Phyre 2 alignment of P0ABK9 with c1jniA_

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Job Description | P0ABK9
Confidence | 91.80% | Date | Thu Jan 5 11:15:44 GMT 2012
Rank | 43 | Aligned Residues | 41
% Identity | 29% | Template | c1jniA_
PDB info | PDB header:oxidoreductase | Chain: A: PDB Molecule:diheme cytochrome c napb; | PDBTitle: structure of the napb subunit of the periplasmic nitrate2 reductase from haemophilus influenzae.
Resolution | 1.25 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | C | A | D | C | H | N | T | A | S | P | E | F | A | K | G | K | P | E | L | T | L | S | R | P | Y | A | A | R | A | M | E | A | I | G | K | P | F | E | K | A | G | R | F | D | Q | Q | S | M | V | C | G | Q | C | H | V
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | C | L | N | C | H | S | P | E | N | S | R | L | S | . | . | . | G | A | T | R | I | S | P | T | H | F | M | D | . | . | . | R | D | G | K | . | . | . | . | . | . | . | . | V | P | R | R | Y | F | C | L | Q | C | H | V
Template Known Secondary structure |  | T |  |  |  |  | S | T | T | T |  |  |  |  | . | . | . |  |  |  |  |  |  | G | G | G | T |  |  | . | . | . | T | T | S |  | . | . | . | . | . | . | . | . |  |  |  | S |  |  | G | G | G | T |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 |  |  |  | . | . | . | . | . | . | . | . | . | 80 | . | . |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | 90 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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