Phyre 2 alignment of P33595 with c3mq0A_

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Job Description | P33595
Confidence | 89.23% | Date | Thu Jan 5 11:52:20 GMT 2012
Rank | 160 | Aligned Residues | 57
% Identity | 23% | Template | c3mq0A_
PDB info | PDB header:transcription repressor | Chain: A: PDB Molecule:transcriptional repressor of the blcabc operon; | PDBTitle: crystal structure of agobacterium tumefaciens repressor blcr
Resolution | 1.79 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | P | S | A | R | L | Q | Q | Q | F | I | R | L | W | Q | C | C | E | G | K | S | Q | D | T | T | L | N | E | L | A | A | L | L | S | C | S | R | R | H | M | R | T | L | L | N | T | M | Q | D | R | G | W | L | T | W | E | A | E | V | G | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template Sequence |  | D | T | V | P | A | L | R | R | A | V | R | I | L | D | L | V | A | G | S | P | R | D | L | T | A | A | E | L | T | R | F | L | D | L | P | S | . | . | A | H | G | L | L | A | V | M | T | E | L | D | L | L | A | R | S | A | D | . | G | T
Template Known Secondary structure |  | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | . | S |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . |  |  | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |  | . | 80

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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