BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (225 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=... 361 1e-98 UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Ente... 187 3e-46 UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C... 168 1e-40 UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Kl... 147 2e-34 UniRef50_B1EMV5 Transcriptional activator protein BglJ n=1 Tax=E... 72 1e-11 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 62 1e-08 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 62 1e-08 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 62 1e-08 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 59 2e-07 UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=... 58 3e-07 UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece... 57 6e-07 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 57 7e-07 UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 57 7e-07 UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ... 56 1e-06 UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud... 55 1e-06 UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellov... 55 2e-06 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 55 2e-06 UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin... 55 3e-06 UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa... 54 3e-06 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 54 3e-06 UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ... 54 5e-06 UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ... 53 7e-06 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 53 9e-06 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 52 1e-05 UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=... 52 2e-05 UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=S... 52 2e-05 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 52 2e-05 UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa... 52 2e-05 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 51 2e-05 UniRef50_C1M8K4 LuxR transcriptional regulator n=2 Tax=Citrobact... 51 3e-05 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 51 3e-05 UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa... 51 4e-05 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 51 4e-05 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 50 4e-05 UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, par... 50 5e-05 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 50 5e-05 UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa... 50 5e-05 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 50 6e-05 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 50 7e-05 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 50 7e-05 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 50 8e-05 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 50 8e-05 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 49 9e-05 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 49 1e-04 UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR fa... 49 1e-04 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 49 1e-04 UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa... 49 1e-04 UniRef50_C3QQ50 Transcriptional regulator n=2 Tax=Bacteroides Re... 49 1e-04 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 49 1e-04 UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa... 49 2e-04 UniRef50_C6P0R1 Two component transcriptional regulator, LuxR fa... 49 2e-04 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 49 2e-04 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 49 2e-04 UniRef50_Q04UI4 Receiver component of a two-component response r... 49 2e-04 UniRef50_A1VAY8 Two component transcriptional regulator, LuxR fa... 49 2e-04 UniRef50_B1T388 Two component transcriptional regulator, LuxR fa... 48 2e-04 UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ... 48 2e-04 UniRef50_UPI000197BDC0 two component LuxR family transcriptional... 48 2e-04 UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa... 48 2e-04 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_A0NVX8 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10... 48 3e-04 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 48 3e-04 UniRef50_A3U840 DNA-binding response regulator, LuxR family prot... 47 3e-04 UniRef50_Q391P2 Two component transcriptional regulator, LuxR fa... 47 3e-04 UniRef50_UPI0001744DFC response regulator with a HTH DNA-binding... 47 4e-04 UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 47 4e-04 UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=... 47 4e-04 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 47 4e-04 UniRef50_Q47I89 Two component transcriptional regulator, LuxR fa... 47 4e-04 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 47 4e-04 UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 ... 47 4e-04 UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR fa... 47 4e-04 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 47 4e-04 UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 47 4e-04 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseu... 47 5e-04 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 47 5e-04 UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_C6WIE2 Transcriptional regulator, LuxR family n=1 Tax=A... 47 5e-04 UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammap... 47 5e-04 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 47 5e-04 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_Q2T904 Capsula synthesis response regulator transcripti... 47 5e-04 UniRef50_B7GTT1 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 47 5e-04 UniRef50_C8WK28 Transcriptional regulator, LuxR family n=1 Tax=E... 47 5e-04 UniRef50_C7LUF3 Two component transcriptional regulator, LuxR fa... 47 5e-04 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 47 6e-04 UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa... 47 6e-04 UniRef50_C4LED9 Transcriptional regulator, LuxR family n=1 Tax=T... 47 7e-04 UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 46 7e-04 UniRef50_C5S952 Two component transcriptional regulator, LuxR fa... 46 7e-04 UniRef50_Q7UXT1 Response regulator n=1 Tax=Rhodopirellula baltic... 46 8e-04 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 46 8e-04 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 46 0.001 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 46 0.001 UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersini... 46 0.001 UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14... 46 0.001 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 46 0.001 UniRef50_UPI00016AA17B two component transcriptional regulator, ... 45 0.001 UniRef50_Q5P6A6 Two-component response regulator n=4 Tax=Rhodocy... 45 0.001 UniRef50_UPI00018267FE transcriptional regulator, LuxR family pr... 45 0.001 UniRef50_C3K5C3 Putative response regulator, receiver domain n=1... 45 0.001 UniRef50_Q0S8Z3 Response regulator, two-component system n=6 Tax... 45 0.001 UniRef50_A5FJ00 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta... 45 0.002 UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece... 45 0.002 UniRef50_A5EKH3 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ... 45 0.002 UniRef50_UPI0001C32085 transcriptional regulator, LuxR family n=... 45 0.002 UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n... 45 0.002 UniRef50_B9XRD7 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_B2JQA9 Two component transcriptional regulator, LuxR fa... 45 0.002 UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh... 45 0.002 UniRef50_B4ELF5 Two-component regulatory system, response regula... 45 0.002 UniRef50_D1ADV5 Transcriptional regulator, LuxR family n=1 Tax=T... 45 0.002 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 45 0.002 UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobact... 45 0.002 UniRef50_Q7NVE2 Capsula synthesis response regulator transcripti... 45 0.002 UniRef50_C7C553 Putative uncharacterized protein n=1 Tax=Enterob... 45 0.002 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 45 0.002 UniRef50_D1R7I4 Putative uncharacterized protein n=1 Tax=Parachl... 45 0.003 UniRef50_Q9XAT8 ThcG n=1 Tax=Rhodococcus erythropolis RepID=Q9XA... 45 0.003 UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa... 45 0.003 UniRef50_A8GBA0 Two component transcriptional regulator, LuxR fa... 44 0.003 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 44 0.003 UniRef50_B4SIR4 Two component transcriptional regulator, LuxR fa... 44 0.003 UniRef50_Q7MV58 Transcriptional regulator, LuxR family n=2 Tax=P... 44 0.003 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 44 0.003 UniRef50_A6V170 Probable two-component response regulator n=1 Ta... 44 0.003 UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Ente... 44 0.003 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 44 0.003 UniRef50_C7ML75 Response regulator containing a CheY-like receiv... 44 0.003 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 44 0.003 UniRef50_A0QW50 Two-component system response regulator n=1 Tax=... 44 0.003 UniRef50_Q31FU6 Two component transcriptional regulator, LuxR fa... 44 0.003 UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=S... 44 0.003 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 44 0.004 UniRef50_C5NV86 Oxygen regulatory protein NreC n=1 Tax=Gemella h... 44 0.004 UniRef50_Q10550 Putative HTH-type transcriptional regulator Rv08... 44 0.004 UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Bu... 44 0.004 UniRef50_D2QUB6 Two component transcriptional regulator, LuxR fa... 44 0.004 UniRef50_D2SB03 Two component transcriptional regulator, LuxR fa... 44 0.004 UniRef50_Q2W0G1 Response regulator containing a CheY-like receiv... 44 0.004 UniRef50_B5I095 Two component transcriptional regulator n=1 Tax=... 44 0.004 UniRef50_B0MWF4 Putative uncharacterized protein n=1 Tax=Alistip... 