++H++S+R HI+ Sbjct: 217 DETGKRRNPDVIVHLPEGRDIVIDAKVSLVDYERYFHAEDEESKKLCLRQHLSSLRAHIK 276 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L KDY++L G+ +LD+VL+F+P+E AF+LALD PE++ +A I+LVSP+TL+V L Sbjct: 277 GLSSKDYEKLEGVNSLDFVLIFVPIESAFMLALDHDPEMMRDAYDRGIILVSPSTLMVTL 336 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 RTI NLWRY Q+ NAQ IAD+A LYD+ L+I+ + +G+ ++K+Q+ + A K+LSS Sbjct: 337 RTIKNLWRYADQNLNAQLIADKAGGLYDQFVLYIESLDEVGKHIEKSQEAWDTAHKRLSS 396 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 GRGN++ + E + LG + K+ + ++ D + L V + EA E + Sbjct: 397 GRGNLIRRTEELKKLGAKAKKSLPDNML------DADPLLPLVANKVVGEADSNKPENKE 450 >UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDJ6_9SPHI Length = 435 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 149/410 (36%), Positives = 255/410 (62%), Gaps = 1/410 (0%) Query: 37 EREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 +++ + EL A+ Q + + ++ + + L +E+ L++ + + + A +Q Sbjct: 26 NQQQPLLELKEAEHQKSLA-WFKEDKQRLEDELNDLRNSFIQERGKVIKAEEMLHAQRQR 84 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 ++ + +QR +FEN+AN++ E + EQNR +++++L PL+E + F +V Sbjct: 85 QAEQELYIAELQQRFKVEFENIANKVLEEKTAKFTEQNRSNMDTILHPLKENIRAFEEKV 144 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 + + E+ ER+ L I L + Q+ +EA NL+RALKGD K QGNWGEV+L RVLE Sbjct: 145 EKVYKAESDERNVLKGVITQLMTQSKQIQEEANNLSRALKGDTKKQGNWGEVILERVLER 204 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR 276 SGL + EY Q S+ +RMQPDVI+ LP K +++DAK++LVAYER+ NA D R Sbjct: 205 SGLVKDREYRIQTSLTASGGTRMQPDVIIDLPDDKHLIVDAKVSLVAYERFVNAATDEER 264 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 E+ +++H+ S++ HI+ L K+YQ+L + + D+VL+FIP+E +F +A+ + EL A Sbjct: 265 ETHVKQHLLSIKTHIQGLSGKNYQELYQINSPDFVLLFIPIESSFGIAVQQDAELFNYAW 324 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 + +++VSP+TLL LRTI++LW+ E Q+RN +IA + +YDK F+ DM +IG+++ Sbjct: 325 ERKVVMVSPSTLLATLRTISSLWKQERQNRNVLEIARLSGSMYDKFVGFLQDMESIGRNI 384 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 ++QD Y +A+ KLS+G GN+ + +E + LG + ++I+ + + Sbjct: 385 RQSQDAYDKALNKLSTGAGNLSSTSEKIKKLGAKATKQIDTRFLDSGIED 434 >UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC5_SULNB Length = 515 Score = 373 bits (958), Expect = e-102, Method: Composition-based stats. Identities = 164/432 (37%), Positives = 269/432 (62%), Gaps = 15/432 (3%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSA----AKQQITQSE-----------HWRAECELLNN 67 QH Q E+LA + E VA L +++++Q+E + E + L Sbjct: 79 QELQHFSQVREELASKTEQVATLQTKNSVLEKELSQTETQLENLEKMYENLLKEHKELQG 138 Query: 68 EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN 127 LQ N + + + ++E +HA K+ M ++ L +FE LA +IF+ ++ Sbjct: 139 RFEHLQEENNRFQVNNARLLMKLETESRHASSKLEMMQEHKKELKTEFERLAKQIFDGNS 198 Query: 128 RRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + E ++Q+L+S++ PL+ Q++ F++QV D++ E+Q+R L +EI +L++LN +++ + Sbjct: 199 EKFAEFSKQNLDSMIKPLQTQIEEFKKQVSDTYNAESQDRAVLKNEINSLKELNEKISTD 258 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 AINLT ALKG++K QG WGE+VL VLEASGLR+G+E+E +VS+ D ++PDVIV L Sbjct: 259 AINLTNALKGESKQQGVWGEMVLEHVLEASGLRKGHEFEREVSLRTDDNEVLRPDVIVHL 318 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P +D++IDAK +L++YER+ NAED+ + L H+ S++ HI L K+Y++L + T Sbjct: 319 PDNRDLIIDAKTSLISYERFINAEDEANKAKHLAAHLNSIKMHIEELSNKNYERLKEVNT 378 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 LD++ MF+P+E A +AL+ + A K I+LV PTTLLVA+R + N+W+YE Q++N Sbjct: 379 LDFIFMFMPIEGALAVALEHDNSIYDNAFKKKILLVGPTTLLVAMRAVENVWKYERQNQN 438 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 AQ+IA RA +YDK F +D+ I + +D Q ++ A KLS G+GN++ Q + + L Sbjct: 439 AQEIARRAGAMYDKFVRFSEDLIKISKQIDAIQSSFSAAKNKLSDGKGNLVRQVQQLKEL 498 Query: 428 GVEIKREINPDL 439 G + ++I +L Sbjct: 499 GAQTNKQIPKEL 510 >UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWK3_9BACT Length = 436 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 146/412 (35%), Positives = 235/412 (57%), Gaps = 3/412 (0%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV-TTRMEAAQQHA 97 A LS + ++ E ++ E + I + + R+EAA+Q Sbjct: 27 RRDNARLSDERAAADEARRLAEESRRVSEEKSAAAEIEIRTLVERSTLAQARLEAAEQRM 86 Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 + + E+ QF+NLAN I +R E NR++L+ LL P R+ + FR +V+ Sbjct: 87 AEARAEREKMEETFRTQFKNLANDILGEQSRTFKETNREALDVLLKPFRDNIVEFRERVE 146 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 + E ++R L +E+ L +LN ++ E NLT ALKG++K QG+WGE++L +L+ S Sbjct: 147 KIYSSENEQRGALRNELERLMELNRRITTETTNLTNALKGNSKVQGDWGEMILETILDNS 206 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRE 277 L G Y+TQ++I+++A + ++PDV++ LP+GK +VID+K++L A+ Y AED+ TR Sbjct: 207 NLIRGVHYDTQLNIKDEAGNNLRPDVVLYLPEGKRIVIDSKVSLTAFVGYVGAEDEATRR 266 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK 337 L H+ASVR H+ LGRK+YQ+L L + D+V+MFIP EPAFL AL + +A Sbjct: 267 QYLASHVASVRQHVVELGRKEYQRL--LDSPDFVIMFIPNEPAFLAALQNDSSIWADAYD 324 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 +++ SPT L L+ + +LW+ Q++N I +KLY+++ F + +GQSLD Sbjct: 325 KKVIISSPTNLFALLKLVDDLWKRNAQNKNTADIVTYGTKLYEQLVAFTASLEGVGQSLD 384 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 A+D Y A K+L +G N++ E R LG+ K++ + + A DEE Sbjct: 385 AARDKYNDAYKRLCTGNDNIVRCGERLRKLGIPTKKQQSARTLQAADLPDEE 436 >UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroidetes RepID=A0M0B0_GRAFK Length = 476 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 144/450 (32%), Positives = 259/450 (57%), Gaps = 13/450 (2%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE---- 61 +++ V VGV IG L + + + + ++ ++ K Q+ + E Sbjct: 9 LIFLVALGVGVYIGKLISGLRSKSETGILEEKNNQLSFQIDELKNQLNSNLEKNKEDIRQ 68 Query: 62 --------CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSE 113 E + NE ++ ++ L + + Q+ +++ ++ +++ ++ Sbjct: 69 LKNEAHTDIEKIENEREEIRREKENISLQLTRKISEFDNLQERNEEQKAEVEKLQEKFTK 128 Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 +FENLAN+I + + + N+Q++ ++L PL++++ F +V S + + L + Sbjct: 129 EFENLANKILDQKSEKFTSLNKQNIENILDPLQKKIKDFEEKVTRSDSESIKRHAELGEK 188 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 ++ L + + +++++A NLT+ALKGD K QGNWGE+VL RVLE SGL++ EY Q S Sbjct: 189 LKFLNEQSLKISEDATNLTKALKGDTKMQGNWGEMVLERVLERSGLQKDSEYFVQQSFNT 248 Query: 234 DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRL 293 + R+ PDVI+ LP K +V+D+K++L AYERY N ++ + + L+ H+ SVRN + Sbjct: 249 EEGKRVMPDVIIHLPGDKKMVVDSKVSLNAYERYINEPEEDQKITHLKNHLISVRNRVNE 308 Query: 294 LGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALR 353 LG K+Y L + + D+VL+FIP+E AF +A + P L ++A + NI++V+PTTLL L+ Sbjct: 309 LGNKNYHSLYQMESPDFVLLFIPIEAAFAIASNEYPSLYSDAFEKNIIIVTPTTLLAVLK 368 Query: 354 TIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 TI ++W+ E Q +NA QIA +A LYD D++ IG+ + Q++Y AMKKL +G Sbjct: 369 TIDSMWQNEKQKQNAIQIATQAGALYDSFTNLTDELLKIGRQIGTVQNSYEGAMKKL-TG 427 Query: 414 RGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 +GN++ + E + LG + ++++ L +A Sbjct: 428 KGNLIRRVEKLKKLGAKASKQLDQKLINRA 457 >UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HY1_THICR Length = 480 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 154/464 (33%), Positives = 277/464 (59%), Gaps = 22/464 (4%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQL--------------AEREEMVAELS--- 46 S + + V+AL+G +I W+ Q E+L E + + +E+S Sbjct: 9 SPLTWLVMALIG-SIVWVVQLKQALSSANEKLPGLAAIEADNQFLKEENDRLKSEISDFQ 67 Query: 47 ----AAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR 102 + Q+ Q E RA + + LQ+ ++ +A+L + +R+E ++ +K+ Sbjct: 68 VMKGESNQRAEQLEQLRALQKEQQVTFQQLQTRHSETQAELASLKSRLETERESNAEKLA 127 Query: 103 QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGK 162 + +++Q L+++F+ L+N I E +++ +Q++++++ L+ P++ L+ F+++++ + Sbjct: 128 LLDSAKQTLTQEFKVLSNEILEQKQQQMGQQSKETISGLVQPIQTSLEQFKQRIEAVHKE 187 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 + + R +LT ++++L++LN M+ EA NLT+ALKGD K QGNWGE +L ++LE++GLREG Sbjct: 188 DLEGRASLTEQLKHLKELNQTMSLEAQNLTKALKGDQKIQGNWGEFILRKLLESTGLREG 247 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 E+ET+ S + R++PDVI+ LP K V+ID+K++LV+YE N+E + + ++ Sbjct: 248 IEFETEKSFNQEGGKRLRPDVIINLPDSKHVIIDSKVSLVSYEAALNSETENEKAQHIKN 307 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H+ S+ HI+ L K Y L L D+VLMFIP+E A+L+A+++ + A + + Sbjct: 308 HLQSISKHIQALSDKRYDHLELLNAPDFVLMFIPIEGAYLMAIEQNSAIFENAFDKKVAV 367 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 V+PTTL L+TI LWRYE QS + ++ RA++++DK FID IG+ L AQ + Sbjct: 368 VTPTTLFTTLKTIEQLWRYERQSEHTVKLIKRAAEVHDKFVGFIDTFEKIGKQLGTAQGS 427 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + QA K++ G GN++ QAE + L + K+EI L ++A + Sbjct: 428 FEQARKQMLQGNGNLVRQAEMLKELAGKTKKEIPQHLLDEAEGE 471 >UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingobacteriaceae RepID=C5PMI0_9SPHI Length = 442 Score = 370 bits (949), Expect = e-101, Method: Composition-based stats. Identities = 152/443 (34%), Positives = 267/443 (60%), Gaps = 6/443 (1%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKA---EQLAEREEMVAELSAAKQQITQSEHWR 59 M+ +IAL+ + + LF + K + +++EM EL+ ++Q+ E+ Sbjct: 1 MEWMLVTIIALLAIVLVVLFLKRKEGSGKEDYEQLRHQKDEMALELARSQQR---EENLI 57 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 E L E+ +S + L ++A Q+ + + +++ ++++ + +F+++A Sbjct: 58 GERADLKEELEKERSERLKSDRALETAHAYLQAQQEKLEGQKKEIEETKKQFNLEFQHIA 117 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 N+I E ++ E N S+ LL PL+E++ F +V+ ++ E+ ER+ L + L Q Sbjct: 118 NQILEEKTKKFTETNHNSITLLLDPLKEKIKTFEEKVEKTYQHESAERNVLKGVVEQLMQ 177 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + Q+ EA NLTRALKGD+K QGNWGEV+L RVLE SGL + E+ Q S+ ++ R+ Sbjct: 178 QSMQIRNEANNLTRALKGDSKKQGNWGEVILERVLERSGLLKDQEFRLQASVTDEDGKRL 237 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 QPD I+ LP K +++DAK++LVAYE++ NAE + ++ ++HI SV NH+R L K+Y Sbjct: 238 QPDAIIDLPDDKHLIVDAKISLVAYEKWVNAESEEEQKIFARQHIQSVENHVRELSAKNY 297 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 +L +++ D+VL+F+P+E A +++ +P+L ++A +++VSP+TLL LRTIA++W Sbjct: 298 HELYRIQSPDFVLLFMPIESALSMSVREKPDLFSDAWDRKVVIVSPSTLLATLRTIASMW 357 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E Q+RN +IA A LYDK F+ DM + L +A + +++A KKL +G GN++ Sbjct: 358 KQERQTRNVLEIAREAGALYDKFVGFLQDMQQVEGQLQRAMERHQEATKKLGTGAGNIIR 417 Query: 420 QAEAFRGLGVEIKREINPDLAEQ 442 + E R LG + ++I+ ++ Sbjct: 418 RVENLRELGAKANKQIDRKYLDE 440 >UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F9EE Length = 423 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 158/376 (42%), Positives = 247/376 (65%) Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 + +N ++ SLQ NT + ++ +++ QQ + +K+ M +EQ+LS++FE LAN+I Sbjct: 48 QTMNAQLTSLQEANTEYKVANGALSASLQSLQQSSKEKMAIMQQAEQQLSDKFERLANQI 107 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 FE ++ N+QS++ ++ PL+ +LD F+ Q+ +E ER L EI +L+ LN Sbjct: 108 FEQKTKQFSHVNQQSMHQVVQPLQAKLDEFKHQISQQSRQEGLERAALKQEIHSLKTLNE 167 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 + +A+ LT ALKGDNK QGNWGEVVL +L GL EG E+ QVSI +D +QPD Sbjct: 168 TINVQALALTEALKGDNKQQGNWGEVVLESILSNCGLTEGQEFIRQVSIRDDQGRLLQPD 227 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 ++V LP K V+ID+K++L AYER F A DD TR S + H+ S+R H++ L +KDY + Sbjct: 228 IVVNLPNNKAVIIDSKVSLTAYERMFKATDDSTRASYCKAHLQSIRQHVKGLSQKDYSRA 287 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 G+ +LDYVL+F+ E AF AL+ P LI +AL+ NIMLVSP+ L++AL+TI N+W+ E Sbjct: 288 YGIESLDYVLLFLASEAAFQTALNEDPNLINDALQQNIMLVSPSNLMIALKTINNIWQTE 347 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + +Q+IA++A+KL+DK+ F+ +M IG+ ++ Q+ Y AMKKLS+GRG++++ Sbjct: 348 KRINMSQEIAEQATKLHDKLAGFVQEMEKIGKQINMTQNTYENAMKKLSTGRGSIVSMGN 407 Query: 423 AFRGLGVEIKREINPD 438 +GV+ + + + Sbjct: 408 KLEAMGVKTFKHLPKE 423 >UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETS9_AMOA5 Length = 427 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 150/403 (37%), Positives = 249/403 (61%), Gaps = 3/403 (0%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + + + + Q++ ++ E +L+ + Q+ L L ++ T ++ Sbjct: 25 LKVQTKSLQTQLSGTQQQLEETKLV---LSQAQAQELQLSTQLAKLETINNNLATQLTEQ 81 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 +++ E++LS QF+NLAN + E +++ QN+++L +LL PL E++ F +QV+ + Sbjct: 82 KQEVNKMEEKLSIQFKNLANELLEEKSKKFTAQNKENLEALLKPLGERIQAFEKQVEQTN 141 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 ++ + L EI L LN Q+ +EA NL +A+KGD KTQGNWGE +L +LE SGL Sbjct: 142 KEDLERNVALRTEITRLYTLNMQITKEAENLAKAIKGDTKTQGNWGEFILESILEKSGLI 201 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 + EY Q S + R QPDV+++LP K +++DAK++L+ YE++FN E + + L Sbjct: 202 KDREYVIQASFVTEEGKRYQPDVVIKLPTEKHLIVDAKVSLINYEQFFNTEQEEEKVQQL 261 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 ++H++SVR HI L K+YQ L+ LD+V+MFIP+EPAF L + + +EA + NI Sbjct: 262 KKHLSSVRRHISSLSEKNYQAEYSLQGLDFVIMFIPIEPAFSLVVQHDHAIFSEAYEKNI 321 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 ++VSP+TL+ LRTI+N+W+ E+Q++NA +IA ++ LYDK FI+D+ IG+ LD Q Sbjct: 322 IIVSPSTLIATLRTISNIWKQEYQNQNALEIAQQSGALYDKFVGFIEDLKQIGRQLDITQ 381 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 +Y +AMKKL G+GN++ + E + LG + I+ L ++A Sbjct: 382 KSYVEAMKKLYDGKGNLVTRVEKIKSLGARATKAIDQQLLDRA 424 >UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J9_9BACT Length = 550 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 136/438 (31%), Positives = 259/438 (59%), Gaps = 13/438 (2%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQ--------SEHWRAECELLNNEVRSLQ 73 + ++ AEQ + E+++ KQ+I + E+ +++ EL + +L Sbjct: 96 LRIAELSKVMAEQTTLNTSLQNEINSLKQKIAEGNATNNSLKENLKSQKELNQKQADALV 155 Query: 74 SIN---TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 ++ T + A+ +T + A + + ++ ++ QFE +AN+I E + + Sbjct: 156 QLSDKITKITAENSTLTAKNSALTEKLSTQKEEITKMQETSHLQFEKMANQILEEKSGKF 215 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 E N+ ++ +LL PL E +D F+++V++++ KE+++R +L +++ L + +++ EA N Sbjct: 216 TETNKTNIEALLKPLGENIDNFKKKVEETYDKESKQRFSLEEKVKELVEQTNKVSSEANN 275 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L ALKG K QGNWGE++L +L+ SGL + EY Q +I+++ + ++PDV+V+LP Sbjct: 276 LATALKGQAKKQGNWGEMILESILQKSGLVKDREYFLQQTIKDEGGNSLRPDVMVKLPDN 335 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 + ++ID+K++LV+Y+R+ +AE + L EH+ S+ HI L K Y L G +LD+ Sbjct: 336 RVIIIDSKVSLVSYDRFSSAETTDEQTIHLAEHLKSIYGHIDDLHGKKYDALEG--SLDF 393 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 +MF+P+EPA+L+++ + +L T A + I+L+SPT L+ L+ +A+LW+ E QS+NA + Sbjct: 394 TMMFVPIEPAYLISIQKDQDLWTYAYEKRILLISPTNLIACLKLMADLWKREMQSKNAME 453 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 I R LY+K F+ + +G+ ++K+Q +Y A+ +L+SG GN++ QA + LG++ Sbjct: 454 IVRRGDLLYEKFVTFVSTLEDVGKHINKSQQSYNAAIGQLNSGSGNLIGQALKLKNLGLK 513 Query: 431 IKREINPDLAEQAVSQDE 448 +EI + ++ Sbjct: 514 SNKEIPAAMLPTDFEPEQ 531 >UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=Pseudomonas RepID=RMUC_PSEAE Length = 453 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 177/428 (41%), Positives = 267/428 (62%), Gaps = 8/428 (1%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 +HA+ E A R E ++ W +E + E+R L S +L A+ Sbjct: 30 LGERHARFAGEVAALRREAELMGEERQRASQAEARWASERQGREEELRRLASERAALAAE 89 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 LRE Q+ ++ + ++ L QF LA +IF+ +R E ++Q L +L Sbjct: 90 LRE-------QQESHQQRLTDLQSARDELRAQFAELAGKIFDEREQRFAETSQQRLGQML 142 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 PL+E++ F ++V++S+ +EA+ER +L+ E+ LQQLN ++ +EA NLTRALKG KTQ Sbjct: 143 DPLKERIQAFEKRVEESYQQEARERFSLSKELERLQQLNLRLGEEATNLTRALKGQ-KTQ 201 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 GNWGE+VL RVLE +GL +G EYETQVS++ R QPDV++RLP K VV+DAK++L Sbjct: 202 GNWGELVLERVLEHAGLEKGREYETQVSLKGAEGERFQPDVLIRLPGDKQVVVDAKVSLT 261 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY++Y A+DD R+ AL++H+ S+RNH++ L KDY++L GL +LD+VL+F+P+E AF Sbjct: 262 AYQQYIAADDDLLRQQALKQHVTSLRNHVKGLSGKDYRRLEGLHSLDFVLLFMPIEAAFS 321 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL +P L +A NI++VSPTTLL LR I +LWR E Q++NA++IA+RA LYDK Sbjct: 322 TALQAEPNLFQDAFAQNIVIVSPTTLLATLRVIDSLWRQERQNQNAREIAERAGSLYDKF 381 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 LF+ D+ +G L + Y A KL+ GRGN+++++E + LG + + D ++ Sbjct: 382 VLFVQDLDEVGSRLQQLDKAYAAARNKLTEGRGNLISRSEQLKLLGARASKSLPTDWLDR 441 Query: 443 AVSQDEEY 450 A+ E Sbjct: 442 ALVAPVEE 449 >UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRC3_WOLSU Length = 445 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 157/402 (39%), Positives = 255/402 (63%), Gaps = 4/402 (0%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHA 97 R E++++ Q + E LL + Q A + + T ++ ++ Sbjct: 43 RNELLSQKLQNDLSQQQLSTLKEEKRLLEGRLEERQKEENRYIAQISSLETTLQKEREML 102 Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 +K R + +++RL +F LA + E R+ ++ ++L +L PL EQ+ FR++V+ Sbjct: 103 LEKERFLTQTQERLKLEFGELAQKFLEEKGERLGQKQNETLGLILKPLSEQIKTFRQKVE 162 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 ++ KE + R L +EI+NL+ LN ++++EA++L +ALKG++KTQG+WGE++L ++LE S Sbjct: 163 ETHAKEMEGRAVLENEIKNLKALNLKISEEALHLAQALKGESKTQGSWGEMILEKILEDS 222 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRE 277 GL +G EYE Q S +++ ++PDVIV LP+ +DVVID+K +L AYER+ +++ Sbjct: 223 GLSKGREYEVQTSFKSEEGRLLRPDVIVHLPENRDVVIDSKASLTAYERFIHSQQPQD-- 280 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK 337 + EHI S++NH++ L K Y L R+LD+VLMFIP+E AF+ AL P L EA + Sbjct: 281 --IAEHIRSIKNHLKELSSKSYDSLLKERSLDFVLMFIPIEGAFIEALRHDPRLFVEAYE 338 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 NI+LVSP+TLLV LRTI ++WRYE QS+NA++IA A +YDK+ F +D IG+ ++ Sbjct: 339 KNIILVSPSTLLVTLRTIHHIWRYERQSQNAEEIAREAGSMYDKLVGFTEDFLKIGEQIE 398 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 K++ Y +A+ KL G+GN++ +AE R LGV+ K+ ++ L Sbjct: 399 KSEKIYSEALAKLKEGKGNLIRRAERLRELGVKSKKSLDSRL 440 >UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUF2_9GAMM Length = 462 Score = 363 bits (933), Expect = 7e-99, Method: Composition-based stats. Identities = 144/464 (31%), Positives = 254/464 (54%), Gaps = 11/464 (2%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 I+ ++ L ++ + + A ++ A A+Q+ R E Sbjct: 7 LPIIGALLVGLTAGSVATYLLLRGTLTRHTQDAARLQQERAIAVDAEQRA------RKEI 60 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L + + A+LR R E ++ +++ Q S L ++FE L+ I Sbjct: 61 SELGAALSTKTKEAADAMAELRAAQARQEERDRNHQEQLAQFEASRALLKQEFEVLSQTI 120 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 ++ + + NR+S+ +LL+PL +Q+ F++ V + G+ + +L+ +++ L+ ++ Sbjct: 121 LKNKEQELKAGNRESIGALLNPLEKQIQNFQQNVNELRGEFLKSNTSLSEQLKALEGVSL 180 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 M+ EA +LTRALKGDNK GNWGE L + L+ +GL G +ETQ + ++ ++ PD Sbjct: 181 SMSAEANSLTRALKGDNKIAGNWGETQLEKTLQLAGLNPGEHFETQAAFKDVEGRKLIPD 240 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 +VRLP+ K++VIDAK++LV YER +AE D RE+AL H S+RNHI L KDY L Sbjct: 241 FVVRLPKDKNLVIDAKVSLVDYERAISAETDVEREAALAAHGRSMRNHIDGLSSKDYANL 300 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 PG+ + D+VLMF+ VEPA++ A+ + +L + N+++VS TTL+ LRT+ANLW E Sbjct: 301 PGMASPDFVLMFVSVEPAYIEAMRQNRDLFNYGYQKNVIMVSHTTLMPILRTVANLWMIE 360 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + AQ+I+DRA ++++ + + + +G SL A ++Y + + L GR + + + Sbjct: 361 RSNAEAQEISDRAGEIFNAVCTVAERLEGLGGSLQAASNHYNKTVTALI-GRQGLHGKVD 419 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRLRSV---PEQPNDEA 463 F+ L + + P+ + ++++ RL + P +P +E Sbjct: 420 RFQSLSAKANKTF-PESLQPIGTENDAPRLGATFDAPPKPPEEP 462 >UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7GVT5_CAMC5 Length = 530 Score = 358 bits (920), Expect = 2e-97, Method: Composition-based stats. Identities = 152/442 (34%), Positives = 252/442 (57%), Gaps = 4/442 (0%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 I L + +Q+ E L + E+ + + ++ Q+ ++L + ++ S Sbjct: 93 IIMELKVANIQSQKSVEDL--KGELESVRATLNEKQEQNAKLDENLKILTARLEAMGSQK 150 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 + LE + + + A +Q+ + + +Q L+ +F+NLAN+IFE ++ ++ Sbjct: 151 SELEKSIEVQKSDLNAKEQNLRAQEENLAQLKQSLNLEFQNLANKIFEEKTSSFNKTSQT 210 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 SL LL PLREQ+ GF+ +V + + + +L +I+ + + M++EA +LT ALK Sbjct: 211 SLELLLKPLREQIAGFQNRVNEVHSEAVKSSVSLEEQIKQVLNIGLNMSKEAHSLTTALK 270 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 G+NK GNWGE L R LE +GL +G Y TQ + ++++ R PD I+RLP K +VID Sbjct: 271 GNNKIAGNWGEAQLERTLEFAGLIKGEHYFTQQNFKSESGDRAVPDFIIRLPDEKHIVID 330 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K++L AYE +A D+ +AL EH+ SVR HI L +KDY L GL++ D+VLMF+P Sbjct: 331 SKVSLNAYEEAVSAGDEAKASAALSEHVRSVRRHIDELAKKDYASLDGLKSPDFVLMFMP 390 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 VEPA++ A+ L + ++LVS TTL+ LRTIANLWR E ++ AQQIA RA Sbjct: 391 VEPAYIEAMKFDTGLFNYGYERKVVLVSHTTLMPILRTIANLWRIERGNQEAQQIAARAG 450 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 ++Y+K+ D ++ +G +L+ A ++Y QA+ L +G +L + E F+ L + + Sbjct: 451 EIYNKVCGVADALARLGGTLNTASNHYNQAVTSLVGKQG-LLGKVERFKQLSSKAIQN-E 508 Query: 437 PDLAEQAVSQDEEYRLRSVPEQ 458 P++AE V + P++ Sbjct: 509 PEIAELNVKFEANRLEDLKPQE 530 >UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromonas RepID=Q1ZJ37_9GAMM Length = 460 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 198/430 (46%), Positives = 282/430 (65%), Gaps = 9/430 (2%) Query: 16 VAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75 + + +F ++ + + E Q Q+ + + + + SLQ Sbjct: 19 LLVVIIFMRLKNKNTELSINLQLNEQSLGF-----QQQQAVQYNEKIDSQTILIDSLQRQ 73 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 N + A +RE R +A +Q D+ ++E++LS QFE L+ RIF + + N+ Sbjct: 74 NQKITARVRESELRQQAGEQRLRDQ----QDNEEKLSNQFELLSQRIFSEKSEQFKNVNQ 129 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +SL LLSPL+ Q++GF++QV + E++ER+ L EI+ L +N M QE +NLT AL Sbjct: 130 ESLQQLLSPLQLQIEGFKKQVTQCYIDESKERYNLQSEIKKLANINLLMQQETLNLTNAL 189 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KGDNK QGNWGE+VL R+LE SGLREG+EYETQ +N+ R PDVIV LPQ KD++I Sbjct: 190 KGDNKQQGNWGEIVLQRILENSGLREGHEYETQKHYKNEQGQRFLPDVIVHLPQQKDIII 249 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D+K++LVAYER+FN++D ++ A+ H AS+R HI+ LG+KDYQ L G LDYVL+F+ Sbjct: 250 DSKVSLVAYERFFNSDDVTEQKQAISAHCASIRQHIKSLGKKDYQNLLGANRLDYVLLFV 309 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 VEPAF++A++ PEL+ AL NNI+L SPT L++ALRTI NLWR++ Q +N + IA +A Sbjct: 310 AVEPAFIVAIEHDPELVKLALDNNILLASPTNLMIALRTIENLWRFDQQHKNGRHIAAQA 369 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 SKLYDK+RLF +M +GQSL KAQD+Y A+K+LS+GRGNV+AQAEA R +GV + + + Sbjct: 370 SKLYDKLRLFSHNMLDVGQSLGKAQDSYDHALKQLSTGRGNVIAQAEALRQMGVVVNKPL 429 Query: 436 NPDLAEQAVS 445 L A S Sbjct: 430 PESLVTNAGS 439 >UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q21KA3_SACD2 Length = 494 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 171/491 (34%), Positives = 285/491 (58%), Gaps = 18/491 (3%) Query: 1 MDFSIMVYAVIALVG--VAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M + + + + AL+ +A+ A A+++ ++ E + +L++A+ + Q + Sbjct: 1 MPLTAVDWMLPALIVSILALVACVAFLISARKRLSEVLEAKRTGEDLASAQLRAEQDKGA 60 Query: 59 RAECELLNNEVRSLQSINTSLE----------------ADLREVTTRMEAAQQHADDKIR 102 A EL ++ + +N +L + ++ R + + + + Sbjct: 61 AALRELELSQAKLQADLNAALRTISELKVENQDLHKTREEYLQLQVRYQEQSEKRVTEQK 120 Query: 103 QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGK 162 + ++Q L ++FE A ++F+ R + N++ L +LL P REQ+ F ++V+D + K Sbjct: 121 LLEETKQALFKEFELAAGKLFDEKKERFESSNKEGLQALLQPFREQITAFNKRVEDVYDK 180 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 E +R+ L +I LQ+ Q++ EA NL ALK DNK QG+WGE+VL R+LE SGL++G Sbjct: 181 ENTQRNQLVGQIIELQKQTQQISAEANNLAAALKNDNKIQGSWGEIVLERLLEQSGLQKG 240 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 EY+TQ S + SR +PDVIV LP KD+VID+K++LV YERY +AE+ +E AL+ Sbjct: 241 REYDTQKSFSSADGSRFRPDVIVHLPDEKDIVIDSKVSLVDYERYCSAENQAEKEIALKA 300 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H+ SVR H++ L K Y+ L G+RTLD+V +F+PVE A+++A+ P L EA NI++ Sbjct: 301 HVDSVRAHVKGLSLKQYENLEGIRTLDFVFVFVPVEAAYIVAIQSSPTLFKEAYDRNIVI 360 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 VSP++L+VALRT+ +WRYE Q+ NA+QIA A KLYD+ LF+D + +G++LD+ QD Sbjct: 361 VSPSSLMVALRTVETIWRYEKQNANAEQIAASAGKLYDQFALFVDSLEEVGKNLDRTQDA 420 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 + +A K+L+ GRGN+L + + + LG + R + +D E + + Sbjct: 421 FGKAKKRLTEGRGNLLRKIDGLKELGAKTSRRLPEAYRVDQDDEDTESSGQKKAVKGQIG 480 Query: 463 AYQRDDEYNQQ 473 +D E + + Sbjct: 481 LLVKDTEASTE 491 >UniRef50_B9L835 DNA recombination protein RmuC family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L835_NAUPA Length = 533 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 159/409 (38%), Positives = 266/409 (65%), Gaps = 9/409 (2%) Query: 41 MVAELSAAKQQITQSEHWRAEC----ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 + EL K ++ ++E + L E+ + ++ L + +E+ T++E +++ Sbjct: 126 ISVELQEFKTKLYENEKMLNKKNEELIELKEELDRYREQSSRLSVENQELKTKLEESEKA 185 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 ++K+ + SE++L E FENLAN I E +N ++ + +++SL+ +L+PL+ Q+ F+ ++ Sbjct: 186 FEEKLELLKKSEEKLKESFENLANEILEKTNEKMTKTSKESLSQILNPLQNQMKEFKEKI 245 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 + EA++ L +E++NL++L+ +++ +A NLT+ALKG++KTQGNWGE+VL RVLE Sbjct: 246 EFLSKDEAEKISALQNELKNLKELSHKLSTDAENLTKALKGESKTQGNWGELVLERVLEL 305 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR 276 SGL EG E+E +VS+ ++ R +PDV+V LP +DV+IDAK +L AY+ Y ED Sbjct: 306 SGLTEGREFEREVSLNDEDNKRYRPDVVVHLPNQRDVIIDAKTSLNAYQEYIKTED---- 361 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 ++ ++ HI +++ HI L K Y+ L G+ +LD++ MF+P+E A +LAL+ L A Sbjct: 362 KTYIKAHIQALKKHIDDLADKKYEDLKGVNSLDFIFMFVPIENALMLALENDSSLFEYAF 421 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 K ++LVSPTTLLV+LR I + WR+E Q++N ++ A LYDK+R F +D IG+SL Sbjct: 422 KKRVVLVSPTTLLVSLRAIESSWRFERQAKNIDEVVKAAESLYDKVRGFTEDFEKIGKSL 481 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL-GVEIKREINPDLAEQAV 444 + AQ ++ A KL++GRGNV+ Q E + G++ K+EI+ DL + AV Sbjct: 482 ESAQKSFDNAKNKLTTGRGNVIRQVELLKEKAGIKPKKEISKDLIDIAV 530 >UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZP5_9FLAO Length = 441 Score = 357 bits (917), Expect = 5e-97, Method: Composition-based stats. Identities = 136/396 (34%), Positives = 231/396 (58%), Gaps = 1/396 (0%) Query: 46 SAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMI 105 + +++ + + E L E++S ++ ++ L T +E ++ +M Sbjct: 45 ESVRREQKSKDEFITANEKLRAELKSEENERFQIQNKLTRKETELEGLVSKWREQKSEMQ 104 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 +++ SE+FENLA RI E + + QN++++ +L PL+E+L F +++ + + Sbjct: 105 ALQKKFSEEFENLAQRILEQKSEKFTLQNQKNIAHILDPLKEKLTSFETKIEKTNSDFLK 164 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 L +++ L + N ++++EA NLT ALKG +KTQGNWGE++L +VLE SGL +G EY Sbjct: 165 GHIQLEQQLKYLNEQNLKISEEANNLTNALKGSSKTQGNWGEMILEKVLEKSGLTKGREY 224 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 + Q +++ PDV+V LP K ++ID+K++L AYERY N++D+ + L+ H+ Sbjct: 225 QVQQHFKDENGLSKLPDVVVYLPNEKKMIIDSKVSLKAYERYINSDDEQEKAGHLKAHVK 284 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 S+ H++ L K+Y+ L G T D++LMF+P+EPA LA A ++NI++VSP Sbjct: 285 SMETHLKGLKDKNYELLGGNSTPDFILMFVPIEPALFLAQSENSNFFYSAFQDNILMVSP 344 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTLL LRT+ +W E Q +NA QIA A LYDK I+ + +G +D + Y + Sbjct: 345 TTLLSTLRTVDMVWSNEKQQQNAVQIAKHAGDLYDKFVNLIEGLDEVGNRIDSTKSTYDK 404 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 AMKKL +G+ N++ + + +GV K+ +N + Sbjct: 405 AMKKL-TGKQNLIKDVTSLKEMGVTSKKVLNSKWTD 439 >UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaproteobacteria RepID=Q3ICM4_PSEHT Length = 488 Score = 357 bits (916), Expect = 5e-97, Method: Composition-based stats. Identities = 143/408 (35%), Positives = 262/408 (64%), Gaps = 1/408 (0%) Query: 36 AEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQ 95 +R++ + +Q QS+ + + E+ +L+ + + +L + T +E QQ Sbjct: 77 EQRDQAQHFKTRFTEQEKQSQQYNQFWQKAEAELSALRKQYSQCDVELNNIRTTLEQKQQ 136 Query: 96 HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQ 155 H +++ Q+ S++ L ++FENLAN+I E +++ N++S+ LL P++ +L GFR + Sbjct: 137 HFSEQLAQIEQSKEMLKKEFENLANQILEEKSQKFKVLNQESIEQLLKPVQGELKGFRDK 196 Query: 156 VQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLE 215 ++ ++ ++R L E+ +LQ + + ++A L+ AL+G KTQGNWGE++L VL+ Sbjct: 197 MESIHVEDLKQRAALKTELLHLQAKSQAITEQADRLSNALQGQKKTQGNWGELMLENVLD 256 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYT 275 ++GLR G +Y+ +VS + R++PDV+V LPQG+ +VIDAK +L AY RY NA+++ Sbjct: 257 SAGLRAGVDYKREVSFNTEDG-RLRPDVVVYLPQGRHLVIDAKTSLNAYTRYVNADNELE 315 Query: 276 RESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA 335 + A++EH+ +V+ I L K Y +LPGL + + V+MF+P+E AF+ AL Q ++ +A Sbjct: 316 AQQAIKEHVEAVKARINELASKSYDRLPGLNSPEVVVMFVPIESAFVEALKYQSDIYQQA 375 Query: 336 LKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQS 395 ++ NI++ +PTTLL +L + LWR+E Q++ ++++A RA + Y+K+ F+ M +G+ Sbjct: 376 IEKNILVATPTTLLTSLNIVKQLWRFEEQTKYSKELAARAERFYNKLNGFLTSMEGVGKQ 435 Query: 396 LDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 LD+A+++Y +A +L G+GN++ QA F+ LGV +++E+ + E+A Sbjct: 436 LDRAKESYDKAFSQLYRGKGNLIKQASEFKELGVSVQKELPAESVERA 483 >UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQC9_BDEBA Length = 412 Score = 356 bits (914), Expect = 9e-97, Method: Composition-based stats. Identities = 143/377 (37%), Positives = 227/377 (60%), Gaps = 10/377 (2%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE-------QRLSEQFENLANRI 122 S + LEADL + + Q ++ M+++ QR++ QFE +A +I Sbjct: 31 AQFASEKSQLEADLSTAQMKNDLLSQSLSEQKTLMVDARKQQEELSQRMNTQFEVMAQKI 90 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 FE + + +QN +++ S+L PL+E++ F ++V++++ E ER L E+ L +LN Sbjct: 91 FEEKSAKFTDQNHKNIASVLEPLKERIKDFEKKVEETYSTERSERGVLRGELTKLMELNK 150 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS---IENDARSRM 239 M+ E NLT+ALKG+ KTQGNWGE++L +LE SGLR+G EY Q + + + + Sbjct: 151 VMSAETQNLTKALKGEVKTQGNWGELILENILERSGLRKGEEYVIQGTDMDLRGEDGQIL 210 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PDVIV LP K +++D+KMTL+AYE+Y +AE +E + HI S++ HI L K Y Sbjct: 211 RPDVIVNLPDEKHLIVDSKMTLIAYEQYSSAETAEEQERLGKLHIDSLKKHIDGLSEKKY 270 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 L + D+V++F+P+EPAF LA +PE+ A + N+ +VSPTTLL LRT+A LW Sbjct: 271 HAADKLISPDFVILFMPLEPAFALAFKLKPEIFQYAWERNVAIVSPTTLLATLRTVAALW 330 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + + Q +NA +IA R LY+K + D+ +G+ L AQ + +KK+S GRGN++ Sbjct: 331 KQDRQEKNALEIAKRGGLLYEKFAGLLKDLQHLGEKLGAAQKAHEDVIKKVSEGRGNLID 390 Query: 420 QAEAFRGLGVEIKREIN 436 Q E + LG + ++ + Sbjct: 391 QVEDLKRLGAKTEKSLP 407 >UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasmataceae RepID=Q5HB78_EHRRW Length = 436 Score = 356 bits (913), Expect = 1e-96, Method: Composition-based stats. Identities = 136/387 (35%), Positives = 237/387 (61%), Gaps = 10/387 (2%) Query: 58 WRAECELLNNEVRSLQSINTSLEADL---REVTTRMEAAQQHADDKIRQMINS----EQR 110 + L E L+ N L +L + T +E +++ ++ + + +++ Sbjct: 42 LEERIKNLEIENSQLKDRNDILNVELCNVKSKITEIEYEKKNLENTVNLYKSEFSTIDEK 101 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 FENLANRIFE + ++ ++++L+++L+PL+E ++ F+++V+DSF QE+ L Sbjct: 102 YKLCFENLANRIFEEKTDKFNKISQENLSNILNPLQEHINLFKKKVEDSFNIHNQEQFLL 161 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 EI+ + N ++ +A NL LKGD K QGNWGE++L ++LE SGLR+ +Y + Sbjct: 162 KKEIQRIVLANEKITLQAENLANVLKGDIKIQGNWGEMILEKILENSGLRKNQDYVLHAT 221 Query: 231 ---IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 ++++ ++ QPD I+ LP+ K ++ID+K++L+ YE+YF + + ++ + L++ IAS+ Sbjct: 222 GLNLKDNEGNKQQPDAIINLPENKHLIIDSKVSLIHYEKYFVTKSEESKNNLLKQFIASI 281 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 R+H+ +L K YQ + L+T D+VLMFIP+E A+ LA+ L A I++V P+T Sbjct: 282 RSHVNVLSCKKYQDIEKLKTPDFVLMFIPIEGAYSLAMQEDLMLHNYAWNKKIVIVCPST 341 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 LL L+TI +LW+ E+Q+RN +IA + LYDK+ FI DM +G+ + + Y AM Sbjct: 342 LLATLKTIESLWKLEYQNRNTMEIARQGGALYDKIIGFISDMQKLGKQMGILHNVYNDAM 401 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKRE 434 KKLS G GN+L++ E + LG++ ++ Sbjct: 402 KKLSEGHGNILSRTENLKLLGIKTSKK 428 >UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YX61_METPS Length = 520 Score = 354 bits (909), Expect = 4e-96, Method: Composition-based stats. Identities = 119/440 (27%), Positives = 231/440 (52%), Gaps = 25/440 (5%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 Q + A+ + + SAA+++ + + + ++ LQ+ NT + + Sbjct: 70 QARSEAAQLREQVRAESDKRSAAEEKNNRIPELDSTIRAKDITIKDLQAQNTENQKQIEH 129 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD-------------- 131 + T +E ++ ++K+ + ++Q+LS+ F L+ +++N+ Sbjct: 130 LNTTLEKERKSTEEKLALLNEAQQKLSDAFNALSAEALKNNNQSFLDLAKTTLENYQNGA 189 Query: 132 ----EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 E ++++N +++PL+E LD ++Q+ + L +++ L Q + E Sbjct: 190 KVDLEVRQKAINDMVTPLKESLDKVDVKIQEMEKERVSAYTELKEQVKTLSQTELLLQSE 249 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 NL +AL+ + +G WGE+ L RV+E SG+ +++ QV + N++ ++PD+I+ L Sbjct: 250 TSNLVKALRAPS-VRGQWGEIQLKRVVELSGMVNYCDFKEQVPLRNES-CNIRPDMIIYL 307 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P K++++D+K L AY A+DD + L +H + V+ HI L K Y Q T Sbjct: 308 PNRKNIIVDSKAPLYAYIDAIEAKDDDIKNEKLIDHASQVKKHITQLSDKSYWQQFN-DT 366 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V+MF+P E F AL++ P LI ++ N++L +PTTL+ L+ +A WR E + N Sbjct: 367 PEFVVMFLPGETFFSAALEKDPTLIEFGVERNVILATPTTLIALLKAVAYGWRQEQIAEN 426 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A++I + +LY+++ F D+MS +G+ L KA ++Y A+ + S +L A F+ L Sbjct: 427 AEEIKNLGKELYNRIITFNDNMSEVGKGLKKAVNSYNSAVGSMES---RLLVSARRFKEL 483 Query: 428 GVEIKREI-NPDLAEQAVSQ 446 G+ ++I +P + EQ+V Sbjct: 484 GISTDKDIDSPLILEQSVRD 503 >UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ3_9FLAO Length = 501 Score = 353 bits (905), Expect = 1e-95, Method: Composition-based stats. Identities = 144/493 (29%), Positives = 266/493 (53%), Gaps = 52/493 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKA---------EQLAEREEMVAELSAAKQQ 51 M + I+ + L+G I + + + + +E E ++ Q Sbjct: 3 MIYLIIGFVAGGLLGAIILYFALKSSTVSRSSYDTLNALSIKAQSELENSNLKIQELTQN 62 Query: 52 ITQSEHWR------------------AECELLNNEVRSLQSINTS--------------L 79 I++ + AE LN + + L+ IN L Sbjct: 63 ISKEKEVNMLQQDLMDDLKNEFSKISAEYSSLNIQFQELKQINQRQISQIETHILEKQTL 122 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN 139 A E+ + E Q+ D + ++I ++ QFENLAN+I E + N+ +L Sbjct: 123 FAKNSELLAKNEGLQKSLDTQKEEIIKIQEESKLQFENLANKILEEKTEKFTTLNQNNLK 182 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 ++L P +E++ + +V +++ KE +ER +L +++ L +LN Q++++A LTRALKG++ Sbjct: 183 NILEPFQEKIADLKNKVNEAYEKENKERFSLAEKVKELAELNQQISEDAKKLTRALKGES 242 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA---------RSRMQPDVIVRLPQG 250 KTQGNWGE++L +LE SGL +G EY + + ++ +M+PD +V+ P Sbjct: 243 KTQGNWGEMILESILEKSGLVKGREYFLEHELRDEDNNALFSEFSGKKMRPDAVVKYPDE 302 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 ++V+ID+K++L A+ + D L +H+ S++NHI L +K Y ++LD+ Sbjct: 303 RNVIIDSKVSLTAFTELVDETDVDVYAIKLSQHLGSIKNHINQLSQKAYDDY--GKSLDF 360 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 V+MFIP EPA++ A+ L A + I+L++P+ L+ +L+ IA+LW+ E+Q+RN+ + Sbjct: 361 VMMFIPSEPAYIAAMQADQNLWNYAYERRILLLNPSNLITSLKLIADLWKREYQNRNSME 420 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 IA+R +KLYDK F+D++ +G++LD+A++ Y +A K+L +G N++ Q + + LG++ Sbjct: 421 IAERGAKLYDKFVGFVDNLEKVGRNLDQAKNVYNEAYKQLHTGNDNLVIQTQKLKSLGIK 480 Query: 431 IKREINPDLAEQA 443 K+++ L + + Sbjct: 481 NKKDLPQSLIDNS 493 >UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFZ0_9RHOB Length = 407 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 140/392 (35%), Positives = 232/392 (59%), Gaps = 1/392 (0%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 A ++ + + + L ++ T+L + E+ + A ++ +D+KI + Sbjct: 2 ADERKKEVDRLNQDLSKLRGKLDLENEEKTNLSNKVSELIAQGLAERKSSDEKIEILTQF 61 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 + + +F+ LA+ + + N + L + L PL+E + F ++++ + ++R Sbjct: 62 RKDMESKFKELASEALQLQGESFSKSNIEKLEATLLPLKEHVGHFEKELRQVHEETVKDR 121 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L EI L + + Q++Q A+ L++ALKGD++ QG WGE++L +LE SGLR G EYE Sbjct: 122 ERLKAEINQLSKKSDQISQNALELSKALKGDSQMQGAWGEMILESILEKSGLRVGEEYEI 181 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q +N+ R++PDV+V LP GK +VID+K++LVAY N+E++ A + HI S+ Sbjct: 182 QAHRKNEDGERLRPDVVVNLPGGKTLVIDSKVSLVAYTDAVNSENEIDTIEAQKRHIVSI 241 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 RNHI L K YQ ++DYV++FIP+E A AL + A++ NI + +PTT Sbjct: 242 RNHINGLSAKGYQFAENS-SVDYVILFIPIEGALSEALRMDGRITEYAMEKNITIATPTT 300 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L++AL+TI+N+W E +++NA+ IADRA KLYDK+ F+ +M +G+ L +AQD+Y A Sbjct: 301 LMMALKTISNVWDVERRNKNAELIADRAGKLYDKVSGFVLNMEKVGERLTQAQDSYDTAF 360 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 + S GRGNVL+Q E + LG + + I+ D Sbjct: 361 NQFSKGRGNVLSQVENLKTLGAKTSKSIDTDF 392 >UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5WXK8_LEGPL Length = 630 Score = 351 bits (902), Expect = 3e-95, Method: Composition-based stats. Identities = 139/435 (31%), Positives = 250/435 (57%), Gaps = 6/435 (1%) Query: 32 AEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRME 91 +++ + + + A++Q+ + + +E + R LQ N SL + E+ T +E Sbjct: 171 SQEGKKTKSLEVSEKEAREQLNEIKLKMSEQI---TDYRQLQERNQSLSNEYTELKTTLE 227 Query: 92 AAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 ++H ++++Q+ ++ L+ +FENLAN+IFE + ++ S++++L P REQ++G Sbjct: 228 RKEEHFKEQMQQLNEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNILKPFREQIEG 287 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLT 211 F++++ + Q +L+ EI+ + + QM++EA NLT ALKG+++ +G WGE L Sbjct: 288 FQKRINEVHDASIQGNTSLSFEIKKVLDIGLQMSKEANNLTSALKGNSQQRGAWGEAQLR 347 Query: 212 RVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAE 271 R LE SGL E YE Q S ++ + Q D +++LP GK ++ID+K+TL AY+R AE Sbjct: 348 RTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLNAYDRAVAAE 407 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 + A+ EH+ +VR HI L KDY L G+R+ +VLMF+P+EPA++ AL +L Sbjct: 408 SPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYIEALKSNKDL 467 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSA 391 I+LVS TTL+ LRT++NLW E + A++I+++A ++Y+++ + + +S Sbjct: 468 FEYGYNKGIVLVSHTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQVCIVAERLSK 527 Query: 392 IGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 +G +L A ++Y +K L +G + + + F L ++ + + E + E R Sbjct: 528 LGSTLSIASNHYNNTVKALVGQQG-LYGKVDRFSQLSAKVSKSMPQ--LEPSHMDFETER 584 Query: 452 LRSVPEQPNDEAYQR 466 L + E ++E Q Sbjct: 585 LSLIIEPIDEEQVQS 599 >UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B9E2_PARDP Length = 504 Score = 347 bits (891), Expect = 5e-94, Method: Composition-based stats. Identities = 158/448 (35%), Positives = 249/448 (55%), Gaps = 20/448 (4%) Query: 18 IGWLFASYQHAQQKAEQLAEREEMV-----AELSAAKQQITQSEHWRAECELLNNEVRSL 72 + L+ + + A+ Q RE + AE +A + Q+ E L ++ L Sbjct: 51 LVALWRTRRSAEAADAQARRREGELQARCDAESAALRDQLLAVSRLETRAESLTQRLQEL 110 Query: 73 QSIN--------------TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 + LE DL E + ++ A+ I + + ++ QF L Sbjct: 111 IEERDGLTDALHRERQQVSRLERDLAETRLAAQKDREAAERDIATLRELREEMTGQFRLL 170 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 A+ + + + + + L++LL+P R+Q+ F+ ++Q +ER L +I L Sbjct: 171 ASETLKSQGGEMQKVHGEQLSALLTPFRDQVHRFQTELQARNKATDEERARLREQIEYLH 230 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + + +++EA+ LTRALKGD++ +G WGE++L R+LE SGL G Y+TQ S + Sbjct: 231 KRSEDISREAVALTRALKGDSQKRGAWGEMILERILEDSGLIAGTHYDTQSSHRDGDGKL 290 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKD 298 +PDVIV++PQ K +VID+K++L AYE NAED TR++AL+ H+ASVR H+ L K Sbjct: 291 WRPDVIVKMPQKKLLVIDSKVSLNAYEEAVNAEDLPTRDAALRRHVASVRAHVAGLAAKG 350 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 YQ + ++DYVLMFIPVE AF AL P+L A++N + L +PTTL++ LRT+ ++ Sbjct: 351 YQAI-DESSVDYVLMFIPVEGAFSEALRVDPDLARFAMENRVGLATPTTLMLTLRTVDHI 409 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 W E + NA QIA RA +LYDK+ F+ + +G +LD+AQ ++ AM +L+ G GNV+ Sbjct: 410 WTVERRESNAMQIAARAGQLYDKLHGFVSAVEDVGAALDRAQKSHATAMDRLTRGPGNVI 469 Query: 419 AQAEAFRGLGVEIKREINPDLAEQAVSQ 446 QAE R LG ++ I D AV + Sbjct: 470 RQAEMLRDLGARTQKRIALDHDGGAVLE 497 >UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z617_9GAMM Length = 564 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 152/456 (33%), Positives = 246/456 (53%), Gaps = 15/456 (3%) Query: 22 FASYQHAQQKAEQLAEREEM------VAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75 FAS + + A+ +E+ AELSAA+ +I + + + L +E + L Sbjct: 85 FASIEKNRLGAQLAESNDELLILRQGQAELSAAQARIL---GLQRDLDELKSERQLLLEK 141 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 + + T E +++ + + NS + LS+QFENLAN++FE ++ + N Sbjct: 142 LEKQTTEAAVLVTEREQQEENLRVQKEFLKNSSESLSQQFENLANKVFEQKGKQFADANH 201 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +L LL PL+EQ+ GF+ +V + + +L I ++ L ++ Q+A NLT AL Sbjct: 202 TTLGGLLKPLQEQIAGFQSRVNEVHDASTKNHTSLQQAIDGVKDLGLKIGQDASNLTTAL 261 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KGD++ +G WGE L R LE SGL EG Y Q S + A + D +VRLP+ + ++I Sbjct: 262 KGDSQQRGAWGEAQLQRTLEISGLIEGDHYTMQDSFSDGAGKIKRTDFLVRLPENRQLII 321 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D+K+TL AYER AE + A+ EH+ +VR HI L KDY L G+++ YVLMF+ Sbjct: 322 DSKVTLNAYERTIAAETPEEYKRAMTEHVHAVRKHIDDLASKDYTNLTGMKSPSYVLMFM 381 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 P+E A++ AL EL I+LVS TTL+ LRT+ANLW E + A++I+D A Sbjct: 382 PMESAYIEALKHNKELFQYGFSKQIVLVSHTTLIPILRTVANLWMLERSNAEAKEISDMA 441 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 + +Y+K+ + + ++G SL ++Y +A+ L+ +G + + + FR + +I +E+ Sbjct: 442 ADIYNKVAGVAEGLRSLGGSLTTVGNHYNKAVVALAGKQG-LFGKVDKFRKISTKISKEL 500 Query: 436 NPDLAEQAVSQDEEYRLRSVP---EQPNDEAYQRDD 468 E E RL V E+P ++ + D Sbjct: 501 PD--LEPRDFDLETSRLELVVESIEEPIEDPIEDPD 534 >UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylobacterales RepID=Q30U13_SULDN Length = 626 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 142/439 (32%), Positives = 238/439 (54%), Gaps = 2/439 (0%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 ++E+ + A + + + + + + ++ SLQ N L+A+ + + Sbjct: 190 QSEKSVLQANSNALNESKNELLQAIKLLKDDLTSAQVKIESLQESNGELKAEKSKFQAEL 249 Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 A Q++ + + ++L + + + + ++ DE + +SL+ LL P +E LD Sbjct: 250 SAQQENNEKLKKDFEEQSKKLELKLNEIMQQNLDSKLKKFDETSMKSLDGLLKPFKENLD 309 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 F+++V+DS ++ L+ EI + + +++EA +LT+ALKG + QG+WGE++L Sbjct: 310 TFKKKVEDSQENSTKKFAELSKEIEQVTKAGMNISKEAESLTKALKGKKQMQGSWGEMIL 369 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNA 270 VLE SGLR+G YETQ S +++ + +PDVI++LPQ + ++ID+K++L Y Y +A Sbjct: 370 ESVLEYSGLRKGAHYETQESYKDEEGNTKRPDVIIKLPQERTIIIDSKVSLNDYSNYIHA 429 Query: 271 EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPE 330 E D R A + S +NHI L KDY + TL YV MF+P+E AF +A+ + P+ Sbjct: 430 ETDEERLLATNGIVTSFKNHIDTLDSKDYAHY-KVGTLQYVFMFVPIEGAFAMAIQQDPK 488 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L ALK +I +V+P+TL V+LRTI W+ E + A ++ D A KLYDKM F D Sbjct: 489 LYEYALKKHIAIVNPSTLTVSLRTIYLYWQSEQSNTLASKLFDEAGKLYDKMVGFSDSFG 548 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 IG+ L A Y A K+L+ G GN++ + E + LG + + E + E Sbjct: 549 KIGKQLQSATSTYEHAHKQLTEGPGNLMGRVENLKRLGARTSKTLKDSKMEFQDFDEAEM 608 Query: 451 RLRSVPEQPNDEAYQRDDE 469 + +PE P E DD+ Sbjct: 609 EIELLPE-PVIETLSSDDD 626 >UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacteroides RepID=B0NNN3_BACSE Length = 482 Score = 344 bits (883), Expect = 4e-93, Method: Composition-based stats. Identities = 154/479 (32%), Positives = 254/479 (53%), Gaps = 31/479 (6%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +I++ + G IG+L A + A K + A E A+++I + E Sbjct: 1 MNIILLPAGIIAGAVIGYLTAGRKAAALKTQVEAAGEREALLNRTAEERIARERSIAEER 60 Query: 63 --------------------ELLNNEVRSLQSINTSLEADLREVTTRMEAA-QQHADDKI 101 E L + RS E E + + +Q ++ Sbjct: 61 LQEAARQASERLDAQERLFAERLAEQARSFNERLAQQEHSFGERIAQQQRQWEQRLAEQK 120 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + +R++ +FENL+NRIF+ N + L +LL PL E++ F+ +V+ + Sbjct: 121 EEAEALHKRMNTEFENLSNRIFQSKTEDFTRLNAEHLGNLLRPLDEKIKDFKEKVEQVYS 180 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 EA+ER +L I+ L +LN +++++A NLTRALKGD+K QGNWGE++L R+L+ASGL E Sbjct: 181 TEAKERFSLGERIKELVELNNRLSEDANNLTRALKGDSKMQGNWGEMILERLLQASGLIE 240 Query: 222 GYEYETQVSIEN---------DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 G Y Q +++ ++ +MQPD+++R P ++++ID+K++L AY Y +AED Sbjct: 241 GEHYFRQEFLKDERGEAIVSEESGQKMQPDILIRYPDEREMIIDSKVSLTAYAAYTSAED 300 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 + L+ H+ SVRNHI L RKDY ++ D+V+MFIP E A+LLA+ L Sbjct: 301 RDEQARWLKAHLQSVRNHIDELSRKDYSHY-DIKAPDFVMMFIPTEGAYLLAIQSDANLW 359 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A ++L+SPT L+ ALR +LW+ E+Q +N Q I R + LY+K+ F D + Sbjct: 360 EYAYNKKVVLMSPTNLISALRLSLDLWKRENQVKNVQAIIKRGTALYEKIVGFTDTFLTL 419 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 G + Q +Y +A+ +LS G G+V+ QAE + + + K+ I+ L + Q++ + Sbjct: 420 GDRMATLQKDYDKALNQLSEGNGSVVRQAEMLKDMSLTPKKRISARLLPKEEIQEDAEQ 478 >UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q883E2_PSESM Length = 639 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 150/438 (34%), Positives = 243/438 (55%), Gaps = 7/438 (1%) Query: 19 GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS 78 L HA + EE + Q Q E L + L + Sbjct: 194 QLLELKAAHANSQTRIEKAEEEFKKQREQLGQAAEQKEQLDVLRGTLVQRDKELGVVRDE 253 Query: 79 L---EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 L + L EV R Q A +K++ + +++ +L ++F+NLAN+IF+ + EQ+R Sbjct: 254 LSLAKQSLAEVNMRHARDQHSAAEKLQLLEDNKVQLKQEFQNLANQIFDSKQQSFSEQSR 313 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 Q L++LL P ++QLD FR++V Q + ++ +E+ L +LNAQ+ EA NLT+AL Sbjct: 314 QGLDTLLKPFKDQLDSFRQRVDQVHSDTVQGQSSMKNELVKLMELNAQITTEASNLTKAL 373 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KGD K QG WGE + +LE +GLR+G+EY + + +ND +PD +V LP+GK ++I Sbjct: 374 KGDKKLQGTWGEQKVEMLLEQAGLRKGFEYHREANFKNDEAGNNRPDFVVNLPEGKHIII 433 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D+KM+LVAY Y +AE D R AL H+ +++NHI L K Y L G+ + D+V +F+ Sbjct: 434 DSKMSLVAYTEYVSAETDEERTRALSAHVLALKNHINGLSDKKYTDLNGINSSDFVFLFM 493 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 PVEPA+L+A + P + A + I +++ TTLL LR ++NLW + Q+ + Q+A A Sbjct: 494 PVEPAYLVAAEHSPGVFQAAYEKRIAIITATTLLPVLRVVSNLWSIQRQNSSTLQLATMA 553 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 +K+YDK+R+F++ M +G + Q +Y +++ L G++ + F LGV + + + Sbjct: 554 TKVYDKLRVFVEKMDKLGNQIATVQKSYNESITTLKGDHGSLTKTVDKFVALGVTVSKRL 613 Query: 436 NPDLAEQAVSQDEEYRLR 453 A+ +DEE Sbjct: 614 PA----SAIGEDEELESE 627 >UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A093_DESOH Length = 456 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 129/453 (28%), Positives = 220/453 (48%), Gaps = 19/453 (4%) Query: 1 MDFSIMVY--AVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M ++Y A AL G+ WL + A + + + + + T+ + Sbjct: 1 MHIPEIIYSAAAGALAGIFFTWLVMRARRA-------VLADRLASATTEIETTRTERDAL 53 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFEN 117 R E + L+S +E+ +AA Q D + + ++ + SEQF + Sbjct: 54 RGELSDHSARFARLESALEQEREKSKEMAAFAQAATQTLKDTFKGLSADTLAQSSEQFLH 113 Query: 118 LANRIFEH---SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 LA FE Q ++++ ++ P++E LD QV + Q +LT + Sbjct: 114 LAKSAFESFHVKASGDLAQRQKAVEEIVRPVKEALDKVNTQVAEVEKSRKQAYGSLTATV 173 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +L + +++ E NL AL+ +G WGE+ L RV+E +G+ ++ Q S++ + Sbjct: 174 ESLLRGQKELSTETGNLVSALR-KPMVRGRWGEIQLRRVVEFAGMLPHCDFVEQSSVKTE 232 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 + ++PD++VRLP GK VV+D+K L AY +AED+ TR+ + +H +R HI+ L Sbjct: 233 TGT-LRPDMLVRLPGGKLVVVDSKAPLEAYLSAVSAEDEATRKKFMADHTRHLRTHIQQL 291 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K Y + + D+V++F+P EP F AL++ LI A+ I+L SPTTL+ L+ Sbjct: 292 SDKAYWEQFD-QAPDFVVLFLPGEPFFSAALEQDEGLIEFAVARRIILASPTTLITLLQA 350 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 ++ W+ E + NA+ I + + LY ++ D +G+SLD+A +Y A+ L + Sbjct: 351 VSYGWQQEQIAENARHIQELGADLYRRISKMADHFGTVGKSLDRAVKSYNDAVGSLEA-- 408 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 VL A F L IK EI VS+D Sbjct: 409 -RVLPAARRFSELDTSIKNEIPKIEPVNVVSRD 440 >UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MXW6_PORGI Length = 432 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 143/452 (31%), Positives = 238/452 (52%), Gaps = 36/452 (7%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD ++ ++A+V + WLF + E + + A+L AA +++ Sbjct: 1 MDLYWLI-IIVAIVAGLVVWLFHRRHNT--------ETDRLTAQLEAATEKLAD------ 45 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 L E + I T LE L+ T+ +E + + + + F+ A+ Sbjct: 46 ----LQEEQKEAIRIRTELETRLQATTSELEREWKRSG-------QISEEMQALFKATAS 94 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 I E R++ N + + +L PL E + F +V+ S+ +EA+ER +L E++ L + Sbjct: 95 EILEDKTRKLSGMNEERIGEILKPLSEHIKLFEEKVEKSYNEEARERFSLAKELQKLIEQ 154 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA----- 235 N++++ +A NLTRALKGD K QG+WGE++L +L SGL EG E+ Q ++ ND Sbjct: 155 NSRLSDDANNLTRALKGDPKVQGDWGEMILENLLRRSGLTEGEEFFIQETLTNDEGRTLL 214 Query: 236 ----RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 RM+PDVIVR P G++V+ID+K++L AY + +ED+ R+ L EHIAS+ HI Sbjct: 215 HDETGRRMRPDVIVRYPNGQEVIIDSKVSLTAYASFVASEDEAERKRLLGEHIASISRHI 274 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K YQ + ++V++FIP EPA+ LAL +P L +A ++L++PT L+ A Sbjct: 275 EELASKSYQDYCD-KAPEFVMLFIPNEPAYTLALREKPTLWDQAYNKRVLLMNPTNLIAA 333 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LR +LW+ + Q +N Q+I ++A+ LYDK F + + + +A +L Sbjct: 334 LRMALDLWQRDRQVKNVQRIVEQANGLYDKFCTFAETLIRAEEQAQNTVATLAKARGQLV 393 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 GR N++ + E R LG+ K+ + + Sbjct: 394 EGRSNIVGRIEKMRSLGLSPKKNVPASFRPET 425 >UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorobiaceae RepID=A1BFC3_CHLPD Length = 437 Score = 341 bits (876), Expect = 2e-92, Method: Composition-based stats. Identities = 145/396 (36%), Positives = 241/396 (60%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + + K+++ Q E +E+++ L+ + + ++ + +A +K Sbjct: 23 RILRDAPLKEELHQLRVVERELRSQVDELKAKTGELDILKVIRARLESDLDHERSNALEK 82 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 I + SE RL +FE+LA RI E + E+NR + SLL PL+EQLD FR +V + Sbjct: 83 IALLQQSELRLKTEFEHLAGRILEERGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVH 142 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 + + L ++R LQ+L+ Q+++EA L RA+KG++K QG+WGE+++ R+ EASGL Sbjct: 143 RNDTEISARLIEQVRQLQELSGQVSREANLLARAIKGESKAQGDWGELIIERIFEASGLE 202 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 +G EY Q S + + +PD +V LP K V++D+K++L AYERY + +D RE AL Sbjct: 203 KGREYTVQESFRMEDGTLKRPDFMVLLPGEKAVIVDSKVSLTAYERYCSLDDVARREQAL 262 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 +EH+ SVR HI L K+Y + G RTLD+V+M IPVEPA+ + PE++ E + N+ Sbjct: 263 REHVQSVRRHIAGLQEKEYSFIKGNRTLDFVIMCIPVEPAWQALMQADPEIVYELGRKNV 322 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 +L PTTL++ L+ IA LWR E ++RNA+ IA++A ++YD++ L ++ M + L Sbjct: 323 VLTGPTTLMITLKLIAQLWRREKENRNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVS 382 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 ++ AMK+L+ GRG++ ++ E R LG ++ +++ Sbjct: 383 QSFDLAMKRLTEGRGSLASKVEEIRRLGAKVSKQLP 418 >UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRU2_ACIBL Length = 459 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 126/455 (27%), Positives = 214/455 (47%), Gaps = 47/455 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAE-QLAEREEMVAELSAAKQQITQSEHWR 59 M I +V A+V AI + Q A A +AERE + A + AA + Sbjct: 1 MGSLIFAASVSAVVAFAITYFALRSQSAAAVARLSVAERELVTARMEAANKS-------- 52 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 S + L+ +L + ++A ++ AD+K+ ++ + + QFE LA Sbjct: 53 --------------SQASQLDRELAGLRATLDAEKKAADEKLAAVLQARDDMKAQFEALA 98 Query: 120 NRIFEHSNRRVDE------------------QNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + ++R + + +Q++ +L+ P+ E L F Q+Q Sbjct: 99 ASTLQANSRSFLDLAQTKLTDFQNQAKGDLNERQQAIENLVKPIHESLTKFDGQIQQIEK 158 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 + +L ++++ L Q N Q+ + L AL+ + +G WGE+ L RV E +G+ Sbjct: 159 SRNEAYGSLLNQLQTLTQSNDQLRVQTGALVTALRA-PQGRGRWGEIQLRRVAEMAGMIN 217 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQ 281 ++ Q + + ++PD++V+LP GK VV+DAK L AY A D R L+ Sbjct: 218 RCDFLEQEHLSTEDGG-LRPDMVVKLPGGKTVVVDAKTPLAAYLSALEATSDTERAEFLR 276 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 +H A VR HI+ LG K Y + + V+MF+P E F AL P LI + + ++ Sbjct: 277 QHAAQVRVHIKKLGAKSYWE-QFENAPEMVVMFLPNEAFFSAALAEDPTLIEAGVADKVI 335 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 + SPTTL+ LR + W+ + +RNA +++ LY+++ + +G LD A Sbjct: 336 IASPTTLIALLRAVHYGWQQQEIARNAVEVSQLGKDLYERLCTMVGYFEDVGGKLDGAVK 395 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 Y +A+ L S VL++A F L ++IK EI Sbjct: 396 AYNKAVSSLES---RVLSKARKFPDLAIQIKEEIP 427 >UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G5_9PORP Length = 447 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 146/449 (32%), Positives = 242/449 (53%), Gaps = 18/449 (4%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQIT-QSEHWR---AE 61 M+Y++IA + V F + + +RE+ AE+ A+ I+ Q E R E Sbjct: 1 MIYSLIAAIVVVFCLAFLLLREHRISLSIREKREQEQAEIVEARTLISVQKEEIRRVTEE 60 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 + + L+S +LE + + Q+ ++ ++ + + L QF+ +A + Sbjct: 61 SVQRQSALEQLRSEKENLEHEGYRWQIECQHLQRALEEAKQKNQDQAKELQLQFKEIATQ 120 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 I E ++ + +N ++L PLRE ++ ++V++++ E++ER L IR L Q + Sbjct: 121 IVEERSKTLGVRNEETL----RPLREDIERLGKRVEETYSAESRERILLQSTIRELMQQS 176 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN-------- 233 ++ E L +ALKGD+K QG+WGE++L +L++SGLR G EY Q ++ + Sbjct: 177 GTLSTETNALIKALKGDSKVQGDWGEMILENILQSSGLRRGEEYMVQETLRDEQGDVLHP 236 Query: 234 -DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 RS ++PDVIVR P G +VID+K++L AY RY AEDD R+ QEH+ SVR HI Sbjct: 237 AGERSALRPDVIVRYPNGGAMVIDSKVSLTAYSRYIAAEDDEERKHFAQEHLDSVRKHIA 296 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K Y + D+V++FIP +PA+ LAL + P L A K ++L++ T L+ L Sbjct: 297 ELSAKRYPEFI-TGAPDFVVLFIPNDPAYSLALTQDPALWETAYKKGVVLINGTNLIAVL 355 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 R ++W+ + Q +N ++I RAS +YDK + + + KA ++ R+A +LS Sbjct: 356 RMAQDMWQRDRQIKNVEEIVRRASTMYDKFCTYAATLVETEDKMVKATESLRKARGQLSE 415 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAE 441 GRGN + Q E R LGV+ + I + Sbjct: 416 GRGNFIHQMEQLRELGVKNTKNIPTSILP 444 >UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAS5_9RHOB Length = 472 Score = 338 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 141/433 (32%), Positives = 236/433 (54%), Gaps = 5/433 (1%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 A H + + R A A ++ + E R + + LQ + +L++ Sbjct: 44 ARRLHREAEQACGTARSTGAALEEAVRRLEAEMEAQRTAQKDQQAKHADLQEKHAALQSA 103 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + + A ++I ++ + + ++++FE+LA + +++ L+ LL Sbjct: 104 HAALQADSDGKLASARERIEELKSLREEMAKKFEDLAAATLRKTGSEFSATHQEKLSELL 163 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P RE + F ++++ +ER L+ ++R+L + + EA LTRALKGD + Q Sbjct: 164 KPFREHVSRFEVELREVHRSADKERAQLSQQVRDLTIQSETVRSEAAALTRALKGDKQKQ 223 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE++L R+LEASGL Y Q + +R +PDV+V+LP+ K ++ID+K++LV Sbjct: 224 GAWGEMILERILEASGLERDVHYMVQQQRTGEDGARYRPDVVVQLPRKKCLIIDSKVSLV 283 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 +YE NAE + R L+ H A+VR H+ L K Y L +DYVLMF+P+E A Sbjct: 284 SYEAAVNAETEEERAEHLKAHAAAVRRHVTQLADKAYYALED-TAVDYVLMFMPIEGALA 342 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL+ P+L + A+ +I L++PTTL+V LRT+ ++W E + NA+ IA RA +LYDK+ Sbjct: 343 AALNEAPDLASFAVSRHIGLMTPTTLMVTLRTVEHIWTVERRESNAEDIAKRAGRLYDKL 402 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 F+ D++ +G +L KA + +A+KKL+ GRGN ++Q E + +G + I D Sbjct: 403 ANFVGDLTKVGDALGKASQAHEEALKKLTHGRGNAISQVETLKQMGARATKSIAIDY--- 459 Query: 443 AVSQDEEYRLRSV 455 + DE RL + Sbjct: 460 -DADDEPARLPAA 471 >UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT8_UNCTG Length = 509 Score = 338 bits (866), Expect = 4e-91, Method: Composition-based stats. Identities = 144/430 (33%), Positives = 241/430 (56%), Gaps = 12/430 (2%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQ-----ITQSEHWRAECELLNNEVRSLQSINTSLEA 81 +QK L E E +AAK+Q E+ + ++ +L+ + Sbjct: 83 AKEQKIHDLMENIENQMRDNAAKEQKIHDLTKNIENLSKDNAAKEQKINNLKENIENQTQ 142 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 + E + Q+ ++ L +FEN+A ++ E N ++ + NR SL ++ Sbjct: 143 FSNNLKIEFENIASKNIENQTQLSSN---LKTEFENIALKVLEEKNAKITDLNRISLENI 199 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + P +E++D FR ++ + EA++ L E+ L +N ++ EA NL ALKGDNK Sbjct: 200 VFPFKEKIDEFRNKIDNLQTYEAEKMSGLQKELEKLISINNSVSAEAKNLANALKGDNKL 259 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 QG WGE+ L R+ E +G+ + YE+Q + D ++ PD IV+LP GK +VIDAK +L Sbjct: 260 QGTWGEMCLERIFEYAGMTKDVHYESQKQFKADDGKKI-PDYIVKLPDGKHIVIDAKTSL 318 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 VAYE+Y+N +++ ++++L+EH +SV+ HI L KDY LPGL +Y LMF+P++ A Sbjct: 319 VAYEKYYNTQNEDDKKNSLKEHSSSVKRHIDELATKDYISLPGLNQPEYALMFVPLDGAI 378 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 +ALD +P+LI A K NI +V+P+TLL L+TI +WR E+Q +N +IA + LYD Sbjct: 379 SIALDDKPDLIEYAFKKNIAIVTPSTLLATLKTIQYIWRQENQKKNVIEIAKQGGSLYDN 438 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG---NVLAQAEAFRGLGVEIKREINPD 438 F++ + + + +A+ ++A+K+LS+ +++A+A+ + LG K+EI D Sbjct: 439 FVTFVEVLREADKKISEAKSKTQEAIKRLSASDKKGNSLIAKAQRLKDLGSPTKKEIPED 498 Query: 439 LAEQAVSQDE 448 L + D Sbjct: 499 LLKNGDKNDA 508 >UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BID3_9PROT Length = 359 Score = 336 bits (861), Expect = 2e-90, Method: Composition-based stats. Identities = 139/318 (43%), Positives = 220/318 (69%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 +L +++ E + + +K+ M N+++ LS++F+ LAN+IFE +++ + Sbjct: 27 QEKNNLRLSYAVLSSSYEHEIRSSKEKLEIMQNAKEELSKEFKLLANQIFEDKSKKFNHT 86 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 +++ LL P REQ+ F Q ++ F EA+ERH L E+ L+++NAQ++QEA+NLT Sbjct: 87 HKEQFEMLLRPFREQITNFSTQSREQFSYEAKERHLLKDELVRLKEMNAQLSQEALNLTN 146 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 ALKG+NKTQGNWGE+VL R+LE SGLREG EY+TQ ++++ +PDVI+ +PQ +D+ Sbjct: 147 ALKGENKTQGNWGEIVLERILEESGLREGMEYKTQATLKSGDGKIYRPDVIIHMPQDRDI 206 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 +ID+K++LVAYER+ + E+ + AL+EHI+S+ HI+ L K+Y++L G+ TLD+VL+ Sbjct: 207 IIDSKVSLVAYERFMSQENPDAKALALKEHISSIAGHIKDLSSKEYERLEGVNTLDFVLL 266 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P+E AFLLAL+ E A +NI++VSP+TLLV LRTI ++WR + Q +A++IA+ Sbjct: 267 FMPIEGAFLLALEADGEFFKRAYDSNILVVSPSTLLVTLRTIEHIWRTQRQEEHAKKIAN 326 Query: 374 RASKLYDKMRLFIDDMSA 391 A +YDK+ LF+ Sbjct: 327 EAEAMYDKLVLFVKKYIK 344 >UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 Tax=Campylobacter concisus 13826 RepID=A7ZBP6_CAMC1 Length = 510 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 135/421 (32%), Positives = 238/421 (56%), Gaps = 8/421 (1%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 E EE+ ++ A+ + S + ++E +E++ L+ + + + +EA Sbjct: 94 ELRRLNEELGSQTKMAEMARSLSLNLQSELGAKEDELKRSNESENELKRAIVALKSEIEA 153 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 + + + + L+ +F NLAN+IFE + + +++SL LL+PL E++ F Sbjct: 154 KENILRSQEENLKKVKNELNLEFANLANKIFEEKSANFSKNSKESLELLLTPLGEKITSF 213 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 ++V D+ + L+ +++ + +L M++EA +L+ ALKG NK GNWGE+ L R Sbjct: 214 EKRVNDAHSDSQKSAGELSAQLKEVVELGKNMSKEANSLSTALKGSNKVLGNWGEMQLER 273 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 LEA+GL +G Y TQ S + + ++ PD ++ P K ++ID+K++L AYE+ A D Sbjct: 274 TLEAAGLEKGTHYATQESF-DASGKKLIPDFVINFPDDKQMIIDSKVSLHAYEKAVAAAD 332 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 + AL EHIAS++ HI L +KDY L +++ D+VLMF+PVEPAFL AL P L Sbjct: 333 LAQSKLALGEHIASIKKHIDELAKKDYSSL--VKSPDFVLMFVPVEPAFLEALKFDPNLF 390 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 + ++LVS TTL+ LR +ANLWR EH ++ A++I A+++Y+K + ++ + Sbjct: 391 NYGYEKKVVLVSHTTLMPLLRVVANLWRMEHGNKEAKEILKSANEIYEKFCTIAEKLNRL 450 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK----REINPDLAEQAVSQDE 448 G S+ DN+ + +K + SG+G + ++ E F+ + + K +E+ E ++ + Sbjct: 451 GNSVRSVNDNFNEVVKSV-SGQGGLDSRLEKFKKIALNPKDTQVKELEARPREILLASSK 509 Query: 449 E 449 E Sbjct: 510 E 510 >UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4C5_9BACT Length = 446 Score = 333 bits (853), Expect = 1e-89, Method: Composition-based stats. Identities = 151/475 (31%), Positives = 252/475 (53%), Gaps = 45/475 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAERE--EMVAELSAAKQQITQSEHW 58 M++ +++ A+I VG AIG AS + A + E E E + + A++++ Q Sbjct: 1 MEYLLIIAALI--VGGAIGAWTASRRFAGKVEENRREAETARVALAEAEAEKRLMQEGFR 58 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 R + L + R+ Q + + L + L E+F++L Sbjct: 59 REQELLAGQQERARQEQEKAWQTRL-------------------------ELLKEEFKSL 93 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 ++RIFE + ++ N++ L SLL+PL+E++ F+ V++S K + L + + Sbjct: 94 SDRIFEEKSGKLQSANKEQLESLLNPLKEKMTEFKTAVEESKVKGIELNTALNTRLSRMM 153 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR-- 236 + ++ EA NL ALKG KTQG+WGE++L +L+ SGL+ G YE Q ++ +D Sbjct: 154 EETLRIGSEAKNLADALKGGQKTQGDWGEMILEDILKRSGLKPGIHYECQATLRDDDGRT 213 Query: 237 ------SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 RM+PDV++ P GKDV++D+K++LVAY Y N++D+ +R++AL HI S+R H Sbjct: 214 VADPDHGRMRPDVVIHYPDGKDVIVDSKVSLVAYLDYMNSQDEESRKTALARHIRSIRTH 273 Query: 291 IRLLGRKDYQ---QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 I L +K+Y T+D+V+MFIP E + LA+ +P L EA K +M VSP+ Sbjct: 274 IDELAKKNYSARLNRSDRETVDFVIMFIPNEGPYQLAMISEPSLWAEAFKLKVMPVSPSN 333 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ L+ I W E QSRN ++I D A+++ +++ F + +G++LDKA+D Y A+ Sbjct: 334 LIALLQLIHTAWTREDQSRNQREILDTAAQMLERIYAFYEQFDEVGRTLDKARDVYDAAV 393 Query: 408 KKLSSGRGN--VLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 ++L G N V+ E R LGV++ + + +EE VP Sbjct: 394 RRLKHGERNRSVVLAGEKLRKLGVKMAK---ARQIPARLRPEEETGELPVPADEE 445 >UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAN1_CHIPD Length = 473 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 129/479 (26%), Positives = 243/479 (50%), Gaps = 26/479 (5%) Query: 1 MD-FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQI-TQSEHW 58 MD ++++A+I+ A+G + + Q +A E ++ L + TQ + Sbjct: 1 MDHLIVIIFALISCA--ALGAVIKVVIRSNQLKTSIAVLETQLSALHETAGGLRTQVQDK 58 Query: 59 RAECELLNNEVRSLQS----INTSLEADLREVTTRMEAAQQ---HADDKIRQMIN----- 106 ++E L+ ++ +Q I ++ EA RE R+ Q+ H+++K+++ N Sbjct: 59 QSEIGQLHTRLQIMQEETIRIESNGEARYREAENRLREQQEFIDHSNEKLKEAFNSISAE 118 Query: 107 SEQRLSEQFENLANRIFEHS---NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKE 163 + + + F LA + E + E+ +Q++++L+ PL E L F ++ Sbjct: 119 ALKHNNASFVALAKSVLETQVTDAKGDLEKRQQAIDALVKPLNETLHRFDENMRQLESNR 178 Query: 164 AQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGY 223 Q+ + I +QQ ++ +E NL ALK + +G +GE+ L RV+E +G+ E Sbjct: 179 QQQYGQINQFILGIQQSTEKLQKETHNLVSALKT-SHIRGRYGEIALRRVVEFAGMTEHC 237 Query: 224 EYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 ++ QVS+++D ++PD+I++LP+GK +++D+K+ L AY R F ED+ R+ L +H Sbjct: 238 DFNEQVSVQSDDGV-LRPDMIIKLPEGKTIIVDSKVPLSAYMRAFETEDEEERKVFLNQH 296 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 A+VR+H++ L K Y + DYV++++ +E +F AL P LI + ++N ++ Sbjct: 297 AAAVRDHLKKLSAKAYWS-QWQHSPDYVILYMQIESSFGAALQADPTLIEDGIRNKVVFA 355 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 +PTTL+ LRT+ +W+ H + N + I +LY++ + + + IG SL ++Y Sbjct: 356 TPTTLITLLRTVGFVWQQLHVAANIEDIRMAGIELYNRTNVLLRHFTNIGGSLKTVLNHY 415 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP-DLAEQAVSQDEEYRLRSVPEQPND 461 A+ L S + QA LG +K + E V + S+PE+ D Sbjct: 416 NDAVASLES---RFVPQARKLYSLGPALKHPLPDVKPIEAGVRYSALQQEESLPEEGED 471 >UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IPI4_RHOCS Length = 524 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 120/480 (25%), Positives = 216/480 (45%), Gaps = 45/480 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW-- 58 + V A++ V V + + + A LAER+ + +L A K + + + Sbjct: 10 LGIGAAVAAILVYVLVRLSVARSVLAAESRAAGLLAERDFALRQLEAMKDEAIERDRLII 69 Query: 59 -------------------RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 A L + L + + ++ EA +Q ++ Sbjct: 70 DLHDQQAELAAARASAETAAARVPDLERRLEDLAAELGLERQRVERLSMAEEALRQRLEE 129 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------------QNRQSLNSL 141 + +E R E F+ L++ +N+R E + +Q++ L Sbjct: 130 NRTLLSGAEARFRETFQALSHEALSANNQRFLELAQAQLEKVQESARGDLDRRQQAIGEL 189 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + P+RE+LD F + A L ++ +L + Q+ E NL RAL+ T Sbjct: 190 VGPVREKLDKFDSAIHQLEQARAGAYAELKTQVASLIETQGQLRSETANLVRALRS-PAT 248 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGE+ L RV+E +G+ + ++ QVS + + R++PD++VRLP GK +V+DAK L Sbjct: 249 RGRWGEIQLRRVVEMAGMLDHCDFHEQVSH-DAEQGRLRPDLLVRLPGGKTIVVDAKAPL 307 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 A+ DD R + + H +R+H++ LG K Y ++V++F+P E F Sbjct: 308 EAFLDAVGTTDDAMRAAHMARHARHIRDHMKALGEKRYWSQFEP-APEFVVLFLPGENFF 366 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL++ P LI + +++ +PTTL+ LR ++ WR E + NA++I+ ++YD+ Sbjct: 367 SAALEQDPALIEAGIDQSVIPATPTTLIALLRAVSYGWRQEKLAHNAREISVLGREMYDR 426 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + + + M +G+ L A + Y +A+ L S VL A F+ L +L Sbjct: 427 LGVMAEHMQRLGKGLGGAVECYNKAVSSLES---RVLVTARRFKELKATPDNAEMVELLP 483 >UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LW22_ACIC1 Length = 448 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 112/408 (27%), Positives = 199/408 (48%), Gaps = 24/408 (5%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 L + L+A ++EA ++ A +I ++++L E F L++ ++R Sbjct: 37 ARLAAATAELDATRAAAERQVEAERRAAAQQIESARLTQEQLREMFAALSSEALHRNSRA 96 Query: 130 V------------------DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 + +Q++ +LL+PLRE L +Q++ + A L Sbjct: 97 FVDLATETLKQITTAAEGDLAKRQQAIEALLAPLRESLAKVEQQIEQVEKERADAYGALR 156 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 ++ ++ + + Q+ E L +AL+ + +G WGE L RV+E +G+ E ++ Q + Sbjct: 157 QQVESMGKTSEQLRLETQQLVQALRA-PQARGAWGEYQLRRVVEFAGMLEHCDFVEQAT- 214 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 + +R++PD+IVRLP GK VV+DAK+ LV + A D TR+ ++ H +R HI Sbjct: 215 TDAEDARLRPDMIVRLPGGKHVVVDAKVPLVGFLDAMAASDPATRDEHVRRHARHLRQHI 274 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K Y T ++V++F+P E AL+ P+L+ A++ N+++ +PTTL++ Sbjct: 275 DHLASKAYWAAVP-NTPEFVVLFVPAEAFLSAALETDPDLLQYAMERNVIVATPTTLVLM 333 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LRT+A WR E + NAQQ+ D A LY ++ ++ +G+ L A +Y A+ L Sbjct: 334 LRTVAYTWRQEALAANAQQVLDLARSLYSRLATLGGHVNKLGERLGSAVRSYNDAVASLE 393 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 S VL A L V +P E + + L + ++ Sbjct: 394 S---RVLVTARRLADLKVTADDLESPRQVEVTPRRVQAAELVASADET 438 >UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DC11_9PROT Length = 415 Score = 331 bits (848), Expect = 5e-89, Method: Composition-based stats. Identities = 141/436 (32%), Positives = 240/436 (55%), Gaps = 24/436 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M + LVG+ + + QL +E L E + Sbjct: 1 MKEIYTLIIFSILVGLIFILWIIEKRKNKILQNQLNYLKEENNFLK------INLEDKKN 54 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E + L L +D ++++ + ++ + ++ ++++L +FE LAN Sbjct: 55 ELSNIQKRYDELMQEYIILNSDFSALSSKFQEKEKFYKE----LLENKEKLKNEFEVLAN 110 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 IF+ + +N ++++ +L P+ +Q+ F ++ K+ + L +E++NL++L Sbjct: 111 SIFD----KFSIKNEENISKILDPISKQVKDFEEKIIYLKEKDIE----LMNELKNLKEL 162 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 N +++ EA NLT+ALKGD K QG WGE++L RVLE SGLR+ E+ + S+ + Sbjct: 163 NYKLSVEAENLTKALKGDKKIQGIWGEMILERVLEMSGLRKDKEFIREKSLIC-NGEVFR 221 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVIV+LP + ++IDAK +L AY Y ED +S L+EHI +++NHI L K+Y+ Sbjct: 222 PDVIVKLPNNRYIIIDAKTSLNAYSEYIKTED----KSYLKEHIKAIKNHIDKLASKNYE 277 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 L G+ TLD++ MFIP+E A +AL+ L A K ++L +P+TLLV+LR+I +WR Sbjct: 278 NLDGINTLDFIFMFIPIENALKVALEYDSTLYEYAFKKRVILTTPSTLLVSLRSIEAIWR 337 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 +E Q+ N +++ A +Y+KMRLF++D I +S++ + Y A KL SGRGN++ Sbjct: 338 FERQNENIKEVIKLADNIYNKMRLFLEDFEKIDRSIEYTKKYYLNAKNKLISGRGNLIDL 397 Query: 421 AEAFRGL-GVEIKREI 435 E + G++ K+E+ Sbjct: 398 LENMKEKAGIKPKKEL 413 >UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVZ2_HALNC Length = 531 Score = 330 bits (847), Expect = 5e-89, Method: Composition-based stats. Identities = 127/467 (27%), Positives = 221/467 (47%), Gaps = 27/467 (5%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR-AECELLNNEVRSLQSINTSLE 80 A+ Q + E A LSA Q+++ + R +E + + L + Sbjct: 71 LAARQAQRDLTAASTELARTQATLSALSDQLSRMQAERMSERQQSEQRIDVLSRQVQTQA 130 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE-------- 132 A+ E+ R+ ++ A +K+ + ++ +L + F+ L+ +N + Sbjct: 131 AEQAELQERLAQERRAAAEKLALIDQAQVQLQQAFQALSADALRANNESFLKLAEENLAR 190 Query: 133 ----------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 + ++++ + P+RE+L+ F ++ + +I +L Q++ Sbjct: 191 FQAGAAQDLNKRQEAIVQMTQPIRERLEQFDVKLNSLEQARTNAYGAMNQQINDLLQIHL 250 Query: 183 -QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ +E +L RAL+ +T+G WGEV L RV+E +G+ E ++E QVS ++D R++P Sbjct: 251 PKLHRETADLVRALR-QPQTRGRWGEVQLKRVVELAGMLEHCDFEEQVS-QSDTGGRLRP 308 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D+IV LP G+ VV+DAK L AY + A D R +ALQ+H VR HI L +K+Y Sbjct: 309 DMIVHLPGGRQVVVDAKAPLNAYLQAMEAPSDEARAAALQDHARQVRTHISQLSKKEYFD 368 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 T ++V++F+P E F AL + P LI + ++ SPTTL+ L+ ++ WR Sbjct: 369 QFSP-TPEFVVLFVPGEVFFSAALMQDPTLIEFGAEKRVIPASPTTLIALLKAVSYGWRQ 427 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E ++NAQ++A+ LY++M +G+ LD+A + Q++ L G VL A Sbjct: 428 EALAKNAQEMAELGRDLYERMGTLAQHWQKVGKHLDQAVGAFNQSVGSLE---GRVLPTA 484 Query: 422 EAFRGLG-VEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRD 467 FR LG V +E P L Q+D Sbjct: 485 RKFRELGAVRSDKEDLPSLTPLTTETRPLTAQELTGPDSAAAITQKD 531 >UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family n=2 Tax=Leptospirillum sp. Group II RepID=A3EVG7_9BACT Length = 477 Score = 330 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 126/489 (25%), Positives = 219/489 (44%), Gaps = 44/489 (8%) Query: 3 FSIMVYAVIALVGVAI-GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE 61 + +I L + G+L AS + ++ RE++ + + + E E Sbjct: 1 MTPFEGILIGLAAGGLSGYLIASARFGRRSQTL---REDLAVKDALLLEHRQAIERLGLE 57 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 + L ++ S +++ EA R+EA ++ +K + +S ++L+E F+ L+ Sbjct: 58 KKQLRTQLEEAISRHSAAEA-------RLEALEKADREKQALLEDSRKKLAETFQALSLE 110 Query: 122 IFEHSNRRVDEQNRQSL------------------NSLLSPLREQLDGFRRQVQDSFGKE 163 + ++R E +Q+L + L+ P+ E L R +QD G+ Sbjct: 111 ALQQNSRSFLELAQQNLAGFQGQAKGDLELRQAKIDELVKPIGESLAKVERTLQDLEGER 170 Query: 164 AQERHTLTHEIRNLQQLN-AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 +L +R+L + + ++ E + L RAL+ +G WGE+ L RV+E +G+ + Sbjct: 171 KSAYSSLNEMVRSLVENHIPRLHTETMGLVRALRQPV-VRGRWGEIQLRRVVEMAGMLDH 229 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 ++ Q + + R++PD++VRLP K VV+DAK+ L AY + + R L E Sbjct: 230 CDFFEQQT-STQSDERLRPDLVVRLPGNKQVVVDAKVPLSAYLEAAEMDSEEGRAQKLAE 288 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H VR HI LGRK Y + ++V++F+P E + AL P LI + ++ Sbjct: 289 HARQVRQHISQLGRKSYWEQFQP-APEFVILFLPGEVFYSSALQADPALIEYGVSERVIP 347 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 +PTTL+ LR +A W+ E +RNAQ+I LY ++ +G+SL A ++ Sbjct: 348 ATPTTLIALLRAVAYGWQQETITRNAQEINKLGRDLYKRLSDLTGHWLKVGRSLGNAVES 407 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 Y +A L VL A + L + EI + D R S+ E Sbjct: 408 YNKATGSLE---HRVLVTARQLKDLRSGSEDEIPTP-----DAIDSRPRPVSLLGDSGSE 459 Query: 463 AY---QRDD 468 DD Sbjct: 460 PVFSSPEDD 468 >UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SN95_STRM5 Length = 612 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 146/448 (32%), Positives = 257/448 (57%), Gaps = 9/448 (2%) Query: 25 YQHAQQKAEQLAEREEMVAELS-AAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 + +QLA ++ + + ++ Q + +A+ + +LQ+ + ++ Sbjct: 160 QRERDTLKDQLANQDALAKVAAIGEREAREQLQGLKAQQVVAAERYETLQARFAAQSSEY 219 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 ++ T ++ + ++ + LSEQF+ L+N I E + + E ++ SL+++++ Sbjct: 220 TKLKTELDEREASHARELANFEQQKASLSEQFKLLSNEILEAKAQALQESSKLSLSAVMT 279 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P ++ ++ F+ +V+ +E ++ L E+ L+ LN Q+ EA L+ AL+G K QG Sbjct: 280 PFQQSIETFKLEVRQIHHRETTQQGELRKELEQLKALNQQITAEAHELSTALRGQKKLQG 339 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGE+VL VL+ SGL+ +Y+ +VSI + R +PD +V LPQG+ ++IDAK++L A Sbjct: 340 NWGELVLENVLDRSGLQLDKDYQREVSITTEEGRR-RPDAVVYLPQGRHLIIDAKVSLNA 398 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y RY NAEDD R+ AL+EH+ +V + I+ L +DY +LPGL + D V MFIP+E AF+ Sbjct: 399 YARYVNAEDDLERKQALKEHVQAVASRIKELADRDYYKLPGLNSPDMVFMFIPIESAFVE 458 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 AL L +A++NN+++ +PTTLL +L + LWRYE Q+++ +A+RA ++ K+ Sbjct: 459 ALKADETLFQQAIENNVLVATPTTLLTSLNIVRQLWRYEDQNKHTAALANRAEGVFRKLN 518 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F+ I + L+ A + Y +A +L SG+GN++ Q F+ L IK ++ A++A Sbjct: 519 SFLASFERIKKGLESATEAYTKAEGQLVSGKGNLVKQVGEFKNLAPAIKAQLPAYFADKA 578 Query: 444 VSQDEEYRLRSVPEQPNDEAYQR--DDE 469 + +P + + EA R DDE Sbjct: 579 A-----LEIDFIPSEQSIEALNRAADDE 601 >UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinomycetales RepID=D1A8I3_THECD Length = 501 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 110/381 (28%), Positives = 187/381 (49%), Gaps = 24/381 (6%) Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------- 132 TTR A Q+ EQRLSE FE+L+ + + SNRR E Sbjct: 24 ATTRQAVLVARAKAAEEQLSRLEQRLSEHFESLSAKALDASNRRFLELADARLRAAGAEA 83 Query: 133 -----QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + +Q++ L++PLRE L+ Q+++ + L ++ +++ + ++ E Sbjct: 84 AGELERRKQAVEHLVAPLRETLEKVAEQLREVETGRRESHAMLAKQVEFVRRSSEELRAE 143 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 L RAL+ + +G WGE+ L RV+E +G+ +++ QV+ + ++PD++VRL Sbjct: 144 TQALARALQR-PEARGRWGELQLRRVVELAGMMRHCDFDEQVT-GHGDDGALRPDLVVRL 201 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 GK +V+DAK+ L AY +D R + LQ H +R+H+ L K Y + Sbjct: 202 VGGKTIVVDAKVPLSAYLEAAATDDPKLRTARLQAHARQLRDHVDHLASKAYWRAFSP-A 260 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V++FIP E AL+ PEL+ AL + + +PTTL+ LRT+A W+ E SRN Sbjct: 261 PEFVVLFIPGEAFLAPALEHSPELLEYALSRRVHIATPTTLVSMLRTVAYAWQQEALSRN 320 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+ + + +LY+++ + +G+SL A +Y +A+ L S VL A L Sbjct: 321 ARTVFELGRQLYERLGTLGGHIDELGRSLSGAVRSYNRAVGSLES---RVLVSARRMNEL 377 Query: 428 GVEIKREINPDLAEQAVSQDE 448 G+ + P + Sbjct: 378 GLVDEPLRAPRPVTDSPRAPS 398 >UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID=B6BEX3_9RHOB Length = 458 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 107/421 (25%), Positives = 206/421 (48%), Gaps = 24/421 (5%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD 98 ++ + + I A L +E+ +L+ + + + + +++A + Sbjct: 30 RQLEQVNADLRSHIAGLTAEVARLPELADELATLRRTSENERSARYQAEAQVQALKAEHW 89 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------------QNRQSLNS 140 ++ ++ + Q++ +F +LAN + + ++ + ++ S Sbjct: 90 ARLEELHHMNQQMEHKFTSLANGVLKQNSESFLSLVSERFQAHCKTADADLAKRHAAIES 149 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 L+ PL +L F ++++ + + ++++L + A + E L +AL+ K Sbjct: 150 LVKPLDHKLGQFGERIKEIEQARNEAYGAIQAQVKHLAEGQAMLGGETRKLVQALRA-PK 208 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 T+G WGE+ L +V E +G+ E +YE + S+ D R +PD +VR+P GK +V+DAK Sbjct: 209 TRGRWGEMQLRQVFEMAGMTEHVDYELEKSVGTDDGLR-RPDAVVRIPGGKSIVVDAKTP 267 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY A+ +++AL H V+ H+R L K YQ T D+V+MFIP E Sbjct: 268 LEAYLDALEADTPEQQQAALARHANHVKTHVRQLSSKSYQSTLA-ETPDFVVMFIPGETF 326 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 A + P LI A +N +++ +PTTL+ +++IA W+ E + NA ++ A +LYD Sbjct: 327 VSAAAEADPGLIEYAFENKVLIATPTTLMALVKSIAYGWQQEKMAENAVEVQKTAKELYD 386 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 ++ F +++++G+SL + +NY +A+ L + VL A F +GV D Sbjct: 387 RLATFSKNLASVGRSLSSSVNNYNKAVGSLEA---RVLPSARRFEAMGVVANGAELEDPG 443 Query: 441 E 441 + Sbjct: 444 Q 444 >UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Tax=Bacteria RepID=B7JBD7_ACIF2 Length = 486 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 116/429 (27%), Positives = 199/429 (46%), Gaps = 25/429 (5%) Query: 28 AQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVT 87 QQ EQ +AA+ + + LQ+ N+++ L E+ Sbjct: 34 RQQAREQQEILRHESESRAAAEAESRRIPALENALVAERGNTARLQTENSAIRGQLAELG 93 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN-------- 139 R+E + +K+ + ++ QRL + F++L+ +N+ E R++L Sbjct: 94 ERLEQERLRGTEKLALLEDARQRLGDAFQSLSAEALRRNNQSFLELARENLERFQESAKT 153 Query: 140 ----------SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA-QMAQEA 188 L+ P+RE L+ ++ L +IR L Q + ++ QE Sbjct: 154 DWEGRQKAVGQLVEPIRESLEKVGTRIDAMEKTRIDAYGALNEQIRGLVQDHLPRLHQET 213 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 L +AL+ +G WGE+ L RV+E +G+ ++ Q + D+ + +PD++VRLP Sbjct: 214 AALVKALR-QPAARGRWGEMQLKRVVEMAGMLAYCDFTEQEGVNTDSG-QQRPDLLVRLP 271 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 GK +V+DAK L AY +D+ R L +H + +R H+ L +K Y + T Sbjct: 272 GGKRIVVDAKAPLSAYLEAMETDDEQKRAHFLHKHASELRTHMTQLSKKSYWEQFQP-TP 330 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V++F+P E F AL P LI ++ +++ SPTTL+ LR +A WR E + NA Sbjct: 331 EFVVLFVPGEVFFSAALQEDPSLIEYGVEQKVIVASPTTLIALLRAVAYGWRQESLAENA 390 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + I+D +LYD++ + + +G+ L +A + Y A L S VL A FR L Sbjct: 391 RAISDLGKELYDRISILAGHWARVGKGLGQAVEAYNSATGSLES---RVLVSARKFRDLK 447 Query: 429 VEIKREINP 437 + P Sbjct: 448 ATPEARELP 456 >UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Zymomonas mobilis RepID=RMUC_ZYMMO Length = 448 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 129/454 (28%), Positives = 226/454 (49%), Gaps = 38/454 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHA----QQKAEQLAEREEMVAELSAAKQQITQSE 56 + F ++ +I + G+ + W + A Q + + A+ EE + A +Q + E Sbjct: 5 LPFLAFLFGLI-IAGLPLLWYIRQQKTALDGLQARVLEGAKAEEQARRIPALEQAV---E 60 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 WR + LL E Q+ N E E ++ +I Q+ +E LS++F+ Sbjct: 61 SWREKASLLMAE----QAANKRGE----------EEREKAYRQQIEQLKATEDALSQKFD 106 Query: 117 NLANRIFEHSNRRVDEQNR-----------QSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 +LA + E ++ + EQ + L LL P+++ L + V+++ Sbjct: 107 SLAAKTLEKAHGQFLEQAQMRFAKSEREGEAKLELLLQPVKDSLKRYEASVKEAEQLRQT 166 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 E +LT + +++ + EA L AL+ K +G WGE L VLE+ GL E ++ Sbjct: 167 EYGSLTALVSTMREGQEAVKNEANKLVNALRTAPKARGCWGEQQLRNVLESCGLSEYVDF 226 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 ET+VS+ ++ R++PD I+R+P G +V+D+K++L AY+ ++A D+ R+ LQ H Sbjct: 227 ETEVSVNSEKG-RLRPDAIIRIPNGSILVVDSKVSLNAYQDAYDAVDEDKRQLYLQAHSK 285 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +++ HI L +K+Y DYV+MFIP E AL++ L A + ++L +P Sbjct: 286 AIKAHIDGLSQKNYWDQFK-EAPDYVIMFIPGEHFLSAALEQDHNLWEYAFQKRVLLATP 344 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 T L+ RT+A +WR E + NA++I + +LY+++ M A+G SL+ + NY + Sbjct: 345 TNLIAIARTVAAVWRQEDIAHNARKIGELGKELYERIAKVDAHMRALGNSLENSVKNYNK 404 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 + S VL A FR L +E K + + Sbjct: 405 FVGSFES---RVLVTARKFRELNIETKEQEIKEA 435 >UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=C6V407_NEORI Length = 408 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 142/388 (36%), Positives = 235/388 (60%), Gaps = 9/388 (2%) Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 ++ S E E L+ +R L S + S+ L E + + + + + S++ Sbjct: 23 KVRTSTILENEQEKLDKALREL-SESESICKKLEEENSDLMRRVVQLESEKKSFEYSQRA 81 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 + +FE LA++I E S R+ EQ+ + LL PL+ ++ F +++++SF + +ER++L Sbjct: 82 MYAEFETLASKILEGSAVRLKEQSINDIGGLLEPLKLKITEFEKRIEESFHADIKERYSL 141 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 EI + +M +EA L R+L+GD+KTQG+WGE+VL+++LE SGL++G +Y Q Sbjct: 142 AKEIARMASQTDRMIEEANKLGRSLRGDSKTQGSWGELVLSKILECSGLQKGRDYMLQQK 201 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 +END PDVI+ LP GK +V+DAK L Y+ Y N + + L+ + SVRNH Sbjct: 202 LENDT----IPDVIINLPDGKHLVVDAKTPLKHYDLYINTHE----KGHLENFLKSVRNH 253 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 ++ L K+Y L T +V MF+PVE A+ LAL EL AL++ +M+VSP +L+ Sbjct: 254 VKNLSGKEYHSAQELFTPGFVFMFVPVESAYALALSTDLELKELALRSRVMIVSPNSLVA 313 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L+ ++++W+ Q++NA +IA +A +YDK LF+D+++ IG S+ + YR AM KL Sbjct: 314 MLQAVSSVWKIVDQNKNANEIAKKAGAMYDKFVLFVDELAKIGHSIANSDRLYRSAMNKL 373 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPD 438 GRG++L++AE +G+G++ +EIN D Sbjct: 374 RDGRGSLLSRAEDLKGMGIQANKEINED 401 >UniRef50_Q0S487 Possible DNA recombination protein, RmuC family protein n=2 Tax=Actinomycetales RepID=Q0S487_RHOSR Length = 452 Score = 320 bits (820), Expect = 7e-86, Method: Composition-based stats. Identities = 88/308 (28%), Positives = 148/308 (48%), Gaps = 10/308 (3%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 + E S RR + ++ L+ PL E + QV L+ ++ + + + Sbjct: 121 VSEDSARRHSGAIGEQISRLVGPLHEAVGALAEQVDHVERNRVHAYAGLSEQVEGMHRTS 180 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ + L AL+ + +G WGE+ L RV+E +G+ +++TQVS + ++P Sbjct: 181 QMLSTQTNRLVTALRA-PQIRGRWGEIQLERVVELAGMVRHCDFDTQVS-----KDGVRP 234 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D++V L GK +V+DAK+ AY ED RE L H +R H+ L K Y + Sbjct: 235 DLLVYLAGGKQIVVDAKVPFAAYLDAAQTEDPTAREQHLIRHARQLRTHVDQLADKTYWE 294 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 T ++V++F+P +P AL L+ A N++L +PTTL+ LRTIA+ WR Sbjct: 295 SFDP-TPEFVVLFVPGDPFLDAALIADSGLLEHAFSRNVILATPTTLIALLRTIAHTWRQ 353 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E S++A +I +LY ++ + +G L KA D++ + + S V A Sbjct: 354 EALSQDAAKIHQLGRELYSRLGTVGAHLDRLGSQLGKAVDSFNLTVASMES---RVTVTA 410 Query: 422 EAFRGLGV 429 L V Sbjct: 411 RKLHDLDV 418 >UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C4V2_HYPNA Length = 445 Score = 320 bits (820), Expect = 8e-86, Method: Composition-based stats. Identities = 116/455 (25%), Positives = 218/455 (47%), Gaps = 30/455 (6%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 M++ + L+ V +G + ER+ ++AE A+ ++ Sbjct: 14 MIHVGLLLIAVGLGIYLWQARQGGA-----LERQRLLAERDGAQDEVA------------ 56 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 L+ +L+A R+ ++ AA+ + + R+ Q + + + E Sbjct: 57 -----RLRQREQTLDAVARDAQLKLAAAEARSAEDERKFGELAQGVLARANTMFLERAEE 111 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + +R E + L L+ P+ E + FR++V+ +++ L+ +++ + + + Sbjct: 112 TFKRHREGAQGELKELMKPIGENFETFRQKVEALEKVRIEDKSLLSEQVKAIGESLHRNT 171 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 E L AL K G WGE+ L V+E +GL ++ QV ++ R +PD I+ Sbjct: 172 AETGKLVNALTA-PKGGGRWGEMTLRNVMEQAGLSAHCDFSEQVH-DDTEEGRQRPDAII 229 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP + +VID+K++L +Y N +D R + L++H SV+ H+ L KDYQ G Sbjct: 230 RLPGDRQIVIDSKVSLASYMAATNTDDPAERLAHLKQHATSVQRHVTTLASKDYQSNLGN 289 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 R DY+ MFIP E F AL++ P+LI +A+ ++++ +PTTL+ RT+A+LWR + Sbjct: 290 R-FDYIAMFIPGENFFAAALEQAPDLIEKAMSRSVIVTTPTTLIALARTVAHLWRQHEMN 348 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 NAQ A+ ++LY +M + + +G+S++ + D+Y + L VL F Sbjct: 349 ENAQAAAELGAELYTRMGVLLGHTEKLGKSINSSVDHYNSLLGSLD---KRVLPTLRKFE 405 Query: 426 GLGVEIKREINPD--LAEQAVSQDEEYRLRSVPEQ 458 + + ++ P+ L E + + +L P + Sbjct: 406 DMKIAPPGKVPPEAKLIEARANTPDTGQLPLEPPR 440 >UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTJ9_9GAMM Length = 507 Score = 320 bits (819), Expect = 1e-85, Method: Composition-based stats. Identities = 113/463 (24%), Positives = 206/463 (44%), Gaps = 35/463 (7%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + + A+ E + + + Q R E E L + + + L E Sbjct: 56 RQQDRIAQLERELRAEALAGAELRAENRQIAELRREQEKLREALELGRQDIGQRDRRLAE 115 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD-------------- 131 + R+ ++ A+ ++ + + + + FE L+ +N+ Sbjct: 116 LEERLLQERRQAEARVASLEEAREHFRQLFEALSAEALRRNNQSFLTLAQEKLAGFQESA 175 Query: 132 ----EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA-QMAQ 186 EQ + SL L+ P++E L ++ +L ++R L Q + ++ Q Sbjct: 176 KGDWEQRQASLQQLVQPIQESLGKVGERLDLLERARIDAYSSLNEQLRALVQDHLPRLHQ 235 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE-NDARSRMQPDVIV 245 E +L +AL+ +G WGE+ L RV+E +G+ ++ Q S+ N +PD+IV Sbjct: 236 ETASLVKALR-QPAARGRWGELQLRRVVEMAGMLAHCDFVEQESLGGNGEVGIQRPDLIV 294 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP GK + +DAK L AY + A ++ + L++H A ++ H+ LG+K Y + + Sbjct: 295 RLPGGKQIAVDAKAPLNAYLQAVEAMEEGDKALWLKKHAAELKTHMGQLGKKVYWERL-V 353 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 T ++V++F+P E F AL P L+ ++ +++ +PTTL+ LR +A WR E + Sbjct: 354 PTPEFVVLFLPGEDLFSAALQADPGLLEYGVEQKVIVATPTTLIALLRAVAYGWRQESLA 413 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 NAQ I+ +LYD++ + + +G+ L +A Y +A L S VL A FR Sbjct: 414 ENAQAISALGKELYDRLGTLAEHWARVGKGLGQAVQAYNRATGSLES---RVLVTARRFR 470 Query: 426 GLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 L +E A + + S+P P + + Sbjct: 471 DL----------QASEAAKELETLEPVDSIPRHPPEGLVDSSE 503 >UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadales RepID=Q2NCT1_ERYLH Length = 485 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 122/436 (27%), Positives = 209/436 (47%), Gaps = 17/436 (3%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHA 97 R + AK+ E +++ R ++ +L+ E+T ++A Sbjct: 56 RARFDERDAEAKKYADDVARMAPELATMSDRARRADALAETLDHTREELTA-LKAQAAGF 114 Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRV-----------DEQNRQSLNSLLSPLR 146 ++ R + S ++L ++FEN ++ + ++ + + L +LL P+ Sbjct: 115 AEQKRLLEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEKASAEKLAALLKPVD 174 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 E+L + QV+ + L I N+Q+ ++ +EA L +L K +G WG Sbjct: 175 ERLKKYEEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWG 234 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E L VLE GL E ++ + S++ ++ R++PD IV +P K +VIDAK++L AY+ Sbjct: 235 ERALQNVLEQCGLAEHTDFHLEQSMDTESG-RLRPDAIVNVPGQKKLVIDAKVSLNAYQE 293 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 F A+DD R+ L H S+RNH++ LG K YQ DYV+MF+P E AL+ Sbjct: 294 AFEADDDDARKRHLDLHAKSMRNHVQTLGSKGYQN-QFEEAPDYVVMFVPGEHFVAAALE 352 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 PEL A N ++L +PT L+ RT+A +WR + + AQ+I ++LYD++R+ Sbjct: 353 HDPELWDFAFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRMGAELYDRLRVAG 412 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + M +G L+ A NY + + S NVL G+EI +EI + + Sbjct: 413 EHMKRVGGGLETAVANYNKFVG---SFERNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPR 469 Query: 447 DEEYRLRSVPEQPNDE 462 + L + + E Sbjct: 470 YTDDDLLTDGSEEAAE 485 >UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULX8_AKKM8 Length = 417 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 101/391 (25%), Positives = 198/391 (50%), Gaps = 31/391 (7%) Query: 82 DLREVTTRMEAA----QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD------ 131 R+ + R+EA Q+ A+D+ + + +E+ L + F ++ + +S ++ Sbjct: 27 RYRDRSVRLEAESRSWQERAEDRTQMLRRAEEVLKDSFAGISAEVLRNSEKQFLNLAETR 86 Query: 132 ------------EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + +Q++ S+L P+ E L + ++ + + L +IR + Sbjct: 87 LQSQRQQANHDLDSRKQAIESMLKPVSESLKLVQSRLGEMEKERVGAYTDLKTQIRYILS 146 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 N + E L++AL ++ +G WGE+ L RV+E +G+ E ++ TQ + + R+ Sbjct: 147 GNEALKNETARLSQALHHNS-VRGQWGELQLRRVVELAGMVEYCDFTTQETRSREE-ERV 204 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PD+++ LP G+ ++IDAK + +Y E+ R + H A V+ H++ L K+Y Sbjct: 205 RPDMVIHLPGGRSIIIDAKAPMASYLNAGQTENPEERSQWMARHAADVKRHLQQLSAKNY 264 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 + ++V+MF+P E F AL+ P LI +N ++L +P+TL+ L+ +A W Sbjct: 265 -FAQFSQCPEFVIMFLPGESFFQAALEADPSLIEFGAENKVILSTPSTLIALLKAVAYGW 323 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E + NA++I++ + LY+ + S++G+SL++A Y + + SS + Sbjct: 324 KQEQLADNAKKISEAGADLYNTCSILSGHFSSLGKSLNQAVAQYNKTV---SSFEHRFIP 380 Query: 420 QAEAFRGLGVEIKREIN---PDLAEQAVSQD 447 +A+ + LGV +E+ D+ EQA S D Sbjct: 381 RAQKLKNLGVTSTKELPRSLEDITEQAKSAD 411 >UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQ43_HIRBI Length = 