193 c1yirA_ Probab=35.54   E-value=25  Score=13.93  Aligned_columns=103  Identities=14%

Q ss_pred             HHHHHHHHHHHHHCCCCC--EEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCE-
Q ss_conf             999999999999608972--99981788888653003777778101366787762195889999999999841359829-
Q batch____       477 EEQVAQYQGMLQMFNDKP--VTLRTLDVGADKQLPYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLN-  553 (748)
Q Consensus       477 ~~q~~~y~~~~~~~~~~~--v~iRtlD~g~dk~~~~~~~~e~np~lG~rgir~~l~~~~~~~~qlra~lra~a~~~~~~-  553 (748)
                      +.+..+++..++.+++.+  +.+-|.|.     ...+..--....-+++|||.---.|.-+-.++|..+.. +++.+++ 
T Consensus       239 ~~e~~Af~~~~~~~p~~~~i~L~DTyd~-----~~~l~~~~~~~~~~~~gVR~DSGD~~~~~~~~r~~ld~-~G~~~~~~  312 (390)
T c1yirA_         239 DSQSAALDCWVREYRGLLGIALTDCITT-----DAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLK-LGIDPLTK  312 (390)
T ss_dssp             GHHHHHHHHHHHHHTTSSCEEESCSSCH-----HHHHHHCCHHHHHHCCEEEECSSCHHHHHHHHHHHHHH-HTCCGGGS
T ss_pred             CHHHHHHHHHHHHCCCCCEEEEEECCCH-----HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHH-CCCCCCCE
T ss_conf             0589999999996698878999926785-----89999899985523212313788779999999999997-88984422


Q ss_pred             -EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCEEEECCC
Q ss_conf             -9984579989999999999999999986158876678089998356999999999977197887250
Q batch____       554 -ILLPMVTSLDEVDEARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTN  620 (748)
Q Consensus       554 -im~Pmv~~~~e~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~miE~P~a~~~~~~~~~~~df~siGtn  620 (748)
                       |++-==-+.+.+++..+.++.                                   ..+|.|-||||
T Consensus       313 ~Ii~Sd~ld~~~i~~l~~~~~~-----------------------------------~~~~~fGVGT~  345 (390)
T c1yirA_         313 TLVFSDGLDLPRALKIYRALQG-----------------------------------RINVSFGIGTH  345 (390)
T ss_dssp             EEEECSSCCHHHHHHHHHHHTT-----------------------------------TSEEEEEECHH
T ss_pred             EEEEECCCCHHHHHHHHHHHCC-----------------------------------CCCEEEEECCH
T ss_conf             8998289999999999997317-----------------------------------98308745331