44 0.004 UniRef50_C7M954 Transcriptional regulator, LuxR family n=2 Tax=C... 44 0.005 UniRef50_B5HBI1 Two-component system response regulator n=23 Tax... 44 0.005 UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR fa... 44 0.005 UniRef50_B1VE62 Two-component system response regulator n=3 Tax=... 44 0.005 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 44 0.005 UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=R... 44 0.005 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 44 0.005 UniRef50_B1ZJJ2 Transcriptional regulator, LuxR family n=7 Tax=M... 44 0.005 UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus s... 44 0.006 UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter... 44 0.006 UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Rose... 44 0.006 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 44 0.006 UniRef50_A0JU95 Transcriptional regulator, LuxR family n=1 Tax=A... 44 0.006 UniRef50_B4D016 Two component transcriptional regulator, LuxR fa... 44 0.006 UniRef50_Q1LMP7 Two component transcriptional regulator, LuxR fa... 44 0.006 UniRef50_A6ARQ2 Transcriptional regulator, LuxR family protein n... 44 0.006 UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis Re... 43 0.006 UniRef50_B7UVM8 Probable transcriptional regulator n=6 Tax=Pseud... 43 0.007 UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin... 43 0.007 UniRef50_B8FQ55 Transcriptional regulator, LuxR family n=2 Tax=D... 43 0.007 UniRef50_C5AJ00 DNA-binding HTH domain-containing protein n=13 T... 43 0.007 UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba... 43 0.007 UniRef50_B9Z3N9 Two component transcriptional regulator, LuxR fa... 43 0.007 UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS 43 0.007 UniRef50_C1M8K7 Predicted protein n=2 Tax=Citrobacter RepID=C1M8... 43 0.007 UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa... 43 0.007 UniRef50_Q21Y82 Two component transcriptional regulator, LuxR fa... 43 0.007 UniRef50_A4AJ82 Putative LuxR-family transcriptional regulator n... 43 0.008 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 43 0.008 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 43 0.008 UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei... 43 0.008 UniRef50_A8Y5U6 Putative response regulator n=1 Tax=Prosthecobac... 43 0.008 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 43 0.008 UniRef50_B1ZI39 Two component transcriptional regulator, LuxR fa... 43 0.008 UniRef50_Q89XB5 Transcriptional regulatory protein n=1 Tax=Brady... 43 0.008 UniRef50_D0LDI8 Regulatory protein LuxR n=1 Tax=Gordonia bronchi... 43 0.009 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 43 0.009 UniRef50_A9HE32 Putative transcriptional regulatory protein n=1 ... 43 0.009 UniRef50_C0YJJ8 LuxR family transcriptional regulator n=1 Tax=Ch... 43 0.009 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 43 0.009 UniRef50_B3E9L1 Two component transcriptional regulator, LuxR fa... 43 0.009 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 43 0.009 UniRef50_B9Z8S5 Two component transcriptional regulator, LuxR fa... 43 0.009 UniRef50_B4WXQ1 Transcriptional regulator, LuxR family protein n... 43 0.009 UniRef50_D2Q2Q4 Transcriptional regulator, LuxR family n=2 Tax=K... 43 0.009 UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus ... 43 0.010 UniRef50_A1K8Y3 Two-component response regulator n=6 Tax=Proteob... 43 0.010 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 43 0.010 UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa... 43 0.010 UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=G... 43 0.010 UniRef50_A6CG81 DNA-binding response regulator, LuxR family prot... 43 0.010 UniRef50_B4D4R4 Two component transcriptional regulator, LuxR fa... 43 0.010 UniRef50_A9BU27 Transcriptional regulator, LuxR family n=1 Tax=D... 42 0.010 UniRef50_C5BZU7 Two component transcriptional regulator, LuxR fa... 42 0.011 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 42 0.011 UniRef50_UPI0001C31904 transcriptional regulator, LuxR family n=... 42 0.011 UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 ... 42 0.011 UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa... 42 0.011 UniRef50_A7JTF8 Tetrathionate reductase regulon response regulat... 42 0.011 UniRef50_UPI0001C33E7F two component LuxR family transcriptional... 42 0.012 UniRef50_C7PX21 Two component transcriptional regulator, LuxR fa... 42 0.012 UniRef50_A3VTU0 Two-component response regulator n=1 Tax=Parvula... 42 0.012 UniRef50_Q1IY93 Transcriptional regulator, LuxR family n=1 Tax=D... 42 0.012 UniRef50_C0Z8M0 Two-component response regulator n=1 Tax=Breviba... 42 0.012 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 42 0.012 UniRef50_UPI0000382D84 COG2909: ATP-dependent transcriptional re... 42 0.012 UniRef50_C6VU12 Transcriptional regulator, LuxR family n=1 Tax=D... 42 0.012 UniRef50_C2KQV5 Response regulator n=2 Tax=Mobiluncus mulieris R... 42 0.012 UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular... 42 0.013 UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=... 42 0.013 UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepI... 42 0.013 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 42 0.013 UniRef50_D2U148 Two-component system, NarL family, invasion resp... 42 0.013 UniRef50_C0N928 Putative uncharacterized protein n=1 Tax=Methylo... 42 0.013 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 42 0.013 UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleu... 42 0.014 UniRef50_C0BE05 Putative uncharacterized protein n=1 Tax=Coproco... 42 0.014 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 42 0.014 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 42 0.014 UniRef50_C5CJZ9 Two component transcriptional regulator, LuxR fa... 42 0.015 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 42 0.015 UniRef50_Q1LDC8 Two component transcriptional regulator, LuxR fa... 42 0.015 UniRef50_A1SPZ4 Regulatory protein, LuxR n=1 Tax=Nocardioides sp... 42 0.015 UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Er... 42 0.015 UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25... 42 0.015 UniRef50_Q2SEA9 ATP-dependent transcriptional regulator n=1 Tax=... 42 0.015 UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa... 42 0.016 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 42 0.016 UniRef50_C7BU28 Two component transcriptional regulator, luxr fa... 42 0.016 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 42 0.016 UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa... 42 0.016 UniRef50_B8EBA2 Two component transcriptional regulator, LuxR fa... 42 0.016 UniRef50_C4UB72 Two-component response regulator n=1 Tax=Yersini... 42 0.016 UniRef50_UPI0001BC30E6 two-component system, NarL family, respon... 42 0.017 UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa... 42 0.017 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 42 0.017 UniRef50_A0M543 Two-component system response regulator n=3 Tax=... 42 0.018 UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1 ... 42 0.018 UniRef50_D1ACQ9 Transcriptional regulator, LuxR family n=1 Tax=T... 42 0.019 >UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=cellular organisms RepID=BGLJ_ECOLI Length = 175 Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 51 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL Sbjct: 1 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 60 Query: 111 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM Sbjct: 61 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 120 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 225 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY Sbjct: 121 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 175 >UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Enterobacter RepID=A4W681_ENT38 Length = 211 Score = 187 bits (475), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 95/192 (49%), Positives = 131/192 (68%) Query: 19 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78 MS+IG+E F + PY+LH + + +SF A++ I F +VI+S S R ERR L+ + Sbjct: 1 MSAIGLEHFFTTVSFRPYQLHLFKNFDSFNTALTYIPFFSVIYSLSDAREERRNCLAYMR 60 Query: 79 ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138 ELA K +R+++A D++EARLIG LSPS L G++SK+S+L ++L L+ Q Sbjct: 61 ELAFKHGAIQRIILASDEVEARLIGQLSPSRLHGIISKSSSLVDLRRQLITLLSETGQVN 120 Query: 139 DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 W+ +R LSPTER +LR+MS G S+ +IAEQL+RNIKTIRAHK+N M KLGV+ Sbjct: 121 SNAFTHWHGCHTRMLSPTERTVLRYMSSGLSIPEIAEQLERNIKTIRAHKYNAMLKLGVN 180 Query: 199 SDAGLLEAADIL 210 SD GLL+AADIL Sbjct: 181 SDVGLLDAADIL 192 >UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter RepID=C9XUX9_CROTZ Length = 200 Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 19 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78 MS G+ SL + +L ++ +F A++ F+ VIFS R RR+ L ++ Sbjct: 1 MSGEGVRSLLQVNNSTSCRLEIFSDHHAFIQALTYRHFSTVIFSLEGTREHRRDCLQFVS 60 Query: 79 ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138 E+A +PR +R+V+ ++ EA+LI LSP+PL G++ K+ TL F EL +++ + + Sbjct: 61 EMAKAWPRMKRIVMVNNVNEAKLISQLSPTPLQGIIDKSETLSRFTDELMSAMSDSARVS 120 Query: 139 DRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 + + WY +Q SR LSPTER ILR+++ GYS++QIA +L+RNIKTIRAHKFN M KLGV Sbjct: 121 ESPHKIWYASQGSRLLSPTERIILRYLTDGYSVSQIACRLERNIKTIRAHKFNAMLKLGV 180 Query: 198 SSDAGLLEAADILL 211 +DAGLL AADILL Sbjct: 181 HTDAGLLNAADILL 194 >UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Klebsiella RepID=C4X2X4_KLEPN Length = 224 Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 17/211 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 R+VA++EKCVM+ + +F + Y +H + + + A ++ +IFS S RS Sbjct: 8 RHVAIVEKCVMTEMAWRYIFSREDNRRYHIHLFKNVSMLRAAEIPFPWSTIIFSLSGSRS 67 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R E L + E+A P + +++A+++ E LIG L P+ L G+L+K++ QE Sbjct: 68 SRAESLLFVHEMARCRPEVQTIILANNESEMHLIGHLMPACLHGILNKSAPRRGL-QECL 126 Query: 129 LSL------NGVRQATDR--LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 L L +G Q DR N+ LSPTE ILR+MS GYS++ IA QL RN Sbjct: 127 LQLLDNHHLSGSEQFCDREACND--------PLSPTEHAILRYMSWGYSLSDIAIQLNRN 