516 Score = 318 bits (816), Expect = 2e-85, Method: Composition-based stats. Identities = 118/422 (27%), Positives = 209/422 (49%), Gaps = 10/422 (2%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 E+L + + A+ A+Q TQ E +R E L+ ++ L++ E M++ Sbjct: 84 EKLRFEQSLNAQQEKAEQYQTQLEKYRTHAEALSRKLAGLEAGQEEREKAFEVERATMKS 143 Query: 93 AQQHADDKIRQMINSEQRLSE-QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 K + + ++ R S+ QF +AN R+ E ++ L+S++ P++E Sbjct: 144 LNAEIHQKFQHLADNALRQSQKQFLEIAN----EQMRQHKEVSKADLSSMIGPIKESFSQ 199 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLT 211 F ++V++ +++R +L EI L Q A L AL K+ G WGE L Sbjct: 200 FSKKVENLEQVRSEDRASLRTEIEKLSQTMADTQNVTGKLANALSA-PKSGGRWGEETLR 258 Query: 212 RVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAE 271 VLE +GL E ++ QV + ++PDV+VR+P G+ +VID+K+++ + + Sbjct: 259 NVLEMAGLSEHADFSEQVHANVEDGQNIRPDVVVRMPGGRHLVIDSKVSVDDFLQASEES 318 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 D + LQ H +++H+ +L RK Y T+D+V MF+P E + AL +L Sbjct: 319 DPQRQNLLLQTHARKMKDHVTVLARKAYW-AQLPDTVDFVAMFVPGENFYAAALSADRDL 377 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSA 391 A +N +++V+P+TL+ + +A WR E+ ++N +++ + A +LY ++ + D + Sbjct: 378 FDYAARNKVIIVTPSTLVALAKAVAFGWRQENAAQNTKEVTELARELYSRIAVMGDKVVK 437 Query: 392 IGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 +G+ L+ A Y + + L + VL QA F LGV + PDL E E R Sbjct: 438 MGRGLNTASAAYNELVGTLET---KVLPQARKFDALGVSADGKEIPDLEEIEDHMREPRR 494 Query: 452 LR 453 R Sbjct: 495 GR 496 >UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1AWD8_RUTMC Length = 378 Score = 318 bits (814), Expect = 4e-85, Method: Composition-based stats. Identities = 135/372 (36%), Positives = 243/372 (65%), Gaps = 14/372 (3%) Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 LN +++L+S LE L E + +++I + ++ ++S+ F+ +A I Sbjct: 21 LNARLQTLKSDKIRLEVCLDE-------KIKSYENQIDLINIAKVQISKDFKAIAGDILV 73 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 + + +N + LL+PL+ QL FR +++ ++ +ER TL+ +I NL++ + ++ Sbjct: 74 KNRYDLSIKNSE----LLTPLQVQLKEFRDKIETITSEQIKERATLSVQIENLKKTSIEI 129 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 + NLT AL DNK QG+WGE++L+ +L +SGLREGYE++ Q +N++ ++PDV+ Sbjct: 130 QETTQNLTNALTYDNKQQGDWGEMILSSILSSSGLREGYEFDVQKQFKNESGEILKPDVV 189 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 + LP+ KD+++D+K++L AY Y + + + L+ H+AS+ HI + K+Y+ L Sbjct: 190 LHLPEEKDIIVDSKVSLKAYNDYI---TNQSNKQLLKAHVASIEAHINGISIKEYENLQD 246 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + TLD++ +FIP+E A L+AL+++P L T ALK NI+LVSP+TL+++L+T+ ++W+ E Q Sbjct: 247 VLTLDFIFVFIPIESALLIALEKKPGLFTMALKKNIVLVSPSTLMMSLKTVHHIWQTERQ 306 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 ++N+++IA +A +YDK+ FI M I + LDKA +Y++A KLS G+GN++ +A+ Sbjct: 307 NQNSEEIARQAGAMYDKLFGFIQSMDDIEKHLDKASKSYKKARAKLSDGKGNLIGRAKKL 366 Query: 425 RGLGVEIKREIN 436 + LGV+ K+++N Sbjct: 367 KELGVQSKKKLN 378 >UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GRF8_SPHAL Length = 451 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 215/453 (47%), Gaps = 36/453 (7%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL 79 WLFA A+Q +AER+ + +A + R ++ Sbjct: 21 WLFA----ARQSGALMAERDGLAERFRSAVTDLAAETEARQAADI--------------- 61 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR---- 135 L + EA + ++RQ+ +++ L+ QF + + + + E+ Sbjct: 62 --RLAALRAEQEAREAAHAAQVRQLQDAQAALTAQFREVGQAMLGEAQKEFLERAEARFR 119 Query: 136 -------QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 Q L +LL P+ E+L+ + V+ + L +I +++ + +++ EA Sbjct: 120 QSEESAGQHLKALLQPVHERLEKYETAVKKVETERQSAFGMLQGQIESMRAQSERVSSEA 179 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 L AL+ K +G WGE L VLE+ GL E +++T+VS+ + R++PDV+V++P Sbjct: 180 AKLVNALRNAPKARGRWGEQQLRNVLESCGLSEHADFQTEVSVADGDGGRLRPDVVVKVP 239 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 G+ +VIDAK++L AY+ F A D+ + + L H A+++ H+ LG K Y T Sbjct: 240 GGQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLAAHAAAMKAHVNALGAKAYWNQFD-DTP 298 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+V+MF+P E ALD EL A + ++L +PT L+ RT+A +WR E + A Sbjct: 299 DFVVMFVPGEHFLAAALDHDHELWDYAFERKVLLATPTNLIAIARTVAAVWRQEKLANQA 358 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 ++IA +LY +M + ++ +G++LD+A Y + S VL QA+ F L Sbjct: 359 REIAMLGKELYARMSVMGSHIARVGKNLDQATGAYNAFVGSFES---QVLTQAKRFEALD 415 Query: 429 VEIKREINPDLAEQAVSQDEEYRLRSVPEQPND 461 +E P L + +L + P ND Sbjct: 416 IETGGREIPTLPVAEQAARPLAKLAAAPSAVND 448 >UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKR8_SANKS Length = 434 Score = 317 bits (812), Expect = 7e-85, Method: Composition-based stats. Identities = 100/394 (25%), Positives = 177/394 (44%), Gaps = 28/394 (7%) Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL------------------ 138 A +++ M + + RLS+QF LA +N + Q L Sbjct: 50 AGERLLAMQHDQDRLSDQFRALAADALASNNEQFLGLAEQRLRSTQVAGQADLAARTEAV 109 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 L++PL L R+Q+Q + L ++R ++ + + + +L AL+ Sbjct: 110 QQLVAPLTRSLSDVRQQMQVAEEARIASTSALAEQVRGMRDASELLRSQTSSLVSALRTS 169 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 + +G WGE+ L RV+E +G+ ++ Q + D + ++PD++V L GK++V+DAK Sbjct: 170 D-VRGAWGEMQLRRVVEVAGMLNRVDFVEQSHVSTDDGA-LRPDMVVHLAGGKNIVVDAK 227 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 + + Y A D R L H VR HI LG K Y + ++V+MFIP E Sbjct: 228 VAFLGYLDAQQATDPGYRAERLAAHARHVRKHIDDLGSKRYWDQFAP-SPEFVVMFIPAE 286 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 P A++ P L+ A N+++V+P TL+ LRT++ WR E + NAQ++ + +L Sbjct: 287 PFLAAAVEEDPSLLEYAFGRNVVIVTPMTLMALLRTVSYAWRQEALAENAQKVLEVGKEL 346 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + ++ ++ +G+ + A D Y + + L + VL A F L V P Sbjct: 347 HGRLATMGSHLTRLGKQIQGAADAYNKTVASLET---RVLVSARRFAELDVVDGDLETPP 403 Query: 439 LAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 + L + DE+ ++ + Sbjct: 404 PVSPHLGVVSAPELLAS----VDESLVDLEDLRR 433 >UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=Q7VK39_HELHP Length = 456 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 133/444 (29%), Positives = 233/444 (52%), Gaps = 27/444 (6%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +++ A L G +I WL+ ++ +++++ +A L Q + + H + Sbjct: 8 LLLIICASFVLSGGSI-WLWLHHRFKKKQSQLIATHNATTQSLQIQIQNLEK--HIQTLS 64 Query: 63 ELLNNEVRSLQSINTSL-----------EADLREVTTRMEAAQQHADDKI----RQMINS 107 +LQ I +S EA L E TR E ++ + + Sbjct: 65 LEYAQATTTLQMIESSHTQRLNDMQKVCEARLLEEKTRSEHMIHTLKEQFYHTQEEQDKN 124 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 ++ L F+ ++ I + + ++ SL PLRE++ F +Q+ D+ + Sbjct: 125 KEELKNAFKAISADILRQNTQSFNQMQLLSL----QPLREEITRFTKQLNDNHTATLTQH 180 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L +I L +LN Q++ +A NLT ALKG NK QGNWGE++L RV E SGL+EG EYE Sbjct: 181 TALQTQIEQLSKLNVQLSNDAHNLTNALKGGNKAQGNWGEIILQRVFENSGLQEGREYEL 240 Query: 228 QVSIENDARSRMQPDVIVRLP----QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 Q+S+ ++ ++PD IV+LP + + V++D+K +LVAYE+ NA+++ + SA +E Sbjct: 241 QISMRDEQSQILRPDAIVKLPKSGNEQRCVIVDSKTSLVAYEKLCNAQNEMQKLSAQKEL 300 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 S++ H L K+Y Q + LD+VLMFIP+E AFL A+ L A + ++LV Sbjct: 301 AHSIQMHFNNLSAKNYHQYLQGQKLDFVLMFIPIEGAFLEAMQYDSTLYDRAYQKGVVLV 360 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTT++ L+ I NLW+ E++ +N +I + KL++++ F + + +G+++D + Y Sbjct: 361 SPTTIMAVLKIIHNLWQIEYRDKNINKIFNEIKKLFERIEKFENVLEQLGRNIDTMRKTY 420 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGL 427 M K + +G + +++ L Sbjct: 421 DDVMTKYNGKQG-IAPKSKDIDKL 443 >UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XY83_9BACT Length = 477 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 125/477 (26%), Positives = 248/477 (51%), Gaps = 41/477 (8%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ--SEHWRAECE 63 M Y + L+G I +L+ Q+ ++ + + +LS ++ + ++ +A E Sbjct: 1 MFYILTFLLGALIVYLWLKAQNTKELGQLKTDLSLAQNQLSIVRENAAKSLADAKQAAAE 60 Query: 64 LLNNEVRSLQ--------SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----L 111 L N+ ++ + ++ SL+A R+E ++HA + ++ + L Sbjct: 61 KLENQQKTFEVRLSSEKEAMAKSLQAVKDNAQERIEQEREHAANLREELQKENENKLKLL 120 Query: 112 SEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 E+ N+ ++ ++++ ++ L++LL+PL+E+L+ F + V S + A+ + + Sbjct: 121 QEEVRNMGEQMLTEHRQKLNTADKDRLDALLNPLKERLEAFSQTVTKSSKESAEAKTEIR 180 Query: 172 HE--------------------------IRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 + L++ ++ +A +LT+ALKGD+K QG+W Sbjct: 181 TTFEESLKRLQEGQKHNIELMREDHLRAVEELKKQTERIGNDAASLTQALKGDSKMQGDW 240 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE++L LE GL++G +Y Q +++++ + +PD I+ P + VIDAK++L AY+ Sbjct: 241 GEMILEHTLEDCGLKKGEQYFLQENVKDEDGNNYRPDAIIAFPNNERAVIDAKVSLTAYQ 300 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 AE ++ L+EHI SVR H+ L K+Y L + YVLMFIP E + A+ Sbjct: 301 AALKAESKDEQDKYLKEHIKSVRTHVDELAAKNYDVLVPG-CIGYVLMFIPYESGYSAAI 359 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 ++ A + +I+++SP+ LL+AL+ +W+ ++N ++I +++ LYDK LF Sbjct: 360 KTDASILQYAYRKHIIILSPSNLLMALQLTHTMWQNYRLNKNVEEILRQSNDLYDKFALF 419 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 + IG S+D+ + Y +A +L++G+GNV+ + E+ + LG+ K+E ++ + Sbjct: 420 AETFINIGASIDQLKTRYDKARGQLNTGKGNVVRKLESLKALGITPKKENPLEIENR 476 >UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8A5_9GAMM Length = 429 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 105/409 (25%), Positives = 196/409 (47%), Gaps = 24/409 (5%) Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN----R 121 N ++R L++ N+ L L + D Q+ N+ +LS + N N R Sbjct: 34 NKKIRMLETRNSELALTLELEQKNKQQLDAMLDQTREQLANTFNQLSNEALNRNNSNFLR 93 Query: 122 IFEHSNRRVDEQNRQ-------SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 + E + +R + + ++ +L P+ E L +Q+ + + +L I Sbjct: 94 LAEENLKRFQSEAKADLGTKEKAIEQMLKPINEALQQTSKQIHEIEKDRKESYGSLRSTI 153 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 + + Q+ E NL +AL+ + +G WGE+ L R+ E SG+ ++ Q + Sbjct: 154 DQMTKSQQQLQLETQNLVQALRR-PEVRGQWGEMTLRRLAELSGMVAHCDFFEQTHTNTE 212 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 S ++PD+IV+LP+ +D+++DAK L AY A+DD TR+ L+ H +R+ ++ L Sbjct: 213 TGS-IRPDMIVKLPEKRDIIVDAKTPLDAYLSAIQAKDDSTRQKELKRHAQVIRSRVKEL 271 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 RK+Y + ++V++FIP E AL+ P L+ +++ NI+L +PT + LR Sbjct: 272 ARKNYW-AEYSNSPEFVVLFIPGEQFLAAALEVDPALLEDSMSQNIILATPTNFIALLRA 330 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 ++ W+ + + NA+ I + LY ++ F + +S +G SL +++ A+ L Sbjct: 331 VSYGWKQQALAENAENIRELGETLYKRLSTFGNHLSKLGNSLGSTVNHFNSAVGSLE--- 387 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 VL A F +G+ K +I+ E + R V + +D+ Sbjct: 388 RQVLPGARKFTEMGISSKHKIS-------DLPPIEQQPRPVQQNTDDDH 429 >UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS3_9GAMM Length = 442 Score = 315 bits (807), Expect = 3e-84, Method: Composition-based stats. Identities = 112/456 (24%), Positives = 205/456 (44%), Gaps = 28/456 (6%) Query: 32 AEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRME 91 A +L E AA + + LN + LQ+ N LEA+L R E Sbjct: 2 AGELTELSTTAWLALAAALLVGLLLGYTLASLRLNRRIGDLQTRNARLEAELEGAEQRRE 61 Query: 92 AAQQHADDKIRQMINSEQRL--------SEQFENLANRIFEHS---NRRVDEQNRQSLNS 140 +Q + +++ S L S QF LA I + ++ + + Sbjct: 62 DLRQSFETARQELDRSFSALASEALEANSNQFLRLAQSILTQKLSEGQNEIARSENKVEA 121 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 +L P+RE L ++ AQ L +I+ L NA + +EA NL +AL Sbjct: 122 MLKPIRETLGKTEAEINAMERSRAQAFAALNEQIQRLSSDNATLQREAHNLVQAL-SRPG 180 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 +G WGE+ L R +E +GL ++ Q ++ + R +PD++V +P + +V+DAK Sbjct: 181 VRGRWGELTLKRAVELAGLSAHCDFTEQPAL-DGDGGRQRPDLLVHMPGNRALVVDAKTP 239 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY A D R +A + H +R+ + L K Y ++ ++ ++F+P +P Sbjct: 240 LDAYLDAVAATDPEPRAAAFKRHAQHLRSRVTELSSKQYW-ASVEQSPEFAVLFLPGDPF 298 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 AL+ +P L+ AL+ ++L +P+TL+ LRT+ W+ + +A +I D ++L Sbjct: 299 LAAALEHEPGLLEYALERQVLLATPSTLIALLRTVEYGWQQSQLTEHALEIRDLGAELSH 358 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR-EINPDL 439 ++ + M+ +G++LD++ D + + + L V+ A F+ LG+ ++ PD Sbjct: 359 RLGTMTEHMARLGKALDQSTDAFNKTVGSLE---RQVMPSARRFQELGIRARKTPETPDT 415 Query: 440 AEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 R+ D+A D+ +++ Sbjct: 416 LNN----------RARRPVEVDDAGDTGDDNKPETQ 441 >UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C0V9_BEUC1 Length = 523 Score = 315 bits (806), Expect = 4e-84, Method: Composition-based stats. Identities = 117/476 (24%), Positives = 224/476 (47%), Gaps = 34/476 (7%) Query: 1 MDFSIMVYAVIAL-VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 MD + ++ A+ AL +G A+GW A+ + ++A ++R +AA++ ++ Sbjct: 1 MDTTDLLIAIAALVIGGAVGWFAATARAGSERARLGSDRRAAQERAAAAERSAEAADRAW 60 Query: 60 AECELLNNEVRSLQSINTSLEADLR------EVTTRMEAAQQHADDKIRQMINSEQRLSE 113 A V + + +AD R ++E + A +++ ++ +RL++ Sbjct: 61 AGRLEDERRVTARRVEEERDDADRRVAEAEHRAEVQLERERTAARERVEELRADSKRLAD 120 Query: 114 QFENLANRIFEHSNRRVDEQ------------------NRQSLNSLLSPLREQLDGFRRQ 155 +FE L+ + + ++ Q Q++ L+ PL L + + Sbjct: 121 EFETLSRKALAANTQQFLAQAEERLKRTQVESAAELAKREQAVKQLVEPLTRTLGDVKSE 180 Query: 156 VQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLE 215 + ++ L ++R +QQ + Q+ E L AL+ + +G WGE+ L R++E Sbjct: 181 MTEAEKARLAAHTALAEQVRAMQQSSEQLRTETSQLVTALRA-PQVRGRWGELQLRRIVE 239 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYT 275 A+G+ E ++E Q ++ + ++PD++V+LP K +V+D+K+ Y A DD T Sbjct: 240 AAGMVEHVDFEEQETVADGT---LRPDLVVKLPGRKQIVVDSKVAFSGYLEAMEARDDET 296 Query: 276 RESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA 335 R L H +R HI LG KDY + ++ +MF+P E AL++ P L+ A Sbjct: 297 RAKRLAAHARHLRRHIDDLGAKDYGHHVEG-SPEFTVMFVPAEVFLNAALEQDPTLLEHA 355 Query: 336 LKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQS 395 ++++ +P+TL+ LRT+ WR E + AQQ+ +L+ ++ +F +S + + Sbjct: 356 FAQDVVIATPSTLVALLRTVGYTWRQEMLAAEAQQVFSVGRELHKRLSVFGGHLSTLAKR 415 Query: 396 LDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL-GVEIKREINPDLAEQAVSQDEEY 450 L+ D + + L S V+ QA F L G+E ++ P L AV + Sbjct: 416 LNSTVDAFNKMSSSLDS---RVVTQARKFSALQGLEPDLDVPPPLEVLAVPSQKPD 468 >UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFB9_9RHOB Length = 495 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 128/490 (26%), Positives = 231/490 (47%), Gaps = 49/490 (10%) Query: 9 AVIALVGVAIGWLFASYQHAQ----QKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 A + L GV++ L ++ A + +E AE E EL A+ ++ Q E R + E Sbjct: 14 ACLILGGVSVVLLRKAWGEADGLRTRLSEMQAELSEAQLELREAQTELRQIESLRVDLEK 73 Query: 65 ------------------------LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 L ++ + + ++LR + R+E + Sbjct: 74 TRTVRDQAERELASARTQADRVQGLEEQLEATRQAEQRASSELRALRERLEERDAAVKAE 133 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS-----------LNSLLSPLREQL 149 ++ Q + ++F+ LA+ + S++++ EQ +QS + SL+ P+RE+L Sbjct: 134 RERLTALSQEMQDRFKALADEALDVSSKKLLEQAQQSFKTQHEKAEGGVKSLVDPIRERL 193 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 D FR QV+ A+ + +I L Q +E L AL+ + T+G WGE Sbjct: 194 DKFREQVEKMEQDRARNSGAIAEQITKLSQGLNDQHKETAKLVNALQRKSTTRGQWGERT 253 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 + +LE +GL + +Y+ Q + + ++PD +++LP G V+D+K+ L AY Sbjct: 254 VENILELAGLTKNIDYDAQHQTRDTDGAALRPDFVIKLPGGGRFVVDSKVALTAYLDAVE 313 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 AED+ +R AL+ H V+ H++ L +K+Y +D+V +FIP E + A++ P Sbjct: 314 AEDEASRRDALRRHAQQVKTHVKQLAKKEYAASVDG-AIDFVALFIPGESFYSAAIEEDP 372 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 L +A+K N+++ +P TLL + +A +R E +NAQ++A +L+ ++ F D + Sbjct: 373 ALFDDAIKANVIITTPATLLALAKAVAYGFRQEKLEQNAQKVAALGDELFTRLNTFSDHL 432 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +G L A NY +A+ S VL +A L ++K+ +P DE Sbjct: 433 GRVGAGLKSATANYNKAVGSFDS---RVLPKARDMAQLNGQMKQIESP------AQVDEA 483 Query: 450 YRLRSVPEQP 459 RL + P++ Sbjct: 484 PRLLTGPDEE 493 >UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZS87_OPITP Length = 462 Score = 313 bits (802), Expect = 1e-83, Method: Composition-based stats. Identities = 118/452 (26%), Positives = 210/452 (46%), Gaps = 49/452 (10%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 V + WL +HA + A EE ++ E + E+ L Sbjct: 37 VSGLLVWLLLVARHAPVRERLRAASEE--------------NQRLATELAAVRAELAQLS 82 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE- 132 S+NT L +T++ A + A +K+ +I++ RL+ +F+ L+ +N E Sbjct: 83 SLNTQL-------STQLAAERASATEKLATLIDAHTRLTNEFKALSADALSRNNTSFLEL 135 Query: 133 -----------------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 Q +Q++ +L+ PL+E L ++ + +LT ++R Sbjct: 136 ARETFAKLQQQSVGELAQRQQAITALVQPLKESLQQVDAKIGAIENARKEAYGSLTEQLR 195 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 +L Q+ EA L+ AL+ G+WGE+ L RV+E + + ++ Q + Sbjct: 196 SLNTAQLQLQSEASRLSTALRSTTYA-GSWGELQLRRVVEMADMLGYCDFCEQ-----ET 249 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 ++ D++VRLP G+ +V+DAK L ++ A D+ R + L EH VRNHI LG Sbjct: 250 SGSLRADLVVRLPGGQRIVVDAKTPLESFRAASEATDENVRAARLAEHAQKVRNHIDALG 309 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 K+Y + ++V++F+P + AL L+ A+ ++L +P+TL+ L+ Sbjct: 310 AKNYWEQFQP-APEFVVLFLPGDQFLGAALHADSSLMDRAIAKRVLLATPSTLIALLKAA 368 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 A WR E S+NA++I+ +LYD+M F + + IG+ LD A Y A+ S Sbjct: 369 AYGWRQESISQNAEEISLLGRQLYDRMVTFAEHLDKIGRGLDNALKGYNSAVGSFES--- 425 Query: 416 NVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 +V+ A F LG +E++ +A +++ Sbjct: 426 SVMPGARRFAELGARGAKELSTPAVVEANARE 457 >UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MSJ8_9BACT Length = 465 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 115/453 (25%), Positives = 235/453 (51%), Gaps = 32/453 (7%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 I +L+ + Q ++ + + ++L A ++ I E + ++ + Sbjct: 15 VISFLWLKGKMTQDVSKANEQLAALRSQLEAEQKSIEDRLAVAKENATQQVDATK-EAAD 73 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----LSEQFENLANRIFEHSNRRVDE 132 LE T R+EA ++H ++ ++ + L E+ N+A ++ S +++ Sbjct: 74 RQLEEVKNSYTQRLEAERKHNEELRNELQKQAEAKNKLLQEEVRNMAAQMLSESREKMNT 133 Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE------------------- 173 +++ L +LL+PL+++L+ F + V ++ + A + + Sbjct: 134 ADKERLEALLTPLKDRLEAFNQTVTNNSKETAANKTEIKTTFEEAMKRLHAEQEMTIKAM 193 Query: 174 -------IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 ++ L++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL + ++ Sbjct: 194 REDQERTVKELREQTERIGNDAASLTKALKGDSKMQGDWGEMILEKTLEDCGLIKDQQFF 253 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q + +++ + +PD ++ LP + V+D+K++L AY+ D +E L+EH++S Sbjct: 254 LQENYKDEEGNNFRPDAVIELPNKERAVVDSKVSLTAYQSAIKETDPDEQERLLKEHVSS 313 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VR HI L K Y+++ + YVLMFIP E + AL P ++ A + +I+++SP+ Sbjct: 314 VRKHIDELSAKGYEKIVPG-CIGYVLMFIPYESGYSAALKTDPSILQYAYRKHIIVLSPS 372 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 LL+AL+ +W+ ++N +I +++ LYDK F + IG S++K Q ++ +A Sbjct: 373 NLLMALQLTRTMWQNYRLNKNVDEILRQSNDLYDKFVTFGETFVKIGTSIEKLQSDFNKA 432 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 +L+ G+GN++ + E + LG+ K++I +L Sbjct: 433 KGQLNEGKGNIIRRLEGMKTLGITPKKQIPDNL 465 >UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRQ8_THISH Length = 417 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 102/377 (27%), Positives = 189/377 (50%), Gaps = 25/377 (6%) Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD-------------- 131 + ++A ++ +++ S +++++ F +AN+ +N Sbjct: 35 LQAELDAERRRGEERAAAFEESRRQMADSFSAMANQALHQNNEAFLRLAQEQLKAFQVQA 94 Query: 132 ----EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 Q +S L+ P+RE L+ Q++ +LT +R + + ++ E Sbjct: 95 SAELTQKEKSFEGLVKPIRETLEKTEAQIRAMEQARESAFGSLTQHLRIMAEGQQRLQNE 154 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 NL RAL +G WGE+ L R+ E +G+ E +++ Q + + M+PD+IVR+ Sbjct: 155 THNLARALSRPT-VRGQWGEMTLKRLAELAGMVEHCDFQEQTHRATEDGA-MRPDMIVRM 212 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P +++V+DAK L AY +A DD RE L+ H +R +R L K Y + Sbjct: 213 PDARELVVDAKTPLDAYLAAVDAPDDKHREQHLKTHARKLRERMRELSSKAYWTQFK-ES 271 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 D+V++FIP + AL+ P L+ +AL N ++L +P++L+ LR +A WR + + N Sbjct: 272 PDFVILFIPGDQFLSAALEHDPALLEDALSNRVILATPSSLVALLRAVAYGWRQQAVAEN 331 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A++I + +LY ++ F + + IG+SL + D+Y +A+ L +V+ A F L Sbjct: 332 AEKIRELGEELYKRLATFTEHLGRIGKSLGSSVDHYNKAVGSLE---RSVMPGARRFAEL 388 Query: 428 GVEIKREI-NPDLAEQA 443 G++ ++++ P EQA Sbjct: 389 GIQARKQMEEPVPLEQA 405 >UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGB7_KOSOT Length = 439 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 110/433 (25%), Positives = 206/433 (47%), Gaps = 31/433 (7%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + EL ++ ++ EH+R E + L E+ SL++ N L+ + + E + DDK Sbjct: 27 LYKELKKNIEEKSKFEHYREENQNLLKEIDSLRAENEHLKIE----KAKYEKDIESLDDK 82 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ-----------NRQSLNSLLSPLREQL 149 + + +++ L + F+ LA+ + + Q + L LL PL+ L Sbjct: 83 LSWLEKAKEELEKNFKALASDVALKNTESFLNQANDKLKGLIDNQKTELEKLLDPLKNNL 142 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 D + +++ K + L + L +++ ++ LT +LK +G WGE Sbjct: 143 DTLQNNIREIESKREKAYGGLEKRLEELSRVHNELQTGITKLTSSLKSTT-ARGRWGEFQ 201 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 L R++E +G+ ++E Q E +PD+I++LP G + +DAK L AY Sbjct: 202 LKRIVELAGMTAHIDFEEQEVTEAG-----RPDMIIKLPNGGVIPVDAKAPLNAYLEAME 256 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 + D ++ L EHI ++R I LG K Y + ++ D+V+MF+P+E A A + P Sbjct: 257 CQSDEEKKKKLNEHIKNLRKTITNLGSKAYWE-QFQQSPDFVIMFVPLEAAVSAAFEMDP 315 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 L+ +A+K +++ +P TLL L+++A W+ + NA++IA+ +LY ++ F++D+ Sbjct: 316 TLLEDAVKRKVLITTPITLLALLKSVAYGWQQFQLTENAKKIAEEGKELYKRLSKFLNDV 375 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +G+ L Y A+ L + +L +A F+ E + E + Sbjct: 376 DTVGKRLKSLVQAYNTAVGSLET---RLLPRARKFKEYSEIEGEEPDIQPLEV------D 426 Query: 450 YRLRSVPEQPNDE 462 R + PE +E Sbjct: 427 PRPINAPELSEEE 439 >UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BC1 Length = 364 Score = 310 bits (794), Expect = 9e-83, Method: Composition-based stats. Identities = 91/339 (26%), Positives = 167/339 (49%), Gaps = 6/339 (1%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 + R E+ Q++++++ P+ + L Q+ A +R L +I+ L + Sbjct: 19 VLALRGRHSTERRAQTVDAMVDPIHQSLRRVDEQLAALDRDRAHQRGALEQQIKQLVESQ 78 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ E L AL+ T+G WGE+ L RV+E +G+ + ++ Q S++ ++P Sbjct: 79 ERLRGETGALVAALR-QPHTRGRWGELQLRRVVELAGMLDHCDFTEQASVQ-GEHGVLRP 136 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D++V LP GK VV+DAK L A+ + A+D+ TR L +H +R H+R L K Y Sbjct: 137 DLVVNLPGGKHVVVDAKAPLHAFLNAYEAQDETTRTRELAQHARLLREHVRALSAKAYW- 195 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 D+V +F+P E + AL+ P L+ + +++ +++ +PTTL+ LR +A W+ Sbjct: 196 AQFPTAPDFVFLFLPGEHFYTAALEADPSLLEDGVRDGVLIATPTTLIALLRAVAYGWQQ 255 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E + +A+Q+A+ +L+ ++ F + +G L A Y +A+ S VL A Sbjct: 256 ETVAESARQVAELGRELHHRLGTFGAHLDRVGTRLRSAVGAYNEAVGSFDS---RVLPSA 312 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 F GV + P +A ++ E + + Sbjct: 313 RQFSRHGVVGRERELPAVAPVDLTARELHAPELREDDTP 351 >UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PD09_9BACT Length = 438 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 135/415 (32%), Positives = 229/415 (55%), Gaps = 19/415 (4%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLN-NEVRSLQSINTSLEAD-LREVTTRMEAAQQHA 97 E + Q + +++ A E + + +QS+ + +E + L R E+ QQ A Sbjct: 22 EAKSAGEEKTQLVAKAQVLAANIEQIKLHHASEVQSMKSQMENERLYAAKLRAESDQQWA 81 Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 K+ + QR++ + + +A + E NR ++ LL P++EQ F++ V+ Sbjct: 82 Q-KLESLKQEMQRMTIEQQKVAAEQLAAKQSALQENNRLQMDELLKPIKEQFADFKKSVE 140 Query: 158 DSFGKEAQERHTLTHEIR---------------NLQQLNAQMAQEAINLTRALKGDNKTQ 202 +S + + L + NL++ ++ +A NLT+ALKGD+K Q Sbjct: 141 ESKTQNEVNKKELQNTFEATMKLFQQEQQQAVLNLKEQTEKIGSDAANLTKALKGDSKMQ 200 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G+WGE+VL +LE SGLR+ E+ Q +++ +PDVIVR P+G+ VVID+K++L Sbjct: 201 GDWGEMVLETILENSGLRKNEEFFIQEYTKDEEGKNYRPDVIVRFPEGRSVVIDSKVSLT 260 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY AED+ +E ++ H SVR HI L KDY +L + +VLMFIP E +++ Sbjct: 261 AYSDALAAEDEAEQERLMKAHALSVRKHIDELAAKDYSKLVD-DAIGFVLMFIPNETSYI 319 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 A+ +QP+L A + I+++SP+ LL+AL+ NLW+Y+ Q++N ++I A+ LYDK+ Sbjct: 320 AAMKQQPDLSRYAYQKKIIIISPSNLLMALQLAYNLWQYDRQNKNVEKIVKTAADLYDKV 379 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 F D ++G + + + +A K+L G GNV+ + E+ +GLGV K++I Sbjct: 380 AGFEDTFMSVGDLITRLSGTFDKAKKQLYDGTGNVMRRVESLKGLGVTPKKQIKE 434 >UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHM6_9HELI Length = 457 Score = 308 bits (788), Expect = 4e-82, Method: Composition-based stats. Identities = 132/453 (29%), Positives = 240/453 (52%), Gaps = 29/453 (6%) Query: 19 GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS 78 + + +H ++K + L A+ + + EH + +LQ + Sbjct: 21 QAILLTNKHYEEKIQDLQHTLTTTKNEHVAQLESLKKEHILSL-------TNALQERENA 73 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 L+A + M+ Q +K + ++++F ++ ++ E NR+ E+ SL Sbjct: 74 LKAQYTQKQELMQELLQTNQEKHTAL------MTQRFYEISEQLLEEKNRQFQEKQSDSL 127 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 PL +++ F+ ++ + L EI++L++ + +++ +A NL A++GD Sbjct: 128 ----KPLCDEIMRFKTEIAQHTKDNQERHIALNTEIKHLKEASLKISADATNLANAMRGD 183 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 +K QG WGEV+L R+LE+SGL++ EY TQV ++N+A+ ++PDV++ LP + VV+D+K Sbjct: 184 SKLQGQWGEVILERLLESSGLQKDREYYTQVFVKNEAKEILRPDVVIHLPNNRFVVVDSK 243 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 ++L AYER+FNA D ++E L HI SV+NHI+ L K YQ LD+V+MF+P+E Sbjct: 244 VSLSAYERFFNATD--SKEMHLNAHIESVKNHIKSLSLKQYQHCIEGGQLDFVIMFMPLE 301 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 A+ L +L ++ I+L +PTTL+V LR I ++W E + +N +I KL Sbjct: 302 GAYSAILQHDMQLFLDSYNKGIILAAPTTLMVILRLIHHIWSNEAKDKNITKILQECVKL 361 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP- 437 K F + M I ++L+ AQ+ Y +A ++ GRG++ + + +I + P Sbjct: 362 IKKFDGFTESMEKISRALETAQNAYEKAEIQI-RGRGSLGSYIKNLDNYMSQITTDTKPQ 420 Query: 438 ------DLAEQAVSQDEEYRLR--SVPEQPNDE 462 + E ++++EE ++ ++PE DE Sbjct: 421 TSPKNNETLESHINKEEEEHIQNDTMPETTEDE 453 >UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=uncultured bacterium RepID=A5H239_9BACT Length = 404 Score = 308 bits (788), Expect = 5e-82, Method: Composition-based stats. Identities = 110/421 (26%), Positives = 205/421 (48%), Gaps = 29/421 (6%) Query: 1 MDFSIMVYAVIALV-GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 M+ M+ AL+ G+ G+L AS + AE E SAA+ R Sbjct: 1 MNLPAMLLTAGALLFGLLAGYLLASMRFHA------AETGRAALEGSAAE--------LR 46 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + E+L + ++ QS + T ++ +++ ++ + + ++ + + F +LA Sbjct: 47 NQVEILRSSLQEQQSRLEKEKELRAAAETSLQKVEENLAEQRQALDQAKAEMKDVFRSLA 106 Query: 120 NRIFEHSNRRVDEQNRQSLNS-----------LLSPLREQLDGFRRQVQDSFGKEAQERH 168 + + ++ E ++ L L+ PL E+L + Q Sbjct: 107 SEALSATTQQFIELSQAHLEGELEPRKIAIEGLVHPLAERLKDLESHLSQLESARQQAYG 166 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 L ++R L + + QE LT AL+ + +G+WGE+ L R +E +G+ ++E Q Sbjct: 167 ELISQVRQLSDVGRDLRQETGTLTSALRH-PRVRGSWGELTLRRAVELAGMSPHCDFEEQ 225 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 ++ + R++PD+IV +P +D+V+DAK+ L A+ + ++ + R+ A++ H VR Sbjct: 226 GTLTAEDG-RLRPDLIVHMPGNRDIVVDAKVPLSAFLKASESDTEAQRQEAMRSHARLVR 284 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 HI+ LG K Y + V++F+P E F AL+ LI +AL+ ++L SPTTL Sbjct: 285 EHIQQLGSKAYWNELPGN-PELVILFMPGESFFSAALECDRTLIEDALERRVLLSSPTTL 343 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + LR+IA WR NA QI+D +LY ++ F++ ++ + + LD+A Y +++ Sbjct: 344 IAILRSIAYGWRQHQMEENAAQISDLGKELYSRIVKFVEHIADVREGLDRAAAAYNRSVG 403 Query: 409 K 409 Sbjct: 404 S 404 >UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinispora RepID=A8M2X7_SALAI Length = 403 Score = 307 bits (787), Expect = 5e-82, Method: Composition-based stats. Identities = 94/368 (25%), Positives = 169/368 (45%), Gaps = 13/368 (3%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 R + + E RL + L+ Q+++++ ++P Sbjct: 27 AARVRSATELARLEATLAAARAGESRLEQSLRTLSYEA--------TAQSQEAVARAVAP 78 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L E L + ++V + L ++R + ++ ++ E L AL+ + +G Sbjct: 79 LHETLHRYEQRVNELERDRVDAYAELRAQVRAMSTVSGELRTETKQLVAALRA-PQVRGR 137 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE L R++EA+G+ E ++ QV+ + ++PD++VRL G+ VV+DAK+ AY Sbjct: 138 WGEHQLRRIVEAAGMLEHCDFAEQVTAATTDQRVVRPDLVVRLHGGRSVVVDAKVPFEAY 197 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 A D+ R++ L H +R HI L K ++ ++V++F+P +P +A Sbjct: 198 LTAMEARDERGRDTHLDAHARHLRAHIDALAAKA-YWAAFDQSPEFVVLFVPADPFLDVA 256 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 + R P L+ A N++L +P TL+ LRT+A WR E + NA + A +L+ ++ Sbjct: 257 VQRDPTLLEHAFARNVVLATPATLVALLRTVAYTWRQEVLASNAVAVHTLARELHGRLCT 316 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 + + +G +L A Y +A+ L + VL A LGV + P E A Sbjct: 317 LGEHVGRLGSALGGAVTAYNRAVGSLEA---RVLVSARKLAELGVSDEELATPAQVELAP 373 Query: 445 SQDEEYRL 452 Q + L Sbjct: 374 RQPQAPEL 381 >UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W7V4_9BACT Length = 460 Score = 307 bits (786), Expect = 8e-82, Method: Composition-based stats. Identities = 129/464 (27%), Positives = 234/464 (50%), Gaps = 26/464 (5%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 +Y I LV AI F K ++L + + A +Q++ +AE + L Sbjct: 3 FIYLAIGLVVGAIVVFFLL----NGKLKKLETSNILSNQQLAHEQEL--GTQLQAERDRL 56 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQ-HADDKIRQMINSEQRLS---EQFENLANR 121 E Q +++ +L VTT++E+ Q H+ + + EQ+L EQF NLA R Sbjct: 57 QCEQAEQQQQLITIKLELERVTTQLESEQASHSKETEMRREQFEQQLKTVQEQFSNLATR 116 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 I E ++ R+ N +S+ L PL+ ++ ++ +Q + + ++ +L+ ++R + Sbjct: 117 ILEQTSERLKTTNNESMEHLTKPLKMNIEQLQQAIQHTNTETSKNTASLSQQLREMSLQT 176 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS---- 237 ++ A LT ++G NK QGNWGE +LT +LE+ G + G +Y+ Q ++ ++ + Sbjct: 177 QKIESTATRLTNVIRGGNKAQGNWGERILTDILESQGYKVGIDYDIQHTLTDEKGNAIKN 236 Query: 238 -----RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 RM PDVI+ P +DV+ID+KM++ AY +Y N E++ ++ + ++S+R Sbjct: 237 DDTGRRMIPDVILHYPNNEDVIIDSKMSIDAYYQYVNTEEEALKKKFAADLVSSIRTQAT 296 Query: 293 LLGRKDYQQL--PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 L +KDY + + +D+V+MF+P E A LALD P++ EA + + S L+ Sbjct: 297 NLAKKDYSKYVHSPRKAIDFVIMFVPNEGALQLALDTDPKIWGEAFDKQVFITSQQNLMA 356 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 LR I WR Q+ N +++ A +L ++ FI IG+ +D +Y + K Sbjct: 357 ILRMIQIAWRQYAQTENQKKVFALAEELLKRVGEFIKRFDKIGKDIDMLHKDYGETYNKA 416 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREIN-----PDLAEQAVSQDEE 449 +GR +++ +A + LGV+ PD+ + ++E Sbjct: 417 YTGRQSIVQKANELKELGVKESANQPIPMTQPDVLDITEENEDE 460 >UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKL5_NAKMY Length = 398 Score = 306 bits (785), Expect = 1e-81, Method: Composition-based stats. Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 7/322 (2%) Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 D+++ L++LL+P + + + + + A L ++ L +A + + Sbjct: 34 DQRSAAELDALLAPASDAMQRVEQHLHEVERDRAAAYAGLREQVSALHLTSADLNRHTRA 93 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA--RSRMQPDVIVRLP 248 L AL + +G WGE+ L RV+E +G+ E +++TQV + +D + ++PD+I+RL Sbjct: 94 LAGALSA-PQVRGRWGEMQLQRVVELAGMVEHCDFDTQVGVRSDDPEAAGVRPDMIIRLA 152 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 G+ + +DAK+ +Y D+ R + L H ++R+H+ L K Y + Sbjct: 153 GGRQIPVDAKVPFASYLEAAECTDERRRSALLAAHSRALRSHVDALAAKAYWRHFQP-AP 211 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V++F+P EP AL P L A N+++ +PT+L+ LRT+A++WR E S +A Sbjct: 212 EFVVLFVPGEPLLDAALAVDPGLADYAFARNVVMATPTSLIGLLRTVAHVWRQERLSASA 271 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 Q+ + L+ ++ ++ +G SLDKA Y ++ L S VL A LG Sbjct: 272 AQVHELGRDLHRRLATLAGHLTTLGASLDKAVRAYNGTVRSLES---RVLVSARKLADLG 328 Query: 429 VEIKREINPDLAEQAVSQDEEY 450 V + +P E +E Sbjct: 329 VTGEELPSPAQVETTTLVPQEA 350 >UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9Q8_9ACTO Length = 387 Score = 304 bits (779), Expect = 5e-81, Method: Composition-based stats. Identities = 90/318 (28%), Positives = 146/318 (45%), Gaps = 5/318 (1%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L P+ E LD R + A L ++ + Q +A + QE L AL+ Sbjct: 53 LEPVHESLDHLHRLLAGIERDRATAHGELREQMGTVGQTSAMLRQETAALVTALRT-PHV 111 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGEV L RV+E +GL E ++ Q S NDA + ++PD++V L G+ VV+DAK+ Sbjct: 112 RGRWGEVQLRRVVEVAGLLEHCDFVEQPSATNDAGAGVRPDLVVTLSDGRQVVVDAKVPF 171 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 Y AED R + H +R H+ +L + Y + ++F+P + Sbjct: 172 TGYIEAVQAEDVAVRAERIVAHARQLRAHVDILAARRYPTAFRPAAP-FTVLFVPSDGFL 230 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL+ +P L+ +++L +P+TLL LRT+A WR E +R+A Q+ + +L+ + Sbjct: 231 TTALEAEPGLLEYGFARDVVLATPSTLLALLRTVAYSWRQERLARDADQVLEVGRRLHAR 290 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + ++ +G +L Y + + S +VL A F LGV P E Sbjct: 291 LSTLSGHLTRLGSALSSTLTRYNETVGSYES---SVLVAARRFDDLGVAESPVPTPPPVE 347 Query: 442 QAVSQDEEYRLRSVPEQP 459 V L + P Sbjct: 348 ATVRTLRPAELPLPGDLP 365 >UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BYP8_XYLCX Length = 494 Score = 303 bits (777), Expect = 7e-81, Method: Composition-based stats. Identities = 120/439 (27%), Positives = 213/439 (48%), Gaps = 18/439 (4%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHW--RAECELLNNEVRSLQSINTSLEADLREVT 87 + A + AE E + E + + Q+ ++ R E R L + EA LRE+ Sbjct: 39 ELARRHAEVEGLRNEAAGLRDQVQRAHDDADRRVAETRQEGDRRLAEARSEAEARLRELK 98 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE---QNRQSLNSLLSP 144 EA +Q + Q S+QF +LA + + S + +E Q Q++ +L+ P Sbjct: 99 VDQEAEKQRF---RTIAGEALQANSQQFLDLAAQTLKASTVKNEEALVQREQAIKALVEP 155 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L + L+ R +V + + TLT +R L N+++++ +L AL+ ++T+G Sbjct: 156 LSKSLEQVRTEVAQAEKSRIEGHSTLTEHLRQLSVANSELSKGTGDLVTALRS-SQTRGA 214 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE+ L RV+EA+G+ +++ Q S+ D + ++PD++VRL GK+VV+D+K+ + Y Sbjct: 215 WGELQLRRVVEAAGMLRNVDFDEQASVSTDDGT-LRPDMVVRLAGGKNVVVDSKVAFLGY 273 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 +D RE+ L H+ +R H+ L K+Y + ++V+MF+P E A Sbjct: 274 LEAQQTDDADYREARLDAHVRHLRKHVDDLAGKEYWEQFSP-APEFVVMFVPAEAFLSAA 332 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 ++R P L+ A + N+++ +P T+L L+T+A WR E + NAQ++ +LY ++ Sbjct: 333 VERDPGLMEYAARQNVIIATPMTMLALLKTVAYAWRQEALAENAQKVLTVGKELYSRLVT 392 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 ++ G ++ +Y + L S VL A L V + E+ Sbjct: 393 MTGHITKTGNAIASVTKHYNSMIGSLES---QVLTSARRMVALDVVDE----SRAIEELT 445 Query: 445 SQDEEYRLRSVPEQPNDEA 463 D R + PE EA Sbjct: 446 GIDATPRPITKPELLAAEA 464 >UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7P5_ANADF Length = 428 Score = 303 bits (776), Expect = 9e-81, Method: Composition-based stats. Identities = 103/375 (27%), Positives = 190/375 (50%), Gaps = 24/375 (6%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------ 132 E+ + A + A++K + ++ RLS+ F+ L+ S+ E Sbjct: 40 ELEATLAAERAGAEEKRALVEDARARLSDAFKALSADALRDSSASFLELARAALGRERAA 99 Query: 133 ------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 + ++++ SLL+P+R+ L +++ LT ++R + + AQ+ Sbjct: 100 AEGELARRQEAIGSLLAPVRDALGRLDGELRAIERAREGAYGALTEQLRQVAEAQAQVRG 159 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 EA NL +AL+ + +G WGE+ L RV+E +G+ + ++E Q ++E D R++PD++VR Sbjct: 160 EAANLVKALRA-PQARGRWGELQLRRVVELAGMLDRCDFEEQATVEGDEG-RLRPDLVVR 217 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 LP G++VV+DAK L AY A DD R + L +H +R H++ LGRK Y + Sbjct: 218 LPGGRNVVVDAKAPLSAYLEAIEARDDGERRARLADHARQLREHVQQLGRKAYWERLRP- 276 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 ++ ++F+P E + AL+ P L+ + + +++ +PTTL+ L+ +A+ WR + Sbjct: 277 APEFAVLFLPGESFYAAALEADPTLLEASAERQVIVATPTTLIALLKAVAHGWRQAEVAE 336 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 NA+ +A +LY ++ + +G++L + Y +A+ L + VL A F Sbjct: 337 NAEAVAALGRELYKRIADLGGHFARLGRALGGTVEAYNRAVGSLEA---RVLPAARRFEA 393 Query: 427 LGVEIKREINPDLAE 441 L P+LA Sbjct: 394 LSAAPAEAELPELAP 408 >UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actinomycetales RepID=C1YHK2_NOCDA Length = 466 Score = 302 bits (774), Expect = 2e-80, Method: Composition-based stats. Identities = 96/401 (23%), Positives = 183/401 (45%), Gaps = 16/401 (3%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFENLANRIFEHSNRRV 130 + AD R R ++ D+ R + + + +++F LA + Sbjct: 17 ARGREAETRADARAAQERAAYVEEQLADRFRALSAQALDQTNQRFMELAEGRLRAVSAEA 76 Query: 131 ---DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 ++ R+++ ++ PL LD RQ++++ A L ++ +++ + ++ + Sbjct: 77 GGDLDERRRAVERMVEPLTRTLDRVERQLREADAGRAAAHAELAKQVEYVREGSERLRDQ 136 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 +L AL+ + +G WGE+ L RV E +G+ ++E Q + + +R +PD++VRL Sbjct: 137 TQSLVTALRR-PEARGRWGELQLRRVAELAGMGSHCDFEEQAATRDGSR---RPDMVVRL 192 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 GK++V+D+K+ L AY A L+ H +R H+ L K Y Sbjct: 193 AGGKNIVVDSKVPLAAYLDAVEAG-AEEAARHLRVHARHLRTHVDQLAAKAYWSAFTP-A 250 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V++FIP E AL+ PEL+ A+ + + +PTTL+ LRT W+ E S N Sbjct: 251 PEFVVLFIPGEAFLAPALEYDPELLEYAMGRRVHIATPTTLISLLRTAQYAWQQEALSEN 310 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+ + D +L++++ + +G++L + Y Q + L S VL A F L Sbjct: 311 ARAVFDLGKQLHERLGTLGGHVEGLGRALTRTVSAYNQTVGSLES---RVLVTARRFGEL 367 Query: 428 GV---EIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQ 465 G+ E+ R + + +AV+ E + + Sbjct: 368 GLVDGELDRPVGVEERPRAVAAPELSDPGGAGSAARERSGP 408 >UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PT19_9BACT Length = 432 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 126/394 (31%), Positives = 218/394 (55%), Gaps = 20/394 (5%) Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----LSEQFEN 117 + L E + + + +L+ +E +QHA++ ++ ++ L + ++ Sbjct: 35 KKQLETEREYAKRMLDQADDNLQRANQNLERERQHAEEMRKESDQRWEQKLDSLKKDMQS 94 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH----- 172 A R + + NR ++ LL P++EQ F+R V +S + + L Sbjct: 95 TAARELAAKQEELQKANRTQMDDLLKPIKEQFTDFKRAVDESKTQNEVNKTELQKAFEST 154 Query: 173 ----------EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 + +L+Q ++ ++A NL+RALKG+NKTQG+WGE+VL +LE SGL+ G Sbjct: 155 MKLFQQQQQQTVDSLKQQTERIGEDAANLSRALKGENKTQGDWGEMVLETLLENSGLQRG 214 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 E+ Q +++ + + +PDV+VR P+G+ VVID+K++L AY D++ R+ L E Sbjct: 215 EEFFVQETVKTEDGATFRPDVVVRFPEGRSVVIDSKVSLTAYADAVATNDEHERDRLLAE 274 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H SVR H+ L K Y +L + +VLMF+P E +++ A+ +QP+L A + I++ Sbjct: 275 HAKSVRRHVDELSAKSYDKLVE-DAIGFVLMFVPNENSYIAAMKQQPDLSRYAYQKRIII 333 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 +SP+ LL+AL+ NLW+Y+ QS+N ++I A+ LYDK+ F + + + L++ N Sbjct: 334 ISPSNLLMALQLAYNLWQYDRQSKNVEKIVKTAADLYDKVAGFTETFTELESQLERLARN 393 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 + QA +L G+GNVL + + R LGV K+ I Sbjct: 394 FGQARGQLFEGKGNVLRRIDGLRALGVTPKKRIK 427 >UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LJF3_9BACT Length = 401 Score = 299 bits (767), Expect = 1e-79, Method: Composition-based stats. Identities = 128/384 (33%), Positives = 213/384 (55%), Gaps = 11/384 (2%) Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 + LQ ++ R++A + A + R+ + L ++F +A+ + Sbjct: 29 DARSAELQRALQDMQTQKAVAEARLQAERVQAAETARRQA---EELKKEFHAIASDLART 85 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + + ++ ++L +LL P L F + + + I L + + Sbjct: 86 ESESLQHRHTEALRALLHPFDADLKRFYDRFTEGNV-------AMRTNIEQLIRQTQTVG 138 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 ++A LTRAL+G+ K QGNWGE +L +LEASGLR G EY+TQV+++++ R +PDV+V Sbjct: 139 KQAEELTRALRGNTKVQGNWGEGILADLLEASGLRIGQEYDTQVNVKDEQRDNYRPDVVV 198 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 LP ++++IDAK++L AY Y NAED+ + ++EH+ SVR HI L K Y +L Sbjct: 199 HLPDKRELIIDAKVSLSAYVNYVNAEDEVEQARFMKEHLQSVRKHIAELSAKRYDKLVPG 258 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 + YVL+FIP E A++ A+ P+L EA + I+L++PT LL+AL+ NLW+ E QS Sbjct: 259 -AIGYVLLFIPNEAAYVAAVSSAPDLSMEAYRKQIILINPTNLLMALQLTYNLWQSEKQS 317 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 N + I A KLY+K LF + + +G +L +Y +A K+L++GRGN++++ E++R Sbjct: 318 ANVRDIYASAEKLYNKFTLFAESFAKLGDNLQTLTSSYEEAQKRLTTGRGNIISRLESWR 377 Query: 426 GLGVEIKREINPDLAEQAVSQDEE 449 G+ R + L + DE Sbjct: 378 EKGLTPARSMPDALLDATADDDEA 401 >UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VKL2_9BACT Length = 443 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 113/450 (25%), Positives = 231/450 (51%), Gaps = 46/450 (10%) Query: 16 VAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75 +I L+ + Q++ + + ++L ++ + + E L Sbjct: 14 ASIMLLWMKNKSTQEQKNAGEQLAVLRSQLETERKNVDERIAVVKENAL----------- 62 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 LEA+ + + Q+ A+ K R L E+ N+A ++ + S +++ ++ Sbjct: 63 -QQLEAERKHGEQLRDELQKQAEAKNRL-------LQEEVRNMAAQMLDESREKMNTADK 114 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE---------------------- 173 + L++LLSPL+E+L+ F + V ++ + + + Sbjct: 115 ERLDALLSPLKERLEAFNQTVTNNSKENTANKTEIKTTFEEAMKRLHAEQELTIKAMRED 174 Query: 174 ----IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 ++ L++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL +G +Y Q Sbjct: 175 QERAVKELREQTERIGNDAASLTQALKGDSKMQGDWGEMILDKTLEDCGLIQGQQYFLQE 234 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 + ++ + +PD ++ P + VIDAK++L AY+ ED RE L+EH++S++ Sbjct: 235 NYKDKDGNNFRPDAVIVFPNEERAVIDAKVSLTAYQAAIREEDATERERYLKEHVSSIKK 294 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 H+ L K+Y++L + +VLMF+P E + AL P ++ A + +I+++SP+ LL Sbjct: 295 HVDELSAKNYEKLVPG-CIGFVLMFVPYESGYSAALKTDPSILQYAYRKHIIILSPSNLL 353 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 +AL+ +W+ ++N ++I ++++L+DK F + +G +D+ Q ++ +A + Sbjct: 354 MALQLTHTMWQNFRMTKNVEEILHQSNELFDKFVTFAETFVKLGVDIDRLQQDFNRAKGQ 413 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 L+ G+GN++ + E + LG+ K++I L Sbjct: 414 LNEGKGNIVRRLEGLKTLGISPKKQIPESL 443 >UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJN2_FIBSS Length = 482 Score = 298 bits (762), Expect = 4e-79, Method: Composition-based stats. Identities = 124/482 (25%), Positives = 226/482 (46%), Gaps = 34/482 (7%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +I V + A++G+ IG LFA ++Q++A EM E++ + Q+ AE Sbjct: 1 MTIAVAIICAVLGIVIGVLFARNGNSQREAAARQANVEMEKEVAVLRSQLATETVKNAEL 60 Query: 63 ELLNNEV-------------RSLQSINTSLEADLREVTTRMEAA--------QQHADDKI 101 + + + SL + R+E+ Q +++ Sbjct: 61 KENTEKQLEMVKADAEKRIADERAAAAKSLADEKEASAKRLESMKLDMERVHQSSLNEQN 120 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + QRL Q +N + + +++ E ++ L+SPL+E + + + D+ Sbjct: 121 ARFTEMSQRLYAQAKNSTEEMLKQREKQISESGHATMEQLVSPLKETIAKMEKTMNDTTR 180 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 + + +L ++ N + A L RA K D+K QG+WGE VL VLE+ GL E Sbjct: 181 AQTEANSSLKEVLKQSIDANDKTKNAANELVRAFKHDSKIQGDWGERVLEEVLESLGLEE 240 Query: 222 GYEYETQVSIEN---------DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 G ++ Q ++ + + ++PDVIV L K+VV+D+K+++ A+ Y AE+ Sbjct: 241 GKHFDVQATLRDANGNVVRAEGNNAMLRPDVIVHLDPYKEVVVDSKVSMAAFMDYMQAEN 300 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQL--PGLRTLDYVLMFIPVEPAFLLALDRQPE 330 R+ L++HI S+R H+ L KDY +T+D+V+MF+P A AL Sbjct: 301 PDERKVLLKKHIESLRKHVNELSVKDYSSYVKAPKKTMDFVVMFVPRAAALWTALAEDHA 360 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L +A + N+ + +L LR + WR Q++N Q++ + A+++ ++ +F+ +M Sbjct: 361 LWRDAFEKNVYIADEQSLYAMLRMVKMTWRQVQQAQNQQKVFELANEVLKRVGIFVKNMD 420 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE--IKREINPDLAEQAVSQDE 448 IG +L KAQ+ Y + M KL +++ LG + K + PD+ + + E Sbjct: 421 EIGAALGKAQEAYNKGMAKLDDKGQSIVQSCRKLERLGAKQDSKNPLPPDVDAIEMQEIE 480 Query: 449 EY 450 E Sbjct: 481 EM 482 >UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8GYE2_CAUCN Length = 429 Score = 298 bits (762), Expect = 5e-79, Method: Composition-based stats. Identities = 131/400 (32%), Positives = 199/400 (49%), Gaps = 16/400 (4%) Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 + Q EA +T R+ A++ Q + + Q AN I E +R Sbjct: 27 AAQRRAAKAEAQAWLLTERLAQAEERHRLLEDQSATQIELIKAQAAQSANAIAEQLIKRA 86 Query: 131 DEQNR-------QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 DE + L + L P+ E L F QV A+E L +I L + + Sbjct: 87 DENAKSRERLAEARLEAQLKPVAETLAKFEAQVTAVEKARAEETGGLKAQITALLEASTA 146 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 EA L+ AL+ QG WGE L VLEA+GL ++++ Q S++++ R +PDV Sbjct: 147 TQAEARKLSAALRRGAGVQGRWGEQTLRNVLEAAGLNSRFDFQEQFSVDSEEGRR-RPDV 205 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ-QL 302 V LP G VIDAK +L A+ +A D+ RE+A+ H SVR H++ L K Y Q Sbjct: 206 KVTLPGGGVFVIDAKCSLNAFLEAQDATDEVLREAAMARHAQSVRTHMQGLSSKAYWDQF 265 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 G + D+V MF+P + ALDR PEL+ EA+ ++LV+PTTL + +A WR E Sbjct: 266 AGEGSPDFVAMFVPGDGFLAAALDRLPELMAEAMDRRVVLVTPTTLFALCKAVAYGWRAE 325 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q++NA +I + +LY ++ + A+G++L+ A Y Q + L S VL QA Sbjct: 326 DQAKNAARIVEVGRELYKRVSVMGAHAGAMGKALESAVGKYNQFVGSLES---QVLTQAR 382 Query: 423 AFRGLGVEIK-REIN-PDLAEQAVSQDEEYRLRSVPEQPN 460 F L V+ + +EI P + +QAV +L++V + P Sbjct: 383 RFEDLSVDHEGKEIPEPPMVDQAVR--PLTKLKAVGQSPT 420 >UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LE03_GORB4 Length = 391 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 6/321 (1%) Query: 111 LSEQFENLANRIF---EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 L + E++A + E + RR +N ++ PLR L +++ Sbjct: 36 LRQSREDVAQSLSWATEDAARRQSSAIGSQVNHIVEPLRSTLTALADELRRVEHNRVGAY 95 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 LT ++R + + + + L AL + +G WGE+ L RV+E +G+ ++ T Sbjct: 96 AGLTEQMRGMHAASMALGDQTRQLANALHS-SHARGRWGEIALERVVELAGMTRHCDFST 154 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 QVS ++ + ++PD++V L G+ +V+DAK+ L AY R D + L +H +V Sbjct: 155 QVSAQSATGT-VRPDLLVHLAGGRTIVVDAKVPLDAYLRAAEVTDRAEAQRLLADHARAV 213 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 R+HI L K Y T + V++F+P E A ELI N+++ +PTT Sbjct: 214 RSHITKLSAKAYWTAFD-NTPEMVVLFLPAEAVLEAAARADAELIEYGFGRNVVIATPTT 272 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ LRT+A WR++ +R+A I + L+ ++ + + ++G SL K ++Y A+ Sbjct: 273 LVALLRTVALGWRHDAMARDAAVIHELGLTLHQRLHSVLGHLESVGSSLRKTVESYNSAV 332 Query: 408 KKLSSGRGNVLAQAEAFRGLG 428 + + G + GLG Sbjct: 333 GVVENRLGVTARRLAELEGLG 353 >UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RPQ7_CAMFF Length = 435 Score = 296 bits (757), Expect = 2e-78, Method: Composition-based stats. Identities = 113/446 (25%), Positives = 204/446 (45%), Gaps = 19/446 (4%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+ I++ VI + G I + F K E + E + + ++ + Sbjct: 1 MEIYILLSLVIFVFGALIFYQFLKIDKF--KFELKLQNERFLNLQIKFDENRSELLNLEN 58 Query: 61 ECELLNNEVRSLQSINTSLEADLRE---VTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 + + LN + + L+ L E + ++A Q D K R+ + + Sbjct: 59 KIQNLNEQKMEGEIEKAKLKTKLDEQINLNLELKARQDELDLKTREYFELKT------KE 112 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 ++ + + + + E +++ L +L++PL+ +++ +++ + NL Sbjct: 113 MSQHLLNLNTKSLGENSQKILENLINPLKNEIEKYQK-------ESVNTSTIFKANFENL 165 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + + +A NL AL G+ K GNWGE+ L VLEASGL G Y QV ++ + Sbjct: 166 KTETKNIISQAKNLADALNGNKKVLGNWGEIQLDSVLEASGLINGKNYFKQVGYKDKDGN 225 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 + DV+V + K +ID+K +LV Y YFNA+ D + + ++ HI LL K Sbjct: 226 QKYLDVVVDFGESKKAIIDSKCSLVNYNAYFNAQSDEQKNQFAKALAGDIKKHIELLSSK 285 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 +YQ +T +Y+ MF+P + F AL++ + A + I + +P TLL+AL+T+ Sbjct: 286 EYQDY-DTKTYEYIFMFVPNDSIFYTALNQDSTIYEYAYEKGIFITTPLTLLMALKTVYI 344 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 WR NA +I A ++YDK R+F + + L+ + L G GN+ Sbjct: 345 CWRNLKSDENAMRILSEAGRMYDKFRVFTEQFDKLESQLNTVIKTVSSSKTTLYDGSGNL 404 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQA 443 L++ E + LG + + I+ E A Sbjct: 405 LSRFENLKKLGAKTNKNISKIYNESA 430 >UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKG7_DESAH Length = 395 Score = 294 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 84/337 (24%), Positives = 173/337 (51%), Gaps = 11/337 (3%) Query: 105 INSEQRLSEQFENLANRIF----EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 + Q S QF +LA+ F + + + +D + + + S + P+R+ LD + ++ Sbjct: 49 AQALQANSTQFLDLADHYFAGYIKEARKELDIKGDEMIRS-VDPVRQALDRYENRLGQME 107 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 + + +LT ++ + + + +E NL ++L+ +G WGE+ L +V E +G+ Sbjct: 108 LERERAFGSLTAQLVEMARTQESLQRETGNLVKSLRL-PHVRGRWGEITLRKVAELAGMA 166 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 E ++ Q+ + + ++PD++V LP +++V+D+K+ L AY + R++ L Sbjct: 167 EQCDFTEQLQKGSGKGA-LRPDMVVHLPGDRNIVVDSKVPLAAYLDALESTTKEARKAGL 225 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 H V HI L K+Y + T ++V++FIP E F AL ++P+LI A++ + Sbjct: 226 LNHARQVLAHINALSAKEYWR-QFTPTPEFVVLFIPGENFFSAALAQKPDLIETAIQKGV 284 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 +L +P TL+ L++++ W NA++I S+L+ ++ L + M+ +G+ +++A Sbjct: 285 ILATPATLISLLKSVSYGWSQAKSHENAKEITRLGSELFQRISLMAESMNLLGKDIERAA 344 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 Y + + + V+ A+ LG+ R I Sbjct: 345 STYNKTVGTIE---RRVMVSAKKLSNLGIAEDRNIPE 378 >UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=Wolbachia RepID=Q5GRS5_WOLTR Length = 449 Score = 294 bits (753), Expect = 5e-78, Method: Composition-based stats. Identities = 92/397 (23%), Positives = 191/397 (48%), Gaps = 31/397 (7%) Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 E + ++ L+ E+ ++ ++ +I + +E+RL+ F+ Sbjct: 42 KLERELQETRQILQGKDKEIVDLKVSNAELEVTLQKEREEKKKEIELLAKAEERLTNTFK 101 Query: 117 NLANRIFEHSNRRVD------------------EQNRQSLNSLLSPLREQLDGFRRQVQD 158 L+ + +N ++ + ++N +++P++E+L+ F ++++ Sbjct: 102 ALSLDALQTNNNNFLNLAKEVIDSKLKETESNFKKRQATINEVVTPIKEKLEKFDSEIRE 161 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 + L +I L +L AL G +G WGE+ L RV+E +G Sbjct: 162 LEKERVGAYEGLKEQIGALMNQ-------TSSLANAL-GKPHIRGKWGEIQLRRVVEMAG 213 Query: 219 LREGYEYETQVSIEN-DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRE 277 + E ++ TQ S+ + + + ++PD+I+++P GK ++IDAK+ L +Y + D ++ Sbjct: 214 MVEYCDFFTQPSVIDKNKDNLLRPDLIIKMPSGKQIIIDAKVPLDSYLDAVSQNDLRIQK 273 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK 337 L++H +++ HI LGRK+Y T + V++F+ E F AL+ +P LI ++ Sbjct: 274 EKLKDHSLAIKKHINDLGRKEYWN-QFENTPELVVLFLTGEGVFSAALEYEPALIEIGVE 332 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 +++ +P TL+ LR IA W+ E + +A++I++ LY+++ ++ + +SL Sbjct: 333 KKVIIATPITLIALLRAIAYGWKQEMIAESAKKISELGHILYERICTMGENFDNLRKSLK 392 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 A D+Y + L + V A F LG+ K + Sbjct: 393 SAVDHYNKTAGSLET---RVFPAAREFNKLGIYTKNK 426 >UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas RepID=Q1N9P4_9SPHN Length = 493 Score = 294 bits (752), Expect = 6e-78, Method: Composition-based stats. Identities = 118/456 (25%), Positives = 205/456 (44%), Gaps = 27/456 (5%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 AI L + Q A Q+A EE AA Q++ Q + A + ++++Q+ Sbjct: 52 AIAELAVEKERVAQAAVQIARHEEAHI---AAAQRLDQVQAVAA------DRLQTVQAER 102 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD----- 131 DL + + ++A + + +I + +++ +LS QF + R+ E + + Sbjct: 103 EVALRDLAALQSDIQARTRAFEQQITALKDAKDQLSAQFSEIGGRLLETAQTQFLTRADQ 162 Query: 132 ------EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 E++ L +LLSP+ L + + L I + Q+ Sbjct: 163 RFAQAHEKSEAQLKTLLSPVETTLKRYEEGLARVEKDRVGSYAELREAIAMVHAGQGQVR 222 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 +E L AL+ KT+G WGE ++E +GL +++ +VS+ + R++PD I+ Sbjct: 223 EETAKLVNALRAAPKTRGRWGEQQFKNLIETAGLSPFVDFQEEVSVTVEDG-RLRPDFII 281 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP + +V+D K +L AY + D TRE L +H +VR H LGRK Y + Sbjct: 282 RLPGDQQLVVDVKCSLEAYLNAVESVDGPTRERFLVDHARAVRTHADALGRKAYWE-QFA 340 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 + D+V+M++P + AL+ EL A +N +++ P T L RT+A WR Sbjct: 341 KAPDFVIMYVPGDNFVTAALEADMELWERAARNRVIICGPATFLPLARTLAGHWRQAKLQ 400 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 A+++AD +LY+++ + +G L A DNY + + S +VL FR Sbjct: 401 DQAKEVADLGKQLYERLATAATHLKRLGSGLSSAVDNYNKFVG---SFDRSVLPAGRRFR 457 Query: 426 GLGVEI--KREINPDLAEQAVSQDEEYRLRSVPEQP 459 L VE K + E + + R++P Sbjct: 458 DLNVETGGKDIEAVEPLELLIRDSQSDEARALPTAE 493 >UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16 Tax=Bifidobacteriaceae RepID=D2Q6M6_9BIFI Length = 447 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 99/435 (22%), Positives = 195/435 (44%), Gaps = 24/435 (5%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 + A + + Q E R L V ++ + L L + +++ Sbjct: 28 RSRGQDMARDARTADLNEAKAQIEDGRRRIGDLTTSVAQYRTQSEGLNQQLTYLKSQLAQ 87 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 AQ +I + +E+ + + R ++ + L+P+++ LD Sbjct: 88 AQSAEQTRIEREREKAAAEAERRQTESERQLREQSKVLSA---------LAPVQKNLDAL 138 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 + +V +E L +++ L + A++ +E +L+ AL+ +N+ +G WGE L Sbjct: 139 QEKVSQIEEGRKREMGALGEQLKGLGEQQARLDRETSSLSAALR-NNRVRGAWGEAQLRN 197 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 ++E++GL E +++TQV + + +PD+++ +P GK + IDAK Y+R D Sbjct: 198 IVESAGLLEHVDFDTQVVVTDADGHTQRPDMVIHMPGGKTIPIDAKAPYADYQRACEIPD 257 Query: 273 DYTRESA------LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 ++E L+ H +VR H+++LG K Y D+V+ FIP E AL+ Sbjct: 258 TASQEELTRKADLLRAHAKAVREHVKVLGDKAYWNAF-SDAPDFVIAFIPNESLLQAALE 316 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P L+ +A + L SP TL L+++A W+ + + +A+ + D + +LY++ + Sbjct: 317 TDPTLMDDAFARKVALTSPITLWAVLKSVAYAWQQQSLTDDAKMLFDLSRELYERFAVLG 376 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + + +G ++ + Y L S VL A + V+ + I + E S+ Sbjct: 377 ERATKLGTAITRTVGAYNAFASSLES---RVLVTARKLQR--VDQGKVI--ESVEIIPSE 429 Query: 447 DEEYRLRSVPEQPND 461 + R + PE +D Sbjct: 430 KADIRELTAPETVDD 444 >UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SFL0_NOCSJ Length = 374 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 15/322 (4%) Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 LD Q+ A + ++ LQ+ E +L+ AL+ + +G WGE+ Sbjct: 66 LDRLSDQMHHLDRARATWQGHFDTQVDQLQR-------ETRSLSTALR-KPQVRGRWGEL 117 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 L R +E +GL + ++ QV +++ AR +PD++V L G+ VV+DAK+ L AY Sbjct: 118 HLRRAVELAGLVDRCDFSEQVRLDDGAR---RPDLVVHLVGGRRVVVDAKVPLDAYLDAT 174 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 + +D+ + L+ H+ +R H+ LG K Y + + ++V++F+P E AL+ Sbjct: 175 STDDEEEHRAHLRRHVTQLRTHVEALGSKQYWRSLE-ESPEFVVLFVPAESFLAAALETD 233 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 P LI A ++L +PTTL+ LRT+A+ W +E + A++I +L+ ++ Sbjct: 234 PTLIEHAAARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGRLLGMTGH 293 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 + +G+SL+ A +Y Q + L S VL F L V + +P + Sbjct: 294 LDQLGRSLNAAVGHYNQTVGSLES---RVLVSGRRFADLSVTDEELPSPRQIDATARSIS 350 Query: 449 EYRLRSVPEQPNDEAYQRDDEY 470 LRSV + D+ D Sbjct: 351 PSGLRSVERRAADDDPGADHTV 372 >UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN95_9ACTO Length = 409 Score = 290 bits (742), Expect = 9e-77, Method: Composition-based stats. Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 20/367 (5%) Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT 169 R++ + + +R+ E + R + S +++ E LD Q+ A + Sbjct: 38 RITAERDAAEDRVVELTQERHTVGQQMSGQAVVK---EALDRLHAQLNQLEKGRAAWQSQ 94 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L ++ ++ + +E +L+ AL+ + +G WGE+ L R +E +G+ ++ Q Sbjct: 95 LHQQVNEVRMSGEALRRETASLSTALR-KPQVRGRWGELHLRRTVELAGMVAHCDFTEQT 153 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 S D ++PD++VRL +GK++V+D+K+ L A+ ++D RE L+ H +R Sbjct: 154 STATDDG-MLRPDLVVRLAEGKNLVVDSKVPLAAFLEAAESDDADFREERLRAHARHLRT 212 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 H+ L K Y T ++V++F+P E ALD +P L+ A + ++L +PTTL+ Sbjct: 213 HVDQLSAKSYWARLPS-TPEFVILFVPGESFLSAALDVEPSLLEYAAERRVILATPTTLI 271 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LR A W + +AQQ+ + +LY+++ D + +G+SL A D Y + + Sbjct: 272 ATLRAAAYAWNQSALTESAQQVFELGRELYERLSTMGDHLGRVGRSLTSAVDAYNRTVGS 331 Query: 410 LSSGRGNVLAQAEAFRGLGV---------EIKREINPDLAEQAVSQDEEYR--LRSVPEQ 458 S V A R L V I+ + P A + ++ DE R +P Sbjct: 332 FES---RVFTTARKLRDLHVTEAELAAMETIEASVRPLAAPELLALDEPDDATRRWIPTP 388 Query: 459 PNDEAYQ 465 P D + Sbjct: 389 PVDRSRP 395 >UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacterium RepID=C3PFD8_CORA7 Length = 360 Score = 288 bits (736), Expect = 4e-76, Method: Composition-based stats. Identities = 87/322 (27%), Positives = 161/322 (50%), Gaps = 9/322 (2%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L+ + + + E + Q RQ+ L+PL + +D Q+Q+ A L Sbjct: 27 LARAYSAQSAQPSEEHRALQESQRRQA---ELAPLEKAMDRLGLQIQEIEEDRATSLAAL 83 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 + +++ + + + +++ L AL+ N +G WGEV L RV+E G+R+ ++++QVS Sbjct: 84 SSQVQAVTRTSTRLSDRTDKLVGALRSPN-VRGRWGEVQLERVVELGGMRKHVDFDSQVS 142 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 S ++PD+++ L G+ +V+DAK+ L AY ED R L+ H +R+H Sbjct: 143 ARI-NGSLVRPDLVIHLAGGRSIVVDAKVPLSAYLDAMETEDPEERAGYLRRHAHLMRSH 201 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 ++ L KDY + T +V++F+P + AL EL+ A + N ++ +P+TL Sbjct: 202 VQALASKDYIEAFSP-TPQFVVLFVPADTFVDAALSIDAELLEFAFERNAVIATPSTLFA 260 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 LRT+A W++E S A+++ LY ++ + +G+ L++A + Y ++ L Sbjct: 261 LLRTVAVSWQHEEISDKAREVQRLGRDLYTRLNTLNEHYDKVGRGLERAVEAYNASLASL 320 Query: 411 SSGRGNVLAQAEAFRGLGVEIK 432 S G A + L V + Sbjct: 321 DSRVG---VTARRLKDLDVPAR 339 >UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=Propionibacterium acnes RepID=Q6AA88_PROAC Length = 406 Score = 287 bits (734), Expect = 7e-76, Method: Composition-based stats. Identities = 110/465 (23%), Positives = 198/465 (42%), Gaps = 69/465 (14%) Query: 3 FSIMVYAVIAL-VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE 61 + +V +I L +GVA+GWL A + +Q+ AE + Sbjct: 1 MTNIVVGLIGLAIGVALGWLIAQLRTSQRIAEATSAA----------------------- 37 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 R T R+EAA++ A D L+ QF+ L+ + Sbjct: 38 ----------------------RVATERLEAAEKIATD--------RDALATQFKALSAQ 67 Query: 122 IFEHSNRRVDEQNRQSLNS---LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 N R + +++++ LL+P+ L+ R++ + + +L ++ + Sbjct: 68 SMADQNERATQSAQRTMSDAQRLLAPVSLALERLDRRLAEVEQERTDMTASLREQVAGVS 127 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + +E +L AL+ + +G WGE+ L R E +G+ E +++T + Sbjct: 128 TAGESLRKETASLVAALR-KPQIRGAWGEMQLQRTAEVAGMLEHCDFQT-QQTTTAQGAP 185 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKD 298 +PD+ V+L + + +DAK L A+ +D ++ + VR HI L K Sbjct: 186 QRPDMTVKLSGRRCIHVDAKTPLAAFLEAAQCDDAEEYDAQMARFARHVRTHIDQLSAKG 245 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 Y + L + ++V+ F+P + AL P+L A + I+L SP+ L+ LRT+A Sbjct: 246 YWRT-DLDSPEFVVCFLPSDALLQAALQEIPDLHEYANRRGIVLASPSVLIPMLRTVALA 304 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 WR E +R+A ++A L+ ++ ++ +G+SL Y A+ L + VL Sbjct: 305 WRQEAVARSATEVAALGRDLHKRLGTLAGNLDKMGRSLTSTVRAYNSALGSLET---RVL 361 Query: 419 AQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 QA F LGV +P E+AV R + PE ++ Sbjct: 362 VQARRFEHLGVTADDIASPAPIEEAV------RPLTSPELTENQT 400 >UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AV49_TSUPA Length = 361 Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats. Identities = 87/329 (26%), Positives = 151/329 (45%), Gaps = 19/329 (5%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 + ++L+PLR+ LD + + L +I + + + + E L A+K Sbjct: 48 VGAMLAPLRQTLDALGHEFAVAERSRVAAFAGLREQIGTVARTSEALRAETATLRSAMKS 107 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDA 257 +G WGE+ L RV+E +GL ++ TQV+ R++PDV+V L G+D+V+DA Sbjct: 108 ST-VRGRWGELQLERVVELAGLSRHCDFSTQVAGVVGDD-RVRPDVVVHLAGGRDLVVDA 165 Query: 258 KMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPV 317 K+ L AY + A + L +H R+H+ L + Y G + + V+MF+P Sbjct: 166 KVPLDAYLQVLEAP-PAEHAALLADHARRFRSHVVQLAGRRYWDAVG--SPELVVMFVPA 222 Query: 318 EPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 E AL P+L+ AL N++L +PTTL+ LR +A WR +A++I + Sbjct: 223 EAFLDAALQVDPDLLEFALNRNVVLATPTTLVAMLRAVALAWRQHALGEDAERIHALGRE 282 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 L +++ + + S++G +L +A D + + S V A L Sbjct: 283 LSERLDVLNNHFSSLGSALTRAVDAFNTTVG---SYNARVGVTARRLADLASMPD----- 334 Query: 438 DLAEQAVSQDEEYRLRSVPEQPNDEAYQR 466 ++D+ L + P A+ R Sbjct: 335 ------GARDDHPGLDAAPRAVPHGAHSR 357 >UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VT69_9CORY Length = 355 Score = 284 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 83/285 (29%), Positives = 142/285 (49%), Gaps = 6/285 (2%) Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 + L + +DG ++ A+ L E+++L Q + +A + L L G + Sbjct: 43 NQLADAMDGISSRLHALDVSRAETSARLNQEMQHLTQTSLALAGKTDKLLTTL-GGPGLR 101 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE+ L RV+E SG+ + +++TQVS + + SR++PD++V L G+D+V+D+K+ L Sbjct: 102 GQWGEMQLQRVVELSGMIKHCDFDTQVSTTSHS-SRVRPDLVVHLAGGRDIVVDSKVPLS 160 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY D + L+ H +R H+ L KDY + T ++V+MFIP + Sbjct: 161 AYTDALEVNDSEEQAGYLRRHAYLMRQHVTQLSAKDYARGFA-HTPEFVVMFIPADSFLD 219 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL EL+ A NI++ +P+TL+ LRT+A W+ A +I ++LY ++ Sbjct: 220 AALKCDSELLEFAFSRNIIIATPSTLMALLRTVALGWQSADVEAKAGEIHALGTQLYRRL 279 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 + + +G LDK + Y + + S V A L Sbjct: 280 ATLNEHYAKLGSLLDKTVEQYNVMIGSMES---RVAVTARRLAEL 321 >UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8X6_9ACTN Length = 437 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 187/401 (46%), Gaps = 14/401 (3%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN-R 128 LQ+ + +A + E+ ++ A + ++ + +++LS +N R+ + SN + Sbjct: 43 EKLQTAINTHQAQMLELHSQNSALTAQNAELNNRLSDIKEQLSLVQQNEQLRLTKDSNEQ 102 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + +S+ P++ +LD + +V ++ L +++ L ++ Sbjct: 103 KHKLLVNESVIKAFEPVKAKLDDLQHKVMYMEEARKRDLGALDEQLKGLDSQQRRLDSVT 162 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L+ AL ++ +G WGEV L ++EA+GL E +++TQV + +PD+I+ LP Sbjct: 163 SSLSSALC-NSSVRGAWGEVQLKNIVEAAGLTEHIDFDTQVKLSTSDDKSFRPDMIIHLP 221 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYT------RESALQEHIASVRNHIRLLGRKDYQQL 302 K + ID+K Y R +D R L+ H A +R HI L +K Y +L Sbjct: 222 GNKTIPIDSKAPYNNYRRACEIDDSADEEALRRRTELLKAHAADLRGHINALSKKSYWEL 281 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 D+V+ FIP E AL +L+T A + L SP TL L+++A W + Sbjct: 282 FETN-PDFVIAFIPNEALLQAALAVDEDLLTYAFSKKVALTSPVTLWAVLKSVACAWHQQ 340 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 S NA+++ + + +L +++ D +SA+G++L A NY + L + VLA A Sbjct: 341 ELSDNARELFNLSQELCERLATLGDKVSAVGKNLSSAVKNYNSMVGTLET---RVLASAR 397 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 + L + + +L + + E + +++A Sbjct: 398 KMKQL--DGTKLTVQELDSEKTNVRELSASEFISTGASEDA 436 >UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae RepID=B4WDX5_9CAUL Length = 404 Score = 282 bits (721), Expect = 2e-74, Method: Composition-based stats. Identities = 107/369 (28%), Positives = 184/369 (49%), Gaps = 10/369 (2%) Query: 73 QSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE 132 Q +L A L + E+ + Q S Q +++Q + A F D+ Sbjct: 27 QKAQGALSAALARIDLVEESRVTMGELLKAQAAQSAQVVADQMVSRATETFRAQ----DQ 82 Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 R+ + + L P+ + L F+ V A+E L ++ L ++ EA LT Sbjct: 83 LARERMAAQLKPVADTLTKFQEHVAALEKTRAEETGGLKEQLTQLMAASSATRDEARKLT 142 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 AL+G+ +G WGE VLEA+G+ +++ Q S +D + +PD +VRLP G Sbjct: 143 EALRGNTGRRGRWGEQTCRNVLEAAGMAGRFDFTEQTSSADDEGRQNRPDFLVRLPGGGL 202 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 VIDAK+ L A++ E+ R L+ AS++ H+R L K YQ + D+V+ Sbjct: 203 FVIDAKVPL-AFDDEEGDEEARARSVGLR-IAASLKTHVRQLSSKAYQDQFKP-SPDFVV 259 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 +F+P + ALD P+L+++A+++ +++ +P+TL + +A WR E Q+ NA ++A Sbjct: 260 LFVPGDSFLSTALDHAPDLLSDAMESRVVIATPSTLFALCKAVAYGWRAEEQAANADKVA 319 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK 432 +LY ++ + SA+G++LD+A Y Q + L S V+ A F L V+ + Sbjct: 320 ALGRELYKRLSVMGGHASAVGRALDQAVGKYNQFVGSLES---QVMVSARRFEDLQVDHE 376 Query: 433 REINPDLAE 441 + P LA+ Sbjct: 377 GKEIPALAQ 385 >UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD1_ELUMP Length = 402 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 108/431 (25%), Positives = 197/431 (45%), Gaps = 56/431 (12%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 S+ + +I L+ VA F Y A +KA A ++ SE + E Sbjct: 1 MSVWILVLIILI-VAAACFFTGYLLADKKAA-----------FKTASLEVKLSEREQNEE 48 Query: 63 ELLNN-EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 L+N + S +++NT+ ++ L T +E Q Sbjct: 49 RLVNTFKALSAEALNTNNKSFLELAKTTLEKYQ--------------------------- 81 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 S + E+ +Q++NSL+ P++E L F ++ + + L ++ Sbjct: 82 ---ESAKGDLEKRQQAINSLVEPVKETLGKFEVKIGEIEKERKGAYEGLKEQM------- 131 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 + L+ AL + ++G WGE+ L +++E +G+ ++ Q S+ R++P Sbjct: 132 HMLLGTTQTLSNALTSSS-SRGRWGELQLKKIVELAGMMNHADFVEQSSVSTQDG-RLRP 189 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D+IV+LP G ++V+D+K + Y +D R + +E A +++HI+ L K Y + Sbjct: 190 DLIVKLPGGSNIVVDSKAPVSKYLEAVELKDPSARHAKFKEFAAQIKDHIKSLSSKAYWE 249 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 T D+V++FIP + F AL+ +P LI A+K +++ +PTTL+ L+ IA WR Sbjct: 250 QFSP-TPDFVVLFIPGDSYFAAALEAEPALIENAVKEKVIVATPTTLISLLKAIAYGWRN 308 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 ++A++IA +LY+++ + IG L+ A +Y Q ++ S VL A Sbjct: 309 VSVEQDAKEIAALGKELYERIATMSEHFYKIGSGLENATKSYNQTLRSYES---RVLVSA 365 Query: 422 EAFRGLGVEIK 432 F+ V K Sbjct: 366 RRFKDFKVSDK 376 >UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=Chlamydiaceae RepID=RMUC_CHLTR Length = 427 Score = 276 bits (707), Expect = 9e-73, Method: Composition-based stats. Identities = 95/407 (23%), Positives = 186/407 (45%), Gaps = 32/407 (7%) Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 ++ ++ I LE + ++ + + + M +L+ + A + Sbjct: 33 KIFTKKLSRQHEIIRDLEHSKAILQMSLDTRRS----QEQLMEEFSHKLTSVSQAFARDM 88 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 S E+ Q++ S+L+P+ L F++ +++ K+A++R L ++ L Sbjct: 89 KTESQEFFSEKT-QAITSVLAPVHNTLSAFKQNLENFETKQAEDRGALKEQLSQLLTAEQ 147 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 ++ +E LT LK ++G WGE+ L R+LE SG+ + +Y TQ + + S + D Sbjct: 148 KLERETQALTNILKH-PGSRGRWGEIQLERILEISGMLKYCDYSTQTV--DSSESSSRAD 204 Query: 243 VIVRLPQGKDVVIDAKMTL-VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 +++RLPQ + +VIDAK Y +A+ + +++HI+ L K Y Sbjct: 205 IVIRLPQNRSLVIDAKTPFSEEYLTDNHADPTD--------LVKKIKDHIKTLKTKSYWD 256 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 ++ ++V++F+P E F A+ PEL+ A ++N++L SP TL+ L+T+ ++W+ Sbjct: 257 -KFEQSPEFVILFLPGESLFNDAIRCAPELMDYAGQSNVILSSPVTLMALLKTVTHVWKQ 315 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E+ ++I LY +M D +G+ L +A +Y LS+ VL Sbjct: 316 ENLQNQIREIGQLGKDLYQRMHKLFDHFHKVGKHLGQAVHSYNDMSSSLSA---RVLPIL 372 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 F L +L+ + ++ ++P P Y +D Sbjct: 373 RTFDKL----------ELSSSHNKIEALSQVSTLPHSPKV-PYPEND 408 >UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEF9 Length = 394 Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats. Identities = 98/356 (27%), Positives = 170/356 (47%), Gaps = 21/356 (5%) Query: 109 QRLSEQFENLANRIFEHSNRRV--DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 +RL+ +RI + + D Q + + + PL ++ + +Q + ++ Sbjct: 38 ERLTRA--ETTSRILTNRTEDLEADAQMAGEITAAIGPLAASVNHLQENLQSQDRTQLEQ 95 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 L +I +L Q N ++ + +L AL + +G+WGEV L R++E +GL ++E Sbjct: 96 ITRLNTQIGHLSQQNLRLQESTGSLASALNSTTQ-RGDWGEVQLKRIVEYAGLLPHVDFE 154 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 TQVS R +PD+ V LP G ++IDAK L A +A D+ H + Sbjct: 155 TQVS-SVRDGKRHRPDMTVNLPGGGTIIIDAKTPLSARMGDADASDED--------HARA 205 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 + HI L K+Y + D+V+ F+P + A P++I AL N++L SP Sbjct: 206 LLRHIDALASKEYWKSFD-TAPDFVVCFVPTDGLLSSAASTYPKMIDHALGKNVVLASPA 264 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TLLV L+T+A WR S +A ++ ++LY+++ + ++ +G SLD++ ++Y + Sbjct: 265 TLLVLLKTVALNWRQADMSTSAAEVLKLGTELYERIGTLVTHVTRMGSSLDRSVEDYNRF 324 Query: 407 MKKLSSGRGNVLAQAEAFRGLGV---EIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 + L S L A F G+ E+ D + VS +E R R + P Sbjct: 325 VSSLES---RFLVTARKFPSTGIVATELDAVAELDSRSRGVSAEELTRPRISGQDP 377 >UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRF3_9PROT Length = 467 Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats. Identities = 104/400 (26%), Positives = 189/400 (47%), Gaps = 13/400 (3%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 L ER+ + ++ + R + + + + L+A L E + + + Sbjct: 34 LRERDALRQAYDRCSRERDELLSARDDRDRERSRREEAERREAVLQARLEERERQFQQER 93 Query: 95 QHADDKIRQMINSEQR------LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 +D+ R + R L E N + E +S+ LL P+RE Sbjct: 94 DGFEDRFRSLSQRLLREASDGLLREAKANFDQQQLRAKAEA--EGYARSVGDLLKPMRET 151 Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 L + + +++ + + R L+ EI++L + + EA L+ ALK KT+G WGE Sbjct: 152 LSRYEQGLKELREDQVKARGHLSGEIQSLAAQTSAVQAEARTLSAALKAGPKTRGRWGET 211 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 L V+E +G+ +++ Q + ++ R QPD++VRLP + V ID+K + + Sbjct: 212 TLRNVVEMTGMSPYCDFDEQFGVVDEDGRRKQPDMVVRLPGERMVAIDSKAPMAEWFTAV 271 Query: 269 NAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQ-LPGLRTLDYVLMFIPVEPAFLLALD 326 + D+ R++A H ++ H++ L KDY L LD+V++F+P E F A+ Sbjct: 272 ESGGDEDRRDAAHAAHAKALWTHVQQLAGKDYAAALKKDDALDFVILFVPAESFFTAAIG 331 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 +P L EA++ NI++ +P TL+ L++IA WR + NA+++A A LYD +R Sbjct: 332 ARPSLFQEAVEKNIVIATPATLVAILKSIAQSWRQQKAGDNAREVAALARDLYDSLRGTS 391 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 + +G+S+ + +Y + + S VL +A F Sbjct: 392 TYLLQLGKSVAQTVKHYDSLVGNMES---RVLPRARRFAD 428 >UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMP6_9BACT Length = 472 Score = 273 bits (698), Expect = 9e-72, Method: Composition-based stats. Identities = 113/448 (25%), Positives = 208/448 (46%), Gaps = 26/448 (5%) Query: 4 SIMVYAVIALVGVA----IGWLFASYQHAQQKAEQLAERE------EMVAELSAAKQQIT 53 + + V L+GVA IGWL S + A + E E + EL+ ++Q+T Sbjct: 19 PVTLLIVGLLIGVALGCVIGWLAGSRRSAAAPQDARLENELRQQLSQRETELARQREQLT 78 Query: 54 QSEHWRAECELLNNEVRSLQSINTSL-EADLREVTTRMEAAQQHADDKIRQM-INSEQRL 111 + A E + L + + E L+E + A + + + ++ ++ Sbjct: 79 KLNAACAAAEAQKHSAEKLLAEQREVHEHALKEAKATQDKALGDLRETFKALSADALKQT 138 Query: 112 SEQFENLANRI---FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 +F LAN F+ + + Q ++S+ +L+ PL EQL +++++ S ++ Sbjct: 139 HPEFLRLANETLAKFQETAKGDLSQRQESIKTLVKPLEEQLKIYQQRLAQSETSQSSALG 198 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 + + L + ++ E + L R L + + +G WGE L RV+EA+G+ ++ Q Sbjct: 199 EVKKHLETLALQSQSLSSETLQLRRVLSSN-QARGRWGEETLRRVIEAAGMSAHCDFSEQ 257 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 + + PD+IVRLP + +++DAK+ + + + D R AL H ++ Sbjct: 258 IQSGDSK-----PDLIVRLPGDRIIIVDAKVPEIDFLTAIDNADTIKRTEALAAHAKKLK 312 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 I+ LG +DY + LDYV++F+P E F AL+ +LI A IM+ +P +L Sbjct: 313 ETIKALGDRDYPR-EFPNALDYVVLFLPAESLFSAALEGDHDLIVWAATKRIMIATPASL 371 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + LR+++ W+ QS NA+ IA+ A +LY ++ F + I + L++A + A+ Sbjct: 372 IALLRSVSVSWQQHAQSENARSIAEAAQELYARIAKFTEHFDNIRKGLERANSAFNDAVG 431 Query: 409 KLSSGRGNVLAQAEAFRGL-GVEIKREI 435 V E L G +E+ Sbjct: 432 SYD---RMVRPSGEKLSKLSGGTNGKEL 456 >UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacteria RepID=C7MET8_BRAFD Length = 399 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 84/315 (26%), Positives = 152/315 (48%), Gaps = 7/315 (2%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L L+P+ L R + S L + L Q + LT AL+ Sbjct: 68 LQRTLAPITATLTQLERSLARSEAARIDAEGALRSHLSQLAQRAQSLETGTSALTAALRA 127 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVS-IENDARSRMQPDVIVRLPQGKDVVID 256 +G WGEV L R++EA+G+ E ++ Q+ D +PD++V L + VVID Sbjct: 128 PT-ARGRWGEVQLRRIVEAAGMLEHVDFTEQLPGTRADGEKGQRPDLVVHLAGDRHVVID 186 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK + AY D + + H ++R+H+ ++ K Y + G T ++ ++F+P Sbjct: 187 AKAPMDAYLDATEETDPARAAARRKAHAKALRHHVGVVSSKAYWKALG-DTPEFTVLFVP 245 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 + AL+ PEL+ +A ++++ SP TL+ LRT+A+ WR + +R+A+++ D Sbjct: 246 SDGVLAAALETDPELLEDAFARDVVIASPATLVALLRTVAHTWRTDALNRDAREVLDAGR 305 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR-EI 435 +L+ ++ F + +G+SLD + + +A+ L S V+ A F LG+ + Sbjct: 306 ELHHRLGTFTGHLGKVGRSLDSSVAAFNEAVGSLQS---RVMVTARKFEELGLSGTGLDE 362 Query: 436 NPDLAEQAVSQDEEY 450 L ++A + D+ Sbjct: 363 VEQLTQRARTLDDAQ 377 >UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID=A9WPD8_RENSM Length = 378 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 92/363 (25%), Positives = 171/363 (47%), Gaps = 14/363 (3%) Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 ++ + + + RLSE LA E S+ L+P+ E+L + Sbjct: 26 RRRQANLASDLNDMSDRLSEANAALAAAEAESRLLTAQSGENSSILKALAPVSERLGDVQ 85 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 RQV ++ L+ ++ + + + + Q NL +L+ + +G WGEV L RV Sbjct: 86 RQVTLLERDRVEQYGQLSQQLNDAKDADRLLLQTTQNLASSLRSTS-ARGRWGEVQLRRV 144 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 +E++G+ ++ QV ++ +PD+IVRLP GK++++DAK+ L A+ + A + Sbjct: 145 VESAGMVAHVDFSEQVQ-QSGIDGVQRPDMIVRLPGGKELILDAKVPLSAFLQAQEAGSE 203 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 +L +H +VR+HI L K Y Q + + V+ F+P E AL +L+ Sbjct: 204 RDAAISLNQHAKAVRSHIDALAAKKYWQ-GSPTSPELVICFLPAESILSAALSADAQLLD 262 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 AL ++L SP +LL L+ +A WR + + +A+++ + +S+LY+++ + + +G Sbjct: 263 YALGKGVVLSSPISLLAVLKAVAYSWRQDVLTESAKELFEVSSQLYERLATLGEHVGKLG 322 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 S+ + + Y + L + VL A L +P+ D + R Sbjct: 323 ASIRSSVEKYNTMVGSLEA---RVLPSARRLNLL--------DPESLAAPAQVDVQPRHL 371 Query: 454 SVP 456 S P Sbjct: 372 SAP 374 >UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanobacteria RepID=Q31BJ4_PROM9 Length = 532 Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats. Identities = 91/403 (22%), Positives = 198/403 (49%), Gaps = 9/403 (2%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTR 89 QK + E E+ +L + + + + + + + E + + +L Sbjct: 113 QKEKLSIENGELTEQLKSQEDESLRLDKEKNKLEEIQEINIEEKERLRVERENLSNKFAE 172 Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL 149 ++ + + + + + ++ L QF+ L+ ++ + S + + ++++ P +Q+ Sbjct: 173 IKEQLRSQESQNKFLEQAKADLLTQFQALSGKMLDGSRNALLKTTKETVT---EPFTKQV 229 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 + R+QV++ +++ L L++ + + A LT AL+ N +G WGEV Sbjct: 230 ETLRKQVEELSKDSSEKLGVLAQTTSELKEKSEDVRGAAQQLTSALRSPN-VKGRWGEVN 288 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 L R+LE GL +++ Q++I+ + ++PD ++ +P + +++D+K + +Y Sbjct: 289 LKRILEFVGLINYCDFDEQLNIQTEGGGSLKPDCVITIPGSRKLIVDSKAPIESYLDAIQ 348 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LPGLRTLDYVLMFIPVEPAFLLALDR 327 A D +E L EH+ VR+HI L +KDY + +D V+++IPVE A +AL+R Sbjct: 349 ATDSNIQEKLLTEHLRKVRSHIDQLSKKDYANNLSEIGQVVDGVILYIPVEGALSMALER 408 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 P L+ A + NI+L PT+LL L+ ++ + ++N +I A +L + FI+ Sbjct: 409 DPSLLEYAFEKNIILTFPTSLLAILKGLSMTIQQAEITKNINEIQKNAIELSKRFSNFIE 468 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 ++IG ++ + ++ +A+ S ++ Q + F + + Sbjct: 469 KFNSIGSNITRLNKSFNEAVG---SFERRLMPQGKRFAEMSGQ 508 >UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A518_GEMAT Length = 404 Score = 268 bits (684), Expect = 4e-70, Method: Composition-based stats. Identities = 96/355 (27%), Positives = 171/355 (48%), Gaps = 3/355 (0%) Query: 104 MINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKE 163 M +++ R L ++ H + S++ LL P+RE L + + + + Sbjct: 50 MNDADARARATEVALREQLARHEAEASLTERHGSVSELLVPIRETLSRYDAALGELGRAQ 109 Query: 164 AQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGY 223 A+ +T + + + E L++AL+ + +G WGE+ L RV E +G+ Sbjct: 110 ARVAGQITERLDAVTLAGETLRHETQQLSQALRAPS-VRGQWGELQLRRVCELAGMLAYC 168 Query: 224 EYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 ++E QV++ ++ + +PD+IVRLP + +V+DAK L AY A D+ TR + L H Sbjct: 169 DFEPQVTVRGESGVQ-RPDLIVRLPGDRRIVVDAKAPLSAYLEAMAAGDERTRTARLAAH 227 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 A VR H++ L K Y D+V++F+P E F ALD P L+ AL++ ++L Sbjct: 228 AAQVRAHVQQLAAKRYWAQFD-DAPDFVVLFLPGEAFFAAALDADPSLLEAALEDRVLLA 286 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 +PTTL+ L+ A WR E + A Q+A +L++++ +F + + +G+ L +A +Y Sbjct: 287 TPTTLIALLKAAAYGWRQERVADEAAQVAALGRELHERLSVFDEQLVELGRGLQRAVLSY 346 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 +A+ L + G+ +P L + V E Y + Sbjct: 347 NRAIGSLERRVLVSARKLGTLSGVAAVDGSLTSPSLLDVQVRGSEGYDSEGTEPE 401 >UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinobacteria (class) RepID=A5CT70_CLAM3 Length = 459 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 105/435 (24%), Positives = 199/435 (45%), Gaps = 27/435 (6%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQH----AQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 +++V VI L A+ L S A +A + A A + A ++Q+ ++E Sbjct: 5 IALLVGLVIGLAVGAVVGLAVSRARSGVDAPGRAAEAARLAAAEATVQALREQLDRTERL 64 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 E + + +A RE R++A + H ++I Q + L + + Sbjct: 65 AEE--QVAQTTAQFAERAQTQDALHRE---RLDAQESHLREQIGQQEDRIAELQTRLREI 119 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + + LSP+ E L + +V + + Q+ L+ ++R+ Sbjct: 120 ------QRAEVARTEEDGRVLTALSPVAESLKQVQAKVHELEEQRRQQHGELSEQLRSAT 173 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + ++ A L AL+ ++ T+G WGE L V+EA+GL +++ Q S+ A+ Sbjct: 174 EAEERLRATAETLASALRSNS-TRGVWGETQLRSVVEAAGLIHRVDFDVQTSVST-AQGI 231 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFN------AEDDYTRESALQEHIASVRNHIR 292 +PD++V LP GK++ +DAK AY + R++ +++H+ +VR+HI Sbjct: 232 GRPDMVVHLPGGKNIAVDAKAPFTAYLEASAIPASATGSEGARRDALMKQHVQAVRDHIT 291 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 LG + Y + + + V+ FIP E AL+ P ++ A + L SP TL L Sbjct: 292 ALGSRAYWEGLDA-SPEMVIAFIPSESLVSSALEADPSIMEFAFSRRVALSSPVTLWSVL 350 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 +T+A W+ E + +A+Q+ D + +L+ ++ + ++ +G+SL A +Y + + L Sbjct: 351 KTVAFSWQQEVLTEDAKQLFDLSRELHARLATSGEHIAKLGRSLTGAVGDYNRVVGSLE- 409 Query: 413 GRGNVLAQAEAFRGL 427 VL A L Sbjct: 410 --RQVLPTARRLTRL 422 >UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus torridus RepID=Q6L1W6_PICTO Length = 355 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 158/315 (50%), Gaps = 17/315 (5%) Query: 120 NRIFEHSNRRV-----------DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 +I + +++++ +E+NR + +++ P+ E L +R ++ + + Sbjct: 43 QKILDENSQKLIEKNTEVISNINEKNRLEIKNIMEPVYESLKSYREYIERVENERKLDSG 102 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 +L I NL + ++ + L ALK + +G WGE+ L R++E +G+ ++ Q Sbjct: 103 SLKASIENLSKYLNEIDHDTRALANALK-NPSIRGKWGEITLRRIVEIAGMNPYCDFSEQ 161 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 V+I N+ +PD+++ LP G+ ++ID+K+ L +Y Y + ++ + L+ +I Sbjct: 162 VTINNE----YRPDMVINLPNGRKIIIDSKVPLNSYLNYVDETNEKLKLDHLKRYIDDFN 217 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 NH+R L K Y Q ++D+V+MF+P+E + ++R E + A ++++ +P TL Sbjct: 218 NHVRTLESKRYWQ-NLEGSVDFVIMFLPLESLLSIIMERSRETVENAFSRHVIVSTPVTL 276 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + L T+ W + S N + + ++ F+ D IG +L KA ++Y++ Sbjct: 277 ISLLMTVHAGWNEKELSSNINNLMLKIKDFRSRLDTFMKDYDEIGNNLGKALESYQRTKG 336 Query: 409 KLSSGRGNVLAQAEA 423 L ++ + E Sbjct: 337 SLERRLEPIMREFER 351 >UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campylobacter RepID=B9KDZ1_CAMLR Length = 446 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 107/449 (23%), Positives = 212/449 (47%), Gaps = 21/449 (4%) Query: 8 YAVIALVGVAIGWLFASYQHAQQKAE-QLAEREEMVAELSAAKQQITQSEHWRAECELLN 66 + LV V + +++ ++ +QKA+ + + +V + A ++ ++ +LL+ Sbjct: 4 ILIAFLVVVILAFIWYVFKSQKQKAKMEFLNQNNIVLQNQLANLELEKTTLMEKNSKLLD 63 Query: 67 NEVRSLQSINTSLEADL-REVTTRMEAAQQHADDK-------IRQMINSEQRLSEQFENL 118 ++ L S N +LEA L ++ T+ E H ++ + +I E++ + L Sbjct: 64 EKILYL-SKNEALEAKLAQKEQTQQELLNIHLKERANLKEEYTQTLIKLEEKYKQSLAEL 122 Query: 119 ANRI---FEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEI 174 + + N V QN+ N + E++ ++ V++ + +L I Sbjct: 123 KQELEQNLQKQNANVLNQNKLMFNDDAKKILEEIFLPVKKSVKEYNERLNSNEVSLKTHI 182 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 N+ + + M + A L + LKGD K +GN+ E+ L VLE SGL EG +Y+ Q +++ Sbjct: 183 DNMFKFSQNMTENADKLAKILKGDKKIRGNFAELQLKSVLENSGLVEGVQYKLQERFQDE 242 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 PD +V L + K ++IDAK +L + + + ++ + ++++ I L Sbjct: 243 -GKTYIPDAVVFLDKQKSIIIDAKFSLPS-----DFNFEDISQNTCLDLAYNLKSRIDEL 296 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 +K Y Q T ++VL+FIP + L L+ E+ A K + L +P TL +AL T Sbjct: 297 AKKPYMQY-DKHTYEFVLLFIPYQNILDLILNVDLEIYQYAYKKKVYLTTPNTLFMALNT 355 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 I W+ + N + D K +DK +DD I +++ + N KL+ G Sbjct: 356 INISWKNIQSNENILKAFDELGKFHDKFAGVLDDFEKIKENIKRLNTNVDNMQTKLTHGS 415 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQA 443 GN+ ++ + LG + ++ I ++++++ Sbjct: 416 GNIASRVIKLKELGAKTQKLIKCEMSDES 444 >UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Micrococcineae RepID=C7NKI3_KYTSD Length = 390 Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 168/381 (44%), Gaps = 20/381 (5%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A +T++ ++ + + +E L E+ A + + Sbjct: 30 ARGARGSTQLAVLRERSRSLQERAERAETSLQEREAEAA--------------SSARVLE 75 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 ++P++ L+ RQV ++ + +R++ ++ +L +L + Sbjct: 76 AVTPVQRSLERMERQVTALERDRVEQFGEVGERLRHVAASTERLDAATTSLAGSL-ASSG 134 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 +G WGE L R++E +G+ +++ QV +D ++PD++V LP + VV+DAK Sbjct: 135 VRGTWGETQLRRLVEHAGMLARVDFDEQVRAVSDHDREVRPDMVVNLPDDRVVVLDAKAP 194 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 + A+ D+ R L +H ++R H+ L K Y RT +V+ F+P + Sbjct: 195 MTAFLTAQEV-DEADRPGLLTQHAKALRQHVDTLSGKAYWSAF-RRTPQFVVCFVPTDAT 252 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 AL P L +AL ++L SP T + LRT+A W+++ RNA+++ +L++ Sbjct: 253 LAAALQADPALYDDALAKEVVLASPATTMALLRTVALTWQHDTVERNAEEVLLLGRQLHE 312 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 ++ + +G+ L + ++Y Q + L S VL A F LG+ + + Sbjct: 313 RLATTAGHLDQMGRQLTRTVESYNQLVGGLES---RVLVSARRFTDLGLPGEELPHAPGV 369 Query: 441 EQAVSQDEEYRLRSVPEQPND 461 A L + ++PN+ Sbjct: 370 TAAARPLTAPELTARTDRPNE 390 >UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W801_9ACTO Length = 414 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 96/387 (24%), Positives = 172/387 (44%), Gaps = 26/387 (6%) Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 R +A+ D + + + E L+ R S+ L+P+ Sbjct: 26 AVARYASARASGRDGAARAQTEAAQWRARAEELSAR---AQLAEERADRDGSVLRALAPV 82 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 R QL+ +V+ + A + +L ++R Q ++ +L AL+ + ++G W Sbjct: 83 RSQLEQVGARVEQMERQRAGQHASLAEQLRARAQAERELLVTTSSLASALRSRS-SRGLW 141 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIEN-----------DARSRMQPDVIVRLPQGKDVV 254 GEV L RVLE SG+ ++ Q S+ + + +PDV++ LP G + Sbjct: 142 GEVELARVLEISGMMPHVDFSEQRSVGSVLASRSSATASSGTTASRPDVVIHLPGGGYLA 201 Query: 255 IDAKMTLVAYERYFN-----AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 +D+K + AY R A D R + ++EH ++R+H+ L + Y + G + + Sbjct: 202 LDSKAPMDAYLRACGVEGEPASADTERRTLMKEHAKALRSHVDQLAARRYDRALGS-SPE 260 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 V++F+P EP ALD P L+ AL+ + L SP +LL LR A W + +A+ Sbjct: 261 LVVLFVPAEPVLAAALDADPTLMDHALEQGVALTSPASLLSLLRVCATAWARTAVNEDAR 320 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL-- 427 ++ + LY+++ + A+G +L ++ Y + + + S +L A +F L Sbjct: 321 ELLELGRTLYERLGTVAGHLDALGGALTRSVSAYNRTVASMES---RLLVTARSFETLAS 377 Query: 428 GVEIKREINPDLAEQAVSQDEEYRLRS 454 V R I PD A+ E + S Sbjct: 378 SVPSPRSICPDDAQVRSFATPELTVES 404 >UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=B8HC96_ARTCA Length = 428 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 101/374 (27%), Positives = 172/374 (45%), Gaps = 41/374 (10%) Query: 110 RLSEQFENLAN-----RIFEHSNRRVDEQNRQ--SLNSLLSPLREQLDGFRRQVQDSFGK 162 RLSE A R+ NR + E Q S+ L+P+ E+L ++QV Sbjct: 60 RLSEVSAQFAAADAERRLLAAQNRELGEARSQDGSVLRALAPVAEKLTAVQQQVALLERD 119 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 ++ L +++ + + Q+ + L AL+ ++ +G WGEV L RV+EA+G+ Sbjct: 120 RVEQYGQLAQQLQEARLSDEQLMRSTHALESALRSNS-ARGQWGEVQLRRVVEAAGMLRH 178 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 ++ QV + + ++PD++V+LP K +V+DAK+ L AY A++ L + Sbjct: 179 VDFVEQVH-SAGSDTTVRPDLVVQLPGEKILVVDAKVPLSAYL---EAQEMGASAVHLAQ 234 Query: 283 HIASV-----------------------RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEP 319 H + R H+ LG K Y +PG + + V+ FIP E Sbjct: 235 HADARPAALSGSDRRSQQALLAAHAKALRAHVDALGNKRYWDIPG-NSPELVVCFIPAES 293 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 AL+ L+ AL N++L SP TLL L+++A WR + + NA+++ D A +LY Sbjct: 294 ILAAALEADAGLLDHALSKNVVLASPGTLLAVLKSVAFTWRQDVLTDNARELFDLARQLY 353 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 D+M ++++ +G SL + D Y + L + VL A L + ++P Sbjct: 354 DRMGTLGENVTKLGSSLKTSVDRYNSLVGTLEA---RVLPTARKLNTL--DEAGLVSPAP 408 Query: 440 AEQAVSQDEEYRLR 453 E L+ Sbjct: 409 VEVTPRALAAPELQ 422 >UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C5F2G6_9HELI Length = 451 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 103/457 (22%), Positives = 203/457 (44%), Gaps = 37/457 (8%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQL--------AEREEMVAELSAA----KQ 50 + + + ++ V W +++ + L + ++ + A+L +Q Sbjct: 1 MLVSISVFLFVIAVVAVWFAVQNIALRKERDSLVVQIDTAQSTKQSLEAKLIETSKCHQQ 60 Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 + ++ +++ +L+ + L S T + D + Q + + + EQ+ Sbjct: 61 TLRENAIMQSQLDLIQKDKEILTSQLTKITQDYHFILQEKAKIQSKLESTATLLESLEQK 120 Query: 111 -------LSEQFENL----ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 L E+FE + + + + + E +++ L+S+ +P+RE + ++ ++ + Sbjct: 121 YSQNLVILKEEFEKSMQLQSQSMIQQNKLHLLEDSKKILDSVFNPVRESMKEYKDKLVAN 180 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 K L I+N+ + + Q A L + LKGD K +GN+ E+ L VLE SGL Sbjct: 181 EIK-------LEANIKNMFAYSQAIGQNADKLAQILKGDKKIRGNFAEIQLKNVLEHSGL 233 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 G +Y+ Q N S +PD +V L + K ++ID+K L N + E+ Sbjct: 234 VAGEQYKLQEHF-NFEGSGYRPDAVVYLDKHKSIIIDSKFPLPN-----NFSFESLNENV 287 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 QE + +++N I L +K Y T ++VL+FIP + LAL + A Sbjct: 288 CQEIVRNLKNRIDELAKKPYANFEA-HTYEFVLLFIPYQNILDLALSVDSGIYQYAYSKK 346 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 + L +P TL +AL+TI W Y + + K YDK +D + +++ Sbjct: 347 VYLTTPQTLFMALKTIEVSWVYIQSDEKVMKAFEEIGKFYDKFVGVAEDFERLKGLIERL 406 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 + KL SGRG++ ++ E+ + LG + ++++ Sbjct: 407 GKQSDELDSKLLSGRGSLASRFESLKKLGAKTAKKLS 443 >UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, RmuC family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVY7_METI4 Length = 385 Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats. Identities = 87/378 (23%), Positives = 181/378 (47%), Gaps = 28/378 (7%) Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ-------- 133 +L+ +EA + ++KI + +++ L F++LA+ + E +++ + Q Sbjct: 9 NLQLKIASLEAEKLAQEEKITWITKTQETLKTMFQSLASEVLESNSKSILGQVTFHFHSL 68 Query: 134 ----------NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 ++ + +++SPL + L+ Q+Q+ K +L+ I L + + Sbjct: 69 FENLKTDWSLKKEEIKNIVSPLEKGLEALDNQLQNLESKREGAYSSLSSHITLLAEAYKE 128 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 + + A L ++LK +G+WGE L R++E +G+ E Y Q E+ + D+ Sbjct: 129 LHRSATRLEQSLKSPL-VRGSWGEYQLQRLVEMAGMEEHISYLNQPLTEDK-----RADM 182 Query: 244 IVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 I+ +P + + +DAK + AY +A+++ R+ L+EH+++V+ IR L +K+Y + Sbjct: 183 IIFIPGNRKIFVDAKTPMRAYLEAVSADNEILRKEKLKEHLSAVKERIRELSKKEYGRT- 241 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 +YV+MF+P E L+ + P + AL+ N++L SP L L+ IA W+ + Sbjct: 242 QTEAFEYVIMFLPSEGLLSLSFEADPGIFQYALERNVLLASPINFLALLKAIAFGWQQQR 301 