 |
| Job Description | Q46892 | | Confidence | 1.59% | Date | Thu Jan 5 12:35:34 GMT 2012 |
| Rank | 64 | Aligned Residues | 22 |
| % Identity | 9% | Template | c2rddB_ |
| PDB info |
PDB header:membrane protein/transport protein | Chain: B: PDB Molecule:upf0092 membrane protein yajc; |
PDBTitle: x-ray crystal structure of acrb in complex with a novel2 transmembrane helix.
|
| Resolution | 3.50 Å |
|
|   |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
S | T | I | T | L | L | C | I | A | L | A | G | V | I | M | L | L | L | L | V | I | K |
| Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|
|
|   |
|
|
| Template Sequence |   |
S | P | M | S | L | I | L | M | L | V | V | F | G | L | I | F | Y | F | M | I | L | R |
| Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |  |  |
| Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|