178 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 IKTIRAHKFN M+KLGV SD GLL AADILL Sbjct: 179 IKTIRAHKFNAMTKLGVRSDIGLLNAADILL 209 >UniRef50_B1EMV5 Transcriptional activator protein BglJ n=1 Tax=Escherichia albertii TW07627 RepID=B1EMV5_9ESCH Length = 44 Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 34/36 (94%), Positives = 35/36 (97%) Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARL 101 MR+ERREGLSCL ELAIKFPRTRRLVIADDDIEARL Sbjct: 1 MRTERREGLSCLNELAIKFPRTRRLVIADDDIEARL 36 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 24/159 (15%) Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA--DDDI---EARLIGSLSPSPLDGV 113 VI F+ +GL+ LT + +P R +V+ D+ + R G+L+ V Sbjct: 52 VITDFAMPEQPAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALA------V 105 Query: 114 LSKASTLEIFHQELFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFM 164 LSK L+ EL +L V Q + + R LSP E E++R Sbjct: 106 LSKRGDLD----ELPRALAAVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLC 161 Query: 165 SRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 + G +MT IA + R+IKT+ HK N M KLG+ SD L Sbjct: 162 ATGMTMTDIANRYGRSIKTVSTHKHNAMGKLGLKSDVDL 200 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%) Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 +I FS + +G++ + +L K+P +V+ ++ +L ++G+L K S Sbjct: 53 LITDFSMPNDDNVDGMAMIKQLRRKYPNLPIIVLTQVH-NLGVLQALMQIGINGLLLKKS 111 Query: 119 TLEIFHQELFLSLNG---VRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQ 172 + + L+G + A L N+ INQ T LS E E++R ++ G S+TQ Sbjct: 112 VIAELANTVKKVLSGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQ 171 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +A L R++KTI K N M KLG+ SD+ L A Sbjct: 172 VASYLNRSVKTISTQKTNAMQKLGLKSDSELFHYA 206 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 20/152 (13%) Query: 70 RREGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLE------ 121 R +G+ LTE+ +++ + + +V+ +D+ LI + S G + KA+ E Sbjct: 47 RLDGIQVLTEIKLRYEQAKVIVLTMHEDEDYVTLIMNAGAS---GYVPKAAVDEELYTAI 103 Query: 122 --IFHQELFLSLNGVRQATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSMTQIAE 175 + L+L + RL N+ +SR LSP ERE+L+F+ +G+S+++IA+ Sbjct: 104 DSVMDGYLYLRPKEISTMLKRLQNE---TESRNPYVILSPREREVLQFLVKGFSLSEIAQ 160 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L +IKT+ HK +++KL +S + L++ A Sbjct: 161 ELTISIKTVDTHKTRMLNKLNLSKKSELVQYA 192 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%) Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 ++ FS +GL+ LT L +FP R +V+ + A L+ S+ + G+++K Sbjct: 52 LVTDFSMPCGATPDGLAMLTSLRQRFPHVRVVVLTMLE-NAGLMVSMQDVGVLGIVNKRD 110 Query: 119 TLE--------IFHQELFLSLN---GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167 L F + LS + +RQ +++ + + +R LSP E E++R G Sbjct: 111 DLSELPAVIAAAFRRRRLLSTSVHEDLRQWEHQMSQR---HAARQLSPRETEVVRMYVNG 167 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 S +++A L R+I TI K N M KLGVS+DA L + A Sbjct: 168 MSTSEMARHLHRSINTISTQKTNAMRKLGVSNDAELFDYA 207 >UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK Length = 220 Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 30/55 (54%), Positives = 37/55 (67%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 TLS E EI+R GY +T+IAE+L R+ KTI A K M KLGV+SDA L+ A Sbjct: 150 TLSKRETEIVRLFREGYKVTEIAEKLHRSKKTISAQKLAAMRKLGVTSDAELIRA 204 >UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM Length = 199 Score = 56.6 bits (135), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 15/149 (10%) Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------IF 123 +GL+ L L FP+ R +V+ D + L+ L + G++SK L+ + Sbjct: 53 DGLALLDYLGAHFPQLRIVVMTGLD-QPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMAAY 111 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 FLS + V + DR + ++ LSP E+E++ G S+ +IA +L R +T Sbjct: 112 ANRRFLSPS-VAEILDRREQR----RATALSPREQEVVELFIAGLSVAEIARKLDRKKQT 166 Query: 184 IRAHKFNVMSKLGVSSDAGLLE-AADILL 211 + K N M KLG+ DA LL AAD+ L Sbjct: 167 VSTQKNNAMRKLGIERDAELLTFAADLGL 195 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 26/155 (16%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 GL ++++ FP T+ L++ D E L L S G + K S ++L L++ Sbjct: 62 GLIATSKISESFPDTKILILTMFDDEEYLFHVLK-SGAKGYILKNSP----DEQLILAVR 116 Query: 133 GVRQA--------TDRLNNQWYINQSRT------------LSPTEREILRFMSRGYSMTQ 172 V Q T L N+ ++NQS+T LS E EIL +++GY Sbjct: 117 TVYQGETYVDMKLTTSLVNE-FVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKD 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IAE+L ++KT+ AHK ++M+KL + S L+E A Sbjct: 176 IAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 56.6 bits (135), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 8/113 (7%) Query: 92 IADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR 151 + D DIE ++ +P+ L L+ + F E V + ++++ Y + Sbjct: 98 VLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPE------SVSRLLEKISAGGY--GDK 149 Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 LSP E E+LR + G+ +T+IA++L R+IKTI + K + M KLGV +D LL Sbjct: 150 RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202 >UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria RepID=Q4KAJ3_PSEF5 Length = 217 Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 21/147 (14%) Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +G+ +T L FPR + LV+ ++ +L + VL K + EL +L Sbjct: 68 DGIRLVTYLIRHFPRVQVLVLTMMS-NPMIVAALYDIGVRSVLPKRHDMS----ELLSAL 122 Query: 132 NGVRQATDRLNNQWYINQSR--------------TLSPTEREILRFMSRGYSMTQIAEQL 177 VRQ R+++ + Q+ +L+P E E+LR RG SM QIA L Sbjct: 123 ENVRQG--RIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAANL 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLL 204 KR++KT+ A K + + KL + SD L+ Sbjct: 181 KRSVKTVSAQKISAIRKLNLDSDQALV 207 >UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7V7K0_PSEA8 Length = 212 Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/57 (43%), Positives = 42/57 (73%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 + + LSPTE +ILR ++RG ++++IA++ R++ TI HK N M K+G++SDA L+ Sbjct: 144 HTGKPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDAELI 200 >UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6ML78_BDEBA Length = 204 Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 16/125 (12%) Query: 83 KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--------FLSLNGV 134 KF + R+++ +E+ ++ + SP+ ++SK S LE + L FLS N + Sbjct: 74 KFNASIRVMVFTQSLESAILKTYWNSPVVAIVSKGSLLEDVPKALLALKRGERFLSAN-I 132 Query: 135 RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194 R+A D+ + L+ E E+ R ++ G S +IAE L + +TI+ HK N+M+K Sbjct: 133 REAIDKAGVE-------VLTKREIEVARMIATGRSNKEIAEVLGCSDQTIKTHKTNIMTK 185 Query: 195 LGVSS 199 LGV++ Sbjct: 186 LGVNT 190 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 26/51 (50%), Positives = 38/51 (74%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 +SP ERE+L+ ++ G QIAE+L +IKT+ AH+ N+M+KL +SS AGL Sbjct: 152 ISPREREVLQLIAEGVKTRQIAERLFVSIKTVEAHRRNIMNKLMISSVAGL 202 >UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia RepID=D0FMI8_ERWPY Length = 214 Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 8/153 (5%) Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 FS S+ RS +G + + L+ +FP + +V+ ++ + ++SK+ + Sbjct: 58 FSLSSKRSAI-DGFAKIRALSGRFPLVK-IVLLTSQKNIAILRKTCDYGVKAIVSKSDPV 115 Query: 121 E--IFHQELFLSLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIA 174 E + ++ +G ++ N + Y+++S L+P E E++R S GY++++IA Sbjct: 116 EDTVIACHHVMNQSGYYFSSSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + R I T+ K+N M +LGVSS+ L+ A Sbjct: 176 RRQNRTISTVSTQKYNAMRRLGVSSNVELIRYA 208 >UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8 Length = 217 Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 37/53 (69%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 R LSP + E++R RG S+++IA L R+++T+ K + M+KLGVS+D GL Sbjct: 148 RHLSPRQSEVIRMFVRGKSISEIARDLGRDVRTVSRQKRDAMAKLGVSNDPGL 200 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%) Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122 R +G+ + + P R LV+ + +L+ VL AS E + Sbjct: 62 RMDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESV 121 Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQI 173 +++LS GV A + Y+N +R TL+P E+EI + ++ GY +I Sbjct: 122 LGGKIYLS-PGVSDAVVK----GYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREI 176 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA---DILLCMR 214 AE L ++KT+ H+ N+M KLGV S A L A I+L MR Sbjct: 177 AEMLVVSVKTVEKHRSNLMQKLGVHSAAELRALALERGIILRMR 220 >UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14 Length = 212 Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%) Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-ASTLEIF 123 AM + RR+GL L L P + +V+ + ++G L+ + GV+ K A E+ Sbjct: 57 AMPNSRRDGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNLG-IQGVVEKNADQFELI 115 Query: 124 --------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 HQ R+A ++ + S LSP E E++R ++ G + Q+AE Sbjct: 116 EAIKKVARHQRYISPF--FREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAE 173 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L R+IKTI K + +KLG+ +DA L + A Sbjct: 174 KLSRSIKTISWTKVSAKTKLGIKTDAELYQYA 205 >UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM Length = 223 Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 15/93 (16%) Query: 130 SLNGVRQATDR-LNNQWYINQS--------------RTLSPTEREILRFMSRGYSMTQIA 174 ++G+R+A D L+ Y++ LSP E E+LR G S+T+IA Sbjct: 111 GVDGIRRAVDTVLSGGIYLDPELAHCLQDAGRERSLSVLSPKELEVLRLYVSGPSITEIA 170 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 QL+R + TI + + M KLG+S+DA L A Sbjct: 171 AQLRRTVSTISRQRISAMRKLGISNDAELFAYA 203 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 52.8 bits (125), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125 GL+ + L P+ R LV+ D E + +L+ VL +A+ E + Sbjct: 62 GLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRG 121 Query: 126 ELFLSLNGVRQA-TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 EL++ R+ D L N +LS ERE+L ++RGY+ +IA QL + KT+ Sbjct: 122 ELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTV 181 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 ++ M KLG+ S A L++ A Sbjct: 182 ETYRTRGMEKLGLRSRAALVQFA 204 