Phyre 2 alignment of P0ABK9 with c2c1uB_

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Job Description | P0ABK9
Confidence | 63.23% | Date | Thu Jan 5 11:15:44 GMT 2012
Rank | 64 | Aligned Residues | 28
% Identity | 25% | Template | c2c1uB_
PDB info | PDB header:oxidoreductase | Chain: B: PDB Molecule:di-haem cytochrome c peroxidase; | PDBTitle: crystal structure of the di-haem cytochrome c peroxidase2 from paracoccus pantotrophus - oxidised form
Resolution | 1.95 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | K | D | G | E | D | G | Y | F | H | G | K | W | A | R | G | G | P | E | I | V | N | N | L | G | C | A | D | C | H | N | T | A | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | E | L | G | K | V | L | F | F | D | P | R | M | S | S | S | G | L | . | . | . | . | . | I | S | C | Q | T | C | H | N | V | G | L
Template Known Secondary structure |  |  |  |  |  |  |  |  |  |  | G | G | G | S | T | T | S | S | . | . | . | . | . |  |  |  |  |  |  | S | B | T | T | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |  |  |  |  |  | . | . | . | . | . | . | . | 70 | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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