141 c1jneA_ Probab=98.41   E-value=6.8e-05  Score=49.91  Aligned_columns=176  Identities=23%

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88899999999999999967998898703644677656554568886328776898998899999999999999986089
Q batch____       208 GIPEVQDWITSIVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIAKVSHTIKSIKP  287 (439)
Q Consensus       208 ~~PeVr~~i~~~v~Eiv~~YdvDGIhlDd~fYP~~~~~~~~d~~~y~~y~~g~~~~~~WRr~~V~~fV~~i~~~iK~~kp  287 (439)
                      ..++-|+-+++-+.+++++|++|||.+|. .||...+..           .+......==+.+...||+++++++++.+.
T Consensus       102 ~~~~~r~~Fi~~iv~~l~~~~~DGidiDW-E~P~~~~~~-----------~~~~~~~~~d~~~f~~ll~~lr~~l~~~~~  169 (400)
T c1jneA_         102 GEKVRQIGFIRSAYELVKTYGFDGLDLAY-QFPKNKPRK-----------VIVDPHAALHKEQFTALVRDVKDSLRADGF  169 (400)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCSEEEEEC-CCCCCCCCC-----------CCCCTTHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEEEE-ECCCCCCCC-----------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             89999999999999999847997789970-035755577-----------776668989999999999999996203697


Q ss_pred             CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHCCCEEEEEEECCCCCCC---------------------
Q ss_conf             72999873121147777876211111001344406989998739843997401247887---------------------
Q batch____       288 GVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLDYIAPQIYWPFSR---------------------  346 (439)
Q Consensus       288 ~v~~~isp~g~~~n~~~~p~gs~~~~~~~y~~~~~D~~~W~~~G~iD~i~Pq~Y~~~~~---------------------  346 (439)
                      .+.+.+.|.      .....+-+.+.+..+               +|+|..|.|--.+.                     
T Consensus       170 ~Ls~a~~~~------~~~~~~~d~~~l~~~---------------vD~i~im~YD~~~~~~~~~~t~~~spl~~~~~~~~  228 (400)
T c1jneA_         170 LLSLTVLPN------VNSTWYFDIPALNGL---------------VDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKD  228 (400)
T ss_dssp             EEEEEECTT------CCHHHHCCHHHHTTT---------------CSEEEECCCCSSCTTTCTTEECCSSCSSCCTTSTT
T ss_pred             EEEEEECCC------HHHCCCCCHHHHHHH---------------CCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             899996268------011225588899853---------------28231243104578876765766577777667765


Q ss_pred             --CCCCHHHHHHHHHHHHCCCCCEEEEEHHHHCCC---------------------------------------------
Q ss_conf             --533278898889987327884188600553157---------------------------------------------
Q batch____       347 --SAARYDVLAKWWADVVKPTRTRLYIGIAFYKVG---------------------------------------------  379 (439)
Q Consensus       347 --~~~~~~~~~~~w~~~~~~~~~~ly~G~~~y~~~---------------------------------------------  379 (439)
                        .....+..++.|.+. --..-+|..|+.+|  |                                             
T Consensus       229 ~~~~~~v~~~v~~~~~~-Gvp~~Klvlgip~y--G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~G~~~y~ei~~~~  305 (400)
T c1jneA_         229 RLAHLNADFQVEYWLSQ-GFPSNKINLGVATY--GNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKL  305 (400)
T ss_dssp             CCTTCSHHHHHHHHHHT-TCCGGGEEEEEESE--EEEEECCGGGCSCCSSCEESCCSBCCCCTTTCCTTEEEHHHHHTTB
T ss_pred             CCCCCCHHHHHHHHHHC-CCCHHHEEEEEECC--CEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHH
T ss_conf             54320499999999976-99988889975435--2144314778776775556656676778766768502099999750


Q ss_pred             ---------------------------------CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHH
Q ss_conf             ---------------------------------75444545456889899999999986017778799983554
Q batch____       380 ---------------------------------EPSKIEPDWMINGGVPELKKQLDLNDAVPEISGTILFREDY  420 (439)
Q Consensus       380 ---------------------------------~~~~~~~~~~~~~~~~ei~~Qi~~~r~~~~~~G~~~F~~~~  420 (439)
                                                       ........|--..++.-|...+++.++.+ +.|.++|+...
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wisydd~~Si~~K~~~a~~~~-lgGv~~W~ld~  378 (400)
T c1jneA_         306 SNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARVKN-LGGVALFDLSY  378 (400)
T ss_dssp             CCTGGGGCCGGGCCBEEECCTTSSSCEEEEECCBTTBCCCEEEEECCHHHHHHHHHHHHHTT-CSEEEEECGGG
T ss_pred             CCCCCEEECCCCCCEEEEECCCCEECCCEEEEECCCCCCCEEEEECCHHHHHHHHHHHHHCC-CCEEEEEEECC
T ss_conf             26775041146653256404542002210355214687648999489999999999999738-95799986138