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-FLSL 131 GLS LT L + P+ R ++++ D A + +L G L+K E Q + +S Sbjct: 71 GLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGA-GGYLTKRCGPEELVQAVRVVSS 129 Query: 132 NGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G+ D L+ Q + L+P EREI + G S+ IAEQL+ + KT+ H Sbjct: 130 GGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVHVH 189 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 + N++SKL S L+ A Sbjct: 190 RANILSKLQCESTVELVHFA 209 >UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY57_COMTE Length = 201 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%) Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 L +Q + ++L+P E E+LR+ RG S+ +IAE+L R+IKT+ + K M KL S+ Sbjct: 127 LQHQMLQERFKSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMRKLEAKSN 186 Query: 201 AGLLEAADILLCMRHCETSNVLH 223 L M C S V H Sbjct: 187 QEL---------MAFCLNSGVFH 200 >UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=Serratia proteamaculans 568 RepID=A8GFU0_SERP5 Length = 199 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 L+PTER I++ + G +T IA +L+R+I+TI +HK M KLG++S+A +L A LL Sbjct: 42 LTPTERHIVQALLSGQDLTAIAWKLQRDIRTISSHKQRAMGKLGLTSNA-MLHALGALL 99 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P E+++L + G+S++ IA Q R++KT+ K ++M KLG+ S+ L A Sbjct: 114 LAPREQQVLNALLNGHSVSDIAHQQARSVKTVSFQKRHLMQKLGLHSEVELFALA 168 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 37/58 (63%) Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 S L+P ERE+L+ ++ G S QIA L ++KT+ H+ N+ KLGV S A L++ A Sbjct: 150 SSELTPRERELLQLLAEGLSAKQIAANLHVSVKTVETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC Length = 246 Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 5/67 (7%) Query: 142 NNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 + W Q+RT LSP E +++R +SRG ++ +IA +L R+ KTI K N M K GV + Sbjct: 175 GSDW---QARTNLLSPRELDVVRLLSRGMAVGEIAVKLSRSRKTISTQKANAMKKFGVKT 231 Query: 200 DAGLLEA 206 + L++A Sbjct: 232 NVDLVDA 238 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 20/150 (13%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G +A + PRT+ L+++ E ++ +L +L A+T EL L+LN Sbjct: 65 GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAAT-----AELQLALN 119 Query: 133 GVRQATDRLN---------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 VR+ L+ ++ L+P REI++ ++ G S +IA L Sbjct: 120 AVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLL 179 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KTI H+ ++M++LG+ AG++ A Sbjct: 180 NLSVKTIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_C1M8K4 LuxR transcriptional regulator n=2 Tax=Citrobacter RepID=C1M8K4_9ENTR Length = 178 Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%) Query: 83 KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN 142 KF +++AD + A+L L VL++ S+L F Q LS+ + N Sbjct: 52 KFYNNVVVIVADSSV-AKLCVELLYVEKTIVLTEKSSLRDFGQLAKLSVG-------KWN 103 Query: 143 NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202 + Y +Q R L+ E++IL + GY+ +I+E + N KTI+AHK V++KLG+++ + Sbjct: 104 PRLYRSQKR-LTEREQQILNLLVSGYTAKEISELVSLNYKTIQAHKMRVVAKLGLTNTSD 162 Query: 203 L 203 L Sbjct: 163 L 163 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/68 (39%), Positives = 44/68 (64%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 TL+ EREIL+ ++ G S+ +IA + ++KT+ AHKFN+M KL + + A L++ A Sbjct: 155 TLTKREREILKMLAEGKSVKEIAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKK 214 Query: 212 CMRHCETS 219 +R ET+ Sbjct: 215 IIRLPETT 222 >UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B1Z6J3_BURA4 Length = 225 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 7/174 (4%) Query: 43 SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLI 102 S ++ D++SRI V+ ++ + +REG++ L L +P+ +V+ + +I Sbjct: 39 SSDTLIDSISRIHCDVVLIDYAIRGNGKREGMALLGYLRRTYPQVGMVVLVTHE-NPVII 97 Query: 103 GSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT------LSPT 156 ++ ++ ++SK + + G + ++ + LSP Sbjct: 98 QAILDLGVESLVSKLDDVGHIVTAIHACYGGGSYLSPQIKRSLASSGGDGRRPPLRLSPR 157 Query: 157 EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 E E++R G ++ QIA +L R TI + K + M KLGV D L+ A L Sbjct: 158 EIEVIRLYLSGMTINQIAGRLNRGKPTISSQKISAMKKLGVKGDVELVRYATCL 211 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 26/66 (39%), Positives = 39/66 (59%) Query: 134 VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193 +RQ RL+ LSP E+EI R ++ GYS+ QI + L + KT+ HK++V++ Sbjct: 141 MRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDALNISPKTVETHKYSVLT 200 Query: 194 KLGVSS 199 KL SS Sbjct: 201 KLRASS 206 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 20/221 (9%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +AL++ + GI S+ + G ++H Q + + + A V+ + +R Sbjct: 4 IALVDDHRLFLEGIRSILDREIG--LEVHASVGQGVELLNLLKTTRADVVLT--DIRMPG 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GLS ++ FP TR + + D E + L + G L K + +EL + Sbjct: 60 MDGLSLTRQICRSFPNTRVIALTMLDHEQD-VKDLLDAGARGYLVK----NVEKEELVQA 114 Query: 131 LNGVRQATDRLNNQ-------WYINQSRT----LSPTEREILRFMSRGYSMTQIAEQLKR 179 ++ V + L+ + W + R L+ ER++L +++G + QIAE LK Sbjct: 115 IHTVARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKL 174 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 + TI H+ N+ K+G+ S+ GLL+AA L +T N Sbjct: 175 SRFTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215 >UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, partial and n=17 Tax=Salmonella enterica subsp. enterica RepID=Q9EUH1_SALEN Length = 119 Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 7/75 (9%) Query: 145 WY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 WY N LSP E ++R + RGY+ QIA R++KTI A K +LGV Sbjct: 18 WYDRLCIEFNSDGGLSPAELRVIRLLLRGYNSGQIAALCFRSVKTISAQKGQAFRRLGVR 77 Query: 199 SDAGLLEAADILLCM 213 +DA LL ILL M Sbjct: 78 NDATLLPTL-ILLGM 91 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 37/56 (66%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L+P+E E+L + G+S +IA+ L R+IKTI H+FN+ +KL + A L+ A Sbjct: 155 SLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKTIETHRFNIRTKLNLKDGADLIRYA 210 >UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM Length = 210 Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 5/101 (4%) Query: 102 IGSLSPSPLDGVLSKASTLEIFHQELF-LSLNGVRQATDRLNNQWYINQSRTLSPTEREI 160 IG L + + GV+SKA L + + + +SL R D N S LS ERE+ Sbjct: 102 IGPLIDAGVRGVVSKAEPLPLLSEAIVRVSLGLDRLPPDCRNPA----DSEDLSRNEREV 157 Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 L + G ++++IA+Q R+IKT+ K + KLG+ +DA Sbjct: 158 LHLLLAGLTVSEIAQQRHRSIKTVSTQKKAALRKLGLRNDA 198 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------LEIFHQ 125 GL+C+ E+ +P + LV++ + E + ++ + G L K S L++ Q Sbjct: 58 GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAM-GYLPKTSADNELFDALQVLSQ 116 Query: 126 -ELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +LS N + D R + + L+ ERE+ + GY++T+IAEQL ++ Sbjct: 117 GRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSV 176 Query: 182 KTIRAHKFNVMSKLGVS 198 KT+ HK ++ KL S Sbjct: 177 KTVDTHKKHIYEKLHCS 193 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%) Query: 137 ATDRLNNQWY--INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194 A+ L +W + S LS E E+L G ++++IA++L R+IKT+ HK VM+K Sbjct: 136 ASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTVSTHKVAVMNK 195 Query: 195 LGVSSDAGLL 204 LG+ D L+ Sbjct: 196 LGIRKDIDLI 205 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 14/149 (9%) Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +G+ E+ K P R L++ EA L SL VL +A E+ H + L + Sbjct: 62 DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHA-VKLVM 120 Query: 132 NGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 NG L + Y NQ+ LS E+E+L++++ GY+ +I+ +L Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +IKT+ +K VM K+G + L+ A Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRYA 209 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 8/78 (10%) Query: 139 DRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190 D+L N+ I+ T L+P E EI+R + G S +QIAE+L + +TI+ H+ N Sbjct: 133 DQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLFLSAETIKTHRKN 192 Query: 191 VMSKLGVSSDAGLLEAAD 208 + KLG++S A L+ A+ Sbjct: 193 IYFKLGINSVAALILFAN 210 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 37/56 (66%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 TL+P+E E+L + +G+S +IA+ L R+IKTI H+FN+ KL + A L+ A Sbjct: 155 TLTPSEFEVLHLIGQGHSSQEIAKLLCRSIKTIETHRFNIRVKLHLKDGADLIRYA 210 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 9/74 (12%) Query: 134 VRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + QA R Q Y++ +RT LS ERE+LR + GY+ +IA+QL + KT+ Sbjct: 128 IDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSPKTV 187 Query: 185 RAHKFNVMSKLGVS 198 ++ VM KLG S Sbjct: 188 ETYRHRVMQKLGFS 201 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 8/202 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NVALI+ ++ G L G+ + Y S ++ +++ + AM E Sbjct: 5 NVALIDDHIVVRSGFAQLL-SLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDI-AMPDE 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GLS L L K P R ++++ D A + +L + + E+ + Sbjct: 63 --SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAV 120 Query: 130 SLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G D + + Q L+P EREI + G S+ IAEQL + KT+ Sbjct: 121 HAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVH 180 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 H+ NV+ KL ++ L+ A Sbjct: 181 VHRANVLDKLHCATTVELVHFA 202 >UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 RepID=B8IYZ1_DESDA Length = 223 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 13/122 (10%) Query: 97 IEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS-----------LNGVRQATDRLNNQW 145 I+ ++G + S GVL +A + E+FLS L RQA D Sbjct: 96 IDLGIMGHVRKSEPPGVLLRAIE-NVRRGEIFLSFSDPGGRLAALLRERRQAVDESGGDG 154 Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 + S LSP E+EI R ++ G+S+ IA L + KT+ HK+N+++KL S L++ Sbjct: 155 CGDLS-ALSPREKEIFRLLADGHSVKAIAGDLHISPKTVETHKYNLLTKLQAGSVGDLVK 213 Query: 206 AA 207 A Sbjct: 214 IA 215 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 43/188 (22%) Query: 