Phyre 2 alignment of P13979 with c2r76A_

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Job Description | P13979
Confidence | 20.28% | Date | Thu Jan 5 11:33:52 GMT 2012
Rank | 14 | Aligned Residues | 37
% Identity | 8% | Template | c2r76A_
PDB info | PDB header:lipoprotein | Chain: A: PDB Molecule:rare lipoprotein b; | PDBTitle: crystal structure of the rare lipoprotein b (so_1173) from shewanella2 oneidensis, northeast structural genomics consortium target sor91a
Resolution | 2.60 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | T | S | D | K | D | M | S | G | L | Q | G | K | I | A | D | A | V | K | A | K | G | Y | Q | V | V | T | S | P | D | K | A | Y | Y | W | I | Q | A | N
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template Sequence |  | S | S | S | D | E | Y | K | E | L | T | R | L | V | R | E | R | L | R | L | N | N | V | K | I | V | D | A | A | N | D | V | . | P | V | L | R | L | I
Template Known Secondary structure |  |  |  | S |  | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | S | S |  | S | S | S | . |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |  | . | . | . | . | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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