15/01/2012 18:01:11 : INFO  : Run start: Sun Jan 15 18:01:11 GMT 2012
15/01/2012 18:01:12 : INFO  : Initialised job
15/01/2012 18:01:12 : INFO  : Renaming log file 'phyre2_20120115_180111.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/552c5a64ad17fc76/phyre_20120115_180111.log'
15/01/2012 18:01:13 : INFO  : Initialised job:
Sequence
>batch____
MMKTKKLMMVALVSSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKN
TSDKDMSGLQGKIADAVKAKGYQVVTSPDKAYYWIQANVLKADKMDLRESQGWLNRGYEG
AAVGAALGAGITGYNSNSAGATLGVGLAAGLVGMAADAMVEDVNYTMITDVQIAERTKAT
VTTDNVAALRQGTSGAKIQTSTETGNQHKYQTRVVSNANKVNLKFEEAKPVLEDQLAKSI
ANIL

15/01/2012 18:01:14 : INFO  : Checked sequence
15/01/2012 18:01:14 : INFO  : Finding homologues with PSI-BLAST
15/01/2012 18:01:14 : INFO  : PSI-BLAST 3 iterations
15/01/2012 18:02:20 : INFO  : PSI-BLAST 5 iterations
15/01/2012 18:03:08 : INFO  : Finished PSI-BLAST
15/01/2012 18:03:08 : INFO  : Running Buildali to generate a3m file
15/01/2012 18:05:22 : INFO  : Converting to HMM
15/01/2012 18:05:23 : INFO  : Calibrating HMM
15/01/2012 18:05:30 : INFO  : Searching HMM database
15/01/2012 18:10:06 : INFO  : Finished buildali
15/01/2012 18:10:07 : INFO  : Predicting secondary structure
15/01/2012 18:10:09 : INFO  : Predicted secondary structure (PSI-Pred)
15/01/2012 18:10:09 : INFO  : Predicting Disordered regions
15/01/2012 18:10:11 : INFO  : Predicted Disorder (Disopred)
15/01/2012 18:10:12 : INFO  : Running memsat_svm check
15/01/2012 18:11:55 : INFO  : Globular protein
15/01/2012 18:11:55 : INFO  : Predicted Transmembrane (memsat_svm) ID '552c5a64ad17fc76'
15/01/2012 18:11:56 : INFO  : Initialising fold library search
15/01/2012 18:11:58 : INFO  : Initialised search input
15/01/2012 18:12:00 : INFO  : Building Ensemble models
15/01/2012 18:12:04 : INFO  : Building hh.c3bf2A_.model.1.pdb
15/01/2012 18:12:16 : INFO  : Building hh.c2jxpA_.model.2.pdb
15/01/2012 18:12:24 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/552c5a64ad17fc76/hh.c2jxpA_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/552c5a64ad17fc76/c2jxpA_.2.pdb
15/01/2012 18:12:27 : INFO  : Building c3bf2A_.1.pdb
15/01/2012 18:12:35 : INFO  : Building c2jxpA_.2.pdb
15/01/2012 18:12:43 : INFO  : Building d2okfa1.3.pdb
15/01/2012 18:12:51 : INFO  : Building d2inba1.4.pdb
15/01/2012 18:13:00 : INFO  : Building d1j1ta_.5.pdb
15/01/2012 18:13:10 : INFO  : Building d1a9xa2.6.pdb
15/01/2012 18:13:23 : INFO  : Building d1nn4a_.7.pdb
15/01/2012 18:13:33 : INFO  : Building c3he8A_.8.pdb
15/01/2012 18:13:42 : INFO  : Building d2ayxa2.9.pdb
15/01/2012 18:13:52 : INFO  : Building d1o1xa_.10.pdb
15/01/2012 18:14:01 : INFO  : Building c3s5pA_.11.pdb
15/01/2012 18:14:07 : INFO  : Building c1ciiA_.12.pdb
15/01/2012 18:14:15 : INFO  : Building c2o6lA_.13.pdb
15/01/2012 18:14:21 : INFO  : Building c2r76A_.14.pdb
15/01/2012 18:14:33 : INFO  : Building d1v7wa2.15.pdb
15/01/2012 18:14:40 : INFO  : Building d1cola_.16.pdb
15/01/2012 18:14:46 : INFO  : Building c3fewX_.17.pdb
15/01/2012 18:14:53 : INFO  : Building d2vvpa1.18.pdb
15/01/2012 18:14:58 : INFO  : Building d1qoja_.19.pdb
15/01/2012 18:15:04 : INFO  : Building c3k7pA_.20.pdb
15/01/2012 18:15:26 : INFO  : Finished HH model building
15/01/2012 18:15:26 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
15/01/2012 18:16:52 : INFO  : html domain output complete ID '552c5a64ad17fc76'
15/01/2012 18:20:48 : INFO  : Run end  : Sun Jan 15 18:20:47 GMT 2012
