Phyre 2 Results for P13979

Email | l.a.kelley@imperial.ac.uk
Description | P13979
Date | Thu Jan 5 11:33:52 GMT 2012
Unique Job ID | 552c5a64ad17fc76

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c3bf2A_ |
|  | 81.1 | 15 | PDB header:lipoprotein Chain: A: PDB Molecule:putative lipoprotein; PDBTitle: crystal structure of the a1ksw9_neimf protein from2 neisseria meningitidis. northeast structural genomics3 consortium target mr36a
2 | c2jxpA_ |
|  | 63.2 | 13 | PDB header:lipoprotein Chain: A: PDB Molecule:putative lipoprotein b; PDBTitle: solution nmr structure of uncharacterized lipoprotein b2 from nitrosomonas europaea. northeast structural genomics3 target ner45a
3 | d2okfa1 |
|  | 48.0 | 25 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XisH-like
4 | d2inba1 |
|  | 47.3 | 20 | Fold:Restriction endonuclease-like Superfamily:Restriction endonuclease-like Family:XisH-like
5 | d1j1ta_ |
|  | 34.3 | 33 | Fold:Concanavalin A-like lectins/glucanases Superfamily:Concanavalin A-like lectins/glucanases Family:Alginate lyase
6 | d1a9xa2 |
|  | 31.7 | 15 | Fold:Methylglyoxal synthase-like Superfamily:Methylglyoxal synthase-like Family:Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain
7 | d1nn4a_ |
|  | 29.2 | 25 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
8 | c3he8A_ |
|  | 28.9 | 40 | PDB header:isomerase Chain: A: PDB Molecule:ribose-5-phosphate isomerase; PDBTitle: structural study of clostridium thermocellum ribose-5-phosphate2 isomerase b
9 | d2ayxa2 |
|  | 26.2 | 27 | Fold:Flavodoxin-like Superfamily:CheY-like Family:RcsC linker domain-like
10 | d1o1xa_ |
|  | 23.2 | 28 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
11 | c3s5pA_ |
|  | 22.6 | 24 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: crystal structure of ribose-5-phosphate isomerase b rpib from giardia2 lamblia
12 | c1ciiA_ |
|  | 22.0 | 23 | PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
13 | c2o6lA_ |
|  | 21.4 | 12 | PDB header:transferase Chain: A: PDB Molecule:udp-glucuronosyltransferase 2b7; PDBTitle: crystal structure of the udp-glucuronic acid binding domain2 of the human drug metabolizing udp-glucuronosyltransferase3 2b7
14 | c2r76A_ |
|  | 20.3 | 8 | PDB header:lipoprotein Chain: A: PDB Molecule:rare lipoprotein b; PDBTitle: crystal structure of the rare lipoprotein b (so_1173) from shewanella2 oneidensis, northeast structural genomics consortium target sor91a
15 | d1v7wa2 |
|  | 18.4 | 19 | Fold:Supersandwich Superfamily:Galactose mutarotase-like Family:Glycosyltransferase family 36 N-terminal domain
16 | d1cola_ |
|  | 18.2 | 19 | Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin
17 | c3fewX_ |
|  | 18.2 | 19 | PDB header:immune system Chain: X: PDB Molecule:colicin s4; PDBTitle: structure and function of colicin s4, a colicin with a2 duplicated receptor binding domain
18 | d2vvpa1 |
|  | 15.9 | 20 | Fold:Ribose/Galactose isomerase RpiB/AlsB Superfamily:Ribose/Galactose isomerase RpiB/AlsB Family:Ribose/Galactose isomerase RpiB/AlsB
19 | d1qoja_ |
|  | 15.4 | 60 | Fold:Long alpha-hairpin Superfamily:C-terminal UvrC-binding domain of UvrB Family:C-terminal UvrC-binding domain of UvrB
20 | c3k7pA_ |
|  | 13.6 | 20 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of mutant of ribose 5-phosphate isomerase type b from2 trypanosoma cruzi.
