10 c3cuxA_ Probab=100.00  E-value=0  Score=393.98  Aligned_columns=295  Identities=18%

Q ss_pred             CCCCCCCCCEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHH--HHHHHHHHHHHHH-------------CHHCCC
Q ss_conf             7544654433532569998999888626998999988688886668--9999999999961-------------101198
Q batch____         7 QQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLEDSVALREK--DTARRMVYHALQH-------------PLYRDI   71 (302)
Q Consensus         7 ~~~~~~~~RS~L~vPa~~~~~~~ka~~~gaD~vilDLED~V~~~~k--~~Ar~~l~~~l~~-------------~~~~~~   71 (302)
                      .+...+.||+.|.+|+ +++|+.|++.||||.|++||||||+|++|  ..||.|+.++++.             ...+..
T Consensus        72 ~p~~l~~Rr~eit~Pa-~~~m~~kAl~SgAD~v~lDLEDavaP~~k~~~~ar~nv~~Al~~~l~~~~~~~~~~ri~~~~~  150 (501)
T c3cuxA_          72 LPKDLEDRRVEITGPV-DRKMVINALNSGAHLFMADFEDSNSPTWENAIEGQINLRDAVKGTISHKNENGKEYRLNSKTA  150 (501)
T ss_dssp             CCGGGSCCSEEEEEES-CHHHHHHHHTSSCSEEEEESSTTSCCCHHHHHHHHHHHHHHHHTCCCEECTTSCEECCCSSCC
T ss_pred             CCHHHCCCEEEEECCC-CHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC
T ss_conf             9914307706895379-988998886179989999574788999787899999999984000112455662331267773


Q ss_pred             EEEEECCCCCCH--------------------HHHHHHHHHHHCC-CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             499951889897--------------------6788899998429-9899985669989999999999988985022578
Q batch____        72 ETIVRVNALDSE--------------------WGVNDLEAVVRGG-ADVVRLPKTDTAQDVLDIEKEILRIEKACGREPG  130 (302)
Q Consensus        72 ~~~VRin~~~s~--------------------~~~~Dl~~~~~~~-~dgIvlPKv~~~~~v~~~~~~l~~~e~~~g~~~~  130 (302)
                      .++||+|+++++                    ++..+...+...+ .+.|+|||+++++|++.+.+.|..+|..+|++.|
T Consensus       151 ~l~VR~ngl~l~~~h~~vdg~~~~g~l~D~~l~~~~~~~~l~~~g~~~~i~lPKves~~ev~~v~~ll~~~E~~~Gl~~g  230 (501)
T c3cuxA_         151 VLIVRPRGWHLEEKHMQVDGKNMSGSLVDFGLYFFHNAKALLEKGSGPYFYLPKMESYLEARLWNDVFVFAQKYIGIPNG  230 (501)
T ss_dssp             EEEEECCCTTCEEEEEEETTEEEEHHHHHHHHHHHHHHHHHHHTTCCCEEEECCCCSHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred             EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             38984587687311100034322100223456541211344203778647851579999999999999999998089987


Q ss_pred             CCEEEEEECCHHHHHHHHHHH-HCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHHH-----HHHCCCCEECCC
Q ss_conf             617999838989999799997-13788039997568999970988899844899999999999-----997799555065
Q batch____       131 STGLLAAIESPLGITRAVEIA-HASERLIGIALGAEDYVRNLRTERSPEGTELLFARCSILQA-----ARSAGIQAFDTV  204 (302)
Q Consensus       131 ~~~i~~~IET~~al~~~~~Ia-~~~~rv~~l~~G~~Dl~~~lG~~~~~~~~~l~~ar~~iv~a-----araaGi~aid~v  204 (302)
                      +++++++|||+.|+.|+++|+ .+++|+.+|.||..||++|+|.+.+..+..+.+.|++++.+     +.+..+..++++
T Consensus       231 tI~i~vlIETa~g~~n~~eIa~~~~~Rl~gL~fG~~Dy~aSlg~~~~~~~~~llpdr~~~~~~a~~~~a~~~~l~~i~~~  310 (501)
T c3cuxA_         231 TIKATVLLETIHASFEMDEILYELKDHSAGLNCGRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHR  310 (501)
T ss_dssp             CCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEECSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf             70699995360478539999973011102102085777676403246777442411332213338889999858987664


Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCC------------------------------CHHHHHHH
Q ss_conf             536899899999999997335777021277699999986099------------------------------98999999
Q batch____       205 YSDANNEAGFLQEAAHIKQLGFDGKSLINPRQIDLLHNLYAP------------------------------TQKEVDHA  254 (302)
Q Consensus       205 ~~~~~D~~gl~~~~~~~~~~Gf~Gk~~IHP~Qi~~vn~~f~p------------------------------s~~ei~~A  254 (302)
                      +..+.|.+++++++++++.+||+|||||||+||+++|++|.|                              |.++++++
T Consensus       311 ~g~~a~~dg~r~d~~ra~~lGfdGkwviHP~QV~~~n~vF~~~~~~p~q~~~~~~~~~~~~~dL~~~p~g~~T~~~vr~a  390 (501)
T c3cuxA_         311 RNAPAIGEKVRADKEREALDGHDGTWVAHPGLVPVAMEVFNHIMKTPNQIFRKREEIHVTEKDLLEVPVGTITEEGLRMN  390 (501)
T ss_dssp             TTCCEECCHHHHHHHHHHHHTCSBEEESSGGGHHHHHHHHHHHCCSSCCTTCCCTTCCCCHHHHHCCCCCCCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHH
T ss_conf             03346613568998867864998420138568799999976336784200123001222266630487755488999999


Q ss_pred             HHHHHHHHHHHHCCCCEEEECCEECCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             999999986421288558789998138999999999999997086579
Q batch____       255 RRVVEAAEAAAREGLGVVSLNGKMVDGPVIDRARLVLSRAELSGIREE  302 (302)
Q Consensus       255 ~~ii~a~~~a~~~g~g~~~~~g~Mid~p~~~~A~~il~~a~~~gv~~e  302 (302)
                      .+|+..|.+++..|.|++.++|+|+|.++++-+|..|+.+-.+|+..+
T Consensus       391 ~~v~~~y~~aw~~G~Gav~idg~MeD~AT~eisR~~lwqW~~h~~~~~  438 (501)
T c3cuxA_         391 ISVGIQYIASWLSGRGAAPIYNLMEDAATAEISRAQVWQWIRHEGGKL  438 (501)
T ss_dssp             HHHHHHHHHHHHTTCCSEEETTEEECHHHHHHHHHHHHHHHHCTTCBC
T ss_pred             HHHHHHHHHHHHCCCCEEEECCEEHHHHHHHHHHHHHHHHHHCCCEEC
T ss_conf             999999999764263215348852377899999999999986075024