BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (458 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichi... 944 0.0 UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Esche... 203 1e-50 UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=P... 181 4e-44 UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonel... 165 3e-39 UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 T... 125 4e-27 UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_S... 106 1e-21 UniRef50_B7LR88 Putative uncharacterized protein n=1 Tax=Escheri... 86 3e-15 UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leg... 76 3e-12 UniRef50_D2TZ50 Type III secretion transcriptional regulator Hil... 63 2e-08 UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrh... 61 1e-07 UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobiu... 59 3e-07 UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax... 59 4e-07 UniRef50_A5VGJ6 Transcriptional regulator, CadC n=1 Tax=Sphingom... 59 5e-07 UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax... 58 7e-07 UniRef50_C2HYC0 Transcriptional activator ToxR n=1 Tax=Vibrio ch... 56 3e-06 UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curviba... 55 6e-06 UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobact... 54 1e-05 UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 54 1e-05 UniRef50_A5P8P2 Transcription activator ToxR n=1 Tax=Erythrobact... 54 2e-05 UniRef50_A2SGK5 ATPase-like protein n=1 Tax=Methylibium petrolei... 54 2e-05 UniRef50_A6GR68 Transcriptional regulatory protein-like protein ... 52 5e-05 UniRef50_C5EUU3 Two-component response regulator n=5 Tax=Bacteri... 52 6e-05 UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, ... 52 6e-05 UniRef50_B4RU42 Transcriptional regulator n=2 Tax=Alteromonas ma... 51 7e-05 UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobact... 51 8e-05 UniRef50_B9XFI9 Two component transcriptional regulator, winged ... 51 8e-05 UniRef50_A3W8K2 Putative uncharacterized protein n=1 Tax=Roseova... 51 9e-05 UniRef50_B7XNB3 Invasion protein iagA n=1 Tax=Enterocytozoon bie... 51 1e-04 UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanel... 51 1e-04 UniRef50_B1ZTA9 Transcriptional regulator, CadC n=1 Tax=Opitutus... 51 1e-04 UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vi... 51 1e-04 UniRef50_A4CCM5 N-terminal winged-HTH domain fused to TolB-like ... 51 1e-04 UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured mar... 50 1e-04 UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID... 50 1e-04 UniRef50_A0KFN3 Transcriptional regulatory protein, C terminal n... 50 1e-04 UniRef50_B5WFU1 Transcriptional regulator, winged helix family n... 50 2e-04 UniRef50_Q12K29 Transcriptional regulatory protein-like protein ... 50 2e-04 UniRef50_Q12S47 Transcriptional regulatory protein-like protein ... 50 2e-04 UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanel... 50 2e-04 UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax... 50 2e-04 UniRef50_Q2C702 Putative uncharacterized protein n=1 Tax=Photoba... 50 2e-04 UniRef50_B7RJ24 Putative regulatory protein, possibly two-compon... 50 2e-04 UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regul... 49 3e-04 UniRef50_Q2C4S0 Putative uncharacterized protein n=1 Tax=Photoba... 49 3e-04 UniRef50_B0TTI9 Transcriptional regulator, CadC n=1 Tax=Shewanel... 49 3e-04 UniRef50_D0XZV6 Transcriptional regulator, CadC n=1 Tax=Caulobac... 49 4e-04 UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Ta... 49 4e-04 UniRef50_C5ALJ6 Transcriptional regulator, winged helix family p... 49 5e-04 UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis a... 49 5e-04 UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=... 49 6e-04 UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax... 48 6e-04 UniRef50_C8WKQ8 Two component transcriptional regulator, winged ... 48 6e-04 UniRef50_D0XWC9 Transcriptional regulator, winged helix family n... 48 6e-04 UniRef50_D0I6A9 Putative transcriptional activator ToxR n=1 Tax=... 48 6e-04 UniRef50_C7R8I4 Transcriptional regulator, CadC n=1 Tax=Kangiell... 48 7e-04 UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseud... 48 8e-04 UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanel... 48 9e-04 UniRef50_A6XSQ7 ToxR2 n=9 Tax=Vibrio RepID=A6XSQ7_VIBCH 48 9e-04 UniRef50_B2T985 Transcriptional regulator, winged helix family n... 47 0.001 UniRef50_O06978 Uncharacterized transcriptional regulatory prote... 47 0.001 UniRef50_Q1Z6V5 Putative uncharacterized protein n=1 Tax=Photoba... 47 0.001 UniRef50_Q2YSS2 Response regulator protein graR n=85 Tax=Firmicu... 47 0.001 UniRef50_Q12IY1 Transcriptional regulatory protein-like protein ... 47 0.001 UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein ... 47 0.001 UniRef50_C5D0W4 Transcriptional regulator, CadC n=1 Tax=Variovor... 47 0.001 UniRef50_D2PKG5 Two component transcriptional regulator, winged ... 47 0.001 UniRef50_Q2KD09 Probable two-component response regulator protei... 47 0.001 UniRef50_Q2Y9M2 Transcriptional regulator, putative ATPase, wing... 47 0.002 UniRef50_B4CVJ4 Transcriptional regulator, CadC n=1 Tax=Chthonio... 47 0.002 UniRef50_D1TLZ3 Transcriptional regulator n=3 Tax=Burkholderia R... 47 0.002 UniRef50_D0XI00 Putative uncharacterized protein n=1 Tax=Vibrio ... 47 0.002 UniRef50_UPI0001904B06 probable two-component response regulator... 47 0.002 UniRef50_B8JG07 Transcriptional regulator, CadC n=3 Tax=Anaeromy... 47 0.002 UniRef50_A6AKR5 Transcriptional regulatory protein, C n=3 Tax=Vi... 47 0.002 UniRef50_Q21N82 Response regulator receiver n=1 Tax=Saccharophag... 47 0.002 UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobac... 47 0.002 UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum... 47 0.002 UniRef50_D2T7N3 Probable regulatory protein embR n=3 Tax=Erwinia... 47 0.002 UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultu... 46 0.002 UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdema... 46 0.002 UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, ... 46 0.002 UniRef50_B9BNS9 Transcriptional regulator n=2 Tax=Burkholderia m... 46 0.003 UniRef50_A2PNS6 Putative transcriptional regulator ToxR n=1 Tax=... 46 0.003 UniRef50_Q0HTC3 Lysine decarboxylase transcriptional regulator, ... 46 0.003 UniRef50_A4SQG5 Transcriptional activator CadC n=2 Tax=Aeromonas... 46 0.003 UniRef50_C4U9W3 Transcriptional regulator n=1 Tax=Yersinia aldov... 46 0.003 UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum... 46 0.003 UniRef50_B4SI58 Transcriptional regulator domain protein n=3 Tax... 46 0.003 UniRef50_A3SM14 Adenylate/guanylate cyclase/hydrolase, alpha/bet... 46 0.004 UniRef50_A5IKU4 Two component transcriptional regulator, winged ... 46 0.004 UniRef50_B3QUP3 Two component transcriptional regulator, winged ... 45 0.005 UniRef50_C1XV31 Response regulator with CheY-like receiver domai... 45 0.005 UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, ... 45 0.005 UniRef50_C4Z5K9 Two-component system, OmpR family, response regu... 45 0.005 UniRef50_C7RJ06 Transcriptional regulator, putative ATPase, wing... 45 0.006 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 45 0.006 UniRef50_Q0F0D6 Response regulator in two-component regulatory s... 45 0.006 UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=... 45 0.007 UniRef50_C6XRJ0 Transcriptional regulator, CadC n=1 Tax=Hirschia... 45 0.007 UniRef50_C5CZM5 Transcriptional regulator, winged helix family n... 45 0.008 UniRef50_A5KUS7 DNA-binding transcriptional activator n=1 Tax=Vi... 45 0.008 UniRef50_D0MGG0 Two component transcriptional regulator, winged ... 44 0.009 UniRef50_D1CH01 Two component transcriptional regulator, winged ... 44 0.009 UniRef50_C8WY20 Two component transcriptional regulator, winged ... 44 0.009 UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 44 0.010 UniRef50_A4W108 Response regulator consisting of a CheY-like rec... 44 0.010 UniRef50_Q1ZVU4 Putative uncharacterized protein n=1 Tax=Photoba... 44 0.010 UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax... 44 0.010 UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium... 44 0.010 UniRef50_A8H0E1 Transcriptional regulator, CadC n=2 Tax=Shewanel... 44 0.010 UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas Re... 44 0.010 UniRef50_B1T3K6 Transcriptional regulator, winged helix family n... 44 0.010 UniRef50_Q1DBP1 DNA-binding response regulator n=1 Tax=Myxococcu... 44 0.011 UniRef50_A3EHX3 Putative transcriptional regulator ToxR n=6 Tax=... 44 0.012 UniRef50_B1KEN9 Transcriptional regulator, CadC n=1 Tax=Shewanel... 44 0.013 UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, ... 44 0.014 UniRef50_D0I688 Putative transcriptional regulator ToxR n=1 Tax=... 44 0.014 UniRef50_Q5E341 DNA-binding transcriptional activator CadC n=9 T... 44 0.015 UniRef50_A6Q4X4 Two-component response regulator n=2 Tax=Epsilon... 44 0.015 UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, ... 44 0.015 UniRef50_Q5E5T5 Transcriptional regulatory protein n=1 Tax=Vibri... 44 0.016 UniRef50_B6EKJ8 Putative transcriptional regulator n=1 Tax=Aliiv... 44 0.017 UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidat... 44 0.018 UniRef50_P45606 Phosphate regulon transcriptional regulatory pro... 44 0.019 UniRef50_B0ABP9 Putative uncharacterized protein n=1 Tax=Clostri... 43 0.019 UniRef50_A1S3U8 Periplasmic component of the Tol biopolymer tran... 43 0.020 UniRef50_A3UMM4 Putative uncharacterized protein n=1 Tax=Vibrio ... 43 0.021 UniRef50_A6D0K2 Putative uncharacterized protein n=1 Tax=Vibrio ... 43 0.023 UniRef50_C3NSU2 Transcriptional activator of cad operon n=39 Tax... 43 0.023 UniRef50_B2TAW9 Transcriptional regulator, winged helix family n... 43 0.028 UniRef50_A5L2K7 Putative uncharacterized protein n=1 Tax=Vibrion... 43 0.031 UniRef50_A6FDL9 Putative uncharacterized protein n=1 Tax=Moritel... 43 0.031 UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax... 42 0.032 UniRef50_C7MMC5 Response regulator with CheY-like receiver domai... 42 0.033 UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahel... 42 0.035 UniRef50_A1S2M2 Putative transcriptional regulator, CadC n=1 Tax... 42 0.035 UniRef50_B1QVC8 DNA-binding response regulator n=9 Tax=Bacteria ... 42 0.039 UniRef50_A7FEG6 Transcriptional regulator n=26 Tax=Yersinia RepI... 42 0.039 UniRef50_B0G6G3 Putative uncharacterized protein n=2 Tax=Lachnos... 42 0.040 UniRef50_Q2BXY4 Putative uncharacterized protein n=2 Tax=Photoba... 42 0.041 UniRef50_A8GFV8 Transcriptional regulator, CadC n=1 Tax=Serratia... 42 0.042 UniRef50_A4CDM3 Putative transcriptional regulator n=1 Tax=Pseud... 42 0.049 UniRef50_C6AVM9 Response regulator receiver protein n=1 Tax=Rhiz... 42 0.049 UniRef50_C7RA75 Transcriptional regulator, CadC n=1 Tax=Kangiell... 42 0.054 UniRef50_B1T3M3 Transcriptional regulator, winged helix family n... 42 0.056 UniRef50_Q1Z9C2 Putative uncharacterized protein n=2 Tax=Photoba... 42 0.058 UniRef50_A5L7Z6 Putative uncharacterized protein n=1 Tax=Vibrion... 42 0.060 UniRef50_B9T7I6 Putative uncharacterized protein (Fragment) n=1 ... 42 0.062 UniRef50_D1RR55 Transcriptional regulator, CadC n=1 Tax=Serratia... 42 0.065 UniRef50_B8CPS7 Two-component response regulator, putative n=1 T... 42 0.068 UniRef50_Q5QWN9 N-terminal winged-HTH domain fused to TolB-like ... 41 0.080 UniRef50_A8MLN3 Two component transcriptional regulator, winged ... 41 0.088 UniRef50_A3UR88 Putative transcriptional activator ToxR n=3 Tax=... 41 0.088 UniRef50_C1SND3 Response regulator with CheY-like receiver domai... 41 0.089 UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candi... 41 0.092 UniRef50_A8F5U3 Two component transcriptional regulator, winged ... 41 0.093 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 41 0.098 >UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichia RepID=YGEH_ECOLI Length = 458 Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust. Identities = 458/458 (100%), Positives = 458/458 (100%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV Sbjct: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI Sbjct: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 Query: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD Sbjct: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS Sbjct: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL Sbjct: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL Sbjct: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 Query: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP Sbjct: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 Query: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR Sbjct: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 >UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Escherichia coli RepID=B7NQ98_ECO7I Length = 565 Score = 203 bits (517), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 148/456 (32%), Positives = 242/456 (53%), Gaps = 24/456 (5%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +N + L +GIL N++ +IP KELGV+I+LL + G +V K+ II+ VW Sbjct: 7 KNNTQQYIFGDFVLKNNGILLFKNKEYHIPPKELGVIILLLNADGEIVSKEEIIDKVWSA 66 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 + SDESLTRCIY+LR + + + IET+Y +GYRF+ + NE S ++A+F Sbjct: 67 SVASDESLTRCIYALRKLLHENKQCKYIETVYGRGYRFTVPIVIVTDNEPVKSTTTLAVF 126 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 PF T +++ L L+ ELVQ +S GL P + TN +D + + F+++ P+Y++ Sbjct: 127 PFRTE-GSINVLKLHYELVQGLSKYAFCGLDILPASVTNEASDFSTIHQFINKIGPEYYI 185 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD---------ELHNTSQFIIDNILQTV 234 G++ L+IELI A+ LI +H +D L +I+ I Sbjct: 186 MGQVVHYGKNWRLFIELIHARTHKLI--DHQSIDFNPDNPLSVLLSQVINILIEKIPNIN 243 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 K + ++ D + G+ E+Y +TPES+ RA+ IF ++ Q Sbjct: 244 FKSINTQQMPSLDSAVM-------YMNGRMEMYRYTPESLKRALVIF---RDCVSTQPQN 293 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 T YC LAECH+SLAL G SE + A A+ ++ +I + + L ++GLI+GL + Sbjct: 294 TLPYCCLAECHISLALLGISEQKQAITTAVTSIEKALEINPSNSQALGLLGLISGLKDEH 353 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKEC 414 VS++LF+QA + + +YYY++L+ F N + A I+KS+ LEP + ++K Sbjct: 354 SVSNVLFKQAHLLKPNSPDVYYYQSLLCFLNGDLARAFNLIEKSIALEPNKMGISILKLI 413 Query: 415 VDMYVPNPLKNNIKLYYK-ETESESHRVIIDNILKL 449 + +Y +PL N I +++ + II +IL + Sbjct: 414 I-LYYTSPLDNAISFALNLNSQNTCNNPIITSILAM 448 >UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=Proteobacteria RepID=Q7NUQ7_CHRVO Length = 561 Score = 181 bits (460), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 129/399 (32%), Positives = 207/399 (51%), Gaps = 16/399 (4%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 DG+L +Q+ +P KEL VL LLE+AG +V KD +++ VW + V++ESLTRCIY+LR Sbjct: 23 DGVLCHQEQQISVPPKELAVLTALLEAAGELVSKDALLDKVWPDGDVNEESLTRCIYALR 82 Query: 80 CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQ 139 I + +R I+T+Y KGYRFS V + ++AI PF T LD L L+ Sbjct: 83 RILLEDKSNRYIDTVYGKGYRFSRPVAVVSRPTASAQKCTMAILPFRTD-GQLDSLELHA 141 Query: 140 ELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIE 199 LVQ +S GL P T C D + + + +PDY++ G++ Q L +E Sbjct: 142 ALVQCLSRYSPFGLVVMPATITRNCGDIADIIAMIDQLRPDYYLAGQVQQQGDSWLLRVE 201 Query: 200 LIDAKNLFLIASNHLPVDELHNTS--QFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD 257 L+ A L+ + + + + Q + ++L P+R L + G + S Sbjct: 202 LVRADGHQLVHHESIEIGPGEHIAALQTRLASLL-----PQRIPGL-RWHHGNGSQLDSL 255 Query: 258 EM----LAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK 313 +M L G+ EL TP S+ RA+ +F LQ S Q YC LAEC+++LA G Sbjct: 256 DMAITYLNGRHELQQHTPSSLKRALALF--LQCTSS-QPGNALPYCSLAECYLALAQLGL 312 Query: 314 SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 + E A A + +D + + + L ++ L++ L GQ ++ LFEQA++ + D Sbjct: 313 FDQERALDGAQQAVDRAVALDAANPQALGLLALLSSLRGQQTIAEALFEQARMLAPDSID 372 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 ++YY A F +++I A+ +D L+ +P R A +++ Sbjct: 373 IHYYHAWHLFLSDRIPLAQRSLDACLERDPSRIAASMLQ 411 >UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonella enterica RepID=HILA_SALTY Length = 553 Score = 165 bits (417), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 118/403 (29%), Positives = 203/403 (50%), Gaps = 6/403 (1%) Query: 17 LTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIY 76 L DG L + ++V IP KE VL++LLE+AG +V K+ +++ VW + V++ESLTRCIY Sbjct: 21 LNMDGSLLRSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVNEESLTRCIY 80 Query: 77 SLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLI 136 +LR I + R IET+Y +GYRF+ V + +++AI PF + + Sbjct: 81 ALRRILSEDKEHRYIETLYGQGYRFNRPVVVVSPPAPQPTTHTLAILPFQMQ-DQVQSES 139 Query: 137 LNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTL 196 L+ +V+ +S GL P+ T C + + +PDY+++G++ + N + Sbjct: 140 LHYSIVKGLSQYAPFGLSVLPVTITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNIV 199 Query: 197 YIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS 256 IE++ K L+ + + E H + + + I + + +R + N S Sbjct: 200 QIEIVRVKGYHLLHQESIKLIE-HQPASLLQNKIANLLLRCIPGLRWDTKQISELNSIDS 258 Query: 257 DEM-LAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE 315 + L GK EL +TP S+ +A+ + + N S YC LAEC++S+A G + Sbjct: 259 TMVYLRGKHELNQYTPYSLQQALKLLTQCVNMSPNSIAP---YCALAECYLSMAQMGIFD 315 Query: 316 LELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 + A KA E +++ + + L ++GLI + + V +LF+QA + S A + Sbjct: 316 KQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLSPISADIK 375 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMY 418 YY F ++EEA I++ L+L+P R A + K + Y Sbjct: 376 YYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYY 418 >UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6C4_HAMD5 Length = 275 Score = 125 bits (313), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 106/187 (56%), Gaps = 3/187 (1%) Query: 15 LTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRC 74 TLT D +L+ N+ V +P KE +L++LL+SAG ++ KD +E VW N VS+ESLTRC Sbjct: 16 FTLTADALLSYKNKIVKVPPKEFSILMLLLDSAGVLISKDDFLEKVWPNEFVSEESLTRC 75 Query: 75 IYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDP 134 IY LR + + +R I+T+Y KGYRF V T+ S S+A+ PF D Sbjct: 76 IYVLRRLLHENKNNRYIDTVYGKGYRFIQPV--TQSERFAESQCSLAVLPFKLP-QHFDS 132 Query: 135 LILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVN 194 L+++ L+Q +S GL P N C D+ FL + KP+Y+++ + ++ Sbjct: 133 LMIHDFLIQSLSKYTYSGLNVLPSTLINSCKDYDGIMCFLEKMKPNYYLSAHTINDGDIS 192 Query: 195 TLYIELI 201 +L IELI Sbjct: 193 SLRIELI 199 >UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_SODGL Length = 293 Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 2/206 (0%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +L ++++ I KELGVL +LLESAG +V K II VW V +ESLTRCIY LR I Sbjct: 47 VLFHKDKRLSISPKELGVLSLLLESAGELVTKAQIIHEVWYGGNVGEESLTRCIYVLRRI 106 Query: 82 FEKIGYDRCIETIYRKGYRFSGQVFKT-KINEDNTSDYSIAIFPFTTSLNTLDPLILNQE 140 ++ R I+T+Y KGYRF+ V + + +A+FPF + +D + L Sbjct: 107 LQEEKDRRYIDTVYGKGYRFTLPVTRILPARPGMPARCVLAVFPFRLA-EDIDTVDLQDA 165 Query: 141 LVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL 200 +VQ ++ GL+ P + T C + L + +PDY++TG +L IEL Sbjct: 166 IVQQLAPCSPLGLHVLPTSLTMNCRTTDAMLLLLDKIRPDYYLTGYELNLGGAPSLRIEL 225 Query: 201 IDAKNLFLIASNHLPVDELHNTSQFI 226 + A++ ++ + + L F+ Sbjct: 226 MRAEDHLVLLRERVAKEHLAGDGSFL 251 >UniRef50_B7LR88 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LR88_ESCF3 Length = 173 Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 13/155 (8%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N+ S + E + +G+L +++VY+P KE GVL VLL++ H+V K+ II VW N Sbjct: 8 NEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKIINDVWNN- 66 Query: 65 IVSDESLTRCIYSLRCIFEKIGYD--RCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 VSDESLTRC+Y LR +G D IET+Y +GY+ + V T ++ + + Y Sbjct: 67 AVSDESLTRCVYILR---NALGKDNKHLIETVYNRGYKINATV--TVVDGSSQTKYEELY 121 Query: 123 FPFTTSLNTLDPLILNQELVQ---IISNKKIDGLY 154 F N D + ++ L++ +I KKIDG + Sbjct: 122 HNFPHQQN--DCIKISNTLIKLLALIDAKKIDGQF 154 >UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MK68_RHIL3 Length = 522 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 98/407 (24%), Positives = 174/407 (42%), Gaps = 37/407 (9%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESL 71 LEG TL L G+ PQ VL L+++A +V K ++E+VW V+D+SL Sbjct: 34 LEGETLR----LENGDAIALRPQA-FAVLRHLVQNANRLVSKAELLEAVWGGAAVTDDSL 88 Query: 72 TRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 +CI+ +R +G +R + T+ R+GYR S + + +E SIA+ PF T Sbjct: 89 VQCIHEIR---RALGDERYAVLATVSRRGYRLSLE----RSDESALGGPSIAVLPFATMS 141 Query: 130 NTLDPLILNQELVQ-IISN-KKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGR 186 LV+ II+N KI GL+ ++ F + + + + Y + G Sbjct: 142 GGEPNDYFADGLVEDIITNLSKIPGLFVIARNSSFGFRGEKADLRTIAAELRVRYLLQGS 201 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIID----NILQTVHKPERSVR 242 + Q+ +Y +L+D + + H+ D + + D Q V E SVR Sbjct: 202 LRQSGGRLRIYAQLVDGAS-----ATHVWADRFEGAATDVFDLQDRLTEQIVGSIEPSVR 256 Query: 243 LAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 A+ ++ ++ S D L + TP +A+ + R ++Q + Sbjct: 257 RAEIERAHRKRPESLDAYDLYLRALPHAHANTPAQTDKALQLLAR---SIELQPDYVAAH 313 Query: 299 CLLAECHMSLAL-HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSGQAKV 356 A C+ L +G + AA AL D I + D + ++I + L+ Sbjct: 314 GYAAWCYEQRYLRNGLDPADKAA--ALSHADIALGINSDDPQAMSIGAFVRANLTRDYDA 371 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + ++A + + + + ALV H+E+ + A K+L+L P Sbjct: 372 AVEVLDRALAWNNNSTLAFGFSALVSAHSERHQRAVEHAHKALRLSP 418 >UniRef50_D2TZ50 Type III secretion transcriptional regulator HilA n=1 Tax=Arsenophonus nasoniae RepID=D2TZ50_9ENTR Length = 188 Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +L + E + IP KEL L L+ ++ ++ KD I+ VW+ V DES+ RCIYSLR + Sbjct: 47 MLMKNGEIIAIPPKELRALSCLVANSKKIIKKDDIVAYVWQGGEVKDESVVRCIYSLRKL 106 Query: 82 FEKIGYDRCIETIYRKGYRFSGQV 105 F++ + I TIY +GY F+G V Sbjct: 107 FKQ---ENLIITIYGRGYCFNGDV 127 >UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YSP3_BRASO Length = 1015 Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 31/88 (35%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL 78 ++ +L + E++ + K GVL+ L+E AG +V K+ ++ +VW ++ VS+ SL+ I +L Sbjct: 16 QNALLRRSGERILLAPKPFGVLVHLVERAGELVTKEELLNAVWSDVHVSESSLSVTINAL 75 Query: 79 RCIF-EKIGYDRCIETIYRKGYRFSGQV 105 R + R IET+ R+GYRF V Sbjct: 76 RTALDDNKQSPRYIETVPRRGYRFIAAV 103 >UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZTP7_RHILW Length = 479 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 3/75 (4%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG 86 V I K L +L L+ + G VV KD ++++VW +IV+++SLT+ I +R + IG Sbjct: 4 GRDVEIGAKPLAMLTYLVRNEGRVVSKDELMQAVWPGVIVTEDSLTQAISQIR---KAIG 60 Query: 87 YDRCIETIYRKGYRF 101 D I T++R+GY F Sbjct: 61 ADGLIRTLFRRGYLF 75 >UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMB1_9RHIZ Length = 501 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 20/201 (9%) Query: 14 GLTLT-EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLT 72 G TL G L++ ++ ++ K +L L G VV K ++++VW + V+++SLT Sbjct: 14 GFTLDLGKGTLSRADQPAFLRPKAYALLTHLACHIGRVVPKSELMDTVWPGVFVTEDSLT 73 Query: 73 RCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTL 132 + + +R + +G +R + T+ ++GY V +T+ ++ + +A+ F + Sbjct: 74 QSVREIRKV---LGEER-VRTVSKRGYML---VPETEAVPESGAQPIVAVLRFRN--DGA 124 Query: 133 DPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHIS--------QNSFLSRFKPDYFVT 184 DP NQE+V + I+GL + N S + SR DY V Sbjct: 125 DP--ANQEIVDGFAEDIINGLARFGTVTVLARNSSFSFASHSPAEWPAIRSRIGADYLVE 182 Query: 185 GRINQNNAVNTLYIELIDAKN 205 G + + + LIDA N Sbjct: 183 GSVRRQAERIIAAVSLIDAAN 203 >UniRef50_A5VGJ6 Transcriptional regulator, CadC n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGJ6_SPHWW Length = 382 Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 37/102 (36%), Positives = 58/102 (56%), Gaps = 7/102 (6%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 YHF + + ED L + V + + L L +L+ +AG +V KD + VWK++ V+ Sbjct: 5 GYHFGQFVLDPEDRRLLRDGVPVELNARYLDALALLVRNAGSLVGKDRFLSEVWKDVPVT 64 Query: 68 DESLTRCIYSLRCIFEKIGYDRC----IETIYRKGYRFSGQV 105 DE+LT+CI LR +++G D IET+ + GYRF +V Sbjct: 65 DEALTQCIRLLR---QRLGDDASRPHFIETVPKHGYRFIAEV 103 >UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax=Rhizobiales RepID=B1M5U0_METRJ Length = 525 Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 89/425 (20%), Positives = 160/425 (37%), Gaps = 62/425 (14%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L++ ++ + + +L VL+E VV +D ++E+VW IVS+ +L I + R Sbjct: 17 LSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIVSEATLGSRINAARTAI 76 Query: 83 EKIGYD-RCIETIYRKGYRFSGQV------FKTKINEDNTSD-----------YSIAIFP 124 G R I T+ RKG RF G V I ++ ++ ++A+ P Sbjct: 77 GDTGTGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPGVTWRAGPRLPAVAVLP 136 Query: 125 FTTSLNTLDPL------ILNQELVQIISNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRF 177 FT + DP + +E++ +S ++ GL+ +T + I Sbjct: 137 FTNM--SADPEQDYFADGMTEEIITALS--RVSGLFVIARNSTFTYRGAAIDVRRVGQEL 192 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHN--------------TS 223 Y V G + + + + +L+DA HL D + Sbjct: 193 GVGYVVAGSVRRGGSRLRITGQLVDAGT-----GAHLWADSFDGGLDDVFALQERVAARA 247 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 I+ LQ RL + + + Y D +L L DFT + A+ D Sbjct: 248 AAAIEPTLQLAEI----RRLGRDAPAHPDAY--DRLLRANARLADFTAAGMAAALDHLDE 301 Query: 284 --LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 + + YC A+CH + E E AA A+ L + D ++L Sbjct: 302 ALALDPGYAPAMAAAAYC-RAQCHFQ-GWIAQGEAERAA--AVRLAWGAVERAPGDAQVL 357 Query: 342 AIMGL-ITGLSGQAK-VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + + +S + + LF +A + + + A + + E R ++++L Sbjct: 358 WMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIETMCGRAEAGRAMVERAL 417 Query: 400 QLEPR 404 QL PR Sbjct: 418 QLNPR 422 >UniRef50_C2HYC0 Transcriptional activator ToxR n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HYC0_VIBCH Length = 275 Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 57/96 (59%), Gaps = 3/96 (3%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 D LT GN+ ++ E +L +L++++G VV K +IE W +V++ SL + I ++R Sbjct: 22 DSTLTYGNKNHHLSYTETRILELLIKNSGSVVSKIQLIEYSWTGKVVAETSLAKSISNIR 81 Query: 80 CIFEKIGY-DRCIETIYRKGYRFS--GQVFKTKINE 112 +F + + D I+TI R GYR S V++ K++E Sbjct: 82 KVFRECEFHDDAIQTIPRLGYRLSLRSNVYEEKMDE 117 >UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6H6_9BURK Length = 526 Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 69/311 (22%), Positives = 128/311 (41%), Gaps = 47/311 (15%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG 86 + V + + VL VL++ AG +V K + + VW ++V + +L + SLR I +G Sbjct: 33 GQTVMVGARAFDVLCVLVDHAGELVTKKKLFDLVWPGLVVEENNLQVHVSSLRRI---LG 89 Query: 87 YDRCIETIYRKGYRF------------SGQVFKTKINEDNTSDY--SIAIFPFTTSLNTL 132 D I T+ +GYRF + Q K K + Y +IA+ PF +LN Sbjct: 90 AD-AIATVPGRGYRFTLRLAAVPSAVETAQASKGKGRASDQQAYRRTIAVLPF-VNLNA- 146 Query: 133 DPLILNQE-LVQIISNKKIDGLYTYPM-------AATNFCNDHISQNSFLSRFKPDYFVT 184 DP QE ++ I L P ++ + N S + S + Y V Sbjct: 147 DP---EQEYFSDGLAEDIISHLTKSPWLLVVSRNSSFAYRNTKESNQAVGSALRARYLVL 203 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTV-----HKP 237 G + + + + EL+D + ++ P+ ++ I I+ + H Sbjct: 204 GSVRRAGTMLRMTAELVDTSTGETLWADRFDRPLSDMFAVQAEISGQIVSAIEPVYLHSE 263 Query: 238 ER-SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 ER + + Q+ H+ D ++ + + TPE + +A ++ R +I+ + Sbjct: 264 ERVASEVPNQNM---EHW--DLLMRARWHFWRTTPEHVMQAQSLLTR---ALEIKPGDSA 315 Query: 297 CYCLLAECHMS 307 L++ HM+ Sbjct: 316 SLSLMSFTHMA 326 >UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobacterium angustum S14 RepID=Q1ZPR1_PHOAS Length = 481 Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 3/92 (3%) Query: 15 LTLTEDGILTQGNEQVYIPQKELGVLIVLL-ESAGHVVLKDMIIESVWKNIIVSDESLTR 73 L TE+ + G + YI + + L+ L ++ G V +D +I+ VW +VSD+ +T+ Sbjct: 13 LITTENSLKKSG--KTYILEPRITKLLSFLAQNQGIVFTRDELIDEVWDGAVVSDQVVTQ 70 Query: 74 CIYSLRCIFEKIGYDRCIETIYRKGYRFSGQV 105 I+ LR I +K+ D I TI ++GY+ V Sbjct: 71 SIFELRKILKKLDEDHWIITIPKRGYKLDADV 102 >UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98JB4_RHILO Length = 541 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 87/411 (21%), Positives = 158/411 (38%), Gaps = 44/411 (10%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L +GN + + + +L L+ + VV KD ++++VW+ IVSD +L + + R Sbjct: 42 LRRGNSLIAVEPQVFDLLQYLIRNRERVVSKDDLVDAVWQGRIVSDATLASRVNAARSAL 101 Query: 83 EKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNT------------SDYSIAIFPFTTSL 129 + G R + T R+G+RF G V + E + SIA+ PF Sbjct: 102 QDNGEQQRLVRTFPRRGFRFVGTVHEEAGAEATAPVEPAKPGLGIPARPSIAVLPFVNLS 161 Query: 130 NTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGR 186 D +V+ I +I L+ ++ + + Y + G Sbjct: 162 GDPDQDYFADGMVEDIITGLSRIRWLFVIARNSSFTYKGRAVDMKQVGQELGVRYVLEGS 221 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVD----ELHNTSQFIIDNILQTVHKPERSVR 242 + + + + +LID ++ HL + EL + + + V E ++R Sbjct: 222 VRKVGSRVRITGQLIDTED-----GGHLWAERYDRELTDVFALQDEITISVVAAIEPNLR 276 Query: 243 LAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE-C 297 A+ ++ + S D L ++Y F P+ R + + D Q L E Sbjct: 277 RAEIERVKRQRPDSLDAYDLFLRALPDVYTFMPQGAARGLPLLD--------QALAIEPS 328 Query: 298 YCLL----AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SG 352 Y L+ A H +L + G + E + KA + + D LA+ G GL Sbjct: 329 YALVHGFAAWAHQTLFIRGGMQAEHSG-KASRHAHAAIEHGSGDAMALALAGFTIGLVEH 387 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 K++ F QA S A +Y + + + A +++L+L P Sbjct: 388 DRKLADEAFSQALSLSASCAFVYAFGCVPVAYGGDATRAIDWGEQALRLNP 438 >UniRef50_A5P8P2 Transcription activator ToxR n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8P2_9SPHN Length = 342 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL-RCI 81 L +G E V + + L++L G ++ K ++ VW+ I V+DE+LT+ I +L R + Sbjct: 22 LLRGGEAVELGSRYFDALVLLATHPGELISKTRFMDDVWRGIPVTDEALTQAIRTLRRAL 81 Query: 82 FEKIGYDRCIETIYRKGYRF 101 ++ R IET+ + GYRF Sbjct: 82 GDEASAPRYIETVPKHGYRF 101 >UniRef50_A2SGK5 ATPase-like protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGK5_METPP Length = 977 Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 + +L + + + +P + VL L+ G +V KDM++++VW + VS+ L + +LR Sbjct: 20 NAMLKRHEQALDLPPRAFSVLCELVRRPGQLVTKDMLLDAVWGHHHVSESVLKSAVRTLR 79 Query: 80 CIFEKIG-YDRCIETIYRKGYRF 101 F+ R IET R+GYRF Sbjct: 80 AAFDDDARAPRFIETASRRGYRF 102 >UniRef50_A6GR68 Transcriptional regulatory protein-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GR68_9BURK Length = 510 Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 42/189 (22%), Positives = 90/189 (47%), Gaps = 9/189 (4%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +L + E V + + L+ L+ + V+ KD ++++VW ++V + +LT +LR Sbjct: 18 LLLREGEAVNLGSRTFDFLMCLVTNHTRVLSKDELLQTVWPGMVVEENNLTVQTSALR-- 75 Query: 82 FEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT--SDYSIAIFPFTTSLNTLDPLILNQ 139 K+ + I T+ +GY+FS V +T+++ T +IA+ PF D L + Sbjct: 76 --KLLGSQAISTVTGRGYQFSLPVRRTEVSSKPTVQKHSTIAVLPFKVLGEQTDLRFLAE 133 Query: 140 ELVQ--IISNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTL 196 L++ I ++ G A+T F + ++ + + + V G I + + + + Sbjct: 134 GLLEDVIALLARVPGFLVISQASTQIFDHSSVALPEIAEQLQVQFVVLGSIRRVDEIIRV 193 Query: 197 YIELIDAKN 205 ++L +A+ Sbjct: 194 NVQLAEAQT 202 >UniRef50_C5EUU3 Two-component response regulator n=5 Tax=Bacteria RepID=C5EUU3_9FIRM Length = 223 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 6/100 (6%) Query: 9 YHFLEGLTLTEDGI-LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW--KNII 65 Y +G+TL G+ + GNE+V + Q E VL+VLL++ G V ++M++E VW Sbjct: 127 YLTCDGITLDTSGMRVFCGNEEVTLSQPEYQVLLVLLQNKGRTVPREMLLEQVWDSNGNY 186 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQV 105 V++ +LT I LR K+ C++TI GYR V Sbjct: 187 VNNNTLTVTIKRLR---GKLHQPSCLKTIRSFGYRMEDSV 223 >UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PB9_PSEA6 Length = 756 Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDR-C 90 +P K L VL L + G VV ++ ++ VWK+ +VS SL RCI LR F G + Sbjct: 28 LPPKALAVLTYLAKHQGDVVSQEDLLNQVWKDTVVSPNSLQRCIAQLRKAFGDDGKAQGL 87 Query: 91 IETIYRKGYRFSGQV 105 I+T +KGY + Sbjct: 88 IKTHAKKGYSLEAAI 102 >UniRef50_B4RU42 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RU42_ALTMD Length = 1092 Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL-RCI 81 L+QG + I K + VL++L + G VV D I+ W N + D + + I +L R + Sbjct: 19 LSQGKTKKSIEPKAMDVLLLLCQQKGLVVSADEIVAQCWPNAPIGDNPVHKAITNLRRAL 78 Query: 82 FEKIGYDRCIETIYRKGYRFSGQV 105 +K IETI ++GYR +V Sbjct: 79 GDKAAAPSYIETIRKRGYRVVAEV 102 >UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobacter sp. CCS2 RepID=A4EHZ3_9RHOB Length = 675 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 D +L + QV + + VL +L+++ G V KD +I +VW+++ V+D+SLT+CI +R Sbjct: 19 DCLLDEAGNQVSLRPQSAQVLSLLVDNIGQTVTKDDLISTVWQDVSVTDDSLTQCIADVR 78 Query: 80 CIFEKIGYDRCIETIYRKGYRFS 102 R ++T + GY+ S Sbjct: 79 RALGDTDR-RILKTRPKVGYQLS 100 >UniRef50_B9XFI9 Two component transcriptional regulator, winged helix family n=1 Tax=bacterium Ellin514 RepID=B9XFI9_9BACT Length = 226 Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIVSDESLTRCIYSLRCI 81 L QG +++ + KE +L G + +D I++ VW N I+V+D S+ RC+ +LR Sbjct: 144 LYQGGKEIELTTKEFRLLEFFATRPGRALTRDQILDGVWGNDIVVNDRSVDRCVTTLRAK 203 Query: 82 FEKIGYDRC-IETIYRKGYRF 101 E + I+TI GYRF Sbjct: 204 IETNPHQPVLIQTIRDVGYRF 224 >UniRef50_A3W8K2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W8K2_9RHOB Length = 393 Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%) Query: 24 TQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE 83 ++G+E+ P K +L VLL+ G +V KD ++ VW N+ VSD+SL +C+ +R Sbjct: 4 SRGDERFLRP-KSYRLLEVLLDRRGKLVSKDDLVREVWPNVFVSDDSLAQCVSDVRRALG 62 Query: 84 KIGYDRCIETIYRKGY 99 G + T+ R+GY Sbjct: 63 AEGAG-LLRTVPRRGY 77 >UniRef50_B7XNB3 Invasion protein iagA n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XNB3_ENTBH Length = 79 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 4/51 (7%) Query: 53 KDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFS 102 KD ++E W V++ESLTRCIYSLR + +G D+ I+TIY +GYRF+ Sbjct: 3 KDRLLELAWPQGEVAEESLTRCIYSLR---KHLGADKGFIKTIYGRGYRFT 50 >UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKU4_SHEWM Length = 711 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 2/112 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 LTQ + +P K L VL L ++ VV +D ++ VW N +V+ +L RCI LR Sbjct: 19 LTQKQQSQTLPPKALAVLTCLAKNKASVVSQDELLSHVWPNSVVAPNTLQRCIAQLRKAL 78 Query: 83 EKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLD 133 G R I+T ++GY V + E N ++ + P T ++ D Sbjct: 79 GDDGKVQRYIKTHAKQGYSLEVDVHWQQ-PEPNNANKDSSPLPTTLAVQVED 129 >UniRef50_B1ZTA9 Transcriptional regulator, CadC n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTA9_OPITP Length = 584 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/81 (28%), Positives = 45/81 (55%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKI 85 G ++ + + +L+ L+ VV KD +++++W +IV+D S+ R + +R Sbjct: 20 GPRRLELQPRTFDLLVYLVRHHERVVSKDELLQALWPGVIVTDSSVMRAMSLVRSALRAG 79 Query: 86 GYDRCIETIYRKGYRFSGQVF 106 G I+T R+GYRF+G++ Sbjct: 80 GAANLIDTFSRQGYRFTGELL 100 >UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vibrionales RepID=A5L3N2_9GAMM Length = 492 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 2/117 (1%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 LE + E L + +G + V I ++ +L L + G +D +I +VW Sbjct: 2 LEKNSCFSVDEWLFVPNEGQILFAERTVTIDKRLTKLLEFLCLNPGQTHTRDELINNVWS 61 Query: 63 NIIVSDESLTRCIYSLRCIFEKIG--YDRCIETIYRKGYRFSGQVFKTKINEDNTSD 117 +I+SD+ +T+ ++ LR + ++ ++ I T+ ++GY+F V ++KI D ++ Sbjct: 62 GMILSDQVVTQAVFELRKVLKQNSQQHNSYIITVPKRGYKFEADVIQSKIETDQVAE 118 >UniRef50_A4CCM5 N-terminal winged-HTH domain fused to TolB-like domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CCM5_9GAMM Length = 666 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 5/83 (6%) Query: 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC 80 G L Q E + K L VL VL ++ G +V + ++++VW N +V+ +L RCI LR Sbjct: 14 GELNQHGETQQLEPKVLAVLTVLYQANGMLVSQQTLLDTVWPNTVVAPNALQRCITQLR- 72 Query: 81 IFEKIGYD--RCIETIYRKGYRF 101 + + D I+T ++GYR Sbjct: 73 --KHLADDDKTLIQTFAKRGYRL 93 >UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured marine microorganism RepID=A5CFS8_9ZZZZ Length = 191 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 11/105 (10%) Query: 2 DLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 DL+ F + E G+L QG + ++ + VL+VL G VV ++ ++++VW Sbjct: 7 DLQGGF--ELGPWTVIPERGLLRQGTVKEHLEPMVMDVLMVLASHQGSVVTREQLVDAVW 64 Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRC-----IETIYRKGYRF 101 V+DE++ I +LR K+G D IET+ R+GYR Sbjct: 65 DGRFVADEAIVAKIATLR---HKLG-DHAKNPTYIETVPRRGYRL 105 >UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID=Q988M4_RHILO Length = 168 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 19/143 (13%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +L +G++ V + + LG+LI LLE G +V K ++ VW ++ V +LT I +LR + Sbjct: 42 LLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARVWPDVFVVPTNLTVHISALRRV 101 Query: 82 FEKIGYD--RCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILN- 138 G D R I I +GY+F V T + SL T+ P++ Sbjct: 102 LRD-GRDGNRFIINIPGRGYQFVASV-HTPLQRK-------------ASLETMRPIVPAL 146 Query: 139 QELVQIISNKKIDGLYTYPMAAT 161 +E +QI + + G Y P A Sbjct: 147 EERLQIQAPSEY-GAYGVPTAGP 168 >UniRef50_A0KFN3 Transcriptional regulatory protein, C terminal n=2 Tax=Aeromonas RepID=A0KFN3_AERHH Length = 186 Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 45/83 (54%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L++G + + + KE +L +L + AG V+ + + +++W N +D +L R I SLR Sbjct: 21 LSKGEKDIKLSNKEAELLEMLCDEAGSVIPRSKLQDALWPNQDNTDTNLNRQILSLRRKL 80 Query: 83 EKIGYDRCIETIYRKGYRFSGQV 105 E G I+TI R GY F + Sbjct: 81 ESFGLMDAIDTIPRVGYIFCAPI 103 >UniRef50_B5WFU1 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. H160 RepID=B5WFU1_9BURK Length = 558 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%) Query: 30 VYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKIGYD 88 V + + L +LIVL++ AG VV + M++ W+NI+V + +L I LR + + G Sbjct: 100 VQLGSRALDILIVLIQHAGQVVDRRMLMSRAWRNIVVDESNLRVNIAGLRKALGDGEGRV 159 Query: 89 RCIETIYRKGYRFSGQVFKTKINEDNTS 116 R ++ + GY F GQ+ + +I ++ S Sbjct: 160 RYVKNVPGIGYCFVGQLTRERIVAESGS 187 >UniRef50_Q12K29 Transcriptional regulatory protein-like protein n=2 Tax=Alteromonadales RepID=Q12K29_SHEDO Length = 604 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 6/110 (5%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 +Y F E +E +LT+ + I E VL +LLE A V+ KD I+ VW+N V Sbjct: 1 MNYRFNEFEFDSESLLLTKSGLTLAIRHNEAKVLALLLERADKVLSKDDILSHVWQNRPV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS 116 S++++ + I LR I +G ++ I+T ++GY++ Q+ ++ D+ S Sbjct: 61 SEQAVFQNISHLRSI---LG-NQAIKTFPKRGYQW--QLETVRVTPDSQS 104 >UniRef50_Q12S47 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S47_SHEDO Length = 762 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 +TQ N+ I K L VL L E+ G VV D ++E+VW+ +VS +L R I LR Sbjct: 19 ITQNNQSQIIAPKALAVLTYLAENQGKVVSHDALLENVWQGTVVSPNTLQRSIAQLRKAL 78 Query: 83 EKIGYDRC-IETIYRKGY 99 G + I+T ++GY Sbjct: 79 GDDGKVQVYIKTHAKQGY 96 >UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPW9_SHEWM Length = 693 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 ++ F L L + + I K + VL LL G VV ++ I +S+W + +V Sbjct: 2 TFQFANCLVFPAHNKLEIDGQSIKIEPKIMQVLCFLLRHQGQVVSREFIAQSLWPDTVVG 61 Query: 68 DESLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRF 101 + +TR I+ LR I + + IETI RKGY F Sbjct: 62 LDVITRAIFELRKILNDSAQSPQFIETIARKGYCF 96 >UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B8ESP8_METSB Length = 522 Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 90/418 (21%), Positives = 154/418 (36%), Gaps = 65/418 (15%) Query: 30 VYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL-RCIFEKIGYD 88 + I + +L L+ES V K+ I+ VW ++SD ++ I S R + + G Sbjct: 24 IAIEPQVFALLCFLVESRDRVATKEEIVARVWNGRVISDSAIASRIKSARRALGDDGGAQ 83 Query: 89 RCIETIYRKGYRFSGQV-------------FKTKINEDN-----TSDYSIAIFPFTTSLN 130 R I TI+ G+RF V +T + D TS SIA+ PF L Sbjct: 84 RLIRTIHGIGFRFVADVRLAATRIESIAPTAETAPDTDRSQAVETSRPSIAVLPFRL-LG 142 Query: 131 TLDPLI-----LNQELVQIISNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVT 184 DP L +L+ +S ++ L+ ++ F + Y ++ Sbjct: 143 AADPQFSIGDALPHDLITELS--RLRWLFVIARGSSFRFRGAEPDVGRVRTALNVRYCLS 200 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNI-----LQTVHKP 237 G + +++ + +EL DA++ ++ S +H + I+ + LQ Sbjct: 201 GVVEIHHSAMIISVELSDAEDSGVVWSERFRTQASAVHEIREEIVRAVINALELQIPLNE 260 Query: 238 ERSVRLAKQDQ--GYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 R RL ++ + ++L G +Y F A +F+R + ++ Sbjct: 261 ARRARLKSPERLDAWSAYHL------GLHHMYRFNKADNSVATALFER---AAAMEPGFA 311 Query: 296 ECYCLLAECHMSLAL----HGKSELELAAQKALE------LLDYVSDITTVDGKILAIMG 345 Y L+ H A SE AQ+A E +D + T MG Sbjct: 312 RAYAGLSFTHFQSAFLSYADNVSEAANLAQRAAEQSLERDPVDPFGNFT---------MG 362 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 L G S E+A + + A Y RA +R +D++L L P Sbjct: 363 RAFWLCGDLDASLPWLERANALNPNYAQAKYSRAWAQALLGNAASSRANVDEALALSP 420 >UniRef50_Q2C702 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C702_9GAMM Length = 267 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 44/251 (17%) Query: 24 TQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE 83 + + ++ KE VL +LLE+ + K+++ W IV+++SLT I LR I + Sbjct: 22 SNDGKNAFLTPKEACVLTILLEAKDQCINKEVLFCGCWGETIVTEQSLTNIISKLRKILK 81 Query: 84 KIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSI----AIFPFTTSLNT-----LD 133 + D I T+ ++GY + +TKI ++ SD ++ P T +++T + Sbjct: 82 SVCGDLITISTVIKEGYILE-ILPETKI--EDVSDENLVKEQCCKPATHTMSTDKKRYII 138 Query: 134 PLILNQELVQIISNKKIDGLYTYPMAATNFCND----HISQNSFLSRFKPDYFVTGRINQ 189 I + IIS +YTY + F D +I++N SRF ++ + Sbjct: 139 CSIFFASFLMIIS------IYTYYARKSPFFLDKQEYNITKNINKSRF----YLQSMTKK 188 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPER---SVRLAKQ 246 NA + L+ L + +P D N F+ I Q++ PE+ S+ L Sbjct: 189 RNASDPLFDAL----------AATIPTD--CNLDLFV--RIYQSIDAPEKEGMSIFLVNS 234 Query: 247 DQGYKNHYLSD 257 D Y N YLSD Sbjct: 235 DNQYANFYLSD 245 >UniRef50_B7RJ24 Putative regulatory protein, possibly two-component response regulator n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJ24_9RHOB Length = 521 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 15/120 (12%) Query: 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC 80 GIL +G I + +L +L+ +V KD I+E+VW IVSD ++ I + R Sbjct: 15 GILLEGGRDAPIEPRAFKLLALLVTHHDRIVTKDEIVENVWDGRIVSDAAIATVIKTTRK 74 Query: 81 IFEKIGYD-RCIETIYRKGYRFSGQVFKTKINE--------------DNTSDYSIAIFPF 125 + G + + TI +G RF G + + E S +IAI PF Sbjct: 75 VLSDDGVGQKYLRTIRGRGVRFVGTLMPSLAAEARKPETDQAQPAPVQTASRPTIAILPF 134 >UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M6Q3_RHIL3 Length = 955 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 1/91 (1%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-C 80 +L + E V + + L +LI L E G +V KD +I W N IV + +L I LR Sbjct: 30 LLVKDQEPVAVGSRALEILIALTERPGELVTKDELISRAWPNTIVEESNLRAQIAVLRKA 89 Query: 81 IFEKIGYDRCIETIYRKGYRFSGQVFKTKIN 111 + E R I + +GYRF + ++++ Sbjct: 90 LGEDQSAARYIAAVPSRGYRFIAPLSRSEVK 120 >UniRef50_Q2C4S0 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C4S0_9GAMM Length = 262 Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 7/104 (6%) Query: 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR- 79 +L+ G +Q + E +L +LL A +VLK+ + E W++ +V+D SLT+ I LR Sbjct: 17 AVLSNGEKQQVLNFTEAKLLEILLSKANEIVLKETLKEFAWQHTVVTDSSLTKSIAKLRR 76 Query: 80 ---CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 FE + I TI R GY+F + N D + + S+ Sbjct: 77 ALAFFFED---EELIITIPRVGYKFVSHDVEPVANVDTSIEESL 117 >UniRef50_B0TTI9 Transcriptional regulator, CadC n=1 Tax=Shewanella halifaxensis HAW-EB4 RepID=B0TTI9_SHEHH Length = 331 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKI 85 GN+ V I ++ + +L++L +S K + +W+ +VSD SL++ + R +F + Sbjct: 20 GNQSVAIDERNVTLLLILAQSYPEHCSKQDCLSQIWQETVVSDMSLSKLVSDTRKLFNQA 79 Query: 86 GYDR-CIETIYRKGYRF 101 GY I+T++ +GYR Sbjct: 80 GYQGPLIQTVHGRGYRL 96 >UniRef50_D0XZV6 Transcriptional regulator, CadC n=1 Tax=Caulobacter segnis ATCC 21756 RepID=D0XZV6_9CAUL Length = 497 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 + G E V P + + VL+ L + G ++ +D +I + W IV ++++ R I LR + Sbjct: 15 VAVDGRETVLEP-RVMQVLVALASAGGAILSRDDLILTCWSGRIVGEDAINRVISRLRRL 73 Query: 82 FEKIGYDRCIETIYRKGYR 100 E+IG R IETI + GYR Sbjct: 74 SEEIGGFR-IETITKVGYR 91 >UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Tax=Proteobacteria RepID=A6UHF5_SINMW Length = 531 Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 27/84 (32%), Positives = 48/84 (57%), Gaps = 1/84 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CI 81 LT + V + + +L+ L+ + VV KD ++++VW IVS+ ++T I ++R I Sbjct: 17 LTLRGQVVSVGPQVFDLLLHLVGTRDRVVSKDELLQAVWGGRIVSESTITSHINAVRKAI 76 Query: 82 FEKIGYDRCIETIYRKGYRFSGQV 105 + G R + T+ RKG+RF G + Sbjct: 77 GDTGGEQRLVRTVARKGFRFVGDI 100 >UniRef50_C5ALJ6 Transcriptional regulator, winged helix family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5ALJ6_BURGB Length = 972 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 8/100 (8%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 FS +L L + G+L E V + + L +LI L+++ G V + E+VW + V Sbjct: 29 FSRFWL----LRDAGLLIADGEIVSLGARPLAILIRLIDANGRAVSVAALREAVWPGLEV 84 Query: 67 SDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQV 105 ++ I +LR +G DR IET+ +GYRF+G + Sbjct: 85 DVNTVQSQISALR---RALGEDRDLIETVPARGYRFAGDL 121 >UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJQ2_9RHOB Length = 416 Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 1/64 (1%) Query: 39 VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKIGYDRCIETIYRK 97 +L+ L ++ G V KD I ++W + V+D++L+R I+ LR + + R ++T+ R+ Sbjct: 37 LLVYLAQAKGEVRSKDDIARALWPDASVNDDALSRTIWKLRQALGDDAKSPRFVQTVSRR 96 Query: 98 GYRF 101 GYR Sbjct: 97 GYRL 100 >UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIZ5_ACIBL Length = 717 Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 6/92 (6%) Query: 36 ELGVLIVLLESAGH---VVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG-YDRCI 91 E V+ VL+E A H V+ K+ +I +VW + VSD+ LTRCI +R + + + I Sbjct: 29 EPKVMQVLVELAAHSDEVLSKEHLIHAVWSDTFVSDDVLTRCISEIRRVLDDDARAPKII 88 Query: 92 ETIYRKGYRFSGQVF--KTKINEDNTSDYSIA 121 +TI + GYR V K ++ +S+ S A Sbjct: 89 QTIPKSGYRLIAPVVFDKAAPPKNGSSNGSTA 120 >UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B0UQ98_METS4 Length = 510 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 84/406 (20%), Positives = 159/406 (39%), Gaps = 32/406 (7%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 TE +L + V + + + VL L+ AG V K+ + W ++ V D +LT I + Sbjct: 14 TEMKLLLRDGAPVALGPRAVAVLQALVARAGAPVSKEELFRVAWPDLAVEDSNLTVQIAA 73 Query: 78 LR-CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDY----SIAIFPFTTSLNTL 132 LR + R IET+ R+GYR+ G V + S+A+ P + Sbjct: 74 LRRALAGSEDGARWIETLPRRGYRYVGPVGAAPSMPPVMPRFPDRPSVAVLPLRN--LSG 131 Query: 133 DPL--ILNQELVQIISN--KKIDGLY-TYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 DP + + I+ +I L+ T + + I Y + G + Sbjct: 132 DPAEDYFGDGMAEDITAGLSRIKWLFVTARSSGAVYRGREIDPCEAGRALGARYLLLGSL 191 Query: 188 NQNNAVNTLYIELI--DAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 + A + + L+ +A + + P++ + I +++ + E ++R A+ Sbjct: 192 RKETARIRVALRLVESEAGGVVWAEAYDRPLEGVFALQDDIAMSVVGAI---EPNLRQAE 248 Query: 246 QDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 ++ + S D +L + +++ P RA+ + R +++ + Sbjct: 249 AERVRRLRPESLDAYDLVLRAQSDVFTGMPAESSRALGLLGR---ALELEPRYGLAHAFA 305 Query: 302 AECHMSLALH-GKSELELAA--QKALELLDYVSDITTVDGKILAIMGLITGLSGQ-AKVS 357 A CH +L L G SE++ AA + A + + + D D L G + + Sbjct: 306 AMCHHNLFLRAGLSEVDRAASIRHAEKAIAHGRD----DALALTFAGFSLAMDAHDRRAG 361 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 FE A S A+ Y +VH E A +++L+L P Sbjct: 362 SAAFEAALAVSPSSATTYILGGVVHGWAGDAERAITWGERALRLSP 407 >UniRef50_C8WKQ8 Two component transcriptional regulator, winged helix family n=4 Tax=Bacteria RepID=C8WKQ8_EGGLE Length = 237 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSDESLTRCIYSLRCI 81 L G++ +++ KE + VL+ +AG VV KDM+I VW D ++ + LR Sbjct: 141 LACGSKSIHLSYKEFSLAKVLMANAGQVVSKDMLIAKVWGVESSAEDNNVEAYVSFLRKK 200 Query: 82 FEKIGYDRCIETIYRKGYRF 101 + +G IET+ R GYRF Sbjct: 201 MKFLGSTARIETLRRAGYRF 220 >UniRef50_D0XWC9 Transcriptional regulator, winged helix family n=2 Tax=Caulobacter segnis ATCC 21756 RepID=D0XWC9_9CAUL Length = 955 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 41/81 (50%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEK 84 +G V I + LG+L L+E AG VV K + VW + IV + +L + +LR + + Sbjct: 29 EGETPVRIGNRALGLLTALVERAGEVVTKRELFAKVWPDTIVEEGNLKVHMVALRRVLRQ 88 Query: 85 IGYDRCIETIYRKGYRFSGQV 105 R I T+ +GY F V Sbjct: 89 EAGTRYISTVIGRGYCFVAPV 109 >UniRef50_D0I6A9 Putative transcriptional activator ToxR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I6A9_VIBHO Length = 185 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 10/114 (8%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L N+ + L+ LT D I++ G +E +L +L E+A V+ K+ I + VW Sbjct: 7 LGNQVIFDTLKREVLTTDKIISLGG-------REAAILKLLCENANMVITKEEINDKVWG 59 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYR--FSGQVFKTKINED 113 + VS+ SLT+ I +LR + I C I+TI ++GY G+ + ED Sbjct: 60 KVFVSETSLTKAISNLRKSLQLIDGVMCEIKTIPKEGYMLILEGENLGLMVTED 113 >UniRef50_C7R8I4 Transcriptional regulator, CadC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8I4_KANKD Length = 217 Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%) Query: 35 KELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIE-- 92 K + VL+ L E AG +V KD + E VW + +SD+++ I LR F ++ R E Sbjct: 35 KVMQVLVCLNEHAGELVTKDTLFEEVWHGVSISDDAIYCSISKLRKTFRQVAEHRSPELK 94 Query: 93 TIYRKGY 99 TI R+GY Sbjct: 95 TIARQGY 101 >UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseudomonas fluorescens RepID=Q3KEV5_PSEPF Length = 928 Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-C 80 ++ +G++ + + ++ + +L++LL AG VV K +I VW + +V D +L + +LR Sbjct: 22 LVLEGDQPLRLGRRAMDILLILLAHAGEVVSKQQLIAGVWPDSVVEDINLRVHMAALRKA 81 Query: 81 IFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS 116 + + R I T+ ++GY F V I + T+ Sbjct: 82 LGDGQAGQRYIVTVAQRGYSFVAPVVLQSIEQRPTT 117 >UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK09_SHEWM Length = 711 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKI 85 E + I ++L +L +L++ G V +++I++ +W + IVSD S+++ I LR + + Sbjct: 27 GEWLEIEARQLALLKLLIKHHGEAVSRNLIMDEIWHDTIVSDNSVSQAITQLRKSLQDDK 86 Query: 86 GYDRCIETIYRKGYRFSGQVFKTKINE 112 G R I T+ R GY+ + + K E Sbjct: 87 GTPRFIRTVPRVGYQLIATIEEVKEPE 113 >UniRef50_A6XSQ7 ToxR2 n=9 Tax=Vibrio RepID=A6XSQ7_VIBCH Length = 183 Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 10/114 (8%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L N+ + L+ LT D I++ G +E +L +L E+A V+ K+ I + VW Sbjct: 7 LGNQVIFDTLKREVLTTDKIISLGG-------REASILKLLCENANTVITKEEINDKVWG 59 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYR--FSGQVFKTKINED 113 + VS+ SLT+ I +LR + I C I+TI ++GY G+ + ED Sbjct: 60 KVFVSETSLTKAISNLRKSLQLIDGVMCEIKTIPKEGYMLILEGESLGLMVTED 113 >UniRef50_B2T985 Transcriptional regulator, winged helix family n=2 Tax=Burkholderia RepID=B2T985_BURPP Length = 504 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L + V + + L +LI L++ AG VV + ++ W+NI+V + +L I LR Sbjct: 39 LERSGSVVQLGSRALDILIALIQHAGQVVDRRKLMSRAWRNIVVDESNLRVNIAGLRKAL 98 Query: 83 EKIGYD--RCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 G D R ++ + GY F GQ+ + +I +++S +S Sbjct: 99 GD-GEDGVRYVKNVPGIGYCFVGQLTRERIATESSSHFS 136 >UniRef50_O06978 Uncharacterized transcriptional regulatory protein yvcP n=86 Tax=Firmicutes RepID=YVCP_BACSU Length = 237 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 2/92 (2%) Query: 12 LEGLTLTEDGILTQGNE-QVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI-IVSDE 69 L GLT+ D + N ++ QKE +L + + +V +D ++E++W ++ V D Sbjct: 136 LGGLTIYPDQNEAEWNSVRILFSQKEFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDN 195 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 +LT + LR E G CI TI +GY+F Sbjct: 196 TLTVNVNRLRRKLENAGLTDCISTIRGQGYQF 227 >UniRef50_Q1Z6V5 Putative uncharacterized protein n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z6V5_PHOPR Length = 285 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 47/86 (54%) Query: 16 TLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCI 75 TL +G + + + KE VL L+++A +V KD ++E VW+ ++++S+ + Sbjct: 16 TLVHNGGSSGEIKTFSLSPKEADVLSYLIDNASKLVTKDALVEHVWEEQELNEQSILNVM 75 Query: 76 YSLRCIFEKIGYDRCIETIYRKGYRF 101 LR IF + I+TI +KGY F Sbjct: 76 SKLRSIFRQFDEGELIKTIRKKGYVF 101 >UniRef50_Q2YSS2 Response regulator protein graR n=85 Tax=Firmicutes RepID=GRAR_STAAB Length = 224 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 2/86 (2%) Query: 15 LTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIVSDESLTR 73 + L++D I +G++ +++ + E+ +L +L+ +V +D II ++W + VSD +LT Sbjct: 136 IDLSKDSI-QKGDDTIFLSKTEMIILEILITKKNQIVSRDTIITALWDDEAFVSDNTLTV 194 Query: 74 CIYSLRCIFEKIGYDRCIETIYRKGY 99 + LR +I D IET KGY Sbjct: 195 NVNRLRKKLSEISMDSAIETKVGKGY 220 >UniRef50_Q12IY1 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12IY1_SHEDO Length = 691 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 1/95 (1%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 S+ E L E L QV + K + +L L++ G V+ ++ I ++W N +V Sbjct: 3 SFKLAEYLVYPEHNKLELNGVQVKVEPKIMEILCFLIQHRGQVISREYIATNLWPNSVVG 62 Query: 68 DESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYRF 101 + +TR I+ LR + + IETI +KGY F Sbjct: 63 LDVVTRAIFELRKVLNDSAQNPIFIETIAKKGYCF 97 >UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein n=2 Tax=Shewanella RepID=Q12IZ6_SHEDO Length = 580 Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 4/105 (3%) Query: 7 FSYHFLEGLTL-TEDGILTQGNE-QVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + Y F LTL T G L + ++ +V +P +L VL E+A +V ++ ++E VW ++ Sbjct: 16 YRYQF-NDLTLNTRLGTLVRDDKLEVRLPWLSYRLLSVLCEAAPGIVSQEQLLEKVWPDV 74 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYRFSGQVFKT 108 +V DE+L + I LR + IE I +GYR QV T Sbjct: 75 VVGDETLKQRIKLLRRALNDDAHTPIYIEAIRGRGYRLLPQVIVT 119 >UniRef50_C5D0W4 Transcriptional regulator, CadC n=1 Tax=Variovorax paradoxus S110 RepID=C5D0W4_VARPS Length = 188 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL 78 E G L QG + + K +L L + ++ K +++S+W +++V+ +SL CI L Sbjct: 39 ERGQLRQGGTLIPLSPKPDALLRFFLANPQRLIGKTELMDSLWPDVVVTHDSLVHCIGEL 98 Query: 79 RCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN 114 R G I T R+GY F +V +++ + Sbjct: 99 RSRLGDHGAT-LIATSPRRGYMFDAEVLPVQLDRAD 133 >UniRef50_D2PKG5 Two component transcriptional regulator, winged helix family n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PKG5_9ACTO Length = 226 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW-KNIIVSDESLTRCIYSLRC 80 + T+G ++ + KE GVL L+ GHVV + ++E VW +N +S+ + +LR Sbjct: 142 LATRGGRELSLTLKEFGVLRYLMSRPGHVVSAEELLEHVWDENADPFTQSVRVTVGTLRR 201 Query: 81 IFEKIGYDRCIETIYRKGYRFSG 103 + G + +ET+ +GYR G Sbjct: 202 KLTQEGEEPLLETVIGRGYRLRG 224 >UniRef50_Q2KD09 Probable two-component response regulator protein n=3 Tax=Rhizobium etli RepID=Q2KD09_RHIEC Length = 510 Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust. Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 7/115 (6%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 E+G L + + V I + +L VLL + G VV K ++++VW + V + +L+ I + Sbjct: 15 AENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSKSALMDAVWPGLAVEESNLSVQIAA 74 Query: 78 LRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDN------TSDYSIAIFPF 125 LR + I T+ R GYRFSG+V D S IA+ PF Sbjct: 75 LRKLLGPASDGSEWIATVPRVGYRFSGRVESACDGTDGEWHAQAGSKLGIAVLPF 129 >UniRef50_Q2Y9M2 Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9M2_NITMU Length = 1020 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL- 78 + IL + ++ V + K +L L E AG +V KD ++++VW+ V + L CI + Sbjct: 17 NAILWRNDQVVPLRPKNFAMLCYLAERAGTLVTKDELLDAVWQRRFVGEAVLKVCINEVR 76 Query: 79 RCIFEKIGYDRCIETIYRKGYRFSGQV 105 R + + + + T+ ++GYRF QV Sbjct: 77 RALGDSVSAPTYLLTVPKRGYRFIAQV 103 >UniRef50_B4CVJ4 Transcriptional regulator, CadC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVJ4_9BACT Length = 598 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 42/79 (53%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L GN + + + +L+ L+++ VV KD +++++W ++ V+D SL R I R Sbjct: 17 LRTGNRVLPLQPRVFDLLVYLVKNRDRVVSKDELLDTLWADVTVADGSLQRAISLARTAL 76 Query: 83 EKIGYDRCIETIYRKGYRF 101 + I T RKGYRF Sbjct: 77 AEADAADMIRTYARKGYRF 95 >UniRef50_D1TLZ3 Transcriptional regulator n=3 Tax=Burkholderia RepID=D1TLZ3_9BURK Length = 849 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 10/115 (8%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-C 80 +LT+ ++V I + L +LIVL E G +V + + VWK +V D +L + +LR Sbjct: 20 VLTRNGDEVRIGSRALDILIVLAERGGELVSTRQLRDQVWKESVVDDGALRVHVSTLRKA 79 Query: 81 IFEKIGYDRCIETIYRKGYRFSGQVFKTKINE---------DNTSDYSIAIFPFT 126 + + R I +GYR + V T+ + +T D S P T Sbjct: 80 LSDGQSESRYIVNDNGRGYRLAAPVHSTRATQVTAPAPTAPTSTPDESARALPVT 134 >UniRef50_D0XI00 Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0XI00_VIBHA Length = 267 Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L+ N+ V I +E +L +LLE + VV K I++ W N + + SL + I LR F Sbjct: 29 LSNSNKTVKIGYRESQILTLLLEHSPAVVEKRDIVQFAWGNEYIGETSLAKSISVLRQTF 88 Query: 83 EKIGY-DRCIETIYRKGYRF 101 K+G + I T+ + GYR Sbjct: 89 TKVGMKESPIVTVPKVGYRL 108 >UniRef50_UPI0001904B06 probable two-component response regulator protein n=1 Tax=Rhizobium etli GR56 RepID=UPI0001904B06 Length = 187 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%) Query: 17 LTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIY 76 + E+G L + + V I + +L VLL + G VV K ++++VW + V + +L+ I Sbjct: 54 IAENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSKSALMDAVWPGLAVEESNLSVQIA 113 Query: 77 SLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNT------SDYSIAIFPF 125 +LR + I T+ R GYRFSG+V D+ + IA+ PF Sbjct: 114 ALRKLLGPASDGGEWIVTVPRLGYRFSGRVESASDGADSGWHARAEPNPGIAVLPF 169 >UniRef50_B8JG07 Transcriptional regulator, CadC n=3 Tax=Anaeromyxobacter RepID=B8JG07_ANAD2 Length = 396 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Query: 39 VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRK 97 VL L+ + +V+KD ++ +W + IV+D SL R + R DR + T R+ Sbjct: 36 VLTYLVRNRHRLVVKDELLRELWPDAIVTDASLQRAVSLARRALRPA--DRGLLRTHARQ 93 Query: 98 GYRFSGQVFKTKINEDNTS 116 GYRF G+V +T+ + +T+ Sbjct: 94 GYRFVGEVVETEPDPADTA 112 >UniRef50_A6AKR5 Transcriptional regulatory protein, C n=3 Tax=Vibrio RepID=A6AKR5_VIBHA Length = 250 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L+ G + + I +E +L +LLE + VV K I++ W N + + SL + I LR F Sbjct: 11 LSNGEKTIKIGYRESQILTLLLERSPEVVKKQDIVQFAWGNEYIGETSLAKSISVLRQSF 70 Query: 83 EKIGY-DRCIETIYRKGYRF 101 KIG D I T+ + GYR Sbjct: 71 IKIGIKDSPILTVPKVGYRL 90 >UniRef50_Q21N82 Response regulator receiver n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21N82_SACD2 Length = 231 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-----NIIVSDESLT 72 T+ +T+ EQV + QK+ V + LL + G V+ ++ ++++VW N D ++ Sbjct: 139 TQARTITKQGEQVKVTQKDFDVTVHLLSNVGKVLSREYLLKAVWGVSADLNTRTVDMHVS 198 Query: 73 RCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 R SL I +GY CI TIY+ GYR Sbjct: 199 RVRRSL-GINPDMGY--CITTIYQHGYRL 224 >UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobacter sp. SW2 RepID=C8S437_9RHOB Length = 515 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 15/149 (10%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 F F E G L + V + +K +L + + AG V+ K+ ++ +VW + Sbjct: 4 GTFVVQFAEVTLDMGRGRLIGRDGDVALRRKSFVLLCYMTQHAGQVLTKERLMSAVWPEV 63 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGY------RFSGQVFKTKIN---EDNT 115 VSD+SLT+C++ +R G + T+ +GY + + N Sbjct: 64 TVSDDSLTQCVHDVRRALGGSGASE-LRTVQGRGYLLVLPNQGGNRPIAAPTNGMVPTQL 122 Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQI 144 S+A+ PF DP +L E + + Sbjct: 123 RPGSVAVLPF-----AYDPAVLPDERIWL 146 >UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q89V41_BRAJA Length = 516 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%) Query: 39 VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRK 97 +L+ L+ VV KD +I +W + IVSD +L I + R G R I+TI RK Sbjct: 33 LLLYLVAQRARVVSKDDLISQIWSDRIVSDSALNSRINAARKALGDDGATQRLIKTIPRK 92 Query: 98 GYRFSGQV 105 G+RF G+V Sbjct: 93 GFRFIGEV 100 >UniRef50_D2T7N3 Probable regulatory protein embR n=3 Tax=Erwinia RepID=D2T7N3_ERWPY Length = 299 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 6/96 (6%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N +S F G L + EQ + + +L +L VL E+AG V ++ + VW+ Sbjct: 8 NHWSVDFASGTLLHQSS-----GEQRRLGEYQLKLLRVLAENAGKAVSREELNNLVWERR 62 Query: 65 IVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGY 99 ++ + SL I++LR E G R I T+ +KGY Sbjct: 63 VIGNNSLPNAIHALRIALEDDGKQQRIIRTMPKKGY 98 >UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism RepID=A5CFS9_9ZZZZ Length = 627 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%) Query: 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC 80 G+L QG + + + VL++L G VV D I+E+VW + E++ + I LR Sbjct: 23 GLLRQGETEQRVEPMVMNVLVLLASGNGDVVTTDQIVEAVWGGRSTATEAIVQKIKVLR- 81 Query: 81 IFEKIGYD----RCIETIYRKGYR 100 EK+G D + I+TI + GYR Sbjct: 82 --EKLGDDPKDPKFIQTIPKIGYR 103 >UniRef50_B9YAL6 Putative uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAL6_9FIRM Length = 269 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE-SLTRCIYSL 78 D L++ Q + + E +L +LLE+ VV ++ I+ +W N DE +LT + L Sbjct: 185 DASLSKDGRQCELTKNEFKILQLLLENKNKVVSREKIMLKLWNNDCFVDENTLTVNVNRL 244 Query: 79 RCIFEKIGYDRCIETIYRKGYRF 101 R E++G D CIET GY+ Sbjct: 245 RRKMEQLGIDDCIETRKGLGYQL 267 >UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKQ5_ACIBL Length = 945 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN--IIVSDESLTRCIYSLRC 80 LT+G V + + VL +LLE G +V ++ I + +W + + D+ L I LR Sbjct: 25 LTKGGASVRLQDQPFEVLGLLLERPGEIVSREEIRQRLWSSDTFVEFDDGLNTAIKKLRT 84 Query: 81 IFEKIGYD-RCIETIYRKGYRFSGQV-----FKTKINEDNTSDYSIA 121 + R +ET+ R+GYRF V T E T D IA Sbjct: 85 ALGDSALNPRFVETVPRRGYRFIAPVSVLSPVATPEPESQTEDVVIA 131 >UniRef50_B9BNS9 Transcriptional regulator n=2 Tax=Burkholderia multivorans RepID=B9BNS9_9BURK Length = 963 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 42/93 (45%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L +G + + + + +L+VL+E AG +V K+ + W V + +L I +LR Sbjct: 22 LLRGEIPIALGSRAMEILVVLIEQAGQIVDKETLTRRAWPTTFVEESNLRAQIAALRRAL 81 Query: 83 EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT 115 I + +GYRF+G V + T Sbjct: 82 GDGKSPLLIANVPGRGYRFTGPVVQNPAGASAT 114 >UniRef50_A2PNS6 Putative transcriptional regulator ToxR n=1 Tax=Vibrio cholerae MZO-3 RepID=A2PNS6_VIBCH Length = 253 Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYD-RC 90 I E VL+ L++ +G +V K+ +++ W N +VS+ SL++ I +LR + + + R Sbjct: 30 ISPHEFLVLLELIKKSGEIVSKEELLQKGWPNRVVSENSLSQAIKNLRLLLKDNSKEQRV 89 Query: 91 IETIYRKGY 99 I+TI +KGY Sbjct: 90 IKTIAKKGY 98 >UniRef50_Q0HTC3 Lysine decarboxylase transcriptional regulator, CadC n=3 Tax=Alteromonadales RepID=Q0HTC3_SHESR Length = 1075 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEK 84 G + + K + VL+ L ++AG VV D I+ W + D L + I LR + + Sbjct: 23 GKQVKQLEPKAMDVLLFLCQNAGEVVSSDEIVSHCWPGVDTGDNPLHKIINQLRRALGDS 82 Query: 85 IGYDRCIETIYRKGYRFSGQV 105 R IETI ++GYR +V Sbjct: 83 ATESRYIETIRKRGYRTLAEV 103 >UniRef50_A4SQG5 Transcriptional activator CadC n=2 Tax=Aeromonas RepID=A4SQG5_AERS4 Length = 511 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 2/94 (2%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL 78 +D +L + + +VY+ + + +L L G V +D +I+ VW V+D+ +T+ I+ L Sbjct: 16 DDNMLCRPDREVYLEPRLVNLLRFLACHTGTVFGRDALIKEVWDGAEVTDQVVTQSIFEL 75 Query: 79 RCIFEKIGYDRC--IETIYRKGYRFSGQVFKTKI 110 R I + +D I T+ ++GY+ V ++ Sbjct: 76 RKILKDGRFDATDYIVTVPKRGYKLVASVRPLQV 109 >UniRef50_C4U9W3 Transcriptional regulator n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4U9W3_YERAL Length = 265 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 8/85 (9%) Query: 23 LTQG--NEQVYIPQKELG-----VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCI 75 LT G QV QK LG ++ VLLE AG ++ ++ + VWK ++ + SL I Sbjct: 40 LTSGFITHQVTQEQKRLGEYQLKLISVLLEHAGQILSREQLTTLVWKRRVIGNNSLPNAI 99 Query: 76 YSLRCIF-EKIGYDRCIETIYRKGY 99 ++LR +K R I+TI + GY Sbjct: 100 HTLRMALDDKNKQQRIIQTIPKMGY 124 >UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ML1_BRAJA Length = 944 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 7/103 (6%) Query: 17 LTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIY 76 L +DG+ +V I + +LI L E AG +V K ++ SVW++++V + L + Sbjct: 29 LLKDGV------EVRIGSRGFDILIALTERAGELVSKRDLLFSVWRDVVVDEAVLRVHVA 82 Query: 77 SL-RCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDY 118 SL R + E R I T+ +GY F + + + N +S Y Sbjct: 83 SLRRALGEGQDGARYIVTVSGRGYSFVAPIERKRGNGLASSGY 125 >UniRef50_B4SI58 Transcriptional regulator domain protein n=3 Tax=Stenotrophomonas RepID=B4SI58_STRM5 Length = 774 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Query: 35 KELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF--EKIGYDRCIE 92 K LGVL VL+ G VV ++ + VW + + +++ LT+ + LR +F + IE Sbjct: 42 KALGVLRVLMRQPGRVVTREELFAEVWPDTLPTNDVLTQAVTQLRKVFANDDDNGQAYIE 101 Query: 93 TIYRKGYRF 101 TI + GYR Sbjct: 102 TIAKSGYRL 110 >UniRef50_A3SM14 Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SM14_9RHOB Length = 420 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 47/85 (55%), Gaps = 1/85 (1%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +L + E V++ + +L VL E AG ++ K+ ++E+VW+ + +SD +++ I + R Sbjct: 16 LLLRDGEPVHVEPQVFTLLQVLAERAGQLITKEELVETVWRGLAISDATISARISAARKA 75 Query: 82 FEKIGYDRCI-ETIYRKGYRFSGQV 105 G + I +T++ G+R V Sbjct: 76 IGDTGQAQAILKTVHGCGFRLVAPV 100 >UniRef50_A5IKU4 Two component transcriptional regulator, winged helix family n=6 Tax=Thermotogaceae RepID=A5IKU4_THEP1 Length = 220 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKI 85 +++++P+KE +L+ L E+AG VV ++ ++E+ W++ VS + I +R I + Sbjct: 141 GKRIHLPKKEFEILLFLAENAGKVVTREKLLETFWED-PVSPRVVDTVIKRIRKAIEDDP 199 Query: 86 GYDRCIETIYRKGYRFSG 103 R I+TI+ GY F+G Sbjct: 200 NRPRYIKTIWGVGYMFTG 217 >UniRef50_B3QUP3 Two component transcriptional regulator, winged helix family n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QUP3_CHLT3 Length = 227 Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%) Query: 30 VYIPQKELGVLIVLLESAGHVVLKDMIIESVW-KNIIVSDESLTRCIYSLRCIFEKIGYD 88 +++P+KE +L +L + G V ++M++ VW +NI V+D ++ I +R K G D Sbjct: 154 IFLPRKEFELLWILATNKGKVFSREMLLRRVWGENIYVTDRTVDVHICKVRQRLGKFGED 213 Query: 89 RCIETIYRKGYRF 101 IETI GYR Sbjct: 214 -AIETIKGVGYRL 225 >UniRef50_C1XV31 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=2 Tax=Meiothermus RepID=C1XV31_9DEIN Length = 256 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%) Query: 34 QKELGVLIVLLESAGHVVLKDMIIESVW-KNIIVSDESLTRCIYSLRCIFEK-IGYDRCI 91 ++E+G+L +L E AG VV +D I++ VW +I S ++ I LR +FE + + Sbjct: 169 EREIGILRLLAERAGEVVSRDEILDRVWGGDIFPSSRTVDNFIVRLRKLFEPDPAHPIYL 228 Query: 92 ETIYRKGYRFS 102 T++ GYRF+ Sbjct: 229 HTVWGVGYRFT 239 >UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISH8_ACIBL Length = 619 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 14/197 (7%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN--IIVSDESLTRCIYSLR- 79 L + +V + +K + +L+ L+ +V ++ II +W+ I ++ +L + +R Sbjct: 49 LRRSGSRVKLEKKPMELLMFLVSRREQMVTREEIIRKIWRTDLFIDAERNLNNIVRKIRT 108 Query: 80 CIFEKIGYDRCIETIYRKGYRFSG--QVFKTKINEDNTSD-------YSIAIFPFTTSLN 130 + + R +ET+ GYRF G +V + + T D SIA+ P + Sbjct: 109 ALGDDPDRPRFLETVVGVGYRFIGPMRVVEAQFPRAETLDIPIDETSRSIAVLPLVMAGK 168 Query: 131 TLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRIN 188 D + ++ + K+ G+ P +AT + +S ++ + V G I Sbjct: 169 ANDDEGVGIGFADALAAQLGKLQGVVVLPSSATIHFSAAVSPKEVAAKLATRFVVHGAIR 228 Query: 189 QNNAVNTLYIELIDAKN 205 L +E++DA + Sbjct: 229 LQKGEWRLSVEMLDAHS 245 >UniRef50_C4Z5K9 Two-component system, OmpR family, response regulator n=3 Tax=Clostridiales RepID=C4Z5K9_EUBE2 Length = 262 Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 3/97 (3%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +N +Y +E L G++ ++++ + + E+ + + LL H+V +D ++ +W N Sbjct: 165 DNTTTYRGME--ILPHKGVIKYKDDEITLTKNEMTIFMYLLSHREHIVSRDELMTELWNN 222 Query: 64 -IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGY 99 ++D +LT I LR F+ IG + IET +GY Sbjct: 223 EEYLNDNALTVNISRLRGRFKDIGLEDVIETRKGQGY 259 >UniRef50_C7RJ06 Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ06_9PROT Length = 975 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L + V + + VL L+ AG ++ + +++ VW + V+D L I LR + Sbjct: 33 LLRDGTAVALAPRPFAVLCALVRHAGSLLTTNALLDEVWGHQFVTDSVLRTAISELRTVL 92 Query: 83 EKIGY-DRCIETIYRKGYRF 101 + R IET+ R+GYRF Sbjct: 93 DDDARKPRYIETVSRRGYRF 112 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 48/80 (60%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CI 81 L+ G+++V + + + +L++ ++ G V+ K+ I+ ++W+ +V+D+SL I LR + Sbjct: 35 LSSGDQRVELEHRLVALLLMFIDHPGEVLEKERILATIWQGKVVNDDSLAVAISHLRKAL 94 Query: 82 FEKIGYDRCIETIYRKGYRF 101 + R I+TI GY+F Sbjct: 95 GDNPRSPRYIKTIPGVGYQF 114 >UniRef50_Q0F0D6 Response regulator in two-component regulatory system with PhoR (Or CreC), regulates pho regulon (OmpR family) protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F0D6_9PROT Length = 254 Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust. Identities = 25/91 (27%), Positives = 49/91 (53%), Gaps = 2/91 (2%) Query: 13 EGLTLTED-GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIVSDES 70 +G+ L D ++ +GN +V + E +L +L++ G +D +++ VW N + V + Sbjct: 157 QGIQLDPDVPVVFEGNVRVDLRPMEYKLLQMLMKKPGKTRSRDYLLDHVWGNDVYVEPRT 216 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 + + LR +++G C+ET+ GYRF Sbjct: 217 VDVTVKRLRKALKELGRKNCVETVRGMGYRF 247 >UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5N5_9RHOB Length = 813 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%) Query: 33 PQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYD-RCI 91 PQ L LI ++ + G +V KDM+ E+ W + +VSD +L+ + + R + G + R I Sbjct: 28 PQA-LEFLIHMIRNRGQLVTKDMLHETFWPDRVVSDAALSTLVRNARRLVGDSGEEQRII 86 Query: 92 ETIYRKGYRFSGQVFKTKINE 112 T Y +G+ F +V + K E Sbjct: 87 ATRYGRGFVFRAEVEERKGPE 107 >UniRef50_C6XRJ0 Transcriptional regulator, CadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRJ0_HIRBI Length = 398 Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 7/109 (6%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +N + F E + + G +T + + + K L +L+E G + K+ ++E++W + Sbjct: 6 QNTRVFKFGEFVLDRDLGTITFEGDDLKLRPKAYEFLSLLVEGRGRLFSKEELLETLWPH 65 Query: 64 IIVSDESLTRCIYSLRCIF---EKIGYDRCIETIYRKGYRFSGQVFKTK 109 + ++ESL R + + RC EK I TI ++GYR VF K Sbjct: 66 VFATEESLARVVSTCRCALGDEEKT----IIVTIPKRGYRIGLPVFTDK 110 >UniRef50_C5CZM5 Transcriptional regulator, winged helix family n=3 Tax=Variovorax paradoxus S110 RepID=C5CZM5_VARPS Length = 953 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 7/113 (6%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKI 85 + V + + +L+ LL G VV KD ++ +VW ++V + S+ I +LR + E Sbjct: 44 GQSVRLGSRSFELLLQLLRRVGEVVGKDELLATVWAGVVVEESSVRVHISALRKALGEPQ 103 Query: 86 GYDRCIETIYR---KGYRFSGQVFKTKIN---EDNTSDYSIAIFPFTTSLNTL 132 D C E I +GYRF+G VF+ ++ ED ++A L L Sbjct: 104 DGDNCKEWISNIPLRGYRFNGTVFREQVGMPTEDRPGAAALAFAKLPERLTRL 156 >UniRef50_A5KUS7 DNA-binding transcriptional activator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KUS7_9GAMM Length = 615 Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + Y F L + ++ L NE V I + +L ++ V +D +I VW I Sbjct: 5 RIQYSFDVWLFIPDEDKLIMDNEDVIIDNRLSKLLDFFCQNPNIVFSRDELINEVWNGSI 64 Query: 66 VSDESLTRCIYSLRCIFE-----KIGYDRCIETIYRKGYRFSGQVFKT 108 ++D+ +T+ I+ LR + +GY I T+ ++GY+F +V KT Sbjct: 65 LTDQVITQAIFELRKTLKSAERHSMGY---IITVPKRGYKFDVEVKKT 109 >UniRef50_D0MGG0 Two component transcriptional regulator, winged helix family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MGG0_RHOM4 Length = 246 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD---ESLTRCIYSLRCI 81 +G+E++ EL VL L+ G VV ++ ++ VW IV D ++ R I S+R Sbjct: 154 RGSERINFTAMELNVLRYLIHHRGEVVTREQLLRDVWH--IVGDVETRTIDRHIASIRKK 211 Query: 82 FEK-IGYDRCIETIYRKGYRFSGQ 104 E + R IET+Y KGYR + Sbjct: 212 IEPDLRQPRYIETVYGKGYRLRAE 235 >UniRef50_D1CH01 Two component transcriptional regulator, winged helix family n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CH01_THET1 Length = 238 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 13/96 (13%) Query: 20 DGILTQGNEQVYIPQKEL-------GVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLT 72 D +L + QVY+ K L +L +L+ AG V+ D+I+E VW V D L Sbjct: 136 DLLLDPCSRQVYLRGKPLHLTSTEYRLLELLVRHAGQVLPHDLIMERVWGPTYVGDHQLL 195 Query: 73 RCIYSLRCIFEKIGYD----RCIETIYRKGYRFSGQ 104 + +R + K+G D R I+T + GYRF GQ Sbjct: 196 KVF--IRRLRHKLGDDPEQPRYIQTEWGMGYRFVGQ 229 >UniRef50_C8WY20 Two component transcriptional regulator, winged helix family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WY20_ALIAD Length = 224 Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 1/78 (1%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSDESLTRCIYSLRCIFEK 84 GNE + + KE +L LL G +++++ I VW + V D ++ ++ LR + Sbjct: 145 GNEPIKLSDKEFDLLEYLLSHRGQILMRERIFNRVWGIDSDVMDTTVDLYVHYLRKKLQP 204 Query: 85 IGYDRCIETIYRKGYRFS 102 GYD I T+ GY +S Sbjct: 205 FGYDTAIRTVRNVGYMWS 222 >UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT48_9RHOB Length = 493 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 48 GHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 G V +D +IE +W+ V+ +S+ +CI +R + E I R +ET+ RK YR Sbjct: 8 GETVNQDALIEEIWQGRAVTPDSVAQCIAEIRRVLEDID-KRIVETVPRKVYRL 60 >UniRef50_A4W108 Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=28 Tax=Streptococcaceae RepID=A4W108_STRS2 Length = 224 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIVSDES 70 ++ L+ DG + +EQV + E +L LLE G +V KD ++E +W+N + + Sbjct: 134 IDQFQLSLDGRFSNESEQVQLSPTETKILSALLERQGQIVSKDELLEKLWENEEFIDQNT 193 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGY 99 L + LR ++G++R I T+ GY Sbjct: 194 LNVNMTRLRKKVSEVGFER-IHTVRGVGY 221 >UniRef50_Q1ZVU4 Putative uncharacterized protein n=1 Tax=Photobacterium angustum S14 RepID=Q1ZVU4_PHOAS Length = 262 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 ++ G+L+ +Q + E +L +LLE +V K+ + W++ +V+D SLT+ I Sbjct: 17 SKKGLLSDSCQQHLLTYTESRLLTLLLERQNEIVSKEELKTFAWEHTVVTDSSLTKSIAK 76 Query: 78 LR-CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINED 113 +R + D I T+ R GYR + KT +ED Sbjct: 77 IRQSLSTYFPNDEIIATVPRVGYRLDLE--KTSFSED 111 >UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax=Shewanella amazonensis SB2B RepID=A1S359_SHEAM Length = 729 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N Y + + E ++ + + + + VL+ LLE AG V +D +I VW+ Sbjct: 3 NNKKYRLGPYMVIPERCVIAKNGSDTKLELRVMQVLVCLLERAGRPVSRDELIREVWRGG 62 Query: 65 IVSDESLTRCIYSLR-CIFEKIGYDRCIETIYRKGY 99 VSD ++ R I LR + + + I+T+ + GY Sbjct: 63 QVSDNAINRIIAQLRSALGDDARSQQVIQTVPKVGY 98 >UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89GS8_BRAJA Length = 947 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 17 LTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIY 76 L + +L + +++ + L +LI L E AG VV K +I+ VW + V + SL I Sbjct: 19 LAKSRLLEKDGAPLHLGGRALDILIFLAERAGEVVDKRELIKRVWSGVTVDEGSLRFHIT 78 Query: 77 SLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTKINEDNTS 116 +LR G R + + +GY F+ + +E TS Sbjct: 79 TLRKALGDAGEGARYVVNVPGRGYCFTAPLLHPAPSESRTS 119 >UniRef50_A8H0E1 Transcriptional regulator, CadC n=2 Tax=Shewanella RepID=A8H0E1_SHEPA Length = 308 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYD-RC 90 I ++ + +L +L E K + +W+ IVSD SL++ + R +F K GY Sbjct: 26 IDERNMTLLAMLAERYPDYCTKQECLALIWQETIVSDMSLSKLVSDTRKLFCKAGYQGPL 85 Query: 91 IETIYRKGYRFSGQVFKTKINEDNTSD 117 I+T++ +GYR Q+ K + + + +D Sbjct: 86 IQTVHGRGYRLEHQLGKQLLAQADKND 112 >UniRef50_B0RLM8 Transcriptional regulator n=6 Tax=Xanthomonas RepID=B0RLM8_XANCB Length = 1172 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%) Query: 13 EGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLT 72 E L L DG E++ + + + VL+ L E AG V+ + ++ VW D + Sbjct: 86 ERLMLIGDG------ERITLEPRMMEVLVALAERAGEVISAEQLLIDVWHGSFYGDNPVH 139 Query: 73 RCIYSLRCIFEKIGYD----RCIETIYRKGYRF 101 + I LR K+G D R IETI ++GYR Sbjct: 140 KTIAQLR---RKLGDDSRQPRFIETIRKRGYRL 169 >UniRef50_B1T3K6 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3K6_9BURK Length = 465 Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust. Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 4/84 (4%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L G ++V I + +L++LLE G V K+ I+E+VW+ IV + +L I SLR Sbjct: 23 LVHGGKKVEIGNRAFDLLLLLLEERGVAVSKNRIMEAVWRGRIVGENALEAQISSLR--- 79 Query: 83 EKIGYDR-CIETIYRKGYRFSGQV 105 + DR I T+ +GY+F GQ+ Sbjct: 80 RALSEDRKAILTVAGRGYQFVGQL 103 >UniRef50_Q1DBP1 DNA-binding response regulator n=1 Tax=Myxococcus xanthus DK 1622 RepID=Q1DBP1_MYXXD Length = 224 Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 1/91 (1%) Query: 15 LTLTED-GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTR 73 LTL D G +G V++ + E +L +L+E+A V + +W + +L Sbjct: 132 LTLEPDTGQARRGVRTVHLNKTETLLLRLLMEAAPEPVSPATLAHHLWGDDAPESSALRT 191 Query: 74 CIYSLRCIFEKIGYDRCIETIYRKGYRFSGQ 104 +Y+LR ++G CI T+ KGYR + Sbjct: 192 HVYALRGALSELGMSDCITTLRNKGYRLDAR 222 >UniRef50_A3EHX3 Putative transcriptional regulator ToxR n=6 Tax=Vibrio RepID=A3EHX3_VIBCH Length = 255 Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%) Query: 28 EQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG- 86 EQ+ + E VL+ L E AG ++ K+ +I+ W V+D SLT+ + ++R G Sbjct: 23 EQIKLGTHEHLVLLALCEQAGKLIDKETLIKKGWPGKFVTDSSLTQAVRNIRAYLNDDGK 82 Query: 87 YDRCIETIYRKGY 99 + I+TI +KGY Sbjct: 83 SQKHIKTIAKKGY 95 >UniRef50_B1KEN9 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KEN9_SHEWM Length = 325 Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 HF E TE L E V + ++ + +L+E K ++ +W N +VSD Sbjct: 4 HFEEFSINTETFELVIAKELVQLDERVFQLFKLLIEDYPAHCSKQRCLDRIWPNTVVSDM 63 Query: 70 SLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQV 105 SL + + R +F+K G IET++ +GYR S ++ Sbjct: 64 SLAKLVSDTRKLFKKAGCQAPIIETVHGRGYRLSKEL 100 >UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, CadC n=2 Tax=Rhizobiales RepID=Q1QIX2_NITHX Length = 574 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 5/91 (5%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKI 85 G E + + K L +LI+ + G V+ K ++++VW N+ V D+SL +CI +R + Sbjct: 21 GGEALKLRPKTLCLLILFATNPGRVLSKRELMDAVWPNVHVGDDSLFQCIREIRT---AL 77 Query: 86 GYDR--CIETIYRKGYRFSGQVFKTKINEDN 114 G +R + + GY F +V + D Sbjct: 78 GDERRQLVRLVSGHGYVFEAEVSVQAASSDT 108 >UniRef50_D0I688 Putative transcriptional regulator ToxR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I688_VIBHO Length = 266 Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%) Query: 39 VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRK 97 VL+ L E+ G V+ K++++E W VSD SLT+ I ++R G + I+TI +K Sbjct: 43 VLLALCENPGKVIDKNLLLEIGWPGKFVSDSSLTQAIRNIRAYLNDDGKSQKHIKTITKK 102 Query: 98 GY 99 GY Sbjct: 103 GY 104 >UniRef50_Q5E341 DNA-binding transcriptional activator CadC n=9 Tax=Vibrionaceae RepID=Q5E341_VIBF1 Length = 541 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 21/96 (21%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL 78 E+ L + + +V + + + +L L + +G V +D +I+ VW V+D+ +T+ I+ L Sbjct: 16 EENKLYRQDREVSVEPRLINLLRFLAQHSGEVFCRDELIKHVWDGAFVTDQVVTQSIFEL 75 Query: 79 RCIFE--KIGYDRCIETIYRKGYRFSGQVFKTKINE 112 R + ++ R + T+ ++GY+ + + ++ + Sbjct: 76 RKVLRDGRLDNTRYLVTVPKRGYKLVAETKQIRLED 111 >UniRef50_A6Q4X4 Two-component response regulator n=2 Tax=Epsilonproteobacteria RepID=A6Q4X4_NITSB Length = 218 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 10/95 (10%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIV 66 YHF E +L +G+E + + QKEL +L + +++ VV K+ I +++W + I+ Sbjct: 131 GYHFY-----PEQFLLKKGSEVIELKQKELQLLHLFVKNRKKVVTKEQIFQTLWSHEEII 185 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 S+ SL I +L+ IF K I+ I GYRF Sbjct: 186 SEGSLRVYISTLKKIFGK----DSIQNIRSIGYRF 216 >UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHU2_ACIBL Length = 323 Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK--NIIVSDESLTRCIYS 77 G L + ++ + ++ VL +LL+ AG VV ++ I + +W + D SL I Sbjct: 61 SGELRKNGAKLKLQEQPFQVLALLLDRAGQVVTREEIQQKLWPADTFVDFDHSLNTAINK 120 Query: 78 LRCIFEKIGYD-RCIETIYRKGYRFSGQV 105 LR + + R IET+ R+GYRF V Sbjct: 121 LRDVLGDTASNPRFIETLPRRGYRFIAPV 149 >UniRef50_Q5E5T5 Transcriptional regulatory protein n=1 Tax=Vibrio fischeri ES114 RepID=Q5E5T5_VIBF1 Length = 426 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCI 91 I K+ +L L+ + G V K+ I+E VWK++ V+D+ + + ++ LR +F+ + I Sbjct: 27 IEGKQSSLLSFLIRNEGVVFSKEEILEKVWKSV-VTDQVVVQAVFKLRKLFKDNNLESPI 85 Query: 92 ETIYRKGYRFSGQVFK 107 TI +KGY + + K Sbjct: 86 VTIPQKGYLYESRTIK 101 >UniRef50_B6EKJ8 Putative transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EKJ8_ALISL Length = 542 Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/85 (27%), Positives = 46/85 (54%), Gaps = 2/85 (2%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSL 78 E+ L + + +V + + + +L L + +G V +D +I+ VW V+D+ +T+ I+ L Sbjct: 16 EENKLYRQDREVSVEPRLVNLLRFLAQHSGEVFCRDELIQHVWDGAFVTDQVVTQSIFEL 75 Query: 79 RCIFEKIGYD--RCIETIYRKGYRF 101 R I D R + T+ ++GY+ Sbjct: 76 RKILRDGRLDNARYLVTVPKRGYKL 100 >UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01WH4_SOLUE Length = 616 Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust. Identities = 27/111 (24%), Positives = 56/111 (50%), Gaps = 1/111 (0%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 +Y F L + +L +G++ + +P K L++L+ + GH++ K +++++W + V Sbjct: 25 AYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPDSFVE 84 Query: 68 DESLTRCIYSLR-CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSD 117 + +L I +R + + G I+T+ + GYRF V T+D Sbjct: 85 EVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTAD 135 >UniRef50_P45606 Phosphate regulon transcriptional regulatory protein phoB n=201 Tax=Proteobacteria RepID=PHOB_SHIDY Length = 229 Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 4/94 (4%) Query: 12 LEGLTL--TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSD 68 ++GL+L T ++T G E + + E +L + V ++ ++ VW N+ V D Sbjct: 134 MQGLSLDPTSHRVMT-GEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVED 192 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS 102 ++ I LR E G+DR ++T+ GYRFS Sbjct: 193 RTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFS 226 >UniRef50_B0ABP9 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABP9_9CLOT Length = 223 Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust. Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSDESLTRCIYSLRCIFEKI 85 +E++ + K+ +L LL + G ++LK+ I + VW + V+ E + I LR K Sbjct: 145 DEEIELQNKQFNLLEYLLLNKGSILLKEQIYDRVWGIDSDVTIEIVEVYISHLRKKLSKY 204 Query: 86 GYDRCIETIYRKGYRFSGQ 104 GYD+CI+T + GY F + Sbjct: 205 GYDKCIKTKRKVGYMFDDK 223 >UniRef50_A1S3U8 Periplasmic component of the Tol biopolymer transport system-like protein n=1 Tax=Shewanella amazonensis SB2B RepID=A1S3U8_SHEAM Length = 700 Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust. Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%) Query: 28 EQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSDESLTRCIYSLRCIFEKIG 86 E++ + K + VL L VV +D +I +W+ N V +++LT ++ LR +G Sbjct: 34 ERITLQPKFVEVLAYLAHHYPRVVTRDALITDIWEGNTYVGEKALTNAVWHLRQQLGPLG 93 Query: 87 YDRCIETIYRKGYRF 101 IET+ + GYR Sbjct: 94 AGEVIETVRKTGYRL 108 >UniRef50_A3UMM4 Putative uncharacterized protein n=1 Tax=Vibrio splendidus 12B01 RepID=A3UMM4_VIBSP Length = 133 Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust. Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEK 84 QGN ++Y+ +L +L +SAG + + I+ + W N V ++LT IY LR +F + Sbjct: 23 QGN-KIYLRHHLFSMLCLLSKSAGQPIPRKDIVNACWGNETVPTQALTNVIYCLRNVFVR 81 Query: 85 IGYDRC-IETIYRKGY 99 + I TI R GY Sbjct: 82 LRASNIKIVTIPRYGY 97 >UniRef50_A6D0K2 Putative uncharacterized protein n=1 Tax=Vibrio shilonii AK1 RepID=A6D0K2_9VIBR Length = 233 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 33/68 (48%) Query: 39 VLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKG 98 +L L + GH + K +++ W IV SL I ++R +K+G C+ET+ G Sbjct: 33 ILEALCNAQGHPLTKQQLLDVGWPGKIVVANSLNVAIRNIRTALDKVGLVMCLETVPTIG 92 Query: 99 YRFSGQVF 106 +R V Sbjct: 93 FRLDPNVI 100 >UniRef50_C3NSU2 Transcriptional activator of cad operon n=39 Tax=Vibrio RepID=C3NSU2_VIBCJ Length = 519 Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust. Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 16/119 (13%) Query: 15 LTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRC 74 L + E+ + Q E P + + +L L E AG V ++ +I+ VW IV+D+ +T+ Sbjct: 13 LCIDENKLYRQDREVSAEP-RLINLLHFLAEHAGEVFGREELIQHVWDGAIVTDQVVTQS 71 Query: 75 IYSLRCIF-----EKIGYDRCIETIYRKGY-------RFSGQVFKTKINEDNTSDYSIA 121 I+ LR + E + Y + T+ ++GY R G + ++ E SD +A Sbjct: 72 IFELRKLLRDGREENLSY---VVTVPKRGYKLVANVQRLDGNPYVSRQEESTASDVCLA 127 >UniRef50_B2TAW9 Transcriptional regulator, winged helix family n=7 Tax=Burkholderia RepID=B2TAW9_BURPP Length = 1014 Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 10/91 (10%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESL 71 LE T+ DG E +++ + +L V++ +AG +V KD ++ +VW N +V + ++ Sbjct: 47 LEMRTVRRDG------EALHLGSRAFDILAVIVSAAGRLVTKDELMNAVWPNTVVEENNI 100 Query: 72 TRCIYSLRCIFEKIGYDR-CIETIYRKGYRF 101 + +LR I +G DR I T+ +GY+ Sbjct: 101 QVHLSALRKI---LGADRHLILTVPGRGYQL 128 >UniRef50_A5L2K7 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L2K7_9GAMM Length = 259 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 5/89 (5%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 +T +++ + E + I+LLE G +V K I+ +VWKN +V++ S+ R I LR F Sbjct: 12 ITYREKELLLNNNEFKLAILLLEKQGEMVEKSTILGTVWKNKVVTEGSIKRSISLLRKAF 71 Query: 83 EKIGYDRCIETIYRKGYRFSGQVFKTKIN 111 + + I GY S TK+N Sbjct: 72 YDLEANVEITAFRGVGYSIS-----TKLN 95 >UniRef50_A6FDL9 Putative uncharacterized protein n=1 Tax=Moritella sp. PE36 RepID=A6FDL9_9GAMM Length = 399 Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 36/68 (52%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCI 91 + E ++ +L G VV K+ + W + V+D+SLT+ IYSLR G D I Sbjct: 27 LSSSEKEIIDLLCSKNGAVVSKEALKVIGWPGLEVTDQSLTQAIYSLRKKLALCGADDVI 86 Query: 92 ETIYRKGY 99 T++ +GY Sbjct: 87 ATVFNQGY 94 >UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULB6_SINMW Length = 508 Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust. Identities = 66/244 (27%), Positives = 103/244 (42%), Gaps = 37/244 (15%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 Y F + + G+L + E V I + L +L LLE+ G +V K +IE W N IV D Sbjct: 6 YTFGDFVLDPRSGLLRRKGESVEIGSRGLALLQALLEARGGIVSKAELIERGWPNTIVED 65 Query: 69 ESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYR----FSGQVFKTKINEDNTSDYSIAIF 123 +LT I SLR R I TI R GYR ++G T ++ ++A+ Sbjct: 66 SNLTVQIASLRKALGPSPDGREWITTIPRAGYRLVTAYAGASSLT------STRPALAVL 119 Query: 124 PFTTSLNTLDPLILNQELV-QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFK-PD- 180 PF D +V +II+ + ++ + A N SF + + PD Sbjct: 120 PFINLDGGSDQGYFADGVVNEIIT--ALSRFRSFAVVARN--------GSFFNNLRFPDV 169 Query: 181 ----------YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNI 230 Y + G I + + + ++L+D L A H +EL + S F D I Sbjct: 170 RLVAKELGVGYMLQGNIRRPGSRLRISVQLVDGSGTHLWA--HSFDEELDDVSVF-QDRI 226 Query: 231 LQTV 234 ++V Sbjct: 227 AESV 230 >UniRef50_C7MMC5 Response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein n=2 Tax=Bacteria RepID=C7MMC5_CRYCD Length = 271 Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust. Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 2/96 (2%) Query: 8 SYHFLEGLTLTEDGI-LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW-KNII 65 ++H + G++L + ++ +Q + + EL +L +L+ +AG +V ++ I E +W + Sbjct: 131 AHHTVGGVSLDAECCRVSFAGKQADLTKNELRILSLLMRNAGKIVPRERIQEELWNSDEF 190 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRF 101 + D +LT + LR IG D I T GY F Sbjct: 191 IDDNTLTVNVSHLRHTLSTIGADDFIRTKRGIGYSF 226 >UniRef50_Q2SHD7 Probable transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SHD7_HAHCH Length = 487 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 8/68 (11%) Query: 39 VLIVLLESAGHVVLKDMIIESVW-KNIIVSDESLTRCIYSLRCIF----EKIGYDRCIET 93 VL+ L E+ G V ++ +I+ VW +N V +++L I+ LR F E Y IET Sbjct: 39 VLLALAENPGRTVSRETLIQKVWNENEYVGEQALNTAIWQLRKAFNDSSEAPEY---IET 95 Query: 94 IYRKGYRF 101 I +KGYR Sbjct: 96 IPKKGYRL 103 >UniRef50_A1S2M2 Putative transcriptional regulator, CadC n=1 Tax=Shewanella amazonensis SB2B RepID=A1S2M2_SHEAM Length = 297 Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust. Identities = 28/109 (25%), Positives = 55/109 (50%), Gaps = 10/109 (9%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESL 71 ++G +LT G Q +E + L + +L+ES + ++E +W N +VS S+ Sbjct: 12 VQGRSLTYKGCKLQCDE------RTLMLFQLLIESYPEPLETSALLEKLWPNTVVSSWSV 65 Query: 72 TRCIYSLRCIFEKIGYDRC-IETIYRKGYRFSGQV---FKTKINEDNTS 116 TR I R + + G + I+T++ +GYR ++ ++ + + NT Sbjct: 66 TRLISDARKLLKDAGMEESVIQTLHGRGYRLEPELAAKLQSHVQDSNTG 114 >UniRef50_B1QVC8 DNA-binding response regulator n=9 Tax=Bacteria RepID=B1QVC8_CLOBU Length = 223 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVSDESLTRCIYSL 78 + +++ ++++ + + E+ +L L+E+ G +V +++++E +WK + V D +LT I L Sbjct: 140 NATISREDKEIELTKNEIKILSCLIENKGSIVSREILMEYLWKSDYFVDDSTLTVNITRL 199 Query: 79 RCIFEKIGYDRCIETIYRKGY 99 R E IG IET GY Sbjct: 200 RRKLEGIGIKDAIETRRGLGY 220 >UniRef50_A7FEG6 Transcriptional regulator n=26 Tax=Yersinia RepID=A7FEG6_YERP3 Length = 348 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%) Query: 36 ELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR-CIFEKIGYDRCIETI 94 +L ++ VLLE AG ++ +D + VWK ++ + SL I++LR + ++ R I+TI Sbjct: 43 QLKLINVLLEHAGEILSRDELTNLVWKRRVIGNNSLPNAIHTLRVALGDENKQQRIIQTI 102 Query: 95 YRKGY 99 + GY Sbjct: 103 PKIGY 107 >UniRef50_B0G6G3 Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=B0G6G3_9FIRM Length = 224 Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust. Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW--KNIIVSDESLTRCIYSLRCIF 82 +G+E V + +KE +L+ L E+AG +V K+ I+E VW V D ++T I L+ Sbjct: 143 KGDEPVTLSKKEFSLLLYLWENAGQIVSKESILEHVWDIDGQFVDDNTVTVNISRLK--- 199 Query: 83 EKIGYDRCIETIYRKGYRFSGQVFK 107 K+G + I + GY ++G+V K Sbjct: 200 NKLGTEE-IANVRGLGYIWTGKVNK 223 >UniRef50_Q2BXY4 Putative uncharacterized protein n=2 Tax=Photobacterium RepID=Q2BXY4_9GAMM Length = 264 Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust. Identities = 22/73 (30%), Positives = 40/73 (54%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG 86 N + + + E + +L +A + V ++++++ W+ IV++ SLT I +LR F KIG Sbjct: 30 NAVLKVSRSETHIFALLANTANNTVHREILLKECWQGKIVTNNSLTVAIKNLRTSFSKIG 89 Query: 87 YDRCIETIYRKGY 99 I T + GY Sbjct: 90 EHNIITTEPKLGY 102 >UniRef50_A8GFV8 Transcriptional regulator, CadC n=1 Tax=Serratia proteamaculans 568 RepID=A8GFV8_SERP5 Length = 299 Score = 42.4 bits (98), Expect = 0.042, Method: Compositional matrix adjust. Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +LT E+ + KE +L +L+ + +V + IIE++WK SD ++ + I S+R Sbjct: 14 VLTPSREKFRLRWKEYQILSLLVARSPELVSRTEIIENIWKGTYCSDSTINQTIKSIR-- 71 Query: 82 FEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDN 114 +KIG I TI R GY+ + I+E++ Sbjct: 72 -QKIGDAEHTLIRTIPRLGYKVENKAVFHFISEED 105 >UniRef50_A4CDM3 Putative transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDM3_9GAMM Length = 678 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 55/102 (53%), Gaps = 8/102 (7%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 SY F + TL + L++ ++ I + L VL+ L+E+ + + +++W+ +VS Sbjct: 4 SYRFAD-FTLLVNQTLSKSGVELTIEPQVLTVLVYLIENNDRYISTQELHDALWQGRVVS 62 Query: 68 DESLTRCIYSLRCIFEKIGYD----RCIETIYRKGYRFSGQV 105 D ++ R + LR I +G D I+++ ++GYRF ++ Sbjct: 63 DTAIRRAVGKLRVI---LGDDAKEPNFIKSVSKRGYRFVAEL 101 >UniRef50_C6AVM9 Response regulator receiver protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM1325 RepID=C6AVM9_RHILS Length = 277 Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 2/68 (2%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCI 91 I + +L+VLL S G +V KD I+ VW +++V + +L + SLR G I Sbjct: 58 IGGRAFDLLMVLLRSNGRIVSKDEILNEVWPSMVVEECNLRFQVKSLRRALGSQG--NMI 115 Query: 92 ETIYRKGY 99 +TI R+GY Sbjct: 116 KTIVRRGY 123 >UniRef50_C7RA75 Transcriptional regulator, CadC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA75_KANKD Length = 741 Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust. Identities = 22/65 (33%), Positives = 35/65 (53%) Query: 37 LGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYR 96 + VL+ ++ VV + +IE+VW +V D S+ R I LR I + I+TI + Sbjct: 33 MDVLVYFTQNPQKVVSRSELIEAVWSGRVVGDHSVYRIINKLRQILARDPSREYIKTIRK 92 Query: 97 KGYRF 101 KGY+ Sbjct: 93 KGYQL 97 >UniRef50_B1T3M3 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3M3_9BURK Length = 934 Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust. Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L +G+E I + +L +L+ G VV + E VW +V D +L I +LR + Sbjct: 23 LERGDEIAEIGNRAFDILSLLVHRPGEVVSQKEFQEKVWPGSVVGDVNLRVQITALRKLL 82 Query: 83 -EKIGYDRCIETIYRKGYRFSGQVFKTKIN 111 E I +I +GY F G V T +N Sbjct: 83 SEDAASSHGIRSITGRGYCFVGPVTYTTLN 112 >UniRef50_Q1Z9C2 Putative uncharacterized protein n=2 Tax=Photobacterium profundum RepID=Q1Z9C2_PHOPR Length = 254 Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 2/88 (2%) Query: 39 VLIVLLESAGH--VVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYR 96 +LIV L S+ H + ++ ++E W +V+ SLT I ++R F IG D I T + Sbjct: 41 ILIVALLSSNHGVTICREHLLECCWPGKVVTHSSLTVAIKNIRNAFAVIGEDNIIVTEPK 100 Query: 97 KGYRFSGQVFKTKINEDNTSDYSIAIFP 124 KGY Q ++ S I P Sbjct: 101 KGYSIRLQENDAPLHAPKLSSNGIGPLP 128 >UniRef50_A5L7Z6 Putative uncharacterized protein n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5L7Z6_9GAMM Length = 294 Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust. Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 17/124 (13%) Query: 35 KELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRC-IET 93 K VL+ L G V KD + W IVSD+SLT I +LR + IG + + T Sbjct: 36 KPFRVLLYLHNHNGRCVSKDELFSECWNGAIVSDQSLTNTISTLRKSLKTIGIKKTKLTT 95 Query: 94 IYRKGY---RFSGQ-----------VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQ 139 + + GY + S + ++I ED+T + AI T+ ++ +I NQ Sbjct: 96 VSKAGYLLEKISNEELPEPHLPTETSLTSEIQEDDT--IAAAIDGATSEVSVPVEVIDNQ 153 Query: 140 ELVQ 143 EL Sbjct: 154 ELAN 157 >UniRef50_B9T7I6 Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9T7I6_RICCO Length = 426 Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIG 86 E+V + + VL+ L+E AG +V + + W+ + + +L I +LR F G Sbjct: 37 GERVPLGEPAYNVLVALVEKAGEIVDRQTLTARAWRTPYIEESNLRAAIAALRRAFSATG 96 Query: 87 YDRC-IETIYRKGYRFSGQV 105 R I+TI R+GYRF+ V Sbjct: 97 CGRSYIDTIPRRGYRFTETV 116 >UniRef50_D1RR55 Transcriptional regulator, CadC n=1 Tax=Serratia odorifera 4Rx13 RepID=D1RR55_SEROD Length = 301 Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust. Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 5/81 (6%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCI 81 +LT E+ + KE +L +L+ + +V + IIE++WK SD ++ + I S+R Sbjct: 14 VLTPSREKFRLRWKEYQILSLLVARSPELVSRTEIIENIWKGTYCSDSTINQTIKSIR-- 71 Query: 82 FEKIG--YDRCIETIYRKGYR 100 +KIG I TI R GY+ Sbjct: 72 -QKIGDVEHTLIRTIPRLGYK 91 >UniRef50_B8CPS7 Two-component response regulator, putative n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CPS7_SHEPW Length = 225 Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust. Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 3/91 (3%) Query: 12 LEGLTLTEDGILT--QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 + GLT+ + L QG +QV + ++ +L +LL+ +VV + M+ +++W+ + + Sbjct: 134 IAGLTIDHNQSLVNYQG-KQVRLLSLQMHILTILLKHYPNVVSRQMLEQAIWEGSPPNSD 192 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYR 100 L IY LR E I T+Y KGY+ Sbjct: 193 PLRTHIYRLRATLEVAFQKTVIRTVYAKGYQ 223 >UniRef50_Q5QWN9 N-terminal winged-HTH domain fused to TolB-like domain n=1 Tax=Idiomarina loihiensis RepID=Q5QWN9_IDILO Length = 665 Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust. Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCI 91 + K + VL+VL + G+VV ++ + VW N + S S+ R I LR + K + I Sbjct: 37 VEPKVMQVLLVLAANNGNVVSQEALYAEVWPNSVFSPGSIRRVITILRKVLSKDNQE-LI 95 Query: 92 ETIYRKGYRFSGQV 105 +T +KGY + ++ Sbjct: 96 KTFPKKGYSLNAKI 109 >UniRef50_A8MLN3 Two component transcriptional regulator, winged helix family n=2 Tax=Clostridiaceae RepID=A8MLN3_ALKOO Length = 231 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L + NE + + KE ++ +E+ G V K+ + E++W N I+ D ++ I+ LR Sbjct: 150 LYKNNEFIELSSKENLLIKFFMENPGQVFTKEQLYENIWNNSIIDDNAIMVYIHQLRKKL 209 Query: 83 E-KIGYDRCIETIYRKGYRF 101 E + + I T++ GY+F Sbjct: 210 EDNVKSPKHIVTVWGIGYKF 229 >UniRef50_A3UR88 Putative transcriptional activator ToxR n=3 Tax=Vibrionales RepID=A3UR88_VIBSP Length = 280 Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust. Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 1/68 (1%) Query: 35 KELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGY-DRCIET 93 +E VL +LL+ + +V K II W + + D SL +CI LR F K+G + I T Sbjct: 23 RETRVLELLLKKSPEIVRKQDIISFAWGSEFIGDTSLAKCISLLRQGFVKLGIKETPIVT 82 Query: 94 IYRKGYRF 101 + + GYR Sbjct: 83 VPKVGYRL 90 >UniRef50_C1SND3 Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SND3_9BACT Length = 224 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 22/83 (26%), Positives = 47/83 (56%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 E GILT+ N ++ +P + +L +L+E++ ++V K + ++W + ++L +Y+ Sbjct: 137 VEQGILTRNNIELQLPPVCMHILRILMEASPNLVSKSELEYAIWGHTPPETDALKAHLYT 196 Query: 78 LRCIFEKIGYDRCIETIYRKGYR 100 LR I +K + T+ +GY+ Sbjct: 197 LRNIIDKPFSKNMLVTVRGQGYK 219 >UniRef50_A8DJW5 Transcriptional regulatory protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJW5_9BACT Length = 242 Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust. Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 3/77 (3%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEK 84 QG E + + +KE +L +L +S G V+ ++ +++ VW I E+ T ++ +R + +K Sbjct: 149 QGQE-INLTRKEFALLKLLAQSKGRVLTREYLLDRVW-GIDYDGETRTLDVH-IRRVRQK 205 Query: 85 IGYDRCIETIYRKGYRF 101 +G D IET GYRF Sbjct: 206 LGIDGYIETAVGIGYRF 222 >UniRef50_A8F5U3 Two component transcriptional regulator, winged helix family n=1 Tax=Thermotoga lettingae TMO RepID=A8F5U3_THELT Length = 228 Score = 41.2 bits (95), Expect = 0.093, Method: Compositional matrix adjust. Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKN-IIVSDESLTRCIYSLRCIFEKIGYDRC 90 + ++E +L + L + G V ++ I+E VW+N I+ + I LR + GYDR Sbjct: 155 MSKREFALLELFLRNPGIVFSREEIMEKVWENEKIIKSNVIDVYILYLRNKLKPYGYDRY 214 Query: 91 IETIYRKGYRF 101 I+T+ GYRF Sbjct: 215 IQTVPGYGYRF 225 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust. Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 1/116 (0%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 S+HF + T+ +T V + K +++ L+E+ +V +D + E +W V Sbjct: 1 MSFHFNDVEIDTKQYRITCAGLTVSVEPKVFDIIVYLIENRNRLVSRDELFEKIWDARAV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 SD +L+ I S R G + I+T+ +GY+F +V + + ++ + S A Sbjct: 61 SDTTLSNHIKSARKALGDDGEQQHTIKTVRGRGYQFIAEVSVSALTDEPIAASSSA 116 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichi... 595 e-168 UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Esche... 450 e-125 UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonel... 429 e-118 UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=P... 392 e-107 UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 361 3e-98 UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax... 338 2e-91 UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leg... 331 3e-89 UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax... 307 4e-82 UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax... 295 3e-78 UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Ta... 283 7e-75 UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curviba... 260 6e-68 UniRef50_B7RJ24 Putative regulatory protein, possibly two-compon... 242 2e-62 UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 T... 226 1e-57 UniRef50_A6GR68 Transcriptional regulatory protein-like protein ... 218 2e-55 UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax... 211 6e-53 UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_S... 210 1e-52 UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobiu... 198 4e-49 UniRef50_Q2KD09 Probable two-component response regulator protei... 189 2e-46 UniRef50_Q2C702 Putative uncharacterized protein n=1 Tax=Photoba... 138 3e-31 UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanel... 130 9e-29 UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein ... 128 4e-28 UniRef50_B7LR88 Putative uncharacterized protein n=1 Tax=Escheri... 126 1e-27 UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID... 123 2e-26 UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrh... 120 1e-25 UniRef50_A5VGJ6 Transcriptional regulator, CadC n=1 Tax=Sphingom... 120 1e-25 UniRef50_UPI0001904B06 probable two-component response regulator... 120 1e-25 UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=... 119 2e-25 UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vi... 118 3e-25 UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanel... 117 6e-25 UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobact... 117 1e-24 UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseud... 115 3e-24 UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured mar... 115 4e-24 UniRef50_B5WFU1 Transcriptional regulator, winged helix family n... 111 4e-23 UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regul... 111 5e-23 UniRef50_B2T985 Transcriptional regulator, winged helix family n... 111 6e-23 UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobact... 111 8e-23 UniRef50_A5P8P2 Transcription activator ToxR n=1 Tax=Erythrobact... 111 8e-23 UniRef50_Q2Y9M2 Transcriptional regulator, putative ATPase, wing... 110 1e-22 UniRef50_Q12S47 Transcriptional regulatory protein-like protein ... 110 1e-22 UniRef50_Q12IY1 Transcriptional regulatory protein-like protein ... 