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 + ++IA+ KLYD + ++ + ++ + D + +A S + ++ Sbjct: 302 VTEEVEKIAEEIKKLYDSFIELLTTLTKMRKAFENTIDLFNKAS---SICQEKIIPSTRK 358 Query: 424 FRGLGVEIKREINPDLAE 441 + G K + E Sbjct: 359 IQSTGSFSKDIPEVNPIE 376 >UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E538 Length = 384 Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats. Identities = 75/318 (23%), Positives = 158/318 (49%), Gaps = 8/318 (2%) Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 + + + I SE R +A + R E LN L+ PL++ L ++ Sbjct: 36 EDKLKASMHEFIESESRNLLNTGTIAFKNALEIERSERENTGLKLNGLIEPLKDSLKTYQ 95 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +++ + E L + L + + + I L+ ALK + +G WGE+ L R Sbjct: 96 TYIENIERERKSESGALKDNLDTLSRKITDLEHDTIKLSGALK-NPSIRGKWGEITLRRT 154 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 +E +G+ ++ Q E+ +PD+I++LP + +V+D+K+ L Y + N E+D Sbjct: 155 VEIAGMTPYCDFIEQAVSED---RLTKPDMIIKLPNRRTIVVDSKVPLSGYFEHMNGEED 211 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 ++ L +++ + +H+R L K Y + ++D+V+MF+P+E L + +PE+I Sbjct: 212 ---KTFLDKYMLAFNSHVRDLASKKYWEKFDG-SVDFVVMFLPMESLLSLVMSNKPEIIE 267 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 +A+ +++ +P TL+ L T+ W+ + N + + + Y+ M+ F+ D++ Sbjct: 268 DAISKKVIIATPVTLISLLLTVHMGWKDINTVENFNGLIAKIKEFYNNMQTFVGDLNETS 327 Query: 394 QSLDKAQDNYRQAMKKLS 411 ++L K+ D++ + + + Sbjct: 328 KNLSKSIDSFNRMTRDIK 345 >UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2A7_ACIFD Length = 479 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 107/440 (24%), Positives = 196/440 (44%), Gaps = 27/440 (6%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECE-----LLNNEVRSLQSIN 76 + Q+A + +L A+ ++ Q E R + LL+ RS++ Sbjct: 21 VLLRRLGDQRAAAADATRTLETQLVEARTKLAQLEPQRLAEQTNLGPLLDQAQRSVEETV 80 Query: 77 TSLEADL------REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 + A+ + + + ++ + + + L E + L ++ + R Sbjct: 81 KRVVAEHLDHGSEQAIQKATALLDKEFQPRLASLEDGRKLLLESADTL-RKLVDEQLRSA 139 Query: 131 DEQNRQSL--------NSLLSPLREQLDGFRR---QVQDSFGKEAQERHTLTHEIRNLQQ 179 EQ +L L + L E++D ++ + + + + T+ +R+ Sbjct: 140 REQITTTLRASGSEAATQLSTTLTERMDQLKQLAASISEQLANDQRLTGTVEESLRSFVA 199 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 N ++ LT+AL+ K +GNWGE+VL +L +GL + +++ QV+ +D + Sbjct: 200 ENQELRTRVHELTQALQRSPKQRGNWGELVLENLLVGAGLTQHRDFDLQVAFRDDDGRTV 259 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 D I+ LP + +VIDAK+ LV Y R +D ++A + H ++R I L Y Sbjct: 260 IADAIINLPGERHLVIDAKVQLVDYLRAV---EDPANDTAARAHAEALRRQINELADHRY 316 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 +L LD +F+P+E A LAL+ P L+ A+ I L +PTTL+ L+ + LW Sbjct: 317 DRLVDG-ALDGTFLFVPIESALALALETDPALMELAIGKGIFLATPTTLIPVLKLVGFLW 375 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R + A++ A +L DK+ F + I + L A++ Y +A +L SGRGN +A Sbjct: 376 RGAERDSRAEEAERLARRLADKIASFAESFLQIDKGLQVARNAYERAEGQLRSGRGNAMA 435 Query: 420 QAEAFRGLGVEIKREINPDL 439 A + + + L Sbjct: 436 LARRLGEVSGRSGKALPAPL 455 >UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBX5_MICLC Length = 419 Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats. Identities = 99/390 (25%), Positives = 166/390 (42%), Gaps = 36/390 (9%) Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 R + A + ++ + EQ A R + +R + Q + S L+ Sbjct: 37 RRAQAELAALRTEHQGAREELAAARA---EQRALTAARAEDAERQRAESQ----VMSTLA 89 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 PL ++L + QV A + L ++R + + + +L LK + +G Sbjct: 90 PLGQRLAALQEQVSVLERDRASQFGRLGEQLRAAAATDRDLLNQTTSLMATLKSTS-ARG 148 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL-- 261 +WGE L RV+EA+G+ ++ Q ++ R++PD++V LP GK + +DAK + Sbjct: 149 HWGEAQLRRVVEAAGMLHHVDFTEQATLSGRDGERLRPDLVVSLPGGKAMAVDAKAPIGD 208 Query: 262 -------------VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 AYER R++ +H A+VR H+ L K Y + Sbjct: 209 ALAAEALADEPGEEAYER---------RQALAAQHAAAVRRHVDQLSAKSYW-AGLEHSP 258 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 + VL F+P E ALD P L+ A N+ LV+P +LL AL+++A WR + + NA Sbjct: 259 ELVLCFLPAESLLAAALDADPGLLDHAFSRNVALVAPVSLLTALKSVAYAWRQDTLAENA 318 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + A LY+++ + +G SL A D Y Q + + S VL A R + Sbjct: 319 HTVVASAKDLYERLGTLGTHLDRMGGSLKTAVDRYNQLVGNVES---RVLPAARRLREVD 375 Query: 429 VEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 + + E A L + E+ Sbjct: 376 PGLAPTPDIRTLESAPRPLAAPELVTGVEE 405 >UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPY8_9ACTO Length = 410 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 15/356 (4%) Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ--NRQSLN 139 D R +++ A+ + Q + + + + E N + ++ N Q+L Sbjct: 29 DRRRSQNDEDSSHHRAELGLAQADATRWQAAAAEATGRADVLERENVELSQRARNEQALL 88 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 ++ PL +L +V K+A + + ++ + ++A+E +L AL Sbjct: 89 RMIEPLSARLKDMTERVASMQAKQAAQDAAVREQLSATASAHRELARETTSLRTALTS-V 147 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR---SRMQPDVIVRLPQGKDVVID 256 ++G WGEV L R++E++G+ + ++ Q ++ S +PD+ V LP G + +D Sbjct: 148 SSRGTWGEVELRRIVESAGMLKHTDFSEQQNVATTNGAGASAARPDMTVHLPGGAHIAVD 207 Query: 257 AKMTLVAYERYFNAE-----DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 AK+ L A + E + R + EH +VR H++ L ++DY + Sbjct: 208 AKVPLTALLKAQEIEGTDQFSEARRSELVAEHARAVRAHVKELAKRDYP-AEFPGSPRIT 266 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 +MF+P E AL P ++ +ALK+ + +P++LL LR++A +W + AQ+I Sbjct: 267 VMFLPTESLLSQALADDPTILEDALKSGVAPATPSSLLALLRSVAAVWSSARVTEEAQEI 326 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 L ++ + + +G SL A NY + + L S ++ A F + Sbjct: 327 LALGRTLVKRIGTVANHVDKLGGSLRSAVSNYNKTIASLDS---RLIQTANRFESI 379 >UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZN7_9ACTO Length = 368 Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats. Identities = 93/338 (27%), Positives = 165/338 (48%), Gaps = 13/338 (3%) Query: 104 MINSEQRLSEQFENLANRIFEHSNR---RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 + S Q L E + E + + Q L+S L P+ E L +V Sbjct: 29 LSYSRQHLPEAQPTKSGLGAEEAMQLQSAFSGQVTNQLSSQLRPIYESLHSLSNKVHQVD 88 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 ++ + L ++ + QQ++ Q+ Q + L AL+ +K +G WGE L RVLE SGL Sbjct: 89 AQQRENLAGLRSQLVSAQQVDQQILQATLGLDSALRNTSK-RGTWGEASLRRVLEMSGLT 147 Query: 221 EGYEYETQVSIEND-ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 + ++ QVS++ + S PDV+V LP ++IDAK+ L AY + N ED + Sbjct: 148 KHIDFAEQVSLDTEVDESGAIPDVVVYLPNNAALIIDAKVPLDAYLQVKNLED----TAQ 203 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L+ H +V+ H+ +L ++ Y Q +++D V++F+P E +L+ P L +AL+ Sbjct: 204 LKSHALAVQRHVTVLAKRQYAQ-KLTKSVDSVILFMPSEALVSASLEADPTLFEKALQQG 262 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 +++V P L+ LR++ +LW + + +AQQI + L ++ ++ +G+SL Sbjct: 263 VIVVGPAGLMALLRSVGHLWARQSLAEDAQQILKLGTTLTTRLNKLSSLLADLGKSLSNT 322 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 +Y Q ++S G L ++ E+N Sbjct: 323 VKSYNQV---IASFEGRFKTTVRNISALETSVEPELNE 357 >UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJV5_KOCRD Length = 411 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 26/365 (7%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 +T+LE +L + + + A + ++L ++ E+L R + Sbjct: 42 QKSTALETELEDARGQ----RLAALQDAASARAAAEQLEQRVESLEARAVQD-------- 89 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 Q + L+PL +QL R V AQ+ + + + + Q+ +L Sbjct: 90 --QDVMRALAPLNDQLSSVGRHVNQLERDRAQQFGAVAQALEAARTTDQQLLHATTSLEG 147 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 +L+ +G WGE+ L RV+EA+G+ ++ Q ++ +PD+++ LP + V Sbjct: 148 SLRSTT-ARGAWGEMQLRRVVEAAGMTRHVDFTEQ-TVRATESGTQRPDMVINLPGAQTV 205 Query: 254 VIDAKMTLVAYERYFNA------EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 V+DAK + +Y E++ R L H ++R H+ LG K Y + Sbjct: 206 VVDAKAPMSSYLDAQAVPADGSPENEQRRAQLLAAHAKALRAHVNTLGTKKYWSAEE-NS 264 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 + V+ F+PVE A ALD L+ A + N+ LVSP +LL +L+ +A WR + N Sbjct: 265 PELVMCFVPVESALAAALDADASLLDHAARANVALVSPVSLLASLKAVAFSWRQATLTDN 324 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+++ + +LYD+M +S +G SL ++ + Y + + L S VL A L Sbjct: 325 ARELYRLSRELYDRMGSVGKHLSDMGGSLRRSVEGYNKLVGSLES---RVLPSARRIAEL 381 Query: 428 GVEIK 432 Sbjct: 382 DPTAT 386 >UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7Y6_GEMAT Length = 496 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 105/436 (24%), Positives = 185/436 (42%), Gaps = 18/436 (4%) Query: 7 VYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECE-LL 65 + AV+ V I ++ A + AER M EL+ A+ + + RA+ E L Sbjct: 32 LTAVLVAVVGIIAVRVLKHRTKTATAHRDAERVRMETELAEARAREDAAILERAQLEASL 91 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 + + ++ +L+ E+ R+ QQ A E+R S + E + Sbjct: 92 HATREAAEAQRAALQQLSSELGDRL--LQQQATAFQATTAALERRASSESEAI-----RA 144 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + + + L+ L P+ E L + + A E L +++L + Sbjct: 145 AYEAATAERNERLHVELQPVHETLQRLADTSVATDTRSAAEFSRLVTLVQSLNDEHRAHR 204 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 +E L L+ ++ +G +GE L R LEA+GL+E Y Q ++ + +PD ++ Sbjct: 205 EETRKLQDVLRV-SQVRGRYGEWTLQRALEAAGLQERVHYVMQPALRGEEG-LFRPDAVL 262 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ---- 301 LPQG+ +V+D+K L +A + + L H ++R HI L K Y Sbjct: 263 LLPQGRAIVVDSKAPLQHLLDAQHASSQSEKSALLDRHAKALRLHIDQLASKSYPARVSA 322 Query: 302 -LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 +P LD VL+F+P + A R P+L+ A + LVSP +LL+ L + LWR Sbjct: 323 VVPDRVLLDGVLLFVPADAVLDAAFRRDPKLLQHAASQQVHLVSPASLLIVLSAVEQLWR 382 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 + + + A +I + L ++ + + + + ++L Y L S +L Sbjct: 383 QDGRDQRAAEIEKIGADLLGRLGVVLGHVCHVQRALSDCVTAYNALTGSLES---RLLPI 439 Query: 421 AEAFRGLGVEIKREIN 436 A LGV + I Sbjct: 440 ARRMEELGVRTREAIP 455 >UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 Tax=Tropheryma whipplei RepID=Q83MS0_TROWT Length = 482 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 95/405 (23%), Positives = 186/405 (45%), Gaps = 13/405 (3%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 R L N L + ++ T + AA+ H I+ + E L E + + + ++ Sbjct: 70 RLLSKKNQELSDQVIQLKTELLAARAHG---IQLEKDKEYLLKELSKTVHLQNQKNEEES 126 Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 + + + + L + LD +++ + + + E+ + +++ +++ + Sbjct: 127 LIKTQLAPVKESVKQLTQTLDLLKKEQTQTMVRLESQIKETRTELDDNRKITRELSVDTR 186 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 LT L+G K G WGE L +L+ SG+ G +Y+ Q +++ SR +PD I+ P Sbjct: 187 ALTETLRG-TKHAGIWGEQRLRELLQNSGMIRGRDYDLQPILDD---SRYRPDAIIHAPG 242 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 G ++VIDAK L A+ + E + L++H SVR HI LG++ Y + Sbjct: 243 GLEIVIDAKAPLDAFLASVDCESTSETQKLLKKHAQSVRKHIAELGKRAYHN--KIDGPK 300 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 + L+F+P E A++ +L++ A K+NI +VSP L ++TI L ++ + +A+ Sbjct: 301 FTLLFLPTEGLLRSAVEEDSDLLSYAFKSNIAIVSPVNLWAVVQTITYLCTQQNLAHSAK 360 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +I L ++ +S +G+SLDK+ + + + + + N++ LG Sbjct: 361 EIVRLGESLIANVKSIAQHISELGKSLDKSIMYFNRTVGAVEN---NLIRTLGKINTLGN 417 Query: 430 EIKREINP-DLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQ 473 EI+ + + Q D + R + ND +Y +Q Sbjct: 418 EIELQDCKFEAVRQFAKLDAKNDARKNDARKNDARKNDAHKYTEQ 462 >UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I000_9BACT Length = 419 Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats. Identities = 98/255 (38%), Positives = 158/255 (61%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E E + + E R+ + +LQ+ +L AD + T ++ +++ ++ Sbjct: 159 EHAGESGTIRSLTKELEETRSRLLSEIQKKEALQASEATLRADFLSLQTLLDESKKSYEE 218 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 K+ ++ + + LS QF+NLA I E +++ QN+++L SLL P+R +L F+ +V++ Sbjct: 219 KMALLVEARETLSAQFKNLATEILEEKSQKFSLQNQEALKSLLDPVRLKLGEFQSKVEEV 278 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 + KE ++R L ++ L +LN ++ EA NLTRALKG KTQGNWGE++L +LE SGL Sbjct: 279 YVKEGKDRSALHAQVNQLMELNRTLSDEAQNLTRALKGSGKTQGNWGELLLNNILEGSGL 338 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 R+G +YETQ S + SR QPDV++ LP+G+ +VID+K++L AY Y A ++ R++A Sbjct: 339 RKGSDYETQESHTREDGSRAQPDVVIHLPEGRHLVIDSKVSLNAYVEYVGATEEAERQAA 398 Query: 280 LQEHIASVRNHIRLL 294 L+ HI SVR HI L Sbjct: 399 LKRHIDSVRRHILDL 413 >UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B6J7N4_COXB1 Length = 445 Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats. Identities = 85/413 (20%), Positives = 173/413 (41%), Gaps = 30/413 (7%) Query: 1 MDFSIMVYAVI-ALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 MD+ ++ I LV +++G L Q + +Q ++ ++ + ++ Q + R Sbjct: 20 MDWQAILIPGIPTLVTISVGALIYGRLKQQHRVDQTLHQQLLIIQ-----DRLKQWDDQR 74 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFENL 118 + L + + Q + + + ++ Q ++ + L+ ENL Sbjct: 75 NFIQSLIQQQQKEQIEQRQRFDEYQIKSLKL--IQDSLIQNMQSIREQVSATLTAHAENL 132 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 NR+ ++ + ++ L + + +L + ++F + I Q Sbjct: 133 GNRV-----DKLTSETQERLKEISGQVDRKLTEGFEKTTETFTDVVKRLTI----IDEAQ 183 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + +++ ++L L D +++G +GEV L+ ++ + Y Q ++ N+ R Sbjct: 184 KKITELSTNVVSLQEVLC-DKRSRGAFGEVQLSNLIHN--MLPESHYALQHTLTNNKRC- 239 Query: 239 MQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGR 296 D I+ LP+ ++VIDAK L +Y++ N + + R A ++ + +R HIR + Sbjct: 240 ---DCILFLPEPTGNIVIDAKFPLESYQQIHNEKLSESERAQAEKQFRSDIRKHIRDIAE 296 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K + T + +MFIP E F P+LI A K+ + LVSPTT++ L T Sbjct: 297 K---YIVPGETAEGAVMFIPAEAVFSEIHAHYPDLIEIAHKSRVWLVSPTTMMAILTTAR 353 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 + + + I L F D M + +D AQ++ + K Sbjct: 354 AVLKDAATRKQVHIIQKHLIMLSKDFDRFQDRMDKLAHHIDLAQEDVSKVHKS 406 >UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales RepID=Q16CD2_ROSDO Length = 411 Score = 213 bits (543), Expect = 9e-54, Method: Composition-based stats. Identities = 77/392 (19%), Positives = 158/392 (40%), Gaps = 27/392 (6%) Query: 47 AAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMIN 106 AA + +E + +L V+ L + L L+ V+ AQ + Sbjct: 39 AAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSDTQANAQTQV------IQT 92 Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 E RL+ + + +R+ +++ R ++++L + ++E L G +Q S + + Sbjct: 93 VEARLAAVQQQMQDRLADNAMR-----SQRALTDMQERMKETLHGSSKQTTTSLTQLQER 147 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 + I Q +++ + ++L L + +T+G +GE+ L ++ + Y Sbjct: 148 LAS----IDKAQDNITKLSGDVLSLQDIL-SNKQTRGAFGEIQLHDIVSKA--LPNDSYA 200 Query: 227 TQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 Q ++ N + D ++ LP +VID+K L AYE+ A+ ++ + A+ + Sbjct: 201 LQHTLSNGK----RADCLIHLPNPPGPIVIDSKFPLEAYEQLRAAKTEWDLKDAVAKMKT 256 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +V HI + K + T D LMF+P E + PEL+ + + +VSP Sbjct: 257 AVTKHINDISEK---YIIEGETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIVSP 313 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TT + L T+ + + A I L+ + L ++ + + +AQ + + Sbjct: 314 TTCMATLNTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQAQRDVHE 373 Query: 406 AMKKLSSGRGNVLAQAE-AFRGLGVEIKREIN 436 + F L E + + Sbjct: 374 ISTAAERAGKRAVKLDNFDFEELSQEDDKILP 405 >UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q5ZWX9_LEGPH Length = 420 Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats. Identities = 87/426 (20%), Positives = 180/426 (42%), Gaps = 37/426 (8%) Query: 7 VYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLN 66 + IAL + + W+ ++ EQL ER + + I S+ ++ + +N Sbjct: 13 IALAIALQFLLLFWVLIKQAQQKKLTEQLGERIQQALISQLHQLHIDLSQSYQTSQQFIN 72 Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHS 126 ++ ++ Q +D RQM + ++++ F++ A+ + H Sbjct: 73 EKI----------------AQGQLATQQLISDAIQRQMADVREQMTHSFKHHASSLTSH- 115 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 + + E+ R LN+L + +L + +F + I Q+ +++ Sbjct: 116 LQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTI----IDEAQKKITELSS 171 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 ++L L D K +G +GEV L+ ++ S + Y+ Q ++ N + D ++ Sbjct: 172 HVVSLQDVLV-DKKARGAFGEVQLSTLI--SNMLPSASYQMQYTLSNQK----RADCVLF 224 Query: 247 LPQG-KDVVIDAKMTLVAYERYFNAED-DYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 LP+ ++VIDAK L Y+R N++ R+S Q+ ++ HI+ + K + Sbjct: 225 LPEPTGNIVIDAKFPLETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEK---YIVP 281 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 T D +MFIP E F P+LI + K + LVSP+TL+ L T + + + Sbjct: 282 NETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDAT 341 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + I L + + F M + + +D A + + +++ + ++ + Sbjct: 342 RKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNE----VNTSAKKITSRFQKI 397 Query: 425 RGLGVE 430 + +E Sbjct: 398 ESVDIE 403 >UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y6_9ZZZZ Length = 376 Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats. Identities = 69/340 (20%), Positives = 138/340 (40%), Gaps = 13/340 (3%) Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 + + + + ++ F+ +A+ I + + +L L+ ++ Sbjct: 28 KSLLELQEKNSDRDKDFENAFKAIASDIAISNRDDFLKLANSQFKNLSKESDTNLENKKK 87 Query: 155 QVQDSFGKEAQERHT-------LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 + ++ G+ ++ + L + + + L L K +G WGE Sbjct: 88 LIDENLGQMSKRLKSIEDASIKLNENLEATNTQTKDLTDTTVKLREILSSSQK-RGQWGE 146 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 ++ +L+ GL EG Y Q +++ +PD LP+ K + +D K L YE+Y Sbjct: 147 RIVEDILDVIGLIEGINYTKQAVVDSGE----RPDFTFILPKEKTINMDVKFPLAHYEKY 202 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 + ED+ + + + + V+ H++ + +++Y P TLDYVLM +P E + Sbjct: 203 IDTEDEQVQINEKKSFLKDVKKHVKDITKRNYID-PASGTLDYVLMLVPNESIYSFINKE 261 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 +I AL+N ++L SP TL L I R A + S + +++ Sbjct: 262 DSGIIDFALQNKVLLCSPLTLYAILSLINQATRNFEIEEKASDVMALLSTFKSQWEKYVE 321 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 M +G+S+ A+ +Y + L + E L Sbjct: 322 KMDKMGRSISTAKADYEDLVTTRRRQLEKPLDKIEDITNL 361 >UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J2_9ZZZZ Length = 343 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 84/346 (24%), Positives = 147/346 (42%), Gaps = 24/346 (6%) Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 L R+ + R ++ +L + +R+ +D R +QD ++ L + +L Sbjct: 22 LMFRLLKQGGSRSEDS---ALGHQVGEIRQGMDRVNRAIQDLNLDRVKQSERLETMLTSL 78 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 ++ + R + + + +G WGE + V G E Y Q ++ + Sbjct: 79 NSSSSAL--------RDILANTQVRGQWGERMAEDVFRLIGFVEAVNYTKQTTVADGHS- 129 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +PD + +P+GK + +DAK L Y +Y AE + + + I VR+ R + + Sbjct: 130 --RPDFTILMPEGKKLNMDAKFPLTNYMKYVEAESEQEAQEYSRAFIRDVRDRAREVVGR 187 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 DY P TLDYVL+FIP EP + +++ EAL+N ++L SP +L L I + Sbjct: 188 DYIN-PDDNTLDYVLVFIPNEPMYHYIQQHGADVVEEALRNQVVLCSPISLFAILSIIRH 246 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 + + +I + + F+D M +G+ ++ AQ + + Sbjct: 247 ALDNFAIEQASDEILSELAVFDRQWGNFVDQMETVGRRMESAQTAFESLKGTRTRALDRP 306 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 L + R KR PD E DE + S+PE P DE Sbjct: 307 LGRIRDIR------KRRNIPDALEDGA--DEADDVMSLPE-PADET 343 >UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaproteobacteria RepID=A9ZIQ0_COXBU Length = 374 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 81/400 (20%), Positives = 166/400 (41%), Gaps = 30/400 (7%) Query: 1 MDFSIMVYAVI-ALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 MD+ ++ I LV +++G L Q + +Q ++ ++ + ++ Q + R Sbjct: 1 MDWQAILIPGIPTLVTISVGALIYGRLKQQHRVDQTLHQQLLIIQ-----DRLKQWDDQR 55 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFENL 118 + L + + Q + + + ++ Q ++ + L+ ENL Sbjct: 56 NFIQSLIQQQQKEQIEQRQRFDEYQIKSLKL--IQDSLIQNMQSIREQVSATLTAHAENL 113 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 NR+ ++ + ++ L + + +L + ++F + I Q Sbjct: 114 GNRV-----DKLTSETQERLKEISGQVDRKLTEGFEKTTETFTDVVKRLTI----IDEAQ 164 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + +++ ++L L D +++G +GEV L+ ++ + Y Q ++ N+ R Sbjct: 165 KKITELSTNVVSLQEVLC-DKRSRGAFGEVQLSNLIHN--MLPESHYALQHTLTNNKRC- 220 Query: 239 MQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGR 296 D I+ LP+ ++VIDAK L +Y++ N + + R A ++ + +R HIR + Sbjct: 221 ---DCILFLPEPTGNIVIDAKFPLESYQQIHNEKLSESERAQAEKQFRSDIRKHIRDIAE 277 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K + T + +MFIP E F P+LI A K+ + LVSPTT++ L T Sbjct: 278 K---YIVPGETAEGAVMFIPAEAVFSEIHAHYPDLIEIAHKSRVWLVSPTTMMAILTTAR 334 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 + + + I L F D M + + Sbjct: 335 AVLKDAATRKQVHIIQKHLIMLSKDFDRFQDRMDKLAHHI 374 >UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q28JZ7_JANSC Length = 387 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 71/335 (21%), Positives = 135/335 (40%), Gaps = 17/335 (5%) Query: 95 QHADDKIRQMINSEQRLSEQFENLANRI--FEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 + + + + Q L + E LA + R ++++ L +++ + Sbjct: 48 EPLAQHMASLGQTVQALGQGQERLAGGLASVSDHQARAQASLQEAMERRLEEVQKGMSET 107 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 R + E +I Q +++ + + L L + + +G +GE+ L Sbjct: 108 LRGTSTRTARSLGELQQKLEQIDRAQAKIEKLSGDVLGLQDIL-SNKQRRGMFGEIQLND 166 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE 271 ++ SG Y Q ++ N + DV+VRLP +VIDAK L AYE NA+ Sbjct: 167 IV--SGALPPDAYGFQATLSNGK----RADVLVRLPNPPGPIVIDAKFPLEAYEALMNAQ 220 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 + AL+ A+VR HI+ + K + T D LMF+P E + R PE+ Sbjct: 221 GPEDQLRALKALGAAVRVHIKAISEK---YIIEGETADGALMFLPSEAVYAELHARLPEV 277 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSA 391 + + + +VSPTT + L T+ + + A +I +L+ + + + Sbjct: 278 VRDGFDARVWIVSPTTCMATLNTMRAVMKDARMREQAGEIRKALRQLHRDVEIVGERAGK 337 Query: 392 IGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 + L A ++ + + + +AE Sbjct: 338 LEAHLRMAGED----VAGILTASVRAGKRAERLDN 368 >UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=Magnetospirillum RepID=Q2VZP7_MAGSA Length = 456 Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats. Identities = 100/466 (21%), Positives = 184/466 (39%), Gaps = 41/466 (8%) Query: 1 MDFSIMVYAV--IALVGVAIGWLFASYQHAQQ--KAEQLAEREEMVAELSAAKQQITQSE 56 MDF+++ A+ +AL+GVA+ L +++ + E++ E A+ T Sbjct: 15 MDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQDRRETAEMIRTFQG 74 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 A + + E+R L + T L + T+ A ++ I+Q+ + + Sbjct: 75 DSAASADKNHTELRIL--VETKLAEFRSDQATQARALREEVLGGIKQLGEGIGKTVAEQ- 131 Query: 117 NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIR 175 R+ ++ +N Q L + + E+L G +++ +SF + + + Sbjct: 132 ---TRVVSEHLEKLRGENTQKLEQMRQTVDEKLQGTLEKRLGESFKLVSDRLEQVHKGLG 188 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 +Q +A +L R L + KT+G WGEV L +LE + +Y + + + Sbjct: 189 EMQS----LASGVGDLKRVLT-NVKTRGTWGEVQLGALLEQ--IFRADQYMREANCK--K 239 Query: 236 RSRMQPDVIVRLPQGKD------VVIDAKMTLVAYER---YFNAEDDYTRESALQEHIAS 286 S + D +RLP D + ID+K YER D E+A + Sbjct: 240 GSLERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETR 299 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSP 345 V++ R + K Y P T D+ ++F+P E + L R P L+ ++ P Sbjct: 300 VKSFARDIRDK-YVNPP--TTTDFAILFLPTEGLYAEVLRR-PGLVDLIQRDYKVIAAGP 355 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTL L I ++ I R+S++++ + + G LDK Q ++ Sbjct: 356 TTLGAILNAIQMGFK-------TMAIEKRSSEVWEILGAVKTEFGKYGDVLDKVQKKLQE 408 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 A K + A R + + LA A + D+ Sbjct: 409 ASKTIDDVAVRKRAIDRQLRKVEAIPDAGVEALLALGATTIDDTGE 454 >UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae RepID=B7QSN6_9RHOB Length = 419 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 78/384 (20%), Positives = 157/384 (40%), Gaps = 33/384 (8%) Query: 45 LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM 104 L + + E + +L + L +L +L+ V+ AQ ++ + Sbjct: 36 LRNSARAARAIEPLGHQIGVLGQMTQQLSMGQEALRGNLQAVSDTQANAQ------LQIL 89 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 E RLS+ + + +R+ +++ R+ ++L + ++E L G ++ S + Sbjct: 90 QTMESRLSDVQQRMNDRLADNALRQ-----ARALAEMQERMQESLHGSTKRTVTSLT-QL 143 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 QER + I Q +++ + + L L + +T+G +GE+ L ++ + Sbjct: 144 QERLAV---IDKAQDNITKLSGDVLGLQDIL-ANKQTRGAFGEIQLNDIVSKA--LPADS 197 Query: 225 YETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 Y Q ++ N + D ++ LP +VID+K L Y+ NAE R SA ++ Sbjct: 198 YAFQHTLSNGK----RADCLIHLPNPPGPIVIDSKFPLEPYDALRNAETPEQRASAARQL 253 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 ++R HIR + K + T D LMF+P E + +++ E + +V Sbjct: 254 KGALRAHIRAIAEK---YILDGETADGALMFLPSEAVYAELHANFADVVREGFAAKVWIV 310 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTT + L T+ + + A I L+ D+ +G + ++ Sbjct: 311 SPTTCMATLNTMRAILKDARMREQAGAIRTELGLLHK-------DVERLGDRVGNLDRHF 363 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGL 427 A K ++ + + + L Sbjct: 364 GMAAKDIAEIKISADKAGRRAQRL 387 >UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=C6XEK3_METSD Length = 451 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 91/465 (19%), Positives = 174/465 (37%), Gaps = 34/465 (7%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAER------------EEMVAELSAA 48 M +++ VIA + + L + +E LA+ ++ L+ Sbjct: 1 MMQIVILVLVIACLLALVVLLLRQSRTPDAASELLAQLMPQLEDKHRAMLRDLHDGLNKL 60 Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI----RQM 104 +++ S +E L + L+ +++A T + ++ +K+ + Sbjct: 61 GDRLSLSSVDSSER-LRQAVAQELKETRDAMQALQAAQTNSLAQTRETVLEKLHTTLAEQ 119 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 +EQ L + A S + + L + + E+LD ++ D+F + Sbjct: 120 GKAEQTLIQDTMLKATSQLTASIETLTKAVDARLEEIGGKVSERLDEGFKKTNDTFVRVM 179 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + T I Q+ + ++L L GD +++G +GEV L ++ G Sbjct: 180 ERLAT----IDEAQKKIDGLTTNVVSLQE-LLGDKRSRGAFGEVQLEALVRNVLPNSG-- 232 Query: 225 YETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQE 282 + Q + N + D + LP+ V +D+K L Y R + + R A ++ Sbjct: 233 FAMQHVLPNGT----RVDCALFLPEPTGTVAVDSKFPLENYHRMLESGISEVERALAQRQ 288 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 A V+ H+ + K + T D +MFIP E F P+++ A+ + + Sbjct: 289 FKADVKKHVDDIASK---YIIPNVTSDGAVMFIPAEAVFAEIHAYHPDVVDYAMAKRVWV 345 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 VSPTTL+ L T + + + I D KL + F M + + +A ++ Sbjct: 346 VSPTTLMAVLNTARAVLKDVETRKQVHIIKDELGKLGKEFGRFDVRMKKLADHIRQAHED 405 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 S AQ E G PDL + ++ D Sbjct: 406 ALDVHTT-SQKISRRFAQIERVELQGDAEAALALPDLPDDILADD 449 >UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK07_9BACT Length = 377 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 77/364 (21%), Positives = 158/364 (43%), Gaps = 20/364 (5%) Query: 83 LREVTTRMEAAQQHADDKIR-----QMINSEQRLSEQFENLANRIFEHSNR---RVDEQN 134 R E D ++ ++S + +++F LA + + N+ + E Sbjct: 25 NRRARNESERELLRITDGMKGAFAELSMDSLSKNTDEFLKLAGNVMDSKNKEGEKDLEAK 84 Query: 135 RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRA 194 + +++ L + +L+ + + + +I+N +++ +L +A Sbjct: 85 KALIDAQLLNMSRELERVHLLMTGMEKEREARFSEIAQQIKNTVHQTEKLSDVTASLNKA 144 Query: 195 LKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV 254 L + +G WGE + ++ +G++E Y+ Q ++ N + +PD LPQG V Sbjct: 145 L-ASSAERGRWGERMALDIIRTTGMKEKINYDVQKTMANGS----RPDFTFYLPQGFCVH 199 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 +D K L +Y ++ +E+ +E ++ I VR I+ + + Y TLD +L+F Sbjct: 200 MDVKFPLDSYLKFC-SEEGAGKEPHIKNFIRDVRQKIKDVKTRGYID-QQENTLDVMLLF 257 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 IP E + ++ P+++ A++ ++L SP +L L I + ++ Sbjct: 258 IPNESVYEFIYEKDPQIMDIAMEAGVILTSPLSLFAVLAVIRQSVENFAFESTSGEMLKL 317 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ-AEAFRGLGVEIKR 433 K Y + F + +G+ +D+AQ +Y + L S R N+L + E L E Sbjct: 318 FGKFYQQWDKFTAKLEMVGKKIDEAQKSYDE----LISTRRNMLEKPLEKIELLRSEKGI 373 Query: 434 EINP 437 EI+ Sbjct: 374 EISE 377 >UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6J3_9BACT Length = 490 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 81/450 (18%), Positives = 174/450 (38%), Gaps = 35/450 (7%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 +G L +++ + A + A Q + + E + + + Sbjct: 62 LGALRTELATQLALTREEQARSAVVTRDDTRVLFADFQKNTTAALTSIREAQSQQFADAR 121 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 AD RE + +K++ ++ + + + ++ Q Sbjct: 122 HAQNQQLADTREAQNTRLNDFSNRLEKLQTLLATAAEDTRA-------TLDSRLEKLAAQ 174 Query: 134 NRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 N Q L+ + + E+L +++ +SF + ++ ++ + +Q +A + +L Sbjct: 175 NAQKLDEMRQTVDEKLQSTLEKRLGESFKQVSERLESVHKSLGEMQA----VATDVGDLK 230 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 R L + KT+G WGE L +LE L E YE +++ + RS + V+LP + Sbjct: 231 RVLT-NVKTRGTWGEYQLGAILETMLLPEQYE----TNVKPNPRSESVVEFAVKLPGRDE 285 Query: 253 ------VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 + IDAK YER A D E A ++ A V R + R Y P Sbjct: 286 AGKPVWLPIDAKFPKENYERLSAASLRADPVATEQAARDLAADVEKSARDI-RDRYISPP 344 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVALRTIANLWRYE 362 T D+ ++F+P E + + R P + + + ++L P+TL L ++ ++ Sbjct: 345 --HTTDFAVLFLPTEGLYAEIIRR-PGVADKIQREYRVLLAGPSTLAALLNSLQMGFKTL 401 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + + ++ + + F + ++ + + LD+A + + G++ + Sbjct: 402 AIQKRSSEVWKLLGAVKTQFGTFGELLAKVQKKLDEASK----VVGDAAQRHGSITRRIA 457 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 + E+ P A+Q ++ + L Sbjct: 458 KVEEMPAAEAAELLPLEADQTAAKGGDSDL 487 >UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q0B0Y1_SYNWW Length = 450 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 81/431 (18%), Positives = 168/431 (38%), Gaps = 36/431 (8%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 L + +E + +L + + E + S ++++ SL A + E+ + Sbjct: 45 LEKSQERMEQLLREEMSCNREEMNVTARQGREELSNSFKTLSDSLSARMVEMGNLQQYQL 104 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FR 153 ++ + S ++ EQ E R + ++N Q L + + + E+L Sbjct: 105 DGFSQQMAHLTQSNEQKLEQMRGT----IEERVRELQKENAQKLEQMRTVVDEKLHATLE 160 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +++ +SF ++ + + +Q +A +L + L + K++G WGEV L + Sbjct: 161 QRLGESFKLVSERLEQVHKGLGEMQA----LASGVGDLKKVL-SNVKSRGTWGEVQLGNI 215 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERY 267 LE E +Y + V+++ A + + V+LP + IDAK L Y R Sbjct: 216 LEDILAPE--QYGSNVAVKKGA---ERVEFAVKLPGPDKEGSPLWLPIDAKFPLEDYHRL 270 Query: 268 FNAEDDYTR---ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 A D E A + ++ + + K Y + P T D+ +MF+P E + Sbjct: 271 LEAYDGADLAAIEQAGKNLENRIKAQAKEICSK-YIEPPA--TTDFAIMFLPTEGLYAEV 327 Query: 325 LDRQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 L R P L + I + PTTL L +++ +R I R+ +++ + Sbjct: 328 LRR-PGLFENLRQDYRITVAGPTTLAALLNSLSMGFR-------TLAIQKRSGEVWAILG 379 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 + G L+K + ++A + + + +++ N L+ + Sbjct: 380 AIKSEFGKFGMVLEKTRKKLQEASNSIEEAARRSRVMERKLKEVEELPEKQANELLSAEG 439 Query: 444 VSQDEEYRLRS 454 ++ S Sbjct: 440 YGEEIAAGSDS 450 >UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bacteroidetes RepID=A6L970_PARD8 Length = 423 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 89/424 (20%), Positives = 170/424 (40%), Gaps = 33/424 (7%) Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE-VTTRMEAAQQHADDKIRQMINS 107 Q + + + E L + +Q +E + RE E ++ A D ++ S Sbjct: 15 TQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREESRLVAKDNREELARS 74 Query: 108 EQRLSEQFE---NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 E FE + NR+ + +DE+ ++ +++ L E ++Q + Sbjct: 75 MNEFKEAFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRI 134 Query: 165 QERHTL-THEIRNLQQLNAQMA---QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 + L T ++ ++Q+ +M Q+ L R L + KT+GN GE+ L+ +LE L Sbjct: 135 GQSFRLVTEQLESVQKGLGEMQTLAQDVGGLKRVL-SNVKTRGNIGEIQLSMLLEQ--LL 191 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDY 274 +YE V + + + + V+LP D + IDAK YE+ +A D Sbjct: 192 APEQYEANVHTRKGSDAVV--EFAVKLPGRDDAREFVYLPIDAKFPKDVYEQLLDAYDAA 249 Query: 275 TR---ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 E+A + +++ + + K Y P T D+ +MF+P E + + R L Sbjct: 250 DSQAIETAGKLLETTIKKMAKDISDK-YLAPPA--TTDFGIMFLPFEGIYAEVVRRSALL 306 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSA 391 +++ PTTL L ++ +R I + +++ + + Sbjct: 307 EDLQRNYKVVVTGPTTLAAILNSLQMGFR-------TLAIQKHSGEVWTILGAVKKEFEK 359 Query: 392 IGQSLDKAQDNYRQAMKKLSSGRG-NVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 +G L+KAQ N + A ++ G A + + RE L E + +E+ Sbjct: 360 VGGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLSDREARAILPEIGILTEEDE 419 Query: 451 RLRS 454 + S Sbjct: 420 KAES 423 >UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C7RC44_KANKD Length = 501 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 79/395 (20%), Positives = 166/395 (42%), Gaps = 28/395 (7%) Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQ-----MINSEQRLSEQFENLANR 121 ++ + L +L+ ++ ++ ++E Q+ A +++ M + + ++ + A Sbjct: 127 SQQKELYQFKETLQKNILQLKDQIELNQKEALAMLQEQFRRGMKDVREEITLNLKTQA-E 185 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 FE + + + + L + + ++L + +F + R L I + Q+ Sbjct: 186 NFEKNMSGLTKTTDERLKEISGQVEKRLADGFEKTTQTFQDVLK-RLAL---IDDAQKKI 241 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 +++ ++L L D +++G +GEV L ++ S + Y+ Q S N Sbjct: 242 TELSSNVVSLQEIL-SDKRSRGAFGEVQLESLV--SNVMPTSHYKFQHSFSNGK----IV 294 Query: 242 DVIVRLPQGKDVV-IDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDY 299 D + LP+ V+ +DAK L Y++ + E R+ A + I ++ H+ + K Sbjct: 295 DCALFLPEPTGVIGVDAKFPLENYQKMVDVERSGPERDQAHKAFIKDIKKHVNDIASK-- 352 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 + T +MFIP E F PEL+ A + + +VSPTT++ L T + + Sbjct: 353 -YIIDQETAVGAVMFIPAEAVFAEIHAHHPELVEFAQQQKVWMVSPTTMMALLTTASAVL 411 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E + I + L F MS + + ++ D+ +KK++ + + Sbjct: 412 KDEATRKQVHIIQEHLGYLSKDFGRFRTRMSDLARHINNVSDD----VKKVTISADKISS 467 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRS 454 + E VE+ E + E A + E + S Sbjct: 468 RFEKIEQ--VELNHEDHEHSIEVAATAKIENKKDS 500 >UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6BU70_9PROT Length = 434 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 74/408 (18%), Positives = 171/408 (41%), Gaps = 27/408 (6%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M +++ A++ ++ L +L E + + + ++ Sbjct: 1 MFEYLILGALVVIIVGVFMVLTKQRPANNDINSELNEHHRKILQ--DFNDSLNKTTDRFN 58 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQ--FENL 118 +L++ E + + + +L+ +E+ +++A +K+ Q + ++ ++ ++ +L Sbjct: 59 --KLVSEEFKYNRDVLENLKVSQQEIINQLKAE---VVEKLNQALQNQGKIQQESIQSSL 113 Query: 119 ANRIFE--HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRN 176 N + S + + L + + E+L+ ++ ++F + T I Sbjct: 114 KNTTLQLLASIESLTKSVDSRLEEITGKVHERLEEGFKKTNETFLSVMERLAT----IDE 169 Query: 177 LQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR 236 Q+ + ++L L GD +++G +GE+ L +++ + + Q S +N + Sbjct: 170 AQKKIDGLTTNVVSLQE-LLGDKRSRGAYGELQLESLVKNILPPDS--FSFQHSFKNGS- 225 Query: 237 SRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLL 294 + D ++ LP+ V +D+K + Y++ F++ + + A ++ VR HI + Sbjct: 226 ---RADCVLFLPEPTGTVAVDSKFPMENYQKMFDSSLSEPEKIKAEKQFKLDVRKHITDI 282 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K + T D +MF+P E F PELI ++L + + +VSPTTL+ L T Sbjct: 283 STK---YIIPDETSDGAVMFVPAEAVFAEIHAYHPELIQDSLNHKVWVVSPTTLMAVLNT 339 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 + + + I KL + F M + ++ A +N Sbjct: 340 ARAVLKDVETRKQVHIIKAELGKLGKEFERFDQRMKKLADNIRMAHEN 387 >UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDH1_9FIRM Length = 369 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 70/366 (19%), Positives = 149/366 (40%), Gaps = 27/366 (7%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSE---QFENLANRIFEHSNRRV 130 + + +++E+ E QQ A + ++Q+L E QF+ + + Sbjct: 23 TKSNKQNGNMKEMLLESEKRQQEA------LFETQQKLQEAIVQFQTTMTNSVKQDLAHL 76 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 +E Q L ++ + E L + F + + L +L++L+ + Sbjct: 77 NETTTQHLYTIQKGVNENLSVGYDKTSKVFSQVLERMGKLDESQNSLKELSMSITH---- 132 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 +++ D KT+G +GE+ L +LE + + Y Q + N + + D ++ + Sbjct: 133 -LQSILTDKKTRGIFGEIELYSLLETAMGTDEKRYAKQYKLSNGSIA----DAVLFASEP 187 Query: 251 -KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 + + ID+K L Y R + R+ ++ V+ HI+ + K + T Sbjct: 188 LRMIAIDSKFPLENYNRIMQEDISKEERKRLQNAFVSDVKKHIKAIADK---YIIAHETA 244 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++ +F+P E F L+ + + + LVSPTTL+ + I ++ ++ N Sbjct: 245 EFAYLFLPAEAVFSYIHANCDALVQYSYEQKVYLVSPTTLMAYITAIKAIYLGVQRNENV 304 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 QI D +L + F ++ +K + MK +S +L + + + Sbjct: 305 AQIQDALKRLQVEFDRFEKRYQSVSNDFEKVYQD----MKLVSITANKLLTRFKEIEAVE 360 Query: 429 VEIKRE 434 ++ K+E Sbjct: 361 LDKKKE 366 >UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1U3_ERYRH Length = 430 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 76/393 (19%), Positives = 147/393 (37%), Gaps = 21/393 (5%) Query: 39 EEMVAELSAAKQQITQSEHWRAECE--LLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 + E + Q Q + +N V + T RM+ Sbjct: 40 QRNSVENETLQNQFAQLKDLMMSQANNTINQMVAFDFESREKTSDKFNQFTDRMDLRFND 99 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 + R F + N + ++ E + L + + + LD ++ Sbjct: 100 LTQRNIVFEKEVNRALILFHDKMNLQLDQQFTKLTESVEKRLLLMDEKVNQSLDQGFKKT 159 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL-E 215 D+F + I Q+ ++ E ++L L D KT+G +GEV L ++L Sbjct: 160 NDTFTNIVERLSK----IDEAQKKIDALSVEIVSLQDVLT-DKKTRGTFGEVQLHQILAS 214 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DD 273 G + Y+ Q ++ ++PD ++ P+ +VID+K L Y R + + Sbjct: 215 IFGDKNDRIYQMQYNLSPG----VRPDAVLFAPEPLGTLVIDSKFPLENYRRMIDKSLET 270 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 R++A ++ + + HI + K + T D LMF+P E F +++ Sbjct: 271 SQRQNAERQFVLDCKKHIDAIADK---YIIPGTTSDQALMFVPAEAVFATINAYHSDILD 327 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 A + + LVSPTTL+ L TI + + + A I D +L + + + Sbjct: 328 YAQRKRVWLVSPTTLMSTLTTIQTILVNLEREKYASVIHDELKRLNVEFDRYRLRWDNLS 387 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 + ++ Q +K L + ++ E+ Sbjct: 388 KHIENV----NQDVKDLHITSRKISSRFESISE 416 >UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDE0_9SPHN Length = 437 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 79/422 (18%), Positives = 162/422 (38%), Gaps = 32/422 (7%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E++++ + ++Q+ + E L L+ T + + + + + D Sbjct: 35 ELLSQFATLEKQVGELPGTLREEARLGR--DELRGQLTDMRKEAADGRREQQFGLEKVTD 92 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQD 158 KI Q+I E + + ++ +N Q L + + E+L G +++ + Sbjct: 93 KIGQLIEKNDERQEALRQAVSDSLD----KLRTENSQKLEKMRETVDEKLQGTLEKRLGE 148 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 SF + + + +Q +A +L R L G+ K++G WGEV L +LE Sbjct: 149 SFKLVSDRLEQVHQGLGEMQ----NLATGVGDLKRVL-GNVKSRGGWGEVQLGMLLED-- 201 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAED 272 + ++ET V I + + + +RLP + IDAK Y+R A++ Sbjct: 202 MLTRDQFETNVKIRPSSGEMV--EFAIRLPGRSGEDEPLWLPIDAKFPHEDYDRLLVAQE 259 Query: 273 DYTRE---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 E A ++R + + K Y P + D+ +M++P E F + R Sbjct: 260 AGIGEDVDKAAAALERAIRLQAKTISEK-YVHPP--HSTDFAIMYLPTEGLFAEVIRRPG 316 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 + K+ +M+ PTTL L ++ +R + + ++ + + Sbjct: 317 LAMELQSKHRVMVQGPTTLAALLTSLQMGFRTLAIEKRSSEVWQVLGAAKAEFEKYGQVW 376 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +G+ LD A+ +A ++ V + L E+ ++E +E Sbjct: 377 EKLGKQLDTAKRTVDEAGRR----TRVVTRKLRDVESLEGPQTSELLELVSEGEDGPGDE 432 Query: 450 YR 451 Sbjct: 433 MD 434 >UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SND8_9FIRM Length = 403 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 81/437 (18%), Positives = 164/437 (37%), Gaps = 41/437 (9%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECE 63 ++ +I LV AI + + +E++ + K ++ S+ + E Sbjct: 3 YLLTGVLILLVIFAIVLILKLLK---------KSNDEIIKDEDILKLKLGFSDEFNKLNE 53 Query: 64 LLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIF 123 LN + N LE ++A +++ D + L + F NL Sbjct: 54 KLNGNNEKIS--NQLLEFKNSTNDNILKAGKENIDSIFNFNDKLKSELKKDFLNL----- 106 Query: 124 EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 L+ + + +L+ + +F Q L + ++ L+ Sbjct: 107 -------TVVVEGRLDKINESVEVKLEKSFEDTKKTFSNVMQSLGRLDEAQKKMEFLSNN 159 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 + LT D KT+G +GEV L +VL ++ Y+ Q + N + D Sbjct: 160 VQNLNNVLT-----DKKTRGIFGEVQLYQVLSSAFGNNSEIYQKQYKLSNGTMA----DA 210 Query: 244 IVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 ++ P+ + ID+K L Y R F + E+ + +++ HI + K + Sbjct: 211 VIFAPEPVGTICIDSKFPLENYRRIFEDISENKLEN-EKNFEQNLKKHIDDISSK---YI 266 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 T D ++F+P E F P+ + A + + SPTT++ L TI + + Sbjct: 267 IKNETTDQAILFLPAEAIFAYLNAYMPKTVEYAYSRRVWITSPTTMMAILTTIQAVSQNL 326 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 QS+ A +I + L D+ + + + ++K + +K + + + + + Sbjct: 327 KQSQYALEIQKELNSLSDEFERYAKRWETLEKDINKVSKD----VKDIFTTSTKITRRFD 382 Query: 423 AFRGLGVEIKREINPDL 439 + + V K E L Sbjct: 383 NIKNVDVFEKEEAEEVL 399 >UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6M2_COPPD Length = 434 Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats. Identities = 79/438 (18%), Positives = 179/438 (40%), Gaps = 30/438 (6%) Query: 10 VIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQ---QITQSEHWRAECELLN 66 +IAL+ +AI + + + L E+ +L + + + ++ E L N Sbjct: 2 IIALLQIAIYVAVTKRREDPELIKFLTGLEDNQKQLESLIKDGMKSSKEEMTNLVANLAN 61 Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHS 126 ++ +N+++ ++ E+ + ++ D + + + +E+ N E Sbjct: 62 MITTNISEMNSTITKNISEMGISQQNLIKNFSDTVSSLADK----TEERLNRMRDTIEAK 117 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + + ++N L + + E+L ++ +SF ++ + + +Q + Sbjct: 118 LKEIQDENSSKLEQMRQTVDEKLQSTLNARISESFKLVSERLEQVHSGLGEVQS----LV 173 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 + +L + L + KT+G GE L ++E + +YE V + +R ++ V + Sbjct: 174 NDVGDLKKVL-SNIKTRGILGEDQLEAIIEDILVP--GQYEKNVIVRPGSREVVEFAVKI 230 Query: 246 RLPQGKD-----VVIDAKMTLVAYERYFNAED--DYTRESALQEHIASVRNHIRLLGRKD 298 + G + + IDAK + +ER +AE+ D L++ + + R Sbjct: 231 PVENGGNGSYMWLPIDAKFPMEDFERLIDAEERCDTAECERLRKELENRLKQCAKDIRDK 290 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIAN 357 Y P T D+ +MF+P E F AL R+P I + +++ PTTL L ++ Sbjct: 291 YIDPP--NTTDFAIMFLPAESLFAEAL-RKPGFIEVLQRECRVLITGPTTLSAVLNSLRQ 347 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 ++ + A+++ + ++ F D + + + L +AQ+ A +K + Sbjct: 348 GFKIFAIEKKAEEVWKLLGAVKTEVGKFGDLLEKVNKKLQEAQNVIEDASRK----TRTI 403 Query: 418 LAQAEAFRGLGVEIKREI 435 + + E E+ Sbjct: 404 DRKLRNVEEISPEETAEL 421 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats. Identities = 67/319 (21%), Positives = 137/319 (42%), Gaps = 24/319 (7%) Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERH 168 L+E R E + + N++ L+ + S + E+L +++ +SF + + Sbjct: 111 ELNENKIENMRRSMEEKVNNMQQNNQKKLDEIRSAVEEKLQSTLEKRLGESFKLVSNQLE 170 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 + + +Q +A +L + L + KT+G WGEV L +L E ++ Sbjct: 171 MVYKGLGEMQ----NLATGVGDLKKVLT-NVKTKGTWGEVQLGNILRQILSEE--QFVEN 223 Query: 229 VSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYTR---ESA 279 I D + + + ++LP D + IDAK+ L+ Y + ++ + E Sbjct: 224 SKI--DPLNNNRVEYALKLPNKDDENSNTLLPIDAKLPLIEYHKLIEFYENADKDNIEKQ 281 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK-N 338 L+ +V+ + + K Y + P + D+ ++F+PVE + + R P LI + + Sbjct: 282 LKILENAVKKEAKSINEK-YIKPP--HSTDFAVLFLPVEGLYAEII-RIPGLIDKLQRDY 337 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 +++ SPTTL+ L +I ++ + + ++ + + F+ +S LD+ Sbjct: 338 RVVITSPTTLIALLNSIQMGFKTLAIEKRSNEVWKLLDTVKHEFSNFVGILSKTKVKLDQ 397 Query: 399 AQDNYRQAMKKLSSGRGNV 417 A A K +G G Sbjct: 398 ASKAIGDAEYKAGAGTGKT 416 >UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepID=A3RWT8_RALSO Length = 489 Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats. Identities = 88/452 (19%), Positives = 174/452 (38%), Gaps = 42/452 (9%) Query: 21 LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS-L 79 L + ++ + A Q + + + + ++ L NT L Sbjct: 56 LRGQIAETARIGRSDVSQQLGQFQQVLATQLTSVATVQNNQIDTFAQQLTKLTESNTQQL 115 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINS-EQRLSEQFENLANRI------FEHSNRRVDE 132 EA + + + + ++ +R+ + +Q+L++ E R+ E + ++ Sbjct: 116 EAVRQSLQVQAQQGREEQAGALRRFGETMQQQLAQLAEGNERRLAEVRATLEQKLKDIEA 175 Query: 133 QNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 N L+ + + E+L +++ +SF + + + +Q +AQ +L Sbjct: 176 NNATKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQA----LAQGVGDL 231 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 + L + KT+G WGEV L +LE E Y+ ++E + + + +RLP Sbjct: 232 KKVLT-NVKTRGTWGEVQLEMLLEQMLTPEQYD----KNVETVRGTGARVEFAIRLPGKT 286 Query: 252 D--------VVIDAKMTLVAYERYFNAEDDYTRESAL---QEHIASVRNHIRLLGRKDYQ 300 D + IDAK YER +A++ E A +E +VR + + K Y Sbjct: 287 DADRDATVWLPIDAKFPKEQYERLLDAQERADAEGATVASRELEVAVRKEAQTIHEK-YI 345 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN-NIMLVSPTTLLVALRTIANLW 359 P T D+ ++F+P E + L R P L E + + + PTTL L ++ + Sbjct: 346 APPD--TTDFAILFLPTEGLYAEVLRR-PGLTDELQRKFRVTVAGPTTLTAILNSLQMGF 402 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R + + ++ + + F D ++A ++L++A N QA Sbjct: 403 RTLALEKRSSEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQA-------EVRTRQ 455 Query: 420 QAEAFRGLGVEIKREINPDL-AEQAVSQDEEY 450 + + L E A QD+ Sbjct: 456 MNRKLKAVEALPSDSAQTLLGLETAGQQDDAE 487 >UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQV3_9MOLU Length = 339 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 47/233 (20%), Positives = 105/233 (45%), Gaps = 10/233 (4%) Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 ++ + Q L + + K++GNWGE L +L +ETQ S++N Sbjct: 93 KEQTNNITQRINAL-NDIMVNKKSRGNWGEYQLNNLLSVYAGDNQSIFETQYSLKNGYIG 151 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED-DYTRESALQEHIASVRNHIRLLGR 296 DV +++P K ++ID+K L + + + E + + ++ HI + + Sbjct: 152 ----DVALKIPGEKVLIIDSKFPLENFRKLDSVESAENDIKKFESAFKQDIKKHINDISK 207 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K T++ +MFIP E ++ + ELI A +++L PTTL+ + T+ Sbjct: 208 KYITS----ETIENAVMFIPSEAIYMEVCAKYSELIEYAHHKHVLLTCPTTLIGVVFTLI 263 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 N+ + +++++ + + +Y+ + + + + +++K Y++ Sbjct: 264 NITKDFNRNKHIKSLEKEIVAMYNDSQRMMTRLEGLSNTIEKLDKCYKEVFTS 316 >UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CUJ7_VARPS Length = 455 Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats. Identities = 93/445 (20%), Positives = 168/445 (37%), Gaps = 40/445 (8%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL 79 WL A Q A +E LA M ++++ E + ++ + +L Sbjct: 23 WLLARRQPAPDHSELLAVLSAMGTANERTERELRH-EIGESSRGARQETAQAFATFQQAL 81 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINS-EQRLSEQFENLANR----------IFEHSNR 128 E T A ++ + + L+ Q + L+ E Sbjct: 82 VQQGAEATRTQNAQLDAFSLQLASLQKTLADTLNTQLQGLSESNARRLSEVRATMEAQLA 141 Query: 129 RVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 ++ + N L+ + + E+L ++ +SF + A + + +Q +A Sbjct: 142 QLQQSNTAKLDEMRKTVDEKLQSTLEARLGESFKQVADRLEQVHKGLGEMQT----LAVG 197 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 +L R L + KT+G +GEV L +LE E +Y Q IE RS + D +R Sbjct: 198 VGSLQRVLT-NVKTRGVFGEVQLEALLEQVLTPE--QYAKQ--IETKPRSGQRVDFAIRF 252 Query: 248 PQGKD------VVIDAKMTLVAYERYFNAEDDYT---RESALQEHIASVRNHIRLLGRKD 298 P D + IDAK YER +A + E A + A +R R + + Sbjct: 253 PGRGDDGAPVWLPIDAKFPRDDYERLIDAHERADAPGAELAAKALEARIRVEARSIAE-N 311 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIAN 357 Y P T D+ ++F+PVE + L R P L+ ++ + L PTTLL L ++ Sbjct: 312 YLAAP--HTTDFAILFLPVESLYAEVLRR-PGLMDAIQRQHRVTLAGPTTLLAMLNSLHM 368 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 +R + A ++ + + + + +S I + + KA D +A + + Sbjct: 369 GFRTLALEQQASEVWKVLGAVKTEFERYGEWVSRIKEQVAKASDTLDKA----DTRAKQM 424 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQ 442 L + + P A+ Sbjct: 425 RLALRKVEALPEAEAQVLLPPTADS 449 >UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH n=63 Tax=Alphaproteobacteria RepID=B2SC22_BRUA1 Length = 407 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 78/376 (20%), Positives = 165/376 (43%), Gaps = 34/376 (9%) Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 + E + A+ ++ +++ ++ + + + +A +F +++ R+ L+ + + Sbjct: 54 EAQAEDRARDAEYRMAEILKAQAEMQGRMQTMA-EVFGSRQAELNQSIRERLDGMTHRIG 112 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 + + R ++ K + + N+Q L Q+ Q +A+ + +T+G +G Sbjct: 113 QTMTEQTRSTHENLAKLQERLAVIDTAQNNIQSLAGQVVQ-----LQAILANKQTRGAFG 167 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYE 265 + + ++ A GL +G YE Q ++ N +PD +VR+P +VIDAK L A+ Sbjct: 168 QSRMEAII-ADGLPQGA-YEFQATLSNST----RPDCLVRMPNNAPSLVIDAKFPLEAWN 221 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 E R++A+ + + HI+ + K L T D +F+P E F Sbjct: 222 AMRETEQPEARKAAVAQFRRDMEIHIKDVSDK---YLIPGETQDTAFLFVPSESIFADIH 278 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 + LI A + +++VSP+ L+++++ I + + A I +L Sbjct: 279 EHFEALIQRAHRARVVVVSPSLLMLSIQVIQAILKDARMREQAHVIQGEVIRL------- 331 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR-EINPDLAEQAV 444 ++D+ + + + K Q ++ QA K + +L + G +I+ E P AE Sbjct: 332 MEDVGRLDERVRKLQTHFIQANKDIDD----ILVSSSKVTKRGAKIEALEFGPPPAE--- 384 Query: 445 SQDEEYRLRSVPEQPN 460 E R ++ P +P Sbjct: 385 ---EPSRPQARPAEPG 397 >UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4S1_JONDD Length = 465 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 174/451 (38%), Gaps = 50/451 (11%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD I+V + ++V + + L+ +E ++AA + Sbjct: 1 MDVLILVLVIASIVLGVVNLVAVRAGSHDTG---LSMQELESIRMAAAAGNGDIRQDLSV 57 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTR------------MEAAQQHADDKIRQ-MINS 107 + L+ + + T + RE R +E Q ++++ + S Sbjct: 58 QRTELSQTLAHQDAARTQAQTRFREDVERQLDEFAQRNALALEKIQAAVGERLQLSLSES 117 Query: 108 EQRLSEQFENLANR----------IFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQV 156 R ++ + LA R + ++ N L + + E+L G +++ Sbjct: 118 RDRTTKVLQELAERNAVSHRELQQVLREELEKLRAGNEAKLEKMRETVDEKLQGTLEKRL 177 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 DSF +Q + + +Q +A + L R L + K +G WGEV L+R LE Sbjct: 178 GDSFAIVSQRLEEVHKGLGEMQ----NLASDVGGLKRVLT-NVKNRGGWGEVQLSRQLED 232 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNA 270 RE +Y + I+ ++ + + V++P + ID+K YER A Sbjct: 233 FLTRE--QYAENIIIKEHSQESV--EFAVKMPGRDPEGSEVYLPIDSKFPQEDYERLLEA 288 Query: 271 EDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 ++ R ++ + +V + + K Y P R+ D+ +M++P E F + R Sbjct: 289 QELGDRAAIDASAKALERAVVEQAKKISDK-YISPP--RSTDFAIMYLPTEGLFAEVVRR 345 Query: 328 QPELITEAL-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P L + + +++ PTTL+ L ++ +R + + ++ + R + Sbjct: 346 -PGLASRLQNDHRVLITGPTTLMSLLNSLQLGFRTLAIEKRSSEVWQILGAAKAEFRKYG 404 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 D +G+ L Q +A ++ + + Sbjct: 405 DVWEKLGKQLATTQRTVEEAGRRTRAVERRL 435 >UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID=C9KWE1_9BACE Length = 410 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 82/403 (20%), Positives = 157/403 (38%), Gaps = 37/403 (9%) Query: 67 NEVRSLQSINTSLEADLREVTTRM-EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 N + + +L ++E + + ++ + + + + Q+L + E Sbjct: 25 NNQTQAEQLQIALRQQMQENREELNRSIRELRMEMTQTLNQNMQQLQDVLHKNMMTTGEL 84 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER---------HTLTHEIRN 176 ++ D RQ +L+ ++LD R V++ K ER L + + Sbjct: 85 QRQKFDMMARQQ-ETLIKSTEKRLDDMRLMVEEKLQKTLNERIGQSFEIVRSQLENVQKG 143 Query: 177 LQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR 236 L ++ +AQ+ L + L + K +G +GEV L +LE E Y+ +++ Sbjct: 144 LGEM-KSLAQDVGGLKKVL-SNVKMRGTFGEVQLGALLEQMMSPEQYD----ANVKTKKS 197 Query: 237 SRMQPDVIVRLPQGKD------VVIDAKMTLVAYERY---FNAEDDYTRESALQEHIASV 287 + ++LP D + IDAK YE+Y F A D ES+ ++ ++ Sbjct: 198 GTEFVEFAIKLPGKDDANSTVYLPIDAKFPKDIYEQYYDAFEAGDTALMESSGKQLENTI 257 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + + + K Y P T D+ +MF+P E + + R + T + I++ PTT Sbjct: 258 KKMAKDIHDK-YVDPP--FTTDFAIMFLPFESIYAEVIRRTSLVETLQKEYKIVVTGPTT 314 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L L ++ +R I R +++ + + G L+K Q N + A Sbjct: 315 LGAILNSLQMGFR-------TLAIQKRTGEVWTVLGAVKTEFGKFGGLLEKVQKNLQSAG 367 Query: 408 KKLSSGRG-NVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +L G A R + E L + ++EE Sbjct: 368 DQLEEVMGKRTRAIERKLRQVEQLPHEESRKILPIDGIEEEEE 410 >UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LRQ6_SYNAS Length = 421 Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats. Identities = 80/434 (18%), Positives = 174/434 (40%), Gaps = 47/434 (10%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECE 63 ++++ V+A +GV + L ++ A + E +++ ++ + E R E Sbjct: 5 ALIIVLVLAAIGVILQ-LVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRNREE 63 Query: 64 LLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIF 123 + + +S + + +L + + ++ + + K+ M + Sbjct: 64 SAHAQRQSREELAGALRSVGDTLNQQLMDLTRTNEGKLDAMRIT---------------V 108 Query: 124 EHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 E + + N L+ + S + E+L G +++ +SF + ++ + + +Q Sbjct: 109 EEKLQTLQIDNAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGLGEMQT--- 165 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 +A +L + L + KT+G WGEV L +LE + +Y T ++ + + + Sbjct: 166 -LAAGVGDLKKVL-SNVKTRGVWGEVQLGAMLEQVLHPD--QYATNLATKEGG---ERVE 218 Query: 243 VIVRLPQGKD-------VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 V+LP + + IDAK + Y R +A + ES ++ + N IR Sbjct: 219 FAVKLPGRGEEQDEAVWLPIDAKFPMEDYLRLLDAREKVETES-MEIAARHLDNRIRQCA 277 Query: 296 RK---DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 R Y P +T D+ ++F+P E F R T + +++ PTTL L Sbjct: 278 RDICEKYLNPP--QTTDFAILFLPTEGLFAEVARRTGLTETLQREWRVVIAGPTTLWSIL 335 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 ++ +R I R+S++++ + + + G+ L+K Q +A L Sbjct: 336 NSLQMGFR-------TLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEASDALDK 388 Query: 413 GRGNVLAQAEAFRG 426 + + + Sbjct: 389 AQTRTRVIGKKLKD 402 >UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD6C Length = 302 Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 111/267 (41%), Gaps = 25/267 (9%) Query: 153 RRQVQDSFGKEAQERHTLTHE----IRNLQQLNAQMAQEAINLT---------RALKGDN 199 + ++ + + +L + I L + N + Q + + + + Sbjct: 24 QMKIHEKMIQTEAAHSSLDGQYNSIISLLNETNRSLGQSDVKINHMVDGMHEINVIMTNT 83 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAK 258 K +G +GE L +L + YE Q + N D + LP K ++ID+K Sbjct: 84 KKRGTFGEYQLYHILSLYCGDNQHIYEEQYHLSNGKIG----DAALHLPGNTKVLIIDSK 139 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 + Y + + D + ++ E +V+ HI + K + TL+ +MFIP E Sbjct: 140 FPMENYLKIVDNPKDISYQN---EFKKNVKKHIDDISNKYITE----ETLEEAVMFIPSE 192 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 +L D +L A +++ SP+TL+ + T+ N+ + ++S N ++I + KL Sbjct: 193 AIYLYLCDECADLYDYAHNKKVLMTSPSTLMGVVFTLINITKDFNRSENIKEIEKQIIKL 252 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 D + ++L+ + + ++ Sbjct: 253 KSDTDRLDDRYGKVMKNLNTLEKSLKE 279 >UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE59_ACHLI Length = 364 Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 15/332 (4%) Query: 93 AQQHADDKIRQMI-NSEQRLSEQFENLANRI-FEHSNRRVDEQNRQSLNSLLSPLREQLD 150 QQ KI + + + L +Q NL +++ E + E LN L + ++++ Sbjct: 30 QQQEILSKIEYLKTDFKTELDKQ--NLQSQLELERTINYFKEAISTKLNVDLQSMNDKVE 87 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 ++ S K I Q+ ++ +L L D K +G +GE+ L Sbjct: 88 TRLKEGFQSSDKLFSSMLEKLTIIDTTQKNIENLSGHVNDLKSYL-SDKKLRGMYGELQL 146 Query: 211 TRVLEA-SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYERYF 268 ++LE G + Q + N + D IV ++ ID+K +L Y R + Sbjct: 147 YQILENVFGENNKTLFTKQHKLSN----QTVVDAIVYGSGDALNIPIDSKFSLENYIRMY 202 Query: 269 NAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 ++ +D R++A + +++ HI + + + T DY LMFIP E F Sbjct: 203 DSNLEDSERKNASKLFEQNIKKHIDDIASR---YIIKNETTDYALMFIPSEAVFSEIQAN 259 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 L+ A K + + SPTTL+ L I + + + +NA+++ D +KLY+ RL + Sbjct: 260 YIHLVEYASKKKVWITSPTTLVYMLTMILVINQDLEKEKNAEKMLDEINKLYNDFRLVFE 319 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + + + + + ++ R M ++ NV Sbjct: 320 RFNTLEKDIQRLSESIRTLMIPMNRLNKNVYK 351 >UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M651_9BACT Length = 439 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 87/412 (21%), Positives = 174/412 (42%), Gaps = 35/412 (8%) Query: 52 ITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTT---RMEAAQQHADDKIR-----Q 103 + Q E E L S + + +L++ R R+ Q + + Q Sbjct: 45 LLQEEMKDQRAEALQRGAESSRDVRDALDSYGRRAAESFDRLSGLQTRQMESLERHTTDQ 104 Query: 104 MINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGK 162 +++ +QRL EQ LA + R++ +N + ++ L + E+L+ R++ DSF + Sbjct: 105 LLSVQQRLGEQETKLA-----EALARLESENSRRVDELRQAVSERLETTLSRRLGDSFAQ 159 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 + + + + +Q +A + +L R L G KT+G WGEV L +L + Sbjct: 160 VSGQLEAVQRGLGEMQ----GLAGDVGDLQRTLTG-VKTRGTWGEVQLESLLSQ--ILAP 212 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAE---DD 273 +YE V+++ D+ + D +++P G + +DAK L +YER A D Sbjct: 213 AQYERSVALDPDSAE--RVDFGLKIPTGDPDEPPLWLPLDAKFPLASYERLLAARERGDA 270 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 + +E I ++ + RK Y + P T D+ L+F+P E + AL L + Sbjct: 271 DGEAAGRRELIKALDLQAASV-RKKYVRPP--VTTDFALLFLPSESLYAEALRDPSTLPS 327 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 ++ ++ V PTTL L ++ +R SR + ++ + + F + + + Sbjct: 328 LQERHRVVPVGPTTLAALLNSLRLGFRALAISRRSGEVWRILGDVKTEFARFGEVLERVR 387 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 + L A ++ + ++ + + + G E + +A+ Sbjct: 388 KQLGAAANSIEETGRRTRAMERRLEGVERSDEPEGREPEGPAPSHKKAEALR 439 >UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8T4_9RHOB Length = 413 Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 73/384 (19%), Positives = 148/384 (38%), Gaps = 29/384 (7%) Query: 79 LEADLREVTTRMEAAQQHADD---KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 L A L V Q+ A D + +++ S+ ++ + + +A +F + Sbjct: 43 LRAKLNRVRVTSALEQKQAADTEAALAELVRSQGEMTGRMQTMA-EVFGSRQSDLMRVVN 101 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 L+ L L + RQ S + L + + +L Q+ +L L Sbjct: 102 DRLDGLGKTLGASVLETHRQTHASLTGLQERMALLDKANKTMGELAGQVT----DLQMVL 157 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVV 254 D +++G +G+ + +++ + + Q ++ N R +PD ++ +P G +V Sbjct: 158 -NDKQSRGAFGQGRMEAIIDDA--LPPTSFSFQSTLSN----RSRPDCLIHMPTGAPPLV 210 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 +DAK L A+ +AE + A + H+ + K L T D LMF Sbjct: 211 VDAKFPLEAFAAIKDAETKPELKEAANRFRKDISKHLEDIAGK---YLLPGETQDTALMF 267 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 +P E F + P+L +A + +++VSP+ L++A++ I ++ R A I Sbjct: 268 VPSESLFAEIHEGFPDLTQKAHRLRVVIVSPSLLVLAVQVIQSVLRDARMREQAHLIQAE 327 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG--LGVEIK 432 KL + + +S + + + Q M + +A LG + Sbjct: 328 VGKLLLDVGRLTERVSKLQNHFAQTNKDLDQIMIS----GDKISNRARKIDEMQLGGKAS 383 Query: 433 REINPDLAEQ----AVSQDEEYRL 452 + ++ ++ DE Sbjct: 384 EPVTSSASQAPQTTHLADDELPSP 407 >UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=cellular organisms RepID=RMUC_XYLFT Length = 456 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 89/434 (20%), Positives = 168/434 (38%), Gaps = 28/434 (6%) Query: 2 DFSIMVYAVIALVGVAIGWLFASYQHAQQ----KAEQLAEREEMVAELSAA--KQQITQS 55 DF I+ + ++ + I L H + E R E+ +L +Q++ + Sbjct: 4 DFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEVRLA 63 Query: 56 EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQF 115 R+ +L+ + L + SL D R+ QQ D + Q + + + Q Sbjct: 64 SFARSLTDLVARIDQRLDQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRNAQS 123 Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 N E + N Q L + + + E+L DS K ER L R Sbjct: 124 INEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTTLNTRLDSSFKLVSER--LEQVQR 181 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 L ++ Q+A +L R L K++G WGEV L +L+ + +E +Y V + DA Sbjct: 182 GLGEMQ-QLATGVGDLKRVLTH-VKSRGTWGEVQLDNILDQTLTQE--QYARGVRVCPDA 237 Query: 236 RSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYTRE---SALQEHIAS 286 D VRLP + ID K YER +A++ +E + + + Sbjct: 238 SE--IVDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLERA 295 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSP 345 ++ + + K Y P T D+ +MF+P E + + R P L + +++ P Sbjct: 296 IKIQAKSIRDK-YIVPP--HTTDFAVMFLPTEGLYAETIRR-PGLADVLQREYRVVVAGP 351 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TT+ L ++ +R + + ++ + + F + + ++ + + Sbjct: 352 TTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEKQINTVGKSLGE 411 Query: 406 AMKKLSSGRGNVLA 419 A +K + + Sbjct: 412 AGRKTRTIERRLRG 425 >UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B6JJP9_OLICO Length = 400 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 72/355 (20%), Positives = 146/355 (41%), Gaps = 23/355 (6%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 R + ++ + +R + R+ E + LA R E + + L+S+ Sbjct: 50 AQAIRADEMEERLSEVLRIQNEAAGRVHEMGQALAGRQTEMARA-----VNERLDSVTQR 104 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 + + ++ R +S + + + +NL L Q+ R + + + +G Sbjct: 105 VGQSMEQTTRNTMESLRALHERLGIIDNAHKNLTDLTTQVTT-----LRDVLANKQARGA 159 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 +G+ + ++ GL +G + Q ++ N+ +PD +V LP + + IDAK L A Sbjct: 160 FGQARMEAIV-QDGLPKGA-FAFQHTLSNNK----RPDCVVFLPDQRPLCIDAKFPLEAV 213 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 A+ D R+ A Q V H+ + K L T D LMF+P E + Sbjct: 214 TALREAKSDDARKLAAQRLRQDVMKHVSDIAGK---YLIAGETQDTALMFVPSESVYAEI 270 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 D +++ +A + I+LVSP+ L++A++ + + + A QI + + Sbjct: 271 HDGFDDVVQKAYRARIVLVSPSLLMLAIQVMQQIMKDARMRDAADQIRTEVMNMMGDVER 330 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 D +S +G D+ ++ RQ + ++ + +A L + +P Sbjct: 331 LRDRVSKLGSHFDQVSEDVRQVLISVN----KIGKRAVKIEELDFGQTEDASPPA 381 >UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6U8_9RHIZ Length = 390 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 70/331 (21%), Positives = 142/331 (42%), Gaps = 20/331 (6%) Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 + + ++ ++ L+ + + + + + L+ L S + + + + Sbjct: 65 AEGLDAVLRAQSELAGRLQTM-TEVLGSRQAELTSTLAGRLDGLTSSVGRSIMATGSETK 123 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 D+ ER + I + Q Q+A L L GD +++G +GE+ + ++ + Sbjct: 124 DTLSA-LGERLAI---IDDAQNRIGQLASGISKLQDIL-GDKQSRGAFGELRMQTIVADA 178 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTR 276 G Y Q ++ N +PD ++ +P G +V+DAK L AY AE + Sbjct: 179 LPANG--YRMQATLSNGK----RPDCLIEMPNGAPPLVVDAKFPLDAYAALSAAETPEAK 232 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 + A+ + HIR + K L TLD LMF+P E F L + P++I +A Sbjct: 233 QFAMSRMRRDMDVHIRAVSAK---YLIPNETLDTALMFVPSETIFALLGESFPDIIQKAF 289 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 + +++VSPT L+++++ I NL + A +I L +++ D +SA+ Sbjct: 290 RARVVIVSPTLLMLSIQVIQNLLKDARVREEASRIQRETQHLGEEIARLNDRVSALKNHF 349 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 ++ + Q + ++ + + L Sbjct: 350 GRSARDIDQILISTE----KIVRRVDRIGEL 376 >UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K3_RALEH Length = 495 Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats. Identities = 72/413 (17%), Positives = 154/413 (37%), Gaps = 34/413 (8%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + AQQ + ++ + + + +L R L+ + L ++ Sbjct: 71 ESAQQMLRFQQALSSQLTGIATLQNNQIDTFA-QQLAKLTETNTRQLEQVRQHLMLQGQQ 129 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + D ++Q + +E+ E + ++ N L + + Sbjct: 130 ARDEQAGTLRRFGDGLQQQLAQMSEANERRLAEVRATLEKKLQDIEANNAAKLEEMRRTV 189 Query: 146 REQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 E+L +++ +SF ++ + + +Q +AQ +L + L + K++G Sbjct: 190 DEKLHATLEQRLGESFRLVSERLEQVHRGLGEMQ----VLAQGVGDLKKVLT-NVKSRGT 244 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD--------VVID 256 WGEV L +LE + +Y V ++ + + + +RLP + +D Sbjct: 245 WGEVQLEMLLEQ--MLTPEQYGKNVETVRNSGA--RVEFAIRLPGKAAGGDNAPVWLPVD 300 Query: 257 AKMTLVAYERYFNAEDDYTRESAL---QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 AK YER +A++ + L +E ++R + + K L +T D+ ++ Sbjct: 301 AKFPKEQYERLVDAQERGDPDGVLAFGRELEVALRREAQTIAEK---YLSPPQTTDFAIL 357 Query: 314 FIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 F+P E + L R P L + + PTTL L ++ +R + Sbjct: 358 FLPTEGLYAEVLRR-PGLTDLMQRDYRVTVAGPTTLTALLNSLQMGFR-------TLALE 409 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 R+S++++ + + G L K +D +A + + A R Sbjct: 410 KRSSEVWEVLGAVKTEFGKFGDVLAKTRDTLERAARNIEQAEVRTRQMARKLR 462 >UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus lactis RepID=D2BLP2_LACLK Length = 434 Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats. Identities = 74/406 (18%), Positives = 163/406 (40%), Gaps = 52/406 (12%) Query: 25 YQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLR 84 Q AQ + E + + + SA + I W+ + +L N+ + L+ I+ SL Sbjct: 49 QQLAQNRQELSSSLRSVNNDFSALTENINSKFDWQFK-DLQNSNEQKLEKISVSLVESTD 107 Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 +++ + K F+H + + + N + L+ + Sbjct: 108 RTVSKLSELTESITAK----------------------FDHKFKELQDSNDKRLSQIQET 145 Query: 145 LREQL-DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 + E+L + R++ SF + + + ++ +A + +L + + G KT+G Sbjct: 146 VDEKLQETLNRRISQSFEQVTLHLKNVEEGLGEMR----NLASDVDSLQKVMTG-VKTRG 200 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAK 258 GE+ L R+LE + +Y QV+I+ D + LP D + ID+K Sbjct: 201 IVGEIQLGRILEQ--MFTSSQYREQVNIQGGN----AVDYALILPGKSDDSELLLPIDSK 254 Query: 259 MTLVAYER---YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 + Y+R + D + + +V+ + + K Y P +T D+ +MF+ Sbjct: 255 FPMEDYQRLQMALESNDSLEIDKTRKALFNAVKAQAKSISEK-YIVPP--KTTDFAIMFL 311 Query: 316 PVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 P E F+ ++ PEL + + + PTT+ L ++ ++ + + ++ + Sbjct: 312 PTEGLFMEVVNN-PELYEQISRDYKVNVTGPTTMTAVLNSLQMGFKTLQIEQKSAEVYEL 370 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 + + F + + + L ++ + + L + R NV+ + Sbjct: 371 LGAVKTEFGKFEGSLKKVQERLQQS----EKEISNLITTRTNVMNR 412 >UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYA9_STRM9 Length = 359 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 63/335 (18%), Positives = 136/335 (40%), Gaps = 23/335 (6%) Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN---SLLSPLREQLDGFRRQV 156 K + ++ E+++ I+E E N LN ++ + D + Sbjct: 36 KFEILEKLMEKNERSKEDISKLIYEGKINVTSEINDFKLNMKENITKDVLNLGDKVENVL 95 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLN---AQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +D F + +T+ + + + + +++ E I+L + L D K++G++GE L +V Sbjct: 96 KDGFKISNEAVNTVINRLVKIDETQKNIEKLSTEVISLQKIL-SDKKSRGSFGETRLEQV 154 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRL-PQGKDVVIDAKMTLVAYERYFNAED 272 L YE Q N + D ++ L + V ID+K L Y Y ++ Sbjct: 155 LGYVYGDNNNLYERQYKFSNGKVA----DAVLFLNTKLNKVAIDSKFPLENYILYSENKN 210 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 R +E I ++ HI + K + T++ +MF+P E F+ PE++ Sbjct: 211 VEYR----KEFIKDLKKHIDDISSK---YIIIGETINQAIMFLPSESIFIDIYSEFPEIL 263 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A + + S T L++ + T+ ++ NA++I ++ + + + D + Sbjct: 264 EYAYSKRVWIASQTNLMIYITTMQFSTIEYKRNENAKEILNQLDRFSKEFLRYNDRWQNL 323 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 + + + ++ L+ + + E + L Sbjct: 324 NKDFKRLEKDFND----LNITSDKIAKEFEKIKNL 354 >UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=Bacteria RepID=A4JCN2_BURVG Length = 491 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 78/409 (19%), Positives = 147/409 (35%), Gaps = 46/409 (11%) Query: 42 VAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI 101 + + A Q + + + + ++ L + N +RE R AQQ +++ Sbjct: 79 QLQQTLATQLTSIATVQNNQIDGFAQQLAKLVAGNAQQFDAMRESVQR--QAQQAREEQT 136 Query: 102 RQMINSEQRLSEQFENLANR----------IFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 + L+ Q L E + ++ N L + + E+L Sbjct: 137 VALRLFGDTLNRQLTQLTEANDRRIGEVRATLEQRLKEIETNNAAKLEEMRRTVDEKLHA 196 Query: 152 -FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 +++ +SF + + + +Q +A +L + L + KT+G WGEV L Sbjct: 197 TLEQRLGESFKLVSDRLEQVHRGLGEMQT----LAAGVGDLKKVLT-NVKTRGTWGEVQL 251 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD---------VVIDAKMTL 261 +LE + +Y V+ + + + +RLP + IDAK Sbjct: 252 EALLEQ--MLTPDQYAKNVATVPKSSE--RVEFAIRLPGRDAGTRDAAPVWLPIDAKFPR 307 Query: 262 VAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 YER +A+ D E A + A VR R + K Y P T D+ L+F+P E Sbjct: 308 EDYERLIDAQERADAAAVEEAGRALEARVRMEARTIAEK-YVAPP--HTTDFALLFLPTE 364 Query: 319 PAFLLALDRQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 + L R P L + + + PTTL L ++ +R I R+S+ Sbjct: 365 GLYAEILRR-PGLTDLLQRDYRVTVAGPTTLTALLNSLQMGFR-------TLAIEQRSSE 416 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 ++ + + G L + + + + + + Sbjct: 417 VWQVLGAVKSEFGKFGDVLARTKAQLETVTRSIEAAEQRTRVMGRKLKQ 465 >UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU20_9FLAO Length = 499 Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats. Identities = 85/412 (20%), Positives = 169/412 (41%), Gaps = 26/412 (6%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM-EAAQQHADDKIRQMIN 106 A Q Q E + + L S E + E + + +Q+ D +Q I+ Sbjct: 103 AIQNKRQIEFNQQTVDSTKENRNELSKSLKSFEENFSENIKNLNDLLRQNFGDFNKQQID 162 Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQ 165 + +E +N+ I E + + + E N LN + + E+L +++ +SF + + Sbjct: 163 LNGQATENIKNVEKTI-EKNLKSIREDNTIQLNEMRKTVDEKLQTTLEKRLGESFKQVSD 221 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 + + +Q +A +L + L + KT+G GE L +LE + +Y Sbjct: 222 RLEQVHKGLGEMQ----NIAIGVGDLKKVL-SNVKTRGVLGEYQLENILEQILTPD--QY 274 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAKMTLVAYERYFNAEDDYTRE--- 277 V+ + +++ + + ++LP ++ + ID+K + Y+R +A D +E Sbjct: 275 AKNVATKKGSQANV--EFALKLPGKEEGKEVWMPIDSKFPIEDYDRLLDAFDKGEKEGIE 332 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK 337 SA + + + + + + K Y P T D+ +MF+PVE + L P L + Sbjct: 333 SAQKVLLKKIESFAKSISEK-YIDPP--HTTDFGIMFLPVESLYAEVLRH-PGLFEILQR 388 Query: 338 N-NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 I + PTTL L ++ +R + + ++ D + + + F +S + + L Sbjct: 389 KYKITVTGPTTLSALLNSLQMGFRTLAVQKRSSEVWDILKAVKFEFKEFSGVLSKVHKQL 448 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 + A ++ L E F L + E+ PD + S DE Sbjct: 449 NTASGTLETLRTTRTNVMERKLKDVETFTALESKEILEL-PDSIKVEESDDE 499 >UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B826_THEAS Length = 445 Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats. Identities = 83/454 (18%), Positives = 173/454 (38%), Gaps = 50/454 (11%) Query: 1 MDFSIMVYAVIALVGVAIG---WLFASYQHAQQKAEQLAEREEMVAELSAAKQQI---TQ 54 M++ ++ + + + + W+ + Q + ++ R E A + ++ + Sbjct: 1 MNYLVLALSGLGVSAANLAVSIWILGRVRAQQGEVQRDIRRLEEALSREAGQVRMDMRSL 60 Query: 55 SEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKI-RQMINSEQRLSE 113 E + E+R+L + TS + ++ ME+ Q ++ R + E S Sbjct: 61 REELLKYQQDQRVELRNL--VETSSIRQMDALSRGMESLGQGQASQLERILKGLEASSSR 118 Query: 114 QFENLA-------------NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDS 159 F+ L + R+ N + L+ + + E+L G R++ ++ Sbjct: 119 VFQGLGTMNESVLSGLSRVQEVLAEGMERIRRGNEEKLDRMRDVVEEKLQGALERRLGEA 178 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 F ++ + + ++ +A + +L R L + K++G WGE+ L +LE Sbjct: 179 FSSVSERLEKVHQGLGEMRA----LASDVGDLKRVL-SNVKSRGIWGEIQLGNMLEQVMS 233 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKD---VVIDAKMTLVAYERYFNAE---DD 273 + Y QV S + + V+LP + + +D+K Y R +A+ D Sbjct: 234 PDQYGVNVQVV----PGSSNRVEFAVKLPGDESPVWLPLDSKFPQEDYHRLLSAQEASDP 289 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 E A +E + R + K Y P T D+ +M++PVE + L P L Sbjct: 290 KGAEEARRELANRIVAEARSIRDK-YVCPP--HTTDFAVMYLPVEGLYAEVLKA-PGLAE 345 Query: 334 EAL-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 + + ++ P L L ++ +R I R+ +++ + D+ Sbjct: 346 RLMTEFRVVPSGPMVLAALLNSLQMGFR-------TLAIQRRSGEVWKLLGQVKGDLRRF 398 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 G+ L+KA+ + A +L R Sbjct: 399 GEMLEKARRKIQDAGDELDRAASRSRTMERRLRD 432 >UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y818_9BACT Length = 434 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 77/391 (19%), Positives = 158/391 (40%), Gaps = 33/391 (8%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 A++ +A + + Q ++E E L + +N +L A +T + A Sbjct: 24 LFAQKRGRIATEDLLMELLQQELSEQSE-EALRRSSEMRRELNETLRASSMSLTESVRAI 82 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGF 152 D+I ++ L+ + + +N+ L + + + E+L + Sbjct: 83 GDLQADRIERLEKRSGDLNAAVDKRL-ESLRTDLLGLRRENQSQLEKIRAGVEERLQETI 141 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 +++ SF ++ + + ++ +A +L R L + K +G+WGEV L Sbjct: 142 DKRLGSSFALVQRQLEAVQKGLGEMRS----LAGSVGDLKRVLT-NVKVRGSWGEVQLRA 196 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYER 266 +LE E +Y V+I D++ + + VRLP G D + ID+K L Y R Sbjct: 197 ILEQILSPE--QYAANVAIRPDSQE--RVEYAVRLPGGGDGAPPVWLPIDSKFPLEDYHR 252 Query: 267 YFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 +A D+ + +A + + + + + K Y P + D+ L+F+P+E + Sbjct: 253 LCDASSRGDEQSAAAARAALLRVLESEAKDVCEK-YIAPP--HSTDFALIFLPIEGLYAE 309 Query: 324 ALDRQPELITEALKN-NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 L R P + +++ P TL L ++ +R I R+ ++++ + Sbjct: 310 VL-RDPAAAERLQRKYRVVVAGPATLAALLSSLRMGFR-------TLAIQQRSGEVWELL 361 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 + G++LDKA+ A + Sbjct: 362 ASVRGEFGKFGEALDKARRQLNAAASSIEET 392 >UniRef50_B4S924 Putative uncharacterized protein n=2 Tax=Chlorobiaceae RepID=B4S924_PROA2 Length = 450 Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats. Identities = 76/399 (19%), Positives = 159/399 (39%), Gaps = 26/399 (6%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHA 97 R E E + ++Q+ Q+ EL+ ++ + + S + + Q+ Sbjct: 54 RREQQEEFTRSRQEQVQALGDL-RAELMASQRENRSELGNSFKTFEDSRRREVHEQQEFQ 112 Query: 98 DDKIRQMINSEQRLSEQFENLANRI---FEHSNRRVDEQNRQSLNSLLSPLREQLDG-FR 153 + ++ ++ R+ + ++I E + EQN L + + E+L Sbjct: 113 RSRFSDLVAAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKLEEMRVTVDEKLQATLE 172 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +++ +SF + ++ + + ++ +A +L + L + KT+G GE+ L + Sbjct: 173 KRLSESFRQVSERLQKVHEGLGEMKS----LATGVGDLKKVL-SNVKTRGVLGEMQLQNI 227 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERY 267 L + L +++ ++ SR + + VRLP D + IDAK L +Y R Sbjct: 228 L--ASLLSPEQFDENIATR--EGSRERVEFAVRLPGKDDDGDVVLLPIDAKFPLESYYRL 283 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGR---KDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 A + + L++ V IR + Y P RT D+ ++F+PVE F Sbjct: 284 LEAGEKGD-AALLKQASKEVETEIRRCAKEISDKYLNPP--RTTDFGILFLPVEGLFAEV 340 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 + L + NI++ PTTL L ++ +R + ++ S++ + Sbjct: 341 VRNTSLLELLQREYNIIVTGPTTLAALLNSLQMGFRTLAIQKRTSEVWKVLSQVKGEFAT 400 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 F D ++ L +A + + + N L + Sbjct: 401 FGDVLTRAQNKLTQASTEIDRLVGVRTRKIQNTLRSIDQ 439 >UniRef50_B0MP59 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP59_9FIRM Length = 435 Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats. Identities = 81/461 (17%), Positives = 176/461 (38%), Gaps = 50/461 (10%) Query: 1 MDFSIMVYAVIALVGVAIGW--LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M+ I++ V +V V I L + A+ E+ +L ++ Q Sbjct: 1 MEILIIITLVACVVSVIISVITLLTQKRLAENIGVNKITDEQTAKQLEMLAERTAQL--- 57 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRM-----EAAQQHADDKIRQMINSEQRLSE 113 + + S + L +L + T + + + ++D R + EQRL Sbjct: 58 ---SAKFDTAQANRVSGESVLRTELVNLVTNLGNTLTDTQKLNSDGTARLLSQFEQRLQS 114 Query: 114 QFENLANRIFEHSNR------RVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQE 166 + A + N ++ + L + + E+L ++ SF +++ Sbjct: 115 IEQRNAADMQNMRNEMAVQLGNINANTKNQLEEMRGMVGEKLQTTLDDKISRSFATVSEQ 174 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 + + + +Q +A +L + L + K +G GE+ L +L + + +Y+ Sbjct: 175 LNKVYSGLGEMQS----LAAGVGDLKKVL-SNVKNRGILGEMQLGAIL--ADILAPEQYD 227 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAEDDYTR---ESA 279 T+V++ D+R+ + + V+LP D + ID+K Y NA D + E A Sbjct: 228 TEVAVAPDSRNHV--EFAVKLPGKNDDTVYLPIDSKFPGDTYTALCNAYDSGDKVMIEEA 285 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN- 338 + + +++ + + K Y P T ++ +MF+P E + + L+ E +N Sbjct: 286 SKALVVAIKKCAKDIHDK-YICPP--YTTNFAVMFLPFEGLYAEVVKL--GLVEELQRNY 340 Query: 339 NIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDK 398 + + PTT+ L ++ +R + R S+++ + + L K Sbjct: 341 GVSIAGPTTMSALLNSLYMGFR-------TLAVQKRGSEVWKILSSVKKEFETFEDVLTK 393 Query: 399 AQDNYRQAMKKLSSGRGNVLAQAEA-FRGLGVEIKREINPD 438 + + +Q L + G +G + +I + Sbjct: 394 TKKHLQQVDSDLETLVGVRTRAINKQLMSVGEDSTAQIGTE 434 >UniRef50_A6GP11 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GP11_9BURK Length = 472 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 78/418 (18%), Positives = 162/418 (38%), Gaps = 36/418 (8%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTT-R 89 +A+Q EE+ +L Q I + ++E LL ++ + L++V + Sbjct: 53 QAQQRFASEELGKQLRLLNQDIEARQSKQSE--LLTQTFAQARTESQQAAHGLQQVIVGQ 110 Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRI---FEHSNRRVDEQNRQSLNSLLSPLR 146 Q +K+ Q + R + ++ +I E + + E N L + + Sbjct: 111 FTQGNQLQSEKLNQFSETLHRTNTLIQDQLTQIRLSVEQKLKDMQEDNASKLELMRKTVD 170 Query: 147 EQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 E+L ++ +SF + ++ + + +Q +A +L R L + K++G W Sbjct: 171 EKLHATLETRLGESFKQVSERLEQVYKGLGEMQT----LATGVGDLKRVLT-NVKSRGTW 225 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAKMT 260 GEV L +LE + ++ I+ S + VRLP +D + ID+K Sbjct: 226 GEVQLQALLEQ--MLTPSQFGRN--IKPVPGSHNIVEFAVRLPGKEDDQPVWLPIDSKFP 281 Query: 261 LVAYERYFNAEDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPV 317 YER D + A + ++R + + K L T D+ ++F+P Sbjct: 282 KEQYERLQECFDRADADGVAVASKALEMAIRAEAKTIAEK---YLAPPYTTDFGILFLPT 338 Query: 318 EPAFLLALDRQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E + + R P L+ + + + + + P TL L + ++ + R+S Sbjct: 339 EGLYAEVVKR-PGLVDDLQRLHRVTVAGPITLTTLLNALQLGFK-------TLALEKRSS 390 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 +++ + + G L K +D +A K + +G+ +++ Sbjct: 391 EVWTVLSAVKTEFGKFGDILAKTRDTLERAAKNIEQAETRSRVMQRKLKGVDELPEKD 448 >UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=Q2RP03_RHORT Length = 392 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 134/355 (37%), Gaps = 25/355 (7%) Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL 149 + AAQ ++ QM S+ + L + R+V + + L + E L Sbjct: 54 LAAAQVEMAGRLGQMAKSQAAAT----ALLADRLQSQERQVSRVLDERITDLTRRVGEGL 109 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 + +S T+ +N+ +++ +M +L L + + +G G+ Sbjct: 110 QRSTEKTAESMQDLRARLATIDAAQKNIAEMSEKMT----SLQDIL-SNKQARGAMGQTQ 164 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYF 268 + ++ L Y Q + N + D ++ LP + IDAK L +Y Sbjct: 165 MEDLVRD--LLPPSAYRFQAKMGNGRIA----DCLLTLPNPPGAIAIDAKYPLESYRALR 218 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 A D R A + A V H+R + + + T + LMF+P E + Sbjct: 219 AAGSDAERLQAGRAFAADVLRHVRDIAER---YIIADETAESALMFLPAEAVYAELHANY 275 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 P+++ +A + + +VSPTTL+ L T+ + + + A I L D + D Sbjct: 276 PQVVEQAFRRRVWIVSPTTLMATLNTVRAILKDARMNDMAVLIRREVRALIDDVNRLDDR 335 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL--GVEIKREINPDLAE 441 + + + + ++ RQ ++ + + + G + + P E Sbjct: 336 VGKLARHFGQTGEDLRQIQISTE----KIMRRGDRIEEVQFGQDEPESLPPPTGE 386 >UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y0_9CLOT Length = 439 Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats. Identities = 79/402 (19%), Positives = 152/402 (37%), Gaps = 41/402 (10%) Query: 44 ELSAAKQQITQSEHWRAECELLNNEVRSLQSIN--------TSLEADLREVTTRMEAAQQ 95 + ++ I+ + R E + E R + N L A + + Q+ Sbjct: 32 QRDMEQKLISVEKALREEFTVNREESRKNEQSNRTEIGSSIEKLSATILSNMIELSNLQK 91 Query: 96 -HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR---QSLNSLLSPLREQLDG 151 D R M + + + + + + N + E + ++L + + E+L Sbjct: 92 NQFDTYSRTMERTLDAFNYNLRSSIDDLTKLQNEKFVELTKSTEENLEKMRVTVDEKLQS 151 Query: 152 -FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 R++ +SF ++ + + +Q +A +L + L + KT+G GEV L Sbjct: 152 TLERRLSESFKVVSERLEQVHKGLGEMQS----LAAGVGDLKKVL-SNTKTRGVLGEVQL 206 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAY 264 R+LE E YE ++ SR + ++LP + +DAK L Y Sbjct: 207 ERILEQFLSPEQYE----KNVITKKGSRETVEFAIKLPGKDYDNKTVYLPLDAKFPLEVY 262 Query: 265 ERYFNAEDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 + +A D + A + ++ + + K Y P T D+ LMF+P E + Sbjct: 263 NKLLDAYDLQNQAQIDAASKNLERFIKKSAKDIRDK-YIDPP--NTTDFGLMFLPTEGIY 319 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 L Q + + NI + PTTL+ L ++ +R + I +S+++ Sbjct: 320 AEVLKNQSLVEFVQREYNINITGPTTLVALLNSLQMGFR-------SLAIEKHSSEVWKI 372 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 + + S L+ AQ+ QA ++ G Q Sbjct: 373 LGAVKTEFSKFETVLNSAQNKLNQASSEIDKLVGTRTRQINR 414 >UniRef50_C8W9S7 Putative uncharacterized protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W9S7_ATOPD Length = 449 Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats. Identities = 69/456 (15%), Positives = 169/456 (37%), Gaps = 27/456 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELS---AAKQQITQSEHWR 59 F +++ ++ L Q+ +E L +++ +S A Q+ ++ + Sbjct: 9 FILLIVGLVTLSSKLSQVKTLQEQNQTSSSELLRNSQDLDRRISDNMTAMHQLMDTKLDQ 68 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + +LQ+ + + ++ R +A Q+ D+ ++ + S + Sbjct: 69 VREVVDQKLTTTLQAQTKQTDQRIAQLDARFDAFQRRVDENMKTTSQT----STEQLGKV 124 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + ++N L + + E+L ++ SF + + + + + ++ Sbjct: 125 RETVDKQLSDMRKENEAKLELMRQTVDEKLQKTLDERMTQSFQRVSTQLEQVHQGLGEMR 184 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 +A+ +L + L G KT+G GE+ L +L E YE ++ + S Sbjct: 185 ----GLAEGVGDLKKVLSG-VKTRGIVGEIQLGAILRDILSPEQYE----ENVATVSGSS 235 Query: 239 MQPDVIVRLPQGKD----VVIDAKMTLVAYE---RYFNAEDDYTRESALQEHIASVRNHI 291 + + V+LP + ID+K YE N ++ +A + A ++ Sbjct: 236 ERVEFAVKLPGESGESVWLPIDSKFPGDTYEHLVDAINTGNEEAIIAAKKSLEARIKAEA 295 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + + K Y P T ++ ++F+P E + + + L + + + P+T+ Sbjct: 296 KDISTK-YIAPP--ETTNFAILFLPFEGLYAEVVSQVGLLEQLQREYRVNVCGPSTMAAL 352 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L ++ ++ ++A +I S + + + + + KA+ + + Sbjct: 353 LNSLQMGFQSVAIQKHADEIQRVLSAVKTEFETYKGQLEKARSQVQKAEKALDTILTTRT 412 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + L A LG K D+ + + Sbjct: 413 NVMSRKLRTVTALENLGEAQKTLGISDMVDDGDEDE 448 >UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=Rickettsia RepID=RMUC_RICBR Length = 428 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 76/393 (19%), Positives = 160/393 (40%), Gaps = 26/393 (6%) Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 + E + L ++ + + N L + ++E + + + + + +SE+ +E F + Sbjct: 29 LKTELQFLTDQNLEITNNNQLLNQEKIAYLQKIEQLKCRVEYQEQSIKDSEKIRNESFSS 88 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 +F+ + + +Q + ++ + + +L + + + GK E L + L Sbjct: 89 AKAALFDL-GKDLSKQLIE-IHKMENTAARELA--EKNIATASGKFNSEFERLITMVGTL 144 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + Q + ++L G E+ L +L++SGLR ++ Q + + Sbjct: 145 NKDIEQSKSTVDLIKQSLLSPIGA-GLLAEITLENILKSSGLRSNLDFIMQYGLTTSDST 203 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +++PD ++ LP G +VID+K + + +D+ ++ H++ L K Sbjct: 204 KLRPDALIFLPSGNLMVIDSKASKF----LVDEQDNSG------NLSKTMNYHLKSLANK 253 Query: 298 DYQQ--LPGLRTLDY------VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 DY + L L + LMF+P E A + P + +A +I V P+ L+ Sbjct: 254 DYAENILADLNKKEQNYNNVITLMFLPTEQAVEKVIAADPNFLQKAWGCSIFPVGPSGLM 313 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 L +S N + I + KL + D IG +L NY K Sbjct: 314 NMLSFAKFQITDHRRSENYKIIIEEVRKLLSSIGTIADYSQKIGNNLHNMVTNYD---KF 370 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 +S N +++ + + LG++ + P E+ Sbjct: 371 AASFNRNFMSRVKNIQKLGIDSGNKTLPASLER 403 >UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC51_9FIRM Length = 273 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 58/296 (19%), Positives = 120/296 (40%), Gaps = 28/296 (9%) Query: 130 VDEQNRQSLNSLLSPL--REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + ++++S++S L ++ + +QVQD +A + +L L ++N M Sbjct: 1 MQNKSKESVSSNSDSLILQKNFEYLLKQVQDVQKNQATSKMSLNQMEDYLYRMNQVMT-- 58 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 + K +GNWGE L +L + Y Q ++ N + D L Sbjct: 59 ----------NTKLRGNWGEYQLDMLLSVYCGQNPSIYSMQYTLPNGKIA----DCAFHL 104 Query: 248 PQ-GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 P K + ID+K + Y ++ L+ +++ HI + K + Sbjct: 105 PDTNKVLCIDSKFPMENYLNLQE-----DMDTYLRPFKMNMKKHIDDVANK----YINMD 155 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 T+ Y L+F+P E + + +L T AL+ ++MLVSPTTL+ + T+ + + +++ Sbjct: 156 TMPYALLFVPSEAIYQFVCAKCDDLFTYALQKHVMLVSPTTLVAEVMTLLSSTKDFYRTS 215 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + ++I L + ++ ++L+ + + E Sbjct: 216 HMEEIERNILLLQEDANRLVERSVKAEKTLETLATQFHAVSISAQKLSSRMTKMGE 271 >UniRef50_B0P9L0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9L0_9FIRM Length = 439 Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats. Identities = 80/397 (20%), Positives = 151/397 (38%), Gaps = 35/397 (8%) Query: 37 EREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS-LEADLREVTTRMEAAQQ 95 +R+ A + + S E L + + Q + L + + + Sbjct: 47 DRQRTALSEEARQTRQESSRAAMEAVESLGRTLAAGQQQQSRELSIRQDSLQKTVAELTR 106 Query: 96 HADDKIRQ-MINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FR 153 D + Q M +EQ+LS + NR+ + E N L + + E+L+ Sbjct: 107 GIDGRFAQFMAQNEQQLSGIRSTVENRL-----SAMQEDNAAKLEQMRKTVDERLEKTLE 161 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 ++ SF ++ + + +Q +A +L + L + KT+G GEV L + Sbjct: 162 TRLGQSFKMVSERLEQVYKGLGEMQT----LAAGVGDLKKVL-SNVKTRGLLGEVQLGAI 216 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFN 269 LE + +YET V+ D+R+ + + V LP + + IDAK AY + Sbjct: 217 LED--ILAPGQYETNVATRRDSRNPV--EFAVVLPGDGETPVYLPIDAKFPADAYIQLTQ 272 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRK---DYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 A D RE A+ E ++ ++ R Y P T D+ +MF+P E + L Sbjct: 273 AYDLGDRE-AIDEAARLLKTRVKAFARDIRDKYIDPP--HTTDFAVMFLPFEGLYAQVLQ 329 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 + +++ PTT+ L ++ ++ I R+++++ + Sbjct: 330 LD-LVEQLQRDYKVVVAGPTTMAALLNSLQMGFK-------TLAIQKRSAEVWQVLGAVK 381 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 + + G L+ Q QA +L G Sbjct: 382 TEFNRFGDVLETTQQRLEQAGSELDKLVGVRTRAIRR 418 >UniRef50_A6SXN7 Uncharacterized conserved protein n=8 Tax=Bacteria RepID=A6SXN7_JANMA Length = 493 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 79/402 (19%), Positives = 157/402 (39%), Gaps = 29/402 (7%) Query: 46 SAAKQQITQSEHWRAECELLNN-EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM 104 S A Q Q + + + LN + L+++ ++ A + A +H D + Q Sbjct: 94 SVATLQNNQIDSFAQQLAKLNEANAQQLEAMRLAIGAQAQAGREEQATALKHFGDTLNQT 153 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKE 163 + + + Q E + + N L + + E+L +++ +SF Sbjct: 154 LTTLTESNAQRMAEVRATLEAKIKDLQTDNGTRLEEMRKTVDEKLHATLEQRLGESFKLV 213 Query: 164 AQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGY 223 + + + +Q Q+A +L R L + KT+G WGEV L +LE + Sbjct: 214 SDRLEKVHQGLGEMQ----QLAIGVGDLKRVLT-NVKTRGTWGEVQLEMLLEQVLTPD-- 266 Query: 224 EYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYTRE 277 +Y V + + ++LP D + IDAK YER A D + Sbjct: 267 QYAKNVETVPGTGE--RVEFAIKLPGTDDGQTPIWMPIDAKFPKEQYERLAEAADRADAD 324 Query: 278 ---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 A +E VR + + K L T D+ ++F+P E + + R P L + Sbjct: 325 GVSLAGRELERVVRFEAKKIAEK---YLSPPLTTDFAILFLPTEGLYAEVMRR-PGLADD 380 Query: 335 ALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 + + + + P+TL L ++ +R + + ++ + + F D ++A Sbjct: 381 LQRTHRVSIAGPSTLSALLNSLQMGFRTLALEKRSSEVWQVLGAVKTEFGKFGDVLAATK 440 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 +L++A N QA + + + ++ L E +++ Sbjct: 441 ATLERAAKNIEQA----ETRSRQMTRKLKSVEALPSETAQQL 478 >UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDX5_9PROT Length = 356 Score = 170 bits (432), Expect = 7e-41, Method: Composition-based stats. Identities = 71/342 (20%), Positives = 136/342 (39%), Gaps = 19/342 (5%) Query: 92 AAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 ++ +D +RL+ Q + +F+ N+ +++ L L L E L Sbjct: 28 QNRRISDANSALSELLSERLTAQSARASAELFKL-NQSLNDGFNDKLYYLNRSLGEGLQR 86 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNA---QMAQEAINLTRALKGDNKTQGNWGEV 208 + ++ + + + + + N Q+ E L L G+ K +GN+GE Sbjct: 87 QNSALSENLSSLDRGFKDIAENLARMSEQNKTSLQVRDEIARLNSIL-GNVKLRGNFGEY 145 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 L R+L + YE Q + N + D + + + K + ID+K L +YE+ Sbjct: 146 RLERILSMIYGQNAAFYELQKHLPNGRIA----DCALHIAKEKILCIDSKFPLQSYEKII 201 Query: 269 NA---EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 D SA ++ A ++ H + K + + ++ ++F+P E F+ Sbjct: 202 ATSASNDAAALASADKQLAADMKKHAADIAEK---YIIPPLSTEFAVLFVPSEAVFVYVC 258 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 +R P+++ + I SPTTLL L TI + E ++N + + D L Sbjct: 259 ERLPQVLEYCAQIGIFAASPTTLLALLGTIRTFIKDEVLAQNIKSVKDEIYALKSDF--- 315 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 D + +L D + L+ ++ A+ E F L Sbjct: 316 -DAHAKYATALQTYADKLAAQAELLNKNAKSLKARFERFSEL 356 >UniRef50_B0VIW8 DNA recombination protein rmuC homolog n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIW8_9BACT Length = 459 Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats. Identities = 81/406 (19%), Positives = 171/406 (42%), Gaps = 32/406 (7%) Query: 36 AEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQ 95 AE + +++ A+ ++ ++ + EL N+ Q IN + E + + Sbjct: 65 AENRKELSDSIKAQNEVLIAQTTASREELNNSFNTLKQQINNDSAVNREEQKKALNDLSE 124 Query: 96 HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRR 154 + ++ +IN +Q Q + + E ++ + N L + + E+L D + Sbjct: 125 NFTRRMTDLINIQQ----QEAETSRKTLETKMEQIRQNNETKLEQMRQTVDEKLHDTLEK 180 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 ++ +SF K+ ER L H +++ ++ + +A +L +AL + K QG GE+ L +L Sbjct: 181 RLGESF-KQVSERLELVH--KSMGEMQS-LANGVGDLKKALT-NVKRQGVLGEIQLANLL 235 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYF 268 E E YE + + + + +RLP + + IDAK + Y+ Sbjct: 236 EDILTPEQYE----KNFRPNKNRDEKVEFAIRLPGSSEKEEFVYLPIDAKFPIADYQNIM 291 Query: 269 NA---EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 NA D E+A + + ++N + + K Y P T D+ ++F+P E + L Sbjct: 292 NAYDMGDLAEVENARKSMVQRIKNCAKDIRDK-YINPP--VTTDFGMLFLPFEGLYAEVL 348 Query: 326 DRQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 R P L ++ ++++ PTT + ++ +R + ++ + + + Sbjct: 349 -RSPGLFETIMRDYHVIICGPTTTAAVINSLQVGFRTLAIQKKTSEVWKILASIKLEFGK 407 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 F + + L +A +N +A S + + + + L VE Sbjct: 408 FGTILEQTQKKLQEASNNIEKA----SYRSRQIEKRLDKVQELPVE 449 >UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostridia RepID=A4XHH9_CALS8 Length = 430 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 75/397 (18%), Positives = 166/397 (41%), Gaps = 27/397 (6%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 + + + + + ++ + + ++ E ++ +Q+ +S + L + + Sbjct: 24 KNSSFQTRAEEKFESIEKMLDKLQNLT--LEQISQNRSEVQNTISSFGSLLMSRFSDFSS 81 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG- 151 Q+ D I + S++ + + ++ EQN + L + + L Sbjct: 82 FQKSQFDSFSNQILNLTTTSQEKLEAIRKEVDSKLSQIQEQNERKLEQIRQTVDSHLQQT 141 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLT 211 ++ +SF K ER L H R L ++ A +A +L R L + K +G GE+ L Sbjct: 142 LEAKLGESF-KLVSERLELVH--RGLGEMQA-LANGVGDLKRIL-SNVKVRGTLGEIQLG 196 Query: 212 RVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-------VVIDAKMTLVAY 264 +++ + + +YE V I+ + Q + +++P + ID+K + +Y Sbjct: 197 NIIDQ--ILDTSQYERNVRIKPHTQE--QVEFAIKIPSKNSNENEFIYLPIDSKFPIESY 252 Query: 265 ERYFNAEDD---YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 ER +A++ +E S++ + + + K Y P RT D+ +MF+P E + Sbjct: 253 ERLLDAQEKNNIDEISKFSKELENSIKQNAKTIKEK-YIDPP--RTTDFAIMFLPTEGLY 309 Query: 322 LLALDRQPELITE-ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 L R P L + +++ PTT+ L ++A ++ + ++ + S + Sbjct: 310 AEVL-RIPGLFEYVQREYKVIIAGPTTISAILNSLALGFKTIAIEKRTSEVWELLSAVKT 368 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 + F + + + + L +AQD A KK + + Sbjct: 369 EFSKFGEVLEKVKKKLLEAQDTIDTAAKKTRTIERKL 405 >UniRef50_B3CQE7 DNA recombination protein RmuC homolog n=2 Tax=Orientia tsutsugamushi RepID=B3CQE7_ORITI Length = 449 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 71/386 (18%), Positives = 156/386 (40%), Gaps = 25/386 (6%) Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 L +++ L+ + +++E+ TR+E + K + + Q + Sbjct: 41 IEENYTKLLEQLKQLEHDRLNYVQEIQELKTRIEFIKLDNSKKEKMNEEALQLAKASLLD 100 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 L N + ++++ ++Q + + Q F K + L + + Sbjct: 101 LGNDL----SKQLIALHKQETEQSRKLSENNIHNTNLKFQQEFQKLLEIIAVLNNRVDES 156 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 ++ + +L + G E+ L +L+ASGLR Y++ Q ++ ++ Sbjct: 157 TKIVEVIKS-------SLLSPSGV-GMLAEITLENILKASGLRVKYDFIMQCNLTDENNM 208 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 R++PD ++ LP ++IDAK + + N + + +++ S+ H++ L K Sbjct: 209 RLRPDALIFLPGDNLMIIDAKASKFLIDMCNNNNNAAIHTAKVEKLRKSINLHLKNLSSK 268 Query: 298 DYQQLPGLRTLDY---------VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 +Y Q + + + LMF+P E A E I ++ + NI V P+ L Sbjct: 269 EYAQAI-VDSCQFEARNFNNIITLMFLPTETAIENLSTIDREFIHKSWELNIFPVGPSGL 327 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + L + + + N + I + K+ + L + + ++ +Y Q Sbjct: 328 MNMLSFAKFQIKEQMRYENQKLILNEVEKVILSINLLTEYAHKLSSNVQGIVSSYDQFA- 386 Query: 409 KLSSGRGNVLAQAEAFRGLGVEIKRE 434 +S N L++A+ + LG+E K+ Sbjct: 387 --ASFNRNFLSKAKTIQQLGIETKKS 410 >UniRef50_A3HRV1 Putative DNA recombination-related protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HRV1_9SPHI Length = 414 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 68/389 (17%), Positives = 152/389 (39%), Gaps = 24/389 (6%) Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE 108 + + ++E + E+ ++ + N +L R V A+ + + +++ Sbjct: 30 EIDLLKNELKQLSEEMEKALAQARRESNENLITQFRLVFDNQRASSRDQSEALKRFGEVF 89 Query: 109 QRLSEQFENLANRIFEHSNRR---VDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEA 164 + ++F +L FE NRR + + L + + E+L ++ SF + Sbjct: 90 SKNVQEFNSLQKEKFEDLNRRQEDLMKTTELRLEKIRETVDEKLQKTLESRLGQSFEMVS 149 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + + + +Q +A +L R L + K++G GE L +LE + + Sbjct: 150 NQLQAVQKGLGEMQS----LANGVGDLKRVL-SNVKSRGVLGEYQLQAILENVLTPD--Q 202 Query: 225 YETQVSIENDARSRMQPDVIVRLPQGKD---VVIDAKMTLVAYERYFNAEDDYTR---ES 278 Y +I R + + V++P + + ID+K +Y R +A + + E Sbjct: 203 YILNAAI--GKSGRERVEFAVKMPGNEHQVLLPIDSKFPQESYLRLVDAYEQVNKREIEI 260 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALK 337 A + I +V+ + K Q + D+ ++F+PVE + L R+P L + Sbjct: 261 ARMDLIKAVKKSAADIRDKYIQVPY---STDFAILFLPVESLYAEIL-REPGLSQQIQQE 316 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 +++ PTTL L ++ +R + + ++ + + F D + + L Sbjct: 317 YKVLVTGPTTLAAILNSLQMGFRTLAIQKRSSEVWQILGAVKSEFGKFEDLIVKTQKKLG 376 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 +A + + + L + + Sbjct: 377 EANSELDKLVGARTRAIQRKLKEVQELPE 405 >UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteurianus RepID=C7JFP3_ACEP3 Length = 422 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 82/412 (19%), Positives = 154/412 (37%), Gaps = 45/412 (10%) Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E E N+ +E + R + R+E + +++ + R + Sbjct: 45 EREAATARSDIAAQRNSMVEME-RAMGGRIERMRTELAEQLGALAGGLGREQAEARAAQA 103 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 R + + + Q L S+ + EQL +Q+Q SF + ++ + + ++ Sbjct: 104 EAL----RNLADTSAQQLASIRRAVTEQLHEAVEQQMQTSFQRVLEQFSAMQKAMGEVRA 159 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + Q+ + L + KT+G WGE L +L+ L G YE+ V I N Sbjct: 160 MTGQIGD-----LKRLFSNVKTRGGWGEAQLRAILDDV-LPPGT-YESNVRIGNGNDV-- 210 Query: 240 QPDVIVRLP----QGKDVVIDAKMTLVAYERYFNAEDDYT---RESALQEHIASVRNHIR 292 + +R+P + +D+K AYER NA D+ ++A + ++R R Sbjct: 211 -VEFAIRMPVKSSTPPLLPVDSKFPTEAYERLLNAADEGDTAGEKAARKSLENTMRLEAR 269 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVA 351 + K Y P +T+++ ++++P + + R P LI + + +M++ P + Sbjct: 270 KISSK-YIHPP--KTVEFAVLYLPTDGLYTEV-ARMPGLIDDLGRQFRVMVMGPALMPAM 325 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LRTI + + IA + +M + LDK N + + Sbjct: 326 LRTIHLGYVTLALEERTETIARL-------LGATRQEMIKMDGVLDKLARNAQAMSFSIE 378 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 R + + R L D E S EE + N A Sbjct: 379 EARRRTRSVSRKLREL----------DEPEDNASGTEESEIEFTGVDSNGTA 420 >UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamonadaceae RepID=A1WJL3_VEREI Length = 621 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 76/410 (18%), Positives = 157/410 (38%), Gaps = 34/410 (8%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + Q E A E+ + E A T+ + ++ ++ LEA+ + Sbjct: 209 ESRQAMGESAALFEQRIQERFEALTAGTRQTLDSLKGDVQAQLGSMANALKNQLEANGLQ 268 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 +T + Q ++ ++ +EQ N N + N L ++ + Sbjct: 269 ITNQFSVLQDAVSQQLAGLVQGSGHNAEQLRNTLNERL----AAIQADNASKLEAMRRTV 324 Query: 146 REQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 E+L +++ +SF ++ + + +Q +A +L R + + K++G Sbjct: 325 DEKLHATLEQRLGESFKLVSERLEQVHKGLGEMQT----LAGSVGDLKRVMT-NVKSRGT 379 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAKM 259 WGE+ L ++E E ++ V + + + +RLP D + IDAK Sbjct: 380 WGEMQLGAIIENVLTPE--QFARNVKTVPGSDELV--EFAIRLPGKSDEHPVWLPIDAKY 435 Query: 260 TLVAYERYFNAEDDYTRESAL---QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 + Y+R +A+D + + SVR R + K Y P T D+ ++++P Sbjct: 436 PVEQYQRLLDAQDAADKAAIASAGNAFETSVRLEARKIFAK-YVSPP--HTTDFAVLYLP 492 Query: 317 VEPAFLLALDRQPELITEAL-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 E F + R P L+ + +M+ P L L ++ +R I R+ Sbjct: 493 TESLFAEVMRR-PGLVEAVQNECRVMITGPANLAAMLNSLQMGFR-------TLAIEKRS 544 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 S+++ + + + G++++ + + A KK A R Sbjct: 545 SEVWSLLGSVKTEFAKFGEAVEATKKSIDTAAKKFDEVGVRTRAIQRRLR 594 >UniRef50_B2IM63 Competence-induced protein Ccs50 n=69 Tax=Streptococcus RepID=B2IM63_STRPS Length = 432 Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 73/412 (17%), Positives = 166/412 (40%), Gaps = 41/412 (9%) Query: 21 LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE 80 LF +Q ++ + L++ + + Q+ + L+ + + +++ L+ Sbjct: 30 LFLIWQRQDRQEKHLSK--SLEDQADHLSDQLDYRFDQARQASQLDQKDLEV-AVSDRLQ 86 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 E+ + +Q D + Q + +H + + E N Q L Sbjct: 87 EVRIELHQGLTQVRQEMTDNLLQTRDKT---------------DHRLQALQESNEQRLEQ 131 Query: 141 LLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 + + E+L+ + ++Q SF +++ ++ + +Q +A++ L + L G Sbjct: 132 MRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGLGEMQT----VARDVGALNKVLSG-T 186 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VV 254 KT+G GE+ L +++E +YE + + S + + ++LP D + Sbjct: 187 KTRGILGELQLGQIIEDIMTPA--QYEREYATV--ENSSERVEYAIKLPGQGDQEYVYLP 242 Query: 255 IDAKMTLVAY---ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 ID+K L Y E + D E + +ASV+ + + K Y P RT ++ Sbjct: 243 IDSKFPLADYYRLEEAYETGDKDEIERCRKSLLASVKRFAKDIKSK-YIAPP--RTTNFG 299 Query: 312 LMFIPVEPAFLLALDRQPELITEA-LKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 ++F+P E + + R P + + I++ P+TL L +++ ++ + ++A Sbjct: 300 ILFVPTEGLYSEIV-RNPVFFDDLRREEQIIVAGPSTLSALLNSLSVGFKTLNIQKSADH 358 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 I+ + + + F + + L A N + + + + L E Sbjct: 359 ISKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIE 410 >UniRef50_D1PNL6 RmuC domain protein n=2 Tax=Ruminococcaceae RepID=D1PNL6_9FIRM Length = 468 Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats. Identities = 81/433 (18%), Positives = 163/433 (37%), Gaps = 45/433 (10%) Query: 37 EREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 E + + +L A + + ++ A + + Q N S E R AA+Q Sbjct: 64 ETDLLAEQLRAMQGETARTTT--ASLRDFSAVLAENQRQNASASTARLESIDRAGAARQK 121 Query: 97 ADDK--IRQMINSEQRLSEQFENLANRI------FEHSNRRVDEQNRQSLNSLLSPLREQ 148 A + Q+ E RL ++ A R+ + N + L+ + + E+ Sbjct: 122 AASDALLAQLTMLENRLKNLEDSNATRLDGVRGALVQGLNVIRADNNKKLDEIRGTVEEK 181 Query: 149 L-DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 L D ++++ DSF + + + + +Q +A + +L + L G KT+G GE Sbjct: 182 LQDTLQKRINDSFRTVSAQLEQVYKGLGEMQ----NLAADVGSLKQVLSG-VKTRGILGE 236 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD---VVIDAKMTLVAY 264 V L +LE + +YET V+ + + + + V+LP + IDAK Y Sbjct: 237 VQLGAILEQ--ILAPGQYETNVATVPGSNN--RVEFAVKLPGQSGTVWLPIDAKFPGDTY 292 Query: 265 ERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 A+ D + + + +R + + K Y ++P T + ++F+P E + Sbjct: 293 AHLQAAQQRGDAAATAAMRKALYSVLRQEAKDIHDK-YIEVP--YTTSFGILFLPFEGLY 349 Query: 322 LLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 + + I + P+T+ L + +R I R+ +++ Sbjct: 350 AEVVS--SGVTETLQRDYQITVAGPSTMAALLNALQMGFR-------TLAIQKRSGEVWT 400 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG-NVLAQAEAFRGLGVEIKREINPDL 439 + + G L + Q + Q L G A + ++++PD Sbjct: 401 VLGAVKTEFEKFGAGLQQMQRHLNQTGSDLEELIGPRSRAITRKLEAV-----QQLDPDT 455 Query: 440 AEQAVSQDEEYRL 452 A + E+ + Sbjct: 456 AAGLLGIQEDPKP 468 >UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8IQM2_AZOC5 Length = 388 Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats. Identities = 55/351 (15%), Positives = 130/351 (37%), Gaps = 20/351 (5%) Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 L + A + +R + + + + + +A + + + Sbjct: 39 RLAGARGQEGDESAARSDLLEAGLRDLARHQSETAGRVQAMA-EVLAQRQSDMARAVSER 97 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+S L E + R +S A+ + ++L L++Q ++L L Sbjct: 98 LDSTSYRLGESFNTAARATHESLTTLAERLAMVERAEKSLSDLSSQ----VMSLRETL-A 152 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVID 256 + + +G +G+ + ++ GL + Q ++ N +PD ++ LP + +V+D Sbjct: 153 NKQARGAFGQARMEAIVSD-GLPRDS-FAFQYTLSNG----RRPDCVIFLPGDPRPLVVD 206 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK L A + A+ R++A + H+ + + L T D ++F+P Sbjct: 207 AKFPLEAVTAFREAQSAEARKAAGNRLAQDMMKHVNDVAER---YLLPGETQDVAIIFVP 263 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E + +I A + ++LVSP+ L++A++ + + + A I Sbjct: 264 SESVHAELHEHFDAVIQRAYRARVILVSPSLLMLAIQVVQAIAKDARMREQADAIRREVG 323 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 L + + + + + + D+ + + + + L Sbjct: 324 LLVEDVARLRERVGDLSKHFALVGDDVSRVLVSAD----KIARRGLRLEQL 370 >UniRef50_A8SFR6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFR6_9FIRM Length = 447 Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats. Identities = 79/436 (18%), Positives = 171/436 (39%), Gaps = 37/436 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+F +Y ++ + + L + +E + + A+ ++ + + + Sbjct: 3 MEFLAGLYTLLLVAICLLQALLLHRTGKPAAQQDDEALKEWLRQQLEAQARVLEEKQAQQ 62 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR-LSEQFENLA 119 + L ++ T+++ +T QQ + +++ + S R L E + LA Sbjct: 63 AQQNLAAMAHISDTLQTAVQGMSSTLTAGQNTQQQTMEQRLQGLEASNARKLEEMRKALA 122 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + + QN Q L+ + + EQL D +++V +SF + + + +Q Sbjct: 123 DGL-----AAMQAQNAQKLDEIRHTVDEQLQDALQKRVTESFKAVNDQLEQVYKGLGEMQ 177 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 +A + L + L G KT+G GE+ L +LE E Y+ ++ S Sbjct: 178 S----LAADVGGLKQVLSG-VKTRGILGEIQLGAILEEILAPEQYD----TNVATIPGST 228 Query: 239 MQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHI 291 + + +R+P + ID+K Y +A+ D E+A +R+ Sbjct: 229 QRVEYAIRMPGVDGNSVWLPIDSKFPGDTYAHLQDAQASGDAQAVENARHALELVLRSEA 288 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLV 350 + + K Y + P T + ++F+P E + ++ L+ + + P+T+ Sbjct: 289 KDIREK-YVEPP--YTTAFGILFLPFEGLYAEVVNA--GLLEVLQRDYQVNVAGPSTMAA 343 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L ++ ++ I R+ +++ + + GQ L K Q RQ ++L Sbjct: 344 LLNSLQMGFK-------TLAIQKRSGEVWQLLGAVKTEFDKFGQGLSKMQQRLRQTDEEL 396 Query: 411 SSGRG-NVLAQAEAFR 425 + G A + R Sbjct: 397 DNLIGVRSRAISRKLR 412 >UniRef50_C7H3S0 RmuC domain protein n=2 Tax=Firmicutes RepID=C7H3S0_9FIRM Length = 443 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 78/437 (17%), Positives = 171/437 (39%), Gaps = 37/437 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREE-MVAELSAAKQQITQSEHWR 59 M+F +Y ++ + + + + + E + M +L A + + Sbjct: 1 MEFLAGLYTLLLVTICLLLAVVLWKLNKPRNGGDYEELKRWMQQQLDAQAKDFAARQAAM 60 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 AE +++S++ +L+ ++ ++T + Q + Q + S + + Q Sbjct: 61 AE-----QNYTAIRSVSETLQTSVQSMSTTLAQGQSGQQQILTQRLQSLEAANTQKLEEL 115 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 R + + +N + L+ + + EQL D +++V +SF + + + +Q Sbjct: 116 RRTLAENMTALQAENAKKLDEIRHTVDEQLQDALQKRVTESFKAVNDQLEQVYKGLGEMQ 175 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 +A + L + L G KT+G GE+ L +LE E YE ++ S Sbjct: 176 ----NLAADVGGLKQVLSG-VKTRGILGEIQLGAILEEILAPEQYE----TNVATIPGST 226 Query: 239 MQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHI 291 + + +++P D + ID+K Y +A+ D E+A +R+ Sbjct: 227 QRVEYAIKMPGADDGTVWLPIDSKFPGDTYAHLQDAQASGDAQAVENARHALELVLRSEA 286 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLV 350 + + K Y + P T + ++F+P E + ++ L+ + + P+T+ Sbjct: 287 KDIREK-YVEPPYTTT--FGILFLPFEGLYAEVVNA--GLLEVLQRDYQVNIAGPSTMAA 341 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L ++ ++ I R+ +++ + + GQ L K Q RQ ++L Sbjct: 342 LLNSLQMGFK-------TLAIQKRSGEVWQLLGAVKTEFDKFGQGLSKMQQRLRQTDEEL 394 Query: 411 SSGRG-NVLAQAEAFRG 426 + G A + R Sbjct: 395 DNLIGVRSRAISRKLRS 411 >UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14LU5_SPICI Length = 387 Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats. Identities = 69/352 (19%), Positives = 138/352 (39%), Gaps = 32/352 (9%) Query: 90 MEAAQQHADDKI-RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 ++ Q + + + +Q + + +LSEQ L I E V +N N L+ L E Sbjct: 40 LQKDIQASKELLEKQGLGLQNQLSEQKRELLTLISEFQTNSV--KNDAEFNRNLAILNEG 97 Query: 149 LDGFRRQVQDSFGK-----------EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+ F+ + ++ + ++ L++ + +E + L Sbjct: 98 LNNFKNNLSKQDTDLKNNLNHQGEIISKSFTDVLSNLKVLKESTTTL-KEVETKVKTLND 156 Query: 198 ---DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK-DV 253 +NK +GN GE +L +VL +E Q + D +V+ K ++ Sbjct: 157 IFLNNKKRGNLGEYLLEKVLSDMYGERHQGWERQYKLPTGT----VVDALVKTGGAKENI 212 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 IDAK L Y +Y D + L +++ I + + Y L + +M Sbjct: 213 AIDAKFPLSNYNKYLEVSDTTIKNKYLNLFKQDLKDRINEVAK--YINLENEISS--AIM 268 Query: 314 FIPVEPAFLLALDRQP-ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 F+P E F + P ++IT A K + + SPTTL L + R ++N + I Sbjct: 269 FVPSEDLFAFIYGQFPDDIITFAFKKRVWVTSPTTLSAILFVLEKHMREVAFNQNIEAIK 328 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 K+ + +++ ++ K + ++++L++ + Q + Sbjct: 329 TNLLKIKGEFERWVERWQEFTKNFVK----FNTSIEQLNTTHNKIQIQYQKI 376 >UniRef50_B6YRP9 DNA recombination protein rmuC homolog n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRP9_AZOPC Length = 446 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 74/381 (19%), Positives = 150/381 (39%), Gaps = 29/381 (7%) Query: 37 EREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQH 96 REE+ + L ++++++ + E+LN E +S+Q + RE + + + Sbjct: 47 SREELSSSLKMNREELSK--NISNFSEILNREFKSIQDSVSMANKYGRE---ELTKSLKD 101 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL-DGFRRQ 155 ++K I+S + + E + + N L + + E+L D + Sbjct: 102 FEEKFSARIDSLAKDTNIVFEKNRETIEKKLTEIQKNNSAKLEEMRKTVDEKLHDTLEER 161 Query: 156 VQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLE 215 +SF + L I ++ +A +L + L + KT+G GE L +LE Sbjct: 162 FTESFKSVSNTLDKLQRGIGEMR----NVASNVGDLRKVL-SNVKTKGVLGEYQLAAILE 216 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYF- 268 L +Y V ++ ++ + + +++P K+ + IDAK YE Sbjct: 217 Q--LLPPSQYAKNVKTKSGSKENV--EFAIKIPSKKETHEFIWLPIDAKFPTADYESLMS 272 Query: 269 --NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 D E + ++ ++ + + K Y P T ++ +MF+P E + L Sbjct: 273 SYETADLQMIERSKKDLETKIKKFAKDIHEK-YIDPP--NTTEFAIMFLPFEGLYAEVL- 328 Query: 327 RQPELITEAL-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 R P L + I + PTT+ L ++ +R + +I D + + F Sbjct: 329 RIPNLFQSIHVEFKITIAGPTTISAFLNSLQMGFRSLAVEKRTSEIWDLLGAVKTQFSKF 388 Query: 386 IDDMSAIGQSLDKAQDNYRQA 406 + + A + LD A + + Sbjct: 389 AEVVEAAKKKLDSASEELAKT 409 >UniRef50_B2T5V8 Putative uncharacterized protein n=7 Tax=Burkholderiales RepID=B2T5V8_BURPP Length = 482 Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats. Identities = 83/451 (18%), Positives = 166/451 (36%), Gaps = 48/451 (10%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA------------ECELLNNEVRSLQS 74 HA ++ E+ + + +Q + H++ + ++ + L + Sbjct: 52 HAYERLERQLRNDIAETARVSRTEQSSGFAHFQQTLAAQFSSMTTVQAGKIDGFAQQLDA 111 Query: 75 INTSLEADLREVTTRMEAAQQHADDKIR-QMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 + SL+A ++ + + D + Q+ + +F + I E + ++ Sbjct: 112 VRHSLQAQAQQARDEQGRSLKQFGDTLSLQLGQLTEANDRRFAEVRATI-EQRLKDIEAN 170 Query: 134 NRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 N L+ + + E+L +++ +SF + + + +Q +A +L Sbjct: 171 NSLKLDEMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQT----LAAGVGDLK 226 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 + L + KT+G WGEV L +LE + Y +I RS + + ++LP + Sbjct: 227 KVLT-NVKTRGTWGEVQLEVLLEQLLTADQYA----KNIATVPRSAERVEFAIKLPGRAE 281 Query: 253 ---------VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQ 300 + IDAK YER A+ D E A + A +R R + K Y Sbjct: 282 QGASATPVWLPIDAKFPREDYERLIEAQERADPVAVEEASRALEARIRAEARTIAEK-YV 340 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK-NNIMLVSPTTLLVALRTIANLW 359 P T D+ L+F+P E + L R P L + + + PTTL L ++ + Sbjct: 341 SPP--HTTDFALLFLPTEGLYAEVLRR-PGLTDLLQRDYRVTIAGPTTLTALLNSLQMGF 397 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R I R+S+++ + + G L K + + + + Sbjct: 398 R-------TLAIEKRSSEVWQVLGAVKTEFGKFGDVLAKTKAQLETVTRSIEAAETRTRV 450 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 + R + E + L + D + Sbjct: 451 MSRRLRDVEALPGEEASGLLGDALSGVDPDE 481 >UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae RepID=Q0BQ35_GRABC Length = 429 Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats. Identities = 84/401 (20%), Positives = 158/401 (39%), Gaps = 30/401 (7%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD-LREVTTRMEA 92 L R E S A+ + R ++ +L+ NT EV T A Sbjct: 23 SLPSRLAAAMEQSDARGRDETEAMRRHLLDMERALSAALREANTEAMGRIFSEVGTATGA 82 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG- 151 +Q + + +++ R +L R+ E + L + + + EQL Sbjct: 83 LRQDVTGSLGALRDAQGR---AIGDLHT-ALREGLDRLRESSEARLAEIRTAVNEQLHAA 138 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLT 211 +Q+ +SF + + + + ++Q + AQ+ + L + KT+G WGE + Sbjct: 139 VEKQMTESFARVIDQFTAVQKAMSDVQAVTAQIGD-----IKRLFSNVKTRGGWGEAQVR 193 Query: 212 RVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD--VVIDAKMTLVAYERYFN 269 +L+ L G YET + +D+ ++ VI+ + + + IDAK + YER Sbjct: 194 AMLDDV-LPPGS-YETNKRLRDDSDEVVEFAVIMPMKGDRPVYLPIDAKFPVEDYERLLA 251 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRK---DYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 A + E A + +A + I+ RK Y P RT+++ ++++P + + Sbjct: 252 ASEAGDVE-AERMAVAGLTRRIKDEARKIATKYVLPP--RTVEFAVLYVPTDALYAEI-A 307 Query: 327 RQPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 R P LI E + + ++++ P+ LRTI + A QI + Sbjct: 308 RVPGLIDEVGRLHRVLVLGPSVFPALLRTIHLGHVTLALEQKADQIRTL-------LGAT 360 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 +M + + L++ + S R A A RG Sbjct: 361 KTEMERMDKVLERLAKQAGTFSNTIESARVRTRAVARTLRG 401 >UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidaminococcus RepID=D2RMS8_ACIFE Length = 327 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 66/316 (20%), Positives = 131/316 (41%), Gaps = 30/316 (9%) Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + +Q R+ + L + L +++ V D + ++ Sbjct: 24 QKSLGAQEEIRAQQAREEADRLRNSLDQKVTLSMSVVSDRLAMVNRGLGSM--------- 74 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +AQ +L + L + K +G WGE+ L +L + +Y T V+I RS+ Sbjct: 75 --QSLAQGVGDLKKVLT-NVKNRGIWGEMQLGNLLGD--MLAPEQYGTNVAIRP--RSQE 127 Query: 240 QPDVIVRLPQGKD-----VVIDAKMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHI 291 + + +RLP + IDAK L Y+R A +D + AL++ +++ Sbjct: 128 RVEFAIRLPGRTGDAPVWLPIDAKFPLEDYQRLVQAREDGDADGETLALKQLEIRLKSEA 187 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKN-NIMLVSPTTLLV 350 + + K Y P + D+ L+++P+E F A+ R P L++E + + LV PTTL Sbjct: 188 KDIRDK-YIAPP--YSTDFGLLYLPLEGLFAEAVSR-PGLVSELQRKYRVTLVGPTTLAA 243 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 + ++ +R + Q+ +++ + F + + L +AQ +++ Sbjct: 244 VVNSLQMGFRTLVIQKQTSQVWRLVAQINTDLGAFQTAVERAEKKLAEAQSAM-ESVGDR 302 Query: 411 SSGRGNVLAQAEAFRG 426 + L +AE F Sbjct: 303 TRILKKHLDRAEKFTK 318 >UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2SRN1_MYCCT Length = 358 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 69/328 (21%), Positives = 137/328 (41%), Gaps = 13/328 (3%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L+ +F+ I + + E + +LN+L + +Q + + + D + +E + + Sbjct: 40 LNNKFDTNKELITKEIEKD-TEITKTNLNNLEKTVNKQKEDLTKSL-DKLEENIKEFNKI 97 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE--YETQ 228 T+ I + + + Q L+ K ++KT+GN GE L +L + ++TQ Sbjct: 98 TNNINTIDKKVDKSVQNINELSLIFK-NSKTRGNLGEFTLEWILTNVLGEKTDNGIWQTQ 156 Query: 229 VSIENDARSRMQPDVIVRLP-QGKDVVIDAKMTLVAYERYF-NAEDDYTRESALQEHIAS 286 +N S + D I++ K + ID+K L D Y A E + Sbjct: 157 YKYKN---SNVIVDAIIKTQINDKKIAIDSKFPLTKANILISENTDSYLYRQAEGEFKQT 213 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 ++N I+ L K + + V+MFIP E F L + ++ +EA+KN I + SPT Sbjct: 214 IKNMIKELNNKYISNSENVSS---VIMFIPSEAIFELIWSKFTDIFSEAIKNKIWICSPT 270 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL L + + S+N +I + D ++ +D + + +K + + Sbjct: 271 TLPAVLYSQQISIKEYKISKNINEIQKLIKTITDDVKRLLDRNEKMSKIYEKYKTETEEV 330 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 K+ + + + ++ +E Sbjct: 331 FKEFQTSANKIDKNYSKLESINIDDNQE 358 >UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT Length = 366 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 62/327 (18%), Positives = 129/327 (39%), Gaps = 15/327 (4%) Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 R + R ++ + RE L + + + K + + ++ +Q+ + Sbjct: 55 EVMERQLKDQRMTIEEQMKNHRETLSQQTKFISERLEKSSDVIREVQKQLGGIQEFGTDI 114 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 +L+ LK K +G GE L +LE ++ Y+TQ ++ + D + Sbjct: 115 K----DLSNILKS-PKLRGGLGEQFLYEILENFLPKD--LYKTQYKFKDGSIC----DAV 163 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 + +G + ID+K + ++ AE R+ + I+ V+ I + K LP Sbjct: 164 IFTDRG-IIPIDSKFPMENFKAMITAETQPERDKYKKMFISDVKKRIEEISSKYI--LPE 220 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 +T D +M++P E + + PE+ A NI++ SP TL L+ + ++ Sbjct: 221 EKTTDQAIMYVPSENVYYELIVNTPEIEDFAKNKNIVMASPNTLSYFLKVLLVAYQQHEL 280 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 ++ +I + + + F D++ + + + + + S G + + A Sbjct: 281 QKHTGEILKALAGIRVEANKFNADLNVLERHISNSYKTMDSVKSRYSRLLGRI-EKTHAI 339 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYR 451 G E + D E A Q+E Sbjct: 340 EKSGEEAIEKPEEDSNENAQEQNELLE 366 >UniRef50_B9CM15 RmuC domain protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM15_9ACTN Length = 440 Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats. Identities = 66/384 (17%), Positives = 154/384 (40%), Gaps = 26/384 (6%) Query: 56 EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ---QHADDKIRQMINSEQRLS 112 E + + L+ + ++ + SLE + + + + A +K R + + +S Sbjct: 52 EQSQVAVDGLDRRLVTMTNKVDSLERAMADFQAKTSKELGDVRVAQEKGR--ADMQAGIS 109 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLT 171 + + + + + + N +SL + + + ++L ++ SF + ++ Sbjct: 110 TTLKGVQDSV-SQQLIAIRQDNGKSLEQIRATVDDKLQKTLNDRISKSFEMVNNQLDAVS 168 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 + ++ MA+ +L + L + KT+G GEV L +LE E +Y+T V+ Sbjct: 169 KGLGEMR----GMAESVGDLRKVL-SNVKTRGIVGEVQLGAILEEVLSPE--QYDTNVAT 221 Query: 232 ENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAEDDYTR---ESALQEHI 284 D+ + + + V++P D + IDAK Y R +A+D E+A +E Sbjct: 222 VPDSSN--RVEFAVKIPGKDDEFVYLPIDAKFPGETYGRLEDAKDTGDAASVETAWKELE 279 Query: 285 ASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 +++ + + K Y P T + ++F+P E + ++R + + ++ + Sbjct: 280 TRLKSEAKDIHEK-YVAPPA--TTSFAILFLPFEGLYAEVVNRTGLVEQIQREWHVNVAG 336 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 P+T+ L + ++ + A +I S + ++ + ++ + L A Sbjct: 337 PSTVAALLNAVQMGFQTVAIQKRADEIQKVLSAVKAELPKYRRELEKAQKQLSTASKTID 396 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLG 428 + + L A L Sbjct: 397 GLVGTRTRAMERTLKGVTAIGSLS 420 >UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 Tax=Gluconobacter oxydans RepID=Q5FTW7_GLUOX Length = 410 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 63/358 (17%), Positives = 139/358 (38%), Gaps = 28/358 (7%) Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 R + ++ L R ++ R++ + +++ + + + + L Sbjct: 40 RLLEREAQERSQDVEYHRAHLSEVERVLSGRLDQFRLETSERLSTLARNLGQDQAEGRFL 99 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNL 177 + + +EQ + + + + EQL G +Q+Q SF + ++ + + + Sbjct: 100 LSDALREMAQSQNEQ----IERIRATVNEQLHGAVEKQMQTSFQRVVEQFSAMQKALGEV 155 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + AQ+ + L + KT+G WGE +L+ L EG Y+T + + Sbjct: 156 TSVTAQIGD-----LKRLFSNVKTRGGWGEAQCRAILDDI-LPEGS-YDTNFRLGTAGEN 208 Query: 238 RMQPDVIVRLP-----QGKDVVIDAKMTLVAYERYFNAEDDYT---RESALQEHIASVRN 289 + V++P + ID+K AYER NA + A +E +R+ Sbjct: 209 ---VEFAVKMPVRGTETPPRLAIDSKFPTEAYERLLNASEAGDALAERQARRELENVIRS 265 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK-NNIMLVSPTTL 348 + + K Y P T+++ ++++P + + R P +I E + +M++ P+ L Sbjct: 266 EAKKIASK-YILPP--VTVEFAVLYLPTDGLYAEI-ARMPGVIDEIGRLYRVMVMGPSLL 321 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 LRT+ + + IA +M + + ++ + +A Sbjct: 322 PAMLRTVHLGYVTLTLEERTEAIAGLLGATRQEMLRMDQVLEKLHRNAGTMGNTIEEA 379 >UniRef50_Q2NJ26 RmuC family protein n=5 Tax=Candidatus Phytoplasma RepID=Q2NJ26_AYWBP Length = 361 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 66/292 (22%), Positives = 131/292 (44%), Gaps = 20/292 (6%) Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQER-----HTLTHEIRNLQQLNAQMAQEAIN 190 +S + ++ L ++++ Q QD KE ++ L + ++ L++ NA QE N Sbjct: 53 ESESRVICRLDDKINNLNHQSQDILTKEIKDTRQHLTSNLENSLKVLREQNASGFQEVQN 112 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEA-SGLREGYEYETQVSIE--NDARSRMQPDVIVRL 247 + + L ++KT G GE +L R+LE S ++ +E Q ++ N+ +R++ DV+ + Sbjct: 113 IHKLLCQNDKT-GQAGEFLLARILENISHFKDKLVFEKQYLMKKTNNNGNRLKVDVMCK- 170 Query: 248 PQGK--DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 GK + ID+K + Y NA + + V+ I+ + + + Sbjct: 171 GYGKFIQIPIDSKFPTTDFLSYINATFNQIELK--NRFLFHVKERIKEVQK----YVSKE 224 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 Y +MFIP E F + PE+I+ A K+N+++ SP+ LL L ++ ++ Sbjct: 225 DNCPYAIMFIPSESIFAQI-NCDPEIISYAFKHNVIITSPSILLAILNSVDYYFQIFESV 283 Query: 366 RNAQQIADRASKLYDKMRLFIDDM-SAIGQSLDKAQDNYRQAMKKLSSGRGN 416 +N ++ + + M+ F + +L+K KK + Sbjct: 284 QNNEEKLECIENVLQAMKNFDKVFICDLKAALEKVLKVIEDIQKKEKTLDQR 335 >UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY08_ACICJ Length = 451 Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats. Identities = 79/425 (18%), Positives = 164/425 (38%), Gaps = 32/425 (7%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 + G + + ++A + A+ SE L + Q Sbjct: 29 IAALRGEIAEQSRAGLREAFDRVQDGARAQGEQLARLHGAMSELSILLTGKLAEAESAAQ 88 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKI-RQMINSEQRLSEQFENLANRIFEHSNRRVDE 132 + ++ R+ +Q D++ R + L E E L R+ E + Sbjct: 89 AGRAQGLSETMAAIARLTESQTLLADRMNRDLAGVSLALREGQEALRGRV-EQKLDEIRT 147 Query: 133 QNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 N L+++ + + E+L +++ +SF + A++ + I +Q + Q+ Sbjct: 148 GNEAKLDAMRAAVDEKLQSALEQKIGESFQRVAEQFAQVQQAIGQVQSVATQVGD----- 202 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP--Q 249 + L + K++G WGE + + L+ + L G + + D + +R+P + Sbjct: 203 LKRLFANVKSRGGWGEAQIRQTLDDT-LPPG---TFEANFRADPNGAEAVEFALRMPVRE 258 Query: 250 GKD---VVIDAKMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLP 303 G + IDAK Y+R A + R+ AL+ +R+ + + +K Y + P Sbjct: 259 GDQPVWLPIDAKFPTEDYDRLLLAAEAGDRDGETQALRALSTRIRDEAKKIAQK-YIRPP 317 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVALRTIANLWRYE 362 RT D ++++P E F R P L+ + ++ +++ SP+ L L TI Sbjct: 318 --RTTDIAILYLPSEGLFAEV-ARIPGLVEQVQREHRVLIQSPSLLPALLHTI------- 367 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q+ RA ++ + + +G+S++ Q K + S + + A Sbjct: 368 RVGHFTVQLERRAGEIGRILSAVKLEWGKLGESIEALAKRAEQLSKGIDSTQVRIRAVGR 427 Query: 423 AFRGL 427 R + Sbjct: 428 KLRDI 432 >UniRef50_B6GAF4 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF4_9ACTN Length = 461 Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats. Identities = 79/416 (18%), Positives = 153/416 (36%), Gaps = 39/416 (9%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV-------T 87 A +E E A+ +E E L +L ++ +L A L + Sbjct: 45 RARKERAAREEEVART----AEEASRAREALGAANAALSQLSVTLHAVLNQASSLSIIEQ 100 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 EA Q+ D ++ + + +S+Q +L E +V E L ++ Sbjct: 101 QHFEATQRSFDQTAAKVDDVRREVSQQL-DLNRDSVEQRLDKVRETVDAQLGAIRGDSER 159 Query: 148 QLDGFRRQVQDSFGKEAQERH---------TLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 +L+ R V + +R L R L + + +A +L R L + Sbjct: 160 KLEAIRVTVDEKLAATLNDRLGASFKQVSDQLEAVYRGLGDMQS-IAAGVGDLKRVL-SN 217 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP----QGKDVV 254 KT+G GEV L +L + +Y V+ + + + + V+LP + + Sbjct: 218 VKTRGILGEVQLGAILADILTPD--QYAENVATKPGSSE--RVEFAVKLPVEAGEPVWLP 273 Query: 255 IDAKMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 ID+K YER +A D E +A + ++ + + K L T ++ Sbjct: 274 IDSKFPGDTYERLRDAMDAGDAEGIAAARRALEQVIKLEAKDISSK---YLSVPETTNFG 330 Query: 312 LMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 +MF+P E + +DR P LI + + P+T+ V L ++ ++ R A + Sbjct: 331 IMFLPFEGLYAEVVDR-PGLIECLQRDYQVNVAGPSTMAVILNSLQMSYQTFAFQRRADE 389 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 I S + + + ++ + ++ A + ++ L A Sbjct: 390 IQKVLSAVKAEFPKYQAELRRALKQIETAGKTVDGIINTRTNVIERKLKSVTALED 445 >UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9V7_9ACTN Length = 451 Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats. Identities = 77/446 (17%), Positives = 162/446 (36%), Gaps = 51/446 (11%) Query: 25 YQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSL-QSINTSLEADL 83 + AE LA E+ L A + ++ ++ Q ++ + Sbjct: 34 RERGDSSAETLAALEQANNALDALNVALAETRRTANAIAQQQTTDAAVGQQRYLTIAREF 93 Query: 84 REVTTRMEAAQQHADDKI-RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + RM+ ++ ++ E RL + + + + N L+ + Sbjct: 94 SQAGDRMDDLRRETAQQLGANREGIEHRLDK-----VRETVDAQLGAIRKDNNVQLDQMR 148 Query: 143 SPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + + E+L ++ SF + + + + + ++Q +A +L R L G+ K Sbjct: 149 ATVDEKLSRTLNDRLSASFKQVSDQLEAVYKGLGDMQS----IATGVGDLKRVL-GNVKA 203 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP----QGKDVVIDA 257 +G GEV L +L + +Y V+ + + + + V+LP + ID+ Sbjct: 204 RGILGEVQLGAILADILTPD--QYLENVATKP--GASERVEFAVKLPVDEGDPVLLPIDS 259 Query: 258 KMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 K AYE +A++ E +A + V+ + K Y +P T ++ +MF Sbjct: 260 KFPGDAYEHLLDAQESGDAETVAAARKTLDTMVKREANDICEK-YLSVPA--TTNFGIMF 316 Query: 315 IPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 +P E + + R P LI ++ + P+T+ L ++ ++ + + Sbjct: 317 VPFEGLYAEVVSR-PGLIETLGRDYHVNVAGPSTMAAILNSLQMSYQTFKLQKRTDDVLR 375 Query: 374 RASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS---SGRGNVLAQAEAFRGLGVE 430 + ++ ++L +AQ A K + + R NV+ + + Sbjct: 376 V-------LSAVKAELPRYQKALRRAQQQIETAGKTVEGIITTRTNVME--RKLKDI--- 423 Query: 431 IKREINPDLAEQAVSQDEEYRLRSVP 456 D E A DE L S Sbjct: 424 -------DALEDAEEADEILGLTSAS 442 >UniRef50_C9MZ28 RmuC family protein n=5 Tax=Fusobacteriaceae RepID=C9MZ28_9FUSO Length = 377 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 51/311 (16%), Positives = 131/311 (42%), Gaps = 16/311 (5%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 + + E+++ + Q ++ + + + N+ S Q + +S+ ++++++ R+ Sbjct: 77 QNKLSENNEKLLLRFNQLGQNLSGTMNDNNQLLSKNHTENS-QLLTSSMNNNIQKLSVRL 135 Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 + + + + +F++ + + ++ ++ L+ + + E+L Sbjct: 136 NENNTALTGVMTENNQNLTKNINEFKDGLTKNINENFEKLSQKIENRLDVMNMKVEERLS 195 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 + +FG + I Q+ ++ ++L L D K++G +GE+ L Sbjct: 196 KGFEETTKTFGNVLERLSK----IDEAQKKIEALSSNVVSLQDILT-DKKSRGIFGEIQL 250 Query: 211 TRVLEA-SGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYF 268 ++L + G + Y+ Q + N D I+ P+ ++ +D+K L Y + + Sbjct: 251 YQILSSVFGEKNDKLYQKQYKLSNGT----IVDSIIFTPEPLGNIAVDSKFPLENYRKMY 306 Query: 269 NAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 N E RE+A ++ ++ ++ HI + K + T + ++F+P E F Sbjct: 307 NNELSQIERENARKDFVSDLKKHIDAISSK---YIIKNETSEQAILFLPAEAIFAEINAY 363 Query: 328 QPELITEALKN 338 ++I A K Sbjct: 364 HTDIIEYAYKK 374 >UniRef50_B3PMT9 RmuC domain protein n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMT9_MYCA5 Length = 453 Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats. Identities = 71/441 (16%), Positives = 174/441 (39%), Gaps = 36/441 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M ++++ IAL+G+ + Y + + + EE+ ++ + ++ Sbjct: 1 MLIALIILTTIALLGIIATIIVQLYFQKKALNKPQIKNEEIAEQIKNQLKPELETIKRDM 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTR-MEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + + VR L +E+ L ++ R +E Q++ + ++ S + ++ +F++L Sbjct: 61 SDSIKEDLVRKLNENKELVESKLNFLSQRFLEINQKNISNLNEELKKSPEAINVKFDDLR 120 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + + E + + + + E + ++++ F E L + + + Sbjct: 121 TN-LDRKLKDLSEATDRQVAKIKEEINEHFKSKVQEKLEEQFKDIQDEMLKLRTSVTDFK 179 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS-------- 230 L + + + ++K +GN+GE+ L +L+ ++ + + Sbjct: 180 TLQTDVQE-----LNKIFTNSKLRGNYGEMNLETLLKDMFTQDNWAKNVNIKKLSADEDS 234 Query: 231 --------IENDARSRMQPDVIVRLPQG---KDVVIDAKMTLVAYERYFNAEDDYTRESA 279 E+D + D +V+ + K + ID K L Y RY D Sbjct: 235 LKNATIDPTEDDINYKTMVDFVVKHYENNELKYIPIDCKFPLEDYNRYLETGD----LKY 290 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP--ELITEALK 337 ++ I+ V+ + + K Y P T +Y +M+IP E +D Q ++I + Sbjct: 291 KKDLISRVKKMAKDIATK-YINPP--ITTNYAVMYIPSESILAELIDGQDGFDVILNLEE 347 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 I+ + P + + L + + ++N+++I K + ++++ S + Sbjct: 348 KKILCLGPLQINLFLSNLRYNTKQYQMNKNSEKILALFEKTRKIFKSTLENLEKTKNSSN 407 Query: 398 KAQDNYRQAMKKLSSGRGNVL 418 K +N + ++ L N L Sbjct: 408 KITENIEKTLRDLGKINNNFL 428 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammapro... 438 e-121 UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfo... 372 e-101 UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassif... 367 e-100 UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reineke... 355 2e-96 UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter ho... 353 5e-96 UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteria... 353 8e-96 UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatu... 352 2e-95 UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter ca... 351 3e-95 UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricau... 348 2e-94 UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepI... 346 1e-93 UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfu... 345 1e-93 UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynuc... 345 2e-93 UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD 345 2e-93 UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromoh... 344 4e-93 UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bac... 344 5e-93 UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinob... 343 6e-93 UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuni... 343 7e-93 UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=... 343 8e-93 UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurel... 341 3e-92 UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma pro... 341 4e-92 UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermane... 341 4e-92 UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax... 340 5e-92 UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfuri... 338 2e-91 UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Altero... 338 3e-91 UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine ... 338 3e-91 UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisp... 337 4e-91 UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria ... 335 2e-90 UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobact... 335 2e-90 UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobact... 334 4e-90 UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4... 333 7e-90 UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 T... 333 7e-90 UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Maripro... 333 8e-90 UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=... 332 1e-89 UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiell... 332 2e-89 UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsu... 332 2e-89 UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B... 331 3e-89 UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio ja... 331 3e-89 UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma p... 329 1e-88 UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinom... 329 1e-88 UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 ... 329 2e-88 UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroi... 328 2e-88 UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellula... 328 2e-88 UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistip... 327 7e-88 UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaprote... 326 1e-87 UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacte... 326 2e-87 UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alterom... 324 4e-87 UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfo... 323 6e-87 UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candida... 321 5e-86 UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus... 320 5e-86 UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacte... 318 3e-85 UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=... 317 4e-85 UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingoba... 317 5e-85 UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasm... 317 6e-85 UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine ... 317 6e-85 UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinel... 317 8e-85 UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methano... 317 9e-85 UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp.... 315 2e-84 UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candida... 315 3e-84 UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepI... 314 4e-84 UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychro... 313 1e-83 UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira cruno... 313 1e-83 UniRef50_Q0S487 Possible DNA recombination protein, RmuC family ... 312 2e-83 UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoc... 312 3e-83 UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum cente... 310 6e-83 UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaprot... 308 2e-82 UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepI... 308 2e-82 UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family ... 308 3e-82 UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromo... 307 4e-82 UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodoba... 307 7e-82 UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candida... 307 9e-82 UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=... 305 2e-81 UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovib... 305 2e-81 UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=... 305 3e-81 UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammapr... 303 1e-80 UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylo... 303 1e-80 UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinom... 302 2e-80 UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium... 302 2e-80 UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=u... 301 2e-80 UniRef50_B9L835 DNA recombination protein RmuC family protein n=... 301 3e-80 UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID... 301 3e-80 UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitino... 301 5e-80 UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G... 300 6e-80 UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sangui... 300 7e-80 UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinom... 300 8e-80 UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorob... 300 9e-80 UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadal... 300 9e-80 UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacter... 298 2e-79 UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschi... 297 5e-79 UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingiv... 297 5e-79 UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothi... 296 9e-79 UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victiva... 296 9e-79 UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 T... 296 1e-78 UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithio... 296 1e-78 UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Ta... 296 1e-78 UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudom... 295 2e-78 UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geoderm... 294 5e-78 UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicol... 292 2e-77 UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campyloba... 291 2e-77 UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinis... 291 5e-77 UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalk... 290 6e-77 UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibac... 290 6e-77 UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Z... 290 8e-77 UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamur... 290 1e-76 UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingo... 290 1e-76 UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkerma... 289 2e-76 UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Ta... 288 2e-76 UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=... 288 3e-76 UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actino... 287 5e-76 UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordoni... 286 2e-75 UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutu... 285 2e-75 UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammapr... 285 3e-75 UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmoto... 285 3e-75 UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbel... 284 6e-75 UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxi... 283 1e-74 UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicob... 281 3e-74 UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalk... 281 4e-74 UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenb... 281 4e-74 UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCV... 280 6e-74 UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukam... 280 7e-74 UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardi... 280 9e-74 UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis a... 280 1e-73 UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=unculture... 280 1e-73 UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis... 279 2e-73 UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus ... 278 2e-73 UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotr... 278 3e-73 UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8... 278 3e-73 UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfo... 277 7e-73 UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanim... 275 3e-72 UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16... 275 4e-72 UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W... 274 7e-72 UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Co... 273 1e-71 UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaerom... 273 1e-71 UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacteriu... 272 2e-71 UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=... 271 4e-71 UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas R... 270 7e-71 UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 ... 270 8e-71 UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotell... 270 1e-70 UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicob... 266 1e-69 UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=... 266 2e-69 UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninog... 265 2e-69 UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=P... 264 5e-69 UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=... 263 9e-69 UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmati... 262 2e-68 UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae Rep... 262 2e-68 UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimi... 262 2e-68 UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=... 261 3e-68 UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibroba... 260 7e-68 UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacteri... 259 2e-67 UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=... 259 2e-67 UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula b... 256 9e-67 UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Microc... 255 3e-66 UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID... 255 3e-66 UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacter... 254 6e-66 UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanoba... 249 1e-64 UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinob... 249 2e-64 UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=F... 246 1e-63 UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus ... 244 6e-63 UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinom... 243 2e-62 UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenit... 240 7e-62 UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Microc... 235 2e-60 UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, ... 235 4e-60 UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmati... 234 4e-60 UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C... 229 2e-58 UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 ... 229 2e-58 UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campyloba... 228 5e-58 UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. ora... 227 8e-58 UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocan... 226 1e-57 UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B... 226 1e-57 UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimi... 226 2e-57 UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteri... 224 8e-57 UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter pr... 223 1e-56 UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythro... 222 2e-56 UniRef50_B0MP59 Putative uncharacterized protein n=1 Tax=Eubacte... 222 3e-56 UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria... 221 3e-56 UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=M... 221 6e-56 UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opituta... 219 2e-55 UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betapro... 217 8e-55 UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=... 214 4e-54 UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bactero... 214 5e-54 UniRef50_C8W9S7 Putative uncharacterized protein n=1 Tax=Atopobi... 214 6e-54 UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostri... 214 6e-54 UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 ... 212 3e-53 UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales Rep... 211 4e-53 UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovo... 211 5e-53 UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaprot... 211 6e-53 UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6B... 210 7e-53 UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q... 210 1e-52 UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychro... 209 2e-52 UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LR... 208 6e-52 UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured ... 206 1e-51 UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodoba... 206 1e-51 UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=... 206 1e-51 UniRef50_A8SFR6 Putative uncharacterized protein n=1 Tax=Faecali... 206 2e-51 UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae Re... 205 4e-51 UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured ... 204 7e-51 UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepI... 204 8e-51 UniRef50_C7H3S0 RmuC domain protein n=2 Tax=Firmicutes RepID=C7H... 203 1e-50 UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID... 203 1e-50 UniRef50_A6GP11 Putative uncharacterized protein n=1 Tax=Limnoba... 202 2e-50 UniRef50_B4S924 Putative uncharacterized protein n=2 Tax=Chlorob... 201 3e-50 UniRef50_B0P9L0 Putative uncharacterized protein n=1 Tax=Anaerot... 201 5e-50 UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi... 201 6e-50 UniRef50_D1PNL6 RmuC domain protein n=2 Tax=Ruminococcaceae RepI... 201 7e-50 UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Therman... 200 9e-50 UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K... 200 9e-50 UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitr... 200 1e-49 UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=B... 199 1e-49 UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia... 199 2e-49 UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammapr... 198 3e-49 UniRef50_B6YRP9 DNA recombination protein rmuC homolog n=1 Tax=C... 198 4e-49 UniRef50_B0VIW8 DNA recombination protein rmuC homolog n=1 Tax=C... 197 6e-49 UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE0... 197 8e-49 UniRef50_B9CM15 RmuC domain protein n=1 Tax=Atopobium rimae ATCC... 196 2e-48 UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimo... 196 2e-48 UniRef50_B2T5V8 Putative uncharacterized protein n=7 Tax=Burkhol... 196 2e-48 UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter pisco... 195 3e-48 UniRef50_B6GAF4 Putative uncharacterized protein n=1 Tax=Collins... 193 1e-47 UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B... 193 1e-47 UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvima... 193 1e-47 UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostri... 192 3e-47 UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamon... 192 3e-47 UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidl... 191 5e-47 UniRef50_A3HRV1 Putative DNA recombination-related protein n=1 T... 191 5e-47 UniRef50_A6SXN7 Uncharacterized conserved protein n=8 Tax=Bacter... 191 7e-47 UniRef50_B2IM63 Competence-induced protein Ccs50 n=69 Tax=Strept... 189 2e-46 UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphapr... 189 2e-46 UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collins... 189 2e-46 UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH ... 188 5e-46 UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 ... 186 2e-45 UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8... 186 2e-45 UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteur... 186 2e-45 UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus la... 185 4e-45 UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacte... 183 1e-44 UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax... 182 2e-44 UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Strepto... 182 2e-44 UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidami... 180 1e-43 UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracil... 179 2e-43 UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicu... 178 3e-43 UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 ... 176 1e-42 UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncul... 175 3e-42 UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae Rep... 174 7e-42 UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacte... 173 1e-41 UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiph... 172 3e-41 UniRef50_B3PMT9 RmuC domain protein n=1 Tax=Mycoplasma arthritid... 170 9e-41 UniRef50_C7GZ78 Competence-induced protein Ccs50 n=1 Tax=Eubacte... 170 1e-40 UniRef50_A4GHX6 Putative uncharacterized protein n=1 Tax=uncultu... 169 2e-40 UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=... 167 5e-40 UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1... 166 1e-39 UniRef50_D0JBI8 RmuC family protein n=2 Tax=Blattabacterium RepI... 166 2e-39 UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma my... 163 1e-38 Sequences not found previously or not previously below threshold: >UniRef50_P0AG72 DNA recombination protein rmuC n=82 Tax=Gammaproteobacteria RepID=RMUC_ECO57 Length = 475 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 475/475 (100%), Positives = 475/475 (100%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA Sbjct: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN Sbjct: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL Sbjct: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ Sbjct: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ Sbjct: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR Sbjct: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ Sbjct: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR Sbjct: 421 AEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 >UniRef50_C6BRK2 Putative uncharacterized protein n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BRK2_DESAD Length = 474 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 161/448 (35%), Positives = 284/448 (63%), Gaps = 3/448 (0%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAEL---SAAKQQITQSEHWRA 60 + ++ ++G+ I + + A++K + ++ + +L + ++Q TQ + Sbjct: 16 LLGIFFAGLVLGMIISAVIGKRRLAEEKEKVEGLQDHLQEQLQLGARLEEQATQLPELKK 75 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E + L + ++L + ++ ++ +K+ + +++ LS++F++LA Sbjct: 76 ELAQQRAQKHKLTTAYSNLYGKYKATKANLDNEKKQGQEKLTLLQEAKEELSDKFKSLAG 135 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 I E +++ +QN ++ +L+PL ++ F+ QV+ ++ +E ++R L +++ L L Sbjct: 136 EILEEKSKKFTDQNATNIKQILAPLGVKIHEFQEQVEKAYFQEGKDRSELAAQVKQLMNL 195 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 N Q++ +A NLT+ALKG +KT+G+WGE++L RVLEASGLR+ +EY QVS +R+Q Sbjct: 196 NRQLSDDAHNLTKALKGQSKTRGDWGELILERVLEASGLRKDHEYTVQVSHTRQDGTRVQ 255 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDV++ LP+ K +V+D+K++L Y +Y AED+ RE AL+ HI S++ H++ L K+YQ Sbjct: 256 PDVVIHLPEEKHLVVDSKVSLTDYLKYTEAEDETKREVALKGHINSIKAHLKGLSTKNYQ 315 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 L G+++ D+V+MF+P+EPAF LA+ L EA N+++VSP+TLL +RT+A++WR Sbjct: 316 DLYGIKSPDFVIMFVPIEPAFALAISNDVALWQEAWNKNVLIVSPSTLLFVIRTVAHIWR 375 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 E Q++NAQ+IA+R + LYDK R F+DD+ +G+ + + QD+Y +A KL +G GN++ Q Sbjct: 376 QERQNQNAQEIANRGAILYDKFRNFVDDLEKVGERIRQTQDSYEKARTKLCNGSGNLIRQ 435 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDE 448 AE + LGV+ KR I DL E+A+ DE Sbjct: 436 AEMLKELGVKPKRSIKKDLTEEALGSDE 463 >UniRef50_A4A943 DNA recombination protein rmuC n=2 Tax=unclassified Gammaproteobacteria RepID=A4A943_9GAMM Length = 477 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 148/465 (31%), Positives = 251/465 (53%), Gaps = 2/465 (0%) Query: 6 MVYAVIALV-GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +VYA+ L+ G I WL+ + ++ + + A+RE + A +++ E + + Sbjct: 11 LVYAIAGLIFGAIIAWLWRGAELSKTRGDLDAQRERLQELEIAHASLLSEREVLAEQFQS 70 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 +N V LQ SL ++ R A Q+ +++ + S+Q+L+ +FENLANRIFE Sbjct: 71 MNERVTELQLERNSLATTNAGLSARQTADQEKHKEQLALLERSKQQLAIEFENLANRIFE 130 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 ++ + N+QS+ SLL P EQ+ F+ ++ + + + +L E+R + + +M Sbjct: 131 ERGKKFSQDNQQSMESLLKPFGEQIHRFQSRINEVHAQSIRGNESLAGELRTMMGVGLKM 190 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 + +A NL +ALKGD KT GNWGEV L R L+ +GL G YE Q S + PD + Sbjct: 191 SDQAENLAKALKGDKKTTGNWGEVQLERTLQLAGLEPGSHYEAQSSFRDSEGRLRIPDFV 250 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 ++LP GK ++ID+K++LV Y+R AE D R AL+ H A+++ HI L KDY L G Sbjct: 251 IKLPDGKHLIIDSKVSLVDYDRAVAAESDEERNEALKAHGAALKRHIDDLSSKDYSALSG 310 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + + + V MF+P+E A++ AL EL + + N+++VS TTLL LRT+A+LW Sbjct: 311 MNSPELVFMFMPIEAAYIEALKFNRELFNDGYQKNVIMVSHTTLLPMLRTVASLWIAFRS 370 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + A++I+ A +Y+K+ L + + +G++L A D Y + + L +G + + E F Sbjct: 371 NEEAREISGMAGDIYNKVCLVGNRLEDMGKTLSTATDKYNKTVTALVGKQG-LYGKVERF 429 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDE 469 + K E+ + + + ++ + P A D E Sbjct: 430 KSTAANAKGELPKPATQHPNIEHDRLKILTEDTPPQLTAADADKE 474 >UniRef50_A4B9B0 Putative uncharacterized protein n=1 Tax=Reinekea blandensis MED297 RepID=A4B9B0_9GAMM Length = 472 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 153/457 (33%), Positives = 269/457 (58%), Gaps = 6/457 (1%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQH------AQQKAEQLAEREEMVAELSAAKQQITQSE 56 F ++ +++ V + W Q Q ++ + + AE + + Q+ Q Sbjct: 14 FGLLSTVLVSTVIGTLFWSRWRRQQLLLEEMQQALHQERSLSARLAAENAGLQVQVRQLT 73 Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 +A+ + ++ LQ +LE+ L ++ R E+A+ H ++++ + +S ++L F Sbjct: 74 ELQAQLTAKDQQLNLLQREVRTLESRLADINARAESAKAHHAEQLQLLNDSREQLKRDFG 133 Query: 117 NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRN 176 LAN IFE +R EQ++ S+ +LL P Q++ FR++V D ++ + R L ++ Sbjct: 134 QLANDIFEQKQQRFSEQSKASITALLDPFHRQIEQFRQRVDDIHSRDVEGRSQLLTQLSV 193 Query: 177 LQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR 236 L+ +N+Q+ ++A +LT+ALKGD K QGNWGE+ + R+LE+SGL++G E+E + + ++D Sbjct: 194 LKDMNSQLNRQADDLTKALKGDKKLQGNWGELQIERILESSGLQKGREFEREANYKDDQG 253 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 +PD I+ LP GK ++ID+K++L AY++ A+D+ TR +ALQ H+++VR+HI L Sbjct: 254 QNRRPDFIIHLPDGKHIIIDSKVSLNAYQKAVAADDEATRNTALQAHVSAVRHHIHALSA 313 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K+Y L GL + D+VLMF+PVE AF+ A ++ +L EA + +I++V+PTTLL LRT+A Sbjct: 314 KNYPGLSGLNSPDFVLMFMPVESAFIAAFEQDSQLFNEAFERHIVVVTPTTLLATLRTVA 373 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 NLW E Q+ NA+++ A K+YDK+ +F M +G + A + +A+ S GRG+ Sbjct: 374 NLWVLERQNENAKELYALAGKIYDKVAVFSRKMDKLGTQIQSADRTFHEALNTFSDGRGS 433 Query: 417 VLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 +L+ E + +G + I+ + V +D Sbjct: 434 MLSYVERLKEMGAPTSKSISDTHRPRMVGEDAPEAED 470 >UniRef50_C1DDJ8 Putative alpha helix chain n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDJ8_LARHH Length = 495 Score = 353 bits (907), Expect = 5e-96, Method: Composition-based stats. Identities = 186/415 (44%), Positives = 267/415 (64%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 LA+ + + +E + ++ + A + + + Q + L A + TR++A Sbjct: 72 LAQLDALRSERAQLLERAGRLPELEAALQHSRGQQEAAQQLVAELRAQCAQAETRLQAEV 131 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 ++K+ + + ++LS QF N+AN + E +RR EQNR+SL ++L PLRE+L F R Sbjct: 132 AQGEEKLALLREAREQLSVQFRNVANELLEEKSRRFVEQNRESLGAVLEPLRERLGEFTR 191 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 +V+ S+ +EA+ER +L E+ L +LN +++ +A+NLTRALKG NK QGNWGEVVL VL Sbjct: 192 KVESSYAQEAKERFSLQQEVLRLAELNRKISDDAVNLTRALKGSNKQQGNWGEVVLESVL 251 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 E+SGLR G EYE Q S + R QPDV+V LP+G+D+VID+K+TL AY RY AE+D Sbjct: 252 ESSGLRRGQEYEVQTSFTREDGQRHQPDVVVHLPEGRDIVIDSKVTLTAYSRYVEAEEDA 311 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 R+ AL++H+ +VR H++ L K Y L LR+LD+VL+FIPVEPAF+LA+ EL + Sbjct: 312 ARQLALRQHLDAVRAHVKGLSAKRYDTLYDLRSLDFVLLFIPVEPAFMLAVTEDRELFAD 371 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A N++LVSP+TLL LRTIANLWR QS NAQ+IA +A LYDK FI D+ IG+ Sbjct: 372 AYARNVLLVSPSTLLATLRTIANLWRQAQQSHNAQEIARQAGALYDKFVGFIGDLDDIGR 431 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 L + + + A KLSSGRGN++ Q E R LGV+ + I E+A + D + Sbjct: 432 HLTQTRQAFDGACNKLSSGRGNLVRQTERLRELGVKPGKSIPAGWKEKAGADDAD 486 >UniRef50_D2TWP3 DNA recombination protein n=3 Tax=Enterobacteriaceae RepID=D2TWP3_9ENTR Length = 445 Score = 353 bits (906), Expect = 8e-96, Method: Composition-based stats. Identities = 261/446 (58%), Positives = 344/446 (77%), Gaps = 1/446 (0%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD ++ + L G G AQ+ ++ +E + + ++ +++I E+W+ Sbjct: 1 MDIQLLYAIIGFLTGTLFGGSLIWLVIAQKMNKKESELRDFYSIQASYEEKIAHLEYWKI 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 ECE + E+RS + IN + E +LREV TR+E + ++K R ++NSEQRL+ QFENLAN Sbjct: 61 ECEHRDQELRSQREINRNQEVELREVMTRLEETRLAFEEKQRLLLNSEQRLNVQFENLAN 120 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 RIFE + RR EQNRQSL +LL+P REQLDGFRRQV +SF +EA+ERHTL HEIR LQQL Sbjct: 121 RIFEQNERRASEQNRQSLIALLTPFREQLDGFRRQVHESFSQEARERHTLAHEIRQLQQL 180 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 NA+MA+E INLT+ALKGD K QGNWGE +L+R+LEASGLR+G+E+ETQVSI N + SR Q Sbjct: 181 NAEMAKETINLTKALKGDTKIQGNWGETILSRILEASGLRQGHEFETQVSI-NTSNSRYQ 239 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVI+RLPQGKDVVIDAKM+L AYE YFN+ED+ R +AL+ H+ SVRNHI+ LGRKDY Sbjct: 240 PDVIIRLPQGKDVVIDAKMSLTAYEHYFNSEDEQQRATALRGHVNSVRNHIKELGRKDYH 299 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 QL GLR+LDYVLMFIP+EPA+L+AL PELI E L+NNI+LV P+TLLVA+RTI NLWR Sbjct: 300 QLNGLRSLDYVLMFIPLEPAYLIALREAPELIDEGLRNNILLVCPSTLLVAVRTINNLWR 359 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 YE QS+NAQ IA+RA+++YDKMRLF+DD+ +GQSL KAQ NY+ A+KKL+ G+GN+++Q Sbjct: 360 YERQSQNAQVIAERAARMYDKMRLFVDDIQVLGQSLSKAQLNYQSAIKKLAEGKGNLISQ 419 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQ 446 AE+ + LG+E+KR I+ + ++Q Sbjct: 420 AESLKELGIEVKRPIDTEFSKQTAKS 445 >UniRef50_Q7VRJ0 RmuC family, DNA recombination n=1 Tax=Candidatus Blochmannia floridanus RepID=Q7VRJ0_BLOFL Length = 491 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 208/395 (52%), Positives = 302/395 (76%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E+ ++LSA ++++ ++ + E +N ++ + N + E +L+E+ R+E + A + Sbjct: 77 ELNSKLSAVEERLKLISCYQQKYEQINAKLNIQLNTNHTQELELKELRIRLEEYKLSATE 136 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 K + +INSE RL+ QFENLANRIF+HS ++ EQNR +LN++L PL+EQL+ F++Q+QD+ Sbjct: 137 KEKLLINSENRLTMQFENLANRIFDHSRIKIHEQNRLTLNNVLYPLQEQLNTFKKQIQDN 196 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 F KE + R+ LT+EI NL QLN ++ QEAINLT+ALKG+NKTQGNWGEV+LTR LE SG+ Sbjct: 197 FSKEERMRNDLTYEIHNLHQLNTKITQEAINLTQALKGNNKTQGNWGEVILTRTLETSGM 256 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 REG+E+ QV+I+ ++QPDVIV LP GK+V+IDAK++L+AYERYFN D +++A Sbjct: 257 REGHEFHLQVNIQETNGRKLQPDVIVHLPNGKNVIIDAKVSLIAYERYFNYNDKKDKQTA 316 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 + +HI S+R HI+ L +K+YQ+L L+TLDY+LMFIP+E AF +A+++ P L+T+A+ N Sbjct: 317 MNDHIHSLRTHIKSLNKKNYQELFQLKTLDYILMFIPIESAFSIAIEKDPTLLTDAMNRN 376 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 IMLVSPTTLLVALRTI NLWRYEHQ+ +A++IA++A +LYDK+RLF++D++ IG L K Sbjct: 377 IMLVSPTTLLVALRTIHNLWRYEHQNLHAKKIAEKAGRLYDKLRLFMEDVNKIGFYLHKT 436 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 + Y A KLS G+GN++ Q E FR LGV+IK+ Sbjct: 437 ETMYNSAKNKLSEGKGNIITQIEGFRKLGVQIKQP 471 >UniRef50_Q3A440 Putative alpha helix chain n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A440_PELCD Length = 462 Score = 351 bits (900), Expect = 3e-95, Method: Composition-based stats. Identities = 181/462 (39%), Positives = 290/462 (62%), Gaps = 5/462 (1%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKA-EQLAEREEMVAELSAAKQQI----TQSEH 57 ++A G +G LFA+ ++ A +Q A R+E + + ++++ + Sbjct: 1 MEWFIFAGAFCAGSVLGVLFAAMFLQRRSATDQQAFRQEAASIQAVLEERLAARSQEIAS 60 Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 E E T+ A + T++ ++ A +K++ + ++++++ +F++ Sbjct: 61 LLERLEKSQQERMRTAQALTAATASQASLETKLAEERKQAAEKLQLLNDAKEQMKLEFQS 120 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 LA RIFE +R + +Q+R +L+ LL P R QL F ++V +++ +EA+ER +L EI L Sbjct: 121 LAYRIFEDKSRNLVDQSRSNLDQLLHPFRAQLKDFEKKVDETYQREARERFSLRQEIVRL 180 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 Q+ N Q+ +AINLT ALKG KTQG WGE+VL R+LE SGL +G EYE Q S + Sbjct: 181 QECNQQIQTDAINLTNALKGQVKTQGIWGEIVLERILEQSGLHKGREYEAQGSFRDAQGR 240 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 +++PD++V LP+ KD+V+D+K++L+AYERY NA +D R AL++H+ S+ +HI+LL K Sbjct: 241 QLRPDIVVHLPENKDIVVDSKVSLIAYERYVNASEDEQRSLALRQHLTSLHSHIKLLQSK 300 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 YQ LPGLR+LD+VLMFIPVE AF+LAL+ L +A N+M+VSP+TLL+ LRTI N Sbjct: 301 HYQALPGLRSLDFVLMFIPVEGAFMLALEEDETLFRKAFAQNVMIVSPSTLLLTLRTIQN 360 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 +WRYE+Q++NA +IA +A LYD F++D+ IG L+K + Y QA K+L++GRGN+ Sbjct: 361 IWRYEYQNQNAVEIARQAGNLYDHFVRFVNDLEKIGDLLEKTRQTYGQAHKRLTTGRGNL 420 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 + +AE+ R LG++ + ++P + E A ++ S Sbjct: 421 VRRAESLRQLGIQNSKVLSPIIRENARIDLDDTDAFSNEPAT 462 >UniRef50_Q0ASK3 Putative uncharacterized protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASK3_MARMM Length = 527 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 155/460 (33%), Positives = 261/460 (56%), Gaps = 16/460 (3%) Query: 5 IMVYAVIALVGVAIGWLFASY--------------QHAQQKAEQLAEREEMVAELSAAKQ 50 +++ ++ L+ V G LF + ++ + +E +EL+ A++ Sbjct: 46 LILAGMVVLLAVLAGGLFLQRKPDPSGTTDNPEVERLRSERDDWRNRQESAASELATARE 105 Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 + + + E + L + ++ L A + T +AA +H D+K+ ++ + +R Sbjct: 106 ALARLDGVVEERDRLRVSLEAVTVERNGLNASHEALKTEHDAALRHHDEKLAELEKARER 165 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L++QF+ A I + S +++Q+ +SL +LL PLREQL FR +V+ + + Sbjct: 166 LNDQFKLTAAEILKASGAELNKQSTESLQTLLKPLREQLTDFRSKVEKDAEQRHGHAGEI 225 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 + +++ ++M+ +A L AL+ +K QG+WGE+VL +LE +GL E + TQ + Sbjct: 226 KQLMETVRKDASRMSDDAQKLANALRSSSKVQGDWGEMVLASILERAGLLENEHFHTQST 285 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 N + ++PDVIV +P G +VID+K++LVA+ER NAEDD R +AL++HIASVR H Sbjct: 286 ERNAEGALLRPDVIVDMPGGHRLVIDSKVSLVAFERCVNAEDDEIRTAALKQHIASVRAH 345 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 I+ LG KDY +L +++ LMFIP+E A LAL PEL A N+M+ +PTTL++ Sbjct: 346 IKALGEKDYAKLYEG--VNFTLMFIPLEGAASLALQNDPELSAYAWDRNVMIATPTTLMM 403 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 A+RT+ NLW + Q+R+A IADRA LYDK F+ D+ +G+ +D A+D + A KL Sbjct: 404 AMRTVGNLWTIDRQNRHAIDIADRAGALYDKFEGFVGDLETVGKRIDGAKDAWAAAKGKL 463 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 GRGN++ Q E + LG ++ + + + A + + Sbjct: 464 VEGRGNLVRQTEMLKSLGANARKSLPAEYLDAAGADEATE 503 >UniRef50_A4ST62 DNA recombination protein n=2 Tax=Aeromonas RepID=A4ST62_AERS4 Length = 446 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 219/434 (50%), Positives = 303/434 (69%), Gaps = 7/434 (1%) Query: 18 IGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINT 77 +GWL + Q+ E L +E A + + + E ++ Q++ Sbjct: 20 VGWLAGRRFASAQEQELLLTQERHQA-------LQDRFDELQDERMQGQQKLDQQQTLLI 72 Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 L A L++ + + + A +K++ + EQRLS+QFENLANRIFE ++ + N+ S Sbjct: 73 KLTARLKDAEATLRSERLAAAEKLQLQRDGEQRLSQQFENLANRIFEQNSGNFRDLNQNS 132 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+ LL+PL+EQL+GFRRQV ++ +E +RH+L E+ L +LNA+M +EA LTRALKG Sbjct: 133 LDLLLTPLKEQLEGFRRQVGETHAQETAQRHSLKFELERLAELNARMTEEAAALTRALKG 192 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDA 257 D+K QGNWGEVVL R+L GLREG+EY TQV+IE D R QPDVIV LPQ KD++IDA Sbjct: 193 DSKQQGNWGEVVLARILSECGLREGHEYHTQVNIELDKGKRYQPDVIVHLPQEKDIIIDA 252 Query: 258 KMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPV 317 K++L AYER++N +D + AL+EH+ASVRNHIR LGRKDYQQLPG+RTLDYVLMF+ V Sbjct: 253 KVSLTAYERWYNTDDALEKAVALKEHVASVRNHIRELGRKDYQQLPGVRTLDYVLMFVAV 312 Query: 318 EPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 EPAFL AL+ P L+ L NNI+LVSPT L+VALRTI NLWRYE Q++NA+QIA+RA + Sbjct: 313 EPAFLTALEADPSLVRFGLDNNILLVSPTNLMVALRTIENLWRYERQNQNARQIAERAGR 372 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 LY+K+RLF+++M +G SL KAQ++Y +AM +L +GRGN++AQ E FR LGVE+ + + Sbjct: 373 LYEKLRLFVEEMQQMGGSLHKAQESYDKAMGRLVNGRGNLIAQVERFRELGVEVTKPLPE 432 Query: 438 DLAEQAVSQDEEYR 451 L +A+ +++ Sbjct: 433 TLVNRALEREDPAE 446 >UniRef50_Q1JYL9 Putative uncharacterized protein n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JYL9_DESAC Length = 446 Score = 345 bits (886), Expect = 1e-93, Method: Composition-based stats. Identities = 171/442 (38%), Positives = 271/442 (61%), Gaps = 6/442 (1%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 ++ A+ +A+ + + R + L + ++ + + Sbjct: 9 WLWGCGAIGLLALVYAWGRLIF------LRGLRRRLDESLVRVDESQRLTQVLQQQLADR 62 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 + R+LQ E+TTR+E +Q + +K ++ ++++L++QF+ +A IF+ Sbjct: 63 EQQNRALQQAVEHARLQTAEMTTRLELERQQSAEKQALLLEAKEQLTQQFKVVAGEIFDE 122 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 R+ E NR+ L+ LL+PLR+QLDGFR++V D + +ER TL E+ L+ LN QM+ Sbjct: 123 RGRQFKEVNREELSQLLTPLRQQLDGFRQKVDDVHVTDVRERATLRQELEQLRGLNQQMS 182 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 ++A LTRALKGD K QGNWGE+VL R+LE SGLR G EYE Q S + ++PDVI+ Sbjct: 183 EDARQLTRALKGDRKVQGNWGELVLERLLEQSGLRRGVEYEVQGSFRDADNRLLRPDVII 242 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 LP+GKD+++D+K++L +YER +D R+ L++H+ +V H+ L K Y L G+ Sbjct: 243 HLPEGKDIIVDSKVSLSSYERSCREDDPEQRQQCLKQHVQAVCQHVLGLSEKHYANLKGV 302 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 R+LD+V+MF+P+E A ++AL + EL EA ++++VSPTTLL LRTI N+WR+E Q+ Sbjct: 303 RSLDFVVMFMPIEAALVVALQQDGELFNEAFDRHVVMVSPTTLLATLRTIENIWRFERQN 362 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 +NAQ IAD+A +YDK+R F+++M +G LD Y AM KLS GRGN+++QA F Sbjct: 363 QNAQAIADKAGAIYDKLRGFVEEMEKLGTQLDTVGHTYTAAMNKLSQGRGNLISQASRFV 422 Query: 426 GLGVEIKREINPDLAEQAVSQD 447 LGV++K+ + + E+A + Sbjct: 423 DLGVKVKKTLPATVMERAELDE 444 >UniRef50_A4SV40 Putative uncharacterized protein n=2 Tax=Polynucleobacter necessarius RepID=A4SV40_POLSQ Length = 424 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 165/395 (41%), Positives = 246/395 (62%) Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 + + SL++ + + +++ ++ +I + +++ L+ Sbjct: 30 SSLTRAELSAQTEAALALSLRTERDQALQNAIRLEAELDSERKQGLGRIESLNEAKEALT 89 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 QF+NLAN I E ++R EQN SL++LL PL+ +L F+ QV S+G EA+ER L Sbjct: 90 SQFKNLANEILEDKSKRFTEQNAASLDALLKPLQTKLTEFKEQVSTSYGNEARERFALKS 149 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 EI L LN +M+ E +LT+ALKGD+K QGNWGE+VL +LE+SGLR+G EY Q S Sbjct: 150 EIERLANLNLRMSDETRSLTQALKGDSKVQGNWGELVLESILESSGLRKGEEYVVQDSHT 209 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 SR+QPDV+++LP+G+ +V+D+K+++ AY R+ D E L HI S+R HI+ Sbjct: 210 QTDGSRLQPDVVIKLPEGRSLVVDSKVSITAYARHAETTDPELAEKELAAHIQSLRQHIQ 269 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K+Y L G+ ++D+VLMF+P+EPAFLLAL P L EAL NI+LV P+TL+ L Sbjct: 270 GLSGKNYSSLYGVGSVDFVLMFVPIEPAFLLALKTAPNLYQEALAKNIVLVCPSTLMATL 329 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 RT+A+LWR +HQ+RNA +IA + LYDK F+DD+ +GQ LD+AQ +Y A KL + Sbjct: 330 RTVAHLWRQDHQNRNALEIAKQCGNLYDKFVGFVDDLEKLGQRLDQAQTSYHDAFNKLKT 389 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 G+GN++ AE R LGV+ + ++ L E + D Sbjct: 390 GKGNLIRSAEKVRELGVKPSKNLSTPLIESSAEND 424 >UniRef50_B4RYY9 RmuC n=4 Tax=Alteromonadales RepID=B4RYY9_ALTMD Length = 429 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 201/398 (50%), Positives = 281/398 (70%) Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSE 108 + + +H +CE L E+ S + + L A R++A +DK+ M SE Sbjct: 32 QTVAARMKHVTKQCEQLQTELNSERIASAKLHAQNEAHQARIQALHTAHEDKLAAMNASE 91 Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 QRL QFENLANRIFE +R +Q + ++ ++L+P + +LDGF+RQ+ + +E QER Sbjct: 92 QRLHTQFENLANRIFEEKQQRYTQQTKHNIEAVLAPFKNELDGFKRQISEQHIREGQERA 151 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 +L EI +L+ LN ++ +EA LT ALKGDNK QGNWGEVVL R+L+ SGLREG+E+ETQ Sbjct: 152 SLKTEILSLKALNQKITEEAAALTNALKGDNKKQGNWGEVVLERILKESGLREGHEFETQ 211 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 +S ++ R QPDV+V LP KDV+ID+K++L AYERYFN EDD + L +H+AS++ Sbjct: 212 MSATSEQGKRFQPDVVVHLPNDKDVIIDSKVSLAAYERYFNCEDDTEKAQHLAQHVASIK 271 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 HI+ LG KDYQ L G++TLDYVL+FIP+EPAFL+A++ +PEL+T AL +NIMLVSPT L Sbjct: 272 GHIKGLGAKDYQTLQGIKTLDYVLLFIPIEPAFLIAVEEEPELVTTALNHNIMLVSPTNL 331 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 LVALRTI N+W+YE+Q++NAQ IAD+A+KLYDK F+ DM +G+S+D A +Y QAM Sbjct: 332 LVALRTINNIWQYEYQNQNAQLIADQAAKLYDKFVGFVTDMEKVGKSMDSAHTSYEQAMN 391 Query: 409 KLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 KL+SGRGN++ Q E FR LGV+ + ++ L + + Sbjct: 392 KLTSGRGNIVRQIEKFRELGVQPSKRMSQHLQQLSQDD 429 >UniRef50_Q1QTA9 Putative uncharacterized protein n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTA9_CHRSD Length = 500 Score = 344 bits (882), Expect = 4e-93, Method: Composition-based stats. Identities = 180/444 (40%), Positives = 273/444 (61%), Gaps = 9/444 (2%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 +A E + A+L AA++Q +++ +CE E+ Q +L + T+ Sbjct: 57 RARLERELAQSDAQLDAAREQGLETQRRLTQCE---RELGDRQEQLATLRERHGRLETQR 113 Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 E H +K+ + + RL++ FE LA RIFE + Q+R+SL +LL+P REQ+ Sbjct: 114 EQEHAHHAEKLALLEEARTRLTQDFEALAGRIFEERQQAFSAQSRESLETLLAPFREQVG 173 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 FR ++++ G+ +ER +L +I +L LN Q+ +EA NLTRALKGD K QG+WGEV+L Sbjct: 174 DFRARLEEIHGQSLRERSSLKTQIEHLATLNRQITEEASNLTRALKGDKKMQGDWGEVML 233 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNA 270 VLE SGLR EY+ +VSIE DA R +PD ++ LP + +++DAK++L AY RY NA Sbjct: 234 ESVLERSGLRRDIEYKREVSIEGDAG-RQRPDAVIYLPDQRHLIVDAKVSLNAYVRYVNA 292 Query: 271 EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPE 330 EDD TR AL+ H+ +VR HI L +DY +LPGL + D+V +F+PVEPAF +A Sbjct: 293 EDDATRAQALRAHVQAVRGHIEALSGRDYPRLPGLNSPDFVFLFMPVEPAFAVAFQHDET 352 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L +A +I++V+PTTLL +LRT+A+LW E Q+ NA+ IA+RA KL DK R F+D + Sbjct: 353 LFHDAFARDIVVVTPTTLLASLRTVASLWTLERQNDNARVIAERAGKLLDKFRGFVDSLE 412 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 +G+ L++A +YRQAM +LS+G+G++++QA + LGV +KR++ L + + Sbjct: 413 EVGRHLERADGSYRQAMGRLSTGQGSLVSQALMLKRLGVRMKRDLPEHLTQGV-----DD 467 Query: 451 RLRSVPEQPNDEAYQRDDEYNQQS 474 +V E + E DD + Sbjct: 468 DSEAVSEDESGEPGGADDARAPGT 491 >UniRef50_B5JQ80 RmuC domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ80_9BACT Length = 453 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 169/431 (39%), Positives = 264/431 (61%), Gaps = 4/431 (0%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL----LNNEVRSLQSI 75 W +Y+ K E+ + EL+AA Q+ + E E E+ L+ Sbjct: 18 WFIQAYRLRTPKGLAEEEKAALEDELAAAAQEKAKLEERSRSLEESFGGAKEELVQLRDE 77 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 NT L L R+ + + ++ ++ +++L+ +FE LA R+ + ++ + +N+ Sbjct: 78 NTGLNRKLAGADERIHSMETRIAEQKAELAELQKKLTAEFETLATRVLDANSEKFAIRNK 137 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +S++ LL+PL E++ FR +V+ + + ++R L +++ L +LN +M+ EA NLT AL Sbjct: 138 ESIDKLLAPLSEKITDFRSRVETTHDQSVKDRAELVAQLKTLGELNQKMSTEAHNLTTAL 197 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 KG KTQGNWGE+VL VLE SGL EG EY TQ S ++ R QPDV++ LP+GK +V+ Sbjct: 198 KGQTKTQGNWGELVLGTVLEKSGLMEGREYLTQASFVSEDGKRQQPDVLIVLPEGKHLVV 257 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 DAK++LVAYER N E + RE+AL++HI SV+NH+ L +K Y L +++ D+VLMF+ Sbjct: 258 DAKVSLVAYERCVNEESETKREAALKDHIQSVKNHVAELSKKRYDALYEIQSPDFVLMFV 317 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 PVEPAF++A+ L A + N++LV+P+TLL LRT+AN+WR E Q+RNA IA R+ Sbjct: 318 PVEPAFIMAIQADDTLFDFAFRQNVVLVTPSTLLATLRTVANIWRQEKQTRNALDIAQRS 377 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 LYDK F +DM IG+ + ++Q Y AM KLS GRGN++ Q ++ + LG + K+ + Sbjct: 378 GALYDKFVGFFEDMKKIGEQIGRSQVAYDSAMNKLSIGRGNLVNQVQSLKELGAKAKKAL 437 Query: 436 NPDLAEQAVSQ 446 + E A + Sbjct: 438 PAETVEGAGEE 448 >UniRef50_A1U2A2 Putative uncharacterized protein n=3 Tax=Marinobacter RepID=A1U2A2_MARAV Length = 548 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 186/446 (41%), Positives = 282/446 (63%), Gaps = 4/446 (0%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 + + A + A S + + +E +L L+ +LRE + Sbjct: 103 RQQSAALENRLAALASELTAKQDRVAQLASESGQYQQRAETLSEELGQLKVELREQQVTL 162 Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 + ++ A +K+ + + L ++FENLANRIFE + R +Q++ SL+SLL+P R+QL Sbjct: 163 DKERRSASEKLELLEKNRDALKQEFENLANRIFEQKSERFSQQSKTSLDSLLNPFRDQLQ 222 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 FR++V+D + E ++R L EI++LQ+LN Q+ +EA NLTRALKGD K QGNWGE++L Sbjct: 223 DFRKRVEDVYTTETRDRQALRSEIKSLQELNRQITEEAANLTRALKGDKKIQGNWGELIL 282 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNA 270 RVLE SGLR+G EYETQ S ++ ++PDVIV LP +++VID+K++LVAY+++ A Sbjct: 283 ERVLERSGLRKGVEYETQGSYRDEDNQLLRPDVIVHLPDQRNLVIDSKVSLVAYQQWVTA 342 Query: 271 EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPE 330 + + R +AL++H+ +VRNHIR L KDY QL GL + D+VL+F+P+EPAF+ A + Sbjct: 343 DQEEERAAALKQHVEAVRNHIRTLSEKDYSQLNGLHSPDFVLLFMPIEPAFVAAFQQDEN 402 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L EA + I++V+PTTLL LRTI N+WRYE QS+NA++IADRA +YDK+R+F++ M Sbjct: 403 LFAEAFERKIIVVTPTTLLATLRTIENIWRYERQSQNARRIADRAGAVYDKLRVFVEAME 462 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ---- 446 +G L AQ Y AM L+ GRGN+++QA F LGV +K+E+ + +QA Sbjct: 463 KLGSQLHTAQGTYDNAMNTLTRGRGNLISQANRFVELGVRVKKELPKSIVDQAEVDSEDA 522 Query: 447 DEEYRLRSVPEQPNDEAYQRDDEYNQ 472 DE ++ +P D R ++ + Sbjct: 523 DEPGDTPAIDRKPTDAGEARAEDQQE 548 >UniRef50_Q2BN95 Putative uncharacterized protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BN95_9GAMM Length = 492 Score = 343 bits (880), Expect = 7e-93, Method: Composition-based stats. Identities = 180/439 (41%), Positives = 285/439 (64%), Gaps = 5/439 (1%) Query: 13 LVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR----AECELLNNE 68 L+ + + + +E+ + +++ E E + L + Sbjct: 53 LLASEQAITLRLNEATEALQQLRSEQHHTELQRERLTERLRGIEPLLTTAVQEKKHLEKK 112 Query: 69 VRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR 128 + + E+ TR+EA ++ DK++ + + ++L E+F+N+ANRIF+ ++ Sbjct: 113 LEQTAFQLADRSEVVAELETRLEAEREAHADKLKTLEQAREQLREEFQNVANRIFDEKSK 172 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + + N+++L LL+PL++QL F+R+V+D + KEA++R L +I +L+ LN QM+++A Sbjct: 173 QFRDSNQENLGQLLNPLKDQLGDFKRKVEDVYDKEAKDRRALHEQINHLRDLNQQMSEDA 232 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 INLT+ALKGD+K QGNWGEV+L R LE SGLR+GYE+E QV++ + R PD ++ LP Sbjct: 233 INLTKALKGDSKAQGNWGEVILERALEESGLRKGYEFELQVAV-TEEGQRYLPDAVIHLP 291 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 GKD+++D+K++L AYERY AED + L+EH+ SVR HI+ L K YQ L +R+L Sbjct: 292 DGKDIIVDSKVSLTAYERYCAAEDPAEKARFLREHLLSVRGHIKGLSEKAYQGLSDIRSL 351 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+VL+FIP+E AFLLAL+++P L EA NIMLVSP TL+V LRTI N+WRYEHQ++NA Sbjct: 352 DFVLLFIPIEGAFLLALEKEPALFKEAFDRNIMLVSPATLMVTLRTIHNIWRYEHQNQNA 411 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 Q+IA R +L+DK F++ + IG++LD+ Q + A K+L+SGRGN+++Q + LG Sbjct: 412 QEIAKRGGELHDKFVGFLESLDDIGRNLDRTQQAFDTAHKRLASGRGNLVSQVAMLQKLG 471 Query: 429 VEIKREINPDLAEQAVSQD 447 E K++I+ +L ++A+ D Sbjct: 472 AEGKKQISKELVDRAIESD 490 >UniRef50_Q2SCG4 Uncharacterized protein conserved in bacteria n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SCG4_HAHCH Length = 507 Score = 343 bits (880), Expect = 8e-93, Method: Composition-based stats. Identities = 187/492 (38%), Positives = 290/492 (58%), Gaps = 29/492 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 + ++ + A+I ++ ++AQ + LA EE+ A ++ + E + Sbjct: 16 IGLAVALLALIGMMRQRRQRRDLELRNAQIIEKLLAREEEVARLQEACAEKTQRCESMQR 75 Query: 61 ECELLNN----------------------------EVRSLQSINTSLEADLREVTTRMEA 92 E +L + L ++ +++L + T Sbjct: 76 EVGVLQQSNAAVRARMESIHERYVQVEAAAKDKDANLSELTQALSAAQSELASLKTAAAK 135 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 Q H +K++ + S + L+++F+ LANRIFE S +++ E ++ +L ++L PL QL+ F Sbjct: 136 EQLHHQEKLKLLEASREALTQEFQLLANRIFESSTQKLSEFSQNNLKTILDPLNTQLNDF 195 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 R++V+D + KEAQ+R +L+ EI+ LQ LN +++ +AI LT ALKGDNK G WGEV+L R Sbjct: 196 RKKVEDVYDKEAQQRFSLSAEIKKLQTLNERISDDAIKLTNALKGDNKAAGTWGEVILER 255 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 +LE SGL +G EYE Q + N+A R+QPDVI+RLP+ K+VV+D+K++LVAYE+Y NA D Sbjct: 256 ILERSGLVKGREYEVQSAQRNEAGRRIQPDVIIRLPENKNVVVDSKVSLVAYEQYHNASD 315 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 D R L++H+ SVR HI+ L K YQ GL +LD+VL+FIP+E AF A+ L Sbjct: 316 DSARIDYLKQHVLSVRQHIKGLSGKRYQDALGLNSLDFVLLFIPIEGAFAAAVQGDQSLF 375 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 EA + N+++VSP+TLL LRTI N+WRYEHQS+NAQ+IA +A LYDK F+ D+ + Sbjct: 376 NEAFQLNVVIVSPSTLLATLRTIHNIWRYEHQSQNAQEIARQAGYLYDKFVNFVQDLEEV 435 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 GQ L + Q Y AM +L++GRGN++ + E + LG ++++ ++A EE Sbjct: 436 GQRLQQTQGAYDTAMGRLATGRGNLITRVEKLKQLGARAGKQLSESTLQRA-QMSEEGDS 494 Query: 453 RSVPEQPNDEAY 464 R+V D A Sbjct: 495 RTVSLSLGDGAG 506 >UniRef50_C9R7J4 DNA recombination protein RmuC n=5 Tax=Pasteurellaceae RepID=C9R7J4_AGGAD Length = 584 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 140/422 (33%), Positives = 242/422 (57%), Gaps = 1/422 (0%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 H+ + A +E + A+ +Q E ++ + +L +T+L +L E+ Sbjct: 153 HSAIAEQITALKERFGVASAQAEGLRSQLEQSQSLISRREEALANLTEKHTALSQELAEL 212 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 T + ++H ++ + ++Q+L+ +F+NLANRI E ++R + N+ S++SLL P R Sbjct: 213 KTTLTEKEKHFAEQQQNFEQTKQQLNTEFQNLANRILEEKSQRFQQTNQASMDSLLKPFR 272 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 EQ++ F+++V + + + L EI+ + ++ M+Q+A NLT ALKG+ KT GNWG Sbjct: 273 EQIESFQKRVNEIHSESVKGNAGLEAEIKKVLEIGLSMSQQANNLTSALKGEKKTLGNWG 332 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E+ L R L+++GL E Y Q +N+ R PD I+ LP K ++ID+KM+L AYE Sbjct: 333 EMQLERALQSAGLLEDQHYTAQAHFKNEEGKRNYPDFILNLPDDKHLIIDSKMSLNAYES 392 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 ++ED+ R++ L EHI ++RNHI L RKDY L G+R+ ++VLMF+ VEPA++ AL Sbjct: 393 AVSSEDEMERQAFLHEHIKALRNHIDDLSRKDYSNLIGVRSPNFVLMFVAVEPAYIEALK 452 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P L N+++VS TTL+ LRT+ANLWR E + A++I+++A +Y+++ L Sbjct: 453 MDPSLFGYGYDKNVIMVSHTTLMPILRTVANLWRVERGNAEAREISEKAGDIYNQICLLA 512 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + ++ +G SL +Y + L +G ++ + E F+ L + + + + Sbjct: 513 ERLAKVGNSLSAVSSHYNSTVTALVGQQG-LMGKVERFKALSAKASKTLPNIEPLHHDFE 571 Query: 447 DE 448 E Sbjct: 572 TE 573 >UniRef50_B5JRK6 DNA recombination protein RmuC n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JRK6_9GAMM Length = 469 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 159/464 (34%), Positives = 276/464 (59%), Gaps = 6/464 (1%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQ----ITQSEHWR 59 ++ A+ +V A+ + + ++++ + + E + Q + Sbjct: 8 LLVGAALSGIVVAALVFWGLQARQSKRERDHTETNNALALENRELTTRCESLQEQVKERE 67 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 E E++ L L+A T + ++ DDKI+ + +++Q+L ++F+NLA Sbjct: 68 QRLEKERAEIKELAERYQDLQAQYTHTKTTLHEKERQFDDKIKLLEDNKQQLKQEFQNLA 127 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 N+IFE + ++ ++QSL++LL P ++QL F+ +V++ +E ++ +LT +I++L++ Sbjct: 128 NKIFEDKGKAFNDLSQQSLDNLLKPFKQQLTDFKTRVENIHHQETTQQASLTEQIKSLRE 187 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 LN ++ +EA NLT ALKG+ KTQGNWGE +L +L+ SGL +Y +VS++ + R Sbjct: 188 LNQKITEEAQNLTTALKGEKKTQGNWGEYILENILDKSGLVRDRDYRREVSLKTEEGQRQ 247 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PD +V LPQ K ++IDAK++L A+ RY +E D R AL H+A++++ ++ L K+Y Sbjct: 248 RPDAVVYLPQSKHLIIDAKVSLNAWTRYIESETDDERRIALNAHVAAIKDRVKELSDKNY 307 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 L GL + + V MF+P+E AF AL +L AL+NN+++ +PTTLL +L ++ LW Sbjct: 308 FDLNGLNSPEVVFMFVPIESAFAAALSHDRDLALNALENNVLIATPTTLLTSLNIVSQLW 367 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R+E Q++++ +A+RA K+YDK+R F+D M +G L AQ +Y AM +L+SGRGN++ Sbjct: 368 RFEDQNKHSALLAERAGKVYDKLRSFVDSMDKLGNQLGSAQKSYDTAMGQLTSGRGNLIK 427 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 QA F LGV ++ E+ +L E+A E + NDE+ Sbjct: 428 QASDFEKLGVSVRAELPRELVEKA--DLELGHEEGGDAEMNDES 469 >UniRef50_Q1MYU2 Putative uncharacterized protein n=1 Tax=Bermanella marisrubri RepID=Q1MYU2_9GAMM Length = 507 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 166/428 (38%), Positives = 266/428 (62%), Gaps = 1/428 (0%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 Q+ Q E + +L + +TQS + + + SL + L+ L Sbjct: 81 HQQNVAQIESLRNELSQAQGQLKHNEAVLTQSAKDAQKLIEKEHRIESLNQEISELKTAL 140 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 ++ E Q+ +K+ + ++++LS++FENL+N+IF+ ++ ++ +++ L+SLL+ Sbjct: 141 KQEQVEREKEQESLHEKLALLEQNKKQLSQEFENLSNKIFDEKYKQFNQTSKEGLSSLLN 200 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P ++QL+G R++V D + E+++R +L +I L +LN Q+ +EA LTRALKG+ KTQG Sbjct: 201 PFKDQLEGLRKKVDDVYVAESKDRASLKAQIGELHKLNRQITEEASALTRALKGEKKTQG 260 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGE+VL