Phyre 2 alignment of Q46892 with c1bm4A_

Return to main results | Retrieve Phyre Job Id

Job Description | Q46892
Confidence | 2.09% | Date | Thu Jan 5 12:35:34 GMT 2012
Rank | 33 | Aligned Residues | 12
% Identity | 8% | Template | c1bm4A_
PDB info | PDB header:viral protein | Chain: A: PDB Molecule:protein (moloney murine leukemia virus capsid); | PDBTitle: momlv capsid protein major homology region peptide analog
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 424 | . | . | . | . | . | 430 | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | S | V | A | D | G | L | K | T | W | T | V | L
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | L | K | E | A | Y | R | R | Y | T | P | Y
Template Known Secondary structure |  |  |  |  |  |  |  |  |  | T | S |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 21 | . | . | . | . | . | . | . | . | 30 | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys |
Disclaimer
Terms and Conditions