109 2e-22 UniRef50_D0XWC9 Transcriptional regulator, winged helix family n... 108 4e-22 UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanel... 108 5e-22 UniRef50_B1ZTA9 Transcriptional regulator, CadC n=1 Tax=Opitutus... 107 6e-22 UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, ... 107 7e-22 UniRef50_D1TLZ3 Transcriptional regulator n=3 Tax=Burkholderia R... 107 1e-21 UniRef50_B4RU42 Transcriptional regulator n=2 Tax=Alteromonas ma... 106 2e-21 UniRef50_A2SGK5 ATPase-like protein n=1 Tax=Methylibium petrolei... 106 3e-21 UniRef50_C5D0W4 Transcriptional regulator, CadC n=1 Tax=Variovor... 105 3e-21 UniRef50_B8JG07 Transcriptional regulator, CadC n=3 Tax=Anaeromy... 105 4e-21 UniRef50_D2TZ50 Type III secretion transcriptional regulator Hil... 102 3e-20 UniRef50_A4CCM5 N-terminal winged-HTH domain fused to TolB-like ... 101 7e-20 UniRef50_Q12K29 Transcriptional regulatory protein-like protein ... 101 8e-20 UniRef50_B4CVJ4 Transcriptional regulator, CadC n=1 Tax=Chthonio... 101 8e-20 UniRef50_C7R8I4 Transcriptional regulator, CadC n=1 Tax=Kangiell... 100 1e-19 UniRef50_D0I6A9 Putative transcriptional activator ToxR n=1 Tax=... 100 1e-19 UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis a... 99 2e-19 UniRef50_A6XSQ7 ToxR2 n=9 Tax=Vibrio RepID=A6XSQ7_VIBCH 99 3e-19 UniRef50_A3W8K2 Putative uncharacterized protein n=1 Tax=Roseova... 98 5e-19 UniRef50_Q2C4S0 Putative uncharacterized protein n=1 Tax=Photoba... 98 7e-19 UniRef50_C2HYC0 Transcriptional activator ToxR n=1 Tax=Vibrio ch... 98 9e-19 UniRef50_A6AKR5 Transcriptional regulatory protein, C n=3 Tax=Vi... 96 2e-18 Sequences not found previously or not previously below threshold: UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum... 244 6e-63 UniRef50_B5ZPU5 Transcriptional regulator domain protein n=11 Ta... 231 5e-59 UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax... 215 3e-54 UniRef50_C8SQ16 Transcriptional regulator domain protein n=1 Tax... 204 5e-51 UniRef50_A0NYE8 Putative regulatory protein, possibly two-compon... 203 1e-50 UniRef50_A1TS46 Transcriptional regulator domain protein n=2 Tax... 196 2e-48 UniRef50_Q28KX4 Transcriptional regulatory protein-like protein ... 196 2e-48 UniRef50_Q022A1 Transcriptional regulator domain protein n=1 Tax... 193 1e-47 UniRef50_B1Y588 Transcriptional regulator domain protein n=1 Tax... 186 1e-45 UniRef50_UPI0001903BD8 transcriptional regulator domain-containi... 185 4e-45 UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=... 183 1e-44 UniRef50_Q98EW6 Adenylate cyclase; Cya3 n=3 Tax=Rhizobiales RepI... 174 7e-42 UniRef50_Q28L26 Transcriptional regulatory protein-like protein ... 171 3e-41 UniRef50_A9GYL5 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 169 1e-40 UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, ... 169 2e-40 UniRef50_Q89CY1 Bll7664 protein n=1 Tax=Bradyrhizobium japonicum... 166 1e-39 UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidat... 161 7e-38 UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobac... 159 2e-37 UniRef50_A6UAU6 Tetratricopeptide TPR_2 repeat protein n=3 Tax=R... 157 7e-37 UniRef50_C3KQE3 Probable adenylate class-3/4/guanylyl cyclase n=... 155 3e-36 UniRef50_Q98LH2 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 151 4e-35 UniRef50_A3W697 Transcriptional regulatory protein-like n=3 Tax=... 149 1e-34 UniRef50_D0DB83 Transcriptional regulator domain protein n=1 Tax... 149 2e-34 UniRef50_Q89G05 Bll6543 protein n=1 Tax=Bradyrhizobium japonicum... 148 3e-34 UniRef50_Q1MES5 Putative adenylate cyclase n=4 Tax=Rhizobium Rep... 148 3e-34 UniRef50_D0CP82 Transcriptional regulator domain protein n=4 Tax... 148 4e-34 UniRef50_Q9Z3Q0 Putative adenylate cyclase 3 n=1 Tax=Sinorhizobi... 148 5e-34 UniRef50_A6UDI5 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 ... 146 2e-33 UniRef50_B6B5A4 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 146 2e-33 UniRef50_UPI0001907507 adenylate/guanylate cyclase n=4 Tax=Rhizo... 145 3e-33 UniRef50_A8TLG8 Putative uncharacterized protein n=1 Tax=alpha p... 142 2e-32 UniRef50_D0CVN3 Adenylate cyclase protein n=1 Tax=Silicibacter l... 142 3e-32 UniRef50_A9E7U9 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 141 6e-32 UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultu... 139 3e-31 UniRef50_A5PAK2 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 138 3e-31 UniRef50_C3KN58 Probable adenylate class-3/4/guanylyl cyclase n=... 138 4e-31 UniRef50_B5ZU37 Adenylate/guanylate cyclase with TPR repeats n=8... 138 5e-31 UniRef50_B5JPL6 Tetratricopeptide repeat domain protein n=1 Tax=... 138 5e-31 UniRef50_B9NM62 Adenylate cyclase Cya3 n=1 Tax=Rhodobacteraceae ... 137 9e-31 UniRef50_B5ZNG5 Adenylate/guanylate cyclase with TPR repeats n=1... 135 3e-30 UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 135 4e-30 UniRef50_C3ME30 Adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 R... 134 7e-30 UniRef50_A0LHH5 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 133 1e-29 UniRef50_A6UCV6 Adenylyl cyclase class-3/4/guanylyl cyclase n=15... 133 2e-29 UniRef50_A1B7Q0 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 132 2e-29 UniRef50_Q7NE08 Glr4072 protein n=1 Tax=Gloeobacter violaceus Re... 132 3e-29 UniRef50_Q89G09 Blr6539 protein n=1 Tax=Bradyrhizobium japonicum... 132 3e-29 UniRef50_A8UFP6 Putative adenylate/guanylate cyclase n=1 Tax=Fla... 132 3e-29 UniRef50_Q98LH3 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 132 3e-29 UniRef50_B4RFP5 Adenylate cyclase n=1 Tax=Phenylobacterium zucin... 131 5e-29 UniRef50_Q5LMB3 Adenylate/guanylate cyclase n=1 Tax=Ruegeria pom... 130 1e-28 UniRef50_C6B2R4 Adenylate/guanylate cyclase with TPR repeats n=3... 129 3e-28 UniRef50_A1ZY11 Adenylate cyclase; Cya3 n=1 Tax=Microscilla mari... 128 4e-28 UniRef50_A4A7B5 Adenylyl cyclase class-3 family n=2 Tax=unclassi... 128 4e-28 UniRef50_A8TWN7 Adenylate cyclase cya3 n=4 Tax=Alphaproteobacter... 128 5e-28 UniRef50_B7RJ20 Adenylate cyclase Cya3 n=2 Tax=Proteobacteria Re... 127 6e-28 UniRef50_Q6W140 Probable adenylate class-3/4/guanylyl cyclase n=... 127 8e-28 UniRef50_Q1IP04 Serine/threonine protein kinase with TPR repeats... 127 9e-28 UniRef50_C8SMN4 TPR repeat-containing protein n=1 Tax=Mesorhizob... 127 1e-27 UniRef50_B0UEE6 Tetratricopeptide TPR_2 repeat protein n=1 Tax=M... 126 1e-27 UniRef50_C3MIJ5 Adenylate cyclase 3 n=7 Tax=Rhizobium RepID=C3MI... 126 1e-27 UniRef50_A6UKN0 Adenylyl cyclase class-3/4/guanylyl cyclase n=6 ... 126 1e-27 UniRef50_Q01U02 TPR repeat-containing protein n=2 Tax=Candidatus... 126 2e-27 UniRef50_Q1YFU6 Putative adenylate cyclase n=1 Tax=Aurantimonas ... 126 2e-27 UniRef50_Q2SFI0 FOG: TPR repeat n=1 Tax=Hahella chejuensis KCTC ... 126 2e-27 UniRef50_Q0BZ36 TPR domain protein n=1 Tax=Hyphomonas neptunium ... 125 3e-27 UniRef50_Q021X4 Serine/threonine protein kinase with TPR repeats... 125 3e-27 UniRef50_Q1IQW3 Serine/threonine protein kinase with TPR repeats... 125 4e-27 UniRef50_A3JWJ0 Putative regulator protein n=1 Tax=Rhodobacteral... 125 4e-27 UniRef50_Q02AP4 Serine/threonine protein kinase n=1 Tax=Candidat... 123 1e-26 UniRef50_C3KMT2 Probable adenylate class-3/4/guanylyl cyclase n=... 123 1e-26 UniRef50_Q89CK6 Blr7791 protein n=2 Tax=Bradyrhizobium japonicum... 123 1e-26 UniRef50_A7HAK8 Protein kinase n=1 Tax=Anaeromyxobacter sp. Fw10... 121 4e-26 UniRef50_B8KJR3 TPR repeat-containing protein n=1 Tax=gamma prot... 121 6e-26 UniRef50_B5JIE4 Bacterial transcriptional activator domain famil... 121 7e-26 UniRef50_Q89CQ9 Blr7737 protein n=5 Tax=Bradyrhizobium RepID=Q89... 121 8e-26 UniRef50_B7RXI6 Tetratricopeptide repeat domain protein n=1 Tax=... 120 1e-25 UniRef50_B6B7E9 Adenylate cyclase Cya3 n=1 Tax=Rhodobacterales b... 120 1e-25 UniRef50_A6UG63 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 ... 119 2e-25 UniRef50_B2JV68 Tetratricopeptide TPR_4 n=1 Tax=Burkholderia phy... 119 3e-25 UniRef50_Q13CI3 TPR repeat n=5 Tax=Rhodopseudomonas palustris Re... 119 3e-25 UniRef50_A9DT30 Adenylate cyclase cya3 n=1 Tax=Oceanibulbus indo... 118 3e-25 UniRef50_Q124D4 Integral membrane protein-like n=1 Tax=Polaromon... 118 4e-25 UniRef50_B5JPL3 Tetratricopeptide repeat domain protein n=2 Tax=... 118 4e-25 UniRef50_D2LHL5 Putative adenylate/guanylate cyclase n=1 Tax=Rho... 117 7e-25 UniRef50_Q1IRP3 Serine/threonine protein kinase n=1 Tax=Candidat... 117 8e-25 UniRef50_Q89ET6 Blr6986 protein n=1 Tax=Bradyrhizobium japonicum... 117 8e-25 UniRef50_B5JJC9 Tetratricopeptide repeat domain protein n=1 Tax=... 117 9e-25 UniRef50_B1M705 Adenylate/guanylate cyclase with TPR repeats n=8... 117 9e-25 UniRef50_Q0ASW3 TPR repeat-containing protein n=1 Tax=Maricaulis... 116 1e-24 UniRef50_Q01NG0 Serine/threonine protein kinase n=1 Tax=Candidat... 116 2e-24 UniRef50_B1ZFX8 Transcriptional regulator domain protein n=1 Tax... 115 3e-24 UniRef50_B5JQ34 Bacterial transcriptional activator domain famil... 115 3e-24 UniRef50_A3I071 Adenylate cyclase protein n=1 Tax=Algoriphagus s... 115 5e-24 UniRef50_A4ABU3 Adenylate/guanylate cyclase protein n=1 Tax=Cong... 114 8e-24 UniRef50_C3KQQ8 Probable adenylate class-3/4/guanylyl cyclase n=... 113 1e-23 UniRef50_C6W151 TPR repeat-containing protein n=1 Tax=Dyadobacte... 113 1e-23 UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes Re... 113 2e-23 UniRef50_A5CFV3 Putative adenylate/guanylate cyclase protein n=1... 113 2e-23 UniRef50_A1ZHF0 Adenylate cyclase; Cya3, putative n=1 Tax=Micros... 113 2e-23 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 112 4e-23 UniRef50_Q1ISU5 Serine/threonine protein kinase with TPR repeats... 111 6e-23 UniRef50_Q0ASW0 Integral membrane protein-like protein n=1 Tax=M... 111 8e-23 UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium... 111 8e-23 UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax... 111 9e-23 UniRef50_C3KKQ7 Putative adenylate cyclase n=1 Tax=Rhizobium sp.... 110 1e-22 UniRef50_A4APJ2 Probable serine/threonine kinase n=2 Tax=unclass... 110 1e-22 UniRef50_Q1IJ33 Serine/threonine protein kinase with TPR repeats... 110 1e-22 UniRef50_B8KPN2 TPR repeat-containing protein n=1 Tax=gamma prot... 109 2e-22 UniRef50_C6AV68 Adenylate/guanylate cyclase with TPR repeats n=4... 109 2e-22 UniRef50_A4F1M4 TPR repeat protein n=1 Tax=Roseobacter sp. SK209... 109 2e-22 UniRef50_A7HB42 Transcriptional regulator, SARP family n=1 Tax=A... 109 2e-22 UniRef50_B8IB76 Adenylate/guanylate cyclase n=2 Tax=Methylobacte... 109 3e-22 UniRef50_B9BNS9 Transcriptional regulator n=2 Tax=Burkholderia m... 109 3e-22 UniRef50_C5SN08 Transcriptional regulator, CadC n=1 Tax=Asticcac... 108 4e-22 UniRef50_A3W4X2 Adenylate/guanylate cyclase n=2 Tax=Roseovarius ... 108 4e-22 UniRef50_A6D228 Putative transmembrane adenylate cyclase n=1 Tax... 108 4e-22 UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobac... 107 8e-22 UniRef50_Q0HTC3 Lysine decarboxylase transcriptional regulator, ... 107 1e-21 UniRef50_A1TAL1 Transcriptional regulator, CadC n=7 Tax=Mycobact... 107 1e-21 UniRef50_Q1MK13 Putative transcriptional regulator n=1 Tax=Rhizo... 107 1e-21 UniRef50_Q7NN29 Serine/threonine kinase n=1 Tax=Gloeobacter viol... 107 1e-21 UniRef50_A3D2S0 Transcriptional regulator, CadC n=3 Tax=Shewanel... 106 1e-21 UniRef50_Q1ITM5 Serine/threonine protein kinase with TPR repeats... 106 2e-21 UniRef50_P23890 Transcriptional activator cadC n=99 Tax=Enteroba... 106 2e-21 UniRef50_B6EKJ8 Putative transcriptional regulator n=1 Tax=Aliiv... 106 2e-21 UniRef50_A3WEA4 Adenylate cyclase n=1 Tax=Erythrobacter sp. NAP1... 105 4e-21 UniRef50_Q5E341 DNA-binding transcriptional activator CadC n=9 T... 105 4e-21 UniRef50_A3SM14 Adenylate/guanylate cyclase/hydrolase, alpha/bet... 105 5e-21 UniRef50_Q89CU8 Bll7697 protein n=1 Tax=Bradyrhizobium japonicum... 104 5e-21 UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acid... 104 6e-21 UniRef50_A4A737 Membrane protein n=3 Tax=unclassified Gammaprote... 104 7e-21 UniRef50_UPI0001AF360D LuxR family transcriptional regulator n=3... 104 7e-21 UniRef50_B1YN09 Transcriptional regulator, winged helix family n... 104 8e-21 UniRef50_B1KAJ7 Transcriptional regulator, winged helix family n... 104 8e-21 UniRef50_C3KKU6 Putative transcriptional regulator n=1 Tax=Rhizo... 104 8e-21 UniRef50_Q89XL4 Transcriptional regulator n=1 Tax=Bradyrhizobium... 104 9e-21 UniRef50_C7RJ06 Transcriptional regulator, putative ATPase, wing... 104 9e-21 UniRef50_Q1MMK4 Putative transcriptional regulator n=1 Tax=Rhizo... 104 1e-20 UniRef50_B1T3M3 Transcriptional regulator, winged helix family n... 103 1e-20 UniRef50_B0SVQ0 Transcriptional regulator, winged helix family n... 103 1e-20 UniRef50_Q47YV7 Putative adenylate cyclase n=1 Tax=Colwellia psy... 102 2e-20 UniRef50_Q2NDU5 Putative adenylate cyclase protein n=1 Tax=Eryth... 102 2e-20 UniRef50_C7RA75 Transcriptional regulator, CadC n=1 Tax=Kangiell... 102 3e-20 UniRef50_A0NQZ6 Putative uncharacterized protein n=1 Tax=Labrenz... 102 3e-20 UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum... 102 3e-20 UniRef50_Q98JC9 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 102 4e-20 UniRef50_B8ESY3 Transcriptional regulator, winged helix family n... 102 4e-20 UniRef50_Q47YD8 Putative transcriptional regulator n=1 Tax=Colwe... 101 5e-20 UniRef50_B1J1E8 Two component transcriptional regulator, LuxR fa... 101 5e-20 UniRef50_A8I3P3 Putative uncharacterized protein n=1 Tax=Azorhiz... 101 6e-20 UniRef50_Q987X1 Transcriptional regulator n=1 Tax=Mesorhizobium ... 101 7e-20 UniRef50_Q48IP6 Transcriptional regulator, LuxR family n=1 Tax=P... 101 9e-20 UniRef50_Q12RS3 Transcriptional regulatory protein-like protein ... 101 9e-20 UniRef50_B2TAW9 Transcriptional regulator, winged helix family n... 101 9e-20 UniRef50_C3NSU2 Transcriptional activator of cad operon n=39 Tax... 101 9e-20 UniRef50_A5ED47 Transcriptional regulator n=1 Tax=Bradyrhizobium... 100 1e-19 UniRef50_Q7NLM6 Serine/threonine protein kinase n=1 Tax=Gloeobac... 100 1e-19 UniRef50_Q01Y07 Serine/threonine protein kinase n=1 Tax=Candidat... 100 1e-19 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 100 1e-19 UniRef50_Q022M7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=C... 100 1e-19 UniRef50_D1TNN3 Transcriptional regulator, winged helix family n... 100 2e-19 UniRef50_B1KFP5 Transcriptional regulator, CadC n=1 Tax=Shewanel... 100 2e-19 UniRef50_A9DZ64 Serine/threonine protein kinase n=1 Tax=Kordia a... 100 2e-19 UniRef50_C9Q7M5 Transcriptional regulator CadC n=2 Tax=Vibrio Re... 100 2e-19 UniRef50_A5KUS7 DNA-binding transcriptional activator n=1 Tax=Vi... 99 3e-19 UniRef50_Q3KE15 Putative transcriptional regulator n=3 Tax=Prote... 99 3e-19 UniRef50_C6XRJ0 Transcriptional regulator, CadC n=1 Tax=Hirschia... 99 3e-19 UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, ... 99 3e-19 UniRef50_A6CY17 DNA-binding transcriptional activator n=2 Tax=Vi... 99 3e-19 UniRef50_Q3KEV6 Putative transcriptional regulator n=1 Tax=Pseud... 99 4e-19 UniRef50_C6AYW7 Transcriptional regulator, winged helix family n... 99 4e-19 UniRef50_Q087B1 Lysine decarboxylase transcriptional regulator, ... 99 4e-19 UniRef50_A3UTR1 Transcriptional regulator CadC n=1 Tax=Vibrio sp... 98 5e-19 UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, ... 98 6e-19 UniRef50_Q1YZ13 Transcriptional activator CadC n=1 Tax=Photobact... 98 8e-19 UniRef50_B1T3K6 Transcriptional regulator, winged helix family n... 98 8e-19 UniRef50_C5AMC0 Transcriptional regulator, winged helix family p... 98 8e-19 UniRef50_Q89GU0 Blr6255 protein n=1 Tax=Bradyrhizobium japonicum... 98 9e-19 UniRef50_A4CDM3 Putative transcriptional regulator n=1 Tax=Pseud... 98 1e-18 UniRef50_A4SQG5 Transcriptional activator CadC n=2 Tax=Aeromonas... 98 1e-18 UniRef50_B4CW77 Two component transcriptional regulator, winged ... 97 2e-18 UniRef50_B2JV05 Transcriptional regulator, winged helix family n... 97 2e-18 UniRef50_A6GH84 Serine/threonine protein kinase n=1 Tax=Plesiocy... 97 2e-18 UniRef50_B8CR40 Transcriptional activator CadC n=1 Tax=Shewanell... 97 2e-18 UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, ... 97 2e-18 UniRef50_C5D1G0 Transcriptional regulator, winged helix family n... 96 2e-18 UniRef50_Q6GZK0 Cad operon transcriptional activator (Fragment) ... 96 2e-18 UniRef50_A3VIF4 Adenylate/guanylate cyclase/hydrolase, alpha/bet... 96 2e-18 >UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichia RepID=YGEH_ECOLI Length = 458 Score = 595 bits (1533), Expect = e-168, Method: Composition-based stats. Identities = 458/458 (100%), Positives = 458/458 (100%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV Sbjct: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI Sbjct: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 Query: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD Sbjct: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS Sbjct: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL Sbjct: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL Sbjct: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 Query: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP Sbjct: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 Query: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR Sbjct: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 >UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Escherichia coli RepID=B7NQ98_ECO7I Length = 565 Score = 450 bits (1157), Expect = e-125, Method: Composition-based stats. Identities = 146/454 (32%), Positives = 240/454 (52%), Gaps = 20/454 (4%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +N + L +GIL N++ +IP KELGV+I+LL + G +V K+ II+ VW Sbjct: 7 KNNTQQYIFGDFVLKNNGILLFKNKEYHIPPKELGVIILLLNADGEIVSKEEIIDKVWSA 66 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 + SDESLTRCIY+LR + + + IET+Y +GYRF+ + NE S ++A+F Sbjct: 67 SVASDESLTRCIYALRKLLHENKQCKYIETVYGRGYRFTVPIVIVTDNEPVKSTTTLAVF 126 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 PF T +++ L L+ ELVQ +S GL P + TN +D + + F+++ P+Y++ Sbjct: 127 PFRTE-GSINVLKLHYELVQGLSKYAFCGLDILPASVTNEASDFSTIHQFINKIGPEYYI 185 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE-------LHNTSQFIIDNILQTVHK 236 G++ L+IELI A+ LI + + L +I+ I K Sbjct: 186 MGQVVHYGKNWRLFIELIHARTHKLIDHQSIDFNPDNPLSVLLSQVINILIEKIPNINFK 245 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + ++ D + G+ E+Y +TPES+ RA+ IF ++ Q T Sbjct: 246 SINTQQMPSLDSAV-------MYMNGRMEMYRYTPESLKRALVIF---RDCVSTQPQNTL 295 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 YC LAECH+SLAL G SE + A A+ ++ +I + + L ++GLI+GL + V Sbjct: 296 PYCCLAECHISLALLGISEQKQAITTAVTSIEKALEINPSNSQALGLLGLISGLKDEHSV 355 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 S++LF+QA + + +YYY++L+ F N + A I+KS+ LEP + ++K + Sbjct: 356 SNVLFKQAHLLKPNSPDVYYYQSLLCFLNGDLARAFNLIEKSIALEPNKMGISILKLII- 414 Query: 417 MYVPNPLKNNIKLYYK-ETESESHRVIIDNILKL 449 +Y +PL N I +++ + II +IL + Sbjct: 415 LYYTSPLDNAISFALNLNSQNTCNNPIITSILAM 448 >UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonella enterica RepID=HILA_SALTY Length = 553 Score = 429 bits (1102), Expect = e-118, Method: Composition-based stats. Identities = 121/442 (27%), Positives = 216/442 (48%), Gaps = 8/442 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 + L DG L + ++V IP KE VL++LLE+AG +V K+ +++ VW + V++E Sbjct: 14 FVFDDFILNMDGSLLRSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVNEE 73 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 SLTRCIY+LR I + R IET+Y +GYRF+ V + +++AI PF Sbjct: 74 SLTRCIYALRRILSEDKEHRYIETLYGQGYRFNRPVVVVSPPAPQPTTHTLAILPFQ-MQ 132 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + + L+ +V+ +S GL P+ T C + + +PDY+++G++ Sbjct: 133 DQVQSESLHYSIVKGLSQYAPFGLSVLPVTITKNCRSVKDILELMDQLRPDYYISGQMIP 192 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 + N + IE++ K L+ + + E H + + + I + + +R + Sbjct: 193 DGNDNIVQIEIVRVKGYHLLHQESIKLIE-HQPASLLQNKIANLLLRCIPGLRWDTKQIS 251 Query: 250 YKNHYLSDE-MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSL 308 N S L GK EL +TP S+ +A+ + + N S YC LAEC++S+ Sbjct: 252 ELNSIDSTMVYLRGKHELNQYTPYSLQQALKLLTQCVNMS---PNSIAPYCALAECYLSM 308 Query: 309 ALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHS 368 A G + + A KA E +++ + + L ++GLI + + V +LF+QA + S Sbjct: 309 AQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQANLLS 368 Query: 369 TDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIK 428 A + YY F ++EEA I++ L+L+P R A + K + Y + + I+ Sbjct: 369 PISADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTG-IDDAIR 427 Query: 429 LYYK-ETESESHRVIIDNILKL 449 L + ++ I+ ++ + Sbjct: 428 LGDELRSQHLQDNPILLSMQVM 449 >UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=Proteobacteria RepID=Q7NUQ7_CHRVO Length = 561 Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 127/447 (28%), Positives = 216/447 (48%), Gaps = 14/447 (3%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 L DG+L +Q+ +P KEL VL LLE+AG +V KD +++ VW + V+ Sbjct: 11 RQFVFGDFVLQFDGVLCHQEQQISVPPKELAVLTALLEAAGELVSKDALLDKVWPDGDVN 70 Query: 68 DESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +ESLTRCIY+LR I + +R I+T+Y KGYRFS V + ++AI PF T Sbjct: 71 EESLTRCIYALRRILLEDKSNRYIDTVYGKGYRFSRPVAVVSRPTASAQKCTMAILPFRT 130 Query: 128 SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 LD L L+ LVQ +S GL P T C D + + + +PDY++ G++ Sbjct: 131 D-GQLDSLELHAALVQCLSRYSPFGLVVMPATITRNCGDIADIIAMIDQLRPDYYLAGQV 189 Query: 188 NQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQD 247 Q L +EL+ A L+ + + + + + + + + +R Sbjct: 190 QQQGDSWLLRVELVRADGHQLVHHESIEIGPGEHIAA-LQTRLASLLPQRIPGLRW---H 245 Query: 248 QGYKNHYLSDE----MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 G + S + L G+ EL TP S+ RA+ +F + Q YC LAE Sbjct: 246 HGNGSQLDSLDMAITYLNGRHELQQHTPSSLKRALALF---LQCTSSQPGNALPYCSLAE 302 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQ 363 C+++LA G + E A A + +D + + + L ++ L++ L GQ ++ LFEQ Sbjct: 303 CYLALAQLGLFDQERALDGAQQAVDRAVALDAANPQALGLLALLSSLRGQQTIAEALFEQ 362 Query: 364 AKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPL 423 A++ + D ++YY A F +++I A+ +D L+ +P R A +++ + Y + L Sbjct: 363 ARMLAPDSIDIHYYHAWHLFLSDRIPLAQRSLDACLERDPSRIAASMLQLWLT-YCEHRL 421 Query: 424 KNNIKLYYKE-TESESHRVIIDNILKL 449 + L ++ + ++ ++L L Sbjct: 422 DEAVALGKRQLCQYGQDHPVLQSMLGL 448 >UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98JB4_RHILO Length = 541 Score = 361 bits (927), Expect = 3e-98, Method: Composition-based stats. Identities = 82/420 (19%), Positives = 160/420 (38%), Gaps = 26/420 (6%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + Y F + + L +GN + + + +L L+ + VV KD ++++VW+ Sbjct: 24 SNLPYLFEDFALDGDRRELRRGNSLIAVEPQVFDLLQYLIRNRERVVSKDDLVDAVWQGR 83 Query: 65 IVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNT-------- 115 IVSD +L + + R + G R + T R+G+RF G V + E Sbjct: 84 IVSDATLASRVNAARSALQDNGEQQRLVRTFPRRGFRFVGTVHEEAGAEATAPVEPAKPG 143 Query: 116 ----SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHI 168 + SIA+ PF D +V+ I +I L+ ++ + + Sbjct: 144 LGIPARPSIAVLPFVNLSGDPDQDYFADGMVEDIITGLSRIRWLFVIARNSSFTYKGRAV 203 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIID 228 Y + G + + + + +LID ++ + + + L + + Sbjct: 204 DMKQVGQELGVRYVLEGSVRKVGSRVRITGQLIDTEDGGHLWAERYDRE-LTDVFALQDE 262 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRL 284 + V E ++R A+ ++ + S D L ++Y F P+ R + + D+ Sbjct: 263 ITISVVAAIEPNLRRAEIERVKRQRPDSLDAYDLFLRALPDVYTFMPQGAARGLPLLDQ- 321 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 I+ + A H +L + G + E + KA + + D LA+ Sbjct: 322 --ALAIEPSYALVHGFAAWAHQTLFIRGGMQAEHSG-KASRHAHAAIEHGSGDAMALALA 378 Query: 345 GLITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 G GL K++ F QA S A +Y + + + A +++L+L P Sbjct: 379 GFTIGLVEHDRKLADEAFSQALSLSASCAFVYAFGCVPVAYGGDATRAIDWGEQALRLNP 438 >UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B0UQ98_METS4 Length = 510 Score = 338 bits (867), Expect = 2e-91, Method: Composition-based stats. Identities = 79/410 (19%), Positives = 154/410 (37%), Gaps = 24/410 (5%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F TE +L + V + + + VL L+ AG V K+ + W ++ V D Sbjct: 6 DFGPFRLDTEMKLLLRDGAPVALGPRAVAVLQALVARAGAPVSKEELFRVAWPDLAVEDS 65 Query: 70 SLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS----DYSIAIFP 124 +LT I +LR R IET+ R+GYR+ G V S+A+ P Sbjct: 66 NLTVQIAALRRALAGSEDGARWIETLPRRGYRYVGPVGAAPSMPPVMPRFPDRPSVAVLP 125 Query: 125 FTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAA-TNFCNDHISQNSFLSRFKPDY 181 + + I+ +I L+ ++ + I Y Sbjct: 126 LRNLSGDPAEDYFGDGMAEDITAGLSRIKWLFVTARSSGAVYRGREIDPCEAGRALGARY 185 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTVHKPER 239 + G + + A + + L++++ ++ + P++ + I +++ + E Sbjct: 186 LLLGSLRKETARIRVALRLVESEAGGVVWAEAYDRPLEGVFALQDDIAMSVVGAI---EP 242 Query: 240 SVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 ++R A+ ++ + S D +L + +++ P RA+ + R +++ Sbjct: 243 NLRQAEAERVRRLRPESLDAYDLVLRAQSDVFTGMPAESSRALGLLGR---ALELEPRYG 299 Query: 296 ECYCLLAECHMSLALH-GKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS-GQ 353 + A CH +L L G SE++ AA ++ + D L G + Sbjct: 300 LAHAFAAMCHHNLFLRAGLSEVDRAA--SIRHAEKAIAHGRDDALALTFAGFSLAMDAHD 357 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + FE A S A+ Y +VH E A +++L+L P Sbjct: 358 RRAGSAAFEAALAVSPSSATTYILGGVVHGWAGDAERAITWGERALRLSP 407 >UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MK68_RHIL3 Length = 522 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 91/405 (22%), Positives = 168/405 (41%), Gaps = 33/405 (8%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESL 71 LEG TL + + + + + VL L+++A +V K ++E+VW V+D+SL Sbjct: 34 LEGETLR-----LENGDAIALRPQAFAVLRHLVQNANRLVSKAELLEAVWGGAAVTDDSL 88 Query: 72 TRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNT 131 +CI+ +R Y + T+ R+GYR S + + +E SIA+ PF T Sbjct: 89 VQCIHEIRRALGDERYA-VLATVSRRGYRLSLE----RSDESALGGPSIAVLPFATMSGG 143 Query: 132 LDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRIN 188 LV+ I + KI GL+ ++ F + + + + Y + G + Sbjct: 144 EPNDYFADGLVEDIITNLSKIPGLFVIARNSSFGFRGEKADLRTIAAELRVRYLLQGSLR 203 Query: 189 QNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIID----NILQTVHKPERSVRLA 244 Q+ +Y +L+D + + H+ D + + D Q V E SVR A Sbjct: 204 QSGGRLRIYAQLVDGAS-----ATHVWADRFEGAATDVFDLQDRLTEQIVGSIEPSVRRA 258 Query: 245 KQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 + ++ ++ S D L + TP +A+ + R ++Q + Sbjct: 259 EIERAHRKRPESLDAYDLYLRALPHAHANTPAQTDKALQLLAR---SIELQPDYVAAHGY 315 Query: 301 LAECHMSLALH-GKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSGQAKVSH 358 A C+ L G + AA AL D I + D + ++I + L+ + Sbjct: 316 AAWCYEQRYLRNGLDPADKAA--ALSHADIALGINSDDPQAMSIGAFVRANLTRDYDAAV 373 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + ++A + + + + ALV H+E+ + A K+L+L P Sbjct: 374 EVLDRALAWNNNSTLAFGFSALVSAHSERHQRAVEHAHKALRLSP 418 >UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax=Rhizobiales RepID=B1M5U0_METRJ Length = 525 Score = 307 bits (787), Expect = 4e-82, Method: Composition-based stats. Identities = 83/427 (19%), Positives = 161/427 (37%), Gaps = 34/427 (7%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + L++ ++ + + +L VL+E VV +D ++E+VW IV Sbjct: 1 MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTK------INEDNTSD-- 117 S+ +L I + R G R I T+ RKG RF G V + I ++ ++ Sbjct: 61 SEATLGSRINAARTAIGDTGTGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPG 120 Query: 118 ---------YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCN 165 ++A+ PFT + + + I + ++ GL+ +T + Sbjct: 121 VTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITALSRVSGLFVIARNSTFTYRG 180 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQF 225 I Y V G + + + + +L+DA + ++ L + Sbjct: 181 AAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFD-GGLDDVFAL 239 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIF 281 + E +++LA+ + ++ D +L L DFT + A+ Sbjct: 240 QERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHL 299 Query: 282 DR--LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 D + + YC A+CH + E E AA A+ L + D + Sbjct: 300 DEALALDPGYAPAMAAAAYC-RAQCHFQ-GWIAQGEAERAA--AVRLAWGAVERAPGDAQ 355 Query: 340 ILAIMGL-ITGLSGQAK-VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 +L + + +S + + LF +A + + + A + + E R +++ Sbjct: 356 VLWMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIETMCGRAEAGRAMVER 415 Query: 398 SLQLEPR 404 +LQL PR Sbjct: 416 ALQLNPR 422 >UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B8ESP8_METSB Length = 522 Score = 295 bits (754), Expect = 3e-78, Method: Composition-based stats. Identities = 91/432 (21%), Positives = 156/432 (36%), Gaps = 47/432 (10%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T L + I + +L L+ES V K+ I+ VW ++ Sbjct: 1 MIYLFEDFELDTARVELRTNGVAIAIEPQVFALLCFLVESRDRVATKEEIVARVWNGRVI 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQV-------------FKTKINE 112 SD ++ I S R G R I TI+ G+RF V +T + Sbjct: 61 SDSAIASRIKSARRALGDDGGAQRLIRTIHGIGFRFVADVRLAATRIESIAPTAETAPDT 120 Query: 113 DN-----TSDYSIAIFPFTTSLNTLDPLI-----LNQELVQIISNKKIDGLYTYPMAAT- 161 D TS SIA+ PF L DP L +L+ +S ++ L+ ++ Sbjct: 121 DRSQAVETSRPSIAVLPFRL-LGAADPQFSIGDALPHDLITELS--RLRWLFVIARGSSF 177 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDEL 219 F + Y ++G + +++ + +EL DA++ ++ S + Sbjct: 178 RFRGAEPDVGRVRTALNVRYCLSGVVEIHHSAMIISVELSDAEDSGVVWSERFRTQASAV 237 Query: 220 HNTSQFIIDNI-----LQTVHKPERSVRLAKQDQ--GYKNHYLSDEMLAGKKELYDFTPE 272 H + I+ + LQ R RL ++ + ++L G +Y F Sbjct: 238 HEIREEIVRAVINALELQIPLNEARRARLKSPERLDAWSAYHL------GLHHMYRFNKA 291 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVS 331 A +F+R + ++ Y L+ H A ++ + AA A + Sbjct: 292 DNSVATALFER---AAAMEPGFARAYAGLSFTHFQSAFLSYADNVSEAANLAQRAAEQSL 348 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + VD MG L G S E+A + + A Y RA + Sbjct: 349 ERDPVDPFGNFTMGRAFWLCGDLDASLPWLERANALNPNYAQAKYSRAWAQALLGNAASS 408 Query: 392 RICIDKSLQLEP 403 R +D++L L P Sbjct: 409 RANVDEALALSP 420 >UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Tax=Proteobacteria RepID=A6UHF5_SINMW Length = 531 Score = 283 bits (725), Expect = 7e-75, Method: Composition-based stats. Identities = 78/434 (17%), Positives = 161/434 (37%), Gaps = 44/434 (10%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + + E LT + V + + +L+ L+ + VV KD ++++VW IV Sbjct: 1 MQFMFADYVLDRERRELTLRGQVVSVGPQVFDLLLHLVGTRDRVVSKDELLQAVWGGRIV 60 Query: 67 SDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTS--------- 116 S+ ++T I ++R G R + T+ RKG+RF G + E Sbjct: 61 SESTITSHINAVRKAIGDTGGEQRLVRTVARKGFRFVGDIRIADSAEARQPGGPGSAGHT 120 Query: 117 ---------------DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 SI + PF D +V+ I + +I L+ Sbjct: 121 SLGSKEPPPALALPDKPSITVLPFQNLSGDADQDYFADGVVEDIITALSRIRWLFVIARN 180 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--V 216 ++ + + Y + G + + + +LIDA + + + Sbjct: 181 SSFTYKGREVDLKEVGQELGVRYVLEGSVRKAGNRVRITGQLIDATAGTHLWAERFEGTL 240 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPE 272 D++ + ++++ + + A+ ++ + S D L G L++ T E Sbjct: 241 DDIFELQDRVAESVVGAI---APQLERAEIERAKRKPTGSLDAYDYYLRGMAHLHNGTRE 297 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG--KSELELAAQKALELLDYV 330 +I A+ +F + ++ Y A C+ L+G + A+ A L Sbjct: 298 AIEAALPLFYK---AIELDPDFASAYAGAAWCYFWRKLNGWMIHRAQEIAEGA-RLARLA 353 Query: 331 SDITTVDGKILAIMGLITG-LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 ++ D L G G L G L ++A++ + ++A ++ + + E Sbjct: 354 VELGRDDAVALTRSGHALGHLVGDLDGGIALIDRARLLNPNLAPAWFLGGFLRVFRGEPE 413 Query: 390 EARICIDKSLQLEP 403 A I+++ +L P Sbjct: 414 SAIEHIERAARLSP 427 >UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6H6_9BURK Length = 526 Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats. Identities = 76/418 (18%), Positives = 150/418 (35%), Gaps = 36/418 (8%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + + L + V + + VL VL++ AG +V K + + VW ++V + + Sbjct: 17 FGNFVLQRHERRLLCDGQTVMVGARAFDVLCVLVDHAGELVTKKKLFDLVWPGLVVEENN 76 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS-------------- 116 L + SLR I I T+ +GYRF+ ++ + Sbjct: 77 LQVHVSSLRRILGADA----IATVPGRGYRFTLRLAAVPSAVETAQASKGKGRASDQQAY 132 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSF 173 +IA+ PF + + L + I K L ++ + N S + Sbjct: 133 RRTIAVLPFVNLNADPEQEYFSDGLAEDIISHLTKSPWLLVVSRNSSFAYRNTKESNQAV 192 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 S + Y V G + + + + EL+D + ++ P+ ++ I I+ Sbjct: 193 GSALRARYLVLGSVRRAGTMLRMTAELVDTSTGETLWADRFDRPLSDMFAVQAEISGQIV 252 Query: 232 QTV-----HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 + H ER ++ H+ D ++ + + TPE + +A ++ R Sbjct: 253 SAIEPVYLHSEERVA--SEVPNQNMEHW--DLLMRARWHFWRTTPEHVMQAQSLLTR--- 305 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ-KALELLDYVSDITTVDGKILAIMG 345 +I+ + L++ HM+ +E AA +A L D +G Sbjct: 306 ALEIKPGDSASLSLMSFTHMAKLWGAWAEDPRAAVAEANRLALVAVRNDERDAFAHFTLG 365 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 +GQ + + E A A+ + + + EEA I +++ P Sbjct: 366 TALSCAGQMQAAIAELECALGLYPQAAAAAGELGRLLVFSGRTEEAEEFILQAVDASP 423 >UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q89V41_BRAJA Length = 516 Score = 244 bits (622), Expect = 6e-63, Method: Composition-based stats. Identities = 74/424 (17%), Positives = 143/424 (33%), Gaps = 24/424 (5%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + + LT V + + +L+ L+ VV KD +I +W + IV Sbjct: 1 MRFCFENNVLDGDLRELTCAGVAVPLQPQVFDLLLYLVAQRARVVSKDDLISQIWSDRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFK------------TKINED 113 SD +L I + R G R I+TI RKG+RF G+V + Sbjct: 61 SDSALNSRINAARKALGDDGATQRLIKTIPRKGFRFIGEVREDVAVTLAPAEPAAAPART 120 Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQ 170 +IA+ F + + + I + K ++ + + Sbjct: 121 VADRPAIAVLAFENMSGDPEQDYFGDGISEDILTALSKQRWFMVIARNSSFIYKGRAVHI 180 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNI 230 Y V G + + + + +L DA + + + + + N + Sbjct: 181 RQIAEELGVRYIVEGSVRKADKRVRITAQLNDAASGSHLWAERYDRELV-NVFAVQDEIT 239 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 V E + A+ + ++ S D ++ + T + A + +R Sbjct: 240 NAIVAAIEPQIHAAENFRSHRKPPASLDAWDLLMRALSHYWRVTRQDHEAAQALLER--- 296 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 I + +LA HM A G EL A A D +G Sbjct: 297 AIGIDPNYGQALSVLAANHMFGAHLGWVELARVAPIAEAAALAAVRCDHEDAWAHTGLGS 356 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 + + + + FEQA + + + Y AL + + +++ ++++L PR Sbjct: 357 VYFSTRRLADALSEFEQALALNPNFSLAQGYYALALSYAGRSKDSFEAAQRAIRLSPRDP 416 Query: 407 KAVV 410 + Sbjct: 417 SLAI 420 >UniRef50_B7RJ24 Putative regulatory protein, possibly two-component response regulator n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJ24_9RHOB Length = 521 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 71/420 (16%), Positives = 143/420 (34%), Gaps = 27/420 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + GIL +G I + +L +L+ +V KD I+E+VW IV Sbjct: 1 MRYRFDHFTLDIDRGILLEGGRDAPIEPRAFKLLALLVTHHDRIVTKDEIVENVWDGRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKT--------------KIN 111 SD ++ I + R + G + + TI +G RF G + + Sbjct: 61 SDAAIATVIKTTRKVLSDDGVGQKYLRTIRGRGVRFVGTLMPSLAAEARKPETDQAQPAP 120 Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQEL-VQIIS-NKKIDGLYTYPMAAT-NFCNDHI 168 S +IAI PF + + + ++IS ++ L +T F Sbjct: 121 VQTASRPTIAILPFQMVGYSETFSAIADAIPAELISCLSRLRWLAVVSRGSTFRFRETEP 180 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIID 228 + + Y +TG + +V + +EL D ++ ++ S + + ++ D Sbjct: 181 DLATIHAALGAKYCLTGLVEIFGSVIAVSVELSDTRSQDVVWSERFS-GTISDINETRND 239 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYLSDE----MLAGKKELYDFTPESIYRAMTIFDRL 284 + + E V L + + + + G + +Y F A + F++ Sbjct: 240 IVTHVISALELHVPLNEAKRARLRPPENLDAWSIYHLGLQHMYRFNKTDNLIAASHFEK- 298 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAI 343 + + + + A S + A + ++ +D Sbjct: 299 --ATILDPEFARAHAARSFTSFQSAFLKYSTDAAEEASNTRRFAEKAVELDPIDPFANFT 356 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 +G L + ++A S + A +Y + EA + ++ L P Sbjct: 357 LGRAHWLISDPEAGMPWIDRAIELSPNFAQGFYAHGWGDVMAGRGVEALQQLQTAISLSP 416 >UniRef50_B5ZPU5 Transcriptional regulator domain protein n=11 Tax=Rhizobiales RepID=B5ZPU5_RHILW Length = 502 Score = 231 bits (588), Expect = 5e-59, Method: Composition-based stats. Identities = 66/407 (16%), Positives = 140/407 (34%), Gaps = 17/407 (4%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + G L + ++ V + + + +L L+ G ++ K ++++ W V Sbjct: 4 SRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAV 63 Query: 67 SDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQV----FKTKINEDNTSDYSIA 121 + +LT I LR + I T+ R GYRF+G + + SIA Sbjct: 64 EEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIA 123 Query: 122 IFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFK 178 + PF + + L + + ++ GL+ + ++ + Sbjct: 124 VLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAGELG 183 Query: 179 PDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHK 236 Y + G + + +LIDA + + + +D++ + + I++ + Sbjct: 184 VRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEALLG 243 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 +R + D + + L D +P++ A + R + E Sbjct: 244 ---RLRAPPPRNRPSSLEAYDLCVRAR-RLMDDSPQAAEEAHLMLTR---AISLDPDYAE 296 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 Y LA H +H E ALEL + D ++ + Sbjct: 297 AYRWLAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAE 356 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + F +A + A + + + ++ E I K+ +L P Sbjct: 357 ADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNP 403 >UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6C4_HAMD5 Length = 275 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 5/262 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 + TLT D +L+ N+ V +P KE +L++LL+SAG ++ KD +E VW N VS+E Sbjct: 11 YIFGEFTLTADALLSYKNKIVKVPPKEFSILMLLLDSAGVLISKDDFLEKVWPNEFVSEE 70 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 SLTRCIY LR + + +R I+T+Y KGYRF V T+ S S+A+ PF Sbjct: 71 SLTRCIYVLRRLLHENKNNRYIDTVYGKGYRFIQPV--TQSERFAESQCSLAVLPFKLP- 127 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 D L+++ L+Q +S GL P N C D+ FL + KP+Y+++ Sbjct: 128 QHFDSLMIHDFLIQSLSKYTYSGLNVLPSTLINSCKDYDGIMCFLEKMKPNYYLSAHTIN 187 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPV-DELHNTSQFIIDNILQTVHKPERSVRLAKQDQ 248 + +++L IELI + ++ + D +H T + I + + + S+ Sbjct: 188 DGDISSLRIELIRTHDHSIVHREKFDLCDNVHLTCLNLQGVIHKLLARHIPSLNKKSSSV 247 Query: 249 GYKNHYLSDE-MLAGKKELYDF 269 + + L + Y Sbjct: 248 PVMKEFDTTFAYLNAHHKFYSH 269 >UniRef50_A6GR68 Transcriptional regulatory protein-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GR68_9BURK Length = 510 Score = 218 bits (556), Expect = 2e-55, Method: Composition-based stats. Identities = 67/420 (15%), Positives = 161/420 (38%), Gaps = 17/420 (4%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 SY F + +L + E V + + L+ L+ + V+ KD ++++VW ++ Sbjct: 2 DSSYFFDHFELRANERLLLREGEAVNLGSRTFDFLMCLVTNHTRVLSKDELLQTVWPGMV 61 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKIN--EDNTSDYSIAIF 123 V + +LT +LR + + I T+ +GY+FS V +T+++ +IA+ Sbjct: 62 VEENNLTVQTSALRKLLGS----QAISTVTGRGYQFSLPVRRTEVSSKPTVQKHSTIAVL 117 Query: 124 PFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPD 180 PF D L + L++ I ++ G A+T F + ++ + + Sbjct: 118 PFKVLGEQTDLRFLAEGLLEDVIALLARVPGFLVISQASTQIFDHSSVALPEIAEQLQVQ 177 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKP-ER 239 + V G I + + + + ++L +A+ ++ ++ +S + + I + + E Sbjct: 178 FVVLGSIRRVDEIIRVNVQLAEAQTGQVLWNSRFECSP--ASSADLQEEIARGLLSELEP 235 Query: 240 SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD---RLQNKSDIQTLKTE 296 ++ A+ Q + + + A E + + + D +L+N +I + Sbjct: 236 ALTKAEIAQIRRQRPNNLDAWAHYHEATGALAQLGWSEAGLRDARHQLENSIEIDSNFGL 295 Query: 297 CYCLLA-ECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAK 355 + LA +S + + L + ++ + +++ G GQ + Sbjct: 296 AHAHLALLTALSRNIGLLPHSDAVLASGLTAANTAIELDGGNSEVMGYAGCALCDLGQTR 355 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 I + A + A ++E + +++ P+ R+ + Sbjct: 356 QGLITLKAALQLNPSNAQAQVAHGAALVLMNELEGGIAQMRLGMRISPKDRRLGFW-LWI 414 >UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULB6_SINMW Length = 508 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 77/410 (18%), Positives = 144/410 (35%), Gaps = 17/410 (4%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 Y F + + G+L + E V I + L +L LLE+ G +V K +IE W N IV D Sbjct: 6 YTFGDFVLDPRSGLLRRKGESVEIGSRGLALLQALLEARGGIVSKAELIERGWPNTIVED 65 Query: 69 ESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +LT I SLR R I TI R GYR + ++ ++A+ PF Sbjct: 66 SNLTVQIASLRKALGPSPDGREWITTIPRAGYRLVT--AYAGASSLTSTRPALAVLPFIN 123 Query: 128 SLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCN-DHISQNSFLSRFKPDYFVT 184 D +V I + + + F N Y + Sbjct: 124 LDGGSDQGYFADGVVNEIITALSRFRSFAVVARNGSFFNNLRFPDVRLVAKELGVGYMLQ 183 Query: 185 GRINQNNAVNTLYIELIDA-KNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRL 243 G I + + + ++L+D S +D++ I ++++ V E ++ Sbjct: 184 GNIRRPGSRLRISVQLVDGSGTHLWAHSFDEELDDVSVFQDRIAESVVSLV---EPHIQA 240 Query: 244 AKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 A+ ++ ++ S D L ++ + A + R L Sbjct: 241 AEIERSRRDRPGSTASYDIYLQALAKISTESELDNAEAYALLMRGIEAEPDNALLLAHAA 300 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL-ITGLSGQAKVSH 358 E ++ E + + + L + D ++A G+ + + + Sbjct: 301 WALEHRHTMGWPSLGEDD--VGECVALARRGLEHAAGDAMVMAHCGVALLQTAKDYDWAL 358 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 + + A + + + L H H ++EA ++ +L P R A Sbjct: 359 AVLQSAAEANPNNLMVVVRAGLAHLHCGSLDEALTHFQRASRLSPGDRGA 408 >UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMB1_9RHIZ Length = 501 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 70/406 (17%), Positives = 150/406 (36%), Gaps = 26/406 (6%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + F G L++ ++ ++ K +L L G VV K ++++VW + V++ Sbjct: 10 FQFGGFTLDLGKGTLSRADQPAFLRPKAYALLTHLACHIGRVVPKSELMDTVWPGVFVTE 69 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +SLT+ + +R + + + T+ ++GY V +T+ ++ + +A+ F Sbjct: 70 DSLTQSVREIRKVLGEE----RVRTVSKRGYML---VPETEAVPESGAQPIVAVLRFRN- 121 Query: 129 LNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHIS--------QNSFLSRFKPD 180 + DP NQE+V + I+GL + N S + SR D Sbjct: 122 -DGADPA--NQEIVDGFAEDIINGLARFGTVTVLARNSSFSFASHSPAEWPAIRSRIGAD 178 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPE 238 Y V G + + + LIDA N + + + L Q I++ I+ + Sbjct: 179 YLVEGSVRRQAERIIAAVSLIDAANSAQLWGDRYQAEAAGLFTIQQDIVEQIVGRLVVKV 238 Query: 239 RSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 + L + + S + +L G + D + A + Sbjct: 239 SNAGLTRASRRPVTSLASYELVLRGVALMRDPAQSDLKAAAA---LFEAAISKDPSYGLA 295 Query: 298 YCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 + LA ++ + G + + A KA +L + ++ I L+ + + Sbjct: 296 HTYLALSYVLNSEFGPTSSSVLA-KARDLAERGIALSPDQATAHRIQSLVRLSMRDHQAA 354 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + A + A + + EA + ++++++P Sbjct: 355 EHHLQIALELNPGDAECIEQMGHLLTMRGRPLEALSWLARAIRIDP 400 >UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_SODGL Length = 293 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 2/229 (0%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + L +L ++++ I KELGVL +LLESAG +V K II VW V + Sbjct: 34 QYAFGDFLLNSSRVLFHKDKRLSISPKELGVLSLLLESAGELVTKAQIIHEVWYGGNVGE 93 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN-TSDYSIAIFPFTT 127 ESLTRCIY LR I ++ R I+T+Y KGYRF+ V + + +A+FPF Sbjct: 94 ESLTRCIYVLRRILQEEKDRRYIDTVYGKGYRFTLPVTRILPARPGMPARCVLAVFPFRL 153 Query: 128 SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 + +D + L +VQ ++ GL+ P + T C + L + +PDY++TG Sbjct: 154 A-EDIDTVDLQDAIVQQLAPCSPLGLHVLPTSLTMNCRTTDAMLLLLDKIRPDYYLTGYE 212 Query: 188 NQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHK 236 +L IEL+ A++ ++ + + L F+ + Sbjct: 213 LNLGGAPSLRIELMRAEDHLVLLRERVAKEHLAGDGSFLPQLKPMILGA 261 >UniRef50_C8SQ16 Transcriptional regulator domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SQ16_9RHIZ Length = 496 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 53/404 (13%), Positives = 142/404 (35%), Gaps = 24/404 (5%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + +L V + + +L LL+ V+ K + ++ W ++V + Sbjct: 4 EFGNFRLKRTERLLLGPTGPVELSARSFDILAALLDRPDEVIGKAELFDAAWPGLVVEEN 63 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN-TSDYSIAIFPFTTS 128 +L + +LR + I T++ +GY+++G + + + SIA+ PF Sbjct: 64 TLQVHVSALRKLLP----VEMIVTVHGRGYKYAGPKPSAATDPASMQARPSIAVLPFDNM 119 Query: 129 LNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTG 185 + + + + I + K ++ R Y V G Sbjct: 120 SGDPEQDYFSDGITEDIIAQLGKFREFLVIGRNSSFRVRGKKGDLAEVAMRLGVQYVVEG 179 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNILQTVHKPERSVRL 243 + + + + ++L DA ++ + H +D++ I I + + R+ + Sbjct: 180 SVRKIGSRIRVSVQLTDAASMAHVWGEHYDRQLDDIFAIQDDITQMIAARLARQARTA-I 238 Query: 244 AKQDQGYKNHYLS--DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 A + + + +S + L + + E+ +A + +L Sbjct: 239 ASRARAHPTGNVSAYENYLRALQLVSQL--ETAVQAAPFLG---IAVKLDPDFAGALGML 293 Query: 302 AECHMSLAL--HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI 359 + + +++E+ + A + + + G + + + + Sbjct: 294 SFVETIKYFWSNDINDVEVGLRTAK----AALQLDSEEAYAHLANGFASMFLRRFREAET 349 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 ++A + + + Y AL+ + K + A ++++ + +P Sbjct: 350 SLDRAVSLNPNDPFILIYNALLLNYVGKYDAALRELEQARRRDP 393 >UniRef50_A0NYE8 Putative regulatory protein, possibly two-component response regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYE8_9RHOB Length = 556 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 92/430 (21%), Positives = 160/430 (37%), Gaps = 40/430 (9%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 Y F L +G E+V I + L +L++L+E+ +V KD +IE VW IVS+ Sbjct: 30 YTFDGFELDGARFELRRGGERVAIEPQVLSLLLLLVENRDRLVSKDELIEHVWDGRIVSE 89 Query: 69 ESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTK------------INEDNT 115 ++ I + R G + I TI+ KG+RF + T I E+ Sbjct: 90 TAVAARIKAARKAVGDKGSAQKVIRTIHGKGFRFIAETEVTSAQVTAHPRPSDLITEEQA 149 Query: 116 S-------------DYSIAIFPFTTSLNTLDPLILNQEL-VQIIS-NKKIDGLYTYPMAA 160 + SIA+ PF I+ L II+ ++ L+ + Sbjct: 150 APAIENLLKNALDGRPSIAVLPFQYFGEPGQHEIVADALPADIIADLSRLHWLFVIARGS 209 Query: 161 T-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD-- 217 + F + S + Y +TG + T+ + LID + I + H Sbjct: 210 SFRFRGPDVDPLSAGRQLGVCYGLTGTVECTGGSLTIGVSLIDMTSSGTIWAEHYRAGLT 269 Query: 218 ELHNTSQFIIDNILQ--TVHKPERSVRLA-KQDQGYKNHYLSDEMLAGKKELYDFTPESI 274 EL I +++ V P+ R+A ++ G + + + G +Y F + Sbjct: 270 ELQQLRPEIESHVVASLAVQIPQNEARIARRRAPGELDAWACFHL--GLDHMYRFNRQDN 327 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDI 333 RA +F + + + L+ H A S+ A ++A L + Sbjct: 328 ARAAALFTQ---SLERDPYFSSAMGGLSFTHFQSAFMRFSDDPAAEVEEARALAQQAVET 384 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D G + L G+ + + F++A S A Y R LV + +A + Sbjct: 385 DRFDPFAHFNAGRCSWLDGRLEDAIAWFDRATSLSPSFAQGVYTRGLVSVMAGQAAQADV 444 Query: 394 CIDKSLQLEP 403 + +L L P Sbjct: 445 DLALALDLSP 454 >UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZTP7_RHILW Length = 479 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 77/388 (19%), Positives = 145/388 (37%), Gaps = 22/388 (5%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEK 84 + V I K L +L L+ + G VV KD ++++VW +IV+++SLT+ I +R Sbjct: 2 RRGRDVEIGAKPLAMLTYLVRNEGRVVSKDELMQAVWPGVIVTEDSLTQAISQIRKA--- 58 Query: 85 IGYDRCIETIYRKGYRFS--GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELV 142 IG D I T++R+GY F V + +A+ PF D + Sbjct: 59 IGADGLIRTLFRRGYLFENKQSVANAMPEKAFVRALPLAVAPFRLIGPGSDAAWFAEAFS 118 Query: 143 QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELID 202 ++++ L Y + + + + D + G + + + + L + Sbjct: 119 TEVASR----LARYHDLEVTWLPEKAVPSPLRATLGFD--LNGMVQSVDGMMKVTAMLTE 172 Query: 203 AKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD--- 257 + ++ S + I + I+ + + +A + + D Sbjct: 173 MSSGRIVWSASWDGAIANALEIQSEIAEGIVNALAGHGVLLNVAAEHLHRRAAADRDAFE 232 Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 L G+ F E +A+ F R ++I L + + LA H LA G E Sbjct: 233 LYLRGRYHTNRFNREDAEKALHCFQR---ATEIDPLFSRAWLGLAWSHDELASFGVDMSE 289 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYY- 376 A AL ++ D + L +G + G GQ + + ++A A + Sbjct: 290 NDA-AALNSARRAVELDPFDAEALVALGEMLGNMGQMEAAEAALDRALGLGPSNADVLAM 348 Query: 377 YRALVHFHNEKIEEARICIDKSLQLEPR 404 + +IEE +K+ +L P Sbjct: 349 FSGWAPVF-GRIEEGIAAAEKARRLNPS 375 >UniRef50_A1TS46 Transcriptional regulator domain protein n=2 Tax=Acidovorax RepID=A1TS46_ACIAC Length = 531 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 75/415 (18%), Positives = 141/415 (33%), Gaps = 32/415 (7%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + F + + L V + + VL L+ AG +V K + VW ++V + Sbjct: 26 FAFDHFVLKVRERQLLSHGCPVALGARAFDVLCTLVHRAGTLVTKSELFRQVWPGMVVEE 85 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKIN---------EDNTSDYS 119 +L + +LR + +G DR I TI +GYRF G+V D ++ S Sbjct: 86 NNLQVHVSALRKL---VGADR-IVTIPGQGYRFVGRVAGPPEPGQEAARAPLPDASTGRS 141 Query: 120 IAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSR 176 IA+ PF + + L + + + + AT + + S S Sbjct: 142 IAVLPFGAAPDAAQ-RHFADGLAEDVIHRLSRSRWISVIARNATQRYGHPLPSNASIARE 200 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHK 236 Y V G+ + + +LIDA + + + + + +I + Sbjct: 201 LGVRYLVAGQARFHAGRVRVTADLIDAPRNETVWTESY--ERPADDAARAQSSISAAIAS 258 Query: 237 PERSVRLAKQDQGYKNHYLSD-----EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 V L +++ + D ++ + + + + +A + + Sbjct: 259 AVEPVHLRREECLHSAVPPQDGEYWPLLMRARWHFWRSGRDHLRQAE---HYARRALQAR 315 Query: 292 TLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGL 350 LLA HM+ G+S A +A L D +G Sbjct: 316 PDDASSLALLAFVHMARVWAGRSACVRVDASEARRLALRAVGSDDTDAFAHFTLGTALSF 375 Query: 351 SGQAKVSHILFEQAKIHS--TDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 SG V+ EQA S A+ A + + + +EA ++ + P Sbjct: 376 SGHFAVAMS--EQALALSICPRFAAATGELARLLAFSGRTDEADDHARQACEASP 428 >UniRef50_Q28KX4 Transcriptional regulatory protein-like protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KX4_JANSC Length = 515 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 61/389 (15%), Positives = 121/389 (31%), Gaps = 24/389 (6%) Query: 30 VYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDR 89 V + + +L VL VV +D I+++VW + IV D +L + +LR + Sbjct: 25 VPLGARAFDLLEVLHTHRDRVVSRDEIMQAVWPDTIVGDNNLNVQVGNLRRLLGADA--- 81 Query: 90 CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--N 147 I T+ +G F+ + ++ S+ + PF D L V+ I+ Sbjct: 82 -IVTVPGRGLHFALEDWQPGPELALPDRPSVVVLPFEALGGDPDFDWLADGFVEDITTEL 140 Query: 148 KKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNL 206 + L+ + + + Y V G + + +LIDA N Sbjct: 141 SRFRDLFVVARNSAFTYRQMPRDLRAVTRELGVRYVVEGSVRARADRVRVAAQLIDAANG 200 Query: 207 FLIASNHLPVDELHNTSQFIIDNILQTVHKP-ERSVRLAKQDQGYKNHYLSDEMLAGKKE 265 + + + D + + + + + A+ D+ D G + Sbjct: 201 GQVWAENFDSDMSDHFET--QARVARAIATCLSPQIDRAEADRIRVLAPE-DLTAHGLAQ 257 Query: 266 LY---------DFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL 316 + P RA + + L +A H+ HG +E Sbjct: 258 RAWAVISSGEMAYDPGLRDRAEDLARQALALDANSALAWRVRAWVAWWHV---YHGTTES 314 Query: 317 ELAAQKA-LELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 A +E I D + + + + + QA + + A Sbjct: 315 VPGTLAAGIEAATRAIAIDKTDHQARRLRAQLHFMKQDVASALPELRQAHNMNPNCAITL 374 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPR 404 + N + + + L+ PR Sbjct: 375 CWLGFYEAVNGRADIGVPLAEAGLRRSPR 403 >UniRef50_Q022A1 Transcriptional regulator domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022A1_SOLUE Length = 605 Score = 193 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 72/442 (16%), Positives = 146/442 (33%), Gaps = 73/442 (16%) Query: 30 VYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE-KIGYD 88 V + K + VL++L+E G VV + ++ +VW + V + +L+ I LR Sbjct: 2 VALEPKAVEVLLILVEKRGEVVARQDLMSAVWPDTFVEESNLSSNISILRRQLGTPPDGG 61 Query: 89 RCIETIYRKGYRFS--------------GQVFKTKINEDNTSD----------------- 117 I+TI ++GYRF +V + E T+ Sbjct: 62 DYIQTIPKRGYRFVAAVNQAGSELEAATAEVSEIVSAEATTTVRVRKLTIRPRVILTSAA 121 Query: 118 ----------------------------YSIAIFPFTTSLNTLDPLILNQELVQIISNK- 148 +IA+ P + + ++ Sbjct: 122 GLLVVVLPLLYLGLWHGRLPGFAAEPHIGAIAVLPLENLSGDPAEEYFADGMTEALTADM 181 Query: 149 -KIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNL 206 +I L A+ + R + V+G + ++ + LI A Sbjct: 182 AQIGALRVIARASVMQYKGTKQPLAQIAERLHVEAVVSGAVLRSGQRVRITAALIRAATG 241 Query: 207 FLIAS--NHLPVDELHNTSQFIIDNI---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLA 261 + + + ++ + + I +Q + +RLA+ + Y D L Sbjct: 242 QQLWARTYERSLGDVLDLQNEVARAIAAEVQAKLTAQEQIRLARSRPVKADAY--DAYLK 299 Query: 262 GKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ 321 G+ FT + +++ F+R + Y LA+ SL G + E Sbjct: 300 GRYYYNQFTVDGFSKSIEHFER---AIKLDPNYASAYAGLADALASLEQIGAARSEDVHP 356 Query: 322 KALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALV 381 +ALE + + + A M + + + ++A + A + Y + + Sbjct: 357 RALEAANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAIELNPGFALAHLYYSNM 416 Query: 382 HFHNEKIEEARICIDKSLQLEP 403 H + EE+ ++L+L+P Sbjct: 417 LRHLGRREESIAEARRALELDP 438 >UniRef50_Q2KD09 Probable two-component response regulator protein n=3 Tax=Rhizobium etli RepID=Q2KD09_RHIEC Length = 510 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 76/408 (18%), Positives = 142/408 (34%), Gaps = 20/408 (4%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F E+G L + + V I + +L VLL + G VV K ++++VW + V + + Sbjct: 8 FGHFEFSAENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSKSALMDAVWPGLAVEESN 67 Query: 71 LTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINED------NTSDYSIAIF 123 L+ I +LR + I T+ R GYRFSG+V D S IA+ Sbjct: 68 LSVQIAALRKLLGPASDGSEWIATVPRVGYRFSGRVESACDGTDGEWHAQAGSKLGIAVL 127 Query: 124 PFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPD 180 PF + L + II+ + L A+ N + + Sbjct: 128 PFENPGGDAEKQYLADGIADNLIIALTRFRWLRVASRGASFKDRNGSRDPRAVGLALGVN 187 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNILQTVHKPE 238 + V G I + + L +A + S H L + E+ I + I V Sbjct: 188 FLVDGAIRYTGDRIRISVHLAEATKGATVWSEHYDLQLAEIFAVQDAIAERIAAAVEPEL 247 Query: 239 RSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR--LQNKSDIQTLKTE 296 N D + G F + + + R + ++ + E Sbjct: 248 LLRHGLAVAPHTGNITAWDLVRQG-----TFNFHKVSKPTHLLARRFFREAVELDPMLPE 302 Query: 297 CYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAK 355 A + L +G ++ A Q+ L + + + +++ +G+A Sbjct: 303 AQIWRARVNAGLIAYGWTDDPAADGQEGLTAALRAIYLDARNPYSHYALAIVSAYTGRAD 362 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + E++ + A + + + AR + + L+L P Sbjct: 363 QAILAAERSIELGSSFALGHLVLGMARLFSGDAAGARRPLSRGLELNP 410 >UniRef50_B1Y588 Transcriptional regulator domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y588_LEPCP Length = 543 Score = 186 bits (472), Expect = 1e-45, Method: Composition-based stats. Identities = 60/436 (13%), Positives = 126/436 (28%), Gaps = 43/436 (9%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y E ++ + E V + + VL+ L+ VV K+ ++E VW ++V Sbjct: 3 HRYTTGEFEVRPDERRVLLRGEPVPLGARAFDVLMCLIAQRERVVTKNELLEQVWPGMVV 62 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS---------- 116 + +LT + +LR +F + + TI +GYRF + +T Sbjct: 63 EENNLTVHVSALRKVFGA----QAVATIPGRGYRFVMALDETTGAPAVAPVPAPAPASVV 118 Query: 117 ------------DYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT- 161 SIA+ P +L + L + I + L+ ++ Sbjct: 119 GADGPTGLTLPDRPSIAVLPLDNLSGDAQQDLLIEGLSEDVITELSRFRSLFVIARNSSF 178 Query: 162 NFCN---DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPV 216 +F + Y + G + + + ++L+DA + + + V Sbjct: 179 SFRGLAHGERDVRAIARELGVRYVLEGSLRRAGDRVRVAVQLVDAVSATQLWAEKYDRAV 238 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIY 275 D+L + + I+ + + K + + + E Sbjct: 239 DDLFALQEELTRAIVGAIAPQIEAGEFQKIRSARGRDLNAYTLAMRARDTARRADREGDA 298 Query: 276 RAMT-IFDRLQNKSDIQTLKTECYCLLAECHMSLALHG--KSELELAAQKALELLDYVSD 332 +I +A G S ++ A ++ Sbjct: 299 TTRDEALRLAHEAVEIDPGCGVALATIAFVQWQQIWAGSAASPVDAAVAGLAAARRAIAL 358 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE-- 390 + L L + Q ++A + + A Sbjct: 359 DGSDHHAHLWKAMLQL-FTHQHAAGLADLQRAHELNPNDALTLSLLGQYLAAEADSAADA 417 Query: 391 --ARICIDKSLQLEPR 404 + +L+L PR Sbjct: 418 ATGVRHVLDALRLSPR 433 >UniRef50_UPI0001903BD8 transcriptional regulator domain-containing protein n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001903BD8 Length = 272 Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 94/268 (35%), Gaps = 14/268 (5%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + F L G L + + V + +L +LLE+ G VV K ++E W + Sbjct: 2 GSSTLSFAPFLYDPRTGSLWREGKPVATGPRPAALLGLLLEAEGRVVTKADLMERAWPGL 61 Query: 65 IVSDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 V + +LT I +LR + + I T+ R GYR + + ++A+ Sbjct: 62 AVEEGNLTVQIAALRRLLGVRADGTDWIVTVPRVGYRL-----PRQDEAASAQPPTVAVL 116 Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPD 180 PF D +V I + + + + I ++ Sbjct: 117 PFVNLGGDADQDYFADGVVTDIITALARFRSFSVVSRNSAFVYKGRSIDIREVAAQLGVR 176 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 Y + G I + + + ++L+D + ++H D + F + E + Sbjct: 177 YVLEGSIRREGSQVRINVQLVDGVTAANLWADHFE-DGIGGMFAFQDHITERVASTVEPT 235 Query: 241 VRLAKQDQGYKNHYLS----DEMLAGKK 264 + +A+ + ++ S D L Sbjct: 236 IEVAEIQRSRRDRPNSLSVYDLYLRALA 263 >UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5N5_9RHOB Length = 813 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 74/427 (17%), Positives = 149/427 (34%), Gaps = 26/427 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T+ L+ + V + L LI ++ + G +V KDM+ E+ W + +V Sbjct: 1 MIYGFEQFTIDTDRFQLSGPDGLVEAEPQALEFLIHMIRNRGQLVTKDMLHETFWPDRVV 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKIN-------------- 111 SD +L+ + + R + G R I T Y +G+ F +V + K Sbjct: 61 SDAALSTLVRNARRLVGDSGEEQRIIATRYGRGFVFRAEVEERKGPEVVGEVMRDAEASA 120 Query: 112 -EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDH- 167 +I + PF T D L + + + + + + + Sbjct: 121 RPRVEGAPAIVVLPFEIVGETADAHGLGEGVTEEVMAALARTRWFPLVARNRVRTFLELP 180 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQF 225 Y V G + ++ L+++L D + I + L L Sbjct: 181 PETRHPFRELGATYLVEGGVFRDGDDIRLHLQLTDTEPALHIHVSRHDLSYKGLFRLLDE 240 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRL 284 + + T+ AK ++ + E + G+ + ++ A + F R Sbjct: 241 VSTIVTATIQPEILEAERAKAERVAPESRNAWQEFVLGQHLIAAPDSDANAAARSHFRR- 299 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKILAI 343 ++ + LA H+ + SE EL+ A + + D +I Sbjct: 300 --ALALEPGSGRIHAGLAMTHLWDYKYDWSESAELSLASAARDAERALTLAPDDSWAWSI 357 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + + + +A A Y ++ V ++ + EEA D+++QL P Sbjct: 358 LAICELSLRRFDAAVASAGKAIDVDPASAMAYGCQSWVLAYSGRYEEALTAFDRAMQLSP 417 Query: 404 RRRKAVV 410 R+ + Sbjct: 418 NDRRRGL 424 >UniRef50_Q98EW6 Adenylate cyclase; Cya3 n=3 Tax=Rhizobiales RepID=Q98EW6_RHILO Length = 581 Score = 174 bits (440), Expect = 7e-42, Method: Composition-based stats. Identities = 61/377 (16%), Positives = 119/377 (31%), Gaps = 27/377 (7%) Query: 95 YRKGYRFSGQVFKTKINEDNTSD-YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKID 151 + YR + + SIA+ PFT D LV+ I +++ Sbjct: 165 PVRAYRVETDASASVAAPPALPEKPSIAVLPFTNMSGDPDQEYFADGLVEDIITGLSRVN 224 Query: 152 GLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIA 210 + ++ + + Y + G I + + + +L+DA + + Sbjct: 225 SFFVIARNSSFTYKGRAVDLRQVGRELGVRYVLEGSIRRAGSRVRISGQLVDAISGHHVW 284 Query: 211 SNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL----SDEMLAGKKEL 266 ++ D L + V E S+RL + Q D L Sbjct: 285 ADRFEGD-LSDIFDLQDKVTESVVGAVEPSIRLQEIKQARMKPTDYISAYDLYLRALPRF 343 Query: 267 YDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH---MSLALHGKSELELAAQKA 323 Y T E + I L A +S H ++ +A + A Sbjct: 344 YSMTREGFADVRRL---TNEALSIDPGFNLAKGLGAYIRSLSVSQCWHEPDDVRVAVRMA 400 Query: 324 LELLDYVSDITTVDGKILAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVH 382 E+L D D L + S +++ E++ + + + A + V+ Sbjct: 401 REVLAEARD----DPTSLRFAAQVIAYSAKDYEMALGAIERSLLLNPNSAQGHTGSGWVN 456 Query: 383 FHNEKIEEARICIDKSLQLEP-------RRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 H+ + A ++++L P + ++ Y L+ Sbjct: 457 AHSSRPLVAIEHFHRAMRLSPVDPEKGIALSGIGMSYLMLERYEEALAWGERALHEMPNY 516 Query: 436 SESHRVIIDNILKLKQL 452 SHRV+I ++KL +L Sbjct: 517 GSSHRVVIMALVKLNRL 533 >UniRef50_Q28L26 Transcriptional regulatory protein-like protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L26_JANSC Length = 527 Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats. Identities = 70/430 (16%), Positives = 149/430 (34%), Gaps = 36/430 (8%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T+ L +G+E + + L LI L ++ G ++ KD + E W + +V Sbjct: 1 MIYAFEDFTIDTDRFQLARGDELIETEPQTLEFLIFLAQNQGQMLTKDTLHEVFWPDRVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA---- 121 SD +L+ + + R G R I T + +G+ F V + + S+A Sbjct: 61 SDAALSTLVRNARRAIGDSGEQQRVIATRHGRGFVFRADVREFSDPQPAAMPRSVAAAAP 120 Query: 122 -----------IFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCND-H 167 + PF T D L++ + + + + K + Sbjct: 121 SPRIAGAPALMVLPFEIVGETQDAAGLSEGVTEEVMAALSKSRWFPLIARNRVRTFQELS 180 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN--LFLIASNHLPVDELHNTSQF 225 F Y V G + ++ ++++L D + ++ + + L Sbjct: 181 PETRHPFVGFGASYIVEGGVFRDGDDIRVHLQLTDTEPALHIHLSRHDFKYEGLFKLFDE 240 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIF 281 I + T + + A+ + K + E + G+ L + A F Sbjct: 241 IATVVAATA---QPELIKAEHQKAEKTDPEARSAWQEFVLGQYLLAAPDKPANAAARAHF 297 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKI 340 +R ++ + LA H+ + S+ ++ + A + + D Sbjct: 298 ER---AMSLEPGSGRIHAGLAMTHLWDYWYDWSQNAGISLETAARDAERALTLAPDDSWA 354 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 +I+ + + V+ ++A A + A V + + +A D+++ Sbjct: 355 WSILAICKLSLRRYDVALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAAYDRAVA 414 Query: 401 L----EPRRR 406 L +PRR Sbjct: 415 LGGPSDPRRV 424 >UniRef50_A9GYL5 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Roseobacter litoralis Och 149 RepID=A9GYL5_9RHOB Length = 588 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 53/299 (17%), Positives = 107/299 (35%), Gaps = 15/299 (5%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQ 170 +S IA+ PF + +V+ ++ ++ L + F + + Sbjct: 192 PSSKPCIAVLPFANMSADPEQDYFADGIVEELTTGLARMRWLTVISRNSAFAFKDKAMDV 251 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNI 230 Y V G + + + ++ID ++ + L + + Sbjct: 252 RRIGRDLSVGYIVEGSVRKAANSVRISAKMIDTESGAHLWGEAF-TGRLDDIFDLQDEVT 310 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 V E S++ A+ D+ + + D L + + FT E+ A+ + D Sbjct: 311 AGIVAAVEPSLKQAEIDRAKRKRQENLSAYDLYLRALDQAHKFTQEARDSALKLLDE--- 367 Query: 287 KSDIQTLKTECYCLLAECHMSLA-LHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 I E + + A CH G + A +L + V++ T D L+ Sbjct: 368 AIKIDPDYAEAHGVAAYCHQQRYLWGGCDPQDRLA--SLHHAEAVAEGRTDDATPLSFAA 425 Query: 346 L-ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + ++ L Q +V+ + +A S + A R+LV K E+ + +SL+L P Sbjct: 426 MALSALDNQHEVAATMLARALDLSPNSALALICRSLVMTILGKPEKGAVDAAQSLRLSP 484 >UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISH8_ACIBL Length = 619 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 60/414 (14%), Positives = 135/414 (32%), Gaps = 25/414 (6%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVS-DE 69 E L + +V + +K + +L+ L+ +V ++ II +W+ ++ + + Sbjct: 38 AEFELDLGRYELRRSGSRVKLEKKPMELLMFLVSRREQMVTREEIIRKIWRTDLFIDAER 97 Query: 70 SLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQ--VFKTKINED-------NTSDYS 119 +L + +R R +ET+ GYRF G V + + + + S Sbjct: 98 NLNNIVRKIRTALGDDPDRPRFLETVVGVGYRFIGPMRVVEAQFPRAETLDIPIDETSRS 157 Query: 120 IAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCNDHISQNSFLSRF 177 IA+ P + D + ++ + K+ G+ P +AT + +S ++ Sbjct: 158 IAVLPLVMAGKANDDEGVGIGFADALAAQLGKLQGVVVLPSSATIHFSAAVSPKEVAAKL 217 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVH 235 + V G I L +E++DA + + S +D + + + + Sbjct: 218 ATRFVVHGAIRLQKGEWRLSVEMLDAHSGRVCFSKSFDTSLDRFAQVEGEVAREVARALK 277 Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 P + + + Y E + G K P + RA Sbjct: 278 LPLNAPQQRPRHSRNPLAYA--EFMRGYKLSGSGDPAEVARASQHLG---TAVARDPNFA 332 Query: 296 ECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG--- 352 + L+ ++ +KA ++ + L + Sbjct: 333 LAHATLSFV-FAVQHFESDPTSALLEKAEFHGSRALELDPELPEALVARAFLVWGPSKNF 391 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 Q + ++A ++ Y + H ++ A ++ P+R Sbjct: 392 QHLEAITDLKRALSLQKNLPHAYNRLGTILAHVGLLDHALEMFERGRPFHPKRA 445 >UniRef50_Q89CY1 Bll7664 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CY1_BRAJA Length = 580 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 109/307 (35%), Gaps = 13/307 (4%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-N 162 + + SIA+ PF + +V+ I + + L+ ++ Sbjct: 178 ERLSAAPPLPAKPSIAVLPFENMSGDPEQEYFADGMVEEITTALSRFKWLFVIARNSSFT 237 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNT 222 + ++ Y + G + + + +LIDA I ++ D L + Sbjct: 238 YKGKAVNVKQVGHELGVRYILEGSVRKAAGKVRIAGQLIDAITGTHIWADRFERD-LTDI 296 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAM 278 D L V + + + + + D L ++ Y T ES+ A+ Sbjct: 297 FALQDDVALAVVSAVQPKMLQTEIATAARRRPENLTAYDFFLRSMQQYYLTTRESLAEAI 356 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTVD 337 + R ++ + L +CH S G + E A++A+ L + D Sbjct: 357 KLAHR---ALELDPRFSSAAALAGDCHASNVALGYANNPEFDAKEAIRLARLALSLDDGD 413 Query: 338 GKILAIMGLITG-LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 L+ + +++ + G ++ + ++A + + + R V+ EEA + Sbjct: 414 PDTLSRVAVVSACVVGDSEAEIEMADRAVALNPNSWRTWNNRGWVYTMAGLPEEAIRSFE 473 Query: 397 KSLQLEP 403 +++++ P Sbjct: 474 RAIRMSP 480 >UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01WH4_SOLUE Length = 616 Score = 161 bits (406), Expect = 7e-38, Method: Composition-based stats. Identities = 64/414 (15%), Positives = 140/414 (33%), Gaps = 25/414 (6%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 Y F L + +L +G++ + +P K L++L+ + GH++ K +++++W + V + Sbjct: 26 YGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPDSFVEE 85 Query: 69 ESLTRCIYSLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTKINEDNTSDYS-------- 119 +L I +R D I+T+ + GYRF V T+D + Sbjct: 86 VNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLERQPAE 145 Query: 120 ----IAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAAT----NFCNDHISQN 171 PF L L + L + IS + GL + ++ F Sbjct: 146 RVVRFLALPFRMLLGDERIDFLGRSLPEAISAS-LAGLSCMTVRSSLLAAQFSESRPDPR 204 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDN 229 + D + G I + + EL+ A L+ S D + ++D Sbjct: 205 RIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGTLLFSYSCEAKRDNIFEIQDILVDK 264 Query: 230 ILQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I++ + + R + + + L + + E++ A ++ + Sbjct: 265 IVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLY---RECV 321 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 D + L C+ L G + + + A + + I Sbjct: 322 DEDPNYAPAWARLGRCYRFLEKFG-EDGPQSLELAQWAFHRAFALNPDLSIAHNLYTQIE 380 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 G A+ + + + + L+ ++E+ ++ +L+ Sbjct: 381 ADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLLDESVSAHHRARRLD 434 >UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobacter sp. SW2 RepID=C8S437_9RHOB Length = 515 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 76/424 (17%), Positives = 135/424 (31%), Gaps = 39/424 (9%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 F F E G L + V + +K +L + + AG V+ K+ ++ +VW + Sbjct: 4 GTFVVQFAEVTLDMGRGRLIGRDGDVALRRKSFVLLCYMTQHAGQVLTKERLMSAVWPEV 63 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQ--------VFKTKINEDNTS 116 VSD+SLT+C++ +R G T+ +GY T Sbjct: 64 TVSDDSLTQCVHDVRRALGGSGASEL-RTVQGRGYLLVLPNQGGNRPIAAPTNGMVPTQL 122 Query: 117 DY-SIAIFPFTTSLNTLDPLILNQELV--QIISNKKIDGLYTYPM-----AATNFCNDHI 168 S+A+ PF DP +L E + + N I L + F + Sbjct: 123 RPGSVAVLPF-----AYDPAVLPDERIWLDGVVNDVISQLVRLRSLDVIGRDSAFALRDV 177 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELH--NTSQFI 226 S Y + G + + + L ++L+ ++ ++ ++ L + Sbjct: 178 SGLQAGVTLGVAYVLAGSVFRADRDVVLRVDLVATRSQSIVWTDEFRTTGLEIAGLITVL 237 Query: 227 IDNILQTVHK----PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 D IL V ER++ A D G + E + RA F Sbjct: 238 TDRILSVVLNGIDWSERNLARAVPDHALTAW---QAYFRGLDAFAQYGEEPLLRARHYFA 294 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLA---LHGKSELELAAQKALELLDYVSDITTVDGK 339 + I + LAEC ++A E AA A + + Sbjct: 295 ---LATRIDPSFVSAFAALAECQATIARAPFCQDQPAERAA--AQRSAEQALHLDETAPA 349 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 L G + ++ A+ + N +EA + ++ Sbjct: 350 AHFAFAHTRWLLGDVDAAFRHARRSVELGPGYATGVAEVGFLAALNGPPDEALHNLARAE 409 Query: 400 QLEP 403 L P Sbjct: 410 LLNP 413 >UniRef50_A6UAU6 Tetratricopeptide TPR_2 repeat protein n=3 Tax=Rhizobiaceae RepID=A6UAU6_SINMW Length = 626 Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats. Identities = 51/312 (16%), Positives = 101/312 (32%), Gaps = 10/312 (3%) Query: 100 RFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYP 157 R K + SIA+ PF + + + + + + + L Sbjct: 210 REESPAPKQNRPRPDMKRPSIAVLPFVNLSSVDEQEHFSDGFTEELISTLARCRWLRVVA 269 Query: 158 MAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--L 214 ++ F + S Y + G I + + +L+ + L+ + Sbjct: 270 RNSSFTFKGVTVDVRKVASDLGVKYVIEGSIRRAANRIRITAQLLSGETGMLLWAERYDR 329 Query: 215 PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPES 273 +D++ I I TV + A + + L G LY F E+ Sbjct: 330 MLDDVFVLQDEIAGQITGTVEPELGFIEFAALRGQSATDMDAWNIYLKGLWHLYKFDLEN 389 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSD 332 + + +F+R D++ + Y LA H+ L +G E A L + + Sbjct: 390 LRISKELFER---AIDLEPAFAQAYARLAYVHIQLGWYGPLEERGDRIADATALAERATA 446 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + + +G L GQ + A A ++ + + EE Sbjct: 447 LDDREPAAHLALGRARALGGQPERGIEHLRNALRLVPSFAQGHFALGQALCYVGRPEEGI 506 Query: 393 ICIDKSLQLEPR 404 I+++ +L PR Sbjct: 507 TAINEAFRLSPR 518 >UniRef50_C3KQE3 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQE3_RHISN Length = 579 Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats. Identities = 52/352 (14%), Positives = 120/352 (34%), Gaps = 15/352 (4%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYR--KGYRFSGQVFKTKINE--DNTSD 117 I VSD + FE G R ++ I + + +R++G T Sbjct: 133 GGICVSDAVHKQLAGKTDFAFEDTGE-RMLKNIAQPVRVWRWAGDQAPTTAAALLPLPGK 191 Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFL 174 SIA+ PF + + + + + I + L+ ++ F I Sbjct: 192 PSIAVLPFDNLSSQPEKTYFSDGITEDIITGLARFRSLFVIARNSSFAFRGKPIDLAEIG 251 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNILQ 232 R Y + G + ++ + +LI+A + + +D++ + + I+ Sbjct: 252 RRLGVSYLLEGSVRRSGDRVRITAQLIEAATGAHLWAERYDRSLDDIFAVQEEVAQMIVA 311 Query: 233 TVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + + + + D +L G + ++ RA +F++ + Sbjct: 312 ALFGRIQEADFERSSRMPTASLTAYDCLLRGLAHFRAYAEDANQRACELFEK---AVALD 368 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 + LA ++ + E A +++ + + I+ I L Sbjct: 369 PRYALAHSYLALVRITFHGWATAPTE-ILDTAFAEARRATELDPQESRCHRILSEICLLR 427 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + ++ QA + + A + V + EEA C++ +++L P Sbjct: 428 REYDMAEEHACQAFDLNPNDADAMMEKGRVLALRGRPEEALNCLEAAVRLNP 479 >UniRef50_Q98LH2 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98LH2_RHILO Length = 581 Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats. Identities = 53/358 (14%), Positives = 119/358 (33%), Gaps = 22/358 (6%) Query: 62 KNIIVSDESLTRCIY-SLRCIFEKIGYDRCIETIYR--KGYRF-------SGQVFKTKIN 111 +V S+ + L F +G D ++ I + YR G V N Sbjct: 130 PGGVVIGRSVYDQVSGKLPYEFIDLG-DHTMKNIAGAVRAYRVGTGEQAQEGPVAIASAN 188 Query: 112 EDNTS-DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDH 167 + S+A+ PF + + + + + + L+ ++ F Sbjct: 189 DLPLPFKPSVAVLPFANMSADPEQEYFSDGITEDLITELSRSQSLFVIARNSSFVFKGRS 248 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDA--KNLFLIASNHLPVDELHNTSQF 225 ++ + Y V G + + A + +LI+A N +D+L Sbjct: 249 VNTTEVGRKLGVRYVVEGSVRKAGARVRITAQLIEASSGNHVWAERYDRSIDDLFAVQDE 308 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQ 285 + + I + + +A+ Q + D L G + + FT + A+ F + Sbjct: 309 VTERIAWALVGKVGTAEIARARQTKTSLGAYDAFLRGMEAAHRFTEDDTIAAIEFF---K 365 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 Q + LA+ + +L+ A A++ ++ G A++ Sbjct: 366 LALRGQPDSARGHACLADAYATLSAFRADGGLKAL--AMQSALRAIELGDASGLAEAVVA 423 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + G + + ++A + A + + + ++ AR ++ +L P Sbjct: 424 ALYAWKGDFEAAETHGQRALVLGPTNALALNWVGYISLWDGQLARAREIGERLQRLNP 481 >UniRef50_A3W697 Transcriptional regulatory protein-like n=3 Tax=Rhodobacteraceae RepID=A3W697_9RHOB Length = 478 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 96/297 (32%), Gaps = 13/297 (4%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSF 173 SIA+ F + + + I + + L+ T + + + Sbjct: 80 KPSIAVLAFENMSDDPGQEYFSDAITADIITALSRSPWLFIIARNTTFTYKGESVDIRRV 139 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 + + + G + + + +LID + S ++++ + I ++ Sbjct: 140 STELGVRFVLEGSVRRAGERVRVTAQLIDGLTGGHVWSERYDGRIEDVFDLQDEITRQVV 199 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSD---EMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 V + N + LYDFTPE+ A T+ +R Sbjct: 200 AQVQTIVHRS-TVEAPVERLNRPDLTVWELTMRSWHLLYDFTPEAYASAKTLLER---AL 255 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAIMGLI 347 I E +L+ + +AL G +E A + A L + + + +G+ Sbjct: 256 AIDPESAESNMVLSLINHHIALMGFAEDPGPAMEAAYALARRATRLDDRNEYAHWALGIS 315 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 + E+A + + + Y + EEA + ++++ PR Sbjct: 316 CWGLHRLDEGIAALERAVELNPNCSVAYGSLGTALAIAGRAEEAIANQEVAIRMNPR 372 >UniRef50_D0DB83 Transcriptional regulator domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0DB83_9RHOB Length = 541 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 62/426 (14%), Positives = 130/426 (30%), Gaps = 50/426 (11%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE--SLTRCIYSLRC 80 L+ + ++ ++ L + + + +W + SL + + LR Sbjct: 12 LSGPGAPDQLSRRGQAMMAYLSRQPEMRAERAALADLLWSDRAEEQARASLRQELSVLRR 71 Query: 81 IFEK--IGYDRCIE--TIYRKGYRFSG-------------------------------QV 105 + + + DR I + + G SG V Sbjct: 72 VLPEGLLAADRQIVRLDVRKVGTDLSGGGRFLEGFDLPSEAFEDWLRQERSAQDAGPQPV 131 Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATN 162 + S +A+ PF S D +L +V+ I + ++ + +A Sbjct: 132 HPAGPPPRD-SRPGLAVMPFQ-SYGAPDDEMLAVGVVEDITSALSRVREFHIVARQSAFG 189 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELH 220 S +R DY V G + Q + + L A++ I + H +D+L Sbjct: 190 LRGGDRDVASVGARLGVDYVVEGSVRQQGQRVRISVHLAAARDGRTIWAEHFDDRIDDLF 249 Query: 221 NTSQFIIDNIL-QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMT 279 + I + Q + + + + + L+ + PE +AM Sbjct: 250 DLQDRIAALVAGQIAPHLRAAEIARARRRAPEERTAYELTLSALPHFWSHRPEENLKAMR 309 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECH-MSLALHGKSELELAAQKALELLDYVSDITTVDG 338 R + A CH + AL+L++ + D Sbjct: 310 FLSR---ALEHTPDYAPALAYKAWCHAHQCCYLWSEDGHSDRDAALDLIERARPLVQNDA 366 Query: 339 KILAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 L +G ++ + + L ++A + + A + R + +A D+ Sbjct: 367 ASLVALGATCSMAANDFEQAAALVDRALLLDPNNAWGWLRRGWNSVYKGDAAQALRDFDQ 426 Query: 398 SLQLEP 403 +L P Sbjct: 427 CERLSP 432 >UniRef50_Q89G05 Bll6543 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89G05_BRAJA Length = 667 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 48/328 (14%), Positives = 107/328 (32%), Gaps = 23/328 (7%) Query: 103 GQVFKTKINEDN----TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTY 156 G+V S+ + PF+ + + I + + L Sbjct: 256 GEVAPEASPPPALVMHGERPSLVVLPFSNMSGDPEQDYFADGVTADIITALSRFRALVVI 315 Query: 157 PMAATNFCNDH-ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH-- 213 + D ++ + Y ++G+I + + EL + + + S+ Sbjct: 316 ARGTSFALRDKGMTSQQIAQQLGVQYVLSGQIRKAGNRIRVSAELTHSGSEAQVWSDRYD 375 Query: 214 LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDF 269 P+ ++ + + ++ V +VR A+ ++ + + D L L+ Sbjct: 376 RPLTDIFDLQDDVSSSVAAVVD---PAVRSAEIERARRKPPTNLSAYDLYLRALHHLWGG 432 Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 T E I +A+ + + + ++ LA + + G A +AL L Sbjct: 433 TREDITKAIDLL---RQSLSLDEARSPTLAALAWGLVMASPLGAHTSPDATTEALSLARR 489 Query: 330 VSDITTVDGKILAIMGL-ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 + D A+ G + G +G I +A + A + ++ Sbjct: 490 AVEQDGTDAFAHAVYGFTLFGPAGDNDQGRIHAVEAVRLNPSSAFAWGTLGMIDSMAGDY 549 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVD 416 E A C+ +SL L P ++ + Sbjct: 550 ENAVTCLHRSLVLSPYD---SMLHLWMT 574 >UniRef50_Q1MES5 Putative adenylate cyclase n=4 Tax=Rhizobium RepID=Q1MES5_RHIL3 Length = 670 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 44/315 (13%), Positives = 96/315 (30%), Gaps = 20/315 (6%) Query: 104 QVFKTKINEDNTS---DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM 158 V + + S+A+ PF + +V+ I + + LY Sbjct: 256 PVPQPQAISAPAKHHDRPSVAVLPFQNLSGDAEQEYFADGIVEDITIALAQFRHLYVIAR 315 Query: 159 AAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD 217 ++ + + Y V G + + + +LID + ++ Sbjct: 316 NSSFTYKGQAVDIKQVGRELDVRYVVEGSVRRTGDRLRIAGQLIDTSTGTHLWADRFD-G 374 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYD--FTP 271 L N V V A+ ++ + S D L G Sbjct: 375 TLANVFDLQDQVASSIVGAITPKVEEAEIERAKRKPTESLDAYDYYLRGLAAFDRTVTNR 434 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG--KSELELAAQKALELLDY 329 I A+ +F + + + A C+ + +G + + A+ A L Sbjct: 435 SVIDEALRLF---REAIERDPEFAVAHARAARCYATRKSNGWMLNPADETAE-ATRLARR 490 Query: 330 VSDITTVDGKILA-IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 ++ D L +I + G S ++A + ++A+ + V + Sbjct: 491 AVELGWDDAVALTYGGYVIGYVGGDLDDSAACIDRAVSLNPNLAAALGVSSWVKVCLGEP 550 Query: 389 EEARICIDKSLQLEP 403 ++A +++L P Sbjct: 551 DKAIEHATLAMRLSP 565 >UniRef50_D0CP82 Transcriptional regulator domain protein n=4 Tax=Rhodobacteraceae RepID=D0CP82_9RHOB Length = 452 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 53/297 (17%), Positives = 111/297 (37%), Gaps = 13/297 (4%) Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNS 172 + S+A+ PF + + + + + I + ++ +T + + Sbjct: 56 ARPSLAVLPFRDLQGSDEDRYFGEGITEDIVTGVSRSRAIFVVARTSTLQMTKESMPSRE 115 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQ 232 + Y +TG I ++ + ++ EL+D + +++ D + F + Sbjct: 116 VAAALGVKYLLTGSIRRSGNLLRIHTELVDVVRNRAVWADNFDGDT-ADIFTFQDHIVSS 174 Query: 233 TVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 V E SV+ A+ S D +L G ELY F +S AM++F R Sbjct: 175 IVATVEPSVQSAEAANLVTRPTESLDAYDCVLRGLPELYRFEGQSYETAMSLFRR---AV 231 Query: 289 DIQTLKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 ++ + + + LA C + +A S ++ + A+ ++ D L+I G I Sbjct: 232 ELDSGYAQAHSYLAWCLNFWIAEGKSSNVDRDSATAVFHARKGVELDPEDALNLSIRGHI 291 Query: 348 TGLSGQA-KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 L + + +QA + ++ + A H + AR + +L P Sbjct: 292 LSLLEHRPHEAVDIMDQALSLNPNLPLAWGISATAHAYLGNGAIAREHMLNVWRLTP 348 >UniRef50_Q9Z3Q0 Putative adenylate cyclase 3 n=1 Tax=Sinorhizobium meliloti RepID=CYA3_RHIME Length = 587 Score = 148 bits (372), Expect = 5e-34, Method: Composition-based stats. Identities = 38/312 (12%), Positives = 96/312 (30%), Gaps = 14/312 (4%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 + + SIA+ PF + + + I K+ GL+ Sbjct: 181 EPPNIAAEPPPQLPAKPSIAVLPFDNMSGDPEQGYFADGITEDIITDLSKVSGLFVIARN 240 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPV 216 ++ + Y + G + + + ++ID + + + Sbjct: 241 SSFAYKGKTPDIRKVSRELGVRYVLEGSVRRAANRIRINAQMIDGTTGGHLWAERYDRGL 300 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIY 275 +++ + I+ + + +++ K + D ++ ++ + F S Sbjct: 301 EDIFAVQDEVTRTIVNALRVKLTAGEEERRESRGKVDPEAYDLLVRSRQAILQFNALSSM 360 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLL---AECHMSLALHGKSELELAAQKALELLDYVSD 332 A + R+ +I + L A +G + +AL L D Sbjct: 361 EARRMLHRV---LEIDPGMAAAHASLSIIALTDFINQWNGATPDN--LTQALGLAQEAID 415 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + + + L + + E+A + A+ Y + + EEA Sbjct: 416 TDGSEPQGHYTLALALSWMRRLDEAEHAAERAIELDPNSANAYTALGTIRDFQGRHEEAL 475 Query: 393 ICIDKSLQLEPR 404 ++ +L+P+ Sbjct: 476 ALYTRAHRLDPQ 487 >UniRef50_A6UDI5 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 Tax=Alphaproteobacteria RepID=A6UDI5_SINMW Length = 588 Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 98/308 (31%), Gaps = 16/308 (5%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-N 162 +T + S +I + PF D L + I + L+ ++ Sbjct: 178 PETADAGRSVSKPAIVVLPFDNMSGDPDQEFFADGLTEDIITELSRRHELFVISRNSSFV 237 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELH 220 + N ++ + Y V G + + + ++LIDA N I ++ +D++ Sbjct: 238 YKNQPVNVREVAEKLGAQYLVEGSVRKIGDRVRVTVQLIDAVNDAHIWADKYDRRLDDIF 297 Query: 221 NTSQFIIDNI-LQTVHKPERSVR--LAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 + I + E + R LA+ Y T +A Sbjct: 298 AIQDEVTSAIAATLPGRVEAAQRDLLARTKPANMAAYECALAAKVLHH--RSTVADNRQA 355 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK--SELELAAQKALELLDYVSDITT 335 + DR + + A C + A + + A + + LD + Sbjct: 356 RALIDR---AVALDPGYAHAHAWRA-CILGQAWVHGWCDDKDAAWAEIVSELDRALALDD 411 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 D + I+ + + + E+A + + + + + + EE I Sbjct: 412 NDADVHRILAAVNVNNNALTTARYHQERALSLNPNYDLVVVQQGELLMWLGRPEEGIEWI 471 Query: 396 DKSLQLEP 403 K++QL P Sbjct: 472 RKAMQLNP 479 >UniRef50_B6B5A4 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5A4_9RHOB Length = 589 Score = 146 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 55/363 (15%), Positives = 119/363 (32%), Gaps = 26/363 (7%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETI--YRKGYRFSGQVF-----KTKINEDN 114 + VS + LR FE +G + ++ I Y +V T+ E Sbjct: 136 GRVFVSASVYEQIRNRLRFGFEFLG-PQMLKNIAEPVAAYCVRSEVAGATMAATRRPEAP 194 Query: 115 TSD------YSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAATNFCND 166 + S+A+ PFT+ L + I++ K L+ ++ F Sbjct: 195 PAHRPPPGIPSVAVLPFTSLGGEPSDSWFADGLTEDIILNLSKFKNLFVIARNSSFFFKA 254 Query: 167 HISQN-SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTS 223 Y G + + A + +ELIDA+ I +D++ Sbjct: 255 STKPPQEAARELGVRYVARGSVRRAAARVRIAVELIDAETGRTIWGERYDRNIDDIFAIQ 314 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEM-LAGKKELYDFTPESIYRAMTIFD 282 + D I+ + + Q + L G++ ++ +T + A T+++ Sbjct: 315 DEVTDAIVAATAVLIEAQERKRMAQTAPADLAAYGYVLRGQQYIFRYTRQDNREAQTLYE 374 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALH--GKSELELAAQKALELLDYVSDITTVDGKI 340 R ++ +++ + E A AL ++ D + Sbjct: 375 R---ALSRDQDYARASAAISRT-LNIDWRYSWAKDAEHALDTALSYAQRAVELDPTDARG 430 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 +G + + + + +A + + A L A H+ + A + ++++ Sbjct: 431 FGELGFVHLYRKEHDAAIGAYRRALALNPNDADLLSDYADALAHSGDNQAAIGNLQQAMR 490 Query: 401 LEP 403 L P Sbjct: 491 LNP 493 >UniRef50_UPI0001907507 adenylate/guanylate cyclase n=4 Tax=Rhizobium etli RepID=UPI0001907507 Length = 583 Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 104/307 (33%), Gaps = 16/307 (5%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT-NF 163 + + SIA+ PF T D LV+ I + L+ +T + Sbjct: 167 PSPVRLSGQVRASIAVLPFQNFSVTPDQDFFVDGLVEDVITELSRFRWLFVIARNSTFAY 226 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHN 221 Y V G + ++ + ++L+DA + I + P+ + + Sbjct: 227 KGTAKDVRKIARELGVRYVVEGSVRRSGERLRITVQLVDALSGAHIWAERWDRPIADFFD 286 Query: 222 TSQFIIDNILQTVHKP----ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 I I+ + ERS+ LAK N + G EL F S A Sbjct: 287 VQDEITRRIIAGIEPELGAHERSLALAKSTD---NLTAWELCHRGFAELLSFEAGSQATA 343 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTV 336 + + Y LA +L L G +E+ +A ++ L +I Sbjct: 344 EKFL---RQALEHDPNFALPYAYLARHRYALVLWGRAAEVPVAVEEGLSFATKALEIDRR 400 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 A+M L+ ++G+A + + EQ + + A L++ + + Sbjct: 401 SDIAYAMMSLLLTVAGRAAEAMPVAEQGLALNQNYAFLHFAHGMAAVRLRDADATIRAAQ 460 Query: 397 KSLQLEP 403 ++ L P Sbjct: 461 NAIDLSP 467 >UniRef50_A8TLG8 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLG8_9PROT Length = 472 Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 82/318 (25%), Gaps = 24/318 (7%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPM-AATN 162 + + SIA+ PFT + L+ + + I + ++ L+ ++ Sbjct: 69 VPSALGTQPVGKPSIAVLPFTNMSGDPEQDYLSDGITEDMITALARLRWLFVIARHSSFV 128 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNT 222 + + Y + G + + + +LIDA+ I + D + Sbjct: 129 YKGRAVDVRQVARELGVRYILEGSVRTSGQRIRITGQLIDAETGNHIWAEKYDRDS-RDI 187 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAM 278 D V E + + + S + L A Sbjct: 188 FAVQDDITEHVVAAVEPHLYAEEGFRASSTQPDSIDAWGLVARALMLLNKVEHTQNEEAQ 247 Query: 279 TIFDRLQNKSDIQTLK-------TECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 + R ++ A C+ + + + A Sbjct: 248 VLLLR---AIALEPGYARAHALLAWAAWWAALCYW------VDDTQEGYRTAAAHAQDAL 298 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 D + GL +GQ + + A + +EA Sbjct: 299 SYDPTDPWARMVSGLCFSTAGQHDRALGELQAALRLNPSFGLGRMALGWGLLRAGSFDEA 358 Query: 392 RICIDKSLQLEPRRRKAV 409 ++L++ P A Sbjct: 359 VAETGRALRMSPVNSFAG 376 >UniRef50_D0CVN3 Adenylate cyclase protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVN3_9RHOB Length = 626 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 100/303 (33%), Gaps = 12/303 (3%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDH 167 T SIA+ F + L+ + I + + + +T D Sbjct: 226 AAVPMTGKPSIAVLAFDNLNRDPEHDYLSDSFSENITTALSRFVDFFVIARDSTLGFKDQ 285 Query: 168 -ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQ 224 + Y + G + + +LIDA + + ++ D + + Sbjct: 286 PVGIQQVAEELGVRYVLDGSVQVAGDRLRVTAQLIDATSGKTLWADSYDRDLQDFFSVQD 345 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDR 283 + I T+++ + + ++ + + +++ + FT E RAM + Sbjct: 346 EVTRTIALTLNENIDLAEYDRLEHKPTDNLNAYELFKRAQEQAFTFTKEGNIRAMRL--- 402 Query: 284 LQNKSDIQTLKTECYCLLAECH---MSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 + + Y LA H K+ E A A E + + K Sbjct: 403 SEKAIALDPNFAGAYIELAWAHNFGYRWGWTEKTSREEALTLAFEAARKAIKLEPFNFKA 462 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 ++ IT SG + + ++++A + + A + + + EA + +++ Sbjct: 463 HQVLASITAHSGDLEKAAAIYDKAISLNPNSAQVLADSIDPLVYGGRAAEAVDRMQTAIR 522 Query: 401 LEP 403 L P Sbjct: 523 LNP 525 >UniRef50_A9E7U9 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E7U9_9RHOB Length = 565 Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 124/342 (36%), Gaps = 16/342 (4%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHI 168 E + SI + PF N+ D + L + + S + L+ + + + Sbjct: 174 ERAIPNQSIVVLPFEFQGNSEDDKWFAEGLTEDVTTSLSRFHNLFVISRDSAYMYRDRLK 233 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFI 226 + S + Y V G + ++ A + I+L+DA I + +++L + I Sbjct: 234 APKQVASELRVRYVVEGSVRKSGARLRITIQLLDALLNRTIWGEQYNRNIEDLFDLQDEI 293 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDE----MLAGKKELYDFTPESIYRAMTIFD 282 I+ + + +Q++ + +L G++ L +T + + A ++F+ Sbjct: 294 NQVIVSATAAQ---IEVTEQERTRLLPPANLLAYGIVLKGERYLSRYTQKDVQNARSLFE 350 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKIL 341 + + + Y + + + SE + +AL ++ D + Sbjct: 351 ---AALESDSSYSRAYAASSRTSNLIWRYDWSEDTANSLDEALVFAQRAIEMDGSDARGF 407 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 +G + + + +++A + + A++ A H+ + EE+ + K+++L Sbjct: 408 GELGFAHLYRKEHEAALNAYDRALKLNPNDANVMSDMADALAHSGRSEESIDLLQKAMRL 467 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVII 443 P V + + IK K R I+ Sbjct: 468 NPFYPDQYVWHLGGAYFNLKRYDDAIKTIQKMQNPTEGRRIL 509 >UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism RepID=A5CFS9_9ZZZZ Length = 627 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 76/475 (16%), Positives = 159/475 (33%), Gaps = 63/475 (13%) Query: 2 DLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 DL + + G+L QG + + + VL++L G VV D I+E+VW Sbjct: 6 DLRKG--FELGPWQVSPDLGLLRQGETEQRVEPMVMNVLVLLASGNGDVVTTDQIVEAVW 63 Query: 62 KNIIVSDESLTRCIYSLR-CIFEKIGYDRCIETIYRKGYR-------------------- 100 + E++ + I LR + + + I+TI + GYR Sbjct: 64 GGRSTATEAIVQKIKVLREKLGDDPKDPKFIQTIPKIGYRVVCPVVVPEVVEPEWLRSFF 123 Query: 101 ---------------FSGQVF---KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELV 142 V ++ + S S+A+ PF D + Sbjct: 124 PAYIWPIVGGISAIAVIAIVVLGNRSGRLQRLESVSSVAVCPFENMSTQADEPFVFGFRE 183 Query: 143 QIIS-NKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELI 201 Q+IS + L + C D + D VTG + + + +L Sbjct: 184 QLISTLSREPNLRIVKAS----CKDDTVP---GEQL-IDSIVTGSVQRAGGRVRITAKL- 234 Query: 202 DAKNLFLIASNHL-----PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS 256 +A + + S + V+E+ + + + + + + A Y Sbjct: 235 EANDGEIFWSESIDGAAEEVEEVFGLHERVANRVRSAILGDSETEVSASSSPVNIEAY-- 292 Query: 257 DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL 316 D L G + + RA+ F++ D Y A ++ LA + + Sbjct: 293 DLYLLGDFAFSKRSEPELNRAVDFFNK---AIDQDPNFGPAYLGKANSYLLLADYDPAAR 349 Query: 317 ELAAQKALELLDYVSDITTVDGKIL-AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 E + A+E D +++ + + G + + F+ A +T + + Sbjct: 350 ESMYEMAIETADSGAELDPGIRDAVRTVYGFVDTKRANWAEAAEAFDIAINSATVYPTAH 409 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLY 430 ++ ++ + +++A + +++ + + V + N +N K Y Sbjct: 410 HWYSIFLENVGLLDQALEQAIIAREMD-TASPILNARLGVAYHWLNDSENADKYY 463 >UniRef50_A5PAK2 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAK2_9SPHN Length = 542 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 99/308 (32%), Gaps = 9/308 (2%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMA 159 + + ++ ++ I PF L++ ++ I L + Sbjct: 128 VAIPVPHRAAKTGATEKTLLILPFRQPAGEATDDYFADGLIEDVTSELSHIRQLQVISRS 187 Query: 160 ATNFCNDHISQN-SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PV 216 D + + R +TG I + + L+D + +I S + Sbjct: 188 TAFEFKDSPTPPDAIGRRLGATAVLTGSIRRAGDRARISAALVDTDSGMIIWSETFNRTL 247 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY-KNHYLSDEMLAGKKELYDFTPESIY 275 +++ + I+ + A+ D+ ++ G E++ F PES+ Sbjct: 248 EDVFAVQDELTREIVTALDVELVHGEQARLDRSRFRSAEAGHIFYRGVFEVHRFEPESML 307 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT 335 A +F +++ Y L + L E A E I Sbjct: 308 HARRLFSEF---VEMEPDSVLGYAWLTTSWAASLLVQWEAPEDALPAMQENAAKALAIEP 364 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + L L+G V+H ++A + + R V + +++ + + Sbjct: 365 DNAAALIGNVYFHVLTGNLDVAHDFAQRAVRSAPSSDEALFARGWVEMFLGRFDQSIVSL 424 Query: 396 DKSLQLEP 403 +K+L+L P Sbjct: 425 EKALRLAP 432 >UniRef50_Q2C702 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C702_9GAMM Length = 267 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 36/254 (14%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 + + + ++ KE VL +LLE+ + K+++ W IV+++SLT I LR Sbjct: 18 RRLSSNDGKNAFLTPKEACVLTILLEAKDQCINKEVLFCGCWGETIVTEQSLTNIISKLR 77 Query: 80 CIFEKIGYDRC-IETIYRKGYRFSGQVFKTKINEDNTSDYSI----AIFPFTTSLNT--- 131 I + + D I T+ ++GY + +TKI ++ SD ++ P T +++T Sbjct: 78 KILKSVCGDLITISTVIKEGYILE-ILPETKI--EDVSDENLVKEQCCKPATHTMSTDKK 134 Query: 132 --LDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + I + IIS +YTY + F D N + K +++ + Sbjct: 135 RYIICSIFFASFLMIIS------IYTYYARKSPFFLDKQEYNITKNINKSRFYLQSMTKK 188 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPER---SVRLAKQ 246 NA + L+ L + +P D N F+ I Q++ PE+ S+ L Sbjct: 189 RNASDPLFDAL----------AATIPTD--CNLDLFV--RIYQSIDAPEKEGMSIFLVNS 234 Query: 247 DQGYKNHYLSDEML 260 D Y N YLSD + Sbjct: 235 DNQYANFYLSDYKM 248 >UniRef50_C3KN58 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN58_RHISN Length = 635 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 98/308 (31%), Gaps = 11/308 (3%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAA 160 G V + D SI + PF D + + + I K+ GL+ + Sbjct: 230 GAVLQEASLPD---RPSIIVLPFNNMSRDADQEYFSDGITEDVITDLSKVSGLFVIARNS 286 Query: 161 T-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD-- 217 + + + + + G I + + +LID + + + D Sbjct: 287 AFVYKDKTFNVPQVCRELGVKFALEGSIRKAGNRVRVTAQLIDGSSGGHVWAERYDRDLT 346 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQ-DQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 ++ I I+ + + ++ + G ++ D L G+ E+ + Sbjct: 347 DIFEVQDDITQQIVAALKVTLSAAEKSRSAEAGTRDVDAHDLFLRGR-EMLRAVKKDRDM 405 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITT 335 + + L ++ + S E + A D Sbjct: 406 FEQATACFRQALALDPNYAAPCAGLGLAYVLDYQNHWSAAPETSLDAAERFADEAIGKDD 465 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 D ++ L+ + ++A + + AS R ++H + + + A I Sbjct: 466 QDPFNHFVVSLVAMFRRNYRRWGESADRALALNPNFASALNMRGVLHLYTGEPKLAIPDI 525 Query: 396 DKSLQLEP 403 +++++L+P Sbjct: 526 ERAMRLDP 533 >UniRef50_B5ZU37 Adenylate/guanylate cyclase with TPR repeats n=8 Tax=Rhizobiales RepID=B5ZU37_RHILW Length = 568 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 94/292 (32%), Gaps = 12/292 (4%) Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFL 174 SIA+ PFT L + + + GL+ + + ++ Sbjct: 185 PSIAVLPFTNMSGNEADAPFVDGLTEDLITDLSRTAGLFVIARHSVYGYKGKPVNVKLVA 244 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQ 232 Y + G + + +L+D + + + ++ + + I++ Sbjct: 245 QELGVRYVLEGSARRAMGRVRINAQLVDTADGGHLWAERFDRTLENVFELQDEVNAKIVE 304 Query: 233 TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQT 292 + + + N D + + L + +P++ A + R ++ Sbjct: 305 ALVG---RLTIPTPRNRPTNFEAYDLCVRARL-LTEESPQTEREAYMLLQR---AVKLEP 357 Query: 293 LKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG 352 E LLA H + + A ++ D ++G I Sbjct: 358 SYAEALGLLAYNRWLAWTHFGEPEDPNREMATTSAQKAVELDPNDAGCRYVLGTILAYER 417 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 + + S F +A + A + + + + ++ + I+K+L+L PR Sbjct: 418 RWEESEAAFAKALELDPNHADTWAAMSDISVLDGRVADGLAQIEKALRLNPR 469 >UniRef50_B5JPL6 Tetratricopeptide repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL6_9BACT Length = 607 Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats. Identities = 41/333 (12%), Positives = 104/333 (31%), Gaps = 13/333 (3%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAATNF 163 ++ +D SIA+ F + + + + N K+ GL ++ Sbjct: 141 TRSSDEVVVETDSSIAVLAFENLSEDAGNEYFSDGISEELLNVLAKVSGLKVSARTSSFH 200 Query: 164 CNDHIS-QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELH 220 D + + Y + G + + + +LI A + F + S+ + ++ Sbjct: 201 FKDKDTPIPEIAQQLGVAYVLEGSVRKAGDTVRITAQLIKADSGFHLWSDSFTRELKDIF 260 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 I I + + + ++ + N D L G T +A+ Sbjct: 261 AVQDEIAGLIAKQLQLE---LGVSTVAKKTVNPEAHDAYLKGLFNHAKETKAGYEKAIEF 317 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 +++ + ++ +++L KA ++ + + Sbjct: 318 YEQ---ALEKDPNYASANAAMSWSYLTLGWWAHLPPREVFPKARVAAQKALELDNANAQA 374 Query: 341 LAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 +G I + + F++A S + + + V+ + E + +L Sbjct: 375 HITLGAIKMIYEFDWVGADKEFKRALELSPNDSQAHNMVGWVYRIQGEHEASMKAFRTAL 434 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 +L+P A + + I Y++ Sbjct: 435 ELDPLNVLAN-FQVGRAFFFARQYDQAIAHYHR 466 >UniRef50_B9NM62 Adenylate cyclase Cya3 n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NM62_9RHOB Length = 613 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 101/305 (33%), Gaps = 11/305 (3%) Query: 107 KTKINEDNTSDYS-IAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-N 162 ++ + + I + PF + D + + I + K+ L +T Sbjct: 212 PPRVTPASHAKSLLIGVLPFNNLSSDPDQEFFADGITEEIITTLSKLPSLLVVARNSTFV 271 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELH 220 + + D + G + Q+ + +LIDAK+ I ++ ++++ Sbjct: 272 YKGRSVDVKQVGLEQGVDLVLEGSVRQSGNRVRITAQLIDAKSGMHIWADRYDRLIEDVF 331 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQD-QGYKNHYLSDEMLAGKKELYDFTPESIYRAMT 279 I I + + +A+ G KN L + T E+ A Sbjct: 332 EVQDEIALRIATELQVELLAGEMARFRGSGTKNLSAWTAQLQAVEASRKITKEAHTDARR 391 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDG 338 Q + + +C L A HG A +A + +I + + Sbjct: 392 F---AQQAIALDPGYSAPHCTLGFICTVEARHGFVADRRATLAEARDCAQRALEIDSYNP 448 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + AI G + G+ + F +A + + A + +L N + EA ++ Sbjct: 449 EAHAIAGFADAIDGKLVSAIEKFNEALALNPNHADVAARLSLTLGFNGQAREAIRVAQQA 508 Query: 399 LQLEP 403 + L P Sbjct: 509 ITLNP 513 >UniRef50_B5ZNG5 Adenylate/guanylate cyclase with TPR repeats n=12 Tax=root RepID=B5ZNG5_RHILW Length = 598 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 42/310 (13%), Positives = 100/310 (32%), Gaps = 12/310 (3%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 + SIA+ F + + + + I K+ L+ Sbjct: 185 EQPAPRRPTAAAVPDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHVIARN 244 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE 218 ++ + N S Y + G + + + +LIDA N I ++ D Sbjct: 245 SSFVYKNVTASVPEMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRYDRD- 303 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESI 274 L + + + V + ++ QD+ + + + +L G+++ Sbjct: 304 LTDIFAVQDELTQEIVTALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNRTGN 363 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDI 333 A ++ + + L++ H+ ++ S + E + + L+L D+ Sbjct: 364 RAARSL---AADALAVDPDYAAARALISFTHVLDYVNAWSDDPEGSLRTGLDLAQQAVDM 420 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 +G+ + + + + S + A L A + A Sbjct: 421 AEEQPNSHFALGMACMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALA 480 Query: 394 CIDKSLQLEP 403 +D S++L+P Sbjct: 481 TLDASMRLDP 490 >UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT48_9RHOB Length = 493 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 61/395 (15%), Positives = 122/395 (30%), Gaps = 39/395 (9%) Query: 43 LLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS 102 L G V +D +IE +W+ V+ +S+ +CI +R + E I R +ET+ RK YR Sbjct: 3 LARVPGETVNQDALIEEIWQGRAVTPDSVAQCIAEIRRVLEDIDK-RIVETVPRKVYRLV 61 Query: 103 GQVFKTKINEDNTSD---------------------------YSIAIFPF----TTSLNT 131 IA+ PF Sbjct: 62 PPTAAVPDRSSRKQQLALLAVMVLCICAFAFALLRPGAPPGPPVIAVLPFDDFSPLEYQG 121 Query: 132 LDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNN 191 ++ + +++ L ++ F N + + R D+ + G + Sbjct: 122 YLSDAVSDNITTLLARY-PQFLIISQRSSFTFRNSDLPVSDIADRLGADFVLEGSQQYDG 180 Query: 192 AVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 LID + ++ +P+DEL + I I V E+ V +A+ Sbjct: 181 THVRTTARLIDGATEASLWADEFDVPLDELLRANSRISRKIANAVG--EKVVDMAEPQMS 238 Query: 250 YKNHYLSDEMLAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSL 308 + A + + F+ +S+ + ++ L + Sbjct: 239 DGDVSALLIANAAQSRIMRNFSRDSLLVNIAEQEQSIRDYPNSAWGPLGQALSLRIGLRY 298 Query: 309 ALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHS 368 E + Q+ +L ++ + +G + + + + F +A + Sbjct: 299 GWVEGDE-DAIRQRMDDLARRGVELDPNNFLAFHALGRVLMFNRDVEGAISAFRRAVDLN 357 Query: 369 TDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + A K EEA I ++P Sbjct: 358 PSSSFARNALAQALAFVGKTEEALEEIADIELIDP 392 >UniRef50_C3ME30 Adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3ME30_RHISN Length = 674 Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 105/305 (34%), Gaps = 10/305 (3%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFC 164 +T + SIA+ PF D L + L + + + +T Sbjct: 271 QTARAAETDFRISIAVLPFLRPAEDADQSFLAEGLAEDLITELSRHKDFLVIARQSTLAL 330 Query: 165 NDHISQNS-FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHN 221 + Y +TG + + +L ++L+D + + ++E+ Sbjct: 331 DPEPRHAEHAARALDVRYVLTGNLRRRGEDLSLGVQLVDTATHRTVWAERYTRKLEEIFA 390 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTI 280 + I+ I+ V RS + + + + G +Y+F+ + I A Sbjct: 391 VQEEIVGLIITAVDAEVRSSERERALRKLPETMDAWELFHRGLWHVYNFSIDQIEAAEEC 450 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGK 339 F R + + + LA+ + + SE A + L + + Sbjct: 451 FRR---ATVLHPRFALGHAGLAQAAVVRIVWQMSEDIPATLESGLAHARHAVALDGAHPY 507 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 ++G + G+ ++H A + A +Y A VH + + EA ID+++ Sbjct: 508 PHVMLGRLLTCQGELGLAHDHLRIAIELNPSYAHAFYALAQVHIWSGRPGEALSYIDRAI 567 Query: 400 QLEPR 404 + PR Sbjct: 568 RFSPR 572 >UniRef50_A0LHH5 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHH5_SYNFM Length = 631 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 95/309 (30%), Gaps = 10/309 (3%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 ++ SIA+ PF L + + + ++ L+ Sbjct: 226 VDDTTVQRMAFPLPDKPSIAVMPFVNMTGEQSQDFFCDGLSESLIAALSRVPELFVIGRD 285 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPV 216 +T + Y + G + + + +LIDA + S V Sbjct: 286 STFIYKGRAAPMRQVSEDLGVRYVLEGSVQRAGDRVRVTAQLIDALKGHHLWSERYDRNV 345 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDE-MLAGKKELYDFTPESIY 275 ++ I IL + A+ N+ + +L G+ E+ Sbjct: 346 KDIFELQDEISMKILTELRVKITEGEAARILPKGTNNLQAYLKVLEGEWYRNQNNKEANN 405 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDIT 334 A ++ ++ Y LA G S+ + A++ ++ Sbjct: 406 VAKRLYHE---AVELDPAYAMAYVGLARAQGFDVWLGASKSPKETLADAMKSARKAIELD 462 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 + A + + + + + E+A + + A+ Y +V + + EEA Sbjct: 463 DSSAEANAAASAVLVAMREHEKAIEVGERAVTLNPNSANALYTLGMVLNYAGRSEEALPL 522 Query: 395 IDKSLQLEP 403 + ++++ P Sbjct: 523 LRQAVRFNP 531 >UniRef50_A6UCV6 Adenylyl cyclase class-3/4/guanylyl cyclase n=15 Tax=Rhizobiales RepID=A6UCV6_SINMW Length = 634 Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats. Identities = 46/308 (14%), Positives = 98/308 (31%), Gaps = 15/308 (4%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMA 159 + + D + SIA+ PFT + + + + + I K+ L+ Sbjct: 186 VAKGSEPAGVVDRGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLHVVARN 245 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD- 217 + + + + G + + + +LIDA+ + ++ D Sbjct: 246 TVFTYKGKAVKVKQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDL 305 Query: 218 -ELHNTSQFIIDNILQ---TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES 273 ++ I I+ PE + Y L G++ + +T Sbjct: 306 TDIFAIQDEITHAIVNQLKIKLLPEEKKAIESDPTTSVEAY--TYYLRGRQFSHTWTKPY 363 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + A +F ++ Y +AEC A+ E E + L++ + Sbjct: 364 LLLARRMF---LKAVELDPNYARAYAGIAEC--ECAIRDWHEKEFPLKSILDMSAKALAL 418 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + A GL GQ + + F QA + Y F + +EA Sbjct: 419 DPNLAEAHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIG 478 Query: 394 CIDKSLQL 401 +++ ++ Sbjct: 479 FFERAAEI 486 Score = 51.7 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 5/122 (4%) Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT 334 A+ F+R ++I++ L CH+SL E + A+ +E + Sbjct: 474 QEAIGFFER---AAEIRSDDYFSPIHLMGCHLSLGREA--ERQRWARIGIERATRALERN 528 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 + L G+A+ + +A D Y A V+ + E A Sbjct: 529 PENASPAHRGALALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALEL 588 Query: 395 ID 396 ++ Sbjct: 589 LE 590 >UniRef50_A1B7Q0 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7Q0_PARDP Length = 596 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 56/348 (16%), Positives = 117/348 (33%), Gaps = 11/348 (3%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHIS 169 D S+AI P L +V + + + L ++ S Sbjct: 205 PGLPDTSLAILPMENLSADPGDQHLCHGIVADLITNLCRFRHLLVIARHSSFLAAAQTSS 264 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH---LPVDELHNTSQFI 226 R Y +T + + +EL++A++ I S + +D Sbjct: 265 LREIGRRLGVRYLMTSSFRRAGNRLRITVELVEAESENTIWSERYDGVMLDIFDFQDDVT 