248 d1yuba_ Probab=98.99   E-value=5.6e-10  Score=72.92  Aligned_columns=115  Identities=10%

Q ss_pred             EECCHHHCCCCCCCCCH-HHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             64102420112677322-89998623489975999658874013665420023235446889987632000000011122
Q batch____         3 IRDENYFTDKYELTRTH-SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLH   81 (197)
Q Consensus         3 ~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~vLDiGCG~G~~~~~la~~g~~v~~~D~s~~~i~~~~~~~~~~~~~~~~   81 (197)
                      |-.+.-|.|.+..++.- .++++.++..++.+|||+|||+|.++..++..+.+++++|+|+.++..++++....  .++.
T Consensus         1 ~~~~~k~gQnFl~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lT~~L~~~~~~v~aiEid~~l~~~l~~~~~~~--~~~~   78 (245)
T d1yuba_           1 MNKNIKYSQNFLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLN--TRVT   78 (245)
T ss_dssp             CCCCCCSCCCBCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTC--SEEE
T ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCC--CCEE
T ss_conf             99776535443779899999999658887888999779873899999861395499935999999999742568--9669


Q ss_pred             CCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH
Q ss_conf             22222222222343200111033003898899999999
Q batch____        82 TRVVDLNNLTFDRQYDFILSTVVLMFLEAKTIPGLIAN  119 (197)
Q Consensus        82 ~~~~~~~~~~~~~~~d~v~~~~~l~~~~~~~~~~~l~~  119 (197)
                      ...+|.......+.....+.+..-.++..+-...++..
T Consensus        79 ii~~D~l~~~~~~~~~~~vv~NlPY~iss~il~~~l~~  116 (245)
T d1yuba_          79 LIHQDILQFQFPNKQRYKIVGNIPYHLSTQIIKKVVFE  116 (245)
T ss_dssp             ECCSCCTTTTCCCSSEEEEEEECCSSSCHHHHHHHHHH
T ss_pred             EEECCHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHC
T ss_conf             99743210888877833798408500013899999731