45 ESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVI-------ADDDI 97 E+ + R+ ++ S R GL C+ EL + + LV+ + + Sbjct: 39 EALLALVERVPAEVLVLDLSM---PRVSGLECIKELKSRGQEIKILVLTMHGREYVKEAM 95 Query: 98 EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGV---RQATDRLNNQWYINQSRTLS 154 A +G + LD ELF+++ V R+ N + ++Q LS Sbjct: 96 AAGALGYIEKQALD-------------SELFVAIRTVASGRRYMSPDNAEVLLDQ--LLS 140 Query: 155 PT---------------EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 PT ERE+L+ + RG+++TQIA L ++KTI HK +VM KL ++ Sbjct: 141 PTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVKTIDTHKTHVMEKLNLTH 200 Query: 200 DAGLLEAA 207 + L++ A Sbjct: 201 KSQLVDYA 208 >UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME Length = 215 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 33/48 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 LSP ERE+LR +++G S+ +IA + R+ KTI K M+KLG++ D Sbjct: 153 LSPREREVLRLLAQGLSLREIAARFNRSRKTISVQKCAAMAKLGLTHD 200 >UniRef50_C3QQ50 Transcriptional regulator n=2 Tax=Bacteroides RepID=C3QQ50_9BACE Length = 216 Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 15/140 (10%) Query: 83 KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN 142 +FPR R ++ +++ + I +S G++ K ++ E H L + +G R ++ Sbjct: 75 RFPRVRWILFSNE-LSEDFIRRMSIERNIGMILKENSGEEIHSALMCTAHGERFLCHQIT 133 Query: 143 NQWYINQSR-----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 N I + L+ TE +IL+ ++ G S+ +IA + +I TI HK N+ KLGV Sbjct: 134 NLLIIGSDKPEIHSVLTVTEIDILKLIAHGKSVKEIALERTSSIHTIITHKKNIFRKLGV 193 Query: 198 SS---------DAGLLEAAD 208 ++ AGL+E + Sbjct: 194 NNVYEATKYTLRAGLIEMVE 213 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/61 (40%), Positives = 37/61 (60%) Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 ++Q++ LS E E++R + G ++ +IAE+L R+ KTI K M KLGV D LL Sbjct: 152 VDQAQNLSSREIEVVRLYASGMTVNEIAEKLSRSKKTISTQKARAMQKLGVEKDIDLLRY 211 Query: 207 A 207 A Sbjct: 212 A 212 >UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=A9BU04_DELAS Length = 217 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 27/149 (18%) Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +GL + L FP + LV+ +I +L + + GVL K L ++ +L Sbjct: 68 DGLRYVDYLIRHFPDIKVLVLTTVS-NPMIISALYDAGVAGVLLKEDPL----TQIMAAL 122 Query: 132 NGVRQATDRLNNQWY-----------------INQSRTLSPTEREILRFMSRGYSMTQIA 174 VR LN ++Y ++ +LSP E E+LR + G S+T+IA Sbjct: 123 QCVR-----LNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIA 177 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 +L+R++KT+ K + M KL V S+ L Sbjct: 178 ARLRRSVKTVSLQKNSAMRKLNVDSNQDL 206 >UniRef50_C6P0R1 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0R1_9PROT Length = 222 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%) Query: 121 EIFHQELFLSLN-GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +I +L+LS R + NQ + LSPTE E+L + G ++IA +L R Sbjct: 126 KILQGDLYLSDQMHSRMLKKMMGNQKSDSPVANLSPTELEVLHLVGLGMGTSEIAAKLVR 185 Query: 180 NIKTIRAHKFNVMSKLGVSS 199 +IKTI +HK N+ KL + S Sbjct: 186 SIKTIESHKANIKKKLNLDS 205 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 4/69 (5%) Query: 143 NQWYINQSRTLSPT----EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 N W + ++TL E+E++R + GYS ++A++L ++KT+ HK N+M KLG+ Sbjct: 136 NLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKTVENHKTNIMQKLGLD 195 Query: 199 SDAGLLEAA 207 S L++ A Sbjct: 196 SKHQLIQYA 204 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 27/201 (13%) Query: 26 SLFRK-----FAGNPYKLHTYTSQESFQ--DAMSRISFAAVIFSFSAMRSERREGLSCLT 78 +LFRK PY ++ ++ D +S+ SF ++F AM G+ L Sbjct: 14 TLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFD-IVFLDIAMSD--INGIETLK 70 Query: 79 ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138 ++ I +P T+ L+++ E I SL G L+K++ E EL +++ + + Sbjct: 71 KIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPE----ELLKAVDKIIKGG 125 Query: 139 DRLNNQW------YINQSRTLSPTER------EILRFMSRGYSMTQIAEQLKRNIKTIRA 186 L + + YI++S + P E+ ++ +++G S+ +I+++L +IKT+ Sbjct: 126 KYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVST 185 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 ++ ++ KLG+ ++A ++ A Sbjct: 186 YRARILEKLGLENNAEIINYA 206 >UniRef50_Q04UI4 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04UI4_LEPBJ Length = 233 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 25/218 (11%) Query: 1 MEHSRIKKRN-----VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS 55 M HS+I ++ V++IE +++ ++ L + + H SQ++ +D I Sbjct: 1 MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQKAIEDIPENIP 60 Query: 56 FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS 115 ++ + + GL CL EL K P T+ ++ + E +++ ++ + G L Sbjct: 61 DIVIL----DIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQ-GGVSGYLL 115 Query: 116 KASTLEIFHQELFLSLNG------------VRQATDRLNNQWYINQSRTLSPTER--EIL 161 K + E+F EL + + G +R+ T + NQ Q+ TL T+R +IL Sbjct: 116 KDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQN-TLGLTKRQLQIL 174 Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 F++ G ++ IA++L + T+ H + K+ V S Sbjct: 175 NFVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHS 212 >UniRef50_A1VAY8 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfovibrio vulgaris RepID=A1VAY8_DESVV Length = 235 Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 13/104 (12%) Query: 111 DGVLSKASTLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRT-----LSPTE 157 DG+L K + E + F+S + + R W + RT L+P E Sbjct: 109 DGLLLKEADHEEVRFAVRSVLAGGFFVSPSVAGRLATRCRQGWALEDRRTGGWEALTPRE 168 Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 RE+L +++ G+ +IA+ L + KT+ H+ N M+KLG+ S A Sbjct: 169 REVLHYVAEGFRNREIADLLVVSEKTVEKHRANFMAKLGLHSAA 212 >UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK Length = 210 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 37/59 (62%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 L+P ERE++ + G S++ I+++L R+ KTI HK KLGVSSDA L +L+ Sbjct: 152 LTPREREVVNLILIGMSISDISKKLVRDRKTISGHKQTAYRKLGVSSDAELFSIKHLLM 210 >UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1 Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO Length = 222 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 39/57 (68%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 ++ L+ E E+L +++ G S+++IA + +R+IKTI K +VM KLG+ +D GL+ Sbjct: 150 KEANRLTKKEWEVLLWIAEGMSVSEIASKKQRSIKTISTQKRSVMKKLGIKNDFGLM 206 >UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0 Length = 217 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +TLSP E E+LR +G + IA+QL R+ KTI K M KLGV ++ L+ Sbjct: 154 KTLSPRELEVLRLFVQGKPIVDIAKQLNRSDKTISLQKNAAMRKLGVDNNQALIS----- 208 Query: 211 LCMRH 215 C+ H Sbjct: 209 YCLTH 213 >UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL Length = 215 Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%) Query: 38 LHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDD 96 +H + + DA+S++ V+ FS R +R +G L EL + P + +V+ Sbjct: 32 VHQCANGKDLLDALSKVETDLVVTDFSMTREDRSVDGFGLLAELRRRHPDVK-IVLLTAL 90 Query: 97 IEARL--------IGSLSPSPLDGV--LSKASTLEIFHQELFLSLNGVRQATDRLNNQWY 146 + A + +G+L S D + L++A + +LS Q+ + + Sbjct: 91 VNAGIFTRALSVGVGALV-SKTDSISELARACARVKISRSPYLS--PAVQSIIHGASMDH 147 Query: 147 INQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 N S+ L+P E E++R + G S+ QIA QL R+ TI K+N K+G +S L+ Sbjct: 148 PNTSKARLTPKELEVVRLLVAGRSLAQIASQLGRSPSTISTQKYNASRKIGATSYTQLIR 207 Query: 206 AA 207 A Sbjct: 208 YA 209 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%) Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ---- 125 R GL EL+ +PR R L++ D E L +L VL + ++ Sbjct: 90 RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRAA 149 Query: 126 ---ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAE 175 E FL + + + Y+ Q+R L+P E EIL+ ++ G+S +IA+ Sbjct: 150 VRGEPFLYPGAIS-----VLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSS 199 L ++KT+ H+ N+++KLG+ Sbjct: 205 TLFISVKTVERHRANILAKLGMKD 228 >UniRef50_A0NVX8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVX8_9RHOB Length = 217 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 2/136 (1%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+ L E A ++ + R+V+ LI L + +DG+ SKAS F+Q+L L Sbjct: 71 GVEVLIE-ARRWSKETRVVVLTGISAVGLISDLIETGVDGLFSKASDNAEFYQKLPGILR 129 Query: 133 GVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191 G R +D L L+ ER+ L + G S +IAE L +IKT+ H+ ++ Sbjct: 130 GQRHISDVFLKILEETPAPPVLTDRERQTLNLILAGRSNKEIAEGLGISIKTVDKHRTSL 189 Query: 192 MSKLGVSSDAGLLEAA 207 M KL V S L+ A Sbjct: 190 MQKLNVHSVPQLMAKA 205 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+ TEL P + ++++ D E ++ ++ VL KAS+ E+ ++ Sbjct: 63 GIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARG 122 Query: 133 GV---RQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G Q +DRL + T LSP E ++LR ++ G + IA L + Sbjct: 123 GSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGL 182 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+R+++ +M KLGV++ AGL + A Sbjct: 183 QTVRSYRKTMMKKLGVNNVAGLTQLA 208 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 33/48 (68%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 +L+ ERE+LR +++G S ++A QL + KT+ H+ NVM KLG SS Sbjct: 149 SLTQREREVLRLLAQGDSNREVAGQLSISAKTVETHRANVMRKLGASS 196 >UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria RepID=A6V5P3_PSEA7 Length = 221 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 21/174 (12%) Query: 60 IFSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDDIEARLI-GSLSPSPLDGVLSKA 117 I +S ER +GL + L FPRTR L+ + RLI SL + GV+ K+ Sbjct: 59 ITDYSMPGDERYGDGLKLIDYLLRNFPRTRVLIFTM--VSNRLILDSLYDHGVAGVVLKS 116 Query: 118 STLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169 L+ + ++ + + A + N+ LS E E+LR G + Sbjct: 117 GELDELLLALDVVLQNRIYRGAHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNN 176 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223 + IA LKR++KT+ K + M KL V+SD L M C +N+ H Sbjct: 177 VCDIARLLKRSVKTVSTQKISAMRKLEVNSDQAL---------MTFCVRANLFH 221 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 7/162 (4%) Query: 51 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110 ++ ++ VI FS + R +GL+ L+ L + +V+ + L L+ L Sbjct: 43 LAHVACDVVITDFSMPNTGRADGLAMLSTLRREHGALPVIVLTNMANAGLLRAMLNEGVL 