324 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 + + + + R +Q + Y +L G+ F P++ A +F+ ++ Sbjct: 325 AMTAARVAIQLDANERRRLAEQSHPALYAYGLVLRGQDMGLRFLPDANLHARRLFEEARD 384 Query: 287 KSDIQTLKTECYCLLAECH-MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + Y ++ + + S + A +AL L +D + + MG Sbjct: 385 ---LDPDYGRSYAAMSRTFNVEWRYNWTSNPDAALNQALVLAKRAVQCDALDSRGFSEMG 441 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 L Q + +E A + + A L Y + + E A ++++++L P Sbjct: 442 LAHLYKKQHDEALAAYEHALALNPNDADLLAYTGDCLAYVRQGERAVQLLERAMRLNPYF 501 Query: 406 RKAVVIKECVDMYVPNPLKNNI-KLYYKETESESHRVIIDNILKLKQL 452 A + + I L +SE+HR++ + L Q+ Sbjct: 502 PDAYLWFLGDAYFHHGDYGKTIETLSRMRDQSEAHRLLAASHALLGQM 549 >UniRef50_Q7NE08 Glr4072 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE08_GLOVI Length = 946 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 14/305 (4%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCNDH 167 + + + +IA+ PF + + I+N+ KI L +A + Sbjct: 423 SPASAAARTIAVLPFANIDGDSRSAYFSDGMTFDITNQLGKIADLTVIASSAAMQYRGTT 482 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQF 225 + +TG + +N + +L+D + S + ++ Sbjct: 483 KALREVARELGAGTILTGSVRRNGNRVRIVSQLVDPATGQQLWSQDYERQLKDVFAIQAE 542 Query: 226 IIDNI---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 + + I LQ +RL + Y D L G+ L + A+ +F Sbjct: 543 VSEQIARRLQARLSATEKLRLTQVPTASITAY--DYYLKGRDYLGRRSRADNDLAIELFK 600 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 R + + L + S A + E ++L+ + + + Sbjct: 601 R---ALALDPNYALAHAGLGSAYGSKATR-YGQEERWEAESLKAIKKALVLDPNLSQAHK 656 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G G+ + + F++ + + + + +EE +S+ L Sbjct: 657 ALGSYYYGRGRYRQALASFKRGAELNPSLPVVAGAYGGLSAAMGNLEEGVRWSKRSIALN 716 Query: 403 PRRRK 407 P R Sbjct: 717 PTRNG 721 >UniRef50_Q89G09 Blr6539 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89G09_BRAJA Length = 506 Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats. Identities = 52/344 (15%), Positives = 117/344 (34%), Gaps = 17/344 (4%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPM-AATNF 163 + D S+ + PF N + + ++ ++ G + A F Sbjct: 95 EATARPDVAPRLSLVVLPFANLNNDPEQDYFADSITTDLTTDLAQMPGAFVIGRGTAFTF 154 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE--LHN 221 N I + + V G + +N + + L DA + I S+ D L Sbjct: 155 KNKQIDFKTLGKELGIRWAVQGAVRRNGDQIRVNVSLTDAASGRDIWSDRFDGDRTNLAA 214 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYD-FTPESIYRAMT 279 I + ++++ + ++ + + D + G + Y+ + I +A Sbjct: 215 LQDQITGRLARSLNIELMQAESRRSEKDQSRNPDAMDFTMRGWAKFYEPRSKTEIAQAKD 274 Query: 280 IFDRLQNKSDIQTLKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +FDR + + A C ++ + + + A +L+D ++ + Sbjct: 275 LFDR---ALHLDPDNVDAMIAKAWCLAIAAGFRWSTSMAEDKEIATDLIDRALAKSSSNA 331 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + G + G+ + + ++ A + + Y + L + + EA + + Sbjct: 332 LAYVVKGDTLRVFGRPEEALPEYDAALEINPNFPIAYAQKGLALILSGRAREAFSPLQLA 391 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVI 442 L+L P+ A V Y + Y+E + RVI Sbjct: 392 LRLSPKDPIA------VSWYYNLCHAHLHLQEYEEATKDCRRVI 429 >UniRef50_A8UFP6 Putative adenylate/guanylate cyclase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UFP6_9FLAO Length = 670 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 55/336 (16%), Positives = 122/336 (36%), Gaps = 24/336 (7%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQN 171 D SIA+ PF D I + + I K+ L + + + + Sbjct: 213 AKDLSIAVLPFDNLSTDNDAEIFRDGITEDILTQLSKLKELRVISRTSVMQYKDTKKTIP 272 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDN 229 Y + G I + + +LIDA + + + + + + + Sbjct: 273 EIAEELGVSYILEGSIRKYGDDIRITAQLIDATTDEHLWAEDYDKTLINIFSLQTEVSEE 332 Query: 230 I---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I LQ E LA Y + GK+E+ T ES+ ++ ++ Sbjct: 333 IVDALQINLSFEEQQNLAMVSTKNIEAYK--LVFEGKREVDTRTKESLANSILLYKE--- 387 Query: 287 KSDIQTLKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + + Y +A ++ G+ +E AA+ A LD I ++ ++ G Sbjct: 388 AIVLDPNYADAYAEIANSIYLQTYYSGRDHVE-AAKTAHAYLDKAQKINPKTSRVYSVRG 446 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 +I + + ++ + FE+A S + + + A ++++++ ++ + + +L+P Sbjct: 447 VINTIEEKHDLALMAFEKAVKLSPNDLTTRHQFATFYYYSKQYKKQLEQAEIAYRLDPLS 506 Query: 406 RKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 + Y ++N E E+ H++ Sbjct: 507 FATA------NSYFNALIENG---KINEGENLLHKI 533 >UniRef50_Q98LH3 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98LH3_RHILO Length = 626 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 91/311 (29%), Gaps = 15/311 (4%) Query: 101 FSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM 158 + F + + ++SIA+ PF + L + I + G + Sbjct: 188 LVLEKFSQPLAPPD--NHSIAVLPFINMRGDSEQEFFTDGLTEDIITDLSNVSGFFVIAR 245 Query: 159 AAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAK---NLFLIASNHL 214 +T + Y + G ++N + ++LI+A N Sbjct: 246 NSTFAYKGKPTDVRQISRDLGVKYILEGSARRSNKRLRVNVQLINAGEGGNHVWAERFDR 305 Query: 215 PVDELHNTSQFIIDNILQTVHKPERSVRL-AKQDQGYKNHYLSDEMLAGKKELYDFTPES 273 + ++ + + +++ + +L A+ Y GK + Sbjct: 306 EIADIFDVQDEVTRRVVEAISGKLGEKKLVARSRPSNLEAYDLCVRSRGKCN---NSRSD 362 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 A +R I E + LA + + E AL +I Sbjct: 363 NREACADLER---AIQIDPNYCEAHSNLAISLLFGWIIWGEPQEPGRANALIHAQRAVEI 419 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D I+G + + F+ A + + A + + + + A Sbjct: 420 DPDDSHARRILGCVQLYERNWDEAKSQFDAAVRLNPNNADAVAWMGELQIYLGDPQAALR 479 Query: 394 CIDKSLQLEPR 404 +L++ PR Sbjct: 480 ACGAALRINPR 490 >UniRef50_B4RFP5 Adenylate cyclase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFP5_PHEZH Length = 588 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 52/339 (15%), Positives = 102/339 (30%), Gaps = 18/339 (5%) Query: 77 SLRCIFEKIGYDRCIETIYR--KGYRFSGQVFKTKINE-DNTSDYSIAIFPFTTSLNTLD 133 L F +G + + I R + YR + S SI + PF Sbjct: 150 RLPAHFVDLGLQKL-KNIPRPVRAYRVRPGLGAEPPQSLPLPSKPSIVVLPFENRGGDPA 208 Query: 134 PLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQN 190 L + + I + + + + + + Y + G + + Sbjct: 209 QEYLADAITEDIITALSRWRWFFVIGRNTSFAYKGRTVQAAQVGHDLGVRYILQGAVRRL 268 Query: 191 NAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 N L EL+DA + + E+ + Q V E ++ + + Sbjct: 269 NDRLRLTAELVDAATAANLWTERFD-GEVSDVLALQDRMTEQLVGALEPAMLHTEGARAG 327 Query: 251 K----NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + + D G L T E A+ +F + + LA Sbjct: 328 RKDLADFDALDCFQRGMWHLNKVTEEGCRTALDLFGQ---AVARDPELALGHVGLARARY 384 Query: 307 SLALHGKS-ELELAAQKALELLDYVSDITTVDGKI-LAIMGLITGLSGQAKVSHILFEQA 364 LA++G S + + Q A + D A G L + + Sbjct: 385 GLAVYGWSPDPKAELQAARAAAAEAIRLDPRDAYGHFAASGAALYLHRHREALDEA-KTT 443 Query: 365 KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + A ++ V + + +EA +++SL+ P Sbjct: 444 IALNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRHSP 482 >UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKU4_SHEWM Length = 711 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 46/225 (20%), Positives = 86/225 (38%), Gaps = 7/225 (3%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y + LTQ + +P K L VL L ++ VV +D ++ VW N +V+ Sbjct: 4 QYWVGDFFVDLSRNQLTQKQQSQTLPPKALAVLTCLAKNKASVVSQDELLSHVWPNSVVA 63 Query: 68 DESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFT 126 +L RCI LR G R I+T ++GY V + E N ++ + P T Sbjct: 64 PNTLQRCIAQLRKALGDDGKVQRYIKTHAKQGYSLEVDVHWQQ-PEPNNANKDSSPLPTT 122 Query: 127 TSLNTLD-PLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKP----DY 181 ++ D P ++ + ++IS + + + F S + +P D Sbjct: 123 LAVQVEDSPHQPSKTVSRLISAVIALLIIVFGVIGYQFFPLTASTPLVVKSMQPLTSTDN 182 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFI 226 I + +++ + + + +L E +Q + Sbjct: 183 RELASIYSPDGEYVIFMRYPEVLCTSHLWAKNLATQEEFQLTQDL 227 >UniRef50_Q5LMB3 Adenylate/guanylate cyclase n=1 Tax=Ruegeria pomeroyi RepID=Q5LMB3_SILPO Length = 590 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 96/300 (32%), Gaps = 20/300 (6%) Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSFL 174 ++ I PF + L +V+ ++ + L + + H Sbjct: 187 PAVVILPFDNMSADPEQDFLADGIVEDVTTELSRFRTLTVIARNSAFAYKGSHKDVRQIA 246 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTV 234 Y V G + + +LIDA+ + ++ + + + + Sbjct: 247 EELGVRYVVEGSVRRAGDRLRATAQLIDARTGAHVWADR-WDRTMADLFDLQDELTAAIL 305 Query: 235 HKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 E + +++ + S + G E +T E +A + R Sbjct: 306 SGVEPELGAHERNLARRKPTDSLTAWEMCQKGYSEFTRYTDEGYSQAHAYYTR---AIAA 362 Query: 291 QTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 + LLA + G++ + L+ + +G++ Sbjct: 363 DPDFALPHALLARLAWVKVITGRTRDPAAEISTGLDHAAQAIERDDRLEIGYVALGVLLA 422 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH-----NEKIEEARICIDKSLQLEPR 404 ++G+ + + ++A+ + + A L++ R +++E A +L+L P+ Sbjct: 423 ITGREQDAADALDKAEALNPNNAVLHFGRCHACLFMQRLDCDRLERAART---ALRLNPK 479 >UniRef50_C6B2R4 Adenylate/guanylate cyclase with TPR repeats n=3 Tax=Rhizobium/Agrobacterium group RepID=C6B2R4_RHILS Length = 738 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 41/322 (12%), Positives = 101/322 (31%), Gaps = 11/322 (3%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSF 173 S+A+ PF + L + L + K+ GL+ + Sbjct: 231 RPSVAVLPFINVSGDSEHDHLAEGLTDDLITELSKVSGLFVIARHSVFAIQGSVGKIQDV 290 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNIL 231 + Y + G + + + ++LIDA + + +L +I I+ Sbjct: 291 AAELGVKYVLEGTLQRAGPRLRINVKLIDAVTGLSLWAERYDRQYADLFAVQDDVIGKII 350 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + + + + + + D + ++E + YR D+ Sbjct: 351 SALSVKLSARERDQLARIPTENLEAYDYYMRAEQEGFILRDVDTYRRT--LSFYHKAIDL 408 Query: 291 QTLKTECYCLLAECHMSLALHG---KSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + +A + + + +A + A + + + + ++ L+ Sbjct: 409 DPGFANAHAGIARVAVDVWRNDYNYLWSAAVARKIAYDAAGQALKLDPNNARAHTVLALL 468 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + G+ + A + A AL+ H +A ++K+L+L+P Sbjct: 469 QWVDGRETEAKNSANMAVAMEPNDAEAAANLALILVHTGSSGQAITEMEKALRLDPSPAS 528 Query: 408 AVVIKECVDMYVPNPLKNNIKL 429 + + + Y + I L Sbjct: 529 SFQLLAGIVFYTAGDDQRAISL 550 >UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein n=2 Tax=Shewanella RepID=Q12IZ6_SHEDO Length = 580 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 71/404 (17%), Positives = 133/404 (32%), Gaps = 44/404 (10%) Query: 7 FSYHFLEGLTLTEDGILTQGNE-QVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + Y F + T G L + ++ +V +P +L VL E+A +V ++ ++E VW +++ Sbjct: 16 YRYQFNDLTLNTRLGTLVRDDKLEVRLPWLSYRLLSVLCEAAPGIVSQEQLLEKVWPDVV 75 Query: 66 VSDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 V DE+L + I LR + IE I +GYR QV T + Sbjct: 76 VGDETLKQRIKLLRRALNDDAHTPIYIEAIRGRGYRLLPQVIVTSEVTPTR----MTSLD 131 Query: 125 FTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVT 184 + + + L +++ + L F + L P Sbjct: 132 LANDTHVMPEDGKSYPLFWKLTSLSLAALMLIFALVALFI-SSGDNLAKLDENAP----- 185 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLA 244 + LY++ +D + D LH F + Sbjct: 186 SSLASPGFDVELYLKGLD------YYHRYREADNLHAIELFTSALAIN-----------P 228 Query: 245 KQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAEC 304 Y LSD G ++ F +++ I D + + Y L Sbjct: 229 NLALAYSG--LSDAYSQG---VFQFNAPRLWQQKAI-DAAYKAIALDPNLAQAYKSLGLA 282 Query: 305 HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQA 364 + + KA+ + + +G I GQ S + +A Sbjct: 283 YYNKGWLN---------KAINANVKALQKQANYHEAMTNIGFIYREMGQLSKSMMWINKA 333 Query: 365 KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 S + + ++A E +A++ +D++L L+P A Sbjct: 334 LTLSPNHSVSCVHKAQSLIALEDFPKAQLWLDRALSLQPDSLLA 377 >UniRef50_A1ZY11 Adenylate cyclase; Cya3 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY11_9SPHI Length = 579 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 117/314 (37%), Gaps = 17/314 (5%) Query: 119 SIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFCNDHISQNSFLS 175 S+A+ PFT +D + + + I N ++ G+Y ++ +F ++ Sbjct: 6 SVAVLPFTNMSGHIDNEYFSDGITEEIINRLAQVQGIYVTARTSSFSFQGKNLDVRQIGK 65 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKN--LFLIASNHLPVDELHNTSQFIIDNILQT 233 + Y + G + + + +L++ + + ++ I I Sbjct: 66 KLNVAYILEGSVRRAGNKVRIAAQLVNTQQGFHEFSEVYDRDLQDVLGVQDEIALLIANK 125 Query: 234 VHKPERS--VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + +++ KN D L LY+ TP+ +A ++ ++ ++I+ Sbjct: 126 LKDELINLPLKMPFTTSYPKNAQAYDWYLQANHILYNCTPQDFPKAEKLYQKI---TEIE 182 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV--DGKILAIMGLITG 349 Y LA C + A + A KA ++ + DG ++ +G Sbjct: 183 PDYAPAYSGLARCFLYYAAIQAFPPKEAFAKAKAYALKALELDSTLIDGH-ISYLGCTFW 241 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP----RR 405 + + + + A ++ A++ NE+ EEA + ++QL+P R Sbjct: 242 QNWDIDTALLHINKTIQKIPGSAEIHAGHAMLLLVNERFEEALASMKLAIQLDPFSPHVR 301 Query: 406 RKAVVIKECVDMYV 419 +A V C++ Y Sbjct: 302 HRAGVAYYCMERYH 315 >UniRef50_A4A7B5 Adenylyl cyclase class-3 family n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7B5_9GAMM Length = 741 Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 96/306 (31%), Gaps = 13/306 (4%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFC 164 D SIA+ PF D + + + N ++DG+ ++ F Sbjct: 135 VAAATPPVQDASIAVLPFADLSPDGDQEYFADGISEELLNVLAQVDGMKVAGRTSSFAFK 194 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHNT 222 + + + G + + +LI + F + S + ++ Sbjct: 195 GRNEDLREIGQVLNVAHILEGSVRSQGDKVRVTAQLIQVSDGFHLWSQTYDRDLSDIFAV 254 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIF 281 I IL + S + + + + L + + ++ RA+ + Sbjct: 255 QDDIAQQILVAMTDELMSDKAPSIAPAARTDISAFNLFLEARDLISTRDEAAMQRALELL 314 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALH----GKSELELAAQKALELLDYVSDITTVD 337 ++ +I Y A+ + L+ G + A A +D + + Sbjct: 315 NQ---AIEIDPTYAPAYASRAKAYTLLSDRPGSYGSIPAKEALAHARANVDKALALDSKL 371 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 A+ GLI +G+ + +A + + + L N ++ + + Sbjct: 372 ADAYAVQGLINADTGRPDFAVSSLRRAIELNPNSLDARNWLGLALSFNGRLRDVADQLKT 431 Query: 398 SLQLEP 403 + ++P Sbjct: 432 LVDIDP 437 >UniRef50_A8TWN7 Adenylate cyclase cya3 n=4 Tax=Alphaproteobacteria RepID=A8TWN7_9PROT Length = 681 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 51/306 (16%), Positives = 100/306 (32%), Gaps = 11/306 (3%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT 161 T SIA+ PF + L L I K+ L+ + Sbjct: 279 PDTATGTAGTPGRRASIAVMPF--LEQPVARGGLADGLTHDIIARLAKLRSLFVIARGSV 336 Query: 162 NFCNDHISQNS-FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDE 218 + + R DY +GR+ + + +EL++A++ ++ ++ P+++ Sbjct: 337 FTLAEQGTLPEEAARRLNVDYVASGRVRLDQRQVVVDVELVEARSGRIVWADTFDQPLED 396 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRA 277 I + I+ ++ + + N + + G +Y FT + +A Sbjct: 397 ALILLDEIGNRIVASIANEVETAERNRALLKAPNSLDAWEAYHRGLWHMYRFTKDENAQA 456 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 F Q + + + L+ H A + + + +A D Sbjct: 457 RHFF---QMAVRLDPTFSRAHAGLSFTHWQSAFQQWDDRDQQSDQAFAAAGQGLLADEHD 513 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 MG L G+ S + E+A S + A +Y + V + A D Sbjct: 514 PAAHWAMGRALWLRGRQDGSLVELERAVELSPNFALGHYALSFVQSQSGDPLAAIRASDH 573 Query: 398 SLQLEP 403 S L P Sbjct: 574 SRHLSP 579 >UniRef50_B7RJ20 Adenylate cyclase Cya3 n=2 Tax=Proteobacteria RepID=B7RJ20_9RHOB Length = 415 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 84/259 (32%), Gaps = 27/259 (10%) Query: 87 YDRCIETIYRKGYRFSGQVFKTKINEDNTS---DYSIAIFPFTTSLNTLDPLILNQELVQ 143 +R ++ I RK F + + + SIA+ PF + D +V+ Sbjct: 157 GERVLKNIARKVRVFRWPDTQARDAPQRLALPDKPSIAVLPFDNMSSDPDQEYFADGVVE 216 Query: 144 IISN--KKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL 200 ++ +I + + + H++ Y + G + + + ++L Sbjct: 217 GLTAALSRIGSFFVIARNSAFAYKGRHLNVIDIGRELGVGYALEGSVQRAGGKLRITVQL 276 Query: 201 IDAKNLFLIASNHLPVDELHNTSQFIID----NILQTVHKPERSVRLAKQDQGYKNHYLS 256 ++ HL ++ + D Q + S++ A+ D+ + Sbjct: 277 VETTT-----GAHLWAEKYDGADSELFDLQDRITEQVAGALQPSIQKAEIDRSTRKRPHD 331 Query: 257 ----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG 312 D + + ++ E +A+ + ++ I L A C +++ Sbjct: 332 MGAYDYAMRAMRHVWMQEKEESAKALVLLEK---ALQIDPEYPLALALSAWCWSQHSVYN 388 Query: 313 KSE-----LELAAQKALEL 326 S+ A Q A + Sbjct: 389 WSDDIVAVKARALQMAEKP 407 >UniRef50_Q6W140 Probable adenylate class-3/4/guanylyl cyclase n=4 Tax=Rhizobium RepID=Q6W140_RHISN Length = 769 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 53/348 (15%), Positives = 107/348 (30%), Gaps = 31/348 (8%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT-NFC 164 ++ SIA+ PF + + I K+ G++ +T + Sbjct: 224 PRMALPLPQKPSIAVLPFENLSSDAGQSYFADGMTDDVITELSKLSGIFVIARNSTFAYK 283 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNT 222 Y + G + + + +LIDA + + + + + Sbjct: 284 GKPTKVQQVAKELGVHYILEGSVRREGNHVRVNAQLIDALDGHHLWAQRYDGEMSGVFGL 343 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS------DEMLAGKKELYDFTPESIYR 276 +I I+ T+ SV+L ++ + D +L G L T + Sbjct: 344 QDRVIGQIVSTL-----SVKLTSAEKSVAAVPETINPRAYDTLLQGWDHLRRDTEAEMAM 398 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALH--GKSELELAAQKALELLDYVSDIT 334 A Q + + Y LA + ++ S E A++ L + Sbjct: 399 AAA---FFQKAIVLDPSYSRAYASLAAANWRTSILSWNFSRREAASRNLDRNLAKAMEKP 455 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 T AI + G+ + ++A + + + A V EA Sbjct: 456 T--PLAYAISAQLLAQQGRYDEAFAAIDRAMKLAPNDPDNHVSMARVLNATGHAAEAEQQ 513 Query: 395 IDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVI 442 + +++++P KA + V ++ Y E RVI Sbjct: 514 VRLAMRIDPHPPKATLRMLAVSLFSQGK--------YNEAADTLERVI 553 >UniRef50_Q1IP04 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP04_ACIBL Length = 736 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 43/315 (13%), Positives = 106/315 (33%), Gaps = 14/315 (4%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN 162 V + S+A+ F T D + + I +I L+ +A Sbjct: 299 VAAEPKAVSEQAAKSLAVLYFENPGGTKDDEYFRDGITEDIITELSRIKDLWVLTRSAVM 358 Query: 163 FCNDHISQN-SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDEL 219 D + + + + + G + ++ A + L++ + + ++++ Sbjct: 359 AYRDKPAASVEVGKQLNAAHVLEGSLRRSGAQLRITARLVETATARSVWAERYDRKLEDV 418 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQG-YKNHYLSDEMLAGKKELYDFTPESIYRAM 278 I +I + + ++ + D L G++ Y F +S A Sbjct: 419 FAIQDEIAQSIAKALKLMLTEQEKRAIEKAPTADVQAYDYYLRGRQFYYQFRRKSFDYAR 478 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAEC--HMSLALHGKSELELAAQKALELLDYVSDITTV 336 +F R I Y +++C H+ + G ++ A+ A ++ Sbjct: 479 QMFAR---AIVIDPTYARAYAGVSDCCSHLYMYWGGSADDLKEAEAASR---KAVELDPE 532 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 + GL + + + + F +A + + YY+ A + F +E+A + Sbjct: 533 LAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFEAYYFFARLCFQRGNLEKAADLFE 592 Query: 397 KSLQLEPRRRKAVVI 411 ++ P + ++ Sbjct: 593 RARLANPEDYQTPIL 607 Score = 44.4 bits (103), Expect = 0.009, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 5/133 (3%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 F ++ +A +F+R + + LLA+ SL H E + A +A++L + Sbjct: 579 FQRGNLEKAADLFERARLA---NPEDYQTPILLAQTLESLERH--LEAKAARARAMKLFE 633 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 ++ D + L + + Q + +A D ++ Y A + Sbjct: 634 RHVELHPEDARALYLGASGLIDAKQMDRALDWTNRALSIDPDDPAVLYNVACSYAKLAMS 693 Query: 389 EEARICIDKSLQL 401 E+A CI+K+L L Sbjct: 694 EKAMDCIEKALAL 706 >UniRef50_C8SMN4 TPR repeat-containing protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMN4_9RHIZ Length = 593 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 47/324 (14%), Positives = 99/324 (30%), Gaps = 18/324 (5%) Query: 94 IYRKGYRFSGQVFKTKINEDNTSD--------YSIAIFPFTTSLNTLDPLILNQELVQII 145 I R+G S +IA+ PF + D + + + I Sbjct: 171 IARRGGNLSPPPALMAAIPSVNGRQNVSLKGPPAIAVLPFQSDGGERDVGYMADGIAEDI 230 Query: 146 --SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELID 202 L ++ F +D + + Y V+G + +N+ L L D Sbjct: 231 IYGLSNRRWLSVIAKNSSFQFRDDTLGTRVIGNALGARYIVSGTLMRNDERIRLTTSLAD 290 Query: 203 AKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEM 259 N L+ S + ++ N I I+ + K A+ Q + + Sbjct: 291 VSNGRLVWSQRFDRALADIFNLRDEIGAEIVSILDKEVDRAEQARTFQVPWESLETWQLV 350 Query: 260 LAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA 319 G+ + T A+ F++ + + LA + A + + Sbjct: 351 RRGRWHMNRRTRGDTEIALEFFEKAYRE---DPNSSAVLNELAWWYFWRAWLRFGDSDD- 406 Query: 320 AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRA 379 K + + ++D + A +G++ + G+ + E+A + A + Sbjct: 407 LDKVKQYSRKALLMDSLDARPHAHLGVMDIMRGRPASAVDHLEEALHINPSFAFAHSAMG 466 Query: 380 LVHFHNEKIEEARICIDKSLQLEP 403 A ++ +L P Sbjct: 467 SARLLLGDAAGAIPFFVETERLSP 490 >UniRef50_B0UEE6 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UEE6_METS4 Length = 597 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 109/316 (34%), Gaps = 20/316 (6%) Query: 105 VFKTKINEDNTSDY---------SIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGL 153 V + + D + SIA+ PF T + L I++ + + GL Sbjct: 181 VLGHQPDTDPAARPLRRLKAKVPSIAVLPFRTEGREAGSDYIGMGLANDLIVALQSVRGL 240 Query: 154 YTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN 212 ++T + + + Y ++G + N A + L D + +I ++ Sbjct: 241 LVISRSSTLPYQGRGVDRRRVSRELGVRYVLSGSVAVNGARLRINASLADQETGVVIWAD 300 Query: 213 HL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDF 269 ++ I IL ++ R L + + N + +L +Y Sbjct: 301 RYDGSTADIFALQSRIATRILWSIAPHVREAELKRALRKRSENRNAYELVLQAVDAMYLM 360 Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH-MSLALHGKSELELAAQKALELLD 328 +A + + + A H ++A +++ A++A L Sbjct: 361 RSPEFPKARELLQDAMRADET---YATSFAYAALWHIHNVAQGWAADVGSEAEEATRLAV 417 Query: 329 YVSDITTVDGKILAIMGLITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEK 387 + DG LA+ G L + + ++FE+A S A + + V+ + + Sbjct: 418 AAIERDPADGFALAVYGHTKALFFREYANAMLIFERALEASPGNAMAWTLSSGVYGYVGQ 477 Query: 388 IEEARICIDKSLQLEP 403 E A ++ L++ P Sbjct: 478 GEAAVTRAEQGLRISP 493 >UniRef50_C3MIJ5 Adenylate cyclase 3 n=7 Tax=Rhizobium RepID=C3MIJ5_RHISN Length = 635 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 100/299 (33%), Gaps = 15/299 (5%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHIS 169 + + SI + PFT + + + + + I KI L+ + + Sbjct: 198 ETGYELSIGVLPFTNMSHDPEQEYFSDGITEDIITDLSKISRLHVVARNTVFTYKGKAVK 257 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDN 229 + + G + + + +LIDA + ++ D L + I D Sbjct: 258 VKQIAQELGVRFILEGSVRKVGERVRITGQLIDAHTGGHLWADRYDRD-LTDIFA-IQDE 315 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLS-----DEMLAGKKELYDFTPESIYRAMTIFDRL 284 I + R L ++ + ++ + L G++ + +T + A +F Sbjct: 316 ITHAIVDQLRIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTRPYLLLARRMF--- 372 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 ++ Y +AEC A+ E + + ++ + + A Sbjct: 373 LKAVELDANYARAYAGIAEC--ECAIRDWHEKDFPLESIFDMSAKALALDPNLAEAHASR 430 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 GL +GQ + + F QA S + Y F + +EA ++ ++ P Sbjct: 431 GLALTHNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKRAAEIRP 489 Score = 54.8 bits (130), Expect = 7e-06, Method: Composition-based stats. Identities = 33/232 (14%), Positives = 65/232 (28%), Gaps = 16/232 (6%) Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN-HLPVDELHNTSQFIIDNILQTVH 235 + + Y + + + P++ + + S + Sbjct: 366 LLARRMFLKAVELDANYARAYAGIAECECAIRDWHEKDFPLESIFDMSAKALALDPNLAE 425 Query: 236 KPE-RSVRLAKQDQGYKNHYLSDEMLAGKKELYD---------FTPESIYRAMTIFDRLQ 285 R + L Q + + LA LY+ F A+ F R Sbjct: 426 AHASRGLALTHNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKR-- 483 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 ++I+ L C++SL + SE + A+ +E + + Sbjct: 484 -AAEIRPDDYFSPIHLLNCYLSLGVD--SERQRWARIGIERAKAALERHPENASPAHRGA 540 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 L G+ + +A D Y A VH + E A ++ Sbjct: 541 LALAHLGEGDRAKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLLEA 592 >UniRef50_B7LR88 Putative uncharacterized protein n=1 Tax=Escherichia fergusonii ATCC 35469 RepID=B7LR88_ESCF3 Length = 173 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 55/153 (35%), Positives = 86/153 (56%), Gaps = 9/153 (5%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N+ S + E + +G+L +++VY+P KE GVL VLL++ H+V K+ II VW N Sbjct: 8 NEHSLYMFENFLFSSEGVLRCKDKEVYLPPKEAGVLTVLLKNYRHIVSKEKIINDVWNNA 67 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 VSDESLTRC+Y LR K IET+Y +GY+ + V T ++ + + Y Sbjct: 68 -VSDESLTRCVYILRNALGKDNK-HLIETVYNRGYKINATV--TVVDGSSQTKYEELYHN 123 Query: 125 FTTSLNTLDPLILNQELVQIIS---NKKIDGLY 154 F N D + ++ L+++++ KKIDG + Sbjct: 124 FPHQQN--DCIKISNTLIKLLALIDAKKIDGQF 154 >UniRef50_A6UKN0 Adenylyl cyclase class-3/4/guanylyl cyclase n=6 Tax=Rhizobiaceae RepID=A6UKN0_SINMW Length = 629 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 50/305 (16%), Positives = 95/305 (31%), Gaps = 15/305 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCND 166 + S+A+ PF L L + I + +T + Sbjct: 209 PTATVSGKPSVAVLPFDNYGGDEATGRLADGLTEDIITDLARFPEFKVIARNSTETYKGK 268 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQ 224 I + V G I + + +LID+K + S P E+ Sbjct: 269 AIDVREIGKALDVGFVVEGSIAREADRVRVTAQLIDSKQGRHLWSQRWDRPDKEVFVIQA 328 Query: 225 FIIDNILQTVHK----PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 I + I + + S R+A + N + L G + L ++ A+++ Sbjct: 329 EIAEQIANRLGGGAGLVQESGRIAAHRKVPGNLNAYELYLLGTERLEQLDQANLEAALSL 388 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 + + L H LA G E E A + + D + Sbjct: 389 LTQ---AVQSDPGLARGWVELFHTHDLLAGLGI-EPERNRALADAAAERALTLDPSDPEA 444 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR-ALVHFHNEKIEEARICIDKSL 399 A+ G G+ G + +E A + + A + + K E +++++ Sbjct: 445 HAVYGSSLGMRGDFARAEAEYEAALRMAPNAAEILIFYIGWASTF-GKPERGADLVERAI 503 Query: 400 QLEPR 404 QL+P Sbjct: 504 QLDPN 508 >UniRef50_Q01U02 TPR repeat-containing protein n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U02_SOLUE Length = 671 Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats. Identities = 50/351 (14%), Positives = 117/351 (33%), Gaps = 18/351 (5%) Query: 68 DESLTRCIYSLRCIFE----KIGYDRCIET-IYRKGY--RFSGQVFKTKINED-NTSDYS 119 D + LR + G + I + R GY F + ++ + + Sbjct: 139 DPVVRVEARRLRDRLKTWYEGEGRNARIRIELPRGGYAPLFHDPAAASAPKQELAPAQRT 198 Query: 120 IAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLSR 176 +A+ PF + + L L + + S K+ L +A + + Sbjct: 199 MAVLPFANLNPSPENDYLCDGLTEELIHSLTKVRELRVVAWISAARMRGREQDLGAIREQ 258 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTV 234 + + G I + +LI++ + + + S ++ + I I+ T+ Sbjct: 259 LGVETILRGSIRCLGDRLRITAQLIESASGYYLWSEAWDRSTSDVFAIEEEIAQAIVNTL 318 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 + + N + L G+ +PE + + F+ + + Sbjct: 319 RVQLWPESPTRLTRKATNIECYNAYLKGRFHWNKRSPEGLRLGLRCFE---DAVALDPDW 375 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSGQ 353 + L + LA +G E A A + + + + A +GL+ + Sbjct: 376 ALGWAGLGDSFAVLAENGLLPQETAIPAANRAAERATSLDPNLAEAYATLGLLRCRYDWK 435 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALV-HFHNEKIEEARICIDKSLQLEP 403 + + F +A + A+ +++ ++EEA + ++ L+P Sbjct: 436 WDEAAVFFRRAIDLNPGYATAHFWYGFHYLAMTGRLEEALAEAELAVSLDP 486 >UniRef50_Q1YFU6 Putative adenylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YFU6_MOBAS Length = 594 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 101/301 (33%), Gaps = 9/301 (2%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPM-AATNFCND 166 D + S+A+ PF +V+ ++ ++ +A + Sbjct: 182 AVPDPHTQPSVAVMPFDNLSGDPGRNNFIDGMVEEVTASLARVREFLVIARQSAATYRGK 241 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQ 224 + + Y + G + ++ + + L+D + I S + +D+L Sbjct: 242 SLGAKEIAAELGVRYILQGSVRFSDRRMRVSLHLVDGETALQIWSERIDAEIDDLFQVQD 301 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDR 283 +I + + +H R + + + ++ ++ D ++ L+ + A+ + D Sbjct: 302 YIAETVSGALHPTIRRAEIERARRRPPDNLVAYDLVMQALPHLWAHRHDENDLAIGLIDE 361 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 H++ + +AL LD D L Sbjct: 362 ALALEPDNGRAAAIGAWAHAQHIAYNWANDIGEQRTRGRAL--LDRTPGRIDDDPLALTA 419 Query: 344 MGLITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 + T L + ++ L ++A + A + R + + ++A C ++SL+L Sbjct: 420 VATATMLIEADLERANALLDRALDLDVNHAWAWTRRGFARVYAGQPDDAFACFERSLRLS 479 Query: 403 P 403 P Sbjct: 480 P 480 >UniRef50_Q2SFI0 FOG: TPR repeat n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI0_HAHCH Length = 741 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 68/443 (15%), Positives = 140/443 (31%), Gaps = 71/443 (16%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + + E L + ++ + K + L+ L+E+ G + ++ + E +W + D Sbjct: 12 FKIGDWWVDPEANKLADQDCEISLTPKAMTALLALVEAQGRSLGEEQLQEKIWSSSAQPD 71 Query: 69 ESLTRCIYSLRCIFEKIGYDR-CIETIYRKG--YRFSGQVFKTKIN-------------- 111 S+ + I LR F G R IE R G YR Q+ + ++ Sbjct: 72 ASVDQIISQLRKAFGDNGRPRRYIE---RDGSTYRIVAQMSQPDVDGLCPHSHAKGRRRG 128 Query: 112 -----------------------EDNTSDYSIAIFPFTT--SLNTLDPLILNQELVQIIS 146 + + I ++P + + D L + I Sbjct: 129 LCKWGISVGALALVFALGFGVFYPKSQAPSQIIVYPIQLVDASHHRDSAYLATSVTDAIR 188 Query: 147 NKKIDGLYTYPMAATNFCNDHI-SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN 205 ++ L T A F S+ S V+G + + L + + D Sbjct: 189 SR----LATLGGARVVFSETAPWSRPDRGSA------VSGSLQITGSSLRLILNITDLAG 238 Query: 206 -----LFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEML 260 LI + H + + L + R + D L Sbjct: 239 RDSQWSGLIEGEVRKLYSFHQDLSEALLSQLNVPNDEFSDRREPDPE-------AYDYYL 291 Query: 261 AGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAA 320 G+ S+ RA+ F + + Y L + + L+++ + Sbjct: 292 QGRHYWSQRDVHSLQRALQNFSQ---AISLDGQFAPAYVALCDSYHFLSVYSDMPASTVS 348 Query: 321 QKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRAL 380 +K LLD + + A L G+ + +++A + + A Y + Sbjct: 349 EKCAPLLDRAFALNPGMPQAYASRALQFSEQGRESEAEGFYKKALEMAPNYAPAYLWYGQ 408 Query: 381 VHFHNEKIEEARICIDKSLQLEP 403 + + ++ +++L+LEP Sbjct: 409 LLRSQGRFIQSLAMYEQALELEP 431 >UniRef50_Q0BZ36 TPR domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZ36_HYPNA Length = 522 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 64/406 (15%), Positives = 132/406 (32%), Gaps = 27/406 (6%) Query: 32 IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCI 91 + + + VLI L + VV +D +I W + VS++++ RCI LR + G I Sbjct: 44 LEPRVMQVLIALASPSAEVVTRDELIARCWNGLAVSEDAIQRCIGRLRRLARDRGSFE-I 102 Query: 92 ETIYRKGYRF---SGQVFKTKIN------EDNTSDYSIAIFPFTTSLNTLDPLILNQELV 142 T+ R GYR + + + + + + PF+ L Sbjct: 103 VTVPRVGYRLLPDAAPMPRETSDRLKGHTRSPAPQLLVDVEPFSNLTPDETVSRFATLLF 162 Query: 143 QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELID 202 I + + Y +TG + + + + +++ Sbjct: 163 DDI---------VIALTL----HRDFVVRLAGPAQTDAYRLTGNLRPDGNHIQVSLRIVN 209 Query: 203 AKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAG 262 + +I + D + + D +LQ + A+ D+ + A Sbjct: 210 -SDGAVILARRFEAD-WNGEAPPSDDFVLQVSGALSSEILRAETDRALRKSADLTAWEAV 267 Query: 263 KKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQK 322 + + ++ S+ + +I E + LA G + A++ Sbjct: 268 VRSVSAYSSISVGNLDFAISEARRGLEIDPAYAEAHAALANALAGKFEVGGGLDQALAEQ 327 Query: 323 ALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH 382 A +D + +LA + G+ + E A + + Y V Sbjct: 328 AAREIDLALTLGRDRPDVLARAATALSMIGRPAEALPYAEDAVAMNPGGGIGHLYLGRVL 387 Query: 383 FHNEKIEEARICIDKSLQLEPRR--RKAVVIKECVDMYVPNPLKNN 426 N + E+A + + QL P R ++ V +++ LK Sbjct: 388 MRNGEPEKAIFHLSRFEQLSPSSPLRYFSTFQKSVALFMQGDLKGA 433 >UniRef50_Q021X4 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021X4_SOLUE Length = 850 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 15/303 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYP-MAATNFCND 166 N +T +SIA+ PF S + I +I L + F Sbjct: 384 PNRADTGMWSIAVLPFENSSGDPGQEYFADSMTDAVITELARIRSLRVISLTSVMPFKGG 443 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD-----ELHN 221 + G + ++ + + L++A + S + L Sbjct: 444 GRRLPEIARSLRVGAIAEGSVQRSGDRARITLRLVNAARDRQVWSGTFEREIRNVLALQR 503 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIF 281 + + + ++ VR ++ + + Y + L G+ L+ + + +++ +F Sbjct: 504 QAAAAVASEIRATLTDSDRVRASESPRVNVDAYET--YLKGRHALFRSSVGDLQQSIQLF 561 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 + I Y LAE +M+L+ E A KA ++ + + Sbjct: 562 HQ---ALGIDPRYALAYAGLAESYMTLSGMYLRPRE-AMPKAKAAAQRALELDSDLAEAH 617 Query: 342 AIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 IMG+I G + + F++A + + A + + + + + + Sbjct: 618 FIMGVIQGSYEFDWRRAEDEFKRALDLNPNNALAHLWYGQSLVATGRSHDGIEQVRIAHD 677 Query: 401 LEP 403 L+P Sbjct: 678 LDP 680 >UniRef50_Q1IQW3 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQW3_ACIBL Length = 737 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 46/338 (13%), Positives = 115/338 (34%), Gaps = 24/338 (7%) Query: 76 YSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPL 135 LR + G + + + + + + SIA+ PF + + Sbjct: 252 ADLRRLQRDGGTASV-----------AAAMPAQRARKTSKAIDSIAVLPFKNATGDAELE 300 Query: 136 ILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNA 192 + + + + + + + P + F ++ S + +TGR+++ Sbjct: 301 YIGEAIAEGVLDGLSHLPKVRIVPRSKAFRFRDEAEDPQSVGKKLDVRAVLTGRVSKRGD 360 Query: 193 VNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPER-----SVRLAK 245 + EL+D + V++ + + I + + + P + K Sbjct: 361 QLNIRAELVDVAKDAQLWGAQFSRTVNDAPDLHEEIAKRVAEKLEGPSSAGSKGGKKSEK 420 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 + N L G L +T + + + + + D++ E Y +A + Sbjct: 421 VETTSVNKEAQALYLRGSHHLNKWTADGVQLGIEL---CKQAIDLEPTYAEPYAAMAMSY 477 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + G + EL+ ++A L + + A + ++ + + + E+A Sbjct: 478 AVSGVLGSLDAELSQRQAKALGQKALQLNEALPEAHAALAIVCYFTFELSAAVRFGERAI 537 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + D+ Y A+ +IEEA + ++ +P Sbjct: 538 ELAPDLPIARYALAMGLSTKGRIEEATSILREAADTDP 575 >UniRef50_A3JWJ0 Putative regulator protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWJ0_9RHOB Length = 652 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 60/367 (16%), Positives = 126/367 (34%), Gaps = 19/367 (5%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA 160 V + T ++A+ PF P L L+ I+ + Sbjct: 243 APVKIVPVEVKKTKLATVAVLPFDFFGPEPTPEYLALGLLDQITCHLASYRAPAVISSNS 302 Query: 161 TN-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVD 217 T + N P Y VTG + ++ ++L++AK+ ++ + D Sbjct: 303 TRGYRGQSPDLNQIRRDIDPTYVVTGSVLLQKGEASVSVQLVEAKSSLVLWAGSFVVASD 362 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYR 276 + + Q + ++I +T+ L +L K ++ S Sbjct: 363 TVFSVRQGVAESIARTLMPNVNLAELRTTTTQNDEALGPYHLVLRAKDLIFQLETGSFEL 422 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE-LLDYVSDITT 335 A + + I + LL E + G S+ A +++LE + + Sbjct: 423 AGGLLMQ---AVTIDPTFAAAHALLGEWYALRIWQGWSKQPDADRRSLELHVKRAVALAP 479 Query: 336 VDGKILAIMGLITGLSGQ-AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 DG+I+++MG + Q + LF+QA + + A + ++++ + Sbjct: 480 GDGRIVSLMGHCRMMFDQRHNEALTLFDQAIELTPNDAETLAWSVPTLAYSDQADRGVAH 539 Query: 395 IDKSLQLEP------RRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 + L+L P R + I + + + Y + + S+ I I Sbjct: 540 GKRVLELSPLDPFIFRNEHFLSIALFMTGDYDGAAEKGLSCYRRAPDYSSN--IRMTIAA 597 Query: 449 LKQLTRI 455 L++ TR+ Sbjct: 598 LQRATRL 604 >UniRef50_Q02AP4 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AP4_SOLUE Length = 721 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 98/295 (33%), Gaps = 15/295 (5%) Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNS 172 + SIA+ PF + + L + I + I GL + F + Sbjct: 263 ATPSIAVLPFANLSPDKENEYFSDGLTEEIISALSHIPGLKVIARTSAFAFKGRNEDVRR 322 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDA--KNLFLIASNHLPVDELHNTSQFIIDNI 230 + + G + ++ + ELI+A + ++++ I I Sbjct: 323 IADTLGVTHMLEGSVRRSANRIRVTAELINACDGSHQWSERYDRQLEDVFAVQDEIAVAI 382 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 +T+ ++LA + + + +++L + L ++P++ + ++ Sbjct: 383 ARTL-----RMKLAAAPRAHTPKLAAYEQLLMARHYLGKWSPDAAAKGQECL---KHAIA 434 Query: 290 IQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 + C LA L + AA + I + A++G + Sbjct: 435 LDPSFAVARCELAWFLFVLVSENRLSPSEAAALMKTEAEEALTIDPSLPEAHAVLGAVAV 494 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRAL-VHFHNEKIEEARICIDKSLQLEP 403 L + FE A S+ + +L ++ EA ID+ L +P Sbjct: 495 LDYNWAEAGRRFELAMSRDPIQPSVRGFYSLFYLAPMGRLREAEEQIDRLLNEDP 549 >UniRef50_C3KMT2 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KMT2_RHISN Length = 743 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 43/313 (13%), Positives = 96/313 (30%), Gaps = 18/313 (5%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 + + + ++ + SIA+ PF + + + +I GL+ Sbjct: 215 TASIARAELALPD--KPSIAVLPFANVSDDPRQEYFADGMTDALVTELAQISGLFVIARN 272 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PV 216 +T + ++ Y + G + + + +L+DA++ + + Sbjct: 273 STFTYKGRAVTAAQVSGELGVRYILEGSVQRAGEQLRINAQLVDAQSGGHAWAGKFDGTL 332 Query: 217 DELHNTSQFIIDNILQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIY 275 ++ + I + + + + ++A + D L G + TPE I Sbjct: 333 ADVFALQDDVTRGIAEALALRLQPGEQMALGRKETTVPAAFDAFLRGWEHHRRMTPEDIA 392 Query: 276 RAMTIFDRLQNKSDIQTLKTECYC-----LLAECHMSLALHGKSELELAAQKALELLDYV 330 +A+ F+ L A + E A K L Sbjct: 393 KAVPYFEEAIALDPAYGRAYAAAAMVYARLYAWRWHYHLGMTRFEARAKASKYLRTAQR- 451 Query: 331 SDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 + GL+ Q + ++A + Y AL + +E Sbjct: 452 ----YKTALAHQVAGLLAEADWQHAQALAELKEAIALEPGDSWSYAMMALTLTSVGRPDE 507 Query: 391 ARICIDKSLQLEP 403 A I +++L+P Sbjct: 508 AIPHIRTAIRLDP 520 >UniRef50_Q89CK6 Blr7791 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q89CK6_BRAJA Length = 599 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/318 (12%), Positives = 102/318 (32%), Gaps = 18/318 (5%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPM-AATNFCNDHI 168 + SI + PF + + ++ +I G A + I Sbjct: 198 PRSPPRLSIVVLPFANLSGDPLQDYFVDGVTESLTTDLSRISGSLVIGRHTAYTYKGKPI 257 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFI 226 Y + G + ++ + ++L+D + + ++ P+ +L I Sbjct: 258 DLKQIGRDLDVRYVLEGSVQRSGDRFRVNVQLVDTETGSHLWADRFDKPLADLFEMQDEI 317 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYD-FTPESIYRAMTIFDRLQ 285 + + ++ + + ++ + L D G +T + +A + F+R Sbjct: 318 VSRLANALNAQLIAAEARRAERSLQPSAL-DFYFQGMALWNKSWTSPHLRQARSFFER-- 374 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD-YVSDITTVDGKILAIM 344 ++ E +A ++A ++ A E + + Sbjct: 375 -ALGLEPDNVEALVGIALVDAAMAGVVFADDPCRYFAASEAASMKALSLDPQHALAHMAL 433 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 G++ + +A+ E+A + ++A + + EE + +L+L PR Sbjct: 434 GVVQVCTQRAEKGVAECERALALNRNLAEAHALFGVAKMLLGHPEEMEGYVRDALRLSPR 493 Query: 405 RRKA-------VVIKECV 415 A + K C+ Sbjct: 494 DDGAHRWLCCVGLAKLCL 511 >UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID=Q988M4_RHILO Length = 168 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 17/153 (11%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F L + +L +G++ V + + LG+LI LLE G +V K ++ VW ++ V + Sbjct: 31 FGPFLLFPKQFLLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARVWPDVFVVPTN 90 Query: 71 LTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 LT I +LR + +R I I +GY+F V SL Sbjct: 91 LTVHISALRRVLRDGRDGNRFIINIPGRGYQFVASVHTP--------------LQRKASL 136 Query: 130 NTLDPLILN-QELVQIISNKKIDGLYTYPMAAT 161 T+ P++ +E +QI + + G Y P A Sbjct: 137 ETMRPIVPALEERLQIQAPSEY-GAYGVPTAGP 168 >UniRef50_A7HAK8 Protein kinase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HAK8_ANADF Length = 784 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 113/306 (36%), Gaps = 12/306 (3%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NF 163 + S SIA+ PF D + L + I + +I+GL+ ++ +F Sbjct: 320 PPRRASAAPSAPSIAVMPFADLSPEKDQEYFSDGLAEEILNALARIEGLHVAGRTSSFSF 379 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHN 221 + ++ + G + + + + +L+D KN + + S + ++ Sbjct: 380 KGKTDDVAAIAAKLHVTSLLEGSVRKAGSRVRITAQLLDTKNGYHLWSQTYDRELTDVFV 439 Query: 222 TSQFIIDNILQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 + I ++++ + K + +G N D L G++ +P S RA+ Sbjct: 440 VQEDIARSVVEALRAKLVPAATARISARGTANAAAYDHYLIGRELRRHPSPGSWRRAIAA 499 Query: 281 FDRLQNKSDIQTLKTECYCLL--AECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 F+R + + L A + E++ ++A E ++ + G Sbjct: 500 FER---AVALDPGYASGWAELGNAWFWYANERSRIEEVDDGKRRAAEAVERAIALAPTLG 556 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRA-LVHFHNEKIEEARICIDK 397 + A+ G I + + ++A + A +Y+ R + + + A + + Sbjct: 557 EAYAVRGTIRAAEQRWSEALADMDRAVSLNPGSADVYWLRGQFLLGPLGRYDAAVEDMRR 616 Query: 398 SLQLEP 403 + L+P Sbjct: 617 TADLDP 622 >UniRef50_B8KJR3 TPR repeat-containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJR3_9GAMM Length = 714 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 48/308 (15%), Positives = 93/308 (30%), Gaps = 15/308 (4%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFCNDHISQN 171 SIA+ PF D + + + N ++ GL + F Sbjct: 136 AGQPSIAVLPFVDMSPDGDQEYFADGIAEELLNVFAQVKGLSVAGRTSAFAFKGKSTDLR 195 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDN 229 + + G + + + +LI A N + + S + ++ I Sbjct: 196 EIAQILDVGHILEGSVRKAGNQIRVTAQLIQADNGYHLWSATYDGELTDIFGVQDSIAKA 255 Query: 230 ILQ--TVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 ILQ T L+ + + + D L K+ D T + + A DR Sbjct: 256 ILQELTPQLLGEDKELSSKVRVSATDLDAYDLYLISKQHASDGTLKGLQAAAGALDR--- 312 Query: 287 KSDIQTLKTECYCLLAECHMSL----ALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 +I A + + G E A +A +D DI L Sbjct: 313 AIEIDPNYVPALVWRAYYELQMSDGEGAWGNIPFEEALPRAKRWIDRAIDIDPESPDALF 372 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 + G + + + + A + A K++E + ++++L + Sbjct: 373 GLASYFGYTNNDEAAVRYYRAAIDVKPNFPVAQNDLAFFLASEGKVKEGVVYLEQALAHD 432 Query: 403 PRRRKAVV 410 P A + Sbjct: 433 PAYVDANL 440 >UniRef50_B5JIE4 Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIE4_9BACT Length = 914 Score = 121 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 95/305 (31%), Gaps = 15/305 (4%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFC 164 T E D SIAI PF + + + I + T + + Sbjct: 307 TPTGEAAPEDKSIAILPFENRSMLEEDRFFTDGIHGDLLTQISHIGEIKTISRTSVIGYR 366 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN----HLPVDELH 220 + + + G + + + ++LIDAK L+ + L + + Sbjct: 367 ETNKNLRQIGDELGVSNILEGDVQRAGEQVRINVQLIDAKTDALLWAEGYTRELSAENIF 426 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFT--PESIYRAM 278 + I + I +H + ++ L LA + Y P S + Sbjct: 427 SIQSEIAEEIAAALHAVLSPQERERIEK------LPTSNLAALEAYYRGIAEPTSTTGYL 480 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 + + ++ + LA H+ +E ++ L++ ++ Sbjct: 481 QKIEHFERAIELDPEFALAHARLAWVHLKQVWMTSLSIEEQVAESEPLINRALELDPESS 540 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +GL+ + S +A + + + A + + E+A + K+ Sbjct: 541 AAYDALGLLWRRKDDFEKSEAALLKAIELNPNNDMAHSTYANELGDHGEYEKALRHVLKA 600 Query: 399 LQLEP 403 +L P Sbjct: 601 RELNP 605 >UniRef50_Q89CQ9 Blr7737 protein n=5 Tax=Bradyrhizobium RepID=Q89CQ9_BRAJA Length = 619 Score = 121 bits (302), Expect = 8e-26, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 88/312 (28%), Gaps = 11/312 (3%) Query: 98 GYRFSGQVFKTKINEDNTSDYSI-AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLY 154 G R + +I + PF + D + L + + + Sbjct: 192 GARAIAPELREASALSQQYRTAIVGVLPFANLSDAQD-EYFSDGLTEDLIHALSLQSFYR 250 Query: 155 TYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH 213 +T F + S Y + G + + A + ELI + + + Sbjct: 251 VLSRNSTFAFKGKNTSTRLIAREIDATYLIQGSVRRAGAKIRVTAELIAPETGEQLWTGR 310 Query: 214 LPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTP 271 D + I N+ + + + + D L G Y T Sbjct: 311 YDRDIGDFFAMQDEITTNLSAAIATEIVRAEASAPARLSTDVTAWDRFLKGLSHYYRQTK 370 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAA-QKALELLDYV 330 E + A+ +F + + + + LA + G + +A+ L + Sbjct: 371 EDLAAAIDLF---REAIAVDPKLSIAHAYLATIQIQSIQFGWVKGTREMWAEAMNLAETS 427 Query: 331 SDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 + +I+ + G + + ++A + + HF + E Sbjct: 428 VRLDPRSSFAFSILSWAHAMEGHYEAAMDAAKRAVALNPYDNGARGVLGICHFVIGEHRE 487 Query: 391 ARICIDKSLQLE 402 A + Q + Sbjct: 488 AIELFSMAAQRD 499 >UniRef50_B7RXI6 Tetratricopeptide repeat domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXI6_9GAMM Length = 642 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 105/316 (33%), Gaps = 12/316 (3%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMA 159 G+ + SIA+ PFT + D L + I N + L Sbjct: 102 IGEASQAAAESSQVDQASIAVMPFTNFSDNKDMGYFGDGLAEEILNLLANLRELNVSART 161 Query: 160 ATNFCND-HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD- 217 ++ + D + + + + G + + + +LIDA+ F I S+ D Sbjct: 162 SSFYFKDRTVDIPTIARHLGVRHVLEGSVRFDGDRVRVTAQLIDAEKGFHIWSDSYDRDM 221 Query: 218 -ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYD-FTPESI 274 + I +++ + S + + D L G+ L E++ Sbjct: 222 SNIFTLQDEIAGEVVKNLEIVLSSSSKGVLARKVSLDPDAYDRYLRGRDYLRQPHDDETL 281 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT 334 RA +F R +I + Y L + + L AA + + + Sbjct: 282 SRAELMFQR---ALEIAPDYADAYAGLCDTLLLWYLVDMDASRFAA--SEDACLQAQTLD 336 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 + + +G + SGQ ++ F +A +T Y + K+ A Sbjct: 337 SRAPTVHVALGNLYRGSGQYALAEREFNEAISLNTSGVDAYVGLSQTFAAAGKLALAEQT 396 Query: 395 IDKSLQLEPRRRKAVV 410 + ++++L+P + Sbjct: 397 LVRAIELQPNNWSVSM 412 Score = 42.1 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%) Query: 314 SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 E A +A EL + I D L+++G G+ + + + A + Sbjct: 527 DERARAYLRAYELAEENLRINPSDAITLSLIGHYLARLGRDEEALKNVKLALELAQKDIY 586 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQL 401 +YY+ A+ +++ A+ D++L L Sbjct: 587 VYYFSAITLSTLNELDRAQQAADEALAL 614 >UniRef50_A4YSP3 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS278 RepID=A4YSP3_BRASO Length = 1015 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 1/116 (0%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + ++ F ++ +L + E++ + K GVL+ L+E AG +V K+ ++ +VW ++ Sbjct: 3 QKTFVFGPFQLDQQNALLRRSGERILLAPKPFGVLVHLVERAGELVTKEELLNAVWSDVH 62 Query: 66 VSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 VS+ SL+ I +LR + R IET+ R+GYRF V D D + Sbjct: 63 VSESSLSVTINALRTALDDNKQSPRYIETVPRRGYRFIAAVEIAHHLADPARDSGL 118 >UniRef50_A5VGJ6 Transcriptional regulator, CadC n=1 Tax=Sphingomonas wittichii RW1 RepID=A5VGJ6_SPHWW Length = 382 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 YHF + + ED L + V + + L L +L+ +AG +V KD + VWK++ V+ Sbjct: 5 GYHFGQFVLDPEDRRLLRDGVPVELNARYLDALALLVRNAGSLVGKDRFLSEVWKDVPVT 64 Query: 68 DESLTRCIYSLR-CIFEKIGYDRCIETIYRKGYRFSGQV--FKTKINEDNTSDYSI 120 DE+LT+CI LR + + IET+ + GYRF +V ++ ++ + +++ Sbjct: 65 DEALTQCIRLLRQRLGDDASRPHFIETVPKHGYRFIAEVDWRESSAPAEDAAPHTL 120 >UniRef50_UPI0001904B06 probable two-component response regulator protein n=1 Tax=Rhizobium etli GR56 RepID=UPI0001904B06 Length = 187 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 7/140 (5%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + E+G L + + V I + +L VLL + G VV K ++++VW + V + + Sbjct: 48 FGHFEFIAENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSKSALMDAVWPGLAVEESN 107 Query: 71 LTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNT------SDYSIAIF 123 L+ I +LR + I T+ R GYRFSG+V D+ + IA+ Sbjct: 108 LSVQIAALRKLLGPASDGGEWIVTVPRLGYRFSGRVESASDGADSGWHARAEPNPGIAVL 167 Query: 124 PFTTSLNTLDPLILNQELVQ 143 PF + L + Sbjct: 168 PFENLGGDAEKQYLADGIAD 187 >UniRef50_B6B7E9 Adenylate cyclase Cya3 n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B7E9_9RHOB Length = 582 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 17/336 (5%) Query: 80 CIFEKIGYDRCIETI--YRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNT-LDPLI 136 F+ +G + + I + YR +G E + + S+A+ PF ++ + Sbjct: 150 AAFDDLGLQQ-VRNIAEPVRIYRITGNSLPALDPEGPSPEASVAVLPFASASPANTETEA 208 Query: 137 LNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAV 193 + Q L + I+ + L A F + + Y G I Q Sbjct: 209 MAQTLTEDITIGLSRFRALRVVSRTAALRFAGSTAGTSIVAAELGVRYLAEGSIRQLPGR 268 Query: 194 NTLYIELIDAKNLFLIASNHLPVD---ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 + + L D + + S D +L + + R Q Sbjct: 269 LRITVTLSDGASGLSLWSGRYDRDLSNDLTQQDALAAQITQTLATQLQSIARQKSAAQAA 328 Query: 251 KNHYLS--DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSL 308 K L+ D ++ K + D + + + T++ + + Y LA ++ Sbjct: 329 KRGALTARDLVMQAKSVILD-SRGRLKQCRTLYQQACDADF---GNAAAYSGLALTYLVE 384 Query: 309 ALHG-KSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIH 367 + G + +L KA LL + + I +D + ++ G ++ F++A + Sbjct: 385 WMSGWATSADLTLDKAFPLLRHAARIDPLDSVAQRRLAVMHLCKGNFTLAEDHFQRALML 444 Query: 368 STDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + +R L + + E+A +D++ P Sbjct: 445 NPNDTDAMAFRGLSLIYQGRPEKALAELDQATAQNP 480 >UniRef50_A6UG63 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 Tax=Rhizobiaceae RepID=A6UG63_SINMW Length = 643 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 97/343 (28%), Gaps = 44/343 (12%) Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNS 172 + ++A+ PF D L + I + + L +T Sbjct: 227 ARPTVAVLPFDDMSGGADQAYFADGLTEDIIANLARNRELQVIARNSTFALRGQAEDIRR 286 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN--LFLIASNHLPVDELHNTSQFIIDNI 230 R Y V G + + +LIDA++ S V+++ + + I Sbjct: 287 IGERLGAGYVVEGSARRAGDQLRVVAQLIDARSGAHLWSRSYDRRVEDIFSVQTELTAEI 346 Query: 231 LQTVHKPERSVRLAK-QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + + R ++ +Q +N D +L + Y + + L + Sbjct: 347 VSHLVSYVRESEVSNAAEQPTENLQAYDLVLQARNR-YKHGSKDAEALIASRALLHRALE 405 Query: 290 IQTLKTECYCLLAECHMSLALH-------------GKSELELAAQ--------------- 321 + L ++ + G SE A + Sbjct: 406 LDPGYAAARASLGMTYIVDFVQNLTGRATVTDVETGLSESRQAVRLDPNLAVGYQVLSFG 465 Query: 322 --------KALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 A++ ++ D L + G + E+A+ Sbjct: 466 LSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRFGSYDEAVQNAERARRLHPMAPE 525 Query: 374 LYYY-RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 Y Y + +++EA + + L PR ++I+ V Sbjct: 526 YYTYVYGQALYAAGRLDEADEVLRECLIRAPREPDCLLIQTAV 568 >UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIZ5_ACIBL Length = 717 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 3/117 (2%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 S+H + + + + N ++ K + VL+ L + V+ K+ +I +VW + VS Sbjct: 4 SFHIADWEVEPQINQVRRQNHSFHLEPKVMQVLVELAAHSDEVLSKEHLIHAVWSDTFVS 63 Query: 68 DESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVF--KTKINEDNTSDYSIA 121 D+ LTRCI +R + + + I+TI + GYR V K ++ +S+ S A Sbjct: 64 DDVLTRCISEIRRVLDDDARAPKIIQTIPKSGYRLIAPVVFDKAAPPKNGSSNGSTA 120 >UniRef50_B2JV68 Tetratricopeptide TPR_4 n=1 Tax=Burkholderia phymatum STM815 RepID=B2JV68_BURP8 Length = 594 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 109/321 (33%), Gaps = 15/321 (4%) Query: 95 YRKGYRFSGQVFKTKINEDNT----SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNK 148 + YR + I + +IA+ PF + +L + + I S Sbjct: 173 PVRAYRIGPPGPRPVIEPGSAFLPDLRPTIAVIPFASRGGEAQQQVLGEVMADEIISSLS 232 Query: 149 KIDGLYTYPM-AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLF 207 + L + T F + + + Y ++G + L +EL +A++ Sbjct: 233 RTAELQVISRLSTTTFRERDATLDEISAFLGARYVLSGAYRSSGDQVVLVVELAEARSRH 292 Query: 208 LIASNHLPVDELH---NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKK 264 ++ + + H + I + + + Q + S +++ Sbjct: 293 ILWTQSVKGRATHIMLGEDELIDRIVAEVSGAIIDRELQRARSQALPSLASSTLLMSAIV 352 Query: 265 ELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKA 323 ++ +RA + + L ++ Q + L + H+ G + AQ A Sbjct: 353 LMHRGVSHDFHRARDMLEALIERAQRQ---ALPHAWLGKWHVLRFNRGWTDDRAGQAQAA 409 Query: 324 LELLDYVSDITTVDGKILAIMGLI-TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH 382 L+ D L I G + T L Q V +E+A + + + + + + Sbjct: 410 LDCTRRALDADADCSLALTIDGFVHTNLLKQLDVGQRRYERALEVNPNDSLAWLLKGTLL 469 Query: 383 FHNEKIEEARICIDKSLQLEP 403 + E+A +++L+L P Sbjct: 470 AFEGEGEQAVDATERALRLSP 490 >UniRef50_Q13CI3 TPR repeat n=5 Tax=Rhodopseudomonas palustris RepID=Q13CI3_RHOPS Length = 584 Score = 119 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 44/301 (14%), Positives = 100/301 (33%), Gaps = 11/301 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAATNFCN 165 ++ + + +IA+ PFT +++ + + I+ +I L +++ Sbjct: 167 SQPPVGFSGNQAIAVLPFTNVTGDEALDYISEGISEELIVGLSRIRWLPVIARSSSFSFA 226 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELH---NT 222 D I + R Y + G + + + L +A + I S + Sbjct: 227 DTIDRKVIGQRLGAHYLIEGHLYRAYDSFGVSASLSEAMTGYAIWSRRFTLQSPAMRGEL 286 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 QF+ + + Q K E + ++ +++ +SD + G+ L T A +F Sbjct: 287 EQFVNELVAQLETKIEHAEQIRIRNKRQDTLGVSDLIWRGRWHLNRLTRADSEMAQKLFA 346 Query: 283 RLQNKSDIQTLK-TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 + LA G+ E + +L S DG+ Sbjct: 347 DALALDPKSPEALIQTTSALAW----SIWAGRQPQEQVL-RMRKLAQQASLADPDDGRGF 401 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 + G+ + + L + A + +A + + + +A + S++L Sbjct: 402 MLAGIAEMWLRHPQEAKNLLQHAIALNPSLALAHAQLGGCYNLAGEPAKAIDHLRASMRL 461 Query: 402 E 402 Sbjct: 462 S 462 >UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vibrionales RepID=A5L3N2_9GAMM Length = 492 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 65/143 (45%), Gaps = 6/143 (4%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 LE + E L + +G + V I ++ +L L + G +D +I +VW Sbjct: 2 LEKNSCFSVDEWLFVPNEGQILFAERTVTIDKRLTKLLEFLCLNPGQTHTRDELINNVWS 61 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 +I+SD+ +T+ ++ LR + ++ I T+ ++GY+F V ++KI D ++ Sbjct: 62 GMILSDQVVTQAVFELRKVLKQNSQQHNSYIITVPKRGYKFEADVIQSKIETDQVAEPE- 120 Query: 121 AIFPFTTSLNTLDPLILNQELVQ 143 P T + + +L Q Sbjct: 121 ---PSTAQPSDPEQSPPADKLPQ 140 >UniRef50_A9DT30 Adenylate cyclase cya3 n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT30_9RHOB Length = 617 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 56/318 (17%), Positives = 108/318 (33%), Gaps = 26/318 (8%) Query: 103 GQVFKTKINEDNTSDY-----SIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYT 155 +V +T NE S + S+A+ PF + + + L I+ K+ + Sbjct: 207 AEVIQTNDNEGLNSKFNNRRSSLAVMPFFAVQSDQPYIEIADGLTHDVIVRLAKLRCISI 266 Query: 156 YPMAATNF-CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL 214 A+ N + R DY TG + Q ++ +EL++ ++ ++ Sbjct: 267 IARASVQALENHGLDPAEAGIRLGVDYVATGTLRQQSSTLRFELELVETSCGSIVWTDVC 326 Query: 215 PV------DELHNTSQFIIDNILQTVHKPERS---VRLAKQDQGYKNHYLSDEMLAGKKE 265 V + L++ +I ++ + + ER+ +R + +H+ G Sbjct: 327 EVTSANLMEALNDLGNWIASALMGEIEQSERNRAILRPPSSLDAWGSHH------RGLWH 380 Query: 266 LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE 325 +Y FT +A F+R + + + + L+ H A S+ + A A Sbjct: 381 MYRFTKHDNAQAQLYFERAKT---LDPTFSRAFAGLSFTHWQSAFQNWSDPVVEANLAYA 437 Query: 326 LLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 D MG L + + ++ S + A +Y A V Sbjct: 438 AAAQSLLADEKDPAAHWAMGRALWLRKKNDAAVFSLRESVDLSPNFALGHYSLAFVESQT 497 Query: 386 EKIEEARICIDKSLQLEP 403 A D S L P Sbjct: 498 GDPHAAIQSSDLSRSLSP 515 >UniRef50_Q124D4 Integral membrane protein-like n=1 Tax=Polaromonas sp. JS666 RepID=Q124D4_POLSJ Length = 607 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 106/309 (34%), Gaps = 11/309 (3%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-A 159 F T +D +IA+ PFT + D +L + L + I + + L + Sbjct: 196 APTFVTLPTDDTELRPTIAVIPFTARTSDPDHAVLGEILAEEIIAALSRTPDLNVISRLS 255 Query: 160 ATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--- 216 + S + Y ++G L ELI+A+ + + L Sbjct: 256 TSALRGRDASLPEVQNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQ 315 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 + LH + + + Q + R+ + N S ++ ++ T R Sbjct: 316 EVLHGEDRITAEVVSQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDR 375 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITT 335 + + L + LA+ H+ G S + ++ALE D+ Sbjct: 376 VREMLEYLIERHRRLP---TPRAWLAKWHVLQVTRGLSSGGKDETKRALEQTQRALDVDP 432 Query: 336 VDGKILAIMGLI-TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 LAI G + + + +E A + + + + + ++H ++ +A Sbjct: 433 GCSLALAIEGFVHCHMLKDLDGAAQRYESALAANPNDSLAWLFSGVLHSFRDEGVKALAA 492 Query: 395 IDKSLQLEP 403 D++L L P Sbjct: 493 SDRALNLSP 501 >UniRef50_B5JPL3 Tetratricopeptide repeat domain protein n=2 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL3_9BACT Length = 783 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 53/314 (16%), Positives = 110/314 (35%), Gaps = 17/314 (5%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAATN-F 163 + SIA+ PF N + + + +I + T + + Sbjct: 162 SVVDPSSEVFEKSIAVLPFDNRSNVDEDQFFTDGIHDDLLTQISRIRDIKTISRTSVMAY 221 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH----LPVDEL 219 + + + G + ++ + ++LIDA I + + + Sbjct: 222 KDTTKNMRQIGEELGVATLLEGGVQRSGDQIRINMQLIDASKDKHIWAETYTREMSARNV 281 Query: 220 HNTSQFIIDNI---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 I D + L++V PE L + + G+KEL T ESI + Sbjct: 282 FAIQSEITDAVAAALRSVLSPEEQEHLKEAPTENLEALEA--FFEGRKELNKRTAESILQ 339 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 A+ F R ++ + Y A C + L H E K L++ + T Sbjct: 340 AIVHFRR---AVELDSSFARAYAQWAICELLLIFHAGRSPEEQVAKTESLIESAFGLDTR 396 Query: 337 DGKILAIMGLITGLSGQAKVSHIL-FEQAKIHSTDIASLYYYRALVHFHN-EKIEEARIC 394 +G+ G ++++ L FE+A + + +Y A + + E+A Sbjct: 397 LEDSYVALGMQERYRGGSRMATALAFEKAVELNPNNIDVYAEYAPFLIWDMGRPEDAVEL 456 Query: 395 IDKSLQLEPRRRKA 408 ++K+ +++P+ + Sbjct: 457 LEKAYRIDPKNAQV 470 >UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPW9_SHEWM Length = 693 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 1/110 (0%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 ++ F L L + + I K + VL LL G VV ++ I +S+W + +V Sbjct: 1 MTFQFANCLVFPAHNKLEIDGQSIKIEPKIMQVLCFLLRHQGQVVSREFIAQSLWPDTVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNT 115 + +TR I+ LR I + IETI RKGY F + + + E + Sbjct: 61 GLDVITRAIFELRKILNDSAQSPQFIETIARKGYCFIYPLEQKSVAEGSV 110 >UniRef50_D2LHL5 Putative adenylate/guanylate cyclase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHL5_RHOVA Length = 598 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 48/313 (15%), Positives = 100/313 (31%), Gaps = 19/313 (6%) Query: 102 SGQVFKTKINEDNTSD---YSIAIFPFTTSLNTLDPLI----LNQELVQIISNKKIDGLY 154 +G V + +A+ PF N LV +S ++ L Sbjct: 186 TGDVACEAAMQPPQGHDRKPVLAVLPFQIHRNGPVDEFCGEVFADSLVNGLS--RLRWLP 243 Query: 155 TYP-MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH 213 ++ F N S Y VTGR+ + + + + LID+ N + Sbjct: 244 VLSQWSSLRFQNGQRSPCEIGRALGARYLVTGRLKLSGSQLDVTVNLIDSSNCHNLWGRT 303 Query: 214 LPVDE--LHNTSQFIIDNILQTVHKP-ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFT 270 +D L + + RL+ + + N + + G L T Sbjct: 304 FALDPTSLAEAQNDFTTAAVSALELERAEFARLSVKKKEDLNPWE--LVRRGTWHLKKLT 361 Query: 271 PESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYV 330 + + A F Q + +E LA CH S + ++ EL Sbjct: 362 EDHLAIAAEFF---QTAVEGDPGSSEALIQLATCHFSDIWMHSRDAA-LLRETEELARKA 417 Query: 331 SDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 + D ++ ++GL+ + + + F+++ + + + + + Sbjct: 418 CLLDPQDARVYLVIGLVKLATEMPERARSYFQRSLELNPSFPAAHCCLGSSYTLAGEPGI 477 Query: 391 ARICIDKSLQLEP 403 A ++++L P Sbjct: 478 AIAHFQRAMRLSP 490 >UniRef50_Q1IRP3 Serine/threonine protein kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRP3_ACIBL Length = 821 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 53/313 (16%), Positives = 102/313 (32%), Gaps = 17/313 (5%) Query: 99 YRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTY 156 Y F G T+ SIA+ PF + N L+ L + S ++ + Sbjct: 343 YFFRGSAVSTQQVT------SIAVLPFVNATNDAANEYLSDGLTGELISSLSQLPNMKVM 396 Query: 157 PMAA-TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH-- 213 + F K +TGRI Q + +L++A + I H Sbjct: 397 ARSTVFRFKGKQDDPQQIGQTLKVAAVLTGRITQRGDTMGIDADLVNASDGSEIWGAHYD 456 Query: 214 LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPE 272 +L I ++ + K ++ + L G++E TPE Sbjct: 457 RKASDLTQVQGDISRDLSNKLKIQVGGADQQKFGSAGTSNPEAYRLYLEGRQEWNGRTPE 516 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVS 331 + +++ ++ R Y LA+ ++ +G + A + Sbjct: 517 GLKKSIDLYRR---AIAADPNYALAYTGLADTYLVATSYGVGITQQQALSVVDDASKKAL 573 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH-NEKIEE 390 ++ + A + + + LF + S A+ +Y+ A KI+E Sbjct: 574 ELDPTLPEAEATRAMALANQWKFTEAEQLFRKTLQRSPGNANAHYFFAFNVLLPIGKIDE 633 Query: 391 ARICIDKSLQLEP 403 A +L L+P Sbjct: 634 ALAEFRTALSLDP 646 >UniRef50_Q89ET6 Blr6986 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ET6_BRAJA Length = 658 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 99/302 (32%), Gaps = 12/302 (3%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAATNFCNDHI 168 + SI + PFT N + + + +S +I+ + + ++ Sbjct: 254 PQPLNHRLSIVVLPFTNLSNASEQEYFAEGITDDLSADLSRIEDSFVIAPSTARAYK-NV 312 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFI 226 Y + G + + +++ + LIDA+ I S + D + I Sbjct: 313 DPKRVGRELGVRYILDGSLRRTDSLVRINARLIDARTGAEIWSERVDGDWSKSMQLQDII 372 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYD-FTPESIYRAMTIFDRL 284 + + + + + N+ + D + G L ++ E + ++ +F+R Sbjct: 373 TGRLARRLDLELTNQESRDAEVMRPNNPDAVDLTMRGWAVLNQPYSREQLSQSRALFER- 431 Query: 285 QNKSDIQTLKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 I + LAE M + ++A + V D + Sbjct: 432 --ALQIDPGFPKALVGLAETLAMEVNYRWTDAPADQLRRAESAVGQVLSKFPSDAMAHFV 489 Query: 344 MGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 G I SG + + +E A + +A + + EA + ++QL Sbjct: 490 RGEIQRASGRNVEAAVGEYEAAIAINPSLAPAHGALGAAKIRVGRSAEAFAPLQMAIQLS 549 Query: 403 PR 404 PR Sbjct: 550 PR 551 >UniRef50_B5JJC9 Tetratricopeptide repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJC9_9BACT Length = 716 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 40/338 (11%), Positives = 101/338 (29%), Gaps = 16/338 (4%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLD-PLILNQELVQII--SNKKIDGLYTYPMAA 160 ++ T + S SIA+ PF + + + + + + L + Sbjct: 154 ELPGTVVPRFEVSSKSIAVLPFANMSEDPEASSFFADGVHEDLLTNLAYVSELSVSSRTS 213 Query: 161 TN-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN--LFLIASNHLPVD 217 + S + G + + + +LIDAK S ++ Sbjct: 214 VMAYRETTKSIRQIGEELGVGNLLEGSVRRAGNRVRVTAQLIDAKTDEHIWAQSYDRNLE 273 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQD-QGYKNHYLSDEMLAGKKELYD--FTPESI 274 ++ + I + + + N D +L ++ + TP+ Sbjct: 274 DIFAIQSELAKAITDALRIALTDQETDNLEKRPTSNLAAYDLVLKHRELVKRDGNTPDRQ 333 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT 334 ++++ R + E + LA + +A + +++ + Sbjct: 334 TESISLLQR---AVTLDPDFAEAWAELAAVYAQSYFWYYERSSERLDQATQAIEHAKRLA 390 Query: 335 TVDGKILAIMG--LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + ++A G G AK S+ +E+ + + + + E+ Sbjct: 391 PDNLNVIAFSGDYYYYGFRDYAKASNS-YERVLEAAPNHVGALASVGFIRRREGQWAESI 449 Query: 393 ICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLY 430 + L+++PR V+ I++ Sbjct: 450 RWHRRVLEIDPRNV-TVLTGLQTTYRTMRHFDEAIEMA 486 >UniRef50_B1M705 Adenylate/guanylate cyclase with TPR repeats n=8 Tax=Methylobacterium RepID=B1M705_METRJ Length = 658 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 94/294 (31%), Gaps = 17/294 (5%) Query: 122 IFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFK 178 + PF + + L + ++ + G + + N + Sbjct: 257 VLPFANLSSDPEQEFFADGLTEDLTTDLSHLAGSFVIARNTAFTYKNKPVDVRQLGRDLG 316 Query: 179 PDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHK 236 Y + G + + N L +LI+ + I S+ + + + + +++ Sbjct: 317 VRYVLEGSVRRANDKILLNAQLIETEAGSAIWSDRFEGERSRVGEIQTEFVARLARSLDV 376 Query: 237 PERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDF-TPESIYRAMTIFDRLQ----NKSDI 290 + + N+ SD + G L TPE+ ++ F+ + Sbjct: 377 QLMRAESLRSLRERPNNPDASDLAMRGWAALNRIRTPENTRDGISYFEHALTIDKDLPSA 436 Query: 291 QTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL 350 Q +LA S S+ + +A +++ + I G + Sbjct: 437 QLGLARALSVLAGSGWS------SDRQADVSRADDIVTPFLLANPTNALAHYIKGGVYRT 490 Query: 351 SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 Q + +QA + + A Y LV N + +E K+++L P+ Sbjct: 491 RKQFDQATAELDQAIFYDPNFADAYDQAGLVRLLNGQSKEIFPFSMKAIRLSPQ 544 >UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobacterium angustum S14 RepID=Q1ZPR1_PHOAS Length = 481 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 56/108 (51%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 ++ + L +T + L + + + + +L L ++ G V +D +I+ VW +VS Sbjct: 5 NFKINDCLLITTENSLKKSGKTYILEPRITKLLSFLAQNQGIVFTRDELIDEVWDGAVVS 64 Query: 68 DESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT 115 D+ +T+ I+ LR I +K+ D I TI ++GY+ V + I+ + Sbjct: 65 DQVVTQSIFELRKILKKLDEDHWIITIPKRGYKLDADVQQIYIDPNTG 112 >UniRef50_Q0ASW3 TPR repeat-containing protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASW3_MARMM Length = 644 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/315 (12%), Positives = 107/315 (33%), Gaps = 16/315 (5%) Query: 102 SGQVFKTKINE--DNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYP 157 S + + +D S+A+ PF D + + I N ++DGL+ Sbjct: 145 SAPIEASSGEAIIQAPADASVAVLPFADLSPAGDQAYFGDGMAEEILNVLTRVDGLHVAS 204 Query: 158 MAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL-- 214 + F D + V G + ++ + +LID++ + S+ Sbjct: 205 RTSAFQFRGDTTGIPDIARALNVRHVVEGSVRKSGDQLRITAQLIDSEGDRHLWSDTFDR 264 Query: 215 --PVDELHNTSQFIIDNILQTVHKP--ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFT 270 + + I + I+Q + + + + + D L + + + Sbjct: 265 PLTAENVFAIQDDIANEIVQALSQALDLDGLESVAIESDTGDLDAYDLFLQAQAIFFARS 324 Query: 271 PESIYRAMTIFDRLQNKSDIQTLKTECYCLL-AECHMSLALHGKSELELA-AQKALELLD 328 +++ +++ +R + + LL A ++ + +++ A + D Sbjct: 325 SDNVLEGISLLER---AVTVDPRFARAWALLAAFNSVTPSWIDTRDMDRDFIALAQDAAD 381 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 +++ +I + S + + A + A+++Y+R + + + Sbjct: 382 RATELNPALALPYSIRSNLLAASADWEAAMAQANAAVEREPETANVWYFRGGISLNVGQF 441 Query: 389 EEARICIDKSLQLEP 403 + A L ++P Sbjct: 442 DAAAADYQTCLDIDP 456 >UniRef50_Q01NG0 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NG0_SOLUE Length = 885 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 49/304 (16%), Positives = 101/304 (33%), Gaps = 18/304 (5%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDH 167 SIA+ P + + + +I GL + + Sbjct: 422 EPAAGGVRSIAVLPLENLSGGREQDYFADGITDALISDLAQIHGLRVISRTSVMSYKGVS 481 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELH------N 221 + G + + + + L++A + S + Sbjct: 482 RRLPAIARTLGVQTIAEGSVLRAGNHVRIAVRLVEASKDSPVWSGSYEGELRDVLTVQNQ 541 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKE-LYDFTPESIYRAMTI 280 + I I + P+R+ RL++ + Y DE L G+ + L +FT ES RA+ Sbjct: 542 VAAAIAGEIRVALAAPDRA-RLSRHQRVDLVAY--DEFLKGRHDYLAEFTRESADRAIAH 598 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 F + + Y LA+C+ ++ + E KA + G+ Sbjct: 599 FHQ---ALKLDPSYAPAYAGLADCYYMVSSMYYAPAE-VMPKAKTAALKALQLDDTLGEA 654 Query: 341 LAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 A + L+ L + F +A A ++ + +L + +EA ++++ Sbjct: 655 HATLALVQSLFEFNRAAAERGFRRAIELKPGDAQVHLWYSLHLAGLGRFDEAAAEVEEAQ 714 Query: 400 QLEP 403 +L+P Sbjct: 715 KLDP 718 >UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseudomonas fluorescens RepID=Q3KEV5_PSEPF Length = 928 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 56/379 (14%), Positives = 118/379 (31%), Gaps = 39/379 (10%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 M L + F ++ +G++ + + ++ + +L++LL AG VV K +I V Sbjct: 1 MSLSPNQAIGFGPYRIHPGQRLVLEGDQPLRLGRRAMDILLILLAHAGEVVSKQQLIAGV 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINE-DNTSDY 118 W + +V D +L + +LR R I T+ ++GY F V I + T++ Sbjct: 61 WPDSVVEDINLRVHMAALRKALGDGQAGQRYIVTVAQRGYSFVAPVVLQSIEQRPTTANL 120 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQIISNKK---IDGLYTYPMAATNFCNDHISQNSFLS 175 P + ++ L+ + ++ + G + Sbjct: 121 GRHNLPLRRTRMIGRQSVV-DSLMTQLPRQRCITLVGPGGIGKTTVALRVAEQLIGRYRD 179 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVH 235 + ++ + L+D + +L + Sbjct: 180 --GIRLLDLAPLKHPGSICSHLAALLDLSLHDGEPMA-------CLINSLRERQMLLVID 230 Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDF-TPESIYRAMTIFDRLQNKSDIQT-- 292 E LS+ +L G +++ T RA + + D Sbjct: 231 NCE--------HLIDAVALLSESILRGAPQVHILATSRESLRAEGEYVQRLESLDCPPPI 282 Query: 293 ------LKTECYCLLAECHMSLALHGKSELELA-------AQKALELLDYVSDITTVDGK 339 E L ++A H E A + L+ + ++ Sbjct: 283 AVLDRDQAMEFSALQLFVERAMAAHEHFEPGNADLPLIIDICRRLDGIPLALELAAAQVA 342 Query: 340 ILAIMGLITGLSGQAKVSH 358 L + GL++ L G+ + Sbjct: 343 GLGLEGLLSQLQGRLPAGN 361 >UniRef50_B1ZFX8 Transcriptional regulator domain protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZFX8_METPB Length = 404 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 93/303 (30%), Gaps = 10/303 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFC 164 + S+A+ PF D L L + + + GL+ + F Sbjct: 2 APPSLPLPDRPSVAVLPFADPEGDFDTQALADGLSEHVTDALACTPGLFVSARNSAFTFK 61 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQ 224 + + R + +TG +++ + L A + L DE Sbjct: 62 GRAVPPDEAAGRLGVAHVLTGTLSRTGTRLQVRARLHRAAAETPVWMQDLDADEG-ALHA 120 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDF-TPESIYRAMTIFDR 283 + TV + L + + + P + + I Sbjct: 121 LRSRIVAATVAAVAPGLALDAAPERAGPPLDAGVYAPFLSAYANHAMPSAESVRLRI-AS 179 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKAL--ELLDYVSDITTVDGKIL 341 ++ + Y LLA+C+ +L + G S + AA A L + D +L Sbjct: 180 IEAVRRLVPEHPLPYALLAQCYTNLVVQGWSP-DAAADCAEGARLARLALERDAGDPAVL 238 Query: 342 AIMGLITG-LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + G L+ + L +++ + + A+ Y V + + + A + + Sbjct: 239 MMAGHTLAFLAQDYDAALDLLDRSLALNPNSAAAYERSGWVRCYVGEADGAAAHFRAAKR 298 Query: 401 LEP 403 P Sbjct: 299 QSP 301 >UniRef50_B5JQ34 Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ34_9BACT Length = 868 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/305 (13%), Positives = 96/305 (31%), Gaps = 12/305 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAATN-FC 164 T+ + S+AI PF + + I + + + Sbjct: 256 TQTPDTPPPKRSLAILPFENRSELEKDRFFADGIHDDLITRVSHIPEVKIISRTSVMSYR 315 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH----LPVDELH 220 + + G + ++ + I+L+DA F + + + + + Sbjct: 316 DSDKDLKKIARELGVTNIIEGGVQRSGNQIRINIQLVDAATGFHLWAKNYTREISAQNIF 375 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDE-MLAGKKELYDFTPESIYRAMT 279 + + + + + + L D + S E GK + T S + + Sbjct: 376 ALQAEVTEAVARELSPQLSAKTLNPSDTIPTENLASLEAYFRGKSSIALLTNASFEQGID 435 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 F R ++ + + LA +++ + KA +D + + Sbjct: 436 HFKR---AIELDPNFAQAHAELANTYLNRIHFQGLPVGEQVAKAQPHIDQALQLNKQLSE 492 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN-EKIEEARICIDKS 398 +G ++ + + F++A + + A Y AL + E A + K+ Sbjct: 493 AHVALGFLSFCQIKTAKAIQAFQRAIELNPNNAFAYQQLALAQMYQVGDPEPALVLARKA 552 Query: 399 LQLEP 403 +L+P Sbjct: 553 AELDP 557 >UniRef50_A5CFS8 Transcriptional regulator n=1 Tax=uncultured marine microorganism RepID=A5CFS8_9ZZZZ Length = 191 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%) Query: 2 DLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 DL+ + + E G+L QG + ++ + VL+VL G VV ++ ++++VW Sbjct: 7 DLQGG--FELGPWTVIPERGLLRQGTVKEHLEPMVMDVLMVLASHQGSVVTREQLVDAVW 64 Query: 62 KNIIVSDESLTRCIYSLR-CIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT 115 V+DE++ I +LR + + IET+ R+GYR + E Sbjct: 65 DGRFVADEAIVAKIATLRHKLGDHAKNPTYIETVPRRGYRLMMTAVVPEAPEPEQ 119 >UniRef50_A3I071 Adenylate cyclase protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I071_9SPHI Length = 597 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 52/355 (14%), Positives = 120/355 (33%), Gaps = 19/355 (5%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDH 167 + + SIA+ PF N+ + + + I + +I+ L ++ + DH Sbjct: 1 MEKQTEKSISIAVLPFKNISNSEENNFFCDGITEEIINAFSRIEQLKVTSRTSSFYFKDH 60 Query: 168 I-SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDA--KNLFLIASNHLPVDELHNTSQ 224 S + + + G + + + +LID F + + L Sbjct: 61 SYSLQEISEKLGVNVILEGSVRVSGNSLRIRAQLIDVIEDTTFWTETWDRKKENLFEIQD 120 Query: 225 FIIDNILQTVHKPERSV----RLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 I I + + E + +L Y +L G+ Y + PE + A+ Sbjct: 121 EISLIIADKLREHEGHLTISDQLVNFPTQNITAYEH--LLKGRYHFYKWNPEDVNIAINE 178 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG-K 339 F++ + + A+ + +A+ G + E + KA+E + + Sbjct: 179 FEK---ALALDPNLIDALLGSADSYSFMAVAGFAPREESWMKAVEAMQLAKVLDPNHAGL 235 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 L + + ++A + A + + + + +A+ I + Sbjct: 236 NLMLSHHAFFTEANFSSAMKFIQKAVVARPTYAEAHQFLSFFNTLKGDFNKAKEHILYAK 295 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKL---YYKETESESHRVIIDNILKLKQ 451 ++P + + +Y N L IK+ +E E +I+ + +K+ Sbjct: 296 SVDPLNPETRFFQA-NYLYRTNELDEAIKILNALLEENEKNLPALIVSTYIHIKE 349 >UniRef50_A4ABU3 Adenylate/guanylate cyclase protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABU3_9GAMM Length = 728 Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 103/310 (33%), Gaps = 12/310 (3%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA 160 QV + SIA+ PF D L + + +I L + Sbjct: 123 AQVESAGPALADLPPNSIAVLPFADISQQRDQEFLGDGISDTVMHVLSQIADLSVTARTS 182 Query: 161 T-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVD 217 + F + S S + + G + + + LIDA+ + S +D Sbjct: 183 SFAFKGQNRSVTEIASMLAVAHVLEGSVQRAGDKVRIIARLIDARVGTEVWSGYYDRTLD 242 Query: 218 ELHNTSQFIIDNILQTVHKPE-RSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIY 275 + I + + K ++ D Y+ + ++ + GK+++ + + Sbjct: 243 SIFAIQDEIAREVATALTKEVLKTGETQLVDNAYRPDLEAYEKFILGKQQMEQQSRPAAE 302 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT 335 A +F Q DI Y +LA A G + A EL+ D+ Sbjct: 303 NAKRLF---QEAIDIDPNYAMAYVMLANAQYQSA--GMQGRQAMILSASELVAEALDLDP 357 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + + L+ L + + ++A A Y A + + + A I Sbjct: 358 QLAEAHGMSALLLSLQKRNAEARAAVDRAIELRPSYARAYATLASLLYAEADFDGALAQI 417 Query: 396 DKSLQLEPRR 405 K+++L+P+ Sbjct: 418 RKAIELDPQE 427 >UniRef50_C3KQQ8 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQQ8_RHISN Length = 743 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 92/324 (28%), Gaps = 10/324 (3%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT-NFCNDHI 168 SIA+ PF D + I ++ L + + + Sbjct: 232 PFAPQRPSIAVLPFLNLSGDPDQDYFTDGITDNLITDLARLSDLDVVSRNSVFAYKGKPV 291 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFI 226 + V G + + + +LIDA + + +N ++ + Sbjct: 292 VLADIERDLGVRFVVEGSVQRTGDQIRVNAQLIDAASGDHLWANRFGRGGADVFAVQDEL 351 Query: 227 IDNILQTV---HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 I + + P + R+A+ Y D L +E + A+ +FD+ Sbjct: 352 SRQIAEALGLKLTPSEAERIARPPTANLEAY--DYYLRAAQETRTGRRSRMLEALALFDK 409 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + A + LA ++A + + A+ Sbjct: 410 AETLDPGFAEAFAADAHATAYVWRSAYDDVLQSALARKRAYDKASRALALDPELSSPYAV 469 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + ++ + + + + +A A + A V + EA + +L+ +P Sbjct: 470 LAVMQVVERRHEQAITSARKAVSLGPADADAHMAFAYVQLVSGNHAEAAAAVATALKHDP 529 Query: 404 RRRKAVVIKECVDMYVPNPLKNNI 427 + Y+ I Sbjct: 530 NLSAIGRYTAGLVFYLQRDYAKAI 553 >UniRef50_C6W151 TPR repeat-containing protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W151_DYAFD Length = 470 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 47/304 (15%), Positives = 97/304 (31%), Gaps = 10/304 (3%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NF 163 + + SIA+ PFT N + + + + I N ++ GL ++ F Sbjct: 3 EENQPHGRAAQISIAVLPFTNLSNDPEEEYFSDGVTEEIINVLSRVPGLQVAGRTSSFVF 62 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLF-LIASNHLPVDELHNT 222 N + + ++ D+ + G + + + L+ ++++ + Sbjct: 63 KNQNTDLQAISTQLHADHILEGSLATSGEQLVITARLVRPDGSEIWSERYDRDLEDIFDV 122 Query: 223 SQFIIDNILQTVHKPERSVRLAKQ-DQGYKNHYLSDEMLAGKKELYDF-TPESIYRAMTI 280 + I IL V A + N L + F + E ++A+ Sbjct: 123 QEEIAQAILGAVKIELLGEEPAAAFKRYTSNKEAYQHYLRARFYHNKFGSSEEYHKAIGY 182 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 F Q Y +A C++++ + A + + Sbjct: 183 F---QAALASDPSYAIAYSGIASCYLNMWFYRHIPAAKALPLMEAATRQALALDASIAES 239 Query: 341 LAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + + L K + F A + + A L+ AL ++ EA+ SL Sbjct: 240 YLALARMQMLYEWDFKSAAASFRTALELNWNTADLHGQYALFLALTDRPGEAQQEAALSL 299 Query: 400 QLEP 403 LEP Sbjct: 300 TLEP 303 >UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes RepID=A4CH85_9FLAO Length = 706 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 89/274 (32%), Gaps = 11/274 (4%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFC 164 ++ + SIA+ PF + L++ N KI+ L + + Sbjct: 173 SRPPTSIEVEKSIAVLPFKNESSDTTNTYFVNGLMESTLNNLQKIEDLRVVSRPSVEKYR 232 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNT 222 + + + +YF+ G + L I+LI+A I + + ++ Sbjct: 233 HSDKTIQEMAGELEVNYFIAGSGQREGDRVLLNIQLIEAATDRQIWAEQYSRELGDIFAL 292 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIF 281 + I + + ++ + + D L + + E + RA+ +F Sbjct: 293 QHEVAQKIAAAIEAIVTPAEREQIEKVPTENLAAYDYYLQALEPYHAGNGEGLLRAIGLF 352 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 ++ + Y +A + L + + + L D + + L Sbjct: 353 EQ---AIGEDPQFAQAYANMAIAYFLLDMD--LAEKKYTDRINNLADKALLYDSKLAESL 407 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 L Q +++ E+A ++ + +Y Sbjct: 408 VAKALYYMQVKQYRLALPHLEKALEYNPNSVLVY 441 >UniRef50_A5CFV3 Putative adenylate/guanylate cyclase protein n=1 Tax=uncultured marine microorganism RepID=A5CFV3_9ZZZZ Length = 743 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 54/324 (16%), Positives = 112/324 (34%), Gaps = 29/324 (8%) Query: 98 GYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYT 155 G RFS +V + + SIA+ PF + D + + + I+ L Sbjct: 115 GMRFSDRVSTV-----DANRLSIAVLPFESRSADPDNVFFADGIHDDLLTMLGNINSLRV 169 Query: 156 YPMAATN-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH- 213 + + + + + G + + + ++LID + + Sbjct: 170 ISRTSVMEYRDTKKNMRKIGEELGVTTILEGAVQKAGDNVRINVQLIDTNADQHLWAQSY 229 Query: 214 ---LPVDELHNTSQFIIDNI---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELY 267 L + + I I LQ PE S RL Y + L G+ +Y Sbjct: 230 DRQLTTNNIFAIQSEISAAIASALQATLTPEESARLDSVPTENLEAY--NLCLVGRNNIY 287 Query: 268 DFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS-LALHGKSELELAAQKALEL 326 +++ +A F+R ++ + Y L++ M L+ H + A + Sbjct: 288 SRRLDNLQQARQQFER---AIELDPNYAKAYSGLSDSVMLILSNHKAISTDEAFPISELA 344 Query: 327 LDYVSDITTVDGKILAIMGL-------ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRA 379 LD + + D I A +GL +H FE+A + + ++A Sbjct: 345 LDKAVALDSSDADIYASVGLYKMELWKSQVDKSARDAAHEAFERALKINPNHVQALMWQA 404 Query: 380 LVHFHNEKIEEARICIDKSLQLEP 403 + + ++ +++++L+P Sbjct: 405 -SLYDESETSKSIELYERAIELDP 427 >UniRef50_A1ZHF0 Adenylate cyclase; Cya3, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZHF0_9SPHI Length = 594 Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats. Identities = 49/295 (16%), Positives = 99/295 (33%), Gaps = 15/295 (5%) Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLS 175 SI + PF + + + + + I + +I GL ++ F N H+ + Sbjct: 6 SIVVLPFANLSTSNENEFFSDGITEEIINALTRIPGLRVTSRTSSFYFKNKHLPVTNIGQ 65 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQF----IIDN 229 + + G + + +LIDA + S VD + + + D Sbjct: 66 QLNVALLLEGSVRLAGDQMRITAQLIDAAEDVHLWSETWDRKVDHIFDIQDEVSLLVADK 125 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + + + +L Y L G+ + PE +++T F++ Sbjct: 126 AREFLGHFDIQAQLINPQTQSYQAYE--WYLKGRFYFRKWNPEDAQKSVTCFEQ---ALK 180 Query: 290 IQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI-LAIMGLIT 348 + E LA+ LA G E A Q+A ++ I + L+ Sbjct: 181 LDPHHAESLLGLADALGFLATTGAMEHATAWQRAEVCINQALVINHQLPEAHYQRSNLLF 240 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 G ++ QA + + A + ++ EA+ +D+ L +P Sbjct: 241 FTQGNYSMAVQAAVQAHKLNPNYAEANQHLTFLYLIAGNNIEAKAHLDQLLMFDP 295 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 S+HF + T+ +T V + K +++ L+E+ +V +D + E +W V Sbjct: 1 MSFHFNDVEIDTKQYRITCAGLTVSVEPKVFDIIVYLIENRNRLVSRDELFEKIWDARAV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 SD +L+ I S R G + I+T+ +GY+F +V + + ++ + S A Sbjct: 61 SDTTLSNHIKSARKALGDDGEQQHTIKTVRGRGYQFIAEVSVSALTDEPIAASSSAP 117 >UniRef50_B5WFU1 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. H160 RepID=B5WFU1_9BURK Length = 558 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 128/408 (31%), Gaps = 46/408 (11%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F L + V + + L +LIVL++ AG VV + M++ W+NI+V + Sbjct: 80 SFGPFTLFPAQRRLERSGSFVQLGSRALDILIVLIQHAGQVVDRRMLMSRAWRNIVVDES 139 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTS---DYSIAIFPF 125 +L I LR G R ++ + GY F GQ+ + +I ++ S + S + Sbjct: 140 NLRVNIAGLRKALGDGEGRVRYVKNVPGIGYCFVGQLTRERIVAESGSQIAEPSPCVHSA 199 Query: 126 TTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 P E+++ +++ + + I+ LS P Sbjct: 200 DFGPGAACPQG-RDEVLRTLASDLRRHRLISIVGPGGIGKTTVAIALAKRLSGVFPSEIH 258 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIAS--------------NHLPVDELHNTSQFIIDN 229 +++ + + + L L + + +D + Sbjct: 259 VADLSEVADGDAVALTLARLLGLGDLHHVPVTYIANYLSTRRALIILDNCDYVIDEVTAL 318 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGK-----KELYDFTPESIYRAMTIF-DR 283 +Q + + + + + Y L+ +E+ Y A+ +F R Sbjct: 319 TMQILAVSSGTHFVLTSREALRVRYEHVCRLSALEVPPGREVNSIEHAHGYSAVQVFIQR 378 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 ++ Y ++E + LE + ++ + Sbjct: 379 ALEAGASFPQTSKSYAAISE----------------MCRELEGVALAIELAAARVATFGL 422 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 G +T L S + ++ + SL + E + Sbjct: 423 AGTMTLL---GTRSRLQWQGCRNAPARHRSLAASIGWSYALLSDEERS 467 >UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M6Q3_RHIL3 Length = 955 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 59/375 (15%), Positives = 115/375 (30%), Gaps = 29/375 (7%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + F E +L + E V + + L +LI L E G +V KD +I W N I Sbjct: 14 NLATSFGEFRLYPGRHLLVKDQEPVAVGSRALEILIALTERPGELVTKDELISRAWPNTI 73 Query: 66 VSDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQV--FKTKINEDNTSDYSIAI 122 V + +L I LR R I + +GYRF + + KI+ + + Sbjct: 74 VEESNLRAQIAVLRKALGEDQSAARYIAAVPSRGYRFIAPLSRSEVKIHPVEEAAPNNLP 133 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 T + + + + + +Q + G S + + Sbjct: 134 KQLTRPIGREEAIGILEGRIQRFRLVTVVGPGGIGKTTVGVRVAEE--LSSSYQHGVCFV 191 Query: 183 VTGRINQNNAVNTLYIELID----AKNLFLIASNHLPVDEL------HNTSQFIIDNILQ 232 ++ +++ ++ L+ + + S HL + + + Sbjct: 192 DLAPLSHPSSLPSVLASLLRLPEITGDPISLVSAHLRDKHMLLVFDNCELVLDAAARLAE 251 Query: 233 TVHKPERSVR---------LAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 T+ + + + + Y+ L L D + A+ +F Sbjct: 252 TLLREAPGISVLATSREALRVEGESVYRLPPLDMPPLGAGLTAAD---ALAFPAIRLFVD 308 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILA 342 S + + + H+ L G + ELAA + D L Sbjct: 309 RATSSGSEYAFDDDEAPIV-THICRQLDGIALAIELAAGRVEAFGTRGIAELLNDRLRLL 367 Query: 343 IMGLITGLSGQAKVS 357 G T L ++ Sbjct: 368 TGGRRTALPRHQTLA 382 >UniRef50_Q1ISU5 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISU5_ACIBL Length = 798 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 46/295 (15%), Positives = 88/295 (29%), Gaps = 17/295 (5%) Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLS 175 +IA+ PF + N + L+ L + + L +A + + + Sbjct: 344 AIAVLPFVNAGNDPNTEYLSDGLTDSLIDRLSNLPNLTVMSRSAVFRYKGQQVDPQTVGR 403 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHN------TSQFIIDN 229 +TGR+ Q+ + +EL+ AK+ I + I D Sbjct: 404 DLHVGALLTGRVIQHGDKVQINVELVSAKDDSHIWGRRYEESLSQAQSVEVRIASDISDR 463 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 L E +L KQ Y L G T +S+ + F++ Sbjct: 464 -LGLRLSGEAQQKLRKQYTNNPEAYQ--LYLKGVYWSNKATRDSLNKGKEYFEQ---AVK 517 Query: 290 IQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 Y LA + +A KA E + + + MG + Sbjct: 518 NDPNYALPYTGLA-VYYRIADDWFMAPHDCMPKAKEAAEKALQLDPSSPQAHTEMGEVYF 576 Query: 350 LSGQAKV-SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + F ++ + D A + + + +E + +L+P Sbjct: 577 FYEFRWADAEKEFRRSIELNPDYALAHSDLGWLLTSTGRAQEGISESKRGQELDP 631 >UniRef50_B2T985 Transcriptional regulator, winged helix family n=2 Tax=Burkholderia RepID=B2T985_BURPP Length = 504 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 2/137 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + L + V + + L +LI L++ AG VV + ++ W+NI+V + Sbjct: 26 SFGPFTLFPTERRLERSGSVVQLGSRALDILIALIQHAGQVVDRRKLMSRAWRNIVVDES 85 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +L I LR R ++ + GY F GQ+ + +I +++S +S FP S Sbjct: 86 NLRVNIAGLRKALGDGEDGVRYVKNVPGIGYCFVGQLTRERIATESSSHFSE-PFPRVHS 144 Query: 129 LNTLDPLILNQELVQII 145 Q +++ Sbjct: 145 GGFAPGAARPQGRDEVL 161 >UniRef50_Q0ASW0 Integral membrane protein-like protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASW0_MARMM Length = 605 Score = 111 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 50/314 (15%), Positives = 103/314 (32%), Gaps = 24/314 (7%) Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCN 165 I +D SD SIA+ PF D + + + I N +I+GL + + + Sbjct: 126 AIADDIPSDNSIAVLPFLDLSPAGDQQYFSDGISEEILNVLVRIEGLDVTSRTSAFQYRS 185 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS----NHLPVDELHN 221 D + R + + + G + ++ + +LIDA+ + S L + L Sbjct: 186 DTMGVPEIAERLRVRHVLEGSVRRSGNTIRITAQLIDARTDVHLWSQTYDQSLTAENLFA 245 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYK--NHYLSDEMLAGKKELYDFTPESIYRAMT 279 I + I++ + ++ + N D L + + T + A Sbjct: 246 IQDEIANAIVRAL-SEVLDIQAPEIAVAPLTDNVDAYDLYLQARDLFHRRT--DLDVAAD 302 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE--LLDYVSDITTVD 337 + + +S T + L A HG S Q AL + + Sbjct: 303 LLAQAVGQS---PDFTAAWALRAAISNVRESHGYSPEAGVDQAALTESYARQTLALDPDN 359 Query: 338 GKILAIMG-----LITGLSGQAKVSHIL--FEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 +A+ + + +L +A + A++ + + ++ Sbjct: 360 ALAIAVRASHQSQRMIFQREPGDIGSVLTDLNRAAALNPHDATIQNWLGMGRLFIGDLDG 419 Query: 391 ARICIDKSLQLEPR 404 A +Q+E R Sbjct: 420 ALSSFQTCVQIEAR 433 >UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobacter sp. CCS2 RepID=A4EHZ3_9RHOB Length = 675 Score = 111 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 59/355 (16%), Positives = 133/355 (37%), Gaps = 22/355 (6%) Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYR--KGYRFSGQVFKTKINEDNTSD---Y 118 ++VS E+ +C L FE +G + + T + +R ++ D ++ Sbjct: 224 VVVSVEARDQCHAELDFDFEDLG-QQILRTTNEDIRAFRVHANTSGARLMPDIAAEDLLP 282 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLS 175 +IA+ P + + D ++ + + + + + + + T F S + Sbjct: 283 TIAVLPLRARIASADTNVIGEIMADDLIATLSRSADVNVISRLSTTAFRAQEASLDKIGD 342 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVH 235 D+ ++G I ++ + ++L + ++ + + V+ + I+ + + V Sbjct: 343 MLGADFVLSGTILTHDTHVGMMLQLSEVSTNKVLWAERVAVEVTDILNG--IEAVEEIVA 400 Query: 236 KPERSVRLAKQDQGYKNHYLSD-----EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 K +++ L + D+ ++ +S ++ +Y F P A + L + Sbjct: 401 KVRKAIALNEIDRV-RSRPISTLRNYSLLIGAVGLMYRFAPVDFNLAGEMLRTLIERVPN 459 Query: 291 QTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 +A ++ G S + AAQ+AL DI + L G + Sbjct: 460 HP---AALAWMARWYVLRVQQGWSGNPQEAAQQALGFSRKALDIDPENALALISEGNVLT 516 Query: 350 -LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 L Q + ++ A + + AS R + K EEA+ + +L L P Sbjct: 517 HLLHQLDEAEERYDTALDINPNDASGRVLRGALFAFQGKGEEAKRDCEHALHLAP 571 Score = 92.9 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 D +L + QV + + VL +L+++ G V KD +I +VW+++ V+D+SLT+CI +R Sbjct: 19 DCLLDEAGNQVSLRPQSAQVLSLLVDNIGQTVTKDDLISTVWQDVSVTDDSLTQCIADVR 78 Query: 80 CIFEKIGYDRCIETIYRKGYRFS 102 R ++T + GY+ S Sbjct: 79 RALGDTDR-RILKTRPKVGYQLS 100 >UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89GS8_BRAJA Length = 947 Score = 111 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 95/268 (35%), Gaps = 24/268 (8%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F L + +L + +++ + L +LI L E AG VV K +I+ VW + V + S Sbjct: 13 FGPFRLLAKSRLLEKDGAPLHLGGRALDILIFLAERAGEVVDKRELIKRVWSGVTVDEGS 72 Query: 71 LTRCIYSLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI--FPFTT 127 L I +LR G R + + +GY F+ + +E TS + P Sbjct: 73 LRFHITTLRKALGDAGEGARYVVNVPGRGYCFTAPLLHPAPSESRTSPPVSSPHALPSPL 132 Query: 128 --------SLNTLDPLILNQELVQIISNKKID----GLYTYPMAATNFCN--DHISQNSF 173 ++ + + V I+ I L T F + + Sbjct: 133 ARMIGRGEAVEKISAELALHRFVTIVGPGGIGKTSVALAVAHGELTAFDGQVSFVDFGAL 192 Query: 174 LS-RFKPDYF--VTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHNTSQFIID 228 R P G ++ + + ++ L+ H+ +DEL ++ ++ Sbjct: 193 TDARLVPGTIAATLGLTVNSDDPMPGLLAFLRSRRTLLVFDSCEHI-LDELAPVAERLVQ 251 Query: 229 NILQT-VHKPERSVRLAKQDQGYKNHYL 255 + + R ++ ++ ++ L Sbjct: 252 EAPELHILATSRESFRSEGERVHRLFPL 279 >UniRef50_A5P8P2 Transcription activator ToxR n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8P2_9SPHN Length = 342 Score = 111 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 1/97 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + L +G E V + + L++L G ++ K ++ VW+ I V+DE Sbjct: 9 RFGDFTLDLHGRRLLRGGEAVELGSRYFDALVLLATHPGELISKTRFMDDVWRGIPVTDE 68 Query: 70 SLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQV 105 +LT+ I +LR R IET+ + GYRF ++ Sbjct: 69 ALTQAIRTLRRALGDEASAPRYIETVPKHGYRFIAEL 105 >UniRef50_A1S359 Putative transcriptional regulator, CadC n=1 Tax=Shewanella amazonensis SB2B RepID=A1S359_SHEAM Length = 729 Score = 111 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N Y + + E ++ + + + + VL+ LLE AG V +D +I VW+ Sbjct: 3 NNKKYRLGPYMVIPERCVIAKNGSDTKLELRVMQVLVCLLERAGRPVSRDELIREVWRGG 62 Query: 65 IVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 VSD ++ R I LR + I+T+ + GY +V + SD + Sbjct: 63 QVSDNAINRIIAQLRSALGDDARSQQVIQTVPKVGYLLIAEVEPLEGQVITPSDLT 118 >UniRef50_C3KKQ7 Putative adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKQ7_RHISN Length = 578 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 49/327 (14%), Positives = 102/327 (31%), Gaps = 33/327 (10%) Query: 94 IYRKG-----YRFSGQVFKTKINEDNTSDY-SIAIFPFTTSLNT-LDPLILNQELVQIIS 146 IYR G +RF + T+ + S+ + PF T T D L + + ++ Sbjct: 160 IYRVGAAMDRHRFL--IAPTRPAPPLSIRPNSVVVTPFATPSATDQDQTFLAEGMTDDLT 217 Query: 147 N--KKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAK 204 ++ L+ +A++ Y V G + + A + I LI+ Sbjct: 218 LELSRLKSLFVTSRSASSV-LRTADPVEIGKVLGVRYVVAGSVRKAGAQVRVNISLIETA 276 Query: 205 NLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEML 260 L+ S+ + + + + + ++ + + L Sbjct: 277 EGHLLWSDRIQR-PFAEILDIMDEITARVAATVSGRIEQSELAAARLKRPENMSAYEHYL 335 Query: 261 AGK--KELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL--LAECHMSLALHGKSEL 316 G L ++ AM F++ + + + + EL Sbjct: 336 RGLDHHRLAGVADVHLHEAMGWFEK---AMQADPGFGRPFAMHVCSWSSLPSFDLEAGEL 392 Query: 317 ELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYY 376 + A + ++ D + IMG I G S E+A + + A Sbjct: 393 QTA---------HALELDPTDPEAHRIMGAIKMKRGDFVASRFHHERAIELAPNDAYTIG 443 Query: 377 YRALVHFHNEKIEEARICIDKSLQLEP 403 A + + A +D++ L+P Sbjct: 444 RCAAFYLFAGEPLRALELLDRAETLDP 470 >UniRef50_A4APJ2 Probable serine/threonine kinase n=2 Tax=unclassified Flavobacteriales (miscellaneous) RepID=A4APJ2_9FLAO Length = 686 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 45/298 (15%), Positives = 98/298 (32%), Gaps = 17/298 (5%) Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCN 165 ++ ++ SIA+ PF N L L++ N KI+ L + F Sbjct: 154 EVPQEKKIVKSIAVLPFKNESNDSTNLYFVNGLMESALNNLQKIEELRVISRTSVEKFRQ 213 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDA--KNLFLIASNHLPVDELHNTS 223 ++S +Y V G + L I+LI+A + + + ++ Sbjct: 214 TNLSAPEIAKELNVNYLVEGSGQRVGNQVLLNIQLIEASTDTPIWVEQYNQEIVDIFALQ 273 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFD 282 + I ++ L + ++ ++ + D L + + T E + A+ +F+ Sbjct: 274 NDVAKKIAVSIEAVVTPAELERIEKKPTDNLEAYDYYLKALEPYHSRTKEGLEEAVLLFE 333 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 + T Y +A + L + K + D + L Sbjct: 334 K---AIKEDTQFARAYANIAISYYFLDIDKKHKQYTELIN--NYADKALLYDSKSDLSLI 388 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 L + + +++ E+A ++ + + V + A DK L+ Sbjct: 389 AKALYYAQTDEYRLALPHLEKALEYNPNSTPV------VQMLADLYARAIPNTDKYLE 440 >UniRef50_Q1IJ33 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ33_ACIBL Length = 769 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 93/303 (30%), Gaps = 13/303 (4%) Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCND 166 + ++S S+A+ P D ++ + + I+ KI + ++ Sbjct: 341 QTAATSSSKPSVAVLPLKNLSGDGDNNYFSEGMTEEITTKLSKIQAINVASHSSVVAAKT 400 Query: 167 HI-SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTS 223 S Y + G + + + ++LIDA N F + ++ + ++ + Sbjct: 401 ADKSATDIGKALNVRYVLEGSVRKAGNEVRINVQLIDAANGFQVWADDFTGEMKDVFSLQ 460 Query: 224 QFIIDNILQ-TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDF-TPESIYRAMTIF 281 + I Q K A Q + N D L G F + +++ A F Sbjct: 461 EQTAMKIAQSLNLKLSPQEEQAIQHRATDNPQAYDAYLRGSALTNTFDSKDALEGARKNF 520 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 + L+ L + +S+ + + A + + Sbjct: 521 EE---ALKYDANYPPAVAGLSWVEAQLYRNVESDPKH-LELAEKYGQKALQLAPDAADTH 576 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN--EKIEEARICIDKSL 399 +G I + + F +A + D + + A K+L Sbjct: 577 LAIGSIAAIKYDYNTAAREFRRATELAPDSGYASDLLSWALSYQIPPDPIGAEAAARKAL 636 Query: 400 QLE 402 +L+ Sbjct: 637 RLQ 639 >UniRef50_Q2Y9M2 Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y9M2_NITMU Length = 1020 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 1/98 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + IL + ++ V + K +L L E AG +V KD ++++VW+ V + Sbjct: 7 EFHPFRLDKINAILWRNDQVVPLRPKNFAMLCYLAERAGTLVTKDELLDAVWQRRFVGEA 66 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVF 106 L CI +R + + T+ ++GYRF QV Sbjct: 67 VLKVCINEVRRALGDSVSAPTYLLTVPKRGYRFIAQVT 104 >UniRef50_Q12S47 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S47_SHEDO Length = 762 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 4/129 (3%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y +TQ N+ I K L VL L E+ G VV D ++E+VW+ +VS Sbjct: 4 QYSIGGFFIDLSRNQITQNNQSQIIAPKALAVLTYLAENQGKVVSHDALLENVWQGTVVS 63 Query: 68 DESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFK---TKINEDNTSDYSIAIF 123 +L R I LR G + I+T ++GY V + N + +I Sbjct: 64 PNTLQRSIAQLRKALGDDGKVQVYIKTHAKQGYSLECDVRWHDNIESPPLNAAQENIVDT 123 Query: 124 PFTTSLNTL 132 P + N L Sbjct: 124 PTMSETNAL 132 >UniRef50_B8KPN2 TPR repeat-containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPN2_9GAMM Length = 743 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 41/304 (13%), Positives = 90/304 (29%), Gaps = 13/304 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFCND 166 + SIA+ PF D + + + N K+ G+ ++ F Sbjct: 138 AQPPAGNVASIAVLPFADLSAAGDQEYFADGISEELLNVLAKVKGMQVAGRTSSFAFKGR 197 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQ 224 + + G + + +LI + F + S D + Sbjct: 198 NEDLREIGRVLNVANILEGSVRTEGDKVRVTAQLIQVSDGFHLWSETYDRDLTSIFAVQD 257 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDR 283 I IL + + + + L + + + RA + D+ Sbjct: 258 DIAQQILTAMKTELQIDVQDAITPATRTDINAYGLFLEARDLIASRDVAKMTRARALLDQ 317 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALH----GKSELELAAQKALELLDYVSDITTVDGK 339 I Y A+ H+ L+ G ++ KA+ ++ ++ Sbjct: 318 ---AITIDPAYAPAYAARAQVHLLLSDRPSSYGDIPHHVSRPKAVADVEKALELDPDLAH 374 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 A+ GL+ G+ + +A + + + AL + A ++ L Sbjct: 375 AHAVQGLLDNDEGRPDAARASLRRALELNPNSLDARNWLALALVDTGEFRAALEQLNALL 434 Query: 400 QLEP 403 ++P Sbjct: 435 AIDP 438 >UniRef50_C6AV68 Adenylate/guanylate cyclase with TPR repeats n=4 Tax=Rhizobium RepID=C6AV68_RHILS Length = 723 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/324 (11%), Positives = 91/324 (28%), Gaps = 10/324 (3%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHI 168 S+A+ PF + + + + L + + + Sbjct: 211 PFVPQRPSVAVLPFANLSSDAGQDYFTDGITDSLIADLTMLSDLDVIGHNSVFAYKGKPL 270 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFI 226 + V G + + + +L DA + + +N ++ + Sbjct: 271 VLADIGRDLGVRFIVEGSVQRIGDQIRVNAQLSDAASGDHLWANRFNRAAADVMAVQDEL 330 Query: 227 IDNILQTV---HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 I + + + R+ + Y D L ++ + A+ +FD+ Sbjct: 331 SRQIAEALGLKLTQSEAERITRPPTANLEAY--DYYLRAEQATRTGRRSRLLEALALFDK 388 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + A + LA ++A E + V A+ Sbjct: 389 AEALDPGFAEAFAADAHATAYVWRSAYDDVLQSALARKRAYEKASRALALDPVLSSPYAV 448 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + ++ + + + + +QA A + A V + EA ++ +L+ +P Sbjct: 449 LAVMQVVDRRYEQAVASAQQAVSLGPADAEAHMALAYVQLFSGNHAEAGAAVETALRHDP 508 Query: 404 RRRKAVVIKECVDMYVPNPLKNNI 427 + Y+ I Sbjct: 509 NLSAINRYTAGLVFYLQRDYTKAI 532 Score = 49.4 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 4/133 (3%) Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLL-AECHMSLALHGKSELELAAQKALELLD 328 +P ++ M + DR ++ + AE HM+LA A A ++ Sbjct: 444 SPYAVLAVMQVVDRRYEQAVASAQQAVSLGPADAEAHMALAYVQLFSGNHAEAGA--AVE 501 Query: 329 YVSDITTV-DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEK 387 GL+ L + FE+A+ S A+ + + Sbjct: 502 TALRHDPNLSAINRYTAGLVFYLQRDYTKAIDSFERARDGSPGNGDFVTPLAMAYARAGR 561 Query: 388 IEEARICIDKSLQ 400 +++AR + + ++ Sbjct: 562 LDDARATVAEGIR 574 >UniRef50_A4F1M4 TPR repeat protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F1M4_9RHOB Length = 508 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 55/312 (17%), Positives = 110/312 (35%), Gaps = 17/312 (5%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDP-------LILNQELVQIISNKKIDGLYT 155 Q ++ +A+ PF+ L P L +++ ++ KI L Sbjct: 104 AQPKHPPAQLSASTTPVVAVMPFSRHLAMHQPQLSSHVMEGLFDDVIDQLA--KIRWLSV 161 Query: 156 YPMAATNF-CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL 214 ++ N + + F +RF +Y ++ + N + L ++LI ++N+ + Sbjct: 162 ISRSSVIAGANAGMVPSEFGTRFDANYVISLDLFSNGDASKLGVDLIRSQNMEMTWQKTF 221 Query: 215 PVDEL---HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTP 271 + E + I+ + R + Q + +N S+ + GK L+ + Sbjct: 222 LLPESVAQADVRNIAIEIAGNVASQVSRVAQSCSQGRPSENSSFSELLWRGKWHLHRLSK 281 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 A IF + E + LA M A ++ E + EL Sbjct: 282 VDSQAAQQIFA---DLIAQDPGNPEAHLHLAWTLMWEAWATRASAEK-IRDISELGQKAI 337 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + DG+ I G++ +S+ +QA +A + RA + EA Sbjct: 338 KLDNSDGRAFWIAGVMESWLRNFDLSNRFIDQAIELCPSLALAHMQRASNRIYEGHPAEA 397 Query: 392 RICIDKSLQLEP 403 I+ + +L P Sbjct: 398 LKSIETASRLSP 409 >UniRef50_Q12IY1 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12IY1_SHEDO Length = 691 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 S+ E L E L QV + K + +L L++ G V+ ++ I ++W N +V Sbjct: 2 VSFKLAEYLVYPEHNKLELNGVQVKVEPKIMEILCFLIQHRGQVISREYIATNLWPNSVV 61 Query: 67 SDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQV 105 + +TR I+ LR + + IETI +KGY F + Sbjct: 62 GLDVVTRAIFELRKVLNDSAQNPIFIETIAKKGYCFIYDI 101 >UniRef50_A7HB42 Transcriptional regulator, SARP family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HB42_ANADF Length = 636 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 102/341 (29%), Gaps = 33/341 (9%) Query: 73 RCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTL 132 RC +LR ET+ R+ +G+ + T +A+ PF + Sbjct: 208 RCRETLRRELSVAPAPET-ETLRRE---LAGE--TPRAEPSPTRTPGLAVLPFELL--SA 259 Query: 133 DPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSR---FKPDYFVTGRINQ 189 DP ++ + + I L + F + + R DY + + Sbjct: 260 DPA--HEAFARGLQEDVIGAL-------SRFRTLRVVAPAAGRREAPAGVDYLLVATVRA 310 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQD 247 + L A+ + S D + + + + + L Sbjct: 311 ACGRLRVAARLAVAQGDAQLWSERFEGDLADAFALQDRVAEAVAGALALRIDEAELRAAA 370 Query: 248 QGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + + L G + L +PES A +F++ + L+ H Sbjct: 371 RLPPESLEAHALWLRGMQCLKRGSPESDLEARRLFEQ---ALARDRDYARAWAGLSLSHF 427 Query: 307 S----LALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFE 362 + A E E +A E D I+G I + + + Sbjct: 428 NDWSCAAWDRWDETER---RAFEYAAEAIRRDPHDPVTQCILGRILLYRREFERAAEHLS 484 Query: 363 QAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 +A + + + + A+ + + + E + + +L P Sbjct: 485 RAHALNPNEPDVLAHLAVGYAYLGEPERGLALGEAARRLNP 525 Score = 42.1 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 3/66 (4%) Query: 26 GNEQVYIPQKEL-GVLIVLLESAGHVVLKDMIIESVWKNIIVSD--ESLTRCIYSLRCIF 82 +V +P ++ +L L G V + + +W + + SL + + ++R F Sbjct: 16 DGRRVSLPTRKTEALLARLALRPGEPVSRAQLAGLLWPDRPDAQGRGSLRQALAAIRRAF 75 Query: 83 EKIGYD 88 E+ G Sbjct: 76 EEAGAP 81 >UniRef50_B8IB76 Adenylate/guanylate cyclase n=2 Tax=Methylobacterium RepID=B8IB76_METNO Length = 667 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 47/311 (15%), Positives = 105/311 (33%), Gaps = 13/311 (4%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMA 159 S + ++ + + SI + PF + + L + + I+ +I+G + + Sbjct: 253 SANPVRPQLQDSLAARLSIVVLPFASRDGGPEYERLAESIAAEITSDLSRIEGSFVIASS 312 Query: 160 ATNFCNDH-ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD- 217 D + Y + G + + LID I + D Sbjct: 313 TALAYKDKLADVRDLGRELRVRYLLNGSLRHTGTRVRINARLIDTVTGAEIWAERFKSDA 372 Query: 218 -ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYD-FTPESI 274 + + ++ I + ++ + + N+ +D G L + ES+ Sbjct: 373 SAISDIEDDVVAQITRALNIELTEAEVRQFQHERPNNPDAADLAAHGWSVLNRPLSRESL 432 Query: 275 YRAMTIFDRL--QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 RA T+F++ ++ ++ L + + S+L A L+D V Sbjct: 433 LRARTLFEQALKRDGESVRARVGLARSLALMVNFGWSTSVTSDLAR----ADYLVDTVLA 488 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + I G I Q + + + A ++ +A Y A + +EA Sbjct: 489 SRPDEAMAYCIKGEILRGQKQYEAAVAAHQTAIAYNASLAPAYGSMANAKLQLGQADEAF 548 Query: 393 ICIDKSLQLEP 403 +++++L P Sbjct: 549 ALAERAVRLSP 559 >UniRef50_B9BNS9 Transcriptional regulator n=2 Tax=Burkholderia multivorans RepID=B9BNS9_9BURK Length = 963 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 46/119 (38%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + F + L +G + + + + +L+VL+E AG +V K+ + W Sbjct: 5 DHCFTFGDFHLFPTQQRLLRGEIPIALGSRAMEILVVLIEQAGQIVDKETLTRRAWPTTF 64 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 V + +L I +LR I + +GYRF+G V + T P Sbjct: 65 VEESNLRAQIAALRRALGDGKSPLLIANVPGRGYRFTGPVVQNPAGASATVSRGRQQLP 123 >UniRef50_C5SN08 Transcriptional regulator, CadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN08_9CAUL Length = 651 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 64/449 (14%), Positives = 133/449 (29%), Gaps = 83/449 (18%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 +T+ + I + + VL +L G VV +D ++++ W VS++++ R + Sbjct: 20 PAACEVTRETKVWVIEPQVMRVLALLGLHHGQVVSRDDLVKACWDGRAVSEDAINRVLSR 79 Query: 78 LRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLN------- 130 LR + G I T+ + GYR +T E T+ P + Sbjct: 80 LRQLGRDSGDFH-IRTVRKVGYRLEILEPETAPEETITAAP---PTPAGHRSSINKLWLL 135 Query: 131 -----------------TLDPLILNQELVQIISNKKIDGLYTYP---------MAATNFC 164 T ++ + I++ + DG P + Sbjct: 136 GAGAAAALVLAIMLWWSTTQRPLVQKGFSLAIADIRADGPAALPPERLRSQLTHTLSQMR 195 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL---------- 214 + + S DY ++G ++ A + + L + ++ I S Sbjct: 196 GLKLVAKTKGSE-GADYILSGYVSGTQASPNIELTLSETRSHTQIWSARFDQALMSEPTA 254 Query: 215 PVDELHNTSQFIIDNILQTVHKP------------------ERSVRLAKQDQGYKNHYLS 256 P + T++++ + Q V P +R++ A + +N Sbjct: 255 PERAVAATARYMAVVLGQRVVGPRSTGDPPPVEVATQINEGKRALSQAHDARHNRNWPRF 314 Query: 257 DEMLAGK-KELYDFTPESIYRAMTI-FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS 314 D+++A A + + + E +S Sbjct: 315 DQLMAEVDSHATRALAIEPQSAGALMLKYEVDALPLYPRPGE---------------NRS 359 Query: 315 ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASL 374 E Q+AL + + ++LA G + S L ++ + Sbjct: 360 EFAERQQRALSFVTRAVTSDPDNPEVLAAAGRDMMERQRWDDSERLLIRSVAIDPNSRDG 419 Query: 375 YYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + E S L P Sbjct: 420 NLWYTYYLGLMNRCGEGLKFARLSAALAP 448 >UniRef50_A3W4X2 Adenylate/guanylate cyclase n=2 Tax=Roseovarius RepID=A3W4X2_9RHOB Length = 592 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 45/303 (14%), Positives = 101/303 (33%), Gaps = 14/303 (4%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFCNDHI 168 + S+ + PF ++++ L + + + N + L+ ++ + + Sbjct: 184 TQSADRPSVIVLPFDNLSSSVEDGFLADGIAEDLINELSRFRSLFVIARGSSFAYKDRAQ 243 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFI 226 + Y V G + + A + +LI+A+ I S+ D +L I Sbjct: 244 DMRQIAQDMRVRYVVKGSVRRAGARLRVTAQLIEAETGHQIWSDRYDRDMADLFALQDDI 303 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLS--DEMLAGKKELYDFTPESIYRAMTIFDRL 284 I+ T PE + LS + G E+ T I A +F Sbjct: 304 TRCIV-TGLTPEIGAHERAMSRAKPTESLSAWEMCQRGLTEIDMRTTGGIRNATALF--- 359 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAI 343 ++ + L+ H G+S K + + ++ Sbjct: 360 HAAAEADPTYALPHALIGRVHAVRIYSGRSRNPREDVIKGMYHGNRAIELDDRLELGHIT 419 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNE--KIEEARICIDKSLQL 401 + + L GQ K + +A+ + + A +Y + ++ + E ++++L Sbjct: 420 LAQLLTLQGQEKDARDALARARALNHNDALVYNAQTFINLFQKTPDTAEMEEAGLEAIRL 479 Query: 402 EPR 404 P+ Sbjct: 480 SPQ 482 >UniRef50_D0XWC9 Transcriptional regulator, winged helix family n=2 Tax=Caulobacter segnis ATCC 21756 RepID=D0XWC9_9CAUL Length = 955 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 31/217 (14%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 S+ F L L +L +G V I + LG+L L+E AG VV K + VW + IV Sbjct: 12 SFAFGPFLLLPGRQLLLEGETPVRIGNRALGLLTALVERAGEVVTKRELFAKVWPDTIVE 71 Query: 68 DESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 + +L + +LR + + R I T+ +GY F V E Sbjct: 72 EGNLKVHMVALRRVLRQEAGTRYISTVIGRGYCFVAPVRTLSGREALVDRPV-------- 123 Query: 128 SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 ++ + P A + V + Sbjct: 124 ---------------------EVRRAHNLPAGAARLLGREDVVGAIREELGEARLV--SV 160 Query: 188 NQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQ 224 + + L A+ + + + + +L Sbjct: 161 VGPGGIGKTSVALAVAERMTGVVRDGVWFVDLSPIKD 197 >UniRef50_A6D228 Putative transmembrane adenylate cyclase n=1 Tax=Vibrio shilonii AK1 RepID=A6D228_9VIBR Length = 551 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 36/344 (10%), Positives = 101/344 (29%), Gaps = 29/344 (8%) Query: 88 DRCIETIYRKGYR--FSGQVFKTKINEDNTSD----------YSIAIFPFTTSLNTLDPL 135 D + +I + Y F+ QV + + + ++ + PF + + + Sbjct: 116 DPIVLSIPKGRYSPLFTPQVPQAARQTASLAQFARETQKSLSPTLTVLPFLSLSDDPEKR 175 Query: 136 ILNQELVQIIS--NKKIDGLYTYPM----AATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + + ++ + D L M + + + +G + Sbjct: 176 FFAEGFGEELATELARFDMLKVVSMHALGETSIDPRTSADVKGLGEKLGVSFITSGTMQA 235 Query: 190 NNAVNTLYIELIDAKNLFLIASN----HLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 +Y +L + + + L D+L + II ++ + + Sbjct: 236 LGNKVRIYAKLYRTDSGEQVWAEKYTCDLATDDLFSVQDDIIAEVVAELASSFGIIHREI 295 Query: 246 QDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 + + L + L + ++ +A + + + +L Sbjct: 296 YQSCNQKKIEHLSTYEATLRYRHYLMTLSEDTHQQATQAL---LSAVQNEPDVALLHAML 352 Query: 302 AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILF 361 A + + G ++++ A + AL ++ + + M + ++G Sbjct: 353 AVLYFDADMLGMNKVDSAVETALNYAKRAVELEPTNQESQIAMLMAHQVAGDVNSVIETV 412 Query: 362 EQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 ++ + + A + + I S L P R Sbjct: 413 DKVIAINPNAAYQIGLSGWALCMAGEFDRGLQLIQDSKALNPFR 456 >UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK09_SHEWM Length = 711 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 50/302 (16%), Positives = 102/302 (33%), Gaps = 39/302 (12%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 M L E L E + I ++L +L +L++ G V +++I++ + Sbjct: 1 MSLSCSSKVMVNEIEVDFVALKLLIDGEWLEIEARQLALLKLLIKHHGEAVSRNLIMDEI 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 W + IVSD S+++ I LR + G R I T+ R GY+ + + K E S Sbjct: 61 WHDTIVSDNSVSQAITQLRKSLQDDKGTPRFIRTVPRVGYQLIATIEEVKEPE---SLEG 117 Query: 120 IAI-----FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFL 174 +++ P T + ++L L Q+ + P + Sbjct: 118 LSVVKRTSKPTTALIGIALGMVLMFGLFQLTKPS-----LSLPTYEYETRLTSVPGPEGF 172 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTV 234 R+ PD + ++ D ++ + + +H+ Sbjct: 173 LRYSPD-----------GRYLAFSQISDNRSQMDLVVYDSQTETIHSIKST--------- 212 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 E + D + +Y D + + + TP +R ++ D + Sbjct: 213 GYSEEAPEW-SPDSQWLIYYRHDPLSCDIRIMSVSTPVETWR----LSPDRHLGDCEPGY 267 Query: 295 TE 296 + Sbjct: 268 SR 269 >UniRef50_B1ZTA9 Transcriptional regulator, CadC n=1 Tax=Opitutus terrae PB90-1 RepID=B1ZTA9_OPITP Length = 584 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 26/115 (22%), Positives = 50/115 (43%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F L G ++ + + +L+ L+ VV KD +++++W +IV Sbjct: 1 MIFRFGRFELDEARRELRLGPRRLELQPRTFDLLVYLVRHHERVVSKDELLQALWPGVIV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 +D S+ R + +R G I+T R+GYRF+G++ + A Sbjct: 61 TDSSVMRAMSLVRSALRAGGAANLIDTFSRQGYRFTGELLDGVPAPRRNQHLARA 115 >UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PB9_PSEA6 Length = 756 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 1/102 (0%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y + +T +P K L VL L + G VV ++ ++ VWK+ +VS Sbjct: 4 QYWIGDFFVNLPRNQITHNEHTQTLPPKALAVLTYLAKHQGDVVSQEDLLNQVWKDTVVS 63 Query: 68 DESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKT 108 SL RCI LR F G I+T +KGY + Sbjct: 64 PNSLQRCIAQLRKAFGDDGKAQGLIKTHAKKGYSLEAAIRWE 105 >UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobacteriaceae RepID=C5B7S6_EDWI9 Length = 548 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 4/126 (3%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + ++ E L L D +T+ + + + + +L V+ +D +I++VWK I Sbjct: 3 EQTFRVGEWLVLAADNKITREGRVLVLEPRLIDMLSYFAHHPDMVLSRDELIDNVWKRNI 62 Query: 66 VSDESLTRCIYSLRCIFEKI--GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 V++ +T+CI LR + I T+ ++GY+ V E++ A+ Sbjct: 63 VTNHVVTQCISELRKYLKDGRPEAPEYIVTVPKRGYKLVESVIW--CGEESLEQLVAAVL 120 Query: 124 PFTTSL 129 P T Sbjct: 121 PAETPS 126 >UniRef50_D1TLZ3 Transcriptional regulator n=3 Tax=Burkholderia RepID=D1TLZ3_9BURK Length = 849 Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 66/180 (36%), Gaps = 18/180 (10%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 ++S F +LT+ ++V I + L +LIVL E G +V + + VWK + Sbjct: 4 RYSLTFGPFRIDFPQRVLTRNGDEVRIGSRALDILIVLAERGGELVSTRQLRDQVWKESV 63 Query: 66 VSDESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKIN---------EDNT 115 V D +L + +LR R I +GYR + V T+ +T Sbjct: 64 VDDGALRVHVSTLRKALSDGQSESRYIVNDNGRGYRLAAPVHSTRATQVTAPAPTAPTST 123 Query: 116 SDYSIAIFPFTTS--------LNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDH 167 D S P T + ++ L + + L+ I I A FC Sbjct: 124 PDESARALPVTLTRVIGREDVIDGLTDQLPERRLLTIAGPGGIGKTTVAVAIAHRFCGRT 183 >UniRef50_Q0HTC3 Lysine decarboxylase transcriptional regulator, CadC n=3 Tax=Alteromonadales RepID=Q0HTC3_SHESR Length = 1075 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 1/113 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + ++ E L G + + K + VL+ L ++AG VV D I+ W + Sbjct: 2 SDSTFFLGEWQVNPSANSLLLGKQVKQLEPKAMDVLLFLCQNAGEVVSSDEIVSHCWPGV 61 Query: 65 IVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTS 116 D L + I LR R IETI ++GYR +V +E + + Sbjct: 62 DTGDNPLHKIINQLRRALGDSATESRYIETIRKRGYRTLAEVRFPVGHEASAT 114 >UniRef50_A1TAL1 Transcriptional regulator, CadC n=7 Tax=Mycobacterium RepID=A1TAL1_MYCVP Length = 436 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 1/99 (1%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + + + + L +G+ + + + VL L+ + G V K+ + ++VW V + Sbjct: 37 WRWDDFVLDVGCYELRRGDTMIRVEPQVFDVLAQLVSNHGRFVSKEELFDTVWGGRFVGE 96 Query: 69 ESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVF 106 +LT I ++R G R I T+ +GY+F G++ Sbjct: 97 AALTSRIKAVRRALGDDGEAQRYIRTVRGRGYQFVGRLL 135 >UniRef50_Q1MK13 Putative transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MK13_RHIL3 Length = 968 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 1/113 (0%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 SY F + + E L + V + + L +L L+E G +V K ++ VW + V Sbjct: 3 SYFFGPYVLVPERQSLMRDQTAVRVGSRALEILAALIERPGELVGKAELVSRVWPDTFVE 62 Query: 68 DESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 + +L + +LR G + I T+ +GYRF V + ++ + + S Sbjct: 63 ESNLKVNVAALRRALGDAPGDMQYIATVSGRGYRFVFPVRISGQSDTSVTATS 115 >UniRef50_Q7NN29 Serine/threonine kinase n=1 Tax=Gloeobacter violaceus RepID=Q7NN29_GLOVI Length = 995 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 100/299 (33%), Gaps = 14/299 (4%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCNDHIS 169 N +++IA+ PF + + I+N+ KI L +A + S Sbjct: 478 SNPPNHAIAVLPFVNLGGDKQSAYFSAGMAVDITNQLGKIADLKVIASSAAAQYAESPKS 537 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHNTSQFII 227 +TG + + + +L+D + S + ++ + + Sbjct: 538 LGEIARELGVSSVLTGSVRREGNKVRIVSQLVDPATGEQLWSGDYDRQLSDVFKIQEDVA 597 Query: 228 DNI---LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRL 284 I LQ P R+ + G Y D L G++ A+ +F R Sbjct: 598 QQIAGRLQAKLSPAEKERVTQTPTGNITAY--DYYLKGREYFERGRNAENDLAIELFKR- 654 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 ++ + L + A+ S+ ++ + +L I G+ + Sbjct: 655 --ALALEPNYALAHAALGNAYFRKAVD-YSQGDVWLEASLGASRKALAIDPQLGEAHRAL 711 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 G G + + + +A + + A+ V+F ++EE +++ L+P Sbjct: 712 GNGLRGKGFFRKAQDAYRRAIALAPNNAAALGSYGSVNFIRCELEEGVNWTLRAVALDP 770 >UniRef50_A3D2S0 Transcriptional regulator, CadC n=3 Tax=Shewanella RepID=A3D2S0_SHEB5 Length = 1067 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 1/102 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + ++ F E L G + + K + VL+ L + AG VV D I+ W + Sbjct: 6 SDSTFFFGEWQINPSANSLLLGKQVKQLEPKAMDVLLFLCQRAGEVVSSDEIVSHCWPGV 65 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQV 105 D L + I LR + D IETI ++GYR +V Sbjct: 66 DTGDNPLHKIINQLRRALDDSATDPIYIETIRKRGYRTLAEV 107 >UniRef50_B4RU42 Transcriptional regulator n=2 Tax=Alteromonas macleodii RepID=B4RU42_ALTMD Length = 1092 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 ++ + L+QG + I K + VL++L + G VV D I+ W N + Sbjct: 4 QFYLGQWRVDVSSNTLSQGKTKKSIEPKAMDVLLLLCQQKGLVVSADEIVAQCWPNAPIG 63 Query: 68 DESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQV 105 D + + I +LR IETI ++GYR +V Sbjct: 64 DNPVHKAITNLRRALGDKAAAPSYIETIRKRGYRVVAEV 102 >UniRef50_Q1ITM5 Serine/threonine protein kinase with TPR repeats n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITM5_ACIBL Length = 757 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 53/362 (14%), Positives = 121/362 (33%), Gaps = 31/362 (8%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA 160 G + S+A+ F + + + I KI L +P + Sbjct: 320 GSSTSVASAPAQSKQKSVAVLYFANQSGAKEDEYFRDGITEDIVTELSKIAQLEIFPRSE 379 Query: 161 T-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVD 217 F + ++ + Y + G I + + ++L++ + ++ Sbjct: 380 VLAFRDQPVTAQQVGQKLGAGYVLEGSIRRAGNRVRITVQLVEVSTRHSAWAERYDRQLE 439 Query: 218 ELHNTSQFIIDNILQTV---HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESI 274 ++ + I +I Q + P+ +AK+ Y D L G+ E Sbjct: 440 DVFAIQEEIARSIAQALRITLTPQEEKTIAKKPTENPQAY--DFYLRGRSYTRR---EKF 494 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAE-CHMSLALHGKSELELAAQKALELLDYVSDI 333 A+ +F+ + + + + + C + L + + + L D + + Sbjct: 495 DYALQMFEHV---IQLDPNFALAHAGIGQICGLMFELR--EQNQKWIDRGLAACDRATAL 549 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 +L ++ + + + +L ++A D + +F + + E A Sbjct: 550 APDLPDVLVARARVSYAQKKYEEAALLAQRAVERKPDAEGSWDIMGRAYFASGQFEAAAA 609 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLT 453 K+++ D P N + +E E+E RV I N+L+ +QL Sbjct: 610 ISKKAIEFNGD-----------DYNTYLPFINTMHRLGREDEAEELRVGIINVLR-QQLE 657 Query: 454 RI 455 R+ Sbjct: 658 RV 659 >UniRef50_P23890 Transcriptional activator cadC n=99 Tax=Enterobacteriaceae RepID=CADC_ECOLI Length = 512 Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 E L +++ Q+ + + + +L+ + +G V+ +D +I++VWK IV++ Sbjct: 7 RVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNH 66 Query: 70 SLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINE 112 +T+ I LR + D I T+ ++GY+ V E Sbjct: 67 VVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWYSEEE 111 >UniRef50_B6EKJ8 Putative transcriptional regulator n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6EKJ8_ALISL Length = 542 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 2/101 (1%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + + + E+ L + + +V + + + +L L + +G V +D +I+ VW Sbjct: 3 GLCFQINDWTLVIEENKLYRQDREVSVEPRLVNLLRFLAQHSGEVFCRDELIQHVWDGAF 62 Query: 66 VSDESLTRCIYSLRCIFEK--IGYDRCIETIYRKGYRFSGQ 104 V+D+ +T+ I+ LR I + R + T+ ++GY+ Sbjct: 63 VTDQVVTQSIFELRKILRDGRLDNARYLVTVPKRGYKLVAD 103 >UniRef50_A2SGK5 ATPase-like protein n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SGK5_METPP Length = 977 Score = 106 bits (263), Expect = 3e-21, Method: Composition-based stats. Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 2/111 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + + +L + + + +P + VL L+ G +V KDM++++VW + VS+ Sbjct: 10 RFGDFELDEANAMLKRHEQALDLPPRAFSVLCELVRRPGQLVTKDMLLDAVWGHHHVSES 69 Query: 70 SLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 L + +LR F+ R IET R+GYRF V + + + + Sbjct: 70 VLKSAVRTLRAAFDDDARAPRFIETASRRGYRFIA-VPGPERRPTSVARSN 119 >UniRef50_C5D0W4 Transcriptional regulator, CadC n=1 Tax=Variovorax paradoxus S110 RepID=C5D0W4_VARPS Length = 188 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F E G L QG + + K +L L + ++ K +++S+W +++V+ + Sbjct: 30 QFAGFEFDFERGQLRQGGTLIPLSPKPDALLRFFLANPQRLIGKTELMDSLWPDVVVTHD 89 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN 114 SL CI LR G I T R+GY F +V +++ + Sbjct: 90 SLVHCIGELRSRLGDHGAT-LIATSPRRGYMFDAEVLPVQLDRAD 133 >UniRef50_A3WEA4 Adenylate cyclase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEA4_9SPHN Length = 775 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 73/507 (14%), Positives = 161/507 (31%), Gaps = 70/507 (13%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 +DL + + L +T + + + K + VLI L G ++ +D +I+ Sbjct: 19 VDLAHHGDFRLGSILVQPSLRRITGPDGERMLEPKVMQVLIALSSPVGTILSRDDLIDRC 78 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYRFSG----QVFKTKINEDNT 115 W +V D S+ R I LR ++ D +E + + GYR K D Sbjct: 79 WDGRVVGDTSINRVISILRTGLREVAGDAAVVENVPKVGYRIVVREAPDDVLEKPAPDVI 138 Query: 116 SDYS-----------------------IAIF----------PFT-TSLNTLDPLILNQEL 141 + +A+ PF + T+ +L E+ Sbjct: 139 EQPTKPKVAATRRLQANRRATIIIAGALAVLALVGAAIWLKPFAGGPVGTVRMAMLPLEI 198 Query: 142 VQIISNKKIDGL---------------YTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 + + GL T +A +++ ++ + +GR Sbjct: 199 SEGVDPIYAAGLESELRAEFARVGAMEVTASESAKLLLGENLEPAEIGTKLGVQFVWSGR 258 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQ 246 L + +++++ + S + + +++Q + + V A Sbjct: 259 FEVEAERIVLDVNVVNSETGETVLSQSV--NSATDSAQSLPFRTARAVATALDRPVRATA 316 Query: 247 DQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 Q + L L + + A I + + + + + LA + Sbjct: 317 TQETISASDFRLYLVATGLLKTRGQDQVGAAREILELV---TARNGDFADGWGALAMAYF 373 Query: 307 SLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 S++E KALE + I L + G+ A+ + + Sbjct: 374 LQRPSDPSQIEGNLAKALETAEKAVAIEPNTIGALKVFGMSA---KDAETALASLGRVVK 430 Query: 367 HSTDIASLYYYRALVHFH-----NEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPN 421 + +++ +V + + AR I+ P + + E DM + Sbjct: 431 LDPGDSEGWFWLGIVQRRFVLDGADPLTSARTMIEIDPLWPPSWNGSTLAAEFGDMQMAR 490 Query: 422 PLKNNIKLYYKETESESHRVIIDNILK 448 ++ +I + + S R++++ L Sbjct: 491 EMEQDI---LAASVTPSQRLLVEARLA 514 >UniRef50_B8JG07 Transcriptional regulator, CadC n=3 Tax=Anaeromyxobacter RepID=B8JG07_ANAD2 Length = 396 Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats. Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 1/115 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + ++ F L E + + VL L+ + +V+KD ++ +W + Sbjct: 2 GRMTWRFGAYELDPARRELRVAGEPRALQPQVFEVLTYLVRNRHRLVVKDELLRELWPDA 61 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 IV+D SL R + R + T R+GYRF G+V +T+ + +T+ + Sbjct: 62 IVTDASLQRAVSLARRALRPADRG-LLRTHARQGYRFVGEVVETEPDPADTAAEA 115 >UniRef50_Q5E341 DNA-binding transcriptional activator CadC n=9 Tax=Vibrionaceae RepID=Q5E341_VIBF1 Length = 541 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 54/115 (46%), Gaps = 2/115 (1%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + + + E+ L + + +V + + + +L L + +G V +D +I+ VW Sbjct: 3 GICFQINDWTLVIEENKLYRQDREVSVEPRLINLLRFLAQHSGEVFCRDELIKHVWDGAF 62 Query: 66 VSDESLTRCIYSLRCIFEK--IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDY 118 V+D+ +T+ I+ LR + + R + T+ ++GY+ + + ++ + Sbjct: 63 VTDQVVTQSIFELRKVLRDGRLDNTRYLVTVPKRGYKLVAETKQIRLEDTPYWKP 117 >UniRef50_A3SM14 Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SM14_9RHOB Length = 420 Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 8/133 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F +L + E V++ + +L VL E AG ++ K+ ++E+VW+ + + Sbjct: 1 MVYRFANCRLDPARHLLLRDGEPVHVEPQVFTLLQVLAERAGQLITKEELVETVWRGLAI 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCI-ETIYRKGYRFSGQVFKTKINEDN--TSDYSIA-- 121 SD +++ I + R G + I +T++ G+R V + + S + A Sbjct: 61 SDATISARISAARKAIGDTGQAQAILKTVHGCGFRLVAPVSTDQAGGPDKAQSRPATAKA 120 Query: 122 ---IFPFTTSLNT 131 + F S + Sbjct: 121 QRHVLRFAQSADG 133 >UniRef50_Q89CU8 Bll7697 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CU8_BRAJA Length = 393 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 43/295 (14%), Positives = 89/295 (30%), Gaps = 8/295 (2%) Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 PFT S L A + I + Sbjct: 2 LPFTNLSGDPGQDYFAHGRPDNRSLANSGQLRIARNTAFTYKGKSIDARQIGRELGVRFA 61 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERS 240 + G + + + +LID + + S+ I I +T+ Sbjct: 62 LEGSVQRVGDQVRVNAQLIDTETGGHVWSDRFDRLRSNYLELQDDITGRIARTLGLELVV 121 Query: 241 VRLAKQDQGYKNHYL-SDEMLAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + + ++ + SD L G +Y TPE+ A +F+ +I Sbjct: 122 LAARSIELEHQTNPTASDLALQGWAAVYKPTTPETREEARRLFEH---ALEIDPHTLRAM 178 Query: 299 CLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 L+ +L ++G+S + +A EL + + A+ + K + Sbjct: 179 TGLSLTLANLVINGQSPDPAGDLSRADELSQQAVGLDPNNAAAHALRARALQAQRRQKEA 238 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + + + +IA+ + K +A D++++L PR + Sbjct: 239 AEQYRISLQINGNIATTTLFLGETFVFTGKSLDAIPLFDRAIELSPRDPGLGTWQ 293 >UniRef50_C1F3P9 Transcriptional regulator, putative n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F3P9_ACIC5 Length = 588 Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 54/118 (45%), Gaps = 4/118 (3%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F E+ L +G++++ + + VL L+E G ++ D I++++W V + Sbjct: 3 QFGAFRLDAENQCLWRGSKRIAVRPRPFAVLEYLVEHPGRLISHDEILDALWPETFVQPQ 62 Query: 70 SLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRFSGQV---FKTKINEDNTSDYSIAIF 123 L + LR + + + IET+ ++GY+F V + + +++ + A Sbjct: 63 ILRTYMLDLRKVLGDDAAEPKYIETLPKRGYQFVAAVSTYSPSAVKAADSAAETGASL 120 >UniRef50_A4A737 Membrane protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4A737_9GAMM Length = 758 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 39/298 (13%), Positives = 98/298 (32%), Gaps = 14/298 (4%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAAT-NFCNDHISQNSF 173 + SIA+ PF + + + + + + N +I L ++ F D+ + Sbjct: 164 ETSIAVLPFVNLSSDPEQEYFSDGISEELLNVLAQIPALRVAARTSSFQFKGDNRDISEI 223 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNIL 231 + K + + G + + + +LI+A+ + + S ++++ I I Sbjct: 224 AALLKVGHVLEGSVRKAGTRLRITAQLIEAEGGYHLWSETYDRELEDIFAIQDEISAAIA 283 Query: 232 QTVHKP--ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + + N + L G+ + ++I + +R Sbjct: 284 DALRAELALDEAMKPGASRVAANTPAYEAFLKGRALINQRGQQAISEGVEQLER---SVR 340 Query: 290 IQTLKTECYC----LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + +A S +G +E ++A E + + ++ A Sbjct: 341 LDPGYAPARAQLAIGIALLANSSGTYGDLSVEEVNERAGEQIAAAEALDNDFAELWAARA 400 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 +++ ++ + E+A + + +R EA + LQL+P Sbjct: 401 MLSRINFDNRGYLENSERALAIRPNYSDALNWRVNGLNSLGMWAEASEAREALLQLDP 458 >UniRef50_UPI0001AF360D LuxR family transcriptional regulator n=3 Tax=Pseudomonas syringae group RepID=UPI0001AF360D Length = 939 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N + HF L + +L + ++ V + + + +L+ G ++ K ++ W Sbjct: 22 NHEAIHFGSFTLLPREYLLLKDSQPVPLGSRAMALLVAFATRPGELLEKAELLTLAWPRA 81 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 +V + +L I +LR + I T+ +GYRF V + S P Sbjct: 82 VVEECNLRAQIVALRRALND--EENYIVTVPGRGYRFIAPVSVQPAIRPVPAPTSADTLP 139 >UniRef50_B1YN09 Transcriptional regulator, winged helix family n=3 Tax=Burkholderia RepID=B1YN09_BURA4 Length = 481 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 48/353 (13%), Positives = 118/353 (33%), Gaps = 44/353 (12%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 E L + +V + + +L V++ ++G +V KD ++++VW + V + + Sbjct: 26 LGEFELNLGMRALYKAGREVPLGSRAFDILSVIVLASGRIVSKDELMDTVWPGVFVEENN 85 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLN 130 + + ++R + + I+T+ +GYRF + + A F + Sbjct: 86 IHVHLSAVRKALGD--HRQLIDTVPGRGYRFKVFDGMSAEPGRDVPTERHAPL-FRNADT 142 Query: 131 TLDPLILNQELVQII----SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 P ++ + +I+G + T + + Sbjct: 143 MTPPRHRLPGRRTLLGRATALDEIEGRFALSRVVTLTGPGGVGKTCLAIEHAHR------ 196 Query: 187 INQNNAVNTLYIELIDAKNLFLI----------ASNHLPVDELHNTSQFIIDNILQTVHK 236 + ++I+L +A++L + A L +D + + D + + + Sbjct: 197 TTAAGTSDVVFIDLEEARSLAAVSQIGPAPSRPAGTLLVLDNAEHIVDEVADLVERLIG- 255 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR----AMTIFDRLQNKSDIQT 292 + S +L +E PE+++R A+ + ++K Sbjct: 256 ----------------QWHSLRVLLTSRERLRIAPETVFRVEPLALPADESCRDKLMQSP 299 Query: 293 LKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + C + + + L + L+ L ++ +L I G Sbjct: 300 AVELFLERASRCGVRVDDEHQLRLVAEICRRLDGLPLAIELAAGRASVLGIEG 352 >UniRef50_B1KAJ7 Transcriptional regulator, winged helix family n=3 Tax=Burkholderia cenocepacia RepID=B1KAJ7_BURCC Length = 493 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 2/94 (2%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L + + +++ + VL VLL +AG +V KD ++ +VW +V + +L I +LR + Sbjct: 15 LRRDGKAIHVGSRAFDVLAVLLSAAGRLVTKDELMAAVWPGTVVEENNLQVHISALRKLL 74 Query: 83 EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTS 116 I T+ +GY+ + + + T Sbjct: 75 GP--QRDLIVTVPGRGYQLTQKSAPSANLTPATP 106 >UniRef50_C3KKU6 Putative transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKU6_RHISN Length = 927 Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 85/271 (31%), Gaps = 30/271 (11%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 +HF L + + + + + +L+ LL G + I+ VW + V + Sbjct: 5 FHFGSFSIAPARRSLLRNGSVIPLGSRAIDILLFLLSHPGELKTNAEIVRQVWPDTFVEE 64 Query: 69 ESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +L + +LR + I + +GYRF + + S S+ Sbjct: 65 ANLRVHLSALRKALGDTQREPQFIANVPGRGYRFIAPI--ERRGRAVVSSPSL----LRL 118 Query: 128 SLNTLDPLILNQE--------------LVQIISNKKIDGLYTYPMAATNFCNDHISQNSF 173 P I +E LV + I +N +D Sbjct: 119 RAERPPPRIFGRERVVATILDQLGRGRLVTVAGPGGIGKSTVARAVVSNLTSDSEVLWID 178 Query: 174 LSRFKPDYFV-------TGRINQNNAVNT-LYIEL-IDAKNLFLIASNHLPVDELHNTSQ 224 LS F + G +++ + + + + L A L + + H+ V Sbjct: 179 LSEFANGDLIPTVVASALGVLSRTDDIIRDIALALQSRALLLVMDSCEHVVVSAAEFVEN 238 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYL 255 + D + R A+ ++ ++ L Sbjct: 239 LLADTANLRILATSREPLRAEGERVHRLLPL 269 >UniRef50_Q89XL4 Transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89XL4_BRAJA Length = 989 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 1/110 (0%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + + + + + +L+ L+ AG+VV K ++ + W V + S Sbjct: 52 FGPFRLDPSQRRVERDGSPLQLSGRAFDILLALVRQAGNVVSKTELMATTWPGAAVEENS 111 Query: 71 LTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 L I +LR R + T+ +GY F V + + + ++ + Sbjct: 112 LRVHIAALRKALGDGNDGVRYLSTVSGQGYCFVAAVSRPEQRQPAPTNPT 161 >UniRef50_C7RJ06 Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RJ06_9PROT Length = 975 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 4/120 (3%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + L + V + + VL L+ AG ++ + +++ VW + V+D Sbjct: 20 RFDRFELDEANARLLRDGTAVALAPRPFAVLCALVRHAGSLLTTNALLDEVWGHQFVTDS 79 Query: 70 SLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKIN---EDNTSDYSIAIFPF 125 L I LR + + R IET+ R+GYRF + + S ++ A P+ Sbjct: 80 VLRTAISELRTVLDDDARKPRYIETVSRRGYRFVAAPSALAAAPGVQPSVSGFTAAHVPY 139 >UniRef50_Q1MMK4 Putative transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MMK4_RHIL3 Length = 954 Score = 104 bits (258), Expect = 1e-20, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 1/112 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N +Y F + + +L + + + + +L L+ G VV KD + + W N+ Sbjct: 8 NVTTYCFGDCRFIPARQLLLHREVPIRVGSRAIDLLHALVRRPGIVVSKDELFRAAWPNV 67 Query: 65 IVSDESLTRCIYSLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTKINEDNT 115 V + +L I LR ++ D CI T+ +GYRF + + ++ Sbjct: 68 FVDESNLKVNIAVLRRALAQVEPDLTCIATVPGRGYRFVAPLRVLGVADEAA 119 >UniRef50_B1T3M3 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3M3_9BURK Length = 934 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + F ++ L +G+E I + +L +L+ G VV + E VW + Sbjct: 6 RTCISFGSFRLYPDERRLERGDEIAEIGNRAFDILSLLVHRPGEVVSQKEFQEKVWPGSV 65 Query: 66 VSDESLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSD 117 V D +L I +LR + E I +I +GY F G V T +N ++ Sbjct: 66 VGDVNLRVQITALRKLLSEDAASSHGIRSITGRGYCFVGPVTYTTLNNTAAAE 118 >UniRef50_B0SVQ0 Transcriptional regulator, winged helix family n=1 Tax=Caulobacter sp. K31 RepID=B0SVQ0_CAUSK Length = 954 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 4/133 (3%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F L +LT+ V + + L +LI LL G V+ ++E W + V + + Sbjct: 20 FGPYLLAPGRRLLTRQGVPVAVGARALEILIALLSEHGRVLTHRQLVERAWAGLTVEESN 79 Query: 71 LTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 L + LR G R IE + +GY F V + + S +I P Sbjct: 80 LRVAVSGLRKTLGDGEGGARYIENVVGRGYCFVAPVRWLEAEPADASP---SIVPAKLRG 136 Query: 130 NTLDPLILNQELV 142 + I ++ Sbjct: 137 GSTRLPIPAARVI 149 >UniRef50_Q47YV7 Putative adenylate cyclase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YV7_COLP3 Length = 686 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 52/342 (15%), Positives = 103/342 (30%), Gaps = 37/342 (10%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSF 173 D +IA+ PF + + I S KI L ++ F N+ N Sbjct: 122 DLTIAVLPFKDMSPGGTQQYFGDGIAEEILNSLTKISSLKVIARTSSFQFRNEKKDINQI 181 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 + + + G I ++ + +LIDA I S + ++ + I Sbjct: 182 GKQLGAQFILEGSIRKSEDKLRVTAQLIDATTQHHIWSETYDKKLTDVFVLQDQLTFAIT 241 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 Q + L ++ + L + TP I A + ++ ++ Sbjct: 242 QALKLNILKGDLQSSALAKSDNPEAYKLYLKSLPLFHQRTPSGIKDAEKLLEK---AIEL 298 Query: 291 QTLKTECYCLLAECH--MSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 L + + + + E + A+ + L + + + Sbjct: 299 DHDFLLAKAQLYNLYARYNRYIRALNIEQQKNAELLIRDLLSSPEKFAEKSMAIGM---- 354 Query: 348 TGLSGQA--KVSHILFEQAKIHSTDIA---SLYYYRALVHFHNEKIEEARICIDKSLQLE 402 LSG+ S F+ + + +Y Y A ++ H + + L + Sbjct: 355 -WLSGEGYNVQSIEYFKHSVSEFPSSSELKFIYAYYANIYSHLSR-NDIIEMHKSVLSKD 412 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIID 444 P + N + LY KE R +ID Sbjct: 413 PLN--------------TSSRSNLMSLYQKENRLAEMREVID 440 >UniRef50_Q2NDU5 Putative adenylate cyclase protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDU5_ERYLH Length = 654 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 48/327 (14%), Positives = 93/327 (28%), Gaps = 43/327 (13%) Query: 119 SIAIFPFTTSLNTLDPLILNQELV-QIISNKKIDGLYTYPM--AATNFCNDHISQNSFLS 175 SIA+ PF T D L +I + + L ++ F S Sbjct: 204 SIAVLPFETIGGGEDQTWFADGLAAEIRARLAQNPLLKVAAKASSNTFRETEADAKEIAS 263 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQT 233 + K + + G + + + L D F +D + I ++ Sbjct: 264 KLKVAFLLNGDVRREGDQLRVTAALTDGSTGFTERQLSFDRAIDGVFEIQSAIAAAVIAE 323 Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + +Q G N + L G + T ++ R + + I Sbjct: 324 LTAQIEGRNTGEQIGGTDNVAAYEAFLRGNELFDAGTDQNTDR--QALAKFEEAVAIDPG 381 Query: 294 KTECYCL-----------------LAECHMSLALHGKSELELA----------------- 319 + AE + S A + + LA Sbjct: 382 YAAAHAGKSRAISVIGNLYTAPENRAEVYGSAAEAAREAVRLAPEFADGHSALGFAFANR 441 Query: 320 --AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 Q A + + + D +IL+ G A + E+A A ++ + Sbjct: 442 LDMQAARDPYERSYQLGAGDAEILSRYAKFRSRIGDADGASAAIERAVGLDPLNARVFVF 501 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPR 404 + + + EA D++ L+P+ Sbjct: 502 YGNIAYAAGRYAEAIDHFDEARALQPQ 528 >UniRef50_D2TZ50 Type III secretion transcriptional regulator HilA n=1 Tax=Arsenophonus nasoniae RepID=D2TZ50_9ENTR Length = 188 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + FL+ L + +L + E + IP KEL L L+ ++ ++ KD I+ VW+ V D Sbjct: 35 FQFLDYR-LHCNEMLMKNGEIIAIPPKELRALSCLVANSKKIIKKDDIVAYVWQGGEVKD 93 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQV 105 ES+ RCIYSLR +F++ + I TIY +GY F+G V Sbjct: 94 ESVVRCIYSLRKLFKQ---ENLIITIYGRGYCFNGDV 127 >UniRef50_C7RA75 Transcriptional regulator, CadC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RA75_KANKD Length = 741 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 27/99 (27%), Positives = 43/99 (43%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 L + L E+ I + VL+ ++ VV + +IE+VW +V D Sbjct: 6 KMGSWLVFPDRNSLIFQEEEHNIEPLAMDVLVYFTQNPQKVVSRSELIEAVWSGRVVGDH 65 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKT 108 S+ R I LR I + I+TI +KGY+ V + Sbjct: 66 SVYRIINKLRQILARDPSREYIKTIRKKGYQLVCDVSVS 104 >UniRef50_A0NQZ6 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NQZ6_9RHOB Length = 575 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 41/310 (13%), Positives = 97/310 (31%), Gaps = 18/310 (5%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNF 163 + +D S+ + PF S + IL + + + I + + + + Sbjct: 163 LPAQEEQDEVLKPSVMVLPFRVSSTDPEQQILAEGIAEQIMTALSRFPDFRIFWPPSGAN 222 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTS 223 + + + +TG + V + +L+ + + ++ S+ +T Sbjct: 223 GASTMDPVEIGRQEDVSFLITGAVGSEGGVIRVSAKLVHSPSRRVLWSSSYDRVRSRSTL 282 Query: 224 QFIIDNILQTVHKPERSV------RLAKQDQGYKNHYLSDEM---LAGKKELYDFTPESI 274 I ++I + LA N +D L G +F+ + Sbjct: 283 LEIEESIASDIATVAGQPYGVIKSELASTLPA-GNEPSNDSFECVLRGYVYRRNFSKQLH 341 Query: 275 YRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK---SELELAAQKALELLDYVS 331 + +R E + +L ++ A G ELA +AL+ + Sbjct: 342 ATVQSCLER---AVKRDPGYVEAWAMLGWIYLDAARFGLTADGSKELAFDRALDAASHAL 398 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + + L + I G + L ++A + + K +E Sbjct: 399 SLDGNNILALKALSSINHYMGNIEEGERLAKKALALNPNDPDTMAQLGWRLAVAGKFDEG 458 Query: 392 RICIDKSLQL 401 ++K+++ Sbjct: 459 ISYLEKAIER 468 >UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ML1_BRAJA Length = 944 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 66/179 (36%), Gaps = 2/179 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F L + +V I + +LI L E AG +V K ++ SVW++++V + Sbjct: 16 FFGRFQLDKRRRQLLKDGVEVRIGSRGFDILIALTERAGELVSKRDLLFSVWRDVVVDEA 75 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 L + SLR + R I T+ +GY F + + + N +S Y Sbjct: 76 VLRVHVASLRRALGEGQDGARYIVTVSGRGYSFVAPIERKRGNGLASSGYVPPPRHGRQF 135 Query: 129 LNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 + + E+V + + + + + + R + ++ G + Sbjct: 136 PSIPRLFVGRDEVVDDLCTLIVKQRFV-SVVGAGGIGKTTVAGAIIRRLQAEFGDEGAV 193 >UniRef50_Q98JC9 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98JC9_RHILO Length = 485 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 98/305 (32%), Gaps = 14/305 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDH 167 + +AIFP + L I+ + L Sbjct: 85 PPRLPGASPVLAIFPIECQTSEERWRRFADGLSSDITIDLARYADLPVIAFHTMKSLGSK 144 Query: 168 I-SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQ 224 + Y V+G++ + L IEL DA N + S V+++ Sbjct: 145 PADFAADGKALGATYVVSGQLRADERRVRLSIELADADNGVSLWSERYDRQVEDIFALQD 204 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLS----DEMLAGKKELYDFTPESIYRAMTI 280 + + ++ + ++ + + S D L G ++ F+ I A+ + Sbjct: 205 SLTETVINVIAGSYGALATVGRKAIRRKPPASLRAYDCYLLGVEQQDTFSRAGIAEAIRL 264 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTVDGK 339 F R ++ + LA + +G + +++ + ++ + +D Sbjct: 265 FSR---ALELDPTLVRAWTALAYAYSIEGANGFGDDAQVSIENWRTAVENAILLDPMDSV 321 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH-NEKIEEARICIDKS 398 +G + G G + + + +A + ++ A A EA I+++ Sbjct: 322 ACNCLGDLRGCLGDLEGAERAYRRAFEYGSNHADTLAMLAGSKALVAGDPAEAMPLIERA 381 Query: 399 LQLEP 403 + L P Sbjct: 382 MHLNP 386 >UniRef50_B8ESY3 Transcriptional regulator, winged helix family n=1 Tax=Methylocella silvestris BL2 RepID=B8ESY3_METSB Length = 956 Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 58/147 (39%), Gaps = 6/147 (4%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + +L++ V I + L +LI L+E AG VV +++ VW IV + + Sbjct: 15 FGPYRLSASERLLSRDGAPVAISGRALDILIALIERAGEVVSVQELLDRVWPQTIVEEPN 74 Query: 71 LTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI-----AIFP 124 L I +LR + R + + R+GY +++ D ++ P Sbjct: 75 LRVHIATLRRVLGNDSQGSRYVINVPRRGYSIVTPLYRLAREGAVAIDATVISERQPSLP 134 Query: 125 FTTSLNTLDPLILNQELVQIISNKKID 151 + + VQI+S + I Sbjct: 135 TPLQSMIGRSGTVAELSVQILSKRFIS 161 >UniRef50_Q47YD8 Putative transcriptional regulator n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YD8_COLP3 Length = 712 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 1/96 (1%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F T++ +L + E + + K +LI ++ ++ KD +++ VW +V++ Sbjct: 5 EFNHITIDTQNQLLIRDGESIILAPKVYDLLIFFCKNPARIITKDELMDEVWTGTLVTEN 64 Query: 70 SLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQ 104 +++R + +R + I T+ RKGYR + Sbjct: 65 AISRTLVKVRKALGDDPKSPQFIITVPRKGYRMVTE 100 >UniRef50_B1J1E8 Two component transcriptional regulator, LuxR family n=3 Tax=Pseudomonas putida RepID=B1J1E8_PSEPW Length = 330 Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats. Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 7/104 (6%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKI 85 + V + + VL L+++ G VV KD + VW +V D +L I LR F Sbjct: 19 DGKPVPLGGRAFEVLATLIKAKGRVVGKDELFSEVWAGTVVEDNNLQVQISLLRKAF--- 75 Query: 86 GYDRCIETIYRKGYRFSGQVFK----TKINEDNTSDYSIAIFPF 125 G I+T+ R+GYR + V T + D + A+ P Sbjct: 76 GAPGLIQTVPRRGYRLAVDVVLDLPCTALGRSPLKDAAEALVPL 119 >UniRef50_A8I3P3 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I3P3_AZOC5 Length = 592 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 52/300 (17%), Positives = 105/300 (35%), Gaps = 16/300 (5%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPMAAT-NFCNDHISQ 170 + ++ I P T +I EL I + +K +G + N Sbjct: 132 PGTGAAVLILPLTPLSGGAQDVIFADELTDELIFALEKAEGYRVASRQIAFRYRNTGAPI 191 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL------PVDELHNTSQ 224 + D + G + + AV + +EL D F + S+ P D L + Sbjct: 192 AAVAQELSADGVIHGTVRRAGAVLRVTVELADPSG-FAVWSDRFDGHVETPEDGLI-LQE 249 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRL 284 I IL + ++R + S ++ ++ L TP+++ +A+ +F ++ Sbjct: 250 RIAATILSRLRFDSSAMRSGAAGPRPQAIKASAQVYRARQLLDQQTPQALRQALGLFRQV 309 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI-LAI 343 + + Y +A+CH+ L G + A+++A + I + A Sbjct: 310 SDTTS---DYARGYSGIADCHLDLFRLGLIDHATASREAAAAVRKALSIDGKSVEAHTAR 366 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + L V+ F+ A + + Y A F +A ++ +EP Sbjct: 367 ATVAAWLDWDRAVAEEAFKTAMALGENARCVRLYGAFRAF-CGHHGDAIRLFARARAMEP 425 >UniRef50_Q987X1 Transcriptional regulator n=1 Tax=Mesorhizobium loti RepID=Q987X1_RHILO Length = 903 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 13/178 (7%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + + F E L + + + + + +L +L+ AG VV + +I VW + Sbjct: 2 DGQIFRFGPFEMHREQRRLYRDGKLLQLGSRAFDILQILVMRAGEVVRHEELIAMVWPDT 61 Query: 65 IVSDESLTRCIYSLRCIFEKIGY--DRCIETIYRKGYRFSGQVFKTKINED--------- 113 V++ +L + +LR G + I + +GY F+ V + Sbjct: 62 FVAENNLRVNMTALRRALGPEGSLTNGLIANVPGRGYSFTAPVAHQTVEHAPDRHDNSEG 121 Query: 114 --NTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHIS 169 A+F T+L TL + ++ LV I I A+ + N + Sbjct: 122 LRTLPRPLGAVFGRDTALATLAGQVPSRRLVTITGAGGIGKTTLVLAASHHLRNAYPD 179 >UniRef50_A4CCM5 N-terminal winged-HTH domain fused to TolB-like domain n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CCM5_9GAMM Length = 666 Score = 101 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 3/141 (2%) Query: 21 GILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC 80 G L Q E + K L VL VL ++ G +V + ++++VW N +V+ +L RCI LR Sbjct: 14 GELNQHGETQQLEPKVLAVLTVLYQANGMLVSQQTLLDTVWPNTVVAPNALQRCITQLRK 73 Query: 81 IFEKIGYDRCIETIYRKGYRFSGQVFKTKI-NEDNTSDY-SIAIFPFTTSLNTLDPLILN 138 I+T ++GYR ++ + SIA+ + + Sbjct: 74 HLADDDKT-LIQTFAKRGYRLQVPTTTPRLKTTRSLPKPRSIAMIAVALLIILSLIWLQF 132 Query: 139 QELVQIISNKKIDGLYTYPMA 159 Q++S KI L P A Sbjct: 133 SSPQQLLSVSKISPLTYQPSA 153 >UniRef50_Q12K29 Transcriptional regulatory protein-like protein n=2 Tax=Alteromonadales RepID=Q12K29_SHEDO Length = 604 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 +Y F E +E +LT+ + I E VL +LLE A V+ KD I+ VW+N V Sbjct: 1 MNYRFNEFEFDSESLLLTKSGLTLAIRHNEAKVLALLLERADKVLSKDDILSHVWQNRPV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS-IAIFPF 125 S++++ + I LR I ++ I+T ++GY++ + + + +++ P Sbjct: 61 SEQAVFQNISHLRSILG----NQAIKTFPKRGYQWQLETVRVTPDSQSSTIPVRTQYQPL 116 Query: 126 TTSLNTLDPLILNQELVQII 145 + P L L ++ Sbjct: 117 PVPSHNKRPRWLYFALASML 136 >UniRef50_B4CVJ4 Transcriptional regulator, CadC n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVJ4_9BACT Length = 598 Score = 101 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 28/113 (24%), Positives = 48/113 (42%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F L GN + + + +L+ L+++ VV KD +++++W ++ V Sbjct: 1 MVHRFPSFEIDEPARELRTGNRVLPLQPRVFDLLVYLVKNRDRVVSKDELLDTLWADVTV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 +D SL R I R + I T RKGYRF + E T + Sbjct: 61 ADGSLQRAISLARTALAEADAADMIRTYARKGYRFCDEHADCGEAETETEHPA 113 >UniRef50_Q48IP6 Transcriptional regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48IP6_PSE14 Length = 936 Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 47/103 (45%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L+ + + F + + +L + ++ V + + + +L+ G ++ K ++ W Sbjct: 10 LQGQEAIRFGSFVLHPQQQLLFRHSQPVPLGSRAMSLLVAFATRPGELLEKAELLTLAWP 69 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQV 105 +V + +L I +LR E+ I T+ +GYRFS V Sbjct: 70 KAVVEECNLRAQIVTLRRALEEQDDFTYIVTVPGRGYRFSAPV 112 >UniRef50_Q12RS3 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RS3_SHEDO Length = 678 Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 1/107 (0%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F T +T+ + + I K +L+ L ++ + +D +I +VW+N V Sbjct: 1 MIFVFDNIEINTALVTITRNRQALEIEPKLFSLLVYLCQNPNRAISRDELINTVWENRFV 60 Query: 67 SDESLTRCIYSLRC-IFEKIGYDRCIETIYRKGYRFSGQVFKTKINE 112 S+ ++ R I LR I + + + I T+ + GYR V + Sbjct: 61 SEAAINRAIGQLRKHIEDDTSHPKYIRTVSKVGYRLDAVVQHIPQAQ 107 >UniRef50_B2TAW9 Transcriptional regulator, winged helix family n=7 Tax=Burkholderia RepID=B2TAW9_BURPP Length = 1014 Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 6/126 (4%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 LEN E + + E +++ + +L V++ +AG +V KD ++ +VW Sbjct: 33 LENDMI-ELGRFQIDLEMRTVRRDGEALHLGSRAFDILAVIVSAAGRLVTKDELMNAVWP 91 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 N +V + ++ + +LR I I T+ +GY+ V + + + A Sbjct: 92 NTVVEENNIQVHLSALRKILG--ADRHLILTVPGRGYQL---VHRQQPAPVRPASRVCAG 146 Query: 123 FPFTTS 128 P + Sbjct: 147 RPLPSP 152 >UniRef50_C3NSU2 Transcriptional activator of cad operon n=39 Tax=Vibrio RepID=C3NSU2_VIBCJ Length = 519 Score = 101 bits (250), Expect = 9e-20, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 2/109 (1%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + + + ++ L + + +V + + +L L E AG V ++ +I+ VW I Sbjct: 3 GICFQINDWVLCIDENKLYRQDREVSAEPRLINLLHFLAEHAGEVFGREELIQHVWDGAI 62 Query: 66 VSDESLTRCIYSLRCIFEKIGYD--RCIETIYRKGYRFSGQVFKTKINE 112 V+D+ +T+ I+ LR + + + T+ ++GY+ V + N Sbjct: 63 VTDQVVTQSIFELRKLLRDGREENLSYVVTVPKRGYKLVANVQRLDGNP 111 >UniRef50_A5ED47 Transcriptional regulator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ED47_BRASB Length = 972 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 39/247 (15%), Positives = 79/247 (31%), Gaps = 8/247 (3%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L K + E + L V + + ++ VL++S G +V KD ++ VW Sbjct: 25 LGGKVVFATGEWEIDLDRRELRARGGPVPLGGRAFEIMEVLIKSEGKLVTKDELLSQVWP 84 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 V + +L I +LR ++TI +GYR G T + + + Sbjct: 85 GATVEENTLQVHISALRKALGPD--REMLKTISGRGYRLLG----TWAPRASGAVLRTSP 138 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 F L + ++I G + + + ++ + + + Sbjct: 139 VHFHAVSGATFQTNLPEATSELIGRDA-AGQH-LRNLLSTYRVVTLTGPGGIGKTRLALE 196 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVR 242 V + + + +EL + L+ S L I Q + + Sbjct: 197 VARSLVPDFHGDRFLVELASLSDPALLPSAVAGAMGLRLGEDAASHTIAQITGGKKLLLV 256 Query: 243 LAKQDQG 249 L + Sbjct: 257 LDNCEHV 263 >UniRef50_C7R8I4 Transcriptional regulator, CadC n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7R8I4_KANKD Length = 217 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 2/96 (2%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 + ++ L+ + + K + VL+ L E AG +V KD + E VW + +S Sbjct: 8 GFQLVDWQVDPALNQLSIDEKIFELEPKVMQVLVCLNEHAGELVTKDTLFEEVWHGVSIS 67 Query: 68 DESLTRCIYSLRCIFEKIGYDRC--IETIYRKGYRF 101 D+++ I LR F ++ R ++TI R+GY Sbjct: 68 DDAIYCSISKLRKTFRQVAEHRSPELKTIARQGYML 103 >UniRef50_Q7NLM6 Serine/threonine protein kinase n=1 Tax=Gloeobacter violaceus RepID=Q7NLM6_GLOVI Length = 913 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 42/315 (13%), Positives = 100/315 (31%), Gaps = 20/315 (6%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCNDHISQN 171 S ++ + PF+ +T D L L ++ K+ L A D S Sbjct: 394 AASGKTVVVLPFSERGSTGD-ERLADGLTLSLTTHLGKVAALTVISDRAAMQYRDS-SLA 451 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDN 229 +TG + ++ + L+D ++ + + + ++ + Sbjct: 452 QIGGDLGATGVLTGSVLRSGERVRIAARLVDPRSGTQLWAEQYDRKLQDIFAIQTEVAQR 511 Query: 230 ILQTV---HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I + PE +RLA+ Y L G++ FT + A+ F + Sbjct: 512 IAAAMKAKLTPEEKIRLARAPAQNAMAYQ--YYLRGREYNNRFTVKDNEYAIGFFKQ--- 566 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL-AIMG 345 + LA +++ ++G A A + + + A+ Sbjct: 567 ALALDPDFALARSGLAVGYLNRFIYGGKVSWREA--ACREAGRAVALESGLAEAHNAMAA 624 Query: 346 LITGLS-GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 + + + + +A + + S Y + + +++E + K++++ P Sbjct: 625 CYSQMELRLQPQAMAEYRRAIDLNPNFFSAMYNYSAILASLGRLDEGLYWMKKAVRVNP- 683 Query: 405 RRKAVVIKECVDMYV 419 + Y Sbjct: 684 -LCIGCYRSIASYYW 697 >UniRef50_D0I6A9 Putative transcriptional activator ToxR n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I6A9_VIBHO Length = 185 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L N+ + L+ LT D I++ G +E +L +L E+A V+ K+ I + VW Sbjct: 7 LGNQVIFDTLKREVLTTDKIISLGG-------REAAILKLLCENANMVITKEEINDKVWG 59 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYRFSGQ 104 + VS+ SLT+ I +LR + I C I+TI ++GY + Sbjct: 60 KVFVSETSLTKAISNLRKSLQLIDGVMCEIKTIPKEGYMLILE 102 >UniRef50_Q01Y07 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Y07_SOLUE Length = 821 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 101/312 (32%), Gaps = 27/312 (8%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLD----PLILNQELVQIISNKKIDGLYTYPMAATNFCND 166 ED SIA+ PF + D L L+ +S ++ + P + Sbjct: 349 EEDAAPLTSIAVLPFFFLSDVQDRKAYSLGFADALITTLS--SVEEIAVLPTSTIANHVP 406 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQ 224 I + Y + G + + + + +L D++ + + + + Sbjct: 407 GIDLSRTCEDLGVRYLLQGSVQRQGSQWRVSTQLYDSRKQKIAYAERHDFVRESVFEVQD 466 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-----EMLAGKKELYDFTPESIYRAMT 279 I +L+++ +RL + ++ Y SD + G +E Y E++ A Sbjct: 467 EIGRRVLESLQ-----MRLKQAAPKSRDRYSSDPEAFEAFMTGLRESYSDRQETLLSAAD 521 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDG 338 + + + L+ ++++ +H + + +LA A + Sbjct: 522 HLSQ---AVERDPDFALAHATLS--YVAMHIHFEFDPKLAWLDPAEHHCGRALALDPALP 576 Query: 339 KILAIMGLITGLSG---QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + I Q + E+ + + A + H + EEA Sbjct: 577 EGHLARSFILWSPARNFQHAEAIQALEKVLAAQPNNERAHNRIANICVHIGRFEEAYAAQ 636 Query: 396 DKSLQLEPRRRK 407 ++ + P+ R Sbjct: 637 RRARRSNPKTRS 648 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 4/113 (3%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + L+ G+++V + + + +L++ ++ G V+ K+ I+ ++W+ +V+D Sbjct: 21 FAIDSWRLCVHSNSLSSGDQRVELEHRLVALLLMFIDHPGEVLEKERILATIWQGKVVND 80 Query: 69 ESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFS---GQVFKTKINEDNTSD 117 +SL I LR R I+TI GY+F V + + Sbjct: 81 DSLAVAISHLRKALGDNPRSPRYIKTIPGVGYQFIASAAPVEEAPATPAPVPE 133 >UniRef50_Q022M7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022M7_SOLUE Length = 579 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 51/355 (14%), Positives = 120/355 (33%), Gaps = 36/355 (10%) Query: 67 SDESLTRCIYSLRCIF-----EKIGYDRCIETIYRKGYRFSGQVFKT--------KINED 113 +D + LR E+ D + + + GY +F+ + Sbjct: 76 NDPIVRVQARRLRAQLARYYREEGQEDELVIEMPKGGY---APIFRPLKSAPAKRPTSPA 132 Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSF 173 S ++A+ PF D + L Q I + G+ + A+N + + Sbjct: 133 LVSRNTVAVLPFADHSPGGDQRYFCEGLCQEI-IHVLAGMDAIRLVASNHAAESAAM--- 188 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 +TG I + + ++DA + S + ++ + + + + Sbjct: 189 --------VITGSIRLAGSEVRITTNIVDAAADCYLWSGSIDRKLENIFVLQEEVARAVA 240 Query: 232 QTVHKPERSVRLAK-QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + + + A+ + +N + L G+ L T E + +A+ FD+ Sbjct: 241 EQLKLQLAGGQTARGSGRPTENLTAYNLYLQGRYHLNQRTEEGLRKAVEFFDK---AIVE 297 Query: 291 QTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 Y LA+ + L +G + ++ + A V ++ + + Sbjct: 298 DAQYAHAYSGLADAYSLLGHYGVLAPADVWTRTASNAAWAVLQDEHSAEAHTSLAHVKST 357 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVH-FHNEKIEEARICIDKSLQLEP 403 + F++A + +++ A+ ++EEAR + + +L+P Sbjct: 358 QDWDWLGAEREFQRALSLDPRYPTAHHWYAVSCLAPMGRLEEAREEMSLAQELDP 412 >UniRef50_D1TNN3 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TNN3_9BURK Length = 489 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 5/107 (4%) Query: 10 HFLEGLTLTEDG-ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + + + ++ DG + + + I + +L +L+ SAG +V KD I+ VW V + Sbjct: 2 YVFDRVAVSLDGRQVFRDGQAQPIGARAFDILELLIRSAGKLVTKDEIMRLVWPTTFVVE 61 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT 115 ++ I +LR +F I T+ +GY+ T + + Sbjct: 62 NNIQVHISALRKLFGDG----WIRTVPGRGYQLRTPSQMTAPHAPSQ 104 >UniRef50_B1KFP5 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KFP5_SHEWM Length = 725 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 1/110 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + Y + + + + + + + VL+ L+ AG V +DM+++ VW Sbjct: 3 KRTRYRLADKVVDPAQCTILSDGNLLKVELRAMQVLLCLINHAGEPVSRDMLLDEVWSGG 62 Query: 65 IVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINED 113 VSD ++ R I LR I+T+ + GY + K Sbjct: 63 EVSDNAINRIIGILRNQLGDNAKSPEFIKTLPKVGYVLIAPITLVKEVTK 112 >UniRef50_A9DZ64 Serine/threonine protein kinase n=1 Tax=Kordia algicida OT-1 RepID=A9DZ64_9FLAO Length = 583 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 89/285 (31%), Gaps = 13/285 (4%) Query: 128 SLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVT 184 N +D + + + I + I L ++ F H+ + Sbjct: 1 MSNDIDNEYFSDGITEEIINALSNIKALKVIARTSSFVFKGKHVDVRKVGKELNVSTILE 60 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLA 244 G + + + +LID + S + + L + + + L K + Sbjct: 61 GSVRKAENRVRISAQLIDTTDGTHYWSKNFDRE-LDDIFKLQDEISLLIADKIRENFGHF 119 Query: 245 KQDQGYKNHYLSD-----EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 D H+ E L KK + F + ++I +N + + Sbjct: 120 NVDDSLVTHHNISTAAYHEYLKAKKLISRFNKDDALEGISIL---KNVIEQYPTFALAHV 176 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL-ITGLSGQAKVSH 358 + + LA G ++ A + L+ ++ ++ +G K + Sbjct: 177 HIHYAYNILAAAGLMPVKKAFEIGGHYLETAHNLKVDLPEVHHSLGWDALNKKWDFKSAA 236 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 ++A + + + ++EA I I+K+ L+P Sbjct: 237 CHLKKALELKPGYSDAHQKLFITLILEGNLDEANIHINKAYTLDP 281 >UniRef50_C9Q7M5 Transcriptional regulator CadC n=2 Tax=Vibrio RepID=C9Q7M5_9VIBR Length = 474 Score = 99.9 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 62/403 (15%), Positives = 133/403 (33%), Gaps = 58/403 (14%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 + H + + L + ++ + VL++L ESA K+ ++E+VW+ Sbjct: 12 QRNPISHLADWYVEHQSRTLRNAHTTLHFDTTQFAVLMLLAESAPEAASKEALLENVWRG 71 Query: 64 IIVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 +V+++S+ I LR +F + I T GYR+ +V + + + + Sbjct: 72 KVVTEDSIYVVINGLRRVFSDNARQPKYIATENGVGYRWIAEVRRERSQQ---------V 122 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRF-KPDY 181 + + + +S+ + GL+ + L F + +Y Sbjct: 123 KRWRLAAG-----------ISGLSSLALIGLFWLSRPVV-----SPLPATALEHFQRANY 166 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSV 241 +T ++ +Y LID F + + ++ I + + Sbjct: 167 LMTQPAQYHDEAIEIYQSLIDQYPSF--------AESYVKLAAAMMSTIFNSDVRVVEKK 218 Query: 242 RLAKQDQGYKNHYLSD--EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 R +Q + E LY +A F++ Q Sbjct: 219 RWIEQQLLHALELDPTHREAHKLLGNLYFLVFHQHDKARKHFEQAQ-------------- 264 Query: 300 LLAECH--MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 LA+ H S L E E A ++ + + +G I ++G + Sbjct: 265 GLADAHYFYSQFLLAMGEFEAAHRELERYIALHPQGYSSEG-----AAWIYTMAGNYSRA 319 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + E+ K STD + + + + A + + ++ Sbjct: 320 RLELEKLKEFSTDSYYYLVSQQAIAELSGDDKTAFAFLMQLIE 362 Score = 44.0 bits (102), Expect = 0.012, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 24/187 (12%) Query: 238 ERSVRLAKQDQGYKNHYLSDEMLAGKKELYD--------FTPESIYRAMTIFDRL----- 284 ERS ++ + LS L G L E RA + + Sbjct: 117 ERSQQVKRWRLAAGISGLSSLALIGLFWLSRPVVSPLPATALEHFQRANYLMTQPAQYHD 176 Query: 285 ------QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q+ D E Y LA MS + + + + L + ++ Sbjct: 177 EAIEIYQSLIDQYPSFAESYVKLAAAMMSTIFNSDVRVVEKKRWIEQQLLHALELDPTHR 236 Query: 339 KILAIMG-LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 + ++G L + Q + FEQA+ A +Y+ + + E A +++ Sbjct: 237 EAHKLLGNLYFLVFHQHDKARKHFEQAQGL----ADAHYFYSQFLLAMGEFEAAHRELER 292 Query: 398 SLQLEPR 404 + L P+ Sbjct: 293 YIALHPQ 299 >UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJQ2_9RHOB Length = 416 Score = 99.5 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 60/418 (14%), Positives = 126/418 (30%), Gaps = 62/418 (14%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + +T V + + + +L+ L ++ G V KD I ++W + V+D Sbjct: 7 FLMGPVRVEPAMNRITSEEGPVELEPQVMDLLVYLAQAKGEVRSKDDIARALWPDASVND 66 Query: 69 ESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKT----KINEDNTSDYSIAIF 123 ++L+R I+ LR R ++T+ R+GYR V + + S + Sbjct: 67 DALSRTIWKLRQALGDDAKSPRFVQTVSRRGYRLIMPVATLGAGMEAQTETGPRMSATVL 126 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 +++ + + + I+ + + Sbjct: 127 ---------------------LASAAVLVVLLVGASVILRQPADIAPPMAAQTDEAGALL 165 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRL 243 N + Y + A N + L L Q Q +R +R Sbjct: 166 -------NRADGFYAQYTRADNEAAL---RLYERILAGDPQNAAALAGQANALTQRVIRW 215 Query: 244 AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 + Q + L++ + +G+ E TP S Q + + + Sbjct: 216 GLEGQANRTT-LTEALQSGELE----TPRSQAALERAEALAQEATRLDPGHARAW----- 265 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQ 363 AL + A D I + + + + LSG + L + Sbjct: 266 ----RALGLIKAAQSDFDAARRAYDRALVIDPENWGAMINLSELEDLSGHPERQADLLAR 321 Query: 364 A------------KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV 409 + + + A + + ++A + + L L+P +AV Sbjct: 322 SFEVMSRDYAANPVAIRPWQSEVGLAVARLRAEAGEPQQAELWYRRVLALDPLNVEAV 379 >UniRef50_A5KUS7 DNA-binding transcriptional activator n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KUS7_9GAMM Length = 615 Score = 99.5 bits (246), Expect = 3e-19, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 2/120 (1%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 + + Y F L + ++ L NE V I + +L ++ V +D +I VW Sbjct: 3 KERIQYSFDVWLFIPDEDKLIMDNEDVIIDNRLSKLLDFFCQNPNIVFSRDELINEVWNG 62 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 I++D+ +T+ I+ LR + I T+ ++GY+F +V KT + +++ Sbjct: 63 SILTDQVITQAIFELRKTLKSAERHSMGYIITVPKRGYKFDVEVKKTVLVPPPIVTNTVS 122 >UniRef50_Q3KE15 Putative transcriptional regulator n=3 Tax=Proteobacteria RepID=Q3KE15_PSEPF Length = 959 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 6/127 (4%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + F + +LT+ V I + L +LI LLE G V+ K +I+ VW + +V++ Sbjct: 16 FIFGPFCVVPGKRLLTRNGVAVEIGGRALDLLIALLEQPGRVLSKYDLIDKVWPDSVVAE 75 Query: 69 ESLTRCIYSLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTK-----INEDNTSDYSIAI 122 SL + LR I R I T GY F + + + + + Sbjct: 76 GSLRFHMTGLRRILGDGEEQARYIATQVGVGYAFVAPLERKQTAVHPAPIATRATEGVCS 135 Query: 123 FPFTTSL 129 P L Sbjct: 136 LPPRARL 142 >UniRef50_C6XRJ0 Transcriptional regulator, CadC n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XRJ0_HIRBI Length = 398 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 1/108 (0%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +N + F E + + G +T + + + K L +L+E G + K+ ++E++W + Sbjct: 6 QNTRVFKFGEFVLDRDLGTITFEGDDLKLRPKAYEFLSLLVEGRGRLFSKEELLETLWPH 65 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKIN 111 + ++ESL R + + RC I TI ++GYR VF K + Sbjct: 66 VFATEESLARVVSTCRCALGDE-EKTIIVTIPKRGYRIGLPVFTDKDD 112 >UniRef50_A6XSQ7 ToxR2 n=9 Tax=Vibrio RepID=A6XSQ7_VIBCH Length = 183 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/103 (32%), Positives = 54/103 (52%), Gaps = 8/103 (7%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L N+ + L+ LT D I++ G +E +L +L E+A V+ K+ I + VW Sbjct: 7 LGNQVIFDTLKREVLTTDKIISLGG-------REASILKLLCENANTVITKEEINDKVWG 59 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRC-IETIYRKGYRFSGQ 104 + VS+ SLT+ I +LR + I C I+TI ++GY + Sbjct: 60 KVFVSETSLTKAISNLRKSLQLIDGVMCEIKTIPKEGYMLILE 102 >UniRef50_Q1IHU2 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IHU2_ACIBL Length = 323 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 12/136 (8%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVS-DESLTRCIYS 77 G L + ++ + ++ VL +LL+ AG VV ++ I + +W + V D SL I Sbjct: 61 SGELRKNGAKLKLQEQPFQVLALLLDRAGQVVTREEIQQKLWPADTFVDFDHSLNTAINK 120 Query: 78 LRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINE-DNTSDYSIAIFPFTTSLNTLDPL 135 LR + R IET+ R+GYRF V + + + + S + + DP Sbjct: 121 LRDVLGDTASNPRFIETLPRRGYRFIAPVEWNEPSVIPSGAAPS--------ATESKDPS 172 Query: 136 ILNQELVQIISNKKID 151 + + I+ ++ Sbjct: 173 RQTEPSIATIAEPELP 188 >UniRef50_A6CY17 DNA-binding transcriptional activator n=2 Tax=Vibrio shilonii AK1 RepID=A6CY17_9VIBR Length = 529 Score = 99.1 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 58/398 (14%), Positives = 129/398 (32%), Gaps = 53/398 (13%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 K + + + + E + I + + L E+ V +D +I VW I Sbjct: 5 KVQFKIDDWVFYPYEDKFVLHGEDIVIDNRLSKLFHFLCENPDTVFSRDELINEVWNGSI 64 Query: 66 VSDESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYS---- 119 ++D+ +T+ I+ LR I ++ G I T+ ++GY+ V K + + Sbjct: 65 LTDQVITQAIFELRKILKQHGNHPYGYIVTVPKRGYKLDATVEKVIETPQPVIETTDSVS 124 Query: 120 --IAIFPFTTSLNTLDPLILNQELVQIISNK-----KIDGLYTYPMAATNFCND---HIS 169 I + ++ T D ++ + + T F + Sbjct: 125 EKIDVLRDESAPETTDIVLPEAGASTEVEASAAEPVRQRPAMQTATKKTGFRKRWIATAA 184 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFII 227 Y + QN+ IE I + + H+ +++ + Sbjct: 185 LLVIGIGVGASYL---HVKQNDRAAAKVIEPIATPSYLSLEPRYIHVILEDGVLRDDLKV 241 Query: 228 DNILQTVH------------------KPERSVRLAKQDQGYKNHYLSDEMLA--GKKEL- 266 + + ++ A + +++ + + G K L Sbjct: 242 GFTKKLLELLKTYKDYRVIYDGPASKVAANELKFAASKRDNQDYIEIEYVNRISGHKHLD 301 Query: 267 --YDFTPESIYRAM-TIFDRLQNKSDIQTLKTECYCL-------LAECHMSLALHGKSEL 316 Y T + + ++ D L + +I+ K+ L A +L G S Sbjct: 302 RKYRVTEDMLKPSLKKSLDDLLDSFNIEIEKSLIADLVDELPNEAASIESALTSIGASYH 361 Query: 317 ELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 + +A+EL++ ++ + ++A G I +S Sbjct: 362 DYTHTRAIELIEEAKKLSPDNPYVVA-TGYIFNVSRMY 398 >UniRef50_Q3KEV6 Putative transcriptional regulator n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KEV6_PSEPF Length = 490 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Query: 2 DLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 +L + F ++ +G+ Q+ + + L +L VL+E AG VV K+ +I VW Sbjct: 6 ELNSASVLRFGPYAFHLRQRLILEGDRQLRMGGRALDILQVLVERAGQVVSKEQLIALVW 65 Query: 62 KNIIVSDESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINE 112 +V + +L I +LR + R I + ++GY F V + + Sbjct: 66 PTSVVEEINLRVHIAALRRALGEGENGQRYIVNVPQRGYSFVAPVQGDSVTQ 117 >UniRef50_C6AYW7 Transcriptional regulator, winged helix family n=6 Tax=Rhizobiales RepID=C6AYW7_RHILS Length = 946 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 3/120 (2%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F +L + + + + L +L+ L + +V K +I VW ++IV + Sbjct: 13 SFGPFRLSVGQRLLAKDGVPINLGARALDLLVALTLAPNVIVSKQDLISRVWPDVIVDEG 72 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTS--DYSIAIFPFT 126 SL + LR R I TI +GY F + ++ + ++ D+ AI P Sbjct: 73 SLRFHMTGLRKALGDGHDGARYITTIAGRGYCFVAPISRSGLLRQVSAELDFRYAILPGR 132 >UniRef50_Q087B1 Lysine decarboxylase transcriptional regulator, CadC n=9 Tax=Shewanella RepID=Q087B1_SHEFN Length = 1102 Score = 98.7 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 1/103 (0%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N ++ F + + + G+ + K + VL +L + G V+ D II W +I Sbjct: 2 NDSTFFFGDWQINPQSNSVQSGDVIRSLEPKAMDVLRLLCQHQGEVLAADDIINHCWNSI 61 Query: 65 IVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVF 106 + D L + I LR + IETI ++GYR V Sbjct: 62 AIGDNPLHKVITQLRKALGDQASNPQYIETIRKRGYRTIASVE 104 >UniRef50_A3UTR1 Transcriptional regulator CadC n=1 Tax=Vibrio splendidus 12B01 RepID=A3UTR1_VIBSP Length = 652 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 2/121 (1%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 + + Y F L + ++ L +E V I + +L ++ V +D +I VW Sbjct: 3 KERIQYSFDVWLFIPDEDKLIMNDEDVIIDNRLSKLLNFFCQNPKIVFSRDELINEVWNG 62 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRC--IETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 I++D+ +T+ I+ LR I + I T+ ++GY+ V KT + + + +++ Sbjct: 63 SILTDQVITQAIFELRKILKAAERHSMGHIITVPKRGYKLDVDVHKTILVPASITTNTVS 122 Query: 122 I 122 + Sbjct: 123 V 123 >UniRef50_A3W8K2 Putative uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W8K2_9RHOB Length = 393 Score = 98.3 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 65/371 (17%), Positives = 122/371 (32%), Gaps = 63/371 (16%) Query: 24 TQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE 83 ++G+E+ ++ K +L VLL+ G +V KD ++ VW N+ VSD+SL +C+ +R Sbjct: 4 SRGDER-FLRPKSYRLLEVLLDRRGKLVSKDDLVREVWPNVFVSDDSLAQCVSDVRRALG 62 Query: 84 KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ 143 G + T+ R+GY ++ED D PL + Q Sbjct: 63 AEGAG-LLRTVPRRGYVL--------LDEDAIPDC---------------PLKMRGRPWQ 98 Query: 144 IISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDA 203 ++ ++ + +T + + D + L+DA Sbjct: 99 FLAGGRVAAILVV---STGLWSLAPKPVEVTTALTEDVSIPAEGRAE--------ALLDA 147 Query: 204 KNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGK 263 ++ DE +L+ V + ++ L + Sbjct: 148 RD----WRKRENNDE--------ARVLLEAVLRENPG-NADAWANLGLTYW-----LEVR 189 Query: 264 KELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKA 323 + + +A+ I R + LLAE + L + A Sbjct: 190 HVAWGGGRREMKQAVDIVGRAIAIG----GSARSHRLLAE----MRLLAPFPEMRSPVDA 241 Query: 324 LELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYY-YRALVH 382 L + D LA++ + L+G+AK + EQA+ Y L + Sbjct: 242 LANARAAVALDPKDADNLAVLARVLVLTGRAKEAVHTIEQARQGDLTEPDWYREIAGLSY 301 Query: 383 FHNEKIEEARI 393 + A Sbjct: 302 LLVGEPSRAVE 312 >UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, CadC n=2 Tax=Rhizobiales RepID=Q1QIX2_NITHX Length = 574 Score = 97.9 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 58/421 (13%), Positives = 124/421 (29%), Gaps = 49/421 (11%) Query: 11 FLEGLTLTEDGILTQ-GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F L G E + + K L +LI+ + G V+ K ++++VW N+ V D+ Sbjct: 5 FAGFQLDRPRAELRGPGGEALKLRPKTLCLLILFATNPGRVLSKRELMDAVWPNVHVGDD 64 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 SL +CI +R + + + GY F +V + D + F T + Sbjct: 65 SLFQCIREIRTALGDE-RRQLVRLVSGHGYVFEAEVSVQAASSDTPVPSPVPPFSVTDAP 123 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 D ++ ++ GL + + + + Sbjct: 124 GEPDTPGKPDVTIEPTRLSRLSGLRRPAAMIAA--LSVVVGLAVATAIQ----------- 170 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 ++ E + E + + + + K E ++R+ Sbjct: 171 ---RAPIFEE--RGPPTIAVMPIKAAGGEAAAMAANVTVRLADGLAKIE-NIRVVALQSA 224 Query: 250 YKNH--YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS 307 +D +L+G EL E + A R ++ + T AE + Sbjct: 225 LPAAGTPQADFVLSG--ELQQG--EGTWDAQVRMTRTADREVVWTAPATITVGDAELSLQ 280 Query: 308 LALHGKS-------ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV---S 357 + S + A + + + ++ + L + Sbjct: 281 QSRLAASIGHPLAVRISTLLDAAAKPTESGRGASPGSANVVIEQATASILRTTRDRFATA 340 Query: 358 HILFEQAKIHSTDIAS------LYYYRALVHFHNEKI------EEARICIDKSLQLEPRR 405 + E+A + R + AR ++++LQ++P Sbjct: 341 QTMLEKALAGDPENVDLAVSLAALQLRGIQMVWYSPADSAAAETRARAILERALQVKPSS 400 Query: 406 R 406 Sbjct: 401 I 401 >UniRef50_Q2C4S0 Putative uncharacterized protein n=1 Tax=Photobacterium sp. SKA34 RepID=Q2C4S0_9GAMM Length = 262 Score = 97.9 bits (242), Expect = 7e-19, Method: Composition-based stats. Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 +Y + +L+ G +Q + E +L +LL A +VLK+ + E W++ +V+ Sbjct: 4 NYKIKNVTFCSNRAVLSNGEKQQVLNFTEAKLLEILLSKANEIVLKETLKEFAWQHTVVT 63 Query: 68 DESLTRCIYSLRCIFEKIGYD-RCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 D SLT+ I LR D I TI R GY+F + N D + + S+ Sbjct: 64 DSSLTKSIAKLRRALAFFFEDEELIITIPRVGYKFVSHDVEPVANVDTSIEESL 117 >UniRef50_Q1YZ13 Transcriptional activator CadC n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YZ13_PHOPR Length = 509 Score = 97.9 bits (242), Expect = 8e-19, Method: Composition-based stats. Identities = 62/390 (15%), Positives = 130/390 (33%), Gaps = 53/390 (13%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y + + + V I + +L+ L + +D +I VW ++ Sbjct: 5 RYKIDNWIFIPSENKCILDERSVVIDNRLSNLLLFLCQHPHQTFSRDELINEVWNGSFLT 64 Query: 68 DESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 D+ +T+ I+ LR I + I TI ++GY+ +V +I +D+ S Sbjct: 65 DQVITQSIFELRKILKSNQRHPHGYIITIPKRGYKLDAEV---EIQDDSLSTED------ 115 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTG 185 N D + L +NK+ P +A ++ + + + S Sbjct: 116 ----NNQDTENAHALLNTAHTNKEAVREVPQPSSAPSYQKEREAAHQRRSS--------- 162 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQF--IIDNILQTVHKPERS--- 240 + L+ A L P +T +F + +++ K + + Sbjct: 163 ----RGKLIAFCCLLLVATLASLFYYVKTPESRATSTRKFSSLEPSVINVSIKIDSNTTD 218 Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 + + + G N L+D L T S ++ L ++ + + E Y Sbjct: 219 PKTTRIEIGAINSLLNDLQYNKNFRLVRNTTPSPVAGKSLTFHLLEENGKKYIDVEYYNN 278 Query: 301 LA-ECHMSL-ALHGKSELELAAQKALELLDYVSDIT-------------TVDGKILAIMG 345 ++ H+ L +++L L ++ L L + I + + L + Sbjct: 279 ISNFMHLDRKYLINENDLLLTIKQMLTNLLHALHINVPQQTIDSALSEMPTNPQALELTM 338 Query: 346 LITGL-----SGQAKVSHILFEQAKIHSTD 370 G+ + L++QA D Sbjct: 339 QAIGIVFNNNDADKLKALTLYQQALDIEPD 368 >UniRef50_B1T3K6 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T3K6_9BURK Length = 465 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 4/147 (2%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 Y F + + L G ++V I + +L++LLE G V K+ I+E+VW+ I Sbjct: 6 DSQYEFGKTVVSAHRRELVHGGKKVEIGNRAFDLLLLLLEERGVAVSKNRIMEAVWRGRI 65 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 V + +L I SLR + + I T+ +GY+F GQ+ + + S + P+ Sbjct: 66 VGENALEAQISSLRRALSED--RKAILTVAGRGYQFVGQLREQSDPTPRPTFTSTS--PY 121 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDG 152 S P ++ + I I G Sbjct: 122 RGSRKPHIPKYTSRWFGREIDKNDIAG 148 >UniRef50_C5AMC0 Transcriptional regulator, winged helix family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AMC0_BURGB Length = 956 Score = 97.5 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 22/102 (21%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 23 LTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIF 82 L + V + + +L +L + G +V KD +++++W + V + +L + +LR Sbjct: 26 LRENGSAVRLGARAFAILEMLAAADGRLVTKDALLDAIWPDTFVEENTLQVHLSALRRAL 85 Query: 83 EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 CI T+ +GYR V + + + A P Sbjct: 86 GD--QRDCIMTVPGRGYRL---VRRAAAEPPRGAQPA-ARLP 121 >UniRef50_Q89GU0 Blr6255 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89GU0_BRAJA Length = 946 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + +L + +++ + L +LI L G VV K +++ +W ++ V + Sbjct: 11 SFGPFRLFPKSRLLEKEGSPLHVGGRALDILIFLAGRPGEVVDKRELVKRIWADVNVDEG 70 Query: 70 SLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 SL + +LR G R + + +GY F + + + I P + Sbjct: 71 SLRFHVAALRKALGDTGKSARYVVNVPGRGYSFVASLAQAAPPVAPVP---LDIVPPRSL 127 Query: 129 LNTLDPLILNQELVQIISN 147 L ++ +E+++ ISN Sbjct: 128 PVQLAKMVGREEVIEKISN 146 >UniRef50_C2HYC0 Transcriptional activator ToxR n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HYC0_VIBCH Length = 275 Score = 97.5 bits (241), Expect = 9e-19, Method: Composition-based stats. Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 3/99 (3%) Query: 20 DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLR 79 D LT GN+ ++ E +L +L++++G VV K +IE W +V++ SL + I ++R Sbjct: 22 DSTLTYGNKNHHLSYTETRILELLIKNSGSVVSKIQLIEYSWTGKVVAETSLAKSISNIR 81 Query: 80 CIFEKIG-YDRCIETIYRKGYRFS--GQVFKTKINEDNT 115 +F + +D I+TI R GYR S V++ K++E + Sbjct: 82 KVFRECEFHDDAIQTIPRLGYRLSLRSNVYEEKMDETSN 120 >UniRef50_A4CDM3 Putative transcriptional regulator n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4CDM3_9GAMM Length = 678 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 2/99 (2%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 SY F + TL + L++ ++ I + L VL+ L+E+ + + +++W+ +VS Sbjct: 4 SYRFAD-FTLLVNQTLSKSGVELTIEPQVLTVLVYLIENNDRYISTQELHDALWQGRVVS 62 Query: 68 DESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQV 105 D ++ R + LR I I+++ ++GYRF ++ Sbjct: 63 DTAIRRAVGKLRVILGDDAKEPNFIKSVSKRGYRFVAEL 101 >UniRef50_A4SQG5 Transcriptional activator CadC n=2 Tax=Aeromonas RepID=A4SQG5_AERS4 Length = 511 Score = 97.5 bits (241), Expect = 1e-18, Method: Composition-based stats. Identities = 58/375 (15%), Positives = 134/375 (35%), Gaps = 42/375 (11%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 ++ + + +D +L + + +VY+ + + +L L G V +D +I+ VW Sbjct: 2 SESVFEIHDWTLRVDDNMLCRPDREVYLEPRLVNLLRFLACHTGTVFGRDALIKEVWDGA 61 Query: 65 IVSDESLTRCIYSLRCIFEK--IGYDRCIETIYRKGYRFSGQVFKTKI--------NEDN 114 V+D+ +T+ I+ LR I + I T+ ++GY+ V ++ Sbjct: 62 EVTDQVVTQSIFELRKILKDGRFDATDYIVTVPKRGYKLVASVRPLQVVSLLMADEQPVP 121 Query: 115 TSDYSIAIF--PFTTSLNTLDPL---ILNQELVQIISN----KKIDG-----------LY 154 + +++ P T + P L + IS + + Sbjct: 122 AVNPTLSDLSPPATADDDDALPNAAPFPAGPLTRAISAHAKDARSRWKMVSFDIFVAVIL 181 Query: 155 TYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL 214 ++ ++ + ++ L + ++ NN L + A + A L Sbjct: 182 VAIVSMLSYQHASPQVHTMLDPNLLVFRFHSGMDDNNENVRLADGITRALMGEVAAVTPL 241 Query: 215 PVDELHNTSQFIIDNILQTVHKPERSVRLAK---QDQGYKNHYLSDEMLAGKKELYDFTP 271 V + ++ IL R R + D Y+N + + + + +L Sbjct: 242 RVQYG---ATNLMGGILPGKELSVRVSRQPRGTYLDLEYRNINTNRVLFSHQYQLSRHKV 298 Query: 272 ESIYRAMTI-FDRLQNKSDIQTL---KTECYCLLAECHMSLALHGKSELELAAQKALELL 327 ++ +A + R ++ D+ T+ L+A ++ + + A ++ + LL Sbjct: 299 HAVLQASSQDLLRALDQPDVLPGMGWPTDDTSLMAMMEAQYYINSQDPV--ALKRGIALL 356 Query: 328 DYVSDITTVDGKILA 342 D + +LA Sbjct: 357 DNSLFVQPDQPLLLA 371 >UniRef50_B4CW77 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B4CW77_9BACT Length = 229 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK- 62 + Y F + T L + + V + KE +L L+ +AG + +D I+ +VW Sbjct: 126 QTGTVYTFGDCRFDTTARTLVRNGQDVPLSPKEFDLLTFLVTNAGRALSRDRIMSTVWGY 185 Query: 63 NIIVSDESLTRCIYSLR-CIFEKIGYDRCIETIYRKGYRFSGQ 104 + V+ S+ R + +LR I R ++T+ GY+F Sbjct: 186 DSRVTPRSIDRFVNALRNKIEPDPAEPRILKTVREFGYKFELP 228 >UniRef50_B2JV05 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JV05_BURP8 Length = 658 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Query: 26 GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKI 85 + V I + +L +L+E+ G +V K+ I+E +W +V D +L + +LR + Sbjct: 19 DGKPVRIGNRAFDMLELLIEAQGGLVSKEAILERIWPESVVGDNNLQVHMSALRKLLGD- 77 Query: 86 GYDRCIETIYRKGYRFS---GQVFKTKINEDNTSDYSIAIFPFT 126 I+TI +GYR V + A Sbjct: 78 -SRDLIKTIPGRGYRLVRGAAIVRHADTAASYVERQTAAPHNLP 120 >UniRef50_A6GH84 Serine/threonine protein kinase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GH84_9DELT Length = 802 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 39/308 (12%), Positives = 96/308 (31%), Gaps = 18/308 (5%) Query: 108 TKINEDNTSDYSIAIFPFTT---SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFC 164 T ++A+ PF S L EL+ ++S + GL AT Sbjct: 324 TPATPTVPRGRALAVLPFRFRGPSDQAYIAEGLGDELIDVLS--TMRGLRVSGSGATARF 381 Query: 165 ND--HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELH 220 + S + D V G + + + + L+D + F + S ++++ Sbjct: 382 GEGNDRDPRSVGTELGVDVLVDGTMQLSGSRVRISARLLDVSSGFQLWSERYDGTLEDVF 441 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 + I + + + +G + L ++ + + A+ + Sbjct: 442 ALQDTMGKRIAEALRLELEDI----AHRGGAPAEAIEAYLRARRLARTWDWKGPEGAVAL 497 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA--AQKALELLDYVSDITTVDG 338 +DR ++ A ++ + + + A E++ + Sbjct: 498 YDR---CIELAPEFKPALAGRAIAYLRAWFLPSWDADEPDWEKLAAEVVAEALEGAPELA 554 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + + G+ K + + + A + Y + + + I+ + Sbjct: 555 ETHLAAAIHGVQCGEYKQAANSLATSLRIAPTYADAHAYLGRLQLEAGRARQGIAHIELA 614 Query: 399 LQLEPRRR 406 ++LEPR Sbjct: 615 IELEPRNI 622 >UniRef50_B8CR40 Transcriptional activator CadC n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CR40_SHEPW Length = 512 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 2/116 (1%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 SY + + L +++ I + +L+ L ++ + +D II+ VWK I++ Sbjct: 5 SYRIDNWFFVPHENRLVLDEQEILIDNRLSNLLLFLCDNPRTTLSRDEIIDHVWKGSILT 64 Query: 68 DESLTRCIYSLRCIFEKIGY--DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 D+ +T+ I+ LR I + I T+ ++GY+ V + + + A Sbjct: 65 DQVITQAIFELRKILKTNNQHLQGYIITVPKRGYKLDTDVEVVNEVKTAPTVLNAA 120 >UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKQ5_ACIBL Length = 945 Score = 96.8 bits (239), Expect = 2e-18, Method: Composition-based stats. Identities = 68/431 (15%), Positives = 142/431 (32%), Gaps = 50/431 (11%) Query: 19 EDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW-KNIIVS-DESLTRCIY 76 LT+G V + + VL +LLE G +V ++ I + +W + V D+ L I Sbjct: 21 NARSLTKGGASVRLQDQPFEVLGLLLERPGEIVSREEIRQRLWSSDTFVEFDDGLNTAIK 80 Query: 77 SLRCIFEKIG-YDRCIETIYRKGYRFSGQV----FKTKINEDNTSDYSIAIFPFTTSLNT 131 LR R +ET+ R+GYRF V ++ ++ + + + Sbjct: 81 KLRTALGDSALNPRFVETVPRRGYRFIAPVSVLSPVATPEPESQTEDVVIASRERSQITI 140 Query: 132 LDPL--ILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 P + + ++ + G + Y + ++ R +P V G + Sbjct: 141 TQPHHPVFWSTVALGLAISFLAGGWYYRSRS----GSDSVVSAAPIRMRPAVAVLGFHDL 196 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 +T ++ A+ L + + + E ++ A + Sbjct: 197 TGRRDTAWLSTAIAQMLCTELGAGEQLRMVSGEQVARARK--EVAWDREDTLEKASLTKL 254 Query: 250 YKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLA 309 ++ SD ++ G + D +P + + RLQ+ +TL E Sbjct: 255 -RSRLGSDYVVIGAYTVVD-SPAGPQIRLDV--RLQDARAGETLLEESDTG--------- 301 Query: 310 LHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHST 369 +SEL + L I + G +A + Sbjct: 302 --NQSELFALVSHTGQRLRDRLGIDRAN--------------GDHDAQI----RASLPKN 341 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR--KAVVIKECVDMYVPNPLKNNI 427 A+ Y + + +AR + K++ +EP A + + + + + Sbjct: 342 VEAARLYSEGVAQLRDGNAVQARDLLTKAIAIEPEHALSHAALAEAWTMLGYDSRASQEV 401 Query: 428 KLYYKETESES 438 +L + ++ S Sbjct: 402 QLAFNLSQDLS 412 >UniRef50_A6AKR5 Transcriptional regulatory protein, C n=3 Tax=Vibrio RepID=A6AKR5_VIBHA Length = 250 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 1/90 (1%) Query: 18 TEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYS 77 L+ G + + I +E +L +LLE + VV K I++ W N + + SL + I Sbjct: 6 PIKNTLSNGEKTIKIGYRESQILTLLLERSPEVVKKQDIVQFAWGNEYIGETSLAKSISV 65 Query: 78 LRCIFEKIG-YDRCIETIYRKGYRFSGQVF 106 LR F KIG D I T+ + GYR V Sbjct: 66 LRQSFIKIGIKDSPILTVPKVGYRLVEDVL 95 >UniRef50_C5D1G0 Transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus S110 RepID=C5D1G0_VARPS Length = 961 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 8/143 (5%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + +L + + + + + VL+ L+ A VV K+ ++ W +++SD Sbjct: 20 SFGPFTLRVNERLLARNGVPLDLGGRAMDVLLALIARANAVVSKEELLAEAWPGVVISDG 79 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTS-------DYSIA 121 SL I LR R + I +GY F ++ +T + + + + Sbjct: 80 SLRYQITMLRQALGDGQDGARYVSNIVGRGYCFVAKISRTFAEPEVQAQRDESPVEPGLP 139 Query: 122 IFPFTTSLNTLDPLILNQELVQI 144 P + D + +L + Sbjct: 140 APPGLLVGRSGDLAAIAAQLAKG 162 >UniRef50_Q6GZK0 Cad operon transcriptional activator (Fragment) n=9 Tax=Enterobacteriaceae RepID=Q6GZK0_ECOLX Length = 97 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 2/91 (2%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 E L +++ Q+ + + + +L+ + +G V+ +D +I++VWK IV++ Sbjct: 7 RVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNH 66 Query: 70 SLTRCIYSLRCIFEKIGYDR--CIETIYRKG 98 +T+ I LR + D I T+ ++G Sbjct: 67 VVTQSISELRKSLKDNDEDSPVYIATVPKRG 97 >UniRef50_A3VIF4 Adenylate/guanylate cyclase/hydrolase, alpha/beta fold family protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VIF4_9RHOB Length = 393 Score = 96.4 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 37/235 (15%), Positives = 81/235 (34%), Gaps = 2/235 (0%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F T+ + + + + +L++ + G ++ +D +I+ +W IVSD + Sbjct: 5 FGTCEIDTDAHEFRRDGSVIALEPQVFDLLVLFASNPGLLIGRDRLIDEIWNGRIVSDAA 64 Query: 71 LTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 ++ I ++R G ++T+ R+G+RF QV ++ T TS Sbjct: 65 ISSRINAVRRAVGDDGARQMVLQTVPRRGFRFVAQVENAQLKARETQPGERQAIRIATSQ 124 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + ++ + + + + + R Y G Sbjct: 125 DGTRIAFATSGAGPVLLRAGHFLTHLERDWGSPVWRPMLDRLATGRRL-VRYDQRGTGLS 183 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLA 244 + TL ++ + A + + + SQ + I P+R RL Sbjct: 184 DQRPPTLTLDAMVADLTAVADAAGADRAPIFAASQGVPVAIAFAAACPDRVSRLV 238 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichi... 360 6e-98 UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Ta... 323 1e-86 UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonel... 319 1e-85 UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum... 301 4e-80 UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 299 2e-79 UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Esche... 295 2e-78 UniRef50_B5ZPU5 Transcriptional regulator domain protein n=11 Ta... 293 1e-77 UniRef50_B7RJ24 Putative regulatory protein, possibly two-compon... 290 9e-77 UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curviba... 288 3e-76 UniRef50_C8SQ16 Transcriptional regulator domain protein n=1 Tax... 282 2e-74 UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=P... 275 2e-72 UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leg... 273 8e-72 UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax... 270 6e-71 UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax... 267 7e-70 UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax... 263 8e-69 UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax... 262 3e-68 UniRef50_Q2KD09 Probable two-component response regulator protei... 258 3e-67 UniRef50_Q28KX4 Transcriptional regulatory protein-like protein ... 253 8e-66 UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobiu... 253 1e-65 UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=... 248 2e-64 UniRef50_C3KQE3 Probable adenylate class-3/4/guanylyl cyclase n=... 248 3e-64 UniRef50_A6GR68 Transcriptional regulatory protein-like protein ... 248 4e-64 UniRef50_B5JPL6 Tetratricopeptide repeat domain protein n=1 Tax=... 247 8e-64 UniRef50_A9E7U9 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 244 4e-63 UniRef50_A0NYE8 Putative regulatory protein, possibly two-compon... 244 4e-63 UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax... 241 4e-62 UniRef50_Q28L26 Transcriptional regulatory protein-like protein ... 238 4e-61 UniRef50_Q98LH3 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 237 7e-61 UniRef50_B6B5A4 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 236 1e-60 UniRef50_Q98EW6 Adenylate cyclase; Cya3 n=3 Tax=Rhizobiales RepI... 236 1e-60 UniRef50_B1Y588 Transcriptional regulator domain protein n=1 Tax... 235 3e-60 UniRef50_C3KN58 Probable adenylate class-3/4/guanylyl cyclase n=... 234 7e-60 UniRef50_A6UAU6 Tetratricopeptide TPR_2 repeat protein n=3 Tax=R... 231 4e-59 UniRef50_Q89CY1 Bll7664 protein n=1 Tax=Bradyrhizobium japonicum... 230 7e-59 UniRef50_D0CVN3 Adenylate cyclase protein n=1 Tax=Silicibacter l... 229 2e-58 UniRef50_Q98LH2 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 227 6e-58 UniRef50_A3W697 Transcriptional regulatory protein-like n=3 Tax=... 226 1e-57 UniRef50_A1TS46 Transcriptional regulator domain protein n=2 Tax... 226 1e-57 UniRef50_B9NM62 Adenylate cyclase Cya3 n=1 Tax=Rhodobacteraceae ... 226 1e-57 UniRef50_B5ZU37 Adenylate/guanylate cyclase with TPR repeats n=8... 225 3e-57 UniRef50_A6UDI5 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 ... 225 3e-57 UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, ... 223 8e-57 UniRef50_Q9Z3Q0 Putative adenylate cyclase 3 n=1 Tax=Sinorhizobi... 223 2e-56 UniRef50_A6UCV6 Adenylyl cyclase class-3/4/guanylyl cyclase n=15... 222 2e-56 UniRef50_A1B7Q0 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 221 6e-56 UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidat... 218 3e-55 UniRef50_C3MIJ5 Adenylate cyclase 3 n=7 Tax=Rhizobium RepID=C3MI... 218 4e-55 UniRef50_B5ZNG5 Adenylate/guanylate cyclase with TPR repeats n=1... 218 5e-55 UniRef50_A0LHH5 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 ... 216 1e-54 UniRef50_C6B2R4 Adenylate/guanylate cyclase with TPR repeats n=3... 216 2e-54 UniRef50_A1ZY11 Adenylate cyclase; Cya3 n=1 Tax=Microscilla mari... 214 5e-54 UniRef50_Q1MES5 Putative adenylate cyclase n=4 Tax=Rhizobium Rep... 213 1e-53 UniRef50_Q022A1 Transcriptional regulator domain protein n=1 Tax... 212 2e-53 UniRef50_A8UFP6 Putative adenylate/guanylate cyclase n=1 Tax=Fla... 211 3e-53 UniRef50_Q89G09 Blr6539 protein n=1 Tax=Bradyrhizobium japonicum... 211 3e-53 UniRef50_Q2SFI0 FOG: TPR repeat n=1 Tax=Hahella chejuensis KCTC ... 211 4e-53 UniRef50_A3I071 Adenylate cyclase protein n=1 Tax=Algoriphagus s... 210 1e-52 UniRef50_C3KMT2 Probable adenylate class-3/4/guanylyl cyclase n=... 209 1e-52 UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobac... 209 2e-52 UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultu... 208 3e-52 UniRef50_B5JIE4 Bacterial transcriptional activator domain famil... 208 4e-52 UniRef50_A5PAK2 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 207 6e-52 UniRef50_Q6W140 Probable adenylate class-3/4/guanylyl cyclase n=... 207 7e-52 UniRef50_B5JQ34 Bacterial transcriptional activator domain famil... 206 1e-51 UniRef50_Q1IP04 Serine/threonine protein kinase with TPR repeats... 206 1e-51 UniRef50_Q89CK6 Blr7791 protein n=2 Tax=Bradyrhizobium japonicum... 206 2e-51 UniRef50_Q1ISU5 Serine/threonine protein kinase with TPR repeats... 206 2e-51 UniRef50_C6AV68 Adenylate/guanylate cyclase with TPR repeats n=4... 206 2e-51 UniRef50_A6UG63 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 ... 204 5e-51 UniRef50_Q021X4 Serine/threonine protein kinase with TPR repeats... 204 6e-51 UniRef50_A8TLG8 Putative uncharacterized protein n=1 Tax=alpha p... 204 7e-51 UniRef50_Q7NE08 Glr4072 protein n=1 Tax=Gloeobacter violaceus Re... 204 8e-51 UniRef50_UPI0001907507 adenylate/guanylate cyclase n=4 Tax=Rhizo... 203 1e-50 UniRef50_B5JJC9 Tetratricopeptide repeat domain protein n=1 Tax=... 203 1e-50 UniRef50_A4A7B5 Adenylyl cyclase class-3 family n=2 Tax=unclassi... 203 2e-50 UniRef50_Q01U02 TPR repeat-containing protein n=2 Tax=Candidatus... 202 2e-50 UniRef50_A1ZHF0 Adenylate cyclase; Cya3, putative n=1 Tax=Micros... 202 3e-50 UniRef50_C3KQQ8 Probable adenylate class-3/4/guanylyl cyclase n=... 201 3e-50 UniRef50_B5JPL3 Tetratricopeptide repeat domain protein n=2 Tax=... 201 3e-50 UniRef50_Q89G05 Bll6543 protein n=1 Tax=Bradyrhizobium japonicum... 201 5e-50 UniRef50_Q5LMB3 Adenylate/guanylate cyclase n=1 Tax=Ruegeria pom... 201 5e-50 UniRef50_A8TWN7 Adenylate cyclase cya3 n=4 Tax=Alphaproteobacter... 199 2e-49 UniRef50_A9DZ64 Serine/threonine protein kinase n=1 Tax=Kordia a... 198 4e-49 UniRef50_Q89ET6 Blr6986 protein n=1 Tax=Bradyrhizobium japonicum... 197 5e-49 UniRef50_A9GYL5 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 197 5e-49 UniRef50_A3JWJ0 Putative regulator protein n=1 Tax=Rhodobacteral... 197 7e-49 UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) ... 197 7e-49 UniRef50_C6W151 TPR repeat-containing protein n=1 Tax=Dyadobacte... 197 9e-49 UniRef50_B4RFP5 Adenylate cyclase n=1 Tax=Phenylobacterium zucin... 196 1e-48 UniRef50_A6UKN0 Adenylyl cyclase class-3/4/guanylyl cyclase n=6 ... 194 4e-48 UniRef50_D0DB83 Transcriptional regulator domain protein n=1 Tax... 194 5e-48 UniRef50_C8SMN4 TPR repeat-containing protein n=1 Tax=Mesorhizob... 194 6e-48 UniRef50_Q02AP4 Serine/threonine protein kinase n=1 Tax=Candidat... 192 2e-47 UniRef50_B8KJR3 TPR repeat-containing protein n=1 Tax=gamma prot... 191 6e-47 UniRef50_A4ABU3 Adenylate/guanylate cyclase protein n=1 Tax=Cong... 191 7e-47 UniRef50_Q89CU8 Bll7697 protein n=1 Tax=Bradyrhizobium japonicum... 191 7e-47 UniRef50_B1M705 Adenylate/guanylate cyclase with TPR repeats n=8... 190 8e-47 UniRef50_Q89CQ9 Blr7737 protein n=5 Tax=Bradyrhizobium RepID=Q89... 190 8e-47 UniRef50_C3ME30 Adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 R... 189 2e-46 UniRef50_D0CP82 Transcriptional regulator domain protein n=4 Tax... 189 2e-46 UniRef50_Q1IJ33 Serine/threonine protein kinase with TPR repeats... 188 3e-46 UniRef50_A5CFV3 Putative adenylate/guanylate cyclase protein n=1... 188 4e-46 UniRef50_B7RXI6 Tetratricopeptide repeat domain protein n=1 Tax=... 188 4e-46 UniRef50_Q1IRP3 Serine/threonine protein kinase n=1 Tax=Candidat... 187 7e-46 UniRef50_Q1ITM5 Serine/threonine protein kinase with TPR repeats... 186 1e-45 UniRef50_A7HAK8 Protein kinase n=1 Tax=Anaeromyxobacter sp. Fw10... 185 3e-45 UniRef50_Q01NG0 Serine/threonine protein kinase n=1 Tax=Candidat... 184 8e-45 UniRef50_B6B7E9 Adenylate cyclase Cya3 n=1 Tax=Rhodobacterales b... 183 1e-44 UniRef50_Q0ASW3 TPR repeat-containing protein n=1 Tax=Maricaulis... 183 1e-44 UniRef50_Q98JC9 Adenylate cyclase n=1 Tax=Mesorhizobium loti Rep... 183 1e-44 UniRef50_B8KPN2 TPR repeat-containing protein n=1 Tax=gamma prot... 182 2e-44 UniRef50_Q7NLM6 Serine/threonine protein kinase n=1 Tax=Gloeobac... 181 4e-44 UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes Re... 180 9e-44 UniRef50_Q1IQW3 Serine/threonine protein kinase with TPR repeats... 180 1e-43 UniRef50_A4APJ2 Probable serine/threonine kinase n=2 Tax=unclass... 180 1e-43 UniRef50_UPI0001905C45 two-component response regulator protein ... 179 2e-43 UniRef50_B0UEE6 Tetratricopeptide TPR_2 repeat protein n=1 Tax=M... 178 3e-43 UniRef50_UPI0001903BD8 transcriptional regulator domain-containi... 177 5e-43 UniRef50_Q0BZ36 TPR domain protein n=1 Tax=Hyphomonas neptunium ... 177 6e-43 UniRef50_D2LHL5 Putative adenylate/guanylate cyclase n=1 Tax=Rho... 177 8e-43 UniRef50_Q024X1 Serine/threonine protein kinase with TPR repeats... 177 9e-43 UniRef50_Q1MH13 Putative uncharacterized protein n=10 Tax=Rhizob... 177 1e-42 UniRef50_A6D228 Putative transmembrane adenylate cyclase n=1 Tax... 176 1e-42 UniRef50_A9DT30 Adenylate cyclase cya3 n=1 Tax=Oceanibulbus indo... 175 3e-42 UniRef50_A0NQZ6 Putative uncharacterized protein n=1 Tax=Labrenz... 174 5e-42 UniRef50_Q13CI3 TPR repeat n=5 Tax=Rhodopseudomonas palustris Re... 174 5e-42 UniRef50_Q1YFU6 Putative adenylate cyclase n=1 Tax=Aurantimonas ... 174 6e-42 UniRef50_Q029D0 Serine/threonine protein kinase with TPR repeats... 173 1e-41 UniRef50_Q0ASW0 Integral membrane protein-like protein n=1 Tax=M... 172 2e-41 UniRef50_C3KKQ7 Putative adenylate cyclase n=1 Tax=Rhizobium sp.... 172 3e-41 UniRef50_B4R917 Adenylate cyclase n=1 Tax=Phenylobacterium zucin... 171 5e-41 UniRef50_B8IB76 Adenylate/guanylate cyclase n=2 Tax=Methylobacte... 171 6e-41 UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein ... 169 1e-40 UniRef50_Q124D4 Integral membrane protein-like n=1 Tax=Polaromon... 169 2e-40 UniRef50_B2JV68 Tetratricopeptide TPR_4 n=1 Tax=Burkholderia phy... 169 2e-40 UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobact... 169 2e-40 UniRef50_A3W4X2 Adenylate/guanylate cyclase n=2 Tax=Roseovarius ... 169 3e-40 UniRef50_Q1IU41 Serine/threonine protein kinase with TPR repeats... 168 4e-40 UniRef50_A3HTU7 Probable adenylate/guanylate cyclase protein n=1... 168 4e-40 UniRef50_Q7NN29 Serine/threonine kinase n=1 Tax=Gloeobacter viol... 168 4e-40 UniRef50_A4A737 Membrane protein n=3 Tax=unclassified Gammaprote... 168 5e-40 UniRef50_A7HB42 Transcriptional regulator, SARP family n=1 Tax=A... 168 5e-40 UniRef50_Q022M7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=C... 167 7e-40 UniRef50_A4ABU1 Adenylate cyclase protein n=1 Tax=Congregibacter... 166 1e-39 UniRef50_A3X527 Transcriptional regulatory protein-like n=1 Tax=... 166 1e-39 UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 T... 166 2e-39 UniRef50_A6GH84 Serine/threonine protein kinase n=1 Tax=Plesiocy... 164 5e-39 UniRef50_Q47YV7 Putative adenylate cyclase n=1 Tax=Colwellia psy... 164 8e-39 UniRef50_A3WEA4 Adenylate cyclase n=1 Tax=Erythrobacter sp. NAP1... 163 1e-38 UniRef50_Q1ILY3 Serine/threonine protein kinase with TPR repeats... 163 1e-38 UniRef50_Q1GF82 Tetratricopeptide TPR_2 n=1 Tax=Ruegeria sp. TM1... 161 4e-38 UniRef50_A3WHL2 Putative uncharacterized protein n=1 Tax=Erythro... 161 6e-38 UniRef50_C1F8Q5 Non-specific serine/threonine protein kinase n=1... 160 1e-37 UniRef50_B1ZFX8 Transcriptional regulator domain protein n=1 Tax... 160 1e-37 UniRef50_Q6W1E3 Putative uncharacterized protein n=3 Tax=Rhizobi... 160 1e-37 UniRef50_Q1MM50 Putative uncharacterized protein n=4 Tax=Rhizobi... 160 1e-37 UniRef50_A4YMM9 Putative uncharacterized protein n=2 Tax=Alphapr... 159 2e-37 UniRef50_B7RJ20 Adenylate cyclase Cya3 n=2 Tax=Proteobacteria Re... 159 3e-37 UniRef50_A4ABU0 Adenylate/guanylate cyclase protein n=1 Tax=Cong... 158 3e-37 UniRef50_A5P6N6 Putative uncharacterized protein n=1 Tax=Erythro... 158 4e-37 UniRef50_C5SN08 Transcriptional regulator, CadC n=1 Tax=Asticcac... 157 8e-37 UniRef50_C1F9V6 Serine/threonine-protein kinase n=1 Tax=Acidobac... 157 9e-37 UniRef50_Q2NDU5 Putative adenylate cyclase protein n=1 Tax=Eryth... 157 1e-36 UniRef50_A4F1M4 TPR repeat protein n=1 Tax=Roseobacter sp. SK209... 156 2e-36 UniRef50_Q01Y07 Serine/threonine protein kinase n=1 Tax=Candidat... 151 6e-35 UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_S... 150 1e-34 UniRef50_C8STQ6 Transcriptional regulator, SARP family n=1 Tax=M... 149 2e-34 UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, ... 149 3e-34 UniRef50_UPI0001909FC7 hypothetical protein RetlC8_25020 n=1 Tax... 148 4e-34 UniRef50_UPI0001902632 hypothetical protein Retl8_03555 n=2 Tax=... 147 1e-33 UniRef50_C1F5C9 Putative transcriptional regulatory protein n=1 ... 146 1e-33 UniRef50_A9GH81 Protein kinase n=1 Tax=Sorangium cellulosum 'So ... 144 1e-32 UniRef50_Q1IIA4 Serine/threonine protein kinase with TPR repeats... 143 1e-32 UniRef50_A8I3P3 Putative uncharacterized protein n=1 Tax=Azorhiz... 141 5e-32 UniRef50_A4XFE5 Transcriptional regulator, SARP family n=1 Tax=N... 137 8e-31 UniRef50_A3SFP7 TPR repeat-containing protein n=2 Tax=Sulfitobac... 136 2e-30 UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanel... 136 2e-30 UniRef50_Q0AQA4 Lysine decarboxylase transcriptional regulator, ... 134 8e-30 UniRef50_A4BGW4 Putative regulatory protein n=1 Tax=Reinekea bla... 132 2e-29 UniRef50_A6G2I7 Serine/threonine protein kinase n=1 Tax=Plesiocy... 130 1e-28 UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis a... 129 2e-28 UniRef50_B6B8M4 Transcriptional regulator, sarp family n=2 Tax=R... 129 3e-28 UniRef50_B1YN09 Transcriptional regulator, winged helix family n... 128 5e-28 UniRef50_Q7CST1 Putative uncharacterized protein n=1 Tax=Agrobac... 127 9e-28 UniRef50_Q0APN8 Integral membrane protein-like protein n=1 Tax=M... 127 1e-27 UniRef50_B5WFU1 Transcriptional regulator, winged helix family n... 123 1e-26 UniRef50_Q0ASW4 Integral membrane protein-like protein n=1 Tax=M... 123 1e-26 UniRef50_A3RZQ6 Putative uncharacterized protein n=3 Tax=Ralston... 123 2e-26 UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseud... 122 2e-26 UniRef50_A9GXN7 Protein kinase n=1 Tax=Sorangium cellulosum 'So ... 122 2e-26 UniRef50_Q89XL4 Transcriptional regulator n=1 Tax=Bradyrhizobium... 122 3e-26 UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, ... 121 4e-26 UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein ... 121 6e-26 UniRef50_Q1YZ13 Transcriptional activator CadC n=1 Tax=Photobact... 120 1e-25 UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vi... 120 1e-25 UniRef50_D1TLX7 Transcriptional regulator, winged helix family n... 118 6e-25 UniRef50_Q01QR8 Transcriptional regulator, CadC n=1 Tax=Candidat... 116 1e-24 UniRef50_B2T985 Transcriptional regulator, winged helix family n... 114 9e-24 UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanel... 114 1e-23 UniRef50_A5ED47 Transcriptional regulator n=1 Tax=Bradyrhizobium... 112 2e-23 UniRef50_C9Q7M5 Transcriptional regulator CadC n=2 Tax=Vibrio Re... 112 2e-23 UniRef50_P23890 Transcriptional activator cadC n=99 Tax=Enteroba... 112 3e-23 UniRef50_B8ESY3 Transcriptional regulator, winged helix family n... 112 3e-23 UniRef50_Q12S47 Transcriptional regulatory protein-like protein ... 112 4e-23 UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=... 111 5e-23 UniRef50_Q12RS3 Transcriptional regulatory protein-like protein ... 110 8e-23 UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=... 110 8e-23 UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobac... 110 9e-23 UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regul... 110 9e-23 UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium... 110 1e-22 UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum... 110 1e-22 UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobact... 110 1e-22 UniRef50_Q2S7R1 DNA-binding winged-HTH domains n=1 Tax=Hahella c... 110 1e-22 UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, ... 110 1e-22 UniRef50_UPI0001699C2A putative adenylate cyclase n=1 Tax=Endori... 110 1e-22 UniRef50_B4CW77 Two component transcriptional regulator, winged ... 110 2e-22 UniRef50_Q1MK13 Putative transcriptional regulator n=1 Tax=Rhizo... 110 2e-22 UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID... 109 2e-22 UniRef50_B1KD58 Putative transcriptional regulator, CadC n=1 Tax... 109 2e-22 UniRef50_A3D2S0 Transcriptional regulator, CadC n=3 Tax=Shewanel... 109 2e-22 UniRef50_Q39G50 Transcriptional regulator, winged helix family n... 109 3e-22 UniRef50_C3KKU6 Putative transcriptional regulator n=1 Tax=Rhizo... 109 3e-22 UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanel... 109 3e-22 Sequences not found previously or not previously below threshold: UniRef50_Q01NM4 Tetratricopeptide TPR_2 repeat protein n=1 Tax=C... 212 2e-53 UniRef50_A6UBL5 Transcriptional regulator, SARP family n=3 Tax=R... 159 2e-37 UniRef50_A4ANW1 Probable serine/threonine kinase n=1 Tax=Flavoba... 151 8e-35 UniRef50_B6A473 Transcriptional regulator, SARP family n=4 Tax=R... 141 5e-32 UniRef50_Q0FKG0 Putative uncharacterized protein n=1 Tax=Roseova... 139 3e-31 UniRef50_B9JD99 Putative uncharacterized protein n=1 Tax=Agrobac... 136 2e-30 UniRef50_Q2JZX4 Trifolitoxin synthesis protein n=9 Tax=Rhizobium... 135 2e-30 UniRef50_B6A4C8 Transcriptional regulator, SARP family n=4 Tax=R... 135 4e-30 UniRef50_C6ATW4 Transcriptional regulator, SARP family n=7 Tax=R... 134 9e-30 UniRef50_A0NQS2 Putative uncharacterized protein n=1 Tax=Labrenz... 125 4e-27 UniRef50_Q1D1Z4 Serine/threonine protein kinase n=2 Tax=Cystobac... 124 8e-27 UniRef50_Q4CAF1 TPR repeat:Sel1-like repeat:Sel1-like repeat n=1... 121 5e-26 UniRef50_B7K3M3 TPR repeat-containing protein n=7 Tax=Cyanothece... 121 7e-26 UniRef50_B7K9Z0 Tetratricopeptide TPR_2 repeat protein n=1 Tax=C... 118 4e-25 UniRef50_Q467V6 Putative uncharacterized protein n=2 Tax=cellula... 115 5e-24 UniRef50_Q01VS7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=C... 114 7e-24 UniRef50_B2J9B9 TPR repeat-containing protein n=1 Tax=Nostoc pun... 114 1e-23 UniRef50_Q01PY1 Serine/threonine protein kinase with TPR repeats... 113 1e-23 UniRef50_C5SI97 Putative uncharacterized protein n=1 Tax=Asticca... 112 3e-23 UniRef50_B3PWN4 Hypothetical conserved protein n=2 Tax=Rhizobium... 111 4e-23 UniRef50_A5CFS7 Putative transcriptional regulator n=1 Tax=uncul... 111 6e-23 UniRef50_C5BKV6 Tetratricopeptide repeat domain protein n=2 Tax=... 111 6e-23 UniRef50_Q118Y7 TPR repeat n=4 Tax=Bacteria RepID=Q118Y7_TRIEI 110 8e-23 UniRef50_Q112K5 TPR repeat n=1 Tax=Trichodesmium erythraeum IMS1... 109 2e-22 UniRef50_Q24FG4 TPR Domain containing protein n=1 Tax=Tetrahymen... 109 2e-22 UniRef50_B5ZVZ5 Putative uncharacterized protein n=1 Tax=Rhizobi... 109 3e-22 UniRef50_B7K7N7 TPR repeat-containing protein n=1 Tax=Cyanothece... 