VLE SGLR G EY + SI N R +PDVI+ LP+ K +++DAK++LVA Sbjct: 261 NWGELVLETVLEKSGLRAGEEYVREKSI-NTEGDRYRPDVIINLPENKHIIVDAKVSLVA 319 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y Y NAE D R+ L+ H+ +V+ HI+ L K Y QLPG+ + D+V +F+PVEPAF++ Sbjct: 320 YTDYVNAETDDERQQHLKTHVQAVKAHIKALSEKPYDQLPGVNSPDFVFLFMPVEPAFMV 379 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A L EA + I++V+PTTLL +LRT++NLW E Q+++A+Q+A++A K++DK+ Sbjct: 380 AFQYDDSLFNEAFEKRIVVVTPTTLLASLRTVSNLWSIERQNKHAKQLAEQAGKVHDKLV 439 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F++ M +G L Q Y A +L GRGN+L+QA F+ LGV K+E+ + E A Sbjct: 440 GFVESMEKVGAQLTTVQKTYDTAWNQLKEGRGNLLSQAHKFKDLGVRSKKELPKHVMETA 499 Query: 444 VSQDEEYR 451 + E Sbjct: 500 ELEFSEDD 507 >UniRef50_Q9KVQ7 DNA recombination protein rmuC homolog n=150 Tax=Gammaproteobacteria RepID=RMUC_VIBCH Length = 513 Score = 340 bits (873), Expect = 5e-92, Method: Composition-based stats. Identities = 248/500 (49%), Positives = 326/500 (65%), Gaps = 38/500 (7%) Query: 4 SIMVYAVIALVGVAIGWLFASY-----------------QHAQQKAEQLAEREEMVAELS 46 GVAIGW HAQQ + + EL Sbjct: 14 LWSALVSAGATGVAIGWWVKQRYQLKTQLLEQQLEQQSHWHAQQIQQLNEQLTTAQQELD 73 Query: 47 AAK---------------------QQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 +++ E + E + +E+ +++ LE+ LRE Sbjct: 74 ELDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLRE 133 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 R + + +K++ + +E+RL +QFE+LAN++FEH VD QNRQSL LL+PL Sbjct: 134 QEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTPL 193 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 +EQL+GF++QV DSF EA+ERHTL HE+RNLQ+LN QMA+EA+NLT+ALKGDNK QGNW Sbjct: 194 KEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQQGNW 253 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GEVVL RVL SGLREG+EY+TQVS++N+A R QPDVIV LPQ K VVID+KM LVAYE Sbjct: 254 GEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKMALVAYE 313 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 RYF+AE D R+SAL+EH+ ++RNHIR LG+KDY QL G+++LDYVLMFIPVEPAF +A+ Sbjct: 314 RYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVAI 373 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 P L+ +A++ NI+LVSPTTLLVALRTI NLWR E Q++NAQ IA+RASKLYDK+RLF Sbjct: 374 QADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRLF 433 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 ++DM +G +LDKA +Y+ AM KL +GRGN + QAE+F+ LGVEIKR I L E+A Sbjct: 434 VEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPLIERAQQ 493 Query: 446 QDEEYRLRSVPEQPNDEAYQ 465 ++ V P ++ Sbjct: 494 APDQENAPLVERHPIEDKVN 513 >UniRef50_Q30UB0 Putative uncharacterized protein n=1 Tax=Sulfurimonas denitrificans DSM 1251 RepID=Q30UB0_SULDN Length = 407 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 152/389 (39%), Positives = 253/389 (65%), Gaps = 1/389 (0%) Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 W A + L NE+ + + SL +T R+ + +K + +++++ +F+ Sbjct: 19 WLAVIKNLKNELSFEKEKSASLLNQNAVLTERINGINEKNQEKFILLEQNKEQMRLEFKE 78 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 LA I E+++++ QN+++L+ +++P+REQ + F++Q+ D + KEA++R L EI+++ Sbjct: 79 LAQSILENNSQKFSLQNQENLSKMITPMREQFNEFKKQIDDVYIKEAKDRSMLQAEIKSI 138 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND-AR 236 +++N QM+++A NLT+ALKG++K QG WGE+VL VLE SGLR G EYE +V++E++ + Sbjct: 139 KEINHQMSKDAQNLTKALKGESKKQGVWGEMVLESVLEHSGLRVGVEYEREVTLEHEHNQ 198 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 SR +PDVIV LP G+D+++DAK +LVAYE+Y + EDD +E L EHI S++ HI+ L Sbjct: 199 SRYRPDVIVHLPDGRDIIVDAKTSLVAYEQYSSVEDDEHKERFLNEHIISIKKHIKELSE 258 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 KDY L G++TLD+V MF+P+E A L+A++ L A K +++LV PTTL+V+LR + Sbjct: 259 KDYANLKGIKTLDFVFMFVPIESALLMAMEHDKTLFDHAFKKSVILVGPTTLMVSLRAVE 318 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 N WRYE Q +NAQ+IA RA L+DK F++ + +G+ + Q Y + KL +G G+ Sbjct: 319 NSWRYEKQQKNAQEIAKRAGMLFDKFSGFVESIEKLGKQITTVQKTYDETFSKLHTGSGS 378 Query: 417 VLAQAEAFRGLGVEIKREINPDLAEQAVS 445 + +Q + LG + + + L + + Sbjct: 379 ITSQFQKLESLGAQSSKVLPKSLTDASED 407 >UniRef50_Q12LQ0 Putative uncharacterized protein n=22 Tax=Alteromonadales RepID=Q12LQ0_SHEDO Length = 522 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 199/432 (46%), Positives = 297/432 (68%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 ++ E ++A++S + Q ++ + ++ Q + A + + + Sbjct: 80 AQSKIEVLIAQVSKVEAQAERATSLETQLSDTQRKLMESQLALSKSNAMQQTILIKSRTE 139 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 Q+ DKIR + +E RL+ QFENLANRIFE + +QN ++S+L PL++QL+GFR Sbjct: 140 QEALQDKIRLLETAEARLTVQFENLANRIFEERSENFKQQNVSQIDSVLGPLKQQLEGFR 199 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +Q+ +S+ E ER L H++ +L +LN +M+Q+A+NLT ALKGDNK QGNWGEV+L RV Sbjct: 200 QQINESYTHEQSERSALKHQLTHLHELNMKMSQDAVNLTNALKGDNKQQGNWGEVILERV 259 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 L+ SGLREG+EY+TQ +++D R +PDVIV LP+ KDVVIDAKM+L+AYERYFN+ D+ Sbjct: 260 LQESGLREGHEYQTQQELKDDNGKRFKPDVIVHLPEQKDVVIDAKMSLIAYERYFNSSDE 319 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 ++ AL+EH+ S+R HI+ L +KDY +L GL++LDYVLMFIP+EPAFLLA++ P +I Sbjct: 320 SHKQQALKEHVISIRQHIKGLSQKDYHKLHGLKSLDYVLMFIPIEPAFLLAIEHDPSIIN 379 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 AL+ NIMLVSPT LLVALRTI N+WRYE+Q++NAQ IA +A+K+YDK FI+DM +G Sbjct: 380 FALEQNIMLVSPTNLLVALRTINNIWRYEYQNQNAQTIAKQAAKMYDKFCGFIEDMDKVG 439 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 ++L+ A+ +Y+ AM KLSSG+GN++ QA + LGV+ ++++ A+S + Sbjct: 440 RALEGAEKSYQSAMGKLSSGKGNLVRQAHLMQKLGVDTSKQLDKHKVNLALSDHLDDESD 499 Query: 454 SVPEQPNDEAYQ 465 + + + E + Sbjct: 500 TEDDSQDQEPHS 511 >UniRef50_A0YDB3 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YDB3_9GAMM Length = 490 Score = 338 bits (867), Expect = 3e-91, Method: Composition-based stats. Identities = 184/462 (39%), Positives = 293/462 (63%), Gaps = 12/462 (2%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 +++ ++ +A + + I + + + +L+ +++ E Sbjct: 11 LEWLLLAAFGLATIALLISFFIVLRSRRAVARNERDSEQASQQQLAIMREKYLLLEVRSE 70 Query: 61 ECELLNNEVRSLQSINTS----LEADLRE-------VTTRMEAAQQHADDKIRQMINSEQ 109 + + LQ L+A L E + T + QQ ADDK++ + + Q Sbjct: 71 NKAEHISRLNDLQKEREQQIVLLQASLMEQKEASAILRTELAQYQQSADDKVKTLEETRQ 130 Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT 169 +L+ FE LANRIFE + R + ++ SL++ LSPLREQL F+++V+D + K+++ER + Sbjct: 131 QLNRDFELLANRIFEEKSERFNRNSQTSLDTALSPLREQLKDFKQKVEDVYDKDSKERVS 190 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L+ E+ L+QLN QM+ +A+NLT ALKGDNKTQGNWGEV+L RVLE SGL +G EYETQ+ Sbjct: 191 LSAELGQLKQLNQQMSVDALNLTNALKGDNKTQGNWGEVILERVLEESGLHKGREYETQI 250 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 S++++ R QPDVIVRLP+ KD++ID+K++LV YERY N+ +D R+ AL++H+ASV+N Sbjct: 251 SLKSEQG-RGQPDVIVRLPEDKDLIIDSKVSLVHYERYCNSSEDDQRQQALKDHVASVKN 309 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 HIR L +K+Y+ L G+RTLD+VL+FIP+EPAF+ A + + EA + NI++V PTTLL Sbjct: 310 HIRDLSQKNYEGLEGIRTLDFVLIFIPIEPAFMAAFEHDQSMFREAYEKNIIVVGPTTLL 369 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LRTI ++WRYE Q++NA++IA +A ++DK F++DM I + L KA + A+ K Sbjct: 370 ATLRTIQSIWRYERQNKNAEEIARQAGAMHDKFVGFVNDMGKIEEHLSKASQAHEDALNK 429 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 LS G+GN++ + LG ++K+ + + ++ V +++ Sbjct: 430 LSKGKGNLVGSTQRLEKLGAKVKKSMPNSVVDEQVFEEDVSE 471 >UniRef50_A6DJZ5 Putative uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DJZ5_9BACT Length = 475 Score = 337 bits (865), Expect = 4e-91, Method: Composition-based stats. Identities = 168/469 (35%), Positives = 281/469 (59%), Gaps = 19/469 (4%) Query: 3 FSIMVYAVIALVGVAIGWLFAS---------------YQHAQQKAEQLAEREEMVAELSA 47 I+ + ++G AI + A+ AE+ + + E+S Sbjct: 1 MEIVYALLGLIIGAAIMFFLKKDSGTSRELEIELEKLRDQAKSTAEKEEKIQVQQNEIST 60 Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL----REVTTRMEAAQQHADDKIRQ 103 + ++ S E + L + +TS ++ + T+M+A + D+K++ Sbjct: 61 LRAEVASSTSLLNERQKLISRFEDEAQKSTSQLQEIITLNATLKTQMQADRTLHDEKLQS 120 Query: 104 MINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKE 163 + S++ LS F+ +AN+IFE ++ + N++ L+ L PL+EQ+ F +QVQD + KE Sbjct: 121 LKASKEELSRNFKEIANKIFEEQSKNQSQANKEKLDLTLKPLKEQIHTFSKQVQDCYNKE 180 Query: 164 AQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGY 223 A+ER +L EI++L++LN +M+++A+ LT+ALKGD+K +G WGE++L RVLEASGLR G Sbjct: 181 AKERFSLEKEIKSLKELNTRMSEDALQLTKALKGDSKARGTWGELILERVLEASGLRNGS 240 Query: 224 EYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 EY TQV+ + R PD IV LP K ++ID+K++LVAYE+Y ++ D+ R + + H Sbjct: 241 EYFTQVTETAEDGKRYMPDAIVHLPDEKQIIIDSKVSLVAYEKYCSSADEDERLTLRKAH 300 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 + SV+NHI+ L K Y+ LPG+ +LDYVL+F+PVE AF LA++ +L +A K NIMLV Sbjct: 301 LDSVKNHIKELSDKSYENLPGINSLDYVLLFMPVEGAFRLAVEADEKLFLDAYKKNIMLV 360 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SP+TLL+ LRTI+ +W++E+Q+RN Q I D+A LY K +++ +G+ +++A+ Y Sbjct: 361 SPSTLLITLRTISKIWQFENQNRNTQAIVDKAEALYSKFVGYVESFQKVGKGIEQARKAY 420 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 A +L +GRGN++ ++ LG++ K+ + ++ +A L Sbjct: 421 DSAEGQLMTGRGNLIRTCKSLEELGIKSKKAMPKEVLHKADMDFSSPEL 469 >UniRef50_B7S2L4 RmuC domain protein n=5 Tax=Gammaproteobacteria RepID=B7S2L4_9GAMM Length = 486 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 153/481 (31%), Positives = 250/481 (51%), Gaps = 24/481 (4%) Query: 4 SIMVYAVIALVGVAIGWLFASYQHAQQKAEQL----AEREEMVAELSAAKQQITQSEHWR 59 +++ IA G+A+G L + A EE+ EL++A + I+ E R Sbjct: 8 QLIIAGSIAFGGIALGLLIGVIRGQGIAERLRLQMTASNEELQLELASATRVISGLEVER 67 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD--------------DKIRQMI 105 + L ++ ++ + LE DL R +A Q ++ + Sbjct: 68 NQ---LQERLQEGRTALSKLENDLDSHGRRYQALQNEHTRLHTQQEEREEQHQSQMTLLK 124 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 + L ++FE LANRIFE + N++SL SLL P REQ+ GF+ ++ + + + Sbjct: 125 EARDNLKQEFELLANRIFEDKGKSFTSTNKESLESLLKPFREQISGFQSRINEVHTEAVK 184 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 L EI+ + ++ +M +A NL ALKGD KT GNWGE L R LE +GL G Y Sbjct: 185 GNTALEAEIKKVFEIGLEMNSQATNLATALKGDKKTTGNWGEAQLERTLELAGLLPGDHY 244 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 E Q S + R PD I++LP+ K +VID+K++LV Y+R +A + + AL+ H Sbjct: 245 EAQASFTDAQGKRRLPDFIIKLPEKKCLVIDSKVSLVDYDRAISAATEEEQSEALRSHAQ 304 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 +VRNHI L KDY L G+ + D+VLMF+P+EPA++ A+ +L + +++VS Sbjct: 305 AVRNHIDDLSSKDYSNLSGVDSPDFVLMFMPIEPAYIEAMKYNKDLFNYGYQRQVVMVSH 364 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTL+ LRT+ANLW + +R A++I+ RA ++Y+++ L + + +G +L A ++Y Q Sbjct: 365 TTLMPILRTVANLWMIDQSNREAREISTRAGEIYNQVCLVAERLHKLGNTLKSANNHYNQ 424 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQ 465 +K L+ +G ++ + E FR L + + E + E RL +V +D Sbjct: 425 TVKGLAGQQG-LVGKVERFRQLSSNASKSLTE--LEPIHADIELERLEAVELTQDDAEEG 481 Query: 466 R 466 Sbjct: 482 E 482 >UniRef50_A3UAT4 DNA recombination protein RmuC n=5 Tax=Flavobacteriales RepID=A3UAT4_9FLAO Length = 470 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 151/445 (33%), Positives = 268/445 (60%), Gaps = 12/445 (2%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 ++V + AL G +G LFA ++ + + + +L ++ + ++E Sbjct: 38 LLVGLISALSGAYLGNLFARLKNKSETSALQERINQTEHQLERVEESLGRTEV------- 90 Query: 65 LNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFE 124 E ++++S L A ++ + +A ++ ++ +M +++ +++FENLAN+I + Sbjct: 91 ---EKQTIRSEKEQLNATMQVMKVEYDALERKTKEQKGEMEQLQEKFTKEFENLANKILD 147 Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 + + EQN+ +++ +L PL+E+++ F ++V+DS ++ L +I+ L +LN QM Sbjct: 148 EKSTKFTEQNKTNIDIILKPLQEKIEKFEKRVEDSNKEQYGRHSELKEQIKGLSELNQQM 207 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 +++A NLT+ALKGD+K QGNWGE++LTR+LE SGL + EY Q S +N R+Q DV+ Sbjct: 208 SKDADNLTKALKGDSKIQGNWGELILTRILEKSGLEKDREYTVQDSHDNPEGRRLQTDVL 267 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 + LP GK ++ID+K++L +ER+ ++ED+ + L+ HIAS++ H+ L K+YQ L Sbjct: 268 IHLPDGKKMIIDSKVSLTDFERFVSSEDEDDKRRHLKSHIASIKRHVEQLSAKNYQYLID 327 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + D + MFIP+EPAF +A +P L A +++V+P+TLL ALR + NLW+ + Q Sbjct: 328 -ESPDTIFMFIPIEPAFAIASANEPNLYEIAFDKQVIIVTPSTLLAALRLVDNLWQNDRQ 386 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 +NA +IA +A LYD D++ +G+ + Q++Y AMKKL +GRGN++ + E Sbjct: 387 KQNAIEIATQAGALYDSFTNLTDELIKVGKQIGTVQNSYEGAMKKL-TGRGNLIKRVEKL 445 Query: 425 RGLGVEIKREINPDLAEQAVSQDEE 449 + LG + + I+ L +A DE+ Sbjct: 446 KKLGAKASKAIDAKLLSRAEDSDED 470 >UniRef50_C6X215 DNA recombination protein RmuC n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X215_FLAB3 Length = 501 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 154/450 (34%), Positives = 263/450 (58%), Gaps = 11/450 (2%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNN-EVRSLQSINTS 78 +L Q QQ+ E L + +A LSA + + E + ++ ++S Sbjct: 62 FLKTEKQINQQQTELLNTLKNEMATLSAEHATLQNQFREQRELNAKQSLQIDGIRSEKEE 121 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 + E+ E+ QQ ++ ++ ++ +F+NLAN I E +++ + N+++L Sbjct: 122 IFGRNAELAAINESLQQSLKNQKEEIEKIQETAKNEFKNLANEILEEKSKKFTDANKENL 181 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + LL PL E L+ F+++V + + EA+ER +L + I+ + + +++QEA NL ALKG Sbjct: 182 DILLKPLGENLETFKKRVNEVYDNEARERFSLNNTIKLMMEQTTKVSQEANNLATALKGQ 241 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 KTQGNWGE++L R+LE SGL + EY +Q +I+ + +PD +++LP + V+ID+K Sbjct: 242 TKTQGNWGEMILERILEDSGLCKDREYFSQYNIKTETGENQRPDFVLKLPGNQIVIIDSK 301 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 ++L AYER +AE + R+ L HIA+++ HI L K Y L LD+ +MFIPVE Sbjct: 302 VSLNAYERMCSAETEDERKQNLSLHIAAIKKHIDTLALKRYDNL--KEALDFTIMFIPVE 359 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 PAFL A+ +L A +I+L+SPT L+ L+ I+++W+ Q++NA++IA +A+ L Sbjct: 360 PAFLTAVQYDQQLWNYAYHKHIILLSPTNLIAYLKLISDVWKRADQNQNAEEIARQAAAL 419 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 YDK F+ D+ +G+ ++ A+ +Y AMKKLS+G GN++ E R LGV+ K+++ Sbjct: 420 YDKFEGFVSDLLNVGKKMEGAKQDYESAMKKLSTGNGNLVKATEKLRQLGVKPKKQLPNQ 479 Query: 439 LAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 L E+A ++ ++ NDE+ +D Sbjct: 480 LLERANVEEIDF--------ANDESVTEND 501 >UniRef50_B4X023 RmuC domain protein n=2 Tax=Alcanivorax RepID=B4X023_9GAMM Length = 443 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 180/450 (40%), Positives = 272/450 (60%), Gaps = 7/450 (1%) Query: 7 VYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLN 66 + A+ AL G A+ L A ++ A + A ++AE A + + Q + + E Sbjct: 1 MVALAALCGGAVAALLAVLIERRRAAAREAA---LMAEKQALSEPLAQVPLLKQQLEGQQ 57 Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHS 126 R + L A+ + R+ Q +K+ S +L ++FENL+ ++ + Sbjct: 58 QRQRDTDAQLQQLGAEKARLEERLAGQQ----EKLAFSEQSRNQLKQEFENLSGKVLDQR 113 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 +++ EQ++Q L+ +L P REQL FRR+V E + + +L ++ +L+ LN QM + Sbjct: 114 GKQLQEQHQQGLDGMLKPFREQLADFRRRVDQIHSDETRAQASLIEQLGHLKSLNQQMHE 173 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 +A NLT ALKG KTQGNWGE++L RVLE+SGL G EYETQV++++++ R PD IV Sbjct: 174 DARNLTDALKGQAKTQGNWGEMILERVLESSGLTRGREYETQVTLKDESGQRRLPDAIVH 233 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 LP+ KDVVIDAK++LVAYER +A RE AL++H+ S+R+HI+ L KDY L G+R Sbjct: 234 LPENKDVVIDAKVSLVAYERLSSASTSEEREQALRDHLTSLRSHIKGLDTKDYSGLEGIR 293 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 +LD+VL+FIP+E AF++A+++ L T+A NI+LVSPTTLLV LRTI N+WRYE+Q+R Sbjct: 294 SLDFVLLFIPIEGAFMVAMEQDSSLYTDAFARNIVLVSPTTLLVTLRTIQNIWRYEYQNR 353 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 NA IADRA K+ D++ L + M +G + KAQ + K+LS GRGN+ QA+ + Sbjct: 354 NALDIADRAGKICDQVSLIGESMDDLGDKIGKAQLAWDTTFKRLSRGRGNLYRQAQQLKD 413 Query: 427 LGVEIKREINPDLAEQAVSQDEEYRLRSVP 456 LG + +R + E + + Sbjct: 414 LGAKARRALPEPGDEHDDGATVTDQSGAKE 443 >UniRef50_B8KUF2 ATP-dependent protease ATP-binding subunit n=1 Tax=gamma proteobacterium NOR51-B RepID=B8KUF2_9GAMM Length = 462 Score = 333 bits (855), Expect = 7e-90, Method: Composition-based stats. Identities = 142/463 (30%), Positives = 247/463 (53%), Gaps = 9/463 (1%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 I+ ++ L ++ + + A ++ A A+Q+ R E Sbjct: 7 LPIIGALLVGLTAGSVATYLLLRGTLTRHTQDAARLQQERAIAVDAEQRA------RKEI 60 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L + + A+LR R E ++ +++ Q S L ++FE L+ I Sbjct: 61 SELGAALSTKTKEAADAMAELRAAQARQEERDRNHQEQLAQFEASRALLKQEFEVLSQTI 120 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 ++ + + NR+S+ +LL+PL +Q+ F++ V + G+ + +L+ +++ L+ ++ Sbjct: 121 LKNKEQELKAGNRESIGALLNPLEKQIQNFQQNVNELRGEFLKSNTSLSEQLKALEGVSL 180 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 M+ EA +LTRALKGDNK GNWGE L + L+ +GL G +ETQ + ++ ++ PD Sbjct: 181 SMSAEANSLTRALKGDNKIAGNWGETQLEKTLQLAGLNPGEHFETQAAFKDVEGRKLIPD 240 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 +VRLP+ K++VIDAK++LV YER +AE D RE+AL H S+RNHI L KDY L Sbjct: 241 FVVRLPKDKNLVIDAKVSLVDYERAISAETDVEREAALAAHGRSMRNHIDGLSSKDYANL 300 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 PG+ + D+VLMF+ VEPA++ A+ + +L + N+++VS TTL+ LRT+ANLW E Sbjct: 301 PGMASPDFVLMFVSVEPAYIEAMRQNRDLFNYGYQKNVIMVSHTTLMPILRTVANLWMIE 360 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + AQ+I+DRA ++++ + + + +G SL A ++Y + + L +G + + + Sbjct: 361 RSNAEAQEISDRAGEIFNAVCTVAERLEGLGGSLQAASNHYNKTVTALIGRQG-LHGKVD 419 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRLRS--VPEQPNDEA 463 F+ L + + L D + P +P +E Sbjct: 420 RFQSLSAKANKTFPESLQPIGTENDAPRLGATFDAPPKPPEEP 462 >UniRef50_Q0F138 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F138_9PROT Length = 483 Score = 333 bits (854), Expect = 8e-90, Method: Composition-based stats. Identities = 151/433 (34%), Positives = 244/433 (56%) Query: 19 GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS 78 Q E R + + + + L N+ Sbjct: 46 VAAERQALIESQSREITDYRVASASISERLENSEALRAALESRLAEKEAALGELAERNSR 105 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 EA + E+ + ++ A +K+ + ++ +L +F+ LAN+IFE + EQNR S+ Sbjct: 106 QEAHIAELNIAITKDREAAAEKLALLEEAKTKLGHEFKLLANQIFEERGKTFSEQNRSSI 165 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + +L P+REQ+ FR++V + +A++R +L + L++LN QM+++AI LT ALKG Sbjct: 166 DEVLKPMREQMGEFRKRVDEVHLNDAKDRASLREHLNQLEKLNRQMSEDAIGLTHALKGQ 225 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 +K QGNWGE++L R+LE SGLREG E+ + S + R++PDV+V +P K V+ID+K Sbjct: 226 SKAQGNWGEMILERILETSGLREGKEFAREQSFTGEDGRRLRPDVVVYMPGDKQVIIDSK 285 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 ++L YER +AEDD R+ AL H+ S+++HI+ L K+Y LP + T DYVLMF+P+E Sbjct: 286 VSLTDYERAVSAEDDDKRKLALTAHVRSLKSHIQGLSSKNYNHLPNVHTPDYVLMFVPIE 345 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 A+L+A++ P + A + + +V+P+TL L+ I LWRYE QS N ++ DRA KL Sbjct: 346 GAYLMAIEADPGVFEAAFEQRVAVVTPSTLYATLKLIEQLWRYERQSENVVKLVDRAGKL 405 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 +DKM FI+ IG L++A+ Y ++ ++ +G GNV+ Q L + ++E+ Sbjct: 406 HDKMVSFIESFEEIGARLEQARSAYDTSLNRIRTGPGNVINQIATLGKLAGKTRKELPKH 465 Query: 439 LAEQAVSQDEEYR 451 L E A D+ Sbjct: 466 LTESAALSDQSGD 478 >UniRef50_Q9CLG7 DNA recombination protein rmuC homolog n=30 Tax=Pasteurellaceae RepID=RMUC_PASMU Length = 509 Score = 332 bits (852), Expect = 1e-89, Method: Composition-based stats. Identities = 153/448 (34%), Positives = 252/448 (56%), Gaps = 3/448 (0%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 +H + A +E + A+ Q EH +A E + L + T+L +L Sbjct: 65 QARHNDIAEKITALKERFGIASAQAESLAKQLEHSQANFTRKEQENQELMAKLTTLSQEL 124 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 E+ T + ++H ++ + + S+Q+LS +F+NLANRI + +R + N+ +L+SLL Sbjct: 125 TELKTTLSEKEKHFAEQQQHIEQSKQQLSTEFQNLANRILDEKSRSFSQSNQTALDSLLK 184 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P REQ++GF+++V + + + L EI+ + ++ M+Q+A NLT ALKG+ KT G Sbjct: 185 PFREQIEGFQKRVNEIHSESVKGNAGLEAEIKKVLEIGLNMSQQADNLTSALKGEKKTLG 244 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 NWGEV L R L+ +GL EG Y Q +++ PD ++ LP K ++ID+KM+LVA Sbjct: 245 NWGEVQLERALQLAGLLEGEHYSAQAHLKDGEGKHNYPDFVLNLPDNKHLIIDSKMSLVA 304 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 YE NAEDD R++ L+EHI +++NHI L RKDY L G+R+ ++VLMFI VEPA++ Sbjct: 305 YESAVNAEDDLKRQNKLREHIKAIKNHIDDLSRKDYSNLIGMRSPNFVLMFIAVEPAYIE 364 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A+ P L + N++LVS TTL+ LRT+ANLWR E + A++I+ RA +Y+++ Sbjct: 365 AMKMDPTLFNYGYEKNVILVSHTTLMPILRTVANLWRIERGNAEAKEISARAGDIYNQIC 424 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 + + + +G +L A +Y + L +G ++ + E F+ L + + + E Sbjct: 425 VIAERLGKLGNTLSSASSHYNSTVTALVGQQG-LVGKVERFKDLSAKANKTMPN--VELL 481 Query: 444 VSQDEEYRLRSVPEQPNDEAYQRDDEYN 471 E RL + + Q+D+ Sbjct: 482 HHAVESERLDVIKADTPEAQPQKDNTAQ 509 >UniRef50_B9Z0V3 Putative uncharacterized protein n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z0V3_9NEIS Length = 531 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 179/430 (41%), Positives = 271/430 (63%), Gaps = 6/430 (1%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + + + E + ++L+A +Q Q E + + L T L A +E Sbjct: 102 ERERAIEQLTRELRDTASQLAARAEQGRQLEASQLQVIKERELATRLAEDITRLTAREQE 161 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + T ++ +Q +K+ + +++ LS QF+ LA+ I E +RR EQN+++L SLL+PL Sbjct: 162 LVTTLDKERQQTREKLVLLDEAKEALSNQFKALASEILEEKSRRFTEQNKENLGSLLTPL 221 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG-DNKTQGN 204 E++ F + VQD++ K+++ER TL E+R LQ+LN ++ +A+ LT AL G ++K QG Sbjct: 222 HERIQNFGKLVQDTYDKDSKERLTLEQELRRLQELNTRLNHDAVALTNALTGANSKAQGT 281 Query: 205 WGEVVLTRVLEASGLREGYEYETQVS----IENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 WGE+VL +VLE SGL + EY QVS E+ + R QPDV++ LP+GK +V+D+K++ Sbjct: 282 WGEMVLEKVLETSGLHKDREYRVQVSDTVETEDGSSRRYQPDVVIDLPEGKQLVVDSKVS 341 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY RY A DD RE+ L+ HIA++R HIR L K YQ L L TLD+V MF+PVEPA Sbjct: 342 LNAYVRYTAAGDDVLREAELKAHIAAIRAHIRTLSEKRYQDLYKLNTLDFVFMFVPVEPA 401 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 +LLA+ L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ+IA ++ +YD Sbjct: 402 YLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQEIARQSGAMYD 461 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL- 439 K F+D M +G+ LD +D + AMKKL SGRGN+++ AE R LG++ +++ L Sbjct: 462 KFVGFVDSMEKLGKQLDTTRDTFGDAMKKLQSGRGNLISSAEKLRKLGIKSNKQLASHLA 521 Query: 440 AEQAVSQDEE 449 E + DEE Sbjct: 522 LESSDEADEE 531 >UniRef50_C1F7P6 RmuC domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F7P6_ACIC5 Length = 505 Score = 332 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 170/505 (33%), Positives = 286/505 (56%), Gaps = 36/505 (7%) Query: 1 MDFSIMVYAVIAL-VGVAIGWLFASYQHA-------------------------QQKAEQ 34 M +V+ V AL G+A+G F S A QQ AE Sbjct: 1 MPLVAIVFVVAALGAGIAVGAWFGSRLAASERRAEKAQSEAALQAAQAQLDPARQQAAEL 60 Query: 35 LAEREEMVAELSAAKQQITQ-------SEHWRAECELLNNEVRSLQSINTSLEADLREVT 87 EE+ A+++ A+ + + RA + + L+ ++ +A++ + Sbjct: 61 ALLTEELRAQVAEARDKAARAETEAARLPDLRAALDASEEDKARLRQELSAAQAEMARLG 120 Query: 88 TRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLRE 147 T++ + +A +K++ ++ + + L+ QF+ LA I E ++ EQN+ +L LL+P+RE Sbjct: 121 TQLRNERDNAQEKLQMLMGAREELTNQFKTLAQSILEEKSKVFTEQNQANLGQLLTPIRE 180 Query: 148 QLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGE 207 + F+++V + + + L +I+ L LN Q+++EA +L ALKG +KTQG+WGE Sbjct: 181 KFTEFQQKVTELRDQGIKSSAELGQQIKGLSDLNQQLSKEANSLVEALKGSSKTQGDWGE 240 Query: 208 VVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERY 267 +L ++LE++GL++ +Y Q S + +R QPDVIV LP+GK +++D+K++L Y Y Sbjct: 241 FILEQILESAGLQKDRQYRVQESFTREDGTRAQPDVIVSLPEGKHLIVDSKVSLRDYSDY 300 Query: 268 FNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 AE+D E++L H+A++ HI+ L R++Y L GLR++D+V+MF+P+EPA++LAL Sbjct: 301 CAAEEDAAHEASLARHLAAIHAHIKELSRRNYHTLYGLRSIDFVVMFVPIEPAYMLALAH 360 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 L +A + N++LV P+TLL +RT+A LWR E Q+RN Q+I R +LYDK+ F Sbjct: 361 DSSLWQKAWEQNVLLVGPSTLLFVVRTVAQLWRQEDQTRNVQEIVRRGGELYDKLSAFAK 420 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 D++ +G++LD A+ +Y +A KKL+ GRGN + QAE R LGV+ +++ +L E A + Sbjct: 421 DLTDVGKNLDAARASYDEAYKKLAQGRGNAIRQAELLRQLGVKATKKLPGELVEMARGEH 480 Query: 448 EEYRLRSVP---EQPNDEAYQRDDE 469 + DE D E Sbjct: 481 GAAEMEGGQLSLAAAADEESSEDGE 505 >UniRef50_B0TZE2 RmuC family protein n=18 Tax=Francisella RepID=B0TZE2_FRAP2 Length = 472 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 163/423 (38%), Positives = 260/423 (61%), Gaps = 2/423 (0%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 +++ +E L + + + + E + + S + + + + Sbjct: 51 RSKELTFDTLLDQEKQKNLELKQDNTLRIDELKQELKEEREKSYSYIEEIKNYRSQVSML 110 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 T+++ DK+ + NSE +L +FENLAN+IFE +++++ E+N++SLNS+L+P+R Sbjct: 111 ETQLKEQNVAMKDKLELLQNSEAKLKTEFENLANKIFEDNSKKLSERNQESLNSVLNPVR 170 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 EQL F+++V+D + KE+ R L +E++ L++LN +M EA NLT AL+ K QG WG Sbjct: 171 EQLKDFKQKVEDVYDKESTARGALQNELKTLKELNQKMTAEAHNLTNALRSSTKQQGIWG 230 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E+VL VLE SGLREG+EY + +D +PDV+V+LP +D++IDAK +L AY Sbjct: 231 EMVLENVLEKSGLREGFEYFREKHTTDDEGKAYRPDVVVKLPDSRDIIIDAKTSLFAYND 290 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 Y A D+ +++ L+ HI S+R+HI+ L K+Y+ L G+ +LD++ MFIP+E A LLALD Sbjct: 291 YMAA-DEEQKQTHLKAHIKSIRDHIKGLANKNYENLKGINSLDFIFMFIPIEGALLLALD 349 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 L EA K I+LVSPTTLLVALR + N WRYE Q+++ I RA +LY K F+ Sbjct: 350 NDTNLYDEAFKQKIILVSPTTLLVALRAVENTWRYEKQAQSITDIYSRAEELYKKFVGFV 409 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG-VEIKREINPDLAEQAVS 445 +D+ +G+S+ A +Y A KL +GRGN++ Q E + + ++ K+E+ +L E A+ Sbjct: 410 EDLEKVGKSIADANKSYENAFSKLKTGRGNLIGQVEKLKVISNIKPKKELESNLVENAMG 469 Query: 446 QDE 448 +E Sbjct: 470 DNE 472 >UniRef50_B3PJ77 RmuC domain protein family n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJ77_CELJU Length = 493 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 163/419 (38%), Positives = 266/419 (63%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + +L +++ A L +++ Q + + LE + +R E +++ ++ Sbjct: 75 LQNKLMQLTEELAGQREKAARLPALEADLQGKQQLLSELEQTHAALVSRTEQERRNFAEQ 134 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 + + ++ L+ +FENLA +IFE ++ ++ L++ L PLR QL FR++V+D + Sbjct: 135 LALLQSARTDLTREFENLAGKIFEAKQQQFQHNSKSLLDTTLDPLRSQLTEFRKKVEDVY 194 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 KE+ ER+ L ++ LQ+ ++ ++AI+L +ALKG++KTQGNWGEVVL R+LE SGL+ Sbjct: 195 EKESAERNRLAGQVLELQKQAQKIGEDAISLAQALKGNSKTQGNWGEVVLERLLEESGLQ 254 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 +G EY+ QV+ SR PDVIV LP+ KD+VIDAK +L YE+Y + ED+ +R+ L Sbjct: 255 KGREYDAQVNFTATDGSRRMPDVIVHLPEQKDIVIDAKCSLSDYEKYCSTEDESSRKQYL 314 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 HI S+RNHI+ L KDY+++ G+++LD+V +FIP+E AF+LAL P L EA +I Sbjct: 315 AAHIQSLRNHIKQLSIKDYEKIDGIKSLDFVFIFIPIEAAFMLALQEDPGLYREAYDRHI 374 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 +LVSPTTLL LRT+ N+WRYE Q++NA++IA A L+D+ L +D + ++G L K Q Sbjct: 375 ILVSPTTLLATLRTVENIWRYEKQNKNAERIAREAGALHDQFVLMLDALDSVGNQLHKTQ 434 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQP 459 + Y +A ++L+SGRGN++ + + R LG + K+ I+ + E+A + + L + Sbjct: 435 EAYAKARERLASGRGNLIKRVDDIRRLGAKTKKVISGTVLEEAGVESVDLLLDDTSDTE 493 >UniRef50_Q1YTF2 Putative uncharacterized protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTF2_9GAMM Length = 450 Score = 329 bits (844), Expect = 1e-88, Method: Composition-based stats. Identities = 168/420 (40%), Positives = 273/420 (65%), Gaps = 6/420 (1%) Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 + + + + L E + L+ + L + ++ + Q H ++I + ++++ LS Sbjct: 37 REQFATQQQLDKLIVEQQQLEEVRRDLLTLNSGLEQKLLSQQNHYQEQIALLADAKKTLS 96 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 +FENLANRIF+ + Q+++++ LSPLR + FR+QV+ ++ KE ER+ L Sbjct: 97 SEFENLANRIFDEKQTKFSLQSKEAMEVTLSPLRRDIGDFRKQVESAYEKENAERNKLVG 156 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 +I LQ+ Q++ +A++L AL+GDNK QGNWGE +L ++LE SGL G EY TQV+++ Sbjct: 157 QISELQKQTMQVSADAVSLATALRGDNKAQGNWGEFILEKLLEDSGLSNGREYSTQVALK 216 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 ++ R PDVIV LP+G+D+VIDAK++LV YERYF+AED+ +++ L++H++S+R HI+ Sbjct: 217 DETGKRRNPDVIVHLPEGRDIVIDAKVSLVDYERYFHAEDEESKKLCLRQHLSSLRAHIK 276 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L KDY++L G+ +LD+VL+F+P+E AF+LALD PE++ +A I+LVSP+TL+V L Sbjct: 277 GLSSKDYEKLEGVNSLDFVLIFVPIESAFMLALDHDPEMMRDAYDRGIILVSPSTLMVTL 336 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 RTI NLWRY Q+ NAQ IAD+A LYD+ L+I+ + +G+ ++K+Q+ + A K+LSS Sbjct: 337 RTIKNLWRYADQNLNAQLIADKAGGLYDQFVLYIESLDEVGKHIEKSQEAWDTAHKRLSS 396 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 GRGN++ + E + LG + K+ + ++ D + L V + EA E + Sbjct: 397 GRGNLIRRTEELKKLGAKAKKSLPDNML------DADPLLPLVANKVVGEADSNKPENKE 450 >UniRef50_A6VZC3 Putative uncharacterized protein n=2 Tax=Marinomonas RepID=A6VZC3_MARMS Length = 437 Score = 329 bits (843), Expect = 1e-88, Method: Composition-based stats. Identities = 156/407 (38%), Positives = 244/407 (59%) Query: 45 LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM 104 + +Q E + + E L + + LE + + + AAQ +K Sbjct: 31 QAMRRQWQHTQEKMQLQNEELKRLLEQSKDQIHYLEKESLTLEQQFAAAQSVWQEKEAFY 90 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 +++ +F+ +A+ I ++ ++N + L SLL+PL Q+ F+ V+ S+ +EA Sbjct: 91 REQKKQNETEFKQMAHEIMSQQGLQLAKENERQLGSLLTPLGSQIQKFQESVEKSYQEEA 150 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 +ER +L EI+ LQ LN +++ +A++LT ALKG NK QG WGEV+L R+LE SGL +G E Sbjct: 151 RERFSLVKEIKGLQLLNQKISDDAVSLTHALKGQNKLQGGWGEVILERILERSGLEKGRE 210 Query: 225 YETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHI 284 YETQ S + R+QPDV++ LP+GK +++D+KM L++Y Y AE D R AL++H+ Sbjct: 211 YETQASYQTAEGRRLQPDVVIHLPEGKQIIVDSKMVLISYLAYMEAETDEDRNRALKQHL 270 Query: 285 ASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVS 344 +VR H++ L K Y LPG+ +LD+VL+FIP+E AF LAL L +EA ++NI++V Sbjct: 271 DAVRRHMKELSAKSYHDLPGVTSLDFVLLFIPIEAAFGLALQGDNGLFSEAFEHNIIIVG 330 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 P+ LL LRTI N+WR E QS+NA +IA +A +YDK F+ DM IG L+ + Sbjct: 331 PSNLLATLRTIQNIWRNEKQSQNAIEIARQAGAMYDKFSGFVQDMDDIGSKLEAVSRTHD 390 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 A+KKL++GRGN++A+AE + +G + + + + V DE Sbjct: 391 SALKKLTAGRGNLVARAEKLKLMGAKTSKALPVEYLSDDVFTDEPNE 437 >UniRef50_A8ES75 DNA recombination protein RmuC-like protein n=1 Tax=Arcobacter butzleri RM4018 RepID=A8ES75_ARCB4 Length = 399 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 160/371 (43%), Positives = 243/371 (65%), Gaps = 4/371 (1%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 + Q+I S + + + +++ +KI + N++Q++ +FENLAN++F+ ++ Sbjct: 29 QKYQNIINSYLLKISTLEELSKVEKENLKEKINFLENNKQQMKLEFENLANKLFDEKEKK 88 Query: 130 VDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAI 189 + +L +LS +EQLD F ++V D + E ++R +L EI+NL++LN Q++ +AI Sbjct: 89 ----STTNLTFVLSSFKEQLDSFSKRVNDIYNDETKQRSSLLTEIKNLKELNNQISNDAI 144 Query: 190 NLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQ 249 NLT+ALKG NKTQG+WGE++L+ +L+ +GLREG EY Q S + R++PDVIV LP Sbjct: 145 NLTKALKGQNKTQGDWGEMILSSILDQTGLREGKEYTIQGSFTSAEGKRLRPDVIVHLPS 204 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 KD+VID+K++L AY Y AE++ ++ A +E + S+ +HI+ L K Y+ + G+RTLD Sbjct: 205 NKDIVIDSKVSLNAYINYSKAENEDEKQQASKELVKSITSHIKDLSSKSYENIDGVRTLD 264 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +VLMFIP+E AFLLA L A NNIMLVSP+TL V LRTI N+WR EHQ+ NAQ Sbjct: 265 FVLMFIPIEGAFLLATSSDDNLFKLAFDNNIMLVSPSTLYVTLRTIENIWRNEHQNENAQ 324 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 I+ +A+ LYDK F+ D+ IG ++ + Q Y AM KLSSG GN++ + E F LGV Sbjct: 325 LISKKAADLYDKFVAFVGDIEDIGTNITRTQKAYDGAMNKLSSGNGNLIRRTEEFLELGV 384 Query: 430 EIKREINPDLA 440 + K+++ Sbjct: 385 KPKKQLPNRYL 395 >UniRef50_A0M0B0 DNA recombination protein RmuC n=10 Tax=Bacteroidetes RepID=A0M0B0_GRAFK Length = 476 Score = 328 bits (842), Expect = 2e-88, Method: Composition-based stats. Identities = 144/453 (31%), Positives = 259/453 (57%), Gaps = 13/453 (2%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE- 61 +++ V VGV IG L + + + + ++ ++ K Q+ + E Sbjct: 6 LISLIFLVALGVGVYIGKLISGLRSKSETGILEEKNNQLSFQIDELKNQLNSNLEKNKED 65 Query: 62 -----------CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 E + NE ++ ++ L + + Q+ +++ ++ +++ Sbjct: 66 IRQLKNEAHTDIEKIENEREEIRREKENISLQLTRKISEFDNLQERNEEQKAEVEKLQEK 125 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 +++FENLAN+I + + + N+Q++ ++L PL++++ F +V S + + L Sbjct: 126 FTKEFENLANKILDQKSEKFTSLNKQNIENILDPLQKKIKDFEEKVTRSDSESIKRHAEL 185 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 +++ L + + +++++A NLT+ALKGD K QGNWGE+VL RVLE SGL++ EY Q S Sbjct: 186 GEKLKFLNEQSLKISEDATNLTKALKGDTKMQGNWGEMVLERVLERSGLQKDSEYFVQQS 245 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 + R+ PDVI+ LP K +V+D+K++L AYERY N ++ + + L+ H+ SVRN Sbjct: 246 FNTEEGKRVMPDVIIHLPGDKKMVVDSKVSLNAYERYINEPEEDQKITHLKNHLISVRNR 305 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 + LG K+Y L + + D+VL+FIP+E AF +A + P L ++A + NI++V+PTTLL Sbjct: 306 VNELGNKNYHSLYQMESPDFVLLFIPIEAAFAIASNEYPSLYSDAFEKNIIIVTPTTLLA 365 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L+TI ++W+ E Q +NA QIA +A LYD D++ IG+ + Q++Y AMKKL Sbjct: 366 VLKTIDSMWQNEKQKQNAIQIATQAGALYDSFTNLTDELLKIGRQIGTVQNSYEGAMKKL 425 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 +G+GN++ + E + LG + ++++ L +A Sbjct: 426 -TGKGNLIRRVEKLKKLGAKASKQLDQKLINRA 457 >UniRef50_A2SP89 Putative uncharacterized protein n=5 Tax=cellular organisms RepID=A2SP89_METPP Length = 640 Score = 328 bits (841), Expect = 2e-88, Method: Composition-based stats. Identities = 184/435 (42%), Positives = 281/435 (64%), Gaps = 1/435 (0%) Query: 27 HAQQKAEQLAEREEMVAEL-SAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 Q AE L + + + +AE L +L + + A+L E Sbjct: 190 FKDQLAELREAAGREAGRLMAELLAEREAHDKAKAELTGLKTAKDTLDAKVVEMTAELTE 249 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + TR E +QHA++K+ ++N++ LSEQF NLAN I E ++R EQN+ SL LL PL Sbjct: 250 LRTRSEQDRQHAEEKLELLVNAKNALSEQFRNLANDILEDKSKRFAEQNQASLGQLLEPL 309 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 R QL F+ +V++ + +E ++R L +++ L +LN ++Q+A NLT+ALKG KTQGNW Sbjct: 310 RNQLSEFKGKVEEVYVQEGKDRSALAQQVKQLVELNQTLSQDAKNLTQALKGQAKTQGNW 369 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE++L RVLEASGLR+G+EY+ Q S SR+QPDV++ LP+ + +V+DAK++LVAY+ Sbjct: 370 GELILERVLEASGLRKGFEYKVQDSQTLADGSRLQPDVVIELPEDRKLVVDAKVSLVAYD 429 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 RY +AE D +R +A+++H+ SVR HI+ L K YQ+L G+++ D+VL F+PVEPAF+LA+ Sbjct: 430 RYVSAETDESRSAAVKQHLGSVRAHIKSLSDKRYQELYGMQSPDFVLAFVPVEPAFMLAV 489 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 EL +A +++LVSP+TLL +RT+A+LW+ E QSRNAQ IA R ++LYDK+ F Sbjct: 490 THDSELFMDAWNRSVLLVSPSTLLFVVRTVAHLWKQEFQSRNAQDIAKRGAELYDKLCGF 549 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 + D+ +G+ L++A+ Y +A KLS+GRGN + QAE + LGV + + L + A S Sbjct: 550 VGDLQKVGERLEQAKTAYDEAQSKLSTGRGNAIRQAEMLKKLGVRPSKALPAALVQDAGS 609 Query: 446 QDEEYRLRSVPEQPN 460 +EE + ++ Sbjct: 610 DEEEIVVPALAALTA 624 >UniRef50_B0MWK3 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWK3_9BACT Length = 436 Score = 327 bits (837), Expect = 7e-88, Method: Composition-based stats. Identities = 146/415 (35%), Positives = 236/415 (56%), Gaps = 5/415 (1%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 + + E +AA + +E R E + + + +L R+EAA+ Sbjct: 27 RRDNARLSDERAAADEARRLAEESRRVSE---EKSAAAEIEIRTLVERSTLAQARLEAAE 83 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 Q + + E+ QF+NLAN I +R E NR++L+ LL P R+ + FR Sbjct: 84 QRMAEARAEREKMEETFRTQFKNLANDILGEQSRTFKETNREALDVLLKPFRDNIVEFRE 143 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 +V+ + E ++R L +E+ L +LN ++ E NLT ALKG++K QG+WGE++L +L Sbjct: 144 RVEKIYSSENEQRGALRNELERLMELNRRITTETTNLTNALKGNSKVQGDWGEMILETIL 203 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 + S L G Y+TQ++I+++A + ++PDV++ LP+GK +VID+K++L A+ Y AED+ Sbjct: 204 DNSNLIRGVHYDTQLNIKDEAGNNLRPDVVLYLPEGKRIVIDSKVSLTAFVGYVGAEDEA 263 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 TR L H+ASVR H+ LGRK+YQ+L + D+V+MFIP EPAFL AL + + Sbjct: 264 TRRQYLASHVASVRQHVVELGRKEYQRLLD--SPDFVIMFIPNEPAFLAALQNDSSIWAD 321 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A +++ SPT L L+ + +LW+ Q++N I +KLY+++ F + +GQ Sbjct: 322 AYDKKVIISSPTNLFALLKLVDDLWKRNAQNKNTADIVTYGTKLYEQLVAFTASLEGVGQ 381 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 SLD A+D Y A K+L +G N++ E R LG+ K++ + + A DEE Sbjct: 382 SLDAARDKYNDAYKRLCTGNDNIVRCGERLRKLGIPTKKQQSARTLQAADLPDEE 436 >UniRef50_C4I883 DNA recombination protein RmuC n=2 Tax=Betaproteobacteria RepID=C4I883_BURPS Length = 654 Score = 326 bits (836), Expect = 1e-87, Method: Composition-based stats. Identities = 184/430 (42%), Positives = 278/430 (64%), Gaps = 2/430 (0%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHW-RAECELLNNEVRSLQSINTSLEADLREVTT 88 Q E +LSA + Q+ R E + + +S T L +L E+ T Sbjct: 200 QLTELRESSGRQNGKLSAELEAEKQAAALVRGELVDAKSARAAAESEVTRLTDELTEIRT 259 Query: 89 RMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 R EA +Q+A++K+ ++ +++ LS QF+ LA I E ++R EQN+ SL LL PL+ + Sbjct: 260 RTEAERQNAEEKLNLLLQAKEALSNQFKTLATEILEEKSKRFAEQNQTSLGLLLEPLKTR 319 Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 L F+ +V++ + +E ++R L+ ++R L +LN ++Q+A NLT ALKG KTQGNWGE+ Sbjct: 320 LTEFQGKVEEVYVQEGKDRSALSAQVRQLVELNQALSQDAKNLTLALKGSTKTQGNWGEL 379 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 +L RVLEASGLR+G EY Q + + SR QPDV++ LP+ + +V+D+K++L+AYERY Sbjct: 380 ILERVLEASGLRKGDEYHVQDNRVREDGSRAQPDVVINLPEERKLVVDSKVSLLAYERYA 439 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 +AE D R AL++HI S+RNHI+ L K YQ L G ++LD+VL F+P+EPAF+LA+ Sbjct: 440 SAETDEERLIALRQHIDSIRNHIKSLSDKQYQALYG-KSLDFVLAFVPIEPAFMLAVTND 498 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 EL +A + N++LVSP+TLL +RT+A+LWR E QSRNAQ IA R ++LYDK+ F++D Sbjct: 499 NELFMDAWRRNVLLVSPSTLLFVVRTVAHLWRQEAQSRNAQDIARRGAELYDKLCGFVED 558 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 + +G L +A+ Y A KL+ GRGNV+ QAE R +GV+ + + LA+ A S+D+ Sbjct: 559 LQLVGNRLGQARKAYDSAHSKLAIGRGNVIRQAEMLRDMGVKPSKALPRSLADIASSEDD 618 Query: 449 EYRLRSVPEQ 458 + S + Sbjct: 619 AILIPSASVE 628 >UniRef50_A6EDJ6 DNA recombination protein rmuC n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDJ6_9SPHI Length = 435 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 149/414 (35%), Positives = 255/414 (61%), Gaps = 1/414 (0%) Query: 33 EQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEA 92 + +++ + EL A+ Q + ++ + + L +E+ L++ + + + A Sbjct: 22 RKQPNQQQPLLELKEAEHQKS-LAWFKEDKQRLEDELNDLRNSFIQERGKVIKAEEMLHA 80 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 +Q ++ + +QR +FEN+AN++ E + EQNR +++++L PL+E + F Sbjct: 81 QRQRQAEQELYIAELQQRFKVEFENIANKVLEEKTAKFTEQNRSNMDTILHPLKENIRAF 140 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 +V+ + E+ ER+ L I L + Q+ +EA NL+RALKGD K QGNWGEV+L R Sbjct: 141 EEKVEKVYKAESDERNVLKGVITQLMTQSKQIQEEANNLSRALKGDTKKQGNWGEVILER 200 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 VLE SGL + EY Q S+ +RMQPDVI+ LP K +++DAK++LVAYER+ NA Sbjct: 201 VLERSGLVKDREYRIQTSLTASGGTRMQPDVIIDLPDDKHLIVDAKVSLVAYERFVNAAT 260 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 D RE+ +++H+ S++ HI+ L K+YQ+L + + D+VL+FIP+E +F +A+ + EL Sbjct: 261 DEERETHVKQHLLSIKTHIQGLSGKNYQELYQINSPDFVLLFIPIESSFGIAVQQDAELF 320 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A + +++VSP+TLL LRTI++LW+ E Q+RN +IA + +YDK F+ DM +I Sbjct: 321 NYAWERKVVMVSPSTLLATLRTISSLWKQERQNRNVLEIARLSGSMYDKFVGFLQDMESI 380 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 G+++ ++QD Y +A+ KLS+G GN+ + +E + LG + ++I+ + + Sbjct: 381 GRNIRQSQDAYDKALNKLSTGAGNLSSTSEKIKKLGAKATKQIDTRFLDSGIED 434 >UniRef50_Q21KA3 Putative uncharacterized protein n=2 Tax=Alteromonadales RepID=Q21KA3_SACD2 Length = 494 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 166/484 (34%), Positives = 275/484 (56%), Gaps = 11/484 (2%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQ-----------QKAEQLAEREEMVAELSAAKQQ 51 ++ +++ALV + A + ++ A+ AE+++ A L + Sbjct: 10 LPALIVSILALVACVAFLISARKRLSEVLEAKRTGEDLASAQLRAEQDKGAAALRELELS 69 Query: 52 ITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRL 111 + + +E++ + ++ R + + + + + ++Q L Sbjct: 70 QAKLQADLNAALRTISELKVENQDLHKTREEYLQLQVRYQEQSEKRVTEQKLLEETKQAL 129 Query: 112 SEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 ++FE A ++F+ R + N++ L +LL P REQ+ F ++V+D + KE +R+ L Sbjct: 130 FKEFELAAGKLFDEKKERFESSNKEGLQALLQPFREQITAFNKRVEDVYDKENTQRNQLV 189 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 +I LQ+ Q++ EA NL ALK DNK QG+WGE+VL R+LE SGL++G EY+TQ S Sbjct: 190 GQIIELQKQTQQISAEANNLAAALKNDNKIQGSWGEIVLERLLEQSGLQKGREYDTQKSF 249 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 + SR +PDVIV LP KD+VID+K++LV YERY +AE+ +E AL+ H+ SVR H+ Sbjct: 250 SSADGSRFRPDVIVHLPDEKDIVIDSKVSLVDYERYCSAENQAEKEIALKAHVDSVRAHV 309 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + L K Y+ L G+RTLD+V +F+PVE A+++A+ P L EA NI++VSP++L+VA Sbjct: 310 KGLSLKQYENLEGIRTLDFVFVFVPVEAAYIVAIQSSPTLFKEAYDRNIVIVSPSSLMVA 369 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LRT+ +WRYE Q+ NA+QIA A KLYD+ LF+D + +G++LD+ QD + +A K+L+ Sbjct: 370 LRTVETIWRYEKQNANAEQIAASAGKLYDQFALFVDSLEEVGKNLDRTQDAFGKAKKRLT 429 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYN 471 GRGN+L + + + LG + R + +D E + + +D E + Sbjct: 430 EGRGNLLRKIDGLKELGAKTSRRLPEAYRVDQDDEDTESSGQKKAVKGQIGLLVKDTEAS 489 Query: 472 QQSR 475 + Sbjct: 490 TEGE 493 >UniRef50_A9A093 Putative uncharacterized protein n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A9A093_DESOH Length = 456 Score = 323 bits (829), Expect = 6e-87, Method: Composition-based stats. Identities = 129/453 (28%), Positives = 220/453 (48%), Gaps = 19/453 (4%) Query: 1 MDFSIMVY--AVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M ++Y A AL G+ WL + A + + + + + T+ + Sbjct: 1 MHIPEIIYSAAAGALAGIFFTWLVMRARRA-------VLADRLASATTEIETTRTERDAL 53 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFEN 117 R E + L+S +E+ +AA Q D + + ++ + SEQF + Sbjct: 54 RGELSDHSARFARLESALEQEREKSKEMAAFAQAATQTLKDTFKGLSADTLAQSSEQFLH 113 Query: 118 LANRIFEH---SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI 174 LA FE Q ++++ ++ P++E LD QV + Q +LT + Sbjct: 114 LAKSAFESFHVKASGDLAQRQKAVEEIVRPVKEALDKVNTQVAEVEKSRKQAYGSLTATV 173 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +L + +++ E NL AL+ +G WGE+ L RV+E +G+ ++ Q S++ + Sbjct: 174 ESLLRGQKELSTETGNLVSALR-KPMVRGRWGEIQLRRVVEFAGMLPHCDFVEQSSVKTE 232 Query: 235 ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 + ++PD++VRLP GK VV+D+K L AY +AED+ TR+ + +H +R HI+ L Sbjct: 233 TGT-LRPDMLVRLPGGKLVVVDSKAPLEAYLSAVSAEDEATRKKFMADHTRHLRTHIQQL 291 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K Y + + D+V++F+P EP F AL++ LI A+ I+L SPTTL+ L+ Sbjct: 292 SDKAYWEQFD-QAPDFVVLFLPGEPFFSAALEQDEGLIEFAVARRIILASPTTLITLLQA 350 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 ++ W+ E + NA+ I + + LY ++ D +G+SLD+A +Y A+ L + Sbjct: 351 VSYGWQQEQIAENARHIQELGADLYRRISKMADHFGTVGKSLDRAVKSYNDAVGSLEA-- 408 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 VL A F L IK EI VS+D Sbjct: 409 -RVLPAARRFSELDTSIKNEIPKIEPVNVVSRD 440 >UniRef50_Q1Q4J9 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q4J9_9BACT Length = 550 Score = 321 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 133/438 (30%), Positives = 253/438 (57%), Gaps = 13/438 (2%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQ-----------SEHWRAECELLNNEVR 70 + ++ AEQ + E+++ KQ+I + + + + + + Sbjct: 96 LRIAELSKVMAEQTTLNTSLQNEINSLKQKIAEGNATNNSLKENLKSQKELNQKQADALV 155 Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 L T + A+ +T + A + + ++ ++ QFE +AN+I E + + Sbjct: 156 QLSDKITKITAENSTLTAKNSALTEKLSTQKEEITKMQETSHLQFEKMANQILEEKSGKF 215 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 E N+ ++ +LL PL E +D F+++V++++ KE+++R +L +++ L + +++ EA N Sbjct: 216 TETNKTNIEALLKPLGENIDNFKKKVEETYDKESKQRFSLEEKVKELVEQTNKVSSEANN 275 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L ALKG K QGNWGE++L +L+ SGL + EY Q +I+++ + ++PDV+V+LP Sbjct: 276 LATALKGQAKKQGNWGEMILESILQKSGLVKDREYFLQQTIKDEGGNSLRPDVMVKLPDN 335 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 + ++ID+K++LV+Y+R+ +AE + L EH+ S+ HI L K Y L G +LD+ Sbjct: 336 RVIIIDSKVSLVSYDRFSSAETTDEQTIHLAEHLKSIYGHIDDLHGKKYDALEG--SLDF 393 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 +MF+P+EPA+L+++ + +L T A + I+L+SPT L+ L+ +A+LW+ E QS+NA + Sbjct: 394 TMMFVPIEPAYLISIQKDQDLWTYAYEKRILLISPTNLIACLKLMADLWKREMQSKNAME 453 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 I R LY+K F+ + +G+ ++K+Q +Y A+ +L+SG GN++ QA + LG++ Sbjct: 454 IVRRGDLLYEKFVTFVSTLEDVGKHINKSQQSYNAAIGQLNSGSGNLIGQALKLKNLGLK 513 Query: 431 IKREINPDLAEQAVSQDE 448 +EI + ++ Sbjct: 514 SNKEIPAAMLPTDFEPEQ 531 >UniRef50_A7GVT5 RmuC domain protein n=1 Tax=Campylobacter curvus 525.92 RepID=A7GVT5_CAMC5 Length = 530 Score = 320 bits (821), Expect = 5e-86, Method: Composition-based stats. Identities = 148/436 (33%), Positives = 247/436 (56%), Gaps = 2/436 (0%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 + Q + + E+ + + ++ Q+ ++L + ++ S + LE Sbjct: 97 LKVANIQSQKSVEDLKGELESVRATLNEKQEQNAKLDENLKILTARLEAMGSQKSELEKS 156 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + + + A +Q+ + + +Q L+ +F+NLAN+IFE ++ ++ SL LL Sbjct: 157 IEVQKSDLNAKEQNLRAQEENLAQLKQSLNLEFQNLANKIFEEKTSSFNKTSQTSLELLL 216 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 PLREQ+ GF+ +V + + + +L +I+ + + M++EA +LT ALKG+NK Sbjct: 217 KPLREQIAGFQNRVNEVHSEAVKSSVSLEEQIKQVLNIGLNMSKEAHSLTTALKGNNKIA 276 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 GNWGE L R LE +GL +G Y TQ + ++++ R PD I+RLP K +VID+K++L Sbjct: 277 GNWGEAQLERTLEFAGLIKGEHYFTQQNFKSESGDRAVPDFIIRLPDEKHIVIDSKVSLN 336 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AYE +A D+ +AL EH+ SVR HI L +KDY L GL++ D+VLMF+PVEPA++ Sbjct: 337 AYEEAVSAGDEAKASAALSEHVRSVRRHIDELAKKDYASLDGLKSPDFVLMFMPVEPAYI 396 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 A+ L + ++LVS TTL+ LRTIANLWR E ++ AQQIA RA ++Y+K+ Sbjct: 397 EAMKFDTGLFNYGYERKVVLVSHTTLMPILRTIANLWRIERGNQEAQQIAARAGEIYNKV 456 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 D ++ +G +L+ A ++Y QA+ L +G +L + E F+ L + + P++AE Sbjct: 457 CGVADALARLGGTLNTASNHYNQAVTSLVGKQG-LLGKVERFKQLSSKAIQN-EPEIAEL 514 Query: 443 AVSQDEEYRLRSVPEQ 458 V + P++ Sbjct: 515 NVKFEANRLEDLKPQE 530 >UniRef50_Q7NV71 Probable periplasmic protein n=5 Tax=Proteobacteria RepID=Q7NV71_CHRVO Length = 493 Score = 318 bits (815), Expect = 3e-85, Method: Composition-based stats. Identities = 175/447 (39%), Positives = 269/447 (60%), Gaps = 8/447 (1%) Query: 18 IGWLFASYQHAQQKAEQLAEREEM----VAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 +G A Q + +QL ERE+ E Q+ E E L Sbjct: 47 LGAYIARAQRVPELEKQLQEREQALDASQREARGLASQLAAREEQGRVLEALEARSLQQG 106 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 L A +E+ T+++ ++ + +K+ ++ + Q LS+QF+ LA+ I E ++R EQ Sbjct: 107 QDIMRLTAREQELATQLDNERRQSQEKLALLMEARQTLSDQFKALASDILEEKSKRFTEQ 166 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 N+ +L +LL+PL E++ F + VQD++ K+++ER TL E++ LQ+LN ++ +A+ LT Sbjct: 167 NQNNLGALLNPLHERIQNFGKLVQDTYDKDSKERLTLEAELKRLQELNTRLGDDAVALTN 226 Query: 194 ALKG-DNKTQGNWGEVVLTRVLEASGLREGYEYETQVS---IENDARSRMQPDVIVRLPQ 249 AL G +K QG WGE+VL +VLE SGL + EY QVS +D R QPDV++ LP+ Sbjct: 227 ALTGASSKAQGTWGEMVLEKVLETSGLTKDREYRVQVSDILETDDGGKRYQPDVVIDLPE 286 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 GK +V+D+K++L AY RY A+ + RE+ L+ HIA++R HIR L K YQ L L TLD Sbjct: 287 GKQLVVDSKVSLNAYVRYTAADGEEAREAELKGHIAAIRAHIRTLSDKRYQDLYKLNTLD 346 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V MFIPVEPA+LLA+ L EA + IM+V P+TLL LRT+A++WRYE+Q++NAQ Sbjct: 347 FVFMFIPVEPAYLLAVQHDMSLFNEAFERRIMIVGPSTLLATLRTVASIWRYEYQNQNAQ 406 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +IA + +YDK F+ +M +G+ LD ++D + AMK+LSSGRGN++ AE R LG+ Sbjct: 407 EIARQGGAMYDKFVGFVANMEKLGKQLDTSRDTFSDAMKQLSSGRGNLMTSAEKLRKLGI 466 Query: 430 EIKREINPDLAEQAVSQDEEYRLRSVP 456 +++ L ++ ++ Sbjct: 467 RNNKQLPSQLRLESDEGEDADEAPGEE 493 >UniRef50_Q9JWG3 DNA recombination protein rmuC homolog n=21 Tax=Neisseria RepID=RMUC_NEIMA Length = 594 Score = 317 bits (813), Expect = 4e-85, Method: Composition-based stats. Identities = 183/444 (41%), Positives = 267/444 (60%), Gaps = 7/444 (1%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + Q + + ++ +AA++QI + AE E L LQ L + Sbjct: 153 ESRQTVRDVQNDLADVGNRFAAAEKQIAHLQEKEAEAERLRQSHTELQEKAQGLAVENER 212 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + T++E + +++K+ + + + LS+QF+NLAN I E +RR EQNR+ L+ +L+PL Sbjct: 213 LATQIEQERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPL 272 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG-DNKTQGN 204 E++ GF V+ ++ KE++ER TL +E++ LQ LNAQ+ EA LT AL G NK QGN Sbjct: 273 NERIQGFGELVKQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGN 332 Query: 205 WGEVVLTRVLEASGLREGYEYETQV----SIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 WGE++L VLE SGL++G EY Q E+ R+QPDV+V LP K +VID+K++ Sbjct: 333 WGEMILETVLENSGLQKGREYVVQAASVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS 392 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY RY A D T L H+AS+R H++ L KDY L G+ TLD+V MFIPVEPA Sbjct: 393 LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVEPA 452 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 +LLAL L E IMLV P+TLL LRT+AN+WR E Q++NA IAD KLYD Sbjct: 453 YLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGGKLYD 512 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 K F+ + ++G+ +D+AQ++++ A K+L+ GRGN++ +AE R LGV+ +++ DL Sbjct: 513 KFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQLARDLT 572 Query: 441 EQAVSQDEEYRLRSVPEQPNDEAY 464 E+A S+ DEA Sbjct: 573 ERANETTALSE--SLEYVAEDEAV 594 Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 18/192 (9%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 ++++ + GV WL + + A+ A+ E A +Q + +E Sbjct: 4 MTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAARCDFVEQAHAEI---ASEL 60 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR------QMINSEQRLSEQFE 116 +L+ + R LQ N +L ++ Q+ + +R ++ Q L+ + E Sbjct: 61 AVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLKQSYIELQEKAQGLAVENE 120 Query: 117 NLANRIFEHSNR-----RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 LA ++ + ++ Q RQ + + L R+ + + + D Sbjct: 121 RLATQLGQERKAFADQYALERQIRQRIETDLEESRQTVRDVQNDLADV----GNRFAAAE 176 Query: 172 HEIRNLQQLNAQ 183 +I +LQ+ A+ Sbjct: 177 KQIAHLQEKEAE 188 >UniRef50_C5PMI0 DNA recombination protein rmuC n=3 Tax=Sphingobacteriaceae RepID=C5PMI0_9SPHI Length = 442 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 148/442 (33%), Positives = 259/442 (58%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 M+ +IAL+ + + LF + K + R + + + E+ E Sbjct: 1 MEWMLVTIIALLAIVLVVLFLKRKEGSGKEDYEQLRHQKDEMALELARSQQREENLIGER 60 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L E+ +S + L ++A Q+ + + +++ ++++ + +F+++AN+I Sbjct: 61 ADLKEELEKERSERLKSDRALETAHAYLQAQQEKLEGQKKEIEETKKQFNLEFQHIANQI 120 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 E ++ E N S+ LL PL+E++ F +V+ ++ E+ ER+ L + L Q + Sbjct: 121 LEEKTKKFTETNHNSITLLLDPLKEKIKTFEEKVEKTYQHESAERNVLKGVVEQLMQQSM 180 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 Q+ EA NLTRALKGD+K QGNWGEV+L RVLE SGL + E+ Q S+ ++ R+QPD Sbjct: 181 QIRNEANNLTRALKGDSKKQGNWGEVILERVLERSGLLKDQEFRLQASVTDEDGKRLQPD 240 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 I+ LP K +++DAK++LVAYE++ NAE + ++ ++HI SV NH+R L K+Y +L Sbjct: 241 AIIDLPDDKHLIVDAKISLVAYEKWVNAESEEEQKIFARQHIQSVENHVRELSAKNYHEL 300 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 +++ D+VL+F+P+E A +++ +P+L ++A +++VSP+TLL LRTIA++W+ E Sbjct: 301 YRIQSPDFVLLFMPIESALSMSVREKPDLFSDAWDRKVVIVSPSTLLATLRTIASMWKQE 360 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 Q+RN +IA A LYDK F+ DM + L +A + +++A KKL +G GN++ + E Sbjct: 361 RQTRNVLEIAREAGALYDKFVGFLQDMQQVEGQLQRAMERHQEATKKLGTGAGNIIRRVE 420 Query: 423 AFRGLGVEIKREINPDLAEQAV 444 R LG + ++I+ ++ Sbjct: 421 NLRELGAKANKQIDRKYLDEEE 442 >UniRef50_Q5HB78 DNA recombination protein RmuC n=10 Tax=Anaplasmataceae RepID=Q5HB78_EHRRW Length = 436 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 137/435 (31%), Positives = 249/435 (57%), Gaps = 11/435 (2%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 I+V L+ + + A + ++ + + E + ++ E Sbjct: 2 ILIIVCVFECLIVALVSYFIALKTRISKFDYRILNINKNMLE--------ERIKNLEIEN 53 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L + L ++++ + E+ + + + + +++ FENLANRI Sbjct: 54 SQLKDRNDILNVELCNVKSKITEIEYEKKNLENTVNLYKSEFSTIDEKYKLCFENLANRI 113 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 FE + ++ ++++L+++L+PL+E ++ F+++V+DSF QE+ L EI+ + N Sbjct: 114 FEEKTDKFNKISQENLSNILNPLQEHINLFKKKVEDSFNIHNQEQFLLKKEIQRIVLANE 173 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV---SIENDARSRM 239 ++ +A NL LKGD K QGNWGE++L ++LE SGLR+ +Y +++++ ++ Sbjct: 174 KITLQAENLANVLKGDIKIQGNWGEMILEKILENSGLRKNQDYVLHATGLNLKDNEGNKQ 233 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 QPD I+ LP+ K ++ID+K++L+ YE+YF + + ++ + L++ IAS+R+H+ +L K Y Sbjct: 234 QPDAIINLPENKHLIIDSKVSLIHYEKYFVTKSEESKNNLLKQFIASIRSHVNVLSCKKY 293 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 Q + L+T D+VLMFIP+E A+ LA+ L A I++V P+TLL L+TI +LW Sbjct: 294 QDIEKLKTPDFVLMFIPIEGAYSLAMQEDLMLHNYAWNKKIVIVCPSTLLATLKTIESLW 353 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E+Q+RN +IA + LYDK+ FI DM +G+ + + Y AMKKLS G GN+L+ Sbjct: 354 KLEYQNRNTMEIARQGGALYDKIIGFISDMQKLGKQMGILHNVYNDAMKKLSEGHGNILS 413 Query: 420 QAEAFRGLGVEIKRE 434 + E + LG++ ++ Sbjct: 414 RTENLKLLGIKTSKK 428 >UniRef50_A0Z617 Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z617_9GAMM Length = 564 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 139/450 (30%), Positives = 230/450 (51%), Gaps = 1/450 (0%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 + Q AE E + + + + + + L +E + L Sbjct: 88 IEKNRLGAQLAESNDELLILRQGQAELSAAQARILGLQRDLDELKSERQLLLEKLEKQTT 147 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 + + T E +++ + + NS + LS+QFENLAN++FE ++ + N +L L Sbjct: 148 EAAVLVTEREQQEENLRVQKEFLKNSSESLSQQFENLANKVFEQKGKQFADANHTTLGGL 207 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L PL+EQ+ GF+ +V + + +L I ++ L ++ Q+A NLT ALKGD++ Sbjct: 208 LKPLQEQIAGFQSRVNEVHDASTKNHTSLQQAIDGVKDLGLKIGQDASNLTTALKGDSQQ 267 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGE L R LE SGL EG Y Q S + A + D +VRLP+ + ++ID+K+TL Sbjct: 268 RGAWGEAQLQRTLEISGLIEGDHYTMQDSFSDGAGKIKRTDFLVRLPENRQLIIDSKVTL 327 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 AYER AE + A+ EH+ +VR HI L KDY L G+++ YVLMF+P+E A+ Sbjct: 328 NAYERTIAAETPEEYKRAMTEHVHAVRKHIDDLASKDYTNLTGMKSPSYVLMFMPMESAY 387 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 + AL EL I+LVS TTL+ LRT+ANLW E + A++I+D A+ +Y+K Sbjct: 388 IEALKHNKELFQYGFSKQIVLVSHTTLIPILRTVANLWMLERSNAEAKEISDMAADIYNK 447 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + + + ++G SL ++Y +A+ L+ +G + + + FR + +I +E+ Sbjct: 448 VAGVAEGLRSLGGSLTTVGNHYNKAVVALAGKQG-LFGKVDKFRKISTKISKELPDLEPR 506 Query: 442 QAVSQDEEYRLRSVPEQPNDEAYQRDDEYN 471 + L + E D + + Sbjct: 507 DFDLETSRLELVVESIEEPIEDPIEDPDLS 536 >UniRef50_Q7MRC3 Putative uncharacterized protein n=1 Tax=Wolinella succinogenes RepID=Q7MRC3_WOLSU Length = 445 Score = 317 bits (811), Expect = 8e-85, Method: Composition-based stats. Identities = 157/406 (38%), Positives = 255/406 (62%), Gaps = 4/406 (0%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 R E++++ Q + E LL + Q A + + T ++ Sbjct: 39 LQRTRNELLSQKLQNDLSQQQLSTLKEEKRLLEGRLEERQKEENRYIAQISSLETTLQKE 98 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 ++ +K R + +++RL +F LA + E R+ ++ ++L +L PL EQ+ FR Sbjct: 99 REMLLEKERFLTQTQERLKLEFGELAQKFLEEKGERLGQKQNETLGLILKPLSEQIKTFR 158 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 ++V+++ KE + R L +EI+NL+ LN ++++EA++L +ALKG++KTQG+WGE++L ++ Sbjct: 159 QKVEETHAKEMEGRAVLENEIKNLKALNLKISEEALHLAQALKGESKTQGSWGEMILEKI 218 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 LE SGL +G EYE Q S +++ ++PDVIV LP+ +DVVID+K +L AYER+ +++ Sbjct: 219 LEDSGLSKGREYEVQTSFKSEEGRLLRPDVIVHLPENRDVVIDSKASLTAYERFIHSQQP 278 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 + EHI S++NH++ L K Y L R+LD+VLMFIP+E AF+ AL P L Sbjct: 279 QD----IAEHIRSIKNHLKELSSKSYDSLLKERSLDFVLMFIPIEGAFIEALRHDPRLFV 334 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 EA + NI+LVSP+TLLV LRTI ++WRYE QS+NA++IA A +YDK+ F +D IG Sbjct: 335 EAYEKNIILVSPSTLLVTLRTIHHIWRYERQSQNAEEIAREAGSMYDKLVGFTEDFLKIG 394 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 + ++K++ Y +A+ KL G+GN++ +AE R LGV+ K+ ++ L Sbjct: 395 EQIEKSEKIYSEALAKLKEGKGNLIRRAERLRELGVKSKKSLDSRL 440 >UniRef50_D1YX61 Putative uncharacterized protein n=1 Tax=Methanocella paludicola SANAE RepID=D1YX61_METPS Length = 520 Score = 317 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 119/458 (25%), Positives = 232/458 (50%), Gaps = 24/458 (5%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 Q + A+ + + SAA+++ + + + ++ LQ+ NT + Sbjct: 67 QLSQARSEAAQLREQVRAESDKRSAAEEKNNRIPELDSTIRAKDITIKDLQAQNTENQKQ 126 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD----------- 131 + + T +E ++ ++K+ + ++Q+LS+ F L+ +++N+ Sbjct: 127 IEHLNTTLEKERKSTEEKLALLNEAQQKLSDAFNALSAEALKNNNQSFLDLAKTTLENYQ 186 Query: 132 -------EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 E ++++N +++PL+E LD ++Q+ + L +++ L Q + Sbjct: 187 NGAKVDLEVRQKAINDMVTPLKESLDKVDVKIQEMEKERVSAYTELKEQVKTLSQTELLL 246 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 E NL +AL+ + +G WGE+ L RV+E SG+ +++ QV + N++ ++PD+I Sbjct: 247 QSETSNLVKALRAPS-VRGQWGEIQLKRVVELSGMVNYCDFKEQVPLRNES-CNIRPDMI 304 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 + LP K++++D+K L AY A+DD + L +H + V+ HI L K Y Q Sbjct: 305 IYLPNRKNIIVDSKAPLYAYIDAIEAKDDDIKNEKLIDHASQVKKHITQLSDKSYWQQFN 364 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 T ++V+MF+P E F AL++ P LI ++ N++L +PTTL+ L+ +A WR E Sbjct: 365 -DTPEFVVMFLPGETFFSAALEKDPTLIEFGVERNVILATPTTLIALLKAVAYGWRQEQI 423 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + NA++I + +LY+++ F D+MS +G+ L KA ++Y A+ + S +L A F Sbjct: 424 AENAEEIKNLGKELYNRIITFNDNMSEVGKGLKKAVNSYNSAVGSMES---RLLVSARRF 480 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 + LG+ ++I+ L + +D PN + Sbjct: 481 KELGISTDKDIDSPLILEQSVRDLALGNGEKESGPNGD 518 >UniRef50_A6QAC5 DNA recombination protein n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6QAC5_SULNB Length = 515 Score = 315 bits (807), Expect = 2e-84, Method: Composition-based stats. Identities = 159/417 (38%), Positives = 261/417 (62%), Gaps = 4/417 (0%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSE----HWRAECELLNNEVRSLQSINTSLEAD 82 +Q A + + ELS + Q+ E + E + L LQ N + + Sbjct: 94 KTEQVATLQTKNSVLEKELSQTETQLENLEKMYENLLKEHKELQGRFEHLQEENNRFQVN 153 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + ++E +HA K+ M ++ L +FE LA +IF+ ++ + E ++Q+L+S++ Sbjct: 154 NARLLMKLETESRHASSKLEMMQEHKKELKTEFERLAKQIFDGNSEKFAEFSKQNLDSMI 213 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 PL+ Q++ F++QV D++ E+Q+R L +EI +L++LN +++ +AINLT ALKG++K Q Sbjct: 214 KPLQTQIEEFKKQVSDTYNAESQDRAVLKNEINSLKELNEKISTDAINLTNALKGESKQQ 273 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE+VL VLEASGLR+G+E+E +VS+ D ++PDVIV LP +D++IDAK +L+ Sbjct: 274 GVWGEMVLEHVLEASGLRKGHEFEREVSLRTDDNEVLRPDVIVHLPDNRDLIIDAKTSLI 333 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 +YER+ NAED+ + L H+ S++ HI L K+Y++L + TLD++ MF+P+E A Sbjct: 334 SYERFINAEDEANKAKHLAAHLNSIKMHIEELSNKNYERLKEVNTLDFIFMFMPIEGALA 393 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 +AL+ + A K I+LV PTTLLVA+R + N+W+YE Q++NAQ+IA RA +YDK Sbjct: 394 VALEHDNSIYDNAFKKKILLVGPTTLLVAMRAVENVWKYERQNQNAQEIARRAGAMYDKF 453 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 F +D+ I + +D Q ++ A KLS G+GN++ Q + + LG + ++I +L Sbjct: 454 VRFSEDLIKISKQIDAIQSSFSAAKNKLSDGKGNLVRQVQQLKELGAQTNKQIPKEL 510 >UniRef50_B3ETS9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ETS9_AMOA5 Length = 427 Score = 315 bits (806), Expect = 3e-84, Method: Composition-based stats. Identities = 150/404 (37%), Positives = 249/404 (61%), Gaps = 3/404 (0%) Query: 41 MVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK 100 + + + + Q++ ++ E +L+ + Q+ L L ++ T ++ Sbjct: 25 LKVQTKSLQTQLSGTQQQLEETKLV---LSQAQAQELQLSTQLAKLETINNNLATQLTEQ 81 Query: 101 IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 +++ E++LS QF+NLAN + E +++ QN+++L +LL PL E++ F +QV+ + Sbjct: 82 KQEVNKMEEKLSIQFKNLANELLEEKSKKFTAQNKENLEALLKPLGERIQAFEKQVEQTN 141 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 ++ + L EI L LN Q+ +EA NL +A+KGD KTQGNWGE +L +LE SGL Sbjct: 142 KEDLERNVALRTEITRLYTLNMQITKEAENLAKAIKGDTKTQGNWGEFILESILEKSGLI 201 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 + EY Q S + R QPDV+++LP K +++DAK++L+ YE++FN E + + L Sbjct: 202 KDREYVIQASFVTEEGKRYQPDVVIKLPTEKHLIVDAKVSLINYEQFFNTEQEEEKVQQL 261 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 ++H++SVR HI L K+YQ L+ LD+V+MFIP+EPAF L + + +EA + NI Sbjct: 262 KKHLSSVRRHISSLSEKNYQAEYSLQGLDFVIMFIPIEPAFSLVVQHDHAIFSEAYEKNI 321 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 ++VSP+TL+ LRTI+N+W+ E+Q++NA +IA ++ LYDK FI+D+ IG+ LD Q Sbjct: 322 IIVSPSTLIATLRTISNIWKQEYQNQNALEIAQQSGALYDKFVGFIEDLKQIGRQLDITQ 381 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 +Y +AMKKL G+GN++ + E + LG + I+ L ++A Sbjct: 382 KSYVEAMKKLYDGKGNLVTRVEKIKSLGARATKAIDQQLLDRAE 425 >UniRef50_UPI0000E0F9EE RmuC n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E0F9EE Length = 423 Score = 314 bits (805), Expect = 4e-84, Method: Composition-based stats. Identities = 158/376 (42%), Positives = 247/376 (65%) Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 + +N ++ SLQ NT + ++ +++ QQ + +K+ M +EQ+LS++FE LAN+I Sbjct: 48 QTMNAQLTSLQEANTEYKVANGALSASLQSLQQSSKEKMAIMQQAEQQLSDKFERLANQI 107 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 FE ++ N+QS++ ++ PL+ +LD F+ Q+ +E ER L EI +L+ LN Sbjct: 108 FEQKTKQFSHVNQQSMHQVVQPLQAKLDEFKHQISQQSRQEGLERAALKQEIHSLKTLNE 167 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 + +A+ LT ALKGDNK QGNWGEVVL +L GL EG E+ QVSI +D +QPD Sbjct: 168 TINVQALALTEALKGDNKQQGNWGEVVLESILSNCGLTEGQEFIRQVSIRDDQGRLLQPD 227 Query: 243 VIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQL 302 ++V LP K V+ID+K++L AYER F A DD TR S + H+ S+R H++ L +KDY + Sbjct: 228 IVVNLPNNKAVIIDSKVSLTAYERMFKATDDSTRASYCKAHLQSIRQHVKGLSQKDYSRA 287 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 G+ +LDYVL+F+ E AF AL+ P LI +AL+ NIMLVSP+ L++AL+TI N+W+ E Sbjct: 288 YGIESLDYVLLFLASEAAFQTALNEDPNLINDALQQNIMLVSPSNLMIALKTINNIWQTE 347 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + +Q+IA++A+KL+DK+ F+ +M IG+ ++ Q+ Y AMKKLS+GRG++++ Sbjct: 348 KRINMSQEIAEQATKLHDKLAGFVQEMEKIGKQINMTQNTYENAMKKLSTGRGSIVSMGN 407 Query: 423 AFRGLGVEIKREINPD 438 +GV+ + + + Sbjct: 408 KLEAMGVKTFKHLPKE 423 >UniRef50_Q1VZP5 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VZP5_9FLAO Length = 441 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 136/396 (34%), Positives = 231/396 (58%), Gaps = 1/396 (0%) Query: 46 SAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMI 105 + +++ + + E L E++S ++ ++ L T +E ++ +M Sbjct: 45 ESVRREQKSKDEFITANEKLRAELKSEENERFQIQNKLTRKETELEGLVSKWREQKSEMQ 104 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 +++ SE+FENLA RI E + + QN++++ +L PL+E+L F +++ + + Sbjct: 105 ALQKKFSEEFENLAQRILEQKSEKFTLQNQKNIAHILDPLKEKLTSFETKIEKTNSDFLK 164 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 L +++ L + N ++++EA NLT ALKG +KTQGNWGE++L +VLE SGL +G EY Sbjct: 165 GHIQLEQQLKYLNEQNLKISEEANNLTNALKGSSKTQGNWGEMILEKVLEKSGLTKGREY 224 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 + Q +++ PDV+V LP K ++ID+K++L AYERY N++D+ + L+ H+ Sbjct: 225 QVQQHFKDENGLSKLPDVVVYLPNEKKMIIDSKVSLKAYERYINSDDEQEKAGHLKAHVK 284 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 S+ H++ L K+Y+ L G T D++LMF+P+EPA LA A ++NI++VSP Sbjct: 285 SMETHLKGLKDKNYELLGGNSTPDFILMFVPIEPALFLAQSENSNFFYSAFQDNILMVSP 344 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TTLL LRT+ +W E Q +NA QIA A LYDK I+ + +G +D + Y + Sbjct: 345 TTLLSTLRTVDMVWSNEKQQQNAVQIAKHAGDLYDKFVNLIEGLDEVGNRIDSTKSTYDK 404 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 AMKKL +G+ N++ + + +GV K+ +N + Sbjct: 405 AMKKL-TGKQNLIKDVTSLKEMGVTSKKVLNSKWTD 439 >UniRef50_Q31HY1 RumC family protein n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HY1_THICR Length = 480 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 142/420 (33%), Positives = 258/420 (61%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 ++ +E + + Q+ Q E RA + + LQ+ ++ +A+L + Sbjct: 52 LKEENDRLKSEISDFQVMKGESNQRAEQLEQLRALQKEQQVTFQQLQTRHSETQAELASL 111 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 +R+E ++ +K+ + +++Q L+++F+ L+N I E +++ +Q++++++ L+ P++ Sbjct: 112 KSRLETERESNAEKLALLDSAKQTLTQEFKVLSNEILEQKQQQMGQQSKETISGLVQPIQ 171 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 L+ F+++++ ++ + R +LT ++++L++LN M+ EA NLT+ALKGD K QGNWG Sbjct: 172 TSLEQFKQRIEAVHKEDLEGRASLTEQLKHLKELNQTMSLEAQNLTKALKGDQKIQGNWG 231 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E +L ++LE++GLREG E+ET+ S + R++PDVI+ LP K V+ID+K++LV+YE Sbjct: 232 EFILRKLLESTGLREGIEFETEKSFNQEGGKRLRPDVIINLPDSKHVIIDSKVSLVSYEA 291 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 N+E + + ++ H+ S+ HI+ L K Y L L D+VLMFIP+E A+L+A++ Sbjct: 292 ALNSETENEKAQHIKNHLQSISKHIQALSDKRYDHLELLNAPDFVLMFIPIEGAYLMAIE 351 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 + + A + +V+PTTL L+TI LWRYE QS + ++ RA++++DK FI Sbjct: 352 QNSAIFENAFDKKVAVVTPTTLFTTLKTIEQLWRYERQSEHTVKLIKRAAEVHDKFVGFI 411 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 D IG+ L AQ ++ QA K++ G GN++ QAE + L + K+EI L ++A + Sbjct: 412 DTFEKIGKQLGTAQGSFEQARKQMLQGNGNLVRQAEMLKELAGKTKKEIPQHLLDEAEGE 471 >UniRef50_Q0S487 Possible DNA recombination protein, RmuC family protein n=2 Tax=Actinomycetales RepID=Q0S487_RHOSR Length = 452 Score = 312 bits (799), Expect = 2e-83, Method: Composition-based stats. Identities = 90/354 (25%), Positives = 155/354 (43%), Gaps = 10/354 (2%) Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT 169 + E S RR + ++ L+ PL E + QV Sbjct: 109 ENEALLRQSLGAVSEDSARRHSGAIGEQISRLVGPLHEAVGALAEQVDHVERNRVHAYAG 168 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L+ ++ + + + ++ + L AL+ + +G WGE+ L RV+E +G+ +++TQV Sbjct: 169 LSEQVEGMHRTSQMLSTQTNRLVTALRA-PQIRGRWGEIQLERVVELAGMVRHCDFDTQV 227 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 S ++ ++PD++V L GK +V+DAK+ AY ED RE L H +R Sbjct: 228 S-KDG----VRPDLLVYLAGGKQIVVDAKVPFAAYLDAAQTEDPTAREQHLIRHARQLRT 282 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 H+ L K Y + T ++V++F+P +P AL L+ A N++L +PTTL+ Sbjct: 283 HVDQLADKTYWESFDP-TPEFVVLFVPGDPFLDAALIADSGLLEHAFSRNVILATPTTLI 341 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LRTIA+ WR E S++A +I +LY ++ + +G L KA D++ + Sbjct: 342 ALLRTIAHTWRQEALSQDAAKIHQLGRELYSRLGTVGAHLDRLGSQLGKAVDSFNLTVAS 401 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 + S V A L V + + L N+ + Sbjct: 402 MES---RVTVTARKLHDLDVFDGDVTEVSAVDSWPRRTNLEDLSGSTGHANEAS 452 >UniRef50_A1B9E2 Putative uncharacterized protein n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B9E2_PARDP Length = 504 Score = 312 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 147/413 (35%), Positives = 237/413 (57%), Gaps = 1/413 (0%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 + + A + + + A+ + + E + L + + + + LE D Sbjct: 75 LQARCDAESAALRDQLLAVSRLETRAESLTQRLQELIEERDGLTDALHRERQQVSRLERD 134 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 L E + ++ A+ I + + ++ QF LA+ + + + + + L++LL Sbjct: 135 LAETRLAAQKDREAAERDIATLRELREEMTGQFRLLASETLKSQGGEMQKVHGEQLSALL 194 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 +P R+Q+ F+ ++Q +ER L +I L + + +++EA+ LTRALKGD++ + Sbjct: 195 TPFRDQVHRFQTELQARNKATDEERARLREQIEYLHKRSEDISREAVALTRALKGDSQKR 254 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE++L R+LE SGL G Y+TQ S + +PDVIV++PQ K +VID+K++L Sbjct: 255 GAWGEMILERILEDSGLIAGTHYDTQSSHRDGDGKLWRPDVIVKMPQKKLLVIDSKVSLN 314 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AYE NAED TR++AL+ H+ASVR H+ L K YQ ++DYVLMFIPVE AF Sbjct: 315 AYEEAVNAEDLPTRDAALRRHVASVRAHVAGLAAKGYQ-AIDESSVDYVLMFIPVEGAFS 373 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL P+L A++N + L +PTTL++ LRT+ ++W E + NA QIA RA +LYDK+ Sbjct: 374 EALRVDPDLARFAMENRVGLATPTTLMLTLRTVDHIWTVERRESNAMQIAARAGQLYDKL 433 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 F+ + +G +LD+AQ ++ AM +L+ G GNV+ QAE R LG ++ I Sbjct: 434 HGFVSAVEDVGAALDRAQKSHATAMDRLTRGPGNVIRQAEMLRDLGARTQKRI 486 >UniRef50_B6IPI4 RmuC domain protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IPI4_RHOCS Length = 524 Score = 310 bits (795), Expect = 6e-83, Method: Composition-based stats. Identities = 120/480 (25%), Positives = 213/480 (44%), Gaps = 45/480 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW-- 58 + V A++ V V + + + A LAER+ + +L A K + + + Sbjct: 10 LGIGAAVAAILVYVLVRLSVARSVLAAESRAAGLLAERDFALRQLEAMKDEAIERDRLII 69 Query: 59 -------------------RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 A L + L + + ++ EA +Q ++ Sbjct: 70 DLHDQQAELAAARASAETAAARVPDLERRLEDLAAELGLERQRVERLSMAEEALRQRLEE 129 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN------------------SL 141 + +E R E F+ L++ +N+R E + L L Sbjct: 130 NRTLLSGAEARFRETFQALSHEALSANNQRFLELAQAQLEKVQESARGDLDRRQQAIGEL 189 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + P+RE+LD F + A L ++ +L + Q+ E NL RAL+ T Sbjct: 190 VGPVREKLDKFDSAIHQLEQARAGAYAELKTQVASLIETQGQLRSETANLVRALRS-PAT 248 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGE+ L RV+E +G+ + ++ QVS + + R++PD++VRLP GK +V+DAK L Sbjct: 249 RGRWGEIQLRRVVEMAGMLDHCDFHEQVSH-DAEQGRLRPDLLVRLPGGKTIVVDAKAPL 307 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 A+ DD R + + H +R+H++ LG K Y ++V++F+P E F Sbjct: 308 EAFLDAVGTTDDAMRAAHMARHARHIRDHMKALGEKRYWSQFEP-APEFVVLFLPGENFF 366 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL++ P LI + +++ +PTTL+ LR ++ WR E + NA++I+ ++YD+ Sbjct: 367 SAALEQDPALIEAGIDQSVIPATPTTLIALLRAVSYGWRQEKLAHNAREISVLGREMYDR 426 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + + + M +G+ L A + Y +A+ L S VL A F+ L +L Sbjct: 427 LGVMAEHMQRLGKGLGGAVECYNKAVSSLES---RVLVTARRFKELKATPDNAEMVELLP 483 >UniRef50_Q3ICM4 DNA recombination protein rmuC n=4 Tax=Gammaproteobacteria RepID=Q3ICM4_PSEHT Length = 488 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 143/414 (34%), Positives = 264/414 (63%), Gaps = 1/414 (0%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 +R++ + +Q QS+ + + E+ +L+ + + +L + T +E Q Sbjct: 76 QEQRDQAQHFKTRFTEQEKQSQQYNQFWQKAEAELSALRKQYSQCDVELNNIRTTLEQKQ 135 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRR 154 QH +++ Q+ S++ L ++FENLAN+I E +++ N++S+ LL P++ +L GFR Sbjct: 136 QHFSEQLAQIEQSKEMLKKEFENLANQILEEKSQKFKVLNQESIEQLLKPVQGELKGFRD 195 Query: 155 QVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVL 214 +++ ++ ++R L E+ +LQ + + ++A L+ AL+G KTQGNWGE++L VL Sbjct: 196 KMESIHVEDLKQRAALKTELLHLQAKSQAITEQADRLSNALQGQKKTQGNWGELMLENVL 255 Query: 215 EASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDY 274 +++GLR G +Y+ +VS + R++PDV+V LPQG+ +VIDAK +L AY RY NA+++ Sbjct: 256 DSAGLRAGVDYKREVSFNTEDG-RLRPDVVVYLPQGRHLVIDAKTSLNAYTRYVNADNEL 314 Query: 275 TRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE 334 + A++EH+ +V+ I L K Y +LPGL + + V+MF+P+E AF+ AL Q ++ + Sbjct: 315 EAQQAIKEHVEAVKARINELASKSYDRLPGLNSPEVVVMFVPIESAFVEALKYQSDIYQQ 374 Query: 335 ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 A++ NI++ +PTTLL +L + LWR+E Q++ ++++A RA + Y+K+ F+ M +G+ Sbjct: 375 AIEKNILVATPTTLLTSLNIVKQLWRFEEQTKYSKELAARAERFYNKLNGFLTSMEGVGK 434 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 LD+A+++Y +A +L G+GN++ QA F+ LGV +++E+ + E+A + + Sbjct: 435 QLDRAKESYDKAFSQLYRGKGNLIKQASEFKELGVSVQKELPAESVERANLELD 488 >UniRef50_C5TKH2 DNA recombination protein n=5 Tax=Neisseria RepID=C5TKH2_NEIFL Length = 600 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 179/453 (39%), Positives = 266/453 (58%), Gaps = 17/453 (3%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQ-----------SEHWRAECELLNNEVRSLQS 74 + Q L + + + Q+TQ + AE L E +L Sbjct: 149 RLKQDYDTLLEQNHALQVQNERLSTQLTQEKANIDDKNSLLQQQEAEKGRLKQEYAALLE 208 Query: 75 INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQN 134 N +L+ + T+ E +Q A++K+ + ++ + LS+QF+NLAN I E +RR EQN Sbjct: 209 QNHALQVQNERLNTQSEKDRQAAEEKLSLLADARKNLSDQFQNLANTILEEKSRRFTEQN 268 Query: 135 RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRA 194 L LL+PL E++ GF VQ ++ KEA+ER T+ +E++ LQ LN Q+ +A LT A Sbjct: 269 HDHLQQLLNPLNERIHGFSELVQQTYEKEAKERLTIENELKRLQTLNTQLHHDAKALTTA 328 Query: 195 LKG-DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI----ENDARSRMQPDVIVRLPQ 249 L G NKTQGNWGE++L VLE SGL++G EY Q S + + R+QPDV++ LP Sbjct: 329 LTGTQNKTQGNWGEMILESVLENSGLQKGREYIVQASSVRHEADGTQRRLQPDVLINLPD 388 Query: 250 GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLD 309 K +VID+K++L AY RY + E L H+AS+R HI+ L KDY L G++TLD Sbjct: 389 NKQIVIDSKVSLTAYVRYTQS-TGAEAERELANHVASIRAHIKSLAAKDYTDLEGVKTLD 447 Query: 310 YVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQ 369 +V MF+PVEPA+LLAL P L E IML P+TLL LRT+AN+WR E Q++NA Sbjct: 448 FVFMFVPVEPAYLLALQHDPNLFQECFDKRIMLTGPSTLLATLRTVANIWRNEQQNQNAL 507 Query: 370 QIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 IA+ SKLYDK F++ M I ++L +AQ ++ A +L SGRGN+++ E R LG+ Sbjct: 508 AIAEAGSKLYDKFVGFVESMDGINKALGQAQSQFQTAYGRLVSGRGNLISSTEKLRKLGI 567 Query: 430 EIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 + +++ DL E+A+S++E++ + ++ Sbjct: 568 KAGKQLQRDLLEKAMSENEDHAALPTAQDQEND 600 Score = 42.0 bits (97), Expect = 0.044, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 15/172 (8%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTR 89 +Q+A ++ AE A K + + + ++ N + + +L AD + + Sbjct: 83 AAEKQIAYLQDCEAEAEALKHECAKWQQSAQNLQINNERLNTQLVQEQALSADKNTLLQQ 142 Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR--------RVDEQNRQSLNSL 141 E + ++ L Q E L+ ++ + + E + L Sbjct: 143 QETEKGRLKQDYDTLLEQNHALQVQNERLSTQLTQEKANIDDKNSLLQQQEAEKGRLKQE 202 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEI-------RNLQQLNAQMAQ 186 + L EQ + Q + + ++R ++ +NL +A Sbjct: 203 YAALLEQNHALQVQNERLNTQSEKDRQAAEEKLSLLADARKNLSDQFQNLAN 254 >UniRef50_A3EVG7 Putative DNA recombination protein, RmuC family n=2 Tax=Leptospirillum sp. Group II RepID=A3EVG7_9BACT Length = 477 Score = 308 bits (789), Expect = 3e-82, Method: Composition-based stats. Identities = 120/471 (25%), Positives = 207/471 (43%), Gaps = 20/471 (4%) Query: 8 YAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQS----EHWRAECE 63 + G G+L AS + ++ + A L +Q I + + R + E Sbjct: 7 ILIGLAAGGLSGYLIASARFGRRSQTLREDLAVKDALLLEHRQAIERLGLEKKQLRTQLE 66 Query: 64 LLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMI-NSEQRLSEQFENLANRI 122 + + ++ +LE RE +E +++ + + + + Q+ S F LA + Sbjct: 67 EAISRHSAAEARLEALEKADREKQALLEDSRKKLAETFQALSLEALQQNSRSFLELAQQN 126 Query: 123 F---EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + + E + ++ L+ P+ E L R +QD G+ +L +R+L + Sbjct: 127 LAGFQGQAKGDLELRQAKIDELVKPIGESLAKVERTLQDLEGERKSAYSSLNEMVRSLVE 186 Query: 180 LN-AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + ++ E + L RAL+ +G WGE+ L RV+E +G+ + ++ Q + R Sbjct: 187 NHIPRLHTETMGLVRALRQPV-VRGRWGEIQLRRVVEMAGMLDHCDFFEQ-QTSTQSDER 244 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKD 298 ++PD++VRLP K VV+DAK+ L AY + + R L EH VR HI LGRK Sbjct: 245 LRPDLVVRLPGNKQVVVDAKVPLSAYLEAAEMDSEEGRAQKLAEHARQVRQHISQLGRKS 304 Query: 299 YQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANL 358 Y + ++V++F+P E + AL P LI + ++ +PTTL+ LR +A Sbjct: 305 YWEQFQP-APEFVILFLPGEVFYSSALQADPALIEYGVSERVIPATPTTLIALLRAVAYG 363 Query: 359 WRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVL 418 W+ E +RNAQ+I LY ++ +G+SL A ++Y +A L VL Sbjct: 364 WQQETITRNAQEINKLGRDLYKRLSDLTGHWLKVGRSLGNAVESYNKATGSLE---HRVL 420 Query: 419 AQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDE 469 A + L + EI + D R S+ E E Sbjct: 421 VTARQLKDLRSGSEDEIPTP-----DAIDSRPRPVSLLGDSGSEPVFSSPE 466 >UniRef50_Q1ZJ37 DNA recombination protein RmuC n=2 Tax=Psychromonas RepID=Q1ZJ37_9GAMM Length = 460 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 200/448 (44%), Positives = 283/448 (63%), Gaps = 7/448 (1%) Query: 15 GVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQS 74 + + + + + E + L +QQ Q + + + + SLQ Sbjct: 16 ALLLLVVIIFMRLKNKNTELSINLQLNEQSLGFQQQQAVQ---YNEKIDSQTILIDSLQR 72 Query: 75 INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQN 134 N + A +RE R +A +Q D+ ++E++LS QFE L+ RIF + + N Sbjct: 73 QNQKITARVRESELRQQAGEQRLRDQ----QDNEEKLSNQFELLSQRIFSEKSEQFKNVN 128 Query: 135 RQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRA 194 ++SL LLSPL+ Q++GF++QV + E++ER+ L EI+ L +N M QE +NLT A Sbjct: 129 QESLQQLLSPLQLQIEGFKKQVTQCYIDESKERYNLQSEIKKLANINLLMQQETLNLTNA 188 Query: 195 LKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVV 254 LKGDNK QGNWGE+VL R+LE SGLREG+EYETQ +N+ R PDVIV LPQ KD++ Sbjct: 189 LKGDNKQQGNWGEIVLQRILENSGLREGHEYETQKHYKNEQGQRFLPDVIVHLPQQKDII 248 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 ID+K++LVAYER+FN++D ++ A+ H AS+R HI+ LG+KDYQ L G LDYVL+F Sbjct: 249 IDSKVSLVAYERFFNSDDVTEQKQAISAHCASIRQHIKSLGKKDYQNLLGANRLDYVLLF 308 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 + VEPAF++A++ PEL+ AL NNI+L SPT L++ALRTI NLWR++ Q +N + IA + Sbjct: 309 VAVEPAFIVAIEHDPELVKLALDNNILLASPTNLMIALRTIENLWRFDQQHKNGRHIAAQ 368 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 ASKLYDK+RLF +M +GQSL KAQD+Y A+K+LS+GRGNV+AQAEA R +GV + + Sbjct: 369 ASKLYDKLRLFSHNMLDVGQSLGKAQDSYDHALKQLSTGRGNVIAQAEALRQMGVVVNKP 428 Query: 435 INPDLAEQAVSQDEEYRLRSVPEQPNDE 462 + L A S E Sbjct: 429 LPESLVTNAGSGVSLSEATHAITDSEIE 456 >UniRef50_Q0FFZ0 Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2255 RepID=Q0FFZ0_9RHOB Length = 407 Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 140/391 (35%), Positives = 232/391 (59%), Gaps = 1/391 (0%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 A ++ + + + L ++ T+L + E+ + A ++ +D+KI + Sbjct: 2 ADERKKEVDRLNQDLSKLRGKLDLENEEKTNLSNKVSELIAQGLAERKSSDEKIEILTQF 61 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 + + +F+ LA+ + + N + L + L PL+E + F ++++ + ++R Sbjct: 62 RKDMESKFKELASEALQLQGESFSKSNIEKLEATLLPLKEHVGHFEKELRQVHEETVKDR 121 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L EI L + + Q++Q A+ L++ALKGD++ QG WGE++L +LE SGLR G EYE Sbjct: 122 ERLKAEINQLSKKSDQISQNALELSKALKGDSQMQGAWGEMILESILEKSGLRVGEEYEI 181 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q +N+ R++PDV+V LP GK +VID+K++LVAY N+E++ A + HI S+ Sbjct: 182 QAHRKNEDGERLRPDVVVNLPGGKTLVIDSKVSLVAYTDAVNSENEIDTIEAQKRHIVSI 241 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 RNHI L K YQ ++DYV++FIP+E A AL + A++ NI + +PTT Sbjct: 242 RNHINGLSAKGYQFAENS-SVDYVILFIPIEGALSEALRMDGRITEYAMEKNITIATPTT 300 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L++AL+TI+N+W E +++NA+ IADRA KLYDK+ F+ +M +G+ L +AQD+Y A Sbjct: 301 LMMALKTISNVWDVERRNKNAELIADRAGKLYDKVSGFVLNMEKVGERLTQAQDSYDTAF 360 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + S GRGNVL+Q E + LG + + I+ D Sbjct: 361 NQFSKGRGNVLSQVENLKTLGAKTSKSIDTD 391 >UniRef50_Q1IRU2 Putative uncharacterized protein n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRU2_ACIBL Length = 459 Score = 307 bits (785), Expect = 9e-82, Method: Composition-based stats. Identities = 122/454 (26%), Positives = 210/454 (46%), Gaps = 45/454 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M I +V A+V AI + Q A A E+V A + +Q+ Sbjct: 1 MGSLIFAASVSAVVAFAITYFALRSQSAAAVARLSVAERELVTARMEAANKSSQA----- 55 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 + L+ +L + ++A ++ AD+K+ ++ + + QFE LA Sbjct: 56 ----------------SQLDRELAGLRATLDAEKKAADEKLAAVLQARDDMKAQFEALAA 99 Query: 121 RIFEHSNRRVDE------------------QNRQSLNSLLSPLREQLDGFRRQVQDSFGK 162 + ++R + + +Q++ +L+ P+ E L F Q+Q Sbjct: 100 STLQANSRSFLDLAQTKLTDFQNQAKGDLNERQQAIENLVKPIHESLTKFDGQIQQIEKS 159 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 + +L ++++ L Q N Q+ + L AL+ + +G WGE+ L RV E +G+ Sbjct: 160 RNEAYGSLLNQLQTLTQSNDQLRVQTGALVTALRA-PQGRGRWGEIQLRRVAEMAGMINR 218 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 ++ Q + + ++PD++V+LP GK VV+DAK L AY A D R L++ Sbjct: 219 CDFLEQEHLSTEDGG-LRPDMVVKLPGGKTVVVDAKTPLAAYLSALEATSDTERAEFLRQ 277 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H A VR HI+ LG K Y + + V+MF+P E F AL P LI + + +++ Sbjct: 278 HAAQVRVHIKKLGAKSYWEQFE-NAPEMVVMFLPNEAFFSAALAEDPTLIEAGVADKVII 336 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 SPTTL+ LR + W+ + +RNA +++ LY+++ + +G LD A Sbjct: 337 ASPTTLIALLRAVHYGWQQQEIARNAVEVSQLGKDLYERLCTMVGYFEDVGGKLDGAVKA 396 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 Y +A+ L S VL++A F L ++IK EI Sbjct: 397 YNKAVSSLES---RVLSKARKFPDLAIQIKEEIP 427 >UniRef50_C0YVQ3 Possible DNA recombination protein RmuC n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YVQ3_9FLAO Length = 501 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 144/500 (28%), Positives = 267/500 (53%), Gaps = 52/500 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKA---------EQLAEREEMVAELSAAKQQ 51 M + I+ + L+G I + + + + +E E ++ Q Sbjct: 3 MIYLIIGFVAGGLLGAIILYFALKSSTVSRSSYDTLNALSIKAQSELENSNLKIQELTQN 62 Query: 52 ITQSEHWR------------------AECELLNNEVRSLQSINTS--------------L 79 I++ + AE LN + + L+ IN L Sbjct: 63 ISKEKEVNMLQQDLMDDLKNEFSKISAEYSSLNIQFQELKQINQRQISQIETHILEKQTL 122 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN 139 A E+ + E Q+ D + ++I ++ QFENLAN+I E + N+ +L Sbjct: 123 FAKNSELLAKNEGLQKSLDTQKEEIIKIQEESKLQFENLANKILEEKTEKFTTLNQNNLK 182 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 ++L P +E++ + +V +++ KE +ER +L +++ L +LN Q++++A LTRALKG++ Sbjct: 183 NILEPFQEKIADLKNKVNEAYEKENKERFSLAEKVKELAELNQQISEDAKKLTRALKGES 242 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA---------RSRMQPDVIVRLPQG 250 KTQGNWGE++L +LE SGL +G EY + + ++ +M+PD +V+ P Sbjct: 243 KTQGNWGEMILESILEKSGLVKGREYFLEHELRDEDNNALFSEFSGKKMRPDAVVKYPDE 302 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDY 310 ++V+ID+K++L A+ + D L +H+ S++NHI L +K Y ++LD+ Sbjct: 303 RNVIIDSKVSLTAFTELVDETDVDVYAIKLSQHLGSIKNHINQLSQKAYDDY--GKSLDF 360 Query: 311 VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 V+MFIP EPA++ A+ L A + I+L++P+ L+ +L+ IA+LW+ E+Q+RN+ + Sbjct: 361 VMMFIPSEPAYIAAMQADQNLWNYAYERRILLLNPSNLITSLKLIADLWKREYQNRNSME 420 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 IA+R +KLYDK F+D++ +G++LD+A++ Y +A K+L +G N++ Q + + LG++ Sbjct: 421 IAERGAKLYDKFVGFVDNLEKVGRNLDQAKNVYNEAYKQLHTGNDNLVIQTQKLKSLGIK 480 Query: 431 IKREINPDLAEQAVSQDEEY 450 K+++ L + + + Sbjct: 481 NKKDLPQSLIDNSNLIEPSE 500 >UniRef50_Q6MQC9 DNA recombination protein rmuC n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MQC9_BDEBA Length = 412 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 139/380 (36%), Positives = 226/380 (59%), Gaps = 3/380 (0%) Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 +E L++ ++ + ++ + + D +Q QR++ QFE +A Sbjct: 28 KLKAQFASEKSQLEADLSTAQMKNDLLSQSLSEQKTLMVDARKQQEELSQRMNTQFEVMA 87 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 +IFE + + +QN +++ S+L PL+E++ F ++V++++ E ER L E+ L + Sbjct: 88 QKIFEEKSAKFTDQNHKNIASVLEPLKERIKDFEKKVEETYSTERSERGVLRGELTKLME 147 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS---IENDAR 236 LN M+ E NLT+ALKG+ KTQGNWGE++L +LE SGLR+G EY Q + + + Sbjct: 148 LNKVMSAETQNLTKALKGEVKTQGNWGELILENILERSGLRKGEEYVIQGTDMDLRGEDG 207 Query: 237 SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGR 296 ++PDVIV LP K +++D+KMTL+AYE+Y +AE +E + HI S++ HI L Sbjct: 208 QILRPDVIVNLPDEKHLIVDSKMTLIAYEQYSSAETAEEQERLGKLHIDSLKKHIDGLSE 267 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K Y L + D+V++F+P+EPAF LA +PE+ A + N+ +VSPTTLL LRT+A Sbjct: 268 KKYHAADKLISPDFVILFMPLEPAFALAFKLKPEIFQYAWERNVAIVSPTTLLATLRTVA 327 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 LW+ + Q +NA +IA R LY+K + D+ +G+ L AQ + +KK+S GRGN Sbjct: 328 ALWKQDRQEKNALEIAKRGGLLYEKFAGLLKDLQHLGEKLGAAQKAHEDVIKKVSEGRGN 387 Query: 417 VLAQAEAFRGLGVEIKREIN 436 ++ Q E + LG + ++ + Sbjct: 388 LIDQVEDLKRLGAKTEKSLP 407 >UniRef50_Q9I4U3 DNA recombination protein rmuC homolog n=22 Tax=Pseudomonas RepID=RMUC_PSEAE Length = 453 Score = 305 bits (780), Expect = 3e-81, Method: Composition-based stats. Identities = 171/434 (39%), Positives = 265/434 (61%), Gaps = 2/434 (0%) Query: 21 LFASYQHAQQKAEQLAE-REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSL 79 L S + QQ E+ A E+ A A+ + + +E + + L Sbjct: 20 LETSREAYQQLGERHARFAGEVAALRREAELMGEERQRASQAEARWASERQGREEELRRL 79 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN 139 ++ + + Q+ ++ + ++ L QF LA +IF+ +R E ++Q L Sbjct: 80 ASERAALAAELREQQESHQQRLTDLQSARDELRAQFAELAGKIFDEREQRFAETSQQRLG 139 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 +L PL+E++ F ++V++S+ +EA+ER +L+ E+ LQQLN ++ +EA NLTRALKG Sbjct: 140 QMLDPLKERIQAFEKRVEESYQQEARERFSLSKELERLQQLNLRLGEEATNLTRALKGQ- 198 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKM 259 KTQGNWGE+VL RVLE +GL +G EYETQVS++ R QPDV++RLP K VV+DAK+ Sbjct: 199 KTQGNWGELVLERVLEHAGLEKGREYETQVSLKGAEGERFQPDVLIRLPGDKQVVVDAKV 258 Query: 260 TLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEP 319 +L AY++Y A+DD R+ AL++H+ S+RNH++ L KDY++L GL +LD+VL+F+P+E Sbjct: 259 SLTAYQQYIAADDDLLRQQALKQHVTSLRNHVKGLSGKDYRRLEGLHSLDFVLLFMPIEA 318 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 AF AL +P L +A NI++VSPTTLL LR I +LWR E Q++NA++IA+RA LY Sbjct: 319 AFSTALQAEPNLFQDAFAQNIVIVSPTTLLATLRVIDSLWRQERQNQNAREIAERAGSLY 378 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 DK LF+ D+ +G L + Y A KL+ GRGN+++++E + LG + + D Sbjct: 379 DKFVLFVQDLDEVGSRLQQLDKAYAAARNKLTEGRGNLISRSEQLKLLGARASKSLPTDW 438 Query: 440 AEQAVSQDEEYRLR 453 ++A+ E Sbjct: 439 LDRALVAPVEEAGE 452 >UniRef50_Q5WXK8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=Q5WXK8_LEGPL Length = 630 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 139/445 (31%), Positives = 251/445 (56%), Gaps = 6/445 (1%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 + +++ + + + A++Q+ + + +E + R LQ N SL + Sbjct: 162 LVSELKDYLSQEGKKTKSLEVSEKEAREQLNEIKLKMSE---QITDYRQLQERNQSLSNE 218 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 E+ T +E ++H ++++Q+ ++ L+ +FENLAN+IFE + ++ S++++L Sbjct: 219 YTELKTTLERKEEHFKEQMQQLNEAKLALTREFENLANKIFEEKGKAFTHNSQVSIDNIL 278 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P REQ++GF++++ + Q +L+ EI+ + + QM++EA NLT ALKG+++ + Sbjct: 279 KPFREQIEGFQKRINEVHDASIQGNTSLSFEIKKVLDIGLQMSKEANNLTSALKGNSQQR 338 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE L R LE SGL E YE Q S ++ + Q D +++LP GK ++ID+K+TL Sbjct: 339 GAWGEAQLRRTLEMSGLIENTHYEVQSSFKDSEGKQKQTDYLIKLPDGKHIIIDSKVTLN 398 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY+R AE + A+ EH+ +VR HI L KDY L G+R+ +VLMF+P+EPA++ Sbjct: 399 AYDRAVAAESPEEYQLAMNEHVKAVRKHIDDLTSKDYTNLIGMRSPSFVLMFMPMEPAYI 458 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL +L I+LVS TTL+ LRT++NLW E + A++I+++A ++Y+++ Sbjct: 459 EALKSNKDLFEYGYNKGIVLVSHTTLIPILRTVSNLWMIERSNAEAREISEKAGEIYNQV 518 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 + + +S +G +L A ++Y +K L +G + + + F L ++ + + E Sbjct: 519 CIVAERLSKLGSTLSIASNHYNNTVKALVGQQG-LYGKVDRFSQLSAKVSKSMPQ--LEP 575 Query: 443 AVSQDEEYRLRSVPEQPNDEAYQRD 467 + E RL + E ++E Q Sbjct: 576 SHMDFETERLSLIIEPIDEEQVQSA 600 Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats. Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 21/200 (10%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 + + + + ++ + + + Q ++ ++ LQ Sbjct: 27 LLAMVLQGRKLTYITTQLEHSQKTIEQTNNTNTEIQAQLKNTQSTLHQKELLESKLQEQF 86 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRL--------SEQFENLANRIFEHSNR 128 ++ +A+ + + + + + D ++ + Q++ + Q EN A + Sbjct: 87 SNAKANEQRLASELAMLKDELTDLGSKLEHMNQQMHISEKKYEAAQAENRALQKQASDLD 146 Query: 129 RVDEQNRQSLN---SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH----------EIR 175 + Q Q+L +L+S L++ L ++ + E + R L + R Sbjct: 147 QRLTQTNQALEKERNLVSELKDYLSQEGKKTKSLEVSEKEAREQLNEIKLKMSEQITDYR 206 Query: 176 NLQQLNAQMAQEAINLTRAL 195 LQ+ N ++ E L L Sbjct: 207 QLQERNQSLSNEYTELKTTL 226 >UniRef50_Q30U13 Putative uncharacterized protein n=2 Tax=Campylobacterales RepID=Q30U13_SULDN Length = 626 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 140/446 (31%), Positives = 238/446 (53%), Gaps = 1/446 (0%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 ++ ++E+ + A + + + + + + ++ SLQ N L+A+ Sbjct: 182 LLEENTALQSEKSVLQANSNALNESKNELLQAIKLLKDDLTSAQVKIESLQESNGELKAE 241 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + + A Q++ + + ++L + + + + ++ DE + +SL+ LL Sbjct: 242 KSKFQAELSAQQENNEKLKKDFEEQSKKLELKLNEIMQQNLDSKLKKFDETSMKSLDGLL 301 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P +E LD F+++V+DS ++ L+ EI + + +++EA +LT+ALKG + Q Sbjct: 302 KPFKENLDTFKKKVEDSQENSTKKFAELSKEIEQVTKAGMNISKEAESLTKALKGKKQMQ 361 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G+WGE++L VLE SGLR+G YETQ S +++ + +PDVI++LPQ + ++ID+K++L Sbjct: 362 GSWGEMILESVLEYSGLRKGAHYETQESYKDEEGNTKRPDVIIKLPQERTIIIDSKVSLN 421 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 Y Y +AE D R A + S +NHI L KDY + TL YV MF+P+E AF Sbjct: 422 DYSNYIHAETDEERLLATNGIVTSFKNHIDTLDSKDYAHY-KVGTLQYVFMFVPIEGAFA 480 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 +A+ + P+L ALK +I +V+P+TL V+LRTI W+ E + A ++ D A KLYDKM Sbjct: 481 MAIQQDPKLYEYALKKHIAIVNPSTLTVSLRTIYLYWQSEQSNTLASKLFDEAGKLYDKM 540 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 F D IG+ L A Y A K+L+ G GN++ + E + LG + + E Sbjct: 541 VGFSDSFGKIGKQLQSATSTYEHAHKQLTEGPGNLMGRVENLKRLGARTSKTLKDSKMEF 600 Query: 443 AVSQDEEYRLRSVPEQPNDEAYQRDD 468 + E + +PE + DD Sbjct: 601 QDFDEAEMEIELLPEPVIETLSSDDD 626 >UniRef50_D1A8I3 Putative uncharacterized protein n=4 Tax=Actinomycetales RepID=D1A8I3_THECD Length = 501 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 24/381 (6%) Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------- 132 TTR A Q+ EQRLSE FE+L+ + + SNRR E Sbjct: 24 ATTRQAVLVARAKAAEEQLSRLEQRLSEHFESLSAKALDASNRRFLELADARLRAAGAEA 83 Query: 133 -----QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + +Q++ L++PLRE L+ Q+++ + L ++ +++ + ++ E Sbjct: 84 AGELERRKQAVEHLVAPLRETLEKVAEQLREVETGRRESHAMLAKQVEFVRRSSEELRAE 143 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 L RAL + +G WGE+ L RV+E +G+ +++ QV+ + ++PD++VRL Sbjct: 144 TQALARAL-QRPEARGRWGELQLRRVVELAGMMRHCDFDEQVT-GHGDDGALRPDLVVRL 201 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 GK +V+DAK+ L AY +D R + LQ H +R+H+ L K Y + Sbjct: 202 VGGKTIVVDAKVPLSAYLEAAATDDPKLRTARLQAHARQLRDHVDHLASKAYWRAFSP-A 260 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V++FIP E AL+ PEL+ AL + + +PTTL+ LRT+A W+ E SRN Sbjct: 261 PEFVVLFIPGEAFLAPALEHSPELLEYALSRRVHIATPTTLVSMLRTVAYAWQQEALSRN 320 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+ + + +LY+++ + +G+SL A +Y +A+ L S VL A L Sbjct: 321 ARTVFELGRQLYERLGTLGGHIDELGRSLSGAVRSYNRAVGSLES---RVLVSARRMNEL 377 Query: 428 GVEIKREINPDLAEQAVSQDE 448 G+ + P + Sbjct: 378 GLVDEPLRAPRPVTDSPRAPS 398 >UniRef50_Q0C4V2 RmuC domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C4V2_HYPNA Length = 445 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 116/455 (25%), Positives = 214/455 (47%), Gaps = 30/455 (6%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 M++ + L+ V +G + Q AE + Sbjct: 14 MIHVGLLLIAVGLGIYLWQARQGGALERQR----------------------LLAERDGA 51 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 +EV L+ +L+A R+ ++ AA+ + + R+ Q + + + E Sbjct: 52 QDEVARLRQREQTLDAVARDAQLKLAAAEARSAEDERKFGELAQGVLARANTMFLERAEE 111 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + +R E + L L+ P+ E + FR++V+ +++ L+ +++ + + + Sbjct: 112 TFKRHREGAQGELKELMKPIGENFETFRQKVEALEKVRIEDKSLLSEQVKAIGESLHRNT 171 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 E L AL K G WGE+ L V+E +GL ++ QV + + R +PD I+ Sbjct: 172 AETGKLVNALTA-PKGGGRWGEMTLRNVMEQAGLSAHCDFSEQVHDDTEEG-RQRPDAII 229 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP + +VID+K++L +Y N +D R + L++H SV+ H+ L KDYQ G Sbjct: 230 RLPGDRQIVIDSKVSLASYMAATNTDDPAERLAHLKQHATSVQRHVTTLASKDYQSNLGN 289 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 R DY+ MFIP E F AL++ P+LI +A+ ++++ +PTTL+ RT+A+LWR + Sbjct: 290 R-FDYIAMFIPGENFFAAALEQAPDLIEKAMSRSVIVTTPTTLIALARTVAHLWRQHEMN 348 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 NAQ A+ ++LY +M + + +G+S++ + D+Y + L VL F Sbjct: 349 ENAQAAAELGAELYTRMGVLLGHTEKLGKSINSSVDHYNSLLGSLDK---RVLPTLRKFE 405 Query: 426 GLGVEIKREINPD--LAEQAVSQDEEYRLRSVPEQ 458 + + ++ P+ L E + + +L P + Sbjct: 406 DMKIAPPGKVPPEAKLIEARANTPDTGQLPLEPPR 440 >UniRef50_B1GYT8 DNA recombination protein RmuC homolog n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=B1GYT8_UNCTG Length = 509 Score = 301 bits (772), Expect = 2e-80, Method: Composition-based stats. Identities = 136/430 (31%), Positives = 232/430 (53%), Gaps = 7/430 (1%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 + + + A+ E+ + ++ +L+ + Sbjct: 83 AKEQKIHDLMENIENQMRDNAAKEQKIHDLTKNIENLSKDNAAKEQKINNLKENIENQTQ 142 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 + E + Q+ ++ L +FEN+A ++ E N ++ + NR SL ++ Sbjct: 143 FSNNLKIEFENIASKNIENQTQLSSN---LKTEFENIALKVLEEKNAKITDLNRISLENI 199 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + P +E++D FR ++ + EA++ L E+ L +N ++ EA NL ALKGDNK Sbjct: 200 VFPFKEKIDEFRNKIDNLQTYEAEKMSGLQKELEKLISINNSVSAEAKNLANALKGDNKL 259 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 QG WGE+ L R+ E +G+ + YE+Q + D + PD IV+LP GK +VIDAK +L Sbjct: 260 QGTWGEMCLERIFEYAGMTKDVHYESQKQFKADDGKK-IPDYIVKLPDGKHIVIDAKTSL 318 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 VAYE+Y+N +++ ++++L+EH +SV+ HI L KDY LPGL +Y LMF+P++ A Sbjct: 319 VAYEKYYNTQNEDDKKNSLKEHSSSVKRHIDELATKDYISLPGLNQPEYALMFVPLDGAI 378 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 +ALD +P+LI A K NI +V+P+TLL L+TI +WR E+Q +N +IA + LYD Sbjct: 379 SIALDDKPDLIEYAFKKNIAIVTPSTLLATLKTIQYIWRQENQKKNVIEIAKQGGSLYDN 438 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN---VLAQAEAFRGLGVEIKREINPD 438 F++ + + + +A+ ++A+K+LS+ ++A+A+ + LG K+EI D Sbjct: 439 FVTFVEVLREADKKISEAKSKTQEAIKRLSASDKKGNSLIAKAQRLKDLGSPTKKEIPED 498 Query: 439 LAEQAVSQDE 448 L + D Sbjct: 499 LLKNGDKNDA 508 >UniRef50_B9L835 DNA recombination protein RmuC family protein n=1 Tax=Nautilia profundicola AmH RepID=B9L835_NAUPA Length = 533 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 157/408 (38%), Positives = 262/408 (64%), Gaps = 5/408 (1%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E+ + + E L E+ + ++ L + +E+ T++E +++ ++ Sbjct: 129 ELQEFKTKLYENEKMLNKKNEELIELKEELDRYREQSSRLSVENQELKTKLEESEKAFEE 188 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 K+ + SE++L E FENLAN I E +N ++ + +++SL+ +L+PL+ Q+ F+ +++ Sbjct: 189 KLELLKKSEEKLKESFENLANEILEKTNEKMTKTSKESLSQILNPLQNQMKEFKEKIEFL 248 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 EA++ L +E++NL++L+ +++ +A NLT+ALKG++KTQGNWGE+VL RVLE SGL Sbjct: 249 SKDEAEKISALQNELKNLKELSHKLSTDAENLTKALKGESKTQGNWGELVLERVLELSGL 308 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 EG E+E +VS+ ++ R +PDV+V LP +DV+IDAK +L AY+ Y ED ++ Sbjct: 309 TEGREFEREVSLNDEDNKRYRPDVVVHLPNQRDVIIDAKTSLNAYQEYIKTED----KTY 364 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 ++ HI +++ HI L K Y+ L G+ +LD++ MF+P+E A +LAL+ L A K Sbjct: 365 IKAHIQALKKHIDDLADKKYEDLKGVNSLDFIFMFVPIENALMLALENDSSLFEYAFKKR 424 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 ++LVSPTTLLV+LR I + WR+E Q++N ++ A LYDK+R F +D IG+SL+ A Sbjct: 425 VVLVSPTTLLVSLRAIESSWRFERQAKNIDEVVKAAESLYDKVRGFTEDFEKIGKSLESA 484 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGL-GVEIKREINPDLAEQAVSQ 446 Q ++ A KL++GRGNV+ Q E + G++ K+EI+ DL + AV + Sbjct: 485 QKSFDNAKNKLTTGRGNVIRQVELLKEKAGIKPKKEISKDLIDIAVIE 532 >UniRef50_B6BEX3 DNA recombination protein n=2 Tax=Bacteria RepID=B6BEX3_9RHOB Length = 458 Score = 301 bits (771), Expect = 3e-80, Method: Composition-based stats. Identities = 108/428 (25%), Positives = 207/428 (48%), Gaps = 24/428 (5%) Query: 39 EEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHAD 98 ++ + + I A L +E+ +L+ + + + + +++A + Sbjct: 30 RQLEQVNADLRSHIAGLTAEVARLPELADELATLRRTSENERSARYQAEAQVQALKAEHW 89 Query: 99 DKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS------------------LNS 140 ++ ++ + Q++ +F +LAN + + ++ + + S Sbjct: 90 ARLEELHHMNQQMEHKFTSLANGVLKQNSESFLSLVSERFQAHCKTADADLAKRHAAIES 149 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 L+ PL +L F ++++ + + ++++L + A + E L +AL+ K Sbjct: 150 LVKPLDHKLGQFGERIKEIEQARNEAYGAIQAQVKHLAEGQAMLGGETRKLVQALRA-PK 208 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 T+G WGE+ L +V E +G+ E +YE + S+ D R +PD +VR+P GK +V+DAK Sbjct: 209 TRGRWGEMQLRQVFEMAGMTEHVDYELEKSVGTDDGLR-RPDAVVRIPGGKSIVVDAKTP 267 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY A+ +++AL H V+ H+R L K YQ T D+V+MFIP E Sbjct: 268 LEAYLDALEADTPEQQQAALARHANHVKTHVRQLSSKSYQSTLA-ETPDFVVMFIPGETF 326 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 A + P LI A +N +++ +PTTL+ +++IA W+ E + NA ++ A +LYD Sbjct: 327 VSAAAEADPGLIEYAFENKVLIATPTTLMALVKSIAYGWQQEKMAENAVEVQKTAKELYD 386 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 ++ F +++++G+SL + +NY +A+ L + VL A F +GV D Sbjct: 387 RLATFSKNLASVGRSLSSSVNNYNKAVGSLEA---RVLPSARRFEAMGVVANGAELEDPG 443 Query: 441 EQAVSQDE 448 + V + Sbjct: 444 QVEVEPRQ 451 >UniRef50_C7PAN1 Putative uncharacterized protein n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PAN1_CHIPD Length = 473 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 121/480 (25%), Positives = 229/480 (47%), Gaps = 28/480 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD I++ + + + Q K ++ A A TQ + ++ Sbjct: 1 MDHLIVIIFALISCAALGAVIKVVIRSNQLKTSIAVLETQLSALHETAGGLRTQVQDKQS 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E L+ ++ +Q +E++ R A+ ++ + +S ++L E F +++ Sbjct: 61 EIGQLHTRLQIMQEETIRIESNG---EARYREAENRLREQQEFIDHSNEKLKEAFNSISA 117 Query: 121 RIFEHSNRRV------------------DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGK 162 +H+N E+ +Q++++L+ PL E L F ++ Sbjct: 118 EALKHNNASFVALAKSVLETQVTDAKGDLEKRQQAIDALVKPLNETLHRFDENMRQLESN 177 Query: 163 EAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREG 222 Q+ + I +QQ ++ +E NL ALK + +G +GE+ L RV+E +G+ E Sbjct: 178 RQQQYGQINQFILGIQQSTEKLQKETHNLVSALKT-SHIRGRYGEIALRRVVEFAGMTEH 236 Query: 223 YEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQE 282 ++ QVS+++D ++PD+I++LP+GK +++D+K+ L AY R F ED+ R+ L + Sbjct: 237 CDFNEQVSVQSDDG-VLRPDMIIKLPEGKTIIVDSKVPLSAYMRAFETEDEEERKVFLNQ 295 Query: 283 HIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIML 342 H A+VR+H++ L K Y + DYV++++ +E +F AL P LI + ++N ++ Sbjct: 296 HAAAVRDHLKKLSAKAYWS-QWQHSPDYVILYMQIESSFGAALQADPTLIEDGIRNKVVF 354 Query: 343 VSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDN 402 +PTTL+ LRT+ +W+ H + N + I +LY++ + + + IG SL ++ Sbjct: 355 ATPTTLITLLRTVGFVWQQLHVAANIEDIRMAGIELYNRTNVLLRHFTNIGGSLKTVLNH 414 Query: 403 YRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP-DLAEQAVSQDEEYRLRSVPEQPND 461 Y A+ L S + QA LG +K + E V + S+PE+ D Sbjct: 415 YNDAVASLES---RFVPQARKLYSLGPALKHPLPDVKPIEAGVRYSALQQEESLPEEGED 471 >UniRef50_C3J8G5 RmuC domain protein n=2 Tax=Bacteria RepID=C3J8G5_9PORP Length = 447 Score = 300 bits (769), Expect = 6e-80, Method: Composition-based stats. Identities = 142/452 (31%), Positives = 239/452 (52%), Gaps = 18/452 (3%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQ----QITQSEHWRAE 61 M+Y++IA + V F + + +RE+ AE+ A+ Q + E Sbjct: 1 MIYSLIAAIVVVFCLAFLLLREHRISLSIREKREQEQAEIVEARTLISVQKEEIRRVTEE 60 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 + + L+S +LE + + Q+ ++ ++ + + L QF+ +A + Sbjct: 61 SVQRQSALEQLRSEKENLEHEGYRWQIECQHLQRALEEAKQKNQDQAKELQLQFKEIATQ 120 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 I E ++ + +N ++L PLRE ++ ++V++++ E++ER L IR L Q + Sbjct: 121 IVEERSKTLGVRNEETL----RPLREDIERLGKRVEETYSAESRERILLQSTIRELMQQS 176 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR----- 236 ++ E L +ALKGD+K QG+WGE++L +L++SGLR G EY Q ++ ++ Sbjct: 177 GTLSTETNALIKALKGDSKVQGDWGEMILENILQSSGLRRGEEYMVQETLRDEQGDVLHP 236 Query: 237 ----SRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 S ++PDVIVR P G +VID+K++L AY RY AEDD R+ QEH+ SVR HI Sbjct: 237 AGERSALRPDVIVRYPNGGAMVIDSKVSLTAYSRYIAAEDDEERKHFAQEHLDSVRKHIA 296 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L K Y + D+V++FIP +PA+ LAL + P L A K ++L++ T L+ L Sbjct: 297 ELSAKRYPEFITG-APDFVVLFIPNDPAYSLALTQDPALWETAYKKGVVLINGTNLIAVL 355 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 R ++W+ + Q +N ++I RAS +YDK + + + KA ++ R+A +LS Sbjct: 356 RMAQDMWQRDRQIKNVEEIVRRASTMYDKFCTYAATLVETEDKMVKATESLRKARGQLSE 415 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 GRGN + Q E R LGV+ + I + Sbjct: 416 GRGNFIHQMEQLRELGVKNTKNIPTSILPPTE 447 >UniRef50_D1BKR8 Uncharacterized conserved protein n=1 Tax=Sanguibacter keddieii DSM 10542 RepID=D1BKR8_SANKS Length = 434 Score = 300 bits (769), Expect = 7e-80, Method: Composition-based stats. Identities = 97/387 (25%), Positives = 178/387 (45%), Gaps = 14/387 (3%) Query: 90 MEAAQQHADDKIRQMI-NSEQRLSEQFENLANRIFEHSN---RRVDEQNRQSLNSLLSPL 145 M+ Q D+ R + ++ +EQF LA + + + +++ L++PL Sbjct: 57 MQHDQDRLSDQFRALAADALASNNEQFLGLAEQRLRSTQVAGQADLAARTEAVQQLVAPL 116 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 L R+Q+Q + L ++R ++ + + + +L AL+ + +G W Sbjct: 117 TRSLSDVRQQMQVAEEARIASTSALAEQVRGMRDASELLRSQTSSLVSALRTSD-VRGAW 175 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE+ L RV+E +G+ ++ Q + D + ++PD++V L GK++V+DAK+ + Y Sbjct: 176 GEMQLRRVVEVAGMLNRVDFVEQSHVSTDDGA-LRPDMVVHLAGGKNIVVDAKVAFLGYL 234 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 A D R L H VR HI LG K Y + ++V+MFIP EP A+ Sbjct: 235 DAQQATDPGYRAERLAAHARHVRKHIDDLGSKRYWDQFAP-SPEFVVMFIPAEPFLAAAV 293 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 + P L+ A N+++V+P TL+ LRT++ WR E + NAQ++ + +L+ ++ Sbjct: 294 EEDPSLLEYAFGRNVVIVTPMTLMALLRTVSYAWRQEALAENAQKVLEVGKELHGRLATM 353 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 ++ +G+ + A D Y + + L + VL A F L V P + Sbjct: 354 GSHLTRLGKQIQGAADAYNKTVASLET---RVLVSARRFAELDVVDGDLETPPPVSPHLG 410 Query: 446 QDEEYRLRSVPEQPNDEAYQRDDEYNQ 472 L + DE+ ++ + Sbjct: 411 VVSAPELLA----SVDESLVDLEDLRR 433 >UniRef50_A0LW22 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=A0LW22_ACIC1 Length = 448 Score = 300 bits (768), Expect = 8e-80, Method: Composition-based stats. Identities = 114/416 (27%), Positives = 202/416 (48%), Gaps = 24/416 (5%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 L + L+A ++EA ++ A +I ++++L E F L++ ++R Sbjct: 37 ARLAAATAELDATRAAAERQVEAERRAAAQQIESARLTQEQLREMFAALSSEALHRNSRA 96 Query: 130 V------------------DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 + +Q++ +LL+PLRE L +Q++ + A L Sbjct: 97 FVDLATETLKQITTAAEGDLAKRQQAIEALLAPLRESLAKVEQQIEQVEKERADAYGALR 156 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 ++ ++ + + Q+ E L +AL+ + +G WGE L RV+E +G+ E ++ Q + Sbjct: 157 QQVESMGKTSEQLRLETQQLVQALRA-PQARGAWGEYQLRRVVEFAGMLEHCDFVEQATT 215 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 + +R++PD+IVRLP GK VV+DAK+ LV + A D TR+ ++ H +R HI Sbjct: 216 -DAEDARLRPDMIVRLPGGKHVVVDAKVPLVGFLDAMAASDPATRDEHVRRHARHLRQHI 274 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K Y T ++V++F+P E AL+ P+L+ A++ N+++ +PTTL++ Sbjct: 275 DHLASKAYWAAVP-NTPEFVVLFVPAEAFLSAALETDPDLLQYAMERNVIVATPTTLVLM 333 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LRT+A WR E + NAQQ+ D A LY ++ ++ +G+ L A +Y A+ L Sbjct: 334 LRTVAYTWRQEALAANAQQVLDLARSLYSRLATLGGHVNKLGERLGSAVRSYNDAVASLE 393 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRD 467 S VL A L V +P E + + L + ++ +RD Sbjct: 394 S---RVLVTARRLADLKVTADDLESPRQVEVTPRRVQAAELVASADETLVSLPERD 446 >UniRef50_A1BFC3 Putative uncharacterized protein n=9 Tax=Chlorobiaceae RepID=A1BFC3_CHLPD Length = 437 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 146/399 (36%), Positives = 242/399 (60%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINS 107 K+++ Q E +E+++ L+ + + ++ + +A +KI + S Sbjct: 30 LKEELHQLRVVERELRSQVDELKAKTGELDILKVIRARLESDLDHERSNALEKIALLQQS 89 Query: 108 EQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 E RL +FE+LA RI E + E+NR + SLL PL+EQLD FR +V + + + Sbjct: 90 ELRLKTEFEHLAGRILEERGSSLGEENRVRMASLLQPLKEQLDAFRTRVDEVHRNDTEIS 149 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 L ++R LQ+L+ Q+++EA L RA+KG++K QG+WGE+++ R+ EASGL +G EY Sbjct: 150 ARLIEQVRQLQELSGQVSREANLLARAIKGESKAQGDWGELIIERIFEASGLEKGREYTV 209 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 Q S + + +PD +V LP K V++D+K++L AYERY + +D RE AL+EH+ SV Sbjct: 210 QESFRMEDGTLKRPDFMVLLPGEKAVIVDSKVSLTAYERYCSLDDVARREQALREHVQSV 269 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 R HI L K+Y + G RTLD+V+M IPVEPA+ + PE++ E + N++L PTT Sbjct: 270 RRHIAGLQEKEYSFIKGNRTLDFVIMCIPVEPAWQALMQADPEIVYELGRKNVVLTGPTT 329 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L++ L+ IA LWR E ++RNA+ IA++A ++YD++ L ++ M + L ++ AM Sbjct: 330 LMITLKLIAQLWRREKENRNAEVIAEKAGRIYDQVVLIVEAMEDARKKLSGVSQSFDLAM 389 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 K+L+ GRG++ ++ E R LG ++ +++ + S+ Sbjct: 390 KRLTEGRGSLASKVEEIRRLGAKVSKQLPGGFDDNEESE 428 >UniRef50_Q2NCT1 DNA recombination protein n=4 Tax=Sphingomonadales RepID=Q2NCT1_ERYLH Length = 485 Score = 300 bits (768), Expect = 9e-80, Method: Composition-based stats. Identities = 121/436 (27%), Positives = 206/436 (47%), Gaps = 17/436 (3%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHA 97 R + AK+ E +++ R ++ +L+ E+T ++A Sbjct: 56 RARFDERDAEAKKYADDVARMAPELATMSDRARRADALAETLDHTREELTA-LKAQAAGF 114 Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS-----------LNSLLSPLR 146 ++ R + S ++L ++FEN ++ + + + L +LL P+ Sbjct: 115 AEQKRLLEESREKLLKEFENTGAQVLGKAQEAFLARANERFGHSEKASAEKLAALLKPVD 174 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 E+L + QV+ + L I N+Q+ ++ +EA L +L K +G WG Sbjct: 175 ERLKKYEEQVETLENQRKDAFGQLHGLIENMQRGQEEVRREAQRLGNSLTNAPKARGRWG 234 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYER 266 E L VLE GL E ++ + S++ ++ R++PD IV +P K +VIDAK++L AY+ Sbjct: 235 ERALQNVLEQCGLAEHTDFHLEQSMDTESG-RLRPDAIVNVPGQKKLVIDAKVSLNAYQE 293 Query: 267 YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 F A+DD R+ L H S+RNH++ LG K YQ DYV+MF+P E AL+ Sbjct: 294 AFEADDDDARKRHLDLHAKSMRNHVQTLGSKGYQNQFE-EAPDYVVMFVPGEHFVAAALE 352 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 PEL A N ++L +PT L+ RT+A +WR + + AQ+I ++LYD++R+ Sbjct: 353 HDPELWDFAFHNKVLLATPTNLVAIARTVAQVWRQDKMAAEAQEIGRMGAELYDRLRVAG 412 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + M +G L+ A NY + + NVL G+EI +EI + + Sbjct: 413 EHMKRVGGGLETAVANYNKFVGSFE---RNVLTSGRRMAEKGLEIGKEIEEVPLVEGAPR 469 Query: 447 DEEYRLRSVPEQPNDE 462 + L + + E Sbjct: 470 YTDDDLLTDGSEEAAE 485 >UniRef50_B0NNN3 Putative uncharacterized protein n=10 Tax=Bacteroides RepID=B0NNN3_BACSE Length = 482 Score = 298 bits (764), Expect = 2e-79, Method: Composition-based stats. Identities = 154/481 (32%), Positives = 254/481 (52%), Gaps = 31/481 (6%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +I++ + G IG+L A + A K + A E A+++I + E Sbjct: 1 MNIILLPAGIIAGAVIGYLTAGRKAAALKTQVEAAGEREALLNRTAEERIARERSIAEER 60 Query: 63 --------------------ELLNNEVRSLQSINTSLEADLREVTTRMEAA-QQHADDKI 101 E L + RS E E + + +Q ++ Sbjct: 61 LQEAARQASERLDAQERLFAERLAEQARSFNERLAQQEHSFGERIAQQQRQWEQRLAEQK 120 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + +R++ +FENL+NRIF+ N + L +LL PL E++ F+ +V+ + Sbjct: 121 EEAEALHKRMNTEFENLSNRIFQSKTEDFTRLNAEHLGNLLRPLDEKIKDFKEKVEQVYS 180 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 EA+ER +L I+ L +LN +++++A NLTRALKGD+K QGNWGE++L R+L+ASGL E Sbjct: 181 TEAKERFSLGERIKELVELNNRLSEDANNLTRALKGDSKMQGNWGEMILERLLQASGLIE 240 Query: 222 GYEYETQVSIEN---------DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 G Y Q +++ ++ +MQPD+++R P ++++ID+K++L AY Y +AED Sbjct: 241 GEHYFRQEFLKDERGEAIVSEESGQKMQPDILIRYPDEREMIIDSKVSLTAYAAYTSAED 300 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 + L+ H+ SVRNHI L RKDY ++ D+V+MFIP E A+LLA+ L Sbjct: 301 RDEQARWLKAHLQSVRNHIDELSRKDYSHY-DIKAPDFVMMFIPTEGAYLLAIQSDANLW 359 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A ++L+SPT L+ ALR +LW+ E+Q +N Q I R + LY+K+ F D + Sbjct: 360 EYAYNKKVVLMSPTNLISALRLSLDLWKRENQVKNVQAIIKRGTALYEKIVGFTDTFLTL 419 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 G + Q +Y +A+ +LS G G+V+ QAE + + + K+ I+ L + Q++ + Sbjct: 420 GDRMATLQKDYDKALNQLSEGNGSVVRQAEMLKDMSLTPKKRISARLLPKEEIQEDAEQE 479 Query: 453 R 453 Sbjct: 480 D 480 >UniRef50_C6XQ43 Putative uncharacterized protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XQ43_HIRBI Length = 516 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 116/423 (27%), Positives = 209/423 (49%), Gaps = 10/423 (2%) Query: 32 AEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRME 91 E+L + + A+ A+Q TQ E +R E L+ ++ L++ E M+ Sbjct: 83 NEKLRFEQSLNAQQEKAEQYQTQLEKYRTHAEALSRKLAGLEAGQEEREKAFEVERATMK 142 Query: 92 AAQQHADDKIRQMIN-SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 + K + + + + ++ +QF +AN R+ E ++ L+S++ P++E Sbjct: 143 SLNAEIHQKFQHLADNALRQSQKQFLEIAN----EQMRQHKEVSKADLSSMIGPIKESFS 198 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 F ++V++ +++R +L EI L Q A L AL K+ G WGE L Sbjct: 199 QFSKKVENLEQVRSEDRASLRTEIEKLSQTMADTQNVTGKLANALSA-PKSGGRWGEETL 257 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNA 270 VLE +GL E ++ QV + ++PDV+VR+P G+ +VID+K+++ + + Sbjct: 258 RNVLEMAGLSEHADFSEQVHANVEDGQNIRPDVVVRMPGGRHLVIDSKVSVDDFLQASEE 317 Query: 271 EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPE 330 D + LQ H +++H+ +L RK Y T+D+V MF+P E + AL + Sbjct: 318 SDPQRQNLLLQTHARKMKDHVTVLARKAYWAQLP-DTVDFVAMFVPGENFYAAALSADRD 376 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L A +N +++V+P+TL+ + +A WR E+ ++N +++ + A +LY ++ + D + Sbjct: 377 LFDYAARNKVIIVTPSTLVALAKAVAFGWRQENAAQNTKEVTELARELYSRIAVMGDKVV 436 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 +G+ L+ A Y + + L + VL QA F LGV + PDL E E Sbjct: 437 KMGRGLNTASAAYNELVGTLET---KVLPQARKFDALGVSADGKEIPDLEEIEDHMREPR 493 Query: 451 RLR 453 R R Sbjct: 494 RGR 496 >UniRef50_Q7MXW6 RmuC domain protein n=2 Tax=Porphyromonas gingivalis RepID=Q7MXW6_PORGI Length = 432 Score = 297 bits (761), Expect = 5e-79, Method: Composition-based stats. Identities = 143/454 (31%), Positives = 238/454 (52%), Gaps = 36/454 (7%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD ++ ++A+V + WLF + E + + A+L AA +++ Sbjct: 1 MDLYWLI-IIVAIVAGLVVWLFHRRHNT--------ETDRLTAQLEAATEKLA------- 44 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 L E + I T LE L+ T+ +E + + + + F+ A+ Sbjct: 45 ---DLQEEQKEAIRIRTELETRLQATTSELEREWKRS-------GQISEEMQALFKATAS 94 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 I E R++ N + + +L PL E + F +V+ S+ +EA+ER +L E++ L + Sbjct: 95 EILEDKTRKLSGMNEERIGEILKPLSEHIKLFEEKVEKSYNEEARERFSLAKELQKLIEQ 154 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA----- 235 N++++ +A NLTRALKGD K QG+WGE++L +L SGL EG E+ Q ++ ND Sbjct: 155 NSRLSDDANNLTRALKGDPKVQGDWGEMILENLLRRSGLTEGEEFFIQETLTNDEGRTLL 214 Query: 236 ----RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 RM+PDVIVR P G++V+ID+K++L AY + +ED+ R+ L EHIAS+ HI Sbjct: 215 HDETGRRMRPDVIVRYPNGQEVIIDSKVSLTAYASFVASEDEAERKRLLGEHIASISRHI 274 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L K YQ + ++V++FIP EPA+ LAL +P L +A ++L++PT L+ A Sbjct: 275 EELASKSYQDYCD-KAPEFVMLFIPNEPAYTLALREKPTLWDQAYNKRVLLMNPTNLIAA 333 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LR +LW+ + Q +N Q+I ++A+ LYDK F + + + +A +L Sbjct: 334 LRMALDLWQRDRQVKNVQRIVEQANGLYDKFCTFAETLIRAEEQAQNTVATLAKARGQLV 393 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 GR N++ + E R LG+ K+ + + Sbjct: 394 EGRSNIVGRIEKMRSLGLSPKKNVPASFRPETEE 427 >UniRef50_D0KVZ2 Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KVZ2_HALNC Length = 531 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 126/467 (26%), Positives = 219/467 (46%), Gaps = 27/467 (5%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR-AECELLNNEVRSLQSINTSLE 80 A+ Q + E A LSA Q+++ + R +E + + L + Sbjct: 71 LAARQAQRDLTAASTELARTQATLSALSDQLSRMQAERMSERQQSEQRIDVLSRQVQTQA 130 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE-------- 132 A+ E+ R+ ++ A +K+ + ++ +L + F+ L+ +N + Sbjct: 131 AEQAELQERLAQERRAAAEKLALIDQAQVQLQQAFQALSADALRANNESFLKLAEENLAR 190 Query: 133 ----------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 + ++++ + P+RE+L+ F ++ + +I +L Q++ Sbjct: 191 FQAGAAQDLNKRQEAIVQMTQPIRERLEQFDVKLNSLEQARTNAYGAMNQQINDLLQIHL 250 Query: 183 -QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ +E +L RAL+ +T+G WGEV L RV+E +G+ E ++E QVS + R++P Sbjct: 251 PKLHRETADLVRALR-QPQTRGRWGEVQLKRVVELAGMLEHCDFEEQVSQSD-TGGRLRP 308 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D+IV LP G+ VV+DAK L AY + A D R +ALQ+H VR HI L +K+Y Sbjct: 309 DMIVHLPGGRQVVVDAKAPLNAYLQAMEAPSDEARAAALQDHARQVRTHISQLSKKEYFD 368 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 T ++V++F+P E F AL + P LI + ++ SPTTL+ L+ ++ WR Sbjct: 369 QFSP-TPEFVVLFVPGEVFFSAALMQDPTLIEFGAEKRVIPASPTTLIALLKAVSYGWRQ 427 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E ++NAQ++A+ LY++M +G+ LD+A + Q++ L G VL A Sbjct: 428 EALAKNAQEMAELGRDLYERMGTLAQHWQKVGKHLDQAVGAFNQSVGSLE---GRVLPTA 484 Query: 422 EAFRGLG-VEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRD 467 FR LG V +E P L Q+D Sbjct: 485 RKFRELGAVRSDKEDLPSLTPLTTETRPLTAQELTGPDSAAAITQKD 531 >UniRef50_D1N4C5 Putative uncharacterized protein n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N4C5_9BACT Length = 446 Score = 296 bits (759), Expect = 9e-79, Method: Composition-based stats. Identities = 149/474 (31%), Positives = 250/474 (52%), Gaps = 43/474 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEH-WR 59 M++ +++ A+I VG AIG AS + A + E E E L+ A+ + + +R Sbjct: 1 MEYLLIIAALI--VGGAIGAWTASRRFAGKVEENRREAETARVALAEAEAEKRLMQEGFR 58 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 E ELL + + ++ + + L E+F++L+ Sbjct: 59 REQELLAGQQERARQ------------------------EQEKAWQTRLELLKEEFKSLS 94 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 +RIFE + ++ N++ L SLL+PL+E++ F+ V++S K + L + + + Sbjct: 95 DRIFEEKSGKLQSANKEQLESLLNPLKEKMTEFKTAVEESKVKGIELNTALNTRLSRMME 154 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS-- 237 ++ EA NL ALKG KTQG+WGE++L +L+ SGL+ G YE Q ++ +D Sbjct: 155 ETLRIGSEAKNLADALKGGQKTQGDWGEMILEDILKRSGLKPGIHYECQATLRDDDGRTV 214 Query: 238 ------RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 RM+PDV++ P GKDV++D+K++LVAY Y N++D+ +R++AL HI S+R HI Sbjct: 215 ADPDHGRMRPDVVIHYPDGKDVIVDSKVSLVAYLDYMNSQDEESRKTALARHIRSIRTHI 274 Query: 292 RLLGRKDYQ---QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 L +K+Y T+D+V+MFIP E + LA+ +P L EA K +M VSP+ L Sbjct: 275 DELAKKNYSARLNRSDRETVDFVIMFIPNEGPYQLAMISEPSLWAEAFKLKVMPVSPSNL 334 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + L+ I W E QSRN ++I D A+++ +++ F + +G++LDKA+D Y A++ Sbjct: 335 IALLQLIHTAWTREDQSRNQREILDTAAQMLERIYAFYEQFDEVGRTLDKARDVYDAAVR 394 Query: 409 KLS--SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 +L +V+ E R LGV++ + + +EE VP Sbjct: 395 RLKHGERNRSVVLAGEKLRKLGVKMAK---ARQIPARLRPEEETGELPVPADEE 445 >UniRef50_A7ZBP6 ATP-dependent protease ATP-binding subunit n=1 Tax=Campylobacter concisus 13826 RepID=A7ZBP6_CAMC1 Length = 510 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 133/414 (32%), Positives = 235/414 (56%), Gaps = 4/414 (0%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + + + E EE+ ++ A+ + S + ++E +E++ L+ + Sbjct: 87 KEDELERELRRLNEELGSQTKMAEMARSLSLNLQSELGAKEDELKRSNESENELKRAIVA 146 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 + + +EA + + + + L+ +F NLAN+IFE + + +++SL LL+PL Sbjct: 147 LKSEIEAKENILRSQEENLKKVKNELNLEFANLANKIFEEKSANFSKNSKESLELLLTPL 206 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 E++ F ++V D+ + L+ +++ + +L M++EA +L+ ALKG NK GNW Sbjct: 207 GEKITSFEKRVNDAHSDSQKSAGELSAQLKEVVELGKNMSKEANSLSTALKGSNKVLGNW 266 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE+ L R LEA+GL +G Y TQ S + + ++ PD ++ P K ++ID+K++L AYE Sbjct: 267 GEMQLERTLEAAGLEKGTHYATQESF-DASGKKLIPDFVINFPDDKQMIIDSKVSLHAYE 325 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 + A D + AL EHIAS++ HI L +KDY L +++ D+VLMF+PVEPAFL AL Sbjct: 326 KAVAAADLAQSKLALGEHIASIKKHIDELAKKDYSSL--VKSPDFVLMFVPVEPAFLEAL 383 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 P L + ++LVS TTL+ LR +ANLWR EH ++ A++I A+++Y+K Sbjct: 384 KFDPNLFNYGYEKKVVLVSHTTLMPLLRVVANLWRMEHGNKEAKEILKSANEIYEKFCTI 443 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 + ++ +G S+ DN+ + +K + SG+G + ++ E F+ + + K +L Sbjct: 444 AEKLNRLGNSVRSVNDNFNEVVKSV-SGQGGLDSRLEKFKKIALNPKDTQVKEL 496 >UniRef50_C6NTJ9 DNA recombination protein RmuC n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NTJ9_9GAMM Length = 507 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 113/463 (24%), Positives = 205/463 (44%), Gaps = 35/463 (7%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + + A+ E + + + Q R E E L + + + L E Sbjct: 56 RQQDRIAQLERELRAEALAGAELRAENRQIAELRREQEKLREALELGRQDIGQRDRRLAE 115 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD-------------- 131 + R+ ++ A+ ++ + + + + FE L+ +N+ Sbjct: 116 LEERLLQERRQAEARVASLEEAREHFRQLFEALSAEALRRNNQSFLTLAQEKLAGFQESA 175 Query: 132 ----EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA-QMAQ 186 EQ + SL L+ P++E L ++ +L ++R L Q + ++ Q Sbjct: 176 KGDWEQRQASLQQLVQPIQESLGKVGERLDLLERARIDAYSSLNEQLRALVQDHLPRLHQ 235 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE-NDARSRMQPDVIV 245 E +L +AL+ +G WGE+ L RV+E +G+ ++ Q S+ N +PD+IV Sbjct: 236 ETASLVKALR-QPAARGRWGELQLRRVVEMAGMLAHCDFVEQESLGGNGEVGIQRPDLIV 294 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP GK + +DAK L AY + A ++ + L++H A ++ H+ LG+K Y + Sbjct: 295 RLPGGKQIAVDAKAPLNAYLQAVEAMEEGDKALWLKKHAAELKTHMGQLGKKVYWERLVP 354 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 T ++V++F+P E F AL P L+ ++ +++ +PTTL+ LR +A WR E + Sbjct: 355 -TPEFVVLFLPGEDLFSAALQADPGLLEYGVEQKVIVATPTTLIALLRAVAYGWRQESLA 413 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 NAQ I+ +LYD++ + + +G+ L +A Y +A L S VL A FR Sbjct: 414 ENAQAISALGKELYDRLGTLAEHWARVGKGLGQAVQAYNRATGSLES---RVLVTARRFR 470 Query: 426 GLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 L +E A + + S+P P + + Sbjct: 471 DL----------QASEAAKELETLEPVDSIPRHPPEGLVDSSE 503 >UniRef50_B7JBD7 DNA recombination protein RmuC, putative n=11 Tax=Bacteria RepID=B7JBD7_ACIF2 Length = 486 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 116/453 (25%), Positives = 202/453 (44%), Gaps = 25/453 (5%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 QQ EQ +AA+ + + LQ+ N+++ L E+ Sbjct: 33 LRQQAREQQEILRHESESRAAAEAESRRIPALENALVAERGNTARLQTENSAIRGQLAEL 92 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN------- 139 R+E + +K+ + ++ QRL + F++L+ +N+ E R++L Sbjct: 93 GERLEQERLRGTEKLALLEDARQRLGDAFQSLSAEALRRNNQSFLELARENLERFQESAK 152 Query: 140 -----------SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA-QMAQE 187 L+ P+RE L+ ++ L +IR L Q + ++ QE Sbjct: 153 TDWEGRQKAVGQLVEPIRESLEKVGTRIDAMEKTRIDAYGALNEQIRGLVQDHLPRLHQE 212 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 L +AL+ +G WGE+ L RV+E +G+ ++ Q + D+ + +PD++VRL Sbjct: 213 TAALVKALR-QPAARGRWGEMQLKRVVEMAGMLAYCDFTEQEGVNTDSG-QQRPDLLVRL 270 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 P GK +V+DAK L AY +D+ R L +H + +R H+ L +K Y + T Sbjct: 271 PGGKRIVVDAKAPLSAYLEAMETDDEQKRAHFLHKHASELRTHMTQLSKKSYWEQFQP-T 329 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V++F+P E F AL P LI ++ +++ SPTTL+ LR +A WR E + N Sbjct: 330 PEFVVLFVPGEVFFSAALQEDPSLIEYGVEQKVIVASPTTLIALLRAVAYGWRQESLAEN 389 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+ I+D +LYD++ + + +G+ L +A + Y A L S VL A FR L Sbjct: 390 ARAISDLGKELYDRISILAGHWARVGKGLGQAVEAYNSATGSLES---RVLVSARKFRDL 446 Query: 428 GVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 + P + + + Sbjct: 447 KATPEARELPGMDPVERVPRLLQAEEFIGPEAT 479 >UniRef50_Q883E2 Putative uncharacterized protein n=2 Tax=Pseudomonas syringae pv. tomato RepID=Q883E2_PSESM Length = 639 Score = 295 bits (755), Expect = 2e-78, Method: Composition-based stats. Identities = 146/439 (33%), Positives = 248/439 (56%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 A + + E ++ +L A +Q Q + R + E+ ++ + + Sbjct: 200 AAHANSQTRIEKAEEEFKKQREQLGQAAEQKEQLDVLRGTLVQRDKELGVVRDELSLAKQ 259 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 L EV R Q A +K++ + +++ +L ++F+NLAN+IF+ + EQ+RQ L++L Sbjct: 260 SLAEVNMRHARDQHSAAEKLQLLEDNKVQLKQEFQNLANQIFDSKQQSFSEQSRQGLDTL 319 Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 L P ++QLD FR++V Q + ++ +E+ L +LNAQ+ EA NLT+ALKGD K Sbjct: 320 LKPFKDQLDSFRQRVDQVHSDTVQGQSSMKNELVKLMELNAQITTEASNLTKALKGDKKL 379 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 QG WGE + +LE +GLR+G+EY + + +ND +PD +V LP+GK ++ID+KM+L Sbjct: 380 QGTWGEQKVEMLLEQAGLRKGFEYHREANFKNDEAGNNRPDFVVNLPEGKHIIIDSKMSL 439 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 VAY Y +AE D R AL H+ +++NHI L K Y L G+ + D+V +F+PVEPA+ Sbjct: 440 VAYTEYVSAETDEERTRALSAHVLALKNHINGLSDKKYTDLNGINSSDFVFLFMPVEPAY 499 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 L+A + P + A + I +++ TTLL LR ++NLW + Q+ + Q+A A+K+YDK Sbjct: 500 LVAAEHSPGVFQAAYEKRIAIITATTLLPVLRVVSNLWSIQRQNSSTLQLATMATKVYDK 559 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 +R+F++ M +G + Q +Y +++ L G++ + F LGV + + + Sbjct: 560 LRVFVEKMDKLGNQIATVQKSYNESITTLKGDHGSLTKTVDKFVALGVTVSKRLPASAIG 619 Query: 442 QAVSQDEEYRLRSVPEQPN 460 + + E + V N Sbjct: 620 EDEELESELAILPVEGAAN 638 Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 81/221 (36%), Gaps = 7/221 (3%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAERE-----EMVAELSAAKQQITQSEH 57 + + + +L+ + IG+ S A + A+QLAE + E L+ A + + Sbjct: 6 LTPALIGLFSLLFLGIGFWINSRVAASKLAQQLAELKAAHQAEHQQLLNDAALAHQREQQ 65 Query: 58 WRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 E E E+ L R+++ ++ + D + ++M + ++L+E Sbjct: 66 MLHEQEEHQRELALLSEDIGRHRDVERQLSIQLGELKASLDAEKQRMSDKVEQLTEVNTL 125 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 NR E + R+ + QL+ ++ + + + L + L Sbjct: 126 AENRSLESNKLRMQLGELRVQVGQGQEQTRQLEELKQILAQHQMRLEAAQLQLQKQGEQL 185 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 Q Q Q +A +++T+ E + E G Sbjct: 186 GQSTEQANQLLE--LKAAHANSQTRIEKAEEEFKKQREQLG 224 >UniRef50_D2S9Q8 Putative uncharacterized protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S9Q8_9ACTO Length = 387 Score = 294 bits (752), Expect = 5e-78, Method: Composition-based stats. Identities = 91/331 (27%), Positives = 149/331 (45%), Gaps = 5/331 (1%) Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + L P+ E LD R + A L ++ + Q +A + QE L AL+ Sbjct: 50 DDGLEPVHESLDHLHRLLAGIERDRATAHGELREQMGTVGQTSAMLRQETAALVTALRT- 108 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 +G WGEV L RV+E +GL E ++ Q S NDA + ++PD++V L G+ VV+DAK Sbjct: 109 PHVRGRWGEVQLRRVVEVAGLLEHCDFVEQPSATNDAGAGVRPDLVVTLSDGRQVVVDAK 168 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 + Y AED R + H +R H+ +L + Y + ++F+P + Sbjct: 169 VPFTGYIEAVQAEDVAVRAERIVAHARQLRAHVDILAARRYPTAFRPAAP-FTVLFVPSD 227 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 AL+ +P L+ +++L +P+TLL LRT+A WR E +R+A Q+ + +L Sbjct: 228 GFLTTALEAEPGLLEYGFARDVVLATPSTLLALLRTVAYSWRQERLARDADQVLEVGRRL 287 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + ++ ++ +G +L Y + + S +VL A F LGV P Sbjct: 288 HARLSTLSGHLTRLGSALSSTLTRYNETVGSYES---SVLVAARRFDDLGVAESPVPTPP 344 Query: 439 LAEQAVSQDEEYRLRSVPEQPNDEAYQRDDE 469 E V L + P D+ Sbjct: 345 PVEATVRTLRPAELPLPGDLPRRTGPAAHDD 375 >UniRef50_Q2CAS5 DNA recombination protein RmuC n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CAS5_9RHOB Length = 472 Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats. Identities = 141/434 (32%), Positives = 236/434 (54%), Gaps = 5/434 (1%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 A H + + R A A ++ + E R + + LQ + +L++ Sbjct: 44 ARRLHREAEQACGTARSTGAALEEAVRRLEAEMEAQRTAQKDQQAKHADLQEKHAALQSA 103 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + + A ++I ++ + + ++++FE+LA + +++ L+ LL Sbjct: 104 HAALQADSDGKLASARERIEELKSLREEMAKKFEDLAAATLRKTGSEFSATHQEKLSELL 163 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P RE + F ++++ +ER L+ ++R+L + + EA LTRALKGD + Q Sbjct: 164 KPFREHVSRFEVELREVHRSADKERAQLSQQVRDLTIQSETVRSEAAALTRALKGDKQKQ 223 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE++L R+LEASGL Y Q + +R +PDV+V+LP+ K ++ID+K++LV Sbjct: 224 GAWGEMILERILEASGLERDVHYMVQQQRTGEDGARYRPDVVVQLPRKKCLIIDSKVSLV 283 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 +YE NAE + R L+ H A+VR H+ L K Y L +DYVLMF+P+E A Sbjct: 284 SYEAAVNAETEEERAEHLKAHAAAVRRHVTQLADKAYYALEDT-AVDYVLMFMPIEGALA 342 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL+ P+L + A+ +I L++PTTL+V LRT+ ++W E + NA+ IA RA +LYDK+ Sbjct: 343 AALNEAPDLASFAVSRHIGLMTPTTLMVTLRTVEHIWTVERRESNAEDIAKRAGRLYDKL 402 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 F+ D++ +G +L KA + +A+KKL+ GRGN ++Q E + +G + I D Sbjct: 403 ANFVGDLTKVGDALGKASQAHEEALKKLTHGRGNAISQVETLKQMGARATKSIAIDY--- 459 Query: 443 AVSQDEEYRLRSVP 456 + DE RL + Sbjct: 460 -DADDEPARLPAAE 472 >UniRef50_B6BID3 DNA recombination protein RmuC n=1 Tax=Campylobacterales bacterium GD 1 RepID=B6BID3_9PROT Length = 359 Score = 291 bits (746), Expect = 2e-77, Method: Composition-based stats. Identities = 139/318 (43%), Positives = 220/318 (69%) Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 +L +++ E + + +K+ M N+++ LS++F+ LAN+IFE +++ + Sbjct: 27 QEKNNLRLSYAVLSSSYEHEIRSSKEKLEIMQNAKEELSKEFKLLANQIFEDKSKKFNHT 86 Query: 134 NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 +++ LL P REQ+ F Q ++ F EA+ERH L E+ L+++NAQ++QEA+NLT Sbjct: 87 HKEQFEMLLRPFREQITNFSTQSREQFSYEAKERHLLKDELVRLKEMNAQLSQEALNLTN 146 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDV 253 ALKG+NKTQGNWGE+VL R+LE SGLREG EY+TQ ++++ +PDVI+ +PQ +D+ Sbjct: 147 ALKGENKTQGNWGEIVLERILEESGLREGMEYKTQATLKSGDGKIYRPDVIIHMPQDRDI 206 Query: 254 VIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 +ID+K++LVAYER+ + E+ + AL+EHI+S+ HI+ L K+Y++L G+ TLD+VL+ Sbjct: 207 IIDSKVSLVAYERFMSQENPDAKALALKEHISSIAGHIKDLSSKEYERLEGVNTLDFVLL 266 Query: 314 FIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIAD 373 F+P+E AFLLAL+ E A +NI++VSP+TLLV LRTI ++WR + Q +A++IA+ Sbjct: 267 FMPIEGAFLLALEADGEFFKRAYDSNILVVSPSTLLVTLRTIEHIWRTQRQEEHAKKIAN 326 Query: 374 RASKLYDKMRLFIDDMSA 391 A +YDK+ LF+ Sbjct: 327 EAEAMYDKLVLFVKKYIK 344 >UniRef50_A8M2X7 Putative uncharacterized protein n=2 Tax=Salinispora RepID=A8M2X7_SALAI Length = 403 Score = 291 bits (744), Expect = 5e-77, Method: Composition-based stats. Identities = 95/368 (25%), Positives = 170/368 (46%), Gaps = 13/368 (3%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 R + + E RL + L+ Q+++++ ++P Sbjct: 27 AARVRSATELARLEATLAAARAGESRLEQSLRTLSYEA--------TAQSQEAVARAVAP 78 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L E L + ++V + L ++R + ++ ++ E L AL+ + +G Sbjct: 79 LHETLHRYEQRVNELERDRVDAYAELRAQVRAMSTVSGELRTETKQLVAALRA-PQVRGR 137 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE L R++EA+G+ E ++ QV+ + ++PD++VRL G+ VV+DAK+ AY Sbjct: 138 WGEHQLRRIVEAAGMLEHCDFAEQVTAATTDQRVVRPDLVVRLHGGRSVVVDAKVPFEAY 197 Query: 265 ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLA 324 A D+ R++ L H +R HI L K Y ++ ++V++F+P +P +A Sbjct: 198 LTAMEARDERGRDTHLDAHARHLRAHIDALAAKAYWAAFD-QSPEFVVLFVPADPFLDVA 256 Query: 325 LDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRL 384 + R P L+ A N++L +P TL+ LRT+A WR E + NA + A +L+ ++ Sbjct: 257 VQRDPTLLEHAFARNVVLATPATLVALLRTVAYTWRQEVLASNAVAVHTLARELHGRLCT 316 Query: 385 FIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAV 444 + + +G +L A Y +A+ L + VL A LGV + P E A Sbjct: 317 LGEHVGRLGSALGGAVTAYNRAVGSLEA---RVLVSARKLAELGVSDEELATPAQVELAP 373 Query: 445 SQDEEYRL 452 Q + L Sbjct: 374 RQPQAPEL 381 >UniRef50_B9ZNS3 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZNS3_9GAMM Length = 442 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 108/456 (23%), Positives = 203/456 (44%), Gaps = 26/456 (5%) Query: 31 KAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM 90 A +L E AA + + LN + LQ+ N LEA+L R Sbjct: 1 MAGELTELSTTAWLALAAALLVGLLLGYTLASLRLNRRIGDLQTRNARLEAELEGAEQRR 60 Query: 91 EAAQQHADDKIRQM--------INSEQRLSEQFENLANRIFEHSNRRVDE---QNRQSLN 139 E +Q + +++ + + S QF LA I ++ + Sbjct: 61 EDLRQSFETARQELDRSFSALASEALEANSNQFLRLAQSILTQKLSEGQNEIARSENKVE 120 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 ++L P+RE L ++ AQ L +I+ L NA + +EA NL +AL Sbjct: 121 AMLKPIRETLGKTEAEINAMERSRAQAFAALNEQIQRLSSDNATLQREAHNLVQAL-SRP 179 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKM 259 +G WGE+ L R +E +GL ++ Q ++ + R +PD++V +P + +V+DAK Sbjct: 180 GVRGRWGELTLKRAVELAGLSAHCDFTEQPAL-DGDGGRQRPDLLVHMPGNRALVVDAKT 238 Query: 260 TLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEP 319 L AY A D R +A + H +R+ + L K Y ++ ++ ++F+P +P Sbjct: 239 PLDAYLDAVAATDPEPRAAAFKRHAQHLRSRVTELSSKQYWASVE-QSPEFAVLFLPGDP 297 Query: 320 AFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 AL+ +P L+ AL+ ++L +P+TL+ LRT+ W+ + +A +I D ++L Sbjct: 298 FLAAALEHEPGLLEYALERQVLLATPSTLIALLRTVEYGWQQSQLTEHALEIRDLGAELS 357 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 ++ + M+ +G++LD++ D + + + L V+ A F+ LG+ ++ Sbjct: 358 HRLGTMTEHMARLGKALDQSTDAFNKTVGSLE---RQVMPSARRFQELGIRARKTPETP- 413 Query: 440 AEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR 475 + R+ D+A D+ +++ Sbjct: 414 --------DTLNNRARRPVEVDDAGDTGDDNKPETQ 441 >UniRef50_A6DC11 DNA recombination protein RmuC n=1 Tax=Caminibacter mediatlanticus TB-2 RepID=A6DC11_9PROT Length = 415 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 141/438 (32%), Positives = 240/438 (54%), Gaps = 24/438 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M + LVG+ + + QL +E L E + Sbjct: 1 MKEIYTLIIFSILVGLIFILWIIEKRKNKILQNQLNYLKEENNFLK------INLEDKKN 54 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E + L L +D ++++ + ++ + ++ ++++L +FE LAN Sbjct: 55 ELSNIQKRYDELMQEYIILNSDFSALSSKFQEKEKFYKE----LLENKEKLKNEFEVLAN 110 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 IF+ + +N ++++ +L P+ +Q+ F ++ K+ + L +E++NL++L Sbjct: 111 SIFD----KFSIKNEENISKILDPISKQVKDFEEKIIYLKEKDIE----LMNELKNLKEL 162 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 N +++ EA NLT+ALKGD K QG WGE++L RVLE SGLR+ E+ + S+ + Sbjct: 163 NYKLSVEAENLTKALKGDKKIQGIWGEMILERVLEMSGLRKDKEFIREKSLIC-NGEVFR 221 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PDVIV+LP + ++IDAK +L AY Y ED +S L+EHI +++NHI L K+Y+ Sbjct: 222 PDVIVKLPNNRYIIIDAKTSLNAYSEYIKTED----KSYLKEHIKAIKNHIDKLASKNYE 277 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 L G+ TLD++ MFIP+E A +AL+ L A K ++L +P+TLLV+LR+I +WR Sbjct: 278 NLDGINTLDFIFMFIPIENALKVALEYDSTLYEYAFKKRVILTTPSTLLVSLRSIEAIWR 337 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 +E Q+ N +++ A +Y+KMRLF++D I +S++ + Y A KL SGRGN++ Sbjct: 338 FERQNENIKEVIKLADNIYNKMRLFLEDFEKIDRSIEYTKKYYLNAKNKLISGRGNLIDL 397 Query: 421 AEAFRGL-GVEIKREINP 437 E + G++ K+E+ Sbjct: 398 LENMKEKAGIKPKKELRE 415 >UniRef50_Q9REQ3 DNA recombination protein rmuC homolog n=3 Tax=Zymomonas mobilis RepID=RMUC_ZYMMO Length = 448 Score = 290 bits (742), Expect = 8e-77, Method: Composition-based stats. Identities = 124/449 (27%), Positives = 216/449 (48%), Gaps = 24/449 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 + + + L G+ I L + QQK L A + ++E Sbjct: 1 MTAFLPFLAFLFGLIIAGLPLLWYIRQQKTALDG--------LQARVLEGAKAEEQARRI 52 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 L V S + + L A+ E ++ +I Q+ +E LS++F++LA + Sbjct: 53 PALEQAVESWREKASLLMAEQAANKRGEEEREKAYRQQIEQLKATEDALSQKFDSLAAKT 112 Query: 123 FEHSNRRVDEQNR-----------QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 E ++ + EQ + L LL P+++ L + V+++ E +LT Sbjct: 113 LEKAHGQFLEQAQMRFAKSEREGEAKLELLLQPVKDSLKRYEASVKEAEQLRQTEYGSLT 172 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 + +++ + EA L AL+ K +G WGE L VLE+ GL E ++ET+VS+ Sbjct: 173 ALVSTMREGQEAVKNEANKLVNALRTAPKARGCWGEQQLRNVLESCGLSEYVDFETEVSV 232 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 ++ R++PD I+R+P G +V+D+K++L AY+ ++A D+ R+ LQ H +++ HI Sbjct: 233 NSEKG-RLRPDAIIRIPNGSILVVDSKVSLNAYQDAYDAVDEDKRQLYLQAHSKAIKAHI 291 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 L +K+Y DYV+MFIP E AL++ L A + ++L +PT L+ Sbjct: 292 DGLSQKNYWDQFK-EAPDYVIMFIPGEHFLSAALEQDHNLWEYAFQKRVLLATPTNLIAI 350 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 RT+A +WR E + NA++I + +LY+++ M A+G SL+ + NY + + Sbjct: 351 ARTVAAVWRQEDIAHNARKIGELGKELYERIAKVDAHMRALGNSLENSVKNYNKFVGSFE 410 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLA 440 S VL A FR L +E K + + Sbjct: 411 S---RVLVTARKFRELNIETKEQEIKEAP 436 >UniRef50_C8XKL5 Putative uncharacterized protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XKL5_NAKMY Length = 398 Score = 290 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 88/321 (27%), Positives = 159/321 (49%), Gaps = 7/321 (2%) Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 D+++ L++LL+P + + + + + A L ++ L +A + + Sbjct: 34 DQRSAAELDALLAPASDAMQRVEQHLHEVERDRAAAYAGLREQVSALHLTSADLNRHTRA 93 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR--MQPDVIVRLP 248 L AL + +G WGE+ L RV+E +G+ E +++TQV + +D ++PD+I+RL Sbjct: 94 LAGALSA-PQVRGRWGEMQLQRVVELAGMVEHCDFDTQVGVRSDDPEAAGVRPDMIIRLA 152 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 G+ + +DAK+ +Y D+ R + L H ++R+H+ L K Y + Sbjct: 153 GGRQIPVDAKVPFASYLEAAECTDERRRSALLAAHSRALRSHVDALAAKAYWRHFQP-AP 211 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V++F+P EP AL P L A N+++ +PT+L+ LRT+A++WR E S +A Sbjct: 212 EFVVLFVPGEPLLDAALAVDPGLADYAFARNVVMATPTSLIGLLRTVAHVWRQERLSASA 271 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 Q+ + L+ ++ ++ +G SLDKA Y ++ L S VL A LG Sbjct: 272 AQVHELGRDLHRRLATLAGHLTTLGASLDKAVRAYNGTVRSLES---RVLVSARKLADLG 328 Query: 429 VEIKREINPDLAEQAVSQDEE 449 V + +P E +E Sbjct: 329 VTGEELPSPAQVETTTLVPQE 349 >UniRef50_Q1GRF8 Putative uncharacterized protein n=1 Tax=Sphingopyxis alaskensis RepID=Q1GRF8_SPHAL Length = 451 Score = 290 bits (741), Expect = 1e-76, Method: Composition-based stats. Identities = 113/421 (26%), Positives = 203/421 (48%), Gaps = 15/421 (3%) Query: 53 TQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLS 112 + + ++ + + + L + EA + ++RQ+ +++ L+ Sbjct: 33 AERDGLAERFRSAVTDLAAETEARQAADIRLAALRAEQEAREAAHAAQVRQLQDAQAALT 92 Query: 113 EQFENLANRIFEHSNRRVDEQNR-----------QSLNSLLSPLREQLDGFRRQVQDSFG 161 QF + + + + E+ Q L +LL P+ E+L+ + V+ Sbjct: 93 AQFREVGQAMLGEAQKEFLERAEARFRQSEESAGQHLKALLQPVHERLEKYETAVKKVET 152 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 + L +I +++ + +++ EA L AL+ K +G WGE L VLE+ GL E Sbjct: 153 ERQSAFGMLQGQIESMRAQSERVSSEAAKLVNALRNAPKARGRWGEQQLRNVLESCGLSE 212 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQ 281 +++T+VS+ + R++PDV+V++P G+ +VIDAK++L AY+ F A D+ + + L Sbjct: 213 HADFQTEVSVADGDGGRLRPDVVVKVPGGQSLVIDAKVSLNAYQDAFGAVDEGEKAAHLA 272 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 H A+++ H+ LG K Y T D+V+MF+P E ALD EL A + ++ Sbjct: 273 AHAAAMKAHVNALGAKAYWNQFD-DTPDFVVMFVPGEHFLAAALDHDHELWDYAFERKVL 331 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 L +PT L+ RT+A +WR E + A++IA +LY +M + ++ +G++LD+A Sbjct: 332 LATPTNLIAIARTVAAVWRQEKLANQAREIAMLGKELYARMSVMGSHIARVGKNLDQATG 391 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPND 461 Y + S VL QA+ F L +E P L + +L + P ND Sbjct: 392 AYNAFVGSFES---QVLTQAKRFEALDIETGGREIPTLPVAEQAARPLAKLAAAPSAVND 448 Query: 462 E 462 Sbjct: 449 A 449 >UniRef50_B2ULX8 Putative uncharacterized protein n=1 Tax=Akkermansia muciniphila ATCC BAA-835 RepID=B2ULX8_AKKM8 Length = 417 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 90/397 (22%), Positives = 187/397 (47%), Gaps = 24/397 (6%) Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD------ 131 + + Q+ A+D+ + + +E+ L + F ++ + +S ++ Sbjct: 27 RYRDRSVRLEAESRSWQERAEDRTQMLRRAEEVLKDSFAGISAEVLRNSEKQFLNLAETR 86 Query: 132 ------------EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + +Q++ S+L P+ E L + ++ + + L +IR + Sbjct: 87 LQSQRQQANHDLDSRKQAIESMLKPVSESLKLVQSRLGEMEKERVGAYTDLKTQIRYILS 146 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 N + E L++AL ++ +G WGE+ L RV+E +G+ E ++ TQ + + R+ Sbjct: 147 GNEALKNETARLSQALHHNS-VRGQWGELQLRRVVELAGMVEYCDFTTQETRSREE-ERV 204 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PD+++ LP G+ ++IDAK + +Y E+ R + H A V+ H++ L K+Y Sbjct: 205 RPDMVIHLPGGRSIIIDAKAPMASYLNAGQTENPEERSQWMARHAADVKRHLQQLSAKNY 264 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 + ++V+MF+P E F AL+ P LI +N ++L +P+TL+ L+ +A W Sbjct: 265 FAQFS-QCPEFVIMFLPGESFFQAALEADPSLIEFGAENKVILSTPSTLIALLKAVAYGW 323 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E + NA++I++ + LY+ + S++G+SL++A Y + + + Sbjct: 324 KQEQLADNAKKISEAGADLYNTCSILSGHFSSLGKSLNQAVAQYNKTVSSFE---HRFIP 380 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVP 456 +A+ + LGV +E+ L + + Sbjct: 381 RAQKLKNLGVTSTKELPRSLEDITEQAKSADVPDTTS 417 >UniRef50_UPI0001C31BC1 protein of unknown function DUF195 n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31BC1 Length = 364 Score = 288 bits (738), Expect = 2e-76, Method: Composition-based stats. Identities = 91/339 (26%), Positives = 168/339 (49%), Gaps = 6/339 (1%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 + R E+ Q++++++ P+ + L Q+ A +R L +I+ L + Sbjct: 19 VLALRGRHSTERRAQTVDAMVDPIHQSLRRVDEQLAALDRDRAHQRGALEQQIKQLVESQ 78 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 ++ E L AL+ T+G WGE+ L RV+E +G+ + ++ Q S++ + ++P Sbjct: 79 ERLRGETGALVAALR-QPHTRGRWGELQLRRVVELAGMLDHCDFTEQASVQGEHG-VLRP 136 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D++V LP GK VV+DAK L A+ + A+D+ TR L +H +R H+R L K Y Sbjct: 137 DLVVNLPGGKHVVVDAKAPLHAFLNAYEAQDETTRTRELAQHARLLREHVRALSAKAYWA 196 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 D+V +F+P E + AL+ P L+ + +++ +++ +PTTL+ LR +A W+ Sbjct: 197 QFPT-APDFVFLFLPGEHFYTAALEADPSLLEDGVRDGVLIATPTTLIALLRAVAYGWQQ 255 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E + +A+Q+A+ +L+ ++ F + +G L A Y +A+ S VL A Sbjct: 256 ETVAESARQVAELGRELHHRLGTFGAHLDRVGTRLRSAVGAYNEAVGSFDS---RVLPSA 312 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 F GV + P +A ++ E + + Sbjct: 313 RQFSRHGVVGRERELPAVAPVDLTARELHAPELREDDTP 351 >UniRef50_C6V407 RmuC domain protein n=2 Tax=Neorickettsia RepID=C6V407_NEORI Length = 408 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 142/390 (36%), Positives = 234/390 (60%), Gaps = 9/390 (2%) Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 ++ S E E L+ +R L S + S+ L E + + + + + S++ Sbjct: 23 KVRTSTILENEQEKLDKALREL-SESESICKKLEEENSDLMRRVVQLESEKKSFEYSQRA 81 Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 + +FE LA++I E S R+ EQ+ + LL PL+ ++ F +++++SF + +ER++L Sbjct: 82 MYAEFETLASKILEGSAVRLKEQSINDIGGLLEPLKLKITEFEKRIEESFHADIKERYSL 141 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 EI + +M +EA L R+L+GD+KTQG+WGE+VL+++LE SGL++G +Y Q Sbjct: 142 AKEIARMASQTDRMIEEANKLGRSLRGDSKTQGSWGELVLSKILECSGLQKGRDYMLQQK 201 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 +END PDVI+ LP GK +V+DAK L Y+ Y N + L+ + SVRNH Sbjct: 202 LENDT----IPDVIINLPDGKHLVVDAKTPLKHYDLYINTHEKG----HLENFLKSVRNH 253 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 ++ L K+Y L T +V MF+PVE A+ LAL EL AL++ +M+VSP +L+ Sbjct: 254 VKNLSGKEYHSAQELFTPGFVFMFVPVESAYALALSTDLELKELALRSRVMIVSPNSLVA 313 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 L+ ++++W+ Q++NA +IA +A +YDK LF+D+++ IG S+ + YR AM KL Sbjct: 314 MLQAVSSVWKIVDQNKNANEIAKKAGAMYDKFVLFVDELAKIGHSIANSDRLYRSAMNKL 373 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 GRG++L++AE +G+G++ +EIN D Sbjct: 374 RDGRGSLLSRAEDLKGMGIQANKEINEDRL 403 >UniRef50_C1YHK2 Uncharacterized conserved protein n=4 Tax=Actinomycetales RepID=C1YHK2_NOCDA Length = 466 Score = 287 bits (735), Expect = 5e-76, Method: Composition-based stats. Identities = 96/402 (23%), Positives = 180/402 (44%), Gaps = 16/402 (3%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQFENLANRIFEHSNRRV 130 + AD R R ++ D+ R + + + +++F LA + Sbjct: 17 ARGREAETRADARAAQERAAYVEEQLADRFRALSAQALDQTNQRFMELAEGRLRAVSAEA 76 Query: 131 ---DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 ++ R+++ ++ PL LD RQ++++ A L ++ +++ + ++ + Sbjct: 77 GGDLDERRRAVERMVEPLTRTLDRVERQLREADAGRAAAHAELAKQVEYVREGSERLRDQ 136 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 +L AL+ + +G WGE+ L RV E +G+ ++E Q + + +R +PD++VRL Sbjct: 137 TQSLVTALRR-PEARGRWGELQLRRVAELAGMGSHCDFEEQAATRDGSR---RPDMVVRL 192 Query: 248 PQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 GK++V+D+K+ L AY A L+ H +R H+ L K Y Sbjct: 193 AGGKNIVVDSKVPLAAYLDAVEAG-AEEAARHLRVHARHLRTHVDQLAAKAYWSAFTP-A 250 Query: 308 LDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRN 367 ++V++FIP E AL+ PEL+ A+ + + +PTTL+ LRT W+ E S N Sbjct: 251 PEFVVLFIPGEAFLAPALEYDPELLEYAMGRRVHIATPTTLISLLRTAQYAWQQEALSEN 310 Query: 368 AQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 A+ + D +L++++ + +G++L + Y Q + L S VL A F L Sbjct: 311 ARAVFDLGKQLHERLGTLGGHVEGLGRALTRTVSAYNQTVGSLES---RVLVTARRFGEL 367 Query: 428 GVEIKREINPDLAEQ---AVSQDEEYRLRSVPEQPNDEAYQR 466 G+ P E+ AV+ E + + Sbjct: 368 GLVDGELDRPVGVEERPRAVAAPELSDPGGAGSAARERSGPD 409 >UniRef50_D0LE03 Putative uncharacterized protein n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LE03_GORB4 Length = 391 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 6/330 (1%) Query: 111 LSEQFENLANRIF---EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQER 167 L + E++A + E + RR +N ++ PLR L +++ Sbjct: 36 LRQSREDVAQSLSWATEDAARRQSSAIGSQVNHIVEPLRSTLTALADELRRVEHNRVGAY 95 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 LT ++R + + + + L AL + +G WGE+ L RV+E +G+ ++ T Sbjct: 96 AGLTEQMRGMHAASMALGDQTRQLANALHS-SHARGRWGEIALERVVELAGMTRHCDFST 154 Query: 228 QVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASV 287 QVS ++ + ++PD++V L G+ +V+DAK+ L AY R D + L +H +V Sbjct: 155 QVSAQSATGT-VRPDLLVHLAGGRTIVVDAKVPLDAYLRAAEVTDRAEAQRLLADHARAV 213 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 R+HI L K Y T + V++F+P E A ELI N+++ +PTT Sbjct: 214 RSHITKLSAKAYWTAFD-NTPEMVVLFLPAEAVLEAAARADAELIEYGFGRNVVIATPTT 272 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L+ LRT+A WR++ +R+A I + L+ ++ + + ++G SL K ++Y A+ Sbjct: 273 LVALLRTVALGWRHDAMARDAAVIHELGLTLHQRLHSVLGHLESVGSSLRKTVESYNSAV 332 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 + + G + GLG + + Sbjct: 333 GVVENRLGVTARRLAELEGLGRDDEPPAPA 362 >UniRef50_B1ZS87 Putative uncharacterized protein n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZS87_OPITP Length = 462 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 114/452 (25%), Positives = 210/452 (46%), Gaps = 49/452 (10%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 V + WL +HA + A E E + L E+ +++ Sbjct: 37 VSGLLVWLLLVARHAPVRERLRAASE---------------------ENQRLATELAAVR 75 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE- 132 + L + +++T++ A + A +K+ +I++ RL+ +F+ L+ +N E Sbjct: 76 AELAQLSSLNTQLSTQLAAERASATEKLATLIDAHTRLTNEFKALSADALSRNNTSFLEL 135 Query: 133 -----------------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 Q +Q++ +L+ PL+E L ++ + +LT ++R Sbjct: 136 ARETFAKLQQQSVGELAQRQQAITALVQPLKESLQQVDAKIGAIENARKEAYGSLTEQLR 195 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 +L Q+ EA L+ AL+ G+WGE+ L RV+E + + ++ Q + Sbjct: 196 SLNTAQLQLQSEASRLSTALRSTTYA-GSWGELQLRRVVEMADMLGYCDFCEQ-----ET 249 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 ++ D++VRLP G+ +V+DAK L ++ A D+ R + L EH VRNHI LG Sbjct: 250 SGSLRADLVVRLPGGQRIVVDAKTPLESFRAASEATDENVRAARLAEHAQKVRNHIDALG 309 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 K+Y + ++V++F+P + AL L+ A+ ++L +P+TL+ L+ Sbjct: 310 AKNYWEQFQP-APEFVVLFLPGDQFLGAALHADSSLMDRAIAKRVLLATPSTLIALLKAA 368 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 A WR E S+NA++I+ +LYD+M F + + IG+ LD A Y A+ S Sbjct: 369 AYGWRQESISQNAEEISLLGRQLYDRMVTFAEHLDKIGRGLDNALKGYNSAVGSFES--- 425 Query: 416 NVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 +V+ A F LG +E++ +A +++ Sbjct: 426 SVMPGARRFAELGARGAKELSTPAVVEANARE 457 >UniRef50_A1AWD8 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=A1AWD8_RUTMC Length = 378 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 129/364 (35%), Positives = 240/364 (65%), Gaps = 7/364 (1%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD 131 L + +L++D + ++ + +++I + ++ ++S+ F+ +A I + + Sbjct: 21 LNARLQTLKSDKIRLEVCLDEKIKSYENQIDLINIAKVQISKDFKAIAGDILVKNRYDLS 80 Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 +N + LL+PL+ QL FR +++ ++ +ER TL+ +I NL++ + ++ + NL Sbjct: 81 IKNSE----LLTPLQVQLKEFRDKIETITSEQIKERATLSVQIENLKKTSIEIQETTQNL 136 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 T AL DNK QG+WGE++L+ +L +SGLREGYE++ Q +N++ ++PDV++ LP+ K Sbjct: 137 TNALTYDNKQQGDWGEMILSSILSSSGLREGYEFDVQKQFKNESGEILKPDVVLHLPEEK 196 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 D+++D+K++L AY Y + + + L+ H+AS+ HI + K+Y+ L + TLD++ Sbjct: 197 DIIVDSKVSLKAYNDYITNQSN---KQLLKAHVASIEAHINGISIKEYENLQDVLTLDFI 253 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 +FIP+E A L+AL+++P L T ALK NI+LVSP+TL+++L+T+ ++W+ E Q++N+++I Sbjct: 254 FVFIPIESALLIALEKKPGLFTMALKKNIVLVSPSTLMMSLKTVHHIWQTERQNQNSEEI 313 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 A +A +YDK+ FI M I + LDKA +Y++A KLS G+GN++ +A+ + LGV+ Sbjct: 314 ARQAGAMYDKLFGFIQSMDDIEKHLDKASKSYKKARAKLSDGKGNLIGRAKKLKELGVQS 373 Query: 432 KREI 435 K+++ Sbjct: 374 KKKL 377 >UniRef50_C5CGB7 Putative uncharacterized protein n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGB7_KOSOT Length = 439 Score = 285 bits (728), Expect = 3e-75, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 209/461 (45%), Gaps = 40/461 (8%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 + ++ALV I + A + EL ++ ++ EH+R E Sbjct: 4 LLSWIITLVALVVTIIMAISALK---------------LYKELKKNIEEKSKFEHYREEN 48 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 + L E+ SL++ N L+ + + E + DDK+ + +++ L + F+ LA+ + Sbjct: 49 QNLLKEIDSLRAENEHLKIE----KAKYEKDIESLDDKLSWLEKAKEELEKNFKALASDV 104 Query: 123 FEHSNRRVDEQ-----------NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 + Q + L LL PL+ LD + +++ K + L Sbjct: 105 ALKNTESFLNQANDKLKGLIDNQKTELEKLLDPLKNNLDTLQNNIREIESKREKAYGGLE 164 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 + L +++ ++ LT +LK +G WGE L R++E +G+ ++E Q Sbjct: 165 KRLEELSRVHNELQTGITKLTSSLKSTT-ARGRWGEFQLKRIVELAGMTAHIDFEEQEVT 223 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 E +PD+I++LP G + +DAK L AY + D ++ L EHI ++R I Sbjct: 224 EAG-----RPDMIIKLPNGGVIPVDAKAPLNAYLEAMECQSDEEKKKKLNEHIKNLRKTI 278 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 LG K Y + ++ D+V+MF+P+E A A + P L+ +A+K +++ +P TLL Sbjct: 279 TNLGSKAYWEQFQ-QSPDFVIMFVPLEAAVSAAFEMDPTLLEDAVKRKVLITTPITLLAL 337 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L+++A W+ + NA++IA+ +LY ++ F++D+ +G+ L Y A+ L Sbjct: 338 LKSVAYGWQQFQLTENAKKIAEEGKELYKRLSKFLNDVDTVGKRLKSLVQAYNTAVGSLE 397 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRL 452 + +L +A F+ E + E L Sbjct: 398 T---RLLPRARKFKEYSEIEGEEPDIQPLEVDPRPINAPEL 435 >UniRef50_D2PN95 Putative uncharacterized protein n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PN95_9ACTO Length = 409 Score = 284 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 90/352 (25%), Positives = 167/352 (47%), Gaps = 9/352 (2%) Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQE 166 + R++ + + +R+ E + R + S ++ ++E LD Q+ A Sbjct: 35 ALARITAERDAAEDRVVELTQERHTVGQQMSGQAV---VKEALDRLHAQLNQLEKGRAAW 91 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 + L ++ ++ + +E +L+ AL+ + +G WGE+ L R +E +G+ ++ Sbjct: 92 QSQLHQQVNEVRMSGEALRRETASLSTALR-KPQVRGRWGELHLRRTVELAGMVAHCDFT 150 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q S D ++PD++VRL +GK++V+D+K+ L A+ ++D RE L+ H Sbjct: 151 EQTSTATDDG-MLRPDLVVRLAEGKNLVVDSKVPLAAFLEAAESDDADFREERLRAHARH 209 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 +R H+ L K Y T ++V++F+P E ALD +P L+ A + ++L +PT Sbjct: 210 LRTHVDQLSAKSYWARLPS-TPEFVILFVPGESFLSAALDVEPSLLEYAAERRVILATPT 268 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL+ LR A W + +AQQ+ + +LY+++ D + +G+SL A D Y + Sbjct: 269 TLIATLRAAAYAWNQSALTESAQQVFELGRELYERLSTMGDHLGRVGRSLTSAVDAYNRT 328 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 + S V A R L V + E +V L ++ E Sbjct: 329 VGSFES---RVFTTARKLRDLHVTEAELAAMETIEASVRPLAAPELLALDEP 377 >UniRef50_C0N8A5 RmuC domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8A5_9GAMM Length = 429 Score = 283 bits (723), Expect = 1e-74, Method: Composition-based stats. Identities = 100/411 (24%), Positives = 188/411 (45%), Gaps = 31/411 (7%) Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 + LE E+ +E Q++ + + ++L+ F L+N +N Sbjct: 32 ARNKKIRMLETRNSELALTLELEQKNKQQLDAMLDQTREQLANTFNQLSNEALNRNNSNF 91 Query: 131 DEQNRQSL------------------NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 ++L +L P+ E L +Q+ + + +L Sbjct: 92 LRLAEENLKRFQSEAKADLGTKEKAIEQMLKPINEALQQTSKQIHEIEKDRKESYGSLRS 151 Query: 173 EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIE 232 I + + Q+ E NL +AL+ + +G WGE+ L R+ E SG+ ++ Q Sbjct: 152 TIDQMTKSQQQLQLETQNLVQALRR-PEVRGQWGEMTLRRLAELSGMVAHCDFFEQTHTN 210 Query: 233 NDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 + S ++PD+IV+LP+ +D+++DAK L AY A+DD TR+ L+ H +R+ ++ Sbjct: 211 TETGS-IRPDMIVKLPEKRDIIVDAKTPLDAYLSAIQAKDDSTRQKELKRHAQVIRSRVK 269 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 L RK+Y + ++V++FIP E AL+ P L+ +++ NI+L +PT + L Sbjct: 270 ELARKNYW-AEYSNSPEFVVLFIPGEQFLAAALEVDPALLEDSMSQNIILATPTNFIALL 328 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 R ++ W+ + + NA+ I + LY ++ F + +S +G SL +++ A+ L Sbjct: 329 RAVSYGWKQQALAENAENIRELGETLYKRLSTFGNHLSKLGNSLGSTVNHFNSAVGSLE- 387 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 VL A F +G+ K +I+ E + R V + +D+ Sbjct: 388 --RQVLPGARKFTEMGISSKHKIS-------DLPPIEQQPRPVQQNTDDDH 429 >UniRef50_Q7VK39 Putative uncharacterized protein n=2 Tax=Helicobacter RepID=Q7VK39_HELHP Length = 456 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 131/442 (29%), Positives = 234/442 (52%), Gaps = 23/442 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ-SEHWRAE 61 +++ A L G +I WL+ ++ +++++ +A L Q + + + E Sbjct: 8 LLLIICASFVLSGGSI-WLWLHHRFKKKQSQLIATHNATTQSLQIQIQNLEKHIQTLSLE 66 Query: 62 CELLNNEVRSLQSINTS--------LEADLREVTTRMEAAQQHADDKI----RQMINSEQ 109 ++ ++S +T EA L E TR E ++ + +++ Sbjct: 67 YAQATTTLQMIESSHTQRLNDMQKVCEARLLEEKTRSEHMIHTLKEQFYHTQEEQDKNKE 126 Query: 110 RLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHT 169 L F+ ++ I + + ++ SL PLRE++ F +Q+ D+ + Sbjct: 127 ELKNAFKAISADILRQNTQSFNQMQLLSL----QPLREEITRFTKQLNDNHTATLTQHTA 182 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L +I L +LN Q++ +A NLT ALKG NK QGNWGE++L RV E SGL+EG EYE Q+ Sbjct: 183 LQTQIEQLSKLNVQLSNDAHNLTNALKGGNKAQGNWGEIILQRVFENSGLQEGREYELQI 242 Query: 230 SIENDARSRMQPDVIVRLP----QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIA 285 S+ ++ ++PD IV+LP + + V++D+K +LVAYE+ NA+++ + SA +E Sbjct: 243 SMRDEQSQILRPDAIVKLPKSGNEQRCVIVDSKTSLVAYEKLCNAQNEMQKLSAQKELAH 302 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 S++ H L K+Y Q + LD+VLMFIP+E AFL A+ L A + ++LVSP Sbjct: 303 SIQMHFNNLSAKNYHQYLQGQKLDFVLMFIPIEGAFLEAMQYDSTLYDRAYQKGVVLVSP 362 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 TT++ L+ I NLW+ E++ +N +I + KL++++ F + + +G+++D + Y Sbjct: 363 TTIMAVLKIIHNLWQIEYRDKNINKIFNEIKKLFERIEKFENVLEQLGRNIDTMRKTYDD 422 Query: 406 AMKKLSSGRGNVLAQAEAFRGL 427 M K + +G + +++ L Sbjct: 423 VMTKYNGKQG-IAPKSKDIDKL 443 >UniRef50_B8GRQ8 Putative uncharacterized protein n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRQ8_THISH Length = 417 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 101/393 (25%), Positives = 192/393 (48%), Gaps = 25/393 (6%) Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 + + + ++A ++ +++ S +++++ F +AN+ +N ++ Sbjct: 27 RAQRLVAVLQAELDAERRRGEERAAAFEESRRQMADSFSAMANQALHQNNEAFLRLAQEQ 86 Query: 138 L------------------NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 L L+ P+RE L+ Q++ +LT +R + + Sbjct: 87 LKAFQVQASAELTQKEKSFEGLVKPIRETLEKTEAQIRAMEQARESAFGSLTQHLRIMAE 146 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 ++ E NL RAL +G WGE+ L R+ E +G+ E +++ Q + + M Sbjct: 147 GQQRLQNETHNLARAL-SRPTVRGQWGEMTLKRLAELAGMVEHCDFQEQTHRATEDGA-M 204 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PD+IVR+P +++V+DAK L AY +A DD RE L+ H +R +R L K Y Sbjct: 205 RPDMIVRMPDARELVVDAKTPLDAYLAAVDAPDDKHREQHLKTHARKLRERMRELSSKAY 264 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 + D+V++FIP + AL+ P L+ +AL N ++L +P++L+ LR +A W Sbjct: 265 WTQFK-ESPDFVILFIPGDQFLSAALEHDPALLEDALSNRVILATPSSLVALLRAVAYGW 323 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R + + NA++I + +LY ++ F + + IG+SL + D+Y +A+ L +V+ Sbjct: 324 RQQAVAENAEKIRELGEELYKRLATFTEHLGRIGKSLGSSVDHYNKAVGSLE---RSVMP 380 Query: 420 QAEAFRGLGVEIKREI-NPDLAEQAVSQDEEYR 451 A F LG++ ++++ P EQA + Sbjct: 381 GARRFAELGIQARKQMEEPVPLEQAPRPPIQEE 413 >UniRef50_C5C0V9 Putative uncharacterized protein n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C0V9_BEUC1 Length = 523 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 110/481 (22%), Positives = 216/481 (44%), Gaps = 32/481 (6%) Query: 5 IMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECEL 64 +++ ++G A+GW A+ + ++A ++R +AA++ ++ A Sbjct: 6 LLIAIAALVIGGAVGWFAATARAGSERARLGSDRRAAQERAAAAERSAEAADRAWAGRLE 65 Query: 65 LNNEVRSLQSINTSLEADLR------EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 V + + +AD R ++E + A +++ ++ +RL+++FE L Sbjct: 66 DERRVTARRVEEERDDADRRVAEAEHRAEVQLERERTAARERVEELRADSKRLADEFETL 125 Query: 119 ANRIFEHSNRRVDEQNRQSLN------------------SLLSPLREQLDGFRRQVQDSF 160 + + + ++ Q + L L+ PL L + ++ ++ Sbjct: 126 SRKALAANTQQFLAQAEERLKRTQVESAAELAKREQAVKQLVEPLTRTLGDVKSEMTEAE 185 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 L ++R +QQ + Q+ E L AL+ + +G WGE+ L R++EA+G+ Sbjct: 186 KARLAAHTALAEQVRAMQQSSEQLRTETSQLVTALRA-PQVRGRWGELQLRRIVEAAGMV 244 Query: 221 EGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESAL 280 E ++E Q ++ + ++PD++V+LP K +V+D+K+ Y A DD TR L Sbjct: 245 EHVDFEEQETVADGT---LRPDLVVKLPGRKQIVVDSKVAFSGYLEAMEARDDETRAKRL 301 Query: 281 QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNI 340 H +R HI LG KDY + ++ +MF+P E AL++ P L+ A ++ Sbjct: 302 AAHARHLRRHIDDLGAKDYGHHVEG-SPEFTVMFVPAEVFLNAALEQDPTLLEHAFAQDV 360 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 ++ +P+TL+ LRT+ WR E + AQQ+ +L+ ++ +F +S + + L+ Sbjct: 361 VIATPSTLVALLRTVGYTWRQEMLAAEAQQVFSVGRELHKRLSVFGGHLSTLAKRLNSTV 420 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPN 460 D + + L S V+ QA F L P E ++ L P+ Sbjct: 421 DAFNKMSSSLDS---RVVTQARKFSALQGLEPDLDVPPPLEVLAVPSQKPDLYPAHLDPD 477 Query: 461 D 461 + Sbjct: 478 E 478 >UniRef50_D1XY83 RmuC domain protein n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1XY83_9BACT Length = 477 Score = 280 bits (717), Expect = 6e-74, Method: Composition-based stats. Identities = 125/471 (26%), Positives = 244/471 (51%), Gaps = 41/471 (8%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ--SEHWRAECE 63 M Y + L+G I +L+ Q+ ++ + + +LS ++ + ++ +A E Sbjct: 1 MFYILTFLLGALIVYLWLKAQNTKELGQLKTDLSLAQNQLSIVRENAAKSLADAKQAAAE 60 Query: 64 LLNNEVR--------SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----L 111 L N+ + +++ SL+A R+E ++HA + ++ + L Sbjct: 61 KLENQQKTFEVRLSSEKEAMAKSLQAVKDNAQERIEQEREHAANLREELQKENENKLKLL 120 Query: 112 SEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 E+ N+ ++ ++++ ++ L++LL+PL+E+L+ F + V S + A+ + + Sbjct: 121 QEEVRNMGEQMLTEHRQKLNTADKDRLDALLNPLKERLEAFSQTVTKSSKESAEAKTEIR 180 Query: 172 H--------------------------EIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 + L++ ++ +A +LT+ALKGD+K QG+W Sbjct: 181 TTFEESLKRLQEGQKHNIELMREDHLRAVEELKKQTERIGNDAASLTQALKGDSKMQGDW 240 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GE++L LE GL++G +Y Q +++++ + +PD I+ P + VIDAK++L AY+ Sbjct: 241 GEMILEHTLEDCGLKKGEQYFLQENVKDEDGNNYRPDAIIAFPNNERAVIDAKVSLTAYQ 300 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 AE ++ L+EHI SVR H+ L K+Y L + YVLMFIP E + A+ Sbjct: 301 AALKAESKDEQDKYLKEHIKSVRTHVDELAAKNYDVLVPG-CIGYVLMFIPYESGYSAAI 359 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 ++ A + +I+++SP+ LL+AL+ +W+ ++N ++I +++ LYDK LF Sbjct: 360 KTDASILQYAYRKHIIILSPSNLLMALQLTHTMWQNYRLNKNVEEILRQSNDLYDKFALF 419 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 + IG S+D+ + Y +A +L++G+GNV+ + E+ + LG+ K+E Sbjct: 420 AETFINIGASIDQLKTRYDKARGQLNTGKGNVVRKLESLKALGITPKKENP 470 >UniRef50_C2AV49 Uncharacterized conserved protein n=1 Tax=Tsukamurella paurometabola DSM 20162 RepID=C2AV49_TSUPA Length = 361 Score = 280 bits (717), Expect = 7e-74, Method: Composition-based stats. Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 19/335 (5%) Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 E + ++L+PLR+ LD + + L +I + + + + E L Sbjct: 42 EAIAGPVGAMLAPLRQTLDALGHEFAVAERSRVAAFAGLREQIGTVARTSEALRAETATL 101 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 A+K +G WGE+ L RV+E +GL ++ TQV+ R++PDV+V L G+ Sbjct: 102 RSAMKSST-VRGRWGELQLERVVELAGLSRHCDFSTQVAGVVGDD-RVRPDVVVHLAGGR 159 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 D+V+DAK+ L AY + A + L +H R+H+ L + Y G + + V Sbjct: 160 DLVVDAKVPLDAYLQVLEAP-PAEHAALLADHARRFRSHVVQLAGRRYWDAVG--SPELV 216 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 +MF+P E AL P+L+ AL N++L +PTTL+ LR +A WR +A++I Sbjct: 217 VMFVPAEAFLDAALQVDPDLLEFALNRNVVLATPTTLVAMLRAVALAWRQHALGEDAERI 276 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 +L +++ + + S++G +L +A D + + ++ V A L Sbjct: 277 HALGRELSERLDVLNNHFSSLGSALTRAVDAFNTTVGSYNA---RVGVTARRLADLASMP 333 Query: 432 KREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQR 466 ++D+ L + P A+ R Sbjct: 334 DG-----------ARDDHPGLDAAPRAVPHGAHSR 357 >UniRef50_A1SFL0 Putative uncharacterized protein n=1 Tax=Nocardioides sp. JS614 RepID=A1SFL0_NOCSJ Length = 374 Score = 280 bits (716), Expect = 9e-74, Method: Composition-based stats. Identities = 89/329 (27%), Positives = 158/329 (48%), Gaps = 15/329 (4%) Query: 142 LSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKT 201 + + + LD Q+ A + ++ LQ +E +L+ AL+ + Sbjct: 59 QAEVMQGLDRLSDQMHHLDRARATWQGHFDTQVDQLQ-------RETRSLSTALR-KPQV 110 Query: 202 QGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL 261 +G WGE+ L R +E +GL + ++ QV +++ AR +PD++V L G+ VV+DAK+ L Sbjct: 111 RGRWGELHLRRAVELAGLVDRCDFSEQVRLDDGAR---RPDLVVHLVGGRRVVVDAKVPL 167 Query: 262 VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 AY + +D+ + L+ H+ +R H+ LG K Y + + ++V++F+P E Sbjct: 168 DAYLDATSTDDEEEHRAHLRRHVTQLRTHVEALGSKQYWRSLE-ESPEFVVLFVPAESFL 226 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 AL+ P LI A ++L +PTTL+ LRT+A+ W +E + A++I +L+ + Sbjct: 227 AAALETDPTLIEHAAARQVVLATPTTLIALLRTVAHGWSHEALADQAREIHRLGRELHGR 286 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + + +G+SL+ A +Y Q + L S VL F L V + +P + Sbjct: 287 LLGMTGHLDQLGRSLNAAVGHYNQTVGSLES---RVLVSGRRFADLSVTDEELPSPRQID 343 Query: 442 QAVSQDEEYRLRSVPEQPNDEAYQRDDEY 470 LRSV + D+ D Sbjct: 344 ATARSISPSGLRSVERRAADDDPGADHTV 372 >UniRef50_A3UFB9 DNA recombination protein n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFB9_9RHOB Length = 495 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 121/492 (24%), Positives = 221/492 (44%), Gaps = 44/492 (8%) Query: 4 SIMVYAVIALVGVAIGWLFASYQ-----HAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 I + ++G L + +E AE E EL A+ ++ Q E Sbjct: 8 LIALGGACLILGGVSVVLLRKAWGEADGLRTRLSEMQAELSEAQLELREAQTELRQIESL 67 Query: 59 RAECEL------------------------LNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 R + E L ++ + + ++LR + R+E Sbjct: 68 RVDLEKTRTVRDQAERELASARTQADRVQGLEEQLEATRQAEQRASSELRALRERLEERD 127 Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS-----------LNSLLS 143 + ++ Q + ++F+ LA+ + S++++ EQ +QS + SL+ Sbjct: 128 AAVKAERERLTALSQEMQDRFKALADEALDVSSKKLLEQAQQSFKTQHEKAEGGVKSLVD 187 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 P+RE+LD FR QV+ A+ + +I L Q +E L AL+ + T+G Sbjct: 188 PIRERLDKFREQVEKMEQDRARNSGAIAEQITKLSQGLNDQHKETAKLVNALQRKSTTRG 247 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 WGE + +LE +GL + +Y+ Q + + ++PD +++LP G V+D+K+ L A Sbjct: 248 QWGERTVENILELAGLTKNIDYDAQHQTRDTDGAALRPDFVIKLPGGGRFVVDSKVALTA 307 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 Y AED+ +R AL+ H V+ H++ L +K+Y +D+V +FIP E + Sbjct: 308 YLDAVEAEDEASRRDALRRHAQQVKTHVKQLAKKEYAASVDG-AIDFVALFIPGESFYSA 366 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 A++ P L +A+K N+++ +P TLL + +A +R E +NAQ++A +L+ ++ Sbjct: 367 AIEEDPALFDDAIKANVIITTPATLLALAKAVAYGFRQEKLEQNAQKVAALGDELFTRLN 426 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 F D + +G L A NY +A+ S VL +A L ++K+ +P ++A Sbjct: 427 TFSDHLGRVGAGLKSATANYNKAVGSFDS---RVLPKARDMAQLNGQMKQIESPAQVDEA 483 Query: 444 VSQDEEYRLRSV 455 Sbjct: 484 PRLLTGPDEEKA 495 >UniRef50_A5H239 RmuC family protein (Fragment) n=1 Tax=uncultured bacterium RepID=A5H239_9BACT Length = 404 Score = 280 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 104/420 (24%), Positives = 197/420 (46%), Gaps = 27/420 (6%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+ M+ AL+ + + A E AEL R Sbjct: 1 MNLPAMLLTAGALLFGLLAGYLLASMRFHAAETGRAALEGSAAEL-------------RN 47 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 + E+L + ++ QS + T ++ +++ ++ + + ++ + + F +LA+ Sbjct: 48 QVEILRSSLQEQQSRLEKEKELRAAAETSLQKVEENLAEQRQALDQAKAEMKDVFRSLAS 107 Query: 121 RIFEHSNRRVDEQNRQSLNS-----------LLSPLREQLDGFRRQVQDSFGKEAQERHT 169 + ++ E ++ L L+ PL E+L + Q Sbjct: 108 EALSATTQQFIELSQAHLEGELEPRKIAIEGLVHPLAERLKDLESHLSQLESARQQAYGE 167 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 L ++R L + + QE LT AL+ + +G+WGE+ L R +E +G+ ++E Q Sbjct: 168 LISQVRQLSDVGRDLRQETGTLTSALRH-PRVRGSWGELTLRRAVELAGMSPHCDFEEQG 226 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 ++ + R++PD+IV +P +D+V+DAK+ L A+ + ++ + R+ A++ H VR Sbjct: 227 TLTAEDG-RLRPDLIVHMPGNRDIVVDAKVPLSAFLKASESDTEAQRQEAMRSHARLVRE 285 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 HI+ LG K Y + V++F+P E F AL+ LI +AL+ ++L SPTTL+ Sbjct: 286 HIQQLGSKAYWNELPGN-PELVILFMPGESFFSAALECDRTLIEDALERRVLLSSPTTLI 344 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 LR+IA WR NA QI+D +LY ++ F++ ++ + + LD+A Y +++ Sbjct: 345 AILRSIAYGWRQHQMEENAAQISDLGKELYSRIVKFVEHIADVREGLDRAAAAYNRSVGS 404 >UniRef50_C9MSJ8 RmuC domain protein n=1 Tax=Prevotella veroralis F0319 RepID=C9MSJ8_9BACT Length = 465 Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats. Identities = 115/453 (25%), Positives = 233/453 (51%), Gaps = 32/453 (7%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 I +L+ + Q ++ + + ++L A ++ I E + + Sbjct: 15 VISFLWLKGKMTQDVSKANEQLAALRSQLEAEQKSIEDRLAVAKENATQQVDATKEAADR 74 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----LSEQFENLANRIFEHSNRRVDE 132 LE T R+EA ++H ++ ++ + L E+ N+A ++ S +++ Sbjct: 75 -QLEEVKNSYTQRLEAERKHNEELRNELQKQAEAKNKLLQEEVRNMAAQMLSESREKMNT 133 Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE------------------- 173 +++ L +LL+PL+++L+ F + V ++ + A + + Sbjct: 134 ADKERLEALLTPLKDRLEAFNQTVTNNSKETAANKTEIKTTFEEAMKRLHAEQEMTIKAM 193 Query: 174 -------IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 ++ L++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL + ++ Sbjct: 194 REDQERTVKELREQTERIGNDAASLTKALKGDSKMQGDWGEMILEKTLEDCGLIKDQQFF 253 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIAS 286 Q + +++ + +PD ++ LP + V+D+K++L AY+ D +E L+EH++S Sbjct: 254 LQENYKDEEGNNFRPDAVIELPNKERAVVDSKVSLTAYQSAIKETDPDEQERLLKEHVSS 313 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 VR HI L K Y+++ + YVLMFIP E + AL P ++ A + +I+++SP+ Sbjct: 314 VRKHIDELSAKGYEKIVPG-CIGYVLMFIPYESGYSAALKTDPSILQYAYRKHIIVLSPS 372 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 LL+AL+ +W+ ++N +I +++ LYDK F + IG S++K Q ++ +A Sbjct: 373 NLLMALQLTRTMWQNYRLNKNVDEILRQSNDLYDKFVTFGETFVKIGTSIEKLQSDFNKA 432 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 +L+ G+GN++ + E + LG+ K++I +L Sbjct: 433 KGQLNEGKGNIIRRLEGMKTLGITPKKQIPDNL 465 >UniRef50_A0RPQ7 RmuC family protein n=1 Tax=Campylobacter fetus subsp. fetus 82-40 RepID=A0RPQ7_CAMFF Length = 435 Score = 278 bits (712), Expect = 2e-73, Method: Composition-based stats. Identities = 113/447 (25%), Positives = 205/447 (45%), Gaps = 19/447 (4%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+ I++ VI + G I + F + K E + E + + ++ + Sbjct: 1 MEIYILLSLVIFVFGALIFYQFLKI--DKFKFELKLQNERFLNLQIKFDENRSELLNLEN 58 Query: 61 ECELLNNEVRSLQSINTSLEADLRE---VTTRMEAAQQHADDKIRQMINSEQRLSEQFEN 117 + + LN + + L+ L E + ++A Q D K R+ + + Sbjct: 59 KIQNLNEQKMEGEIEKAKLKTKLDEQINLNLELKARQDELDLKTREYFELKTK------E 112 Query: 118 LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNL 177 ++ + + + + E +++ L +L++PL+ +++ +++ + NL Sbjct: 113 MSQHLLNLNTKSLGENSQKILENLINPLKNEIEKYQK-------ESVNTSTIFKANFENL 165 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + + +A NL AL G+ K GNWGE+ L VLEASGL G Y QV ++ + Sbjct: 166 KTETKNIISQAKNLADALNGNKKVLGNWGEIQLDSVLEASGLINGKNYFKQVGYKDKDGN 225 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRK 297 + DV+V + K +ID+K +LV Y YFNA+ D + + ++ HI LL K Sbjct: 226 QKYLDVVVDFGESKKAIIDSKCSLVNYNAYFNAQSDEQKNQFAKALAGDIKKHIELLSSK 285 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 +YQ +T +Y+ MF+P + F AL++ + A + I + +P TLL+AL+T+ Sbjct: 286 EYQDY-DTKTYEYIFMFVPNDSIFYTALNQDSTIYEYAYEKGIFITTPLTLLMALKTVYI 344 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 WR NA +I A ++YDK R+F + + L+ + L G GN+ Sbjct: 345 CWRNLKSDENAMRILSEAGRMYDKFRVFTEQFDKLESQLNTVIKTVSSSKTTLYDGSGNL 404 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAV 444 L++ E + LG + + I+ E A Sbjct: 405 LSRFENLKKLGAKTNKNISKIYNESAE 431 >UniRef50_B4SN95 Putative uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia R551-3 RepID=B4SN95_STRM5 Length = 612 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 141/447 (31%), Positives = 250/447 (55%), Gaps = 6/447 (1%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 + K + + ++ Q + +A+ + +LQ+ + ++ Sbjct: 159 LQRERDTLKDQLANQDALAKVAAIGEREAREQLQGLKAQQVVAAERYETLQARFAAQSSE 218 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 ++ T ++ + ++ + LSEQF+ L+N I E + + E ++ SL++++ Sbjct: 219 YTKLKTELDEREASHARELANFEQQKASLSEQFKLLSNEILEAKAQALQESSKLSLSAVM 278 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 +P ++ ++ F+ +V+ +E ++ L E+ L+ LN Q+ EA L+ AL+G K Q Sbjct: 279 TPFQQSIETFKLEVRQIHHRETTQQGELRKELEQLKALNQQITAEAHELSTALRGQKKLQ 338 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 GNWGE+VL VL+ SGL+ +Y+ +VSI + R +PD +V LPQG+ ++IDAK++L Sbjct: 339 GNWGELVLENVLDRSGLQLDKDYQREVSITTEEGRR-RPDAVVYLPQGRHLIIDAKVSLN 397 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY RY NAEDD R+ AL+EH+ +V + I+ L +DY +LPGL + D V MFIP+E AF+ Sbjct: 398 AYARYVNAEDDLERKQALKEHVQAVASRIKELADRDYYKLPGLNSPDMVFMFIPIESAFV 457 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL L +A++NN+++ +PTTLL +L + LWRYE Q+++ +A+RA ++ K+ Sbjct: 458 EALKADETLFQQAIENNVLVATPTTLLTSLNIVRQLWRYEDQNKHTAALANRAEGVFRKL 517 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 F+ I + L+ A + Y +A +L SG+GN++ Q F+ L IK ++ A++ Sbjct: 518 NSFLASFERIKKGLESATEAYTKAEGQLVSGKGNLVKQVGEFKNLAPAIKAQLPAYFADK 577 Query: 443 AVSQDEEYRLRSVPEQPNDEAYQRDDE 469 A + +P + + EA R + Sbjct: 578 A-----ALEIDFIPSEQSIEALNRAAD 599 >UniRef50_B8GYE2 RmuC family protein n=3 Tax=Caulobacter RepID=B8GYE2_CAUCN Length = 429 Score = 278 bits (711), Expect = 3e-73, Method: Composition-based stats. Identities = 113/402 (28%), Positives = 186/402 (46%), Gaps = 5/402 (1%) Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 ++ L L + R + + +I + + + + + Sbjct: 29 QRRAAKAEAQAWLLTERLAQAEERHRLLEDQSATQIELIKAQAAQSANAIAEQLIKRADE 88 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 + + + L + L P+ E L F QV A+E L +I L + + Sbjct: 89 NAKSRERLAEARLEAQLKPVAETLAKFEAQVTAVEKARAEETGGLKAQITALLEASTATQ 148 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 EA L+ AL+ QG WGE L VLEA+GL ++++ Q S++++ R +PDV V Sbjct: 149 AEARKLSAALRRGAGVQGRWGEQTLRNVLEAAGLNSRFDFQEQFSVDSEEGRR-RPDVKV 207 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 LP G VIDAK +L A+ +A D+ RE+A+ H SVR H++ L K Y Sbjct: 208 TLPGGGVFVIDAKCSLNAFLEAQDATDEVLREAAMARHAQSVRTHMQGLSSKAYWDQFAG 267 Query: 306 R-TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 + D+V MF+P + ALDR PEL+ EA+ ++LV+PTTL + +A WR E Q Sbjct: 268 EGSPDFVAMFVPGDGFLAAALDRLPELMAEAMDRRVVLVTPTTLFALCKAVAYGWRAEDQ 327 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 ++NA +I + +LY ++ + A+G++L+ A Y Q + L S VL QA F Sbjct: 328 AKNAARIVEVGRELYKRVSVMGAHAGAMGKALESAVGKYNQFVGSLES---QVLTQARRF 384 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQR 466 L V+ + + P+ + +L++V + P Sbjct: 385 EDLSVDHEGKEIPEPPMVDQAVRPLTKLKAVGQSPTLTLGND 426 >UniRef50_C0QKG7 Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKG7_DESAH Length = 395 Score = 277 bits (708), Expect = 7e-73, Method: Composition-based stats. Identities = 82/336 (24%), Positives = 169/336 (50%), Gaps = 9/336 (2%) Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL---LSPLREQLDGFRRQVQDSFG 161 + Q S QF +LA+ F + ++ + + + P+R+ LD + ++ Sbjct: 49 AQALQANSTQFLDLADHYFAGYIKEARKELDIKGDEMIRSVDPVRQALDRYENRLGQMEL 108 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 + + +LT ++ + + + +E NL ++L+ +G WGE+ L +V E +G+ E Sbjct: 109 ERERAFGSLTAQLVEMARTQESLQRETGNLVKSLRL-PHVRGRWGEITLRKVAELAGMAE 167 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQ 281 ++ Q+ + + ++PD++V LP +++V+D+K+ L AY + R++ L Sbjct: 168 QCDFTEQLQKGSGKGA-LRPDMVVHLPGDRNIVVDSKVPLAAYLDALESTTKEARKAGLL 226 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIM 341 H V HI L K+Y + T ++V++FIP E F AL ++P+LI A++ ++ Sbjct: 227 NHARQVLAHINALSAKEYWRQFTP-TPEFVVLFIPGENFFSAALAQKPDLIETAIQKGVI 285 Query: 342 LVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQD 401 L +P TL+ L++++ W NA++I S+L+ ++ L + M+ +G+ +++A Sbjct: 286 LATPATLISLLKSVSYGWSQAKSHENAKEITRLGSELFQRISLMAESMNLLGKDIERAAS 345 Query: 402 NYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 Y + + + V+ A+ LG+ R I Sbjct: 346 TYNKTVGTIE---RRVMVSAKKLSNLGIAEDRNIPE 378 >UniRef50_D1BYP8 Putative uncharacterized protein n=1 Tax=Xylanimonas cellulosilytica DSM 15894 RepID=D1BYP8_XYLCX Length = 494 Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats. Identities = 119/447 (26%), Positives = 211/447 (47%), Gaps = 18/447 (4%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQS--EHWRAECELLNNEVRSLQSINTSL 79 + A + AE E + E + + Q+ ++ + R E R L + Sbjct: 31 ATRRSADIELARRHAEVEGLRNEAAGLRDQVQRAHDDADRRVAETRQEGDRRLAEARSEA 90 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH---SNRRVDEQNRQ 136 EA LRE+ EA +Q + Q S+QF +LA + + N Q Q Sbjct: 91 EARLRELKVDQEAEKQRFR---TIAGEALQANSQQFLDLAAQTLKASTVKNEEALVQREQ 147 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 ++ +L+ PL + L+ R +V + + TLT +R L N+++++ +L AL+ Sbjct: 148 AIKALVEPLSKSLEQVRTEVAQAEKSRIEGHSTLTEHLRQLSVANSELSKGTGDLVTALR 207 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 ++T+G WGE+ L RV+EA+G+ +++ Q S+ D + ++PD++VRL GK+VV+D Sbjct: 208 S-SQTRGAWGELQLRRVVEAAGMLRNVDFDEQASVSTDDGT-LRPDMVVRLAGGKNVVVD 265 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K+ + Y +D RE+ L H+ +R H+ L K+Y + ++V+MF+P Sbjct: 266 SKVAFLGYLEAQQTDDADYREARLDAHVRHLRKHVDDLAGKEYWEQFSP-APEFVVMFVP 324 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E A++R P L+ A + N+++ +P T+L L+T+A WR E + NAQ++ Sbjct: 325 AEAFLSAAVERDPGLMEYAARQNVIIATPMTMLALLKTVAYAWRQEALAENAQKVLTVGK 384 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +LY ++ ++ G ++ +Y + L S VL A L V + Sbjct: 385 ELYSRLVTMTGHITKTGNAIASVTKHYNSMIGSLES---QVLTSARRMVALDVVDE---- 437 Query: 437 PDLAEQAVSQDEEYRLRSVPEQPNDEA 463 E+ D R + PE EA Sbjct: 438 SRAIEELTGIDATPRPITKPELLAAEA 464 >UniRef50_D2Q6M6 DNA recombination protein rmuC-like protein n=16 Tax=Bifidobacteriaceae RepID=D2Q6M6_9BIFI Length = 447 Score = 275 bits (702), Expect = 4e-72, Method: Composition-based stats. Identities = 99/458 (21%), Positives = 200/458 (43%), Gaps = 24/458 (5%) Query: 11 IALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVR 70 + ++ + + + A + + Q E R L V Sbjct: 6 VFVMVLMVIVAALGAAAGFFAGRSRGQDMARDARTADLNEAKAQIEDGRRRIGDLTTSVA 65 Query: 71 SLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRV 130 ++ + L L + +++ AQ +I + +E+ + + R ++ + Sbjct: 66 QYRTQSEGLNQQLTYLKSQLAQAQSAEQTRIEREREKAAAEAERRQTESERQLREQSKVL 125 Query: 131 DEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 L+P+++ LD + +V +E L +++ L + A++ +E + Sbjct: 126 SA---------LAPVQKNLDALQEKVSQIEEGRKREMGALGEQLKGLGEQQARLDRETSS 176 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG 250 L+ AL+ +N+ +G WGE L ++E++GL E +++TQV + + +PD+++ +P G Sbjct: 177 LSAALR-NNRVRGAWGEAQLRNIVESAGLLEHVDFDTQVVVTDADGHTQRPDMVIHMPGG 235 Query: 251 KDVVIDAKMTLVAYERYFNAEDDYTRESA------LQEHIASVRNHIRLLGRKDYQQLPG 304 K + IDAK Y+R D ++E L+ H +VR H+++LG K Y Sbjct: 236 KTIPIDAKAPYADYQRACEIPDTASQEELTRKADLLRAHAKAVREHVKVLGDKAYWNAFS 295 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 D+V+ FIP E AL+ P L+ +A + L SP TL L+++A W+ + Sbjct: 296 -DAPDFVIAFIPNESLLQAALETDPTLMDDAFARKVALTSPITLWAVLKSVAYAWQQQSL 354 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + +A+ + D + +LY++ + + + +G ++ + Y L S VL A Sbjct: 355 TDDAKMLFDLSRELYERFAVLGERATKLGTAITRTVGAYNAFASSLES---RVLVTARKL 411 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 + V+ + I + E S+ + R + PE +D Sbjct: 412 QR--VDQGKVI--ESVEIIPSEKADIRELTAPETVDDA 445 >UniRef50_D1W7V4 RmuC domain protein n=4 Tax=Prevotella RepID=D1W7V4_9BACT Length = 460 Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats. Identities = 125/463 (26%), Positives = 229/463 (49%), Gaps = 21/463 (4%) Query: 6 MVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELL 65 +Y I LV AI F K ++L + + A +Q++ +AE + L Sbjct: 3 FIYLAIGLVVGAIVVFFLL----NGKLKKLETSNILSNQQLAHEQELG--TQLQAERDRL 56 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQ----QHADDKIRQMINSEQRLSEQFENLANR 121 E Q +++ +L VTT++E+ Q + + + Q + + EQF NLA R Sbjct: 57 QCEQAEQQQQLITIKLELERVTTQLESEQASHSKETEMRREQFEQQLKTVQEQFSNLATR 116 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 I E ++ R+ N +S+ L PL+ ++ ++ +Q + + ++ +L+ ++R + Sbjct: 117 ILEQTSERLKTTNNESMEHLTKPLKMNIEQLQQAIQHTNTETSKNTASLSQQLREMSLQT 176 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS---- 237 ++ A LT ++G NK QGNWGE +LT +LE+ G + G +Y+ Q ++ ++ + Sbjct: 177 QKIESTATRLTNVIRGGNKAQGNWGERILTDILESQGYKVGIDYDIQHTLTDEKGNAIKN 236 Query: 238 -----RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIR 292 RM PDVI+ P +DV+ID+KM++ AY +Y N E++ ++ + ++S+R Sbjct: 237 DDTGRRMIPDVILHYPNNEDVIIDSKMSIDAYYQYVNTEEEALKKKFAADLVSSIRTQAT 296 Query: 293 LLGRKDYQQLP--GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 L +KDY + + +D+V+MF+P E A LALD P++ EA + + S L+ Sbjct: 297 NLAKKDYSKYVHSPRKAIDFVIMFVPNEGALQLALDTDPKIWGEAFDKQVFITSQQNLMA 356 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 LR I WR Q+ N +++ A +L ++ FI IG+ +D +Y + K Sbjct: 357 ILRMIQIAWRQYAQTENQKKVFALAEELLKRVGEFIKRFDKIGKDIDMLHKDYGETYNKA 416 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 +GR +++ +A + LGV+ + + V E Sbjct: 417 YTGRQSIVQKANELKELGVKESANQPIPMTQPDVLDITEENED 459 >UniRef50_C0VT69 RmuC family DNA recombination protein n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VT69_9CORY Length = 355 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 84/303 (27%), Positives = 147/303 (48%), Gaps = 6/303 (1%) Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 + L + +DG ++ A+ L E+++L Q + +A + L L G + Sbjct: 43 NQLADAMDGISSRLHALDVSRAETSARLNQEMQHLTQTSLALAGKTDKLLTTL-GGPGLR 101 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 G WGE+ L RV+E SG+ + +++TQVS + + SR++PD++V L G+D+V+D+K+ L Sbjct: 102 GQWGEMQLQRVVELSGMIKHCDFDTQVSTTSHS-SRVRPDLVVHLAGGRDIVVDSKVPLS 160 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFL 322 AY D + L+ H +R H+ L KDY + T ++V+MFIP + Sbjct: 161 AYTDALEVNDSEEQAGYLRRHAYLMRQHVTQLSAKDYARGFA-HTPEFVVMFIPADSFLD 219 Query: 323 LALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKM 382 AL EL+ A NI++ +P+TL+ LRT+A W+ A +I ++LY ++ Sbjct: 220 AALKCDSELLEFAFSRNIIIATPSTLMALLRTVALGWQSADVEAKAGEIHALGTQLYRRL 279 Query: 383 RLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQ 442 + + +G LDK + Y + + S V A L ++ + + E Sbjct: 280 ATLNEHYAKLGSLLDKTVEQYNVMIGSMES---RVAVTARRLAELELDGGTQGELPVIEH 336 Query: 443 AVS 445 Sbjct: 337 LER 339 >UniRef50_A7H7P5 Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7H7P5_ANADF Length = 428 Score = 273 bits (697), Expect = 1e-71, Method: Composition-based stats. Identities = 103/391 (26%), Positives = 192/391 (49%), Gaps = 24/391 (6%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE------------ 132 E+ + A + A++K + ++ RLS+ F+ L+ S+ E Sbjct: 40 ELEATLAAERAGAEEKRALVEDARARLSDAFKALSADALRDSSASFLELARAALGRERAA 99 Query: 133 ------QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 + ++++ SLL+P+R+ L +++ LT ++R + + AQ+ Sbjct: 100 AEGELARRQEAIGSLLAPVRDALGRLDGELRAIERAREGAYGALTEQLRQVAEAQAQVRG 