107 c3qkyA_ Probab=99.14   E-value=2e-08  Score=68.32  Aligned_columns=191  Identities=13%

Q ss_pred             CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             93679999989999841053337999999999985101573201699999999999653100002448999999999999
Q batch____       252 NHYLSDEMLAGKKELYDFTPESIYRAMTIFDRLQNKSDIQTLKTECYCLLAECHMSLALHGKSELELAAQKALELLDYVS  331 (458)
Q Consensus       252 ~~~a~~~~Lrg~~~~~~~t~~~~~~A~~~~~~a~~a~~~~p~~a~a~a~la~~~~~~~~~g~~~~~~~~~~A~~~~~kAl  331 (458)
                      +...-.+|..|..++..   +.+..|+..|++++...|.+|..+.++..+|.++...+..         ++|++.+++++
T Consensus         2 ~~~pe~ly~~g~~~~~~---g~y~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~---------~~A~~~~~~~~   69 (251)
T c3qkyA_           2 HSSPQEAFERAMEFYNQ---GKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEY---------LLAASEYERFI   69 (251)
T ss_dssp             CSSHHHHHHHHHHHHHT---TCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCH---------HHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC---------HHHHHHHHHHH
T ss_conf             68989999999999980---9989999999999995699968999999999999854973---------01079999999


Q ss_pred             HHCCCCHH---HHHHHHHHHHHHCCC-------------------------HHHHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             60555179---999999999972360-------------------------88999999999843899899999999999
Q batch____       332 DITTVDGK---ILAIMGLITGLSGQA-------------------------KVSHILFEQAKIHSTDIASLYYYRALVHF  383 (458)
Q Consensus       332 ~ldp~~~~---a~~~lg~~~~~~g~~-------------------------~~A~~~~~~Al~l~P~~~~~~~~~g~~~~  383 (458)
                      +++|.++.   ++..+|..+...++.                         ..+...+.......+.........+....
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  149 (251)
T c3qkyA_          70 QIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYE  149 (251)
T ss_dssp             HHCTTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             82877426999999999999963254564422125547899999995778499999999888632542223456787544


Q ss_pred             HCCCHHHHHHHHHHHHHCCCCCHHHH------------HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             87998899999999985069986789------------999999985112289999999977630568779999998999
Q batch____       384 HNEKIEEARICIDKSLQLEPRRRKAV------------VIKECVDMYVPNPLKNNIKLYYKETESESHRVIIDNILKLKQ  451 (458)
Q Consensus       384 ~~g~~~eA~~~~~~Al~l~P~~~~a~------------~~~l~~~~~~~~~~~~Ai~~y~k~~~~~~~~~i~~~~~~l~~  451 (458)
                      ..+.+..+...+.+.+...|......            +..++..+...+++++|++.|.+..+..|+++.......+.+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~a~~~~~  229 (251)
T c3qkyA_         150 RRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYT  229 (251)
T ss_dssp             HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHCTTCTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf             44322113679887543222212248999602110058889999972247979999999999995899966999999999


Q ss_pred             HHH
Q ss_conf             998
Q batch____       452 LTR  454 (458)
Q Consensus       452 ~~~  454 (458)
                      -..
T Consensus       230 ~~~  232 (251)
T c3qkyA_         230 RAR  232 (251)
T ss_dssp             HHH
T ss_pred             HHH
T ss_conf             999