109 3e-22 >UniRef50_P76639 Uncharacterized protein ygeH n=32 Tax=Escherichia RepID=YGEH_ECOLI Length = 458 Score = 360 bits (924), Expect = 6e-98, Method: Composition-based stats. Identities = 458/458 (100%), Positives = 458/458 (100%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV Sbjct: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI Sbjct: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 Query: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD Sbjct: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS Sbjct: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL Sbjct: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL Sbjct: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 Query: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP Sbjct: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP 420 Query: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR Sbjct: 421 NPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICMR 458 >UniRef50_A6UHF5 Transcriptional regulator domain protein n=13 Tax=Proteobacteria RepID=A6UHF5_SINMW Length = 531 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 67/462 (14%), Positives = 152/462 (32%), Gaps = 38/462 (8%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + + E LT + V + + +L+ L+ + VV KD ++++VW IV Sbjct: 1 MQFMFADYVLDRERRELTLRGQVVSVGPQVFDLLLHLVGTRDRVVSKDELLQAVWGGRIV 60 Query: 67 SDESLTRCIYSLRCIFEK-IGYDRCIETI------------------------YRKGYRF 101 S+ ++T I ++R G R + T+ Sbjct: 61 SESTITSHINAVRKAIGDTGGEQRLVRTVARKGFRFVGDIRIADSAEARQPGGPGSAGHT 120 Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 S + SI + PF D +V+ I + +I L+ Sbjct: 121 SLGSKEPPPALALPDKPSITVLPFQNLSGDADQDYFADGVVEDIITALSRIRWLFVIARN 180 Query: 160 AT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--V 216 ++ + + Y + G + + + +LIDA + + + Sbjct: 181 SSFTYKGREVDLKEVGQELGVRYVLEGSVRKAGNRVRITGQLIDATAGTHLWAERFEGTL 240 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIY 275 D++ + ++++ + + + + D L G L++ T E+I Sbjct: 241 DDIFELQDRVAESVVGAIAPQLERAEIERAKRKPTGSLDAYDYYLRGMAHLHNGTREAIE 300 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDIT 334 A+ +F ++ Y A C+ L+G + L ++ Sbjct: 301 AALPLF---YKAIELDPDFASAYAGAAWCYFWRKLNGWMIHRAQEIAEGARLARLAVELG 357 Query: 335 TVDGKILAIMGLIT-GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D L G L G L ++A++ + ++A ++ + + E A Sbjct: 358 RDDAVALTRSGHALGHLVGDLDGGIALIDRARLLNPNLAPAWFLGGFLRVFRGEPESAIE 417 Query: 394 CIDKSLQLEPRRRKAVVIKEC--VDMYVPNPLKNNIKLYYKE 433 I+++ +L P ++ ++ + + + Sbjct: 418 HIERAARLSPLDQEMFRMQAGTALAHFFAGRFDLASAWAERA 459 >UniRef50_P43015 Transcriptional regulator hilA n=48 Tax=Salmonella enterica RepID=HILA_SALTY Length = 553 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 118/447 (26%), Positives = 219/447 (48%), Gaps = 9/447 (2%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + + F + + + G L + ++V IP KE VL++LLE+AG +V K+ +++ VW + Sbjct: 10 SNKKFVFDDFILNMD-GSLLRSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDA 68 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 V++ESLTRCIY+LR I + R IET+Y +GYRF+ V + +++AI P Sbjct: 69 EVNEESLTRCIYALRRILSEDKEHRYIETLYGQGYRFNRPVVVVSPPAPQPTTHTLAILP 128 Query: 125 FTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVT 184 F + + L+ +V+ +S GL P+ T C + + +PDY+++ Sbjct: 129 FQ-MQDQVQSESLHYSIVKGLSQYAPFGLSVLPVTITKNCRSVKDILELMDQLRPDYYIS 187 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLA 244 G++ + N + IE++ K L+ + + E H + + + I + + +R Sbjct: 188 GQMIPDGNDNIVQIEIVRVKGYHLLHQESIKLIE-HQPASLLQNKIANLLLRCIPGLRWD 246 Query: 245 KQDQGYKNHYLSDE-MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 + N S L GK EL +TP S+ +A+ + + ++ YC LAE Sbjct: 247 TKQISELNSIDSTMVYLRGKHELNQYTPYSLQQALKLLTQC---VNMSPNSIAPYCALAE 303 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQ 363 C++S+A G + + A KA E +++ + + L ++GLI + + V +LF+Q Sbjct: 304 CYLSMAQMGIFDKQNAMIKAKEHAIKATELDHNNPQALGLLGLINTIHSEYIVGSLLFKQ 363 Query: 364 AKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPL 423 A + S A + YY F ++EEA I++ L+L+P R A + K + Y + Sbjct: 364 ANLLSPISADIKYYYGWNLFMAGQLEEALQTINECLKLDPTRAAAGITKLWITYYHTG-I 422 Query: 424 KNNIKLYYK-ETESESHRVIIDNILKL 449 + I+L + ++ I+ ++ + Sbjct: 423 DDAIRLGDELRSQHLQDNPILLSMQVM 449 >UniRef50_Q89V41 Bll1217 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q89V41_BRAJA Length = 516 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 71/448 (15%), Positives = 141/448 (31%), Gaps = 24/448 (5%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + + LT V + + +L+ L+ VV KD +I +W + IV Sbjct: 1 MRFCFENNVLDGDLRELTCAGVAVPLQPQVFDLLLYLVAQRARVVSKDDLISQIWSDRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFS------------GQVFKTKINED 113 SD +L I + R G R I+TI RKG+RF Sbjct: 61 SDSALNSRINAARKALGDDGATQRLIKTIPRKGFRFIGEVREDVAVTLAPAEPAAAPART 120 Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQ 170 +IA+ F + + + I + K ++ + + Sbjct: 121 VADRPAIAVLAFENMSGDPEQDYFGDGISEDILTALSKQRWFMVIARNSSFIYKGRAVHI 180 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIID 228 Y V G + + + + +L DA + + + + + I + Sbjct: 181 RQIAEELGVRYIVEGSVRKADKRVRITAQLNDAASGSHLWAERYDRELVNVFAVQDEITN 240 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 I+ + + + + + D ++ + T + A + +R Sbjct: 241 AIVAAIEPQIHAAENFRSHRKPPASLDAWDLLMRALSHYWRVTRQDHEAAQALLER---A 297 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 I + +LA HM A G EL A A D +G + Sbjct: 298 IGIDPNYGQALSVLAANHMFGAHLGWVELARVAPIAEAAALAAVRCDHEDAWAHTGLGSV 357 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + + + FEQA + + + Y AL + + +++ ++++L PR Sbjct: 358 YFSTRRLADALSEFEQALALNPNFSLAQGYYALALSYAGRSKDSFEAAQRAIRLSPRDPS 417 Query: 408 AVVIK--ECVDMYVPNPLKNNIKLYYKE 433 + + I L + Sbjct: 418 LAIYHGIAGYARFTERRYDEAIALAREA 445 Score = 53.2 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/157 (12%), Positives = 38/157 (24%), Gaps = 9/157 (5%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 S R + + + A + AAQ+A+ L Sbjct: 360 STRRLADALSEFEQALALNPNFSLAQGYYALA--LSYAGRSKDSFEAAQRAIRLSPR--- 414 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 I G + + L +A H D+ Y A+ A Sbjct: 415 -DPSLAIYHGIAGYARFTERRYDEAIALAREAIRHRGDLTGAYRVLAVSAGMTGDGMLAE 473 Query: 393 ICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKL 429 + + + + +P + + + L Sbjct: 474 MALGELRRTQP---GISLHWIATQLPWASDADREHYL 507 >UniRef50_Q98JB4 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98JB4_RHILO Length = 541 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 87/475 (18%), Positives = 173/475 (36%), Gaps = 28/475 (5%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + Y F + + L +GN + + + +L L+ + VV KD ++++VW+ Sbjct: 24 SNLPYLFEDFALDGDRRELRRGNSLIAVEPQVFDLLQYLIRNRERVVSKDDLVDAVWQGR 83 Query: 65 IVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVF------------KTKIN 111 IVSD +L + + R + G R + T R+G+RF G V K Sbjct: 84 IVSDATLASRVNAARSALQDNGEQQRLVRTFPRRGFRFVGTVHEEAGAEATAPVEPAKPG 143 Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHI 168 + SIA+ PF D +V+ I +I L+ ++ + + Sbjct: 144 LGIPARPSIAVLPFVNLSGDPDQDYFADGMVEDIITGLSRIRWLFVIARNSSFTYKGRAV 203 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFI 226 Y + G + + + + +LID ++ + + + ++ I Sbjct: 204 DMKQVGQELGVRYVLEGSVRKVGSRVRITGQLIDTEDGGHLWAERYDRELTDVFALQDEI 263 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQ 285 +++ + R + + + + D L ++Y F P+ R + + D+ Sbjct: 264 TISVVAAIEPNLRRAEIERVKRQRPDSLDAYDLFLRALPDVYTFMPQGAARGLPLLDQ-- 321 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 I+ + A H +L + G + E + KA + + D LA+ G Sbjct: 322 -ALAIEPSYALVHGFAAWAHQTLFIRGGMQAEHS-GKASRHAHAAIEHGSGDAMALALAG 379 Query: 346 LITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 GL K++ F QA S A +Y + + + A +++L+L P Sbjct: 380 FTIGLVEHDRKLADEAFSQALSLSASCAFVYAFGCVPVAYGGDATRAIDWGEQALRLNPL 439 Query: 405 RRKAVVIKECVDM--YVPNPLKNNIKLYYKETESESHRVIIDNILK--LKQLTRI 455 V + + ++ + I + E I+ L L +L RI Sbjct: 440 DAMNCVPQGMIGFGNFLAGRHEQAIAAGRRAVEMNPGFSILHGWLAAPLARLGRI 494 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 6/129 (4%), Positives = 33/129 (25%), Gaps = 14/129 (10%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 RA+ ++ + + + ++ + H ++A+ + Sbjct: 422 DATRAIDWGEQALRLNPLDAMNCVPQGMIGFGNFLAGRH---------EQAIAAGRRAVE 472 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + + + G+ + + + ++ Sbjct: 473 MNPGFSILHGWLAAPLARLGRIEEAKAAGSRLMALDP-----HFTIGRWSAAVGLAPAII 527 Query: 393 ICIDKSLQL 401 + ++++L Sbjct: 528 DDVTEAMRL 536 >UniRef50_B7NQ98 Putative Transcriptional regulator n=3 Tax=Escherichia coli RepID=B7NQ98_ECO7I Length = 565 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 145/448 (32%), Positives = 241/448 (53%), Gaps = 9/448 (2%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 N Y F + L +GIL N++ +IP KELGV+I+LL + G +V K+ II+ VW Sbjct: 8 NNTQQYIFGDF-VLKNNGILLFKNKEYHIPPKELGVIILLLNADGEIVSKEEIIDKVWSA 66 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 + SDESLTRCIY+LR + + + IET+Y +GYRF+ + NE S ++A+F Sbjct: 67 SVASDESLTRCIYALRKLLHENKQCKYIETVYGRGYRFTVPIVIVTDNEPVKSTTTLAVF 126 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 PF T +++ L L+ ELVQ +S GL P + TN +D + + F+++ P+Y++ Sbjct: 127 PFRTE-GSINVLKLHYELVQGLSKYAFCGLDILPASVTNEASDFSTIHQFINKIGPEYYI 185 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRL 243 G++ L+IELI A+ LI + N ++ ++ + + ++ Sbjct: 186 MGQVVHYGKNWRLFIELIHARTHKLIDHQSIDF-NPDNPLSVLLSQVINILIEKIPNINF 244 Query: 244 AKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLA 302 + S + G+ E+Y +TPES+ RA+ IF ++ Q T YC LA Sbjct: 245 KSINTQQMPSLDSAVMYMNGRMEMYRYTPESLKRALVIF---RDCVSTQPQNTLPYCCLA 301 Query: 303 ECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFE 362 ECH+SLAL G SE + A A+ ++ +I + + L ++GLI+GL + VS++LF+ Sbjct: 302 ECHISLALLGISEQKQAITTAVTSIEKALEINPSNSQALGLLGLISGLKDEHSVSNVLFK 361 Query: 363 QAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNP 422 QA + + +YYY++L+ F N + A I+KS+ LEP + ++K + +Y +P Sbjct: 362 QAHLLKPNSPDVYYYQSLLCFLNGDLARAFNLIEKSIALEPNKMGISILKLII-LYYTSP 420 Query: 423 LKNNIKLYYK-ETESESHRVIIDNILKL 449 L N I +++ + II +IL + Sbjct: 421 LDNAISFALNLNSQNTCNNPIITSILAM 448 >UniRef50_B5ZPU5 Transcriptional regulator domain protein n=11 Tax=Rhizobiales RepID=B5ZPU5_RHILW Length = 502 Score = 293 bits (749), Expect = 1e-77, Method: Composition-based stats. Identities = 74/460 (16%), Positives = 156/460 (33%), Gaps = 20/460 (4%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F + G L + ++ V + + + +L L+ G ++ K ++++ W V Sbjct: 4 SRFAFGPFVLDPAAGTLLRNDDPVAVGDRGVKLLAALVGRPGEILGKAELMDAAWPGRAV 63 Query: 67 SDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVF----KTKINEDNTSDYSIA 121 + +LT I LR + I T+ R GYRF+G + + SIA Sbjct: 64 EEGNLTVQIAQLRKLLGPAADGGEWIATVPRVGYRFTGALNLLGGVKRKALPLPDRLSIA 123 Query: 122 IFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA-TNFCNDHISQNSFLSRFK 178 + PF + + L + + ++ GL+ + ++ + Sbjct: 124 VLPFLNISDDPEQEFFADGLTEDLITDLSRMPGLFVIARNSAFSYKGKAVDMREIAGELG 183 Query: 179 PDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHK 236 Y + G + + +LIDA + + + +D++ + + I++ + Sbjct: 184 VRYLLEGSARRAAGRVRINAKLIDAVSGDHLWAERFDRSLDDIFAVQDEVAEKIVEALLG 243 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 +R + D + ++ + D +P++ A + R + E Sbjct: 244 ---RLRAPPPRNRPSSLEAYDLCVRARRLMDD-SPQAAEEAHLMLTR---AISLDPDYAE 296 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 Y LA H +H E ALEL + D ++ + Sbjct: 297 AYRWLAMNHWMGRIHSGGPTEFNRNLALELARRAVTLDPNDAGCRWVLAYLFAYERDFAE 356 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 + F +A + A + + + ++ E I K+ +L P + Sbjct: 357 ADAAFAKAIELDPNEADTFAALSDITVLAGRVGEGLEHIRKAFRLNPFPASWYYLTLGQA 416 Query: 417 MYVPNPLKNNIKLYYK-ETESESHRVIIDNILKLKQLTRI 455 Y ++ + ET S R + L QL R+ Sbjct: 417 QYAAGQYAAAVETLRRDETYRTSSRRFLAASLA--QLGRL 454 >UniRef50_B7RJ24 Putative regulatory protein, possibly two-component response regulator n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJ24_9RHOB Length = 521 Score = 290 bits (741), Expect = 9e-77, Method: Composition-based stats. Identities = 69/467 (14%), Positives = 150/467 (32%), Gaps = 27/467 (5%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + GIL +G I + +L +L+ +V KD I+E+VW IV Sbjct: 1 MRYRFDHFTLDIDRGILLEGGRDAPIEPRAFKLLALLVTHHDRIVTKDEIVENVWDGRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF-- 123 SD ++ I + R + G + + TI +G RF G + + E + A Sbjct: 61 SDAAIATVIKTTRKVLSDDGVGQKYLRTIRGRGVRFVGTLMPSLAAEARKPETDQAQPAP 120 Query: 124 ------------PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHI 168 PF + + + + ++ L +T F Sbjct: 121 VQTASRPTIAILPFQMVGYSETFSAIADAIPAELISCLSRLRWLAVVSRGSTFRFRETEP 180 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFI 226 + + Y +TG + +V + +EL D ++ ++ S + +++ T I Sbjct: 181 DLATIHAALGAKYCLTGLVEIFGSVIAVSVELSDTRSQDVVWSERFSGTISDINETRNDI 240 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQ 285 + +++ + + + + G + +Y F A + F++ Sbjct: 241 VTHVISALELHVPLNEAKRARLRPPENLDAWSIYHLGLQHMYRFNKTDNLIAASHFEK-- 298 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIM 344 + + + + A S + A + ++ +D + Sbjct: 299 -ATILDPEFARAHAARSFTSFQSAFLKYSTDAAEEASNTRRFAEKAVELDPIDPFANFTL 357 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 G L + ++A S + A +Y + EA + ++ L P Sbjct: 358 GRAHWLISDPEAGMPWIDRAIELSPNFAQGFYAHGWGDVMAGRGVEALQQLQTAISLSPL 417 Query: 405 RRKAVVIKE--CVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 ++ + +N + K + +I I + Sbjct: 418 DPFLYAMQSACGLAYLQMEDYENAVLWAEKGARAPGSHFLIGAIAAM 464 >UniRef50_C9Y6H6 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9Y6H6_9BURK Length = 526 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 76/452 (16%), Positives = 157/452 (34%), Gaps = 30/452 (6%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + + L + V + + VL VL++ AG +V K + + VW ++V + + Sbjct: 17 FGNFVLQRHERRLLCDGQTVMVGARAFDVLCVLVDHAGELVTKKKLFDLVWPGLVVEENN 76 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGYRF--------------SGQVFKTKINEDNTS 116 L + SLR I I T+ +GYRF K + ++ Sbjct: 77 LQVHVSSLRRILGADA----IATVPGRGYRFTLRLAAVPSAVETAQASKGKGRASDQQAY 132 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSF 173 +IA+ PF + + L + I K L ++ + N S + Sbjct: 133 RRTIAVLPFVNLNADPEQEYFSDGLAEDIISHLTKSPWLLVVSRNSSFAYRNTKESNQAV 192 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 S + Y V G + + + + EL+D + ++ P+ ++ I I+ Sbjct: 193 GSALRARYLVLGSVRRAGTMLRMTAELVDTSTGETLWADRFDRPLSDMFAVQAEISGQIV 252 Query: 232 QTVHKP-ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + S + +N D ++ + + TPE + +A ++ R +I Sbjct: 253 SAIEPVYLHSEERVASEVPNQNMEHWDLLMRARWHFWRTTPEHVMQAQSLLTR---ALEI 309 Query: 291 QTLKTECYCLLAECHMSLALHGKSELELAA-QKALELLDYVSDITTVDGKILAIMGLITG 349 + + L++ HM+ +E AA +A L D +G Sbjct: 310 KPGDSASLSLMSFTHMAKLWGAWAEDPRAAVAEANRLALVAVRNDERDAFAHFTLGTALS 369 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV 409 +GQ + + E A A+ + + + EEA I +++ P Sbjct: 370 CAGQMQAAIAELECALGLYPQAAAAAGELGRLLVFSGRTEEAEEFILQAVDASPHDPHLS 429 Query: 410 VI--KECVDMYVPNPLKNNIKLYYKETESESH 439 + + ++ + ++ + T + Sbjct: 430 LWIRSRAIGCFIDGRHADAVRYAREATAKRAD 461 >UniRef50_C8SQ16 Transcriptional regulator domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SQ16_9RHIZ Length = 496 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 53/449 (11%), Positives = 139/449 (30%), Gaps = 18/449 (4%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 F + +L V + + +L LL+ V+ K + ++ W ++V Sbjct: 1 MDVEFGNFRLKRTERLLLGPTGPVELSARSFDILAALLDRPDEVIGKAELFDAAWPGLVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI-AIFPF 125 + +L + +LR + I T++ +GY+++G + + A+ PF Sbjct: 61 EENTLQVHVSALRKLLP----VEMIVTVHGRGYKYAGPKPSAATDPASMQARPSIAVLPF 116 Query: 126 TTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYF 182 + + + + I K ++ R Y Sbjct: 117 DNMSGDPEQDYFSDGITEDIIAQLGKFREFLVIGRNSSFRVRGKKGDLAEVAMRLGVQYV 176 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERS 240 V G + + + + ++L DA ++ + H +D++ I I + + R+ Sbjct: 177 VEGSVRKIGSRIRVSVQLTDAASMAHVWGEHYDRQLDDIFAIQDDITQMIAARLARQART 236 Query: 241 VRLAKQD-QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 ++ N + L + + + A+ L + Sbjct: 237 AIASRARAHPTGNVSAYENYLRALQLVSQ-----LETAVQAAPFLGIAVKLDPDFAGALG 291 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI 359 +L+ S + L + + + G + + + + Sbjct: 292 MLSFVETIKYF--WSNDINDVEVGLRTAKAALQLDSEEAYAHLANGFASMFLRRFREAET 349 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 ++A + + + Y AL+ + K + A ++++ + +P + + Sbjct: 350 SLDRAVSLNPNDPFILIYNALLLNYVGKYDAALRELEQARRRDPFAVGWFNDVLGIILTN 409 Query: 420 PNPLKNNIKLYYKETESESHRVIIDNILK 448 + + + K S ++ I Sbjct: 410 AGRYREGLASFAKMPTLHSWSLVYVAICH 438 >UniRef50_Q7NUQ7 Invasion genes transcription activator n=8 Tax=Proteobacteria RepID=Q7NUQ7_CHRVO Length = 561 Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats. Identities = 124/446 (27%), Positives = 218/446 (48%), Gaps = 9/446 (2%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + F + + + G+L +Q+ +P KEL VL LLE+AG +V KD +++ VW + Sbjct: 10 NRQFVFGDFVLQFD-GVLCHQEQQISVPPKELAVLTALLEAAGELVSKDALLDKVWPDGD 68 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 V++ESLTRCIY+LR I + +R I+T+Y KGYRFS V + ++AI PF Sbjct: 69 VNEESLTRCIYALRRILLEDKSNRYIDTVYGKGYRFSRPVAVVSRPTASAQKCTMAILPF 128 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTG 185 T LD L L+ LVQ +S GL P T C D + + + +PDY++ G Sbjct: 129 RTD-GQLDSLELHAALVQCLSRYSPFGLVVMPATITRNCGDIADIIAMIDQLRPDYYLAG 187 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 ++ Q L +EL+ A L+ + + + + + + + +R Sbjct: 188 QVQQQGDSWLLRVELVRADGHQLVHHESIEIGPGEHIAALQTR-LASLLPQRIPGLRWHH 246 Query: 246 QDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAEC 304 + + + L G+ EL TP S+ RA+ +F + + Q YC LAEC Sbjct: 247 GNGSQLDSLDMAITYLNGRHELQQHTPSSLKRALALFLQCTSS---QPGNALPYCSLAEC 303 Query: 305 HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQA 364 +++LA G + E A A + +D + + + L ++ L++ L GQ ++ LFEQA Sbjct: 304 YLALAQLGLFDQERALDGAQQAVDRAVALDAANPQALGLLALLSSLRGQQTIAEALFEQA 363 Query: 365 KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLK 424 ++ + D ++YY A F +++I A+ +D L+ +P R A +++ + Y + L Sbjct: 364 RMLAPDSIDIHYYHAWHLFLSDRIPLAQRSLDACLERDPSRIAASMLQLWLT-YCEHRLD 422 Query: 425 NNIKLYYKE-TESESHRVIIDNILKL 449 + L ++ + ++ ++L L Sbjct: 423 EAVALGKRQLCQYGQDHPVLQSMLGL 448 >UniRef50_Q1MK68 Putative adenylate cyclase n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MK68_RHIL3 Length = 522 Score = 273 bits (699), Expect = 8e-72, Method: Composition-based stats. Identities = 77/404 (19%), Positives = 159/404 (39%), Gaps = 17/404 (4%) Query: 15 LTLTEDGILT-QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTR 73 + E L + + + + + VL L+++A +V K ++E+VW V+D+SL + Sbjct: 31 VVDLEGETLRLENGDAIALRPQAFAVLRHLVQNANRLVSKAELLEAVWGGAAVTDDSLVQ 90 Query: 74 CIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLD 133 CI+ +R Y + T+ R+GYR S + +E SIA+ PF T Sbjct: 91 CIHEIRRALGDERYA-VLATVSRRGYRLSLER----SDESALGGPSIAVLPFATMSGGEP 145 Query: 134 PLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQN 190 LV+ I + KI GL+ ++ F + + + + Y + G + Q+ Sbjct: 146 NDYFADGLVEDIITNLSKIPGLFVIARNSSFGFRGEKADLRTIAAELRVRYLLQGSLRQS 205 Query: 191 NAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQ 248 +Y +L+D + + ++ ++ + + + I+ ++ R + + + Sbjct: 206 GGRLRIYAQLVDGASATHVWADRFEGAATDVFDLQDRLTEQIVGSIEPSVRRAEIERAHR 265 Query: 249 GYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS 307 D L + TP +A+ + R ++Q + A C+ Sbjct: 266 KRPESLDAYDLYLRALPHAHANTPAQTDKALQLLAR---SIELQPDYVAAHGYAAWCYEQ 322 Query: 308 LALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG-LSGQAKVSHILFEQAKI 366 L + A AL D I + D + ++I + L+ + + ++A Sbjct: 323 RYLRNGLDPADKAA-ALSHADIALGINSDDPQAMSIGAFVRANLTRDYDAAVEVLDRALA 381 Query: 367 HSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVV 410 + + + + ALV H+E+ + A K+L+L P Sbjct: 382 WNNNSTLAFGFSALVSAHSERHQRAVEHAHKALRLSPLDDPLSY 425 >UniRef50_B1M5U0 Transcriptional regulator domain protein n=3 Tax=Rhizobiales RepID=B1M5U0_METRJ Length = 525 Score = 270 bits (691), Expect = 6e-71, Method: Composition-based stats. Identities = 76/462 (16%), Positives = 155/462 (33%), Gaps = 30/462 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + L++ ++ + + +L VL+E VV +D ++E+VW IV Sbjct: 1 MIYRFGPFTLDSARRELSRDGAEIAVEPQVFDLLRVLIERRDRVVSRDDLLEAVWNGRIV 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF-- 123 S+ +L I + R G R I T+ RKG RF G V + A Sbjct: 61 SEATLGSRINAARTAIGDTGTGQRWIRTLPRKGVRFVGAVREAASEVSPGIAPEDAAEPG 120 Query: 124 ---------------PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCN 165 PFT + + + I + ++ GL+ +T + Sbjct: 121 VTWRAGPRLPAVAVLPFTNMSADPEQDYFADGMTEEIITALSRVSGLFVIARNSTFTYRG 180 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTS 223 I Y V G + + + + +L+DA + ++ +D++ Sbjct: 181 AAIDVRRVGQELGVGYVVAGSVRRGGSRLRITGQLVDAGTGAHLWADSFDGGLDDVFALQ 240 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFD 282 + + + + + + + H D +L L DFT + A+ D Sbjct: 241 ERVAARAAAAIEPTLQLAEIRRLGRDAPAHPDAYDRLLRANARLADFTAAGMAAALDHLD 300 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGK-SELELAAQKALELLDYVSDITTVDGKIL 341 + A C G ++ E A+ L + D ++L Sbjct: 301 ---EALALDPGYAPAMAAAAYCRAQCHFQGWIAQGEAERAAAVRLAWGAVERAPGDAQVL 357 Query: 342 AIMGLITGLSGQ--AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + + + + LF +A + + + A + + E R ++++L Sbjct: 358 WMAAFAVWNMSETGRERARDLFGRALLVNPNSALALTLAGWIETMCGRAEAGRAMVERAL 417 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 QL PR + ++ + + + + + E +R Sbjct: 418 QLNPRDPRGWLMSGVMAVAAVSEADYPKAIRWAERALAQNRR 459 >UniRef50_B0UQ98 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B0UQ98_METS4 Length = 510 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 76/424 (17%), Positives = 149/424 (35%), Gaps = 18/424 (4%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 F TE +L + V + + + VL L+ AG V K+ + W ++ V D Sbjct: 5 LDFGPFRLDTEMKLLLRDGAPVALGPRAVAVLQALVARAGAPVSKEELFRVAWPDLAVED 64 Query: 69 ESLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRFSGQ----VFKTKINEDNTSDYSIAIF 123 +LT I +LR R IET+ R+GYR+ G + S+A+ Sbjct: 65 SNLTVQIAALRRALAGSEDGARWIETLPRRGYRYVGPVGAAPSMPPVMPRFPDRPSVAVL 124 Query: 124 PFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSFLSRFKPD 180 P + + I+ +I L+ ++ + I Sbjct: 125 PLRNLSGDPAEDYFGDGMAEDITAGLSRIKWLFVTARSSGAVYRGREIDPCEAGRALGAR 184 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTVHKPE 238 Y + G + + A + + L++++ ++ + P++ + I +++ + Sbjct: 185 YLLLGSLRKETARIRVALRLVESEAGGVVWAEAYDRPLEGVFALQDDIAMSVVGAIEPNL 244 Query: 239 RSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 R + + D +L + +++ P RA+ + R +++ Sbjct: 245 RQAEAERVRRLRPESLDAYDLVLRAQSDVFTGMPAESSRALGLLGR---ALELEPRYGLA 301 Query: 298 YCLLAECHMSLALH-GKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS-GQAK 355 + A CH +L L G SE++ AA + + D L G + + Sbjct: 302 HAFAAMCHHNLFLRAGLSEVDRAAS--IRHAEKAIAHGRDDALALTFAGFSLAMDAHDRR 359 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 FE A S A+ Y +VH E A +++L+L P A + Sbjct: 360 AGSAAFEAALAVSPSSATTYILGGVVHGWAGDAERAITWGERALRLSPFDPWAFAAYHAL 419 Query: 416 DMYV 419 + Sbjct: 420 ALGH 423 >UniRef50_C8SMB1 Transcriptional regulator domain protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMB1_9RHIZ Length = 501 Score = 263 bits (673), Expect = 8e-69, Method: Composition-based stats. Identities = 59/440 (13%), Positives = 145/440 (32%), Gaps = 18/440 (4%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + F G L++ ++ ++ K +L L G VV K ++++VW + Sbjct: 7 GQVFQFGGFTLDLGKGTLSRADQPAFLRPKAYALLTHLACHIGRVVPKSELMDTVWPGVF 66 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 V+++SLT+ + +R + + + T+ ++GY + T+ ++ + +A+ F Sbjct: 67 VTEDSLTQSVREIRKVLGE----ERVRTVSKRGYMLVPE---TEAVPESGAQPIVAVLRF 119 Query: 126 TTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFC--NDHISQNSFLSRFKPDY 181 + + I + + ++ + + SR DY Sbjct: 120 RNDGADPANQEIVDGFAEDIINGLARFGTVTVLARNSSFSFASHSPAEWPAIRSRIGADY 179 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPER 239 V G + + + LIDA N + + + L Q I++ I+ + Sbjct: 180 LVEGSVRRQAERIIAAVSLIDAANSAQLWGDRYQAEAAGLFTIQQDIVEQIVGRLVVKVS 239 Query: 240 SVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + L + + + +L G + D + A + + Sbjct: 240 NAGLTRASRRPVTSLASYELVLRGVALMRDPAQSDLKAAAA---LFEAAISKDPSYGLAH 296 Query: 299 CLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSH 358 LA ++ + G + KA +L + ++ I L+ + + Sbjct: 297 TYLALSYVLNSEFGPTSS-SVLAKARDLAERGIALSPDQATAHRIQSLVRLSMRDHQAAE 355 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMY 418 + A + A + + EA + ++++++P + +Y Sbjct: 356 HHLQIALELNPGDAECIEQMGHLLTMRGRPLEALSWLARAIRIDPLNPHWYQYDRSLALY 415 Query: 419 VPNPLKNNIKLYYKETESES 438 + + + T Sbjct: 416 MLGEYRPAAEALELATRPTP 435 >UniRef50_B8ESP8 Transcriptional regulator domain protein n=4 Tax=Rhizobiales RepID=B8ESP8_METSB Length = 522 Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats. Identities = 77/429 (17%), Positives = 139/429 (32%), Gaps = 29/429 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T L + I + +L L+ES V K+ I+ VW ++ Sbjct: 1 MIYLFEDFELDTARVELRTNGVAIAIEPQVFALLCFLVESRDRVATKEEIVARVWNGRVI 60 Query: 67 SDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRF------------------SGQVFK 107 SD ++ I S R G R I TI+ G+RF Sbjct: 61 SDSAIASRIKSARRALGDDGGAQRLIRTIHGIGFRFVADVRLAATRIESIAPTAETAPDT 120 Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFC 164 + TS SIA+ PF + L + ++ L+ ++ F Sbjct: 121 DRSQAVETSRPSIAVLPFRLLGAADPQFSIGDALPHDLITELSRLRWLFVIARGSSFRFR 180 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNT 222 + Y ++G + +++ + +EL DA++ ++ S +H Sbjct: 181 GAEPDVGRVRTALNVRYCLSGVVEIHHSAMIISVELSDAEDSGVVWSERFRTQASAVHEI 240 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIF 281 + I+ ++ + + + G +Y F A +F Sbjct: 241 REEIVRAVINALELQIPLNEARRARLKSPERLDAWSAYHLGLHHMYRFNKADNSVATALF 300 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKI 340 +R + ++ Y L+ H A ++ + AA A + + VD Sbjct: 301 ER---AAAMEPGFARAYAGLSFTHFQSAFLSYADNVSEAANLAQRAAEQSLERDPVDPFG 357 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 MG L G S E+A + + A Y RA +R +D++L Sbjct: 358 NFTMGRAFWLCGDLDASLPWLERANALNPNYAQAKYSRAWAQALLGNAASSRANVDEALA 417 Query: 401 LEPRRRKAV 409 L P Sbjct: 418 LSPLDPLLY 426 >UniRef50_Q2KD09 Probable two-component response regulator protein n=3 Tax=Rhizobium etli RepID=Q2KD09_RHIEC Length = 510 Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats. Identities = 76/442 (17%), Positives = 153/442 (34%), Gaps = 18/442 (4%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 N F E+G L + + V I + +L VLL + G VV K ++++VW + Sbjct: 2 NSQHIAFGHFEFSAENGCLLRDDRPVAIGARGASLLAVLLAAQGGVVSKSALMDAVWPGL 61 Query: 65 IVSDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS---- 119 V + +L+ I +LR + I T+ R GYRFSG+V D Sbjct: 62 AVEESNLSVQIAALRKLLGPASDGSEWIATVPRVGYRFSGRVESACDGTDGEWHAQAGSK 121 Query: 120 --IAIFPFTTSLNTLDPLILNQELVQ--IISNKKIDGLYTYPM-AATNFCNDHISQNSFL 174 IA+ PF + L + II+ + L A+ N + Sbjct: 122 LGIAVLPFENPGGDAEKQYLADGIADNLIIALTRFRWLRVASRGASFKDRNGSRDPRAVG 181 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQ 232 ++ V G I + + L +A + S H + E+ I + I Sbjct: 182 LALGVNFLVDGAIRYTGDRIRISVHLAEATKGATVWSEHYDLQLAEIFAVQDAIAERIAA 241 Query: 233 TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQT 292 V N D + G + + + A F + ++ Sbjct: 242 AVEPELLLRHGLAVAPHTGNITAWDLVRQGTFNFHKVSKPTHLLARRFF---REAVELDP 298 Query: 293 LKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGLS 351 + E A + L +G ++ A Q+ L + + + +++ + Sbjct: 299 MLPEAQIWRARVNAGLIAYGWTDDPAADGQEGLTAALRAIYLDARNPYSHYALAIVSAYT 358 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 G+A + + E++ + A + + + AR + + L+L P + V Sbjct: 359 GRADQAILAAERSIELGSSFALGHLVLGMARLFSGDAAGARRPLSRGLELNPHDPQNGVW 418 Query: 412 K--ECVDMYVPNPLKNNIKLYY 431 + ++ + ++ +++ + Sbjct: 419 FSLLMLALFFSDDVEGALEVGH 440 >UniRef50_Q28KX4 Transcriptional regulatory protein-like protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28KX4_JANSC Length = 515 Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats. Identities = 59/430 (13%), Positives = 126/430 (29%), Gaps = 20/430 (4%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 F + + +L +G + V + + +L VL VV +D I+++VW + IV Sbjct: 3 QIRFADFVLDRRRRVLLRGRDIVPLGARAFDLLEVLHTHRDRVVSRDEIMQAVWPDTIVG 62 Query: 68 DESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 D +L + +LR + I T+ +G F+ + ++ S+ + PF Sbjct: 63 DNNLNVQVGNLRRLLGADA----IVTVPGRGLHFALEDWQPGPELALPDRPSVVVLPFEA 118 Query: 128 SLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSFLSRFKPDYFVT 184 D L V+ I+ + L+ + + + Y V Sbjct: 119 LGGDPDFDWLADGFVEDITTELSRFRDLFVVARNSAFTYRQMPRDLRAVTRELGVRYVVE 178 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVR 242 G + + +LIDA N + + + D + T + I + Sbjct: 179 GSVRARADRVRVAAQLIDAANGGQVWAENFDSDMSDHFETQARVARAIATCLSPQIDRAE 238 Query: 243 LAKQD-QGYKNHYLSDEMLAGKKELYD----FTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 + ++ + + P RA + + + Sbjct: 239 ADRIRVLAPEDLTAHGLAQRAWAVISSGEMAYDPGLRDRAEDL---ARQALALDANSALA 295 Query: 298 YCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 + + A HG +E +E I D + + + + Sbjct: 296 WRVRAWVAWWHVYHGTTESVPGTLAAGIEAATRAIAIDKTDHQARRLRAQLHFMKQDVAS 355 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV--VIKEC 414 + QA + + A + N + + + L+ PR + Sbjct: 356 ALPELRQAHNMNPNCAITLCWLGFYEAVNGRADIGVPLAEAGLRRSPRDPARGSMLSALG 415 Query: 415 VDMYVPNPLK 424 + Sbjct: 416 FAQFAARNYD 425 >UniRef50_B5ZTP7 Transcriptional regulator, CadC n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZTP7_RHILW Length = 479 Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats. Identities = 74/420 (17%), Positives = 146/420 (34%), Gaps = 20/420 (4%) Query: 25 QGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEK 84 + V I K L +L L+ + G VV KD ++++VW +IV+++SLT+ I +R Sbjct: 2 RRGRDVEIGAKPLAMLTYLVRNEGRVVSKDELMQAVWPGVIVTEDSLTQAISQIRKAIGA 61 Query: 85 IGYDRCIETIYRKGYRFSGQVF--KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELV 142 G I T++R+GY F + + +A+ PF D + Sbjct: 62 DG---LIRTLFRRGYLFENKQSVANAMPEKAFVRALPLAVAPFRLIGPGSDAAWFAEAFS 118 Query: 143 QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELID 202 ++ L Y + + + + D + G + + + + L + Sbjct: 119 TEVA----SRLARYHDLEVTWLPEKAVPSPLRATLGFD--LNGMVQSVDGMMKVTAMLTE 172 Query: 203 AKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD--- 257 + ++ S + I + I+ + + +A + + D Sbjct: 173 MSSGRIVWSASWDGAIANALEIQSEIAEGIVNALAGHGVLLNVAAEHLHRRAAADRDAFE 232 Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 L G+ F E +A+ F R ++I L + + LA H LA G E Sbjct: 233 LYLRGRYHTNRFNREDAEKALHCFQR---ATEIDPLFSRAWLGLAWSHDELASFGVDMSE 289 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 A AL ++ D + L +G + G GQ + + ++A A + Sbjct: 290 NDAA-ALNSARRAVELDPFDAEALVALGEMLGNMGQMEAAEAALDRALGLGPSNADVLAM 348 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 + +IEE +K+ +L P + + + + + Sbjct: 349 FSGWAPVFGRIEEGIAAAEKARRLNPSWPIWYDSSFRRASFHAGRYEEALSFVLRRQPNT 408 >UniRef50_B6B5N5 Tetratricopeptide repeat domain protein n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5N5_9RHOB Length = 813 Score = 248 bits (634), Expect = 2e-64, Method: Composition-based stats. Identities = 77/476 (16%), Positives = 160/476 (33%), Gaps = 33/476 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T+ L+ + V + L LI ++ + G +V KDM+ E+ W + +V Sbjct: 1 MIYGFEQFTIDTDRFQLSGPDGLVEAEPQALEFLIHMIRNRGQLVTKDMLHETFWPDRVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF-- 123 SD +L+ + + R + G R I T Y +G+ F +V + K E A Sbjct: 61 SDAALSTLVRNARRLVGDSGEEQRIIATRYGRGFVFRAEVEERKGPEVVGEVMRDAEASA 120 Query: 124 -------------PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDH 167 PF T D L + + + + + + F Sbjct: 121 RPRVEGAPAIVVLPFEIVGETADAHGLGEGVTEEVMAALARTRWFPLVARNRVRTFLELP 180 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQF 225 Y V G + ++ L+++L D + I + + L Sbjct: 181 PETRHPFRELGATYLVEGGVFRDGDDIRLHLQLTDTEPALHIHVSRHDLSYKGLFRLLDE 240 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRL 284 + + T+ AK ++ + E + G+ + ++ A + F R Sbjct: 241 VSTIVTATIQPEILEAERAKAERVAPESRNAWQEFVLGQHLIAAPDSDANAAARSHFRR- 299 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAI 343 ++ + LA H+ + SE + A + + D +I Sbjct: 300 --ALALEPGSGRIHAGLAMTHLWDYKYDWSESAELSLASAARDAERALTLAPDDSWAWSI 357 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + + + +A A Y ++ V ++ + EEA D+++QL P Sbjct: 358 LAICELSLRRFDAAVASAGKAIDVDPASAMAYGCQSWVLAYSGRYEEALTAFDRAMQLSP 417 Query: 404 RRRKAVVI--KECVDMYVPNPLKNNIK-----LYYKETESESHRVIIDNILKLKQL 452 R+ + + + + + + + HR+ ++ L +L Sbjct: 418 NDRRRGLWLTGKGISQFGLGDFEGALASARALIALSPNHPSGHRMKCASLASLGRL 473 >UniRef50_C3KQE3 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQE3_RHISN Length = 579 Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats. Identities = 50/381 (13%), Positives = 119/381 (31%), Gaps = 15/381 (3%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINE----DNTSD 117 I VSD + FE G R ++ I + + + Sbjct: 133 GGICVSDAVHKQLAGKTDFAFEDTGE-RMLKNIAQPVRVWRWAGDQAPTTAAALLPLPGK 191 Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFL 174 SIA+ PF + + + + + I + L+ ++ F I Sbjct: 192 PSIAVLPFDNLSSQPEKTYFSDGITEDIITGLARFRSLFVIARNSSFAFRGKPIDLAEIG 251 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQ 232 R Y + G + ++ + +LI+A + + +D++ + + I+ Sbjct: 252 RRLGVSYLLEGSVRRSGDRVRITAQLIEAATGAHLWAERYDRSLDDIFAVQEEVAQMIVA 311 Query: 233 TVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + + + D +L G + ++ RA +F++ + Sbjct: 312 ALFGRIQEADFERSSRMPTASLTAYDCLLRGLAHFRAYAEDANQRACELFEK---AVALD 368 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 + LA ++ + E A +++ + + I+ I L Sbjct: 369 PRYALAHSYLALVRITFHGWATAPTE-ILDTAFAEARRATELDPQESRCHRILSEICLLR 427 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 + ++ QA + + A + V + EEA C++ +++L P Sbjct: 428 REYDMAEEHACQAFDLNPNDADAMMEKGRVLALRGRPEEALNCLEAAVRLNPLHPPWYNS 487 Query: 412 KECVDMYVPNPLKNNIKLYYK 432 + +Y + + Sbjct: 488 SFGIALYSLRRFGEAARALKR 508 >UniRef50_A6GR68 Transcriptional regulatory protein-like protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GR68_9BURK Length = 510 Score = 248 bits (632), Expect = 4e-64, Method: Composition-based stats. Identities = 67/447 (14%), Positives = 163/447 (36%), Gaps = 20/447 (4%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 SY F + +L + E V + + L+ L+ + V+ KD ++++VW ++ Sbjct: 2 DSSYFFDHFELRANERLLLREGEAVNLGSRTFDFLMCLVTNHTRVLSKDELLQTVWPGMV 61 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTK--INEDNTSDYSIAIF 123 V + +LT +LR + + I T+ +GY+FS V +T+ +IA+ Sbjct: 62 VEENNLTVQTSALRKLLG----SQAISTVTGRGYQFSLPVRRTEVSSKPTVQKHSTIAVL 117 Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPD 180 PF D L + L++ + ++ G A+T F + ++ + + Sbjct: 118 PFKVLGEQTDLRFLAEGLLEDVIALLARVPGFLVISQASTQIFDHSSVALPEIAEQLQVQ 177 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDEL--HNTSQFIIDNILQTVHKPE 238 + V G I + + + + ++L +A+ ++ ++ + + I +L + Sbjct: 178 FVVLGSIRRVDEIIRVNVQLAEAQTGQVLWNSRFECSPASSADLQEEIARGLLSELEPAL 237 Query: 239 RSVRLAKQDQGYKNHYLSD-EMLAGKKELYD--FTPESIYRAMTIFDRLQNKSDIQTLKT 295 +A+ + N+ + L ++ + A +L+N +I + Sbjct: 238 TKAEIAQIRRQRPNNLDAWAHYHEATGALAQLGWSEAGLRDAR---HQLENSIEIDSNFG 294 Query: 296 ECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 + LA G A L + ++ + +++ G GQ Sbjct: 295 LAHAHLALLTALSRNIGLLPHSDAVLASGLTAANTAIELDGGNSEVMGYAGCALCDLGQT 354 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKEC 414 + I + A + A ++E + +++ P+ R+ Sbjct: 355 RQGLITLKAALQLNPSNAQAQVAHGAALVLMNELEGGIAQMRLGMRISPKDRRLGFWLWI 414 Query: 415 VDMYV--PNPLKNNIKLYYKETESESH 439 + ++ N + ++ K + ++ Sbjct: 415 LSCFLLRANRPEEALEEAIKAVQHDTR 441 >UniRef50_B5JPL6 Tetratricopeptide repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL6_9BACT Length = 607 Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats. Identities = 43/340 (12%), Positives = 101/340 (29%), Gaps = 15/340 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 A+ F + + + + K+ GL ++ F + + Sbjct: 156 AVLAFENLSEDAGNEYFSDGISEELLNVLAKVSGLKVSARTSSFHFKDKDTPIPEIAQQL 215 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVH 235 Y + G + + + +LI A + F + S+ + ++ I I + + Sbjct: 216 GVAYVLEGSVRKAGDTVRITAQLIKADSGFHLWSDSFTRELKDIFAVQDEIAGLIAKQLQ 275 Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 +A + N D L G T +A+ +++ + Sbjct: 276 LELGVSTVA---KKTVNPEAHDAYLKGLFNHAKETKAGYEKAIEFYEQ---ALEKDPNYA 329 Query: 296 ECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG-LSGQA 354 ++ +++L KA ++ + + +G I Sbjct: 330 SANAAMSWSYLTLGWWAHLPPREVFPKARVAAQKALELDNANAQAHITLGAIKMIYEFDW 389 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKEC 414 + F++A S + + + V+ + E + +L+L+P A + Sbjct: 390 VGADKEFKRALELSPNDSQAHNMVGWVYRIQGEHEASMKAFRTALELDPLNVLAN-FQVG 448 Query: 415 VDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTR 454 + I Y++ E + L L Q R Sbjct: 449 RAFFFARQYDQAIAHYHRMLELHPNH--FSTHLFLSQAYR 486 >UniRef50_A9E7U9 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9E7U9_9RHOB Length = 565 Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats. Identities = 53/347 (15%), Positives = 118/347 (34%), Gaps = 10/347 (2%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCND 166 E + SI + PF N+ D + L + + S + L+ +A + + Sbjct: 172 YRERAIPNQSIVVLPFEFQGNSEDDKWFAEGLTEDVTTSLSRFHNLFVISRDSAYMYRDR 231 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQ 224 + S + Y V G + ++ A + I+L+DA I ++L + Sbjct: 232 LKAPKQVASELRVRYVVEGSVRKSGARLRITIQLLDALLNRTIWGEQYNRNIEDLFDLQD 291 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 I I+ + N +L G++ L +T + + A ++F+ Sbjct: 292 EINQVIVSATAAQIEVTEQERTRLLPPANLLAYGIVLKGERYLSRYTQKDVQNARSLFE- 350 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILA 342 + + + Y + + + SE + +AL ++ D + Sbjct: 351 --AALESDSSYSRAYAASSRTSNLIWRYDWSEDTANSLDEALVFAQRAIEMDGSDARGFG 408 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G + + + +++A + + A++ A H+ + EE+ + K+++L Sbjct: 409 ELGFAHLYRKEHEAALNAYDRALKLNPNDANVMSDMADALAHSGRSEESIDLLQKAMRLN 468 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 P V + + IK K R I+ Sbjct: 469 PFYPDQYVWHLGGAYFNLKRYDDAIKTIQKMQNPTEGRRILAASYAY 515 >UniRef50_A0NYE8 Putative regulatory protein, possibly two-component response regulator n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYE8_9RHOB Length = 556 Score = 244 bits (623), Expect = 4e-63, Method: Composition-based stats. Identities = 84/435 (19%), Positives = 147/435 (33%), Gaps = 36/435 (8%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y F L +G E+V I + L +L++L+E+ +V KD +IE VW IVS Sbjct: 29 VYTFDGFELDGARFELRRGGERVAIEPQVLSLLLLLVENRDRLVSKDELIEHVWDGRIVS 88 Query: 68 DESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI------ 120 + ++ I + R G + I TI+ KG+RF + T S Sbjct: 89 ETAVAARIKAARKAVGDKGSAQKVIRTIHGKGFRFIAETEVTSAQVTAHPRPSDLITEEQ 148 Query: 121 -------------------AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM- 158 A+ PF I+ L I ++ L+ Sbjct: 149 AAPAIENLLKNALDGRPSIAVLPFQYFGEPGQHEIVADALPADIIADLSRLHWLFVIARG 208 Query: 159 AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--V 216 ++ F + S + Y +TG + T+ + LID + I + H + Sbjct: 209 SSFRFRGPDVDPLSAGRQLGVCYGLTGTVECTGGSLTIGVSLIDMTSSGTIWAEHYRAGL 268 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLA-GKKELYDFTPESIY 275 EL I +++ ++ + + G +Y F + Sbjct: 269 TELQQLRPEIESHVVASLAVQIPQNEARIARRRAPGELDAWACFHLGLDHMYRFNRQDNA 328 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDIT 334 RA +F + + + L+ H A S+ A ++A L + Sbjct: 329 RAAALFTQ---SLERDPYFSSAMGGLSFTHFQSAFMRFSDDPAAEVEEARALAQQAVETD 385 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 D G + L G+ + + F++A S A Y R LV + +A + Sbjct: 386 RFDPFAHFNAGRCSWLDGRLEDAIAWFDRATSLSPSFAQGVYTRGLVSVMAGQAAQADVD 445 Query: 395 IDKSLQLEPRRRKAV 409 + +L L P A Sbjct: 446 LALALDLSPLDPLAY 460 >UniRef50_A6ULB6 Transcriptional regulator domain protein n=1 Tax=Sinorhizobium medicae WSM419 RepID=A6ULB6_SINMW Length = 508 Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats. Identities = 77/460 (16%), Positives = 151/460 (32%), Gaps = 20/460 (4%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 Y F + + G+L + E V I + L +L LLE+ G +V K +IE W N IV D Sbjct: 6 YTFGDFVLDPRSGLLRRKGESVEIGSRGLALLQALLEARGGIVSKAELIERGWPNTIVED 65 Query: 69 ESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +LT I SLR I TI R GYR + ++ ++A+ PF Sbjct: 66 SNLTVQIASLRKALGPSPDGREWITTIPRAGYRLVTA--YAGASSLTSTRPALAVLPFIN 123 Query: 128 SLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCN-DHISQNSFLSRFKPDYFVT 184 D +V I + + + F N Y + Sbjct: 124 LDGGSDQGYFADGVVNEIITALSRFRSFAVVARNGSFFNNLRFPDVRLVAKELGVGYMLQ 183 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVR 242 G I + + + ++L+D + + ++ +D++ I ++++ V ++ Sbjct: 184 GNIRRPGSRLRISVQLVDG-SGTHLWAHSFDEELDDVSVFQDRIAESVVSLVEPHIQAAE 242 Query: 243 LAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 + + + + D L ++ + A + R L Sbjct: 243 IERSRRDRPGSTASYDIYLQALAKISTESELDNAEAYALLMRGIEAEPDNALLLAHAAWA 302 Query: 302 AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS-GQAKVSHIL 360 E ++ E + + + L + D ++A G+ + + + Sbjct: 303 LEHRHTMGWPSLGEDD--VGECVALARRGLEHAAGDAMVMAHCGVALLQTAKDYDWALAV 360 Query: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD---- 416 + A + + + L H H ++EA ++ +L P R A + Sbjct: 361 LQSAAEANPNNLMVVVRAGLAHLHCGSLDEALTHFQRASRLSPGDRGAHFSLCGIADVHL 420 Query: 417 ---MYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLT 453 Y L + V+I L ++ Sbjct: 421 IHGNYAEAITWAARALASNPNFDPNLWVLIAANAHLGRME 460 >UniRef50_Q28L26 Transcriptional regulatory protein-like protein n=1 Tax=Jannaschia sp. CCS1 RepID=Q28L26_JANSC Length = 527 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 70/461 (15%), Positives = 147/461 (31%), Gaps = 29/461 (6%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T+ L +G+E + + L LI L ++ G ++ KD + E W + +V Sbjct: 1 MIYAFEDFTIDTDRFQLARGDELIETEPQTLEFLIFLAQNQGQMLTKDTLHEVFWPDRVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF-- 123 SD +L+ + + R G R I T + +G+ F V + + S+A Sbjct: 61 SDAALSTLVRNARRAIGDSGEQQRVIATRHGRGFVFRADVREFSDPQPAAMPRSVAAAAP 120 Query: 124 -------------PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDH 167 PF T D L++ + + + + K F Sbjct: 121 SPRIAGAPALMVLPFEIVGETQDAAGLSEGVTEEVMAALSKSRWFPLIARNRVRTFQELS 180 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIA--SNHLPVDELHNTSQF 225 F Y V G + ++ ++++L D + I + + L Sbjct: 181 PETRHPFVGFGASYIVEGGVFRDGDDIRVHLQLTDTEPALHIHLSRHDFKYEGLFKLFDE 240 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRL 284 I + T K ++ + E + G+ L + A F+R Sbjct: 241 IATVVAATAQPELIKAEHQKAEKTDPEARSAWQEFVLGQYLLAAPDKPANAAARAHFER- 299 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAI 343 ++ + LA H+ + S+ + + A + + D +I Sbjct: 300 --AMSLEPGSGRIHAGLAMTHLWDYWYDWSQNAGISLETAARDAERALTLAPDDSWAWSI 357 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL-E 402 + + + V+ ++A A + A V + + +A D+++ L Sbjct: 358 LAICKLSLRRYDVALADAQRAIDADPASAMAHGCHAWVLAYAGRYRDALAAYDRAVALGG 417 Query: 403 PRRRKAVVIKEC--VDMYVPNPLKNNIKLYYKETESESHRV 441 P + V+ + + + + Sbjct: 418 PSDPRRVLWMTGRETAQFGLGDYEGALDTARELIALSPDNP 458 >UniRef50_Q98LH3 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98LH3_RHILO Length = 626 Score = 237 bits (604), Expect = 7e-61, Method: Composition-based stats. Identities = 46/348 (13%), Positives = 101/348 (29%), Gaps = 14/348 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCND 166 ++SIA+ PF + L + I + G + +T + Sbjct: 195 QPLAPPDNHSIAVLPFINMRGDSEQEFFTDGLTEDIITDLSNVSGFFVIARNSTFAYKGK 254 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDA-KNLFLIASNHLPVD--ELHNTS 223 Y + G ++N + ++LI+A + + + + ++ + Sbjct: 255 PTDVRQISRDLGVKYILEGSARRSNKRLRVNVQLINAGEGGNHVWAERFDREIADIFDVQ 314 Query: 224 QFIIDNILQTVHKPERSVRL-AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 + +++ + +L A+ Y GK + + A + Sbjct: 315 DEVTRRVVEAISGKLGEKKLVARSRPSNLEAYDLCVRSRGKC---NNSRSDNREACADLE 371 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 R I E + LA + + E AL +I D Sbjct: 372 R---AIQIDPNYCEAHSNLAISLLFGWIIWGEPQEPGRANALIHAQRAVEIDPDDSHARR 428 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 I+G + + F+ A + + A + + + + A +L++ Sbjct: 429 ILGCVQLYERNWDEAKSQFDAAVRLNPNNADAVAWMGELQIYLGDPQAALRACGAALRIN 488 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNI-KLYYKETESESHRVIIDNILKL 449 PR + + + L +ET R + L L Sbjct: 489 PRPPGWYFWIMGIAQISSGHYEEAVASLSREETYGTGSREHLVPALAL 536 >UniRef50_B6B5A4 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B5A4_9RHOB Length = 589 Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats. Identities = 53/407 (13%), Positives = 118/407 (28%), Gaps = 24/407 (5%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIY-------------RKGYRFSGQVFKT 108 + VS + LR FE +G + ++ I + + Sbjct: 136 GRVFVSASVYEQIRNRLRFGFEFLG-PQMLKNIAEPVAAYCVRSEVAGATMAATRRPEAP 194 Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCN- 165 + S+A+ PFT+ L + I K L+ ++ F Sbjct: 195 PAHRPPPGIPSVAVLPFTSLGGEPSDSWFADGLTEDIILNLSKFKNLFVIARNSSFFFKA 254 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTS 223 Y G + + A + +ELIDA+ I D++ Sbjct: 255 STKPPQEAARELGVRYVARGSVRRAAARVRIAVELIDAETGRTIWGERYDRNIDDIFAIQ 314 Query: 224 QFIIDNILQTVHKPERSVRLAK-QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 + D I+ + + + +L G++ ++ +T + A T+++ Sbjct: 315 DEVTDAIVAATAVLIEAQERKRMAQTAPADLAAYGYVLRGQQYIFRYTRQDNREAQTLYE 374 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKIL 341 R ++ + + + E A AL ++ D + Sbjct: 375 R---ALSRDQDYARASAAISRTLNIDWRYSWAKDAEHALDTALSYAQRAVELDPTDARGF 431 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 +G + + + + +A + + A L A H+ + A + ++++L Sbjct: 432 GELGFVHLYRKEHDAAIGAYRRALALNPNDADLLSDYADALAHSGDNQAAIGNLQQAMRL 491 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 P + Y I K + ++ Sbjct: 492 NPYFPDQYLWHLGGAYYNLKQYDAVIDTLTKMNNPTEGQRMLAASYA 538 >UniRef50_Q98EW6 Adenylate cyclase; Cya3 n=3 Tax=Rhizobiales RepID=Q98EW6_RHILO Length = 581 Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats. Identities = 59/408 (14%), Positives = 126/408 (30%), Gaps = 21/408 (5%) Query: 62 KNIIVSDESLTRCI-YSLRCIFEKIGYDRC--IETIYRKGYRFSGQVFKTKINEDNTSDY 118 +V + + L C F +G R IE R + Sbjct: 130 PGTVVVSGTAYDHLQGKLDCGFTPLGDLRLKNIERPVRAYRVETDASASVAAPPALPEKP 189 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLS 175 SIA+ PFT D LV+ I +++ + ++ + + Sbjct: 190 SIAVLPFTNMSGDPDQEYFADGLVEDIITGLSRVNSFFVIARNSSFTYKGRAVDLRQVGR 249 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQT 233 Y + G I + + + +L+DA + + ++ D ++ + + ++++ Sbjct: 250 ELGVRYVLEGSIRRAGSRVRISGQLVDAISGHHVWADRFEGDLSDIFDLQDKVTESVVGA 309 Query: 234 VHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQT 292 V R + + ++ D L Y T E + I Sbjct: 310 VEPSIRLQEIKQARMKPTDYISAYDLYLRALPRFYSMTREGFADVRRL---TNEALSIDP 366 Query: 293 LKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS- 351 L A E + + A+ + V D L + S Sbjct: 367 GFNLAKGLGAYIRSLSVSQCWHEPDD-VRVAVRMAREVLAEARDDPTSLRFAAQVIAYSA 425 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR----- 406 +++ E++ + + + A + V+ H+ + A ++++L P Sbjct: 426 KDYEMALGAIERSLLLNPNSAQGHTGSGWVNAHSSRPLVAIEHFHRAMRLSPVDPEKGIA 485 Query: 407 --KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 + ++ Y L+ SHRV+I ++KL +L Sbjct: 486 LSGIGMSYLMLERYEEALAWGERALHEMPNYGSSHRVVIMALVKLNRL 533 >UniRef50_B1Y588 Transcriptional regulator domain protein n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y588_LEPCP Length = 543 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 58/478 (12%), Positives = 133/478 (27%), Gaps = 47/478 (9%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y E ++ + E V + + VL+ L+ VV K+ ++E VW ++V Sbjct: 3 HRYTTGEFEVRPDERRVLLRGEPVPLGARAFDVLMCLIAQRERVVTKNELLEQVWPGMVV 62 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN------------ 114 + +LT + +LR +F + + TI +GYRF + +T Sbjct: 63 EENNLTVHVSALRKVFG----AQAVATIPGRGYRFVMALDETTGAPAVAPVPAPAPASVV 118 Query: 115 ----------TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT- 161 SIA+ P +L + L + + + L+ ++ Sbjct: 119 GADGPTGLTLPDRPSIAVLPLDNLSGDAQQDLLIEGLSEDVITELSRFRSLFVIARNSSF 178 Query: 162 ---NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--V 216 + + Y + G + + + ++L+DA + + + V Sbjct: 179 SFRGLAHGERDVRAIARELGVRYVLEGSLRRAGDRVRVAVQLVDAVSATQLWAEKYDRAV 238 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY-KNHYLSDEMLAGKKELYDFTPESIY 275 D+L + + I+ + + K ++ + + E Sbjct: 239 DDLFALQEELTRAIVGAIAPQIEAGEFQKIRSARGRDLNAYTLAMRARDTARRADREGDA 298 Query: 276 RAM-TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT 334 +I +A G + + A A + Sbjct: 299 TTRDEALRLAHEAVEIDPGCGVALATIAFVQWQQIWAGSAASPVDAAVAGLAAARRAIAL 358 Query: 335 TV-DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE--- 390 D ++ + Q ++A + + A Sbjct: 359 DGSDHHAHLWKAMLQLFTHQHAAGLADLQRAHELNPNDALTLSLLGQYLAAEADSAADAA 418 Query: 391 -ARICIDKSLQLEPRRR------KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 + +L+L PR ++ + + + + R+ Sbjct: 419 TGVRHVLDALRLSPRDPLRWSFLNSLAWASFAAFDHAGAVDAASRALGEAPQFPPARL 476 Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 27/284 (9%), Positives = 70/284 (24%), Gaps = 17/284 (5%) Query: 134 PLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAV 193 L + +V I+ + G + +A + + G + Sbjct: 245 QEELTRAIVGAIAPQIEAGEFQKIRSARGRDLNAYTLAMRARDTARRADREGDATTRDEA 304 Query: 194 NTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNH 253 L E ++ +A + Q + V + A++ Sbjct: 305 LRLAHEAVEIDPGCGVALATIA---FVQWQQIWAGSAASPVDAAVAGLAAARRAIALDGS 361 Query: 254 YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK 313 + +L+ + LQ ++ LL L + Sbjct: 362 DHHAHLWKAMLQLFTH------QHAAGLADLQRAHELNPNDALTLSLLG-----QYLAAE 410 Query: 314 SELELAAQKALELLDYVSDITTVDGKILAIM---GLITGLSGQAKVSHILFEQAKIHSTD 370 ++ A + + ++ D + + + + + +A + Sbjct: 411 ADSAADAATGVRHVLDALRLSPRDPLRWSFLNSLAWASFAAFDHAGAVDAASRALGEAPQ 470 Query: 371 IASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKEC 414 R + I+ AR + L P+ + + Sbjct: 471 FPPARLCRVIGQVGLGAIDAARADFETLRALAPQMVATRLAGDW 514 >UniRef50_C3KN58 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KN58_RHISN Length = 635 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 50/410 (12%), Positives = 126/410 (30%), Gaps = 21/410 (5%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETI--YRKGYRFSGQVFKTK-----INEDN 114 ++ VS + L FE +G + ++ I + +R+ Sbjct: 180 GSVYVSGAVHDQVRDRLELRFEDLGRQQ-VKNIDRPVRVWRWLRDAAAPDRGAVLQEASL 238 Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQN 171 SI + PF D + + + + K+ GL+ + + + + Sbjct: 239 PDRPSIIVLPFNNMSRDADQEYFSDGITEDVITDLSKVSGLFVIARNSAFVYKDKTFNVP 298 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDN 229 + + G I + + +LID + + + D ++ I Sbjct: 299 QVCRELGVKFALEGSIRKAGNRVRVTAQLIDGSSGGHVWAERYDRDLTDIFEVQDDITQQ 358 Query: 230 ILQTVHKPERSVRLAKQDQG-YKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I+ + + ++ + ++ D L G+ E+ + + Sbjct: 359 IVAALKVTLSAAEKSRSAEAGTRDVDAHDLFLRGR-EMLRAVKKDRDMFEQATACFRQAL 417 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + L ++ + S E + A D D ++ L+ Sbjct: 418 ALDPNYAAPCAGLGLAYVLDYQNHWSAAPETSLDAAERFADEAIGKDDQDPFNHFVVSLV 477 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + ++A + + AS R ++H + + + A I+++++L+P ++ Sbjct: 478 AMFRRNYRRWGESADRALALNPNFASALNMRGVLHLYTGEPKLAIPDIERAMRLDPAVQQ 537 Query: 408 AVVIKECVDMYVPNPLKNNIKLYY-----KETESESHRVIIDNILKLKQL 452 + +V + L+ T S + + L +L Sbjct: 538 QYLHFLGTAYFVDGDYEKAATLFRDRIEVNPTTDLSRAFLASALGHLGRL 587 >UniRef50_A6UAU6 Tetratricopeptide TPR_2 repeat protein n=3 Tax=Rhizobiaceae RepID=A6UAU6_SINMW Length = 626 Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats. Identities = 61/412 (14%), Positives = 123/412 (29%), Gaps = 26/412 (6%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQV---------FKTKINE 112 I VS + + L +G I + + Q K Sbjct: 164 GGICVSQQVYDQVSSKLDIQMGDLGCKTF-ADIPGPLHVWCWQPGATREESPAPKQNRPR 222 Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHIS 169 + SIA+ PF + + + + + + + L ++ F + Sbjct: 223 PDMKRPSIAVLPFVNLSSVDEQEHFSDGFTEELISTLARCRWLRVVARNSSFTFKGVTVD 282 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFII 227 S Y + G I + + +L+ + L+ + +D++ I Sbjct: 283 VRKVASDLGVKYVIEGSIRRAANRIRITAQLLSGETGMLLWAERYDRMLDDVFVLQDEIA 342 Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I TV + A + L G LY F E++ + +F+R Sbjct: 343 GQITGTVEPELGFIEFAALRGQSATDMDAWNIYLKGLWHLYKFDLENLRISKELFER--- 399 Query: 287 KSDIQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTVDGKILAIMG 345 D++ + Y LA H+ L +G E A L + + + + +G Sbjct: 400 AIDLEPAFAQAYARLAYVHIQLGWYGPLEERGDRIADATALAERATALDDREPAAHLALG 459 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 L GQ + A A ++ + + EE I+++ +L PR Sbjct: 460 RARALGGQPERGIEHLRNALRLVPSFAQGHFALGQALCYVGRPEEGITAINEAFRLSPRD 519 Query: 406 RKAVVIK--ECVDMYVPNPLKNNIKL----YYKETESESHRVIIDNILKLKQ 451 + Y + KE + +++ L ++ Sbjct: 520 PHLWTFHNMVAIAQYQAGRFAQAAEAARASLLKENATFWPAMVLAASLGAQE 571 >UniRef50_Q89CY1 Bll7664 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CY1_BRAJA Length = 580 Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats. Identities = 55/411 (13%), Positives = 133/411 (32%), Gaps = 24/411 (5%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRC------IETIYRKGYRFSGQVFKTKINEDNT 115 I++S++ + L FE G + + + S + Sbjct: 128 GGILMSEKVYSEVEGKLDVGFEDRGEQQLKNIAKPVRAYAVRAGASSALTERLSAAPPLP 187 Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNS 172 + SIA+ PF + +V+ I + + L+ ++ + ++ Sbjct: 188 AKPSIAVLPFENMSGDPEQEYFADGMVEEITTALSRFKWLFVIARNSSFTYKGKAVNVKQ 247 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNI 230 Y + G + + + +LIDA I ++ D ++ + + Sbjct: 248 VGHELGVRYILEGSVRKAAGKVRIAGQLIDAITGTHIWADRFERDLTDIFALQDDVALAV 307 Query: 231 LQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + V +A + + D L ++ Y T ES+ A+ + + Sbjct: 308 VSAVQPKMLQTEIATAARRRPENLTAYDFFLRSMQQYYLTTRESLAEAIKL---AHRALE 364 Query: 290 IQTLKTECYCLLAECHMSLALHG-KSELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 + + L +CH S G + E A++A+ L + D L+ + +++ Sbjct: 365 LDPRFSSAAALAGDCHASNVALGYANNPEFDAKEAIRLARLALSLDDGDPDTLSRVAVVS 424 Query: 349 GL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 G ++ + ++A + + + R V+ EEA ++++++ P Sbjct: 425 ACVVGDSEAEIEMADRAVALNPNSWRTWNNRGWVYTMAGLPEEAIRSFERAIRMSPLDPL 484 Query: 408 AVVIKECV--DMYVPNPLKNNI-----KLYYKETESESHRVIIDNILKLKQ 451 + + + I L + + R + L + Sbjct: 485 LHMTFLGIGHALVGLRRFDEAIIVLKKALRQNPSFMPACRGLASAFAHLGR 535 >UniRef50_D0CVN3 Adenylate cyclase protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVN3_9RHOB Length = 626 Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats. Identities = 50/355 (14%), Positives = 113/355 (31%), Gaps = 14/355 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFC 164 T SIA+ F + L+ + I + + + +T F Sbjct: 224 DHAAVPMTGKPSIAVLAFDNLNRDPEHDYLSDSFSENITTALSRFVDFFVIARDSTLGFK 283 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNT 222 + + Y + G + + +LIDA + + ++ D + + Sbjct: 284 DQPVGIQQVAEELGVRYVLDGSVQVAGDRLRVTAQLIDATSGKTLWADSYDRDLQDFFSV 343 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIF 281 + I T+++ + + ++ + +++ + FT E RAM + Sbjct: 344 QDEVTRTIALTLNENIDLAEYDRLEHKPTDNLNAYELFKRAQEQAFTFTKEGNIRAMRL- 402 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE---LELAAQKALELLDYVSDITTVDG 338 + + Y LA H G +E E A A E + + Sbjct: 403 --SEKAIALDPNFAGAYIELAWAHNFGYRWGWTEKTSREEALTLAFEAARKAIKLEPFNF 460 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 K ++ IT SG + + ++++A + + A + + + EA + + Sbjct: 461 KAHQVLASITAHSGDLEKAAAIYDKAISLNPNSAQVLADSIDPLVYGGRAAEAVDRMQTA 520 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE--SESHRVIIDNILKLKQ 451 ++L P + Y + + K R + +L+L + Sbjct: 521 IRLNPHHPDWYLWNLGWAQYFAEDYEGALASIEKMNSVPDRLRRTLAPILLRLGR 575 >UniRef50_Q98LH2 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98LH2_RHILO Length = 581 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 53/409 (12%), Positives = 132/409 (32%), Gaps = 22/409 (5%) Query: 62 KNIIVSDESLTRCIY-SLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDN------ 114 +V S+ + L F +G D ++ I + + Sbjct: 130 PGGVVIGRSVYDQVSGKLPYEFIDLG-DHTMKNIAGAVRAYRVGTGEQAQEGPVAIASAN 188 Query: 115 ----TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDH 167 S+A+ PF + + + + + + L+ ++ F Sbjct: 189 DLPLPFKPSVAVLPFANMSADPEQEYFSDGITEDLITELSRSQSLFVIARNSSFVFKGRS 248 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQF 225 ++ + Y V G + + A + +LI+A + + + D+L Sbjct: 249 VNTTEVGRKLGVRYVVEGSVRKAGARVRITAQLIEASSGNHVWAERYDRSIDDLFAVQDE 308 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQ 285 + + I + + +A+ Q + D L G + + FT + A+ F + Sbjct: 309 VTERIAWALVGKVGTAEIARARQTKTSLGAYDAFLRGMEAAHRFTEDDTIAAIEFF---K 365 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 Q + LA+ + +L+ A A++ ++ G A++ Sbjct: 366 LALRGQPDSARGHACLADAYATLSAFRADGGLKAL--AMQSALRAIELGDASGLAEAVVA 423 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 + G + + ++A + A + + + ++ AR ++ +L P Sbjct: 424 ALYAWKGDFEAAETHGQRALVLGPTNALALNWVGYISLWDGQLARAREIGERLQRLNPLE 483 Query: 406 RKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTR 454 + + Y+ + +++ + + + R + L QL R Sbjct: 484 DRDIHELLAFTHYLLGDYEASLRSFRRWDNNNYDRGFANLAACLGQLGR 532 >UniRef50_A3W697 Transcriptional regulatory protein-like n=3 Tax=Rhodobacteraceae RepID=A3W697_9RHOB Length = 478 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 53/436 (12%), Positives = 132/436 (30%), Gaps = 31/436 (7%) Query: 31 YIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRC 90 + +E + + G I + + ++ ++ + ++ Sbjct: 7 PLSPRERQIAKAFAD--GE--TYQQIADRL----NLAPSTVRTHLATIYRKLGVSTKLDL 58 Query: 91 IETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNK 148 RK SIA+ F + + + I + Sbjct: 59 -----RKRIEDVSPADPAPDLPPRPDKPSIAVLAFENMSDDPGQEYFSDAITADIITALS 113 Query: 149 KIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLF 207 + L+ T + + + + + + G + + + +LID Sbjct: 114 RSPWLFIIARNTTFTYKGESVDIRRVSTELGVRFVLEGSVRRAGERVRVTAQLIDGLTGG 173 Query: 208 LIASNHLP--VDELHNTSQFIIDNILQTVHKPE--RSVRLAKQDQGYKNHYLSDEMLAGK 263 + S ++++ + I ++ V +V + + + + + Sbjct: 174 HVWSERYDGRIEDVFDLQDEITRQVVAQVQTIVHRSTVEAPVERLNRPDLTVWELTMRSW 233 Query: 264 KELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL-AAQK 322 LYDFTPE+ A T+ +R I E +L+ + +AL G +E A + Sbjct: 234 HLLYDFTPEAYASAKTLLER---ALAIDPESAESNMVLSLINHHIALMGFAEDPGPAMEA 290 Query: 323 ALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH 382 A L + + + +G+ + E+A + + + Y Sbjct: 291 AYALARRATRLDDRNEYAHWALGISCWGLHRLDEGIAALERAVELNPNCSVAYGSLGTAL 350 Query: 383 FHNEKIEEARICIDKSLQLEPRRRKAVVIK--ECVDMYVPNPLKNNI-----KLYYKETE 435 + EEA + ++++ PR + Y I ++ Sbjct: 351 AIAGRAEEAIANQEVAIRMNPRDPSIFFRFSGLALAHYTAGDFDAAILWAERAIHRMPRW 410 Query: 436 SESHRVIIDNILKLKQ 451 +H +++ + + L + Sbjct: 411 YLAHFLLVASHVALGR 426 >UniRef50_A1TS46 Transcriptional regulator domain protein n=2 Tax=Acidovorax RepID=A1TS46_ACIAC Length = 531 Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats. Identities = 66/442 (14%), Positives = 128/442 (28%), Gaps = 24/442 (5%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + F + + L V + + VL L+ AG +V K + VW ++V + Sbjct: 26 FAFDHFVLKVRERQLLSHGCPVALGARAFDVLCTLVHRAGTLVTKSELFRQVWPGMVVEE 85 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +L + +LR + I TI +GYRF G+V + + S Sbjct: 86 NNLQVHVSALRKLVG----ADRIVTIPGQGYRFVGRVAGPPEPGQEAARAPLPDASTGRS 141 Query: 129 --------LNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 L + + + + AT + + S S Sbjct: 142 IAVLPFGAAPDAAQRHFADGLAEDVIHRLSRSRWISVIARNATQRYGHPLPSNASIAREL 201 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVH 235 Y V G+ + + +LIDA + + P D+ I I V Sbjct: 202 GVRYLVAGQARFHAGRVRVTADLIDAPRNETVWTESYERPADDAARAQSSISAAIASAVE 261 Query: 236 KPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 ++ + + + + +A + + Sbjct: 262 PVHLRREECLHSAVPPQDGEYWPLLMRARWHFWRSGRDHLRQAE---HYARRALQARPDD 318 Query: 295 TECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 LLA HM+ G+S + + A +A L D +G SG Sbjct: 319 ASSLALLAFVHMARVWAGRSACVRVDASEARRLALRAVGSDDTDAFAHFTLGTALSFSGH 378 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI-- 411 V+ A A+ A + + + +EA ++ + P + + Sbjct: 379 FAVAMSEQALALSICPRFAAATGELARLLAFSGRTDEADDHARQACEASPLDPQMSLWIR 438 Query: 412 KECVDMYVPNPLKNNIKLYYKE 433 + +V + + Sbjct: 439 TRAIARFVEGDYRGAESFALQA 460 Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 40/135 (29%), Gaps = 7/135 (5%) Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 A+ + ++ I LA LA G+++ + S + Sbjct: 380 AVAMSEQAL-ALSICPRFAAATGELAR---LLAFSGRTDEADDHAR---QACEASPLDPQ 432 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 + + + G + + QA D +Y A + R ++ Sbjct: 433 MSLWIRTRAIARFVEGDYRGAESFALQALAQRPDWLFNHYLLAACQAAAGHGADGRRTLE 492 Query: 397 KSLQLEPRRRKAVVI 411 ++ + P +A+ Sbjct: 493 QARRFGPYPAEALRA 507 >UniRef50_B9NM62 Adenylate cyclase Cya3 n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NM62_9RHOB Length = 613 Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 102/322 (31%), Gaps = 10/322 (3%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPD 180 PF + D + + I + K+ L +T + + D Sbjct: 230 PFNNLSSDPDQEFFADGITEEIITTLSKLPSLLVVARNSTFVYKGRSVDVKQVGLEQGVD 289 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTVHKPE 238 + G + Q+ + +LIDAK+ I ++ +++ I I + Sbjct: 290 LVLEGSVRQSGNRVRITAQLIDAKSGMHIWADRYDRLIEDVFEVQDEIALRIATELQVEL 349 Query: 239 RSVRLAKQD-QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 + +A+ G KN L + T E+ A Q + + Sbjct: 350 LAGEMARFRGSGTKNLSAWTAQLQAVEASRKITKEAHTDARRF---AQQAIALDPGYSAP 406 Query: 298 YCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 +C L A HG A +A + +I + + + AI G + G+ Sbjct: 407 HCTLGFICTVEARHGFVADRRATLAEARDCAQRALEIDSYNPEAHAIAGFADAIDGKLVS 466 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 + F +A + + A + +L N + EA +++ L P + Sbjct: 467 AIEKFNEALALNPNHADVAARLSLTLGFNGQAREAIRVAQQAITLNPHYPGWYAGVLGLA 526 Query: 417 MYVPNPLKNNIKLYYKETESES 438 + + + K + + + Sbjct: 527 LRLDGQYEEAKKAFTEYGQRVE 548 Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 72/260 (27%), Gaps = 41/260 (15%) Query: 170 QNSFLSRFKPDYF------VTGRINQNNAVNTLYIELIDAKN----LFLIASNHLPVDEL 219 + + + G +N + T ++ ++A + + Sbjct: 338 ALRIATELQVELLAGEMARFRGSGTKNLSAWTAQLQAVEASRKITKEAHTDARRFAQQAI 397 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA-- 277 + + + D+ D E+ + PE+ A Sbjct: 398 ALDPGYSAPHCTLGFICTVEARHGFVADRRATLAEARDCAQRAL-EIDSYNPEAHAIAGF 456 Query: 278 --------MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 ++ ++ + + L+ L +G A++A+ + Sbjct: 457 ADAIDGKLVSAIEKFNEALALNPNHADVAARLSLT---LGFNG------QAREAIRVAQQ 507 Query: 330 VSDITTVDGKILA-IMGLITGLSGQAKVSHILF----EQAKIHSTDIASLYYYRALVHFH 384 + A ++GL L GQ + + F ++ + +VH Sbjct: 508 AITLNPHYPGWYAGVLGLALRLDGQYEEAKKAFTEYGQRV------EGFGHLDLVIVHVE 561 Query: 385 NEKIEEARICIDKSLQLEPR 404 E ++ AR ++ P+ Sbjct: 562 TENLDAARDEARNVMKFRPQ 581 >UniRef50_B5ZU37 Adenylate/guanylate cyclase with TPR repeats n=8 Tax=Rhizobiales RepID=B5ZU37_RHILW Length = 568 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 50/393 (12%), Positives = 115/393 (29%), Gaps = 15/393 (3%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 I +S + + F G R ++ + R + + + SIA Sbjct: 131 GGICISAGVHDEIVGKIGDRFFDAGE-RYLKNLTRPVHVWHWPDA-LESILPLPDCPSIA 188 Query: 122 IFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFK 178 + PFT L + + + GL+ + + ++ Sbjct: 189 VLPFTNMSGNEADAPFVDGLTEDLITDLSRTAGLFVIARHSVYGYKGKPVNVKLVAQELG 248 Query: 179 PDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHK 236 Y + G + + +L+D + + + ++ + + I++ + Sbjct: 249 VRYVLEGSARRAMGRVRINAQLVDTADGGHLWAERFDRTLENVFELQDEVNAKIVEAL-- 306 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + + N D + + T ES + LQ ++ E Sbjct: 307 -VGRLTIPTPRNRPTNFEAYDLCVRARLL----TEESPQTEREAYMLLQRAVKLEPSYAE 361 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 LLA H + + A ++ D ++G I + + Sbjct: 362 ALGLLAYNRWLAWTHFGEPEDPNREMATTSAQKAVELDPNDAGCRYVLGTILAYERRWEE 421 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 S F +A + A + + + + ++ + I+K+L+L PR + Sbjct: 422 SEAAFAKALELDPNHADTWAAMSDISVLDGRVADGLAQIEKALRLNPRPACWYLCHLGQA 481 Query: 417 MYVPNPLKNNIKLYYKETES-ESHRVIIDNILK 448 Y + +E + R + L Sbjct: 482 QYAARDYEAAAATLRREDTYRTNSRKFLAATLA 514 >UniRef50_A6UDI5 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 Tax=Alphaproteobacteria RepID=A6UDI5_SINMW Length = 588 Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats. Identities = 55/381 (14%), Positives = 120/381 (31%), Gaps = 18/381 (4%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS-------GQVFKTKINEDN 114 I V+ + L E +G + ++ I R + F +T + Sbjct: 128 GGICVTAAVAMQVADRLEVSIEDLGE-KMLKNISRPIHLFRVALEGTLPVFPETADAGRS 186 Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQN 171 S +I + PF D L + I + L+ ++ + N ++ Sbjct: 187 VSKPAIVVLPFDNMSGDPDQEFFADGLTEDIITELSRRHELFVISRNSSFVYKNQPVNVR 246 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDN 229 + Y V G + + + ++LIDA N I ++ +D++ + Sbjct: 247 EVAEKLGAQYLVEGSVRKIGDRVRVTVQLIDAVNDAHIWADKYDRRLDDIFAIQDEVTSA 306 Query: 230 ILQTVHKPERSVRLAKQDQGYKNH-YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I T+ + + + + + LA K + T +A + DR Sbjct: 307 IAATLPGRVEAAQRDLLARTKPANMAAYECALAAKVLHHRSTVADNRQARALIDR---AV 363 Query: 289 DIQTLKTECYCLLAECHMSLALHGK-SELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + + A +HG + + A + + LD + D + I+ + Sbjct: 364 ALDPGYAHAHAWRACILGQAWVHGWCDDKDAAWAEIVSELDRALALDDNDADVHRILAAV 423 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + + E+A + + + + + + EE I K++QL P Sbjct: 424 NVNNNALTTARYHQERALSLNPNYDLVVVQQGELLMWLGRPEEGIEWIRKAMQLNPHHPV 483 Query: 408 AVVIKECVDMYVPNPLKNNIK 428 + +I+ Sbjct: 484 RFWSHLGKACFSARQYGESIE 504 >UniRef50_Q1ISH8 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISH8_ACIBL Length = 619 Score = 223 bits (569), Expect = 8e-57, Method: Composition-based stats. Identities = 61/434 (14%), Positives = 135/434 (31%), Gaps = 27/434 (6%) Query: 12 LEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK-NIIVS-DE 69 E L + +V + +K + +L+ L+ +V ++ II +W+ ++ + + Sbjct: 38 AEFELDLGRYELRRSGSRVKLEKKPMELLMFLVSRREQMVTREEIIRKIWRTDLFIDAER 97 Query: 70 SLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDN---------TSDYS 119 +L + +R R +ET+ GYRF G + + + S Sbjct: 98 NLNNIVRKIRTALGDDPDRPRFLETVVGVGYRFIGPMRVVEAQFPRAETLDIPIDETSRS 157 Query: 120 IAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHISQNSFLSRF 177 IA+ P + D + ++ K+ G+ P +AT + +S ++ Sbjct: 158 IAVLPLVMAGKANDDEGVGIGFADALAAQLGKLQGVVVLPSSATIHFSAAVSPKEVAAKL 217 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVH 235 + V G I L +E++DA + + S +D + + + + Sbjct: 218 ATRFVVHGAIRLQKGEWRLSVEMLDAHSGRVCFSKSFDTSLDRFAQVEGEVAREVARALK 277 Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 P + + + +N E + G K P + RA Sbjct: 278 LPLNAPQQR--PRHSRNPLAYAEFMRGYKLSGSGDPAEVARASQHLG---TAVARDPNFA 332 Query: 296 ECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG---LSG 352 + L+ +KA ++ + L + + Sbjct: 333 LAHATLSFVFAVQHF-ESDPTSALLEKAEFHGSRALELDPELPEALVARAFLVWGPSKNF 391 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 Q + ++A ++ Y + H ++ A ++ P+R AV Sbjct: 392 QHLEAITDLKRALSLQKNLPHAYNRLGTILAHVGLLDHALEMFERGRPFHPKR--AVSPS 449 Query: 413 ECVDMYVPNPLKNN 426 + Sbjct: 450 VVQVYGWKGEFERA 463 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 48/189 (25%), Gaps = 28/189 (14%) Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSDEML-AGKKELYDFTPESIYRAMT------- 279 + I L +L + P RA++ Sbjct: 395 EAITDLKRALSLQKNLPHAYNRLGTILAHVGLLDHALEMFERGRPFHPKRAVSPSVVQVY 454 Query: 280 ----IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL----AAQKALELLDYVS 331 F+R E + + A + ++ Sbjct: 455 GWKGEFERAAEVIA---------AWREESPNNKYALHWAPFPAMMTGDWDAASQCMEESL 505 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR---ALVHFHNEKI 388 D ++++ GL+ G+A+ + +A + ++ A +H + Sbjct: 506 AAAPHDPLMISMQGLLHARMGKAEAAMDCVMKACSYPQSFGHAHHSYYQIACIHALVGRP 565 Query: 389 EEARICIDK 397 E A +++ Sbjct: 566 ETAFAWLER 574 >UniRef50_Q9Z3Q0 Putative adenylate cyclase 3 n=1 Tax=Sinorhizobium meliloti RepID=CYA3_RHIME Length = 587 Score = 223 bits (567), Expect = 2e-56, Method: Composition-based stats. Identities = 46/412 (11%), Positives = 129/412 (31%), Gaps = 28/412 (6%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKT---------KINE 112 + +SD F GY ++ I R + ++ + Sbjct: 133 GGVAISDGIHEYVHGRTDIDFVDSGY-HEVKNIERPVHIWTWSPKDRAREPPNIAAEPPP 191 Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHIS 169 + SIA+ PF + + + I K+ GL+ ++ + Sbjct: 192 QLPAKPSIAVLPFDNMSGDPEQGYFADGITEDIITDLSKVSGLFVIARNSSFAYKGKTPD 251 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFII 227 Y + G + + + ++ID + + ++++ + Sbjct: 252 IRKVSRELGVRYVLEGSVRRAANRIRINAQMIDGTTGGHLWAERYDRGLEDIFAVQDEVT 311 Query: 228 DNILQTVHKPERSVRLAKQD-QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I+ + + +++ +G + D ++ ++ + F S A + R+ Sbjct: 312 RTIVNALRVKLTAGEEERRESRGKVDPEAYDLLVRSRQAILQFNALSSMEARRMLHRV-- 369 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILAIMG 345 +I + L+ ++ ++ + +AL L D + + + Sbjct: 370 -LEIDPGMAAAHASLSIIALTDFINQWNGATPDNLTQALGLAQEAIDTDGSEPQGHYTLA 428 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 L + + E+A + A+ Y + + EEA ++ +L+P Sbjct: 429 LALSWMRRLDEAEHAAERAIELDPNSANAYTALGTIRDFQGRHEEALALYTRAHRLDP-- 486 Query: 406 RKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRICM 457 + + ++ N+ + + + R+++ + + C+ Sbjct: 487 ------QFDLSLHFQGRALLNLGRFDEAEVAFKRRLLLAPRSDMTRFYLACL 532 >UniRef50_A6UCV6 Adenylyl cyclase class-3/4/guanylyl cyclase n=15 Tax=Rhizobiales RepID=A6UCV6_SINMW Length = 634 Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats. Identities = 53/418 (12%), Positives = 115/418 (27%), Gaps = 30/418 (7%) Query: 62 KNIIVSDESLTRCI-YSLRCIFEKIGY---DRCIETIYRKGYRFSGQVFKTKINE----D 113 + I S+ + L F G TI D Sbjct: 138 PSGIAVSASVRDHVGSRLDVGFVDKGEYSLKNIAPTIRVYTVSLGAHPVAKGSEPAGVVD 197 Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQ 170 + SIA+ PFT + + + + + + K+ L+ + + Sbjct: 198 RGYELSIAVLPFTNMSHDPEQEYFSDGITEDVITDLSKVARLHVVARNTVFTYKGKAVKV 257 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIID 228 + + G + + + +LIDA+ + ++ D ++ I Sbjct: 258 KQIAHELGVRFILEGSVRKAGERVRITGQLIDAQTGGHLWADRYDRDLTDIFAIQDEITH 317 Query: 229 NILQTVHKPERSVRLAKQDQGYKNH-YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 I+ + + L G++ + +T + A +F Sbjct: 318 AIVNQLKIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTKPYLLLARRMF---LKA 374 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 ++ Y +AEC A+ E E + L++ + + A GL Sbjct: 375 VELDPNYARAYAGIAECE--CAIRDWHEKEFPLKSILDMSAKALALDPNLAEAHASRGLA 432 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL------ 401 GQ + + F QA + Y F + +EA +++ ++ Sbjct: 433 LNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFFERAAEIRSDDYF 492 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNI-----KLYYKETESESHRVIIDNILKLKQLTR 454 P + + + I L + + + + R Sbjct: 493 SPIHLMGCHLSLGREAERQRWARIGIERATRALERNPENASPAHRGALALAHMGEAER 550 Score = 66.3 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/231 (12%), Positives = 63/231 (27%), Gaps = 16/231 (6%) Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH-LPVDELHNTSQ-------FIID 228 + + Y + + + P+ + + S + + Sbjct: 365 LLARRMFLKAVELDPNYARAYAGIAECECAIRDWHEKEFPLKSILDMSAKALALDPNLAE 424 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYD---FTPESIYRAMTIFDRLQ 285 + + + ++ D L Y F A+ F+R Sbjct: 425 AHASRGLALNHDGQTEEASREFRQALALDPSLYEANLYYGRFLFAQGRFQEAIGFFERAA 484 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + + L CH+SL ++E + A+ +E + + Sbjct: 485 E-IRSDDYFSPIH--LMGCHLSLG--REAERQRWARIGIERATRALERNPENASPAHRGA 539 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 L G+A+ + +A D Y A V+ + E A ++ Sbjct: 540 LALAHMGEAERAKEWVSRALATDPDDVVAQYNAACVYALLGEGERALELLE 590 >UniRef50_A1B7Q0 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B7Q0_PARDP Length = 596 Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats. Identities = 61/400 (15%), Positives = 125/400 (31%), Gaps = 14/400 (3%) Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCI---ETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 IV D R + I I + + D S+ Sbjct: 153 RIVRDNPELVLRSLGRRRLKNISAPVEIYAAAPASPAAAAAVPLRAVPRRVDPGLPDTSL 212 Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLSRF 177 AI P L +V + + + L ++ S R Sbjct: 213 AILPMENLSADPGDQHLCHGIVADLITNLCRFRHLLVIARHSSFLAAAQTSSLREIGRRL 272 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVH 235 Y +T + + +EL++A++ I S ++ + + V Sbjct: 273 GVRYLMTSSFRRAGNRLRITVELVEAESENTIWSERYDGVMLDIFDFQDDVTAMTAARVA 332 Query: 236 KPERSVRLAK-QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 + + +Q + Y +L G+ F P++ A +F+ ++ + Sbjct: 333 IQLDANERRRLAEQSHPALYAYGLVLRGQDMGLRFLPDANLHARRLFEEARD---LDPDY 389 Query: 295 TECYCLLAECHMSLALHGK-SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 Y ++ + S + A +AL L +D + + MGL Q Sbjct: 390 GRSYAAMSRTFNVEWRYNWTSNPDAALNQALVLAKRAVQCDALDSRGFSEMGLAHLYKKQ 449 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + +E A + + A L Y + + E A ++++++L P A + Sbjct: 450 HDEALAAYEHALALNPNDADLLAYTGDCLAYVRQGERAVQLLERAMRLNPYFPDAYLWFL 509 Query: 414 CVDMYVPNPLKNNIK-LYYKETESESHRVIIDNILKLKQL 452 + I+ L +SE+HR++ + L Q+ Sbjct: 510 GDAYFHHGDYGKTIETLSRMRDQSEAHRLLAASHALLGQM 549 >UniRef50_Q01WH4 Transcriptional regulator, CadC n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01WH4_SOLUE Length = 616 Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats. Identities = 64/447 (14%), Positives = 143/447 (31%), Gaps = 29/447 (6%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 +Y F L + +L +G++ + +P K L++L+ + GH++ K +++++W + Sbjct: 21 GEPQAYGFGPFRVLPCERVLRRGDQTLPLPPKAFETLLLLVRNPGHLMRKGEMMKALWPD 80 Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTK------------I 110 V + +L I +R D I+T+ + GYRF V Sbjct: 81 SFVEEVNLANNISLVRKTLGDSAGDCGYIQTVPKLGYRFLPAVTGVWGKGPPTADSARLE 140 Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAAT----NFCND 166 + PF L L + L + IS + GL + ++ F Sbjct: 141 RQPAERVVRFLALPFRMLLGDERIDFLGRSLPEAISA-SLAGLSCMTVRSSLLAAQFSES 199 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQ 224 + D + G I + + EL+ A L+ S D + Sbjct: 200 RPDPRRIAREAEVDLVLAGTILCEHDQVRVNTELVQAPTGTLLFSYSCEAKRDNIFEIQD 259 Query: 225 FIIDNILQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 ++D I++ + + R + + + L + + E++ A ++ Sbjct: 260 ILVDKIVEALMLRLTERERRTLKHDVPGSARAYEFYLRANHVARERSVENLALARDLY-- 317 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + D + L C+ L G + + + A + + Sbjct: 318 -RECVDEDPNYAPAWARLGRCYRFLEKFG-EDGPQSLELAQWAFHRAFALNPDLSIAHNL 375 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 I G A+ + + + + L+ ++E+ ++ +L+ Sbjct: 376 YTQIEADLGDAQGAMVRLLEHSETHPNDPELFAGLVQACRFCGLLDESVSAHHRARRLD- 434 Query: 404 RRRKAVVIKECVDMYVPNPLKNNIKLY 430 V ++ + Y Sbjct: 435 ---SKAVTSVAHTFFLKGDYARALDTY 458 >UniRef50_C3MIJ5 Adenylate cyclase 3 n=7 Tax=Rhizobium RepID=C3MIJ5_RHISN Length = 635 Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats. Identities = 54/394 (13%), Positives = 122/394 (30%), Gaps = 21/394 (5%) Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRC--------IETIYRKGYRFSGQVFKTKINEDN 114 I VS + L F G + T+ + + + Sbjct: 140 GIAVSSSVRDQVGSRLDLGFVDKGEYSLKNIAPNIRVYTVALGDAAARQEPEASDATLET 199 Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQN 171 + SI + PFT + + + + + I KI L+ + + Sbjct: 200 GYELSIGVLPFTNMSHDPEQEYFSDGITEDIITDLSKISRLHVVARNTVFTYKGKAVKVK 259 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDN 229 + + G + + + +LIDA + ++ D ++ I Sbjct: 260 QIAQELGVRFILEGSVRKVGERVRITGQLIDAHTGGHLWADRYDRDLTDIFAIQDEITHA 319 Query: 230 IL-QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I+ Q K + A + + L G++ + +T + A +F Sbjct: 320 IVDQLRIKLLPEEKKAIESDPTTSVEAYTYYLRGRQFSHTWTRPYLLLARRMF---LKAV 376 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 ++ Y +AEC A+ E + + ++ + + A GL Sbjct: 377 ELDANYARAYAGIAECE--CAIRDWHEKDFPLESIFDMSAKALALDPNLAEAHASRGLAL 434 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR--R 406 +GQ + + F QA S + Y F + +EA ++ ++ P Sbjct: 435 THNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKRAAEIRPDDYFS 494 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 ++ + + V + + ++ + ++ R Sbjct: 495 PIHLLNCYLSLGVDSERQRWARIGIERAKAALER 528 Score = 63.6 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/231 (11%), Positives = 61/231 (26%), Gaps = 16/231 (6%) Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN-HLPVDELHNTSQ-------FIID 228 + + Y + + + P++ + + S + + Sbjct: 366 LLARRMFLKAVELDANYARAYAGIAECECAIRDWHEKDFPLESIFDMSAKALALDPNLAE 425 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPES--IYRAMTIFDRLQ 285 + + + + ++ S + F A+ F R Sbjct: 426 AHASRGLALTHNGQTEEAGREFRQALALSPSLYEANLYYGRFLFAQGRFQEAVQFFKRAA 485 Query: 286 NKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 + + L C++SL + SE + A+ +E + + Sbjct: 486 EIRPDDY-FSPIH--LLNCYLSLGVD--SERQRWARIGIERAKAALERHPENASPAHRGA 540 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 L G+ + +A D Y A VH + E A ++ Sbjct: 541 LALAHLGEGDRAKEWAARALAIDPDDIVAQYNAACVHSLLGENERALDLLE 591 >UniRef50_B5ZNG5 Adenylate/guanylate cyclase with TPR repeats n=12 Tax=root RepID=B5ZNG5_RHILW Length = 598 Score = 218 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 44/349 (12%), Positives = 107/349 (30%), Gaps = 12/349 (3%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQN 171 SIA+ F + + + + I K+ L+ ++ + N S Sbjct: 198 PDKPSIAVLAFNNMSGDAEQEYFSDGISEDIITDLSKLSELHVIARNSSFVYKNVTASVP 257 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDN 229 Y + G + + + +LIDA N I ++ D ++ + Sbjct: 258 EMAKALGVRYVLEGSVRKAGNRVRVTAQLIDASNGGHIWASRYDRDLTDIFAVQDELTQE 317 Query: 230 ILQTVHKPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I+ + + QG + + +L G+++ A ++ + Sbjct: 318 IVTALKLNLTHGDQDRLAQGRAVDVSAYELLLRGREQASAHNRTGNRAARSL---AADAL 374 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAIMGLI 347 + L++ H+ ++ S+ + + L+L D+ +G+ Sbjct: 375 AVDPDYAAARALISFTHVLDYVNAWSDDPEGSLRTGLDLAQQAVDMAEEQPNSHFALGMA 434 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + + + + S + A L A + A +D S++L+P + Sbjct: 435 CMWNHELDRARAEVLRGLALSPNSAELLTLMAHIQIFAGDPAGALATLDASMRLDPHHPE 494 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK--LKQLTR 454 + + + I + + + +L L R Sbjct: 495 LLFQFLADARFSLGEYQQAIAAIEQRLQQNAQSETAYALLASCYGHLGR 543 >UniRef50_A0LHH5 Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LHH5_SYNFM Length = 631 Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats. Identities = 43/348 (12%), Positives = 101/348 (29%), Gaps = 11/348 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFC 164 ++ SIA+ PF L + + + ++ L+ + + Sbjct: 232 QRMAFPLPDKPSIAVMPFVNMTGEQSQDFFCDGLSESLIAALSRVPELFVIGRDSTFIYK 291 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNT 222 Y + G + + + +LIDA + S + ++ Sbjct: 292 GRAAPMRQVSEDLGVRYVLEGSVQRAGDRVRVTAQLIDALKGHHLWSERYDRNVKDIFEL 351 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDE-MLAGKKELYDFTPESIYRAMTIF 281 I IL + A+ N+ + +L G+ E+ A ++ Sbjct: 352 QDEISMKILTELRVKITEGEAARILPKGTNNLQAYLKVLEGEWYRNQNNKEANNVAKRLY 411 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKI 340 ++ Y LA G S + A++ ++ + Sbjct: 412 ---HEAVELDPAYAMAYVGLARAQGFDVWLGASKSPKETLADAMKSARKAIELDDSSAEA 468 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 A + + + + + E+A + + A+ Y +V + + EEA + ++++ Sbjct: 469 NAAASAVLVAMREHEKAIEVGERAVTLNPNSANALYTLGMVLNYAGRSEEALPLLRQAVR 528 Query: 401 LEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 P K + I V+ + +L Sbjct: 529 FNPVVPK-YYHHFSTACRETGRYEEGIAALKTSLGRVPDDVLANVVLA 575 Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats. Identities = 16/185 (8%), Positives = 50/185 (27%), Gaps = 15/185 (8%) Query: 214 LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES 273 + +D+ + +L + + E+++ + ++ + + G Y E Sbjct: 459 IELDDSSAEANAAASAVLVAMREHEKAIEVGERAVTLNPNSANALYTLGMVLNYAGRSEE 518 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 A+ + + + + H S A E L Sbjct: 519 ---ALPLLRQAVRFNPVVPKY--------YHHFSTACRETGRYEEGI----AALKTSLGR 563 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D ++ + +G+ + + + + + R K + Sbjct: 564 VPDDVLANVVLATLYVYAGREDEARAAVAEVRRIDPGFSLERFARGSPWKEGPKRDRFID 623 Query: 394 CIDKS 398 + ++ Sbjct: 624 ALRRA 628 >UniRef50_C6B2R4 Adenylate/guanylate cyclase with TPR repeats n=3 Tax=Rhizobium/Agrobacterium group RepID=C6B2R4_RHILS Length = 738 Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 39/326 (11%), Positives = 100/326 (30%), Gaps = 11/326 (3%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHIS 169 S+A+ PF + L + L + K+ GL+ + Sbjct: 227 PLPDRPSVAVLPFINVSGDSEHDHLAEGLTDDLITELSKVSGLFVIARHSVFAIQGSVGK 286 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFII 227 + Y + G + + + ++LIDA + + +L +I Sbjct: 287 IQDVAAELGVKYVLEGTLQRAGPRLRINVKLIDAVTGLSLWAERYDRQYADLFAVQDDVI 346 Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I+ + + + + + D + ++E + + Sbjct: 347 GKIISALSVKLSARERDQLARIPTENLEAYDYYMRAEQEGFILR--DVDTYRRTLSFYHK 404 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKS---ELELAAQKALELLDYVSDITTVDGKILAI 343 D+ + +A + + + + +A + A + + + + + Sbjct: 405 AIDLDPGFANAHAGIARVAVDVWRNDYNYLWSAAVARKIAYDAAGQALKLDPNNARAHTV 464 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + L+ + G+ + A + A AL+ H +A ++K+L+L+P Sbjct: 465 LALLQWVDGRETEAKNSANMAVAMEPNDAEAAANLALILVHTGSSGQAITEMEKALRLDP 524 Query: 404 RRRKAVVIKECVDMYVPNPLKNNIKL 429 + + + Y + I L Sbjct: 525 SPASSFQLLAGIVFYTAGDDQRAISL 550 >UniRef50_A1ZY11 Adenylate cyclase; Cya3 n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZY11_9SPHI Length = 579 Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats. Identities = 52/328 (15%), Positives = 117/328 (35%), Gaps = 12/328 (3%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQ 170 S S+A+ PFT +D + + + I ++ G+Y ++ +F ++ Sbjct: 1 MISPNSVAVLPFTNMSGHIDNEYFSDGITEEIINRLAQVQGIYVTARTSSFSFQGKNLDV 60 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIID 228 + Y + G + + + +L++ + F S + ++ I Sbjct: 61 RQIGKKLNVAYILEGSVRRAGNKVRIAAQLVNTQQGFHEFSEVYDRDLQDVLGVQDEIAL 120 Query: 229 NILQTVHKPERS--VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I + + +++ KN D L LY+ TP+ +A ++ ++ Sbjct: 121 LIANKLKDELINLPLKMPFTTSYPKNAQAYDWYLQANHILYNCTPQDFPKAEKLYQKI-- 178 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL-AIMG 345 ++I+ Y LA C + A + A KA ++ + + +G Sbjct: 179 -TEIEPDYAPAYSGLARCFLYYAAIQAFPPKEAFAKAKAYALKALELDSTLIDGHISYLG 237 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 + + + + A ++ A++ NE+ EEA + ++QL+P Sbjct: 238 CTFWQNWDIDTALLHINKTIQKIPGSAEIHAGHAMLLLVNERFEEALASMKLAIQLDPFS 297 Query: 406 RKAVVIKECVDMYVPNPLKNNIKLYYKE 433 V + V Y I +++E Sbjct: 298 PH-VRHRAGVAYYCMERYHEAIAEFFQE 324 Score = 55.9 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 18/170 (10%), Positives = 44/170 (25%), Gaps = 14/170 (8%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 I A+ ++ K E + A + + ++AL + Sbjct: 245 DIDTALLHINKTIQKI---PGSAEIHAGHAMLLL---------VNERFEEALASMKLAIQ 292 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + + G+ + + F Q + + A + +EA Sbjct: 293 LDPFSPHVRHRAGVAYYCMERYHEAIAEFFQELDIAGRN-DTQFKIAWCKIFLGQYDEAL 351 Query: 393 ICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVI 442 ++ + + P + A + + K E + I Sbjct: 352 EILN-ATEEHPHQIIAHDTAKGYLYAQAGNVAQAKFWLDKALEKIHRKEI 400 >UniRef50_Q1MES5 Putative adenylate cyclase n=4 Tax=Rhizobium RepID=Q1MES5_RHIL3 Length = 670 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 41/357 (11%), Positives = 107/357 (29%), Gaps = 20/357 (5%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQN 171 S+A+ PF + +V+ I + + LY ++ + + Sbjct: 270 HDRPSVAVLPFQNLSGDAEQEYFADGIVEDITIALAQFRHLYVIARNSSFTYKGQAVDIK 329 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDN 229 Y V G + + + +LID + ++ + + + + + Sbjct: 330 QVGRELDVRYVVEGSVRRTGDRLRIAGQLIDTSTGTHLWADRFDGTLANVFDLQDQVASS 389 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYD--FTPESIYRAMTIFDRLQN 286 I+ + + + + D L G I A+ +F + Sbjct: 390 IVGAITPKVEEAEIERAKRKPTESLDAYDYYLRGLAAFDRTVTNRSVIDEALRLF---RE 446 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILA-IM 344 + + A C+ + +G +A L ++ D L Sbjct: 447 AIERDPEFAVAHARAARCYATRKSNGWMLNPADETAEATRLARRAVELGWDDAVALTYGG 506 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 +I + G S ++A + ++A+ + V + ++A +++L P Sbjct: 507 YVIGYVGGDLDDSAACIDRAVSLNPNLAAALGVSSWVKVCLGEPDKAIEHATLAMRLSPL 566 Query: 405 RRKAVVIK--ECVDMYVPNPLKNNI-----KLYYKETESESHRVIIDNILKLKQLTR 454 + + + + + L ++ + RV+ + +L + Sbjct: 567 DPRLFAWQFNIGLAHFCAGHYDDAAVWAGKSLRHQLNYPSAMRVMAASQAMAGRLAQ 623 >UniRef50_Q022A1 Transcriptional regulator domain protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022A1_SOLUE Length = 605 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 46/334 (13%), Positives = 103/334 (30%), Gaps = 10/334 (2%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT-NFCNDHISQ 170 +IA+ P + + ++ +I L A+ + Sbjct: 146 EPHIGAIAVLPLENLSGDPAEEYFADGMTEALTADMAQIGALRVIARASVMQYKGTKQPL 205 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIID 228 R + V+G + ++ + LI A + + + ++ + + Sbjct: 206 AQIAERLHVEAVVSGAVLRSGQRVRITAALIRAATGQQLWARTYERSLGDVLDLQNEVAR 265 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 I V + + + D L G+ FT + +++ F+R Sbjct: 266 AIAAEVQAKLTAQEQIRLARSRPVKADAYDAYLKGRYYYNQFTVDGFSKSIEHFER---A 322 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + Y LA+ SL G + E +ALE + + + A M + Sbjct: 323 IKLDPNYASAYAGLADALASLEQIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASV 382 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + + ++A + A + Y + + H + EE+ ++L+L+P Sbjct: 383 RANDWERSAAEREAKKAIELNPGFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPL 442 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 + I+ Y K E ++ Sbjct: 443 TNE-ELADAQLSARQYGAAIEQYQKTLELYPNQP 475 Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats. Identities = 21/236 (8%), Positives = 54/236 (22%), Gaps = 43/236 (18%) Query: 199 ELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDE 258 ++ A++ + ++ + + + ++ K + Sbjct: 345 QIGAARSEDVHPRALEAANKALAMDDALPEAHAAMASVRANDWERSAAEREAKKAIELNP 404 Query: 259 MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL 318 A Y + R + ++ L LA+ +S +G Sbjct: 405 GFALAHLYYSNMLRHLGRREESIAEARRALELDPLSPLTNEELADAQLSARQYG------ 458 Query: 319 AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIH-------STDI 371 A+E ++ +G ++ S +I Sbjct: 459 ---AAIEQYQKTLELYPNQPAPRDSLGWAYVYQRMYDKGLEEIRKSIALYGEDASLSPEI 515 Query: 372 ASLYYYRA-------------------------LVHFHNEKIE--EARICIDKSLQ 400 A +Y + E EA ++K+ + Sbjct: 516 AFIYGITGRKDEARMILSRLLSASKAAPIAAHHFALIYTGLDEKTEAFAWLEKAFE 571 >UniRef50_Q01NM4 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NM4_SOLUE Length = 673 Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats. Identities = 42/331 (12%), Positives = 100/331 (30%), Gaps = 10/331 (3%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPD 180 PF + + + L + + + +I GL ++ F + Sbjct: 229 PFVDNSPGKNQEYFSDGLTEELLNALARIPGLRVTGRTSSFQFKGKTEDYGEIGRKLSVA 288 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPE 238 + G + Q + LI A + F I S VD + + I + + Sbjct: 289 NILEGSVGQQGNRTKVTARLIQASDGFQIWSATFDREVDNIFAVQEQIASAVAGALKVRL 348 Query: 239 RSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + + N L G+ +++ +A FD + + + Sbjct: 349 LAGKNTGPAARSTNAEAYKAYLMGRYFRRQRDKQNLEKAAAYFD---DAIRLDPGYAPAW 405 Query: 299 CLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG-QAKVS 357 L+ S E +KA E + + + +G I + Sbjct: 406 AELSFTRTSQETLRYVPAEEGNRKAEEAVQRALALDPNLAQAHVALGSIQMTRRWDWAGA 465 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDM 417 + F++A+ A A + + ++EA ++++++P + + Sbjct: 466 NASFQRARELEPGNAEAIRGAASLANNLGHLDEAVALGRRAIEIDPLD-SVTYNNLGIVL 524 Query: 418 YVPNPLKNNIKLYYKETESESHRVIIDNILK 448 Y + + + + E R +++ Sbjct: 525 YRAGRPEEAVAEFRRALEITPERERTHSMIG 555 Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 54/185 (29%), Gaps = 41/185 (22%) Query: 244 AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 A + + + E + G L + + A+ + + +I L + Y L Sbjct: 467 ASFQRARELEPGNAEAIRGAASLAN-NLGHLDEAVAL---GRRAIEIDPLDSVTYNNLGI 522 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI---- 359 ++A+ +IT + +++G + + + + + Sbjct: 523 VLYRAGRP---------EEAVAEFRRALEITPERERTHSMIGRVYLVQSRPQEALAEMLL 573 Query: 360 ----------------LFEQAKIHSTDIASLY--------YYRALVHFHNEKIEEARICI 395 + + +A L Y A ++ + E+A + Sbjct: 574 EKRPAFRLFGLGLAYHALGRKQESDASLAELIQKFPTGYPYQIAELYAFRGENEKAFEWL 633 Query: 396 DKSLQ 400 +++ Sbjct: 634 ERAYA 638 >UniRef50_A8UFP6 Putative adenylate/guanylate cyclase n=1 Tax=Flavobacteriales bacterium ALC-1 RepID=A8UFP6_9FLAO Length = 670 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 46/359 (12%), Positives = 121/359 (33%), Gaps = 11/359 (3%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT 161 + D SIA+ PF D I + + I K+ L + Sbjct: 202 SYQYFAKKKALAKDLSIAVLPFDNLSTDNDAEIFRDGITEDILTQLSKLKELRVISRTSV 261 Query: 162 -NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDE 218 + + + Y + G I + + +LIDA + + + Sbjct: 262 MQYKDTKKTIPEIAEELGVSYILEGSIRKYGDDIRITAQLIDATTDEHLWAEDYDKTLIN 321 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRA 277 + + + + I+ + + + + GK+E+ T ES+ + Sbjct: 322 IFSLQTEVSEEIVDALQINLSFEEQQNLAMVSTKNIEAYKLVFEGKREVDTRTKESLANS 381 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + ++ + + + Y +A + + AA+ A LD I Sbjct: 382 ILLY---KEAIVLDPNYADAYAEIANSIYLQTYYSGRDHVEAAKTAHAYLDKAQKINPKT 438 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 ++ ++ G+I + + ++ + FE+A S + + + A ++++++ ++ + Sbjct: 439 SRVYSVRGVINTIEEKHDLALMAFEKAVKLSPNDLTTRHQFATFYYYSKQYKKQLEQAEI 498 Query: 398 SLQLEPRRRKA--VVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTR 454 + +L+P ++ N +N + + + V+ + +L + Sbjct: 499 AYRLDPLSFATANSYFNALIENGKINEGENLLHKIENKITGINPHVLNSSYFRLHMAQK 557 >UniRef50_Q89G09 Blr6539 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89G09_BRAJA Length = 506 Score = 211 bits (538), Expect = 3e-53, Method: Composition-based stats. Identities = 51/327 (15%), Positives = 111/327 (33%), Gaps = 17/327 (5%) Query: 124 PFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPD 180 PF N + + ++ ++ G + A F N I + Sbjct: 112 PFANLNNDPEQDYFADSITTDLTTDLAQMPGAFVIGRGTAFTFKNKQIDFKTLGKELGIR 171 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPE 238 + V G + +N + + L DA + I S+ D L I + ++++ Sbjct: 172 WAVQGAVRRNGDQIRVNVSLTDAASGRDIWSDRFDGDRTNLAALQDQITGRLARSLNIEL 231 Query: 239 RSVRLAKQDQGYKNHYLSDEM-LAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + ++ + + + + G + Y+ + I +A +FDR + + Sbjct: 232 MQAESRRSEKDQSRNPDAMDFTMRGWAKFYEPRSKTEIAQAKDLFDR---ALHLDPDNVD 288 Query: 297 CYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAK 355 A C A S + + A +L+D ++ + + G + G+ + Sbjct: 289 AMIAKAWCLAIAAGFRWSTSMAEDKEIATDLIDRALAKSSSNALAYVVKGDTLRVFGRPE 348 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 + ++ A + + Y + L + + EA + +L+L P+ A V Sbjct: 349 EALPEYDAALEINPNFPIAYAQKGLALILSGRAREAFSPLQLALRLSPKDPIA------V 402 Query: 416 DMYVPNPLKNNIKLYYKETESESHRVI 442 Y + Y+E + RVI Sbjct: 403 SWYYNLCHAHLHLQEYEEATKDCRRVI 429 >UniRef50_Q2SFI0 FOG: TPR repeat n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SFI0_HAHCH Length = 741 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 64/464 (13%), Positives = 143/464 (30%), Gaps = 42/464 (9%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + + E L + ++ + K + L+ L+E+ G + ++ + E +W + D Sbjct: 12 FKIGDWWVDPEANKLADQDCEISLTPKAMTALLALVEAQGRSLGEEQLQEKIWSSSAQPD 71 Query: 69 ESLTRCIYSLRCIFEKIGYDR-CIE----TIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 S+ + I LR F G R IE T V + Sbjct: 72 ASVDQIISQLRKAFGDNGRPRRYIERDGSTYRIVAQMSQPDVDGLCPHSHAKGRRRGLCK 131 Query: 124 PFTTSLNTLDPLILNQELV-------QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSR 176 + L + I I + + + ++ ++ SR Sbjct: 132 WGISVGALALVFALGFGVFYPKSQAPSQIIVYPIQLVDASHHRDSAYLATSVT-DAIRSR 190 Query: 177 F----KPDYF---------------VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD 217 V+G + + L + + D S + + Sbjct: 191 LATLGGARVVFSETAPWSRPDRGSAVSGSLQITGSSLRLILNITDLAGRDSQWSGLIEGE 250 Query: 218 --ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIY 275 +L++ Q + + +L ++ P D+ + D L G+ S+ Sbjct: 251 VRKLYSFHQDLSEALLSQLNVPNDEF----SDRREPDPEAYDYYLQGRHYWSQRDVHSLQ 306 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT 335 RA+ F + + Y L + + L+++ ++K LLD + Sbjct: 307 RALQNFSQ---AISLDGQFAPAYVALCDSYHFLSVYSDMPASTVSEKCAPLLDRAFALNP 363 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + A L G+ + +++A + + A Y + + + ++ Sbjct: 364 GMPQAYASRALQFSEQGRESEAEGFYKKALEMAPNYAPAYLWYGQLLRSQGRFIQSLAMY 423 Query: 396 DKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 +++L+LEP K + + L+ Y + E Sbjct: 424 EQALELEPFSGGINRGKAYTLLRM-GRLEQARDTYQRALALEPD 466 >UniRef50_A3I071 Adenylate cyclase protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3I071_9SPHI Length = 597 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 51/353 (14%), Positives = 122/353 (34%), Gaps = 15/353 (4%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDH 167 + + SIA+ PF N+ + + + I + +I+ L ++ + DH Sbjct: 1 MEKQTEKSISIAVLPFKNISNSEENNFFCDGITEEIINAFSRIEQLKVTSRTSSFYFKDH 60 Query: 168 I-SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQ 224 S + + + G + + + +LID + + L Sbjct: 61 SYSLQEISEKLGVNVILEGSVRVSGNSLRIRAQLIDVIEDTTFWTETWDRKKENLFEIQD 120 Query: 225 FIIDNILQTVHKPERSVRLAKQDQ--GYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 I I + + E + ++ Q +N + +L G+ Y + PE + A+ F+ Sbjct: 121 EISLIIADKLREHEGHLTISDQLVNFPTQNITAYEHLLKGRYHFYKWNPEDVNIAINEFE 180 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG-KIL 341 + + + A+ + +A+ G + E + KA+E + + L Sbjct: 181 K---ALALDPNLIDALLGSADSYSFMAVAGFAPREESWMKAVEAMQLAKVLDPNHAGLNL 237 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 + + ++A + A + + + + +A+ I + + Sbjct: 238 MLSHHAFFTEANFSSAMKFIQKAVVARPTYAEAHQFLSFFNTLKGDFNKAKEHILYAKSV 297 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKL---YYKETESESHRVIIDNILKLKQ 451 +P + + +Y N L IK+ +E E +I+ + +K+ Sbjct: 298 DPLNPETRFFQA-NYLYRTNELDEAIKILNALLEENEKNLPALIVSTYIHIKE 349 >UniRef50_C3KMT2 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KMT2_RHISN Length = 743 Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats. Identities = 44/320 (13%), Positives = 96/320 (30%), Gaps = 16/320 (5%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQN 171 SIA+ PF + + + +I GL+ +T + ++ Sbjct: 226 PDKPSIAVLPFANVSDDPRQEYFADGMTDALVTELAQISGLFVIARNSTFTYKGRAVTAA 285 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDN 229 Y + G + + + +L+DA++ + + ++ + Sbjct: 286 QVSGELGVRYILEGSVQRAGEQLRINAQLVDAQSGGHAWAGKFDGTLADVFALQDDVTRG 345 Query: 230 ILQTVH-KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 I + + + + ++A + D L G + TPE I +A+ F+ Sbjct: 346 IAEALALRLQPGEQMALGRKETTVPAAFDAFLRGWEHHRRMTPEDIAKAVPYFE---EAI 402 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELE-----LAAQKALELLDYVSDITTVDGKILAI 343 + Y A + L A KA + L + Sbjct: 403 ALDPAYGRAYAAAAMVYARLYAWRWHYHLGMTRFEARAKASKYLRTAQRY--KTALAHQV 460 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 GL+ Q + ++A + Y AL + +EA I +++L+P Sbjct: 461 AGLLAEADWQHAQALAELKEAIALEPGDSWSYAMMALTLTSVGRPDEAIPHIRTAIRLDP 520 Query: 404 RRRKAVVIKECVDMYVPNPL 423 + + + Sbjct: 521 HYPSFFMYVLGLTEFSMRNY 540 >UniRef50_C8S437 Transcriptional regulator, CadC n=1 Tax=Rhodobacter sp. SW2 RepID=C8S437_9RHOB Length = 515 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 64/425 (15%), Positives = 129/425 (30%), Gaps = 21/425 (4%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 F F E G L + V + +K +L + + AG V+ K+ ++ +VW + Sbjct: 4 GTFVVQFAEVTLDMGRGRLIGRDGDVALRRKSFVLLCYMTQHAGQVLTKERLMSAVWPEV 63 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVF---------KTKINEDNT 115 VSD+SLT+C++ +R G T+ +GY + Sbjct: 64 TVSDDSLTQCVHDVRRALGGSGASEL-RTVQGRGYLLVLPNQGGNRPIAAPTNGMVPTQL 122 Query: 116 SDYSIAIFPFTTSLNTLDPLILN-QELVQII--SNKKIDGLYTYPMAATNFCNDHISQNS 172 S+A+ PF L + +V + ++ L + F +S Sbjct: 123 RPGSVAVLPFAYDPAVLPDERIWLDGVVNDVISQLVRLRSLDVIGRDSA-FALRDVSGLQ 181 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNI 230 Y + G + + + L ++L+ ++ ++ ++ E+ + D I Sbjct: 182 AGVTLGVAYVLAGSVFRADRDVVLRVDLVATRSQSIVWTDEFRTTGLEIAGLITVLTDRI 241 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 L V + + G + E + RA F + Sbjct: 242 LSVVLNGIDWSERNLARAVPDHALTAWQAYFRGLDAFAQYGEEPLLRARHYFA---LATR 298 Query: 290 IQTLKTECYCLLAECHMSLALHGK-SELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 I + LAEC ++A + A + + Sbjct: 299 IDPSFVSAFAALAECQATIARAPFCQDQPAERAAAQRSAEQALHLDETAPAAHFAFAHTR 358 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 L G + ++ A+ + N +EA + ++ L P Sbjct: 359 WLLGDVDAAFRHARRSVELGPGYATGVAEVGFLAALNGPPDEALHNLARAELLNPVSPFL 418 Query: 409 VVIKE 413 + Sbjct: 419 SSLYI 423 >UniRef50_A5CFS9 Putative uncharacterized protein n=1 Tax=uncultured marine microorganism RepID=A5CFS9_9ZZZZ Length = 627 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 73/476 (15%), Positives = 154/476 (32%), Gaps = 65/476 (13%) Query: 2 DLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 DL + + G+L QG + + + VL++L G VV D I+E+VW Sbjct: 6 DLRKG--FELGPWQVSPDLGLLRQGETEQRVEPMVMNVLVLLASGNGDVVTTDQIVEAVW 63 Query: 62 KNIIVSDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKIN--------- 111 + E++ + I LR + I+TI + GYR V ++ Sbjct: 64 GGRSTATEAIVQKIKVLREKLGDDPKDPKFIQTIPKIGYRVVCPVVVPEVVEPEWLRSFF 123 Query: 112 -----------------------------EDNTSDYSIAIFPFTTSLNTLDPLILNQELV 142 + S S+A+ PF D Sbjct: 124 PAYIWPIVGGISAIAVIAIVVLGNRSGRLQRLESVSSVAVCPFENMSTQAD-EPFVFGFR 182 Query: 143 QII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL 200 + + + + L + C D + D VTG + + + +L Sbjct: 183 EQLISTLSREPNLRIVKAS----CKDDTVP---GEQL-IDSIVTGSVQRAGGRVRITAKL 234 Query: 201 IDAKNLFLIASNHLP-----VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL 255 +A + + S + V+E+ + + + + + + A Y Sbjct: 235 -EANDGEIFWSESIDGAAEEVEEVFGLHERVANRVRSAILGDSETEVSASSSPVNIEAY- 292 Query: 256 SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE 315 D L G + + RA+ F++ D Y A ++ LA + + Sbjct: 293 -DLYLLGDFAFSKRSEPELNRAVDFFNK---AIDQDPNFGPAYLGKANSYLLLADYDPAA 348 Query: 316 LELAAQKALELLDYVSDITTVDGKI-LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASL 374 E + A+E D +++ + G + + F+ A +T + Sbjct: 349 RESMYEMAIETADSGAELDPGIRDAVRTVYGFVDTKRANWAEAAEAFDIAINSATVYPTA 408 Query: 375 YYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLY 430 +++ ++ + +++A + +++ + + V + N +N K Y Sbjct: 409 HHWYSIFLENVGLLDQALEQAIIAREMD-TASPILNARLGVAYHWLNDSENADKYY 463 >UniRef50_B5JIE4 Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JIE4_9BACT Length = 914 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 49/353 (13%), Positives = 111/353 (31%), Gaps = 14/353 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAAT- 161 F T E D SIAI PF + + + + I + T + Sbjct: 304 WFATPTGEAAPEDKSIAILPFENRSMLEEDRFFTDGIHGDLLTQISHIGEIKTISRTSVI 363 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL----PVD 217 + + + + G + + + ++LIDAK L+ + + Sbjct: 364 GYRETNKNLRQIGDELGVSNILEGDVQRAGEQVRINVQLIDAKTDALLWAEGYTRELSAE 423 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYR 276 + + I + I +H + ++ ++ + + G E P S Sbjct: 424 NIFSIQSEIAEEIAAALHAVLSPQERERIEKLPTSNLAALEAYYRGIAE-----PTSTTG 478 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 + + + ++ + LA H+ +E ++ L++ ++ Sbjct: 479 YLQKIEHFERAIELDPEFALAHARLAWVHLKQVWMTSLSIEEQVAESEPLINRALELDPE 538 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 +GL+ + S +A + + + A + + E+A + Sbjct: 539 SSAAYDALGLLWRRKDDFEKSEAALLKAIELNPNNDMAHSTYANELGDHGEYEKALRHVL 598 Query: 397 KSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 K+ +L P + V +E + N + + L + II L L Sbjct: 599 KARELNPYELE-YVQQEAQALKNLNRIDEALLLLERAAREHPDSAIIHRRLGL 650 >UniRef50_A5PAK2 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PAK2_9SPHN Length = 542 Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats. Identities = 48/322 (14%), Positives = 101/322 (31%), Gaps = 9/322 (2%) Query: 124 PFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHISQN-SFLSRFKPD 180 PF L++ ++ I L + D + + R Sbjct: 150 PFRQPAGEATDDYFADGLIEDVTSELSHIRQLQVISRSTAFEFKDSPTPPDAIGRRLGAT 209 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPE 238 +TG I + + L+D + +I S ++++ + I+ + Sbjct: 210 AVLTGSIRRAGDRARISAALVDTDSGMIIWSETFNRTLEDVFAVQDELTREIVTALDVEL 269 Query: 239 RSVRLAKQDQGY-KNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 A+ D+ ++ G E++ F PES+ A +F +++ Sbjct: 270 VHGEQARLDRSRFRSAEAGHIFYRGVFEVHRFEPESMLHARRLFSEF---VEMEPDSVLG 326 Query: 298 YCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 Y L + L E A E I + L L+G V+ Sbjct: 327 YAWLTTSWAASLLVQWEAPEDALPAMQENAAKALAIEPDNAAALIGNVYFHVLTGNLDVA 386 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDM 417 H ++A + + R V + +++ + ++K+L+L P + Sbjct: 387 HDFAQRAVRSAPSSDEALFARGWVEMFLGRFDQSIVSLEKALRLAPIPSAVRLGVAGTSY 446 Query: 418 YVPNPLKNNIKLYYKETESESH 439 +I+++ K E E Sbjct: 447 RNALRFDKSIEIFRKLIEREPQ 468 >UniRef50_Q6W140 Probable adenylate class-3/4/guanylyl cyclase n=4 Tax=Rhizobium RepID=Q6W140_RHISN Length = 769 Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats. Identities = 47/340 (13%), Positives = 101/340 (29%), Gaps = 13/340 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFC 164 ++ SIA+ PF + + + K+ G++ +T + Sbjct: 224 PRMALPLPQKPSIAVLPFENLSSDAGQSYFADGMTDDVITELSKLSGIFVIARNSTFAYK 283 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNT 222 Y + G + + + +LIDA + + + + + Sbjct: 284 GKPTKVQQVAKELGVHYILEGSVRREGNHVRVNAQLIDALDGHHLWAQRYDGEMSGVFGL 343 Query: 223 SQFIIDNILQTVHKPERSVRLAKQD-QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIF 281 +I I+ T+ S + N D +L G L T + A Sbjct: 344 QDRVIGQIVSTLSVKLTSAEKSVAAVPETINPRAYDTLLQGWDHLRRDTEAEMAMAAA-- 401 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGK--SELELAAQKALELLDYVSDITTVDGK 339 Q + + Y LA + ++ S E A++ L + Sbjct: 402 -FFQKAIVLDPSYSRAYASLAAANWRTSILSWNFSRREAASRNLDRNLAKAMEK-PT-PL 458 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 AI + G+ + ++A + + + A V EA + ++ Sbjct: 459 AYAISAQLLAQQGRYDEAFAAIDRAMKLAPNDPDNHVSMARVLNATGHAAEAEQQVRLAM 518 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 +++P KA + V ++ + E +S Sbjct: 519 RIDPHPPKATLRMLAVSLFSQGKYNEAADTLERVIEKKSD 558 >UniRef50_B5JQ34 Bacterial transcriptional activator domain family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ34_9BACT Length = 868 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 97/310 (31%), Gaps = 12/310 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN 162 + T+ + S+AI PF + + I + + Sbjct: 253 YYATQTPDTPPPKRSLAILPFENRSELEKDRFFADGIHDDLITRVSHIPEVKIISRTSVM 312 Query: 163 -FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD---- 217 + + + G + ++ + I+L+DA F + + + + Sbjct: 313 SYRDSDKDLKKIARELGVTNIIEGGVQRSGNQIRINIQLVDAATGFHLWAKNYTREISAQ 372 Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYR 276 + + + + + + + L D + S + GK + T S + Sbjct: 373 NIFALQAEVTEAVARELSPQLSAKTLNPSDTIPTENLASLEAYFRGKSSIALLTNASFEQ 432 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 + F R ++ + + LA +++ + KA +D + Sbjct: 433 GIDHFKR---AIELDPNFAQAHAELANTYLNRIHFQGLPVGEQVAKAQPHIDQALQLNKQ 489 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN-EKIEEARICI 395 + +G ++ + + F++A + + A Y AL + E A + Sbjct: 490 LSEAHVALGFLSFCQIKTAKAIQAFQRAIELNPNNAFAYQQLALAQMYQVGDPEPALVLA 549 Query: 396 DKSLQLEPRR 405 K+ +L+P Sbjct: 550 RKAAELDPYS 559 Score = 42.8 bits (99), Expect = 0.027, Method: Composition-based stats. Identities = 25/215 (11%), Positives = 55/215 (25%), Gaps = 16/215 (7%) Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 Q + + Q V PE ++ LA++ + L+D L L +A Sbjct: 524 NAFAYQQLALAQMYQ-VGDPEPALVLARKAAELDPYSLNDSTL-VPDILITLRRTDEAKA 581 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + L+ + + + +A+ + + Sbjct: 582 I-----LEALLEKNPSDVTALTSMGRLYDVGLYR--------FDQAIRYYRQAFALEPDN 628 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 + + + G ++ + + + R L H +IE A Sbjct: 629 LNLCSYIADAYFDLGDTDAYLEWSKRYLSMAPNSNRANFLRGLAHEFRGEIELATASYS- 687 Query: 398 SLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 +L+ K + Y K Sbjct: 688 ALKQSDEYFDWSAYKLAAISVDRGRPQEAFDRYLK 722 >UniRef50_Q1IP04 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IP04_ACIBL Length = 736 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 40/312 (12%), Positives = 104/312 (33%), Gaps = 14/312 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 A+ F T D + + I +I L+ +A + + + + Sbjct: 315 AVLYFENPGGTKDDEYFRDGITEDIITELSRIKDLWVLTRSAVMAYRDKPAASVEVGKQL 374 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVH 235 + + G + ++ A + L++ + + ++++ I +I + + Sbjct: 375 NAAHVLEGSLRRSGAQLRITARLVETATARSVWAERYDRKLEDVFAIQDEIAQSIAKALK 434 Query: 236 KPERSVRLAKQDQGYKNH-YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 ++ D L G++ Y F +S A +F R I Sbjct: 435 LMLTEQEKRAIEKAPTADVQAYDYYLRGRQFYYQFRRKSFDYARQMFAR---AIVIDPTY 491 Query: 295 TECYCLLAEC--HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG 352 Y +++C H+ + G ++ ++A ++ + GL + Sbjct: 492 ARAYAGVSDCCSHLYMYWGGSADD---LKEAEAASRKAVELDPELAEGHVSRGLALQMVK 548 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + + + F +A + + YY+ A + F +E+A +++ P + ++ Sbjct: 549 KYEEAEAEFGKATDLNPKLFEAYYFFARLCFQRGNLEKAADLFERARLANPEDYQTPILL 608 Query: 413 ECVDMYVPNPLK 424 + L+ Sbjct: 609 AQTLESLERHLE 620 Score = 61.3 bits (147), Expect = 8e-08, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 68/201 (33%), Gaps = 9/201 (4%) Query: 203 AKNLFLIASNHLPVDELHNTSQF--IIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEML 260 A +L + EL + + + K N L + Sbjct: 513 ADDLKEAEAASRKAVELDPELAEGHVSRGLALQMVKKYEEAEAEFGKATDLNPKLFEAYY 572 Query: 261 AGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAA 320 + + ++ +A +F+R + + LLA+ SL H E + A Sbjct: 573 FFARLCFQ--RGNLEKAADLFERARLANPEDYQTP---ILLAQTLESLERH--LEAKAAR 625 Query: 321 QKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRAL 380 +A++L + ++ D + L + + Q + +A D ++ Y A Sbjct: 626 ARAMKLFERHVELHPEDARALYLGASGLIDAKQMDRALDWTNRALSIDPDDPAVLYNVAC 685 Query: 381 VHFHNEKIEEARICIDKSLQL 401 + E+A CI+K+L L Sbjct: 686 SYAKLAMSEKAMDCIEKALAL 706 >UniRef50_Q89CK6 Blr7791 protein n=2 Tax=Bradyrhizobium japonicum RepID=Q89CK6_BRAJA Length = 599 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 42/361 (11%), Positives = 109/361 (30%), Gaps = 13/361 (3%) Query: 91 IETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NK 148 I+T Q + SI + PF + + ++ Sbjct: 177 IQTYAALLDGLYPQRPVGAKVPRSPPRLSIVVLPFANLSGDPLQDYFVDGVTESLTTDLS 236 Query: 149 KIDGLYTYPM-AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLF 207 +I G A + I Y + G + ++ + ++L+D + Sbjct: 237 RISGSLVIGRHTAYTYKGKPIDLKQIGRDLDVRYVLEGSVQRSGDRFRVNVQLVDTETGS 296 Query: 208 LIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKE 265 + ++ P+ +L I+ + ++ + + ++ + D G Sbjct: 297 HLWADRFDKPLADLFEMQDEIVSRLANALNAQLIAAEARRAERSLQPS-ALDFYFQGMAL 355 Query: 266 LYD-FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKAL 324 +T + +A + F+R ++ E +A ++A ++ A Sbjct: 356 WNKSWTSPHLRQARSFFER---ALGLEPDNVEALVGIALVDAAMAGVVFADDPCRYFAAS 412 Query: 325 ELLD-YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHF 383 E + +G++ + +A+ E+A + ++A + + Sbjct: 413 EAASMKALSLDPQHALAHMALGVVQVCTQRAEKGVAECERALALNRNLAEAHALFGVAKM 472 Query: 384 HNEKIEEARICIDKSLQLEPRRRKAVVIK--ECVDMYVPNPLKNNIKLYYKETESESHRV 441 EE + +L+L PR A + I+ + ++ + Sbjct: 473 LLGHPEEMEGYVRDALRLSPRDDGAHRWLCCVGLAKLCLGAEAEAIEWLRRSIKANPNYP 532 Query: 442 I 442 + Sbjct: 533 V 533 >UniRef50_Q1ISU5 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ISU5_ACIBL Length = 798 Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats. Identities = 47/344 (13%), Positives = 102/344 (29%), Gaps = 14/344 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRF 177 A+ PF + N + L+ L + + L +A + + + Sbjct: 346 AVLPFVNAGNDPNTEYLSDGLTDSLIDRLSNLPNLTVMSRSAVFRYKGQQVDPQTVGRDL 405 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVH 235 +TGR+ Q+ + +EL+ AK+ I + + + I +I + Sbjct: 406 HVGALLTGRVIQHGDKVQINVELVSAKDDSHIWGRRYEESLSQAQSVEVRIASDISDRLG 465 Query: 236 KPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 K + Y N+ L G T +S+ + F++ Sbjct: 466 LRLSGEAQQKLRKQYTNNPEAYQLYLKGVYWSNKATRDSLNKGKEYFEQ---AVKNDPNY 522 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG-Q 353 Y LA + +A KA E + + + MG + + Sbjct: 523 ALPYTGLA-VYYRIADDWFMAPHDCMPKAKEAAEKALQLDPSSPQAHTEMGEVYFFYEFR 581 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + F ++ + D A + + + +E + +L+P + Sbjct: 582 WADAEKEFRRSIELNPDYALAHSDLGWLLTSTGRAQEGISESKRGQELDPLSLDTNIYY- 640 Query: 414 CVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK--LKQLTRI 455 + +Y ++K + E L + R+ Sbjct: 641 GLSLYFTRKYDAAETQFHKTLDLEPDYWFAHAYLGRTYARTGRV 684 >UniRef50_C6AV68 Adenylate/guanylate cyclase with TPR repeats n=4 Tax=Rhizobium RepID=C6AV68_RHILS Length = 723 Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats. Identities = 38/358 (10%), Positives = 99/358 (27%), Gaps = 17/358 (4%) Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCN 165 S+A+ PF + + + + L + + Sbjct: 208 WQWPFVPQRPSVAVLPFANLSSDAGQDYFTDGITDSLIADLTMLSDLDVIGHNSVFAYKG 267 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTS 223 + + V G + + + +L DA + + +N ++ Sbjct: 268 KPLVLADIGRDLGVRFIVEGSVQRIGDQIRVNAQLSDAASGDHLWANRFNRAAADVMAVQ 327 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFD 282 + I + + + + + D L ++ + A+ +FD Sbjct: 328 DELSRQIAEALGLKLTQSEAERITRPPTANLEAYDYYLRAEQATRTGRRSRLLEALALFD 387 Query: 283 RLQNKSDIQTLKTECYCLLAE---CHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 + + E + A A + LA ++A E + V Sbjct: 388 K---AEALDPGFAEAFAADAHATAYVWRSAYDDVLQSALARKRAYEKASRALALDPVLSS 444 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 A++ ++ + + + + +QA A + A V + EA ++ +L Sbjct: 445 PYAVLAVMQVVDRRYEQAVASAQQAVSLGPADAEAHMALAYVQLFSGNHAEAGAAVETAL 504 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR-----VIIDNILKLKQL 452 + +P + Y+ I + + + + + +L Sbjct: 505 RHDPNLSAINRYTAGLVFYLQRDYTKAIDSFERARDGSPGNGDFVTPLAMAYARAGRL 562 >UniRef50_A6UG63 Adenylyl cyclase class-3/4/guanylyl cyclase n=5 Tax=Rhizobiaceae RepID=A6UG63_SINMW Length = 643 Score = 204 bits (519), Expect = 5e-51, Method: Composition-based stats. Identities = 39/369 (10%), Positives = 101/369 (27%), Gaps = 12/369 (3%) Query: 94 IYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKID 151 + G + E + ++A+ PF D L + I + + Sbjct: 205 VRAIGADMVDSFGRLTGAELADARPTVAVLPFDDMSGGADQAYFADGLTEDIIANLARNR 264 Query: 152 GLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIA 210 L +T R Y V G + + +LIDA++ + Sbjct: 265 ELQVIARNSTFALRGQAEDIRRIGERLGAGYVVEGSARRAGDQLRVVAQLIDARSGAHLW 324 Query: 211 SNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELY 267 S V+++ + + I+ + R ++ + + D +L + Y Sbjct: 325 SRSYDRRVEDIFSVQTELTAEIVSHLVSYVRESEVSNAAEQPTENLQAYDLVLQAR-NRY 383 Query: 268 DFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL--AAQKALE 325 + + L ++ L ++ + + + L Sbjct: 384 KHGSKDAEALIASRALLHRALELDPGYAAARASLGMTYIVDFVQNLTGRATVTDVETGLS 443 Query: 326 LLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 + ++ +G + ++A + + A Sbjct: 444 ESRQAVRLDPNLAVGYQVLSFGLSATGDYPGAMQAAQRAVELNPNDPDSLMALAKAQVRF 503 Query: 386 EKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK---ETESESHRVI 442 +EA +++ +L P + +Y L ++ + E ++ Sbjct: 504 GSYDEAVQNAERARRLHPMAPEYYTYVYGQALYAAGRLDEADEVLRECLIRAPREPDCLL 563 Query: 443 IDNILKLKQ 451 I + ++ Sbjct: 564 IQTAVLSQR 572 >UniRef50_Q021X4 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q021X4_SOLUE Length = 850 Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats. Identities = 49/340 (14%), Positives = 105/340 (30%), Gaps = 12/340 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN 162 N +T +SIA+ PF S + + +I L + + Sbjct: 379 NRMGTPNRADTGMWSIAVLPFENSSGDPGQEYFADSMTDAVITELARIRSLRVISLTSVM 438 Query: 163 -FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE--- 218 F + G + ++ + + L++A + S + Sbjct: 439 PFKGGGRRLPEIARSLRVGAIAEGSVQRSGDRARITLRLVNAARDRQVWSGTFEREIRNV 498 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAM 278 L Q + S R+ + N + L G+ L+ + + +++ Sbjct: 499 LALQRQAAAAVASEIRATLTDSDRVRASESPRVNVDAYETYLKGRHALFRSSVGDLQQSI 558 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +F + I Y LAE +M+L+ E A KA ++ + Sbjct: 559 QLFHQ---ALGIDPRYALAYAGLAESYMTLSGMYLRPRE-AMPKAKAAAQRALELDSDLA 614 Query: 339 KILAIMGLIT-GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 + IMG+I + + F++A + + A + + + + + Sbjct: 615 EAHFIMGVIQGSYEFDWRRAEDEFKRALDLNPNNALAHLWYGQSLVATGRSHDGIEQVRI 674 Query: 398 SLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 + L+P V ++ I+ TES+ Sbjct: 675 AHDLDPLSA-FVETGLGQMYFLCGDYAQAIQQLRSVTESD 713 >UniRef50_A8TLG8 Putative uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TLG8_9PROT Length = 472 Score = 204 bits (518), Expect = 7e-51, Method: Composition-based stats. Identities = 37/306 (12%), Positives = 86/306 (28%), Gaps = 10/306 (3%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQI--ISNKKIDGLYTYPM-AATNFCNDHIS 169 SIA+ PFT + L+ + + + ++ L+ ++ + + Sbjct: 76 QPVGKPSIAVLPFTNMSGDPEQDYLSDGITEDMITALARLRWLFVIARHSSFVYKGRAVD 135 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFII 227 Y + G + + + +LIDA+ I + D ++ I Sbjct: 136 VRQVARELGVRYILEGSVRTSGQRIRITGQLIDAETGNHIWAEKYDRDSRDIFAVQDDIT 195 Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQN 286 ++++ V + + + + + L A + Sbjct: 196 EHVVAAVEPHLYAEEGFRASSTQPDSIDAWGLVARALMLLNKVEHTQNEEAQVLL---LR 252 Query: 287 KSDIQTLKTECYCLLAECHMSLAL-HGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 ++ + LLA AL + + + + A D + G Sbjct: 253 AIALEPGYARAHALLAWAAWWAALCYWVDDTQEGYRTAAAHAQDALSYDPTDPWARMVSG 312 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 L +GQ + + A + +EA ++L++ P Sbjct: 313 LCFSTAGQHDRALGELQAALRLNPSFGLGRMALGWGLLRAGSFDEAVAETGRALRMSPVN 372 Query: 406 RKAVVI 411 A Sbjct: 373 SFAGFY 378 >UniRef50_Q7NE08 Glr4072 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NE08_GLOVI Length = 946 Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats. Identities = 38/309 (12%), Positives = 92/309 (29%), Gaps = 10/309 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT- 161 + + + +IA+ PF + + I+ KI L +A Sbjct: 417 WTSNFGSPASAAARTIAVLPFANIDGDSRSAYFSDGMTFDITNQLGKIADLTVIASSAAM 476 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDEL 219 + + +TG + +N + +L+D + S + ++ Sbjct: 477 QYRGTTKALREVARELGAGTILTGSVRRNGNRVRIVSQLVDPATGQQLWSQDYERQLKDV 536 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAM 278 + + I + + + + Q D L G+ L + A+ Sbjct: 537 FAIQAEVSEQIARRLQARLSATEKLRLTQVPTASITAYDYYLKGRDYLGRRSRADNDLAI 596 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +F R + + L + S A + E ++L+ + + Sbjct: 597 ELFKR---ALALDPNYALAHAGLGSAYGSKATR-YGQEERWEAESLKAIKKALVLDPNLS 652 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + +G G+ + + F++ + + + + +EE +S Sbjct: 653 QAHKALGSYYYGRGRYRQALASFKRGAELNPSLPVVAGAYGGLSAAMGNLEEGVRWSKRS 712 Query: 399 LQLEPRRRK 407 + L P R Sbjct: 713 IALNPTRNG 721 >UniRef50_UPI0001907507 adenylate/guanylate cyclase n=4 Tax=Rhizobium etli RepID=UPI0001907507 Length = 583 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 107/336 (31%), Gaps = 13/336 (3%) Query: 87 YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF---PFTTSLNTLDPLILNQELVQ 143 + ++ I + ++ T + S A PF T D LV+ Sbjct: 144 GPQSVKNIPEPIDVWQVELDGTAPSPVRLSGQVRASIAVLPFQNFSVTPDQDFFVDGLVE 203 Query: 144 II--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL 200 + + L+ +T + Y V G + ++ + ++L Sbjct: 204 DVITELSRFRWLFVIARNSTFAYKGTAKDVRKIARELGVRYVVEGSVRRSGERLRITVQL 263 Query: 201 IDAKNLFLIASNH--LPVDELHNTSQFIIDNILQTVHKPERSVRLA-KQDQGYKNHYLSD 257 +DA + I + P+ + + I I+ + + + + N + Sbjct: 264 VDALSGAHIWAERWDRPIADFFDVQDEITRRIIAGIEPELGAHERSLALAKSTDNLTAWE 323 Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK-SEL 316 G EL F S A + + Y LA +L L G+ +E+ Sbjct: 324 LCHRGFAELLSFEAGSQATAEKFLRQ---ALEHDPNFALPYAYLARHRYALVLWGRAAEV 380 Query: 317 ELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYY 376 +A ++ L +I A+M L+ ++G+A + + EQ + + A L++ Sbjct: 381 PVAVEEGLSFATKALEIDRRSDIAYAMMSLLLTVAGRAAEAMPVAEQGLALNQNYAFLHF 440 Query: 377 YRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + + ++ L P K Sbjct: 441 AHGMAAVRLRDADATIRAAQNAIDLSPHDPSMFAFK 476 >UniRef50_B5JJC9 Tetratricopeptide repeat domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JJC9_9BACT Length = 716 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 34/339 (10%), Positives = 97/339 (28%), Gaps = 14/339 (4%) Query: 121 AIFPFTTSLNTLD-PLILNQELVQIIS--NKKIDGLYTYPMAATN-FCNDHISQNSFLSR 176 A+ PF + + + + + L + + S Sbjct: 171 AVLPFANMSEDPEASSFFADGVHEDLLTNLAYVSELSVSSRTSVMAYRETTKSIRQIGEE 230 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTV 234 + G + + + +LIDAK I + ++++ + I + Sbjct: 231 LGVGNLLEGSVRRAGNRVRVTAQLIDAKTDEHIWAQSYDRNLEDIFAIQSELAKAITDAL 290 Query: 235 HKPERSVRLAKQD-QGYKNHYLSDEMLAGKKELYD--FTPESIYRAMTIFDRLQNKSDIQ 291 + + N D +L ++ + TP+ ++++ R + Sbjct: 291 RIALTDQETDNLEKRPTSNLAAYDLVLKHRELVKRDGNTPDRQTESISLLQR---AVTLD 347 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL- 350 E + LA + +A + +++ + + ++A G Sbjct: 348 PDFAEAWAELAAVYAQSYFWYYERSSERLDQATQAIEHAKRLAPDNLNVIAFSGDYYYYG 407 Query: 351 SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVV 410 + +E+ + + + + E+ + L+++PR V+ Sbjct: 408 FRDYAKASNSYERVLEAAPNHVGALASVGFIRRREGQWAESIRWHRRVLEIDPRNV-TVL 466 Query: 411 IKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 I++ + ++ + +L L Sbjct: 467 TGLQTTYRTMRHFDEAIEMAETLYALDPSNLLNEFLLTL 505 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 9/108 (8%) Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHF---------HNEKIEEARICIDKSLQLEP 403 + S L ++A D A + A V+ +E++++A I+ + +L P Sbjct: 332 RQTESISLLQRAVTLDPDFAEAWAELAAVYAQSYFWYYERSSERLDQATQAIEHAKRLAP 391 Query: 404 RRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ 451 + Y Y + E+ + V + + Sbjct: 392 DNLNVIAFSGDYYYYGFRDYAKASNSYERVLEAAPNHVGALASVGFIR 439 >UniRef50_A4A7B5 Adenylyl cyclase class-3 family n=2 Tax=unclassified Gammaproteobacteria RepID=A4A7B5_9GAMM Length = 741 Score = 203 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 47/362 (12%), Positives = 110/362 (30%), Gaps = 17/362 (4%) Query: 92 ETIYRKGYRF---SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS-- 146 ET+ + D SIA+ PF D + + + Sbjct: 116 ETVPAAETVASASTSDEAMVAAATPPVQDASIAVLPFADLSPDGDQEYFADGISEELLNV 175 Query: 147 NKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN 205 ++DG+ ++ F + + + G + + +LI + Sbjct: 176 LAQVDGMKVAGRTSSFAFKGRNEDLREIGQVLNVAHILEGSVRSQGDKVRVTAQLIQVSD 235 Query: 206 LFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAG 262 F + S D ++ I IL + S + + + + L Sbjct: 236 GFHLWSQTYDRDLSDIFAVQDDIAQQILVAMTDELMSDKAPSIAPAARTDISAFNLFLEA 295 Query: 263 KKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLA----LHGKSELEL 318 + + ++ RA+ + ++ +I Y A+ + L+ +G + Sbjct: 296 RDLISTRDEAAMQRALELLNQ---AIEIDPTYAPAYASRAKAYTLLSDRPGSYGSIPAKE 352 Query: 319 AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR 378 A A +D + + A+ GLI +G+ + +A + + + Sbjct: 353 ALAHARANVDKALALDSKLADAYAVQGLINADTGRPDFAVSSLRRAIELNPNSLDARNWL 412 Query: 379 ALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESES 438 L N ++ + + + ++P R V + Y + K+ + + Sbjct: 413 GLALSFNGRLRDVADQLKTLVDIDPLYRP-GVTNTILYNYRIGDFETAKKVGERYIRANP 471 Query: 439 HR 440 R Sbjct: 472 GR 473 >UniRef50_Q01U02 TPR repeat-containing protein n=2 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01U02_SOLUE Length = 671 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 55/379 (14%), Positives = 121/379 (31%), Gaps = 19/379 (5%) Query: 68 DESLTRCIYSLRCIF-----EKIGYDRCIETIYRKGYRFSGQVF---KTKINEDNTSDYS 119 D + LR + R + R GY E + + Sbjct: 139 DPVVRVEARRLRDRLKTWYEGEGRNARIRIELPRGGYAPLFHDPAAASAPKQELAPAQRT 198 Query: 120 IAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLSR 176 +A+ PF + + L L + + S K+ L +A + + Sbjct: 199 MAVLPFANLNPSPENDYLCDGLTEELIHSLTKVRELRVVAWISAARMRGREQDLGAIREQ 258 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTV 234 + + G I + +LI++ + + + S ++ + I I+ T+ Sbjct: 259 LGVETILRGSIRCLGDRLRITAQLIESASGYYLWSEAWDRSTSDVFAIEEEIAQAIVNTL 318 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 + + N + L G+ +PE + + F+ + + Sbjct: 319 RVQLWPESPTRLTRKATNIECYNAYLKGRFHWNKRSPEGLRLGLRCFE---DAVALDPDW 375 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSGQ 353 + L + LA +G E A A + + + + A +GL+ + Sbjct: 376 ALGWAGLGDSFAVLAENGLLPQETAIPAANRAAERATSLDPNLAEAYATLGLLRCRYDWK 435 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRAL-VHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + + F +A + A+ +++ ++EEA + ++ L+P A + Sbjct: 436 WDEAAVFFRRAIDLNPGYATAHFWYGFHYLAMTGRLEEALAEAELAVSLDPLSVIAQEGR 495 Query: 413 ECVDMYVPNPLKNNIKLYY 431 V M V + I+ Y Sbjct: 496 GFVLM-VSRRYEEAIEQYR 513 >UniRef50_A1ZHF0 Adenylate cyclase; Cya3, putative n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZHF0_9SPHI Length = 594 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 46/336 (13%), Positives = 112/336 (33%), Gaps = 12/336 (3%) Query: 114 NTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNF-CNDHISQ 170 SI + PF + + + + + I + +I GL ++ + N H+ Sbjct: 1 MPKPKSIVVLPFANLSTSNENEFFSDGITEEIINALTRIPGLRVTSRTSSFYFKNKHLPV 60 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIID 228 + + + G + + +LIDA + S VD + + + Sbjct: 61 TNIGQQLNVALLLEGSVRLAGDQMRITAQLIDAAEDVHLWSETWDRKVDHIFDIQDEVSL 120 Query: 229 NILQTVHKPER--SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 + + ++ + +++ + L G+ + PE +++T F++ Sbjct: 121 LVADKAREFLGHFDIQAQLINPQTQSYQAYEWYLKGRFYFRKWNPEDAQKSVTCFEQ--- 177 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 + E LA+ LA G E A Q+A ++ I + Sbjct: 178 ALKLDPHHAESLLGLADALGFLATTGAMEHATAWQRAEVCINQALVINHQLPEAHYQRSN 237 Query: 347 ITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 + G ++ QA + + A + ++ EA+ +D+ L +P Sbjct: 238 LLFFTQGNYSMAVQAAVQAHKLNPNYAEANQHLTFLYLIAGNNIEAKAHLDQLLMFDPLS 297 Query: 406 RKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 ++ +Y + ++ + + ++ V Sbjct: 298 QETRFFHAFF-LYQQHHFAQSLDILNQSLQTNQLNV 332 >UniRef50_C3KQQ8 Probable adenylate class-3/4/guanylyl cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KQQ8_RHISN Length = 743 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 42/392 (10%), Positives = 106/392 (27%), Gaps = 21/392 (5%) Query: 75 IYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDP 134 + + R G I + SIA+ PF D Sbjct: 199 VAATRR----PGQRALILATGATLLIALTAIAFAWQWPFAPQRPSIAVLPFLNLSGDPDQ 254 Query: 135 LILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNN 191 + + ++ L + + + + V G + + Sbjct: 255 DYFTDGITDNLITDLARLSDLDVVSRNSVFAYKGKPVVLADIERDLGVRFVVEGSVQRTG 314 Query: 192 AVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 + +LIDA + + +N ++ + I + + + + Sbjct: 315 DQIRVNAQLIDAASGDHLWANRFGRGGADVFAVQDELSRQIAEALGLKLTPSEAERIARP 374 Query: 250 YKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE---CH 305 + D L +E + A+ +FD+ + + E + A Sbjct: 375 PTANLEAYDYYLRAAQETRTGRRSRMLEALALFDKAET---LDPGFAEAFAADAHATAYV 431 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 A + LA ++A + + A++ ++ + + + + +A Sbjct: 432 WRSAYDDVLQSALARKRAYDKASRALALDPELSSPYAVLAVMQVVERRHEQAITSARKAV 491 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKN 425 A + A V + EA + +L+ +P + Y+ Sbjct: 492 SLGPADADAHMAFAYVQLVSGNHAEAAAAVATALKHDPNLSAIGRYTAGLVFYLQRDYAK 551 Query: 426 NIKLYYKETESESHR-----VIIDNILKLKQL 452 I + + + + ++ +L Sbjct: 552 AIDNFERARDGSPGNGEFVTPLAMAYVRAGRL 583 >UniRef50_B5JPL3 Tetratricopeptide repeat domain protein n=2 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JPL3_9BACT Length = 783 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 53/364 (14%), Positives = 121/364 (33%), Gaps = 19/364 (5%) Query: 94 IYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK--KID 151 I+ + + SIA+ PF N + + + + +I Sbjct: 149 IFGALALYFYFTRSVVDPSSEVFEKSIAVLPFDNRSNVDEDQFFTDGIHDDLLTQISRIR 208 Query: 152 GLYTYPMAATN-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIA 210 + T + + + + + G + ++ + ++LIDA I Sbjct: 209 DIKTISRTSVMAYKDTTKNMRQIGEELGVATLLEGGVQRSGDQIRINMQLIDASKDKHIW 268 Query: 211 SNHLPVD----ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKE 265 + + + I D + + + + + + G+KE Sbjct: 269 AETYTREMSARNVFAIQSEITDAVAAALRSVLSPEEQEHLKEAPTENLEALEAFFEGRKE 328 Query: 266 LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE 325 L T ESI +A+ F R ++ + Y A C + L H E K Sbjct: 329 LNKRTAESILQAIVHFRR---AVELDSSFARAYAQWAICELLLIFHAGRSPEEQVAKTES 385 Query: 326 LLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI-LFEQAKIHSTDIASLYYYRALVHFH 384 L++ + T +G+ G ++++ FE+A + + +Y A Sbjct: 386 LIESAFGLDTRLEDSYVALGMQERYRGGSRMATALAFEKAVELNPNNIDVYAEYAPFLIW 445 Query: 385 -NEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLY-----YKETESES 438 + E+A ++K+ +++P+ + V + + + + ++L +S Sbjct: 446 DMGRPEDAVELLEKAYRIDPKNAQ-VQGNLADALRLSSQSEEALELLSDVIRENPDQSHL 504 Query: 439 HRVI 442 H V+ Sbjct: 505 HHVL 508 Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 44/142 (30%), Gaps = 10/142 (7%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 + R + L+ I + LA+ + ++ALELL V Sbjct: 446 DMGRPEDAVELLEKAYRIDPKNAQVQGNLADALRLSSQS---------EEALELLSDVIR 496 Query: 333 ITTVDGKILAIMGLITGLS-GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + ++G+I S + A + ++ A V+ ++ Sbjct: 497 ENPDQSHLHHVLGVIYIDSFQDYPNAIESLRTAHSLNPLNPNILSSLAQVYASVGDLDST 556 Query: 392 RICIDKSLQLEPRRRKAVVIKE 413 +D+ ++ PR + Sbjct: 557 VYWLDRIVRKHPRYEDVEFCRL 578 >UniRef50_Q89G05 Bll6543 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89G05_BRAJA Length = 667 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 48/344 (13%), Positives = 110/344 (31%), Gaps = 17/344 (4%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPD 180 PF+ + + I + + L + + ++ + Sbjct: 281 PFSNMSGDPEQDYFADGVTADIITALSRFRALVVIARGTSFALRDKGMTSQQIAQQLGVQ 340 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPE 238 Y ++G+I + + EL + + + S+ P+ ++ + + ++ V Sbjct: 341 YVLSGQIRKAGNRIRVSAELTHSGSEAQVWSDRYDRPLTDIFDLQDDVSSSVAAVVDPAV 400 Query: 239 RSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTEC 297 RS + + + + D L L+ T E I +A+ + + + ++ Sbjct: 401 RSAEIERARRKPPTNLSAYDLYLRALHHLWGGTREDITKAIDLLRQ---SLSLDEARSPT 457 Query: 298 YCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SGQAKV 356 LA + + G A +AL L + D A+ G +G Sbjct: 458 LAALAWGLVMASPLGAHTSPDATTEALSLARRAVEQDGTDAFAHAVYGFTLFGPAGDNDQ 517 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 I +A + A + ++ E A C+ +SL L P + + Sbjct: 518 GRIHAVEAVRLNPSSAFAWGTLGMIDSMAGDYENAVTCLHRSLVLSPYDSMLHLWMTGLT 577 Query: 417 --MYVPNPLKNNIKLYYKETESES-----HRVIIDNILKLKQLT 453 + ++ I K + HR++ N++ +L Sbjct: 578 ASCFALGRHEDGIAWARKSVQHNPGNGTGHRMLAANLVAAGRLE 621 >UniRef50_Q5LMB3 Adenylate/guanylate cyclase n=1 Tax=Ruegeria pomeroyi RepID=Q5LMB3_SILPO Length = 590 Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats. Identities = 42/392 (10%), Positives = 113/392 (28%), Gaps = 18/392 (4%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 I +S + + ++G + ++ I + + + + Sbjct: 128 GGICISRSVHDQVRGKVDAELIELG-PQPVKNIPDPVEVWRVGAEGIACAAEKPAVRAEL 186 Query: 122 IF----PFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSFL 174 PF + L +V+ ++ + L + + H Sbjct: 187 PAVVILPFDNMSADPEQDFLADGIVEDVTTELSRFRTLTVIARNSAFAYKGSHKDVRQIA 246 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQ 232 Y V G + + +LIDA+ + ++ +L + + IL Sbjct: 247 EELGVRYVVEGSVRRAGDRLRATAQLIDARTGAHVWADRWDRTMADLFDLQDELTAAILS 306 Query: 233 TVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 V + + + + G E +T E +A + R Sbjct: 307 GVEPELGAHERNLARRKPTDSLTAWEMCQKGYSEFTRYTDEGYSQAHAYYTR---AIAAD 363 Query: 292 TLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITGL 350 + LLA + G++ + L+ + +G++ + Sbjct: 364 PDFALPHALLARLAWVKVITGRTRDPAAEISTGLDHAAQAIERDDRLEIGYVALGVLLAI 423 Query: 351 SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI--EEARICIDKSLQLEPRRR-K 407 +G+ + + ++A+ + + A L++ R +++ + +L+L P+ Sbjct: 424 TGREQDAADALDKAEALNPNNAVLHFGRCHACLFMQRLDCDRLERAARTALRLNPKDPMA 483 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 + + + + E+ Sbjct: 484 WGFWFQLGNAFTFRDIDAAEPEALAAYETACR 515 >UniRef50_A8TWN7 Adenylate cyclase cya3 n=4 Tax=Alphaproteobacteria RepID=A8TWN7_9PROT Length = 681 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 48/321 (14%), Positives = 100/321 (31%), Gaps = 11/321 (3%) Query: 136 ILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNS-FLSRFKPDYFVTGRINQNNA 192 L L I K+ L+ + + + R DY +GR+ + Sbjct: 309 GLADGLTHDIIARLAKLRSLFVIARGSVFTLAEQGTLPEEAARRLNVDYVASGRVRLDQR 368 Query: 193 VNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 + +EL++A++ ++ ++ P+++ I + I+ ++ + + Sbjct: 369 QVVVDVELVEARSGRIVWADTFDQPLEDALILLDEIGNRIVASIANEVETAERNRALLKA 428 Query: 251 KNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLA 309 N + G +Y FT + +A F Q + + + L+ H A Sbjct: 429 PNSLDAWEAYHRGLWHMYRFTKDENAQARHFF---QMAVRLDPTFSRAHAGLSFTHWQSA 485 Query: 310 LHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHST 369 + + + +A D MG L G+ S + E+A S Sbjct: 486 FQQWDDRDQQSDQAFAAAGQGLLADEHDPAAHWAMGRALWLRGRQDGSLVELERAVELSP 545 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV--VIKECVDMYVPNPLKNNI 427 + A +Y + V + A D S L P + + + + Sbjct: 546 NFALGHYALSFVQSQSGDPLAAIRASDHSRHLSPFDPLLFGMLGTRAMAHVRLGQYEEAV 605 Query: 428 KLYYKETESESHRVIIDNILK 448 + K + I I Sbjct: 606 EWALKAAARPNAHPSIQAIAA 626 >UniRef50_A9DZ64 Serine/threonine protein kinase n=1 Tax=Kordia algicida OT-1 RepID=A9DZ64_9FLAO Length = 583 Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats. Identities = 42/324 (12%), Positives = 102/324 (31%), Gaps = 13/324 (4%) Query: 128 SLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPDYFVT 184 N +D + + + I + I L ++ F H+ + Sbjct: 1 MSNDIDNEYFSDGITEEIINALSNIKALKVIARTSSFVFKGKHVDVRKVGKELNVSTILE 60 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVR 242 G + + + +LID + S + +D++ I I + + Sbjct: 61 GSVRKAENRVRISAQLIDTTDGTHYWSKNFDRELDDIFKLQDEISLLIADKIRENFGHFN 120 Query: 243 LAKQ--DQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 + + E L KK + F + ++I +N + + Sbjct: 121 VDDSLVTHHNISTAAYHEYLKAKKLISRFNKDDALEGISIL---KNVIEQYPTFALAHVH 177 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL-ITGLSGQAKVSHI 359 + + LA G ++ A + L+ ++ ++ +G K + Sbjct: 178 IHYAYNILAAAGLMPVKKAFEIGGHYLETAHNLKVDLPEVHHSLGWDALNKKWDFKSAAC 237 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 ++A + + + ++EA I I+K+ L+P Sbjct: 238 HLKKALELKPGYSDAHQKLFITLILEGNLDEANIHINKAYTLDPLNDLNNYFMGYNAY-- 295 Query: 420 PNPLKNNIKLYYKETESESHRVII 443 N +N +K ++K+ +++ I+ Sbjct: 296 INKDENAVKKHFKKCFEINNKFIV 319 Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats. Identities = 10/111 (9%), Positives = 33/111 (29%), Gaps = 9/111 (8%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 L+ +++ ++ + L + E +A ++ + ++ Sbjct: 238 HLKKALELKPGYSDAHQKLFITLIL---------EGNLDEANIHINKAYTLDPLNDLNNY 288 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 MG ++ F++ + Y AL + + ++ Sbjct: 289 FMGYNAYINKDENAVKKHFKKCFEINNKFIVGYGIYALALAYLIQPDKIIE 339 >UniRef50_Q89ET6 Blr6986 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ET6_BRAJA Length = 658 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 46/333 (13%), Positives = 104/333 (31%), Gaps = 14/333 (4%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATN 162 + SI + PFT N + + + +S +I+ + + Sbjct: 248 YMHQGEPQPLNHRLSIVVLPFTNLSNASEQEYFAEGITDDLSADLSRIEDSFVIAPSTAR 307 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELH 220 ++ Y + G + + +++ + LIDA+ I S + D + Sbjct: 308 AY-KNVDPKRVGRELGVRYILDGSLRRTDSLVRINARLIDARTGAEIWSERVDGDWSKSM 366 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYD-FTPESIYRAM 278 I + + + + + N+ + D + G L ++ E + ++ Sbjct: 367 QLQDIITGRLARRLDLELTNQESRDAEVMRPNNPDAVDLTMRGWAVLNQPYSREQLSQSR 426 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYVSDITTVD 337 +F+R I + LAE + ++ ++A + V D Sbjct: 427 ALFER---ALQIDPGFPKALVGLAETLAMEVNYRWTDAPADQLRRAESAVGQVLSKFPSD 483 Query: 338 GKILAIMGLITGLSGQ-AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 + G I SG+ + + +E A + +A + + EA + Sbjct: 484 AMAHFVRGEIQRASGRNVEAAVGEYEAAIAINPSLAPAHGALGAAKIRVGRSAEAFAPLQ 543 Query: 397 KSLQLEPRRRKAVVIKECV--DMYVPNPLKNNI 427 ++QL PR + + I Sbjct: 544 MAIQLSPRDPLLSTWYFYIGHAHSHLGQYEGAI 576 >UniRef50_A9GYL5 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Roseobacter litoralis Och 149 RepID=A9GYL5_9RHOB Length = 588 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 56/392 (14%), Positives = 128/392 (32%), Gaps = 24/392 (6%) Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIY----------RKGYRFSGQVFKTKINEDNTS 116 S+++ + L +G ++ I + ++ +S Sbjct: 136 SEDAYRQVRSRLEVEISDLGE-HELKNIAEPMRVYAIYSGTMTAPHLEHGRSATASVPSS 194 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSF 173 IA+ PF + +V+ ++ ++ L + F + + Sbjct: 195 KPCIAVLPFANMSADPEQDYFADGIVEELTTGLARMRWLTVISRNSAFAFKDKAMDVRRI 254 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNIL 231 Y V G + + + ++ID ++ + +D++ + + I+ Sbjct: 255 GRDLSVGYIVEGSVRKAANSVRISAKMIDTESGAHLWGEAFTGRLDDIFDLQDEVTAGIV 314 Query: 232 QTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 V + + + + + + D L + + FT E+ A+ + D I Sbjct: 315 AAVEPSLKQAEIDRAKRKRQENLSAYDLYLRALDQAHKFTQEARDSALKLLD---EAIKI 371 Query: 291 QTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT-G 349 E + + A CH L G + + +L + V++ T D L+ + Sbjct: 372 DPDYAEAHGVAAYCHQQRYLWGGCDPQDRLA-SLHHAEAVAEGRTDDATPLSFAAMALSA 430 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR--K 407 L Q +V+ + +A S + A R+LV K E+ + +SL+L P Sbjct: 431 LDNQHEVAATMLARALDLSPNSALALICRSLVMTILGKPEKGAVDAAQSLRLSPFDPLRH 490 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 + M K + + ++ Sbjct: 491 IPECVLAIAMLAVGHSKEAVDHARRAVDANPM 522 >UniRef50_A3JWJ0 Putative regulator protein n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWJ0_9RHOB Length = 652 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 58/349 (16%), Positives = 122/349 (34%), Gaps = 19/349 (5%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 A+ PF P L L+ I+ +T + N Sbjct: 261 AVLPFDFFGPEPTPEYLALGLLDQITCHLASYRAPAVISSNSTRGYRGQSPDLNQIRRDI 320 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVH 235 P Y VTG + ++ ++L++AK+ ++ + D + + Q + ++I +T+ Sbjct: 321 DPTYVVTGSVLLQKGEASVSVQLVEAKSSLVLWAGSFVVASDTVFSVRQGVAESIARTLM 380 Query: 236 KPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 L +L K ++ S A + + I Sbjct: 381 PNVNLAELRTTTTQNDEALGPYHLVLRAKDLIFQLETGSFELAGGLLMQ---AVTIDPTF 437 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALEL-LDYVSDITTVDGKILAIMGLITGL-SG 352 + LL E + G S+ A +++LEL + + DG+I+++MG + Sbjct: 438 AAAHALLGEWYALRIWQGWSKQPDADRRSLELHVKRAVALAPGDGRIVSLMGHCRMMFDQ 497 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP------RRR 406 + + LF+QA + + A + ++++ + + L+L P R Sbjct: 498 RHNEALTLFDQAIELTPNDAETLAWSVPTLAYSDQADRGVAHGKRVLELSPLDPFIFRNE 557 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRI 455 + I + + + Y + + S+ I I L++ TR+ Sbjct: 558 HFLSIALFMTGDYDGAAEKGLSCYRRAPDYSSN--IRMTIAALQRATRL 604 >UniRef50_A9DT48 Adenylate cyclase cya3 (Sinorhizobium meliloti) n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT48_9RHOB Length = 493 Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats. Identities = 62/418 (14%), Positives = 123/418 (29%), Gaps = 37/418 (8%) Query: 43 LLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGY--- 99 L G V +D +IE +W+ V+ +S+ +CI +R + E I R +ET+ RK Y Sbjct: 3 LARVPGETVNQDALIEEIWQGRAVTPDSVAQCIAEIRRVLEDIDK-RIVETVPRKVYRLV 61 Query: 100 ------------------------RFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPL 135 F IA+ PF Sbjct: 62 PPTAAVPDRSSRKQQLALLAVMVLCICAFAFALLRPGAPPGPPVIAVLPFDDFSPLEYQG 121 Query: 136 ILNQELVQIIS--NKKIDGLYTYP-MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNA 192 L+ + I+ + ++ F N + + R D+ + G + Sbjct: 122 YLSDAVSDNITTLLARYPQFLIISQRSSFTFRNSDLPVSDIADRLGADFVLEGSQQYDGT 181 Query: 193 VNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 LID + ++ P+DEL + I I V E+ V +A+ Sbjct: 182 HVRTTARLIDGATEASLWADEFDVPLDELLRANSRISRKIANAVG--EKVVDMAEPQMSD 239 Query: 251 KNHYLSDEMLAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLA 309 + A + + F+ +S+ + ++ L + Sbjct: 240 GDVSALLIANAAQSRIMRNFSRDSLLVNIAEQEQSIRDYPNSAWGPLGQALSLRIGLRYG 299 Query: 310 LHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHST 369 E + Q+ +L ++ + +G + + + + F +A + Sbjct: 300 WVEGDE-DAIRQRMDDLARRGVELDPNNFLAFHALGRVLMFNRDVEGAISAFRRAVDLNP 358 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNI 427 + A K EEA I ++P + + + Sbjct: 359 SSSFARNALAQALAFVGKTEEALEEIADIELIDPLYGHDTNWTKARIQWQRGACDEAL 416 >UniRef50_C6W151 TPR repeat-containing protein n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W151_DYAFD Length = 470 Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats. Identities = 51/336 (15%), Positives = 103/336 (30%), Gaps = 13/336 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATN 162 + + + SIA+ PFT N + + + + I ++ GL ++ Sbjct: 1 MSEENQPHGRAAQISIAVLPFTNLSNDPEEEYFSDGVTEEIINVLSRVPGLQVAGRTSSF 60 Query: 163 -FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--EL 219 F N + + ++ D+ + G + + + L+ + I S D ++ Sbjct: 61 VFKNQNTDLQAISTQLHADHILEGSLATSGEQLVITARLVR-PDGSEIWSERYDRDLEDI 119 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQ-DQGYKNHYLSDEMLAGKKELYDF-TPESIYRA 277 + + I IL V A + N L + F + E ++A Sbjct: 120 FDVQEEIAQAILGAVKIELLGEEPAAAFKRYTSNKEAYQHYLRARFYHNKFGSSEEYHKA 179 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + F Q Y +A C++++ + A + Sbjct: 180 IGYF---QAALASDPSYAIAYSGIASCYLNMWFYRHIPAAKALPLMEAATRQALALDASI 236 Query: 338 GKILAIMGLITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 + + + L K + F A + + A L+ AL ++ EA+ Sbjct: 237 AESYLALARMQMLYEWDFKSAAASFRTALELNWNTADLHGQYALFLALTDRPGEAQQEAA 296 Query: 397 KSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 SL LEP +V + K Sbjct: 297 LSLTLEPFSL-INNFYAAYVYWVSARFDLAVAQGRK 331 >UniRef50_B4RFP5 Adenylate cyclase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4RFP5_PHEZH Length = 588 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 48/389 (12%), Positives = 113/389 (29%), Gaps = 16/389 (4%) Query: 77 SLRCIFEKIGYDRCIETIYRKGYRFSGQV---FKTKINEDNTSDYSIAIFPFTTSLNTLD 133 L F +G + + I R + + + + S SI + PF Sbjct: 150 RLPAHFVDLGLQKL-KNIPRPVRAYRVRPGLGAEPPQSLPLPSKPSIVVLPFENRGGDPA 208 Query: 134 PLILNQELVQII--SNKKIDGLYTYPMA-ATNFCNDHISQNSFLSRFKPDYFVTGRINQN 190 L + + I + + + + + + Y + G + + Sbjct: 209 QEYLADAITEDIITALSRWRWFFVIGRNTSFAYKGRTVQAAQVGHDLGVRYILQGAVRRL 268 Query: 191 NAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQ 248 N L EL+DA + + V ++ + + ++ + A+ + Sbjct: 269 NDRLRLTAELVDAATAANLWTERFDGEVSDVLALQDRMTEQLVGALEPAMLHTEGARAGR 328 Query: 249 GYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS 307 + + D G L T E A+ +F + + LA Sbjct: 329 KDLADFDALDCFQRGMWHLNKVTEEGCRTALDLFGQ---AVARDPELALGHVGLARARYG 385 Query: 308 LALHGKSELELAAQKALELLDYVSDI-TTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 LA++G S A +A + D + + + + Sbjct: 386 LAVYGWSPDPKAELQAARAAAAEAIRLDPRDAYGHFAASGAALYLHRHREALDEAKTTIA 445 Query: 367 HSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV--VIKECVDMYVPNPLK 424 + + A ++ V + + +EA +++SL+ P + + + + Sbjct: 446 LNPNFALGHFRLGQVLLYAGRPQEAIGPLERSLRHSPYDPQLGSMLSVLALAHFHAGAYA 505 Query: 425 NNIKLYYKETESESHRVIIDNILKLKQLT 453 + + E + R L ++ Sbjct: 506 EAARHAEEAAERLAPRARAIQAASLVRMG 534 >UniRef50_A6UKN0 Adenylyl cyclase class-3/4/guanylyl cyclase n=6 Tax=Rhizobiaceae RepID=A6UKN0_SINMW Length = 629 Score = 194 bits (494), Expect = 4e-48, Method: Composition-based stats. Identities = 50/345 (14%), Positives = 105/345 (30%), Gaps = 15/345 (4%) Query: 106 FKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-N 162 ++ + S+A+ PF L L + I + +T Sbjct: 205 WQFWPTATVSGKPSVAVLPFDNYGGDEATGRLADGLTEDIITDLARFPEFKVIARNSTET 264 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELH 220 + I + V G I + + +LID+K + S E+ Sbjct: 265 YKGKAIDVREIGKALDVGFVVEGSIAREADRVRVTAQLIDSKQGRHLWSQRWDRPDKEVF 324 Query: 221 NTSQFIIDNILQTVHK----PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 I + I + + S R+A + N + L G + L ++ Sbjct: 325 VIQAEIAEQIANRLGGGAGLVQESGRIAAHRKVPGNLNAYELYLLGTERLEQLDQANLEA 384 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 A+++ + + L H LA G E E A + + Sbjct: 385 ALSLLTQ---AVQSDPGLARGWVELFHTHDLLAGLGI-EPERNRALADAAAERALTLDPS 440 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR-ALVHFHNEKIEEARICI 395 D + A+ G G+ G + +E A + + A + + K E + Sbjct: 441 DPEAHAVYGSSLGMRGDFARAEAEYEAALRMAPNAAEILIFYIGWASTF-GKPERGADLV 499 Query: 396 DKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 ++++QL+P + ++ + ++ + +R Sbjct: 500 ERAIQLDPNYPGWANRPFGLAYFMAGRYPEAVTMFERLGIERHNR 544 >UniRef50_D0DB83 Transcriptional regulator domain protein n=1 Tax=Citreicella sp. SE45 RepID=D0DB83_9RHOB Length = 541 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 60/453 (13%), Positives = 130/453 (28%), Gaps = 48/453 (10%) Query: 22 ILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD--ESLTRCIYSLR 79 L+ + ++ ++ L + + + +W + SL + + LR Sbjct: 11 RLSGPGAPDQLSRRGQAMMAYLSRQPEMRAERAALADLLWSDRAEEQARASLRQELSVLR 70 Query: 80 CIFEK--IGYDRCIE--TIYRKGYRF------------------SGQVFKTKINEDNTSD 117 + + + DR I + + G + + Sbjct: 71 RVLPEGLLAADRQIVRLDVRKVGTDLSGGGRFLEGFDLPSEAFEDWLRQERSAQDAGPQP 130 Query: 118 YSIAIFPFTT-----------SLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNF 163 A P S D +L +V+ I + ++ + +A Sbjct: 131 VHPAGPPPRDSRPGLAVMPFQSYGAPDDEMLAVGVVEDITSALSRVREFHIVARQSAFGL 190 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHN 221 S +R DY V G + Q + + L A++ I + H +D+L + Sbjct: 191 RGGDRDVASVGARLGVDYVVEGSVRQQGQRVRISVHLAAARDGRTIWAEHFDDRIDDLFD 250 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTI 280 I + + R+ +A+ + + L+ + PE +AM Sbjct: 251 LQDRIAALVAGQIAPHLRAAEIARARRRAPEERTAYELTLSALPHFWSHRPEENLKAMRF 310 Query: 281 FDRLQNKSDIQTLKTECYCLLAECH-MSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 R + A CH + AL+L++ + D Sbjct: 311 LSR---ALEHTPDYAPALAYKAWCHAHQCCYLWSEDGHSDRDAALDLIERARPLVQNDAA 367 Query: 340 ILAIMGLITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 L +G ++ + + L ++A + + A + R + +A D+ Sbjct: 368 SLVALGATCSMAANDFEQAAALVDRALLLDPNNAWGWLRRGWNSVYKGDAAQALRDFDQC 427 Query: 399 LQLEPRRRKAV--VIKECVDMYVPNPLKNNIKL 429 +L P + M + L Sbjct: 428 ERLSPLDPFHFNVLFGRSAAMRNLGRFDEAVAL 460 >UniRef50_C8SMN4 TPR repeat-containing protein n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8SMN4_9RHIZ Length = 593 Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats. Identities = 46/349 (13%), Positives = 103/349 (29%), Gaps = 12/349 (3%) Query: 98 GYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYT 155 + + N +IA+ PF + D + + + I L Sbjct: 183 ALMAAIPSVNGRQNVSLKGPPAIAVLPFQSDGGERDVGYMADGIAEDIIYGLSNRRWLSV 242 Query: 156 YPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL 214 ++ F +D + + Y V+G + +N+ L L D N L+ S Sbjct: 243 IAKNSSFQFRDDTLGTRVIGNALGARYIVSGTLMRNDERIRLTTSLADVSNGRLVWSQRF 302 Query: 215 P--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTP 271 + ++ N I I+ + K A+ Q + + G+ + T Sbjct: 303 DRALADIFNLRDEIGAEIVSILDKEVDRAEQARTFQVPWESLETWQLVRRGRWHMNRRTR 362 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 A+ F++ + LA + A + + K + Sbjct: 363 GDTEIALEFFEK---AYREDPNSSAVLNELAWWYFWRAWLRFGDSDD-LDKVKQYSRKAL 418 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + ++D + A +G++ + G+ + E+A + A + A Sbjct: 419 LMDSLDARPHAHLGVMDIMRGRPASAVDHLEEALHINPSFAFAHSAMGSARLLLGDAAGA 478 Query: 392 RICIDKSLQLEPRR--RKAVVIKECVDMYVPNPLKNNIKLYYKETESES 438 ++ +L P R + + + I + + Sbjct: 479 IPFFVETERLSPFDLYRFHNLGELAAAYSFLEDWPSAISTADRSLDLSP 527 >UniRef50_Q02AP4 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AP4_SOLUE Length = 721 Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats. Identities = 46/326 (14%), Positives = 102/326 (31%), Gaps = 16/326 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA-TNFCNDHISQNSFLSRF 177 A+ PF + + L + I + I GL + F + Sbjct: 268 AVLPFANLSPDKENEYFSDGLTEEIISALSHIPGLKVIARTSAFAFKGRNEDVRRIADTL 327 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVH 235 + + G + ++ + ELI+A + S ++++ I I +T+ Sbjct: 328 GVTHMLEGSVRRSANRIRVTAELINACDGSHQWSERYDRQLEDVFAVQDEIAVAIARTL- 386 Query: 236 KPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 ++LA + + +++L + L ++P++ + + Sbjct: 387 ----RMKLAAAPRAHTPKLAAYEQLLMARHYLGKWSPDAAAKGQECLKH---AIALDPSF 439 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 C LA L + AA + I + A++G + L Sbjct: 440 AVARCELAWFLFVLVSENRLSPSEAAALMKTEAEEALTIDPSLPEAHAVLGAVAVLDYNW 499 Query: 355 KVSHILFEQAKIHSTDIASLYYYRA-LVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + FE A S+ + + ++ EA ID+ L +P IK Sbjct: 500 AEAGRRFELAMSRDPIQPSVRGFYSLFYLAPMGRLREAEEQIDRLLNEDPLNLFWGNIK- 558 Query: 414 CVDMYVPNPLKNNIKLYYKETESESH 439 ++ + + + E + + Sbjct: 559 GDYLWATGRAEESEARQKQVLELDPN 584 Score = 41.6 bits (96), Expect = 0.055, Method: Composition-based stats. Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 6/89 (6%) Query: 308 LALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIH 367 L G++E A QK V ++ +G + + + E+A Sbjct: 562 LWATGRAEESEARQK------QVLELDPNYWLPYGWLGAQYLAEDRIAEALEMLERAHSL 615 Query: 368 STDIASLYYYRALVHFHNEKIEEARICID 396 + +L + A + A+ ++ Sbjct: 616 AGWNPALAGWLAGLLDRTGNKARAQAVVE 644 >UniRef50_B8KJR3 TPR repeat-containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KJR3_9GAMM Length = 714 Score = 191 bits (484), Expect = 6e-47, Method: Composition-based stats. Identities = 46/306 (15%), Positives = 91/306 (29%), Gaps = 15/306 (4%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIISN--KKIDGLYTYPMAA-TNFCNDHISQNSF 173 SIA+ PF D + + + N ++ GL + F Sbjct: 138 QPSIAVLPFVDMSPDGDQEYFADGIAEELLNVFAQVKGLSVAGRTSAFAFKGKSTDLREI 197 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNIL 231 + + G + + + +LI A N + + S + ++ I IL Sbjct: 198 AQILDVGHILEGSVRKAGNQIRVTAQLIQADNGYHLWSATYDGELTDIFGVQDSIAKAIL 257 Query: 232 QTVHKPERSVRLAKQDQGYKNHYL---SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 Q + + + D L K+ D T + + A DR Sbjct: 258 QELTPQLLGEDKELSSKVRVSATDLDAYDLYLISKQHASDGTLKGLQAAAGALDR---AI 314 Query: 289 DIQTLKTECYCLLAECHMSLA----LHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 +I A + ++ G E A +A +D DI L + Sbjct: 315 EIDPNYVPALVWRAYYELQMSDGEGAWGNIPFEEALPRAKRWIDRAIDIDPESPDALFGL 374 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 G + + + + A + A K++E + ++++L +P Sbjct: 375 ASYFGYTNNDEAAVRYYRAAIDVKPNFPVAQNDLAFFLASEGKVKEGVVYLEQALAHDPA 434 Query: 405 RRKAVV 410 A + Sbjct: 435 YVDANL 440 >UniRef50_A4ABU3 Adenylate/guanylate cyclase protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABU3_9GAMM Length = 728 Score = 191 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 50/333 (15%), Positives = 110/333 (33%), Gaps = 13/333 (3%) Query: 116 SDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNS 172 SIA+ PF D L + + +I L ++ F + S Sbjct: 136 PPNSIAVLPFADISQQRDQEFLGDGISDTVMHVLSQIADLSVTARTSSFAFKGQNRSVTE 195 Query: 173 FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHNTSQFIIDNI 230 S + + G + + + LIDA+ + S +D + I + Sbjct: 196 IASMLAVAHVLEGSVQRAGDKVRIIARLIDARVGTEVWSGYYDRTLDSIFAIQDEIAREV 255 Query: 231 LQTVHKPE-RSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 + K ++ D Y+ ++ + GK+++ + + A +F Q Sbjct: 256 ATALTKEVLKTGETQLVDNAYRPDLEAYEKFILGKQQMEQQSRPAAENAKRLF---QEAI 312 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 DI Y +LA A G + A EL+ D+ + + L+ Sbjct: 313 DIDPNYAMAYVMLANAQYQSA--GMQGRQAMILSASELVAEALDLDPQLAEAHGMSALLL 370 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 L + + ++A A Y A + + + A I K+++L+P+ + Sbjct: 371 SLQKRNAEARAAVDRAIELRPSYARAYATLASLLYAEADFDGALAQIRKAIELDPQE-DS 429 Query: 409 VVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 ++ ++ + + + + + + Sbjct: 430 FRLQLARSLWSVSRAEEAVAMVKESIKRNPGNP 462 >UniRef50_Q89CU8 Bll7697 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89CU8_BRAJA Length = 393 Score = 191 bits (484), Expect = 7e-47, Method: Composition-based stats. Identities = 48/336 (14%), Positives = 99/336 (29%), Gaps = 13/336 (3%) Query: 122 IFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 + PFT S L A + I + Sbjct: 1 MLPFTNLSGDPGQDYFAHGRPDNRSLANSGQLRIARNTAFTYKGKSIDARQIGRELGVRF 60 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPER 239 + G + + + +LID + + S+ I I +T+ Sbjct: 61 ALEGSVQRVGDQVRVNAQLIDTETGGHVWSDRFDRLRSNYLELQDDITGRIARTLGLELV 120 Query: 240 SVRLAKQDQGYKNHY-LSDEMLAGKKELYDF-TPESIYRAMTIFDRLQNKSDIQTLKTEC 297 + + ++ + SD L G +Y TPE+ A +F+ +I Sbjct: 121 VLAARSIELEHQTNPTASDLALQGWAAVYKPTTPETREEARRLFEH---ALEIDPHTLRA 177 Query: 298 YCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 L+ +L ++G+S +A EL + + A+ + K Sbjct: 178 MTGLSLTLANLVINGQSPDPAGDLSRADELSQQAVGLDPNNAAAHALRARALQAQRRQKE 237 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 + + + + +IA+ + K +A D++++L PR + Sbjct: 238 AAEQYRISLQINGNIATTTLFLGETFVFTGKSLDAIPLFDRAIELSPRDPGLGTWQ---- 293 Query: 417 MYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 + ++ + S V + L QL Sbjct: 294 -FEMGRAMILLRRDDEALTWLSRSVATNPRLAYGQL 328 >UniRef50_B1M705 Adenylate/guanylate cyclase with TPR repeats n=8 Tax=Methylobacterium RepID=B1M705_METRJ Length = 658 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 45/309 (14%), Positives = 97/309 (31%), Gaps = 11/309 (3%) Query: 124 PFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMA-ATNFCNDHISQNSFLSRFKPD 180 PF + + L + ++ + G + A + N + Sbjct: 259 PFANLSSDPEQEFFADGLTEDLTTDLSHLAGSFVIARNTAFTYKNKPVDVRQLGRDLGVR 318 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE--LHNTSQFIIDNILQTVHKPE 238 Y + G + + N L +LI+ + I S+ + + + + +++ Sbjct: 319 YVLEGSVRRANDKILLNAQLIETEAGSAIWSDRFEGERSRVGEIQTEFVARLARSLDVQL 378 Query: 239 RSVRLAKQDQGYKNHYL-SDEMLAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + + N+ SD + G L TPE+ ++ F+ I Sbjct: 379 MRAESLRSLRERPNNPDASDLAMRGWAALNRIRTPENTRDGISYFEH---ALTIDKDLPS 435 Query: 297 CYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAK 355 LA LA G S + + +A +++ + I G + Q Sbjct: 436 AQLGLARALSVLAGSGWSSDRQADVSRADDIVTPFLLANPTNALAHYIKGGVYRTRKQFD 495 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 + +QA + + A Y LV N + +E K+++L P+ + Sbjct: 496 QATAELDQAIFYDPNFADAYDQAGLVRLLNGQSKEIFPFSMKAIRLSPQDPYVGYWTFHI 555 Query: 416 DMYVPNPLK 424 + + Sbjct: 556 CHRHSHLAQ 564 >UniRef50_Q89CQ9 Blr7737 protein n=5 Tax=Bradyrhizobium RepID=Q89CQ9_BRAJA Length = 619 Score = 190 bits (483), Expect = 8e-47, Method: Composition-based stats. Identities = 37/353 (10%), Positives = 92/353 (26%), Gaps = 11/353 (3%) Query: 95 YRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDG 152 + ++ + + + PF + L + + + Sbjct: 190 PEGARAIAPELREASALSQQYRTAIVGVLPFANLS-DAQDEYFSDGLTEDLIHALSLQSF 248 Query: 153 LYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS 211 +T F + S Y + G + + A + ELI + + + Sbjct: 249 YRVLSRNSTFAFKGKNTSTRLIAREIDATYLIQGSVRRAGAKIRVTAELIAPETGEQLWT 308 Query: 212 NHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDF 269 D + I N+ + + + + D L G Y Sbjct: 309 GRYDRDIGDFFAMQDEITTNLSAAIATEIVRAEASAPARLSTDVTAWDRFLKGLSHYYRQ 368 Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK-SELELAAQKALELLD 328 T E + A+ +F + + + + LA + G +A+ L + Sbjct: 369 TKEDLAAAIDLF---REAIAVDPKLSIAHAYLATIQIQSIQFGWVKGTREMWAEAMNLAE 425 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 + +I+ + G + + ++A + + HF + Sbjct: 426 TSVRLDPRSSFAFSILSWAHAMEGHYEAAMDAAKRAVALNPYDNGARGVLGICHFVIGEH 485 Query: 389 EEARICIDKSLQLEPRRRKAVVIKE-CVDMYVPNPLKNNIKLYYKETESESHR 440 EA + Q + + Y+ + ++ + Sbjct: 486 REAIELFSMAAQRDNSDPRYQWAALNAFSHYLLGQYDATLSWAREQLYINPNH 538 >UniRef50_C3ME30 Adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3ME30_RHISN Length = 674 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 48/306 (15%), Positives = 102/306 (33%), Gaps = 10/306 (3%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQ 170 + SIA+ PF D L + L + + + +T + Sbjct: 277 ETDFRISIAVLPFLRPAEDADQSFLAEGLAEDLITELSRHKDFLVIARQSTLALDPEPRH 336 Query: 171 NS-FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNTSQFII 227 Y +TG + + +L ++L+D + + ++E+ + I+ Sbjct: 337 AEHAARALDVRYVLTGNLRRRGEDLSLGVQLVDTATHRTVWAERYTRKLEEIFAVQEEIV 396 Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQN 286 I+ V RS + + + G +Y+F+ + I A F R Sbjct: 397 GLIITAVDAEVRSSERERALRKLPETMDAWELFHRGLWHVYNFSIDQIEAAEECFRR--- 453 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILAIMG 345 + + + LA+ + + SE + L + + ++G Sbjct: 454 ATVLHPRFALGHAGLAQAAVVRIVWQMSEDIPATLESGLAHARHAVALDGAHPYPHVMLG 513 Query: 346 LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRR 405 + G+ ++H A + A +Y A VH + + EA ID++++ PR Sbjct: 514 RLLTCQGELGLAHDHLRIAIELNPSYAHAFYALAQVHIWSGRPGEALSYIDRAIRFSPRD 573 Query: 406 RKAVVI 411 + Sbjct: 574 PLLSMF 579 >UniRef50_D0CP82 Transcriptional regulator domain protein n=4 Tax=Rhodobacteraceae RepID=D0CP82_9RHOB Length = 452 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 56/360 (15%), Positives = 129/360 (35%), Gaps = 18/360 (5%) Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCND 166 + + S+A+ PF + + + + + I + ++ +T + Sbjct: 50 PHVHWEARPSLAVLPFRDLQGSDEDRYFGEGITEDIVTGVSRSRAIFVVARTSTLQMTKE 109 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQ 224 + + Y +TG I ++ + ++ EL+D + +++ D ++ Sbjct: 110 SMPSREVAAALGVKYLLTGSIRRSGNLLRIHTELVDVVRNRAVWADNFDGDTADIFTFQD 169 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDR 283 I+ +I+ TV +S A D +L G ELY F +S AM++F R Sbjct: 170 HIVSSIVATVEPSVQSAEAANLVTRPTESLDAYDCVLRGLPELYRFEGQSYETAMSLFRR 229 Query: 284 LQNKSDIQTLKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 ++ + + + LA C + +A S ++ + A+ ++ D L+ Sbjct: 230 ---AVELDSGYAQAHSYLAWCLNFWIAEGKSSNVDRDSATAVFHARKGVELDPEDALNLS 286 Query: 343 IMGLIT-GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 I G I L + + + +QA + ++ + A H + AR + +L Sbjct: 287 IRGHILSLLEHRPHEAVDIMDQALSLNPNLPLAWGISATAHAYLGNGAIAREHMLNVWRL 346 Query: 402 EPRRRKAVVI--KECVDMYVPNPLKNNIKLYYKETESESH-----RVIIDNILKLKQLTR 454 P + +V I+ + ++ R++ + Q+ + Sbjct: 347 TPFGPLNFFFWTAVGLAEFVDGDYPEAIRALQRARRTKPRFMAALRLLAASYALDGQIEQ 406 >UniRef50_Q1IJ33 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ33_ACIBL Length = 769 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 44/352 (12%), Positives = 102/352 (28%), Gaps = 14/352 (3%) Query: 86 GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII 145 G + I+ + ++S S+A+ P D ++ + + I Sbjct: 318 GAVALLLIIFSSIAWQRSHDAAKQTAATSSSKPSVAVLPLKNLSGDGDNNYFSEGMTEEI 377 Query: 146 S--NKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELID 202 + KI + ++ S Y + G + + + ++LID Sbjct: 378 TTKLSKIQAINVASHSSVVAAKTADKSATDIGKALNVRYVLEGSVRKAGNEVRINVQLID 437 Query: 203 AKNLFLIASNHLPVD--ELHNTSQFIIDNILQTV-HKPERSVRLAKQDQGYKNHYLSDEM 259 A N F + ++ + ++ + + I Q++ K A Q + N D Sbjct: 438 AANGFQVWADDFTGEMKDVFSLQEQTAMKIAQSLNLKLSPQEEQAIQHRATDNPQAYDAY 497 Query: 260 LAGKKELYDF-TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL 318 L G F + +++ A F+ L+ L + +S+ + Sbjct: 498 LRGSALTNTFDSKDALEGARKNFE---EALKYDANYPPAVAGLSWVEAQLYRNVESDPKH 554 Query: 319 AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR 378 + A + + +G I + + F +A + D Sbjct: 555 -LELAEKYGQKALQLAPDAADTHLAIGSIAAIKYDYNTAAREFRRATELAPDSGYASDLL 613 Query: 379 ALVHFHN--EKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIK 428 + + A K+L+L+ + ++ Sbjct: 614 SWALSYQIPPDPIGAEAAARKALRLQ-ASIYPAYYHLGRALIAQGRYSEALE 664 >UniRef50_A5CFV3 Putative adenylate/guanylate cyclase protein n=1 Tax=uncultured marine microorganism RepID=A5CFV3_9ZZZZ Length = 743 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 42/328 (12%), Positives = 105/328 (32%), Gaps = 21/328 (6%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 A+ PF + D + + + I+ L + + + + Sbjct: 133 AVLPFESRSADPDNVFFADGIHDDLLTMLGNINSLRVISRTSVMEYRDTKKNMRKIGEEL 192 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD----ELHNTSQFIIDNILQT 233 + G + + + ++LID + + + I I Sbjct: 193 GVTTILEGAVQKAGDNVRINVQLIDTNADQHLWAQSYDRQLTTNNIFAIQSEISAAIASA 252 Query: 234 VHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQT 292 + A+ D + + L G+ +Y +++ +A F+R ++ Sbjct: 253 LQATLTPEESARLDSVPTENLEAYNLCLVGRNNIYSRRLDNLQQARQQFER---AIELDP 309 Query: 293 LKTECYCLLAEC-HMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 + Y L++ + L+ H + A + LD + + D I A +GL Sbjct: 310 NYAKAYSGLSDSVMLILSNHKAISTDEAFPISELALDKAVALDSSDADIYASVGLYKMEL 369 Query: 352 GQ-------AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 + +H FE+A + + ++A + + ++ +++++L+P Sbjct: 370 WKSQVDKSARDAAHEAFERALKINPNHVQALMWQA-SLYDESETSKSIELYERAIELDPL 428 Query: 405 RRKAVVIKECVDMYVPNPLKNNIKLYYK 432 + I V ++ + K Sbjct: 429 -ARVPQINLGVQYAHLGQNDAALRQWLK 455 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 18/136 (13%), Positives = 41/136 (30%), Gaps = 13/136 (9%) Query: 267 YDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALEL 326 + A F+R I + A + E K++EL Sbjct: 372 SQVDKSARDAAHEAFER---ALKINPNHVQALMWQASLY----------DESETSKSIEL 418 Query: 327 LDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNE 386 + ++ + +G+ GQ + + + D + Y A+ Sbjct: 419 YERAIELDPLARVPQINLGVQYAHLGQNDAALRQWLKTIDLHPDWPAPYTTVAIHLAGLG 478 Query: 387 KIEEARICIDKSLQLE 402 +++E+ K+ +L Sbjct: 479 RLDESMAWFKKAGELS 494 Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats. Identities = 23/211 (10%), Positives = 65/211 (30%), Gaps = 19/211 (9%) Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 V K R ++ K + + L + + +++ +++R ++ Sbjct: 374 VDKSARDAAHEAFERALKINPNHVQAL--MWQASLYDESETSKSIELYER---AIELDP- 427 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 + + ++ + + + A ++ L D+ + + G+ Sbjct: 428 ----LARVPQINLGVQYAHLGQNDAALRQWL----KTIDLHPDWPAPYTTVAIHLAGLGR 479 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 S F++A STD +V+ + E ID ++ P ++ + Sbjct: 480 LDESMAWFKKAGELSTDPLDSVNAI-MVYLDLGQPEVVGPMID-AI---PDSHPLFMLAQ 534 Query: 414 CVDMYVPNPLKNNIKLYYKETESESHRVIID 444 + ++ +E E + Sbjct: 535 AHKLQFEKDYAGASEILMQEIEQMERPPTLM 565 >UniRef50_B7RXI6 Tetratricopeptide repeat domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RXI6_9GAMM Length = 642 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 48/319 (15%), Positives = 104/319 (32%), Gaps = 13/319 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCND-HISQNSFLSRF 177 A+ PFT + D L + I + L ++ + D + + Sbjct: 121 AVMPFTNFSDNKDMGYFGDGLAEEILNLLANLRELNVSARTSSFYFKDRTVDIPTIARHL 180 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVH 235 + + G + + + +LIDA+ F I S+ D + I +++ + Sbjct: 181 GVRHVLEGSVRFDGDRVRVTAQLIDAEKGFHIWSDSYDRDMSNIFTLQDEIAGEVVKNLE 240 Query: 236 KPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYD-FTPESIYRAMTIFDRLQNKSDIQTL 293 S + D L G+ L E++ RA +F R +I Sbjct: 241 IVLSSSSKGVLARKVSLDPDAYDRYLRGRDYLRQPHDDETLSRAELMFQR---ALEIAPD 297 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 + Y L + + L AA + + + + + +G + SGQ Sbjct: 298 YADAYAGLCDTLLLWYLVDMDASRFAASE--DACLQAQTLDSRAPTVHVALGNLYRGSGQ 355 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 ++ F +A +T Y + K+ A + ++++L+P + Sbjct: 356 YALAEREFNEAISLNTSGVDAYVGLSQTFAAAGKLALAEQTLVRAIELQPNNWSVSMAM- 414 Query: 414 CVDMYVPNPLKNNIKLYYK 432 + ++ I + + Sbjct: 415 GKYLVNIGRVEEAISYFER 433 Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 65/226 (28%), Gaps = 18/226 (7%) Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 + + + ER L + N+ S L G+ A +++ Sbjct: 422 GRVEEAISYFERIDSLLPESGAAANNLGSAFFLTGR----------FEDAAEAWEQ---A 468 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + Y L + L E +K L+L ++ G L G Sbjct: 469 IARTPT-VDIYANLGASYF--FLQRFDEAATMYRKGLDLAPKHFEMWGNYGDALMAAGAP 525 Query: 348 TGLSGQ-AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 + ++ L E+ + A + EEA + +L+L + Sbjct: 526 DDERARAYLRAYELAEENLRINPSDAITLSLIGHYLARLGRDEEALKNVKLALELAQKDI 585 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 + + N L + + + ++D + L+ L Sbjct: 586 YVYYFSA-ITLSTLNELDRAQQAADEALALGYPQFMLDADIGLQPL 630 >UniRef50_Q1IRP3 Serine/threonine protein kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IRP3_ACIBL Length = 821 Score = 187 bits (475), Expect = 7e-46, Method: Composition-based stats. Identities = 52/330 (15%), Positives = 103/330 (31%), Gaps = 12/330 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT- 161 F SIA+ PF + N L+ L + S ++ + + Sbjct: 343 YFFRGSAVSTQQVTSIAVLPFVNATNDAANEYLSDGLTGELISSLSQLPNMKVMARSTVF 402 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDEL 219 F K +TGRI Q + +L++A + I H +L Sbjct: 403 RFKGKQDDPQQIGQTLKVAAVLTGRITQRGDTMGIDADLVNASDGSEIWGAHYDRKASDL 462 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAM 278 I ++ + K ++ + L G++E TPE + +++ Sbjct: 463 TQVQGDISRDLSNKLKIQVGGADQQKFGSAGTSNPEAYRLYLEGRQEWNGRTPEGLKKSI 522 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVD 337 ++ R Y LA+ ++ +G + A + ++ Sbjct: 523 DLYRR---AIAADPNYALAYTGLADTYLVATSYGVGITQQQALSVVDDASKKALELDPTL 579 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRAL-VHFHNEKIEEARICID 396 + A + + + LF + S A+ +Y+ A V KI+EA Sbjct: 580 PEAEATRAMALANQWKFTEAEQLFRKTLQRSPGNANAHYFFAFNVLLPIGKIDEALAEFR 639 Query: 397 KSLQLEPRRRKAVVIKECVDMYVPNPLKNN 426 +L L+P + + + V Sbjct: 640 TALSLDPLSTVMNMNYA-ITLAVARRYDET 668 >UniRef50_Q1ITM5 Serine/threonine protein kinase with TPR repeats n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ITM5_ACIBL Length = 757 Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats. Identities = 53/389 (13%), Positives = 126/389 (32%), Gaps = 29/389 (7%) Query: 73 RCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTL 132 + LR +++ D IE+ K G + S+A+ F Sbjct: 294 QSAAELRADLKRLKRD--IES--SKRSAAGGSSTSVASAPAQSKQKSVAVLYFANQSGAK 349 Query: 133 DPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + + + I KI L +P + F + ++ + Y + G I + Sbjct: 350 EDEYFRDGITEDIVTELSKIAQLEIFPRSEVLAFRDQPVTAQQVGQKLGAGYVLEGSIRR 409 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQD 247 + ++L++ + ++++ + I +I Q + Sbjct: 410 AGNRVRITVQLVEVSTRHSAWAERYDRQLEDVFAIQEEIARSIAQALRITLTPQEEKTIA 469 Query: 248 QGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + + D L G+ E A+ +F+ + + + + + Sbjct: 470 KKPTENPQAYDFYLRGRSYTRR---EKFDYALQMFEHV---IQLDPNFALAHAGIGQICG 523 Query: 307 SLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 + + + + + L D + + +L ++ + + + +L ++A Sbjct: 524 LMFEL-REQNQKWIDRGLAACDRATALAPDLPDVLVARARVSYAQKKYEEAALLAQRAVE 582 Query: 367 HSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNN 426 D + +F + + E A K+++ D P N Sbjct: 583 RKPDAEGSWDIMGRAYFASGQFEAAAAISKKAIEFN-----------GDDYNTYLPFINT 631 Query: 427 IKLYYKETESESHRVIIDNILKLKQLTRI 455 + +E E+E RV I N+L+ +QL R+ Sbjct: 632 MHRLGREDEAEELRVGIINVLR-QQLERV 659 Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 15/100 (15%), Positives = 29/100 (29%), Gaps = 1/100 (1%) Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS-GQAKVSH 358 L + L + E E + +L + D + ++ G + Sbjct: 625 YLPFINTMHRLGREDEAEELRVGIINVLRQQLERVPEDVRARILLAATLAERRGDEDEAM 684 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 A S A+ Y A + +EA + K+ Sbjct: 685 SHLRTAIALSPGDANTLYNAACTYGILGNKQEALDALKKA 724 >UniRef50_A7HAK8 Protein kinase n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HAK8_ANADF Length = 784 Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats. Identities = 51/351 (14%), Positives = 118/351 (33%), Gaps = 16/351 (4%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQN 171 S SIA+ PF D + L + I + +I+GL+ ++ +F Sbjct: 328 PSAPSIAVMPFADLSPEKDQEYFSDGLAEEILNALARIEGLHVAGRTSSFSFKGKTDDVA 387 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDN 229 + ++ + G + + + + +L+D KN + + S + ++ + I + Sbjct: 388 AIAAKLHVTSLLEGSVRKAGSRVRITAQLLDTKNGYHLWSQTYDRELTDVFVVQEDIARS 447 Query: 230 ILQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKS 288 +++ + K + +G N D L G++ +P S RA+ F+R Sbjct: 448 VVEALRAKLVPAATARISARGTANAAAYDHYLIGRELRRHPSPGSWRRAIAAFER---AV 504 Query: 289 DIQTLKTECYCLLAECHMSLA--LHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 + + L A E++ ++A E ++ + G+ A+ G Sbjct: 505 ALDPGYASGWAELGNAWFWYANERSRIEEVDDGKRRAAEAVERAIALAPTLGEAYAVRGT 564 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHF-HNEKIEEARICIDKSLQLEPRR 405 I + + ++A + A +Y+ R + + A + ++ L+P Sbjct: 565 IRAAEQRWSEALADMDRAVSLNPGSADVYWLRGQFLLGPLGRYDAAVEDMRRTADLDPLW 624 Query: 406 R----KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 D + +I+ +L + Sbjct: 625 PLAWGGLGAALLARDERAEALRMFERAVELNPGADIGRHMIVVTLLLDGRA 675 >UniRef50_Q01NG0 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NG0_SOLUE Length = 885 Score = 184 bits (466), Expect = 8e-45, Method: Composition-based stats. Identities = 48/337 (14%), Positives = 105/337 (31%), Gaps = 13/337 (3%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATN-FCNDHISQNSFLSRF 177 A+ P + + + +I GL + + + Sbjct: 432 AVLPLENLSGGREQDYFADGITDALISDLAQIHGLRVISRTSVMSYKGVSRRLPAIARTL 491 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVH 235 G + + + + L++A + S + ++ + I + Sbjct: 492 GVQTIAEGSVLRAGNHVRIAVRLVEASKDSPVWSGSYEGELRDVLTVQNQVAAAIAGEIR 551 Query: 236 KPERSVRLAKQDQGYKNHY-LSDEMLAGKK-ELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + A+ + + DE L G+ L +FT ES RA+ F + + Sbjct: 552 VALAAPDRARLSRHQRVDLVAYDEFLKGRHDYLAEFTRESADRAIAHFHQ---ALKLDPS 608 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG- 352 Y LA+C+ ++ + E KA + G+ A + L+ L Sbjct: 609 YAPAYAGLADCYYMVSSMYYAPAE-VMPKAKTAALKALQLDDTLGEAHATLALVQSLFEF 667 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + F +A A ++ + +L + +EA ++++ +L+P Sbjct: 668 NRAAAERGFRRAIELKPGDAQVHLWYSLHLAGLGRFDEAAAEVEEAQKLDPVSPAIN-AY 726 Query: 413 ECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 +Y+ + I+ E+ V L L Sbjct: 727 AGPPLYLAHRYDQAIQRMQPVAETFPDYVHPHAWLAL 763 >UniRef50_B6B7E9 Adenylate cyclase Cya3 n=1 Tax=Rhodobacterales bacterium Y4I RepID=B6B7E9_9RHOB Length = 582 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 60/386 (15%), Positives = 131/386 (33%), Gaps = 17/386 (4%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETI--YRKGYRFSGQVFKTKINEDNTSDYS 119 I +S + + F+ +G + + I + YR +G E + + S Sbjct: 132 GEICISGTVHEQVRGRVGAAFDDLGLQQ-VRNIAEPVRIYRITGNSLPALDPEGPSPEAS 190 Query: 120 IAIFPFTTSLNT-LDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSFLS 175 +A+ PF ++ + + Q L + I+ + L A F + + Sbjct: 191 VAVLPFASASPANTETEAMAQTLTEDITIGLSRFRALRVVSRTAALRFAGSTAGTSIVAA 250 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNT--SQFIIDNILQT 233 Y G I Q + + L D + + S D ++ + I QT Sbjct: 251 ELGVRYLAEGSIRQLPGRLRITVTLSDGASGLSLWSGRYDRDLSNDLTQQDALAAQITQT 310 Query: 234 VHKPERSVRL---AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + +S+ A Q D ++ K + D + + + T++ + + Sbjct: 311 LATQLQSIARQKSAAQAAKRGALTARDLVMQAKSVILD-SRGRLKQCRTLYQQACDA--- 366 Query: 291 QTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 Y LA ++ + G + +L KA LL + + I +D + ++ Sbjct: 367 DFGNAAAYSGLALTYLVEWMSGWATSADLTLDKAFPLLRHAARIDPLDSVAQRRLAVMHL 426 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV 409 G ++ F++A + + + +R L + + E+A +D++ P Sbjct: 427 CKGNFTLAEDHFQRALMLNPNDTDAMAFRGLSLIYQGRPEKALAELDQATAQNPFHPTYF 486 Query: 410 VIKECVDMYVPNPLKNNIKLYYKETE 435 + +Y+ + K E Sbjct: 487 HWFRGLALYMCRAYDPAVSEVSKAIE 512 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 17/179 (9%), Positives = 46/179 (25%), Gaps = 18/179 (10%) Query: 224 QFIIDNILQTVHKPERSVRLAK--QDQGYKNHYLSD--EMLAGKKELYDFTPESIYRAMT 279 + L +H + + LA+ + + G +Y PE +A+ Sbjct: 414 DSVAQRRLAVMHLCKGNFTLAEDHFQRALMLNPNDTDAMAFRGLSLIYQGRPE---KALA 470 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 D+ ++ + LA A A+ + ++ Sbjct: 471 ELDQATAQNPFHPTYFHWFRGLALYMC-----------RAYDPAVSEVSKAIELFPGFPA 519 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + G + + + + + L + +E + ++ Sbjct: 520 PHRHLAACYAQLGNRPAAARECGRILELEPEFSVARVSKTLPFARAQDLEHYCEGLRQA 578 >UniRef50_Q0ASW3 TPR repeat-containing protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASW3_MARMM Length = 644 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 39/343 (11%), Positives = 105/343 (30%), Gaps = 16/343 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSFLSRF 177 A+ PF D + + I ++DGL+ + F D Sbjct: 166 AVLPFADLSPAGDQAYFGDGMAEEILNVLTRVDGLHVASRTSAFQFRGDTTGIPDIARAL 225 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP----VDELHNTSQFIIDNILQT 233 + V G + ++ + +LID++ + S+ + + I + I+Q Sbjct: 226 NVRHVVEGSVRKSGDQLRITAQLIDSEGDRHLWSDTFDRPLTAENVFAIQDDIANEIVQA 285 Query: 234 V--HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + + + D L + + + +++ +++ +R + Sbjct: 286 LSQALDLDGLESVAIESDTGDLDAYDLFLQAQAIFFARSSDNVLEGISLLER---AVTVD 342 Query: 292 TLKTECYCLL-AECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITG 349 + LL A ++ + +++ A + D +++ +I + Sbjct: 343 PRFARAWALLAAFNSVTPSWIDTRDMDRDFIALAQDAADRATELNPALALPYSIRSNLLA 402 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV 409 S + + A + A+++Y+R + + + + A L ++P Sbjct: 403 ASADWEAAMAQANAAVEREPETANVWYFRGGISLNVGQFDAAAADYQTCLDIDPAYHICR 462 Query: 410 VIKECVDMYV--PNPLKNNIKLYYKETESESHRVIIDNILKLK 450 ++Y + V+ L Sbjct: 463 RYLAFAELYRGNTRRATELFAEGMVAGQESLLSVVAPAYFALG 505 >UniRef50_Q98JC9 Adenylate cyclase n=1 Tax=Mesorhizobium loti RepID=Q98JC9_RHILO Length = 485 Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats. Identities = 48/395 (12%), Positives = 117/395 (29%), Gaps = 19/395 (4%) Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 ++ ++ + S+ I + +AIFP Sbjct: 45 FIAPSTVRTHLASIYDKLGVRNKVALASHINGAIGA-----GMDGPPRLPGASPVLAIFP 99 Query: 125 FTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHI-SQNSFLSRFKPDY 181 + L I+ + L + Y Sbjct: 100 IECQTSEERWRRFADGLSSDITIDLARYADLPVIAFHTMKSLGSKPADFAADGKALGATY 159 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPER 239 V+G++ + L IEL DA N + S V+++ + + ++ + Sbjct: 160 VVSGQLRADERRVRLSIELADADNGVSLWSERYDRQVEDIFALQDSLTETVINVIAGSYG 219 Query: 240 SV----RLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 ++ R A + + + D L G ++ F+ I A+ +F R ++ Sbjct: 220 ALATVGRKAIRRKPPASLRAYDCYLLGVEQQDTFSRAGIAEAIRLFSR---ALELDPTLV 276 Query: 296 ECYCLLAECHMSLALHGKSELEL-AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 + LA + +G + + + ++ + +D +G + G G Sbjct: 277 RAWTALAYAYSIEGANGFGDDAQVSIENWRTAVENAILLDPMDSVACNCLGDLRGCLGDL 336 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFH-NEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + + + +A + ++ A A EA I++++ L P Sbjct: 337 EGAERAYRRAFEYGSNHADTLAMLAGSKALVAGDPAEAMPLIERAMHLNPLAPPWYFGML 396 Query: 414 CVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 ++ + I + T + + ++ + Sbjct: 397 GRILFTLGRHREAIAALCRSTLNSPNVLLFLALAH 431 >UniRef50_B8KPN2 TPR repeat-containing protein n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KPN2_9GAMM Length = 743 Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 91/309 (29%), Gaps = 13/309 (4%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDH 167 + SIA+ PF D + + + K+ G+ ++ F + Sbjct: 139 QPPAGNVASIAVLPFADLSAAGDQEYFADGISEELLNVLAKVKGMQVAGRTSSFAFKGRN 198 Query: 168 ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQF 225 + G + + +LI + F + S D + Sbjct: 199 EDLREIGRVLNVANILEGSVRTEGDKVRVTAQLIQVSDGFHLWSETYDRDLTSIFAVQDD 258 Query: 226 IIDNILQTVHKPERSVRLAKQDQGYKNH-YLSDEMLAGKKELYDFTPESIYRAMTIFDRL 284 I IL + + + L + + + RA + D+ Sbjct: 259 IAQQILTAMKTELQIDVQDAITPATRTDINAYGLFLEARDLIASRDVAKMTRARALLDQ- 317 Query: 285 QNKSDIQTLKTECYCLLAECHMSLA----LHGKSELELAAQKALELLDYVSDITTVDGKI 340 I Y A+ H+ L+ +G ++ KA+ ++ ++ Sbjct: 318 --AITIDPAYAPAYAARAQVHLLLSDRPSSYGDIPHHVSRPKAVADVEKALELDPDLAHA 375 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 A+ GL+ G+ + +A + + + AL + A ++ L Sbjct: 376 HAVQGLLDNDEGRPDAARASLRRALELNPNSLDARNWLALALVDTGEFRAALEQLNALLA 435 Query: 401 LEPRRRKAV 409 ++P AV Sbjct: 436 IDPLYGPAV 444 >UniRef50_Q7NLM6 Serine/threonine protein kinase n=1 Tax=Gloeobacter violaceus RepID=Q7NLM6_GLOVI Length = 913 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 31/300 (10%), Positives = 84/300 (28%), Gaps = 15/300 (5%) Query: 127 TSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVT 184 + + L L ++ K+ L A D S +T Sbjct: 406 SERGSTGDERLADGLTLSLTTHLGKVAALTVISDRAAMQYRDS-SLAQIGGDLGATGVLT 464 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVR 242 G + ++ + L+D ++ + + + ++ + I + Sbjct: 465 GSVLRSGERVRIAARLVDPRSGTQLWAEQYDRKLQDIFAIQTEVAQRIAAAMKAKLTPEE 524 Query: 243 LAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 + + N L G++ FT + A+ F + + L Sbjct: 525 KIRLARAPAQNAMAYQYYLRGREYNNRFTVKDNEYAIGFFKQ---ALALDPDFALARSGL 581 Query: 302 AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT--GLSGQAKVSHI 359 A +++ ++G + A + + + M + Sbjct: 582 AVGYLNRFIYGG--KVSWREAACREAGRAVALESGLAEAHNAMAACYSQMELRLQPQAMA 639 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 + +A + + S Y + + +++E + K++++ P + Y Sbjct: 640 EYRRAIDLNPNFFSAMYNYSAILASLGRLDEGLYWMKKAVRVNPL--CIGCYRSIASYYW 697 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 25/233 (10%), Positives = 61/233 (26%), Gaps = 21/233 (9%) Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNIL 231 PD+ + +N + + + Sbjct: 567 ALALDPDFALARSGLAVGYLNRFI------YGGKVSWREAACREAGRAVALESGLAEA-H 619 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTP--ESIYRAMTIFDRLQNKS 288 + + L Q Q + + D +Y+++ S+ R ++ Sbjct: 620 NAMAACYSQMELRLQPQAMAEYRRAIDLNPNFFSAMYNYSAILASLGRLDEGLYWMKKAV 679 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT 348 + L CY +A + L K ++ +D + ++ G Sbjct: 680 RVNPLCIGCYRSIASYYWLLGEAAKGDV---------WIDKGLALIPDGARLHVSRGRAY 730 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 G+ + + Q + A + + E +R ++ L+L Sbjct: 731 LPRGRYDEARQIALQVLKEEPNNAEALSLAGTAERLSGRWERSRRYYERMLKL 783 >UniRef50_A4CH85 Serine/threonine kinase n=3 Tax=Bacteroidetes RepID=A4CH85_9FLAO Length = 706 Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats. Identities = 46/384 (11%), Positives = 115/384 (29%), Gaps = 52/384 (13%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT- 161 F ++ + SIA+ PF + L++ +KI+ L + Sbjct: 170 YFLSRPPTSIEVEKSIAVLPFKNESSDTTNTYFVNGLMESTLNNLQKIEDLRVVSRPSVE 229 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDEL 219 + + + + +YF+ G + L I+LI+A I + + ++ Sbjct: 230 KYRHSDKTIQEMAGELEVNYFIAGSGQREGDRVLLNIQLIEAATDRQIWAEQYSRELGDI 289 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAM 278 + I + + ++ + D L + + E + RA+ Sbjct: 290 FALQHEVAQKIAAAIEAIVTPAEREQIEKVPTENLAAYDYYLQALEPYHAGNGEGLLRAI 349 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +F++ + Y +A + L + + + L D + Sbjct: 350 GLFEQ---AIGEDPQFAQAYANMAIAYFLLDMD--LAEKKYTDRINNLADKALLYDSKLA 404 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH-------------- 384 + L L Q +++ E+A ++ + +Y + + Sbjct: 405 ESLVAKALYYMQVKQYRLALPHLEKALEYNPNSVLVYQLLSDYYARIVPDTGKYLEYALK 464 Query: 385 ---------------------------NEKIEEARICIDKSLQLEPRRRKAVVIKECVDM 417 ++A ID+S+ P+ A ++ + Sbjct: 465 GNQLEFGAGDSITRSYSNLHLGNAFIQTGFPDQAMEYIDQSIAYFPQNEYASFVRVFIQF 524 Query: 418 YVPNPLKNNIKLYYKETESESHRV 441 + L + +E + ++ R+ Sbjct: 525 AIDRDLGRMQRSLVREWQKDTTRL 548 >UniRef50_Q1IQW3 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IQW3_ACIBL Length = 737 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 49/370 (13%), Positives = 122/370 (32%), Gaps = 25/370 (6%) Query: 76 YSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPL 135 LR + G + + + + + SIA+ PF + + Sbjct: 252 ADLRRLQRDGGTASVAAAMPAQRA-----------RKTSKAIDSIAVLPFKNATGDAELE 300 Query: 136 ILNQELVQII--SNKKIDGLYTYPMA-ATNFCNDHISQNSFLSRFKPDYFVTGRINQNNA 192 + + + + + + + P + A F ++ S + +TGR+++ Sbjct: 301 YIGEAIAEGVLDGLSHLPKVRIVPRSKAFRFRDEAEDPQSVGKKLDVRAVLTGRVSKRGD 360 Query: 193 VNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERS-----VRLAK 245 + EL+D + V++ + + I + + + P + + K Sbjct: 361 QLNIRAELVDVAKDAQLWGAQFSRTVNDAPDLHEEIAKRVAEKLEGPSSAGSKGGKKSEK 420 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 + N L G L +T + + + + + D++ E Y +A + Sbjct: 421 VETTSVNKEAQALYLRGSHHLNKWTADGVQLGIELCKQ---AIDLEPTYAEPYAAMAMSY 477 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + G + EL+ ++A L + + A + ++ + + + E+A Sbjct: 478 AVSGVLGSLDAELSQRQAKALGQKALQLNEALPEAHAALAIVCYFTFELSAAVRFGERAI 537 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKN 425 + D+ Y A+ +IEEA + ++ +P + +Y + Sbjct: 538 ELAPDLPIARYALAMGLSTKGRIEEATSILREAADTDPLMLPVNYAY-GLMLYYSHRWDE 596 Query: 426 NIKLYYKETE 435 + E Sbjct: 597 AAAQLRRALE 606 >UniRef50_A4APJ2 Probable serine/threonine kinase n=2 Tax=unclassified Flavobacteriales (miscellaneous) RepID=A4APJ2_9FLAO Length = 686 Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats. Identities = 44/305 (14%), Positives = 99/305 (32%), Gaps = 12/305 (3%) Query: 105 VFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT- 161 ++ ++ SIA+ PF N L L++ +KI+ L + Sbjct: 150 FNNKEVPQEKKIVKSIAVLPFKNESNDSTNLYFVNGLMESALNNLQKIEELRVISRTSVE 209 Query: 162 NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--EL 219 F ++S +Y V G + L I+LI+A I + ++ Sbjct: 210 KFRQTNLSAPEIAKELNVNYLVEGSGQRVGNQVLLNIQLIEASTDTPIWVEQYNQEIVDI 269 Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAM 278 + I ++ L + ++ ++ D L + + T E + A+ Sbjct: 270 FALQNDVAKKIAVSIEAVVTPAELERIEKKPTDNLEAYDYYLKALEPYHSRTKEGLEEAV 329 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +F++ T Y +A + L + K + D + Sbjct: 330 LLFEK---AIKEDTQFARAYANIAISYYFLDIDKKHKQYTELIN--NYADKALLYDSKSD 384 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN-EKIEEARICIDK 397 L L + + +++ E+A ++ + + A ++ ++ K Sbjct: 385 LSLIAKALYYAQTDEYRLALPHLEKALEYNPNSTPVVQMLADLYARAIPNTDKYLEYALK 444 Query: 398 SLQLE 402 +QL+ Sbjct: 445 GVQLD 449 >UniRef50_UPI0001905C45 two-component response regulator protein n=2 Tax=Rhizobium etli RepID=UPI0001905C45 Length = 385 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 40/337 (11%), Positives = 102/337 (30%), Gaps = 11/337 (3%) Query: 124 PFTTSLNTLDPLILNQELVQI--ISNKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPD 180 PF + L + I+ + L A+ N + + Sbjct: 3 PFENLGGDTEKQYLADGIADDLIIALTRFRWLRVASRGASFARWNGSRDPRTVGVELGVN 62 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPE 238 + V G I + + L DA + S H + E+ I + I + Sbjct: 63 FLVDGAIRYTGDRIRISVHLADAARGATVWSEHYDLQLAEIFAVQDAIAERIAAAIEPEL 122 Query: 239 RSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 N D + G + + + A F + +++ + E Sbjct: 123 LLRHGLAVAPHTGNITAWDLVRQGTFNFHKVSQPTHLLARRFF---REAAELDPMLPEAQ 179 Query: 299 CLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 A + L +G ++ A Q+ L + + + +++ +G+A + Sbjct: 180 IWRARVNAGLIAYGWTDDPAADGQEGLTAALRAIYLDARNPYSHYALAIVSAYTGRADQA 239 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK--ECV 415 + E++ + A + + + AR + + L+L P + V + Sbjct: 240 ILAAERSIELGSSFALGHLVLGMARLFSGDAAGARKLLSRGLELNPHDPQNGVWFSLLML 299 Query: 416 DMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 + + ++ + + + ++ + + + Sbjct: 300 ARFFSDDVEGALAVGHTALKARPDWPALMRLQACYHM 336 >UniRef50_B0UEE6 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UEE6_METS4 Length = 597 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 50/347 (14%), Positives = 117/347 (33%), Gaps = 18/347 (5%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRF 177 A+ PF T + L + + + + GL ++T + + + Sbjct: 206 AVLPFRTEGREAGSDYIGMGLANDLIVALQSVRGLLVISRSSTLPYQGRGVDRRRVSREL 265 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVH 235 Y ++G + N A + L D + +I ++ ++ I IL ++ Sbjct: 266 GVRYVLSGSVAVNGARLRINASLADQETGVVIWADRYDGSTADIFALQSRIATRILWSIA 325 Query: 236 KPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 R L + + N + +L +Y +A + + Sbjct: 326 PHVREAELKRALRKRSENRNAYELVLQAVDAMYLMRSPEFPKARELLQDAMRADE---TY 382 Query: 295 TECYCLLAECH-MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SG 352 + A H ++A +++ A++A L + DG LA+ G L Sbjct: 383 ATSFAYAALWHIHNVAQGWAADVGSEAEEATRLAVAAIERDPADGFALAVYGHTKALFFR 442 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI- 411 + + ++FE+A S A + + V+ + + E A ++ L++ P ++ Sbjct: 443 EYANAMLIFERALEASPGNAMAWTLSSGVYGYVGQGEAAVTRAEQGLRISPVDVQSYFYL 502 Query: 412 -KECVDMYVPNPLKNNIKLYYKETESESH-----RVIIDNILKLKQL 452 Y+ + + K R++ ++ L+++ Sbjct: 503 MFLGQAHYLSRNYEEALIWAQKTFLLNPRLCANLRILAATLVALERI 549 >UniRef50_UPI0001903BD8 transcriptional regulator domain-containing protein n=1 Tax=Rhizobium etli Kim 5 RepID=UPI0001903BD8 Length = 272 Score = 177 bits (450), Expect = 5e-43, Method: Composition-based stats. Identities = 46/266 (17%), Positives = 91/266 (34%), Gaps = 12/266 (4%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + F L G L + + V + +L +LLE+ G VV K ++E W + Sbjct: 2 GSSTLSFAPFLYDPRTGSLWREGKPVATGPRPAALLGLLLEAEGRVVTKADLMERAWPGL 61 Query: 65 IVSDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 V + +LT I +LR + + I T+ R GYR + + ++A+ Sbjct: 62 AVEEGNLTVQIAALRRLLGVRADGTDWIVTVPRVGYRL-----PRQDEAASAQPPTVAVL 116 Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA-TNFCNDHISQNSFLSRFKPD 180 PF D +V I + + + + I ++ Sbjct: 117 PFVNLGGDADQDYFADGVVTDIITALARFRSFSVVSRNSAFVYKGRSIDIREVAAQLGVR 176 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPE 238 Y + G I + + + ++L+D + ++H + + I + + TV Sbjct: 177 YVLEGSIRREGSQVRINVQLVDGVTAANLWADHFEDGIGGMFAFQDHITERVASTVEPTI 236 Query: 239 RSVRLAKQDQGYKNHYL-SDEMLAGK 263 + + + N D L Sbjct: 237 EVAEIQRSRRDRPNSLSVYDLYLRAL 262 >UniRef50_Q0BZ36 TPR domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0BZ36_HYPNA Length = 522 Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats. Identities = 65/437 (14%), Positives = 133/437 (30%), Gaps = 27/437 (6%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 +DL + ++ + + + + VLI L + VV +D +I Sbjct: 13 IDLASMPRCRIGALTLAPPLREVSGPDWTEVLEPRVMQVLIALASPSAEVVTRDELIARC 72 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 W + VS++++ RCI LR + G I T+ R GYR + Sbjct: 73 WNGLAVSEDAIQRCIGRLRRLARDRGSFE-IVTVPRVGYRLLPDAAPMPRETSDRLKGHT 131 Query: 121 AIF---------PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQN 171 PF+ L I + + Sbjct: 132 RSPAPQLLVDVEPFSNLTPDETVSRFATLLFDDI---------VIALT----LHRDFVVR 178 Query: 172 SFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNIL 231 Y +TG + + + + +++ + +I + D + + D +L Sbjct: 179 LAGPAQTDAYRLTGNLRPDGNHIQVSLRIVN-SDGAVILARRFEAD-WNGEAPPSDDFVL 236 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 Q + A+ D+ + A + + ++ S+ + +I Sbjct: 237 QVSGALSSEILRAETDRALRKSADLTAWEAVVRSVSAYSSISVGNLDFAISEARRGLEID 296 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 E + LA G + A++A +D + +LA + Sbjct: 297 PAYAEAHAALANALAGKFEVGGGLDQALAEQAAREIDLALTLGRDRPDVLARAATALSMI 356 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR--KAV 409 G+ + E A + + Y V N + E+A + + QL P Sbjct: 357 GRPAEALPYAEDAVAMNPGGGIGHLYLGRVLMRNGEPEKAIFHLSRFEQLSPSSPLRYFS 416 Query: 410 VIKECVDMYVPNPLKNN 426 ++ V +++ LK Sbjct: 417 TFQKSVALFMQGDLKGA 433 >UniRef50_D2LHL5 Putative adenylate/guanylate cyclase n=1 Tax=Rhodomicrobium vannielii ATCC 17100 RepID=D2LHL5_RHOVA Length = 598 Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats. Identities = 41/321 (12%), Positives = 91/321 (28%), Gaps = 8/321 (2%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT 161 + + + +A+ PF N + + ++ L ++ Sbjct: 191 CEAAMQPPQGHDRKPVLAVLPFQIHRNGPVDEFCGEVFADSLVNGLSRLRWLPVLSQWSS 250 Query: 162 -NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELH 220 F N S Y VTGR+ + + + + LID+ N + +D Sbjct: 251 LRFQNGQRSPCEIGRALGARYLVTGRLKLSGSQLDVTVNLIDSSNCHNLWGRTFALDPTS 310 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMT 279 A+ K + G L T + + A Sbjct: 311 LAEAQNDFTTAAVSALELERAEFARLSVKKKEDLNPWELVRRGTWHLKKLTEDHLAIAAE 370 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 F Q + +E LA CH S + ++ EL + D + Sbjct: 371 FF---QTAVEGDPGSSEALIQLATCHFSDIWMHSRDAA-LLRETEELARKACLLDPQDAR 426 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + ++GL+ + + + F+++ + + + + + A +++ Sbjct: 427 VYLVIGLVKLATEMPERARSYFQRSLELNPSFPAAHCCLGSSYTLAGEPGIAIAHFQRAM 486 Query: 400 QLEPRRRKAVVIKECVDMYVP 420 +L P + Sbjct: 487 RLSPCDPLTFHFLGETALAYH 507 Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 15/135 (11%) Query: 266 LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE 325 L E RA + F R ++ +C L + G A+ Sbjct: 433 LVKLATEMPERARSYFQR---SLELNPSFPAAHCCLGSSYTLAGEPGI---------AIA 480 Query: 326 LLDYVSDITTVDGKILAIMG---LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH 382 ++ D +G L L G+ + E+A + Sbjct: 481 HFQRAMRLSPCDPLTFHFLGETALAYHLIGEWAAAADHAERALNLRARYRLAKVVQIATF 540 Query: 383 FHNEKIEEARICIDK 397 + ++ +AR I+K Sbjct: 541 ARSGEVAKARAEIEK 555 >UniRef50_Q024X1 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024X1_SOLUE Length = 763 Score = 177 bits (448), Expect = 9e-43, Method: Composition-based stats. Identities = 40/341 (11%), Positives = 88/341 (25%), Gaps = 19/341 (5%) Query: 115 TSDYSIAIFPFTTSLNTLDP-LILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQ 170 SIA+ PF + + + + K+ L + + Sbjct: 314 HRISSIAVRPFDNFSGAGAAGDWFSDGMTETLIAEMSKVRSLKVISRTSVMQYKKSKKPL 373 Query: 171 NSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIID 228 D + G + + +LIDA + + D ++ + + Sbjct: 374 KQIAQELGADAVIEGSALRVGDRVRITAQLIDASTDQHLWAKDYDGDLKDVFALHRDVAR 433 Query: 229 NILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 I Q + + + G+ + + G A ++ Sbjct: 434 AIAQEIGVTLTAGERTRLAPGHSAKPEALEAYFRGNYHYSRG------EARAAVTLARDA 487 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + + + LL M A + L ++ G LA +G Sbjct: 488 VRVDPNLAQGHELLGLSLMDTANFNMVHYSEVLPEIRAELHRALELEPNRGAALACLGWG 547 Query: 348 TGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 + + L Q A V +++EA + +++ +P Sbjct: 548 LMMGDHDWVGAERLTRQGFDLDPSS----TSYAFVLAGRGRLDEAVRVVRQAVLHDPANP 603 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNIL 447 A + I+ + K E + + L Sbjct: 604 SA-HADMGYINQMARHYPEAIQSFRKALEMNPNYGYVHTHL 643 >UniRef50_Q1MH13 Putative uncharacterized protein n=10 Tax=Rhizobiaceae RepID=Q1MH13_RHIL3 Length = 612 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 34/345 (9%), Positives = 102/345 (29%), Gaps = 13/345 (3%) Query: 100 RFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYP 157 RFS + + ++ I PF + + L + + + + + + Sbjct: 180 RFSSIWPFATADITESDGPTLVIAPFANLGDGPQAELYTTGLTEELLTALPRFKEIKVFG 239 Query: 158 MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD 217 + + + + + G + + + + L+D + ++ S D Sbjct: 240 RETSRSLPPEVETSRIRGELGARFLLAGGVRVSGSRVRVTARLLDTQTDEILWSQTYDDD 299 Query: 218 ----ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPE- 272 +L + + + V +P + A + S Y + E Sbjct: 300 IGVRDLFTIQSDVANKVATAVAQPYGIMAQADVSNPPPDDLGS---YGCTLSFYAYRAEL 356 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE---LAAQKALELLDY 329 SI R + + L++ + +L+ ++ + ++ + Sbjct: 357 SIERHGEVRNCLESAVARYPSFATAWAMLSIIYLDEDRFRFNRKPISSTPIDRSFQAARR 416 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 + + + L + S + + + E+A + + L + + + Sbjct: 417 AVQLDPGNTRALQALMTTLFFSQRVSEALQIGERALATNPNDTELLAEFGTRLAMSGEWQ 476 Query: 390 EARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKET 434 +D+++ L P + Y+ + K + + Sbjct: 477 RGAALLDRAIALNPAGGGYYRGTRALAAYMLHDDKTAVIEIRQAD 521 >UniRef50_A6D228 Putative transmembrane adenylate cyclase n=1 Tax=Vibrio shilonii AK1 RepID=A6D228_9VIBR Length = 551 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 42/417 (10%), Positives = 113/417 (27%), Gaps = 40/417 (9%) Query: 49 HVVLKDMIIESVWKNIIVSDESLTRCIYSLRCIFE-----KIGYDRCIETIYRKGYRFSG 103 V +D + +D + +R E + D + +I + Y Sbjct: 78 EVFDRDADFDH------QADPIVRIQAGRVRRTLETYYLTEGVNDPIVLSIPKGRYSPLF 131 Query: 104 QVFKTKINEDNTSDYSIAIF------------PFTTSLNTLDPLILNQELVQIIS--NKK 149 + S A PF + + + + + ++ + Sbjct: 132 TPQVPQAARQTASLAQFARETQKSLSPTLTVLPFLSLSDDPEKRFFAEGFGEELATELAR 191 Query: 150 IDGLYTYPM----AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKN 205 D L M + + + +G + +Y +L + Sbjct: 192 FDMLKVVSMHALGETSIDPRTSADVKGLGEKLGVSFITSGTMQALGNKVRIYAKLYRTDS 251 Query: 206 LFLIASN----HLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL----SD 257 + + L D+L + II ++ + + + + Sbjct: 252 GEQVWAEKYTCDLATDDLFSVQDDIIAEVVAELASSFGIIHREIYQSCNQKKIEHLSTYE 311 Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 L + L + ++ +A + + + +LA + + G ++++ Sbjct: 312 ATLRYRHYLMTLSEDTHQQATQAL---LSAVQNEPDVALLHAMLAVLYFDADMLGMNKVD 368 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 A + AL ++ + + M + ++G ++ + + A Sbjct: 369 SAVETALNYAKRAVELEPTNQESQIAMLMAHQVAGDVNSVIETVDKVIAINPNAAYQIGL 428 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKET 434 + + I S L P R + + + + + K K + Sbjct: 429 SGWALCMAGEFDRGLQLIQDSKALNPFRPPWFSVASIIHKIMLDDFEGADKAISKLS 485 >UniRef50_A9DT30 Adenylate cyclase cya3 n=1 Tax=Oceanibulbus indolifex HEL-45 RepID=A9DT30_9RHOB Length = 617 Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats. Identities = 56/383 (14%), Positives = 111/383 (28%), Gaps = 15/383 (3%) Query: 78 LRCIFEK---IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDP 134 LR + IG ETI+ + ++ N S+A+ PF + Sbjct: 185 LREAAKDARSIGRVVMAETIHPAEV-IQTNDNEGLNSKFNNRRSSLAVMPFFAVQSDQPY 243 Query: 135 LILNQELVQII--SNKKIDGLYTYPMAATNFC-NDHISQNSFLSRFKPDYFVTGRINQNN 191 + + L + K+ + A+ N + R DY TG + Q + Sbjct: 244 IEIADGLTHDVIVRLAKLRCISIIARASVQALENHGLDPAEAGIRLGVDYVATGTLRQQS 303 Query: 192 AVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 + +EL++ ++ ++ V L + + I + + Sbjct: 304 STLRFELELVETSCGSIVWTDVCEVTSANLMEALNDLGNWIASALMGEIEQSERNRAILR 363 Query: 250 YKNHYLSDEML-AGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSL 308 + + G +Y FT +A F+R + + + + L+ H Sbjct: 364 PPSSLDAWGSHHRGLWHMYRFTKHDNAQAQLYFERAKT---LDPTFSRAFAGLSFTHWQS 420 Query: 309 ALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHS 368 A S+ + A A D MG L + + ++ S Sbjct: 421 AFQNWSDPVVEANLAYAAAAQSLLADEKDPAAHWAMGRALWLRKKNDAAVFSLRESVDLS 480 Query: 369 TDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV--VIKECVDMYVPNPLKNN 426 + A +Y A V A D S L P + + + + Sbjct: 481 PNFALGHYSLAFVESQTGDPHAAIQSSDLSRSLSPYDPLMFGILGSRAIAHFRLQEFEEA 540 Query: 427 IKLYYKETESESHRVIIDNILKL 449 + + V I + + Sbjct: 541 AMWAKRAAARPNAHVNIYGLAAI 563 >UniRef50_A0NQZ6 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NQZ6_9RHOB Length = 575 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 41/343 (11%), Positives = 104/343 (30%), Gaps = 16/343 (4%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA 160 + +D S+ + PF S + IL + + + I + + + + Sbjct: 160 MHFLPAQEEQDEVLKPSVMVLPFRVSSTDPEQQILAEGIAEQIMTALSRFPDFRIFWPPS 219 Query: 161 TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV---- 216 + + + +TG + V + +L+ + + ++ S+ Sbjct: 220 GANGASTMDPVEIGRQEDVSFLITGAVGSEGGVIRVSAKLVHSPSRRVLWSSSYDRVRSR 279 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY----KNHYLSDEMLAGKKELYDFTPE 272 L + I +I +P ++ ++ + +L G +F+ + Sbjct: 280 STLLEIEESIASDIATVAGQPYGVIKSELASTLPAGNEPSNDSFECVLRGYVYRRNFSKQ 339 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL---ELAAQKALELLDY 329 + +R E + +L ++ A G + ELA +AL+ + Sbjct: 340 LHATVQSCLER---AVKRDPGYVEAWAMLGWIYLDAARFGLTADGSKELAFDRALDAASH 396 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 + + L + I G + L ++A + + K + Sbjct: 397 ALSLDGNNILALKALSSINHYMGNIEEGERLAKKALALNPNDPDTMAQLGWRLAVAGKFD 456 Query: 390 EARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 E ++K+++ VD + + K Sbjct: 457 EGISYLEKAIERTRNAPGWYYHLIAVDHLLKGQYAEMLTAAKK 499 >UniRef50_Q13CI3 TPR repeat n=5 Tax=Rhodopseudomonas palustris RepID=Q13CI3_RHOPS Length = 584 Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats. Identities = 45/359 (12%), Positives = 114/359 (31%), Gaps = 16/359 (4%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA 159 + ++ + + +IA+ PFT +++ + + + +I L + Sbjct: 161 RHILDTSQPPVGFSGNQAIAVLPFTNVTGDEALDYISEGISEELIVGLSRIRWLPVIARS 220 Query: 160 ATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDEL 219 ++ D I + R Y + G + + + L +A + I S + Sbjct: 221 SSFSFADTIDRKVIGQRLGAHYLIEGHLYRAYDSFGVSASLSEAMTGYAIWSRRFTLQSP 280 Query: 220 H---NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 QF+ + + Q K E + ++ +++ +SD + G+ L T Sbjct: 281 AMRGELEQFVNELVAQLETKIEHAEQIRIRNKRQDTLGVSDLIWRGRWHLNRLTRADSEM 340 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 A +F + + E G+ E + +L S Sbjct: 341 AQKLFA---DALALDPKSPEALIQTTSALAWSIWAGRQPQEQVL-RMRKLAQQASLADPD 396 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 DG+ + G+ + + L + A + +A + + + +A + Sbjct: 397 DGRGFMLAGIAEMWLRHPQEAKNLLQHAIALNPSLALAHAQLGGCYNLAGEPAKAIDHLR 456 Query: 397 KSLQLEPRRRKAVVI--KECVDMYVPNPLKNN-----IKLYYKETESESHRVIIDNILK 448 S++L + + + + L + +H + I+ +++ Sbjct: 457 ASMRLSLNDPNIFYALGEMALAYTMLGRWAEAAEHASLSLARRPAYWYAHVLKINALVR 515 >UniRef50_Q1YFU6 Putative adenylate cyclase n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YFU6_MOBAS Length = 594 Score = 174 bits (441), Expect = 6e-42, Method: Composition-based stats. Identities = 45/332 (13%), Positives = 112/332 (33%), Gaps = 13/332 (3%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHI 168 D + S+A+ PF +V+ + S ++ +A + + Sbjct: 184 PDPHTQPSVAVMPFDNLSGDPGRNNFIDGMVEEVTASLARVREFLVIARQSAATYRGKSL 243 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFI 226 + Y + G + ++ + + L+D + I S + D+L +I Sbjct: 244 GAKEIAAELGVRYILQGSVRFSDRRMRVSLHLVDGETALQIWSERIDAEIDDLFQVQDYI 303 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQ 285 + + +H R + + + ++ D ++ L+ + A+ + D Sbjct: 304 AETVSGALHPTIRRAEIERARRRPPDNLVAYDLVMQALPHLWAHRHDENDLAIGLID--- 360 Query: 286 NKSDIQTLKTECYCLLAECHMS-LALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 ++ + A H +A + +++ + LLD D L + Sbjct: 361 EALALEPDNGRAAAIGAWAHAQHIAYNWANDIGEQRTRGRALLDRTPGRIDDDPLALTAV 420 Query: 345 GLITGL-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 T L + ++ L ++A + A + R + + ++A C ++SL+L P Sbjct: 421 ATATMLIEADLERANALLDRALDLDVNHAWAWTRRGFARVYAGQPDDAFACFERSLRLSP 480 Query: 404 RRRKA--VVIKECVDMYVPNPLKNNIKLYYKE 433 A I + + + + + + Sbjct: 481 LDPFAFNSFIGIGLAHFASDRPEEAARWTRRA 512 Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 32/150 (21%), Gaps = 17/150 (11%) Query: 233 TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR--------AMTIFDRL 284 + + L + D N L + + +T R A F+R Sbjct: 416 ALTAVATATMLIEADLERANALLDRALDLDVNHAWAWTRRGFARVYAGQPDDAFACFERS 475 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 S + + + H ++A + Sbjct: 476 LRLSPLDPFAFNSFIGIGLAHF---------ASDRPEEAARWTRRALAEKPGMTWPHRDL 526 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASL 374 G GQ + + ++ Sbjct: 527 AAFLGACGQEADARLALDRFTASRPGTTIA 556 >UniRef50_Q029D0 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q029D0_SOLUE Length = 877 Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats. Identities = 49/383 (12%), Positives = 109/383 (28%), Gaps = 20/383 (5%) Query: 80 CIFEKIGYDRCIETI----YRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPL 135 + + +R + T+ K+ + SIA+ PF D Sbjct: 391 RSLKFLKRNRALITVGMISAVLVLAVDLGSRKSSRYNLAPDNASIAVLPFADISPGKDQK 450 Query: 136 ILNQELVQIIS--NKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNA 192 ++L + I GL +++ F + + + I Sbjct: 451 YFAEDLTDGLLGMLASIPGLRLSGRESSSKFQGSTQNVAAICKALNVSAVLDASIGNEGG 510 Query: 193 VNTLYIELIDAKNLFLIAS--NHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 + L A + + + + +E+ + + I ++ + + Sbjct: 511 HAKINAHL-RAADGRQLWAGTYNREANEIFAVQEEMTQAIAVALN--LKPPKRTASPSMT 567 Query: 251 KNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLAL 310 L G+ Y ++ +A++ F++ + LA+ H +A Sbjct: 568 TTPAAYRLFLQGE---YFRDQGNVPQAISYFEQT---LGKDRGYAPAWVALADAHAQMAG 621 Query: 311 HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SGQAKVSHILFEQAKIHST 369 G KA E L+ + + A+ G I L + ++A + Sbjct: 622 GGTIPAAEGYGKAREELESALALNPHLAEAHALKGYIKMLHERDWPGADASVQRALALAP 681 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKL 429 A + +++EA + ++++L P + +Y Sbjct: 682 GSDGAIRIAAFLARILGRLDEAIVLCRRAVELNPIYYN-SYKNLGITLYYAGRPTEATGT 740 Query: 430 YYKETESESHRVIIDNILKLKQL 452 K E L L L Sbjct: 741 LQKALELNPKTRYAHAYLCLANL 763 >UniRef50_Q0ASW0 Integral membrane protein-like protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASW0_MARMM Length = 605 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 50/357 (14%), Positives = 101/357 (28%), Gaps = 23/357 (6%) Query: 112 EDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHI 168 +D SD SIA+ PF D + + + I +I+GL + + +D + Sbjct: 129 DDIPSDNSIAVLPFLDLSPAGDQQYFSDGISEEILNVLVRIEGLDVTSRTSAFQYRSDTM 188 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP----VDELHNTSQ 224 R + + + G + ++ + +LIDA+ + S + L Sbjct: 189 GVPEIAERLRVRHVLEGSVRRSGNTIRITAQLIDARTDVHLWSQTYDQSLTAENLFAIQD 248 Query: 225 FIIDNILQTVHKPERSVRLA-KQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 I + I++ + + N D L + + T + A + + Sbjct: 249 EIANAIVRALSEVLDIQAPEIAVAPLTDNVDAYDLYLQARDLFHRRT--DLDVAADLLAQ 306 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE--LLDYVSDITTVDGKIL 341 T + L A HG S Q AL + + + Sbjct: 307 ---AVGQSPDFTAAWALRAAISNVRESHGYSPEAGVDQAALTESYARQTLALDPDNALAI 363 Query: 342 AIMGLITGLS-------GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 A+ G +A + A++ + + ++ A Sbjct: 364 AVRASHQSQRMIFQREPGDIGSVLTDLNRAAALNPHDATIQNWLGMGRLFIGDLDGALSS 423 Query: 395 IDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ 451 +Q+E R A + V + + N L + Sbjct: 424 FQTCVQIE-ARYGACAENYYDTLAVMGRTDEALAAMEANLANGLSNPNWINFAVLAE 479 >UniRef50_C3KKQ7 Putative adenylate cyclase n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKQ7_RHISN Length = 578 Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats. Identities = 47/330 (14%), Positives = 103/330 (31%), Gaps = 22/330 (6%) Query: 131 TLDPLILNQELVQIISNK--KIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRIN 188 D L + + ++ + ++ L+ +A++ Y V G + Sbjct: 202 DQDQTFLAEGMTDDLTLELSRLKSLFVTSRSASSVL-RTADPVEIGKVLGVRYVVAGSVR 260 Query: 189 QNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQ 246 + A + I LI+ L+ S+ P E+ + I + TV LA Sbjct: 261 KAGAQVRVNISLIETAEGHLLWSDRIQRPFAEILDIMDEITARVAATVSGRIEQSELAAA 320 Query: 247 DQGYKNHY-LSDEMLAGKKE--LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL-- 301 + + L G L ++ AM F++ + + Sbjct: 321 RLKRPENMSAYEHYLRGLDHHRLAGVADVHLHEAMGWFEKAMQA---DPGFGRPFAMHVC 377 Query: 302 AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILF 361 + + EL+ A + ++ D + IMG I G S Sbjct: 378 SWSSLPSFDLEAGELQTA---------HALELDPTDPEAHRIMGAIKMKRGDFVASRFHH 428 Query: 362 EQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPN 421 E+A + + A A + + A +D++ L+P + + +YV + Sbjct: 429 ERAIELAPNDAYTIGRCAAFYLFAGEPLRALELLDRAETLDPFLPVWITEERVASLYVLD 488 Query: 422 PLKNNIKLYYKETESESHRVIIDNILKLKQ 451 + ++ +K + ++ + Sbjct: 489 RYEEMFEVAHKLPFQTRRTYLYRVAARMAR 518 >UniRef50_B4R917 Adenylate cyclase n=1 Tax=Phenylobacterium zucineum HLK1 RepID=B4R917_PHEZH Length = 755 Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats. Identities = 41/316 (12%), Positives = 94/316 (29%), Gaps = 13/316 (4%) Query: 147 NKKIDGLYTYP-MAATNFCNDHISQNSFLSRFKPDYFVTGRINQ--NNAVNTLYIELIDA 203 + + + + + F + + + N + + LI+ Sbjct: 196 LARFPNFEVLAARTSLSLTPEQLVPARLHEDFGVTHLLDSSLRAGTPNQALKVKVNLIET 255 Query: 204 KNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEML 260 L S V LH + + + + RL++ + D L Sbjct: 256 ATGRLAWSGDYDVSLASLHAVENEVAAAVANQLSTRIDTARLSEARHRPTSSLEAYDLWL 315 Query: 261 AGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLAL-HGKSELELA 319 G++ L T E+ A +F R ++ Y L+ H + + E A Sbjct: 316 RGREVLRRGTSEADAEARALFQR---ALELDPTYARAYAGLSLSHFNDWSCQSWNCWEEA 372 Query: 320 AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRA 379 + A + +++ D + A++ I E+ S + A Sbjct: 373 ERLAFDYACRAAELDDSDHLVQAVLARIHIYRRNWGQGRRHLERVLALSPNNADALMQTC 432 Query: 380 LVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETES--- 436 + + + + A +K+ +L P I + ++ L++ I L Sbjct: 433 VWWSYLGEDDRALSMAEKAFRLNPLHEPWYYIYAFLACFMAQRLEDGIALAEASPPHMMV 492 Query: 437 ESHRVIIDNILKLKQL 452 + + L ++ Sbjct: 493 DQSAYMAATYAHLGRM 508 >UniRef50_B8IB76 Adenylate/guanylate cyclase n=2 Tax=Methylobacterium RepID=B8IB76_METNO Length = 667 Score = 171 bits (432), Expect = 6e-41, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 108/346 (31%), Gaps = 13/346 (3%) Query: 93 TIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKI 150 T + S + ++ + + SI + PF + + L + + I+ +I Sbjct: 244 TAVQAAATVSANPVRPQLQDSLAARLSIVVLPFASRDGGPEYERLAESIAAEITSDLSRI 303 Query: 151 DGLYTYPMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLI 209 +G + + + + + Y + G + + LID I Sbjct: 304 EGSFVIASSTALAYKDKLADVRDLGRELRVRYLLNGSLRHTGTRVRINARLIDTVTGAEI 363 Query: 210 ASNHLPVDE--LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLS-DEMLAGKKEL 266 + D + + ++ I + ++ + + N+ + D G L Sbjct: 364 WAERFKSDASAISDIEDDVVAQITRALNIELTEAEVRQFQHERPNNPDAADLAAHGWSVL 423 Query: 267 YD-FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKAL 324 + ES+ RA T+F++ LA + G S + +A Sbjct: 424 NRPLSRESLLRARTLFEQ---ALKRDGESVRARVGLARSLALMVNFGWSTSVTSDLARAD 480 Query: 325 ELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH 384 L+D V + I G I Q + + + A ++ +A Y A Sbjct: 481 YLVDTVLASRPDEAMAYCIKGEILRGQKQYEAAVAAHQTAIAYNASLAPAYGSMANAKLQ 540 Query: 385 NEKIEEARICIDKSLQLEPRRRKAVVI--KECVDMYVPNPLKNNIK 428 + +EA +++++L P + C I Sbjct: 541 LGQADEAFALAERAVRLSPHDPLLSLWSATLCEAAERRQRHDEAIT 586 >UniRef50_Q12IZ6 Transcriptional regulatory protein-like protein n=2 Tax=Shewanella RepID=Q12IZ6_SHEDO Length = 580 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 73/447 (16%), Positives = 142/447 (31%), Gaps = 45/447 (10%) Query: 8 SYHFLEGLTLTEDGILTQGNE-QVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + T G L + ++ +V +P +L VL E+A +V ++ ++E VW +++V Sbjct: 17 RYQFNDLTLNTRLGTLVRDDKLEVRLPWLSYRLLSVLCEAAPGIVSQEQLLEKVWPDVVV 76 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 DE+L + I LR + IE I +GYR QV + + Sbjct: 77 GDETLKQRIKLLRRALNDDAHTPIYIEAIRGRGYRLLPQVI----VTSEVTPTRMTSLDL 132 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTG 185 + + + L +++ + L F + L P Sbjct: 133 ANDTHVMPEDGKSYPLFWKLTSLSLAALMLIFALVALFI-SSGDNLAKLDENAPS----- 186 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 + LY++ + D LH F + Sbjct: 187 SLASPGFDVELYLK------GLDYYHRYREADNLHAIELFTSALAIN------------- 227 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 + LSD G ++ F +++ D + + Y L + Sbjct: 228 PNLALAYSGLSDAYSQG---VFQFNAPRLWQ-QKAIDAAYKAIALDPNLAQAYKSLGLAY 283 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + KA+ + + +G I GQ S + +A Sbjct: 284 YNKGWLN---------KAINANVKALQKQANYHEAMTNIGFIYREMGQLSKSMMWINKAL 334 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKN 425 S + + ++A E +A++ +D++L L+P A + + Sbjct: 335 TLSPNHSVSCVHKAQSLIALEDFPKAQLWLDRALSLQPDSLLANDAQ-GLWYLHQGRFLQ 393 Query: 426 NIKLYYKETESESHRVIIDNILKLKQL 452 Y+K ++ + + L L QL Sbjct: 394 AKAHYFKLSQDLPRQTHFIHGLALSQL 420 >UniRef50_Q124D4 Integral membrane protein-like n=1 Tax=Polaromonas sp. JS666 RepID=Q124D4_POLSJ Length = 607 Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats. Identities = 65/405 (16%), Positives = 133/405 (32%), Gaps = 20/405 (4%) Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSG------QVFKTKINEDNTS 116 I+VS E + + L E +G ++ + + + + F T +D Sbjct: 151 EIVVSAELRDQLVPVLDADIEDMGE-CYLKHVEKPIHTYRVAPPGKAPTFVTLPTDDTEL 209 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSF 173 +IA+ PFT + D +L + L + I + + L + + S Sbjct: 210 RPTIAVIPFTARTSDPDHAVLGEILAEEIIAALSRTPDLNVISRLSTSALRGRDASLPEV 269 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV---DELHNTSQFIIDNI 230 + Y ++G L ELI+A+ + + L + LH + + + Sbjct: 270 QNHLHASYVLSGAYRVLGQQLILVTELIEARTGRAVWGDSLKSTVQEVLHGEDRITAEVV 329 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 Q + R+ + N S ++ ++ T R + + L + Sbjct: 330 SQLGAQIVRTEMQRAASRPLPNLESSTLLMGAISLMHRSTRSEFDRVREMLEYLIERHRR 389 Query: 291 QTLKTECYCLLAECHMSLALHGKSEL-ELAAQKALELLDYVSDITTVDGKILAIMGLIT- 348 LA+ H+ G S + ++ALE D+ LAI G + Sbjct: 390 LP---TPRAWLAKWHVLQVTRGLSSGGKDETKRALEQTQRALDVDPGCSLALAIEGFVHC 446 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 + + +E A + + + + + ++H ++ +A D++L L P Sbjct: 447 HMLKDLDGAAQRYESALAANPNDSLAWLFSGVLHSFRDEGVKALAASDRALNLSPLDPML 506 Query: 409 VVIK--ECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ 451 + K I+L S +L + Q Sbjct: 507 YFYQSLAASAALSAGDYKRVIELATASLRSNRGHTSTYRVLAVAQ 551 >UniRef50_B2JV68 Tetratricopeptide TPR_4 n=1 Tax=Burkholderia phymatum STM815 RepID=B2JV68_BURP8 Length = 594 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 59/412 (14%), Positives = 130/412 (31%), Gaps = 23/412 (5%) Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIE-TIYRKGYRFSGQVFKTKINEDNTS---- 116 I+VS + + L E +G + YR + I + Sbjct: 139 GEIVVSAQVRDQLTPELDADIEDLGQCHLKHFDQPVRAYRIGPPGPRPVIEPGSAFLPDL 198 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSF 173 +IA+ PF + +L + + I S + L + T F + + Sbjct: 199 RPTIAVIPFASRGGEAQQQVLGEVMADEIISSLSRTAELQVISRLSTTTFRERDATLDEI 258 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELH---NTSQFIIDNI 230 + Y ++G + L +EL +A++ ++ + + H + I + Sbjct: 259 SAFLGARYVLSGAYRSSGDQVVLVVELAEARSRHILWTQSVKGRATHIMLGEDELIDRIV 318 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + + Q + S +++ ++ +RA + + L ++ Sbjct: 319 AEVSGAIIDRELQRARSQALPSLASSTLLMSAIVLMHRGVSHDFHRARDMLEALIERAQR 378 Query: 291 QTLKTECYCLLAECHMSLALHGK-SELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 Q + L + H+ G + AQ AL+ D L I G + Sbjct: 379 Q---ALPHAWLGKWHVLRFNRGWTDDRAGQAQAALDCTRRALDADADCSLALTIDGFVHT 435 Query: 350 -LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 L Q V +E+A + + + + + + + E+A +++L+L P Sbjct: 436 NLLKQLDVGQRRYERALEVNPNDSLAWLLKGTLLAFEGEGEQAVDATERALRLSPLDPLR 495 Query: 409 VVIKE--CVDMYVPNPLKNNIKLYY-----KETESESHRVIIDNILKLKQLT 453 + + ++L T + + R + L L Sbjct: 496 YFYESLGATAALSAGRYERAVELAQRSLRVNRTNTSTLRALAIAQALLGDLE 547 >UniRef50_A4EHZ3 Integral membrane protein-like n=1 Tax=Roseobacter sp. CCS2 RepID=A4EHZ3_9RHOB Length = 675 Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats. Identities = 54/403 (13%), Positives = 129/403 (32%), Gaps = 18/403 (4%) Query: 64 IIVSDESLTRCIYSLRCIFEKIGYDRCIETIYR-----KGYRFSGQVFKTKINEDNTSDY 118 ++VS E+ +C L FE +G + + T + + + Sbjct: 224 VVVSVEARDQCHAELDFDFEDLG-QQILRTTNEDIRAFRVHANTSGARLMPDIAAEDLLP 282 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPM-AATNFCNDHISQNSFLS 175 +IA+ P + + D ++ + + + + + + + T F S + Sbjct: 283 TIAVLPLRARIASADTNVIGEIMADDLIATLSRSADVNVISRLSTTAFRAQEASLDKIGD 342 Query: 176 RFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQT 233 D+ ++G I ++ + ++L + ++ + + V+ ++ N + + + + + Sbjct: 343 MLGADFVLSGTILTHDTHVGMMLQLSEVSTNKVLWAERVAVEVTDILNGIEAVEEIVAKV 402 Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + + + ++ +Y F P A + + + Sbjct: 403 RKAIALNEIDRVRSRPISTLRNYSLLIGAVGLMYRFAPVDFNLAGEML---RTLIERVPN 459 Query: 294 KTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITG-LS 351 +A ++ G S + AAQ+AL DI + L G + L Sbjct: 460 HPAALAWMARWYVLRVQQGWSGNPQEAAQQALGFSRKALDIDPENALALISEGNVLTHLL 519 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK--AV 409 Q + ++ A + + AS R + K EEA+ + +L L P Sbjct: 520 HQLDEAEERYDTALDINPNDASGRVLRGALFAFQGKGEEAKRDCEHALHLAPLDPHRFFF 579 Query: 410 VIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQL 452 + + I L + + Q+ Sbjct: 580 LSLASTASIAAEDYERAIALAKASIRLNRTHTSTLRVKAVAQM 622 Score = 93.6 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 43/229 (18%), Positives = 86/229 (37%), Gaps = 4/229 (1%) Query: 3 LENKFSYHFLEGLTLTE-DGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW 61 + + T D +L + QV + + VL +L+++ G V KD +I +VW Sbjct: 1 MTREVKVRLGLFTYDTGLDCLLDEAGNQVSLRPQSAQVLSLLVDNIGQTVTKDDLISTVW 60 Query: 62 KNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 +++ V+D+SLT+CI +R R ++T + GY+ S T E + Sbjct: 61 QDVSVTDDSLTQCIADVRRALGDTDR-RILKTRPKVGYQLSPTHQDTDQPETALMGGQSS 119 Query: 122 IFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 ++L + P +L ++ K + +D + + + Sbjct: 120 GANAVSALVCIQPAHPKVQLA--LTTIKNEAASLGAGTHIPTKDDTVLFSFPDVMAAVRF 177 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNI 230 + + N + ++LI A A + V L +Q + Sbjct: 178 ALRLSASSNGQNCGIGVDLIPAGQTSKAAYDGARVAGLAGIAQEAQVVV 226 >UniRef50_A3W4X2 Adenylate/guanylate cyclase n=2 Tax=Roseovarius RepID=A3W4X2_9RHOB Length = 592 Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats. Identities = 44/366 (12%), Positives = 111/366 (30%), Gaps = 19/366 (5%) Query: 89 RCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF----PFTTSLNTLDPLILNQELVQI 144 + + I + + + + PF ++++ L + + Sbjct: 157 QYVRNIPTPVEVWHIATGVEAESRSTVTQSADRPSVIVLPFDNLSSSVEDGFLADGIAED 216 Query: 145 I--SNKKIDGLYTYPM-AATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELI 201 + + L+ ++ + + + Y V G + + A + +LI Sbjct: 217 LINELSRFRSLFVIARGSSFAYKDRAQDMRQIAQDMRVRYVVKGSVRRAGARLRVTAQLI 276 Query: 202 DAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-E 258 +A+ I S+ D +L I I+ + + A + Sbjct: 277 EAETGHQIWSDRYDRDMADLFALQDDITRCIVTGLTPEIGAHERAMSRAKPTESLSAWEM 336 Query: 259 MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LE 317 G E+ T I A +F ++ + L+ H G+S Sbjct: 337 CQRGLTEIDMRTTGGIRNATALF---HAAAEADPTYALPHALIGRVHAVRIYSGRSRNPR 393 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 K + + ++ + + L GQ K + +A+ + + A +Y Sbjct: 394 EDVIKGMYHGNRAIELDDRLELGHITLAQLLTLQGQEKDARDALARARALNHNDALVYNA 453 Query: 378 RALVHFHNEKIEEA--RICIDKSLQLEPRRRKA--VVIKECVDMYV-PNPLKNNIKLYYK 432 + ++ + + A ++++L P+ V +++ L N++ Y + Sbjct: 454 QTFINLFQKTPDTAEMEEAGLEAIRLSPQDPMLWSFYWMLAVAIWMRDMTLGENMRKYLE 513 Query: 433 ETESES 438 Sbjct: 514 PAARNP 519 >UniRef50_Q1IU41 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IU41_ACIBL Length = 878 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 56/367 (15%), Positives = 109/367 (29%), Gaps = 17/367 (4%) Query: 91 IETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN--- 147 I I G F V + S+ IA+ PF + Q L+ ++N Sbjct: 326 IIAIVIAGLSFVPPVREKVTQSFTHSEEHIAVLPFDNIGGDASTDAVAQGLMDSMTNALS 385 Query: 148 ---KKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAK 204 L+ P + V G I + + L + LIDAK Sbjct: 386 NLGTVQKSLWVIPASVVRGQKIT-DPMMANRELGATLVVKGSIQRKDQTVHLSVNLIDAK 444 Query: 205 NLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAG 262 NL I S L +L + + + ++ + L G + L Sbjct: 445 NLRQIGSASLEDSSGDLAALQNEAVSRLARLMNIKVSADFLKTTG-GSVAPAAYESYLKA 503 Query: 263 KKELYDFT-PESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ 321 + + P ++ +A+T ++ + Y L E + + Sbjct: 504 LGLMQRYDKPGNLDQAITAL---KSAVETDPRFALGYAQLGEAFRLKYNLDVNP--KWIE 558 Query: 322 KALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALV 381 +A ++ + +G I +G+ ++ F++A A+ A Sbjct: 559 QAKTYSQKAVELDDHVPAVYVTLGRIHEAAGEHDLAVQEFQRALALDARSANALNGLAHS 618 Query: 382 HFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 + EA K+ L P V + + + K I+ + + Sbjct: 619 QESAGHVAEAEATFKKAAALRPDYWD-VYNEMGLFYDRQSKYKEAIEQLKRAVQLTPDNS 677 Query: 442 IIDNILK 448 + + L Sbjct: 678 QVYSNLA 684 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 29/321 (9%), Positives = 79/321 (24%), Gaps = 33/321 (10%) Query: 74 CIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP--FTTSLNT 131 + L + ++T + + + + D + Sbjct: 468 AVSRLARLMNIKVSADFLKTTGGSVAPAAYESYLKALGLMQRYDKPGNLDQAITALKSAV 527 Query: 132 LDPLILNQELVQIISNKKID-GLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQN 190 Q+ ++ L P Y GRI++ Sbjct: 528 ETDPRFALGYAQLGEAFRLKYNLDVNPKWIEQAKTYSQKAVELDDHVPAVYVTLGRIHEA 587 Query: 191 NAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQD--- 247 + L ++ + + H E + +A+ + Sbjct: 588 AGEHDLAVQ---------------EFQRALALDARSANALNGLAHSQESAGHVAEAEATF 632 Query: 248 -QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + ++ YD + ++L+ + ++ Y LA ++ Sbjct: 633 KKAAALRPDYWDVYNEMGLFYDR----QSKYKEAIEQLKRAVQLTPDNSQVYSNLAAVYI 688 Query: 307 SLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 A A + L D++ A +G + + + + E+A Sbjct: 689 DSA------DPKLRGDAEQALKKSIDLSPTY-FAYANLGSLYFDEKRYAEAASVLEKALQ 741 Query: 367 HSTDIASLYYYRALVHFHNEK 387 + D ++ + + + Sbjct: 742 INGDNYLVWIWLMNSYDWLGE 762 >UniRef50_A3HTU7 Probable adenylate/guanylate cyclase protein n=1 Tax=Algoriphagus sp. PR1 RepID=A3HTU7_9SPHI Length = 732 Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 115/332 (34%), Gaps = 19/332 (5%) Query: 109 KINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCN 165 N D S+A+ PF + ++++ Q I +I+ + ++ N N Sbjct: 211 WNNYTWEKDKSVAVLPFVNVDPKTPQDVYSKDITQEIISQLAEINDIKVISYSSIENITN 270 Query: 166 DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTS 223 +++ +S + + G I + + ++ ID + + ++ +L Sbjct: 271 PNLNLDSLAKILEVSTILKGSIQYLGDMTKVNVQFIDVEENKNLWTSSFTRSGQDLLRIQ 330 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFD 282 I I + + + A+ + + + L K++ ++ PES A+ F Sbjct: 331 SVIAKEISRVLGIALSAKEEAEIGKVLTSSPEAYEWYLKAKEKYSEYNPESYKVAIEYFK 390 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 + + +I T Y LA+ + L++ S + + I + ++ Sbjct: 391 KAK---EIDPNFTLAYAGLADTYSQLSMFDSSN---------AVSEKGLLIDSNSAELYK 438 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 G GQ + + FE A + + A V+ + EA + KS +L+ Sbjct: 439 TRGNTYYYLGQLENAKKSFEIAISIKPNYSEAIGNLATVNMIQGHLAEALLLQQKSTKLK 498 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKET 434 P I + + N + K Sbjct: 499 PTSFIPFQISGWI-YRILNHYDLALNWLEKAN 529 >UniRef50_Q7NN29 Serine/threonine kinase n=1 Tax=Gloeobacter violaceus RepID=Q7NN29_GLOVI Length = 995 Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats. Identities = 43/380 (11%), Positives = 98/380 (25%), Gaps = 45/380 (11%) Query: 102 SGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMA 159 N +++IA+ PF + + I+ KI L + Sbjct: 467 FWAANPFVRLLSNPPNHAIAVLPFVNLGGDKQSAYFSAGMAVDITNQLGKIADLKVIASS 526 Query: 160 -ATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIAS--NHLPV 216 A + S +TG + + + +L+D + S + Sbjct: 527 AAAQYAESPKSLGEIARELGVSSVLTGSVRREGNKVRIVSQLVDPATGEQLWSGDYDRQL 586 Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIY 275 ++ + + I + + Q N D L G++ Sbjct: 587 SDVFKIQEDVAQQIAGRLQAKLSPAEKERVTQTPTGNITAYDYYLKGREYFERGRNAEND 646 Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT 335 A+ +F R ++ + L + A+ S+ ++ + +L I Sbjct: 647 LAIELFKR---ALALEPNYALAHAALGNAYFRKAV-DYSQGDVWLEASLGASRKALAIDP 702 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFE--------------------------------- 362 G+ +G G + + + Sbjct: 703 QLGEAHRALGNGLRGKGFFRKAQDAYRRAIALAPNNAAALGSYGSVNFIRCELEEGVNWT 762 Query: 363 -QAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPN 421 +A L AR ++ ++ L P A + K + Sbjct: 763 LRAVALDPLSTPLQTNLGDFFTILGDDARARQALEAAVTLRPDDAYA-LWKWSQFYLLNG 821 Query: 