102 Query: 111 DGVLSKASTLEIF-------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRF 163 V A E+F +++S R+ T + ++ L+P E E+LR Sbjct: 103 GIVEKGAEKSELFAAVRTALRGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRL 162 Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 ++ G S T++ + L R IKT+ K + KLG+ SDA L E Sbjct: 163 LASGKSPTEVGQMLHRTIKTVSWAKTSAKRKLGLKSDAELYE 204 >UniRef50_A3U840 DNA-binding response regulator, LuxR family protein n=1 Tax=Croceibacter atlanticus HTCC2559 RepID=A3U840_9FLAO Length = 210 Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 26/64 (40%), Positives = 39/64 (60%) Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +++ R LS E E+L F+S+G IAE LK N KT+ +K + KL V S AGL++ Sbjct: 144 VSKYRALSSREIEVLNFISKGLKNKDIAEMLKINEKTVSTYKTRLQKKLNVDSVAGLIKQ 203 Query: 207 ADIL 210 + +L Sbjct: 204 SKML 207 >UniRef50_Q391P2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia sp. 383 RepID=Q391P2_BURS3 Length = 216 Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 34/52 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 LSP E EILR + G + QIAE++ + T+ AH+ N+ KLG+ ++A L+ Sbjct: 152 LSPREIEILRMIGEGLTKQQIAERIGHSANTVEAHRTNIKRKLGLDNNAELI 203 >UniRef50_UPI0001744DFC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001744DFC Length = 224 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 34/52 (65%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 N TL+ E E+ +++SRGY +IAE+L IKTI H+ N+M++L + + Sbjct: 155 NPLSTLTDREMEVFQWLSRGYGTKRIAERLGLGIKTIETHRANIMARLDLHT 206 >UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQZ3_9BACT Length = 222 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LS ERE+L+ ++ G+S QIAE L+ ++KTI AH+ N+M KL S L A Sbjct: 147 LSNREREVLQAVAEGFSTKQIAEMLEVSVKTIEAHRANLMKKLDARSAVELTRCA 201 >UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZJS0_9SPHI Length = 223 Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 20/68 (29%), Positives = 44/68 (64%) Query: 140 RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 +++++ ++ ++P ERE+L + + Y+ +IA+QL +I+T+ H+ N+++K GV + Sbjct: 146 QISSKPKVDDDVHMTPREREVLALILKEYTTQEIADQLFVSIRTVETHRKNLLTKFGVKN 205 Query: 200 DAGLLEAA 207 GL+ A Sbjct: 206 VVGLVVKA 213 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 12/143 (8%) Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +GL L + K TR LV++ D E L+G + DG L K S ELF ++ Sbjct: 64 DGLETLRRVRAKGLTTRVLVLSMHD-ETHLVGQALSAGADGYLLKDS----MDDELFFAI 118 Query: 132 NGVRQ-------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 V + A DR Q + +L+ ERE+L+ ++ G + + +AE L + T Sbjct: 119 ESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTA 178 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 H+ N+M KL V + L+ A Sbjct: 179 TRHRANLMQKLNVHNQVELVRIA 201 >UniRef50_Q47I89 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q47I89_DECAR Length = 203 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 35/52 (67%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 L+P E+E++ + GY +IAE+L +++T+ HK +VMSKL V S A L+ Sbjct: 145 LTPREQEVMNLVVGGYHNREIAEKLGISVRTVEVHKAHVMSKLDVDSVADLV 196 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 3/68 (4%) Query: 143 NQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 N ++ SRT LSP E E+L +++GY+ ++A+ L ++KT+ H+ ++M ++G+ S Sbjct: 137 NAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETHRQHIMRRIGLHS 196 Query: 200 DAGLLEAA 207 A L+ A Sbjct: 197 RAALVRYA 204 >UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH0_PSEF5 Length = 251 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 32/54 (59%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 TLSP E E+LR G ++QIA + R+IKTI K KLG+ +DA L + Sbjct: 163 TLSPKENEVLRCFLDGLRISQIASKFSRSIKTISGQKQAAFRKLGIRTDAELFK 216 >UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter sp. M21 RepID=C6E2Z2_GEOSM Length = 215 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%) Query: 140 RLNNQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 R + W Q + L+P E +I+ +++G S ++EQL ++KT+ AH+ ++M KLG+ Sbjct: 137 RKGSTWSAAQPQQVILTPREHDIMVLLAQGKSSRAVSEQLLISVKTVEAHRAHIMKKLGL 196 Query: 198 SSDAGLLEAA 207 S A L + A Sbjct: 197 SGMAALAKYA 206 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%) Query: 134 VRQATDRLN-NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192 V+ A D L N N LS E E++R G ++ +I+EQL R+IKTI K M Sbjct: 135 VKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAM 194 Query: 193 SKLGVSSDAGLLEAA 207 KLG+ D+ L + A Sbjct: 195 RKLGLERDSELFQYA 209 >UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JNS6_9BACT Length = 220 Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 8/126 (6%) Query: 85 PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNG---VR-QATDR 140 P + L+I+ + + + IGSL + G L+K +F Q + NG V+ A + Sbjct: 84 PEAKILIISSVE-DPKRIGSLLQMGVTGFLNKKEEFSVFEQAIEAVANGNIFVKASAQTQ 142 Query: 141 LNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 ++ ++Q TLS E++I+ F++ G + +IA+ L +IKT+ +H+ N+ KL + Sbjct: 143 SDSPDVLDQKELLETLSDREKQIVVFVASGMTNKEIAQNLGLSIKTVESHRSNISKKLKI 202 Query: 198 SSDAGL 203 AG+ Sbjct: 203 FDIAGV 208 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Query: 136 QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195 Q +LN YI ++ LSP E EI+ + YS +I+E+L ++ T+ H+ N+M KL Sbjct: 141 QNNPKLNKNVYI-ENPILSPREIEIVTLICLEYSGKEISEKLFISVNTVETHRKNIMKKL 199 Query: 196 GVSSDAGLLEAA 207 + + GL++ A Sbjct: 200 NIKNTIGLVKYA 211 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 39/57 (68%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + L+ +R+IL+ ++ GYS +IAE++ +IKT+ H+ ++MS+L + AGL+ A Sbjct: 152 KLLTSRQRQILQLIAEGYSTREIAERMSVSIKTVETHRAHIMSRLNIFDIAGLVRFA 208 >UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VGJ9_PSEU5 Length = 218 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%) Query: 135 RQATDRLNNQW----YINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 R T+RL QW + +S+T L+ EREIL +G S +IAEQL + TI++H Sbjct: 129 RVLTERLLGQWRRMRQLAESKTSLTLREREILSLAGKGLSNAEIAEQLCLSPHTIKSHIH 188 Query: 190 NVMSKLGVSSDAGLLEAADIL 210 N++ K+G S+ A EAA +L Sbjct: 189 NLLRKIGASNRA---EAAYLL 206 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 12/169 (7%) Query: 49 DAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPS 108 D ++R+ ++ S E GL ++ FP TR +++ + L +L Sbjct: 41 DLVARVEPHVLLLDISMPPGEN--GLIACERISCDFPSTRIIILTMFEETDYLFYTLRGG 98 Query: 109 PLDGVLSKAST-------LEIFHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTER 158 VL +ST ++ E ++ N + + +L+ Q + N LS E Sbjct: 99 AAGYVLKNSSTEVLLGAIRKVATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREF 158 Query: 159 EILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 EI +++GY+ + A++L ++KT+ H+ + +KLGV+S A L+ A Sbjct: 159 EIFSLLAQGYTNKEAADKLFISVKTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1AZV4_RUBXD Length = 222 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 32/47 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+P ERE+L+ ++ G S +IAE+L ++ T R H N++SKLG S Sbjct: 156 LTPREREVLQALAEGLSNREIAERLHMSVDTERTHMVNILSKLGAHS 202 >UniRef50_C6WIE2 Transcriptional regulator, LuxR family n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WIE2_ACTMD Length = 956 Score = 47.0 bits (110), Expect = 5e-04, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 35/54 (64%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 +LS ERE+ R +S G + +IAE+L + KT+ AH V +KLGV S G+++ Sbjct: 897 SLSGREREVARLVSEGLTNREIAERLSLSAKTVEAHLARVFTKLGVRSRVGVVQ 950 >UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammaproteobacteria RepID=Q5E1C3_VIBF1 Length = 205 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 8/104 (7%) Query: 107 PSPLDGVLSKASTLEIFH-----QELFLSL-NGVRQATDRLNNQWYINQSRTLSPTEREI 160 P +D + KA + F +ELF+++ NG+ + R +Q +L+ E+E+ Sbjct: 95 PMAVDAL--KAGAADFFQKPVDGEELFIAIKNGLAASEKRYKSQDAHRSYLSLTAREQEV 152 Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 L+ + +G Q+A+ + +++TI H+ N+M KLGV+S L+ Sbjct: 153 LKLIVQGMKNQQMADAMCVSLRTIEVHRSNLMKKLGVNSVVDLI 196 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 17/191 (8%) Query: 28 FRKFAGNPYKLHTYTSQE---SFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKF 84 R+ GN + E S DAMS++ + FS + +G++ L L +F Sbjct: 18 VREALGNEPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGGKYGDGVALLGFLRRRF 77 Query: 85 PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--------HQELFLSLNGVRQ 136 LV+ +++ S+ + + +++KA + E +LS + RQ Sbjct: 78 AGIP-LVVLTGVGGTQVLASIRKAGVACIVAKADPISELASAIRAARKGEGYLSADVERQ 136 Query: 137 ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196 R L+ E E+LR ++ G S T+IA QL+R+ +TI K + M KLG Sbjct: 137 LASRPEGGEA-----HLTKREAEVLRLIAEGLSQTEIAAQLQRSRQTISTQKHSAMRKLG 191 Query: 197 VSSDAGLLEAA 207 + A + E A Sbjct: 192 MQRPAEIFEYA 202 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 38/60 (63%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + + +L+ ERE+L + G S +IA+ L ++KTI H+ +M+KLGV + AGL+ A Sbjct: 151 DPADSLTKREREVLTLVGEGKSSPEIAKILGLSVKTIEGHRGRIMAKLGVHNVAGLVRQA 210 >UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA Length = 265 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 31/48 (64%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 LSP E E+LR +G+ + QIAE+L R+ KTI K + KLG+S D Sbjct: 195 LSPRELEVLRLTLQGFEVGQIAEKLSRSNKTISTQKRSAYRKLGISGD 242 >UniRef50_B7GTT1 Two component transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium longum subsp. infantis ATCC 15697 RepID=B7GTT1_BIFLI Length = 200 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 37/58 (63%) Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +++ LSP E EI+ +RG SM+ IAE+L T+R H + SKLGV+++ L+ A Sbjct: 137 KNKDLSPREMEIVDRWARGRSMSDIAEELSIGQTTVRTHLEHAASKLGVANNRALISA 194 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+ E E+L+ ++ G + +IAE+L + KT+ HK N++SKLGV+S L+ A Sbjct: 148 LTNRELEVLKLLAEGLTNLEIAEKLHLSNKTVSGHKINILSKLGVTSVVDLVNIA 202 >UniRef50_C8WK28 Transcriptional regulator, LuxR family n=1 Tax=Eggerthella lenta DSM 2243 RepID=C8WK28_EGGLE Length = 499 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 R LSP ERE+L ++ RGY+ +AE+L + T+R H ++ +KL ++S LL D Sbjct: 436 RGLSPREREVLYYLGRGYNHGYVAEKLYISENTVRTHVRHIYAKLAINSREELLAMID 