159 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 EA NL +AL+ + +G WGE+ L RV+E +G+ + ++E Q ++E D R++PD++VR Sbjct: 160 EAANLVKALRA-PQARGRWGELQLRRVVELAGMLDRCDFEEQATVEGDEG-RLRPDLVVR 217 Query: 247 LPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 LP G++VV+DAK L AY A DD R + L +H +R H++ LGRK Y + Sbjct: 218 LPGGRNVVVDAKAPLSAYLEAIEARDDGERRARLADHARQLREHVQQLGRKAYWERLRP- 276 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 ++ ++F+P E + AL+ P L+ + + +++ +PTTL+ L+ +A+ WR + Sbjct: 277 APEFAVLFLPGESFYAAALEADPTLLEASAERQVIVATPTTLIALLKAVAHGWRQAEVAE 336 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 NA+ +A +LY ++ + +G++L + Y +A+ L + VL A F Sbjct: 337 NAEAVAALGRELYKRIADLGGHFARLGRALGGTVEAYNRAVGSLEA---RVLPAARRFEA 393 Query: 427 LGVEIKREINPDLAEQAVSQDEEYRLRSVPE 457 L P+LA + + Sbjct: 394 LSAAPAEAELPELAPLDLVPRDVVAPELADP 424 >UniRef50_C3PFD8 DNA recombination protein n=8 Tax=Corynebacterium RepID=C3PFD8_CORA7 Length = 360 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 85/317 (26%), Positives = 157/317 (49%), Gaps = 6/317 (1%) Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIR 175 + + + S Q Q + L+PL + +D Q+Q+ A L+ +++ Sbjct: 29 RAYSAQSAQPSEEHRALQESQRRQAELAPLEKAMDRLGLQIQEIEEDRATSLAALSSQVQ 88 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 + + + +++ L AL+ N +G WGEV L RV+E G+R+ ++++QVS Sbjct: 89 AVTRTSTRLSDRTDKLVGALRSPN-VRGRWGEVQLERVVELGGMRKHVDFDSQVSAR-IN 146 Query: 236 RSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLG 295 S ++PD+++ L G+ +V+DAK+ L AY ED R L+ H +R+H++ L Sbjct: 147 GSLVRPDLVIHLAGGRSIVVDAKVPLSAYLDAMETEDPEERAGYLRRHAHLMRSHVQALA 206 Query: 296 RKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 KDY + T +V++F+P + AL EL+ A + N ++ +P+TL LRT+ Sbjct: 207 SKDYIEAFSP-TPQFVVLFVPADTFVDAALSIDAELLEFAFERNAVIATPSTLFALLRTV 265 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 A W++E S A+++ LY ++ + +G+ L++A + Y ++ L S Sbjct: 266 AVSWQHEEISDKAREVQRLGRDLYTRLNTLNEHYDKVGRGLERAVEAYNASLASLDS--- 322 Query: 416 NVLAQAEAFRGLGVEIK 432 V A + L V + Sbjct: 323 RVGVTARRLKDLDVPAR 339 >UniRef50_Q5GRS5 DNA recombination protein rmuC homolog n=10 Tax=Wolbachia RepID=Q5GRS5_WOLTR Length = 449 Score = 271 bits (693), Expect = 4e-71, Method: Composition-based stats. Identities = 94/439 (21%), Positives = 200/439 (45%), Gaps = 31/439 (7%) Query: 36 AEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQ 95 + +++ E + E + ++ L+ E+ ++ ++ Sbjct: 21 RKNKKLSGEKIKSANLEGNLFKLERELQETRQILQGKDKEIVDLKVSNAELEVTLQKERE 80 Query: 96 HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD------------------EQNRQS 137 +I + +E+RL+ F+ L+ + +N ++ + + Sbjct: 81 EKKKEIELLAKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSKLKETESNFKKRQAT 140 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 +N +++P++E+L+ F ++++ + L +I L + +L AL G Sbjct: 141 INEVVTPIKEKLEKFDSEIRELEKERVGAYEGLKEQIGALM-------NQTSSLANAL-G 192 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN-DARSRMQPDVIVRLPQGKDVVID 256 +G WGE+ L RV+E +G+ E ++ TQ S+ + + + ++PD+I+++P GK ++ID Sbjct: 193 KPHIRGKWGEIQLRRVVEMAGMVEYCDFFTQPSVIDKNKDNLLRPDLIIKMPSGKQIIID 252 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK+ L +Y + D ++ L++H +++ HI LGRK+Y T + V++F+ Sbjct: 253 AKVPLDSYLDAVSQNDLRIQKEKLKDHSLAIKKHINDLGRKEYWNQFE-NTPELVVLFLT 311 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E F AL+ +P LI ++ +++ +P TL+ LR IA W+ E + +A++I++ Sbjct: 312 GEGVFSAALEYEPALIEIGVEKKVIIATPITLIALLRAIAYGWKQEMIAESAKKISELGH 371 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 LY+++ ++ + +SL A D+Y + L + V A F LG+ K + Sbjct: 372 ILYERICTMGENFDNLRKSLKSAVDHYNKTAGSLET---RVFPAAREFNKLGIYTKNKEL 428 Query: 437 PDLAEQAVSQDEEYRLRSV 455 E + Sbjct: 429 NVAKELESLPRSLHAEELR 447 >UniRef50_Q1N9P4 DNA recombination protein n=2 Tax=Sphingomonas RepID=Q1N9P4_9SPHN Length = 493 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 112/456 (24%), Positives = 200/456 (43%), Gaps = 27/456 (5%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSIN 76 AI L + Q A Q+A EE I ++ + + ++++Q+ Sbjct: 52 AIAELAVEKERVAQAAVQIARHEEA---------HIAAAQRLDQVQAVAADRLQTVQAER 102 Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD----- 131 DL + + ++A + + +I + +++ +LS QF + R+ E + + Sbjct: 103 EVALRDLAALQSDIQARTRAFEQQITALKDAKDQLSAQFSEIGGRLLETAQTQFLTRADQ 162 Query: 132 ------EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMA 185 E++ L +LLSP+ L + + L I + Q+ Sbjct: 163 RFAQAHEKSEAQLKTLLSPVETTLKRYEEGLARVEKDRVGSYAELREAIAMVHAGQGQVR 222 Query: 186 QEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIV 245 +E L AL+ KT+G WGE ++E +GL +++ +VS+ + R++PD I+ Sbjct: 223 EETAKLVNALRAAPKTRGRWGEQQFKNLIETAGLSPFVDFQEEVSVTVEDG-RLRPDFII 281 Query: 246 RLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 RLP + +V+D K +L AY + D TRE L +H +VR H LGRK Y + Sbjct: 282 RLPGDQQLVVDVKCSLEAYLNAVESVDGPTRERFLVDHARAVRTHADALGRKAYWEQFA- 340 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 + D+V+M++P + AL+ EL A +N +++ P T L RT+A WR Sbjct: 341 KAPDFVIMYVPGDNFVTAALEADMELWERAARNRVIICGPATFLPLARTLAGHWRQAKLQ 400 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 A+++AD +LY+++ + +G L A DNY + + +VL FR Sbjct: 401 DQAKEVADLGKQLYERLATAATHLKRLGSGLSSAVDNYNKFVGSFD---RSVLPAGRRFR 457 Query: 426 GLGVEIKREINP--DLAEQAVSQDEEYRLRSVPEQP 459 L VE + + E + + R++P Sbjct: 458 DLNVETGGKDIEAVEPLELLIRDSQSDEARALPTAE 493 >UniRef50_D1PD09 RhuM protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PD09_9BACT Length = 438 Score = 270 bits (690), Expect = 8e-71, Method: Composition-based stats. Identities = 130/417 (31%), Positives = 225/417 (53%), Gaps = 17/417 (4%) Query: 37 EREEMVAELSAAKQQITQSEHWRAECELLN-NEVRSLQSINTSLEADLREVTTRMEAAQQ 95 + E + Q + +++ A E + + +QS+ + +E + + Q Sbjct: 19 KLMEAKSAGEEKTQLVAKAQVLAANIEQIKLHHASEVQSMKSQMENERLYAAKLRAESDQ 78 Query: 96 HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQ 155 K+ + QR++ + + +A + E NR ++ LL P++EQ F++ Sbjct: 79 QWAQKLESLKQEMQRMTIEQQKVAAEQLAAKQSALQENNRLQMDELLKPIKEQFADFKKS 138 Query: 156 VQDSFGKEAQERHTLT---------------HEIRNLQQLNAQMAQEAINLTRALKGDNK 200 V++S + + L + NL++ ++ +A NLT+ALKGD+K Sbjct: 139 VEESKTQNEVNKKELQNTFEATMKLFQQEQQQAVLNLKEQTEKIGSDAANLTKALKGDSK 198 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 QG+WGE+VL +LE SGLR+ E+ Q +++ +PDVIVR P+G+ VVID+K++ Sbjct: 199 MQGDWGEMVLETILENSGLRKNEEFFIQEYTKDEEGKNYRPDVIVRFPEGRSVVIDSKVS 258 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L AY AED+ +E ++ H SVR HI L KDY +L + +VLMFIP E + Sbjct: 259 LTAYSDALAAEDEAEQERLMKAHALSVRKHIDELAAKDYSKLVD-DAIGFVLMFIPNETS 317 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 ++ A+ +QP+L A + I+++SP+ LL+AL+ NLW+Y+ Q++N ++I A+ LYD Sbjct: 318 YIAAMKQQPDLSRYAYQKKIIIISPSNLLMALQLAYNLWQYDRQNKNVEKIVKTAADLYD 377 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINP 437 K+ F D ++G + + + +A K+L G GNV+ + E+ +GLGV K++I Sbjct: 378 KVAGFEDTFMSVGDLITRLSGTFDKAKKQLYDGTGNVMRRVESLKGLGVTPKKQIKE 434 >UniRef50_C9LJF3 DNA recombination protein RmuC n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LJF3_9BACT Length = 401 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 128/390 (32%), Positives = 212/390 (54%), Gaps = 11/390 (2%) Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + LQ ++ R++A + A + R + L ++F +A Sbjct: 23 TARAATDARSAELQRALQDMQTQKAVAEARLQAERVQAAETAR---RQAEELKKEFHAIA 79 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + + + + ++ ++L +LL P L F + + + I L + Sbjct: 80 SDLARTESESLQHRHTEALRALLHPFDADLKRFYDRFTE-------GNVAMRTNIEQLIR 132 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + ++A LTRAL+G+ K QGNWGE +L +LEASGLR G EY+TQV+++++ R Sbjct: 133 QTQTVGKQAEELTRALRGNTKVQGNWGEGILADLLEASGLRIGQEYDTQVNVKDEQRDNY 192 Query: 240 QPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 +PDV+V LP ++++IDAK++L AY Y NAED+ + ++EH+ SVR HI L K Y Sbjct: 193 RPDVVVHLPDKRELIIDAKVSLSAYVNYVNAEDEVEQARFMKEHLQSVRKHIAELSAKRY 252 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 +L + YVL+FIP E A++ A+ P+L EA + I+L++PT LL+AL+ NLW Sbjct: 253 DKLVPG-AIGYVLLFIPNEAAYVAAVSSAPDLSMEAYRKQIILINPTNLLMALQLTYNLW 311 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + E QS N + I A KLY+K LF + + +G +L +Y +A K+L++GRGN+++ Sbjct: 312 QSEKQSANVRDIYASAEKLYNKFTLFAESFAKLGDNLQTLTSSYEEAQKRLTTGRGNIIS 371 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 + E++R G+ R + L + DE Sbjct: 372 RLESWREKGLTPARSMPDALLDATADDDEA 401 >UniRef50_C3XHM6 Putative uncharacterized protein n=1 Tax=Helicobacter bilis ATCC 43879 RepID=C3XHM6_9HELI Length = 457 Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats. Identities = 129/458 (28%), Positives = 230/458 (50%), Gaps = 19/458 (4%) Query: 18 IGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINT 77 + + + K + + + K Q Q + E + + Sbjct: 2 LVLYRQRIKALRIKEALNEQAILLTNKHYEEKIQDLQHTLTTTKNEHVAQLESLKKEHIL 61 Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQR-----LSEQFENLANRIFEHSNRRVDE 132 SL L+E ++A + +++++ + Q ++++F ++ ++ E NR+ E Sbjct: 62 SLTNALQERENALKAQYTQKQELMQELLQTNQEKHTALMTQRFYEISEQLLEEKNRQFQE 121 Query: 133 QNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 + SL PL +++ F+ ++ + L EI++L++ + +++ +A NL Sbjct: 122 KQSDSL----KPLCDEIMRFKTEIAQHTKDNQERHIALNTEIKHLKEASLKISADATNLA 177 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 A++GD+K QG WGEV+L R+LE+SGL++ EY TQV ++N+A+ ++PDV++ LP + Sbjct: 178 NAMRGDSKLQGQWGEVILERLLESSGLQKDREYYTQVFVKNEAKEILRPDVVIHLPNNRF 237 Query: 253 VVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVL 312 VV+D+K++L AYER+FNA D +E L HI SV+NHI+ L K YQ LD+V+ Sbjct: 238 VVVDSKVSLSAYERFFNATDS--KEMHLNAHIESVKNHIKSLSLKQYQHCIEGGQLDFVI 295 Query: 313 MFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 MF+P+E A+ L +L ++ I+L +PTTL+V LR I ++W E + +N +I Sbjct: 296 MFMPLEGAYSAILQHDMQLFLDSYNKGIILAAPTTLMVILRLIHHIWSNEAKDKNITKIL 355 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA------MKKLSSGRGNVLAQAEAFRG 426 KL K F + M I ++L+ AQ+ Y +A L S N+ Sbjct: 356 QECVKLIKKFDGFTESMEKISRALETAQNAYEKAEIQIRGRGSLGSYIKNLDNYMSQITT 415 Query: 427 LGVEIKREINPDLAEQAVSQDEEYRL--RSVPEQPNDE 462 N + E ++++EE + ++PE DE Sbjct: 416 DTKPQTSPKNNETLESHINKEEEEHIQNDTMPETTEDE 453 >UniRef50_C2D8X6 Possible DNA recombination protein RmuC n=1 Tax=Atopobium vaginae DSM 15829 RepID=C2D8X6_9ACTN Length = 437 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 98/401 (24%), Positives = 187/401 (46%), Gaps = 14/401 (3%) Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSN-R 128 LQ+ + +A + E+ ++ A + ++ + +++LS +N R+ + SN + Sbjct: 43 EKLQTAINTHQAQMLELHSQNSALTAQNAELNNRLSDIKEQLSLVQQNEQLRLTKDSNEQ 102 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + +S+ P++ +LD + +V ++ L +++ L ++ Sbjct: 103 KHKLLVNESVIKAFEPVKAKLDDLQHKVMYMEEARKRDLGALDEQLKGLDSQQRRLDSVT 162 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L+ AL ++ +G WGEV L ++EA+GL E +++TQV + +PD+I+ LP Sbjct: 163 SSLSSALC-NSSVRGAWGEVQLKNIVEAAGLTEHIDFDTQVKLSTSDDKSFRPDMIIHLP 221 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYT------RESALQEHIASVRNHIRLLGRKDYQQL 302 K + ID+K Y R +D R L+ H A +R HI L +K Y +L Sbjct: 222 GNKTIPIDSKAPYNNYRRACEIDDSADEEALRRRTELLKAHAADLRGHINALSKKSYWEL 281 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 D+V+ FIP E AL +L+T A + L SP TL L+++A W + Sbjct: 282 FETN-PDFVIAFIPNEALLQAALAVDEDLLTYAFSKKVALTSPVTLWAVLKSVACAWHQQ 340 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 S NA+++ + + +L +++ D +SA+G++L A NY + L + VLA A Sbjct: 341 ELSDNARELFNLSQELCERLATLGDKVSAVGKNLSSAVKNYNSMVGTLET---RVLASAR 397 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 + L + + +L + + E + +++A Sbjct: 398 KMKQL--DGTKLTVQELDSEKTNVRELSASEFISTGASEDA 436 >UniRef50_C5VKL2 RmuC domain protein n=1 Tax=Prevotella melaninogenica ATCC 25845 RepID=C5VKL2_9BACT Length = 443 Score = 265 bits (678), Expect = 2e-69, Method: Composition-based stats. Identities = 113/450 (25%), Positives = 228/450 (50%), Gaps = 46/450 (10%) Query: 16 VAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSI 75 +I L+ + Q++ + + ++L ++ + + E + Sbjct: 14 ASIMLLWMKNKSTQEQKNAGEQLAVLRSQLETERKNVDERIAVVKE------------NA 61 Query: 76 NTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 LEA+ + + Q+ A+ K R L E+ N+A ++ + S +++ ++ Sbjct: 62 LQQLEAERKHGEQLRDELQKQAEAKNRL-------LQEEVRNMAAQMLDESREKMNTADK 114 Query: 136 QSLNSLLSPLREQLDGFRRQVQ--------------------------DSFGKEAQERHT 169 + L++LLSPL+E+L+ F + V + R Sbjct: 115 ERLDALLSPLKERLEAFNQTVTNNSKENTANKTEIKTTFEEAMKRLHAEQELTIKAMRED 174 Query: 170 LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQV 229 ++ L++ ++ +A +LT+ALKGD+K QG+WGE++L + LE GL +G +Y Q Sbjct: 175 QERAVKELREQTERIGNDAASLTQALKGDSKMQGDWGEMILDKTLEDCGLIQGQQYFLQE 234 Query: 230 SIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRN 289 + ++ + +PD ++ P + VIDAK++L AY+ ED RE L+EH++S++ Sbjct: 235 NYKDKDGNNFRPDAVIVFPNEERAVIDAKVSLTAYQAAIREEDATERERYLKEHVSSIKK 294 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 H+ L K+Y++L + +VLMF+P E + AL P ++ A + +I+++SP+ LL Sbjct: 295 HVDELSAKNYEKLVPG-CIGFVLMFVPYESGYSAALKTDPSILQYAYRKHIIILSPSNLL 353 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 +AL+ +W+ ++N ++I ++++L+DK F + +G +D+ Q ++ +A + Sbjct: 354 MALQLTHTMWQNFRMTKNVEEILHQSNELFDKFVTFAETFVKLGVDIDRLQQDFNRAKGQ 413 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 L+ G+GN++ + E + LG+ K++I L Sbjct: 414 LNEGKGNIVRRLEGLKTLGISPKKQIPESL 443 >UniRef50_Q6AA88 DNA recombination protein RmuC homolog n=3 Tax=Propionibacterium acnes RepID=Q6AA88_PROAC Length = 406 Score = 264 bits (675), Expect = 5e-69, Method: Composition-based stats. Identities = 93/384 (24%), Positives = 171/384 (44%), Gaps = 12/384 (3%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD 131 + + TS R+ + A +KI L+ QF+ L+ + N R Sbjct: 21 IAQLRTSQRIAEATSAARVATERLEAAEKIAT---DRDALATQFKALSAQSMADQNERAT 77 Query: 132 EQNRQSLN---SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + +++++ LL+P+ L+ R++ + + +L ++ + + +E Sbjct: 78 QSAQRTMSDAQRLLAPVSLALERLDRRLAEVEQERTDMTASLREQVAGVSTAGESLRKET 137 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L AL+ + +G WGE+ L R E +G+ E +++T + +PD+ V+L Sbjct: 138 ASLVAALR-KPQIRGAWGEMQLQRTAEVAGMLEHCDFQT-QQTTTAQGAPQRPDMTVKLS 195 Query: 249 QGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 + + +DAK L A+ +D ++ + VR HI L K Y + L + Sbjct: 196 GRRCIHVDAKTPLAAFLEAAQCDDAEEYDAQMARFARHVRTHIDQLSAKGYWRT-DLDSP 254 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 ++V+ F+P + AL P+L A + I+L SP+ L+ LRT+A WR E +R+A Sbjct: 255 EFVVCFLPSDALLQAALQEIPDLHEYANRRGIVLASPSVLIPMLRTVALAWRQEAVARSA 314 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 ++A L+ ++ ++ +G+SL Y A+ L + VL QA F LG Sbjct: 315 TEVAALGRDLHKRLGTLAGNLDKMGRSLTSTVRAYNSALGSLET---RVLVQARRFEHLG 371 Query: 429 VEIKREINPDLAEQAVSQDEEYRL 452 V +P E+AV L Sbjct: 372 VTADDIASPAPIEEAVRPLTSPEL 395 >UniRef50_C9PT19 DNA recombination protein RmuC domain protein n=1 Tax=Prevotella sp. oral taxon 472 str. F0295 RepID=C9PT19_9BACT Length = 432 Score = 263 bits (672), Expect = 9e-69, Method: Composition-based stats. Identities = 126/398 (31%), Positives = 218/398 (54%), Gaps = 20/398 (5%) Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR----LS 112 + L E + + + +L+ +E +QHA++ ++ ++ L Sbjct: 30 QIDELKKQLETEREYAKRMLDQADDNLQRANQNLERERQHAEEMRKESDQRWEQKLDSLK 89 Query: 113 EQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTH 172 + ++ A R + + NR ++ LL P++EQ F+R V +S + + L Sbjct: 90 KDMQSTAARELAAKQEELQKANRTQMDDLLKPIKEQFTDFKRAVDESKTQNEVNKTELQK 149 Query: 173 E---------------IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 + +L+Q ++ ++A NL+RALKG+NKTQG+WGE+VL +LE S Sbjct: 150 AFESTMKLFQQQQQQTVDSLKQQTERIGEDAANLSRALKGENKTQGDWGEMVLETLLENS 209 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRE 277 GL+ G E+ Q +++ + + +PDV+VR P+G+ VVID+K++L AY D++ R+ Sbjct: 210 GLQRGEEFFVQETVKTEDGATFRPDVVVRFPEGRSVVIDSKVSLTAYADAVATNDEHERD 269 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALK 337 L EH SVR H+ L K Y +L + +VLMF+P E +++ A+ +QP+L A + Sbjct: 270 RLLAEHAKSVRRHVDELSAKSYDKLVE-DAIGFVLMFVPNENSYIAAMKQQPDLSRYAYQ 328 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 I+++SP+ LL+AL+ NLW+Y+ QS+N ++I A+ LYDK+ F + + + L+ Sbjct: 329 KRIIIISPSNLLMALQLAYNLWQYDRQSKNVEKIVKTAADLYDKVAGFTETFTELESQLE 388 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 + N+ QA +L G+GNVL + + R LGV K+ I Sbjct: 389 RLARNFGQARGQLFEGKGNVLRRIDGLRALGVTPKKRI 426 >UniRef50_C1A518 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A518_GEMAT Length = 404 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 97/362 (26%), Positives = 172/362 (47%), Gaps = 3/362 (0%) Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQV 156 A + M +++ R L ++ H + S++ LL P+RE L + + Sbjct: 43 ARARSDAMNDADARARATEVALREQLARHEAEASLTERHGSVSELLVPIRETLSRYDAAL 102 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 + +A+ +T + + + E L++AL+ + +G WGE+ L RV E Sbjct: 103 GELGRAQARVAGQITERLDAVTLAGETLRHETQQLSQALRAPS-VRGQWGELQLRRVCEL 161 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR 276 +G+ ++E QV++ ++ +PD+IVRLP + +V+DAK L AY A D+ TR Sbjct: 162 AGMLAYCDFEPQVTVRGESG-VQRPDLIVRLPGDRRIVVDAKAPLSAYLEAMAAGDERTR 220 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 + L H A VR H++ L K Y D+V++F+P E F ALD P L+ AL Sbjct: 221 TARLAAHAAQVRAHVQQLAAKRYWAQFD-DAPDFVVLFLPGEAFFAAALDADPSLLEAAL 279 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 ++ ++L +PTTL+ L+ A WR E + A Q+A +L++++ +F + + +G+ L Sbjct: 280 EDRVLLATPTTLIALLKAAAYGWRQERVADEAAQVAALGRELHERLSVFDEQLVELGRGL 339 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVP 456 +A +Y +A+ L + G+ +P L + V E Y Sbjct: 340 QRAVLSYNRAIGSLERRVLVSARKLGTLSGVAAVDGSLTSPSLLDVQVRGSEGYDSEGTE 399 Query: 457 EQ 458 + Sbjct: 400 PE 401 >UniRef50_B4WDX5 RmuC domain protein n=5 Tax=Caulobacteraceae RepID=B4WDX5_9CAUL Length = 404 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 101/384 (26%), Positives = 181/384 (47%), Gaps = 6/384 (1%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 + L R++ ++ + + ++ + + R D+ R+ Sbjct: 27 QKAQGALSAALARIDLVEESRVTMGELLKAQAAQSAQVVADQMVSRATETFRAQDQLARE 86 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 + + L P+ + L F+ V A+E L ++ L ++ EA LT AL+ Sbjct: 87 RMAAQLKPVADTLTKFQEHVAALEKTRAEETGGLKEQLTQLMAASSATRDEARKLTEALR 146 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 G+ +G WGE VLEA+G+ +++ Q S +D + +PD +VRLP G VID Sbjct: 147 GNTGRRGRWGEQTCRNVLEAAGMAGRFDFTEQTSSADDEGRQNRPDFLVRLPGGGLFVID 206 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK+ L A++ E+ R L+ AS++ H+R L K YQ + D+V++F+P Sbjct: 207 AKVPL-AFDDEEGDEEARARSVGLR-IAASLKTHVRQLSSKAYQDQFKP-SPDFVVLFVP 263 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 + ALD P+L+++A+++ +++ +P+TL + +A WR E Q+ NA ++A Sbjct: 264 GDSFLSTALDHAPDLLSDAMESRVVIATPSTLFALCKAVAYGWRAEEQAANADKVAALGR 323 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +LY ++ + SA+G++LD+A Y Q + L S V+ A F L V+ + + Sbjct: 324 ELYKRLSVMGGHASAVGRALDQAVGKYNQFVGSLES---QVMVSARRFEDLQVDHEGKEI 380 Query: 437 PDLAEQAVSQDEEYRLRSVPEQPN 460 P LA+ R N Sbjct: 381 PALAQVETQPRTIARPELTAPTDN 404 >UniRef50_B2KBD1 Putative uncharacterized protein n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBD1_ELUMP Length = 402 Score = 262 bits (669), Expect = 2e-68, Method: Composition-based stats. Identities = 93/382 (24%), Positives = 178/382 (46%), Gaps = 15/382 (3%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 SLE L E E + +N+ + + ++ S + E+ +Q Sbjct: 34 ASLEVKLSEREQNEERLVNTFKALSAEALNTNNKSFLELAKTTLEKYQESAKGDLEKRQQ 93 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 ++NSL+ P++E L F ++ + + L ++ + L+ AL Sbjct: 94 AINSLVEPVKETLGKFEVKIGEIEKERKGAYEGLKEQM-------HMLLGTTQTLSNALT 146 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVID 256 + ++G WGE+ L +++E +G+ ++ Q S+ R++PD+IV+LP G ++V+D Sbjct: 147 SSS-SRGRWGELQLKKIVELAGMMNHADFVEQSSVSTQDG-RLRPDLIVKLPGGSNIVVD 204 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 +K + Y +D R + +E A +++HI+ L K Y + T D+V++FIP Sbjct: 205 SKAPVSKYLEAVELKDPSARHAKFKEFAAQIKDHIKSLSSKAYWEQFSP-TPDFVVLFIP 263 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 + F AL+ +P LI A+K +++ +PTTL+ L+ IA WR ++A++IA Sbjct: 264 GDSYFAAALEAEPALIENAVKEKVIVATPTTLISLLKAIAYGWRNVSVEQDAKEIAALGK 323 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR--E 434 +LY+++ + IG L+ A +Y Q ++ S VL A F+ V K Sbjct: 324 ELYERIATMSEHFYKIGSGLENATKSYNQTLRSYES---RVLVSARRFKDFKVSDKEIDV 380 Query: 435 INPDLAEQAVSQDEEYRLRSVP 456 + + + E+ + + Sbjct: 381 SSEHTIDVLPNYSEDNKKDLLD 402 >UniRef50_O84832 DNA recombination protein rmuC homolog n=12 Tax=Chlamydiaceae RepID=RMUC_CHLTR Length = 427 Score = 261 bits (668), Expect = 3e-68, Method: Composition-based stats. Identities = 92/400 (23%), Positives = 179/400 (44%), Gaps = 25/400 (6%) Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI 122 ++ ++ I LE + ++ + + + M +L+ + A + Sbjct: 33 KIFTKKLSRQHEIIRDLEHSKAILQMSLDTRR----SQEQLMEEFSHKLTSVSQAFARDM 88 Query: 123 FEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNA 182 S E+ + ++ S+L+P+ L F++ +++ K+A++R L ++ L Sbjct: 89 KTESQEFFSEKTQ-AITSVLAPVHNTLSAFKQNLENFETKQAEDRGALKEQLSQLLTAEQ 147 Query: 183 QMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPD 242 ++ +E LT LK ++G WGE+ L R+LE SG+ + +Y TQ + + S + D Sbjct: 148 KLERETQALTNILKH-PGSRGRWGEIQLERILEISGMLKYCDYSTQ--TVDSSESSSRAD 204 Query: 243 VIVRLPQGKDVVIDAKMTL-VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 +++RLPQ + +VIDAK Y +A+ + +++HI+ L K Y Sbjct: 205 IVIRLPQNRSLVIDAKTPFSEEYLTDNHADPTD--------LVKKIKDHIKTLKTKSYWD 256 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 ++ ++V++F+P E F A+ PEL+ A ++N++L SP TL+ L+T+ ++W+ Sbjct: 257 KFE-QSPEFVILFLPGESLFNDAIRCAPELMDYAGQSNVILSSPVTLMALLKTVTHVWKQ 315 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 E+ ++I LY +M D +G+ L +A +Y LS+ +L Sbjct: 316 ENLQNQIREIGQLGKDLYQRMHKLFDHFHKVGKHLGQAVHSYNDMSSSLSARVLPILRTF 375 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPND 461 + L + E VP ND Sbjct: 376 DKL-ELSSSHNK------IEALSQVSTLPHSPKVPYPEND 408 >UniRef50_C9RJN2 Putative uncharacterized protein n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RJN2_FIBSS Length = 482 Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats. Identities = 121/482 (25%), Positives = 222/482 (46%), Gaps = 32/482 (6%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 +I V + A++G+ IG LFA ++Q++A EM E++ + Q+ AE Sbjct: 1 MTIAVAIICAVLGIVIGVLFARNGNSQREAAARQANVEMEKEVAVLRSQLATETVKNAEL 60 Query: 63 ELLNNEV-------------RSLQSINTSLEADLREVTTRMEAA--------QQHADDKI 101 + + + SL + R+E+ Q +++ Sbjct: 61 KENTEKQLEMVKADAEKRIADERAAAAKSLADEKEASAKRLESMKLDMERVHQSSLNEQN 120 Query: 102 RQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFG 161 + QRL Q +N + + +++ E ++ L+SPL+E + + + D+ Sbjct: 121 ARFTEMSQRLYAQAKNSTEEMLKQREKQISESGHATMEQLVSPLKETIAKMEKTMNDTTR 180 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 + + +L ++ N + A L RA K D+K QG+WGE VL VLE+ GL E Sbjct: 181 AQTEANSSLKEVLKQSIDANDKTKNAANELVRAFKHDSKIQGDWGERVLEEVLESLGLEE 240 Query: 222 GYEYETQVSIENDARS---------RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED 272 G ++ Q ++ + + ++PDVIV L K+VV+D+K+++ A+ Y AE+ Sbjct: 241 GKHFDVQATLRDANGNVVRAEGNNAMLRPDVIVHLDPYKEVVVDSKVSMAAFMDYMQAEN 300 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLP--GLRTLDYVLMFIPVEPAFLLALDRQPE 330 R+ L++HI S+R H+ L KDY +T+D+V+MF+P A AL Sbjct: 301 PDERKVLLKKHIESLRKHVNELSVKDYSSYVKAPKKTMDFVVMFVPRAAALWTALAEDHA 360 Query: 331 LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMS 390 L +A + N+ + +L LR + WR Q++N Q++ + A+++ ++ +F+ +M Sbjct: 361 LWRDAFEKNVYIADEQSLYAMLRMVKMTWRQVQQAQNQQKVFELANEVLKRVGIFVKNMD 420 Query: 391 AIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY 450 IG +L KAQ+ Y + M KL +++ LG + + A+ E Sbjct: 421 EIGAALGKAQEAYNKGMAKLDDKGQSIVQSCRKLERLGAKQDSKNPLPPDVDAIEMQEIE 480 Query: 451 RL 452 + Sbjct: 481 EM 482 >UniRef50_B9XMP6 Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XMP6_9BACT Length = 472 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 109/456 (23%), Positives = 207/456 (45%), Gaps = 23/456 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHA------QQKAEQLAEREEMVAELSAAKQQITQSE 56 I+ + +G IGWL S + A + + E + + EL+ ++Q+T+ Sbjct: 22 LLIVGLLIGVALGCVIGWLAGSRRSAAAPQDARLENELRQQLSQRETELARQREQLTKLN 81 Query: 57 HWRAECELLNNEVRSLQSINTSL-EADLREVTTRMEAAQQHADDKIRQM-INSEQRLSEQ 114 A E + L + + E L+E + A + + + ++ ++ + Sbjct: 82 AACAAAEAQKHSAEKLLAEQREVHEHALKEAKATQDKALGDLRETFKALSADALKQTHPE 141 Query: 115 FENLANRIF---EHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLT 171 F LAN + + + Q ++S+ +L+ PL EQL +++++ S ++ + Sbjct: 142 FLRLANETLAKFQETAKGDLSQRQESIKTLVKPLEEQLKIYQQRLAQSETSQSSALGEVK 201 Query: 172 HEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSI 231 + L + ++ E + L R L + + +G WGE L RV+EA+G+ ++ Q+ Sbjct: 202 KHLETLALQSQSLSSETLQLRRVLSSN-QARGRWGEETLRRVIEAAGMSAHCDFSEQIQS 260 Query: 232 ENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHI 291 + PD+IVRLP + +++DAK+ + + + D R AL H ++ I Sbjct: 261 GDSK-----PDLIVRLPGDRIIIVDAKVPEIDFLTAIDNADTIKRTEALAAHAKKLKETI 315 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + LG +DY + LDYV++F+P E F AL+ +LI A IM+ +P +L+ Sbjct: 316 KALGDRDYPR-EFPNALDYVVLFLPAESLFSAALEGDHDLIVWAATKRIMIATPASLIAL 374 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LR+++ W+ QS NA+ IA+ A +LY ++ F + I + L++A + A+ Sbjct: 375 LRSVSVSWQQHAQSENARSIAEAAQELYARIAKFTEHFDNIRKGLERANSAFNDAVGSYD 434 Query: 412 SGRGNVLAQAEAFRGL--GVEIKREINPDLAEQAVS 445 V E L G K + + E + Sbjct: 435 ---RMVRPSGEKLSKLSGGTNGKELVEVEFLENRLR 467 >UniRef50_UPI000050FEF9 hypothetical protein BlinB_11076 n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FEF9 Length = 394 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 17/362 (4%) Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 +RL+ + D Q + + + PL ++ + +Q + ++ Sbjct: 38 ERLTRAETTSRILTNRTEDLEADAQMAGEITAAIGPLAASVNHLQENLQSQDRTQLEQIT 97 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 L +I +L Q N ++ + +L AL + +G+WGEV L R++E +GL ++ETQ Sbjct: 98 RLNTQIGHLSQQNLRLQESTGSLASALNSTTQ-RGDWGEVQLKRIVEYAGLLPHVDFETQ 156 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 VS R +PD+ V LP G ++IDAK L A +A D+ H ++ Sbjct: 157 VS-SVRDGKRHRPDMTVNLPGGGTIIIDAKTPLSARMGDADASDED--------HARALL 207 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 HI L K+Y + D+V+ F+P + A P++I AL N++L SP TL Sbjct: 208 RHIDALASKEYWKSFDT-APDFVVCFVPTDGLLSSAASTYPKMIDHALGKNVVLASPATL 266 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 LV L+T+A WR S +A ++ ++LY+++ + ++ +G SLD++ ++Y + + Sbjct: 267 LVLLKTVALNWRQADMSTSAAEVLKLGTELYERIGTLVTHVTRMGSSLDRSVEDYNRFVS 326 Query: 409 KLSSGRGNVLAQAEAFRGLGVEIKRE---INPDLAEQAVSQDEEYRLRSVPEQPNDEAYQ 465 L S L A F G+ D + VS +E R R + P Sbjct: 327 SLES---RFLVTARKFPSTGIVATELDAVAELDSRSRGVSAEELTRPRISGQDPFATQDP 383 Query: 466 RD 467 D Sbjct: 384 TD 385 >UniRef50_A3VRF3 DNA recombination protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VRF3_9PROT Length = 467 Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats. Identities = 111/435 (25%), Positives = 199/435 (45%), Gaps = 16/435 (3%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ 94 L ER+ + ++ + R + + + + L+A L E + + + Sbjct: 34 LRERDALRQAYDRCSRERDELLSARDDRDRERSRREEAERREAVLQARLEERERQFQQER 93 Query: 95 QHADDKIRQMINSEQR------LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQ 148 +D+ R + R L E N + E +S+ LL P+RE Sbjct: 94 DGFEDRFRSLSQRLLREASDGLLREAKANFDQQQLRAKAEA--EGYARSVGDLLKPMRET 151 Query: 149 LDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEV 208 L + + +++ + + R L+ EI++L + + EA L+ ALK KT+G WGE Sbjct: 152 LSRYEQGLKELREDQVKARGHLSGEIQSLAAQTSAVQAEARTLSAALKAGPKTRGRWGET 211 Query: 209 VLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYF 268 L V+E +G+ +++ Q + ++ R QPD++VRLP + V ID+K + + Sbjct: 212 TLRNVVEMTGMSPYCDFDEQFGVVDEDGRRKQPDMVVRLPGERMVAIDSKAPMAEWFTAV 271 Query: 269 NAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQ-LPGLRTLDYVLMFIPVEPAFLLALD 326 + D+ R++A H ++ H++ L KDY L LD+V++F+P E F A+ Sbjct: 272 ESGGDEDRRDAAHAAHAKALWTHVQQLAGKDYAAALKKDDALDFVILFVPAESFFTAAIG 331 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 +P L EA++ NI++ +P TL+ L++IA WR + NA+++A A LYD +R Sbjct: 332 ARPSLFQEAVEKNIVIATPATLVAILKSIAQSWRQQKAGDNAREVAALARDLYDSLRGTS 391 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL---GVEIKREINPDLAEQA 443 + +G+S+ + +Y + + S VL +A F G + E P L Q Sbjct: 392 TYLLQLGKSVAQTVKHYDSLVGNMES---RVLPRARRFADYEMPGTDKAIEGVPSLDLQP 448 Query: 444 VSQDEEYRLRSVPEQ 458 E P++ Sbjct: 449 RIAKSESDEPGSPQR 463 >UniRef50_C7NKI3 Uncharacterized conserved protein n=2 Tax=Micrococcineae RepID=C7NKI3_KYTSD Length = 390 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 85/381 (22%), Positives = 168/381 (44%), Gaps = 20/381 (5%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A +T++ ++ + + +E L E+ A + + Sbjct: 30 ARGARGSTQLAVLRERSRSLQERAERAETSLQEREAEAA--------------SSARVLE 75 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 ++P++ L+ RQV ++ + +R++ ++ +L +L + Sbjct: 76 AVTPVQRSLERMERQVTALERDRVEQFGEVGERLRHVAASTERLDAATTSLAGSL-ASSG 134 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 +G WGE L R++E +G+ +++ QV +D ++PD++V LP + VV+DAK Sbjct: 135 VRGTWGETQLRRLVEHAGMLARVDFDEQVRAVSDHDREVRPDMVVNLPDDRVVVLDAKAP 194 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 + A+ D+ R L +H ++R H+ L K Y RT +V+ F+P + Sbjct: 195 MTAFLTAQEV-DEADRPGLLTQHAKALRQHVDTLSGKAYWSAF-RRTPQFVVCFVPTDAT 252 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 AL P L +AL ++L SP T + LRT+A W+++ RNA+++ +L++ Sbjct: 253 LAAALQADPALYDDALAKEVVLASPATTMALLRTVALTWQHDTVERNAEEVLLLGRQLHE 312 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 ++ + +G+ L + ++Y Q + L S VL A F LG+ + + Sbjct: 313 RLATTAGHLDQMGRQLTRTVESYNQLVGGLES---RVLVSARRFTDLGLPGEELPHAPGV 369 Query: 441 EQAVSQDEEYRLRSVPEQPND 461 A L + ++PN+ Sbjct: 370 TAAARPLTAPELTARTDRPNE 390 >UniRef50_A9WPD8 RmuC family protein n=3 Tax=Micrococcaceae RepID=A9WPD8_RENSM Length = 378 Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats. Identities = 91/363 (25%), Positives = 169/363 (46%), Gaps = 14/363 (3%) Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 ++ + + + RLSE LA E S+ L+P+ E+L + Sbjct: 26 RRRQANLASDLNDMSDRLSEANAALAAAEAESRLLTAQSGENSSILKALAPVSERLGDVQ 85 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 RQV ++ L+ ++ + + + + Q NL +L+ + +G WGEV L RV Sbjct: 86 RQVTLLERDRVEQYGQLSQQLNDAKDADRLLLQTTQNLASSLRSTS-ARGRWGEVQLRRV 144 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 +E++G+ ++ QV +PD+IVRLP GK++++DAK+ L A+ + A + Sbjct: 145 VESAGMVAHVDFSEQVQQSGIDG-VQRPDMIVRLPGGKELILDAKVPLSAFLQAQEAGSE 203 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 +L +H +VR+HI L K Y Q + + V+ F+P E AL +L+ Sbjct: 204 RDAAISLNQHAKAVRSHIDALAAKKYWQGSPT-SPELVICFLPAESILSAALSADAQLLD 262 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 AL ++L SP +LL L+ +A WR + + +A+++ + +S+LY+++ + + +G Sbjct: 263 YALGKGVVLSSPISLLAVLKAVAYSWRQDVLTESAKELFEVSSQLYERLATLGEHVGKLG 322 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 S+ + + Y + L + VL A ++P+ D + R Sbjct: 323 ASIRSSVEKYNTMVGSLEA---RVLPSARRL--------NLLDPESLAAPAQVDVQPRHL 371 Query: 454 SVP 456 S P Sbjct: 372 SAP 374 >UniRef50_C7MET8 Uncharacterized conserved protein n=2 Tax=Bacteria RepID=C7MET8_BRAFD Length = 399 Score = 254 bits (648), Expect = 6e-66, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 153/330 (46%), Gaps = 6/330 (1%) Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L L+P+ L R + S L + L Q + LT AL+ Sbjct: 68 LQRTLAPITATLTQLERSLARSEAARIDAEGALRSHLSQLAQRAQSLETGTSALTAALRA 127 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR-MQPDVIVRLPQGKDVVID 256 +G WGEV L R++EA+G+ E ++ Q+ + +PD++V L + VVID Sbjct: 128 PT-ARGRWGEVQLRRIVEAAGMLEHVDFTEQLPGTRADGEKGQRPDLVVHLAGDRHVVID 186 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK + AY D + + H ++R+H+ ++ K Y + G T ++ ++F+P Sbjct: 187 AKAPMDAYLDATEETDPARAAARRKAHAKALRHHVGVVSSKAYWKALG-DTPEFTVLFVP 245 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 + AL+ PEL+ +A ++++ SP TL+ LRT+A+ WR + +R+A+++ D Sbjct: 246 SDGVLAAALETDPELLEDAFARDVVIASPATLVALLRTVAHTWRTDALNRDAREVLDAGR 305 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 +L+ ++ F + +G+SLD + + +A+ L S V+ A F LG+ Sbjct: 306 ELHHRLGTFTGHLGKVGRSLDSSVAAFNEAVGSLQS---RVMVTARKFEELGLSGTGLDE 362 Query: 437 PDLAEQAVSQDEEYRLRSVPEQPNDEAYQR 466 + Q ++ ++ + QR Sbjct: 363 VEQLTQRARTLDDAQIADLAGGAQASPPQR 392 >UniRef50_Q31BJ4 Putative uncharacterized protein n=6 Tax=Cyanobacteria RepID=Q31BJ4_PROM9 Length = 532 Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats. Identities = 91/424 (21%), Positives = 202/424 (47%), Gaps = 9/424 (2%) Query: 30 QKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTR 89 QK + E E+ +L + + + + + + + E + + +L Sbjct: 113 QKEKLSIENGELTEQLKSQEDESLRLDKEKNKLEEIQEINIEEKERLRVERENLSNKFAE 172 Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL 149 ++ + + + + + ++ L QF+ L+ ++ + S + + ++++ P +Q+ Sbjct: 173 IKEQLRSQESQNKFLEQAKADLLTQFQALSGKMLDGSRNALLKTTKETVTE---PFTKQV 229 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 + R+QV++ +++ L L++ + + A LT AL+ N +G WGEV Sbjct: 230 ETLRKQVEELSKDSSEKLGVLAQTTSELKEKSEDVRGAAQQLTSALRSPN-VKGRWGEVN 288 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 L R+LE GL +++ Q++I+ + ++PD ++ +P + +++D+K + +Y Sbjct: 289 LKRILEFVGLINYCDFDEQLNIQTEGGGSLKPDCVITIPGSRKLIVDSKAPIESYLDAIQ 348 Query: 270 AEDDYTRESALQEHIASVRNHIRLLGRKDYQQ--LPGLRTLDYVLMFIPVEPAFLLALDR 327 A D +E L EH+ VR+HI L +KDY + +D V+++IPVE A +AL+R Sbjct: 349 ATDSNIQEKLLTEHLRKVRSHIDQLSKKDYANNLSEIGQVVDGVILYIPVEGALSMALER 408 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 P L+ A + NI+L PT+LL L+ ++ + ++N +I A +L + FI+ Sbjct: 409 DPSLLEYAFEKNIILTFPTSLLAILKGLSMTIQQAEITKNINEIQKNAIELSKRFSNFIE 468 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 ++IG ++ + ++ +A+ ++ Q + F + + + + V + Sbjct: 469 KFNSIGSNITRLNKSFNEAVGSFE---RRLMPQGKRFAEMSGQNAELNLTEEVDILVKEL 525 Query: 448 EEYR 451 + Sbjct: 526 KTSD 529 >UniRef50_A5CT70 Putative uncharacterized protein n=4 Tax=Actinobacteria (class) RepID=A5CT70_CLAM3 Length = 459 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 99/455 (21%), Positives = 196/455 (43%), Gaps = 24/455 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQH----AQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 +++V VI L A+ L S A +A + A A + A ++Q+ ++E Sbjct: 5 IALLVGLVIGLAVGAVVGLAVSRARSGVDAPGRAAEAARLAAAEATVQALREQLDRTERL 64 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 E ++ + R++A + H ++I Q + L + + Sbjct: 65 AEE-----QVAQTTAQFAERAQTQDALHRERLDAQESHLREQIGQQEDRIAELQTRLREI 119 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + + LSP+ E L + +V + + Q+ L+ ++R+ Sbjct: 120 ------QRAEVARTEEDGRVLTALSPVAESLKQVQAKVHELEEQRRQQHGELSEQLRSAT 173 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 + ++ A L AL+ ++ T+G WGE L V+EA+GL +++ Q S+ Sbjct: 174 EAEERLRATAETLASALRSNS-TRGVWGETQLRSVVEAAGLIHRVDFDVQTSVSTAQG-I 231 Query: 239 MQPDVIVRLPQGKDVVIDAKMTLVAYERYFN------AEDDYTRESALQEHIASVRNHIR 292 +PD++V LP GK++ +DAK AY + R++ +++H+ +VR+HI Sbjct: 232 GRPDMVVHLPGGKNIAVDAKAPFTAYLEASAIPASATGSEGARRDALMKQHVQAVRDHIT 291 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 LG + Y + + + V+ FIP E AL+ P ++ A + L SP TL L Sbjct: 292 ALGSRAYWEGLDA-SPEMVIAFIPSESLVSSALEADPSIMEFAFSRRVALSSPVTLWSVL 350 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 +T+A W+ E + +A+Q+ D + +L+ ++ + ++ +G+SL A +Y + + L Sbjct: 351 KTVAFSWQQEVLTEDAKQLFDLSRELHARLATSGEHIAKLGRSLTGAVGDYNRVVGSLER 410 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + V E + + + Sbjct: 411 QVLPTARRLTRLDESKVIGTLEPLEATTRELTADE 445 >UniRef50_UPI000038E538 hypothetical protein Faci_05710 n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E538 Length = 384 Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats. Identities = 76/325 (23%), Positives = 161/325 (49%), Gaps = 8/325 (2%) Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFR 153 + + + I SE R +A + R E LN L+ PL++ L ++ Sbjct: 36 EDKLKASMHEFIESESRNLLNTGTIAFKNALEIERSERENTGLKLNGLIEPLKDSLKTYQ 95 Query: 154 RQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +++ + E L + L + + + I L+ ALK + +G WGE+ L R Sbjct: 96 TYIENIERERKSESGALKDNLDTLSRKITDLEHDTIKLSGALK-NPSIRGKWGEITLRRT 154 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDD 273 +E +G+ ++ Q E+ +PD+I++LP + +V+D+K+ L Y + N E+D Sbjct: 155 VEIAGMTPYCDFIEQAVSED---RLTKPDMIIKLPNRRTIVVDSKVPLSGYFEHMNGEED 211 Query: 274 YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT 333 ++ L +++ + +H+R L K Y + ++D+V+MF+P+E L + +PE+I Sbjct: 212 ---KTFLDKYMLAFNSHVRDLASKKYWEKFDG-SVDFVVMFLPMESLLSLVMSNKPEIIE 267 Query: 334 EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIG 393 +A+ +++ +P TL+ L T+ W+ + N + + + Y+ M+ F+ D++ Sbjct: 268 DAISKKVIIATPVTLISLLLTVHMGWKDINTVENFNGLIAKIKEFYNNMQTFVGDLNETS 327 Query: 394 QSLDKAQDNYRQAMKKLSSGRGNVL 418 ++L K+ D++ + + + + V+ Sbjct: 328 KNLSKSIDSFNRMTRDIKNKLEPVI 352 >UniRef50_Q6L1W6 Hypothetical DUF195 protein n=1 Tax=Picrophilus torridus RepID=Q6L1W6_PICTO Length = 355 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 75/315 (23%), Positives = 158/315 (50%), Gaps = 9/315 (2%) Query: 112 SEQFENLANRIFEHSNR---RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERH 168 + + + ++ E + ++E+NR + +++ P+ E L +R ++ + + Sbjct: 43 QKILDENSQKLIEKNTEVISNINEKNRLEIKNIMEPVYESLKSYREYIERVENERKLDSG 102 Query: 169 TLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQ 228 +L I NL + ++ + L ALK + +G WGE+ L R++E +G+ ++ Q Sbjct: 103 SLKASIENLSKYLNEIDHDTRALANALK-NPSIRGKWGEITLRRIVEIAGMNPYCDFSEQ 161 Query: 229 VSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVR 288 V+I N+ +PD+++ LP G+ ++ID+K+ L +Y Y + ++ + L+ +I Sbjct: 162 VTINNE----YRPDMVINLPNGRKIIIDSKVPLNSYLNYVDETNEKLKLDHLKRYIDDFN 217 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 NH+R L K Y Q ++D+V+MF+P+E + ++R E + A ++++ +P TL Sbjct: 218 NHVRTLESKRYWQNLEG-SVDFVIMFLPLESLLSIIMERSRETVENAFSRHVIVSTPVTL 276 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMK 408 + L T+ W + S N + + ++ F+ D IG +L KA ++Y++ Sbjct: 277 ISLLMTVHAGWNEKELSSNINNLMLKIKDFRSRLDTFMKDYDEIGNNLGKALESYQRTKG 336 Query: 409 KLSSGRGNVLAQAEA 423 L ++ + E Sbjct: 337 SLERRLEPIMREFER 351 >UniRef50_B8HC96 Putative uncharacterized protein n=2 Tax=Actinomycetales RepID=B8HC96_ARTCA Length = 428 Score = 243 bits (619), Expect = 2e-62, Method: Composition-based stats. Identities = 100/391 (25%), Positives = 175/391 (44%), Gaps = 41/391 (10%) Query: 93 AQQHADDKIRQMINSEQRLSEQFENLAN-----RIFEHSNRRVDEQNRQ--SLNSLLSPL 145 +++ RLSE A R+ NR + E Q S+ L+P+ Sbjct: 43 LRKNTHGVEADFDAVSARLSEVSAQFAAADAERRLLAAQNRELGEARSQDGSVLRALAPV 102 Query: 146 REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 E+L ++QV ++ L +++ + + Q+ + L AL+ ++ +G W Sbjct: 103 AEKLTAVQQQVALLERDRVEQYGQLAQQLQEARLSDEQLMRSTHALESALRSNS-ARGQW 161 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYE 265 GEV L RV+EA+G+ ++ QV + + ++PD++V+LP K +V+DAK+ L AY Sbjct: 162 GEVQLRRVVEAAGMLRHVDFVEQVH-SAGSDTTVRPDLVVQLPGEKILVVDAKVPLSAY- 219 Query: 266 RYFNAEDDYTRESALQEHIASV---------RNH--------------IRLLGRKDYQQL 302 A++ L +H + R+ + LG K Y + Sbjct: 220 --LEAQEMGASAVHLAQHADARPAALSGSDRRSQQALLAAHAKALRAHVDALGNKRYWDI 277 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 PG + + V+ FIP E AL+ L+ AL N++L SP TLL L+++A WR + Sbjct: 278 PG-NSPELVVCFIPAESILAAALEADAGLLDHALSKNVVLASPGTLLAVLKSVAFTWRQD 336 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + NA+++ D A +LYD+M ++++ +G SL + D Y + L + VL A Sbjct: 337 VLTDNARELFDLARQLYDRMGTLGENVTKLGSSLKTSVDRYNSLVGTLEA---RVLPTAR 393 Query: 423 AFRGLGVEIKREINPDLAEQAVSQDEEYRLR 453 L + ++P E L+ Sbjct: 394 KLNTL--DEAGLVSPAPVEVTPRALAAPELQ 422 >UniRef50_C0W801 RmuC family protein n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W801_9ACTO Length = 414 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 93/402 (23%), Positives = 171/402 (42%), Gaps = 26/402 (6%) Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 R +A+ D + + + E L+ R S+ L Sbjct: 23 YAVAVARYASARASGRDGAARAQTEAAQWRARAEELSARA---QLAEERADRDGSVLRAL 79 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 +P+R QL+ +V+ + A + +L ++R Q ++ +L AL+ + ++ Sbjct: 80 APVRSQLEQVGARVEQMERQRAGQHASLAEQLRARAQAERELLVTTSSLASALRSRS-SR 138 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIEN-----------DARSRMQPDVIVRLPQGK 251 G WGEV L RVLE SG+ ++ Q S+ + + +PDV++ LP G Sbjct: 139 GLWGEVELARVLEISGMMPHVDFSEQRSVGSVLASRSSATASSGTTASRPDVVIHLPGGG 198 Query: 252 DVVIDAKMTLVAYERYFN-----AEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 + +D+K + AY R A D R + ++EH ++R+H+ L + Y + G Sbjct: 199 YLALDSKAPMDAYLRACGVEGEPASADTERRTLMKEHAKALRSHVDQLAARRYDRALGS- 257 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 + + V++F+P EP ALD P L+ AL+ + L SP +LL LR A W + Sbjct: 258 SPELVVLFVPAEPVLAAALDADPTLMDHALEQGVALTSPASLLSLLRVCATAWARTAVNE 317 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 +A+++ + LY+++ + A+G +L ++ Y + + + S +L A +F Sbjct: 318 DARELLELGRTLYERLGTVAGHLDALGGALTRSVSAYNRTVASMES---RLLVTARSFET 374 Query: 427 LGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDD 468 L + + + V L E + DD Sbjct: 375 LASSVPSPRSICPDDAQVRSFATPEL--TVESGTHGRGESDD 414 >UniRef50_C5CBX5 Uncharacterized conserved protein n=1 Tax=Micrococcus luteus NCTC 2665 RepID=C5CBX5_MICLC Length = 419 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 94/390 (24%), Positives = 158/390 (40%), Gaps = 36/390 (9%) Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 R + A + ++ + A + S L+ Sbjct: 37 RRAQAELAALRTEHQGAREELAAARAEQRALTAARAEDAERQRAES-------QVMSTLA 89 Query: 144 PLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 PL ++L + QV A + L ++R + + + +L LK + +G Sbjct: 90 PLGQRLAALQEQVSVLERDRASQFGRLGEQLRAAAATDRDLLNQTTSLMATLKSTS-ARG 148 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTL-- 261 +WGE L RV+EA+G+ ++ Q ++ R++PD++V LP GK + +DAK + Sbjct: 149 HWGEAQLRRVVEAAGMLHHVDFTEQATLSGRDGERLRPDLVVSLPGGKAMAVDAKAPIGD 208 Query: 262 -------------VAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 AYER R++ +H A+VR H+ L K Y + Sbjct: 209 ALAAEALADEPGEEAYER---------RQALAAQHAAAVRRHVDQLSAKSYWAGLE-HSP 258 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 + VL F+P E ALD P L+ A N+ LV+P +LL AL+++A WR + + NA Sbjct: 259 ELVLCFLPAESLLAAALDADPGLLDHAFSRNVALVAPVSLLTALKSVAYAWRQDTLAENA 318 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 + A LY+++ + +G SL A D Y Q + + S VL A R + Sbjct: 319 HTVVASAKDLYERLGTLGTHLDRMGGSLKTAVDRYNQLVGNVES---RVLPAARRLREVD 375 Query: 429 VEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 + + E A L + E+ Sbjct: 376 PGLAPTPDIRTLESAPRPLAAPELVTGVEE 405 >UniRef50_B3DVY7 Nuclease of restriction endonuclease-like fold, RmuC family n=1 Tax=Methylacidiphilum infernorum V4 RepID=B3DVY7_METI4 Length = 385 Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats. Identities = 87/388 (22%), Positives = 182/388 (46%), Gaps = 28/388 (7%) Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ----- 133 +L+ +EA + ++KI + +++ L F++LA+ + E +++ + Q Sbjct: 6 QNKNLQLKIASLEAEKLAQEEKITWITKTQETLKTMFQSLASEVLESNSKSILGQVTFHF 65 Query: 134 -------------NRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 ++ + +++SPL + L+ Q+Q+ K +L+ I L + Sbjct: 66 HSLFENLKTDWSLKKEEIKNIVSPLEKGLEALDNQLQNLESKREGAYSSLSSHITLLAEA 125 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 ++ + A L ++LK +G+WGE L R++E +G+ E Y Q E+ + Sbjct: 126 YKELHRSATRLEQSLKS-PLVRGSWGEYQLQRLVEMAGMEEHISYLNQPLTEDK-----R 179 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 D+I+ +P + + +DAK + AY +A+++ R+ L+EH+++V+ IR L +K+Y Sbjct: 180 ADMIIFIPGNRKIFVDAKTPMRAYLEAVSADNEILRKEKLKEHLSAVKERIRELSKKEYG 239 Query: 301 QLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWR 360 + +YV+MF+P E L+ + P + AL+ N++L SP L L+ IA W+ Sbjct: 240 RTQ-TEAFEYVIMFLPSEGLLSLSFEADPGIFQYALERNVLLASPINFLALLKAIAFGWQ 298 Query: 361 YEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQ 420 + + ++IA+ KLYD + ++ + ++ + D + +A S + ++ Sbjct: 299 QQRVTEEVEKIAEEIKKLYDSFIELLTTLTKMRKAFENTIDLFNKAS---SICQEKIIPS 355 Query: 421 AEAFRGLGVEIKREINPDLAEQAVSQDE 448 + G K + E + Sbjct: 356 TRKIQSTGSFSKDIPEVNPIETTPKNRD 383 >UniRef50_C1A7Y6 Putative uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A7Y6_GEMAT Length = 496 Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats. Identities = 99/441 (22%), Positives = 177/441 (40%), Gaps = 16/441 (3%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 + + AV+ V I ++ A + AER M EL+ A+ + + RA Sbjct: 26 IGIITGLTAVLVAVVGIIAVRVLKHRTKTATAHRDAERVRMETELAEARAREDAAILERA 85 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 + E SL + + EA + + + E+ + + Sbjct: 86 QLE------ASLHATREAAEAQRAALQQLSSELGDRLLQQQATAFQATTAALERRASSES 139 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 + + + L+ L P+ E L + + A E L +++L Sbjct: 140 EAIRAAYEAATAERNERLHVELQPVHETLQRLADTSVATDTRSAAEFSRLVTLVQSLNDE 199 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 + +E L L+ ++ +G +GE L R LEA+GL+E Y Q ++ + + Sbjct: 200 HRAHREETRKLQDVLRV-SQVRGRYGEWTLQRALEAAGLQERVHYVMQPALRGEEG-LFR 257 Query: 241 PDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQ 300 PD ++ LPQG+ +V+D+K L +A + + L H ++R HI L K Y Sbjct: 258 PDAVLLLPQGRAIVVDSKAPLQHLLDAQHASSQSEKSALLDRHAKALRLHIDQLASKSYP 317 Query: 301 Q-----LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTI 355 +P LD VL+F+P + A R P+L+ A + LVSP +LL+ L + Sbjct: 318 ARVSAVVPDRVLLDGVLLFVPADAVLDAAFRRDPKLLQHAASQQVHLVSPASLLIVLSAV 377 Query: 356 ANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG 415 LWR + + + A +I + L ++ + + + + ++L Y L S Sbjct: 378 EQLWRQDGRDQRAAEIEKIGADLLGRLGVVLGHVCHVQRALSDCVTAYNALTGSLES--- 434 Query: 416 NVLAQAEAFRGLGVEIKREIN 436 +L A LGV + I Sbjct: 435 RLLPIARRMEELGVRTREAIP 455 >UniRef50_C5F2G6 RmuC family protein n=2 Tax=Helicobacter RepID=C5F2G6_9HELI Length = 451 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 103/459 (22%), Positives = 204/459 (44%), Gaps = 37/459 (8%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQL--------AEREEMVAELSA----AKQ 50 + + + ++ V W +++ + L + ++ + A+L +Q Sbjct: 1 MLVSISVFLFVIAVVAVWFAVQNIALRKERDSLVVQIDTAQSTKQSLEAKLIETSKCHQQ 60 Query: 51 QITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQR 110 + ++ +++ +L+ + L S T + D + Q + + + EQ+ Sbjct: 61 TLRENAIMQSQLDLIQKDKEILTSQLTKITQDYHFILQEKAKIQSKLESTATLLESLEQK 120 Query: 111 -------LSEQFEN----LANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDS 159 L E+FE + + + + + E +++ L+S+ +P+RE + ++ ++ + Sbjct: 121 YSQNLVILKEEFEKSMQLQSQSMIQQNKLHLLEDSKKILDSVFNPVRESMKEYKDKLVAN 180 Query: 160 FGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGL 219 K L I+N+ + + Q A L + LKGD K +GN+ E+ L VLE SGL Sbjct: 181 EIK-------LEANIKNMFAYSQAIGQNADKLAQILKGDKKIRGNFAEIQLKNVLEHSGL 233 Query: 220 REGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 G +Y+ Q N S +PD +V L + K ++ID+K L N + E+ Sbjct: 234 VAGEQYKLQEHF-NFEGSGYRPDAVVYLDKHKSIIIDSKFPLPN-----NFSFESLNENV 287 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 QE + +++N I L +K Y T ++VL+FIP + LAL + A Sbjct: 288 CQEIVRNLKNRIDELAKKPYAN-FEAHTYEFVLLFIPYQNILDLALSVDSGIYQYAYSKK 346 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 + L +P TL +AL+TI W Y + + K YDK +D + +++ Sbjct: 347 VYLTTPQTLFMALKTIEVSWVYIQSDEKVMKAFEEIGKFYDKFVGVAEDFERLKGLIERL 406 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + KL SGRG++ ++ E+ + LG + ++++ + Sbjct: 407 GKQSDELDSKLLSGRGSLASRFESLKKLGAKTAKKLSIE 445 >UniRef50_Q83MS0 DNA recombination protein RmuC-like protein n=2 Tax=Tropheryma whipplei RepID=Q83MS0_TROWT Length = 482 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 94/403 (23%), Positives = 184/403 (45%), Gaps = 13/403 (3%) Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD 131 L N L + ++ T + AA+ H I+ + E L E + + + ++ + Sbjct: 72 LSKKNQELSDQVIQLKTELLAARAH---GIQLEKDKEYLLKELSKTVHLQNQKNEEESLI 128 Query: 132 EQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 + + + L + LD +++ + + + E+ + +++ +++ + L Sbjct: 129 KTQLAPVKESVKQLTQTLDLLKKEQTQTMVRLESQIKETRTELDDNRKITRELSVDTRAL 188 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 T L+G K G WGE L +L+ SG+ G +Y+ Q +++ SR +PD I+ P G Sbjct: 189 TETLRG-TKHAGIWGEQRLRELLQNSGMIRGRDYDLQPILDD---SRYRPDAIIHAPGGL 244 Query: 252 DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 ++VIDAK L A+ + E + L++H SVR HI LG++ Y + Sbjct: 245 EIVIDAKAPLDAFLASVDCESTSETQKLLKKHAQSVRKHIAELGKRAYHNKIDG--PKFT 302 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 L+F+P E A++ +L++ A K+NI +VSP L ++TI L ++ + +A++I Sbjct: 303 LLFLPTEGLLRSAVEEDSDLLSYAFKSNIAIVSPVNLWAVVQTITYLCTQQNLAHSAKEI 362 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 L ++ +S +G+SLDK+ + + + + + N++ LG EI Sbjct: 363 VRLGESLIANVKSIAQHISELGKSLDKSIMYFNRTVGAVEN---NLIRTLGKINTLGNEI 419 Query: 432 KREINP-DLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQ 473 + + + Q D + R + ND +Y +Q Sbjct: 420 ELQDCKFEAVRQFAKLDAKNDARKNDARKNDARKNDAHKYTEQ 462 >UniRef50_B9KDZ1 DNA recombination protein RmuC n=2 Tax=Campylobacter RepID=B9KDZ1_CAMLR Length = 446 Score = 228 bits (580), Expect = 5e-58, Method: Composition-based stats. Identities = 105/453 (23%), Positives = 205/453 (45%), Gaps = 21/453 (4%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAEC 62 ++ A + +V +A W Q + K E L + +V + A ++ ++ Sbjct: 1 MENILIAFLVVVILAFIWYVFKSQKQKAKMEFLNQNN-IVLQNQLANLELEKTTLMEKNS 59 Query: 63 ELLNNEVRSLQSINTSLEADLREVTTRMEAAQ----QHADDKIRQMINSEQRLSEQFENL 118 +LL+ ++ L S N +LEA L + + + + + + +L E+++ Sbjct: 60 KLLDEKILYL-SKNEALEAKLAQKEQTQQELLNIHLKERANLKEEYTQTLIKLEEKYKQS 118 Query: 119 ANRIFEHSNRRVDEQNRQSLNS--------LLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 + + + + +QN LN L E ++ V++ + +L Sbjct: 119 LAELKQELEQNLQKQNANVLNQNKLMFNDDAKKILEEIFLPVKKSVKEYNERLNSNEVSL 178 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 I N+ + + M + A L + LKGD K +GN+ E+ L VLE SGL EG +Y+ Q Sbjct: 179 KTHIDNMFKFSQNMTENADKLAKILKGDKKIRGNFAELQLKSVLENSGLVEGVQYKLQER 238 Query: 231 IENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNH 290 +++ PD +V L + K ++IDAK +L + + + ++ + ++++ Sbjct: 239 FQDE-GKTYIPDAVVFLDKQKSIIIDAKFSLPS-----DFNFEDISQNTCLDLAYNLKSR 292 Query: 291 IRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLV 350 I L +K Y Q T ++VL+FIP + L L+ E+ A K + L +P TL + Sbjct: 293 IDELAKKPYMQY-DKHTYEFVLLFIPYQNILDLILNVDLEIYQYAYKKKVYLTTPNTLFM 351 Query: 351 ALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKL 410 AL TI W+ + N + D K +DK +DD I +++ + N KL Sbjct: 352 ALNTINISWKNIQSNENILKAFDELGKFHDKFAGVLDDFEKIKENIKRLNTNVDNMQTKL 411 Query: 411 SSGRGNVLAQAEAFRGLGVEIKREINPDLAEQA 443 + G GN+ ++ + LG + ++ I ++++++ Sbjct: 412 THGSGNIASRVIKLKELGAKTQKLIKCEMSDES 444 >UniRef50_D0WPY8 Ribosomal protein S9 n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WPY8_9ACTO Length = 410 Score = 227 bits (578), Expect = 8e-58, Method: Composition-based stats. Identities = 84/361 (23%), Positives = 163/361 (45%), Gaps = 15/361 (4%) Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ--NRQSLN 139 D R +++ A+ + Q + + + + E N + ++ N Q+L Sbjct: 29 DRRRSQNDEDSSHHRAELGLAQADATRWQAAAAEATGRADVLERENVELSQRARNEQALL 88 Query: 140 SLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 ++ PL +L +V K+A + + ++ + ++A+E +L AL Sbjct: 89 RMIEPLSARLKDMTERVASMQAKQAAQDAAVREQLSATASAHRELARETTSLRTALTS-V 147 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDAR---SRMQPDVIVRLPQGKDVVID 256 ++G WGEV L R++E++G+ + ++ Q ++ S +PD+ V LP G + +D Sbjct: 148 SSRGTWGEVELRRIVESAGMLKHTDFSEQQNVATTNGAGASAARPDMTVHLPGGAHIAVD 207 Query: 257 AKMTLVAYERYFNAE-----DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 AK+ L A + E + R + EH +VR H++ L ++DY + Sbjct: 208 AKVPLTALLKAQEIEGTDQFSEARRSELVAEHARAVRAHVKELAKRDYPAEFPG-SPRIT 266 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 +MF+P E AL P ++ +ALK+ + +P++LL LR++A +W + AQ+I Sbjct: 267 VMFLPTESLLSQALADDPTILEDALKSGVAPATPSSLLALLRSVAAVWSSARVTEEAQEI 326 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 L ++ + + +G SL A NY + + L S ++ A F + I Sbjct: 327 LALGRTLVKRIGTVANHVDKLGGSLRSAVSNYNKTIASLDS---RLIQTANRFESIETSI 383 Query: 432 K 432 + Sbjct: 384 E 384 >UniRef50_C0VZN7 RmuC family protein n=1 Tax=Actinomyces coleocanis DSM 15436 RepID=C0VZN7_9ACTO Length = 368 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 13/349 (3%) Query: 104 MINSEQRLSEQFENLANRIFEHSNR---RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF 160 + S Q L E + E + + Q L+S L P+ E L +V Sbjct: 29 LSYSRQHLPEAQPTKSGLGAEEAMQLQSAFSGQVTNQLSSQLRPIYESLHSLSNKVHQVD 88 Query: 161 GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLR 220 ++ + L ++ + QQ++ Q+ Q + L AL+ +K +G WGE L RVLE SGL Sbjct: 89 AQQRENLAGLRSQLVSAQQVDQQILQATLGLDSALRNTSK-RGTWGEASLRRVLEMSGLT 147 Query: 221 EGYEYETQVSIEND-ARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESA 279 + ++ QVS++ + S PDV+V LP ++IDAK+ L AY + N ED Sbjct: 148 KHIDFAEQVSLDTEVDESGAIPDVVVYLPNNAALIIDAKVPLDAYLQVKNLEDTAQ---- 203 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 L+ H +V+ H+ +L ++ Y Q +++D V++F+P E +L+ P L +AL+ Sbjct: 204 LKSHALAVQRHVTVLAKRQYAQ-KLTKSVDSVILFMPSEALVSASLEADPTLFEKALQQG 262 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 +++V P L+ LR++ +LW + + +AQQI + L ++ ++ +G+SL Sbjct: 263 VIVVGPAGLMALLRSVGHLWARQSLAEDAQQILKLGTTLTTRLNKLSSLLADLGKSLSNT 322 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 +Y Q + G L ++ E+N + ++ Sbjct: 323 VKSYNQVIASFE---GRFKTTVRNISALETSVEPELNELETQVRSPLED 368 >UniRef50_B6J7N4 RmuC family protein n=7 Tax=Coxiellaceae RepID=B6J7N4_COXB1 Length = 445 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 83/441 (18%), Positives = 179/441 (40%), Gaps = 32/441 (7%) Query: 1 MDFSIMVYAVI-ALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 MD+ ++ I LV +++G L Q + +Q + +L + ++ Q + R Sbjct: 20 MDWQAILIPGIPTLVTISVGALIYGRLKQQHRVDQT-----LHQQLLIIQDRLKQWDDQR 74 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + L + + Q + ++++ + D I+ M + +++S A Sbjct: 75 NFIQSLIQQQQKEQIEQRQRFDEY-----QIKSLKLIQDSLIQNMQSIREQVSATLTAHA 129 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + ++ + ++ L + + +L + ++F + I Q+ Sbjct: 130 -ENLGNRVDKLTSETQERLKEISGQVDRKLTEGFEKTTETFTDVVKRLTI----IDEAQK 184 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +++ ++L L D +++G +GEV L+ ++ + Y Q ++ N+ Sbjct: 185 KITELSTNVVSLQEVLC-DKRSRGAFGEVQLSNLIHN--MLPESHYALQHTLTNNK---- 237 Query: 240 QPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRK 297 + D I+ LP+ ++VIDAK L +Y++ N + + R A ++ + +R HIR + K Sbjct: 238 RCDCILFLPEPTGNIVIDAKFPLESYQQIHNEKLSESERAQAEKQFRSDIRKHIRDIAEK 297 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 + T + +MFIP E F P+LI A K+ + LVSPTT++ L T Sbjct: 298 ---YIVPGETAEGAVMFIPAEAVFSEIHAHYPDLIEIAHKSRVWLVSPTTMMAILTTARA 354 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 + + + I L F D M + +D AQ++ + K + Sbjct: 355 VLKDAATRKQVHIIQKHLIMLSKDFDRFQDRMDKLAHHIDLAQEDVSKVHKS----SQKI 410 Query: 418 LAQAEAFRGLGVEIKREINPD 438 ++ + ++ + Sbjct: 411 TSRFNKIEKVELDFQDNQPTP 431 >UniRef50_C7M2A7 Putative uncharacterized protein n=1 Tax=Acidimicrobium ferrooxidans DSM 10331 RepID=C7M2A7_ACIFD Length = 479 Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 103/421 (24%), Positives = 195/421 (46%), Gaps = 8/421 (1%) Query: 19 GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS 78 + A + AQ + ++LAE+ + L A++ + ++ L + +++Q Sbjct: 43 QLVEARTKLAQLEPQRLAEQTNLGPLLDQAQRSVEETVKRVVAEHLDHGSEQAIQKATAL 102 Query: 79 LEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL 138 L+ + + +E ++ + ++ ++L ++ A + R + L Sbjct: 103 LDKEFQPRLASLEDGRKLLLES----ADTLRKLVDEQLRSAREQITTTLRASGSEAATQL 158 Query: 139 NSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 ++ L+ +QL + + + + T+ +R+ N ++ LT+AL+ Sbjct: 159 STTLTERMDQLKQLAASISEQLANDQRLTGTVEESLRSFVAENQELRTRVHELTQALQRS 218 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAK 258 K +GNWGE+VL +L +GL + +++ QV+ +D + D I+ LP + +VIDAK Sbjct: 219 PKQRGNWGELVLENLLVGAGLTQHRDFDLQVAFRDDDGRTVIADAIINLPGERHLVIDAK 278 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 + LV Y R D ++A + H ++R I L Y +L LD +F+P+E Sbjct: 279 VQLVDYLRAVE---DPANDTAARAHAEALRRQINELADHRYDRLVDG-ALDGTFLFVPIE 334 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 A LAL+ P L+ A+ I L +PTTL+ L+ + LWR + A++ A +L Sbjct: 335 SALALALETDPALMELAIGKGIFLATPTTLIPVLKLVGFLWRGAERDSRAEEAERLARRL 394 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 DK+ F + I + L A++ Y +A +L SGRGN +A A + + + Sbjct: 395 ADKIASFAESFLQIDKGLQVARNAYERAEGQLRSGRGNAMALARRLGEVSGRSGKALPAP 454 Query: 439 L 439 L Sbjct: 455 L 455 >UniRef50_Q0B0Y1 Putative uncharacterized protein n=4 Tax=Bacteria RepID=Q0B0Y1_SYNWW Length = 450 Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats. Identities = 82/474 (17%), Positives = 175/474 (36%), Gaps = 45/474 (9%) Query: 1 MDFSIMVYAVIALVGVA---------IGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQ 51 M+ + ++ +I L + I L L + +E + +L + Sbjct: 2 MEQAAIIAVIIGLALLVFLLFQLQQRINTLRDQMDKLAAGNLHLEKSQERMEQLLREEMS 61 Query: 52 ITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRL 111 + E + S ++++ SL A + E+ + ++ + S ++ Sbjct: 62 CNREEMNVTARQGREELSNSFKTLSDSLSARMVEMGNLQQYQLDGFSQQMAHLTQSNEQK 121 Query: 112 SEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTL 170 EQ E R + ++N Q L + + + E+L +++ +SF ++ + Sbjct: 122 LEQMRG----TIEERVRELQKENAQKLEQMRTVVDEKLHATLEQRLGESFKLVSERLEQV 177 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS 230 + +Q +A +L + L + K++G WGEV L +LE E +Y + V+ Sbjct: 178 HKGLGEMQ----ALASGVGDLKKVL-SNVKSRGTWGEVQLGNILEDILAPE--QYGSNVA 230 Query: 231 IENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYT---RESALQ 281 ++ A + + V+LP + IDAK L Y R A D E A + Sbjct: 231 VKKGA---ERVEFAVKLPGPDKEGSPLWLPIDAKFPLEDYHRLLEAYDGADLAAIEQAGK 287 Query: 282 EHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL-KNNI 340 ++ + + K + T D+ +MF+P E + L R P L I Sbjct: 288 NLENRIKAQAKEICSK---YIEPPATTDFAIMFLPTEGLYAEVLRR-PGLFENLRQDYRI 343 Query: 341 MLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQ 400 + PTTL L +++ +R + + ++ + + F + + L +A Sbjct: 344 TVAGPTTLAALLNSLSMGFRTLAIQKRSGEVWAILGAIKSEFGKFGMVLEKTRKKLQEAS 403 Query: 401 DNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRS 454 ++ +A + + +++ N L+ + ++ S Sbjct: 404 NSIEEA-------ARRSRVMERKLKEVEELPEKQANELLSAEGYGEEIAAGSDS 450 >UniRef50_B5Y6M2 RmuC domain protein n=1 Tax=Coprothermobacter proteolyticus DSM 5265 RepID=B5Y6M2_COPPD Length = 434 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 77/452 (17%), Positives = 177/452 (39%), Gaps = 34/452 (7%) Query: 9 AVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQ---QITQSEHWRAECELL 65 +IAL+ +AI + + + L E+ +L + + + ++ E L Sbjct: 1 MIIALLQIAIYVAVTKRREDPELIKFLTGLEDNQKQLESLIKDGMKSSKEEMTNLVANLA 60 Query: 66 NNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH 125 N ++ +N+++ ++ E+ + ++ D + + + +E+ N E Sbjct: 61 NMITTNISEMNSTITKNISEMGISQQNLIKNFSDTVSSLADK----TEERLNRMRDTIEA 116 Query: 126 SNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 + + ++N L + + E+L ++ +SF ++ + + +Q + Sbjct: 117 KLKEIQDENSSKLEQMRQTVDEKLQSTLNARISESFKLVSERLEQVHSGLGEVQS----L 172 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 + +L + L + KT+G GE L ++E + +YE V + SR + Sbjct: 173 VNDVGDLKKVL-SNIKTRGILGEDQLEAIIEDILVP--GQYEKNVIVRP--GSREVVEFA 227 Query: 245 VRLP--QGKD-----VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLL 294 V++P G + + IDAK + +ER +AE D E +E ++ + + Sbjct: 228 VKIPVENGGNGSYMWLPIDAKFPMEDFERLIDAEERCDTAECERLRKELENRLKQCAKDI 287 Query: 295 GRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRT 354 K + T D+ +MF+P E F AL + + + +++ PTTL L + Sbjct: 288 RDK---YIDPPNTTDFAIMFLPAESLFAEALRKPGFIEVLQRECRVLITGPTTLSAVLNS 344 Query: 355 IANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGR 414 + ++ + A+++ + ++ F D + + + L +AQ+ A +K Sbjct: 345 LRQGFKIFAIEKKAEEVWKLLGAVKTEVGKFGDLLEKVNKKLQEAQNVIEDASRK----T 400 Query: 415 GNVLAQAEAFRGLGVEIKREINPDLAEQAVSQ 446 + + + E E+ Sbjct: 401 RTIDRKLRNVEEISPEETAELLALSPSSPDDD 432 >UniRef50_A5PDE0 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PDE0_9SPHN Length = 437 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 75/422 (17%), Positives = 159/422 (37%), Gaps = 32/422 (7%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 E++++ + ++Q+ + E L L+ T + + + + + D Sbjct: 35 ELLSQFATLEKQVGELPGTLREEARLGR--DELRGQLTDMRKEAADGRREQQFGLEKVTD 92 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQD 158 KI Q+I E + + ++ +N Q L + + E+L +++ + Sbjct: 93 KIGQLIEKNDERQEALRQAVSDSLD----KLRTENSQKLEKMRETVDEKLQGTLEKRLGE 148 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 SF + + + +Q +A +L R L G+ K++G WGEV L +LE Sbjct: 149 SFKLVSDRLEQVHQGLGEMQ----NLATGVGDLKRVL-GNVKSRGGWGEVQLGMLLED-- 201 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGK------DVVIDAKMTLVAYERYFNAED 272 + ++ET V I + + +RLP + IDAK Y+R A++ Sbjct: 202 MLTRDQFETNVKIRPSSGE--MVEFAIRLPGRSGEDEPLWLPIDAKFPHEDYDRLLVAQE 259 Query: 273 D---YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 + A ++R + + K + + D+ +M++P E F + R Sbjct: 260 AGIGEDVDKAAAALERAIRLQAKTISEK---YVHPPHSTDFAIMYLPTEGLFAEVIRRPG 316 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 + K+ +M+ PTTL L ++ +R + + ++ + + Sbjct: 317 LAMELQSKHRVMVQGPTTLAALLTSLQMGFRTLAIEKRSSEVWQVLGAAKAEFEKYGQVW 376 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 +G+ LD A+ +A ++ V + L E+ ++E +E Sbjct: 377 EKLGKQLDTAKRTVDEAGRR----TRVVTRKLRDVESLEGPQTSELLELVSEGEDGPGDE 432 Query: 450 YR 451 Sbjct: 433 MD 434 >UniRef50_B0MP59 Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP59_9FIRM Length = 435 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 75/459 (16%), Positives = 169/459 (36%), Gaps = 46/459 (10%) Query: 1 MDFSIMVYAVIALVGVAIGW--LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 M+ I++ V +V V I L + A+ E+ +L ++ Q Sbjct: 1 MEILIIITLVACVVSVIISVITLLTQKRLAENIGVNKITDEQTAKQLEMLAERTAQL--- 57 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRM-----EAAQQHADDKIRQMINSEQRLSE 113 + + S + L +L + T + + + ++D R + EQRL Sbjct: 58 ---SAKFDTAQANRVSGESVLRTELVNLVTNLGNTLTDTQKLNSDGTARLLSQFEQRLQS 114 Query: 114 QFENLANRIFEHSNR------RVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQE 166 + A + N ++ + L + + E+L ++ SF +++ Sbjct: 115 IEQRNAADMQNMRNEMAVQLGNINANTKNQLEEMRGMVGEKLQTTLDDKISRSFATVSEQ 174 Query: 167 RHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYE 226 + + + +Q +A +L + L + K +G GE+ L +L E +Y+ Sbjct: 175 LNKVYSGLGEMQS----LAAGVGDLKKVL-SNVKNRGILGEMQLGAILADILAPE--QYD 227 Query: 227 TQVSIENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAEDDYTR---ESA 279 T+V++ D+R+ + V+LP D + ID+K Y NA D + E A Sbjct: 228 TEVAVAPDSRNH--VEFAVKLPGKNDDTVYLPIDSKFPGDTYTALCNAYDSGDKVMIEEA 285 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNN 339 + + +++ + + K + T ++ +MF+P E + + + Sbjct: 286 SKALVVAIKKCAKDIHDK---YICPPYTTNFAVMFLPFEGLYAEVVKL-GLVEELQRNYG 341 Query: 340 IMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKA 399 + + PTT+ L ++ +R + ++ S + + F D ++ + L + Sbjct: 342 VSIAGPTTMSALLNSLYMGFRTLAVQKRGSEVWKILSSVKKEFETFEDVLTKTKKHLQQV 401 Query: 400 QDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 + + A + +G + +I + Sbjct: 402 DSDLETLVG------VRTRAINKQLMSVGEDSTAQIGTE 434 >UniRef50_B2GJV5 Putative uncharacterized protein n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GJV5_KOCRD Length = 411 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 95/383 (24%), Positives = 165/383 (43%), Gaps = 19/383 (4%) Query: 85 EVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSP 144 + +T +E + A + + E L R+ R V +Q + L+P Sbjct: 42 QKSTALETELEDARGQRLAALQDAASARAAAEQLEQRVESLEARAVQDQ---DVMRALAP 98 Query: 145 LREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 L +QL R V AQ+ + + + + Q+ +L +L+ +G Sbjct: 99 LNDQLSSVGRHVNQLERDRAQQFGAVAQALEAARTTDQQLLHATTSLEGSLRSTT-ARGA 157 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAY 264 WGE+ L RV+EA+G+ ++ Q ++ +PD+++ LP + VV+DAK + +Y Sbjct: 158 WGEMQLRRVVEAAGMTRHVDFTEQ-TVRATESGTQRPDMVINLPGAQTVVVDAKAPMSSY 216 Query: 265 ERYFNA------EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 E++ R L H ++R H+ LG K Y + + V+ F+PVE Sbjct: 217 LDAQAVPADGSPENEQRRAQLLAAHAKALRAHVNTLGTKKYWSAEE-NSPELVMCFVPVE 275 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 A ALD L+ A + N+ LVSP +LL +L+ +A WR + NA+++ + +L Sbjct: 276 SALAAALDADASLLDHAARANVALVSPVSLLASLKAVAFSWRQATLTDNARELYRLSREL 335 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 YD+M +S +G SL ++ + Y + + L S VL A L + Sbjct: 336 YDRMGSVGKHLSDMGGSLRRSVEGYNKLVGSLES---RVLPSARRIAELDPTATDSEALE 392 Query: 439 LAEQAVSQDEEYRLRSVPEQPND 461 D R + E +D Sbjct: 393 TRPV----DSVPRPVTATEFVSD 411 >UniRef50_Q2VZP7 DNA recombination protein rmuC homolog n=2 Tax=Magnetospirillum RepID=Q2VZP7_MAGSA Length = 456 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 83/460 (18%), Positives = 170/460 (36%), Gaps = 31/460 (6%) Query: 1 MDFSIMVYAV--IALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHW 58 MDF+++ A+ +AL+GVA+ L +++ + + ++ ++ Sbjct: 15 MDFALISAALSLLALIGVAVLLLRKKDDLSERLDRLERVLRDEARQDRRETAEMIRTFQG 74 Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 + N + T L + T+ A ++ I+Q+ + + Sbjct: 75 DSAASADKNHTELRILVETKLAEFRSDQATQARALREEVLGGIKQLGEGIGKTVAE---- 130 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNL 177 R+ ++ +N Q L + + E+L +++ +SF + + + + Sbjct: 131 QTRVVSEHLEKLRGENTQKLEQMRQTVDEKLQGTLEKRLGESFKLVSDRLEQVHKGLGEM 190 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 Q +A +L R L + KT+G WGEV L +LE +Y + + + S Sbjct: 191 QS----LASGVGDLKRVLT-NVKTRGTWGEVQLGALLEQIF--RADQYMREANCK--KGS 241 Query: 238 RMQPDVIVRLPQGKD------VVIDAKMTLVAYER---YFNAEDDYTRESALQEHIASVR 288 + D +RLP D + ID+K YER D E+A + V+ Sbjct: 242 LERVDFAIRLPGKGDDEPEVLLPIDSKFPNEDYERLQLAVERADPDAVEAAAKGLETRVK 301 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTT 347 + R + K + T D+ ++F+P E + L R P L+ ++ PTT Sbjct: 302 SFARDIRDK---YVNPPTTTDFAILFLPTEGLYAEVLRR-PGLVDLIQRDYKVIAAGPTT 357 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L L I ++ + + ++ + + + + D + + + L +A Sbjct: 358 LGAILNAIQMGFKTMAIEKRSSEVWEILGAVKTEFGKYGDVLDKVQKKLQEASKTIDDVA 417 Query: 408 KKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + L + EA GVE + + + Sbjct: 418 VR-KRAIDRQLRKVEAIPDAGVEALLALGATTIDDTGEDE 456 >UniRef50_C0A6J3 Putative uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6J3_9BACT Length = 490 Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats. Identities = 77/449 (17%), Positives = 170/449 (37%), Gaps = 33/449 (7%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 +G L +++ + A + A Q + + E + + + Sbjct: 62 LGALRTELATQLALTREEQARSAVVTRDDTRVLFADFQKNTTAALTSIREAQSQQFADAR 121 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQ 133 AD RE + +K++ ++ + + + ++ Q Sbjct: 122 HAQNQQLADTREAQNTRLNDFSNRLEKLQTLLATAAEDTRA-------TLDSRLEKLAAQ 174 Query: 134 NRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLT 192 N Q L+ + + E+L +++ +SF + ++ ++ + +Q +A + +L Sbjct: 175 NAQKLDEMRQTVDEKLQSTLEKRLGESFKQVSERLESVHKSLGEMQ----AVATDVGDLK 230 Query: 193 RALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD 252 R L + KT+G WGE L +LE L E YE +++ + RS + V+LP + Sbjct: 231 RVLT-NVKTRGTWGEYQLGAILETMLLPEQYE----TNVKPNPRSESVVEFAVKLPGRDE 285 Query: 253 ------VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 + IDAK YER A D E A ++ A V R + + + Sbjct: 286 AGKPVWLPIDAKFPKENYERLSAASLRADPVATEQAARDLAADVEKSARDIRDR---YIS 342 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 T D+ ++F+P E + + R + ++L P+TL L ++ ++ Sbjct: 343 PPHTTDFAVLFLPTEGLYAEIIRRPGVADKIQREYRVLLAGPSTLAALLNSLQMGFKTLA 402 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 + + ++ + + F + ++ + + LD+A + + G++ + Sbjct: 403 IQKRSSEVWKLLGAVKTQFGTFGELLAKVQKKLDEASK----VVGDAAQRHGSITRRIAK 458 Query: 424 FRGLGVEIKREINPDLAEQAVSQDEEYRL 452 + E+ P A+Q ++ + L Sbjct: 459 VEEMPAAEAAELLPLEADQTAAKGGDSDL 487 >UniRef50_C6XEK3 Putative uncharacterized protein n=2 Tax=Betaproteobacteria RepID=C6XEK3_METSD Length = 451 Score = 217 bits (552), Expect = 8e-55, Method: Composition-based stats. Identities = 87/464 (18%), Positives = 170/464 (36%), Gaps = 32/464 (6%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAA------------ 48 M +++ VIA + + L + +E LA+ + + A Sbjct: 1 MMQIVILVLVIACLLALVVLLLRQSRTPDAASELLAQLMPQLEDKHRAMLRDLHDGLNKL 60 Query: 49 --KQQITQSEHWRAECELLNNEVRSLQSINTSLEA-DLREVTTRMEAAQQHADDKIRQMI 105 + ++ + + + E++ + +L+A + E + + + Sbjct: 61 GDRLSLSSVDSSERLRQAVAQELKETRDAMQALQAAQTNSLAQTRETVLEKLHTTLAEQG 120 Query: 106 NSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQ 165 +EQ L + A S + + L + + E+LD ++ D+F + + Sbjct: 121 KAEQTLIQDTMLKATSQLTASIETLTKAVDARLEEIGGKVSERLDEGFKKTNDTFVRVME 180 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 T I Q+ + ++L + L GD +++G +GEV L ++ G + Sbjct: 181 RLAT----IDEAQKKIDGLTTNVVSL-QELLGDKRSRGAFGEVQLEALVRNVLPNSG--F 233 Query: 226 ETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEH 283 Q + N + D + LP+ V +D+K L Y R + + R A ++ Sbjct: 234 AMQHVLPNGT----RVDCALFLPEPTGTVAVDSKFPLENYHRMLESGISEVERALAQRQF 289 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 A V+ H+ + K + T D +MFIP E F P+++ A+ + +V Sbjct: 290 KADVKKHVDDIASK---YIIPNVTSDGAVMFIPAEAVFAEIHAYHPDVVDYAMAKRVWVV 346 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTTL+ L T + + + I D KL + F M + + +A ++ Sbjct: 347 SPTTLMAVLNTARAVLKDVETRKQVHIIKDELGKLGKEFGRFDVRMKKLADHIRQAHEDA 406 Query: 404 RQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 AQ E G PDL + ++ D Sbjct: 407 LDVHTTSQKISRRF-AQIERVELQGDAEAALALPDLPDDILADD 449 >UniRef50_Q87AZ9 DNA recombination protein rmuC homolog n=56 Tax=cellular organisms RepID=RMUC_XYLFT Length = 456 Score = 214 bits (546), Expect = 4e-54, Method: Composition-based stats. Identities = 86/467 (18%), Positives = 173/467 (37%), Gaps = 34/467 (7%) Query: 2 DFSIMVYAVIALVGVAIGWLFASYQHAQQ----KAEQLAEREEMVAELSAA--KQQITQS 55 DF I+ + ++ + I L H + E R E+ +L +Q++ + Sbjct: 4 DFLILGCLLCIVLVLQILALLRRSDHTALDHVLREEHRVGRAELREQLETLERQQEVRLA 63 Query: 56 EHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQF 115 R+ +L+ + L + SL D R+ QQ D + Q + + + Q Sbjct: 64 SFARSLTDLVARIDQRLDQLTASLGEDARKGRQEASEGQQRFADALGQRLTELTQRNAQS 123 Query: 116 ENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEI 174 N E + N Q L + + + E+L ++ SF ++ + + Sbjct: 124 INEMRTTLEQQLHVLRADNAQQLEQIRTIVDEKLQTTLNTRLDSSFKLVSERLEQVQRGL 183 Query: 175 RNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEND 234 +Q Q+A +L R L K++G WGEV L +L+ + +E +Y V + D Sbjct: 184 GEMQ----QLATGVGDLKRVLTH-VKSRGTWGEVQLDNILDQTLTQE--QYARGVRVCPD 236 Query: 235 ARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYTRESALQ---EHIA 285 A D VRLP + ID K YER +A++ +E + Sbjct: 237 ASE--IVDFAVRLPGRGQYEAPVWLPIDVKCPKEDYERLLDAQEQADQELVRTMGVQLER 294 Query: 286 SVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVS 344 +++ + + K + T D+ +MF+P E + + R P L + +++ Sbjct: 295 AIKIQAKSIRDK---YIVPPHTTDFAVMFLPTEGLYAETIRR-PGLADVLQREYRVVVAG 350 Query: 345 PTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYR 404 PTT+ L ++ +R + + ++ + + F + + ++ + Sbjct: 351 PTTVTALLNSLQMGFRTLAIEQRSSEVWSLLGAVKSEFGKFAGILEKAEKQINTVGKSLG 410 Query: 405 QAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 +A +K + + L E + + L D + Sbjct: 411 EAGRK----TRTIERRLRGVESLSQEQTQVLLDGLDVDTAESDVDSD 453 >UniRef50_A6L970 Putative uncharacterized protein n=9 Tax=Bacteroidetes RepID=A6L970_PARD8 Length = 423 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 79/427 (18%), Positives = 155/427 (36%), Gaps = 39/427 (9%) Query: 49 KQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE-VTTRMEAAQQHADDKIRQMINS 107 Q + + + E L + +Q +E + RE E ++ A D ++ S Sbjct: 15 TQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREESRLVAKDNREELARS 74 Query: 108 EQRLSEQFE----------NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQV 156 E FE + +R+ + + L + + E+L ++ Sbjct: 75 MNEFKEAFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRI 134 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 SF ++ ++ + +Q +AQ+ L R L + KT+GN GE+ L+ +LE Sbjct: 135 GQSFRLVTEQLESVQKGLGEMQT----LAQDVGGLKRVL-SNVKTRGNIGEIQLSMLLEQ 189 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNA 270 L +YE V S + V+LP D + IDAK YE+ +A Sbjct: 190 --LLAPEQYEANVHTR--KGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYEQLLDA 245 Query: 271 EDDYT---RESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 D E+A + +++ + + K L T D+ +MF+P E + + R Sbjct: 246 YDAADSQAIETAGKLLETTIKKMAKDISDK---YLAPPATTDFGIMFLPFEGIYAEVVRR 302 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 L +++ PTTL L ++ +R +++ ++ + + Sbjct: 303 SALLEDLQRNYKVVVTGPTTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKVGG 362 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + ++L A + + A + + RE L E + + Sbjct: 363 MLEKAQKNLQTASGQIEEVLGT------RTRAIQRKLKDVDTLSDREARAILPEIGILTE 416 Query: 448 EEYRLRS 454 E+ + S Sbjct: 417 EDEKAES 423 >UniRef50_C8W9S7 Putative uncharacterized protein n=1 Tax=Atopobium parvulum DSM 20469 RepID=C8W9S7_ATOPD Length = 449 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 67/456 (14%), Positives = 168/456 (36%), Gaps = 27/456 (5%) Query: 3 FSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELS---AAKQQITQSEHWR 59 F +++ ++ L Q+ +E L +++ +S A Q+ ++ + Sbjct: 9 FILLIVGLVTLSSKLSQVKTLQEQNQTSSSELLRNSQDLDRRISDNMTAMHQLMDTKLDQ 68 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + +LQ+ + + ++ R +A Q+ D+ ++ + S + Sbjct: 69 VREVVDQKLTTTLQAQTKQTDQRIAQLDARFDAFQRRVDENMKTTSQT----STEQLGKV 124 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + ++N L + + E+L ++ SF + + + + + + Sbjct: 125 RETVDKQLSDMRKENEAKLELMRQTVDEKLQKTLDERMTQSFQRVSTQLEQVHQGLGEM- 183 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSR 238 +A+ +L + L G KT+G GE+ L +L E YE ++ + S Sbjct: 184 ---RGLAEGVGDLKKVLSG-VKTRGIVGEIQLGAILRDILSPEQYE----ENVATVSGSS 235 Query: 239 MQPDVIVRLPQGK----DVVIDAKMTLVAYERYFNA---EDDYTRESALQEHIASVRNHI 291 + + V+LP + ID+K YE +A ++ +A + A ++ Sbjct: 236 ERVEFAVKLPGESGESVWLPIDSKFPGDTYEHLVDAINTGNEEAIIAAKKSLEARIKAEA 295 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + + K + T ++ ++F+P E + + + L + + + P+T+ Sbjct: 296 KDISTK---YIAPPETTNFAILFLPFEGLYAEVVSQVGLLEQLQREYRVNVCGPSTMAAL 352 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L ++ ++ ++A +I S + + + + + KA+ + + Sbjct: 353 LNSLQMGFQSVAIQKHADEIQRVLSAVKTEFETYKGQLEKARSQVQKAEKALDTILTTRT 412 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + L A LG K D+ + + Sbjct: 413 NVMSRKLRTVTALENLGEAQKTLGISDMVDDGDEDE 448 >UniRef50_B0A7Y0 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y0_9CLOT Length = 439 Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats. Identities = 71/404 (17%), Positives = 153/404 (37%), Gaps = 28/404 (6%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ--SINTSLEADLREVTTRMEAAQQ 95 + +M +L + ++ + + E N + + S L A + + Q+ Sbjct: 32 QRDMEQKLISVEKALREEFTVNREESRKNEQSNRTEIGSSIEKLSATILSNMIELSNLQK 91 Query: 96 -HADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR---QSLNSLLSPLREQLD- 150 D R M + + + + + + N + E + ++L + + E+L Sbjct: 92 NQFDTYSRTMERTLDAFNYNLRSSIDDLTKLQNEKFVELTKSTEENLEKMRVTVDEKLQS 151 Query: 151 GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVL 210 R++ +SF ++ + + +Q +A +L + L + KT+G GEV L Sbjct: 152 TLERRLSESFKVVSERLEQVHKGLGEMQS----LAAGVGDLKKVL-SNTKTRGVLGEVQL 206 Query: 211 TRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAY 264 R+LE E +YE V + SR + ++LP + +DAK L Y Sbjct: 207 ERILEQFLSPE--QYEKNVITK--KGSRETVEFAIKLPGKDYDNKTVYLPLDAKFPLEVY 262 Query: 265 ERYFNAEDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAF 321 + +A D + A + ++ + + K + T D+ LMF+P E + Sbjct: 263 NKLLDAYDLQNQAQIDAASKNLERFIKKSAKDIRDK---YIDPPNTTDFGLMFLPTEGIY 319 Query: 322 LLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDK 381 L Q + + NI + PTTL+ L ++ +R +++ ++ + + Sbjct: 320 AEVLKNQSLVEFVQREYNINITGPTTLVALLNSLQMGFRSLAIEKHSSEVWKILGAVKTE 379 Query: 382 MRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 F +++ L++A + + + L + Sbjct: 380 FSKFETVLNSAQNKLNQASSEIDKLVGTRTRQINRKLKNVDKLS 423 >UniRef50_B3SEY0 Putative uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens RepID=B3SEY0_TRIAD Length = 863 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 65/327 (19%), Positives = 133/327 (40%), Gaps = 24/327 (7%) Query: 109 QRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQER 167 L+E R E + + N++ L+ + S + E+L +++ +SF + + Sbjct: 110 AELNENKIENMRRSMEEKVNNMQQNNQKKLDEIRSAVEEKLQSTLEKRLGESFKLVSNQL 169 Query: 168 HTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYET 227 + + +Q +A +L + L + KT+G WGEV L +L E ++ Sbjct: 170 EMVYKGLGEMQ----NLATGVGDLKKVLT-NVKTKGTWGEVQLGNILRQILSEE--QFVE 222 Query: 228 QVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAEDDYTR---ES 278 I D + + + ++LP D + IDAK+ L+ Y + ++ + E Sbjct: 223 NSKI--DPLNNNRVEYALKLPNKDDENSNTLLPIDAKLPLIEYHKLIEFYENADKDNIEK 280 Query: 279 ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELIT-EALK 337 L+ +V+ + + K + + D+ ++F+PVE + + R P LI Sbjct: 281 QLKILENAVKKEAKSINEK---YIKPPHSTDFAVLFLPVEGLYAEII-RIPGLIDKLQRD 336 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 +++ SPTTL+ L +I ++ + + ++ + + F+ +S LD Sbjct: 337 YRVVITSPTTLIALLNSIQMGFKTLAIEKRSNEVWKLLDTVKHEFSNFVGILSKTKVKLD 396 Query: 398 KAQDNYRQAMKKLSSGRGNVLAQAEAF 424 +A A K +G G Sbjct: 397 QASKAIGDAEYKAGAGTGKTKVLTSRV 423 >UniRef50_Q16CD2 RmuC domain protein n=24 Tax=Rhodobacterales RepID=Q16CD2_ROSDO Length = 411 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 75/394 (19%), Positives = 155/394 (39%), Gaps = 29/394 (7%) Query: 46 SAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDK-IRQM 104 AA + +E + +L V+ L + L L+ V+ AQ ++ Sbjct: 38 RAAARSAKSTEPLMQQLGVLGQHVQHLSAGQEQLRGGLQTVSDTQANAQTQVIQTVEARL 97 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 +Q++ ++ + A R ++++L + ++E L G +Q S + Sbjct: 98 AAVQQQMQDRLADNAMR------------SQRALTDMQERMKETLHGSSKQTTTSLTQLQ 145 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + + I Q +++ + ++L L + +T+G +GE+ L ++ + Sbjct: 146 ERLAS----IDKAQDNITKLSGDVLSLQDIL-SNKQTRGAFGEIQLHDIVSKA--LPNDS 198 Query: 225 YETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 Y Q ++ N + D ++ LP +VID+K L AYE+ A+ ++ + A+ + Sbjct: 199 YALQHTLSNGK----RADCLIHLPNPPGPIVIDSKFPLEAYEQLRAAKTEWDLKDAVAKM 254 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 +V HI + K + T D LMF+P E + PEL+ + + +V Sbjct: 255 KTAVTKHINDISEK---YIIEGETADGALMFLPSEAVYAELHSNFPELVRKGFDARVWIV 311 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTT + L T+ + + A I L+ + L ++ + + +AQ + Sbjct: 312 SPTTCMATLNTMRAILKDARMREQAGAIRKTLKMLHRDVELVVERVGKLDTHFRQAQRDV 371 Query: 404 RQAMKKLSSGRGNVLAQAE-AFRGLGVEIKREIN 436 + + F L E + + Sbjct: 372 HEISTAAERAGKRAVKLDNFDFEELSQEDDKILP 405 >UniRef50_C5CUJ7 Putative uncharacterized protein n=1 Tax=Variovorax paradoxus S110 RepID=C5CUJ7_VARPS Length = 455 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 85/447 (19%), Positives = 164/447 (36%), Gaps = 36/447 (8%) Query: 20 WLFASYQHAQQKAEQLAEREEMVAELSAAKQQIT----------QSEHWRAECELLNNEV 69 WL A Q A +E LA M ++++ + E +A V Sbjct: 23 WLLARRQPAPDHSELLAVLSAMGTANERTERELRHEIGESSRGARQETAQAFATFQQALV 82 Query: 70 RSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRR 129 + + A L + ++ + Q+ D + + + + + E + Sbjct: 83 QQGAEATRTQNAQLDAFSLQLASLQKTLADTLNTQLQGLSESNARRLSEVRATMEAQLAQ 142 Query: 130 VDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + + N L+ + + E+L ++ +SF + A + + +Q +A Sbjct: 143 LQQSNTAKLDEMRKTVDEKLQSTLEARLGESFKQVADRLEQVHKGLGEMQT----LAVGV 198 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 +L R L + KT+G +GEV L +LE E +Y Q+ + + + D +R P Sbjct: 199 GSLQRVLT-NVKTRGVFGEVQLEALLEQVLTPE--QYAKQIETKPRSG--QRVDFAIRFP 253 Query: 249 QGKD------VVIDAKMTLVAYERYFNAEDDYTR---ESALQEHIASVRNHIRLLGRKDY 299 D + IDAK YER +A + E A + A +R R + Sbjct: 254 GRGDDGAPVWLPIDAKFPRDDYERLIDAHERADAPGAELAAKALEARIRVEARSIAE--- 310 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 L T D+ ++F+PVE + L R + ++ + L PTTLL L ++ + Sbjct: 311 NYLAAPHTTDFAILFLPVESLYAEVLRRPGLMDAIQRQHRVTLAGPTTLLAMLNSLHMGF 370 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 R + A ++ + + + + +S I + + KA D +A + + Sbjct: 371 RTLALEQQASEVWKVLGAVKTEFERYGEWVSRIKEQVAKASDTLDKA----DTRAKQMRL 426 Query: 420 QAEAFRGLGVEIKREINPDLAEQAVSQ 446 L + + P A+ Sbjct: 427 ALRKVEALPEAEAQVLLPPTADSEGDD 453 >UniRef50_A9ZIQ0 RmuC family protein (Fragment) n=2 Tax=Gammaproteobacteria RepID=A9ZIQ0_COXBU Length = 374 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 79/399 (19%), Positives = 165/399 (41%), Gaps = 28/399 (7%) Query: 1 MDFSIMVYAVI-ALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWR 59 MD+ ++ I LV +++G L Q + +Q + +L + ++ Q + R Sbjct: 1 MDWQAILIPGIPTLVTISVGALIYGRLKQQHRVDQT-----LHQQLLIIQDRLKQWDDQR 55 Query: 60 AECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + L + + Q + ++++ + D I+ M + +++S A Sbjct: 56 NFIQSLIQQQQKEQIEQRQRFDEY-----QIKSLKLIQDSLIQNMQSIREQVSATLTAHA 110 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + ++ + ++ L + + +L + ++F + I Q+ Sbjct: 111 -ENLGNRVDKLTSETQERLKEISGQVDRKLTEGFEKTTETFTDVVKRLTI----IDEAQK 165 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +++ ++L L D +++G +GEV L+ ++ + Y Q ++ N+ Sbjct: 166 KITELSTNVVSLQEVLC-DKRSRGAFGEVQLSNLIHN--MLPESHYALQHTLTNNK---- 218 Query: 240 QPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRK 297 + D I+ LP+ ++VIDAK L +Y++ N + + R A ++ + +R HIR + K Sbjct: 219 RCDCILFLPEPTGNIVIDAKFPLESYQQIHNEKLSESERAQAEKQFRSDIRKHIRDIAEK 278 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 + T + +MFIP E F P+LI A K+ + LVSPTT++ L T Sbjct: 279 ---YIVPGETAEGAVMFIPAEAVFSEIHAHYPDLIEIAHKSRVWLVSPTTMMAILTTARA 335 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 + + + I L F D M + + Sbjct: 336 VLKDAATRKQVHIIQKHLIMLSKDFDRFQDRMDKLAHHI 374 >UniRef50_B6BU70 Transmembrane protein n=9 Tax=Bacteria RepID=B6BU70_9PROT Length = 434 Score = 210 bits (535), Expect = 7e-53, Method: Composition-based stats. Identities = 72/454 (15%), Positives = 174/454 (38%), Gaps = 25/454 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M +++ A++ ++ L +L E L + ++ Sbjct: 1 MFEYLILGALVVIIVGVFMVLTKQRPANNDINSELNEHHR--KILQDFNDSLNKTTDRFN 58 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQ-QHADDKIRQMINSEQRLSEQFENLA 119 + ++ E + + + +L+ +E+ +++A + + ++ +Q + Sbjct: 59 KL--VSEEFKYNRDVLENLKVSQQEIINQLKAEVVEKLNQALQNQGKIQQESIQSSLKNT 116 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 S + + L + + E+L+ ++ ++F + T I Q+ Sbjct: 117 TLQLLASIESLTKSVDSRLEEITGKVHERLEEGFKKTNETFLSVMERLAT----IDEAQK 172 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + ++L + L GD +++G +GE+ L +++ + + Q S +N + Sbjct: 173 KIDGLTTNVVSL-QELLGDKRSRGAYGELQLESLVKNILPPDS--FSFQHSFKNGS---- 225 Query: 240 QPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRK 297 + D ++ LP+ V +D+K + Y++ F++ + + A ++ VR HI + K Sbjct: 226 RADCVLFLPEPTGTVAVDSKFPMENYQKMFDSSLSEPEKIKAEKQFKLDVRKHITDISTK 285 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 + T D +MF+P E F PELI ++L + + +VSPTTL+ L T Sbjct: 286 ---YIIPDETSDGAVMFVPAEAVFAEIHAYHPELIQDSLNHKVWVVSPTTLMAVLNTARA 342 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 + + + I KL + F M + ++ A +N + + Sbjct: 343 VLKDVETRKQVHIIKAELGKLGKEFERFDQRMKKLADNIRMAHENAQDVHIT----SQKI 398 Query: 418 LAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYR 451 + + ++ + + + + E+ Sbjct: 399 SRRFSQIEKVELQDDPNELLEFEDSLIEKSEQKE 432 >UniRef50_Q5ZWX9 Transmembrane protein n=5 Tax=Legionella RepID=Q5ZWX9_LEGPH Length = 420 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 86/429 (20%), Positives = 178/429 (41%), Gaps = 37/429 (8%) Query: 7 VYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLN 66 + IAL + + W+ ++ EQL ER + + I S+ ++ + +N Sbjct: 13 IALAIALQFLLLFWVLIKQAQQKKLTEQLGERIQQALISQLHQLHIDLSQSYQTSQQFIN 72 Query: 67 NEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHS 126 ++ ++ Q +D RQM + ++++ F++ A+ Sbjct: 73 EKI----------------AQGQLATQQLISDAIQRQMADVREQMTHSFKHHAS-SLTSH 115 Query: 127 NRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQ 186 + + E+ R LN+L + +L + +F + I Q+ +++ Sbjct: 116 LQLLTEEIRNHLNTLTQQVNHKLTEGFEKTSSTFIDVVKRLTI----IDEAQKKITELSS 171 Query: 187 EAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVR 246 ++L L D K +G +GEV L+ ++ S + Y+ Q ++ N + D ++ Sbjct: 172 HVVSLQDVLV-DKKARGAFGEVQLSTLI--SNMLPSASYQMQYTLSNQK----RADCVLF 224 Query: 247 LPQG-KDVVIDAKMTLVAYERYFNAED-DYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 LP+ ++VIDAK L Y+R N++ R+S Q+ ++ HI+ + K + Sbjct: 225 LPEPTGNIVIDAKFPLETYQRLINSDALSTDRKSLQQQFRQDIQKHIKDIAEK---YIVP 281 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 T D +MFIP E F P+LI + K + LVSP+TL+ L T + + + Sbjct: 282 NETTDGAMMFIPAESIFAEIHANYPDLIAMSQKLKVWLVSPSTLMAVLTTARAVLKDDAT 341 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 + I L + + F M + + +D A + + ++ + ++ + Sbjct: 342 RKQVHIIQKHLQALANDFQRFEKRMDKLSKHIDLAHQDVNEV----NTSAKKITSRFQKI 397 Query: 425 RGLGVEIKR 433 + +E+ Sbjct: 398 ESVDIELDE 406 >UniRef50_Q1VU20 Putative uncharacterized protein n=1 Tax=Psychroflexus torquis ATCC 700755 RepID=Q1VU20_9FLAO Length = 499 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 78/411 (18%), Positives = 164/411 (39%), Gaps = 25/411 (6%) Query: 48 AKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRM-EAAQQHADDKIRQMIN 106 A Q Q E + + L S E + E + + +Q+ D +Q I+ Sbjct: 103 AIQNKRQIEFNQQTVDSTKENRNELSKSLKSFEENFSENIKNLNDLLRQNFGDFNKQQID 162 Query: 107 SEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQ 165 + +E +N+ + E + + + E N LN + + E+L +++ +SF + + Sbjct: 163 LNGQATENIKNVE-KTIEKNLKSIREDNTIQLNEMRKTVDEKLQTTLEKRLGESFKQVSD 221 Query: 166 ERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEY 225 + + +Q +A +L + L + KT+G GE L +LE + +Y Sbjct: 222 RLEQVHKGLGEMQ----NIAIGVGDLKKVL-SNVKTRGVLGEYQLENILEQILTPD--QY 274 Query: 226 ETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAKMTLVAYERYFNAEDDYTRE--- 277 V+ + +++ + ++LP ++ + ID+K + Y+R +A D +E Sbjct: 275 AKNVATKKGSQAN--VEFALKLPGKEEGKEVWMPIDSKFPIEDYDRLLDAFDKGEKEGIE 332 Query: 278 SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE-AL 336 SA + + + + + + K + T D+ +MF+PVE + L P L Sbjct: 333 SAQKVLLKKIESFAKSISEK---YIDPPHTTDFGIMFLPVESLYAEVLRH-PGLFEILQR 388 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 K I + PTTL L ++ +R + + ++ D + + + F +S + + L Sbjct: 389 KYKITVTGPTTLSALLNSLQMGFRTLAVQKRSSEVWDILKAVKFEFKEFSGVLSKVHKQL 448 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + A ++ L E F L + E+ + + + Sbjct: 449 NTASGTLETLRTTRTNVMERKLKDVETFTALESKEILELPDSIKVEESDDE 499 >UniRef50_Q2LRQ6 RmuC family protein n=14 Tax=Bacteria RepID=Q2LRQ6_SYNAS Length = 421 Score = 208 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 71/445 (15%), Positives = 171/445 (38%), Gaps = 46/445 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M + ++ ++ I L ++ A + E +++ ++ + E R Sbjct: 1 MINNALIIVLVLAAIGVILQLVLIFRKVSINAGAVDEALQIIERNYERTERAVREEISRN 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E + + +S + + +L + + ++ + + K+ M + Sbjct: 61 REESAHAQRQSREELAGALRSVGDTLNQQLMDLTRTNEGKLDAMRIT------------- 107 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 E + + N L+ + S + E+L +++ +SF + ++ + + +Q Sbjct: 108 --VEEKLQTLQIDNAAQLDRMRSTVEEKLQGTLEQRLGESFRQVSERLEQVYRGLGEMQT 165 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +A +L + L + KT+G WGEV L +LE + +Y T ++ + Sbjct: 166 ----LAAGVGDLKKVL-SNVKTRGVWGEVQLGAMLEQVLHPD--QYATNLATKEGG---E 215 Query: 240 QPDVIVRLPQGKD-------VVIDAKMTLVAYERYFNAEDDYTRES---ALQEHIASVRN 289 + + V+LP + + IDAK + Y R +A + ES A + +R Sbjct: 216 RVEFAVKLPGRGEEQDEAVWLPIDAKFPMEDYLRLLDAREKVETESMEIAARHLDNRIRQ 275 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 R + K L +T D+ ++F+P E F R T + +++ PTTL Sbjct: 276 CARDICEK---YLNPPQTTDFAILFLPTEGLFAEVARRTGLTETLQREWRVVIAGPTTLW 332 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKK 409 L ++ +R + + ++ + + + + + + ++ + + L +A D +A Sbjct: 333 SILNSLQMGFRTLAIQKRSSEVWNLLAAVKTEWTRYGEILNKVQKKLHEASDALDKA--- 389 Query: 410 LSSGRGNVLAQAEAFRGLGVEIKRE 434 + + + + + + Sbjct: 390 ----QTRTRVIGKKLKDVQELPEGQ 410 >UniRef50_B3T9Y6 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG7N23 RepID=B3T9Y6_9ZZZZ Length = 376 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 70/355 (19%), Positives = 141/355 (39%), Gaps = 13/355 (3%) Query: 91 EAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLD 150 + + + + + ++ F+ +A+ I + + +L L+ Sbjct: 24 DRNSKSLLELQEKNSDRDKDFENAFKAIASDIAISNRDDFLKLANSQFKNLSKESDTNLE 83 Query: 151 GFRRQVQDSFGKEAQERHT-------LTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQG 203 ++ + ++ G+ ++ + L + + + L L K +G Sbjct: 84 NKKKLIDENLGQMSKRLKSIEDASIKLNENLEATNTQTKDLTDTTVKLREILSSSQK-RG 142 Query: 204 NWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVA 263 WGE ++ +L+ GL EG Y Q +++ +PD LP+ K + +D K L Sbjct: 143 QWGERIVEDILDVIGLIEGINYTKQAVVDSGE----RPDFTFILPKEKTINMDVKFPLAH 198 Query: 264 YERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLL 323 YE+Y + ED+ + + + + V+ H++ + +++Y TLDYVLM +P E + Sbjct: 199 YEKYIDTEDEQVQINEKKSFLKDVKKHVKDITKRNYIDPASG-TLDYVLMLVPNESIYSF 257 Query: 324 ALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMR 383 +I AL+N ++L SP TL L I R A + S + Sbjct: 258 INKEDSGIIDFALQNKVLLCSPLTLYAILSLINQATRNFEIEEKASDVMALLSTFKSQWE 317 Query: 384 LFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPD 438 +++ M +G+S+ A+ +Y + L + E L K E + Sbjct: 318 KYVEKMDKMGRSISTAKADYEDLVTTRRRQLEKPLDKIEDITNLVDSNKSENLDE 372 >UniRef50_Q28JZ7 Putative uncharacterized protein n=2 Tax=Rhodobacteraceae RepID=Q28JZ7_JANSC Length = 387 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 72/350 (20%), Positives = 138/350 (39%), Gaps = 17/350 (4%) Query: 95 QHADDKIRQMINSEQRLSEQFENLANRIFE--HSNRRVDEQNRQSLNSLLSPLREQLDGF 152 + + + + Q L + E LA + R ++++ L +++ + Sbjct: 48 EPLAQHMASLGQTVQALGQGQERLAGGLASVSDHQARAQASLQEAMERRLEEVQKGMSET 107 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 R + E +I Q +++ + + L L + + +G +GE+ L Sbjct: 108 LRGTSTRTARSLGELQQKLEQIDRAQAKIEKLSGDVLGLQDIL-SNKQRRGMFGEIQLND 166 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAE 271 ++ SG Y Q ++ N + DV+VRLP +VIDAK L AYE NA+ Sbjct: 167 IV--SGALPPDAYGFQATLSNGK----RADVLVRLPNPPGPIVIDAKFPLEAYEALMNAQ 220 Query: 272 DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPEL 331 + AL+ A+VR HI+ + K + T D LMF+P E + R PE+ Sbjct: 221 GPEDQLRALKALGAAVRVHIKAISEK---YIIEGETADGALMFLPSEAVYAELHARLPEV 277 Query: 332 ITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSA 391 + + + +VSPTT + L T+ + + A +I +L+ + + + Sbjct: 278 VRDGFDARVWIVSPTTCMATLNTMRAVMKDARMREQAGEIRKALRQLHRDVEIVGERAGK 337 Query: 392 IGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAE 441 + L A ++ + + + +AE E ++ Sbjct: 338 LEAHLRMAGED----VAGILTASVRAGKRAERLDNFDFEEIAPEGAEIVP 383 >UniRef50_C8P1U3 DNA recombination protein RmuC family protein n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=C8P1U3_ERYRH Length = 430 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 76/402 (18%), Positives = 151/402 (37%), Gaps = 21/402 (5%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECEL--LNNEVRSLQSINTSLEADLREVTTRMEA 92 + + E + Q Q + +N V + T RM+ Sbjct: 36 QLKTQRNSVENETLQNQFAQLKDLMMSQANNTINQMVAFDFESREKTSDKFNQFTDRMDL 95 Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 + R F + N + ++ E + L + + + LD Sbjct: 96 RFNDLTQRNIVFEKEVNRALILFHDKMNLQLDQQFTKLTESVEKRLLLMDEKVNQSLDQG 155 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 ++ D+F + I Q+ ++ E ++L L D KT+G +GEV L + Sbjct: 156 FKKTNDTFTNIVERLSK----IDEAQKKIDALSVEIVSLQDVLT-DKKTRGTFGEVQLHQ 210 Query: 213 VLEAS-GLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNA 270 +L + G + Y+ Q ++ ++PD ++ P+ +VID+K L Y R + Sbjct: 211 ILASIFGDKNDRIYQMQYNLSPG----VRPDAVLFAPEPLGTLVIDSKFPLENYRRMIDK 266 Query: 271 E-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP 329 + R++A ++ + + HI + K + T D LMF+P E F Sbjct: 267 SLETSQRQNAERQFVLDCKKHIDAIADK---YIIPGTTSDQALMFVPAEAVFATINAYHS 323 Query: 330 ELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDM 389 +++ A + + LVSPTTL+ L TI + + + A I D +L + + Sbjct: 324 DILDYAQRKRVWLVSPTTLMSTLTTIQTILVNLEREKYASVIHDELKRLNVEFDRYRLRW 383 Query: 390 SAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 + + ++ Q +K L + ++ E+ + + Sbjct: 384 DNLSKHIENV----NQDVKDLHITSRKISSRFESISEVDRDA 421 >UniRef50_A8SFR6 Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SFR6_9FIRM Length = 447 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 71/461 (15%), Positives = 164/461 (35%), Gaps = 33/461 (7%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+F +Y ++ + + L + +E + + A+ ++ + + + Sbjct: 3 MEFLAGLYTLLLVAICLLQALLLHRTGKPAAQQDDEALKEWLRQQLEAQARVLEEKQAQQ 62 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 + L ++ T+++ +T QQ + +++ + S R E+ Sbjct: 63 AQQNLAAMAHISDTLQTAVQGMSSTLTAGQNTQQQTMEQRLQGLEASNARKLEEMR---- 118 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + + QN Q L+ + + EQL +++V +SF + + + +Q Sbjct: 119 KALADGLAAMQAQNAQKLDEIRHTVDEQLQDALQKRVTESFKAVNDQLEQVYKGLGEMQS 178 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +A + L + L G KT+G GE+ L +LE E Y+ ++ S Sbjct: 179 ----LAADVGGLKQVLSG-VKTRGILGEIQLGAILEEILAPEQYD----TNVATIPGSTQ 229 Query: 240 QPDVIVRLPQGK----DVVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIR 292 + + +R+P + ID+K Y +A+ D E+A +R+ + Sbjct: 230 RVEYAIRMPGVDGNSVWLPIDSKFPGDTYAHLQDAQASGDAQAVENARHALELVLRSEAK 289 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 + K + T + ++F+P E + ++ L + + P+T+ L Sbjct: 290 DIREK---YVEPPYTTAFGILFLPFEGLYAEVVNA-GLLEVLQRDYQVNVAGPSTMAALL 345 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 ++ ++ + + ++ + + F +S + Q L + + + S Sbjct: 346 NSLQMGFKTLAIQKRSGEVWQLLGAVKTEFDKFGQGLSKMQQRLRQTDEELDNLIGVRSR 405 Query: 413 GRGNVLAQAEAFR--------GLGVEIKREINPDLAEQAVS 445 L + L E R + L E Sbjct: 406 AISRKLRAVQTLDENTAATLLELDTEPGRPVTARLPESGEE 446 >UniRef50_B7QSN6 RmuC domain protein n=11 Tax=Rhodobacteraceae RepID=B7QSN6_9RHOB Length = 419 Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats. Identities = 71/376 (18%), Positives = 148/376 (39%), Gaps = 26/376 (6%) Query: 45 LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQM 104 L + + E + +L + L +L +L+ V+ A+ +++ + Sbjct: 36 LRNSARAARAIEPLGHQIGVLGQMTQQLSMGQEALRGNLQAVSDT------QANAQLQIL 89 Query: 105 INSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEA 164 E RLS+ + + +R+ +++ R+ ++L + ++E L G ++ S + Sbjct: 90 QTMESRLSDVQQRMNDRLADNALRQ-----ARALAEMQERMQESLHGSTKRTVTSLTQLQ 144 Query: 165 QERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE 224 + I Q +++ + + L L + +T+G +GE+ L ++ + Sbjct: 145 ERLAV----IDKAQDNITKLSGDVLGLQDIL-ANKQTRGAFGEIQLNDIVSKA--LPADS 197 Query: 225 YETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEH 283 Y Q ++ N + D ++ LP +VID+K L Y+ NAE R SA ++ Sbjct: 198 YAFQHTLSNGK----RADCLIHLPNPPGPIVIDSKFPLEPYDALRNAETPEQRASAARQL 253 Query: 284 IASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLV 343 ++R HIR + K + T D LMF+P E + +++ E + +V Sbjct: 254 KGALRAHIRAIAEK---YILDGETADGALMFLPSEAVYAELHANFADVVREGFAAKVWIV 310 Query: 344 SPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNY 403 SPTT + L T+ + + A I L+ + D + + + A + Sbjct: 311 SPTTCMATLNTMRAILKDARMREQAGAIRTELGLLHKDVERLGDRVGNLDRHFGMAAKDI 370 Query: 404 RQAMKKLSSGRGNVLA 419 + Sbjct: 371 AEIKISADKAGRRAQR 386 >UniRef50_B3T8J2 Putative RmuC family protein n=1 Tax=uncultured marine microorganism HF4000_APKG5H11 RepID=B3T8J2_9ZZZZ Length = 343 Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats. Identities = 78/341 (22%), Positives = 141/341 (41%), Gaps = 20/341 (5%) Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLN 181 +F + +L + +R+ +D R +QD ++ L + +L + Sbjct: 23 MFRLLKQGGSRSEDSALGHQVGEIRQGMDRVNRAIQDLNLDRVKQSERLETMLTSLNSSS 82 Query: 182 AQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQP 241 + + + + + +G WGE + V G E Y Q ++ + +P Sbjct: 83 SALRD--------ILANTQVRGQWGERMAEDVFRLIGFVEAVNYTKQTTVADGHS---RP 131 Query: 242 DVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQ 301 D + +P+GK + +DAK L Y +Y AE + + + I VR+ R + +DY Sbjct: 132 DFTILMPEGKKLNMDAKFPLTNYMKYVEAESEQEAQEYSRAFIRDVRDRAREVVGRDYIN 191 Query: 302 LPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRY 361 P TLDYVL+FIP EP + +++ EAL+N ++L SP +L L I + Sbjct: 192 -PDDNTLDYVLVFIPNEPMYHYIQQHGADVVEEALRNQVVLCSPISLFAILSIIRHALDN 250 Query: 362 EHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQA 421 + + +I + + F+D M +G+ ++ AQ + + L + Sbjct: 251 FAIEQASDEILSELAVFDRQWGNFVDQMETVGRRMESAQTAFESLKGTRTRALDRPLGRI 310 Query: 422 EAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDE 462 R KR PD E DE + S+PE ++ Sbjct: 311 RDIR------KRRNIPDALEDGA--DEADDVMSLPEPADET 343 >UniRef50_A3RWT8 RmuC family protein n=7 Tax=Burkholderiales RepID=A3RWT8_RALSO Length = 489 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 79/445 (17%), Positives = 169/445 (37%), Gaps = 33/445 (7%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSA-AKQQITQSEHWRAECELL-NNEVRSLQSINTSLE 80 A + + ++ + +L++ A Q Q + + + L + + L+++ SL+ Sbjct: 64 ARIGRSDVSQQLGQFQQVLATQLTSVATVQNNQIDTFAQQLTKLTESNTQQLEAVRQSLQ 123 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 ++ A + + ++Q + +E+ E + ++ N L+ Sbjct: 124 VQAQQGREEQAGALRRFGETMQQQLAQLAEGNERRLAEVRATLEQKLKDIEANNATKLDE 183 Query: 141 LLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 + + E+L +++ +SF + + + +Q +AQ +L + L + Sbjct: 184 MRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQ----ALAQGVGDLKKVLT-NV 238 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------- 252 KT+G WGEV L +LE E Y+ ++E + + + +RLP D Sbjct: 239 KTRGTWGEVQLEMLLEQMLTPEQYD----KNVETVRGTGARVEFAIRLPGKTDADRDATV 294 Query: 253 -VVIDAKMTLVAYERYFNAEDDYTRESA---LQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 + IDAK YER +A++ E A +E +VR + + K + T Sbjct: 295 WLPIDAKFPKEQYERLLDAQERADAEGATVASRELEVAVRKEAQTIHEK---YIAPPDTT 351 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+ ++F+P E + L R K + + PTTL L ++ +R + + Sbjct: 352 DFAILFLPTEGLYAEVLRRPGLTDELQRKFRVTVAGPTTLTAILNSLQMGFRTLALEKRS 411 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLG 428 ++ + + F D ++A ++L++A N QA + + Sbjct: 412 SEVWQVLGAVKSEFGKFGDVLAATKKTLERAVSNIEQA-------EVRTRQMNRKLKAVE 464 Query: 429 VEIKREINPDLAEQAVSQDEEYRLR 453 L + Q ++ Sbjct: 465 ALPSDSAQTLLGLETAGQQDDAETD 489 >UniRef50_C7H3S0 RmuC domain protein n=2 Tax=Firmicutes RepID=C7H3S0_9FIRM Length = 443 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 70/460 (15%), Positives = 172/460 (37%), Gaps = 26/460 (5%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M+F +Y ++ + + + + + E + + + A+ + + Sbjct: 1 MEFLAGLYTLLLVTICLLLAVVLWKLNKPRNGGDYEELKRWMQQQLDAQAK----DFAAR 56 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 + + +++S++ +L+ ++ ++T + Q + Q + S + + Q Sbjct: 57 QAAMAEQNYTAIRSVSETLQTSVQSMSTTLAQGQSGQQQILTQRLQSLEAANTQKLEELR 116 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 R + + +N + L+ + + EQL +++V +SF + + + +Q Sbjct: 117 RTLAENMTALQAENAKKLDEIRHTVDEQLQDALQKRVTESFKAVNDQLEQVYKGLGEMQ- 175 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +A + L + L G KT+G GE+ L +LE E +YET V+ S Sbjct: 176 ---NLAADVGGLKQVLSG-VKTRGILGEIQLGAILEEILAPE--QYETNVATIP--GSTQ 227 Query: 240 QPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIR 292 + + +++P D + ID+K Y +A+ D E+A +R+ + Sbjct: 228 RVEYAIKMPGADDGTVWLPIDSKFPGDTYAHLQDAQASGDAQAVENARHALELVLRSEAK 287 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVAL 352 + K + T + ++F+P E + ++ L + + P+T+ L Sbjct: 288 DIREK---YVEPPYTTTFGILFLPFEGLYAEVVNA-GLLEVLQRDYQVNIAGPSTMAALL 343 Query: 353 RTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSS 412 ++ ++ + + ++ + + F +S + Q L + + + S Sbjct: 344 NSLQMGFKTLAIQKRSGEVWQLLGAVKTEFDKFGQGLSKMQQRLRQTDEELDNLIGVRSR 403 Query: 413 GRGNVLAQAEAFRGLGVEIKREINPDL-AEQAVSQDEEYR 451 L ++ E++ + A EE Sbjct: 404 AISRKLRSVQSLDDASAAALLELDNEPGRPVAARLPEELE 443 >UniRef50_C9KWE1 RmuC domain protein n=17 Tax=Bacteroidales RepID=C9KWE1_9BACE Length = 410 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 70/403 (17%), Positives = 150/403 (37%), Gaps = 28/403 (6%) Query: 57 HWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 + +L + +Q L +RE+ M +++ +++ + + + Sbjct: 26 NQTQAEQLQIALRQQMQENREELNRSIRELRMEMTQTLNQNMQQLQDVLHKNMMTTGELQ 85 Query: 117 NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIR 175 + + + + L+ + + E+L ++ SF + + + Sbjct: 86 RQKFDMMARQQETLIKSTEKRLDDMRLMVEEKLQKTLNERIGQSFEIVRSQLENVQKGLG 145 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 ++ +AQ+ L + L + K +G +GEV L +LE E Y+ +++ Sbjct: 146 EMKS----LAQDVGGLKKVL-SNVKMRGTFGEVQLGALLEQMMSPEQYD----ANVKTKK 196 Query: 236 RSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERY---FNAEDDYTRESALQEHIAS 286 + ++LP D + IDAK YE+Y F A D ES+ ++ + Sbjct: 197 SGTEFVEFAIKLPGKDDANSTVYLPIDAKFPKDIYEQYYDAFEAGDTALMESSGKQLENT 256 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 ++ + + K Y P T D+ +MF+P E + + R + T + I++ PT Sbjct: 257 IKKMAKDIHDK-YVDPPF--TTDFAIMFLPFESIYAEVIRRTSLVETLQKEYKIVVTGPT 313 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL L ++ +R + ++ + + F + + ++L A D + Sbjct: 314 TLGAILNSLQMGFRTLAIQKRTGEVWTVLGAVKTEFGKFGGLLEKVQKNLQSAGDQLEEV 373 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEE 449 M K A R + E L + ++EE Sbjct: 374 MGK------RTRAIERKLRQVEQLPHEESRKILPIDGIEEEEE 410 >UniRef50_A6GP11 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GP11_9BURK Length = 472 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 77/434 (17%), Positives = 161/434 (37%), Gaps = 34/434 (7%) Query: 19 GWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTS 78 L + +A+Q EE+ +L Q I + ++E L ++ + Sbjct: 41 QVLANLDEVMDAQAQQRFASEELGKQLRLLNQDIEARQSKQSEL--LTQTFAQARTESQQ 98 Query: 79 LEADLREVTT-RMEAAQQHADDKIRQMINSEQRLSEQFENLANRI---FEHSNRRVDEQN 134 L++V + Q +K+ Q + R + ++ +I E + + E N Sbjct: 99 AAHGLQQVIVGQFTQGNQLQSEKLNQFSETLHRTNTLIQDQLTQIRLSVEQKLKDMQEDN 158 Query: 135 RQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 L + + E+L ++ +SF + ++ + + +Q +A +L R Sbjct: 159 ASKLELMRKTVDEKLHATLETRLGESFKQVSERLEQVYKGLGEMQT----LATGVGDLKR 214 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD- 252 L + K++G WGEV L +LE + ++ I+ S + VRLP +D Sbjct: 215 VLT-NVKSRGTWGEVQLQALLEQ--MLTPSQFGRN--IKPVPGSHNIVEFAVRLPGKEDD 269 Query: 253 ----VVIDAKMTLVAYERYFNAEDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGL 305 + ID+K YER D + A + ++R + + K L Sbjct: 270 QPVWLPIDSKFPKEQYERLQECFDRADADGVAVASKALEMAIRAEAKTIAEK---YLAPP 326 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 T D+ ++F+P E + + R + + + + P TL L + ++ Sbjct: 327 YTTDFGILFLPTEGLYAEVVKRPGLVDDLQRLHRVTVAGPITLTTLLNALQLGFKTLALE 386 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 + + ++ S + + F D ++ +L++A N QA + Sbjct: 387 KRSSEVWTVLSAVKTEFGKFGDILAKTRDTLERAAKNIEQA-------ETRSRVMQRKLK 439 Query: 426 GLGVEIKREINPDL 439 G+ +++ L Sbjct: 440 GVDELPEKDAIELL 453 >UniRef50_B4S924 Putative uncharacterized protein n=2 Tax=Chlorobiaceae RepID=B4S924_PROA2 Length = 450 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 75/415 (18%), Positives = 162/415 (39%), Gaps = 27/415 (6%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 S + ++ RE+ + ++Q+ RAE + ++ + + S + Sbjct: 39 LQSIERFVREGIDSLRREQQEEFTRSRQEQVQALGDLRAEL--MASQRENRSELGNSFKT 96 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRI---FEHSNRRVDEQNRQSL 138 + Q+ + ++ ++ R+ + ++I E + EQN L Sbjct: 97 FEDSRRREVHEQQEFQRSRFSDLVAAQDRVRIETAATLDKIRDTVELRLASLQEQNAAKL 156 Query: 139 NSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 + + E+L +++ +SF + ++ + + ++ +A +L + L Sbjct: 157 EEMRVTVDEKLQATLEKRLSESFRQVSERLQKVHEGLGEMKS----LATGVGDLKKVL-S 211 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD----- 252 + KT+G GE+ L +L + L +++ ++ SR + + VRLP D Sbjct: 212 NVKTRGVLGEMQLQNIL--ASLLSPEQFDENIATR--EGSRERVEFAVRLPGKDDDGDVV 267 Query: 253 -VVIDAKMTLVAYERYFNAEDDYTR---ESALQEHIASVRNHIRLLGRKDYQQLPGLRTL 308 + IDAK L +Y R A + + A +E +R + + K L RT Sbjct: 268 LLPIDAKFPLESYYRLLEAGEKGDAALLKQASKEVETEIRRCAKEISDK---YLNPPRTT 324 Query: 309 DYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNA 368 D+ ++F+PVE F + L + NI++ PTTL L ++ +R + Sbjct: 325 DFGILFLPVEGLFAEVVRNTSLLELLQREYNIIVTGPTTLAALLNSLQMGFRTLAIQKRT 384 Query: 369 QQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 ++ S++ + F D ++ L +A + + + N L + Sbjct: 385 SEVWKVLSQVKGEFATFGDVLTRAQNKLTQASTEIDRLVGVRTRKIQNTLRSIDQ 439 >UniRef50_B0P9L0 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9L0_9FIRM Length = 439 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 74/403 (18%), Positives = 144/403 (35%), Gaps = 26/403 (6%) Query: 38 REEMVAELSAAKQQITQSEHWRAECELLNNEVRS-LQSINTSLEADLREVTTRMEAAQQH 96 R+ A + + S E L + + Q + L + + + Sbjct: 48 RQRTALSEEARQTRQESSRAAMEAVESLGRTLAAGQQQQSRELSIRQDSLQKTVAELTRG 107 Query: 97 ADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQ 155 D + Q + +EQ + E+ + E N L + + E+L+ + Sbjct: 108 IDGRFAQFMAQ----NEQQLSGIRSTVENRLSAMQEDNAAKLEQMRKTVDERLEKTLETR 163 Query: 156 VQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLE 215 + SF ++ + + +Q +A +L + L + KT+G GEV L +LE Sbjct: 164 LGQSFKMVSERLEQVYKGLGEMQT----LAAGVGDLKKVL-SNVKTRGLLGEVQLGAILE 218 Query: 216 ASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD----VVIDAKMTLVAYERYFNAE 271 +YET V+ D+R+ + V LP + + IDAK AY + A Sbjct: 219 DILAP--GQYETNVATRRDSRNP--VEFAVVLPGDGETPVYLPIDAKFPADAYIQLTQAY 274 Query: 272 DDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 D RE+ A + V+ R + K + T D+ +MF+P E + L Sbjct: 275 DLGDREAIDEAARLLKTRVKAFARDIRDK---YIDPPHTTDFAVMFLPFEGLYAQVLQLD 331 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 + +++ PTT+ L ++ ++ + + ++ + + F D Sbjct: 332 -LVEQLQRDYKVVVAGPTTMAALLNSLQMGFKTLAIQKRSAEVWQVLGAVKTEFNRFGDV 390 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 + Q L++A + + + LAQ Sbjct: 391 LETTQQRLEQAGSELDKLVGVRTRAIRRRLAQVGELPETDAAA 433 >UniRef50_C9M651 RmuC domain protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M651_9BACT Length = 439 Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats. Identities = 83/434 (19%), Positives = 176/434 (40%), Gaps = 29/434 (6%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEA 81 + +++ + + + + Q+ + + + + S Sbjct: 25 IWHVRLSRRDRDDALDMMIGLLQEEMKDQRAEALQRGAESSRDVRDALDSYGRRAAESFD 84 Query: 82 DLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSL 141 L + TR + + Q+++ +QRL EQ LA + R++ +N + ++ L Sbjct: 85 RLSGLQTRQMESLERH--TTDQLLSVQQRLGEQETKLA-----EALARLESENSRRVDEL 137 Query: 142 LSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 + E+L+ R++ DSF + + + + + +Q +A + +L R L G K Sbjct: 138 RQAVSERLETTLSRRLGDSFAQVSGQLEAVQRGLGEMQ----GLAGDVGDLQRTLTG-VK 192 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VV 254 T+G WGEV L +L +YE V+++ D+ + D +++P G + Sbjct: 193 TRGTWGEVQLESLLSQILAPA--QYERSVALDPDSAE--RVDFGLKIPTGDPDEPPLWLP 248 Query: 255 IDAKMTLVAYERYFNA---EDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 +DAK L +YER A D + +E I ++ + RK Y + P T D+ Sbjct: 249 LDAKFPLASYERLLAARERGDADGEAAGRRELIKALDLQAASV-RKKYVRPP--VTTDFA 305 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 L+F+P E + AL L + ++ ++ V PTTL L ++ +R SR + ++ Sbjct: 306 LLFLPSESLYAEALRDPSTLPSLQERHRVVPVGPTTLAALLNSLRLGFRALAISRRSGEV 365 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEI 431 + + F + + + + L A ++ + ++ + + + G E Sbjct: 366 WRILGDVKTEFARFGEVLERVRKQLGAAANSIEETGRRTRAMERRLEGVERSDEPEGREP 425 Query: 432 KREINPDLAEQAVS 445 + +A+ Sbjct: 426 EGPAPSHKKAEALR 439 >UniRef50_D1PNL6 RmuC domain protein n=2 Tax=Ruminococcaceae RepID=D1PNL6_9FIRM Length = 468 Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats. Identities = 80/436 (18%), Positives = 158/436 (36%), Gaps = 45/436 (10%) Query: 34 QLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAA 93 E + + +L A + + ++ A + + Q N S E R AA Sbjct: 61 LQGETDLLAEQLRAMQGETARTTT--ASLRDFSAVLAENQRQNASASTARLESIDRAGAA 118 Query: 94 QQHA--DDKIRQMINSEQRLSEQFENLANRI------FEHSNRRVDEQNRQSLNSLLSPL 145 +Q A D + Q+ E RL ++ A R+ + N + L+ + + Sbjct: 119 RQKAASDALLAQLTMLENRLKNLEDSNATRLDGVRGALVQGLNVIRADNNKKLDEIRGTV 178 Query: 146 REQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 E+L ++++ DSF + + + + +Q +A + +L + L G KT+G Sbjct: 179 EEKLQDTLQKRINDSFRTVSAQLEQVYKGLGEMQ----NLAADVGSLKQVLSG-VKTRGI 233 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK---DVVIDAKMTL 261 GEV L +LE +YET V+ S + + V+LP + IDAK Sbjct: 234 LGEVQLGAILEQILAP--GQYETNVATVP--GSNNRVEFAVKLPGQSGTVWLPIDAKFPG 289 Query: 262 VAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 Y A+ D + + + +R + + K + T + ++F+P E Sbjct: 290 DTYAHLQAAQQRGDAAATAAMRKALYSVLRQEAKDIHDK---YIEVPYTTSFGILFLPFE 346 Query: 319 PAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASK 377 + + + I + P+T+ L + +R I R+ + Sbjct: 347 GLYAEVVS--SGVTETLQRDYQITVAGPSTMAALLNALQMGFRTLA-------IQKRSGE 397 Query: 378 LYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRG-NVLAQAEAFRGLGVEIKREIN 436 ++ + + G L + Q + Q L G A + ++++ Sbjct: 398 VWTVLGAVKTEFEKFGAGLQQMQRHLNQTGSDLEELIGPRSRAITRKLEAV-----QQLD 452 Query: 437 PDLAEQAVSQDEEYRL 452 PD A + E+ + Sbjct: 453 PDTAAGLLGIQEDPKP 468 >UniRef50_D1B826 Putative uncharacterized protein n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B826_THEAS Length = 445 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 72/459 (15%), Positives = 171/459 (37%), Gaps = 43/459 (9%) Query: 1 MDFSIMVYAVIALVGVAIG---WLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEH 57 M++ ++ + + + + W+ + Q + ++ R E A + ++ Sbjct: 1 MNYLVLALSGLGVSAANLAVSIWILGRVRAQQGEVQRDIRRLEEALSREAGQVRMDMRSL 60 Query: 58 WRAECELLNNEVRSLQSINTSLE-ADLREVTTRMEAAQQHADDKIRQ-MINSEQRLSEQF 115 + ++ L+++ + + ++ ME+ Q ++ + + E S F Sbjct: 61 REELLKYQQDQRVELRNLVETSSIRQMDALSRGMESLGQGQASQLERILKGLEASSSRVF 120 Query: 116 ENLA-------------NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFG 161 + L + R+ N + L+ + + E+L G R++ ++F Sbjct: 121 QGLGTMNESVLSGLSRVQEVLAEGMERIRRGNEEKLDRMRDVVEEKLQGALERRLGEAFS 180 Query: 162 KEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLRE 221 ++ + + + +A + +L R L + K++G WGE+ L +LE + Sbjct: 181 SVSERLEKVHQGLGEM----RALASDVGDLKRVL-SNVKSRGIWGEIQLGNMLEQVMSPD 235 Query: 222 GYEYETQVSIENDARSRMQPDVIVRLPQGK---DVVIDAKMTLVAYERYF---NAEDDYT 275 +Y V + + + + + V+LP + + +D+K Y R A D Sbjct: 236 --QYGVNVQVVPGSSN--RVEFAVKLPGDESPVWLPLDSKFPQEDYHRLLSAQEASDPKG 291 Query: 276 RESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA 335 E A +E + R + K + T D+ +M++PVE + L P L Sbjct: 292 AEEARRELANRIVAEARSIRDK---YVCPPHTTDFAVMYLPVEGLYAEVLKA-PGLAERL 347 Query: 336 L-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQ 394 + + ++ P L L ++ +R R + ++ ++ +R F + + + Sbjct: 348 MTEFRVVPSGPMVLAALLNSLQMGFRTLAIQRRSGEVWKLLGQVKGDLRRFGEMLEKARR 407 Query: 395 SLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + A D +A +S + + L E + Sbjct: 408 KIQDAGDELDRA----ASRSRTMERRLRDVEELPEEAGQ 442 >UniRef50_Q0K8K3 RmuC family protein n=7 Tax=Bacteria RepID=Q0K8K3_RALEH Length = 495 Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats. Identities = 73/425 (17%), Positives = 158/425 (37%), Gaps = 31/425 (7%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 + AQQ + ++ + + + +L R L+ + L Sbjct: 69 RDESAQQMLRFQQALSSQLTGIATLQNNQIDTFA-QQLAKLTETNTRQLEQVRQHLMLQG 127 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 ++ + D ++Q + +E+ E + ++ N L + Sbjct: 128 QQARDEQAGTLRRFGDGLQQQLAQMSEANERRLAEVRATLEKKLQDIEANNAAKLEEMRR 187 Query: 144 PLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 + E+L +++ +SF ++ + + +Q +AQ +L + L + K++ Sbjct: 188 TVDEKLHATLEQRLGESFRLVSERLEQVHRGLGEMQ----VLAQGVGDLKKVLT-NVKSR 242 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK--------DVV 254 G WGEV L +LE E +Y V ++ + + + +RLP + Sbjct: 243 GTWGEVQLEMLLEQMLTPE--QYGKNVETVRNSGA--RVEFAIRLPGKAAGGDNAPVWLP 298 Query: 255 IDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 +DAK YER +A+ D + +E ++R + + K L +T D+ Sbjct: 299 VDAKFPKEQYERLVDAQERGDPDGVLAFGRELEVALRREAQTIAEK---YLSPPQTTDFA 355 Query: 312 LMFIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQ 370 ++F+P E + L R P L + + PTTL L ++ +R + + + Sbjct: 356 ILFLPTEGLYAEVLRR-PGLTDLMQRDYRVTVAGPTTLTALLNSLQMGFRTLALEKRSSE 414 Query: 371 IADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVE 430 + + + + F D ++ +L++A N QA + + L E Sbjct: 415 VWEVLGAVKTEFGKFGDVLAKTRDTLERAARNIEQA----EVRTRQMARKLRTVEALPGE 470 Query: 431 IKREI 435 +++ Sbjct: 471 AAQQV 475 >UniRef50_C1SK07 Uncharacterized conserved protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SK07_9BACT Length = 377 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 68/351 (19%), Positives = 148/351 (42%), Gaps = 11/351 (3%) Query: 80 EADLREVTTRMEAAQQHADDKIRQMI-NSEQRLSEQFENLANRIFEHSN---RRVDEQNR 135 E + ++ +S + +++F LA + + N + E + Sbjct: 26 RRARNESERELLRITDGMKGAFAELSMDSLSKNTDEFLKLAGNVMDSKNKEGEKDLEAKK 85 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 +++ L + +L+ + + + +I+N +++ +L +AL Sbjct: 86 ALIDAQLLNMSRELERVHLLMTGMEKEREARFSEIAQQIKNTVHQTEKLSDVTASLNKAL 145 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVI 255 + +G WGE + ++ +G++E Y+ Q ++ N + +PD LPQG V + Sbjct: 146 -ASSAERGRWGERMALDIIRTTGMKEKINYDVQKTMANGS----RPDFTFYLPQGFCVHM 200 Query: 256 DAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 D K L +Y ++ +E+ +E ++ I VR I+ + + Y TLD +L+FI Sbjct: 201 DVKFPLDSYLKFC-SEEGAGKEPHIKNFIRDVRQKIKDVKTRGYID-QQENTLDVMLLFI 258 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 P E + ++ P+++ A++ ++L SP +L L I + ++ Sbjct: 259 PNESVYEFIYEKDPQIMDIAMEAGVILTSPLSLFAVLAVIRQSVENFAFESTSGEMLKLF 318 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRG 426 K Y + F + +G+ +D+AQ +Y + + + L + E R Sbjct: 319 GKFYQQWDKFTAKLEMVGKKIDEAQKSYDELISTRRNMLEKPLEKIELLRS 369 >UniRef50_A4JCN2 Transcriptional regulator, Fis family n=26 Tax=Bacteria RepID=A4JCN2_BURVG Length = 491 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 74/414 (17%), Positives = 146/414 (35%), Gaps = 42/414 (10%) Query: 42 VAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE-VTTRMEAAQQHADDK 100 + + A Q + + + + ++ L + N +RE V + + A++ Sbjct: 79 QLQQTLATQLTSIATVQNNQIDGFAQQLAKLVAGNAQQFDAMRESVQRQAQQAREEQTVA 138 Query: 101 IRQMINSEQRLSEQFENLANR-------IFEHSNRRVDEQNRQSLNSLLSPLREQLD-GF 152 +R ++ R Q +R E + ++ N L + + E+L Sbjct: 139 LRLFGDTLNRQLTQLTEANDRRIGEVRATLEQRLKEIETNNAAKLEEMRRTVDEKLHATL 198 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 +++ +SF + + + +Q +A +L + L + KT+G WGEV L Sbjct: 199 EQRLGESFKLVSDRLEQVHRGLGEMQT----LAAGVGDLKKVLT-NVKTRGTWGEVQLEA 253 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK---------DVVIDAKMTLVA 263 +LE + +Y V+ + + + +RLP + IDAK Sbjct: 254 LLEQ--MLTPDQYAKNVATVPKSSE--RVEFAIRLPGRDAGTRDAAPVWLPIDAKFPRED 309 Query: 264 YERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 YER +A+ D E A + A VR R + K + T D+ L+F+P E Sbjct: 310 YERLIDAQERADAAAVEEAGRALEARVRMEARTIAEK---YVAPPHTTDFALLFLPTEGL 366 Query: 321 FLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLY 379 + L R P L + + PTTL L ++ +R + + ++ + Sbjct: 367 YAEILRR-PGLTDLLQRDYRVTVAGPTTLTALLNSLQMGFRTLAIEQRSSEVWQVLGAVK 425 Query: 380 DKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + F D ++ L+ + A + + Sbjct: 426 SEFGKFGDVLARTKAQLETVTRSIEAA-------EQRTRVMGRKLKQVEALPDE 472 >UniRef50_C7R4S1 Putative uncharacterized protein n=1 Tax=Jonesia denitrificans DSM 20603 RepID=C7R4S1_JONDD Length = 465 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 81/484 (16%), Positives = 175/484 (36%), Gaps = 52/484 (10%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 MD I+V + ++V + + L+ +E ++AA + Sbjct: 1 MDVLILVLVIASIVLGVVNLVAVRAGSHDTG---LSMQELESIRMAAAAGNGDIRQDLSV 57 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTR------------MEAAQQHADDKIRQ-MINS 107 + L+ + + T + RE R +E Q ++++ + S Sbjct: 58 QRTELSQTLAHQDAARTQAQTRFREDVERQLDEFAQRNALALEKIQAAVGERLQLSLSES 117 Query: 108 EQRLSEQFENLA----------NRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQV 156 R ++ + LA ++ ++ N L + + E+L +++ Sbjct: 118 RDRTTKVLQELAERNAVSHRELQQVLREELEKLRAGNEAKLEKMRETVDEKLQGTLEKRL 177 Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 DSF +Q + + +Q +A + L R L + K +G WGEV L+R LE Sbjct: 178 GDSFAIVSQRLEEVHKGLGEMQ----NLASDVGGLKRVLT-NVKNRGGWGEVQLSRQLED 232 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNA 270 RE +Y + I+ ++ + V++P + ID+K YER A Sbjct: 233 FLTRE--QYAENIIIKEHSQES--VEFAVKMPGRDPEGSEVYLPIDSKFPQEDYERLLEA 288 Query: 271 EDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 ++ R + + + +V + + K + R+ D+ +M++P E F + R Sbjct: 289 QELGDRAAIDASAKALERAVVEQAKKISDK---YISPPRSTDFAIMYLPTEGLFAEVVRR 345 Query: 328 QPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 + +++ PTTL+ L ++ +R + + ++ + R + D Sbjct: 346 PGLASRLQNDHRVLITGPTTLMSLLNSLQLGFRTLAIEKRSSEVWQILGAAKAEFRKYGD 405 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 +G+ L Q +A ++ + + +E D+ +D Sbjct: 406 VWEKLGKQLATTQRTVEEAGRRTRAVERRL----RTIETTEIESADTDVNDILALPGGED 461 Query: 448 EEYR 451 + Sbjct: 462 SDDE 465 >UniRef50_C7RC44 Putative uncharacterized protein n=2 Tax=Gammaproteobacteria RepID=C7RC44_KANKD Length = 501 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 76/403 (18%), Positives = 164/403 (40%), Gaps = 28/403 (6%) Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQ-----MINSEQRLSE 113 + + ++ + L +L+ ++ ++ ++E Q+ A +++ M + + ++ Sbjct: 119 QKVNDNTVSQQKELYQFKETLQKNILQLKDQIELNQKEALAMLQEQFRRGMKDVREEITL 178 Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 + A FE + + + + L + + ++L + +F + Sbjct: 179 NLKTQA-ENFEKNMSGLTKTTDERLKEISGQVEKRLADGFEKTTQTFQDVLKRLAL---- 233 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 I + Q+ +++ ++L L D +++G +GEV L ++ Y+ Q S N Sbjct: 234 IDDAQKKITELSSNVVSLQEIL-SDKRSRGAFGEVQLESLVSNV--MPTSHYKFQHSFSN 290 Query: 234 DARSRMQPDVIVRLPQGKDVV-IDAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHI 291 D + LP+ V+ +DAK L Y++ + E R+ A + I ++ H+ Sbjct: 291 GK----IVDCALFLPEPTGVIGVDAKFPLENYQKMVDVERSGPERDQAHKAFIKDIKKHV 346 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + K + T +MFIP E F PEL+ A + + +VSPTT++ Sbjct: 347 NDIASK---YIIDQETAVGAVMFIPAEAVFAEIHAHHPELVEFAQQQKVWMVSPTTMMAL 403 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 L T + + + E + I + L F MS + + ++ D+ +KK++ Sbjct: 404 LTTASAVLKDEATRKQVHIIQEHLGYLSKDFGRFRTRMSDLARHINNVSDD----VKKVT 459 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRS 454 + ++ E VE+ E + E A + E + S Sbjct: 460 ISADKISSRFEKIEQ--VELNHEDHEHSIEVAATAKIENKKDS 500 >UniRef50_B6YRP9 DNA recombination protein rmuC homolog n=1 Tax=Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 RepID=B6YRP9_AZOPC Length = 446 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 160/427 (37%), Gaps = 33/427 (7%) Query: 24 SYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADL 83 + REE+ + L +++++ ++ E+LN E +S+Q + Sbjct: 34 RRNRDENNKSAKDSREELSSSLKMNREELS--KNISNFSEILNREFKSIQDSVSMANKYG 91 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 RE + + + ++K I+S + + E + + N L + Sbjct: 92 RE---ELTKSLKDFEEKFSARIDSLAKDTNIVFEKNRETIEKKLTEIQKNNSAKLEEMRK 148 Query: 144 PLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 + E+L + +SF + L I + +A +L + L + KT+ Sbjct: 149 TVDEKLHDTLEERFTESFKSVSNTLDKLQRGIGEM----RNVASNVGDLRKVL-SNVKTK 203 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVID 256 G GE L +LE L +Y V ++ ++ + +++P K+ + ID Sbjct: 204 GVLGEYQLAAILEQ--LLPPSQYAKNVKTKSGSKEN--VEFAIKIPSKKETHEFIWLPID 259 Query: 257 AKMTLVAYERYFNAEDDYT---RESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLM 313 AK YE ++ + E + ++ ++ + + K + T ++ +M Sbjct: 260 AKFPTADYESLMSSYETADLQMIERSKKDLETKIKKFAKDIHEK---YIDPPNTTEFAIM 316 Query: 314 FIPVEPAFLLALDRQPELITEAL-KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIA 372 F+P E + L R P L + I + PTT+ L ++ +R + +I Sbjct: 317 FLPFEGLYAEVL-RIPNLFQSIHVEFKITIAGPTTISAFLNSLQMGFRSLAVEKRTSEIW 375 Query: 373 DRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIK 432 D + + F + + A + LD A + + + + + E + L Sbjct: 376 DLLGAVKTQFSKFAEVVEAAKKKLDSASEELAKTGIR----SRQIEKKLENVQSLPEPDS 431 Query: 433 REINPDL 439 +++ DL Sbjct: 432 QKLLGDL 438 >UniRef50_B0VIW8 DNA recombination protein rmuC homolog n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIW8_9BACT Length = 459 Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats. Identities = 72/417 (17%), Positives = 161/417 (38%), Gaps = 30/417 (7%) Query: 27 HAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREV 86 + AE + +++ A+ ++ ++ + EL N+ Q IN + E Sbjct: 56 LRTELLSISAENRKELSDSIKAQNEVLIAQTTASREELNNSFNTLKQQINNDSAVNREEQ 115 Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 + ++ ++ +IN +Q Q + + E ++ + N L + + Sbjct: 116 KKALNDLSENFTRRMTDLINIQQ----QEAETSRKTLETKMEQIRQNNETKLEQMRQTVD 171 Query: 147 EQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNW 205 E+L +++ +SF + ++ + + +Q +A +L +AL + K QG Sbjct: 172 EKLHDTLEKRLGESFKQVSERLELVHKSMGEMQS----LANGVGDLKKALT-NVKRQGVL 226 Query: 206 GEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------VVIDAKM 259 GE+ L +LE E YE + + + + +RLP + + IDAK Sbjct: 227 GEIQLANLLEDILTPEQYE----KNFRPNKNRDEKVEFAIRLPGSSEKEEFVYLPIDAKF 282 Query: 260 TLVAYERYFNAED---DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 + Y+ NA D E+A + + ++N + + K + T D+ ++F+P Sbjct: 283 PIADYQNIMNAYDMGDLAEVENARKSMVQRIKNCAKDIRDK---YINPPVTTDFGMLFLP 339 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E + L T ++++ PTT + ++ +R + ++ + Sbjct: 340 FEGLYAEVLRSPGLFETIMRDYHVIICGPTTTAAVINSLQVGFRTLAIQKKTSEVWKILA 399 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKR 433 + + F + + L +A +N +A S + + + + L VE Sbjct: 400 SIKLEFGKFGTILEQTQKKLQEASNNIEKA----SYRSRQIEKRLDKVQELPVEEAE 452 >UniRef50_B6R8T4 RmuC domain protein n=1 Tax=Pseudovibrio sp. JE062 RepID=B6R8T4_9RHOB Length = 413 Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats. Identities = 70/382 (18%), Positives = 143/382 (37%), Gaps = 21/382 (5%) Query: 79 LEADLREVTTRMEAAQQHADDK---IRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNR 135 L A L V Q+ A D + +++ S+ ++ + + +A +F + Sbjct: 43 LRAKLNRVRVTSALEQKQAADTEAALAELVRSQGEMTGRMQTMA-EVFGSRQSDLMRVVN 101 Query: 136 QSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRAL 195 L+ L L + RQ S + L + + + +A + +L L Sbjct: 102 DRLDGLGKTLGASVLETHRQTHASLTGLQERMALLDKANKTMGE----LAGQVTDLQMVL 157 Query: 196 KGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-QGKDVV 254 D +++G +G+ + +++ + + Q ++ N R +PD ++ +P +V Sbjct: 158 -NDKQSRGAFGQGRMEAIIDDA--LPPTSFSFQSTLSN----RSRPDCLIHMPTGAPPLV 210 Query: 255 IDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 +DAK L A+ +AE + A + H+ + K L T D LMF Sbjct: 211 VDAKFPLEAFAAIKDAETKPELKEAANRFRKDISKHLEDIAGK---YLLPGETQDTALMF 267 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 +P E F + P+L +A + +++VSP+ L++A++ I ++ R A I Sbjct: 268 VPSESLFAEIHEGFPDLTQKAHRLRVVIVSPSLLVLAVQVIQSVLRDARMREQAHLIQAE 327 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 KL + + +S + + + Q M E LG + Sbjct: 328 VGKLLLDVGRLTERVSKLQNHFAQTNKDLDQIMISGDKISNRARKIDEM--QLGGKASEP 385 Query: 435 INPDLAEQAVSQDEEYRLRSVP 456 + ++ + P Sbjct: 386 VTSSASQAPQTTHLADDELPSP 407 >UniRef50_B9CM15 RmuC domain protein n=1 Tax=Atopobium rimae ATCC 49626 RepID=B9CM15_9ACTN Length = 440 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 73/455 (16%), Positives = 171/455 (37%), Gaps = 26/455 (5%) Query: 2 DFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAE 61 D I++ A A + AI + + ++A +++ +E+ ++Q + Sbjct: 4 DTLILIVAAGAALVAAIFAGMSWSRTKDISGSEVAINQKIDSEMRHTREQ------SQVA 57 Query: 62 CELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANR 121 + L+ + ++ + SLE + + + + Q Sbjct: 58 VDGLDRRLVTMTNKVDSLERAMADFQAKTSKELGDVRVAQEKGRADMQAGISTTLKGVQD 117 Query: 122 IFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 + + N +SL + + + ++L ++ SF + ++ + + Sbjct: 118 SVSQQLIAIRQDNGKSLEQIRATVDDKLQKTLNDRISKSFEMVNNQLDAVSKGLGEM--- 174 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 MA+ +L + L + KT+G GEV L +LE E +Y+T V+ D+ + + Sbjct: 175 -RGMAESVGDLRKVL-SNVKTRGIVGEVQLGAILEEVLSPE--QYDTNVATVPDSSN--R 228 Query: 241 PDVIVRLPQGKD----VVIDAKMTLVAYERYFNAEDDYTR---ESALQEHIASVRNHIRL 293 + V++P D + IDAK Y R +A+D E+A +E +++ + Sbjct: 229 VEFAVKIPGKDDEFVYLPIDAKFPGETYGRLEDAKDTGDAASVETAWKELETRLKSEAKD 288 Query: 294 LGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALR 353 + K + T + ++F+P E + ++R + + ++ + P+T+ L Sbjct: 289 IHEK---YVAPPATTSFAILFLPFEGLYAEVVNRTGLVEQIQREWHVNVAGPSTVAALLN 345 Query: 354 TIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSG 413 + ++ + A +I S + ++ + ++ + L A + + Sbjct: 346 AVQMGFQTVAIQKRADEIQKVLSAVKAELPKYRRELEKAQKQLSTASKTIDGLVGTRTRA 405 Query: 414 RGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDE 448 L A L + D ++ S+DE Sbjct: 406 MERTLKGVTAIGSLSEADELLGIDDDGDEVESKDE 440 >UniRef50_A8SND8 Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SND8_9FIRM Length = 403 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 78/440 (17%), Positives = 164/440 (37%), Gaps = 42/440 (9%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M++ + ++ ++ + L + +E++ + K ++ S+ + Sbjct: 1 MNYLLTGVLILLVIFAIVLILKLLKKS----------NDEIIKDEDILKLKLGFSDEFNK 50 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E LN + N LE ++A +++ D + L + F NL Sbjct: 51 LNEKLNGNNEKI--SNQLLEFKNSTNDNILKAGKENIDSIFNFNDKLKSELKKDFLNL-- 106 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQL 180 L+ + + +L+ + +F Q L + ++ L Sbjct: 107 ----------TVVVEGRLDKINESVEVKLEKSFEDTKKTFSNVMQSLGRLDEAQKKMEFL 156 Query: 181 NAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQ 240 + + LT D KT+G +GEV L +VL ++ Y+ Q + N Sbjct: 157 SNNVQNLNNVLT-----DKKTRGIFGEVQLYQVLSSAFGNNSEIYQKQYKLSNGT----M 207 Query: 241 PDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDY 299 D ++ P+ + ID+K L Y R F + E+ + +++ HI + K Sbjct: 208 ADAVIFAPEPVGTICIDSKFPLENYRRIFEDISENKLEN-EKNFEQNLKKHIDDISSK-- 264 Query: 300 QQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLW 359 + T D ++F+P E F P+ + A + + SPTT++ L TI + Sbjct: 265 -YIIKNETTDQAILFLPAEAIFAYLNAYMPKTVEYAYSRRVWITSPTTMMAILTTIQAVS 323 Query: 360 RYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + QS+ A +I + L D+ + + + ++K + +K + + + Sbjct: 324 QNLKQSQYALEIQKELNSLSDEFERYAKRWETLEKDINKVSKD----VKDIFTTSTKITR 379 Query: 420 QAEAFRGLGVEIKREINPDL 439 + + + + V K E L Sbjct: 380 RFDNIKNVDVFEKEEAEEVL 399 >UniRef50_B2T5V8 Putative uncharacterized protein n=7 Tax=Burkholderiales RepID=B2T5V8_BURPP Length = 482 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 73/445 (16%), Positives = 153/445 (34%), Gaps = 36/445 (8%) Query: 22 FASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA--ECELLNNEVRSLQSINTSL 79 R E + + +Q + + ++ + L ++ SL Sbjct: 57 LERQLRNDIAETARVSRTEQSSGFAHFQQTLAAQFSSMTTVQAGKIDGFAQQLDAVRHSL 116 Query: 80 EADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLN 139 +A ++ + + D + + +++ E + ++ N L+ Sbjct: 117 QAQAQQARDEQGRSLKQFGDTLSLQLGQLTEANDRRFAEVRATIEQRLKDIEANNSLKLD 176 Query: 140 SLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGD 198 + + E+L +++ +SF + + + +Q +A +L + L + Sbjct: 177 EMRRTVDEKLHATLEQRLGESFKLVSDRLEQVHRGLGEMQT----LAAGVGDLKKVLT-N 231 Query: 199 NKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD------ 252 KT+G WGEV L +LE + +Y ++ RS + + ++LP + Sbjct: 232 VKTRGTWGEVQLEVLLEQLLTAD--QYAKNIATVP--RSAERVEFAIKLPGRAEQGASAT 287 Query: 253 ---VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 + IDAK YER A+ D E A + A +R R + K + Sbjct: 288 PVWLPIDAKFPREDYERLIEAQERADPVAVEEASRALEARIRAEARTIAEK---YVSPPH 344 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELIT-EALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 T D+ L+F+P E + L R P L + + PTTL L ++ +R Sbjct: 345 TTDFALLFLPTEGLYAEVLRR-PGLTDLLQRDYRVTIAGPTTLTALLNSLQMGFRTLAIE 403 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 + + ++ + + F D ++ L+ + A + R Sbjct: 404 KRSSEVWQVLGAVKTEFGKFGDVLAKTKAQLETVTRSIEAA-------ETRTRVMSRRLR 456 Query: 426 GLGVEIKREINPDLAEQAVSQDEEY 450 + E + L + D + Sbjct: 457 DVEALPGEEASGLLGDALSGVDPDE 481 >UniRef50_D1Y818 RmuC domain protein n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y818_9BACT Length = 434 Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats. Identities = 65/358 (18%), Positives = 141/358 (39%), Gaps = 23/358 (6%) Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 E L + +N +L A +T + A D+I ++ L+ + Sbjct: 48 EQSEEALRRSSEMRRELNETLRASSMSLTESVRAIGDLQADRIERLEKRSGDLNAAVDKR 107 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNL 177 + +N+ L + + + E+L +++ SF ++ + + + Sbjct: 108 L-ESLRTDLLGLRRENQSQLEKIRAGVEERLQETIDKRLGSSFALVQRQLEAVQKGLGEM 166 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + +A +L R L + K +G+WGEV L +LE E +Y V+I D++ Sbjct: 167 RS----LAGSVGDLKRVLT-NVKVRGSWGEVQLRAILEQILSPE--QYAANVAIRPDSQE 219 Query: 238 RMQPDVIVRLPQGKD------VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASVR 288 + + VRLP G D + ID+K L Y R +A D+ + +A + + Sbjct: 220 --RVEYAVRLPGGGDGAPPVWLPIDSKFPLEDYHRLCDASSRGDEQSAAAARAALLRVLE 277 Query: 289 NHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTL 348 + + + K + + D+ L+F+P+E + L K +++ P TL Sbjct: 278 SEAKDVCEK---YIAPPHSTDFALIFLPIEGLYAEVLRDPAAAERLQRKYRVVVAGPATL 334 Query: 349 LVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 L ++ +R + + ++ + + + + F + + + L+ A + + Sbjct: 335 AALLSSLRMGFRTLAIQQRSGEVWELLASVRGEFGKFGEALDKARRQLNAAASSIEET 392 >UniRef50_B6GAF4 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GAF4_9ACTN Length = 461 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 71/423 (16%), Positives = 152/423 (35%), Gaps = 21/423 (4%) Query: 13 LVGVAIGW-LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRS 71 L G A+ + A + A ++ E EE A + N+ S Sbjct: 35 LAGCAVVLSVRARKERAAREEEVARTAEEASRAREALGAANAALSQLSVTLHAVLNQASS 94 Query: 72 LQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVD 131 L I + + A ++ Q ++ + EQ + + + Sbjct: 95 LSIIEQQHFEATQRSFDQTAAKVDDVRREVSQQLDLNRDSVEQRLDKVRETVDAQLGAIR 154 Query: 132 EQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAIN 190 + + L ++ + E+L ++ SF + + + + + ++Q +A + Sbjct: 155 GDSERKLEAIRVTVDEKLAATLNDRLGASFKQVSDQLEAVYRGLGDMQS----IAAGVGD 210 Query: 191 LTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP-- 248 L R L + KT+G GEV L +L + +Y V+ + S + + V+LP Sbjct: 211 LKRVL-SNVKTRGILGEVQLGAILADILTPD--QYAENVATKP--GSSERVEFAVKLPVE 265 Query: 249 --QGKDVVIDAKMTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLP 303 + + ID+K YER +A D E +A + ++ + + K L Sbjct: 266 AGEPVWLPIDSKFPGDTYERLRDAMDAGDAEGIAAARRALEQVIKLEAKDISSK---YLS 322 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 T ++ +MF+P E + +DR + + + P+T+ V L ++ ++ Sbjct: 323 VPETTNFGIMFLPFEGLYAEVVDRPGLIECLQRDYQVNVAGPSTMAVILNSLQMSYQTFA 382 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 R A +I S + + + ++ + ++ A + ++ L A Sbjct: 383 FQRRADEIQKVLSAVKAEFPKYQAELRRALKQIETAGKTVDGIINTRTNVIERKLKSVTA 442 Query: 424 FRG 426 Sbjct: 443 LED 445 >UniRef50_B6JJP9 RmuC domain protein n=13 Tax=Rhizobiales RepID=B6JJP9_OLICO Length = 400 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 74/379 (19%), Positives = 152/379 (40%), Gaps = 24/379 (6%) Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 A R + ++ + +R + R+ E + LA R E + + L+S Sbjct: 46 AVAMAQAIRADEMEERLSEVLRIQNEAAGRVHEMGQALAGRQTEMARA-----VNERLDS 100 Query: 141 LLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNK 200 + + + ++ R +S + I N + + + L L + + Sbjct: 101 VTQRVGQSMEQTTRNTMESLRALHERLGI----IDNAHKNLTDLTTQVTTLRDVL-ANKQ 155 Query: 201 TQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMT 260 +G +G+ + +++ GL +G + Q ++ N+ +PD +V LP + + IDAK Sbjct: 156 ARGAFGQARMEAIVQD-GLPKGA-FAFQHTLSNNK----RPDCVVFLPDQRPLCIDAKFP 209 Query: 261 LVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPA 320 L A A+ D R+ A Q V H+ + K L T D LMF+P E Sbjct: 210 LEAVTALREAKSDDARKLAAQRLRQDVMKHVSDIAGK---YLIAGETQDTALMFVPSESV 266 Query: 321 FLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYD 380 + D +++ +A + I+LVSP+ L++A++ + + + A QI + Sbjct: 267 YAEIHDGFDDVVQKAYRARIVLVSPSLLMLAIQVMQQIMKDARMRDAADQIRTEVMNMMG 326 Query: 381 KMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLA 440 + D +S +G D+ ++ RQ + ++ + +A L + +P A Sbjct: 327 DVERLRDRVSKLGSHFDQVSEDVRQVLISVN----KIGKRAVKIEELDFGQTEDASPP-A 381 Query: 441 EQAVSQDEEYRLRSVPEQP 459 + + + R++ Sbjct: 382 DSTPTDLFPSQPRALQAGE 400 >UniRef50_Q0G6U8 Putative uncharacterized protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G6U8_9RHIZ Length = 390 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 69/326 (21%), Positives = 137/326 (42%), Gaps = 16/326 (4%) Query: 98 DDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQ 157 + + ++ ++ L+ + + + + + L+ L S + + + + Sbjct: 65 AEGLDAVLRAQSELAGRLQTM-TEVLGSRQAELTSTLAGRLDGLTSSVGRSIMATGSETK 123 Query: 158 DSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEAS 217 D+ + I + Q Q+A L L GD +++G +GE+ + ++ + Sbjct: 124 DTLSALGERLAI----IDDAQNRIGQLASGISKLQDIL-GDKQSRGAFGELRMQTIVADA 178 Query: 218 GLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAEDDYTR 276 G Y Q ++ N +PD ++ +P G +V+DAK L AY AE + Sbjct: 179 LPANG--YRMQATLSNGK----RPDCLIEMPNGAPPLVVDAKFPLDAYAALSAAETPEAK 232 Query: 277 ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEAL 336 + A+ + HIR + K L TLD LMF+P E F L + P++I +A Sbjct: 233 QFAMSRMRRDMDVHIRAVSAK---YLIPNETLDTALMFVPSETIFALLGESFPDIIQKAF 289 Query: 337 KNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSL 396 + +++VSPT L+++++ I NL + A +I L +++ D +SA+ Sbjct: 290 RARVVIVSPTLLMLSIQVIQNLLKDARVREEASRIQRETQHLGEEIARLNDRVSALKNHF 349 Query: 397 DKAQDNYRQAMKKLSSGRGNVLAQAE 422 ++ + Q + V E Sbjct: 350 GRSARDIDQILISTEKIVRRVDRIGE 375 >UniRef50_A4XHH9 Putative uncharacterized protein n=2 Tax=Clostridia RepID=A4XHH9_CALS8 Length = 430 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 68/421 (16%), Positives = 164/421 (38%), Gaps = 34/421 (8%) Query: 40 EMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADD 99 + + ++ + + ++ E ++ +Q+ +S + L + + Q+ D Sbjct: 31 RAEEKFESIEKMLDKLQNLT--LEQISQNRSEVQNTISSFGSLLMSRFSDFSSFQKSQFD 88 Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQD 158 I + S++ + + ++ EQN + L + + L ++ + Sbjct: 89 SFSNQILNLTTTSQEKLEAIRKEVDSKLSQIQEQNERKLEQIRQTVDSHLQQTLEAKLGE 148 Query: 159 SFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG 218 SF ++ + + +Q +A +L R L + K +G GE+ L +++ Sbjct: 149 SFKLVSERLELVHRGLGEMQ----ALANGVGDLKRIL-SNVKVRGTLGEIQLGNIIDQI- 202 Query: 219 LREGYEYETQVSIENDARSRMQPDVIVRLPQGK-------DVVIDAKMTLVAYERYFNAE 271 + +YE V I+ + Q + +++P + ID+K + +YER +A+ Sbjct: 203 -LDTSQYERNVRIKPHTQE--QVEFAIKIPSKNSNENEFIYLPIDSKFPIESYERLLDAQ 259 Query: 272 DD---YTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 + +E S++ + + + K + RT D+ +MF+P E + L R Sbjct: 260 EKNNIDEISKFSKELENSIKQNAKTIKEK---YIDPPRTTDFAIMFLPTEGLYAEVL-RI 315 Query: 329 PELITE-ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFID 387 P L + +++ PTT+ L ++A ++ + ++ + S + + F + Sbjct: 316 PGLFEYVQREYKVIIAGPTTISAILNSLALGFKTIAIEKRTSEVWELLSAVKTEFSKFGE 375 Query: 388 DMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQD 447 + + + L +AQD A KK + + + E + +++ Sbjct: 376 VLEKVKKKLLEAQDTIDTAAKKTRTIE-------RKLKNVESLSSDEAAQKVLYSDETEE 428 Query: 448 E 448 E Sbjct: 429 E 429 >UniRef50_A1WJL3 Putative uncharacterized protein n=9 Tax=Comamonadaceae RepID=A1WJL3_VEREI Length = 621 Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats. Identities = 68/403 (16%), Positives = 152/403 (37%), Gaps = 25/403 (6%) Query: 26 QHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLRE 85 + Q E A E+ + E A T+ + ++ ++ LEA+ + Sbjct: 209 ESRQAMGESAALFEQRIQERFEALTAGTRQTLDSLKGDVQAQLGSMANALKNQLEANGLQ 268 Query: 86 VTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPL 145 +T + Q ++ ++ +EQ N + N L ++ + Sbjct: 269 ITNQFSVLQDAVSQQLAGLVQGSGHNAEQLRN----TLNERLAAIQADNASKLEAMRRTV 324 Query: 146 REQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGN 204 E+L +++ +SF ++ + + +Q +A +L R + + K++G Sbjct: 325 DEKLHATLEQRLGESFKLVSERLEQVHKGLGEMQT----LAGSVGDLKRVMT-NVKSRGT 379 Query: 205 WGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VVIDAKM 259 WGE+ L ++E E ++ V + + +RLP D + IDAK Sbjct: 380 WGEMQLGAIIENVLTPE--QFARNVKTVPGSDEL--VEFAIRLPGKSDEHPVWLPIDAKY 435 Query: 260 TLVAYERYFNAEDDYTRESAL---QEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 + Y+R +A+D + + SVR R + K + T D+ ++++P Sbjct: 436 PVEQYQRLLDAQDAADKAAIASAGNAFETSVRLEARKIFAK---YVSPPHTTDFAVLYLP 492 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E F + R + + +M+ P L L ++ +R + + ++ Sbjct: 493 TESLFAEVMRRPGLVEAVQNECRVMITGPANLAAMLNSLQMGFRTLAIEKRSSEVWSLLG 552 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + + F + + A +S+D A + + + + + + A Sbjct: 553 SVKTEFAKFGEAVEATKKSIDTAAKKFDEVGVRTRAIQRRLRA 595 >UniRef50_A9NE59 Putative RmuC protein n=1 Tax=Acholeplasma laidlawii PG-8A RepID=A9NE59_ACHLI Length = 364 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 72/331 (21%), Positives = 136/331 (41%), Gaps = 11/331 (3%) Query: 92 AAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG 151 QQ KI + + ++ + E + E LN L + ++++ Sbjct: 29 RQQQEILSKIEYLKTDFKTELDKQNLQSQLELERTINYFKEAISTKLNVDLQSMNDKVET 88 Query: 152 FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLT 211 ++ S K I Q+ ++ +L L D K +G +GE+ L Sbjct: 89 RLKEGFQSSDKLFSSMLEKLTIIDTTQKNIENLSGHVNDLKSYL-SDKKLRGMYGELQLY 147 Query: 212 RVLEAS-GLREGYEYETQVSIENDARSRMQPDVIVRLPQGK-DVVIDAKMTLVAYERYFN 269 ++LE G + Q + N D IV ++ ID+K +L Y R ++ Sbjct: 148 QILENVFGENNKTLFTKQHKLSNQT----VVDAIVYGSGDALNIPIDSKFSLENYIRMYD 203 Query: 270 AE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 + +D R++A + +++ HI + + + T DY LMFIP E F Sbjct: 204 SNLEDSERKNASKLFEQNIKKHIDDIASR---YIIKNETTDYALMFIPSEAVFSEIQANY 260 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 L+ A K + + SPTTL+ L I + + + +NA+++ D +KLY+ RL + Sbjct: 261 IHLVEYASKKKVWITSPTTLVYMLTMILVINQDLEKEKNAEKMLDEINKLYNDFRLVFER 320 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLA 419 + + + + + ++ R M ++ NV Sbjct: 321 FNTLEKDIQRLSESIRTLMIPMNRLNKNVYK 351 >UniRef50_A3HRV1 Putative DNA recombination-related protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HRV1_9SPHI Length = 414 Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats. Identities = 67/429 (15%), Positives = 152/429 (35%), Gaps = 38/429 (8%) Query: 8 YAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNN 67 + +I ++ V LF K E + E+ ++ + Q Sbjct: 5 FILILVIIVQAIALFLLLLKKNGKGEIDLLKNELKQLSEEMEKALAQ------------- 51 Query: 68 EVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEH-- 125 + + N +L R V A+ + + +++ + ++F +L FE Sbjct: 52 ---ARRESNENLITQFRLVFDNQRASSRDQSEALKRFGEVFSKNVQEFNSLQKEKFEDLN 108 Query: 126 -SNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQ 183 + + L + + E+L ++ SF + + + + +Q Sbjct: 109 RRQEDLMKTTELRLEKIRETVDEKLQKTLESRLGQSFEMVSNQLQAVQKGLGEMQS---- 164 Query: 184 MAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDV 243 +A +L R L + K++G GE L +LE + +Y +I R + + Sbjct: 165 LANGVGDLKRVL-SNVKSRGVLGEYQLQAILENVLTPD--QYILNAAI--GKSGRERVEF 219 Query: 244 IVRLPQGKD---VVIDAKMTLVAYERYFNAED---DYTRESALQEHIASVRNHIRLLGRK 297 V++P + + ID+K +Y R +A + E A + I +V+ + K Sbjct: 220 AVKMPGNEHQVLLPIDSKFPQESYLRLVDAYEQVNKREIEIARMDLIKAVKKSAADIRDK 279 Query: 298 DYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIAN 357 + + D+ ++F+PVE + L + +++ PTTL L ++ Sbjct: 280 ---YIQVPYSTDFAILFLPVESLYAEILREPGLSQQIQQEYKVLVTGPTTLAAILNSLQM 336 Query: 358 LWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 +R + + ++ + + F D + + L +A + + + Sbjct: 337 GFRTLAIQKRSSEVWQILGAVKSEFGKFEDLIVKTQKKLGEANSELDKLVGARTRAIQRK 396 Query: 418 LAQAEAFRG 426 L + + Sbjct: 397 LKEVQELPE 405 >UniRef50_A6SXN7 Uncharacterized conserved protein n=8 Tax=Bacteria RepID=A6SXN7_JANMA Length = 493 Score = 191 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 77/433 (17%), Positives = 153/433 (35%), Gaps = 34/433 (7%) Query: 21 LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE 80 L Q Q Q + + + Q + + + + ++ L N Sbjct: 62 LREQVQSTAQSTRQELGSNFTQFQQALSTQMTSVATLQNNQIDSFAQQLAKLNEANAQQL 121 Query: 81 --------ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDE 132 A + A +H D + Q + + + Q E + + Sbjct: 122 EAMRLAIGAQAQAGREEQATALKHFGDTLNQTLTTLTESNAQRMAEVRATLEAKIKDLQT 181 Query: 133 QNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 N L + + E+L +++ +SF + + + +Q Q+A +L Sbjct: 182 DNGTRLEEMRKTVDEKLHATLEQRLGESFKLVSDRLEKVHQGLGEMQ----QLAIGVGDL 237 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGK 251 R L + KT+G WGEV L +LE + +Y V + + ++LP Sbjct: 238 KRVLT-NVKTRGTWGEVQLEMLLEQVLTPD--QYAKNVETVPGTGE--RVEFAIKLPGTD 292 Query: 252 D------VVIDAKMTLVAYERYFNAEDDYTRES---ALQEHIASVRNHIRLLGRKDYQQL 302 D + IDAK YER A D + A +E VR + + K L Sbjct: 293 DGQTPIWMPIDAKFPKEQYERLAEAADRADADGVSLAGRELERVVRFEAKKIAEK---YL 349 Query: 303 PGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYE 362 T D+ ++F+P E + + R + + + P+TL L ++ +R Sbjct: 350 SPPLTTDFAILFLPTEGLYAEVMRRPGLADDLQRTHRVSIAGPSTLSALLNSLQMGFRTL 409 Query: 363 HQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + + ++ + + F D ++A +L++A N QA + + + + Sbjct: 410 ALEKRSSEVWQVLGAVKTEFGKFGDVLAATKATLERAAKNIEQA----ETRSRQMTRKLK 465 Query: 423 AFRGLGVEIKREI 435 + L E +++ Sbjct: 466 SVEALPSETAQQL 478 >UniRef50_B2IM63 Competence-induced protein Ccs50 n=69 Tax=Streptococcus RepID=B2IM63_STRPS Length = 432 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 69/411 (16%), Positives = 162/411 (39%), Gaps = 39/411 (9%) Query: 21 LFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLE 80 LF +Q ++ + L++ + + Q+ + L+ + + +++ L+ Sbjct: 30 LFLIWQRQDRQEKHLSK--SLEDQADHLSDQLDYRFDQARQASQLDQKDLEV-AVSDRLQ 86 Query: 81 ADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNS 140 E+ + +Q D + Q + +H + + E N Q L Sbjct: 87 EVRIELHQGLTQVRQEMTDNLLQTRDK---------------TDHRLQALQESNEQRLEQ 131 Query: 141 LLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDN 199 + + E+L+ + ++Q SF +++ ++ + +Q +A++ L + L G Sbjct: 132 MRQTVEEKLEKTLQTRLQASFETVSKQLESVNRGLGEMQT----VARDVGALNKVLSG-T 186 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD-----VV 254 KT+G GE+ L +++E +YE + + S + + ++LP D + Sbjct: 187 KTRGILGELQLGQIIEDIMTPA--QYEREYATV--ENSSERVEYAIKLPGQGDQEYVYLP 242 Query: 255 IDAKMTLVAY---ERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYV 311 ID+K L Y E + D E + +ASV+ + + K + RT ++ Sbjct: 243 IDSKFPLADYYRLEEAYETGDKDEIERCRKSLLASVKRFAKDIKSK---YIAPPRTTNFG 299 Query: 312 LMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQI 371 ++F+P E + + + I++ P+TL L +++ ++ + ++A I Sbjct: 300 ILFVPTEGLYSEIVRNPVFFDDLRREEQIIVAGPSTLSALLNSLSVGFKTLNIQKSADHI 359 Query: 372 ADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + + + + F + + L A N + + + + L E Sbjct: 360 SKTLASVKTEFGKFGGILVKAQKHLQHASGNIDELLNRRTIAIERTLRHIE 410 >UniRef50_Q2RP03 Putative uncharacterized protein n=4 Tax=Alphaproteobacteria RepID=Q2RP03_RHORT Length = 392 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 67/355 (18%), Positives = 133/355 (37%), Gaps = 25/355 (7%) Query: 90 MEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQL 149 + AAQ ++ QM S+ + L + R+V + + L + E L Sbjct: 54 LAAAQVEMAGRLGQMAKSQAAAT----ALLADRLQSQERQVSRVLDERITDLTRRVGEGL 109 Query: 150 DGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVV 209 + +S T+ +N+ +++ +M +L L + + +G G+ Sbjct: 110 QRSTEKTAESMQDLRARLATIDAAQKNIAEMSEKMT----SLQDIL-SNKQARGAMGQTQ 164 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYF 268 + ++ L Y Q + N D ++ LP + IDAK L +Y Sbjct: 165 MEDLVRD--LLPPSAYRFQAKMGNG----RIADCLLTLPNPPGAIAIDAKYPLESYRALR 218 Query: 269 NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQ 328 A D R A + A V H+R + + + T + LMF+P E + Sbjct: 219 AAGSDAERLQAGRAFAADVLRHVRDIAER---YIIADETAESALMFLPAEAVYAELHANY 275 Query: 329 PELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDD 388 P+++ +A + + +VSPTTL+ L T+ + + + A I L D + D Sbjct: 276 PQVVEQAFRRRVWIVSPTTLMATLNTVRAILKDARMNDMAVLIRREVRALIDDVNRLDDR 335 Query: 389 MSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL--GVEIKREINPDLAE 441 + + + + ++ RQ ++ + + + G + + P E Sbjct: 336 VGKLARHFGQTGEDLRQIQISTE----KIMRRGDRIEEVQFGQDEPESLPPPTGE 386 >UniRef50_A4E9V7 Putative uncharacterized protein n=2 Tax=Collinsella RepID=A4E9V7_9ACTN Length = 451 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 64/434 (14%), Positives = 155/434 (35%), Gaps = 25/434 (5%) Query: 25 YQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSL-QSINTSLEADL 83 + AE LA E+ L A + ++ ++ Q ++ + Sbjct: 34 RERGDSSAETLAALEQANNALDALNVALAETRRTANAIAQQQTTDAAVGQQRYLTIAREF 93 Query: 84 REVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLS 143 + RM+ ++ ++ + ++ + + + N L+ + + Sbjct: 94 SQAGDRMDDLRRETAQQLGANREGIEHRLDKVRE----TVDAQLGAIRKDNNVQLDQMRA 149 Query: 144 PLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 + E+L ++ SF + + + + + ++Q +A +L R L G+ K + Sbjct: 150 TVDEKLSRTLNDRLSASFKQVSDQLEAVYKGLGDMQS----IATGVGDLKRVL-GNVKAR 204 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP----QGKDVVIDAK 258 G GEV L +L + +Y V+ + + + + V+LP + ID+K Sbjct: 205 GILGEVQLGAILADILTPD--QYLENVATKP--GASERVEFAVKLPVDEGDPVLLPIDSK 260 Query: 259 MTLVAYERYFNAEDDYTRE---SALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFI 315 AYE +A++ E +A + V+ + K L T ++ +MF+ Sbjct: 261 FPGDAYEHLLDAQESGDAETVAAARKTLDTMVKREANDICEK---YLSVPATTNFGIMFV 317 Query: 316 PVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRA 375 P E + + R + T ++ + P+T+ L ++ ++ + + Sbjct: 318 PFEGLYAEVVSRPGLIETLGRDYHVNVAGPSTMAAILNSLQMSYQTFKLQKRTDDVLRVL 377 Query: 376 SKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREI 435 S + ++ + + Q ++ A + ++ L +A + Sbjct: 378 SAVKAELPRYQKALRRAQQQIETAGKTVEGIITTRTNVMERKLKDIDALEDAEEADEILG 437 Query: 436 NPDLAEQAVSQDEE 449 + A +DE+ Sbjct: 438 LTSASLLADQKDED 451 >UniRef50_B2SC22 Basic helix-loop-helix dimerization domain bHLH n=63 Tax=Alphaproteobacteria RepID=B2SC22_BRUA1 Length = 407 Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats. Identities = 68/373 (18%), Positives = 150/373 (40%), Gaps = 20/373 (5%) Query: 87 TTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLR 146 + E + A+ ++ +++ ++ + + + +A +F +++ R+ L+ + + Sbjct: 54 EAQAEDRARDAEYRMAEILKAQAEMQGRMQTMA-EVFGSRQAELNQSIRERLDGMTHRIG 112 Query: 147 EQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWG 206 + + R ++ K + I Q +A + + L L + +T+G +G Sbjct: 113 QTMTEQTRSTHENLAKLQERLAV----IDTAQNNIQSLAGQVVQLQAIL-ANKQTRGAFG 167 Query: 207 EVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYE 265 + + ++ GL +G YE Q ++ N +PD +VR+P +VIDAK L A+ Sbjct: 168 QSRMEAIIAD-GLPQGA-YEFQATLSNST----RPDCLVRMPNNAPSLVIDAKFPLEAWN 221 Query: 266 RYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLAL 325 E R++A+ + + HI+ + K L T D +F+P E F Sbjct: 222 AMRETEQPEARKAAVAQFRRDMEIHIKDVSDK---YLIPGETQDTAFLFVPSESIFADIH 278 Query: 326 DRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLF 385 + LI A + +++VSP+ L+++++ I + + A I +L + + Sbjct: 279 EHFEALIQRAHRARVVVVSPSLLMLSIQVIQAILKDARMREQAHVIQGEVIRLMEDVGRL 338 Query: 386 IDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVS 445 + + + +A + + V + L P + + Sbjct: 339 DERVRKLQTHFIQANKDIDDILVS----SSKVTKRGAKIEALEFGPPPAEEPSRPQARPA 394 Query: 446 QDEEYRLRSVPEQ 458 + + RLR V E Sbjct: 395 EPGQLRLRVVDED 407 >UniRef50_C6I000 Putative uncharacterized protein (Fragment) n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I000_9BACT Length = 419 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 98/272 (36%), Positives = 161/272 (59%) Query: 23 ASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD 82 + + + E E + + E R+ + +LQ+ +L AD Sbjct: 142 LQRKLLEVGDNLSRLQVEHAGESGTIRSLTKELEETRSRLLSEIQKKEALQASEATLRAD 201 Query: 83 LREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLL 142 + T ++ +++ ++K+ ++ + + LS QF+NLA I E +++ QN+++L SLL Sbjct: 202 FLSLQTLLDESKKSYEEKMALLVEARETLSAQFKNLATEILEEKSQKFSLQNQEALKSLL 261 Query: 143 SPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQ 202 P+R +L F+ +V++ + KE ++R L ++ L +LN ++ EA NLTRALKG KTQ Sbjct: 262 DPVRLKLGEFQSKVEEVYVKEGKDRSALHAQVNQLMELNRTLSDEAQNLTRALKGSGKTQ 321 Query: 203 GNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLV 262 GNWGE++L +LE SGLR+G +YETQ S + SR QPDV++ LP+G+ +VID+K++L Sbjct: 322 GNWGELLLNNILEGSGLRKGSDYETQESHTREDGSRAQPDVVIHLPEGRHLVIDSKVSLN 381 Query: 263 AYERYFNAEDDYTRESALQEHIASVRNHIRLL 294 AY Y A ++ R++AL+ HI SVR HI L Sbjct: 382 AYVEYVGATEEAERQAALKRHIDSVRRHILDL 413 >UniRef50_A8IQM2 RmuC family protein n=3 Tax=Rhizobiales RepID=A8IQM2_AZOC5 Length = 388 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 51/360 (14%), Positives = 128/360 (35%), Gaps = 20/360 (5%) Query: 78 SLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQS 137 L + A + +R + + + + + +A + + + Sbjct: 39 RLAGARGQEGDESAARSDLLEAGLRDLARHQSETAGRVQAMA-EVLAQRQSDMARAVSER 97 Query: 138 LNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKG 197 L+S L E + R +S A+ + ++L ++ + ++L L Sbjct: 98 LDSTSYRLGESFNTAARATHESLTTLAERLAMVERAEKSLSD----LSSQVMSLRETL-A 152 Query: 198 DNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVID 256 + + +G +G+ + ++ + Q ++ N +PD ++ LP + +V+D Sbjct: 153 NKQARGAFGQARMEAIVSD--GLPRDSFAFQYTLSNG----RRPDCVIFLPGDPRPLVVD 206 Query: 257 AKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIP 316 AK L A + A+ R++A + H+ + + L T D ++F+P Sbjct: 207 AKFPLEAVTAFREAQSAEARKAAGNRLAQDMMKHVNDVAER---YLLPGETQDVAIIFVP 263 Query: 317 VEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRAS 376 E + +I A + ++LVSP+ L++A++ + + + A I Sbjct: 264 SESVHAELHEHFDAVIQRAYRARVILVSPSLLMLAIQVVQAIAKDARMREQADAIRREVG 323 Query: 377 KLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREIN 436 L + + + + + + D+ + + + + L + Sbjct: 324 LLVEDVARLRERVGDLSKHFALVGDDVSRVLVSAD----KIARRGLRLEQLDFTPAPPPS 379 >UniRef50_C7JFP3 DNA recombinase RmuC n=8 Tax=Acetobacter pasteurianus RepID=C7JFP3_ACEP3 Length = 422 Score = 186 bits (471), Expect = 2e-45, Method: Composition-based stats. Identities = 80/412 (19%), Positives = 153/412 (37%), Gaps = 45/412 (10%) Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLAN 120 E E N+ +E + R + R+E + +++ + R + Sbjct: 45 EREAATARSDIAAQRNSMVEME-RAMGGRIERMRTELAEQLGALAGGLGREQAEARAAQA 103 Query: 121 RIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 R + + + Q L S+ + EQL +Q+Q SF + ++ + + ++ Sbjct: 104 EAL----RNLADTSAQQLASIRRAVTEQLHEAVEQQMQTSFQRVLEQFSAMQKAMGEVRA 159 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 + Q+ +L R L + KT+G WGE L +L+ YE+ V I N Sbjct: 160 MTGQI----GDLKR-LFSNVKTRGGWGEAQLRAILDDV--LPPGTYESNVRIGNGND--- 209 Query: 240 QPDVIVRLP----QGKDVVIDAKMTLVAYERYFNAEDDYT---RESALQEHIASVRNHIR 292 + +R+P + +D+K AYER NA D+ ++A + ++R R Sbjct: 210 VVEFAIRMPVKSSTPPLLPVDSKFPTEAYERLLNAADEGDTAGEKAARKSLENTMRLEAR 269 Query: 293 LLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE-ALKNNIMLVSPTTLLVA 351 + K + +T+++ ++++P + + R P LI + + +M++ P + Sbjct: 270 KISSK---YIHPPKTVEFAVLYLPTDGLYTEV-ARMPGLIDDLGRQFRVMVMGPALMPAM 325 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 LRTI + + IA + +M + LDK N + + Sbjct: 326 LRTIHLGYVTLALEERTETIARL-------LGATRQEMIKMDGVLDKLARNAQAMSFSIE 378 Query: 412 SGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEA 463 R + + R L D E S EE + N A Sbjct: 379 EARRRTRSVSRKLREL----------DEPEDNASGTEESEIEFTGVDSNGTA 420 >UniRef50_D2BLP2 Endonuclease, RmuC family n=4 Tax=Lactococcus lactis RepID=D2BLP2_LACLK Length = 434 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 62/421 (14%), Positives = 155/421 (36%), Gaps = 25/421 (5%) Query: 17 AIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQ-SEHWRAECELLNNEVRSLQS- 74 ++ F + + + S QQ+ Q + + +NN+ +L Sbjct: 16 SLANFFKKTDKGNTSHQLSYLNQNLSEMRSDINQQLAQNRQELSSSLRSVNNDFSALTEN 75 Query: 75 INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQN 134 IN+ + +++ E + + + + + F+H + + + N Sbjct: 76 INSKFDWQFKDLQNSNEQKLEKISVSLVESTDRTVSKLSELTESITAKFDHKFKELQDSN 135 Query: 135 RQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTR 193 + L+ + + E+L R++ SF + + + ++ +A + +L + Sbjct: 136 DKRLSQIQETVDEKLQETLNRRISQSFEQVTLHLKNVEEGLGEMR----NLASDVDSLQK 191 Query: 194 ALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD- 252 + G KT+G GE+ L R+LE + +Y QV+I+ D + LP D Sbjct: 192 VMTG-VKTRGIVGEIQLGRILEQ--MFTSSQYREQVNIQGGNA----VDYALILPGKSDD 244 Query: 253 ----VVIDAKMTLVAYER---YFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGL 305 + ID+K + Y+R + D + + +V+ + + K + Sbjct: 245 SELLLPIDSKFPMEDYQRLQMALESNDSLEIDKTRKALFNAVKAQAKSISEK---YIVPP 301 Query: 306 RTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQS 365 +T D+ +MF+P E F+ ++ + + + PTT+ L ++ ++ Sbjct: 302 KTTDFAIMFLPTEGLFMEVVNNPELYEQISRDYKVNVTGPTTMTAVLNSLQMGFKTLQIE 361 Query: 366 RNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFR 425 + + ++ + + + F + + + L +++ + ++ L Sbjct: 362 QKSAEVYELLGAVKTEFGKFEGSLKKVQERLQQSEKEISNLITTRTNVMNRKLRNINEID 421 Query: 426 G 426 Sbjct: 422 N 422 >UniRef50_A8RDH1 Putative uncharacterized protein n=1 Tax=Eubacterium dolichum DSM 3991 RepID=A8RDH1_9FIRM Length = 369 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 64/360 (17%), Positives = 141/360 (39%), Gaps = 18/360 (5%) Query: 77 TSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQ 136 T + + +++ + + + Q QF+ + ++E Q Sbjct: 23 TKSNKQNGNMKEMLLESEKRQQEALFETQQKLQEAIVQFQTTMTNSVKQDLAHLNETTTQ 82 Query: 137 SLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALK 196 L ++ + E L + F + + L +L++L+ + +++ Sbjct: 83 HLYTIQKGVNENLSVGYDKTSKVFSQVLERMGKLDESQNSLKELSMSITH-----LQSIL 137 Query: 197 GDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVI 255 D KT+G +GE+ L +LE + + Y Q + N + + D ++ + + + I Sbjct: 138 TDKKTRGIFGEIELYSLLETAMGTDEKRYAKQYKLSNGSIA----DAVLFASEPLRMIAI 193 Query: 256 DAKMTLVAYERYFNAE-DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMF 314 D+K L Y R + R+ ++ V+ HI+ + K + T ++ +F Sbjct: 194 DSKFPLENYNRIMQEDISKEERKRLQNAFVSDVKKHIKAIADK---YIIAHETAEFAYLF 250 Query: 315 IPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADR 374 +P E F L+ + + + LVSPTTL+ + I ++ ++ N QI D Sbjct: 251 LPAEAVFSYIHANCDALVQYSYEQKVYLVSPTTLMAYITAIKAIYLGVQRNENVAQIQDA 310 Query: 375 ASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 +L + F ++ +K + MK +S +L + + + ++ K+E Sbjct: 311 LKRLQVEFDRFEKRYQSVSNDFEKVYQD----MKLVSITANKLLTRFKEIEAVELDKKKE 366 >UniRef50_UPI000196CD6C hypothetical protein CATMIT_02803 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196CD6C Length = 302 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 109/279 (39%), Gaps = 25/279 (8%) Query: 153 RRQVQDSFGKEAQERHTLTHE----IRNLQQLNAQMAQEAINLT---------RALKGDN 199 + ++ + + +L + I L + N + Q + + + + Sbjct: 24 QMKIHEKMIQTEAAHSSLDGQYNSIISLLNETNRSLGQSDVKINHMVDGMHEINVIMTNT 83 Query: 200 KTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAK 258 K +G +GE L +L + YE Q + N D + LP K ++ID+K Sbjct: 84 KKRGTFGEYQLYHILSLYCGDNQHIYEEQYHLSNGKIG----DAALHLPGNTKVLIIDSK 139 Query: 259 MTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVE 318 + Y + D+ S E +V+ HI + K TL+ +MFIP E Sbjct: 140 FPMENYLKIV---DNPKDISYQNEFKKNVKKHIDDISNK----YITEETLEEAVMFIPSE 192 Query: 319 PAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKL 378 +L D +L A +++ SP+TL+ + T+ N+ + ++S N ++I + KL Sbjct: 193 AIYLYLCDECADLYDYAHNKKVLMTSPSTLMGVVFTLINITKDFNRSENIKEIEKQIIKL 252 Query: 379 YDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNV 417 D + ++L+ + + ++ + Sbjct: 253 KSDTDRLDDRYGKVMKNLNTLEKSLKELEISKDKISKTI 291 >UniRef50_D1AYA9 Putative uncharacterized protein n=1 Tax=Streptobacillus moniliformis DSM 12112 RepID=D1AYA9_STRM9 Length = 359 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 64/335 (19%), Positives = 134/335 (40%), Gaps = 23/335 (6%) Query: 100 KIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSL---NSLLSPLREQLDGFRRQV 156 K + ++ E+++ I+E E N L ++ + D + Sbjct: 36 KFEILEKLMEKNERSKEDISKLIYEGKINVTSEINDFKLNMKENITKDVLNLGDKVENVL 95 Query: 157 QDSFGKEAQERHTLTHE---IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRV 213 +D F + +T+ + I Q+ +++ E I+L + L D K++G++GE L +V Sbjct: 96 KDGFKISNEAVNTVINRLVKIDETQKNIEKLSTEVISLQKIL-SDKKSRGSFGETRLEQV 154 Query: 214 LEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQG-KDVVIDAKMTLVAYERYFNAED 272 L YE Q N + D ++ L V ID+K L Y Y ++ Sbjct: 155 LGYVYGDNNNLYERQYKFSNGKVA----DAVLFLNTKLNKVAIDSKFPLENYILYSENKN 210 Query: 273 DYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELI 332 R +E I ++ HI + K + T++ +MF+P E F+ PE++ Sbjct: 211 VEYR----KEFIKDLKKHIDDISSK---YIIIGETINQAIMFLPSESIFIDIYSEFPEIL 263 Query: 333 TEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI 392 A + + S T L++ + T+ ++ NA++I ++ + + + D + Sbjct: 264 EYAYSKRVWIASQTNLMIYITTMQFSTIEYKRNENAKEILNQLDRFSKEFLRYNDRWQNL 323 Query: 393 GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 + + + ++ L+ + + E + L Sbjct: 324 NKDFKRLEKDFND----LNITSDKIAKEFEKIKNL 354 >UniRef50_D2RMS8 Putative uncharacterized protein n=2 Tax=Acidaminococcus RepID=D2RMS8_ACIFE Length = 327 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 62/315 (19%), Positives = 124/315 (39%), Gaps = 28/315 (8%) Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQ 179 + +Q R+ + L + L +++ V D + ++ Sbjct: 24 QKSLGAQEEIRAQQAREEADRLRNSLDQKVTLSMSVVSDRLAMVNRGLGSM--------- 74 Query: 180 LNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRM 239 +AQ +L + L + K +G WGE+ L +L + +Y T V+I RS+ Sbjct: 75 --QSLAQGVGDLKKVLT-NVKNRGIWGEMQLGNLLGD--MLAPEQYGTNVAIRP--RSQE 127 Query: 240 QPDVIVRLPQ-----GKDVVIDAKMTLVAYERYFNAEDDYTRES---ALQEHIASVRNHI 291 + + +RLP + IDAK L Y+R A +D + AL++ +++ Sbjct: 128 RVEFAIRLPGRTGDAPVWLPIDAKFPLEDYQRLVQAREDGDADGETLALKQLEIRLKSEA 187 Query: 292 RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVA 351 + + K + + D+ L+++P+E F A+ R + K + LV PTTL Sbjct: 188 KDIRDK---YIAPPYSTDFGLLYLPLEGLFAEAVSRPGLVSELQRKYRVTLVGPTTLAAV 244 Query: 352 LRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLS 411 + ++ +R + Q+ +++ + F + + L +AQ + + Sbjct: 245 VNSLQMGFRTLVIQKQTSQVWRLVAQINTDLGAFQTAVERAEKKLAEAQSAMES-VGDRT 303 Query: 412 SGRGNVLAQAEAFRG 426 L +AE F Sbjct: 304 RILKKHLDRAEKFTK 318 >UniRef50_C8PDX5 RmuC domain protein n=1 Tax=Campylobacter gracilis RM3268 RepID=C8PDX5_9PROT Length = 356 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 68/341 (19%), Positives = 127/341 (37%), Gaps = 18/341 (5%) Query: 93 AQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGF 152 + D + A+ N+ +++ L L L E L Sbjct: 28 QNRRISDANSALSELLSERLTAQSARASAELFKLNQSLNDGFNDKLYYLNRSLGEGLQRQ 87 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNA---QMAQEAINLTRALKGDNKTQGNWGEVV 209 + ++ + + + + + N Q+ E L L G+ K +GN+GE Sbjct: 88 NSALSENLSSLDRGFKDIAENLARMSEQNKTSLQVRDEIARLNSIL-GNVKLRGNFGEYR 146 Query: 210 LTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFN 269 L R+L + YE Q + N D + + + K + ID+K L +YE+ Sbjct: 147 LERILSMIYGQNAAFYELQKHLPNG----RIADCALHIAKEKILCIDSKFPLQSYEKIIA 202 Query: 270 AE---DDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALD 326 D SA ++ A ++ H + K + + ++ ++F+P E F+ + Sbjct: 203 TSASNDAAALASADKQLAADMKKHAADIAEK---YIIPPLSTEFAVLFVPSEAVFVYVCE 259 Query: 327 RQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 R P+++ + I SPTTLL L TI + E ++N + + D L Sbjct: 260 RLPQVLEYCAQIGIFAASPTTLLALLGTIRTFIKDEVLAQNIKSVKDEIYALKSDF---- 315 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGL 427 D + +L D + L+ ++ A+ E F L Sbjct: 316 DAHAKYATALQTYADKLAAQAELLNKNAKSLKARFERFSEL 356 >UniRef50_C3RQV3 Putative uncharacterized protein n=1 Tax=Mollicutes bacterium D7 RepID=C3RQV3_9MOLU Length = 339 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 47/243 (19%), Positives = 107/243 (44%), Gaps = 10/243 (4%) Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 ++ + Q L + + K++GNWGE L +L +ETQ S++N Sbjct: 93 KEQTNNITQRINAL-NDIMVNKKSRGNWGEYQLNNLLSVYAGDNQSIFETQYSLKNGYIG 151 Query: 238 RMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAED-DYTRESALQEHIASVRNHIRLLGR 296 DV +++P K ++ID+K L + + + E + + ++ HI + + Sbjct: 152 ----DVALKIPGEKVLIIDSKFPLENFRKLDSVESAENDIKKFESAFKQDIKKHINDISK 207 Query: 297 KDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIA 356 K T++ +MFIP E ++ + ELI A +++L PTTL+ + T+ Sbjct: 208 K----YITSETIENAVMFIPSEAIYMEVCAKYSELIEYAHHKHVLLTCPTTLIGVVFTLI 263 Query: 357 NLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGN 416 N+ + +++++ + + +Y+ + + + + +++K Y++ + Sbjct: 264 NITKDFNRNKHIKSLEKEIVAMYNDSQRMMTRLEGLSNTIEKLDKCYKEVFTSCNKIDSK 323 Query: 417 VLA 419 + Sbjct: 324 IKK 326 >UniRef50_Q5FTW7 DNA recombination protein RmuC-like protein n=1 Tax=Gluconobacter oxydans RepID=Q5FTW7_GLUOX Length = 410 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 57/357 (15%), Positives = 133/357 (37%), Gaps = 26/357 (7%) Query: 59 RAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENL 118 R + ++ L R ++ R++ + +++ + + + + L Sbjct: 40 RLLEREAQERSQDVEYHRAHLSEVERVLSGRLDQFRLETSERLSTLARNLGQDQAEGRFL 99 Query: 119 ANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIRNL 177 + + +EQ + + + + EQL G +Q+Q SF + ++ + + + Sbjct: 100 LSDALREMAQSQNEQ----IERIRATVNEQLHGAVEKQMQTSFQRVVEQFSAMQKALGEV 155 Query: 178 QQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARS 237 + AQ+ + L + KT+G WGE +L+ L EG Y+T + + Sbjct: 156 TSVTAQIGD-----LKRLFSNVKTRGGWGEAQCRAILDDI-LPEGS-YDTNFRLGTAGEN 208 Query: 238 RMQPDVIVRLP-----QGKDVVIDAKMTLVAYERYFNAEDDYT---RESALQEHIASVRN 289 + V++P + ID+K AYER NA + A +E +R+ Sbjct: 209 ---VEFAVKMPVRGTETPPRLAIDSKFPTEAYERLLNASEAGDALAERQARRELENVIRS 265 Query: 290 HIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLL 349 + + K + T+++ ++++P + + + +M++ P+ L Sbjct: 266 EAKKIASK---YILPPVTVEFAVLYLPTDGLYAEIARMPGVIDEIGRLYRVMVMGPSLLP 322 Query: 350 VALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 LRT+ + + IA +M + + ++ + +A Sbjct: 323 AMLRTVHLGYVTLTLEERTEAIAGLLGATRQEMLRMDQVLEKLHRNAGTMGNTIEEA 379 >UniRef50_B0KVA7 Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT Length = 366 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 61/327 (18%), Positives = 124/327 (37%), Gaps = 15/327 (4%) Query: 125 HSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQM 184 R + R ++ + RE L + + + K + + ++ +Q+ + Sbjct: 55 EVMERQLKDQRMTIEEQMKNHRETLSQQTKFISERLEKSSDVIREVQKQLGGIQEFGTDI 114 Query: 185 AQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVI 244 +L+ LK K +G GE L +LE Y+TQ ++ + D + Sbjct: 115 K----DLSNILKS-PKLRGGLGEQFLYEILENF--LPKDLYKTQYKFKDGSIC----DAV 163 Query: 245 VRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPG 304 + + ID+K + ++ AE R+ + I+ V+ I + K LP Sbjct: 164 IFT-DRGIIPIDSKFPMENFKAMITAETQPERDKYKKMFISDVKKRIEEISSKYI--LPE 220 Query: 305 LRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQ 364 +T D +M++P E + + PE+ A NI++ SP TL L+ + ++ Sbjct: 221 EKTTDQAIMYVPSENVYYELIVNTPEIEDFAKNKNIVMASPNTLSYFLKVLLVAYQQHEL 280 Query: 365 SRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 ++ +I + + + F D++ + + + + + S G + A Sbjct: 281 QKHTGEILKALAGIRVEANKFNADLNVLERHISNSYKTMDSVKSRYSRLLGRIEKT-HAI 339 Query: 425 RGLGVEIKREINPDLAEQAVSQDEEYR 451 G E + D E A Q+E Sbjct: 340 EKSGEEAIEKPEEDSNENAQEQNELLE 366 >UniRef50_Q0BQ35 RmuC family protein n=3 Tax=Acetobacteraceae RepID=Q0BQ35_GRABC Length = 429 Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats. Identities = 79/413 (19%), Positives = 156/413 (37%), Gaps = 30/413 (7%) Query: 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEAD-LREVTTRMEAA 93 L R E S A+ + R ++ +L+ NT EV T A Sbjct: 24 LPSRLAAAMEQSDARGRDETEAMRRHLLDMERALSAALREANTEAMGRIFSEVGTATGAL 83 Query: 94 QQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-F 152 +Q + + +++ R R+ E + L + + + EQL Sbjct: 84 RQDVTGSLGALRDAQGRAIGDLHT----ALREGLDRLRESSEARLAEIRTAVNEQLHAAV 139 Query: 153 RRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTR 212 +Q+ +SF + + + + ++Q + AQ+ + L + KT+G WGE + Sbjct: 140 EKQMTESFARVIDQFTAVQKAMSDVQAVTAQIGD-----IKRLFSNVKTRGGWGEAQVRA 194 Query: 213 VLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKD--VVIDAKMTLVAYERYFNA 270 +L+ YET + +D+ ++ VI+ + + + IDAK + YER A Sbjct: 195 MLDDV--LPPGSYETNKRLRDDSDEVVEFAVIMPMKGDRPVYLPIDAKFPVEDYERLLAA 252 Query: 271 EDDYTRES---ALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDR 327 + E+ A+ +++ R + K + RT+++ ++++P + + R Sbjct: 253 SEAGDVEAERMAVAGLTRRIKDEARKIATK---YVLPPRTVEFAVLYVPTDALYAEI-AR 308 Query: 328 QPELITEALK-NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFI 386 P LI E + + ++++ P+ LRTI + A QI + Sbjct: 309 VPGLIDEVGRLHRVLVLGPSVFPALLRTIHLGHVTLALEQKADQIRTL-------LGATK 361 Query: 387 DDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDL 439 +M + + L++ + S R A A RG+ E L Sbjct: 362 TEMERMDKVLERLAKQAGTFSNTIESARVRTRAVARTLRGVEGREPEEAERLL 414 >UniRef50_B7CC51 Putative uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CC51_9FIRM Length = 273 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 59/296 (19%), Positives = 121/296 (40%), Gaps = 28/296 (9%) Query: 130 VDEQNRQSLNSLLSPL--REQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQE 187 + ++++S++S L ++ + +QVQD +A + +L L ++N M Sbjct: 1 MQNKSKESVSSNSDSLILQKNFEYLLKQVQDVQKNQATSKMSLNQMEDYLYRMNQVMT-- 58 Query: 188 AINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRL 247 + K +GNWGE L +L + Y Q ++ N + D L Sbjct: 59 ----------NTKLRGNWGEYQLDMLLSVYCGQNPSIYSMQYTLPNGKIA----DCAFHL 104 Query: 248 PQ-GKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLR 306 P K + ID+K + Y ++ L+ +++ HI + K Y + Sbjct: 105 PDTNKVLCIDSKFPMENYLNLQE-----DMDTYLRPFKMNMKKHIDDVANK-YIN---MD 155 Query: 307 TLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 T+ Y L+F+P E + + +L T AL+ ++MLVSPTTL+ + T+ + + +++ Sbjct: 156 TMPYALLFVPSEAIYQFVCAKCDDLFTYALQKHVMLVSPTTLVAEVMTLLSSTKDFYRTS 215 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAE 422 + ++I L + ++ ++L+ + + E Sbjct: 216 HMEEIERNILLLQEDANRLVERSVKAEKTLETLATQFHAVSISAQKLSSRMTKMGE 271 >UniRef50_A5FY08 Putative uncharacterized protein n=1 Tax=Acidiphilium cryptum JF-5 RepID=A5FY08_ACICJ Length = 451 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 77/443 (17%), Positives = 160/443 (36%), Gaps = 30/443 (6%) Query: 14 VGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQ 73 + G + + ++A + A+ SE L + Q Sbjct: 29 IAALRGEIAEQSRAGLREAFDRVQDGARAQGEQLARLHGAMSELSILLTGKLAEAESAAQ 88 Query: 74 SINTSLEADLREVTTRMEAAQQHADDKI-RQMINSEQRLSEQFENLANRIFEHSNRRVDE 132 + ++ R+ +Q D++ R + L E E L R+ E + Sbjct: 89 AGRAQGLSETMAAIARLTESQTLLADRMNRDLAGVSLALREGQEALRGRV-EQKLDEIRT 147 Query: 133 QNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINL 191 N L+++ + + E+L +++ +SF + A++ + I +Q +A + +L Sbjct: 148 GNEAKLDAMRAAVDEKLQSALEQKIGESFQRVAEQFAQVQQAIGQVQS----VATQVGDL 203 Query: 192 TRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP--- 248 R L + K++G WGE + + L+ + + + D + +R+P Sbjct: 204 KR-LFANVKSRGGWGEAQIRQTLDDTLPPG----TFEANFRADPNGAEAVEFALRMPVRE 258 Query: 249 --QGKDVVIDAKMTLVAYERYF---NAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLP 303 Q + IDAK Y+R A D AL+ +R+ + + +K Y + P Sbjct: 259 GDQPVWLPIDAKFPTEDYDRLLLAAEAGDRDGETQALRALSTRIRDEAKKIAQK-YIRPP 317 Query: 304 GLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEH 363 RT D ++++P E F + ++ +++ SP+ L L TI Sbjct: 318 --RTTDIAILYLPSEGLFAEVARIPGLVEQVQREHRVLIQSPSLLPALLHTIRVG----- 370 Query: 364 QSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEA 423 Q+ RA ++ + + +G+S++ Q K + S + + A Sbjct: 371 --HFTVQLERRAGEIGRILSAVKLEWGKLGESIEALAKRAEQLSKGIDSTQVRIRAVGRK 428 Query: 424 FRGLGVEIKREINPDLAEQAVSQ 446 R + + L + Sbjct: 429 LRDIDELDPTQAPALLGLDTAEE 451 >UniRef50_B3PMT9 RmuC domain protein n=1 Tax=Mycoplasma arthritidis 158L3-1 RepID=B3PMT9_MYCA5 Length = 453 Score = 170 bits (431), Expect = 9e-41, Method: Composition-based stats. Identities = 71/442 (16%), Positives = 175/442 (39%), Gaps = 36/442 (8%) Query: 1 MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRA 60 M ++++ IAL+G+ + Y + + + EE+ ++ + ++ Sbjct: 1 MLIALIILTTIALLGIIATIIVQLYFQKKALNKPQIKNEEIAEQIKNQLKPELETIKRDM 60 Query: 61 ECELLNNEVRSLQSINTSLEADLREVTTR-MEAAQQHADDKIRQMINSEQRLSEQFENLA 119 + + VR L +E+ L ++ R +E Q++ + ++ S + ++ +F++L Sbjct: 61 SDSIKEDLVRKLNENKELVESKLNFLSQRFLEINQKNISNLNEELKKSPEAINVKFDDLR 120 Query: 120 NRIFEHSNRRVDEQNRQSLNSLLSPLREQLD-GFRRQVQDSFGKEAQERHTLTHEIRNLQ 178 + + + E + + + + E + ++++ F E L + + + Sbjct: 121 TN-LDRKLKDLSEATDRQVAKIKEEINEHFKSKVQEKLEEQFKDIQDEMLKLRTSVTDFK 179 Query: 179 QLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVS-------- 230 + + L + + ++K +GN+GE+ L +L+ ++ + + Sbjct: 180 T----LQTDVQELNK-IFTNSKLRGNYGEMNLETLLKDMFTQDNWAKNVNIKKLSADEDS 234 Query: 231 --------IENDARSRMQPDVIVRLPQG---KDVVIDAKMTLVAYERYFNAEDDYTRESA 279 E+D + D +V+ + K + ID K L Y RY D Sbjct: 235 LKNATIDPTEDDINYKTMVDFVVKHYENNELKYIPIDCKFPLEDYNRYLETGD----LKY 290 Query: 280 LQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQP--ELITEALK 337 ++ I+ V+ + + K Y P T +Y +M+IP E +D Q ++I + Sbjct: 291 KKDLISRVKKMAKDIATK-YINPP--ITTNYAVMYIPSESILAELIDGQDGFDVILNLEE 347 Query: 338 NNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLD 397 I+ + P + + L + + ++N+++I K + ++++ S + Sbjct: 348 KKILCLGPLQINLFLSNLRYNTKQYQMNKNSEKILALFEKTRKIFKSTLENLEKTKNSSN 407 Query: 398 KAQDNYRQAMKKLSSGRGNVLA 419 K +N + ++ L N L Sbjct: 408 KITENIEKTLRDLGKINNNFLV 429 >UniRef50_C7GZ78 Competence-induced protein Ccs50 n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZ78_9FIRM Length = 340 Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats. Identities = 53/319 (16%), Positives = 121/319 (37%), Gaps = 16/319 (5%) Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 + N+ N + + R +L ++ L+ + + + T Sbjct: 31 EMTNIQNETIFRVKEELQNEARLGSKQMLDERKQVLEVVNKANLMMQKESERISTQFTDV 90 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 + + ++ +A E +L + L + K +G GE L +L +Y+ V+I+ Sbjct: 91 QKGIGEM-KGLAGEVGSLKKIL-SNVKRRGILGETQLENILSDVLSP--SQYKKDVAIKE 146 Query: 234 DARSRMQPDVIVRLPQGKD---VVIDAKMTLVAYERYFNAE---DDYTRESALQEHIASV 287 ++R + + LP + + ID+K YE+ NA D + + + ++ Sbjct: 147 NSREN--VEFAIVLPGKDEEVLIAIDSKFPAEMYEQLLNAYSGGDKNEIKMHQDKFVKAL 204 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 +N + + K Y P T D+ +MF+P E + A+ + +I++ P T Sbjct: 205 KNEGKSISGK-YINPP--VTTDFAMMFLPFEGLYQEAITLGAA-EMLQKEYSIVVAGPIT 260 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 + L + ++ R + ++ +++ + F + +S + LD A + + Sbjct: 261 MFAILNSFLIGFKTLEVDRKSSEVWRALNEVKTEFSKFDEALSKTAKHLDTATKSLNELR 320 Query: 408 KKLSSGRGNVLAQAEAFRG 426 ++ L E Sbjct: 321 TTRTNQLARKLDAIEEVDD 339 >UniRef50_A4GHX6 Putative uncharacterized protein n=1 Tax=uncultured marine bacterium EB0_39H12 RepID=A4GHX6_9BACT Length = 294 Score = 169 bits (427), Expect = 2e-40, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 95/274 (34%), Gaps = 11/274 (4%) Query: 157 QDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEA 216 D T I L + + L R L G G +GE L +++ Sbjct: 31 DDFLKGIDHSIETQRTTIGELSKDIQSFNEPLTKLNRYLSGGT-LAGKFGEWSLESIIKD 89 Query: 217 SGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR 276 +YE+ + + + + ++LP+G + IDAK ++ + NA + Sbjct: 90 IFHPN--QYESNAEVIPGSGK--RVEFTIKLPEGLVLPIDAKFPSALFDNFINASESGD- 144 Query: 277 ESALQEHIASVRNHI-RLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEA 335 E +++ +R H+ + + + T+D +M+IP E + Sbjct: 145 ERLVKKTRDDIRRHVLKDASDIKEKYVQSGITVDLGVMYIPSESLMQTIDSLDNIRESIF 204 Query: 336 LKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQS 395 I+++ P +L L ++ +R + A +I KL + F + + Sbjct: 205 RDYRILIMGPNSLAAYLISVHMGFRTLALNERAGEIMSEFGKLKKEFEKFGGSTEDLMKK 264 Query: 396 LDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGV 429 +D Q + + ++ + L Sbjct: 265 VDALQKSVNE----YTTRERQMERAINNMDKLDS 294 >UniRef50_Q1RJ81 DNA recombination protein rmuC homolog n=15 Tax=Rickettsia RepID=RMUC_RICBR Length = 428 Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats. Identities = 75/413 (18%), Positives = 162/413 (39%), Gaps = 26/413 (6%) Query: 54 QSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSE 113 + + E + L ++ + + N L + ++E + + + + + +SE+ +E Sbjct: 25 KVRTLKTELQFLTDQNLEITNNNQLLNQEKIAYLQKIEQLKCRVEYQEQSIKDSEKIRNE 84 Query: 114 QFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHE 173 F + A + + +Q + ++ + + +L + + + GK E L Sbjct: 85 SFSS-AKAALFDLGKDLSKQLIE-IHKMENTAARELA--EKNIATASGKFNSEFERLITM 140 Query: 174 IRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIEN 233 + L + Q + ++L G E+ L +L++SGLR ++ Q + Sbjct: 141 VGTLNKDIEQSKSTVDLIKQSLLSPIGA-GLLAEITLENILKSSGLRSNLDFIMQYGLTT 199 Query: 234 DARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRL 293 ++++PD ++ LP G +VID+K + + +D+ ++ H++ Sbjct: 200 SDSTKLRPDALIFLPSGNLMVIDSKASKF----LVDEQDNSG------NLSKTMNYHLKS 249 Query: 294 LGRKDYQQ--LPGLRTLDY------VLMFIPVEPAFLLALDRQPELITEALKNNIMLVSP 345 L KDY + L L + LMF+P E A + P + +A +I V P Sbjct: 250 LANKDYAENILADLNKKEQNYNNVITLMFLPTEQAVEKVIAADPNFLQKAWGCSIFPVGP 309 Query: 346 TTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQ 405 + L+ L +S N + I + KL + D IG +L NY + Sbjct: 310 SGLMNMLSFAKFQITDHRRSENYKIIIEEVRKLLSSIGTIADYSQKIGNNLHNMVTNYDK 369 Query: 406 AMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQ 458 + N +++ + + LG++ + P E+ + + V + Sbjct: 370 FAASFN---RNFMSRVKNIQKLGIDSGNKTLPASLERYQIVSSKSEIIEVEAE 419 >UniRef50_Q14LU5 Conserved hypothetical transmembrane protein n=1 Tax=Spiroplasma citri RepID=Q14LU5_SPICI Length = 387 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 62/358 (17%), Positives = 131/358 (36%), Gaps = 24/358 (6%) Query: 69 VRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNR 128 + +Q+ LE + ++ ++ I + + + +F I Sbjct: 41 QKDIQASKELLEKQGLGLQNQLSEQKRELLTLISEFQTNSVKNDAEFNRNLA-ILNEGLN 99 Query: 129 RVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEA 188 + +L+ + L+ L+ + SF L L+++ ++ Sbjct: 100 NF----KNNLSKQDTDLKNNLNHQGEIISKSFTDVLSNLKVLKESTTTLKEVETKVKT-- 153 Query: 189 INLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLP 248 + +NK +GN GE +L +VL +E Q + D +V+ Sbjct: 154 ---LNDIFLNNKKRGNLGEYLLEKVLSDMYGERHQGWERQYKLPTGT----VVDALVKTG 206 Query: 249 QGK-DVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRT 307 K ++ IDAK L Y +Y D + L +++ I + Y L + Sbjct: 207 GAKENIAIDAKFPLSNYNKYLEVSDTTIKNKYLNLFKQDLKDRINEVA--KYINLENEIS 264 Query: 308 LDYVLMFIPVEPAFLLALDRQPE-LITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSR 366 +MF+P E F + P+ +IT A K + + SPTTL L + R ++ Sbjct: 265 S--AIMFVPSEDLFAFIYGQFPDDIITFAFKKRVWVTSPTTLSAILFVLEKHMREVAFNQ 322 Query: 367 NAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAF 424 N + I K+ + +++ ++ K + ++++L++ + Q + Sbjct: 323 NIEAIKTNLLKIKGEFERWVERWQEFTKNFVK----FNTSIEQLNTTHNKIQIQYQKI 376 >UniRef50_D0JBI8 RmuC family protein n=2 Tax=Blattabacterium RepID=D0JBI8_BLASB Length = 351 Score = 166 bits (419), Expect = 2e-39, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 129/360 (35%), Gaps = 26/360 (7%) Query: 58 WRAECELLNNEVRSLQS-INTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFE 116 +R E + E++ L L L EV + + + D + + + + Sbjct: 3 FRKEFKDQKEEIQKLSQYSKKELNNSLVEVKNGLTQTVKDSQDSL----EKKIQFYFDHQ 58 Query: 117 NLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDG-FRRQVQDSFGKEAQERHTLTHEIR 175 + ++ + L + + E+L + SF + L + Sbjct: 59 SKKLDSVYKEQEKLIRIIEKKLEEIKENVNEKLQNSLNIHLGKSFEIIGNQLFFLQEGLG 118 Query: 176 NLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDA 235 ++ +A++ +L R L K G++ E+ L+ +L+ E +Y + V + + Sbjct: 119 EMKI----LAKDVSSLKRTLNH-VKICGSFSEMQLSMLLQQILSPE--QYASNVITK--S 169 Query: 236 RSRMQPDVIVRLPQGKD-----VVIDAKMTLVAYERYFNAEDDYTRES---ALQEHIASV 287 + + ++LP +D + ID K YE+ A +++ A++ + + Sbjct: 170 NTNFVVEFAIKLPGLEDGNIIWLPIDVKFPKETYEKVQTAYRKGEKKNIEIAIKNMESVL 229 Query: 288 RNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTT 347 + + + K + T D+ ++F+P E + L K ++ P+T Sbjct: 230 KKMSKDIKEK---YIDPPHTTDFAILFLPFEGIYAEIARNSGLLEELLRKYKTVITGPST 286 Query: 348 LLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAM 407 L L ++ +R + + ++ + + F + L A + + + Sbjct: 287 LAAVLNSLQIGFRTLAIQKRSSEVWKILETVKQEFTKFRFLLHQAQDKLQGASKDIDKLL 346 >UniRef50_Q2SRN1 Membrane protein, putative n=3 Tax=Mycoplasma mycoides group RepID=Q2SRN1_MYCCT Length = 358 Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats. Identities = 68/328 (20%), Positives = 135/328 (41%), Gaps = 13/328 (3%) Query: 111 LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTL 170 L+ +F+ I + + E + +LN+L + +Q + + + +E + + Sbjct: 40 LNNKFDTNKELITKE-IEKDTEITKTNLNNLEKTVNKQKEDLTKSLDKLEEN-IKEFNKI 97 Query: 171 THEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYE--YETQ 228 T+ I + + + Q L+ K ++KT+GN GE L +L + ++TQ Sbjct: 98 TNNINTIDKKVDKSVQNINELSLIFK-NSKTRGNLGEFTLEWILTNVLGEKTDNGIWQTQ 156 Query: 229 VSIENDARSRMQPDVIVRLP-QGKDVVIDAKMTLVAYERYF-NAEDDYTRESALQEHIAS 286 +N S + D I++ K + ID+K L D Y A E + Sbjct: 157 YKYKN---SNVIVDAIIKTQINDKKIAIDSKFPLTKANILISENTDSYLYRQAEGEFKQT 213 Query: 287 VRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPT 346 ++N I+ L K + + V+MFIP E F L + ++ +EA+KN I + SPT Sbjct: 214 IKNMIKELNNKYISNSENVSS---VIMFIPSEAIFELIWSKFTDIFSEAIKNKIWICSPT 270 Query: 347 TLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQA 406 TL L + + S+N +I + D ++ +D + + +K + + Sbjct: 271 TLPAVLYSQQISIKEYKISKNINEIQKLIKTITDDVKRLLDRNEKMSKIYEKYKTETEEV 330 Query: 407 MKKLSSGRGNVLAQAEAFRGLGVEIKRE 434 K+ + + + ++ +E Sbjct: 331 FKEFQTSANKIDKNYSKLESINIDDNQE 358 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.307 0.133 0.314 Lambda K H 0.267 0.0409 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,068,200,903 Number of Sequences: 3077464 Number of extensions: 86227407 Number of successful extensions: 541114 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 5974 Number of HSP's successfully gapped in prelim test: 16000 Number of HSP's that attempted gapping in prelim test: 481547 Number of HSP's gapped (non-prelim): 65852 length of query: 475 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 343 effective length of database: 634,171,108 effective search space: 217520690044 effective search space used: 217520690044 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 95 (41.2 bits)