422 PLKNNIKLYYKETESESHRV 441 + + + E+E ++ Sbjct: 822 NFEAARQTARRLIEAEPRQL 841 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 29/117 (24%), Gaps = 9/117 (7%) Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + L T L + L +A + L+ + D L Sbjct: 762 TLRAVALDPLSTPLQTNLGDFFTILGDD---------ARARQALEAAVTLRPDDAYALWK 812 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 L+G + + + S Y V +AR + LQ Sbjct: 813 WSQFYLLNGNFEAARQTARRLIEAEPRQLSGLYAAGDVERFAGNRSQARAYYRRILQ 869 >UniRef50_A4A737 Membrane protein n=3 Tax=unclassified Gammaproteobacteria RepID=A4A737_9GAMM Length = 758 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 38/297 (12%), Positives = 95/297 (31%), Gaps = 14/297 (4%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NFCNDHISQNSFLSRF 177 A+ PF + + + + + + +I L ++ F D+ + + Sbjct: 168 AVLPFVNLSSDPEQEYFSDGISEELLNVLAQIPALRVAARTSSFQFKGDNRDISEIAALL 227 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN--HLPVDELHNTSQFIIDNILQTVH 235 K + + G + + + +LI+A+ + + S ++++ I I + Sbjct: 228 KVGHVLEGSVRKAGTRLRITAQLIEAEGGYHLWSETYDRELEDIFAIQDEISAAIADALR 287 Query: 236 KP--ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + N + L G+ + ++I + +R + Sbjct: 288 AELALDEAMKPGASRVAANTPAYEAFLKGRALINQRGQQAISEGVEQLER---SVRLDPG 344 Query: 294 KTECYCLLAECHMSLAL----HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 LA LA +G +E ++A E + + ++ A +++ Sbjct: 345 YAPARAQLAIGIALLANSSGTYGDLSVEEVNERAGEQIAAAEALDNDFAELWAARAMLSR 404 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 ++ + E+A + + +R EA + LQL+P Sbjct: 405 INFDNRGYLENSERALAIRPNYSDALNWRVNGLNSLGMWAEASEAREALLQLDPLSV 461 >UniRef50_A7HB42 Transcriptional regulator, SARP family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HB42_ANADF Length = 636 Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats. Identities = 45/370 (12%), Positives = 100/370 (27%), Gaps = 25/370 (6%) Query: 72 TRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNT 131 RC +LR ET+ R+ + T +A+ PF Sbjct: 207 ERCRETLRRELSVAPAPET-ETLRRELA-----GETPRAEPSPTRTPGLAVLPFELLSAD 260 Query: 132 LDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + L + + + + L AA DY + + Sbjct: 261 PAHEAFARGLQEDVIGALSRFRTLRVVAPAAGRREAPA----------GVDYLLVATVRA 310 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQD 247 + L A+ + S D + + + + + L Sbjct: 311 ACGRLRVAARLAVAQGDAQLWSERFEGDLADAFALQDRVAEAVAGALALRIDEAELRAAA 370 Query: 248 QGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + + L G + L +PES A +F++ + L+ H Sbjct: 371 RLPPESLEAHALWLRGMQCLKRGSPESDLEARRLFEQ---ALARDRDYARAWAGLSLSHF 427 Query: 307 SLAL-HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + + ++A E D I+G I + + + +A Sbjct: 428 NDWSCAAWDRWDETERRAFEYAAEAIRRDPHDPVTQCILGRILLYRREFERAAEHLSRAH 487 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKN 425 + + + + A+ + + + E + + +L P + + V Sbjct: 488 ALNPNEPDVLAHLAVGYAYLGEPERGLALGEAARRLNPFHADWYLPCVAANHLVARRPGE 547 Query: 426 NIKLYYKETE 435 + L + + Sbjct: 548 ALDLLARAPD 557 Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats. Identities = 55/493 (11%), Positives = 119/493 (24%), Gaps = 65/493 (13%) Query: 22 ILTQGNEQVYI-PQKELGVLIVLLESAGHVVLKDMIIESVWKNI--IVSDESLTRCIYSL 78 + +V + +K +L L G V + + +W + SL + + ++ Sbjct: 12 EIAADGRRVSLPTRKTEALLARLALRPGEPVSRAQLAGLLWPDRPDAQGRGSLRQALAAI 71 Query: 79 RCIFEKIGYDRC-----IETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLD 133 R FE+ G ++ +G I +IA+ Sbjct: 72 RRAFEEAGAPGPSAGGDAVSLDARGVSVDVARLGAAIAGTGDLAEAIALHRGPLLAGFPP 131 Query: 134 PLILNQELVQ-IISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVT-------G 185 V+ + + L A D Sbjct: 132 VEDTFDAWVESERAVLERRMLTAIRAALARGVAGDEVLALAEVALAIDPAFEEGWRARMR 191 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 + E + + P E + + + P R+ LA Sbjct: 192 ALAARGDRAGALREYERCRETLRRELSVAPAPETETLRRELAGETPRAEPSPTRTPGLAV 251 Query: 246 QD-QGYKNHYLSDEMLAGKKE-----LYDF-----------TPESIYRAMTIFDRLQNK- 287 + + G +E L F E+ + Sbjct: 252 LPFELLSADPAHEAFARGLQEDVIGALSRFRTLRVVAPAAGRREAPAGVDYLLVATVRAA 311 Query: 288 ---------SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALEL------LDYVSD 332 + + + E ++ A + + A AL L L + Sbjct: 312 CGRLRVAARLAVAQGDAQLWSERFEGDLADAFALQDRVAEAVAGALALRIDEAELRAAAR 371 Query: 333 ITTVD--GKILAIMGLITGLSGQAK---VSHILFEQAKIHSTDIASLYYYRA------LV 381 + L + G+ G + + LFEQA D A + + Sbjct: 372 LPPESLEAHALWLRGMQCLKRGSPESDLEARRLFEQALARDRDYARAWAGLSLSHFNDWS 431 Query: 382 HFHNEKIEE----ARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 ++ +E A ++++ +P I + + + + Sbjct: 432 CAAWDRWDETERRAFEYAAEAIRRDPHDPVTQCI-LGRILLYRREFERAAEHLSRAHALN 490 Query: 438 SHRVIIDNILKLK 450 + + L + Sbjct: 491 PNEPDVLAHLAVG 503 >UniRef50_Q022M7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q022M7_SOLUE Length = 579 Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats. Identities = 57/403 (14%), Positives = 124/403 (30%), Gaps = 31/403 (7%) Query: 67 SDESLTRCIYSLRCIF-----EKIGYDRCIETIYRKGYR-----FSGQVFKTKINEDNTS 116 +D + LR E+ D + + + GY K + S Sbjct: 76 NDPIVRVQARRLRAQLARYYREEGQEDELVIEMPKGGYAPIFRPLKSAPAKRPTSPALVS 135 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSR 176 ++A+ PF D + L Q I + G+ + A+N + + Sbjct: 136 RNTVAVLPFADHSPGGDQRYFCEGLCQEI-IHVLAGMDAIRLVASNHAAESAAM------ 188 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTV 234 +TG I + + ++DA + S + ++ + + + + + + Sbjct: 189 -----VITGSIRLAGSEVRITTNIVDAAADCYLWSGSIDRKLENIFVLQEEVARAVAEQL 243 Query: 235 HKPERSVRLAK-QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + A+ + +N + L G+ L T E + +A+ FD+ Sbjct: 244 KLQLAGGQTARGSGRPTENLTAYNLYLQGRYHLNQRTEEGLRKAVEFFDK---AIVEDAQ 300 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSG 352 Y LA+ + L +G + + + + + + Sbjct: 301 YAHAYSGLADAYSLLGHYGVLAPADVWTRTASNAAWAVLQDEHSAEAHTSLAHVKSTQDW 360 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALV-HFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 + F++A + +++ A+ ++EEAR + + +L+P Sbjct: 361 DWLGAEREFQRALSLDPRYPTAHHWYAVSCLAPMGRLEEAREEMSLAQELDPISSIIAR- 419 Query: 412 KECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTR 454 Y + + E H IL L Q R Sbjct: 420 DLARVHYYRQDFEAALDQCDHTIELNPHFSPAYWILGLVQEQR 462 >UniRef50_A4ABU1 Adenylate cyclase protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABU1_9GAMM Length = 707 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 39/340 (11%), Positives = 93/340 (27%), Gaps = 19/340 (5%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSFLSRFKPD 180 PF +T D + + + S KI L + + + + + D Sbjct: 153 PFAHLGSTEDGEFFAKGVHDDLLTSLSKISTLRVISRTSVLQYADTTKAIPDIGRELRAD 212 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD----ELHNTSQFIIDNILQTVHK 236 + G + + +LIDA++ + + + + I I + Sbjct: 213 AILEGGVRVAGNQIRINAQLIDARSDEHLWAETFDRELSANNIFEVQSEIARAISTALQT 272 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI---FDRLQNKSDIQTL 293 D ++ + E+ + A T+ + L+ + Sbjct: 273 TLTEDDSDSLDIIPTSNLAA---YRAYHEIMQWRDTIHLNATTLPTFAEGLEKAFTLDPE 329 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SG 352 T L + A + EL+ + +I Sbjct: 330 FTRPMVELVNALALRMFRN--PDKEALPRVEELITRIGEIAPDSADHYTAQSFYFYYVLE 387 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV--- 409 + ++ L E+A+ + L ++ + E ++ QL P + Sbjct: 388 DYERANALIEKAQTRAPSDPKLVSIQSWIQRRQGDFEGWLASAKRAYQLAPTDAELGRSL 447 Query: 410 VIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 V++ V K + + + ++ + L Sbjct: 448 VVRLMVMHRYDEAKKQAELVANTLETEDPNLAMLRSQLAF 487 >UniRef50_A3X527 Transcriptional regulatory protein-like n=1 Tax=Roseobacter sp. MED193 RepID=A3X527_9RHOB Length = 672 Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats. Identities = 49/351 (13%), Positives = 110/351 (31%), Gaps = 15/351 (4%) Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NFCNDHISQNSF 173 +AIFPF +++ ++ L Y T F + S Sbjct: 277 PPKLAIFPFVDLGPVPVESFFLHGILEDTVSLLAQLRELQVYSSNTTRQFQGLPGAPGSQ 336 Query: 174 LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNIL 231 DY VTG + + ++L+D + + +N EL + I N+ Sbjct: 337 PPELNADYVVTGSVRGAGDRFRITVQLVDTRTGLVEWANTYAAHASELFDMQTDIAINLT 396 Query: 232 QTVHKPERSVRLAKQDQGYKNHY-LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 + + L + + M+ G+ + P++ A ++ + Sbjct: 397 HQLLPSVSAAELRRTEGSLPEDLSAYHLMIRGRDIAFHLDPKTFITAKSLLE---EACAR 453 Query: 291 QTLKTECYCLLAECHMSLALHGKSELELAAQKALEL-LDYVSDITTVDGKILAIMGL-IT 348 L + H L G S+ +A +AL+ + ++ G+ LA T Sbjct: 454 DPRYGISRVALTDWHSVLLGQGWSKDPVADGRALQSTTEEAVRLSGESGRALARYAHNQT 513 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 L G A+ + + +A ++ + A + + + + E ++QL P Sbjct: 514 VLFGYAEQAIEICSRALRNAPNDAEALLWSSPTLTFSGQPEAGIKNARAAIQLSPCDPYL 573 Query: 409 VVIK--ECVDMYVPNPLKNNIKLYYKETESESHRV--IIDNILKLKQLTRI 455 + + + + + + + + L + + Sbjct: 574 FRSEHFLSIAYFAAGNYAEAVAAGRRAQRLNPNYTSNLRMTAVALAETGEV 624 >UniRef50_C4K6C4 Invasion protein transcriptional regulator n=1 Tax=Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) RepID=C4K6C4_HAMD5 Length = 275 Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 129/269 (47%), Gaps = 6/269 (2%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L + Y F E T D +L+ N+ V +P KE +L++LL+SAG ++ KD +E VW Sbjct: 5 LSHSEKYIFGEFTL-TADALLSYKNKIVKVPPKEFSILMLLLDSAGVLISKDDFLEKVWP 63 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 N VS+ESLTRCIY LR + + +R I+T+Y KGYRF V T+ S S+A+ Sbjct: 64 NEFVSEESLTRCIYVLRRLLHENKNNRYIDTVYGKGYRFIQPV--TQSERFAESQCSLAV 121 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 PF D L+++ L+Q +S GL P N C D+ FL + KP+Y+ Sbjct: 122 LPFKL-PQHFDSLMIHDFLIQSLSKYTYSGLNVLPSTLINSCKDYDGIMCFLEKMKPNYY 180 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV-DELHNTSQFIIDNILQTVHKPERSV 241 ++ + +++L IELI + ++ + D +H T + I + + + S+ Sbjct: 181 LSAHTINDGDISSLRIELIRTHDHSIVHREKFDLCDNVHLTCLNLQGVIHKLLARHIPSL 240 Query: 242 RLAKQDQGYKNHYLSD-EMLAGKKELYDF 269 + + L + Y Sbjct: 241 NKKSSSVPVMKEFDTTFAYLNAHHKFYSH 269 >UniRef50_A6GH84 Serine/threonine protein kinase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GH84_9DELT Length = 802 Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats. Identities = 40/369 (10%), Positives = 111/369 (30%), Gaps = 17/369 (4%) Query: 93 TIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKI 150 T + + T ++A+ PF D + + L + + Sbjct: 309 TTAATQHSQHSLAWTTPATPTVPRGRALAVLPFR-FRGPSDQAYIAEGLGDELIDVLSTM 367 Query: 151 DGLYTYPMAATNFCND--HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFL 208 GL AT + S + D V G + + + + L+D + F Sbjct: 368 RGLRVSGSGATARFGEGNDRDPRSVGTELGVDVLVDGTMQLSGSRVRISARLLDVSSGFQ 427 Query: 209 IASNHLP--VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKEL 266 + S ++++ + I + + + +G + L ++ Sbjct: 428 LWSERYDGTLEDVFALQDTMGKRIAEALRLELEDI----AHRGGAPAEAIEAYLRARRLA 483 Query: 267 YDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALH--GKSELELAAQKAL 324 + + A+ ++DR ++ A ++ ++ + A Sbjct: 484 RTWDWKGPEGAVALYDRC---IELAPEFKPALAGRAIAYLRAWFLPSWDADEPDWEKLAA 540 Query: 325 ELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH 384 E++ + + + G+ K + + + A + Y + Sbjct: 541 EVVAEALEGAPELAETHLAAAIHGVQCGEYKQAANSLATSLRIAPTYADAHAYLGRLQLE 600 Query: 385 NEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIID 444 + + I+ +++LEPR +++ + L + + +S V + Sbjct: 601 AGRARQGIAHIELAIELEPRNI-WSLVEVARYRALHGDLDGFEEEMRRFHQSTGRDVDVA 659 Query: 445 NILKLKQLT 453 + + ++ Sbjct: 660 SAVLELRVG 668 >UniRef50_Q47YV7 Putative adenylate cyclase n=1 Tax=Colwellia psychrerythraea 34H RepID=Q47YV7_COLP3 Length = 686 Score = 164 bits (414), Expect = 8e-39, Method: Composition-based stats. Identities = 51/347 (14%), Positives = 101/347 (29%), Gaps = 27/347 (7%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT-NF 163 + D +IA+ PF + + I S KI L ++ F Sbjct: 112 FFTFQINEKLDLTIAVLPFKDMSPGGTQQYFGDGIAEEILNSLTKISSLKVIARTSSFQF 171 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHN 221 N+ N + + + G I ++ + +LIDA I S + ++ Sbjct: 172 RNEKKDINQIGKQLGAQFILEGSIRKSEDKLRVTAQLIDATTQHHIWSETYDKKLTDVFV 231 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD-EMLAGKKELYDFTPESIYRAMTI 280 + I Q + L ++ + L + TP I A + Sbjct: 232 LQDQLTFAITQALKLNILKGDLQSSALAKSDNPEAYKLYLKSLPLFHQRTPSGIKDAEKL 291 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 ++ ++ L + + ++ + A L+ + + Sbjct: 292 LEK---AIELDHDFLLAKAQLYNLYARYNRYIRALNIEQQKNAELLIRDLLSSPEKFAEK 348 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASL---YYYRALVHFHNEKIEEARICIDK 397 +G+ G S F+ + + L Y Y A ++ H + + Sbjct: 349 SMAIGMWLSGEGYNVQSIEYFKHSVSEFPSSSELKFIYAYYANIYSHLSRNDI-IEMHKS 407 Query: 398 SLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIID 444 L +P + N + LY KE R +ID Sbjct: 408 VLSKDPLN--------------TSSRSNLMSLYQKENRLAEMREVID 440 >UniRef50_A3WEA4 Adenylate cyclase n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WEA4_9SPHN Length = 775 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 68/507 (13%), Positives = 155/507 (30%), Gaps = 70/507 (13%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 +DL + + L +T + + + K + VLI L G ++ +D +I+ Sbjct: 19 VDLAHHGDFRLGSILVQPSLRRITGPDGERMLEPKVMQVLIALSSPVGTILSRDDLIDRC 78 Query: 61 WKNIIVSDESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYS 119 W +V D S+ R I LR + G +E + + GYR + + E D Sbjct: 79 WDGRVVGDTSINRVISILRTGLREVAGDAAVVENVPKVGYRIVVREAPDDVLEKPAPDVI 138 Query: 120 IAIFPFTT--------------------------------------SLNTLDPLILNQEL 141 + T+ +L E+ Sbjct: 139 EQPTKPKVAATRRLQANRRATIIIAGALAVLALVGAAIWLKPFAGGPVGTVRMAMLPLEI 198 Query: 142 VQIISNKKIDGL---------------YTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 + + GL T +A +++ ++ + +GR Sbjct: 199 SEGVDPIYAAGLESELRAEFARVGAMEVTASESAKLLLGENLEPAEIGTKLGVQFVWSGR 258 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQ 246 L + +++++ + S V+ +++Q + + V A Sbjct: 259 FEVEAERIVLDVNVVNSETGETVLSQS--VNSATDSAQSLPFRTARAVATALDRPVRATA 316 Query: 247 DQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 Q + L L + + A I + + + + + LA + Sbjct: 317 TQETISASDFRLYLVATGLLKTRGQDQVGAAREILELV---TARNGDFADGWGALAMAYF 373 Query: 307 SLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 S++E KALE + I L + G + A+ + + Sbjct: 374 LQRPSDPSQIEGNLAKALETAEKAVAIEPNTIGALKVFG---MSAKDAETALASLGRVVK 430 Query: 367 HSTDIASLYYYRALVH-FHNEKIEEARICIDKSLQLEPRRR----KAVVIKECVDMYVPN 421 + +++ +V + ++++P + + E DM + Sbjct: 431 LDPGDSEGWFWLGIVQRRFVLDGADPLTSARTMIEIDPLWPPSWNGSTLAAEFGDMQMAR 490 Query: 422 PLKNNIKLYYKETESESHRVIIDNILK 448 ++ +I + + S R++++ L Sbjct: 491 EMEQDI---LAASVTPSQRLLVEARLA 514 >UniRef50_Q1ILY3 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1ILY3_ACIBL Length = 878 Score = 163 bits (412), Expect = 1e-38, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 97/337 (28%), Gaps = 17/337 (5%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS------NKKIDGLYTYPMAATNFCND 166 + + IA+ PF + + L+ ++ + L+ P + + Sbjct: 348 PSNTVEHIAVLPFDNASGDPSNEAIAAGLMDSLTGELSNLSAGKQTLWVVPASVVR-AHK 406 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQ 224 + V G I N L ++LIDA+NL I S L ++ Sbjct: 407 ISDPTAAAKVLGASLVVKGSIQHNGDDVRLRVDLIDARNLRQIGSATLEDRTGDIGALQD 466 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES-IYRAMTIFDR 283 + + ++ + + + G + + L + + + +A+ ++ Sbjct: 467 EAVVRLAGLMNIKLST-EMLRATGGRGSPASYELYLRALGYMQRYDKAGNLDQAIEDLNQ 525 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + + L EC+ + + +AL L + + Sbjct: 526 ---SIHLDPQFALGFASLGECYRLK--NVVDPKQKWVDQALANLQHAMQLNDRVAAPHVS 580 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + GQ ++ +++A + + + + +A +++ L P Sbjct: 581 LAWLQSALGQHDLALQEYQKALAINPRDPEAVKGLSREYERAGRTADAEAGFKQAILLRP 640 Query: 404 RRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 I + + + Sbjct: 641 DYWD-SYNALGSFYVRQQRYPEAIAQFRRVLDLTPDN 676 Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 71/270 (26%), Gaps = 57/270 (21%) Query: 228 DNILQTVHKPERSVRLAKQD----QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 + + + ER+ R A + Q + Y + A+ F R Sbjct: 610 EAVKGLSREYERAGRTADAEAGFKQAILLRPDYWDSYNALGSFY-VRQQRYPEAIAQFRR 668 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 + D+ + Y +A + + + ++A L D++ A Sbjct: 669 V---LDLTPDNSAAYSNVAGVLLLIG------DPASQKEAETALRRSLDLSPSYA-AYAN 718 Query: 344 MGLITGLSGQAKVSHILFEQAKIHS----------------------------------- 368 +G + + + +A + Sbjct: 719 LGRLYMSQKRYAEGVDITRKALSMNDQNYEVWANLTVMLQWMHDDVGAADSRAHTFALLK 778 Query: 369 ------TDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNP 422 + A+ + A + A ID +L L+P V+ Sbjct: 779 PYVVAHPEDANAHSSLATHYAKAGDRTNAMREIDAALGLQPHD-STVLADAAEVYEDFGD 837 Query: 423 LKNNIKLYYKETESESHRVIIDNILKLKQL 452 K I K ++ + + +L+QL Sbjct: 838 RKRAIDFAQKSLKNGNSLDDLQVRPELQQL 867 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 22/186 (11%), Positives = 44/186 (23%), Gaps = 3/186 (1%) Query: 214 LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES 273 V +L + N+ + + + + A L Sbjct: 667 RRVLDLTPDNSAAYSNVAGVLLLIGDPASQKEAETALRRSLDLSPSYAAYANLGRLYMSQ 726 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 A + + S E + L M +H + LL Sbjct: 727 KRYAEGVDITRKALSMNDQNY-EVWANL--TVMLQWMHDDVGAADSRAHTFALLKPYVVA 783 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D + + +G + + A +++ A V+ + A Sbjct: 784 HPEDANAHSSLATHYAKAGDRTNAMREIDAALGLQPHDSTVLADAAEVYEDFGDRKRAID 843 Query: 394 CIDKSL 399 KSL Sbjct: 844 FAQKSL 849 >UniRef50_Q1GF82 Tetratricopeptide TPR_2 n=1 Tax=Ruegeria sp. TM1040 RepID=Q1GF82_SILST Length = 375 Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats. Identities = 34/321 (10%), Positives = 87/321 (27%), Gaps = 8/321 (2%) Query: 123 FPFT-TSLNTLDPLILNQELVQIIS--NKKIDGLYTYPM-AATNFCNDHISQNSFLSRFK 178 PF + + + + + I+ + + ++ F + Sbjct: 1 MPFRVLHFAEPEETVFAEGISEDITTELSRFHAIRITSRMSSFQFNASERPAQEIATTLG 60 Query: 179 PDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDE--LHNTSQFIIDNILQTVHK 236 D+ ++G + + + +EL + I S + + I + + Sbjct: 61 ADFILSGTVRRALNRIRVVVELYETLEDRQIWSERFDRADADIFAVLDEISGLVAACMTG 120 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + + + E L ++L+ S A D Sbjct: 121 EVQLAETRRTKAKAGQDLTAYEALLVGQDLHKSGDISPRVATRAVAAFSEAIDAAPDFAR 180 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 Y A C S + + + + + + + I G + + Sbjct: 181 AYAWRA-CSFSRTWDFPVRQDQ-FDQVSQDVFKALEFDPAEAEAHRIAGAVCRALHEFDR 238 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 + + E+A + A + A + + A I+K++ L P + Sbjct: 239 ATLHIEKALELNASDAHIAAKSAEHFAFIGQPQRAHDLINKAMALNPMFSGWYWEIIALA 298 Query: 417 MYVPNPLKNNIKLYYKETESE 437 YV + + + + Sbjct: 299 DYVASQYEEALAAITRAASPT 319 >UniRef50_A3WHL2 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WHL2_9SPHN Length = 665 Score = 161 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 43/334 (12%), Positives = 98/334 (29%), Gaps = 18/334 (5%) Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSR 176 S+A+ F D + + L + + + L ++N + + Sbjct: 210 SMAVLRFANLTGGEDQIWFSDGLSNELRQALSRNPRLRVSAPTSSNASDGDDDF-AIGLA 268 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTV 234 + G + Q +Y EL++ + S ++ + I + ++ Sbjct: 269 LGVSSILRGNVQQVGETVRIYAELLEVDGGVVQWSESYDRNFSDVLGLQKEIAAAVALSL 328 Query: 235 HKPERSVRLAKQDQ-------GYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 S R A+ G ++ + L G+ E I R + D+ Sbjct: 329 VARIASDRAARSSVEEQEGVGGTEDVRAYEAFLRGEALYALGPGEEIKR--SALDQYDVA 386 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELE--LAAQKALELLDYVSDITTVDGKILAIMG 345 + A ++A E +++E +I K +G Sbjct: 387 IGFDPQYAAAHARRANTLAAIANSASDPDEVGRLFDQSIEAARRAIEIAPDYAKGHLALG 446 Query: 346 LITGLSG-QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 + ++ +++A+ + A A + + A I++ ++L+P Sbjct: 447 YVLNFGRMDRAGAYPHYKRAEELAPGDADTMRSVATFYSFGNQRALAMQMIERVVELDPL 506 Query: 405 RRKAVVIKECVDMYVPNPLKNNIKLYYKETESES 438 A V ++ I K E Sbjct: 507 NALAFRSAGFVALF-AGAFDQAIAYMEKALELNP 539 >UniRef50_C1F8Q5 Non-specific serine/threonine protein kinase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F8Q5_ACIC5 Length = 877 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 49/342 (14%), Positives = 107/342 (31%), Gaps = 16/342 (4%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQIISNK------KIDGLYTYPMAATNFCNDHI 168 +A+ PF+ +T D L L++ ++N+ + L+ P + Sbjct: 350 PEQQHVAVLPFSGVESTPDQAALAAGLMESLTNRLANLSTRNPSLWVVPASEVR-RRKIN 408 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFI 226 + + L + V G + ++ +L +ELIDA +L + S L ++ + Sbjct: 409 APGAALKELGTNLVVEGSVQRSGLSTSLQVELIDAAHLRELGSVTLNSTDGDVASLETRA 468 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 + ++ + +H SV Y G E YD ++ +A+ + + Sbjct: 469 VASLARMMHVHMPSVSGDSAGSASPVAYQDYLTALGYVERYDQ-AGNLDKAINLLQQ--- 524 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 Y L + E ++A + + +G Sbjct: 525 AVQSDPAFALGYAELGFADWTKYSMQ--PNEQWLRQAQANCMRAIQLDSSLPASYVTLGN 582 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 + G+ ++ F++A A A VH + + ++A+ ++ L+P Sbjct: 583 VYRAQGKQDLALEQFQRAMQLDPRNADALDGLARVHENAGRFQDAKAEFVRAANLQPDSW 642 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 + I Y + L Sbjct: 643 D-GYNALGMFYDRQGKYPQAIAAYQSARAITPDNATVLLNLA 683 Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 29/292 (9%), Positives = 71/292 (24%), Gaps = 79/292 (27%) Query: 175 SRFKPDYFVTGRINQNNAVNTLYIEL------IDAKNLFLIASNHLPVDELHNTSQFIID 228 S Y G + + L +E +D +N + + + Sbjct: 571 SSLPASYVTLGNVYRAQGKQDLALEQFQRAMQLDPRNADALDGLARVHENAGRFQDAKAE 630 Query: 229 NILQTVHKPER-------------------SVRLAKQDQGYKNHYLSDEMLAGKKELYDF 269 + +P+ ++ + + + + Sbjct: 631 FVRAANLQPDSWDGYNALGMFYDRQGKYPQAIAAYQSARAITPDNATVLLNLAGAYEDQG 690 Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 P S+++A + R + + L + E +A++ L Sbjct: 691 DPASLHKAEGLLRR---SLALHPTYA-GWANLGNLYYL---------EHRFPEAVDALRR 737 Query: 330 VSDIT-----------------------------------------TVDGKILAIMGLIT 348 D + + Sbjct: 738 ALQFNAANYLVWDDLRGSCEWVKDKACVQSTSEKEKQMLRTYVKNHPHDAVAVVSYADLL 797 Query: 349 GLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 +GQ ++H + A S D S A+V+ + +EA ++++L+ Sbjct: 798 AQAGQNSLAHNYIQTALAISPDDPSTLEAVAVVYENLGNRKEAVRYLNQALR 849 >UniRef50_B1ZFX8 Transcriptional regulator domain protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZFX8_METPB Length = 404 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 104/357 (29%), Gaps = 13/357 (3%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA-TNF 163 + S+A+ PF D L L + + + GL+ + F Sbjct: 1 MAPPSLPLPDRPSVAVLPFADPEGDFDTQALADGLSEHVTDALACTPGLFVSARNSAFTF 60 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTS 223 + + R + +TG +++ + L A + L DE Sbjct: 61 KGRAVPPDEAAGRLGVAHVLTGTLSRTGTRLQVRARLHRAAAETPVWMQDLDADEG-ALH 119 Query: 224 QFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDR 283 + TV + L + + + S Sbjct: 120 ALRSRIVAATVAAVAPGLALDAAPERAGPPLDAGVYAPFLSAYANHAMPSAESVRLRIAS 179 Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTVDGKILA 342 ++ + Y LLA+C+ +L + G S A + L + D +L Sbjct: 180 IEAVRRLVPEHPLPYALLAQCYTNLVVQGWSPDAAADCAEGARLARLALERDAGDPAVLM 239 Query: 343 IMGLITG-LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 + G L+ + L +++ + + A+ Y V + + + A + + Sbjct: 240 MAGHTLAFLAQDYDAALDLLDRSLALNPNSAAAYERSGWVRCYVGEADGAAAHFRAAKRQ 299 Query: 402 EPRRRKAVVIK--ECVDMYVPNPLKNNI-----KLYYKETESESHRVIIDNILKLKQ 451 P + + + + + + + T + +HRV + L + Sbjct: 300 SPLDPTTFRFESGLGLALCMAGAHEEALAWLDRSMAEDPTWTSTHRVRAATLAWLGR 356 >UniRef50_Q6W1E3 Putative uncharacterized protein n=3 Tax=Rhizobiaceae RepID=Q6W1E3_RHISN Length = 589 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 31/337 (9%), Positives = 87/337 (25%), Gaps = 15/337 (4%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 PF T I+ + L + K + + +S Y Sbjct: 201 PFEDLSRTGSSDIVARGLTDKVIEQISKFKEIVVIAGHSPEPSGQT---HSSGDAMAARY 257 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHL----PVDELHNTSQFIIDNILQTVHKP 237 ++G + + L L+ + ++ + V + + + + P Sbjct: 258 ALSGGVRLDGDKLRLTTRLVKRDDGSVLWAESYSESLQVRSHLDLETNVARAVATALAHP 317 Query: 238 ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR-AMTIFDRLQNKSDIQTLKTE 296 + A + E Y + + + + L+ + Sbjct: 318 YGVIFRADASKAANMPPDDWEAYQCTLLYYGYRADLNPQTHTAVQGCLKRAVERFPGYAT 377 Query: 297 CYCLLAECHMSLALHGK---SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 + LL+ ++ + A+ ++ + + L L G Sbjct: 378 AWALLSLTYIDQLRFRHRLDAPSPSPLDLAIGAARRAVELDPQNVRGLQAEMLAFFFRGD 437 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + + +A + + L L + + + + +++ P Sbjct: 438 VDTALKIGSRALALNPNDPELRAEYGLRLALSGEWKTGCALVAEAVSRNPGPIGYFEATL 497 Query: 414 CVDMYVPNPLKNNIKLYYKET--ESESHRVIIDNILK 448 + Y+ + + + +I+ IL Sbjct: 498 ALCSYMQQDYATAEQWIRAADVQANPLYHLIVAAILG 534 >UniRef50_Q1MM50 Putative uncharacterized protein n=4 Tax=Rhizobium RepID=Q1MM50_RHIL3 Length = 643 Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats. Identities = 49/333 (14%), Positives = 97/333 (29%), Gaps = 12/333 (3%) Query: 124 PFTTSLNTLDPLILNQELVQIISN--KKIDGLYTY-PMAATNFCNDHISQNSFLSRFKPD 180 P L LV+ I+ + L P +A + +Q +F R + Sbjct: 269 PPRNQSIHPQAGFLAASLVEDITIGFCAFNSLQVIAPYSAVQIGHHMETQKAFFERHHVN 328 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQF--IIDNILQTVHKPE 238 Y + RI+ TL+ +LI ++ + +D + I ++ Sbjct: 329 YILDTRISNAGDDVTLFAQLIFFDQNQIVWAERFSLDHRDLVKDRRTVSRRIALSI---S 385 Query: 239 RSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + + + N L G++ L T ++ RA ++ + Sbjct: 386 SEIERHEALREDLNPAAYHRYLVGRRHLARLTLPNLRRARK---EMKAALSVSPDFAPAL 442 Query: 299 CLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSH 358 +A + L + A L ++ G+ L G S Sbjct: 443 SSMARTYSKEWLLTARGDIDLLKTAETLATQATETRPDFADGYREFGVAKLLQGAFDQSA 502 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMY 418 E A+ + A + A H A I+++++L P Y Sbjct: 503 EAMEVAESLAPHYADVIADYADTLVHCSLPAIALRKIERAIELNPLSPDTYFWTAAGANY 562 Query: 419 VPNPLKNNIKL-YYKETESESHRVIIDNILKLK 450 + ++ S + R+ N L Sbjct: 563 ALGEFEASLDYIGQMADASLADRLAAANWAMLG 595 >UniRef50_A4YMM9 Putative uncharacterized protein n=2 Tax=Alphaproteobacteria RepID=A4YMM9_BRASO Length = 576 Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats. Identities = 48/370 (12%), Positives = 119/370 (32%), Gaps = 13/370 (3%) Query: 82 FEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQEL 141 + G+ R ++ + + +I++ PF T + D +L L Sbjct: 147 IRESGFVRWLDAMRLNPEQIYSLYSVRSQPPPPPMLPAISVLPFRTIGGSPDDAVLGDWL 206 Query: 142 VQII--SNKKIDGLYTYPMAATNFCN-DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYI 198 + S + + + ++ N + + R DY V G + L Sbjct: 207 AEEACRSLSRSNLIAVISHWSSRSINVQMVDVATIRERLAVDYCVAGTLRIRGDEIVLDA 266 Query: 199 ELIDAKNLFLIASNHL--PVDELHNTSQFIIDNILQTVHKPERSVRLAK-QDQGYKNHYL 255 + +D + ++ + ++ + + I+ V + +A D+ Sbjct: 267 DFLDVVSGRILWTRQFLGGLNSFLGRTSEGVSEIVTAVGRTIADDAIAHVSDRRLTEVAD 326 Query: 256 SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS- 314 +LAG ++ + + R+ + + E + + H+ +G S Sbjct: 327 HRLLLAGVGLMHRPSLRAFARSRDLIE---EALRRAPHAAEAHAWHGKWHVLSVFNGWST 383 Query: 315 ELELAAQKALELLDYVSDITTVDGKILAIMGLITG-LSGQAKVSHILFEQAKIHSTDIAS 373 + Q A++ DI L I G L + V+ + A + + + Sbjct: 384 DPAKDTQHAIDCTARALDINPESAFALTIDGFAHNNLLRRMDVAGDRYNAALKRNPNESL 443 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK--ECVDMYVPNPLKNNIKLYY 431 + R+ +H ++ + A + +K+ +L P + ++ + + L Sbjct: 444 AWLMRSALHAFRDEPDAAVVAAEKARRLSPIDPFQYYYESLSATALFAADRYGEALDLAE 503 Query: 432 KETESESHRV 441 + V Sbjct: 504 RSLLRHDRHV 513 >UniRef50_A6UBL5 Transcriptional regulator, SARP family n=3 Tax=Rhizobiaceae RepID=A6UBL5_SINMW Length = 612 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 46/343 (13%), Positives = 99/343 (28%), Gaps = 12/343 (3%) Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHI 168 +A+ P + ++ +V+ I+ + + D Sbjct: 228 TPPVAPAPRVALLPPAAFGSDPMLHAVSMAVVEDITIGLCALRSMSVVAPYTAERIRDAA 287 Query: 169 SQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQ--FI 226 + +FL + Y + R++ L+ +LI + ++ + + + Q I Sbjct: 288 DKAAFLEKHAVTYALDCRMSDQG----LFTQLIFLPSDAIVWAERFSISPVGLLQQRQEI 343 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 ++ V + + R+ D N LAG + L + I RA F + Sbjct: 344 AFHVASAVAEQVETGRIGHLD-YVTNPDAYYAYLAGLRNLSNVGLPEIRRARRDF---KT 399 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 + +A + + + A + G+ Sbjct: 400 ALRHKPDFAPALSGIARTYAIEWVLTARGDQELLTVAERHAKEAIESDEELPGAHREFGV 459 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 + G S ++A+ S A + Y A H + EA + K+L L P Sbjct: 460 VRLYQGDLDGSLAALDRAENLSPHYADVLYSHADTLVHASRPREALDKLGKALSLNPLAP 519 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 Y ++ I K + ++ + Sbjct: 520 DMYFWSAAGASYFLEEYEDAIGYVQKMKDKSPGDRLLAASWAM 562 >UniRef50_B7RJ20 Adenylate cyclase Cya3 n=2 Tax=Proteobacteria RepID=B7RJ20_9RHOB Length = 415 Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 86/253 (33%), Gaps = 13/253 (5%) Query: 87 YDRCIETIYRKGYRFSGQVFKTKINEDN---TSDYSIAIFPFTTSLNTLDPLILNQELVQ 143 +R ++ I RK F + + SIA+ PF + D +V+ Sbjct: 157 GERVLKNIARKVRVFRWPDTQARDAPQRLALPDKPSIAVLPFDNMSSDPDQEYFADGVVE 216 Query: 144 II--SNKKIDGLYTYPMAA-TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIEL 200 + + +I + + + H++ Y + G + + + ++L Sbjct: 217 GLTAALSRIGSFFVIARNSAFAYKGRHLNVIDIGRELGVGYALEGSVQRAGGKLRITVQL 276 Query: 201 IDAKNLFLIASNHLPVDE--LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-LSD 257 ++ + + + L + I + + + + + + + + D Sbjct: 277 VETTTGAHLWAEKYDGADSELFDLQDRITEQVAGALQPSIQKAEIDRSTRKRPHDMGAYD 336 Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 + + ++ E +A+ + ++ I L A C +++ S+ Sbjct: 337 YAMRAMRHVWMQEKEESAKALVLLEK---ALQIDPEYPLALALSAWCWSQHSVYNWSDDI 393 Query: 318 LAAQ-KALELLDY 329 +A + +AL++ + Sbjct: 394 VAVKARALQMAEK 406 >UniRef50_A4ABU0 Adenylate/guanylate cyclase protein n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABU0_9GAMM Length = 697 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 37/343 (10%), Positives = 85/343 (24%), Gaps = 12/343 (3%) Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQI--ISNKKIDGLYTYPMAATN-FCNDHISQNSFL 174 IA+ PF D + IS KI L + + Sbjct: 137 PMIAVLPFAQLGGGEDGEFFALGVHDDLLISLSKIKNLRVVSRTSVMEYAKTTKQIPEIG 196 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP----VDELHNTSQFIIDNI 230 + G + + +LIDA + + + + + I Sbjct: 197 KELGASVILEGGVRIAGGQIRMNTQLIDASTDAQLWAETFDRALTAENIFAVQTEVTRAI 256 Query: 231 LQTV-HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + + Q +N + + P +L++ Sbjct: 257 TSALRLTLSPKEESDLKKQPTRNLAAYRAFHNAMQFARSYNPGFANYRENYEKKLEDAIA 316 Query: 290 IQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 + + T L + + + E + EL+ + + + + Sbjct: 317 LDSQYTRPIMELVGSLAQR--NQREQNETDIARIEELIARIQTLDPGSSEAITAEAYYFY 374 Query: 350 L-SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 + L +A+ + L ++ + E ++ LEP Sbjct: 375 YVLRDFDRADELIARAQSLNPSDTRLLEIQSWIKRRKGDWEGFVETARRATLLEPNDLS- 433 Query: 409 VVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ 451 + V + + ++ I N L+L + Sbjct: 434 HKATLVRRLMVVHDYAEAQAVVLAAGQANLEIAIFRNQLELSR 476 >UniRef50_A5P6N6 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P6N6_9SPHN Length = 653 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 33/347 (9%), Positives = 96/347 (27%), Gaps = 13/347 (3%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDG--LYTYPM-AATNFC 164 + + + +A+ F + + + I G L ++ F Sbjct: 140 PEFTRPTSREPLLAVMAFDNFSADAELDFFCDGISEEIQRTVASGSSLKVVARASSFQFR 199 Query: 165 NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDELHNT 222 S + + G + + + EL++ I ++ +D++ + Sbjct: 200 GSAKDTARVASALGATHLLDGSVRRAQNRVRISAELVECTTRSAIWADRFDGDLDDVFDL 259 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 + I + + + + R + + + + + + + P Sbjct: 260 QERIAEKVAEALKVALVPTRKEEA----LDPASYEAYMRARGIMAEGDPLFDDAYRESIP 315 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQK--ALELLDYVSDITTVDGKI 340 L+ + LAEC G+ + + ++ + G Sbjct: 316 LLERVVAAAPNFAAAWESLAECRAWTLRSGRYDKAYHIGRDGVIDAARTALRLDPKSGGA 375 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + ++ G L +A S + + + + + +++ + Sbjct: 376 YVALAMLEPW-GAYSQREALLRKALEVSPRDTAALTDMSTFCWSVGRFRDGLRYAERACE 434 Query: 401 LEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNIL 447 L P A + + YV + + ++ + I L Sbjct: 435 LNPLMPSARLNVAQMRAYV-GDIDICVAMHEQLHRQWPDNPGILISL 480 >UniRef50_C5SN08 Transcriptional regulator, CadC n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SN08_9CAUL Length = 651 Score = 157 bits (397), Expect = 8e-37, Method: Composition-based stats. Identities = 66/486 (13%), Positives = 144/486 (29%), Gaps = 48/486 (9%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L + +T+ + I + + VL +L G VV +D ++++ W Sbjct: 5 LAQLTDLNIGRLRVKPAACEVTRETKVWVIEPQVMRVLALLGLHHGQVVSRDDLVKACWD 64 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 VS++++ R + LR + G I T+ + GYR +T E T+ Sbjct: 65 GRAVSEDAINRVLSRLRQLGRDSGDFH-IRTVRKVGYRLEILEPETAPEETITAAPPTPA 123 Query: 123 FPFTT---------------------SLNTLDPLILNQELVQIISNKKIDGLYTYP---- 157 ++ +T ++ + I++ + DG P Sbjct: 124 GHRSSINKLWLLGAGAAAALVLAIMLWWSTTQRPLVQKGFSLAIADIRADGPAALPPERL 183 Query: 158 -----MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASN 212 + + + S DY ++G ++ A + + L + ++ I S Sbjct: 184 RSQLTHTLSQMRGLKLVAKTKGSE-GADYILSGYVSGTQASPNIELTLSETRSHTQIWSA 242 Query: 213 HL----------PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAG 262 P + T++++ + Q V P + + + + + Sbjct: 243 RFDQALMSEPTAPERAVAATARYMAVVLGQRVVGPRSTGDPPPVEVATQINEGKRALSQA 302 Query: 263 KKELYDFTPESIYRAMTIFD-RLQNKSDIQTLKTECYCLL----AECHMSLALHGKSELE 317 ++ + M D I+ L A +SE Sbjct: 303 HDARHNRNWPRFDQLMAEVDSHATRALAIEPQSAGALMLKYEVDALPLYPRPGENRSEFA 362 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 Q+AL + + ++LA G + S L ++ + + Sbjct: 363 ERQQRALSFVTRAVTSDPDNPEVLAAAGRDMMERQRWDDSERLLIRSVAIDPNSRDGNLW 422 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 + E S L P + M+ + K+Y + + + Sbjct: 423 YTYYLGLMNRCGEGLKFARLSAALAPDDV-WRQLAVPRLMHCAGRKTDAAKIYARLIDHD 481 Query: 438 SHRVII 443 V + Sbjct: 482 RGNVFV 487 >UniRef50_C1F9V6 Serine/threonine-protein kinase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F9V6_ACIC5 Length = 814 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 49/390 (12%), Positives = 112/390 (28%), Gaps = 22/390 (5%) Query: 81 IFEKIGYDRCIETIYRKGYRFSG-----QVFKTKINEDNTSDYSIAIFPFTTSLNTLDPL 135 I + TI + R +G + + +D +I + PF + Sbjct: 291 IVPGDAAANLLPTIPEREKRATGLLSLLAERFRESQPEQNTDKAILVLPFQNLGSKDVAP 350 Query: 136 ILNQELVQIISNKKIDGLYTYPMAATNFCN---DHISQNSFLSRFKPDYFVTGRINQNNA 192 + L I + ++ + + + + DY +TG ++ + Sbjct: 351 LYGFALADAIGTRLARMSSLIVRPSSALLHLPIAQMDPLAIGHQLIVDYVLTGSFLRSES 410 Query: 193 VNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 L +L+D + + + V +L + I + + ++ + ++ Sbjct: 411 GFDLNWQLLDVQGESVRGGGSISVASFDLISVQTEICNEVFASLQGSGQLRDRTERLTMR 470 Query: 251 KNHYL---SDEMLAGKKELYDF-----TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLA 302 S+ L L F + + RA +F+++ ++ + + L Sbjct: 471 SEALSEGISELYLQASAMLSSFMQRTGSRADLDRAREMFEQV---TEREPEYAPGWSGLG 527 Query: 303 ECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFE 362 HM HG A D I + G+ + + E Sbjct: 528 VTHMQYTRHGFGGHMH-IMAARRAFDKALQIDPGSADANLYRIYMLLARGEKESARHGIE 586 Query: 363 QAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNP 422 S +++ + + +EA +L L P + N Sbjct: 587 DMLSKSARNWNVHVLAGTMLRLDGMYDEALEQFHLALNLNPSGAPMIYNHRARVYQYQNQ 646 Query: 423 LKNNIKLYYKETESESHRVIIDNILKLKQL 452 L K E ++ L +++ Sbjct: 647 LDLAEGELQKGLTLEPRHPLLRTSLAYQRM 676 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/236 (9%), Positives = 56/236 (23%), Gaps = 22/236 (9%) Query: 205 NLFLIASNHLPVDELHNTSQFIID----NILQTVHKPERSVRLAKQDQGYKNHYLSD--E 258 I + D+ D I + + E+ + + Sbjct: 540 GHMHIMAARRAFDKALQIDPGSADANLYRIYMLLARGEKESARHGIEDMLSKSARNWNVH 599 Query: 259 MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE-CYCLLAECHMSLALHGKSELE 317 +LAG D + ++ ++ Y A + + + Sbjct: 600 VLAGTMLRLDGMYDE------ALEQFHLALNLNPSGAPMIYNHRARVY---------QYQ 644 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 A L + + + GQ + + + E T + +Y Sbjct: 645 NQLDLAEGELQKGLTLEPRHPLLRTSLAYQRMRQGQLEEAIAMMEAVLKDDTSLRIIYPT 704 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 A+ + + E I++S + + V + + Sbjct: 705 LAMCYVQIGQRERGATLIEESSMAAAEADSEMAYRLATYFAVDGDESEALHWLRRA 760 >UniRef50_Q2NDU5 Putative adenylate cyclase protein n=1 Tax=Erythrobacter litoralis HTCC2594 RepID=Q2NDU5_ERYLH Length = 654 Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats. Identities = 44/334 (13%), Positives = 89/334 (26%), Gaps = 10/334 (2%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAAT-NF 163 T SIA+ PF T D L I + L A++ F Sbjct: 192 WQFGVFGGTRSNSIAVLPFETIGGGEDQTWFADGLAAEIRARLAQNPLLKVAAKASSNTF 251 Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLI--ASNHLPVDELHN 221 S+ K + + G + + + L D F S +D + Sbjct: 252 RETEADAKEIASKLKVAFLLNGDVRREGDQLRVTAALTDGSTGFTERQLSFDRAIDGVFE 311 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIF 281 I ++ + +Q G N + L G + T ++ R Sbjct: 312 IQSAIAAAVIAELTAQIEGRNTGEQIGGTDNVAAYEAFLRGNELFDAGTDQNTDR--QAL 369 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA--AQKALELLDYVSDITTVDGK 339 + + I + + + + A A E + Sbjct: 370 AKFEEAVAIDPGYAAAHAGKSRAISVIGNLYTAPENRAEVYGSAAEAAREAVRLAPEFAD 429 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + +G + + +E++ A + A + A I++++ Sbjct: 430 GHSALGFAFANRLDMQAARDPYERSYQLGAGDAEILSRYAKFRSRIGDADGASAAIERAV 489 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 L+P + V + Y I + + Sbjct: 490 GLDPLNARVFVFYGNIA-YAAGRYAEAIDHFDEA 522 >UniRef50_A4F1M4 TPR repeat protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F1M4_9RHOB Length = 508 Score = 156 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 55/319 (17%), Positives = 110/319 (34%), Gaps = 17/319 (5%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLDP-------LILNQELVQIISNKKIDGLYTY 156 Q ++ +A+ PF+ L P L +++ ++ KI L Sbjct: 105 QPKHPPAQLSASTTPVVAVMPFSRHLAMHQPQLSSHVMEGLFDDVIDQLA--KIRWLSVI 162 Query: 157 PMAAT-NFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP 215 ++ N + + F +RF +Y ++ + N + L ++LI ++N+ + Sbjct: 163 SRSSVIAGANAGMVPSEFGTRFDANYVISLDLFSNGDASKLGVDLIRSQNMEMTWQKTFL 222 Query: 216 VDEL---HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPE 272 + E + I+ + R + Q + +N S+ + GK L+ + Sbjct: 223 LPESVAQADVRNIAIEIAGNVASQVSRVAQSCSQGRPSENSSFSELLWRGKWHLHRLSKV 282 Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 A IF + E + LA M A ++ E + EL Sbjct: 283 DSQAAQQIFA---DLIAQDPGNPEAHLHLAWTLMWEAWATRASAEKIRDIS-ELGQKAIK 338 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 + DG+ I G++ +S+ +QA +A + RA + EA Sbjct: 339 LDNSDGRAFWIAGVMESWLRNFDLSNRFIDQAIELCPSLALAHMQRASNRIYEGHPAEAL 398 Query: 393 ICIDKSLQLEPRRRKAVVI 411 I+ + +L P Sbjct: 399 KSIETASRLSPMDTHRFFF 417 >UniRef50_Q01Y07 Serine/threonine protein kinase n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01Y07_SOLUE Length = 821 Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats. Identities = 41/377 (10%), Positives = 104/377 (27%), Gaps = 18/377 (4%) Query: 63 NIIVSDESLTRCIYSL-RCIFEKIGYDRCI---ETIYRKGYRFSGQVFKTKINEDNTSDY 118 + S ++ I + R + K DR E + + + + ED Sbjct: 297 DEPASMHAIPANIARIVRRLLRKNPTDRFASAEEVLDAFAATAADREPGSIFEEDAAPLT 356 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSR 176 SIA+ PF + D + + + ++ + P + I + Sbjct: 357 SIAVLPFFFLSDVQDRKAYSLGFADALITTLSSVEEIAVLPTSTIANHVPGIDLSRTCED 416 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH--LPVDELHNTSQFIIDNILQTV 234 Y + G + + + + +L D++ + + + + I +L+++ Sbjct: 417 LGVRYLLQGSVQRQGSQWRVSTQLYDSRKQKIAYAERHDFVRESVFEVQDEIGRRVLESL 476 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 + +D+ + + + G +E Y E++ A + + Sbjct: 477 QMRLKQAAPKSRDRYSSDPEAFEAFMTGLRESYSDRQETLLSAADHLSQ---AVERDPDF 533 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ- 353 + L+ M + A + + I + Sbjct: 534 ALAHATLSYVAMHIHF-EFDPKLAWLDPAEHHCGRALALDPALPEGHLARSFILWSPARN 592 Query: 354 --AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 + E+ + + A + H + EEA ++ + P+ R + Sbjct: 593 FQHAEAIQALEKVLAAQPNNERAHNRIANICVHIGRFEEAYAAQRRARRSNPKTRSNNLE 652 Query: 412 KECVDMYVPNPLKNNIK 428 Sbjct: 653 FL---YLYSGDFARAEA 666 Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats. Identities = 12/155 (7%), Positives = 39/155 (25%), Gaps = 23/155 (14%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL---------- 318 ++P ++ L+ Q + +A + + ++ Sbjct: 587 WSPARNFQHAEAIQALEKVLAAQPNNERAHNRIANICVHIGRFEEAYAAQRRARRSNPKT 646 Query: 319 -------------AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 +A + L + ++G ++ Sbjct: 647 RSNNLEFLYLYSGDFARAEAAAESWVREKPGSTYALWFHAIPALMNGDLDMAERRLAAGL 706 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 D + + +++ + E A C+ K+ + Sbjct: 707 RLYPDEPLMISLQGMLYARRGQTELALDCVRKAQE 741 >UniRef50_A4ANW1 Probable serine/threonine kinase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4ANW1_9FLAO Length = 658 Score = 151 bits (380), Expect = 8e-35, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 94/312 (30%), Gaps = 15/312 (4%) Query: 124 PFTTSLNTLDPLILNQELVQII--SNKKIDGL-YTYPMAAT-NFCNDHISQNSFLSRFKP 179 P + ++ + I KI+ + P + + + Sbjct: 190 PIKNWTGNPELEYISDGMTDAIISRLTKIEAIDKVVPFTSALQYKQTEKTLQEIGKELGV 249 Query: 180 DYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL----PVDELHNTSQFIIDNILQTVH 235 + G + + + ++LI ++ + S DE+ +++ I + + Sbjct: 250 ANVLQGNLQISGDQIKINLQLIHGRSDVHLWSEEYMKEWKSDEIFKIQTEVVEAIAKNMS 309 Query: 236 KPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 LA + + L + + + A+ ++ + +I + Sbjct: 310 ATISENELAAIQKIPTQSKQAYSYFLQAEFQRNKANESTYKNAIALYQKT---IEIDSNF 366 Query: 295 TECYCLLAE-CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM-GLITGLSG 352 E Y A + G + ++A + +LL+ ++ + + + Sbjct: 367 VEAYTSQARVWSFGGLVWGIFDEQIAWENTKKLLEKALELDPDNAAVEEELYSGYYYFDW 426 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIK 412 + +++ + A + +EA +++ L ++P K Sbjct: 427 DFEKVEPYYQR-LLKDPYYDDTPSINADYAIKTGRYQEAIDDMNEFLMIDPSFGVLFCFK 485 Query: 413 ECVDMYVPNPLK 424 ++++ + Sbjct: 486 AEANLFLDKKSE 497 >UniRef50_Q6R8B9 HilA n=1 Tax=Sodalis glossinidius RepID=Q6R8B9_SODGL Length = 293 Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats. Identities = 70/232 (30%), Positives = 110/232 (47%), Gaps = 3/232 (1%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 Y F + L +L ++++ I KELGVL +LLESAG +V K II VW V Sbjct: 33 VQYAFGDFLLN-SSRVLFHKDKRLSISPKELGVLSLLLESAGELVTKAQIIHEVWYGGNV 91 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS-GQVFKTKINEDNTSDYSIAIFPF 125 +ESLTRCIY LR I ++ R I+T+Y KGYRF+ + +A+FPF Sbjct: 92 GEESLTRCIYVLRRILQEEKDRRYIDTVYGKGYRFTLPVTRILPARPGMPARCVLAVFPF 151 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTG 185 + +D + L +VQ ++ GL+ P + T C + L + +PDY++TG Sbjct: 152 RLA-EDIDTVDLQDAIVQQLAPCSPLGLHVLPTSLTMNCRTTDAMLLLLDKIRPDYYLTG 210 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKP 237 +L IEL+ A++ ++ + + L F+ + Sbjct: 211 YELNLGGAPSLRIELMRAEDHLVLLRERVAKEHLAGDGSFLPQLKPMILGAL 262 >UniRef50_C8STQ6 Transcriptional regulator, SARP family n=1 Tax=Mesorhizobium opportunistum WSM2075 RepID=C8STQ6_9RHIZ Length = 614 Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats. Identities = 35/283 (12%), Positives = 90/283 (31%), Gaps = 9/283 (3%) Query: 125 FTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 FT + LVQ I + ++ + ++ + Y Sbjct: 226 FTNLTGKQGDDFFARGLVQDITTALSEVADYVVLSAPPSMEKKGPGEEDKTPGMLRAQYL 285 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTVHKPERS 240 ++G + ++ + I+L+D + + + I +++ V + Sbjct: 286 LSGSVQRSGNGLRVNIQLVDTAGGQHVWAQKFDGNSENALEFQDRIAQSVVLAVILELQL 345 Query: 241 VRLAKQDQGYKNHYL-SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 +D+ + + ++ T +S+ + + + I Sbjct: 346 TNWKVRDKSPPGPPEVRRLVNEALMKYFEMTQDSLLVGIEL---AEKALLIGPDNARAKR 402 Query: 300 LLAE-CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSH 358 L+ M +A E ++AL+L + D I+ SG+ + Sbjct: 403 TLSIVTSMGVAFGALPREEGLIERALQLAEAAVRAVPDDEIARCILSFALESSGRIDEAV 462 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 + A + + S + A++ +I EA +++++L Sbjct: 463 VESRHAISLNPNYPSGHGDIAMLFALRGQISEAVREANEAIRL 505 >UniRef50_Q1QIX2 Lysine decarboxylase transcriptional regulator, CadC n=2 Tax=Rhizobiales RepID=Q1QIX2_NITHX Length = 574 Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats. Identities = 60/522 (11%), Positives = 145/522 (27%), Gaps = 75/522 (14%) Query: 7 FSYHFLEGLTLTEDGILTQ-GNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 F L G E + + K L +LI+ + G V+ K ++++VW N+ Sbjct: 1 MVLCFAGFQLDRPRAELRGPGGEALKLRPKTLCLLILFATNPGRVLSKRELMDAVWPNVH 60 Query: 66 VSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 V D+SL +CI +R + + + GY F +V + D + F Sbjct: 61 VGDDSLFQCIREIRTALGDE-RRQLVRLVSGHGYVFEAEVSVQAASSDTPVPSPVPPFSV 119 Query: 126 TTSLNTLDP----------------LILNQELVQIISNKKIDGLYTYPMAATNFCNDHIS 169 T + D L + I + + GL + Sbjct: 120 TDAPGEPDTPGKPDVTIEPTRLSRLSGLRRPAAMIAALSVVVGLAVATAIQRAPIFEERG 179 Query: 170 QNSFL--------------------------------------SRF------KPDYFVTG 185 + S + D+ ++G Sbjct: 180 PPTIAVMPIKAAGGEAAAMAANVTVRLADGLAKIENIRVVALQSALPAAGTPQADFVLSG 239 Query: 186 RINQNNAVNTLYIELIDAKNLFLIASN----HLPVDELHNTSQFIIDNI-----LQTVHK 236 + Q + + + ++ + + EL + +I ++ Sbjct: 240 ELQQGEGTWDAQVRMTRTADREVVWTAPATITVGDAELSLQQSRLAASIGHPLAVRISTL 299 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 + + + + +G + + + T + A T+ ++ Sbjct: 300 LDAAAKPTESGRGASPGSANVVIEQATASILRTTRDRFATAQTMLEKALAGDPENVDLAV 359 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 L + + + ++ A +A +L+ + +L + + Sbjct: 360 SLAALQLRGIQMVWYSPADSAAAETRARAILERALQVKPSSIPVLEAYCRFLNATNEFVE 419 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE-PRRRKAV-VIKEC 414 S + + Y+ L + E+A ++ + + P+ + ++ Sbjct: 420 SLVACARTLNFDPWNGLALYHIGLAQLQLGRFEDALATFKQADRFDTPQVSRWTWLLGAG 479 Query: 415 VDMYVPNPLKNNIKLYYK--ETESESHRVIIDNILKLKQLTR 454 + + + + S R + +QL R Sbjct: 480 MTYLFMGRSEEALPWLLRSIAITPASGRPYMLLAAAYQQLGR 521 Score = 42.0 bits (97), Expect = 0.049, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 32/113 (28%), Gaps = 7/113 (6%) Query: 260 LAGKKELYDFTPE-SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL 318 G + + + R + T + + L M+ G+SE Sbjct: 433 WNGLALYHIGLAQLQLGRFEDALATFKQADRFDTPQVSRWTWLLGAGMTYLFMGRSE--- 489 Query: 319 AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDI 371 +AL L IT G+ ++ G+ + ++A Sbjct: 490 ---EALPWLLRSIAITPASGRPYMLLAAAYQQLGRPDDAKAAMDKALALRPGS 539 >UniRef50_UPI0001909FC7 hypothetical protein RetlC8_25020 n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI0001909FC7 Length = 473 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 40/363 (11%), Positives = 101/363 (27%), Gaps = 21/363 (5%) Query: 101 FSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYP- 157 FS + D + + PF + + L + K + Sbjct: 37 FSPLSRPSNSPADRPDFPQVLVEPFEDISEAGASGGIARGLTDEVIGRLAKFREIVVISN 96 Query: 158 -MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV 216 AA+ P + + GR+ ++ L ++ + +I +N Sbjct: 97 LPAASAGQPLSKDLQE------PRFALQGRVRVEDSRLRLTARFVNRHDGSVIWANSYDK 150 Query: 217 D----ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPE 272 D ++ + ++ + P + + A + Y + + Sbjct: 151 DLRIQDVLQVEADLAQDVATALASPYGIIFRNDTAKISPAAPDDWGDYACAQSYYRYRVD 210 Query: 273 SIYRAMTI-FDRLQNKSDIQTLKTECYCLLAECHMS----LALHGKSELELAAQKALELL 327 + LQ + + + LL+ ++ K+ + + + ALE Sbjct: 211 LNPKGRDAVRTCLQQATKHLPGNSTYWALLSMTYLDALRFQYSLDKAPAQQSLKSALETA 270 Query: 328 DYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEK 387 D+ + + L + L SG + A + + L + K Sbjct: 271 RRAVDLDPQNARALQALMLANFFSGDVDAALSAGAAAYEINPNDTELAGEYGFRLALSGK 330 Query: 388 IEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKET--ESESHRVIIDN 445 + + ++ P + + + Y+ + + H +++ Sbjct: 331 WDTGCELMSGAINKNPGPKGYFEVGLAMCAYMRGDYRAAELWVRMADLRYNPMHHLVLLA 390 Query: 446 ILK 448 IL Sbjct: 391 ILG 393 >UniRef50_UPI0001902632 hypothetical protein Retl8_03555 n=2 Tax=Rhizobium etli RepID=UPI0001902632 Length = 271 Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats. Identities = 45/228 (19%), Positives = 78/228 (34%), Gaps = 8/228 (3%) Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFT--PESIYRAMTIFDRLQNK 287 I + V + + K+ D + G+ + FT PE+I A + +R Sbjct: 1 IGKIVEALVGQLVELPPRKRPKSLEAYDVCVRGRSLISSFTSFPEAIREAQILLER---A 57 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 I+ +E LA H L H + +ALEL + D ++G + Sbjct: 58 ILIEPEYSEASRWLAFVHWQLWAHSIEPSDENRSRALELARRAVQLDGSDAAARWVLGYL 117 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 S F+ A + + + + + EA I ++L+L PR Sbjct: 118 LAYEKSWPASDTEFKAAFRLEPNNTDALVMSSELAVYAGQPLEAIDTISRALRLNPRPPG 177 Query: 408 AVVIKECVDMYVPNPLKNNIK-LYYKETESESHRVIIDNILKLKQLTR 454 + + Y +K L + T + R I+ L QL R Sbjct: 178 WYYWELGLAYYAAGRYVEAVKTLRMEATYRSASRRILAASLA--QLGR 223 >UniRef50_C1F5C9 Putative transcriptional regulatory protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5C9_ACIC5 Length = 692 Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats. Identities = 55/347 (15%), Positives = 108/347 (31%), Gaps = 8/347 (2%) Query: 75 IYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDP 134 I L + G + + + ++ ++ I PF S Sbjct: 185 ISGLPRALGRRGVFYAAGVLLLLAGMLAMAPRLKRRPAAAPAEITLGIAPFQASGPGAAS 244 Query: 135 LILNQELVQIISNKKIDGLYTYPMAATNFCN-DHISQNSFLSRFKPDYFVTGRINQNNAV 193 L + L + ++ L + + N D + + + D + G N Sbjct: 245 LAQSFRLDLTDTLSQLPHLDVRASNSLDLLNLDRSTFRAQATHLGLDVLILGSFTLQNNE 304 Query: 194 NTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQD-QGY 250 + +EL+ +L IAS + V EL + I D + +++ S L G Sbjct: 305 CHVQLELVRGNDLSHIASFNRTVSRYELADLRTMIQDEVYRSLKLSPVSGGLPTTPIDGT 364 Query: 251 KNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLAL 310 N D L + T S+ A+ + Y A ++ L Sbjct: 365 SNPLAYDAYLRAQYHFSQLTGNSLVLAVA---EYNEAIADDPNFVDAYAGQARAYIFLVQ 421 Query: 311 HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS-GQAKVSHILFEQAKIHST 369 + + A + + + + A +G I L K QA + Sbjct: 422 NDRIGESEGYTLARQAARHALALDAHTAEAHADLGFIYFLQSWNLKAGERELRQAISANP 481 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 D + AL++ + EA I+++L ++P A + + Sbjct: 482 DDPFYHQGLALIYSDEGRFHEAEAQINQALAVDPYWVSAYITDIHIA 528 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 56/452 (12%), Positives = 128/452 (28%), Gaps = 57/452 (12%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 M+ + + F L E+ LT+ + I ++ L +L +L+ S+G +V ++ I +++ Sbjct: 1 MEPQEPTVFSFAAYLYDAENRRLTRNQVPIRINRQMLDLLDLLVRSSGRLVTREQIQKTL 60 Query: 61 WKNIIV--SDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSD 117 W + S++ +T + LR I R IE++ R GYR + ++ Sbjct: 61 WPGQFLDNSEKRITNAVARLRHILGDNSSRPRYIESVPRTGYRLIAPIRVVELARGARPA 120 Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLS 175 + ++ + + L +++ + + G + + + S Sbjct: 121 PA------ALLPPAVETAVPAEGLPEVLPDAPSALSGTTATADSPSLSEDREAQTRSAGL 174 Query: 176 RFKPDYF---VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQ 232 P ++G Y + ++A I I Sbjct: 175 LQPPGSASAPISGLPRALGRRGVFYAAGVLLLLAGMLAMAPRLKRRPAAAPAEITLGIAP 234 Query: 233 TVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA--------------- 277 + LA+ + LS + ++ R+ Sbjct: 235 FQASGPGAASLAQSFRLDLTDTLSQLPHLDVRASNSLDLLNLDRSTFRAQATHLGLDVLI 294 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT-- 335 + F N+ +Q L + + EL + + ++ Sbjct: 295 LGSFTLQNNECHVQLELVRGNDLSHIASFNRTVSRY-ELADLRTMIQDEVYRSLKLSPVS 353 Query: 336 -----------VDGKILAIMGLITGLSGQAKV-----SHILFEQAKIHSTDIASLYYYRA 379 + Q + + +A + Y +A Sbjct: 354 GGLPTTPIDGTSNPLAYDAYLRAQYHFSQLTGNSLVLAVAEYNEAIADDPNFVDAYAGQA 413 Query: 380 LVHFHN------EKIEE---ARICIDKSLQLE 402 + + E AR +L L+ Sbjct: 414 RAYIFLVQNDRIGESEGYTLARQAARHALALD 445 >UniRef50_A9GH81 Protein kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GH81_SORC5 Length = 856 Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats. Identities = 40/349 (11%), Positives = 92/349 (26%), Gaps = 37/349 (10%) Query: 121 AIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA-TNFCNDHISQNSFLSRF 177 A+ PF D L + ++ GL P AA + D Sbjct: 374 AVLPFRNV-GAPDDEYLADGFTEDLTDTLSMTAGLKVRPRAAVSRVRLDGRDPRDVGREL 432 Query: 178 KPDYFVTGRINQNNAV--------------------------NTLYIELIDAKNLFLIAS 211 V G I + + + +I ++ F + + Sbjct: 433 GVQVVVEGSIRRTGGGGYAPDGPRSQPPAPYSRPASRTPPGGVRVTVRVIGVEDGFQLWA 492 Query: 212 NHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTP 271 + D+ + +++ + + D L + ++ Sbjct: 493 KRFDSSPEALL--TVSDDAAGAIAAALTVDAASRERESPSDPRAIDLYLRARHQMRRLWY 550 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 A+ +F+ + S Y + + + + E KA + + Sbjct: 551 GDAAPAVALFEEALSFSPNDPSILSGYAIA----FARLMGARGEGAAQFAKAQQAAERAI 606 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + G+ + + +G + +A + +A + + ++EA Sbjct: 607 ALAPALGEPWVALATVRFSAGDPVGAVPALRKALQCAPSLAKAHELLGRILLEAGLVDEA 666 Query: 392 RICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 +D +L L+P + + L E S R Sbjct: 667 MFRLDTALALDPSEP-FPRWELARGRALLGDWPAAGVLLDLPAEDPSSR 714 >UniRef50_Q1IIA4 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIA4_ACIBL Length = 822 Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats. Identities = 37/337 (10%), Positives = 105/337 (31%), Gaps = 16/337 (4%) Query: 104 QVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAAT 161 + + + + SIA+ PF ++ + I + L P + Sbjct: 337 KHDSAQTSSAKPTVESIAVLPFRDLASSAGDSW-AIGITDAIISRLTSLKNLAVRPTTSV 395 Query: 162 N-FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--E 218 + + + D + G + V + ++LID + S + + Sbjct: 396 MKYAKETPEATEAAKALQVDSILEGTYQRTPDVTRVTVQLIDGRTGTTKWSQRYDLRSAD 455 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQG-YKNHYLSDEMLAGKKELYDFTP----ES 273 + + +++ + Q N ++ L G+ ++ +S Sbjct: 456 ILTFEDQVAAKVVEGLQIEISPKEQQNIQQQLTANVDAYNDYLQGRAYYNEYLETSQLDS 515 Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + ++ + + + + Y LA+ + A + + + Q+ E I Sbjct: 516 LEKSQAVLKQ---AIALDPNFADAYAALAQAYQFQAANFLHDAKANLQRGREASLQSLKI 572 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + L + G+ +A + + S + A +++ ++A Sbjct: 573 KPDFAEGLVALAGGYAEEGRLAEGIRASRRAVELAPNSPSAWQILAYNYYYAGLNDQAAE 632 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYV--PNPLKNNIK 428 + +QL+P + + + +Y + ++ Sbjct: 633 GYARLVQLDPGPPQPHWMHARMLLYSGKAEAAEQAMR 669 Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats. Identities = 23/210 (10%), Positives = 56/210 (26%), Gaps = 58/210 (27%) Query: 228 DNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 + + + R+V LA + AG +A + RL Sbjct: 591 GRLAEGIRASRRAVELAPNSPSAWQILAYNYYYAGL----------NDQAAEGYARL--- 637 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 + + + H + L+ A+ A + + K+L G Sbjct: 638 VQLDPGPPQPH----WMHARMLLYSGK-----AEAAEQAMRDTVARFPNQFKVLGYYGSF 688 Query: 348 TGLSGQAKVSHILFEQAKIHSTD------------------------------------I 371 G+ + ++ S + Sbjct: 689 LYYEGKLDEAQGYLDRGVQLSQNVDDDSPRMMAGFLYASRKQRDKIAPRLFHYTPDQVID 748 Query: 372 ASLYYYRALVHFHNEKIEEARICIDKSLQL 401 A ++ A ++ + ++A + + +S++L Sbjct: 749 ADAAHWIAGIYALLGERDKAILWLKRSIEL 778 >UniRef50_B6A473 Transcriptional regulator, SARP family n=4 Tax=Rhizobium leguminosarum RepID=B6A473_RHILW Length = 650 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 41/364 (11%), Positives = 98/364 (26%), Gaps = 12/364 (3%) Query: 94 IYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQI--ISNKKID 151 I + + + + I I P + + + L++ I + Sbjct: 240 IPAAQAAAPERPPASGMFANLLGQPRIIILPPESIFTDPLMERVGRALLEDVTIGLSQQR 299 Query: 152 GLYTYPM-AATNFCNDHISQNSF---LSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLF 207 G + + I DY V I + L Sbjct: 300 GFKVIAAHTSLEILSRSIDPARAVPGPLDLSFDYAVYVTIQGRDEDVFATCRLTRTTTSE 359 Query: 208 LIASNHLPV--DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKE 265 +I + LP+ ++ + + I+ ++ LA G L GK+ Sbjct: 360 VIWALELPLVMQKISESFAHLTRRIVSSLADTIERHELAM-PIGDAPASAYRLYLEGKRL 418 Query: 266 LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE 325 + + + +A F N+ + + + ++ L + +A Sbjct: 419 IAQTDLQHLRQARKWFKSSLNRYE---HFSAAHAGVSRALGMEWLIRGMRDKELLDEANG 475 Query: 326 LLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 G+ +G + + S F+QA+ + + A + A H+ Sbjct: 476 AARQAQQSDPNSGRAYRELGFVALYRRRFDESLEYFQQAQDLNPNDADILADFADALSHD 535 Query: 386 EKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDN 445 + A + +L P ++ + I ++ ++ Sbjct: 536 GDFDRALELSRAAFKLNPLPPDYYYWNLGGIHFMREEYEKAIDALEPVKTKQATARLLAA 595 Query: 446 ILKL 449 + Sbjct: 596 SHAM 599 >UniRef50_A8I3P3 Putative uncharacterized protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8I3P3_AZOC5 Length = 592 Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats. Identities = 53/360 (14%), Positives = 113/360 (31%), Gaps = 29/360 (8%) Query: 68 DESLTRCIYSLRCIF-----EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDY---- 118 D ++ LR E DR + Y ++ Sbjct: 71 DSTVRVEARRLRRKLAAYYAEPSPQDRVRIDLPTGTYVPLFTWLAPTESQALPEADGGLF 130 Query: 119 ------SIAIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMA-ATNFCNDHIS 169 ++ I P T +I EL + + +K +G A + N Sbjct: 131 RPGTGAAVLILPLTPLSGGAQDVIFADELTDELIFALEKAEGYRVASRQIAFRYRNTGAP 190 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV-----DELHNTSQ 224 + D + G + + AV + +EL D + F + S+ ++ + Sbjct: 191 IAAVAQELSADGVIHGTVRRAGAVLRVTVELAD-PSGFAVWSDRFDGHVETPEDGLILQE 249 Query: 225 FIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRL 284 I IL + ++R + S ++ ++ L TP+++ +A+ +F ++ Sbjct: 250 RIAATILSRLRFDSSAMRSGAAGPRPQAIKASAQVYRARQLLDQQTPQALRQALGLFRQV 309 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 + + Y +A+CH+ L G + A+++A + I + Sbjct: 310 SDTTS---DYARGYSGIADCHLDLFRLGLIDHATASREAAAAVRKALSIDGKSVEAHTAR 366 Query: 345 GLI-TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + L V+ F+ A + A +A ++ +EP Sbjct: 367 ATVAAWLDWDRAVAEEAFKTAMALGEN-ARCVRLYGAFRAFCGHHGDAIRLFARARAMEP 425 >UniRef50_Q0FKG0 Putative uncharacterized protein n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FKG0_9RHOB Length = 597 Score = 139 bits (349), Expect = 3e-31, Method: Composition-based stats. Identities = 39/324 (12%), Positives = 85/324 (26%), Gaps = 18/324 (5%) Query: 125 FTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 F +L Q L ++ + L + +A +SR + ++ Sbjct: 203 FELGSVDELATLLAQGLTHAVAAALIRFPDLRIFRASAQGSPGAGAPSIEAISR-QVEFL 261 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHL----PVDELHNTSQFIIDNILQTVHKPE 238 V G + + + ELI + ++ S L I I V + Sbjct: 262 VAGSVWREADDLFVRAELIRQADQQILWSERYAEGAEGRSLTEIEDEISSRIASVVGQQY 321 Query: 239 RSVRLAKQD-----QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 +D + + + + + E A + Sbjct: 322 GLAMQDHRDGLKVARSDPSVQGFACVARAQIYRRTYRTEEYQAARDCLEET---VRKDPD 378 Query: 294 KTECYCLLAECHMSLALHGKSEL---ELAAQKALELLDYVSDITTVDGKILAIMGLITGL 350 + +LA G E A E D+ D L M I Sbjct: 379 YVRAWAMLAYLRNDATRFGHDTARTREAGFDHAREAALRALDLDPDDTDALQAMSHIEQY 438 Query: 351 SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVV 410 SG S +A + + + + + + + + A + ++++L Sbjct: 439 SGDMDRSIDYARRAVEVNPNDPAAVANLGIRYHIHGRYDLAVPLMQQAIELSVSPPPFYF 498 Query: 411 IKECVDMYVPNPLKNNIKLYYKET 434 D + + + + + Sbjct: 499 HVLAADHLIKQEWDDMLSAAQRAS 522 >UniRef50_A4XFE5 Transcriptional regulator, SARP family n=1 Tax=Novosphingobium aromaticivorans DSM 12444 RepID=A4XFE5_NOVAD Length = 584 Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats. Identities = 41/345 (11%), Positives = 110/345 (31%), Gaps = 17/345 (4%) Query: 122 IFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATN-FCNDHISQNSFLSRFKPD 180 + T +P + + + S ++ L + + I ++ Sbjct: 192 PVRGLFTSQTEEPFLQAVTRLLVSSVTRLRWLPVLTASVADDSIYGAIGPEDAKAQANAR 251 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 Y + + ++ + L L++ ++ S+ PV + I + + V+ Sbjct: 252 YVLESELVRSGSQAILSFTLLEMPLRTVLWSDSEPVAPTFDIH-EIEQVLFRAVNLLSAR 310 Query: 241 VRLAKQDQGYKNHYL----SDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 +Q + +D + + L FT E + A + D+ ++ E Sbjct: 311 FDRCEQHRVMARKPDPANLADAVWRIRYHLQKFTREDMATAAQLLDQ---AFELDPHHAE 367 Query: 297 CYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 L A + + +E + L D + MG++ + Sbjct: 368 LAMLRANHVIWDHWLRRVPVEKC-DGLVPLARAAVRADPADARGPLFMGVLETWRRNTEH 426 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI--KEC 414 + E++ + + + + ++ N K E + +++SL L P I + Sbjct: 427 AIRYLERSCELNPCFPAAFSHLGAAYYLNGKPERSIEPLERSLYLSPMDPFRFFILGELG 486 Query: 415 VDMYVPNPLKNNIKLYYK-----ETESESHRVIIDNILKLKQLTR 454 + +++ + +H + + ++ L ++ R Sbjct: 487 TARLLLGEHAEALRIAREVQLTHPNYVLAHILETNALVGLGEMER 531 Score = 45.5 bits (106), Expect = 0.005, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 45/156 (28%), Gaps = 19/156 (12%) Query: 248 QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS 307 + + + T A+ +R ++ + L + Sbjct: 402 RADPADARGPLFMGVLETWRRNTEH----AIRYLERSC---ELNPCFPAAFSHLGAAYYL 454 Query: 308 LALHGKSELELAAQKALELLDYVSDITTVDGK---ILAIMGLITGLSGQAKVSHILFEQA 364 ++++E L+ ++ +D IL +G L G+ + + + Sbjct: 455 NGKP---------ERSIEPLERSLYLSPMDPFRFFILGELGTARLLLGEHAEALRIAREV 505 Query: 365 KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 ++ + + ++E AR + L Sbjct: 506 QLTHPNYVLAHILETNALVGLGEMERARAAWSRLLA 541 >UniRef50_B9JD99 Putative uncharacterized protein n=1 Tax=Agrobacterium radiobacter K84 RepID=B9JD99_AGRRK Length = 649 Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats. Identities = 48/320 (15%), Positives = 98/320 (30%), Gaps = 8/320 (2%) Query: 123 FPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPD 180 P + N + L+ L++ I S + + + +++ L R + Sbjct: 273 PPVNLARNHQAAIFLSAALLEDITVSLCVLKTVTMVAHYTAEKIALDLDRSATLERHDIN 332 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPE 238 Y + R++ + L+ +LI A N +I + ++ +L + I I+ V Sbjct: 333 YVLDTRLSFDGNAYWLFTQLIYAGNDEVIWAERFSMEARDLPRQHREITQRIVSAVANSI 392 Query: 239 RSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + D +N L G++ L I RA F Q + Sbjct: 393 ERNEFTR-DYFERNPEAYHHYLLGQRHLKHLGLPDIRRARKEF---QIALKENPYFSPAL 448 Query: 299 CLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSH 358 +A + L ++A E G+ G S Sbjct: 449 SGIARTYHLEWLVTAQGDARLLKRAEEEAGRAIATGQDIVGGYHQFGVAKLYQGAFDESI 508 Query: 359 ILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMY 418 F+ A++ S A + A H + EA ++++++L P + Y Sbjct: 509 EAFKLAEVISPHYADVIADYADTLQHASQPREALEKVERAIKLNPLSPDLYLWTAAGANY 568 Query: 419 VPNPLKNNIKLYYKETESES 438 + + + Sbjct: 569 SLECYEEANAYIARMADPSQ 588 >UniRef50_A3SFP7 TPR repeat-containing protein n=2 Tax=Sulfitobacter RepID=A3SFP7_9RHOB Length = 543 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 59/447 (13%), Positives = 122/447 (27%), Gaps = 62/447 (13%) Query: 24 TQGNEQVYIPQKELG-VLIVLLESAGHVVLKDMIIESVWK--NIIVSDESLTRCIYSLRC 80 +V I K+ VL +L + G + + +W SL + + +LR Sbjct: 13 RTDGSRVTITSKKARAVLAMLAVAPGGRRERRWLQYKLWSERGEREGAASLRQTLSALRR 72 Query: 81 IFEKIG----YDRCIET-----IYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNT 131 +G DR T + S + + I F L Sbjct: 73 ALAPMGDVLEADRTTVTLSLSEVAVDVLELSSVAQRLPGQAEFLEGLDIRDPEFDNWLRD 132 Query: 132 LDPLI-----------------LNQEL-------------------VQIISNKKIDGLYT 155 L Q ++ + +D L Sbjct: 133 QRAFWSRQLETSQSGPDPSEVDFAPPLDVPCVTLMPFASAEPLTPQAQELAEQVLDQLAR 192 Query: 156 YPMAATNFC--NDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH 213 + + + S +Y VTG++ Q+ L +EL + Sbjct: 193 HRWISFMDWAVHSGRSAAGAARPATANYVVTGQLRQSGGRLVLMVELTHLTTGQSVKRAQ 252 Query: 214 L------PVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSD--EMLAGKKE 265 D + D ++ ++ + + + SD + G+ Sbjct: 253 FTAPLADAADIGAGFAAVARDMAIEVAGNFSCALAQSYEQRSQSRPAQSDEALVWQGRWH 312 Query: 266 LYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALE 325 + TPE +A IF+ + E + LA + +++ + A Sbjct: 313 INRLTPEDFEKAQAIFE---DIIARNPGHVEAHVYLALTTLWRVWTCRADP-RDIKLARR 368 Query: 326 LLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 + DG+ I G G + ++A +A + R ++ Sbjct: 369 QAQKAIKLDVSDGRGYWIAGCAECWLGNKTAAVHYTDEAIRLCPSLAFAHDQRGTNLAYD 428 Query: 386 EKIEEARICIDKSLQLEPRRRKAVVIK 412 A ++ +++L P + + Sbjct: 429 GNPLAALEALEHAIRLSPHHPQRFCFE 455 >UniRef50_B1KKU4 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KKU4_SHEWM Length = 711 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/226 (19%), Positives = 82/226 (36%), Gaps = 5/226 (2%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 + Y + LTQ + +P K L VL L ++ VV +D ++ VW N + Sbjct: 2 EEQYWVGDFFVDLSRNQLTQKQQSQTLPPKALAVLTCLAKNKASVVSQDELLSHVWPNSV 61 Query: 66 VSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 V+ +L RCI LR G R I+T ++GY V + +N + S + Sbjct: 62 VAPNTLQRCIAQLRKALGDDGKVQRYIKTHAKQGYSLEVDVHWQQPEPNNANKDSSPLPT 121 Query: 125 FTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKP----D 180 P ++ + ++IS + + + F S + +P D Sbjct: 122 TLAVQVEDSPHQPSKTVSRLISAVIALLIIVFGVIGYQFFPLTASTPLVVKSMQPLTSTD 181 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFI 226 I + +++ + + + +L E +Q + Sbjct: 182 NRELASIYSPDGEYVIFMRYPEVLCTSHLWAKNLATQEEFQLTQDL 227 >UniRef50_Q2JZX4 Trifolitoxin synthesis protein n=9 Tax=Rhizobium etli RepID=Q2JZX4_RHIEC Length = 612 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 38/334 (11%), Positives = 94/334 (28%), Gaps = 12/334 (3%) Query: 124 PFTTSLNTLDPLILNQELVQI--ISNKKIDGLYTYPM-AATNFCNDHISQNSFLSR---F 177 P + + + L++ I + G + + + + R Sbjct: 232 PPESIFTDPLMERVGRALLEDVTIGLSQQRGFRVIAAHTSLEILSRSVDPARAVPRPLDL 291 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTVH 235 DY V I + L +I + LP+ ++ + + I+ ++ Sbjct: 292 SFDYAVYVTIQGRDEDVYATCRLTRTTTSEVIWALELPLVMQKISESFAHLTRRIVSSLA 351 Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 LA G L GK+ + + + +A F N+ + + Sbjct: 352 DTVERHELAM-PIGDAPPSAYRLYLEGKRLIAQTDLQHLRQARKWFKSSLNRYE---NFS 407 Query: 296 ECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAK 355 + ++ L + +A G+ +G + + Sbjct: 408 AAHAGVSRALGMEWLIRGMQDTELLDEANGAARQAQQSDPNSGRAYRELGFVALYRRRFD 467 Query: 356 VSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 S F+QA+ + + A + A H ++A + + +L P Sbjct: 468 ESLDYFQQAQDLNPNDADILADYADALCHYGDFDKALDLNNAAFKLNPLPPDYYYWNRGG 527 Query: 416 DMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 + + I+ ++ ++ + Sbjct: 528 IHFDRGEYQQAIEALEPVKSKQATARLLAAAHAM 561 >UniRef50_B6A4C8 Transcriptional regulator, SARP family n=4 Tax=Rhizobium RepID=B6A4C8_RHILW Length = 649 Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats. Identities = 43/330 (13%), Positives = 101/330 (30%), Gaps = 11/330 (3%) Query: 136 ILNQELVQI--ISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAV 193 +L++ L++ I ++ + + + + R Y + R+ Sbjct: 286 MLSEALIEDVTIGLCALNTVSVVAPHTAARIAHNADKAQLILRHSISYVLDTRLTNRAGS 345 Query: 194 NTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYK 251 L+++LI A + +I + ++ EL + + I I + + R + D Sbjct: 346 PALFVQLIYAGSDEVIWAERFSLEKYELISHRRDIARQIAKELAGQVRRHETMR-DAFEG 404 Query: 252 NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALH 311 N L G +++ + R+ F + L+ + L Sbjct: 405 NSAAYHSYLLGLRDIKRLALPDVRRSRKAF---REALQHSAHFAPALSGLSRTFLVEWLL 461 Query: 312 GKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDI 371 A + + +G+ G+ S + + A+ S Sbjct: 462 TARGDSELLGLAEDYANRAIVADPSFAAGFRELGVAKLYLGELDESVVALKLAEELSPHY 521 Query: 372 ASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNI-KLY 430 A A H + +A I++++ L P + + + ++ Sbjct: 522 ADGIASYADTLVHASRPADALAKIERAISLNPLSPTDYLWTAAGANFALGHYAEALEQIS 581 Query: 431 YKETESESHRVIIDNILKLKQL--TRICMR 458 + + + R+ L + RI MR Sbjct: 582 IMDDRTPADRLSAACWAMLGDMKNARIYMR 611 >UniRef50_Q0AQA4 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Maricaulis maris MCS10 RepID=Q0AQA4_MARMM Length = 412 Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats. Identities = 49/409 (11%), Positives = 107/409 (26%), Gaps = 31/409 (7%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 + +T + K + +L +L E+ G VV + I +W + V++ Sbjct: 7 FLLGAWRVEPSSCEVTGPEGVRELEPKVMDLLCLLAEAKGEVVSRATISARIWPGVTVNE 66 Query: 69 ESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQ----VFKTKINEDNTSDYSIAIF 123 +++ RC++ LR R + T+ ++GYR + ++ + Sbjct: 67 DAMGRCVWKLRRALGDPSRSPRYVGTVPKRGYRLLEPVSAIPVSPAMIARLVPNWIWGVC 126 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 L L ++ V S + L A + N R Sbjct: 127 GALLLLAAFPAYWLARDQVAANSAPEDRALQLVDRAEGFYYQFEYDANEAAMRL-----Y 181 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRL 243 + + L + +I + + I + + + E + R Sbjct: 182 EAALELESDNARALAGLANTITQRVI-RGTVDEWPAELGTSRIGNAVANRIGDQEDAAR- 239 Query: 244 AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI---FDRLQNKSDIQTLKTECYCL 300 + D+ + A Y S+ + + I E + Sbjct: 240 -RLDRAESLARRAIAADADYPLGYRALGLSLSAQGALDAAVEAYNQALTIDPDAWEAWIN 298 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA---------IMGLITGLS 351 L++ H + A LE D +L ++ Sbjct: 299 LSDIHSIRG------EDDLALTYLERAYDAMGRVYDDQTVLVRPWYSPMGLMIARDHAAR 352 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + + + A + N A + + Sbjct: 353 SDPVTAEFWYRRVLYWDPYNREALSELAELLRANGDAPSAEALCAEGIA 401 Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 46/163 (28%), Gaps = 13/163 (7%) Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 + + Y F ++ AM +++ ++++ LA Sbjct: 146 AANSAPEDRALQLVDRAEGFYYQFEYDANEAAMRLYE---AALELESDNARALAGLANTI 202 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + G + A + + I G + + + L +A Sbjct: 203 TQRVIRGTVDEWPAELGTSRI---------GNAVANRI-GDQEDAARRLDRAESLARRAI 252 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA 408 D Y L ++ A +++L ++P +A Sbjct: 253 AADADYPLGYRALGLSLSAQGALDAAVEAYNQALTIDPDAWEA 295 >UniRef50_C6ATW4 Transcriptional regulator, SARP family n=7 Tax=Rhizobium RepID=C6ATW4_RHILS Length = 615 Score = 134 bits (336), Expect = 9e-30, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 90/316 (28%), Gaps = 10/316 (3%) Query: 137 LNQELVQI--ISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVN 194 L L++ I + + + + ++R Y + R+++ Sbjct: 257 LANALIEDVTIELCALRNISIVAPHTAGQIRRDSEKAAVVARHSIAYLLDTRLSEEG--- 313 Query: 195 TLYIELIDAKNLFLIASNHLPVD-ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNH 253 L+ +L+ +I +N + ++ + +I L E + ++ + N Sbjct: 314 -LFAQLVYFPTDEIIWANRFTMTPDILPRQRRLIAQQLTMSVARELAENEEERLRFEANP 372 Query: 254 YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGK 313 L G + T I RA F + + + + LA S L Sbjct: 373 EAYHAYLVGSSLMSKLTLPHIRRARKAFKQ---SLSHKADFSPSFTGLARTFTSEWLVTA 429 Query: 314 SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 A + + +G+ G S + A+ S A Sbjct: 430 QGNNELLHLAEQNALRAIERDPASAAGHRELGVTKLYLGDVDASVAALDLAEQLSPHFAD 489 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 + Y A H + +A I +++ L P A + + + I Sbjct: 490 VIYSHADTLVHASRPGDALAKIRRAISLNPIAPDAYLWCAAGASFFLEQYEEAIAYVEAM 549 Query: 434 TESESHRVIIDNILKL 449 + I + Sbjct: 550 KDKAPAHRIAAASCAM 565 >UniRef50_A4BGW4 Putative regulatory protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BGW4_9GAMM Length = 508 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 60/442 (13%), Positives = 141/442 (31%), Gaps = 24/442 (5%) Query: 14 GLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN--IIVSDESL 71 E + V + ++E + VL ++ ++ +++++ ++ +S SL Sbjct: 3 LELSLESRSADINGKTVRLTRRETRLCEVLAAHPNQLIGRERLLDTLSQDGLEDLSSRSL 62 Query: 72 TRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLN 130 + LR G + IET+Y +GYR+ D T + Sbjct: 63 DNSVSRLRKKLGDSGKRPQVIETLYGEGYRWVYDTAVNVEQPDKN----------TLVVL 112 Query: 131 TLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQN 190 L L V + + + + + T S + Y++ Sbjct: 113 DLSAPNLLDRPVVDRALQTLQQQLSSQLECTVRLGHMASNEIDVGADPTHYYLEALPLSG 172 Query: 191 NAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGY 250 + + + ++ V EL + + ++D + + + + L Q +G Sbjct: 173 PETMQMVLNIRRHQSALSENLGQFSVTELTDQASPVVDAVHSFMVRCD----LLMQTEGL 228 Query: 251 KNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLAL 310 + L + + + P+ L N Q L+A + L Sbjct: 229 TANPLDVALFNVTSKYENDGPQH----RVTQQYLNNLMHEQPDDPHAKVLMALNMRNRIL 284 Query: 311 HGK-SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHST 369 G + + A + L+ + LA + G L E+A + Sbjct: 285 MGYVTHYQKALGEMQSLIQTALPYLDNEALYLAASAEVLYQCGDKTHGRQLAEKAHGQMS 344 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR--RRKAVVIKECVDMYVPNPLKNNI 427 A+ +H + ++A C D+++ + P +++ ++ N + + Sbjct: 345 HPAATLKTVGKIHAFEGRFDQALDCYDQAIAMIPNGGTYHYMLLTLKAILFKANREHDAL 404 Query: 428 KLYYKETESESHRVIIDNILKL 449 ++ + ++ IL L Sbjct: 405 SEAFQAMKMLEPKLSKRAILSL 426 >UniRef50_A6G2I7 Serine/threonine protein kinase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G2I7_9DELT Length = 875 Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats. Identities = 30/308 (9%), Positives = 84/308 (27%), Gaps = 31/308 (10%) Query: 119 SIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCN--DHISQNSFL 174 +A+ PF D L +++ ++ + GL AT D + Sbjct: 390 PLAVLPFR-YRGPADSAYLVDAMLEELTDLLSQTRGLEVSSAGATRRFGELDERDPRTLG 448 Query: 175 SRFKPDYFVTGRINQNNA--------------VNTLYIELIDAKNLFLIASNHLPVD--E 218 V G + + + ++D + F + S+ + + Sbjct: 449 RELGVALIVDGTVQLVGSLDAQRSQGPGDRGPRLRVSARVLDVEGGFQLWSDRFDGEFAD 508 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAM 278 + + I + + + D + + + + + A+ Sbjct: 509 VFEIQDKLCKRIAEALRVELEII----GDDVPDDLEAIESYMRARSAKLLWRLRGPDGAI 564 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ---KALELLDYVSDITT 335 ++ + LA M + +++ + E + + Sbjct: 565 ALYKQT---LARAPRFKAALAGLAFASMRGWFLPEGDVDADYDWPRECAEAVAMAMEWAP 621 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + + + + + +A + A + Y + K + Sbjct: 622 DHAETRVAAAALAIQNADLRGGALHLREALRIAPTCALAHEYLGRLLIEGPKPARGVAHL 681 Query: 396 DKSLQLEP 403 +++LQL+P Sbjct: 682 EQALQLDP 689 >UniRef50_A3UJQ2 Transcriptional regulator n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UJQ2_9RHOB Length = 416 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 55/420 (13%), Positives = 119/420 (28%), Gaps = 54/420 (12%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 + + +T V + + + +L+ L ++ G V KD I ++W Sbjct: 1 MSADTPFLMGPVRVEPAMNRITSEEGPVELEPQVMDLLVYLAQAKGEVRSKDDIARALWP 60 Query: 63 NIIVSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIA 121 + V+D++L+R I+ LR R ++T+ R+GYR V + ++ Sbjct: 61 DASVNDDALSRTIWKLRQALGDDAKSPRFVQTVSRRGYRLIMPVATLGAGMEAQTETGPR 120 Query: 122 IFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 + +++ + + + I+ + Sbjct: 121 MSATVL-----------------LASAAVLVVLLVGASVILRQPADIAPPMAAQTDEAGA 163 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSV 241 + N + Y + A N + L L Q Q +R + Sbjct: 164 LL-------NRADGFYAQYTRADNEAAL---RLYERILAGDPQNAAALAGQANALTQRVI 213 Query: 242 RLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLL 301 R + Q + + TP S Q + + + L Sbjct: 214 RWGLEGQANRTTLTE-----ALQSGELETPRSQAALERAEALAQEATRLDPGHARAWRAL 268 Query: 302 AECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILF 361 + A D I + + + + LSG + L Sbjct: 269 GLI---------KAAQSDFDAARRAYDRALVIDPENWGAMINLSELEDLSGHPERQADLL 319 Query: 362 EQA------------KIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAV 409 ++ + + A + + ++A + + L L+P +AV Sbjct: 320 ARSFEVMSRDYAANPVAIRPWQSEVGLAVARLRAEAGEPQQAELWYRRVLALDPLNVEAV 379 >UniRef50_B6B8M4 Transcriptional regulator, sarp family n=2 Tax=Rhodobacterales RepID=B6B8M4_9RHOB Length = 552 Score = 129 bits (323), Expect = 3e-28, Method: Composition-based stats. Identities = 61/489 (12%), Positives = 131/489 (26%), Gaps = 66/489 (13%) Query: 27 NEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVW----KNIIVSDESLTRCIYSLRCIF 82 V + K ++ +L + G + + + +++W SL + +LR Sbjct: 20 GANVQLGAKHQALMALLSTADGGIRTRAFLEKTLWCLAQPEQA--KASLRTALSTLRRHL 77 Query: 83 EKIGY-------DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF------------ 123 +R I + R + + + + Sbjct: 78 GPEAAKLLFANRERVILDLTRVELDNRAGTAEFMEGFELPHESVFNSWLSDTRAEFSRSS 137 Query: 124 --------------------------PFTTSLNTLDPLILNQELVQIISNK---KIDGLY 154 PF L + + +S Sbjct: 138 AQPVPQAGAAPGRVILDRLLPSIAVLPFVHRSPGAADAPLGSLMSEELSRHLSRSWAFSV 197 Query: 155 TYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL 214 T +A+ F + + S DY ++G + + I+L DA +I S Sbjct: 198 TSYLASRQFDPETVRPAEVSSVAGVDYLISGTVTSDGGRFRAEIDLHDAVREKVIWSRSF 257 Query: 215 P---VDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTP 271 + S + + LQ + K ++A + + Sbjct: 258 EGSKSSLMEGHSSVLRNATLQIGQTAAGEAVRLAGFKPLKALESHVLLMAAISLMQEMDA 317 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSE-LELAAQKALELLDYV 330 RA I L + + + H+ G S E ++ A + D Sbjct: 318 GKFQRAHEILSHL---LEREPNHALPLTWMGFWHVMRVEKGLSPNREEDSRLASRMADAA 374 Query: 331 SDITTVDGKILAIMGLITG-LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 + + GLI+ L+ + ++ ++ A + + A + + + E Sbjct: 375 IEAAPAFSLAHTLKGLISSHLTFRFDLAQDAYDLALRDNPNEALALLMKGATLAYQDMPE 434 Query: 390 EARICIDKSLQLEPRRRKAVVIKE--CVDMYVPNPLKNNIKLYYK--ETESESHRVIIDN 445 A D + QL P + + I+L + E + + Sbjct: 435 AAVQMTDAARQLTPLGPQCYYFDAISALAHLSARNYGRAIELADRSLEAKGAFPVPLRSK 494 Query: 446 ILKLKQLTR 454 + L+ R Sbjct: 495 AIALQMSGR 503 >UniRef50_B1YN09 Transcriptional regulator, winged helix family n=3 Tax=Burkholderia RepID=B1YN09_BURA4 Length = 481 Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats. Identities = 51/415 (12%), Positives = 127/415 (30%), Gaps = 41/415 (9%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 E L + +V + + +L V++ ++G +V KD ++++VW + Sbjct: 20 EHSVIALGEFELNLGMRALYKAGREVPLGSRAFDILSVIVLASGRIVSKDELMDTVWPGV 79 Query: 65 IVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 V + ++ + ++R + + I+T+ +GYRF + + A Sbjct: 80 FVEENNIHVHLSAVRKALGD--HRQLIDTVPGRGYRFKVFDGMSAEPGRDVPTERHAPLF 137 Query: 125 FTTSLNTLDPLILNQELV---QIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 T L + + +I+G + T + + Sbjct: 138 RNADTMTPPRHRLPGRRTLLGRATALDEIEGRFALSRVVTLTGPGGVGKTCLAIEHAHRT 197 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLI----------ASNHLPVDELHNTSQFIIDNIL 231 + ++I+L +A++L + A L +D + + D + Sbjct: 198 ------TAAGTSDVVFIDLEEARSLAAVSQIGPAPSRPAGTLLVLDNAEHIVDEVADLVE 251 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + + L + + + ++ P A+ + ++K Sbjct: 252 RLIGQWHSLRVLLTSRERLRIAPET---------VFRVEPL----ALPADESCRDKLMQS 298 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 + C + + + L + L+ L ++ +L I G+ L Sbjct: 299 PAVELFLERASRCGVRVDDEHQLRLVAEICRRLDGLPLAIELAAGRASVLGIEGVHQRLE 358 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA----RICIDKSLQLE 402 + + + A +L E+A D + L+ Sbjct: 359 ERFLLLAGGYRTA---QPRHRTLRAAFDWSFQRLTHNEQAVVRRIARFDHAFTLD 410 >UniRef50_Q7CST1 Putative uncharacterized protein n=1 Tax=Agrobacterium tumefaciens str. C58 RepID=Q7CST1_AGRT5 Length = 642 Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats. Identities = 46/382 (12%), Positives = 113/382 (29%), Gaps = 19/382 (4%) Query: 82 FEKIGYDRCIETIY-RKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILN-- 138 + ET+ ++ + + + S + P + Sbjct: 222 LRQEDRSPEAETVALKRRIQSLAATIAGPVEPEEGSRRQVLAKPRVAFVRPARVDGQPVP 281 Query: 139 ---QELVQIISNKKID-GLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVN 194 V+ ++N + +T + F H + + + DY + + + Sbjct: 282 TVIHAFVEDVANSLVRYRTFTVLSPHSTFALAHDRVDDSYAMLRADYRIISTVF---DDS 338 Query: 195 TLYIELIDAKNLFLIAS--NHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKN 252 + + LI+ + ++ S L +H + + + + + +++ Sbjct: 339 RMSVALIEDASGEIVWSLEAVLTERHIHAAFRLLSKQVAAALAREIERLQVEPDRNHSGE 398 Query: 253 HYLSDEMLAGKKELY-DFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALH 311 Y ++L G++ L + RA ++F + D+ +A+ L Sbjct: 399 AYR--QLLEGQQLLRGKCDLPLLRRARSLF---RKAVDLDHSLAVARARVAQSLQLEWLM 453 Query: 312 GKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDI 371 +A D +I G + ++ +S F +A+ + + Sbjct: 454 LGGNDPHLLHRAKAEADASVEIDPALGVGHWMCAVVALYQRDFDISAEKFFEAEALAPNS 513 Query: 372 ASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKL-Y 430 A L A H E A +++ L P + ++L Sbjct: 514 ADLLLQHADALAHFGDAEIAWDKFQQAINLNPLAPDIYWWAGASIAFKRQDYGTAVELCG 573 Query: 431 YKETESESHRVIIDNILKLKQL 452 E + + RV+ + L Sbjct: 574 RMENDEPALRVLTASHALHGDL 595 >UniRef50_Q0APN8 Integral membrane protein-like protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0APN8_MARMM Length = 646 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 39/371 (10%), Positives = 106/371 (28%), Gaps = 33/371 (8%) Query: 93 TIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKI 150 TI + S+A+ PF + + L + I + Sbjct: 139 TISADEDNQVAGANAGDAGAEEPPPLSVAVLPFIAMSSDPEDRYFADGLSEEILNYLAAV 198 Query: 151 DGLYTYPMAA-TNFCNDH-ISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFL 208 L + + D S ++ + V G + ++ + ++I A + Sbjct: 199 PELLVTSRTSAFQYRGDDIPSAPEIAAQLGVAHIVEGSVRRSGDRVRVTAQIIRAADDIH 258 Query: 209 IASNHLPV--DELHNTSQFIIDNILQTVHKPERSVRLAK-QDQGYKNHYLSDEMLAGK-- 263 + S +++ I NI + + A+ + G ++ Sbjct: 259 LWSQTYDRTMEDVFAIQDDIAQNITDVLDIVLDEDQRARMLEFGVQDVEAYILYQRAVEI 318 Query: 264 ----KELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA 319 T E++ A+++F+ + + + + L A+ + + E Sbjct: 319 SISAHHHRADTLEALEPALSLFEEVTR---LAPGFSAAHQLHADYYAHQMGRAQRENTED 375 Query: 320 ----AQKALELLDYVSDITTVDGKILAIMGLI----TGLSGQAKVSHILFEQAKIHS--T 369 A + + + D+ + +I ++ + + +QA + Sbjct: 376 SLITLATARDNYNRLLDLAKNSTRDPNRRAMIDVDRLFMNESWVGARTIIDQASRTTGCP 435 Query: 370 DIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDM---YVPNPLKNN 426 A + + + + E+ + Q +P R ++ + + Sbjct: 436 YSA----WLQELTMLSGRSEDFVPYAQRMTQCDPLNRINWLVLTSIAYDAGQYDLAHEAA 491 Query: 427 IKLYYKETESE 437 I ++ Sbjct: 492 IAGLQLDSTDT 502 >UniRef50_A0NQS2 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NQS2_9RHOB Length = 577 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 48/330 (14%), Positives = 101/330 (30%), Gaps = 16/330 (4%) Query: 126 TTSLNTLDPLILNQELVQIISNK--KIDGLYTYPMAATN--FCNDHISQNSFLSRFKPDY 181 ++ L + V+ ++N + +T F +IS+ + + +Y Sbjct: 207 PRHIDQHPDAQLAEAFVEDVANSFSRFKTFVVVSPFSTMRDFRGGNISKWE---KIRSNY 263 Query: 182 FVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPV--DELHNTSQFIIDNILQTVHKPER 239 V + + + + +D +I S + D+LH T + + + + + Sbjct: 264 SVQSFLLPGSQRISFTV--LDDGTGEIIWSAEYSMEPDDLHYTFRLLAKTVAANLAQQIE 321 Query: 240 SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 L YL +L G+ + I RA F + + Sbjct: 322 RQMLDTGRAINSQSYLH--VLRGQNLIKTCNLSMIRRARKEFRQGLT---YDKDLSIARA 376 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI 359 +A+ L +A D +I + G + +I S Sbjct: 377 RIAQTMQLEWLLLGGTDPHLLHRAKAEADAAIEIDSSAGIGYWMAAVIALYQRDYATSEA 436 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 F++A+ S + + L A H K +EA ++ L P + Sbjct: 437 KFQEAETLSPNSSDLLIQHADALAHFGKPKEAWKRFKHAIDLNPLAPDIYWWAGASIAFK 496 Query: 420 PNPLKNNIKLYYKETESESHRVIIDNILKL 449 ++L + + E ++ L L Sbjct: 497 LADYAEAVRLCKQMQDEEPALRVLTASLAL 526 >UniRef50_Q1D1Z4 Serine/threonine protein kinase n=2 Tax=Cystobacterineae RepID=Q1D1Z4_MYXXD Length = 846 Score = 124 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 30/312 (9%), Positives = 79/312 (25%), Gaps = 9/312 (2%) Query: 96 RKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGL 153 G+ + S+A+ P L D L + + + + GL Sbjct: 362 GFGHASMSSGGLVARTPLRPDEQSLAVLPLR-FLGASDQAFLGDGVTEALIDVLSRTRGL 420 Query: 154 YTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNH 213 AT + V G + + + +++ + + S Sbjct: 421 RVQSSGATERFRQERDPRVAARELGVELLVDGTLQAAGKTVRVTLRVVEGASGTQLWSGR 480 Query: 214 LPV--DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTP 271 D+ + + + + LA + + + T Sbjct: 481 FDDADDDPFQLQDRLGQRLAEALRGELTI--LAYRSTVPAEALALYRQALSRMLAHSMTG 538 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 E +T ++L + + + + ++ A L+ Sbjct: 539 ELKDEVITPLEQLHASVPGFPHAAAQHAVA--TLRAGFISTLADEVDWDALARTSLERAR 596 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + + ++ G+ + + + A + A + + +E Sbjct: 597 QVAPELVETKLAQAILATREGRWRDAVVALRTALDTAPTFAPALQLLGNLQCEAGRADEG 656 Query: 392 RICIDKSLQLEP 403 + + LEP Sbjct: 657 LPRLKLAYSLEP 668 >UniRef50_B5WFU1 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. H160 RepID=B5WFU1_9BURK Length = 558 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 56/407 (13%), Positives = 122/407 (29%), Gaps = 44/407 (10%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F L + V + + L +LIVL++ AG VV + M++ W+NI+V + Sbjct: 80 SFGPFTLFPAQRRLERSGSFVQLGSRALDILIVLIQHAGQVVDRRMLMSRAWRNIVVDES 139 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKI--NEDNTSDYSIAIFPFT 126 +L I LR G R ++ + GY F GQ+ + +I + Sbjct: 140 NLRVNIAGLRKALGDGEGRVRYVKNVPGIGYCFVGQLTRERIVAESGSQIAEPSPCVHSA 199 Query: 127 TSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVT 184 E+++ ++ ++ + I+ LS P Sbjct: 200 DFGPGAACPQGRDEVLRTLASDLRRHRLISIVGPGGIGKTTVAIALAKRLSGVFPSEIHV 259 Query: 185 GRINQNNAVNTLYIELIDAKNLFLIAS--------------NHLPVDELHNTSQFIIDNI 230 +++ + + + L L + + +D + Sbjct: 260 ADLSEVADGDAVALTLARLLGLGDLHHVPVTYIANYLSTRRALIILDNCDYVIDEVTALT 319 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGK-----KELYDFTPESIYRAMTIF-DRL 284 +Q + + + + + Y L+ +E+ Y A+ +F R Sbjct: 320 MQILAVSSGTHFVLTSREALRVRYEHVCRLSALEVPPGREVNSIEHAHGYSAVQVFIQRA 379 Query: 285 QNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIM 344 ++ Y ++E + LE + ++ + Sbjct: 380 LEAGASFPQTSKSYAAISE----------------MCRELEGVALAIELAAARVATFGLA 423 Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 G +T L ++++ A SL + E + Sbjct: 424 GTMTLLGTRSRLQWQGCRNAPA---RHRSLAASIGWSYALLSDEERS 467 >UniRef50_Q0ASW4 Integral membrane protein-like protein n=1 Tax=Maricaulis maris MCS10 RepID=Q0ASW4_MARMM Length = 608 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/328 (12%), Positives = 102/328 (31%), Gaps = 26/328 (7%) Query: 121 AIFPFTTSLNTLDPLILNQELVQII--SNKKIDGLYTYPMAA-TNFCNDH-ISQNSFLSR 176 A+ PF + L + I S + L + F D S ++ Sbjct: 136 AVIPFAAFSTAEEDRFFADGLTEEILNSLAALPDLLVTSRTSAFQFRGDDLPSIGEIAAQ 195 Query: 177 FKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHNTSQFIIDNILQTV 234 + V G + ++ + ++LI A + + S +D++ + I +NI + Sbjct: 196 LGVAHVVEGSVRRSGNQVRVTVQLIRASDDVHLWSGTYDRVLDDVFGIQEDIAENIAALM 255 Query: 235 H-KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + +R + G N G + + R + + +++ Sbjct: 256 GVALDDRLRERLRQSGSGNVEAFIAYQRGYEIMARHHFIDASRMIEAEPYFERATELDPT 315 Query: 294 KTECYCLLAECHMSL--------ALHGKSELELAAQKALELLDYVSDITTVDGKILAIMG 345 ++ Y L + + +E A +A L+ + ++L G Sbjct: 316 LSQAYLLQGDYYAHAMVELLVEPGTFQAAEYAALAAEAERLIAAANANADDPDRLLLARG 375 Query: 346 LITGLSGQAKVSHI----LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 S + +F+Q + ++ A+ A + ++ + L+ Sbjct: 376 EQIFFSDDWTDAAEVTDQIFDQTRCLDSNWATNLALLA------SRFDDFIDNDLRHLRC 429 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKL 429 +P + ++ + M + + Sbjct: 430 DPLAHQTRLLTATIMM-HAGRAEEAVAH 456 >UniRef50_A3RZQ6 Putative uncharacterized protein n=3 Tax=Ralstonia solanacearum RepID=A3RZQ6_RALSO Length = 367 Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats. Identities = 20/209 (9%), Positives = 62/209 (29%), Gaps = 11/209 (5%) Query: 108 TKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQI----ISNKKIDGLYTYPMAAT-N 162 + + + + PF + ++ L + ++ + L + Sbjct: 141 PEHPWRSEGRVILVVLPFESLGGGDKYDYFSEGLTEDMITQLARLSPERLGVIARTSAMR 200 Query: 163 FCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELH 220 + + + + + + G + + + +LI + + + ++ Sbjct: 201 YKSTTKTIHQIGQDLGVSHVLEGSVRRAGDRVRVAAQLIRVSDETHLWAETYEGNRHDIL 260 Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYK-NHYLSDEMLAGKKELYDFTPESIYRAMT 279 + I + + + D+ + + L G+ T E + +++ Sbjct: 261 ALQIEVAKAIAREIEIKLTPHEQGRLDRTPAIDAQAHEAYLKGRHFWSKRTEEGMRKSIE 320 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSL 308 F Q + Q Y +A+ MS Sbjct: 321 YF---QLAIEHQPNFAAAYDGVADARMSR 346 >UniRef50_Q3KEV5 Putative transcriptional regulator n=2 Tax=Pseudomonas fluorescens RepID=Q3KEV5_PSEPF Length = 928 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 56/378 (14%), Positives = 120/378 (31%), Gaps = 35/378 (9%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 M L + F ++ +G++ + + ++ + +L++LL AG VV K +I V Sbjct: 1 MSLSPNQAIGFGPYRIHPGQRLVLEGDQPLRLGRRAMDILLILLAHAGEVVSKQQLIAGV 60 Query: 61 WKNIIVSDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVF-KTKINEDNTSDY 118 W + +V D +L + +LR R I T+ ++GY F V ++ T++ Sbjct: 61 WPDSVVEDINLRVHMAALRKALGDGQAGQRYIVTVAQRGYSFVAPVVLQSIEQRPTTANL 120 Query: 119 SIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLS-RF 177 P + ++ L+ + ++ L +++ R Sbjct: 121 GRHNLPLRRTRMIGRQSVV-DSLMTQLPRQRCITLVGPGGIGKTTVALRVAEQLIGRYRD 179 Query: 178 KPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKP 237 + ++ + L+D + +L + Sbjct: 180 GIRLLDLAPLKHPGSICSHLAALLDLSLHDGEPMA-------CLINSLRERQMLLVIDNC 232 Query: 238 ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDF-TPESIYRAMTIFDRLQNKSDIQTLKT- 295 E LS+ +L G +++ T RA + + D Sbjct: 233 E--------HLIDAVALLSESILRGAPQVHILATSRESLRAEGEYVQRLESLDCPPPIAV 284 Query: 296 -------ECYCLLAECHMSLALHGKSELELA-------AQKALELLDYVSDITTVDGKIL 341 E L ++A H E A + L+ + ++ L Sbjct: 285 LDRDQAMEFSALQLFVERAMAAHEHFEPGNADLPLIIDICRRLDGIPLALELAAAQVAGL 344 Query: 342 AIMGLITGLSGQAKVSHI 359 + GL++ L G+ + Sbjct: 345 GLEGLLSQLQGRLPAGNQ 362 >UniRef50_A9GXN7 Protein kinase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GXN7_SORC5 Length = 799 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 99/366 (27%), Gaps = 19/366 (5%) Query: 93 TIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--SNKKI 150 T + SG S+ + PF D L +EL + + Sbjct: 315 TPPQGRTAVSGVTPGASSGGAEHGGKSVVVLPFANQGPASD-AYLAEELTDDLVDTLSMT 373 Query: 151 DGLYTYPMAATNFCN-DHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLI 209 GL P A + + V G + + + + LI + F + Sbjct: 374 PGLRVRPRGALGRRSAPELDPREIGRELGVQVVVGGSVRRRDGTVRISARLISVADGFQL 433 Query: 210 ASNHLPV--DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELY 267 + E+ + + + + + + + + D L G+ E Sbjct: 434 WAKRFDRPEAEVLRINDEVAEAVAEALTLDGAAPNRT----APSDPVALDLFLRGRHEYR 489 Query: 268 DFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELL 327 F PE RA+ +F++ +++ + Y +A C + + A E Sbjct: 490 RFWPEHQERAIALFEQALSRAPEDPMILSAYA-IARCRFWFF------TDRGGELATEAA 542 Query: 328 DYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEK 387 M + + + A + A + Sbjct: 543 SRAVAAAPGLPDARLAMASVRFQRLDVVGAMRELKAALACRSGNAEAEGLIGHILLECGA 602 Query: 388 IEEARICIDKSLQLEPRRRKA--VVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDN 445 EE +L +P A + + + + + I+ + + V+ Sbjct: 603 FEEGARRARSALARDPEVVLAAQALARAYTLLDRWSDADDVIRAHPTVGSGSGYTVLRMR 662 Query: 446 ILKLKQ 451 ++ Sbjct: 663 RALWQR 668 >UniRef50_Q89XL4 Transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89XL4_BRAJA Length = 989 Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats. Identities = 50/400 (12%), Positives = 109/400 (27%), Gaps = 34/400 (8%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 F + + + + + +L+ L+ AG+VV K ++ + W V Sbjct: 49 ILVFGPFRLDPSQRRVERDGSPLQLSGRAFDILLALVRQAGNVVSKTELMATTWPGAAVE 108 Query: 68 DESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFT 126 + SL I +LR R + T+ +GY F V + + + ++ + Sbjct: 109 ENSLRVHIAALRKALGDGNDGVRYLSTVSGQGYCFVAAVSRPEQRQPAPTNPTYVH---- 164 Query: 127 TSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 ++ ++ +Q IS +++ + S ++ G Sbjct: 165 NLPAHPRQMVGREQAIQDIS-ERLRAQRFVTVVGPGGIGKTTVAISAGHALLAEF--AGH 221 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIID-NILQTVHKPERSVRLAK 245 ++ T + A + D ++ + F+ D +L + E + A Sbjct: 222 VHFVGLGETGSAAPVPAIVASSLGLRARSNDPTNSLATFLRDMRMLLILDCCEHVIEAAA 281 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 A + T + R F K A + Sbjct: 282 ALAER-------LYQAAPELHILATSRELLRVEGEFTYRLPPLPSPPEKIVLTAANALAY 334 Query: 306 ------MSLALHGKSELELA---------AQKALELLDYVSDITTVDGKILAIMGLITGL 350 + A G E L + L+ + ++T ++ L Sbjct: 335 PSVKLFVERATAGGGEFALTDANASDVGNLCRRLDGIPLAIELTAGHVGAYGARAMVQLL 394 Query: 351 SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 + A +L + E Sbjct: 395 DQHLNLLWEGRRTAL---PRHRTLRATIEWSYNLLSDAER 431 >UniRef50_Q15PB9 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Pseudoalteromonas atlantica T6c RepID=Q15PB9_PSEA6 Length = 756 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 37/234 (15%), Positives = 73/234 (31%), Gaps = 15/234 (6%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y + +T +P K L VL L + G VV ++ ++ VWK+ +VS Sbjct: 4 QYWIGDFFVNLPRNQITHNEHTQTLPPKALAVLTYLAKHQGDVVSQEDLLNQVWKDTVVS 63 Query: 68 DESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFT 126 SL RCI LR F G + I+T +KGY + + N D Sbjct: 64 PNSLQRCIAQLRKAFGDDGKAQGLIKTHAKKGYSLEAAIRWEDHQKRNVGDSVTLDKSPP 123 Query: 127 TS-----LNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY 181 N + + + + ++S + + + S S D Sbjct: 124 NQHAKLGTNKVVKAGFSAKHIFVLSLFTVLVFALVISITSTLWPSSVHNPSPASPLLIDD 183 Query: 182 F---------VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFI 226 + ++ + + + ++ + ++ + Sbjct: 184 IRLLTSTDNRELASAYSPDGKFIVFQRFPEVMCTSHLWAKNIETQQEFQLTRDL 237 >UniRef50_Q4CAF1 TPR repeat:Sel1-like repeat:Sel1-like repeat n=1 Tax=Crocosphaera watsonii WH 8501 RepID=Q4CAF1_CROWT Length = 353 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 25/224 (11%), Positives = 64/224 (28%), Gaps = 15/224 (6%) Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + K + + +D L + A+ + + ++ Sbjct: 102 NALRKQGKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKK---AIELD 158 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 Y + + ++A+ ++ MG+ Sbjct: 159 PNYATAY---------YNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALRKQ 209 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 G+ + +++A + + A Y + K +EA K++++ P Sbjct: 210 GKYDEAIAAYKKAIEINPNYAFAYNNMGVALRKQGKYDEAIAAYKKAIEINPNDA-FGYN 268 Query: 412 KECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTRI 455 + + I + K E + + V+ N L K+ R+ Sbjct: 269 NMGLALDDQGKYDEAIAAHKKALEIDPNLVLAQNNL--KEAERL 310 Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 16/182 (8%) Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 G E A + ++ + Y + + Sbjct: 63 YFYIGLALRKQGKLEEATAA------YKKAIELDPNYSFAYNNMGNALR---------KQ 107 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 ++A+ ++ D MGL G+ + + +++A + A+ YY Sbjct: 108 GKLEEAIAAYKKAIELDPNDAFAYNNMGLALDDQGKLEEAIAAYKKAIELDPNYATAYYN 167 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 K+EEA K+++L+P V + I Y K E Sbjct: 168 MGNALNRQGKLEEAIAAYKKAIELDP-NYSFAYNNMGVALRKQGKYDEAIAAYKKAIEIN 226 Query: 438 SH 439 + Sbjct: 227 PN 228 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 66/236 (27%), Gaps = 16/236 (6%) Query: 204 KNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGK 263 + I + +D + + F I L+ K E + K+ +Y G Sbjct: 43 REAESIWRQIISIDSNNAIAYFYIGLALRKQGKLEEATAAYKKAIELDPNYSFAYNNMGN 102 Query: 264 KELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKA 323 E A + ++ Y + + + ++A Sbjct: 103 ALRKQGKLEEAIAA------YKKAIELDPNDAFAYNNMGLA---------LDDQGKLEEA 147 Query: 324 LELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHF 383 + ++ MG G+ + + +++A + + Y + Sbjct: 148 IAAYKKAIELDPNYATAYYNMGNALNRQGKLEEAIAAYKKAIELDPNYSFAYNNMGVALR 207 Query: 384 HNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 K +EA K++++ P A V + I Y K E + Sbjct: 208 KQGKYDEAIAAYKKAIEINPNYAFA-YNNMGVALRKQGKYDEAIAAYKKAIEINPN 262 >UniRef50_Q21GQ2 Transcriptional regulatory protein-like protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21GQ2_SACD2 Length = 425 Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats. Identities = 51/430 (11%), Positives = 127/430 (29%), Gaps = 56/430 (13%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 S+HF + T+ +T V + K +++ L+E+ +V +D + E +W V Sbjct: 1 MSFHFNDVEIDTKQYRITCAGLTVSVEPKVFDIIVYLIENRNRLVSRDELFEKIWDARAV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF-- 123 SD +L+ I S R G I+T+ +GY+F +V + + ++ + S A Sbjct: 61 SDTTLSNHIKSARKALGDDGEQQHTIKTVRGRGYQFIAEVSVSALTDEPIAASSSAPSER 120 Query: 124 --PFTTSLNTLDPLILNQELVQIIS-NKKIDGLYTYPMAATNFC------NDHISQN--- 171 P ++ + + + I LY N +S Sbjct: 121 SAPVQSTNRFQPKATIAFLIFGCLCVLTLIGYLYNLSRTIEPQQPNLSPLNPTLSPPLHA 180 Query: 172 ---SFLSRFKPDYFVTGRINQ-----NNAVNTLYIELIDAKNLFLIA----SNHLPVDEL 219 + + V+ + I+ + + + S +++ Sbjct: 181 QNTTIPYILVVPFSVSSGEQSKWEPFADQTTRELIQYLRKISGIRVVPPPSSFTFKTNKV 240 Query: 220 HNTSQFIIDNILQTVHKPERSVRLA--KQDQGYKNHYLSDEMLAGKKEL-----YDFTPE 272 + + + + + +N + + + ++ F + Sbjct: 241 RAHITNQLPEVNYIIDGVVKEDGNGNFRISVELENITDNTLVWSNNYDIKVNENNQFKVQ 300 Query: 273 SIYRA-------MTIFDRLQNKSDIQTLKT-ECYCLLAECHMSLALHGKSELELAAQKAL 324 + A + + + + + Y E ++ + + +A+ Sbjct: 301 AEIAASVTASLQVEVLEAERRTLAQVPTSSVTAY----ELYVQGQYQLGAMTHTSVLQAI 356 Query: 325 ELLDYVSDITTVDGKILAIM--GLITGLSGQAKVSHILFEQ-------AKIHSTDIASLY 375 L +I + T ++ L + + + A + Sbjct: 357 TLFSDAIEIDPNFEEAYIAKSDAFRTIMTW-FAKPKDLLPKVITSSIDVIDINPNSARAH 415 Query: 376 YYRALVHFHN 385 L + H Sbjct: 416 SSLGLAYVHA 425 >UniRef50_B7K3M3 TPR repeat-containing protein n=7 Tax=Cyanothece RepID=B7K3M3_CYAP8 Length = 878 Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 13/164 (7%) Query: 276 RAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITT 335 A IF R+ ++ + Y L + +A+ + Sbjct: 47 EAEAIFRRV---IELDPNLADAYNNLGNALYY---------QGKLDEAIAAYQKAIQLNP 94 Query: 336 VDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 D +G G+ + + +++A + + A YY + K+EEA Sbjct: 95 NDADAYNNLGNALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGIALSDQGKLEEAIAAY 154 Query: 396 DKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 K++QL P +A + + L+ I Y K + + Sbjct: 155 QKAIQLNPNFTQAYY-NLGIALSDQGKLEEAIAAYQKAIQLNPN 197 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 27/217 (12%), Positives = 60/217 (27%), Gaps = 16/217 (7%) Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD 282 F + K + + ++ + G Y + A Sbjct: 31 QLFQQGRTAGKMGKYTEAEAIFRRVIELDPNLADAYNNLGNALYYQGKLDEAIAA----- 85 Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q + + Y L + ++A+ + Sbjct: 86 -YQKAIQLNPNDADAYNNLG---------NALSDQGKLEEAIAAYQKAIQLNPNYADAYY 135 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G+ G+ + + +++A + + YY + K+EEA K++QL Sbjct: 136 NLGIALSDQGKLEEAIAAYQKAIQLNPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLN 195 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 P A ++ L I Y K + + + Sbjct: 196 PNYADAYY-NLGNALFDQGKLDEAIAAYQKAIQLDPN 231 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 55/166 (33%), Gaps = 13/166 (7%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + A+ + + + + Y L + ++A+ + Sbjct: 113 LEEAIAAYQK---AIQLNPNYADAYYNLGIA---------LSDQGKLEEAIAAYQKAIQL 160 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + +G+ G+ + + +++A + + A YY F K++EA Sbjct: 161 NPNFTQAYYNLGIALSDQGKLEEAIAAYQKAIQLNPNYADAYYNLGNALFDQGKLDEAIA 220 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 K++QL+P A +Y L+ I Y K + + Sbjct: 221 AYQKAIQLDPNDANA-YNNLGAALYKQGKLEEAIAAYQKAIQLNPN 265 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 54/176 (30%), Gaps = 13/176 (7%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + A+ + + + + Y L + +A+ + Sbjct: 181 LEEAIAAYQK---AIQLNPNYADAYYNLGNALF---------DQGKLDEAIAAYQKAIQL 228 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D +G G+ + + +++A + ++A Y + K +EA Sbjct: 229 DPNDANAYNNLGAALYKQGKLEEAIAAYQKAIQLNPNLAEAYNNLGVALSDQGKRDEAIA 288 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 K++QL P +A V + I Y K + + + N L + Sbjct: 289 AYQKAIQLNPNLAEA-YNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGV 343 Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats. Identities = 20/161 (12%), Positives = 44/161 (27%), Gaps = 10/161 (6%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q + Y L + +A+ + Sbjct: 319 EAIAAYQKAIQLNPNFALAYNNLGVA---------LSDQGKRDEAIAAYQKAIQLNPNFA 369 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +G+ G+ + +++A + + A Y + + K +EA K+ Sbjct: 370 LAYNNLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGVALRNQGKRDEAIAAYQKA 429 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 +QL+P A + + I Y K + + Sbjct: 430 IQLDPNDANA-YNNLGLALRNQGKRDEAITAYQKAIQLNPN 469 Score = 117 bits (293), Expect = 9e-25, Method: Composition-based stats. Identities = 28/218 (12%), Positives = 65/218 (29%), Gaps = 23/218 (10%) Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + + +++++L D N+ + GK + A+ + + + Sbjct: 217 EAIAAYQKAIQLDPNDANAYNNLGAALYKQGK----------LEEAIAAYQK---AIQLN 263 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 E Y L + +A+ + + +G+ Sbjct: 264 PNLAEAYNNLGVA---------LSDQGKRDEAIAAYQKAIQLNPNLAEAYNNLGVALSDQ 314 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 G+ + +++A + + A Y + K +EA K++QL P Sbjct: 315 GKRDEAIAAYQKAIQLNPNFALAYNNLGVALSDQGKRDEAIAAYQKAIQLNP-NFALAYN 373 Query: 412 KECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 V + I Y K + + + N L + Sbjct: 374 NLGVALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGV 411 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 42/161 (26%), Gaps = 10/161 (6%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q + Y L + + +A+ + D Sbjct: 387 EAIAAYQKAIQLNPNFALAYNNLGVALRN---------QGKRDEAIAAYQKAIQLDPNDA 437 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +GL G+ + +++A + + A Y + K EEA K+ Sbjct: 438 NAYNNLGLALRNQGKRDEAITAYQKAIQLNPNFALAYNNLGNALYSQGKREEAIAAYQKA 497 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 +QL P + I Y K + + Sbjct: 498 IQLNP-NFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPN 537 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 23/187 (12%), Positives = 43/187 (22%), Gaps = 16/187 (8%) Query: 262 GKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ 321 G + A Q + Y L S + + Sbjct: 444 GLALRNQGKRDEAITA------YQKAIQLNPNFALAYNNLGNALYS---------QGKRE 488 Query: 322 KALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALV 381 +A+ + +G G+ + +++A + + A Y Sbjct: 489 EAIAAYQKAIQLNPNFALAYNNLGNALSDQGKRDEAIAAYQKAIQLNPNFALAYNNLGNA 548 Query: 382 HFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 K+ EA K++QL P + L I Y K Sbjct: 549 LSDQGKLNEAIATYQKAIQLNP-NFALAYNNLGNALKDQGKLNEAIAAYQKALSLPEDTS 607 Query: 442 IIDNILK 448 + Sbjct: 608 VTPTTAH 614 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 20/189 (10%), Positives = 42/189 (22%), Gaps = 57/189 (30%) Query: 262 GKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQ 321 G E A Q + Y L + Sbjct: 478 GNALYSQGKREEAIAA------YQKAIQLNPNFALAYNNLG---------NALSDQGKRD 522 Query: 322 KALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASL------- 374 +A+ + +G G+ + +++A + + A Sbjct: 523 EAIAAYQKAIQLNPNFALAYNNLGNALSDQGKLNEAIATYQKAIQLNPNFALAYNNLGNA 582 Query: 375 -----------------------------------YYYRALVHFHNEKIEEARICIDKSL 399 + LV+ K+EEA + +L Sbjct: 583 LKDQGKLNEAIAAYQKALSLPEDTSVTPTTAHTLAHNNLGLVYQPQGKLEEALREYEAAL 642 Query: 400 QLEPRRRKA 408 +++P+ A Sbjct: 643 KIDPKFEYA 651 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 12/120 (10%), Positives = 26/120 (21%), Gaps = 17/120 (14%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q + Y L + + +A+ + Sbjct: 557 EAIATYQKAIQLNPNFALAYNNLG---------NALKDQGKLNEAIAAYQKALSLPEDTS 607 Query: 339 --------KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 +GL+ G+ + + +E A R V ++ E Sbjct: 608 VTPTTAHTLAHNNLGLVYQPQGKLEEALREYEAALKIDPKFEYAIKNRDAVLALLKQPTE 667 >UniRef50_Q1YZ13 Transcriptional activator CadC n=1 Tax=Photobacterium profundum 3TCK RepID=Q1YZ13_PHOPR Length = 509 Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats. Identities = 62/406 (15%), Positives = 132/406 (32%), Gaps = 56/406 (13%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 K Y + + + V I + +L+ L + +D +I VW Sbjct: 3 KKRYKIDNWIFIPSENKCILDERSVVIDNRLSNLLLFLCQHPHQTFSRDELINEVWNGSF 62 Query: 66 VSDESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 ++D+ +T+ I+ LR I + I TI ++GY+ +V + Sbjct: 63 LTDQVITQSIFELRKILKSNQRHPHGYIITIPKRGYKLDAEVEIQDDS------------ 