21 | c3m1pA_ |
| not modelled | 13.6 | 20 | PDB header:isomerase Chain: A: PDB Molecule:ribose 5-phosphate isomerase; PDBTitle: structure of ribose 5-phosphate isomerase type b from trypanosoma2 cruzi, soaked with allose-6-phosphate
22 | c1uwvA_ |
| not modelled | 12.2 | 32 | PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase
23 | c1rh1A_ |
| not modelled | 11.9 | 16 | PDB header:antibiotic Chain: A: PDB Molecule:colicin b; PDBTitle: crystal structure of the cytotoxic bacterial protein2 colicin b at 2.5 a resolution
24 | c1v7wA_ |
| not modelled | 10.7 | 18 | PDB header:transferase Chain: A: PDB Molecule:chitobiose phosphorylase; PDBTitle: crystal structure of vibrio proteolyticus chitobiose phosphorylase in2 complex with glcnac
25 | c2lllA_ |
| not modelled | 9.4 | 38 | PDB header:structural protein Chain: A: PDB Molecule:lamin-b2; PDBTitle: solution nmr structure of c-terminal globular domain of human lamin-2 b2, northeast structural genomics consortium target hr8546a
26 | d1ufga_ |
| not modelled | 9.3 | 25 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain
27 | c3jt0B_ |
| not modelled | 8.3 | 32 | PDB header:structural protein Chain: B: PDB Molecule:lamin-b1; PDBTitle: crystal structure of the c-terminal fragment (426-558)2 lamin-b1 from homo sapiens, northeast structural genomics3 consortium target hr5546a
28 | d1x9la_ |
| not modelled | 8.1 | 30 | Fold:Common fold of diphtheria toxin/transcription factors/cytochrome f Superfamily:DR1885-like metal-binding protein Family:DR1885-like metal-binding protein
29 | c2cqtA_ |
| not modelled | 7.6 | 17 | PDB header:transferase Chain: A: PDB Molecule:cellobiose phosphorylase; PDBTitle: crystal structure of cellvibrio gilvus cellobiose phosphorylase2 crystallized from sodium/potassium phosphate
30 | c1w17A_ |
| not modelled | 7.5 | 20 | PDB header:hydrolase Chain: A: PDB Molecule:probable polysaccharide deacetylase pdaa; PDBTitle: structure of bacillus subtilis pdaa, a family 42 carbohydrate esterase.
31 | d1i4ma_ |
| not modelled | 7.3 | 32 | Fold:Prion-like Superfamily:Prion-like Family:Prion-like
32 | d1rh1a2 |
| not modelled | 7.2 | 15 | Fold:Toxins' membrane translocation domains Superfamily:Colicin Family:Colicin
33 | c2yvqA_ |
| not modelled | 7.0 | 13 | PDB header:ligase Chain: A: PDB Molecule:carbamoyl-phosphate synthase; PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens
34 | d2as0a2 |
| not modelled | 6.9 | 18 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:hypothetical RNA methyltransferase
35 | c3sz3A_ |
| not modelled | 6.8 | 40 | PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from vibrio cholerae2 with an endogenous tryptophan
36 | c1vraB_ |
| not modelled | 6.4 | 39 | PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj; PDBTitle: crystal structure of arginine biosynthesis bifunctional protein argj2 (10175521) from bacillus halodurans at 2.00 a resolution
37 | c2vzkD_ |
| not modelled | 6.4 | 44 | PDB header:transferase Chain: D: PDB Molecule:glutamate n-acetyltransferase 2 beta chain; PDBTitle: structure of the acyl-enzyme complex of an n-terminal2 nucleophile (ntn) hydrolase, oat2
38 | c2vfyA_ |
| not modelled | 6.1 | 9 | PDB header:hydrolase Chain: A: PDB Molecule:akap18 delta; PDBTitle: akap18 delta central domain
39 | c3bghB_ |
| not modelled | 5.7 | 22 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative neuraminyllactose-binding hemagglutinin homolog; PDBTitle: crystal structure of putative neuraminyllactose-binding hemagglutinin2 homolog from helicobacter pylori
40 | d1uwva2 |
| not modelled | 5.6 | 32 | Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:(Uracil-5-)-methyltransferase
41 | c3it4B_ |
| not modelled | 5.5 | 22 | PDB header:transferase Chain: B: PDB Molecule:arginine biosynthesis bifunctional protein argj PDBTitle: the crystal structure of ornithine acetyltransferase from2 mycobacterium tuberculosis (rv1653) at 1.7 a
42 | c2k6zA_ |
| not modelled | 5.4 | 17 | PDB header:metal transport Chain: A: PDB Molecule:putative uncharacterized protein ttha1943; PDBTitle: solution structures of copper loaded form pcua (trans2 conformation of the peptide bond involving the nitrogen of3 p14)
43 | d1ul7a_ |
| not modelled | 5.3 | 26 | Fold:TBP-like Superfamily:KA1-like Family:Kinase associated domain 1, KA1
44 | c1qy9B_ |
| not modelled | 5.3 | 22 | PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ydde; PDBTitle: crystal structure of e. coli se-met protein ydde
45 | d1x6va3 |
| not modelled | 5.3 | 5 | Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:Adenosine-5'phosphosulfate kinase (APS kinase)
46 | d1qwia_ |
| not modelled | 5.1 | 15 | Fold:OsmC-like Superfamily:OsmC-like Family:Ohr/OsmC resistance proteins
47 | d1ifra_ |
| not modelled | 5.1 | 25 | Fold:Immunoglobulin-like beta-sandwich Superfamily:Lamin A/C globular tail domain Family:Lamin A/C globular tail domain
48 | c2lbgA_ |
| not modelled | 5.0 | 26 | PDB header:membrane protein Chain: A: PDB Molecule:major prion protein; PDBTitle: structure of the chr of the prion protein in dpc micelles