493 >UniRef50_C7LUF3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LUF3_DESBD Length = 203 Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%) Query: 112 GVLSKASTLEIFHQELFLSLNG-VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170 G LSK S E + + L+G + L+++ + TLS ER++ R +++G +M Sbjct: 99 GYLSKNSAPEELEEAMISILDGGIYVNPSLLDSRRSTSAMDTLSRQERDVARRLAKGETM 158 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 T IA+ + ++KT ++ M KLG+++ +GL+ Sbjct: 159 TAIAQAMGVSVKTASTYRTRAMRKLGIATTSGLI 192 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%) Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 R G+ EL K P + ++++ D E + +L VL +A E + Sbjct: 62 RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121 Query: 124 HQELFLSLNGVRQATDRLNNQW-YINQSRTLSP--TERE--ILRFMSRGYSMTQIAEQLK 178 E +L R+ + L + + SR P TERE +LR + G + +IA +L Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT++AH+ N+M KLG+ L++ A Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYA 210 >UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC Length = 223 Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/52 (48%), Positives = 31/52 (59%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 +LS E EI R + RG S+T+IA R+IKTI K M KLG S+A L Sbjct: 163 SLSERELEIFRMLGRGMSVTEIAMHTNRSIKTISHQKMRAMHKLGARSEADL 214 >UniRef50_C4LED9 Transcriptional regulator, LuxR family n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LED9_TOLAT Length = 301 Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%) Query: 147 INQSRTLSPTERE--ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 IN +R +S T RE + R M GYS IA++L +++T++AHK ++ SKLG++S + L Sbjct: 197 INNTRGISLTLREMDVSRLMLGGYSSKGIAQKLAISVETVKAHKKHIYSKLGINSQSQLF 256 >UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP13_9BACT Length = 211 Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 8/94 (8%) Query: 110 LDGVLSKASTLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREIL 161 ++G+++K S++E I ++ S + + N+ Y + + L+P E ++L Sbjct: 97 VNGLVTKNSSIESLKDAIGQILKGAVYYSPEAYKLLRQPITNKDYNDSLKMLTPRETDVL 156 Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195 + + GYS +IA +++TI AH+ N+M KL Sbjct: 157 QMVGEGYSSKEIARSFNLSVRTIDAHRSNIMRKL 190 >UniRef50_C5S952 Two component transcriptional regulator, LuxR family n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S952_CHRVI Length = 208 Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 36/54 (66%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 +L+P ERE++ + +G + IA L +I+TI +H+ N+M KLGV S GL++ Sbjct: 142 SLTPREREVMEALVQGKANKVIAADLGASIRTIESHRANLMHKLGVRSLPGLVQ 195 >UniRef50_Q7UXT1 Response regulator n=1 Tax=Rhodopirellula baltica RepID=Q7UXT1_RHOBA Length = 211 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%) Query: 145 WYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 W +QS +LSP EREIL + G QIA QL ++KT+ AH+ N++ K+ V S Sbjct: 129 WLADQSVLKRIDSLSPREREILALVMDGRLSKQIASQLDISVKTVEAHRANILRKMHVDS 188 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 46.2 bits (108), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 34/60 (56%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ LS E E++R + G S+ IAEQL R+ KTI K + M KLG+ D L+ A Sbjct: 149 GKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTISTQKSSAMQKLGIERDVDLVRYA 208 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 16/130 (12%) Query: 85 PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN- 143 P+ R LV+ + E R+ +L+ DG K ++ H EL ++N V L Sbjct: 74 PQVRVLVLTVANCERRVAEALAAGA-DGYALK----KLGHGELMAAINAVCAGKTYLGPG 128 Query: 144 ------QWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193 + Y+ S +L+ ERE+L+ ++RG+ +IA++L IKT+ H+ +M Sbjct: 129 LSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVETHRTKIMQ 188 Query: 194 KLGVSSDAGL 203 KL + + A L Sbjct: 189 KLDLHNSAEL 198 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 112 GVLSKASTLEIFHQELFLSLNG----VRQATDRLN--NQWYINQS--RTLSPTEREILRF 163 G++ K+S+++ Q + G R +R+ W + + + LSP E E+LR Sbjct: 104 GLVDKSSSMDELPQAIQAVYRGQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRL 163 Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 + G ++ +I+ QL +++ TI K + M KLG+ DA L + Sbjct: 164 LGTGMTVKEISLQLHKSVSTISRQKGDAMLKLGLKGDAELFD 205 >UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersinia aldovae ATCC 35236 RepID=C4U6X8_YERAL Length = 144 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 39/53 (73%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 + LS E +++ +S+G+S+T++A+ L +++KT+ A K +VM+K+ V+++A Sbjct: 79 KVLSDAESKVISLISQGHSVTEVAKILNKSVKTVSAQKKSVMNKINVTNNADF 131 >UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14 Tax=Pseudomonas RepID=Q48GV3_PSE14 Length = 220 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 10/93 (10%) Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 I H + +L G R R + Y +R L EILR + RG S +IA+ L +I Sbjct: 130 IAHTVIERALRGTRSDRARAAKERYHLTARQL-----EILRLIVRGKSTREIADGLGLSI 184 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KTI H+ VM +L + AGL +L C+R Sbjct: 185 KTIETHRSQVMKRLQIFDVAGL-----VLFCVR 212 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 37/58 (63%) Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 SR L+ ERE++RF+S G S +IA +L ++KT+ +H+ M KLG+ + L+ A Sbjct: 150 SRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVDSHRTTAMRKLGLRNAVDLVRYA 207 >UniRef50_UPI00016AA17B two component transcriptional regulator, LuxR family protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016AA17B Length = 97 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 TLSP ER++L + RG + +IAE L +++T+ ++ +M KLGV GL+ A Sbjct: 31 TLSPRERQVLNRVVRGRTSARIAEWLHLSVETVETYRLRLMRKLGVGDITGLMRLA 86 >UniRef50_Q5P6A6 Two-component response regulator n=4 Tax=Rhodocyclaceae RepID=Q5P6A6_AZOSE Length = 218 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 11/179 (6%) Query: 41 YTSQESFQDAMSRISFAAVIFSFSAMRSERREGLS---CLTELAIKFPRTRRLVIADDDI 97 Y S ++F DA S+ +I +R + GL L P D I Sbjct: 37 YDSAQAFLDADISCSYGCLILD---VRMQALSGLQLQEALCARGFSLPIIFLSAYGDAQI 93 Query: 98 EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTE 157 A+ I + L L+ + L LS + + +++L Y + +LS E Sbjct: 94 GAQAIKKGAIDFLQKPYRNQDLLDAVNAALTLSKEAMGKQSEKLK---YRDCLESLSQRE 150 Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 +EIL + G S ++A L + KT+ AH+ +MSKLGV S L++ A +L HC Sbjct: 151 KEILDLVVGGNSSKEVARILGISHKTVEAHRGRLMSKLGVKSLGELIQLA--MLTSSHC 207 >UniRef50_UPI00018267FE transcriptional regulator, LuxR family protein n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI00018267FE Length = 210 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 8/136 (5%) Query: 72 EGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF- 128 E SCL EL R + ++I DDD A +GS + +S+ ++L QEL Sbjct: 58 ECFSCLPELH---ARQKGIIIGFVDDDRRACALGSCFEDII--FISRRASLARMRQELCR 112 Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188 L N R + + Q + LSP + I+ + +G ++ QIA +L+ + KT+ HK Sbjct: 113 LWHNLQRPEYHQQAVSCFDCQQKYLSPQQIRIMIGLHKGMTVLQIANKLRISGKTVFTHK 172 Query: 189 FNVMSKLGVSSDAGLL 204 + M K + SD L+ Sbjct: 173 YMAMQKFNLRSDYELV 188 >UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C3_PSEFS Length = 211 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LS ERE++R ++ G +++QIA ++ R+I TI K MS+L +S+D L A Sbjct: 150 LSGKEREVVRMLASGMTVSQIAARVNRSISTISKQKSTAMSRLCISTDVDLFAYA 204 >UniRef50_Q0S8Z3 Response regulator, two-component system n=6 Tax=Actinomycetales RepID=Q0S8Z3_RHOSR Length = 223 Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust. Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 17/75 (22%) Query: 146 YINQSRTLSPT--------EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 ++ SR + PT ERE+L ++RGY I+ +L + KT+R H NV++KLGV Sbjct: 145 FMAASRRVGPTVFPELTDREREVLDLVARGYDNASISRRLVLSPKTVRNHVSNVLAKLGV 204 Query: 198 ---------SSDAGL 203 + DAGL Sbjct: 205 PDRPAAIVRARDAGL 219 >UniRef50_A5FJ00 Two component transcriptional regulator, LuxR family n=3 Tax=Flavobacteriales RepID=A5FJ00_FLAJ1 Length = 209 Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 25/195 (12%) Query: 40 TYTSQESFQDAMSRISFAAVIFSFSAMRS-------------ERREGLSCLTELA---IK 83 T+ +S+ +IS A + +FS +R EGLS + E+ Sbjct: 13 THFGVKSYFKDHDQISIVANVGNFSMVRDILQTKEIDILILDLDLEGLSSIFEVKSILKN 72 Query: 84 FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNG--VRQATDRL 141 FP+T+ +VI D E + + + G + K LE + G + T R Sbjct: 73 FPKTK-IVIFSDLAEQMYAPNAIKAGVSGYVHKTEKLETLGLSIIKVHEGKIIINETVRK 131 Query: 142 NNQWYINQS------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195 N QS R LS E E+LR++S G +I++ L N KTI +K +++KL Sbjct: 132 NMALIAKQSKSERLYRKLSNREIEVLRYLSDGKKNNEISKILSLNEKTISTYKLRLLTKL 191 Query: 196 GVSSDAGLLEAADIL 210 V++ L+ A L Sbjct: 192 NVTNLVDLVNKAKTL 206 >UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella RepID=A9IRH9_BORPD Length = 258 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 L+ E E+LR +++G S+TQ+A +L R+ KTI HK M KLG++ D L Sbjct: 194 LTTAEIEVLRQIAQGLSVTQLAARLLRSKKTISTHKRRAMKKLGLADDLAL 244 >UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21 Tax=pseudomallei group RepID=C4I5I0_BURPS Length = 242 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 31/57 (54%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 R LS E EI+R G S+ +IA L R+ + + K N M KLG+ DAGL A Sbjct: 164 RQLSARELEIVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRYA 220 >UniRef50_A5EKH3 Two component transcriptional regulator, LuxR family n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5EKH3_BRASB Length = 205 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%) Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDD--------IEARLIGSLSPSPLDGVLSKASTL 120 +R +GL + E+ + P TR LV++ D + A +G ++ ++ L A Sbjct: 47 DRDDGLDLIKEIKTRHPGTRSLVLSFYDEAAYAERALAAGALGYVTKQQMETTLLTA-IR 105 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQL 177 + E+++S R+ +R + + + R LS E ++ + + G + QIA L Sbjct: 106 RVLSGEIYMSEALQRRLAERYVSGHTLEATSTMRALSDRELQVFQLVGEGRTTRQIAAML 165 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 R+IKTI +H ++ +KLG+ S A L + A Sbjct: 166 GRSIKTIESHVEHIKNKLGIESAAELAQRA 195 >UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex RepID=A2WHU0_9BURK Length = 204 