110 Query: 124 PFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFV 183 +T N D + L +NK+ P +A ++ + + + S Sbjct: 111 -LSTEDNNQDTENAHALLNTAHTNKEAVREVPQPSSAPSYQKEREAAHQRRS-------- 161 Query: 184 TGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNT--SQFIIDNILQTVHKPERS- 240 + L+ A L P +T + +++ K + + Sbjct: 162 -----SRGKLIAFCCLLLVATLASLFYYVKTPESRATSTRKFSSLEPSVINVSIKIDSNT 216 Query: 241 --VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECY 298 + + + G N L+D L T S ++ L ++ + + E Y Sbjct: 217 TDPKTTRIEIGAINSLLNDLQYNKNFRLVRNTTPSPVAGKSLTFHLLEENGKKYIDVEYY 276 Query: 299 CLLA-ECHMSL-ALHGKSELELAAQKALELLDYVSDIT-------------TVDGKILAI 343 ++ H+ L +++L L ++ L L + I + + L + Sbjct: 277 NNISNFMHLDRKYLINENDLLLTIKQMLTNLLHALHINVPQQTIDSALSEMPTNPQALEL 336 Query: 344 MGLITGL-----SGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH 384 G+ + L++QA D +Y A+ + + Sbjct: 337 TMQAIGIVFNNNDADKLKALTLYQQALDIEPDN---HYLIAMNYIY 379 >UniRef50_A5L3N2 DNA-binding transcriptional activator n=2 Tax=Vibrionales RepID=A5L3N2_9GAMM Length = 492 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 68/489 (13%), Positives = 151/489 (30%), Gaps = 87/489 (17%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 LE + E L + +G + V I ++ +L L + G +D +I +VW Sbjct: 2 LEKNSCFSVDEWLFVPNEGQILFAERTVTIDKRLTKLLEFLCLNPGQTHTRDELINNVWS 61 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSI 120 +I+SD+ +T+ ++ LR + ++ I T+ ++GY+F V ++KI D ++ Sbjct: 62 GMILSDQVVTQAVFELRKVLKQNSQQHNSYIITVPKRGYKFEADVIQSKIETDQVAEPEP 121 Query: 121 AIFPFTTSLNTLDPLILNQELVQIISNKKIDGL---------------YTYPMAATNFCN 165 + + + L Q V + L Y A+++ + Sbjct: 122 STAQPSDPEQSPPADKLPQTDVSEKTKPNKRNLMIGLLLGAIVVMESGYILYSASSSTPD 181 Query: 166 DHISQNSFLSRFKPDY-------------FVTGRI------------------------- 187 + ++ + L ++ Y + G I Sbjct: 182 EKVAPATQLRHYEFRYVMLDISDDVKNDPVLYGTITKFIEYLSAYSGIRIVHSEPLQKIA 241 Query: 188 ----------NQNNAVNTLYIELIDAKNLFLIASNHLPVD--ELHNTSQFIIDNILQTVH 235 +++ L + + + + P + ELH+T ++D+IL ++ Sbjct: 242 AIKLTFGTSRSRDGKHTRLTMRYHNNISDLSHLNRRYPTELPELHHTLYRMVDDILDALY 301 Query: 236 KPERSVRLAKQDQGYKNHYLSDEM-LAGKKELYDFTPESIYRAMTIFDRLQNKSD-IQTL 293 L + + + L+G LY + M F + Q + Sbjct: 302 IKVPKEELTESISQLPMAPDALKYTLSGLGVLY--NEAELPMVMDYFAKAQQADPSNDLV 359 Query: 294 KTECYCLLAE-CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSG 352 Y + + K + Q+A L+ + + + +I Sbjct: 360 FVANYIGKVMNTFYASSGSKKQAIAELNQEAKPRLERLLE-EGKLARAYDANAIIALSED 418 Query: 353 QAKVSHILFEQAKIHSTDIA--SLYYYRALVHFHNEKIEEARICID--------KSLQL- 401 + + + Y A A+ K++Q+ Sbjct: 419 DPEKAMKIL---LSMPPQNQSILTYLLLAKAEESRGNAGAAKELYKATQGNSSLKAIQMA 475 Query: 402 EPRRRKAVV 410 P + + Sbjct: 476 SPLFFDSNL 484 >UniRef50_B7K9Z0 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K9Z0_CYAP7 Length = 632 Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats. Identities = 28/196 (14%), Positives = 69/196 (35%), Gaps = 22/196 (11%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 + + A+ +++ +I E Y L + + ++A+ + Sbjct: 173 YNQGKLEEAIAAYNK---AIEINPNYAEVYSNLGFALYN---------QGKLEEAIAAYN 220 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 +I D +G+ G+ + + + A + + A Y + ++ K+ Sbjct: 221 TAIEINPNDAFAYNNLGIALSNQGKLEEAIAAYNTAIEINPNDAFAYNNLGVALYNQGKL 280 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNI-------KLYYKETESESHRV 441 EEA + ++++ P A I + ++ L+ I L K+ + S Sbjct: 281 EEAIAAYNTAIEINPNDAFA-YIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHT 339 Query: 442 IIDNIL--KLKQLTRI 455 + L L+Q ++ Sbjct: 340 LAHTTLGYALQQQGKL 355 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 55/161 (34%), Gaps = 13/161 (8%) Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 + A+ +++ +I Y L + + ++A+ + Sbjct: 140 NQGKLEEAIAAYNK---AIEINPNYAFAYIGLGIALYN---------QGKLEEAIAAYNK 187 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 +I ++ + +G G+ + + + A + + A Y + + K+E Sbjct: 188 AIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFAYNNLGIALSNQGKLE 247 Query: 390 EARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLY 430 EA + ++++ P A V +Y L+ I Y Sbjct: 248 EAIAAYNTAIEINPNDAFA-YNNLGVALYNQGKLEEAIAAY 287 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 16/196 (8%) Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 K E ++ +Y G Y E A +I Sbjct: 74 GKLEEAIAAYNTAIEINPNYAEVYNNLGVALYYQGKLEEAIAA------YNTAIEINPNY 127 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 E Y L + + ++A+ + +I +G+ G+ Sbjct: 128 AEVYSNLGFALSN---------QGKLEEAIAAYNKAIEINPNYAFAYIGLGIALYNQGKL 178 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKEC 414 + + + +A + + A +Y ++ K+EEA + ++++ P A Sbjct: 179 EEAIAAYNKAIEINPNYAEVYSNLGFALYNQGKLEEAIAAYNTAIEINPNDAFA-YNNLG 237 Query: 415 VDMYVPNPLKNNIKLY 430 + + L+ I Y Sbjct: 238 IALSNQGKLEEAIAAY 253 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 13/170 (7%) Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 + A IF ++ I + Y L + + ++A+ + Sbjct: 38 NEGNFTEAERIFRQV---IKINPNNADAYRYLGIALRN---------QGKLEEAIAAYNT 85 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 +I ++ +G+ G+ + + + A + + A +Y + K+E Sbjct: 86 AIEINPNYAEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAEVYSNLGFALSNQGKLE 145 Query: 390 EARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 EA +K++++ P A I + +Y L+ I Y K E + Sbjct: 146 EAIAAYNKAIEINPNYAFA-YIGLGIALYNQGKLEEAIAAYNKAIEINPN 194 Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 47/128 (36%), Gaps = 1/128 (0%) Query: 312 GKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDI 371 ++ E +A + V I + +G+ G+ + + + A + + Sbjct: 34 NAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIEINPNY 93 Query: 372 ASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYY 431 A +Y + ++ K+EEA + ++++ P + V + L+ I Y Sbjct: 94 AEVYNNLGVALYYQGKLEEAIAAYNTAIEINPNYAE-VYSNLGFALSNQGKLEEAIAAYN 152 Query: 432 KETESESH 439 K E + Sbjct: 153 KAIEINPN 160 Score = 80.9 bits (198), Expect = 9e-14, Method: Composition-based stats. Identities = 19/162 (11%), Positives = 50/162 (30%), Gaps = 25/162 (15%) Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 + A+ + +I Y L + + ++A+ + Sbjct: 242 NQGKLEEAIAAY---NTAIEINPNDAFAYNNLGVALYN---------QGKLEEAIAAYNT 289 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIH-------STDIASLYYYRALVH 382 +I D +G+ G+ + + + + ++ + Sbjct: 290 AIEINPNDAFAYIGLGIALHDQGKLEEAIAAYNKTLSLADKKADRASVHTLAHTTLGYAL 349 Query: 383 FHNEKIEEARICIDKSLQLEPRRRKA------VVIKECVDMY 418 K+EEA +K+L+++P A +I+ + +Y Sbjct: 350 QQQGKLEEAIAEYEKALKIDPNNTTAQNNLKEALIQLTIKLY 391 Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 1/90 (1%) Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 L G G + +F Q + + A Y Y + + K+EEA + +++ Sbjct: 29 LFEQGNAAQNEGNFTEAERIFRQVIKINPNNADAYRYLGIALRNQGKLEEAIAAYNTAIE 88 Query: 401 LEPRRRKAVVIKECVDMYVPNPLKNNIKLY 430 + P + V V +Y L+ I Y Sbjct: 89 INPNYAE-VYNNLGVALYYQGKLEEAIAAY 117 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 31/110 (28%), Gaps = 5/110 (4%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 + + A+ + +I Y L E A K L L D Sbjct: 275 YNQGKLEEAIAAY---NTAIEINPNDAFAYIGLGIALHDQGKL--EEAIAAYNKTLSLAD 329 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR 378 +D +V +G G+ + + +E+A + + Sbjct: 330 KKADRASVHTLAHTTLGYALQQQGKLEEAIAEYEKALKIDPNNTTAQNNL 379 >UniRef50_D1TLX7 Transcriptional regulator, winged helix family n=1 Tax=Burkholderia sp. CCGE1002 RepID=D1TLX7_9BURK Length = 476 Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats. Identities = 44/360 (12%), Positives = 102/360 (28%), Gaps = 41/360 (11%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 + + + + + + +L L + G VV + ++++VW +V D Sbjct: 2 KIGRIELDMNARCVRRDGQDLRLGSRAFDLLATLASANGRVVSRSELMQTVWPGTVVEDC 61 Query: 70 SLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 ++ I +LR I T+ R+GY+ + S + Sbjct: 62 NIDVNISALRKALGDD--RDLIVTVARRGYQLAPSRHIQPKLRTAASPRPLPRRVGNLVG 119 Query: 130 NTLDPLILNQELV--QIISNKKIDGL------YTYPMAATNFCNDHISQNSFLSRFKPDY 181 + + LV Q+++ G+ C ++ S D Sbjct: 120 TDVAVAKAAEALVGSQVLTLTGTGGVGKSSLALELAYRIAPSCPATVAFVDLSSAATIDE 179 Query: 182 FVTGRINQNNAVN--------TLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQT 233 ++ L L +A L +D + + + Sbjct: 180 VLSAIEYGCGVDMPEDVVCSERLGAALSNAP-----W--LLILDGAEHVISVVAQIVEAL 232 Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + L + K + ++ P + + + DR D Sbjct: 233 LAASLNIQFLVTSREPLKIRAET---------VFRVNPLGVPK---LTDRCDEMLDSPA- 279 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALEL--LDYVSDITTVDGKILAIMGLITGLS 351 + + A+ + E+ A+ L + ++ ++L + G+ LS Sbjct: 280 -VQLFVRRAQQMHPRFVPRIGEIASIAKICQRLDGIPLAIELAAGRAELLGVEGVRRLLS 338 >UniRef50_Q01QR8 Transcriptional regulator, CadC n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01QR8_SOLUE Length = 276 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 73/262 (27%), Gaps = 39/262 (14%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 + F L + V + + VL +LL S G +V +D + ++W Sbjct: 5 QENGRIRFGAFDFDPLTRQLRREGTPVRLQPQPAQVLGLLLASPGEIVTRDTLRTALWGT 64 Query: 64 IIVSD--ESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTK----------- 109 V D L C+ +R R I+T+ ++GY+F V Sbjct: 65 QTVVDFDRGLNFCVAQIRLALGDSSDSPRYIKTLPKRGYQFIAPVASPPAAAPPNAKPRR 124 Query: 110 --------------------INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQ----II 145 N + +A+ F + L + Sbjct: 125 SLIALACAIPLLVVAIFLILRNSAPPAPRRVAVARFENQTGDPSLDRVADALTDAVIVEL 184 Query: 146 SNKKIDGLYTYP-MAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAK 204 ++ L A + + DY + G + +N +I+ I Sbjct: 185 ASAGEHRLDIIGNAAILRQPRPQHDLLAIHAALHVDYILLGSLQRNPNGLQAFIQFITLP 244 Query: 205 NLFLIASNHLPVDELHNTSQFI 226 I LP D + + Sbjct: 245 GQNHIKVARLPADSPELPQRIV 266 >UniRef50_Q467V6 Putative uncharacterized protein n=2 Tax=cellular organisms RepID=Q467V6_METBF Length = 560 Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 10/163 (6%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 + R I + + L + +AL+ + Sbjct: 405 HLGRYDEALQAYDKAIAINPNYVDAWNSKGNALYRLGKY---------DEALQASNKAIA 455 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 I G G+ + +++A + + A + + + + +EA Sbjct: 456 INPNYADAWNGKGNALYGLGRYDEALQAYDKAIAINPNYAYAWNGKGNALYRLGRYDEAL 515 Query: 393 ICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 DK++ + P A K +Y + ++ K TE Sbjct: 516 QAYDKAIAINPNYADAWNGK-GNALYGLSRYDEALQASNKATE 557 Score = 99.0 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 23/203 (11%), Positives = 64/203 (31%), Gaps = 15/203 (7%) Query: 199 ELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDE 258 EL ++ + + + +D ++ + I N+L + + + +++ + +Y+ Sbjct: 371 ELGRDEDALKVINKSIDIDPNNDYAWNIKGNVLYHLGRYDEALQAYDKAIAINPNYVDAW 430 Query: 259 MLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELEL 318 G + +A I + + L + Sbjct: 431 NSKGNALYRLGKYDEALQA------SNKAIAINPNYADAWNGKGNALYGLGRY------- 477 Query: 319 AAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYR 378 +AL+ D I G G+ + +++A + + A + + Sbjct: 478 --DEALQAYDKAIAINPNYAYAWNGKGNALYRLGRYDEALQAYDKAIAINPNYADAWNGK 535 Query: 379 ALVHFHNEKIEEARICIDKSLQL 401 + + +EA +K+ +L Sbjct: 536 GNALYGLSRYDEALQASNKATEL 558 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 1/113 (0%) Query: 321 QKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRAL 380 + AL++++ DI + I G + G+ + +++A + + + + Sbjct: 376 EDALKVINKSIDIDPNNDYAWNIKGNVLYHLGRYDEALQAYDKAIAINPNYVDAWNSKGN 435 Query: 381 VHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 + K +EA +K++ + P A K +Y ++ Y K Sbjct: 436 ALYRLGKYDEALQASNKAIAINPNYADAWNGK-GNALYGLGRYDEALQAYDKA 487 Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%), Gaps = 1/86 (1%) Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 G+ + + + ++ + + + V +H + +EA DK++ + P Sbjct: 369 LMELGRDEDALKVINKSIDIDPNNDYAWNIKGNVLYHLGRYDEALQAYDKAIAINPNYVD 428 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKE 433 A K +Y ++ K Sbjct: 429 AWNSK-GNALYRLGKYDEALQASNKA 453 >UniRef50_Q01VS7 Tetratricopeptide TPR_2 repeat protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01VS7_SOLUE Length = 509 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 30/228 (13%), Positives = 77/228 (33%), Gaps = 7/228 (3%) Query: 220 HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMT 279 + + IL ++ + A Q + D ++ G+ L T ++ + Sbjct: 161 FLLATVALVVILASIAVLWITRTYAAARQNNADSVSEDLLIRGRYSLDRQTEGALREGIL 220 Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 F++ + Y LA+ + L+ G +KA ++ + Sbjct: 221 SFEQ---AAARSPKFAPAYAALADGYNLLSQFGYIAPREGMEKARTAALKSLELNPRLAE 277 Query: 340 ILAIMG-LITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + +I + + +A S + + + + + +++EA + + ++ Sbjct: 278 GHVALAAVIEAYDWDWAAAEREYRKALQLSPGLPAAHLWYGMFLRDQGRLKEALLELRRA 337 Query: 399 LQLEPRRRKAVVIKEC---VDMYVPNPLKNNIKLYYKETESESHRVII 443 QLEP A + C ++ L+ + E + +I+ Sbjct: 338 AQLEPYSVVASINLACGLLLEGNYSAALEQANRAVELAPELPTASLIV 385 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 28/231 (12%), Positives = 64/231 (27%), Gaps = 10/231 (4%) Query: 203 AKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAG 262 A + + + L + ++ A ++ Y+ L Sbjct: 253 APREGMEKARTAALKSLELNPRLAEGHVALAAVIEAYDWDWAAAEREYRKALQLSPGLPA 312 Query: 263 KKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQK 322 Y R L+ + ++ Y ++A +++ L LE Sbjct: 313 AHLWYGMFLRDQGRLKEALLELRRAAQLEP-----YSVVASINLACGLL----LEGNYSA 363 Query: 323 ALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH 382 ALE + ++ I+ + + S E+A+ ++ A Sbjct: 364 ALEQANRAVELAPELPTASLIVAHAARAAERTAESDAALERARQAASGNPHALALVACEL 423 Query: 383 FHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 + EE+ + + L R+R V + L+ + Sbjct: 424 AKLGRHEESMRVVRELEALS-RQRYVSPFDLGKVSLVMGDGDQALNLFEEA 473 >UniRef50_B2T985 Transcriptional regulator, winged helix family n=2 Tax=Burkholderia RepID=B2T985_BURPP Length = 504 Score = 114 bits (284), Expect = 9e-24, Method: Composition-based stats. Identities = 56/411 (13%), Positives = 119/411 (28%), Gaps = 52/411 (12%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F + L + V + + L +LI L++ AG VV + ++ W+NI+V + Sbjct: 26 SFGPFTLFPTERRLERSGSVVQLGSRALDILIALIQHAGQVVDRRKLMSRAWRNIVVDES 85 Query: 70 SLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +L I LR R ++ + GY F GQ+ + +I +++S +S FP S Sbjct: 86 NLRVNIAGLRKALGDGEDGVRYVKNVPGIGYCFVGQLTRERIATESSSHFSE-PFPRVHS 144 Query: 129 LNTLDPLILNQELVQII----------SNKKIDGLYTYPMAATNFCNDHISQNSFLSRFK 178 Q +++ I G F S Sbjct: 145 GGFAPGAARPQGRDEVLRTLASDLRRHRLISIVGPGGIGKTTVAIALAKRLSGEFPSEIH 204 Query: 179 PDYFVTGRINQNNAVNTLY-IELIDAKNLFLIA-----------SNHLPVDELHNTSQFI 226 + L L+ +L + + +D + Sbjct: 205 VADL---SEVAHGDTVALTLARLLGLGDLHHVPVTCIANYLSTRRALIILDTCDYVIDEV 261 Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKK-----ELYDFTPESIYRAMTIF 281 Q + + + + + Y L+ + E+ Y A+ +F Sbjct: 262 TSLTTQILAVSSATYFVLTSREALRVRYEHVCRLSALEVPPGSEVISIEHAHAYPAVQVF 321 Query: 282 -DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 R + Y ++ + LE + ++ Sbjct: 322 IQRALEGGARFPQTRKSYATIS----------------GICRELEGVALAIELAAARVAT 365 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 + G + L ++++ A ++A + + E++ Sbjct: 366 FGLAGTMMLLGTRSRLRWQGCRNAPARHRNLA---ASIGWSYALLSEQEKS 413 >UniRef50_B1KK09 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KK09_SHEWM Length = 711 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 103/318 (32%), Gaps = 37/318 (11%) Query: 1 MDLENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESV 60 M L E L E + I ++L +L +L++ G V +++I++ + Sbjct: 1 MSLSCSSKVMVNEIEVDFVALKLLIDGEWLEIEARQLALLKLLIKHHGEAVSRNLIMDEI 60 Query: 61 WKNIIVSDESLTRCIYSLRCIF-EKIGYDRCIETIYRKGYRFSGQVFKTKINEDNT--SD 117 W + IVSD S+++ I LR + G R I T+ R GY+ + + K E S Sbjct: 61 WHDTIVSDNSVSQAITQLRKSLQDDKGTPRFIRTVPRVGYQLIATIEEVKEPESLEGLSV 120 Query: 118 YSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRF 177 P T + ++L L Q+ + + S Sbjct: 121 VKRTSKPTTALIGIALGMVLMFGLFQLTKPS-------LSLPTYEYETRLTSVPGP---- 169 Query: 178 KPDYFVTGRINQN-NAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHK 236 G + + + + ++ D ++ + + +H+ Sbjct: 170 ------EGFLRYSPDGRYLAFSQISDNRSQMDLVVYDSQTETIHSIKS---------TGY 214 Query: 237 PERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTE 296 E + D + +Y D + + + TP +R ++ D + + Sbjct: 215 SEEAPEW-SPDSQWLIYYRHDPLSCDIRIMSVSTPVETWR----LSPDRHLGDCEPGYSR 269 Query: 297 C--YCLLAECHMSLALHG 312 + + ++ Sbjct: 270 QKMHWVSSDTLYRRRWRD 287 >UniRef50_B2J9B9 TPR repeat-containing protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J9B9_NOSP7 Length = 532 Score = 114 bits (284), Expect = 1e-23, Method: Composition-based stats. Identities = 23/165 (13%), Positives = 49/165 (29%), Gaps = 13/165 (7%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 T + AM + R + +C L + +A+ Sbjct: 313 HTQGKLSEAMAAYQR---ALRVDPNYASAHCNLGVTLY---------HQGKLSEAIAAYQ 360 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 I +G G+ + +++A + AS + + +H K+ Sbjct: 361 KALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRALRVDPNYASAHCNLGVTLYHQGKL 420 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 EA ++L+L+P + ++ L I Y + Sbjct: 421 SEAIAAYQRALRLDPNDADTHC-NLGIALHDQGKLSEAIAAYQRA 464 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 25/228 (10%), Positives = 69/228 (30%), Gaps = 23/228 (10%) Query: 227 IDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQN 286 + + + +R++R+ +Y S G + + A+ + + Sbjct: 315 QGKLSEAMAAYQRALRVD-------PNYASAHCNLGVTLYHQGK---LSEAIAAYQK--- 361 Query: 287 KSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 I +C L + + + +A+ + +G+ Sbjct: 362 ALQIDPNYVNAHCNLGKALHT---------QGKLSEAMAAYQRALRVDPNYASAHCNLGV 412 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 G+ + +++A + A + + K+ EA ++L ++P Sbjct: 413 TLYHQGKLSEAIAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAAYQRALLIDPNDA 472 Query: 407 KAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQLTR 454 A + + L+ I + +I N L++ + + Sbjct: 473 DAHC-NLGIALKGQGKLEEAIAELEIAVRLNPNNTVIRNNLEIYRNEK 519 Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats. Identities = 34/254 (13%), Positives = 77/254 (30%), Gaps = 19/254 (7%) Query: 186 RINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAK 245 + +L +A + L +D + + +L T K ++ + Sbjct: 168 SLINEADRLREAKKLEEA---VVKYKAALSLDPNSVYAHNALGVVLHTQGKLSEAIAAYQ 224 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 + +Y++ GK T + AM + R + + +C L Sbjct: 225 KALQIDPNYVNAHCNLGKAL---HTQGKLSEAMAAYQR---ALRLDPNDADTHCNLGIAL 278 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 + +A+ I +G G+ + +++A Sbjct: 279 H---------DQGKLSEAIAAYQKALQIDPNYVNAHCNLGKALHTQGKLSEAMAAYQRAL 329 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKN 425 + AS + + +H K+ EA K+LQ++P A ++ L Sbjct: 330 RVDPNYASAHCNLGVTLYHQGKLSEAIAAYQKALQIDPNYVNAHC-NLGKALHTQGKLSE 388 Query: 426 NIKLYYKETESESH 439 + Y + + + Sbjct: 389 AMAAYQRALRVDPN 402 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 23/225 (10%), Positives = 63/225 (28%), Gaps = 21/225 (9%) Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 + ++ I + V E S + + + Y ++ + + A Sbjct: 128 DRDEAFLEVVKGIREAVRLVENSNSSPPKQRTKELEYQVTSLI--------NEADRLREA 179 Query: 278 MTIFD---RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDIT 334 + + + + + + L + + +A+ I Sbjct: 180 KKLEEAVVKYKAALSLDPNSVYAHNALGVVLHT---------QGKLSEAIAAYQKALQID 230 Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 +G G+ + +++A + A + + K+ EA Sbjct: 231 PNYVNAHCNLGKALHTQGKLSEAMAAYQRALRLDPNDADTHCNLGIALHDQGKLSEAIAA 290 Query: 395 IDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 K+LQ++P A ++ L + Y + + + Sbjct: 291 YQKALQIDPNYVNAHC-NLGKALHTQGKLSEAMAAYQRALRVDPN 334 >UniRef50_Q01PY1 Serine/threonine protein kinase with TPR repeats n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01PY1_SOLUE Length = 841 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/329 (9%), Positives = 90/329 (27%), Gaps = 19/329 (5%) Query: 107 KTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISN------KKIDGLYTYPMAA 160 ++ + + + PF + L ++++ G++ P + Sbjct: 310 WKRLPGAAPRNRQVVVLPFENVGRQPEQAAFCDGLTEVVTALLSRPGAAPAGMWVLPSSD 369 Query: 161 TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAV--NTLYIELIDAKNLFLIASNHLPVDE 218 + + D + G + + + L DA L+ S + + + Sbjct: 370 VRRFGVQ-TVSGAGRTLHADLAIGGTAQRAADSAGWVITVNLSDAAQPHLLGSRTIRLSD 428 Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES-IYRA 277 + + + +A + L + + RA Sbjct: 429 SEAGDLEPRLAAALLPLLDAPAPARDSRRPAPAAYPR---FVAARGYLRQYDRGDNLSRA 485 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + + + + L E + + KA + + ++I + Sbjct: 486 TSELEVITAAT---PDFAPAQVALGEAYYRQY--SGTRKAEWLAKADQAVRRAAEINENE 540 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 + ++G I +GQ + + A + A H + EA + Sbjct: 541 PGVHLMLGRILRATGQNDAAIRELQGAIAADPGDVAALLQLAGAHEGAGQFAEAEAAYQQ 600 Query: 398 SLQLEPRRRKAVVIKECVDMYVPNPLKNN 426 ++++ P +A + + + Sbjct: 601 AIRIRPSYYQAHM-NLGIFYMNQGKYQAA 628 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 17/178 (9%), Positives = 44/178 (24%), Gaps = 22/178 (12%) Query: 271 PESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYV 330 +++ A +F R +++ Y L + A+ Sbjct: 656 RDNLKEAERLFSR---SIELKPT-AGAYANRCGVEFDL---------HDMEGAVTDCRKA 702 Query: 331 SDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI-------HSTDIASLYYYRALVHF 383 D+ + SG+ + ++ A + L A Sbjct: 703 VDLQPTSPIAWGNLADALAASGKRVQAVETYQTALETGNKMLAINPSNPELLGSMAKFAA 762 Query: 384 HNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 ++ + A +++ P V+ + +L + + R Sbjct: 763 KTDQKKLALDLAARAI--SPSASFRVLYNAGKAYGLCGECGRAAELLRRAFDKGYPRP 818 >UniRef50_A5ED47 Transcriptional regulator n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5ED47_BRASB Length = 972 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 50/368 (13%), Positives = 111/368 (30%), Gaps = 24/368 (6%) Query: 3 LENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK 62 L K + E + L V + + ++ VL++S G +V KD ++ VW Sbjct: 25 LGGKVVFATGEWEIDLDRRELRARGGPVPLGGRAFEIMEVLIKSEGKLVTKDELLSQVWP 84 Query: 63 NIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 V + +L I +LR ++TI +GYR G + Sbjct: 85 GATVEENTLQVHISALRKALGPD--REMLKTISGRGYRLLGTWAPRASGAVLRTSPVHFH 142 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 + T P ++ + + + + + L + + ++ + + + Sbjct: 143 AVSGATFQTNLPEATSELIGRDAAGQHLRNLL------STYRVVTLTGPGGIGKTRLALE 196 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVR 242 V + + + +EL + L+ S L I Q + + Sbjct: 197 VARSLVPDFHGDRFLVELASLSDPALLPSAVAGAMGLRLGEDAASHTIAQITGGKKLLLV 256 Query: 243 LAKQDQGYKNHYL----------SDEMLAGKKELYDFTPESIYRAMTI----FDRLQNKS 288 L + + +LA +E+ E +YR + ++ K Sbjct: 257 LDNCEHVIEAAARFAETIVRLCPHVSILATSREVLRIDGEYVYRVPPLDVPPENQADPKR 316 Query: 289 DIQTLKTECYCLLAECHMSLALHGKSELEL--AAQKALELLDYVSDITTVDGKILAIMGL 346 + + A + L + A + L+ + + L + + Sbjct: 317 VLDHSAARLFVSRAMASQADFLPDGENISAISAICRRLDGIPLAIEFAAARAATLGLRHV 376 Query: 347 ITGLSGQA 354 L + Sbjct: 377 AARLDDRF 384 >UniRef50_C9Q7M5 Transcriptional regulator CadC n=2 Tax=Vibrio RepID=C9Q7M5_9VIBR Length = 474 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 60/404 (14%), Positives = 129/404 (31%), Gaps = 60/404 (14%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKN 63 + H + + L + ++ + VL++L ESA K+ ++E+VW+ Sbjct: 12 QRNPISHLADWYVEHQSRTLRNAHTTLHFDTTQFAVLMLLAESAPEAASKEALLENVWRG 71 Query: 64 IIVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 +V+++S+ I LR +F + I T GYR+ +V + + + Sbjct: 72 KVVTEDSIYVVINGLRRVFSDNARQPKYIATENGVGYRWIAEVRRERSQQVKRWR----- 126 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 L + +S+ + GL+ + + + +Y Sbjct: 127 --------------LAAGIS-GLSSLALIGLFWLSRPVV----SPLPATALEHFQRANYL 167 Query: 183 VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVR 242 +T ++ +Y LID F + + ++ I + + R Sbjct: 168 MTQPAQYHDEAIEIYQSLIDQYPSF--------AESYVKLAAAMMSTIFNSDVRVVEKKR 219 Query: 243 LAKQDQGYKNHYLSDEMLAG--KKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 +Q + A LY +A F++ Q Sbjct: 220 WIEQQLLHALELDPTHREAHKLLGNLYFLVFHQHDKARKHFEQAQ--------------G 265 Query: 301 LAECH--MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI--MGLITGLSGQAKV 356 LA+ H S L E E A ++ + + + I ++G Sbjct: 266 LADAHYFYSQFLLAMGEFEAAHRELERYIAL-------HPQGYSSEGAAWIYTMAGNYSR 318 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + + E+ K STD + + + + A + + ++ Sbjct: 319 ARLELEKLKEFSTDSYYYLVSQQAIAELSGDDKTAFAFLMQLIE 362 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 27/198 (13%), Positives = 58/198 (29%), Gaps = 11/198 (5%) Query: 243 LAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLA 302 L++ + + A+ I+ L D E Y LA Sbjct: 145 LSRPVVSPLPATALEHFQRANYLMTQPAQYH-DEAIEIYQSL---IDQYPSFAESYVKLA 200 Query: 303 ECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGL-SGQAKVSHILF 361 MS + + + + L + ++ + ++G + L Q + F Sbjct: 201 AAMMSTIFNSDVRVVEKKRWIEQQLLHALELDPTHREAHKLLGNLYFLVFHQHDKARKHF 260 Query: 362 EQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPN 421 EQA+ A +Y+ + + E A +++ + L P+ + + Sbjct: 261 EQAQGL----ADAHYFYSQFLLAMGEFEAAHRELERYIALHPQGYS-SEGAAWI-YTMAG 314 Query: 422 PLKNNIKLYYKETESESH 439 K E + Sbjct: 315 NYSRARLELEKLKEFSTD 332 >UniRef50_C5SI97 Putative uncharacterized protein n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SI97_9CAUL Length = 447 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 55/171 (32%), Gaps = 4/171 (2%) Query: 248 QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS 307 + N L+ + + TP+S+ RA T+ ++ + + LA+ ++ Sbjct: 122 RLPSNPVLAQTYMEARDSWATRTPQSLERAETLL---LEVTNKEPQFAPAWASLADVYLL 178 Query: 308 LALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI-TGLSGQAKVSHILFEQAKI 366 G + + A +A + +G + + + F +A Sbjct: 179 RREFGGLDDKTAFTRAEAAAVKAKQLDPSLAAAHRAIGFVQYWWHDDPRSAGTSFRRALK 238 Query: 367 HSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDM 417 S +++ + N + EA + K+ LEP R Sbjct: 239 LSPQDPQTHFWFGTLLSDNGQHVEALRELKKARLLEPGSRAIQTEMAWAQW 289 >UniRef50_P23890 Transcriptional activator cadC n=99 Tax=Enterobacteriaceae RepID=CADC_ECOLI Length = 512 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 48/447 (10%), Positives = 121/447 (27%), Gaps = 60/447 (13%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 E L +++ Q+ + + + +L+ + +G V+ +D +I++VWK IV++ Sbjct: 7 RVGEWLVTPSINQISRNGRQLTLEPRLIDLLVFFAQHSGEVLSRDELIDNVWKRSIVTNH 66 Query: 70 SLTRCIYSLRCIFEKIGYDR--CIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +T+ I LR + D I T+ ++GY+ V + + + P Sbjct: 67 VVTQSISELRKSLKDNDEDSPVYIATVPKRGYKLMVPVIWY---SEEEGEEIMLSSPPPI 123 Query: 128 SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 + L + + T F S + Sbjct: 124 PEAVPATDSPSHSLNIQNTATPPEQSPVKSKRFTTFWVWFFFLLSLG--ICVALVAFSSL 181 Query: 188 --NQNNAVNTLYIELIDAKNLFL-----IASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 + + + + D + S+ + + ++ Sbjct: 182 DTRLPMSKSRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSTFMVHD 241 Query: 241 V------RLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRL-------QNK 287 + + +++ ++ T+ D+ Q Sbjct: 242 KINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITNGNQLA 301 Query: 288 SDIQ--------------------TLKTECYCLLAECHMSLAL-HGKSELELAAQKALEL 326 K + + A + + + +A EL Sbjct: 302 IQNDLLESLSKALNQPWPQRMQETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASEL 361 Query: 327 LDYVSDITTVDGKILAIMGLITGLSGQA----KVSHILFEQAK-------IHSTDIASLY 375 L + + A L+ + + + +++ +Y Sbjct: 362 LGEIVQSSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN-NLSIIY 420 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLE 402 +A+ K +E+ I+ + LE Sbjct: 421 QIKAVSALVKGKTDESYQAINTGIDLE 447 Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 24/225 (10%), Positives = 58/225 (25%), Gaps = 10/225 (4%) Query: 196 LYIELIDAKNLFLIASNHLPVDEL--HNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNH 253 + I+L+D + + + +++++ + +++P + + Sbjct: 274 MSIKLVDNADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQKILPHR 333 Query: 254 -YLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHG 312 L L +S+ RA + + T A + Sbjct: 334 GALLTNFYQAHDYLLHGDDKSLNRASELLGEI---VQSSPEFTYARAEKALVDIVRHSQH 390 Query: 313 KSELELAAQKALELLDYVSDI--TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTD 370 + E +D + + I I + + G+ S+ Sbjct: 391 PLD-EKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE-M 448 Query: 371 IASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECV 415 Y V+ EA + L P I+ + Sbjct: 449 SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGI 493 >UniRef50_B8ESY3 Transcriptional regulator, winged helix family n=1 Tax=Methylocella silvestris BL2 RepID=B8ESY3_METSB Length = 956 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 53/418 (12%), Positives = 117/418 (27%), Gaps = 62/418 (14%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F + +L++ V I + L +LI L+E AG VV +++ VW IV + + Sbjct: 15 FGPYRLSASERLLSRDGAPVAISGRALDILIALIERAGEVVSVQELLDRVWPQTIVEEPN 74 Query: 71 LTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 L I +LR + R + + R+GY +++ D ++ + Sbjct: 75 LRVHIATLRRVLGNDSQGSRYVINVPRRGYSIVTPLYRLAREGAVAIDATVISERQPSLP 134 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 L +I V +S + + + I Sbjct: 135 TPLQSMIGRSGTVAELSVQILSKRFI----------SVIGPGGIGKTTVAVAVAHAVRQH 184 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPV---------------------------DELHNT 222 + +++L + +AS D + Sbjct: 185 FGDDSVFFVDLSSIADKEDVASAVAAAIGCSVPGVDPEPFILAFLANKHFLIVFDGCEHV 244 Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR----AM 278 + + V LA + + +L+ + TP + A+ Sbjct: 245 IEAAAPLAARLVGGAPSGRFLATSREALRIEGEEAYLLSALEGPAKDTPSADEAIASPAI 304 Query: 279 TIF-DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 +F +R + + + + + L+ + ++ Sbjct: 305 QLFMERATSAG----------------YSIELSDSDAPIVADICRRLDGIPLAIELAASR 348 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICI 395 + I+G L A + A + +L + E+ +C+ Sbjct: 349 VGVYGILGTADLLDHDAALQLQGLRSA---APRHRTLQAMLDWSFRLLSRDEQQILCM 403 >UniRef50_Q12S47 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12S47_SHEDO Length = 762 Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats. Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 1/109 (0%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y +TQ N+ I K L VL L E+ G VV D ++E+VW+ +VS Sbjct: 4 QYSIGGFFIDLSRNQITQNNQSQIIAPKALAVLTYLAENQGKVVSHDALLENVWQGTVVS 63 Query: 68 DESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNT 115 +L R I LR G I+T ++GY V E Sbjct: 64 PNTLQRSIAQLRKALGDDGKVQVYIKTHAKQGYSLECDVRWHDNIESPP 112 >UniRef50_B3PWN4 Hypothetical conserved protein n=2 Tax=Rhizobium etli RepID=B3PWN4_RHIE6 Length = 607 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 39/344 (11%), Positives = 98/344 (28%), Gaps = 19/344 (5%) Query: 115 TSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFL 174 + +I + F + + +++ + I K + + A + Sbjct: 211 ENRPTILVERFESVSDGGLASDISRGITDDIIEKLVRFNDIVVVTAMPRIKTGQVSSE-- 268 Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVD----ELHNTSQFIIDNI 230 P Y + G + + L+ + +I +++ D + T + +I Sbjct: 269 ----PLYALQGSVRLEGSQLRSTARLVRRVDAAVIWASNYDADMKVQGIPKTQASLAGDI 324 Query: 231 LQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDI 290 V +P + N +L+ + T ++ A + R ++ Sbjct: 325 AAAVARPFGVMFQTDTAAIAGNADAFSCVLSYYSYRSEMTVQAHEAAKSCLQRAVEEAPA 384 Query: 291 QTLKTECYCLLAECHMS----LALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGL 346 + LL+ H+ A +L + + + L + L Sbjct: 385 DSNVA---ALLSLIHLDEFRFSYQLHTKSTAATLGIAKDLAVRAVQLDPKNARALQALML 441 Query: 347 ITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE--PR 404 + A + + + L + + ++ I +++ PR Sbjct: 442 ADFFGNDPAEALRAGAAAYASNPNDTEVAGEYGLRLSMSGEWDKGCTLISEAVGKNAGPR 501 Query: 405 RRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 V + C M + HR+++ +IL Sbjct: 502 GYYQVGMALCAFMRGDTQAAELWSRMSDLNYNPMHRLVLLSILG 545 >UniRef50_Q1IIZ5 Transcriptional regulatory protein-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IIZ5_ACIBL Length = 717 Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 2/173 (1%) Query: 6 KFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNII 65 K S+H + + + + N ++ K + VL+ L + V+ K+ +I +VW + Sbjct: 2 KGSFHIADWEVEPQINQVRRQNHSFHLEPKVMQVLVELAAHSDEVLSKEHLIHAVWSDTF 61 Query: 66 VSDESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFP 124 VSD+ LTRCI +R + + + I+TI + GYR V K + + Sbjct: 62 VSDDVLTRCISEIRRVLDDDARAPKIIQTIPKSGYRLIAPVVFDKAAPPKNGSSNGSTAT 121 Query: 125 FTTSLNTLDPLILNQELVQIISNKKID-GLYTYPMAATNFCNDHISQNSFLSR 176 + PL + + ++ + G+ + Sbjct: 122 VEAATVETPPLKTAETPRKNLAPWIVAVGVLAIAVVYFAIRATRPPVAQPGPE 174 >UniRef50_A5CFS7 Putative transcriptional regulator n=1 Tax=uncultured marine microorganism RepID=A5CFS7_9ZZZZ Length = 443 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 38/282 (13%), Positives = 87/282 (30%), Gaps = 10/282 (3%) Query: 164 CNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLP--VDELHN 221 +D + R V G + + A + E+I A + F I ++ +++ Sbjct: 7 WSDDTTAQQLAKRLGVKALVNGSLRTDGAKIRITAEIISA-DGFQIWTDKFDRAAEDIFQ 65 Query: 222 TSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIF 281 + + + + + + N G L ES+ A +F Sbjct: 66 LQEIVATEVRKVLLG--EPGEQIRAAGREPNPEAFTTYTRGLFFLEKRDIESLQSAADLF 123 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV-DGKI 340 + Y LA ++ LA + + Q+A+E+ + Sbjct: 124 ---RETIKHDRDFGPAYLRLAITYLLLADYTVEQRRHLFQQAIEIANQGVKADPGIRAPA 180 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 I G + G + F A T + Y + + + ++++ +L Sbjct: 181 AMIHGFVEHQFGNWAAASDAFAIALGGVTVYPTAYNWHSRLLSALGLLDKSLQQAKVALA 240 Query: 401 LEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVI 442 EP + + + + + + N + + + E I Sbjct: 241 KEPAS-QVLNARMASAYFWIDDMANARLFFEEANKMEVGAPI 281 >UniRef50_C5BKV6 Tetratricopeptide repeat domain protein n=2 Tax=Teredinibacter turnerae T7901 RepID=C5BKV6_TERTT Length = 733 Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats. Identities = 45/366 (12%), Positives = 94/366 (25%), Gaps = 17/366 (4%) Query: 94 IYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGL 153 I R+ G + F + D + Q++SN + + Sbjct: 182 INRRVKEKLGAYRYPIAASIFMLIAAGIYFVPRWLVPGYDANYVEIADFQMLSNDQNNNS 241 Query: 154 YTYPMAATNFCNDHISQNS-----FLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFL 208 Y + + +TG + + + ++ Sbjct: 242 YLSSGISDAVRAQLADMKDLYVLKAGEGVQAPIVLTGSVQRFGDNLRVSYQIKRRDGDVQ 301 Query: 209 IASNHLPV--DELHNTSQFIIDNILQTVHKP--ERSVRLAKQDQGYKNHYLSDEMLAGKK 264 I L +E+ ++ I + + + R A+ D + + + G Sbjct: 302 ITGGKLDGKYNEIFILQDRLVGEIAKYLADEFAIPNFRPARLD-TTSDILAYEYYMRGMD 360 Query: 265 ELYD-FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKA 323 L +T + A+ F + L E + + G A Sbjct: 361 YLSRPYTQSNNDEAIKYFT---TALVHDNQYVDAEAALCEAYKTKY--GNLGDVSWFNSA 415 Query: 324 LELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHF 383 + + + + M I SG+ + L +Q D AL + Sbjct: 416 KQHCELALKLDPTHTGAIRTMAEIHRQSGEYDQAIQLIDQVLAREPDNTPAARLLALTYH 475 Query: 384 HNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVII 443 + + ++ +Q P+ L+ I Y K E Sbjct: 476 DKNESAKGVRILEDCIQRHPKDF-VNYKDLARIYLDNGNLEKAITNYKKVLEITPQNNAA 534 Query: 444 DNILKL 449 N L + Sbjct: 535 LNNLGI 540 Score = 63.6 bits (153), Expect = 2e-08, Method: Composition-based stats. Identities = 28/212 (13%), Positives = 59/212 (27%), Gaps = 30/212 (14%) Query: 247 DQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + K + E++ + E +A+ + D++ + T LLA + Sbjct: 420 ELALKLDPTHTGAIRTMAEIHRQSGE-YDQAIQLIDQV---LAREPDNTPAARLLALTYH 475 Query: 307 SL-------------------ALHGKSELEL------AAQKALELLDYVSDITTVDGKIL 341 +L +KA+ V +IT + L Sbjct: 476 DKNESAKGVRILEDCIQRHPKDFVNYKDLARIYLDNGNLEKAITNYKKVLEITPQNNAAL 535 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 +G+ G+ K + FE A + Y +++ ++A +L + Sbjct: 536 NNLGISYYFLGELKQARKYFELATRLIQGL-DAYSNLGSLNYFLGDYDKAAEQFKIALAM 594 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 P + + Y K Sbjct: 595 SPTNALLQLNYADSLRNTNGKSGLAEESYNKA 626 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 42/162 (25%), Gaps = 19/162 (11%) Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 +I L + L ++A + + + + + +G + Sbjct: 525 LEITPQNNAALNNLGISYYFLG---------ELKQARKYFELATRLIQGL-DAYSNLGSL 574 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFH-NEKIEEARICIDKSLQL----- 401 G + F+ A S A L A + N K A +K++ L Sbjct: 575 NYFLGDYDKAAEQFKIALAMSPTNALLQLNYADSLRNTNGKSGLAEESYNKAIALAEEIH 634 Query: 402 --EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 P A + + + + K + Sbjct: 635 FVNPEDNDANIT-LALSYLALHNPEQAEPYLRKAELNAPDYP 675 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 36/118 (30%), Gaps = 1/118 (0%) Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 ++ + + A+ + E + KA+ L + + + D Sbjct: 586 EQFKIALAMSPTNALLQLNYADSLRNTNGKSGL-AEESYNKAIALAEEIHFVNPEDNDAN 644 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + L + + +A++++ D + Y R EA + + L Sbjct: 645 ITLALSYLALHNPEQAEPYLRKAELNAPDYPEVIYVRLRYDIATGNFSEAFATLSELL 702 >UniRef50_Q12RS3 Transcriptional regulatory protein-like protein n=1 Tax=Shewanella denitrificans OS217 RepID=Q12RS3_SHEDO Length = 678 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 1/156 (0%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 + F T +T+ + + I K +L+ L ++ + +D +I +VW+N V Sbjct: 1 MIFVFDNIEINTALVTITRNRQALEIEPKLFSLLVYLCQNPNRAISRDELINTVWENRFV 60 Query: 67 SDESLTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPF 125 S+ ++ R I LR E + + I T+ + GYR V + Sbjct: 61 SEAAINRAIGQLRKHIEDDTSHPKYIRTVSKVGYRLDAVVQHIPQAQFQWEAKKQLSNNK 120 Query: 126 TTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAAT 161 + + I+ + L T ++ + Sbjct: 121 RNISPKAVIFVFFVLISIILVLFTVPQLDTPQLSTS 156 >UniRef50_B3PJR7 Putative Transcriptional regulator CadC n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PJR7_CELJU Length = 499 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 48/401 (11%), Positives = 115/401 (28%), Gaps = 57/401 (14%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 + L+ G+++V + + + +L++ ++ G V+ K+ I+ ++W+ +V+ Sbjct: 20 VFAIDSWRLCVHSNSLSSGDQRVELEHRLVALLLMFIDHPGEVLEKERILATIWQGKVVN 79 Query: 68 DESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFT 126 D+SL I LR R I+TI GY+F + + A Sbjct: 80 DDSLAVAISHLRKALGDNPRSPRYIKTIPGVGYQFIASAAPVEEAPATPAPVPEAA---P 136 Query: 127 TSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 + + ++ + L + + D S + G Sbjct: 137 LNPVIAERGYPHRRFPRSPGLWIPILLACLVLLTAWYARDEKKPVSSPDEL---LVLAGT 193 Query: 187 INQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRL-AK 245 + + Q + + ++L + Sbjct: 194 ----------------------------------QLASGQAEGWRQAIGSFRQVLKLQPR 219 Query: 246 QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH 305 Y + L G++ P + + D+ I + + + + Sbjct: 220 TAAAYLGIAQAKMWLLGEQLAQ---PAHCDEVIGLLDK---AIQIDSSLVDAWRERGNAY 273 Query: 306 MSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAK 365 A + + + G+ + S L + A+ Sbjct: 274 FWC--------RRDTLTAEANYQRAMALAPEGDTAPMQLAQLRLAQGRFEESLALMDLAR 325 Query: 366 IHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRR 406 H+ S+ ++ N + + A + + + EP R Sbjct: 326 QHNPLNYSV-PMVVWIYQMNRRQDLAWAELQRITRAEPDDR 365 Score = 79.0 bits (193), Expect = 4e-13, Method: Composition-based stats. Identities = 27/197 (13%), Positives = 63/197 (31%), Gaps = 8/197 (4%) Query: 244 AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 A+ ++ + +LAG + L E +A+ F ++ +Q Y +A+ Sbjct: 174 ARDEKKPVSSPDELLVLAGTQ-LASGQAEGWRQAIGSFRQV---LKLQPRTAAAYLGIAQ 229 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLIT-GLSGQAKVSHILFE 362 M L ++ + + LLD I + G + ++ Sbjct: 230 AKMWLLGEQLAQPAHC-DEVIGLLDKAIQIDSSLVDAWRERGNAYFWCRRDTLTAEANYQ 288 Query: 363 QAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNP 422 +A + + + A + + EE+ +D + Q P ++ + + Sbjct: 289 RAMALAPEGDTAPMQLAQLRLAQGRFEESLALMDLARQHNPLNYSVPMV-VWI-YQMNRR 346 Query: 423 LKNNIKLYYKETESESH 439 + T +E Sbjct: 347 QDLAWAELQRITRAEPD 363 >UniRef50_Q118Y7 TPR repeat n=4 Tax=Bacteria RepID=Q118Y7_TRIEI Length = 3145 Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats. Identities = 27/159 (16%), Positives = 49/159 (30%), Gaps = 10/159 (6%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q +I E +C L + + + A+E ++ + Sbjct: 1185 YYQQALEINPNYAEAWCNLGVILL---------KQGQIELAIEYFRKSLELNPDYAQAYN 1235 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G + G + ++QA + + A + +V +IE A KSL+L Sbjct: 1236 NLGFVFQEKGNLSKASNYYQQALEINPNYAEAWCNLGVVLRKQGQIELAIEYFRKSLELN 1295 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 P V +I Y K E E + Sbjct: 1296 P-DYAMTHNSLGVTFEEEGNFTASIASYQKALELEPNFP 1333 Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 10/167 (5%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q ++Q + + L + + KA +I + Sbjct: 1151 YYQKAINLQPDYAQAHNNLGLI---------FQEKGNLSKASNYYQQALEINPNYAEAWC 1201 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G+I GQ +++ F ++ + D A Y V + +A ++L++ Sbjct: 1202 NLGVILLKQGQIELAIEYFRKSLELNPDYAQAYNNLGFVFQEKGNLSKASNYYQQALEIN 1261 Query: 403 PRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 P +A V + ++ I+ + K E + N L + Sbjct: 1262 PNYAEAWC-NLGVVLRKQGQIELAIEYFRKSLELNPDYAMTHNSLGV 1307 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 63/244 (25%), Gaps = 32/244 (13%) Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES--IYRAMTI 280 F + ++L + +A + L L + + A+ Sbjct: 1025 QDFQVLHLLAVLENLAGRNDIA-IQLLNQVINLYPGFTEAYSNLAKLMKKEGRLEEAIAH 1083 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-------------------------E 315 + + ++ + Y L + + Sbjct: 1084 YQK---AISLEPNNSSNYSNLGFIFLEKGQIESAIINSEKSIEINPNNSQGNFNLGFAWA 1140 Query: 316 LELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 + KA ++ + +GLI G + ++QA + + A + Sbjct: 1141 EKGDLSKASTYYQKAINLQPDYAQAHNNLGLIFQEKGNLSKASNYYQQALEINPNYAEAW 1200 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 ++ +IE A KSL+L P +A L Y + E Sbjct: 1201 CNLGVILLKQGQIELAIEYFRKSLELNPDYAQA-YNNLGFVFQEKGNLSKASNYYQQALE 1259 Query: 436 SESH 439 + Sbjct: 1260 INPN 1263 Score = 96.3 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 40/129 (31%), Gaps = 9/129 (6%) Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 + + ++ + Y L + + KA +I + Sbjct: 1216 AIEYFRKSLELNPDYAQAYNNLGFV---------FQEKGNLSKASNYYQQALEINPNYAE 1266 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 +G++ GQ +++ F ++ + D A + + + K+L Sbjct: 1267 AWCNLGVVLRKQGQIELAIEYFRKSLELNPDYAMTHNSLGVTFEEEGNFTASIASYQKAL 1326 Query: 400 QLEPRRRKA 408 +LEP + Sbjct: 1327 ELEPNFPEV 1335 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 28/220 (12%), Positives = 63/220 (28%), Gaps = 21/220 (9%) Query: 223 SQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPES--IYRAMTI 280 F + N+L + +A + L+ L + + A+ Sbjct: 1676 QDFQVLNLLAVLENLAGRNDIA-IQLLNQVINLNPGFTKAYSNLAKLMKKEGRLEEAIAH 1734 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 + + +++ + Y L + A+ I I Sbjct: 1735 YQK---AIELEPNNSSNYSSLGWIFLQKGQ---------IDLAIINYKKSRKINPNSSWI 1782 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 +G + +G ++ +++A + A + + + E A KSL+ Sbjct: 1783 NINLGFVWEKNGNLPKANTYYQKAIEIHPNHAEAWCRLGNILQKQGQFELAIEYCQKSLE 1842 Query: 401 LEPRRRKAV------VIKECVDMYVPNPLKNNIKLYYKET 434 L P +A + + IK YY++ Sbjct: 1843 LNPDYIEANHSLGYIFFQLGKLAESQKYYEQAIKKYYEQA 1882 Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 39/150 (26%), Gaps = 10/150 (6%) Query: 284 LQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAI 343 Q LL C ++A+ + + Sbjct: 33 CHKIIKRQPNNFLVLELLGLCAY---------KNNQIEQAIAYYQKSLKVNYNYAETHNN 83 Query: 344 MGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEP 403 + + + Q + + A + A ++ L+ + E A KSL+++P Sbjct: 84 LAVALQDNQQIDAALRHCKIAIKLCPNYAEAWHNLGLILRDKGQFEAAIEHYQKSLEIKP 143 Query: 404 RRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 + L + K Y + Sbjct: 144 NNAEVYH-SLGTISLELGKLSESQKYYQEA 172 Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 44/117 (37%), Gaps = 1/117 (0%) Query: 316 LELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 + +A + + + D ++L ++ ++ L+G+ ++ L Q + Y Sbjct: 1656 QQNNLVEAERICRLILEEKPQDFQVLNLLAVLENLAGRNDIAIQLLNQVINLNPGFTKAY 1715 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 A + ++EEA K+++LEP + + + I Y K Sbjct: 1716 SNLAKLMKKEGRLEEAIAHYQKAIELEPNNSSNYSSLGWIFLQ-KGQIDLAIINYKK 1771 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 47/135 (34%), Gaps = 9/135 (6%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q ++ + + LA + + +A+ ++ + Sbjct: 564 YYQKAINLNPNNYKTHLGLAIV---------LKKQQKLDEAIVHNQRAIELKPNEASGWH 614 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLE 402 +G+I + G + ++++ + +YY A + + EA++ +K ++L Sbjct: 615 NLGVIFKIQGNIPEAICCYQKSLEIQPNNTYIYYSWANILKQQGNLTEAKVLYEKCIELN 674 Query: 403 PRRRKAVVIKECVDM 417 P A + + + Sbjct: 675 PNHINAHFARGFIIL 689 Score = 76.7 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 10/154 (6%) Query: 288 SDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLI 347 Q T + +LA C ++ A+ ++ + K + ++ Sbjct: 535 IQKQPNCTSAFEILALC---------AKKTDKIDLAIVYYQKAINLNPNNYKTHLGLAIV 585 Query: 348 TGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRK 407 + + + ++A + AS ++ ++ I EA C KSL+++P Sbjct: 586 LKKQQKLDEAIVHNQRAIELKPNEASGWHNLGVIFKIQGNIPEAICCYQKSLEIQPNNTY 645 Query: 408 AVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 + + L LY K E + + Sbjct: 646 IYYSWANI-LKQQGNLTEAKVLYEKCIELNPNHI 678 Score = 72.8 bits (177), Expect = 3e-11, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 43/125 (34%), Gaps = 1/125 (0%) Query: 316 LELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLY 375 + +A + + + D ++L ++ ++ L+G+ ++ L Q Y Sbjct: 1005 QQNNLVEAERICRLILEEKPQDFQVLHLLAVLENLAGRNDIAIQLLNQVINLYPGFTEAY 1064 Query: 376 YYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 A + ++EEA K++ LEP +++ I K E Sbjct: 1065 SNLAKLMKKEGRLEEAIAHYQKAISLEPNNSS-NYSNLGFIFLEKGQIESAIINSEKSIE 1123 Query: 436 SESHR 440 + Sbjct: 1124 INPNN 1128 Score = 68.6 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 34/114 (29%), Gaps = 17/114 (14%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q +I E +C L + + + A+E ++ + Sbjct: 1802 YYQKAIEIHPNHAEAWCRLG---------NILQKQGQFELAIEYCQKSLELNPDYIEANH 1852 Query: 343 IMGLITGLSGQ-------AKVSHI-LFEQAKIHSTDIASLYYYRALVHFHNEKI 388 +G I G+ + + +EQA +T+ + ++ A Sbjct: 1853 SLGYIFFQLGKLAESQKYYEQAIKKYYEQAIELNTNHVNAHFGLANALLKQGNF 1906 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 14/174 (8%), Positives = 43/174 (24%), Gaps = 16/174 (9%) Query: 258 EMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELE 317 + ++ E + + + + +L C ++ Sbjct: 2240 LLQTALEKYKAGNFEEAEQICHLI------IQDKPDVAGAFEILGLC---------AQKT 2284 Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 + + + + + + + + I ++A + A ++ Sbjct: 2285 DKTNLVITYCQKAISLNPNNEQTYLNLAIALKNQHKFNAAIIHNQKALSRKPNYAEAWHN 2344 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYY 431 + +I E+ C K+L + P A + Y Sbjct: 2345 LGQIFKGKGEITESIRCYQKALSIRPNYIDA-HFGFSLIFLKQGDFIQGFSEYE 2397 Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 12/132 (9%), Positives = 40/132 (30%), Gaps = 10/132 (7%) Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 + + + + E + L + + A+E Sbjct: 89 QDNQQIDAALRHCKIAIKLCPNYAEAWHNLGLILR---------DKGQFEAAIEHYQKSL 139 Query: 332 DITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 +I + ++ +G I+ G+ S +++A + + ++ A V + + Sbjct: 140 EIKPNNAEVYHSLGTISLELGKLSESQKYYQEALKLDKNYLNAHFGLAAVLLKQGSLMQG 199 Query: 392 RICID-KSLQLE 402 + + + + Sbjct: 200 FSEYEWRCKRQD 211 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 49/126 (38%), Gaps = 1/126 (0%) Query: 318 LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYY 377 ++A E+ ++ I+ L + + ++ + +++A + + + Sbjct: 522 ENWKEAEEICHFIIQKQPNCTSAFEILALCAKKTDKIDLAIVYYQKAINLNPNNYKTHLG 581 Query: 378 RALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESE 437 A+V +K++EA + ++++L+P V + + I Y K E + Sbjct: 582 LAIVLKKQQKLDEAIVHNQRAIELKPNEAS-GWHNLGVIFKIQGNIPEAICCYQKSLEIQ 640 Query: 438 SHRVII 443 + I Sbjct: 641 PNNTYI 646 Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 45/112 (40%), Gaps = 1/112 (0%) Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 + + +L ++GL + Q + + ++++ + + A + A+ N++I Sbjct: 35 KIIKRQPNNFLVLELLGLCAYKNNQIEQAIAYYQKSLKVNYNYAETHNNLAVALQDNQQI 94 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 + A +++L P +A + + + I+ Y K E + + Sbjct: 95 DAALRHCKIAIKLCPNYAEA-WHNLGLILRDKGQFEAAIEHYQKSLEIKPNN 145 Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats. Identities = 15/158 (9%), Positives = 42/158 (26%), Gaps = 18/158 (11%) Query: 283 RLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILA 342 Q + + Y LA + A+ + Sbjct: 2293 YCQKAISLNPNNEQTYLNLAIALKNQHKFN---------AAIIHNQKALSRKPNYAEAWH 2343 Query: 343 IMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID-KSLQL 401 +G I G+ S +++A + ++ +L+ + + + + Sbjct: 2344 NLGQIFKGKGEITESIRCYQKALSIRPNYIDAHFGFSLIFLKQGDFIQGFSEYEWRCKRQ 2403 Query: 402 E--------PRRRKAVVIKECVDMYVPNPLKNNIKLYY 431 + P + + + +Y L ++I+ Sbjct: 2404 DYETRSFGQPVWDGSNFPGKTLFIYTEQGLGDSIQFIR 2441 Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 10/125 (8%), Positives = 37/125 (29%), Gaps = 10/125 (8%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q +++ + + L +++ +A+ +I + Sbjct: 594 EAIVHNQRAIELKPNEASGWHNLGVI---------FKIQGNIPEAICCYQKSLEIQPNNT 644 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID-K 397 I I G + +L+E+ + + + ++ R + + + + Sbjct: 645 YIYYSWANILKQQGNLTEAKVLYEKCIELNPNHINAHFARGFIILKQGDLLVGFSEYEWR 704 Query: 398 SLQLE 402 + + Sbjct: 705 CQRQD 709 Score = 50.5 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 2/106 (1%) Query: 335 TVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARIC 394 + + + A++ + + A Sbjct: 1642 PDLP-ANFENAYQYYQQNNLVEAERICRLILEEKPQDFQVLNLLAVLENLAGRNDIAIQL 1700 Query: 395 IDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHR 440 +++ + L P KA M L+ I Y K E E + Sbjct: 1701 LNQVINLNPGFTKA-YSNLAKLMKKEGRLEEAIAHYQKAIELEPNN 1745 Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 1/114 (0%) Query: 320 AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRA 379 ++A ++ + I+GL + + + ++A + + Y A Sbjct: 2253 FEEAEQICHLIIQDKPDVAGAFEILGLCAQKTDKTNLVITYCQKAISLNPNNEQTYLNLA 2312 Query: 380 LVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 + + K A I K+L +P +A + +I+ Y K Sbjct: 2313 IALKNQHKFNAAIIHNQKALSRKPNYAEA-WHNLGQIFKGKGEITESIRCYQKA 2365 >UniRef50_C5B7S6 Transcriptional activator CadC n=2 Tax=Enterobacteriaceae RepID=C5B7S6_EDWI9 Length = 548 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 4/193 (2%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + ++ E L L D +T+ + + + + +L V+ +D +I++VWK Sbjct: 2 QEQTFRVGEWLVLAADNKITREGRVLVLEPRLIDMLSYFAHHPDMVLSRDELIDNVWKRN 61 Query: 65 IVSDESLTRCIYSLRCIFEK--IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAI 122 IV++ +T+CI LR + I T+ ++GY+ V ++ Sbjct: 62 IVTNHVVTQCISELRKYLKDGRPEAPEYIVTVPKRGYKLVESVIWCGEESLEQLVAAVLP 121 Query: 123 FPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYF 182 + + + + + + G T P A+T + + P Sbjct: 122 AETPSFPAAAEAVTPSGSASPAFAAE--SGAVTPPPASTPLLMAQPASSCDTPVMPPTSA 179 Query: 183 VTGRINQNNAVNT 195 +T Sbjct: 180 LTADAAPTPRRLR 192 >UniRef50_Q1M6Q3 Putative adenylate cyclase/transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1M6Q3_RHIL3 Length = 955 Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats. Identities = 58/372 (15%), Positives = 113/372 (30%), Gaps = 29/372 (7%) Query: 10 HFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDE 69 F E +L + E V + + L +LI L E G +V KD +I W N IV + Sbjct: 18 SFGEFRLYPGRHLLVKDQEPVAVGSRALEILIALTERPGELVTKDELISRAWPNTIVEES 77 Query: 70 SLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +L I LR R I + +GYRF + ++++ + + P + Sbjct: 78 NLRAQIAVLRKALGEDQSAARYIAAVPSRGYRFIAPLSRSEVKIHPVEEAAPNNLPKQLT 137 Query: 129 LNTLDPLILN--QELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGR 186 + + +Q + G S + + Sbjct: 138 RPIGREEAIGILEGRIQRFRLVTVVGPGGIGKTTVGVRVAEE--LSSSYQHGVCFVDLAP 195 Query: 187 INQNNAVNTLYIELID----AKNLFLIASNHLPVDELHNTSQ------FIIDNILQTVHK 236 ++ +++ ++ L+ + + S HL + + +T+ + Sbjct: 196 LSHPSSLPSVLASLLRLPEITGDPISLVSAHLRDKHMLLVFDNCELVLDAAARLAETLLR 255 Query: 237 P---------ERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNK 287 R + + Y+ L L D + A+ +F Sbjct: 256 EAPGISVLATSREALRVEGESVYRLPPLDMPPLGAGLTAAD---ALAFPAIRLFVDRATS 312 Query: 288 SDIQTLKTECYCLLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGL 346 S + + + H+ L G + +ELAA + D L G Sbjct: 313 SGSEYAFDDDEAPIV-THICRQLDGIALAIELAAGRVEAFGTRGIAELLNDRLRLLTGGR 371 Query: 347 ITGLSGQAKVSH 358 T L ++ Sbjct: 372 RTALPRHQTLAA 383 >UniRef50_Q89GS8 Transcriptional regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89GS8_BRAJA Length = 947 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 62/410 (15%), Positives = 128/410 (31%), Gaps = 45/410 (10%) Query: 5 NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNI 64 + F L + +L + +++ + L +LI L E AG VV K +I+ VW + Sbjct: 7 QDSTIAFGPFRLLAKSRLLEKDGAPLHLGGRALDILIFLAERAGEVVDKRELIKRVWSGV 66 Query: 65 IVSDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIF 123 V + SL I +LR G R + + +GY F+ + +E TS + Sbjct: 67 TVDEGSLRFHITTLRKALGDAGEGARYVVNVPGRGYCFTAPLLHPAPSESRTSPPVSSPH 126 Query: 124 PFTTSLNTLDPLILN-QELVQIISNKKI-------------DGLYTYPMAATNFCNDHIS 169 + L + +++ ++ + L T F +S Sbjct: 127 ALPSPLARMIGRGEAVEKISAELALHRFVTIVGPGGIGKTSVALAVAHGELTAFDG-QVS 185 Query: 170 QNSFLSRFKPDYF-------VTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNT 222 F + + +N ++ + L L + L + S +DEL Sbjct: 186 FVDFGALTDARLVPGTIAATLGLTVNSDDPMPGLLAFLRSRRTLLVFDSCEHILDELAPV 245 Query: 223 SQFIIDNILQT-VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIF 281 ++ ++ + + R ++ ++ ++ L + D Y A +F Sbjct: 246 AERLVQEAPELHILATSRESFRSEGERVHRLFPLDCPPERDGLGIADILA---YPASRLF 302 Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 +S + +E L + L+ + ++ Sbjct: 303 VERIAESLSEFELSEEDAPLV---------------AEICRRLDGIALAIELAAGRVNAY 347 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEA 391 I G + L + + A +L A + E A Sbjct: 348 GIAGTASLLDSRFSLLWRGRRSAI---PRHQTLSAALAWSYDLLPAAESA 394 Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 22/197 (11%), Positives = 51/197 (25%), Gaps = 16/197 (8%) Query: 218 ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 L + + S RL GY + ++ L + P+ A Sbjct: 661 HLIGNQDKAVQFCESAMVHNPGSQRLNIGHLGYDDRIVALVAL-ARGLWLTGRPDRAVEA 719 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 R + ++ L + + E ++ ++ + Sbjct: 720 ARYTVREAELLEQPLTLGISLIW--TIYVFLWVGDWASAESLIERLIDHSARHF-LGPYH 776 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKI---------HSTDIASLYYYRALVHFHNEKI 388 + G + G +++ +T A+ A + Sbjct: 777 AVGIGQKGELLLRRGDVAGGIEHLRRSQATLYATRHRIMTTVFATA---LAEGLVAQNQP 833 Query: 389 EEARICIDKSLQLEPRR 405 +EA ID+++ P Sbjct: 834 DEALRTIDEAIAQIPEH 850 >UniRef50_Q89ML1 Blr4182 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89ML1_BRAJA Length = 944 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 51/393 (12%), Positives = 112/393 (28%), Gaps = 22/393 (5%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F L + +V I + +LI L E AG +V K ++ SVW++++V + Sbjct: 17 FGRFQLDKRRRQLLKDGVEVRIGSRGFDILIALTERAGELVSKRDLLFSVWRDVVVDEAV 76 Query: 71 LTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 L + SLR + R I T+ +GY F + + + N +S Y Sbjct: 77 LRVHVASLRRALGEGQDGARYIVTVSGRGYSFVAPIERKRGNGLASSGYVPPPRHGRQFP 136 Query: 130 NTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQ 189 + + E+V + + + + + + R + ++ G + Sbjct: 137 SIPRLFVGRDEVVDDLCTLIVKQRFV-SVVGAGGIGKTTVAGAIIRRLQAEFGDEGAVFV 195 Query: 190 NNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG 249 + L+ L + + L F+ + V + A Sbjct: 196 DLGAVD-EPGLVAGAVLSAVGCPLGGAEPLAELLGFVAGKRILIVLDSCEHLLDAASHLA 254 Query: 250 YKNHYLSDEMLAGKKELYDFTPESIYRAM--TIFDRLQNKSDIQTLKTECYC-------- 299 + + +G L + L D + Sbjct: 255 SQLFQCT----SGVCLLVTSREALNVEGEIVHLLSPLACPIDDVPSAADAMATPAVRLFM 310 Query: 300 -LLAECHMSLALHGKS-ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 + AL+ + + + + ++ + G+ L+ ++S Sbjct: 311 DRASSAGFEGALNDADAPVVSEICRRTDGIALAIELVASRVGTYGLRGVAGLLASHMELS 370 Query: 358 HILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 A +L + E+ Sbjct: 371 LTGQRNAV---PRHRTLQAMLDWSFRLLAESEQ 400 Score = 48.2 bits (113), Expect = 7e-04, Method: Composition-based stats. Identities = 27/239 (11%), Positives = 76/239 (31%), Gaps = 15/239 (6%) Query: 175 SRFKPDYFVTGRINQNNAVNTLYIELIDA-KNLFLIASNHLPVDELHNTSQFIIDN--IL 231 +R + Y V+ ++ + + + L + F+ Sbjct: 572 ARLQEAYAVS-SLHTLGNTTEVQAAIRRGLALHEASEEALPQLRLLAGLNLFLTRLGDFE 630 Query: 232 QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQ 291 + R +A+ + +++ MLA L ++ F+ + + Sbjct: 631 GALAAATRCRTVAELSGSLSDRIIAEWMLAAACHLAGDQVAAVAHCKCGFELETSIGRLD 690 Query: 292 TL-KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV----DGKILAIMGL 346 + L AE ++ +L + A ++ALE ++ + + + ++ L Sbjct: 691 INLFGYDHRLRAEIALARSLWLLGSRKQARKQALEAMNEAARLAPAANYCMAVVHSVPAL 750 Query: 347 ITG-----LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQ 400 + ++ + L E+ A+ R F + + + + ++L+ Sbjct: 751 LWSGNTGDVADHVDRAISLAEK-HSLRGHAAAAQALRGEWLFMSGRPADGVEALRQALR 808 >UniRef50_Q1ZPR1 Transcriptional activator CadC n=1 Tax=Photobacterium angustum S14 RepID=Q1ZPR1_PHOAS Length = 481 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 56/111 (50%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 ++ + L +T + L + + + + +L L ++ G V +D +I+ VW +V Sbjct: 4 RNFKINDCLLITTENSLKKSGKTYILEPRITKLLSFLAQNQGIVFTRDELIDEVWDGAVV 63 Query: 67 SDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSD 117 SD+ +T+ I+ LR I +K+ D I TI ++GY+ V + I+ + Sbjct: 64 SDQVVTQSIFELRKILKKLDEDHWIITIPKRGYKLDADVQQIYIDPNTGFK 114 >UniRef50_Q2S7R1 DNA-binding winged-HTH domains n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2S7R1_HAHCH Length = 706 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 66/457 (14%), Positives = 129/457 (28%), Gaps = 52/457 (11%) Query: 12 LEGLTLTEDGILTQGNEQVY-IPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 L + + + + V+ + K VL +L+ VV + + VW+ V + Sbjct: 34 GVWLFNPRNQTIARADGLVHQVRAKTCDVLALLIRHHDRVVTTEEFFDQVWEGRFVGENV 93 Query: 71 LTRCIYSLRCIFEKIGYDRCIETIYRKGYRFS--------------------GQVFKTKI 110 L R I+ LR IFE I T ++GYR + Sbjct: 94 LKRSIFELRHIFED-KSRDYIATAPKRGYRLKAAVALVRPDPPEPETMTPPASAEAEQAP 152 Query: 111 NEDNTSDYSIAIFPFTTSLNTLDPLILNQE----LVQIISNKKIDGLYTYPMAATNFCND 166 ++ S +A P + + LD L + I + L ND Sbjct: 153 SDVTVSPAPVATIPTASWYSRLDLKRLAVGGFFLFLLIWGMTQKQALRQAQEDNLQLQND 212 Query: 167 HISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFI 226 N F+ Y TG +++ L E L + L Sbjct: 213 SAQMNRFMLDMLARYKTTGSRHESALKAMLDEERPRIDQRKLSPAERLRQLRFLAACYLA 272 Query: 227 IDNILQTVHKPERSVRLAK------QDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 + ++SVR+ + ++ + + E L E + A Sbjct: 273 GGHYADARMVLDQSVRMGEEIHGQDAEEVIRIKFALVETLVAMNE----RQAAYDTARYT 328 Query: 281 FDRLQNKSDIQTL-KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI------ 333 D ++ + Y +A + + A + + + Sbjct: 329 LDLIRTAREADKELLAHGYYWMAMAQLECIYP-YCDRPKALASGKQNAEAAMALFSESLG 387 Query: 334 --TTVDGKILAIMG-LITGLSGQAKVSHILFE--QAK--IHSTDIASLYYYRALVHF-HN 385 T G L ++ +T + + ++S + QA A+ Y + Sbjct: 388 ADATETGDALWLLNWFVTDSARKVEISRRALDIYQANLGELDEKTAAAYAELSRTLATWG 447 Query: 386 EKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNP 422 +E + K+L + + + Sbjct: 448 GDLESGERYMLKALAIRQKLYPENHYQVGQTYRYLGE 484 >UniRef50_Q1IKQ5 Lysine decarboxylase transcriptional regulator, CadC n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IKQ5_ACIBL Length = 945 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 73/471 (15%), Positives = 147/471 (31%), Gaps = 33/471 (7%) Query: 1 MDLENK--FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIE 58 M+L + F LT+G V + + VL +LLE G +V ++ I + Sbjct: 1 MELPSNEAKVVAFGLFKADLNARSLTKGGASVRLQDQPFEVLGLLLERPGEIVSREEIRQ 60 Query: 59 SVW-KNIIVS-DESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFS------GQVFKTK 109 +W + V D+ L I LR R +ET+ R+GYRF V + Sbjct: 61 RLWSSDTFVEFDDGLNTAIKKLRTALGDSALNPRFVETVPRRGYRFIAPVSVLSPVATPE 120 Query: 110 INEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHIS 169 + ++ + + ++ + G + Y + Sbjct: 121 PESQTEDVVIASRERSQITITQPHHPVFWSTVALGLAISFLAGGWYYRSRS----GSDSV 176 Query: 170 QNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDN 229 ++ R +P V G + +T ++ A+ L + + + Sbjct: 177 VSAAPIRMRPAVAVLGFHDLTGRRDTAWLSTAIAQMLCTELGAGEQLRMVSGEQ--VARA 234 Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 + E ++ A + ++ SD ++ G + D +P + + RLQ+ Sbjct: 235 RKEVAWDREDTLEKASLTK-LRSRLGSDYVVIGAYTVVD-SPAGPQ--IRLDVRLQDARA 290 Query: 290 IQTLKTECYCL------LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI--L 341 +TL E H L + ++ A + + + L Sbjct: 291 GETLLEESDTGNQSELFALVSHTGQRLRDRLGIDRANGDHDAQIRASL---PKNVEAARL 347 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 G+ G A + L +A + A + A A + + L Sbjct: 348 YSEGVAQLRDGNAVQARDLLTKAIAIEPEHALSHAALAEAWTMLGYDSRASQEVQLAFNL 407 Query: 402 EP-RRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ 451 R+ + E + + I++Y K + + +L Q Sbjct: 408 SQDLSRETKLSIEGRYRALAHDYPKAIEIYRKLRDLYPDNIDYALVLARVQ 458 Score = 65.5 bits (158), Expect = 4e-09, Method: Composition-based stats. Identities = 50/365 (13%), Positives = 100/365 (27%), Gaps = 44/365 (12%) Query: 113 DNTSDYSIAIFPFTTSLNTLDPLILNQELVQII--------SNKKIDGLYTYPMAATNFC 164 ++A+ F D L+ + Q++ + + G Sbjct: 181 PIRMRPAVAVLGFHDLTGRRDTAWLSTAIAQMLCTELGAGEQLRMVSGEQVARARKEVAW 240 Query: 165 NDH-----ISQNSFLSRFKPDYFVTGRI----NQNNAVNTLYIELIDAKNLFLI--ASNH 213 + S SR DY V G + L + L DA+ + S+ Sbjct: 241 DREDTLEKASLTKLRSRLGSDYVVIGAYTVVDSPAGPQIRLDVRLQDARAGETLLEESDT 300 Query: 214 LPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQG--YKNHYLSDEMLAGKKELYDFTP 271 EL + + + Q + KN + G +L D Sbjct: 301 GNQSELFALVSHTGQRLRDRLGIDRANGDHDAQIRASLPKNVEAARLYSEGVAQLRDGNA 360 Query: 272 ESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS 331 +A + + I+ + LAE L +A + + Sbjct: 361 V---QARDLLTK---AIAIEPEHALSHAALAEAWTMLGYDS---------RASQEVQLAF 405 Query: 332 DITTVDGK--ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 +++ + L+I G L+ + ++ + + D A V + Sbjct: 406 NLSQDLSRETKLSIEGRYRALAHDYPKAIEIYRKLRDLYPDNIDYALVLARVQNKGGLPK 465 Query: 390 EARICIDKSLQL------EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVII 443 +A + I Q+ +PR A L+ K +V++ Sbjct: 466 DALLTIATMRQIPGTASHDPRIDLAEASAAETLSDFQRSLQAASVAAVKAESEGRTQVVL 525 Query: 444 DNILK 448 + K Sbjct: 526 EARAK 530 >UniRef50_UPI0001699C2A putative adenylate cyclase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699C2A Length = 261 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 85/251 (33%), Gaps = 17/251 (6%) Query: 103 GQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMAA 160 ++ + + ++ +I++ PF T+ + + + ++ ++ ++ Sbjct: 1 MNRGESPVTQSCSAPLTISVLPFKTAADDSVSIRFAGGITADLADDLSRLSEIWVI---- 56 Query: 161 TNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYIELIDAKNLFLIASNHL--PVDE 218 ND + Y V+G + +++ L ++ + S H P+ E Sbjct: 57 ----NDPGGSGDLHHEKRARYLVSGSVFHEQGRLLVHVRLTESATARQLWSEHFDHPLGE 112 Query: 219 LHNTSQFIIDNIL-QTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRA 277 L + I ++ Q + ++ R + +N L + L E +A Sbjct: 113 LFDMQSEISRRVVDQLSLRVSQAERRHLARRYTRNLAAYGYFLDAQAHLLTRKAEDNRQA 172 Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-AQKALELLDYVSDITTV 336 ++ + + + Y LA H + + SE A +A E D +I Sbjct: 173 RALY---RLAIEQDPAFAQAYADLALSHAADYRNQWSEDGGASLSRARENGDTALNIDPE 229 Query: 337 DGKILAIMGLI 347 L G+ Sbjct: 230 IPADLLGAGVC 240 >UniRef50_B4CW77 Two component transcriptional regulator, winged helix family n=2 Tax=Verrucomicrobia RepID=B4CW77_9BACT Length = 229 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 4 ENKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWK- 62 + Y F + T L + + V + KE +L L+ +AG + +D I+ +VW Sbjct: 126 QTGTVYTFGDCRFDTTARTLVRNGQDVPLSPKEFDLLTFLVTNAGRALSRDRIMSTVWGY 185 Query: 63 NIIVSDESLTRCIYSLRCIFE-KIGYDRCIETIYRKGYRFSGQV 105 + V+ S+ R + +LR E R ++T+ GY+F + Sbjct: 186 DSRVTPRSIDRFVNALRNKIEPDPAEPRILKTVREFGYKFELPM 229 >UniRef50_Q1MK13 Putative transcriptional regulator n=1 Tax=Rhizobium leguminosarum bv. viciae 3841 RepID=Q1MK13_RHIL3 Length = 968 Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats. Identities = 54/399 (13%), Positives = 122/399 (30%), Gaps = 30/399 (7%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 SY F + + E L + V + + L +L L+E G +V K ++ VW + V Sbjct: 3 SYFFGPYVLVPERQSLMRDQTAVRVGSRALEILAALIERPGELVGKAELVSRVWPDTFVE 62 Query: 68 DESLTRCIYSLRCIFEK-IGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFT 126 + +L + +LR G + I T+ +GYRF V + ++ + + S Sbjct: 63 ESNLKVNVAALRRALGDAPGDMQYIATVSGRGYRFVFPVRISGQSDTSVTATSQGARTNN 122 Query: 127 TSLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDY----- 181 ++T + + I ++ L T + + Y Sbjct: 123 LPVSTTRLVGRGDAVDAIRCAVEVSRLLTIVGPGGV--GKTRLALAIADQLTAAYHDGIW 180 Query: 182 -FVTGRINQNNAVNTLYIELIDAKNLFLIASNH-------LPVDELHNTSQFIIDNILQT 233 + TL I + S + D +++++ Sbjct: 181 FVDLATV----NDATLVPTAIATAMGLRVHSANIKAAVAAFATDREFMLVLDNCEHVIEA 236 Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFD--RLQNKSDIQ 291 V ++ LA + + + +++Y P ++ + ++ Sbjct: 237 VASCAETL-LAAAARVRILATSREPLRVVGEQVYRLPPLETPPEVSELSAAQALAFPAVE 295 Query: 292 TLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 E G + + + L+ L ++ + L+ L+ Sbjct: 296 LFVERAAASRGE---FKLNDGNAPVAAEICRRLDGLALAIELAAPRLDAFSTRELLDLLA 352 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 SH+L ++ + +L + + E Sbjct: 353 ---DQSHVLSDR-RSGDPRHHTLAATLDWSYGLLAEPER 387 >UniRef50_Q988M4 Mll6677 protein n=1 Tax=Mesorhizobium loti RepID=Q988M4_RHILO Length = 168 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 2/133 (1%) Query: 11 FLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDES 70 F L + +L +G++ V + + LG+LI LLE G +V K ++ VW ++ V + Sbjct: 31 FGPFLLFPKQFLLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARVWPDVFVVPTN 90 Query: 71 LTRCIYSLRCIFEKI-GYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSL 129 LT I +LR + +R I I +GY+F V + + + L Sbjct: 91 LTVHISALRRVLRDGRDGNRFIINIPGRGYQFVASVHTPLQRKASLETMRPIVPALEERL 150 Query: 130 NTLDP-LILNQEL 141 P + Sbjct: 151 QIQAPSEYGAYGV 163 >UniRef50_Q112K5 TPR repeat n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q112K5_TRIEI Length = 649 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 37/322 (11%), Positives = 86/322 (26%), Gaps = 48/322 (14%) Query: 158 MAATNFCNDHISQNSFLSRFKPDYFVTGR-----------INQNNAVNTLYIELIDAKNL 206 F ++ + V G +N+ + +++ L A + Sbjct: 177 REGFQFTPAKVTNPRAGDLLNYEPTVPGEGVYPGMSGGAVLNKAGQLMGIHVGLTKAGDG 236 Query: 207 FLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY-----LSDEMLA 261 + + D S+ ++ + + P S + Sbjct: 237 EGVLVSTFLRDIPQQVSRVLVRSTSAALPSPIPSPKNRAVGNTDNVTPSQIQNAESYYEQ 296 Query: 262 GKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELA-- 319 G K E +A+ +++ + + Y + + + +L Sbjct: 297 GDKH---HDREEFEQALADYNQ---AIQLNPKYADAYNNRGIVYRKQGKYDLALADLNQA 350 Query: 320 -----------------------AQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKV 356 AL + + + GL+ G+ + Sbjct: 351 IQLNPKYADAYKNRGNVYYNQGKYDLALADYNQAIQLNPKYAEAYNNRGLVYDDQGKYDL 410 Query: 357 SHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVD 416 + F QA + A Y R +V+ K + A ++++QL P+ +A + V Sbjct: 411 AIAEFNQAIQLNPKYAYAYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGV- 469 Query: 417 MYVPNPLKNNIKLYYKETESES 438 I Y + + Sbjct: 470 YLEQGKYDLAIADYNQAIQLNP 491 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 10/153 (6%) Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 + E Y + + + A+ + + Sbjct: 377 ALADYNQAIQLNPKYAEAYNNRGLVY---------DDQGKYDLAIAEFNQAIQLNPKYAY 427 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 G++ G+ ++ + QA + A Y R V+ K + A ++++ Sbjct: 428 AYNNRGVVYDDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIADYNQAI 487 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 QL P+ +A + + Y + Sbjct: 488 QLNPKLAEAYNNR-GAVYRKQGKYDLALADYNE 519 Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats. Identities = 25/199 (12%), Positives = 59/199 (29%), Gaps = 15/199 (7%) Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 + LA +Q + + E + +YD A+ F++ + Y Sbjct: 376 LALADYNQAIQLNPKYAEAYNNRGLVYD-DQGKYDLAIAEFNQ---AIQLNPKYAYAYNN 431 Query: 301 LAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHIL 360 + + + AL + + + G + G+ ++ Sbjct: 432 RGVVY---------DDQGKYDLALADYNQAIQLNPKYAEAYNNRGGVYLEQGKYDLAIAD 482 Query: 361 FEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL-EPRRRKAVVIKECVDMYV 419 + QA + +A Y R V+ K + A ++S++L P+ + Sbjct: 483 YNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQLW-LPYNNRGLVYND 541 Query: 420 PNPLKNNIKLYYKETESES 438 + Y + + Sbjct: 542 QRKYDLALADYSQAIQLNP 560 Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats. Identities = 21/176 (11%), Positives = 43/176 (24%), Gaps = 34/176 (19%) Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS------------------------- 314 + E Y + + + Sbjct: 479 AIADYNQAIQLNPKLAEAYNNRGAVYRKQGKYDLALADYNESIRLNNPQLWLPYNNRGLV 538 Query: 315 -ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 + AL + D G + G+ ++ + QA + A+ Sbjct: 539 YNDQRKYDLALADYSQAIQLNPKDAYAYYNRGNVYDDQGKYDLAIADYSQAIQLNPKYAN 598 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKL 429 YY R L + +E+A +K+ L ++ + N L +L Sbjct: 599 AYYTRGLTNKDQRNMEKAISDFEKAADL--------YKQQGNQTWYQNSLDQLKEL 646 >UniRef50_Q24FG4 TPR Domain containing protein n=1 Tax=Tetrahymena thermophila SB210 RepID=Q24FG4_TETTH Length = 1417 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 62/181 (34%), Gaps = 10/181 (5%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 FT E + + + I + Y +A + + + ++++ L+ Sbjct: 51 FTYEKQDKLDQALECYKKVISINPSYIKAYVSIARVYFN---------QDNLDESIKFLE 101 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 +I + +G + + +++A + +Y +V+ KI Sbjct: 102 KAIEIDPNYAEAYERLGWVYENQNLIDQAIDSYKKAIEIDPNHLDSHYSLGVVYESQGKI 161 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 +E K L+++P KA +I + + ++ IK K E E + L Sbjct: 162 DEGIEHYKKMLEIDPNNIKA-LINLSRNYFCDLMHEDAIKCLNKVIEIEPKNKVAYERLG 220 Query: 449 L 449 Sbjct: 221 F 221 Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats. Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 33/229 (14%) Query: 236 KPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKT 295 K E L K+ + N+ D G +F + A++ ++ +I + Sbjct: 943 KQEELEVLKKKAEENTNNPE-DYYKLGYVYYTNFN---MDEAISCLNK---AIEINPNYS 995 Query: 296 ECYCLLAECHMSL----------------------ALHGKSE---LELAAQKALELLDYV 330 E Y L + A++G + +A++ Sbjct: 996 EAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTAEAIKCYMAA 1055 Query: 331 SDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEE 390 ++ K +G+ + +++A + Y L++ K+++ Sbjct: 1056 LELDPKSVKTHYNLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGLIYEMKGKLDD 1115 Query: 391 ARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 A C K+L++ P A + Y N +++ + Y K E + Sbjct: 1116 ALTCYQKALEINPNYVNA-HNNVGLVYYAQNKMEDALINYRKALELNPN 1163 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 55/160 (34%), Gaps = 9/160 (5%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 ++ + H +L + E E +A+ ++ Sbjct: 1047 EAIKCYMAALELDPKSVK-------THYNLGI--SFEDERNYDQAVYHYKKAVELDPRYI 1097 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +GLI + G+ + +++A + + + + LV++ K+E+A I K+ Sbjct: 1098 NAYNNLGLIYEMKGKLDDALTCYQKALEINPNYVNAHNNVGLVYYAQNKMEDALINYRKA 1157 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESES 438 L+L P +A+ + + I Y + E Sbjct: 1158 LELNPNYYQALYNSGLIYETYYKQIDQAIAFYKRVIELSP 1197 Score = 97.1 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 27/230 (11%), Positives = 67/230 (29%), Gaps = 11/230 (4%) Query: 221 NTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTI 280 + I + A+ + Y D + E Sbjct: 1023 EIDSKCFNAINGLGNIYLDQKLTAEAIKCYMAALELDPKSVKTHYNLGISFEDERNYDQA 1082 Query: 281 FDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKI 340 + ++ Y L + E++ AL +I Sbjct: 1083 VYHYKKAVELDPRYINAYNNLGLIY---------EMKGKLDDALTCYQKALEINPNYVNA 1133 Query: 341 LAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVH-FHNEKIEEARICIDKSL 399 +GL+ + + + I + +A + + Y L++ + ++I++A + + Sbjct: 1134 HNNVGLVYYAQNKMEDALINYRKALELNPNYYQALYNSGLIYETYYKQIDQAIAFYKRVI 1193 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 +L P+ A I+ + + Y + E + + + N L + Sbjct: 1194 ELSPKYFSA-YIRLGNIYLDSKMMDEALDCYQRILEIDPNYIDAINNLGI 1242 Score = 96.7 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 31/223 (13%), Positives = 62/223 (27%), Gaps = 10/223 (4%) Query: 219 LHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAM 278 + +D I E L + + YK D + E Sbjct: 409 ILELDPNYVDAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNLGIVYELKKMHD 468 Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 + + +I Y L ++ + AL +I Sbjct: 469 QAIESYERAIEIDPKYINAYNKLGNIYL---------DKKILYSALNYYKKALEIDPNYV 519 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +GL+ + + +A + YY LV+ + E A +K+ Sbjct: 520 NAYNNIGLVYYDKKMFDEALESYNKAIEINPKYNQAYYNSGLVYELKNQKETAIEKYEKA 579 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 ++L P+ A +I+ + I+ + + E V Sbjct: 580 IELSPKYISA-LIRLADIYADSQQYQRGIECFKRILEITPDSV 621 Score = 94.0 bits (232), Expect = 1e-17, Method: Composition-based stats. Identities = 24/193 (12%), Positives = 66/193 (34%), Gaps = 13/193 (6%) Query: 247 DQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHM 306 + + + + L +Y+ + I +A+ + R+ ++ Y L ++ Sbjct: 1155 RKALELNPNYYQALYNSGLIYETYYKQIDQAIAFYKRV---IELSPKYFSAYIRLGNIYL 1211 Query: 307 SLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKI 366 +AL+ + +I + +G++ + + +A Sbjct: 1212 ---------DSKMMDEALDCYQRILEIDPNYIDAINNLGIVYEEKEMLDEALKCYRRAIE 1262 Query: 367 HSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNN 426 + YY +++ K ++A C ++L+P+ A+ + + + N Sbjct: 1263 LNPKYTKAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAINRLGNIYLDLQND-DEA 1321 Query: 427 IKLYYKETESESH 439 + Y K E + Sbjct: 1322 LACYQKALEINPN 1334 Score = 91.7 bits (226), Expect = 6e-17, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 54/171 (31%), Gaps = 10/171 (5%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 + + + +I Y + + + +ALE + +I Sbjct: 503 SALNYYKKALEIDPNYVNAYNNIGLVYY---------DKKMFDEALESYNKAIEINPKYN 553 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + GL+ L Q + + +E+A S S A ++ +++ + C + Sbjct: 554 QAYYNSGLVYELKNQKETAIEKYEKAIELSPKYISALIRLADIYADSQQYQRGIECFKRI 613 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 L++ P + Y + Y K E + + N + L Sbjct: 614 LEITPDSVYDNY-RLGYIYYCLKNFDEAMYYYKKALEINPNYINAINNVGL 663 Score = 89.0 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 24/204 (11%), Positives = 61/204 (29%), Gaps = 31/204 (15%) Query: 259 MLAGKKELYD--FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-- 314 + + F +++ ++ ++ +I E Y L + + L ++ Sbjct: 76 YIKAYVSIARVYFNQDNLDESIKFLEK---AIEIDPNYAEAYERLGWVYENQNLIDQAID 132 Query: 315 -----------------------ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLS 351 E + + +E + +I + K L + Sbjct: 133 SYKKAIEIDPNHLDSHYSLGVVYESQGKIDEGIEHYKKMLEIDPNNIKALINLSRNYFCD 192 Query: 352 GQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVI 411 + + + Y ++ + KI+EA K ++L+P ++V I Sbjct: 193 LMHEDAIKCLNKVIEIEPKNKVAYERLGFIYENQNKIDEAIQNYQKVIELDP-NFQSVYI 251 Query: 412 KECVDMYVPNPLKNNIKLYYKETE 435 + N + I+ K + Sbjct: 252 SLGFMYFTKNMDEEAIECLKKGIQ 275 Score = 88.6 bits (218), Expect = 5e-16, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 10/163 (6%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 +I Y ++ ++ +KALE +I Sbjct: 809 DALACFLKVIEIDPKYMSAYNRAGNIYLDRQMN---------EKALEFYKKALEIDPTYV 859 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 +GLI + + +++A + + Y LV+ + E A +C ++ Sbjct: 860 NAYNNIGLIFYNQRKLDDALEYYDKALQINPNYFQAQYNSGLVYELKFQNELAILCYTRA 919 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 L++ P A I+ + + +++ K+ E ++ Sbjct: 920 LEINPNYTNA-QIRLENILLKDGIKQEELEVLKKKAEENTNNP 961 Score = 87.1 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 10/154 (6%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 D Q +I + L + E + +AL+ ++ Sbjct: 1218 EALDCYQRILEIDPNYIDAINNLGIVY---------EEKEMLDEALKCYRRAIELNPKYT 1268 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 K MG+I + + ++ + ++ + +EA C K+ Sbjct: 1269 KAYYNMGIIYEDQNKFDDAINCYKTIIELDPKYINAINRLGNIYLDLQNDDEALACYQKA 1328 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 L++ P A + + I+ Y K Sbjct: 1329 LEINPNYLYA-FYNLGLVYSEKKKIGKAIQCYQK 1361 Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 280 IFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGK 339 + + +I + L + E + +A++ I K Sbjct: 742 ALECFKKILEIDPNYIDAINNLGIVY---------EDKQMFDEAIDCYIKAIQINPNYVK 792 Query: 340 ILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 +G++ + + F + S Y ++ + E+A K+L Sbjct: 793 AHYNLGVLYENKFKFDDALACFLKVIEIDPKYMSAYNRAGNIYLDRQMNEKALEFYKKAL 852 Query: 400 QLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 +++P A + Y L + ++ Y K + + Sbjct: 853 EIDPTYVNA-YNNIGLIFYNQRKLDDALEYYDKALQINPN 891 Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 55/183 (30%), Gaps = 26/183 (14%) Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSEL--------------------- 316 F+ + +I E L + +L + ++E+ Sbjct: 298 EEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNALQIDPLDIYTHYNLGL 357 Query: 317 ----ELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIA 372 + KAL ++ G I + + + +++ + Sbjct: 358 VYETKKMFDKALSCYQKAIELNPKYLNAYIRSGNIYLETKKQDDAIQCYQKILELDPNYV 417 Query: 373 SLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 +V+ + ++E+ C K+LQ++P KA + + I+ Y + Sbjct: 418 DAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHY-NLGIVYELKKMHDQAIESYER 476 Query: 433 ETE 435 E Sbjct: 477 AIE 479 Score = 84.0 bits (206), Expect = 1e-14, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 50/162 (30%), Gaps = 13/162 (8%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 A+ +++ +I+ Y L + E + +A++ V ++ Sbjct: 195 HEDAIKCLNKV---IEIEPKNKVAYERLGFIY---------ENQNKIDEAIQNYQKVIEL 242 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + +G + + + ++ + Y V+ EEA Sbjct: 243 DPNFQSVYISLGFMYFTKNMDEEAIECLKKGIQINPKFVQAYERLGYVYQMKNMTEEAFE 302 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 K+++++P+ +A + Y + Y + Sbjct: 303 YYKKAIEIDPKYFEA-QFNLGLLYYNLKMVNEAEVCYLNALQ 343 Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 56/154 (36%), Gaps = 10/154 (6%) Query: 282 DRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKIL 341 + + +I + L+ + +H + A++ L+ V +I + Sbjct: 166 EHYKKMLEIDPNNIKALINLSRNYFCDLMH---------EDAIKCLNKVIEIEPKNKVAY 216 Query: 342 AIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQL 401 +G I + + +++ + S+Y ++F EEA C+ K +Q+ Sbjct: 217 ERLGFIYENQNKIDEAIQNYQKVIELDPNFQSVYISLGFMYFTKNMDEEAIECLKKGIQI 276 Query: 402 EPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETE 435 P+ +A + + N + + Y K E Sbjct: 277 NPKFVQAYE-RLGYVYQMKNMTEEAFEYYKKAIE 309 Score = 82.1 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 20/170 (11%), Positives = 54/170 (31%), Gaps = 10/170 (5%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 + ++ T+ Y + + E + A+ + ++ Sbjct: 1252 EALKCYRRAIELNPKYTKAYYNMGIIY---------EDQNKFDDAINCYKTIIELDPKYI 1302 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + +G I + +++A + + +Y LV+ +KI +A C K Sbjct: 1303 NAINRLGNIYLDLQNDDEALACYQKALEINPNYLYAFYNLGLVYSEKKKIGKAIQCYQKV 1362 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILK 448 + ++P+ I V + + Y K + + + + + Sbjct: 1363 ISIDPKYID-GYINLGVIFDEKKQMNKALTQYKKALKIDPNDPDCEQYIA 1411 Score = 80.5 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 18/172 (10%), Positives = 58/172 (33%), Gaps = 13/172 (7%) Query: 270 TPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDY 329 T + +A++ + + ++ Y ++ A++ Sbjct: 361 TKKMFDKALSCYQK---AIELNPKYLNAYIRSGNIYLET---------KKQDDAIQCYQK 408 Query: 330 VSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIE 389 + ++ + +G++ S +++A +Y +V+ + + Sbjct: 409 ILELDPNYVDAINNLGIVYEEKKMLDESMECYKKALQIDPLYVKAHYNLGIVYELKKMHD 468 Query: 390 EARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRV 441 +A +++++++P+ A K L + + Y K E + + V Sbjct: 469 QAIESYERAIEIDPKYINA-YNKLGNIYLDKKILYSALNYYKKALEIDPNYV 519 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 10/160 (6%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 Q ++ Y L + + + ++A+E L I Sbjct: 231 EAIQNYQKVIELDPNFQSVYISLGFMYFTKNMD---------EEAIECLKKGIQINPKFV 281 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + +G + + + + +++A + L++++ + + EA +C + Sbjct: 282 QAYERLGYVYQMKNMTEEAFEYYKKAIEIDPKYFEAQFNLGLLYYNLKMVNEAEVCYLNA 341 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESES 438 LQ++P + + Y K E Sbjct: 342 LQIDPLDIYTHY-NLGLVYETKKMFDKALSCYQKAIELNP 380 Score = 79.4 bits (194), Expect = 3e-13, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 54/158 (34%), Gaps = 12/158 (7%) Query: 279 TIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDG 338 D + +I ++ + ALE + +I Sbjct: 707 EALDCYKKVMEINPNYFSALIRSGNIYLDKYM---------TDNALECFKKILEIDPNYI 757 Query: 339 KILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKS 398 + +G++ + + +A + + +Y +++ + K ++A C K Sbjct: 758 DAINNLGIVYEDKQMFDEAIDCYIKAIQINPNYVKAHYNLGVLYENKFKFDDALACFLKV 817 Query: 399 LQLEPRRRKAVVIKECVDMYVPNPL-KNNIKLYYKETE 435 ++++P+ A ++Y+ + + ++ Y K E Sbjct: 818 IEIDPKYMSAY--NRAGNIYLDRQMNEKALEFYKKALE 853 Score = 78.2 bits (191), Expect = 6e-13, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 44/195 (22%) Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + + +I Y + + + ALE D I Sbjct: 842 EKALEFYKKALEIDPTYVNAYNNIGLIFYN---------QRKLDDALEYYDKALQINPNY 892 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASL----------------------- 374 + GL+ L Q +++ + + +A + + + Sbjct: 893 FQAQYNSGLVYELKFQNELAILCYTRALEINPNYTNAQIRLENILLKDGIKQEELEVLKK 952 Query: 375 -----------YYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPL 423 YY V++ N ++EA C++K++++ P +A K + Sbjct: 953 KAEENTNNPEDYYKLGYVYYTNFNMDEAISCLNKAIEINPNYSEA-YDKLGLIYEEKKMD 1011 Query: 424 KNNIKLYYKETESES 438 + I+ Y K E +S Sbjct: 1012 EKAIEYYKKAIEIDS 1026 Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 49/128 (38%), Gaps = 1/128 (0%) Query: 314 SELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIAS 373 + +A+E + V +I +G + + +++ + Sbjct: 19 FQESGNFDEAVEYFNRVLNINLNHEDANYNLGFTYEKQDKLDQALECYKKVISINPSYIK 78 Query: 374 LYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 Y A V+F+ + ++E+ ++K+++++P +A V N + I Y K Sbjct: 79 AYVSIARVYFNQDNLDESIKFLEKAIEIDPNYAEAYERLGWV-YENQNLIDQAIDSYKKA 137 Query: 434 TESESHRV 441 E + + + Sbjct: 138 IEIDPNHL 145 Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 10/172 (5%) Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVD 337 + L+ K++ T E Y L + + +A+ L+ +I Sbjct: 944 QEELEVLKKKAEENTNNPEDYYKLGYVYYTNF---------NMDEAISCLNKAIEINPNY 994 Query: 338 GKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDK 397 + +GLI + + +++A + + ++ + EA C Sbjct: 995 SEAYDKLGLIYEEKKMDEKAIEYYKKAIEIDSKCFNAINGLGNIYLDQKLTAEAIKCYMA 1054 Query: 398 SLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKL 449 +L+L+P+ K + + Y K E + + N L L Sbjct: 1055 ALELDPKSVKTHY-NLGISFEDERNYDQAVYHYKKAVELDPRYINAYNNLGL 1105 Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats. Identities = 22/164 (13%), Positives = 51/164 (31%), Gaps = 13/164 (7%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 + ++ A+ +++ +I + + + E + +AL+ Sbjct: 666 YNQKNYEEALKCYEK---AIEIDKNYFQAHYNSGILY---------EAKKMIDEALDCYK 713 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKI 388 V +I L G I + F++ + +V+ + Sbjct: 714 KVMEINPNYFSALIRSGNIYLDKYMTDNALECFKKILEIDPNYIDAINNLGIVYEDKQMF 773 Query: 389 EEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYK 432 +EA C K++Q+ P KA V + + + K Sbjct: 774 DEAIDCYIKAIQINPNYVKAHY-NLGVLYENKFKFDDALACFLK 816 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 23/199 (11%), Positives = 64/199 (32%), Gaps = 30/199 (15%) Query: 278 MTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKS-----------ELE--------- 317 T ++ + ++ LA+ + + + Sbjct: 570 ETAIEKYEKAIELSPKYISALIRLADIYADSQQYQRGIECFKRILEITPDSVYDNYRLGY 629 Query: 318 -----LAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIA 372 +A+ +I + +GL+ + + +E+A + Sbjct: 630 IYYCLKNFDEAMYYYKKALEINPNYINAINNVGLVYYNQKNYEEALKCYEKAIEIDKNYF 689 Query: 373 SLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDM--YVPNPLKNNIKLY 430 +Y +++ + I+EA C K +++ P A++ + + Y+ N ++ + Sbjct: 690 QAHYNSGILYEAKKMIDEALDCYKKVMEINPNYFSALIRSGNIYLDKYMT---DNALECF 746 Query: 431 YKETESESHRVIIDNILKL 449 K E + + + N L + Sbjct: 747 KKILEIDPNYIDAINNLGI 765 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 1/95 (1%) Query: 345 GLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPR 404 GL SG + F + + + Y + +K+++A C K + + P Sbjct: 16 GLEFQESGNFDEAVEYFNRVLNINLNHEDANYNLGFTYEKQDKLDQALECYKKVISINPS 75 Query: 405 RRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 KA V + + L +IK K E + + Sbjct: 76 YIKAYV-SIARVYFNQDNLDESIKFLEKAIEIDPN 109 Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats. Identities = 13/113 (11%), Positives = 27/113 (23%), Gaps = 9/113 (7%) Query: 273 SIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSD 332 + Q +I + L + + KA++ V Sbjct: 1314 DLQNDDEALACYQKALEINPNYLYAFYNLGLVY---------SEKKKIGKAIQCYQKVIS 1364 Query: 333 ITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 I +G+I Q + +++A + Y A Sbjct: 1365 IDPKYIDGYINLGVIFDEKKQMNKALTQYKKALKIDPNDPDCEQYIAQSKSWL 1417 >UniRef50_B1KD58 Putative transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KD58_SHEWM Length = 501 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 65/407 (15%), Positives = 136/407 (33%), Gaps = 23/407 (5%) Query: 8 SYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVS 67 Y+ + + QV + K L ++I L++ +VV K+ ++ VW +++ Sbjct: 4 VYYGDGFSICCSTHQIQFNDRQVTVRPKTLALIIELIKQQDNVVNKESLLAKVWDDVVCD 63 Query: 68 DESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 ++ L + I +R IF I + I+T RKGY + V +E + S Sbjct: 64 EQVLFQTISEIRKIFGPI---QVIQTYPRKGYAWVATVNSVPCSETVSLTPSQITPSVDL 120 Query: 128 SLNTLDPLILNQELVQIISNKKID-------GLYTYPMAATNFCNDHISQNSFLSRFKPD 180 L+L + L+ T I + D Sbjct: 121 GSENPLGLLLGWGKSKQALPLYFFTVSLLLIFLFFPSKPTTPNDGTVIVLPVVNNVAGQD 180 Query: 181 YFVTGRINQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERS 240 + A++ L +L + V ++ T + D + + + Sbjct: 181 HLW----VPLGAMDQLIGKLSRGAKVMSTEYVLPLVSQIKRTKAYSADELANVFNTTGAN 236 Query: 241 VRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCL 300 + + + G + Y L + ++ S + + Q K E + Sbjct: 237 LIVESELSGSVHEYKLSYKLHFQHDVKVGVLFSDNVDEALISLAKTVLVYQGGKVEQLRV 296 Query: 301 LAECHMSLALHGKS---ELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVS 357 E + + ++ + E A +LL V ++ + ++ ++ + Sbjct: 297 KFESELKNEMIHRAIALQKEKQLVAANQLLISVLELEPDNNRVRLLLAQWFVEQEMLSRA 356 Query: 358 HILFEQAKIHSTDIASL-----YYYRALVHFHNEKIEEARICIDKSL 399 L + A D + YY+RA+ F ++A + +DKSL Sbjct: 357 RELLDVAITQVRDKSQARLGRLYYWRAITLFDTA-ADKAMLELDKSL 402 >UniRef50_A3D2S0 Transcriptional regulator, CadC n=3 Tax=Shewanella RepID=A3D2S0_SHEB5 Length = 1067 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 6/165 (3%) Query: 1 MDLE-NKFSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIES 59 MD+ + ++ F E L G + + K + VL+ L + AG VV D I+ Sbjct: 1 MDIVMSDSTFFFGEWQINPSANSLLLGKQVKQLEPKAMDVLLFLCQRAGEVVSSDEIVSH 60 Query: 60 VWKNIIVSDESLTRCIYSLRCIFEKIGYDR-CIETIYRKGYRF--SGQVFKTKINEDNTS 116 W + D L + I LR + D IETI ++GYR + Sbjct: 61 CWPGVDTGDNPLHKIINQLRRALDDSATDPIYIETIRKRGYRTLAEVRFPIGHEATACPQ 120 Query: 117 DYSIAIFPFTTSLNTLDPLILNQELVQIIS--NKKIDGLYTYPMA 159 + + + + + IS +I Y A Sbjct: 121 SWQGGSPFPGLQAYSANYAEVFFGRSEQISTLLNRISQQIIYGRA 165 >UniRef50_B5ZVZ5 Putative uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2304 RepID=B5ZVZ5_RHILW Length = 596 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 41/380 (10%), Positives = 103/380 (27%), Gaps = 19/380 (5%) Query: 79 RCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILN 138 R G + + + + + + +I + F + ++ Sbjct: 164 RYWLLAAGAVIILASAAALLRQVESPSAEREAGPSANNRPTIIVERFESGSGGNLASDIS 223 Query: 139 QELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRINQNNAVNTLYI 198 + + I K + + A L Y + G + ++ Sbjct: 224 RGMTDDIIEKLVRFNDIVVVTAMPRNKSGQVSAESL------YALQGSVRLEGSMLRSTA 277 Query: 199 ELIDAKNLFLIASNHLPVD----ELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHY 254 L+ + +I +++ D + T + +I V +P + Sbjct: 278 RLVRRADAAVIWASNYDADMTVQGIPKTQASLAGDIATAVARPFGVMFQTDTATIAGRTD 337 Query: 255 LSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMS----LAL 310 +L+ + T ++ A + R K + LL+ H+ Sbjct: 338 AFSCILSYYSYRSEMTVQAHEVAKSCLQRAVEKMPADSNVV---ALLSLIHLDEFRFSYQ 394 Query: 311 HGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTD 370 A +L ++ + + + L + L + A + + Sbjct: 395 LHTKSTAATLGLAKQLAEHAVRLDPKNARALQALMLANFFDNDPAAALSAGAGAYASNPN 454 Query: 371 IASLYYYRALVHFHNEKIEEARICIDKSLQLE--PRRRKAVVIKECVDMYVPNPLKNNIK 428 + L + + + I +++ PR V + C M Sbjct: 455 DTEVAGEYGLRLSMSGEWDRGCTLISEAVGKNAGPRGYYEVGMALCAFMRGDTQAAELWS 514 Query: 429 LYYKETESESHRVIIDNILK 448 + HR+++ +IL Sbjct: 515 RMSDLNYNPMHRLVLLSILG 534 >UniRef50_B7K7N7 TPR repeat-containing protein n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K7N7_CYAP7 Length = 1276 Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 80/217 (36%), Gaps = 18/217 (8%) Query: 240 SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 V+ ++ N + + G+ F ++ A+ +++ ++ K E + Sbjct: 3 EVQGDREATEPVNEEIEALLNQGRDH---FNAQNYQAALDALEQVLT---LEPNKVEAWN 56 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI 359 +L H Q+AL+ + ++ + + G+ G+ + + Sbjct: 57 GQGVVLFNLGKH---------QEALQSFNKALELNSNEANAWNYRGVALLHLGKYEEALS 107 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 F++A + + A R V E+ +EA DK+L+L P +A + V + Sbjct: 108 TFDKALELNPNYAEALSNRGFVLGKLERYQEALPTFDKALELNPNYAEA-LFNRGVALER 166 Query: 420 PNPLKNNIKLYYKETESESHRVIIDNI--LKLKQLTR 454 + + Y K E + + N + L +L R Sbjct: 167 LERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLER 203 Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats. Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 16/206 (7%) Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + K + +++ + ++ + G L+ + + ++ Sbjct: 65 LGKHQEALQSFNKALELNSNEANAWNYRGVALLH------LGKYEEALSTFDKALELNPN 118 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 E L Q+AL D ++ + L G+ + Sbjct: 119 YAEALSNRGFVLGKL---------ERYQEALPTFDKALELNPNYAEALFNRGVALERLER 169 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + + +++A + + A + YR + E+ +EA DK+L+L P + + Sbjct: 170 YQEAFQSYDKALELNPNNAVAWNYRGVALGKLERYQEALPTFDKALELNPNNAEVWFNR- 228 Query: 414 CVDMYVPNPLKNNIKLYYKETESESH 439 V + + ++ Y K + + Sbjct: 229 GVALVNLERYQEALQSYEKALKLNPN 254 Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 50/160 (31%), Gaps = 10/160 (6%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + R + E + +L Q+A + D + Sbjct: 507 LERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNL---------ECYQEAFQSFDKAIQL 557 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 D + G + + + +++A + + A + R + E+ EEA Sbjct: 558 NPNDAEAWNNRGFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERLERYEEAFQ 617 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKE 433 DK++QL P +A + V + + I Y + Sbjct: 618 SFDKAIQLNPNNTEAWYNR-GVVLGKLERHQEAIASYDQA 656 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 24/179 (13%), Positives = 59/179 (32%), Gaps = 11/179 (6%) Query: 262 GKKELYDFTPES-IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAA 320 + P + R F + E + +L Sbjct: 324 AQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYRGLALGNL---------ERY 374 Query: 321 QKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRAL 380 ++A + D + + G+ G+ + + + ++QA + + A + R + Sbjct: 375 EEAFQSYDQAIKLNPNYAEAWYNQGVALGMLERYEEAFQFYDQAIKLNPNHAQAWNNRGV 434 Query: 381 VHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 + E+ EEA DK+++L P +A + V + + ++ Y + + + Sbjct: 435 ALGNLERYEEAFQSFDKAIKLNPNHAEAWYNQ-GVALGKLERYQEALQSYDQAIKLNPN 492 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/217 (13%), Positives = 70/217 (32%), Gaps = 21/217 (9%) Query: 230 ILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSD 289 +L + + + ++ + +Y G E + R F + Sbjct: 129 VLGKLERYQEALPTFDKALELNPNYAEALFNRGVAL------ERLERYQEAFQSYDKALE 182 Query: 290 IQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITG 349 + + L Q+AL D ++ + ++ G+ Sbjct: 183 LNPNNAVAWNYRGVALGKL---------ERYQEALPTFDKALELNPNNAEVWFNRGVALV 233 Query: 350 LSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKA- 408 + + + +E+A + + + YR + E+ +EA DK+ +L P ++ Sbjct: 234 NLERYQEALQSYEKALKLNPNYGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESW 293 Query: 409 ---VVIKECVDMYVPN--PLKNNIKLYYKETESESHR 440 V E ++ Y I+L + ++ +R Sbjct: 294 NNRGVALEKLERYQEAFQSYDQAIQLNLNDAQAWYNR 330 Score = 104 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 24/196 (12%), Positives = 64/196 (32%), Gaps = 17/196 (8%) Query: 244 AKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAE 303 + + N+ + G ++ R F + E + Sbjct: 348 DQAIKLNPNYAEAWNY-RGLAL------GNLERYEEAFQSYDQAIKLNPNYAEAW----- 395 Query: 304 CHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQ 363 + G E ++A + D + + G+ G + + + F++ Sbjct: 396 -YNQGVALGMLER---YEEAFQFYDQAIKLNPNHAQAWNNRGVALGNLERYEEAFQSFDK 451 Query: 364 AKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPL 423 A + + A +Y + + E+ +EA D++++L P +A + V + Sbjct: 452 AIKLNPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQ-GVALGKLERY 510 Query: 424 KNNIKLYYKETESESH 439 + ++ Y + + + Sbjct: 511 QEALQSYDQAIKLNPN 526 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 30/207 (14%), Positives = 70/207 (33%), Gaps = 16/207 (7%) Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + + + +++ ++ +Y G ES+ R + ++ Sbjct: 235 LERYQEALQSYEKALKLNPNYGEAWNYRGVAL------ESLERYQEALEAFDKARELNPN 288 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 E + E Q+A + D + D + G G + Sbjct: 289 NAESWNNRGVA---------LEKLERYQEAFQSYDQAIQLNLNDAQAWYNRGFPLGKLER 339 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKE 413 + + F+QA + + A + YR L + E+ EEA D++++L P +A + Sbjct: 340 YEEAFQSFDQAIKLNPNYAEAWNYRGLALGNLERYEEAFQSYDQAIKLNPNYAEAWYNQ- 398 Query: 414 CVDMYVPNPLKNNIKLYYKETESESHR 440 V + + + + Y + + + Sbjct: 399 GVALGMLERYEEAFQFYDQAIKLNPNH 425 Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 12/183 (6%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + R F + E + + GK E Q+AL+ D + Sbjct: 439 LERYEEAFQSFDKAIKLNPNHAEAW------YNQGVALGKLER---YQEALQSYDQAIKL 489 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + G+ G + + + ++QA + + A +Y R + E +EA Sbjct: 490 NPNYAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNRGFALGNLECYQEAFQ 549 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH--RVIIDNILKLKQ 451 DK++QL P +A + + + ++ Y K + + + + + L++ Sbjct: 550 SFDKAIQLNPNDAEAWNNR-GFSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALER 608 Query: 452 LTR 454 L R Sbjct: 609 LER 611 Score = 99.8 bits (247), Expect = 2e-19, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 68/201 (33%), Gaps = 14/201 (6%) Query: 240 SVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYC 299 L +Q E G+ + F A+ F++ + + Sbjct: 35 QAALDALEQVLTLEPNKVEAWNGQGVVL-FNLGKHQEALQSFNKALELNSNEAN------ 87 Query: 300 LLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQAKVSHI 359 A + +AL + E AL D ++ + L+ G + G + + + Sbjct: 88 --AWNYRGVALLHLGKYEE----ALSTFDKALELNPNYAEALSNRGFVLGKLERYQEALP 141 Query: 360 LFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSLQLEPRRRKAVVIKECVDMYV 419 F++A + + A + R + E+ +EA DK+L+L P A + V + Sbjct: 142 TFDKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYR-GVALGK 200 Query: 420 PNPLKNNIKLYYKETESESHR 440 + + + K E + Sbjct: 201 LERYQEALPTFDKALELNPNN 221 Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 54/166 (32%), Gaps = 10/166 (6%) Query: 274 IYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDI 333 + R F + + + +L ++A + D + Sbjct: 405 LERYEEAFQFYDQAIKLNPNHAQAWNNRGVALGNL---------ERYEEAFQSFDKAIKL 455 Query: 334 TTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARI 393 + G+ G + + + ++QA + + A +Y + + E+ +EA Sbjct: 456 NPNHAEAWYNQGVALGKLERYQEALQSYDQAIKLNPNYAEAWYNQGVALGKLERYQEALQ 515 Query: 394 CIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETESESH 439 D++++L P +A + + + + + K + + Sbjct: 516 SYDQAIKLNPNYAEAWYNR-GFALGNLECYQEAFQSFDKAIQLNPN 560 Score = 90.9 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 23/166 (13%), Positives = 53/166 (31%), Gaps = 15/166 (9%) Query: 234 VHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTL 293 + + + +++ Q +Y G F ++ F + Sbjct: 507 LERYQEALQSYDQAIKLNPNYAEAWYNRG------FALGNLECYQEAFQSFDKAIQLNPN 560 Query: 294 KTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQ 353 E + +L Q+AL+ D + + L G+ + Sbjct: 561 DAEAWNNRGFSLRNL---------ERYQEALQSYDKAIQLNPNYAEALFNRGVALERLER 611 Query: 354 AKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICIDKSL 399 + + F++A + + +Y R +V E+ +EA D++L Sbjct: 612 YEEAFQSFDKAIQLNPNNTEAWYNRGVVLGKLERHQEAIASYDQAL 657 Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 36/244 (14%), Positives = 76/244 (31%), Gaps = 20/244 (8%) Query: 217 DELHNTSQFIIDNILQTVHKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYR 276 D+ + + + ER R + Q Y + A + R Sbjct: 144 DKALELNPNYAEALFNRGVALERLERYQEAFQSYDKALELNPNNAVAWNYRGVALGKLER 203 Query: 277 AMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTV 336 ++ E + ++L Q+AL+ + + Sbjct: 204 YQEALPTFDKALELNPNNAEVWFNRGVALVNL---------ERYQEALQSYEKALKLNPN 254 Query: 337 DGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEARICID 396 G+ G+ + + + F++A+ + + A + R + E+ +EA D Sbjct: 255 YGEAWNYRGVALESLERYQEALEAFDKARELNPNNAESWNNRGVALEKLERYQEAFQSYD 314 Query: 397 KSLQLEPRRRKAVVIKEC----VDMYVPN--PLKNNIKLYYKETESESHRVIIDNILKLK 450 +++QL +A + ++ Y IKL E+ ++R L L Sbjct: 315 QAIQLNLNDAQAWYNRGFPLGKLERYEEAFQSFDQAIKLNPNYAEAWNYR-----GLALG 369 Query: 451 QLTR 454 L R Sbjct: 370 NLER 373 Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats. Identities = 17/170 (10%), Positives = 47/170 (27%), Gaps = 20/170 (11%) Query: 269 FTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLD 328 F+ ++ R + E L ++A + D Sbjct: 570 FSLRNLERYQEALQSYDKAIQLNPNYAEALFNRGVALERL---------ERYEEAFQSFD 620 Query: 329 YVSDITTVDGKILAIMGLITGLSGQAKVSHILFEQAKIHSTDIASLYYYRALV--HFHNE 386 + + + G++ G + + + ++QA + D + R + + Sbjct: 621 KAIQLNPNNTEAWYNRGVVLGKLERHQEAIASYDQALVIKRDFYLAWINRGNLIYSLSSG 680 Query: 387 KIEEARICIDKSLQLEPRRRKAVVIKECVDMYVPNPLKNNIKLYYKETES 436 + P ++ +++ N + +K K T+ Sbjct: 681 NFLKII---------SPLAQQNSDLEKWGYQGALNSYQEGLKYIQKNTDP 721 >UniRef50_Q39G50 Transcriptional regulator, winged helix family n=11 Tax=Burkholderia RepID=Q39G50_BURS3 Length = 877 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 54/398 (13%), Positives = 110/398 (27%), Gaps = 31/398 (7%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 L E + E + I + VL +L+E+ G VV KD I+ VW + +V + Sbjct: 2 IRIGPLHVLLEKREIRLNGEPLRIGNRAFDVLELLIEAEGEVVSKDEIMRRVWAHTVVEE 61 Query: 69 ESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTS 128 +L I +LR I T +GYR + + + + A Sbjct: 62 NNLQVQIATLRKALGADRGR--IVTAAGRGYRLVAVHDEDETSALAQTSRCPAEPRILFD 119 Query: 129 LNTLDPLI-LNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRF--KPDYFVTG 185 + L + +E++ + ++ L + ++F + Sbjct: 120 PSMLVGRQCMIEEILAELERSRVVTL-VGAGGIGKTRAAEETAARVAAQFEDGIAFVPLA 178 Query: 186 RI---NQNNAVNTLYIELIDAKNLFLIAS--NHLPVDELHNTSQ------FIIDNILQTV 234 + + + + + HL L I T+ Sbjct: 179 SVSNPRFALDALASALRMAAPVGGLSLEAIVAHLTNRRLLILLDNCEHLIDAAAQIASTI 238 Query: 235 HKPERSVRLAKQDQGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLK 294 + + + + L+ P + D + Q Sbjct: 239 TNANPGISVLATSREALRIPG--------ERLHPVPPLDVPAEDDECDAILRTGAAQLFV 290 Query: 295 TECYCLLAECHMSLALHGKSELELAAQKALELLDYVSDITTVDGKILAIMGLITGLSGQA 354 T + H+SL + + + L+ L ++ L I L L Sbjct: 291 TRARAC--DPHLSLDASSLRMI-GSLCRRLDGLPLAIELAAARATALGIEVLTAHLDDHF 347 Query: 355 KVSHILFEQAKIHSTDIASLYYYRALVHFHNEKIEEAR 392 ++ F A +L + ++ E Sbjct: 348 RLLAGGFRTAL---PRHQTLKAMLDWSYRLLDESERGL 382 >UniRef50_C3KKU6 Putative transcriptional regulator n=1 Tax=Rhizobium sp. NGR234 RepID=C3KKU6_RHISN Length = 927 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 50/393 (12%), Positives = 108/393 (27%), Gaps = 37/393 (9%) Query: 9 YHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSD 68 +HF L + + + + + +L+ LL G + I+ VW + V + Sbjct: 5 FHFGSFSIAPARRSLLRNGSVIPLGSRAIDILLFLLSHPGELKTNAEIVRQVWPDTFVEE 64 Query: 69 ESLTRCIYSLRCIFEKIG-YDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTT 127 +L + +LR + I + +GYRF + + ++ Sbjct: 65 ANLRVHLSALRKALGDTQREPQFIANVPGRGYRFIAPIERRGRAVVSSPSL------LRL 118 Query: 128 SLNTLDPLILNQELVQIISNKKIDGLYTYPMAATNFCNDHISQNSFLSRFKPDYFVTGRI 187 P I +E V ++ +A + +S D V Sbjct: 119 RAERPPPRIFGRERVVATILDQLGRGRLVTVAGPGGIGKSTVARAVVSNLTSDSEV---- 174 Query: 188 NQNNAVNTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHKPERSVRLAKQD 247 L+I+L + N LI + + + + II +I + + + + Sbjct: 175 --------LWIDLSEFANGDLIPTVVASALGVLSRTDDIIRDIALALQSRALLLVMDSCE 226 Query: 248 QGYKNHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECH-- 305 + E L S +R+ + E A Sbjct: 227 HVVVSAAEFVENLLADTANLRILATSREPLRAEGERVHRLLPLDVPPPEAAAEKALTWPA 286 Query: 306 ---------MSLALHGKSELEL----AAQKALELLDYVSDITTVDGKILAIMGLITGLSG 352 L + ++ + L+ + ++ + + + L L+ Sbjct: 287 VQLFVDRADACLGGYELTDDDAPYVVEICTRLDGIALAIELAAGRLEAIGVHALSRSLTN 346 Query: 353 QAKVSHILFEQAKIHSTDIASLYYYRALVHFHN 385 KV A +L + Sbjct: 347 GFKVLTRGRRTAL---PRHQTLRATLDWSYLLL 376 >UniRef50_B1KPW9 Transcriptional regulator, CadC n=1 Tax=Shewanella woodyi ATCC 51908 RepID=B1KPW9_SHEWM Length = 693 Score = 109 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 1/99 (1%) Query: 7 FSYHFLEGLTLTEDGILTQGNEQVYIPQKELGVLIVLLESAGHVVLKDMIIESVWKNIIV 66 ++ F L L + + I K + VL LL G VV ++ I +S+W + +V Sbjct: 1 MTFQFANCLVFPAHNKLEIDGQSIKIEPKIMQVLCFLLRHQGQVVSREFIAQSLWPDTVV 60 Query: 67 SDESLTRCIYSLRCIFEKIGY-DRCIETIYRKGYRFSGQ 104 + +TR I+ LR I + IETI RKGY F Sbjct: 61 GLDVITRAIFELRKILNDSAQSPQFIETIARKGYCFIYP 99 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.311 0.132 0.328 Lambda K H 0.267 0.0404 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,032,333,528 Number of Sequences: 3077464 Number of extensions: 77803638 Number of successful extensions: 468134 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 12414 Number of HSP's successfully gapped in prelim test: 9487 Number of HSP's that attempted gapping in prelim test: 355019 Number of HSP's gapped (non-prelim): 68797 length of query: 458 length of database: 1,040,396,356 effective HSP length: 132 effective length of query: 326 effective length of database: 634,171,108 effective search space: 206739781208 effective search space used: 206739781208 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 95 (41.2 bits)