241 d3bofa2 Probab=88.12   E-value=2  Score=22.32  Aligned_columns=179  Identities=11%

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             77899887777568999999999899998579989998426688333699999999999999998621798689834139
Q batch____        22 ALPGDPSFDAQLGMNWVIDKAWDDLMALQNGGVDAVMFSNEFSLPYLTKVRPETTAAMARIIGQLMSDIRIPFGVNVLWD  101 (268)
Q Consensus        22 plpG~P~~~~~~~~~~~~e~A~~da~~l~d~GaDgviIen~~~~p~~~~~~~~~~~~~~~ii~~v~~~~~ipigl~~y~N  101 (268)
                      |..-++...+..+.+++.+....-+..|.++|+|.+.+|-..        +.....+....+++..+..-+++-+..--+
T Consensus       108 P~g~~~~~~~~~~~~e~~~~~~~~~~~l~~~gvD~i~~ET~p--------~~~Ea~a~~~~~~~~~~~~p~~~s~~~~~~  179 (300)
T d3bofa2         108 PTGELPYPLGSTLFEEFYENFRETVEIMVEEGVDGIIFETFS--------DILELKAAVLAAREVSRDVFLIAHMTFDEK  179 (300)
T ss_dssp             CCSCCBTTTSSBCHHHHHHHHHHHHHHHHHTTCSEEEEEEEC--------CHHHHHHHHHHHHHHCSSSCEEEEECCCTT
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCC--------CHHHHHHHHHHHHHHCCCCEEEEEEEECCC
T ss_conf             622346876778989999999999999961899899997679--------989999999999982799849999998789


Q ss_pred             HHHHHCHHHHHCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCEEEEECCCCCCCHHHHHHHHHHCC
Q ss_conf             47741367650441111100123267676301453168877864070225022362155306897000899998521011
Q batch____       102 PVASFDLAMATGAKFIREIFTGAYASDFGVWDTNVGETIRHQHRIGAGEVKTLFNIVPEAAVYLGNRDICSIAKSTVFNN  181 (268)
Q Consensus       102 ~v~~~~ia~~~~a~Fir~~~~~~~~~~~G~i~~d~~~~~~~~~~~~~~~~~i~~dv~~~~~~~~~~~ri~~i~~~a~gf~  181 (268)
                      +...-|      .++...+..-...+..++-..|..-.......+.  .+.-..+..+...|+....-            
T Consensus       180 g~l~~G------~~~~~~~~~~~~~~~~~iGiNC~~~p~~i~~~l~--~l~~~~~~~l~vyPNaG~~~------------  239 (300)
T d3bofa2         180 GRSLTG------TDPANFAITFDELDIDALGINCSLGPEEILPIFQ--ELSQYTDKFLVVEPNAGKPI------------  239 (300)
T ss_dssp             SCCTTC------CCHHHHHHHHHTSSCSEEEEESSSCHHHHHHHHH--HHHHTCCSEEEEECCSSSCE------------
T ss_pred             CCCCCC------CCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHH--HHHHHCCCCEEEEECCCCCC------------
T ss_conf             851899------9889999998754983999808999899999999--98842398199953787743------------


Q ss_pred             CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCE-EEEC--CCCHHHHHHHHHHCCE
Q ss_conf             010789717556888898999999984489959-9976--8999999999965898
Q batch____       182 HPDALCVSGLTAGTRTDSALLKRVKETVPDTVV-LANT--GVCLENVEEQLSIADG  234 (268)
Q Consensus       182 y~~~~~VTG~~tg~~~~~~~l~~~~k~~~~~Pv-~vGf--GIt~env~~~~~~aDG  234 (268)
                            ..+.++-...+.+.+.+..+..-+.-+ ++|+  |.+|++++++.+..++
T Consensus       240 ------~~~~~~~~~~~~~~~a~~~~~w~~~Ga~iiGGCCgt~P~hI~~l~~~l~~  289 (300)
T d3bofa2         240 ------VENGKTVYPLKPHDFAVHIDSYYELGVNIFGGCCGTTPEHVKLFRKVLGN  289 (300)
T ss_dssp             ------EETTEEECCCCHHHHHTTHHHHHHTTCSEECCCTTCCHHHHHHHHHHHCS
T ss_pred             ------CCCCCEECCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC
T ss_conf             ------16884430499899999999999849949975799988999999999618