192 c3alfA_ Probab=97.75   E-value=0.0036  Score=39.35  Aligned_columns=189  Identities=16%

Q ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             88999999999999999679988987036446776565545688863287768989988999999999999999860897
Q batch____       209 IPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKPG  288 (439)
Q Consensus       209 ~PeVr~~i~~~v~Eiv~~YdvDGIhlDd~fYP~~~~~~~~d~~~y~~y~~g~~~~~~WRr~~V~~fV~~i~~~iK~~kp~  288 (439)
                      +++-|+-.++-+.+++++|++|||.+|.-                  ++........+....-+....-.....+..++.
T Consensus        87 ~~~~r~~Fi~~l~~~l~~~~fDGIdiDwE------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  148 (348)
T c3alfA_          87 QPNSRKSFIDSSIRLARQLGFHGLDLDWE------------------YPLSAADMTNLGTLLNEWRTAINTEARNSGRAA  148 (348)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSEEEEECC------------------CCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCC
T ss_pred             CHHHHHHHHHHHHHHHHHCCCCEEEEEEE------------------ECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
T ss_conf             98999999999999987279965799711------------------045541114756468999999999788608883


Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEEEECC-----CCCCCCCCC------------H
Q ss_conf             29998731211477778762111110013444069899987398439974012-----478875332------------7
Q batch____       289 VEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIY-----WPFSRSAAR------------Y  351 (439)
Q Consensus       289 v~~~isp~g~~~n~~~~p~gs~~~~~~~y~~~~~D~~~W~~~G~iD~i~Pq~Y-----~~~~~~~~~------------~  351 (439)
                      ..++++|                ..........-|...+.+  ++|++..|.|     |.....+..            .
T Consensus       149 ~~l~~a~----------------~~~~~~~~~~~~~~~l~~--~~D~i~im~yd~~g~~~~~~~~~~~a~~~~~~~~~~~  210 (348)
T c3alfA_         149 LLLTAAV----------------SNSPRVNGLNYPVESLAR--NLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNHVSG  210 (348)
T ss_dssp             CEEEEEE----------------ESSSEETTEECCHHHHHH--HCSEEEEECCCSSCTTTSTTBCCCSSCSCCTTTCCSH
T ss_pred             EEEEEEC----------------CCCCHHHHCCCCHHHHHH--HCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             1899970----------------577001210686444210--0111333220145677778878888887786676448


Q ss_pred             HHHHHHHHHHHCCCCCEEEEEHHHH--------------------------------------CCCCCCCCCCCCCCCC-
Q ss_conf             8898889987327884188600553--------------------------------------1577544454545688-
Q batch____       352 DVLAKWWADVVKPTRTRLYIGIAFY--------------------------------------KVGEPSKIEPDWMING-  392 (439)
Q Consensus       352 ~~~~~~w~~~~~~~~~~ly~G~~~y--------------------------------------~~~~~~~~~~~~~~~~-  392 (439)
                      ...++.|... --...+|.+|+..|                                      +.-........|.... 
T Consensus       211 ~~~v~~~~~~-g~p~~KlvlGip~yG~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~y~~i~~~~~~~~~~~~~d~~~~  289 (348)
T c3alfA_         211 SDGINAWIQA-GVPTKKLVLGIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVDDGSMTYNRIRDYIVESRATTVYNATIV  289 (348)
T ss_dssp             HHHHHHHHHT-TCCGGGEEEEEESEEEEEEESCTTCCSTTCBEEEECTTSCTTTCEEEHHHHHHHHHHHTCEEEEETTTT
T ss_pred             HHHHHHHHHC-CCCHHHEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCEEEECCCCC
T ss_conf             9999999986-999778798654142022136777677887645677877677862758999987763897799861326


Q ss_pred             --------------CHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCC
Q ss_conf             --------------9899999999986017778799983554113640024788865228
Q batch____       393 --------------GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWG  438 (439)
Q Consensus       393 --------------~~~ei~~Qi~~~r~~~~~~G~~~F~~~~l~~~n~~~~~~~l~~~~~  438 (439)
                                    ++.-|...+++.++.+ ..|.++|+...  + +..|+...+.+.||
T Consensus       290 ~~y~~~~~~~v~y~d~~Sl~~K~~~~~~~~-LgGv~~W~l~~--D-d~~gl~~~~~~~~~  345 (348)
T c3alfA_         290 GDYCYSGSNWISYDDTQTVRNKVNYVKGRG-LLGYFAWHVAG--D-QNWGLSRTASQTWG  345 (348)
T ss_dssp             EEEEEETTEEEEECCHHHHHHHHHHHHHTT-CSEEEEECGGG--S-STTHHHHHHHHHHC
T ss_pred             CCEEEECCEEEEECCHHHHHHHHHHHHHCC-CCEEEEEEECC--C-CCHHHHHHHHHHCC
T ss_conf             435885887998399899999999999739-96799986168--6-74379999898518