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 32/56 (57%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L+ E E+LR G S+ +IA Q++R +TI A K M KLGV D L AA Sbjct: 124 SLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFRAA 179 >UniRef50_UPI0001C32085 transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C32085 Length = 429 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 23/152 (15%) Query: 48 QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSP 107 QD + RI + + + S R +G LT+ A+ RT V A L GS+S Sbjct: 288 QDGVGRIRVSWRVTPAELLLSARDDGPGALTDAALAVHRTGERVAA-------LGGSVS- 339 Query: 108 SPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167 +D V +T+ + L L V N L+ E E+L ++RG Sbjct: 340 --VDAVAGWGTTVTVA-----LPLAPVESGPP--------NPLAVLNARELEVLAELARG 384 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 QIAE L T++ H N++ KLGVSS Sbjct: 385 GRNRQIAEALAITPHTVKFHVANILRKLGVSS 416 >UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3 Length = 212 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 5/124 (4%) Query: 86 RTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH--QELFLSLNG-VRQATDRLN 142 R + L+I+D D E L+ ++ V S E+ H Q+++ + V T L Sbjct: 77 RVKFLIISDCDCELPLVMAVRAGVTGFVRKNVSKEELLHAVQQVYTNKEYYVSDVTQVLL 136 Query: 143 NQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 + NQ+ S E E+LR++ +G S QIA+ L + KTI H+ N+M K GV Sbjct: 137 KGFLANQTSDSIFSDRELEVLRYICKGRSNEQIADILFISEKTIATHRRNIMKKAGVKKS 196 Query: 201 AGLL 204 L+ Sbjct: 197 TELI 200 >UniRef50_B9XRD7 Two component transcriptional regulator, LuxR family (Fragment) n=1 Tax=bacterium Ellin514 RepID=B9XRD7_9BACT Length = 222 Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 31/52 (59%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 + LS ERE+L +S+G +IA+ L NI+T+R H N+ KL VSS Sbjct: 165 GKEHPLSVREREVLELLSKGLPYKEIADMLGVNIETVRKHCHNIYEKLQVSS 216 >UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS Length = 231 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LSP E E++R + G + +IA +L R+ KTI K M KLG+ D L++ A Sbjct: 164 VLSPKESEVVRLYAAGLRIDEIAAKLNRSKKTISTQKVKAMHKLGIERDIDLMKYA 219 >UniRef50_B2JQA9 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B2JQA9_BURP8 Length = 209 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/56 (42%), Positives = 37/56 (66%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LSP E E+L++++RG S +IA +L + KT+ +K + KLG+SS A L+E A Sbjct: 147 VLSPREMEVLQYLARGVSNKEIASRLFLSDKTVSTYKTRLCEKLGLSSLAALIEFA 202 >UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum RepID=Q89DY0_BRAJA Length = 225 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/60 (36%), Positives = 37/60 (61%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ R L+P E+ +++ ++ GYS I+ L ++KT AH+ M KL V+S AGL+ A Sbjct: 158 DRGRGLTPREQLVVKLVAEGYSNKGISAILNLSVKTTEAHRAAAMRKLDVNSTAGLVRYA 217 >UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5 Tax=Burkholderiaceae RepID=B4ELF5_BURCJ Length = 238 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 31/52 (59%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 LSP E E+LR G S++ IA + R+ KTI A K + KLG+ SDA L Sbjct: 175 LSPREHEVLRCFLAGMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAELF 226 >UniRef50_D1ADV5 Transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ADV5_THECD Length = 956 Score = 44.7 bits (104), Expect = 0.002, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 33/54 (61%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 LSP E E+ R + G + QIAE+L +I+T+ H N+ +KLGV S ++ A Sbjct: 893 LSPRELEVARLVMEGCTNQQIAERLFLSIRTVETHLSNIFAKLGVGSRVAMVSA 946 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 34/55 (61%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P ER+IL + RG + IA QL +++T+ H+ N+ KLG+ A L++ A Sbjct: 261 LTPRERDILHGIGRGQANKDIAVQLGVSVRTVETHRLNLKRKLGIEGRAELVKYA 315 >UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobacteriaceae RepID=YJJQ_ECO57 Length = 241 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 36/53 (67%) Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 +S L+ +ER++LR + +G+ + QIA LK++ KTI A K + M +L + S+A Sbjct: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202 >UniRef50_Q7NVE2 Capsula synthesis response regulator transcription regulator protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVE2_CHRVO Length = 231 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 32/48 (66%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 LSP ERE+LR G S+++IA + R+IKTI K + + KLG+ SD Sbjct: 171 LSPREREVLRCCLLGLSVSEIAVKFSRSIKTISNQKQSALKKLGLRSD 218 >UniRef50_C7C553 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis RepID=C7C553_9ENTR Length = 215 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 11/130 (8%) Query: 82 IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVL--SKASTLEIFHQELFLSLNGVRQATD 139 +++ + R L++ + +A L+ +P L +L +K S + E+ + N T Sbjct: 66 LQYRKKRSLIVGFYEGDAPLLQPRAPLCLKNMLYLNKRSPMNKIRNEILFAWN--ENVTG 123 Query: 140 RLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194 N +W + +T LS +++I F +G++ QIA + N KT+ AHK +M K Sbjct: 124 --NCEWVVPNCKTCSHVMLSKQQQKIALFTIKGFNNRQIAGLMNINAKTVSAHKHCIMEK 181 Query: 195 LGVSSDAGLL 204 + ++A L+ Sbjct: 182 FNIDNNADLV 191 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 35/56 (62%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+ ER+IL + RG + +IA QL +++T+ H+ N+ KLG+ AGL++ A Sbjct: 166 ALTRRERDILGCIGRGMANKEIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYA 221 >UniRef50_D1R7I4 Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R7I4_9CHLA Length = 265 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/56 (37%), Positives = 36/56 (64%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L+P E++IL+F+S GY + IAEQL+ + +T+ + + KL SS L++ A Sbjct: 199 SLTPREKDILKFVSNGYPASYIAEQLQLSQRTVENYIATIKCKLSCSSKVELIQEA 254 >UniRef50_Q9XAT8 ThcG n=1 Tax=Rhodococcus erythropolis RepID=Q9XAT8_RHOER Length = 927 Score = 44.7 bits (104), Expect = 0.003, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 L+P E E+ R + G S QIA +L + +T+ +H ++V KLG++S A L +A D L Sbjct: 861 LTPQELEVARLAATGLSNPQIASRLFLSPRTVSSHLYHVFPKLGITSRAELRDALDAL 918 >UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1 Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR Length = 194 Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 31/47 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+ E++I+ ++RG S QIAEQL + KT+ HK N++ K GV S Sbjct: 136 LTEKEQQIVALLARGLSNLQIAEQLHISNKTVSTHKKNILEKTGVQS 182 >UniRef50_A8GBA0 Two component transcriptional regulator, LuxR family n=4 Tax=Enterobacteriaceae RepID=A8GBA0_SERP5 Length = 213 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%) Query: 56 FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGV 113 FA VI + +GL L ++ +P+ L+ +++I AR+ + + +G Sbjct: 60 FALVILDIGL---PQVDGLQLLKKIRRHYPQQSILIYTAQEEEIYARMAYA---AGANGF 113 Query: 114 LSKASTLEIFHQELFLSLNGVRQA-----TDRLNNQWYINQSRTLSPTEREILRFMSRGY 168 + K S LE +L L++ V + + + L+P E +IL +S+G Sbjct: 114 VHKGSRLE----QLVLAIETVLAGELSFPAAAMAEETQPTEGSLLTPKELQILGLLSKGL 169 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 S QIAE L + KT+ HK N++ K G S+ Sbjct: 170 SNLQIAEMLSISNKTVSTHKKNILRKTGASN 200 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG-LLEAA 207 L+P + EIL + G +IA +L ++KT+ AH+ +M +LGV A LLEAA Sbjct: 152 VLTPRQTEILELIGSGLGTKEIARRLDLSVKTVEAHRAQIMERLGVRDIANLLLEAA 208 >UniRef50_B4SIR4 Two component transcriptional regulator, LuxR family n=2 Tax=Stenotrophomonas maltophilia RepID=B4SIR4_STRM5 Length = 208 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%) Query: 110 LDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS-RTLSPTEREILRFMSRGY 168 + GV+ KA L + + + V Q RL + + LS ERE+L + G Sbjct: 108 IGGVVGKAEPLPMLSEAIVC----VHQGLGRLPPDFILPADCSELSRNEREVLELLLTGL 163 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 ++++IA + R++KT+ K + KLG+ +DA Sbjct: 164 TVSEIALRRHRSVKTVSTQKIAALRKLGLRNDA 196 >UniRef50_Q7MV58 Transcriptional regulator, LuxR family n=2 Tax=Porphyromonas gingivalis RepID=Q7MV58_PORGI Length = 199 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 22/195 (11%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 VA++E M G+E+L +K G YK+ F DA + + VI + Sbjct: 8 VAIVEPLPMIRAGLEALLKKITG--YKIQ-------FIDAPADNGWVDVISFYCPDVVFM 58 Query: 71 REGLSCLT--ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +S LT E P++R + + I++ ++ + D LS +T+E EL Sbjct: 59 NPLVSGLTRNESDKACPQSRYVGLLTTPIDSNMLHNY-----DDTLSVHATVE----ELK 109 Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188 L + Q T L + + +TL+ E+EI+ + +G + +IAE+L + T+ H+ Sbjct: 110 QLLERLYQKT--LEPEESGEEQQTLTNREKEIVVGVVKGMTNKEIAEELFLSTHTVITHR 167 Query: 189 FNVMSKLGVSSDAGL 203 N+ KL + S +GL Sbjct: 168 RNIAKKLQIHSPSGL 182 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%) Query: 73 GLSCLTELAIKFPRTRRLVIA-DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 G++ L +FP R L ++ +D+E + + G +SKA+ QEL ++ Sbjct: 62 GIALCQRLRERFPELRLLALSMHEDLE--YVRGFLQAGGQGYVSKAAV----DQELLDAV 115 Query: 132 NGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 V + LN + + LSP E E+LR +++G S ++AE+L + Sbjct: 116 LAVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISE 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ ++ M KLG++S + LL A Sbjct: 176 KTVATYRERGMEKLGLASRSELLRYA 201 >UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V170_PSEA7 Length = 213 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 34/51 (66%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 L+P E E+LR G ++ +IA +L R+ +TI A K + M KLG+ ++AGL Sbjct: 153 LTPREVEVLRLYGSGLAIGEIALRLCRSKQTISAQKSSAMRKLGLDTNAGL 203 >UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Enterobacter sp. 638 RepID=A4WED0_ENT38 Length = 204 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 32/49 (65%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 +P E +L ++ +G S ++I++ L R+ KTI +HK N+M KLGV D Sbjct: 142 VFTPAESTVLEYLRKGCSGSEISKLLFRSEKTISSHKRNIMGKLGVRDD 190 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 17/196 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G+ L + FAG + + Q A+ S + Sbjct: 14 VIIVDDHTLVRAGLSRLLQTFAG----IDVVGEASNAQQALDMTSLHRPDLVLMDLSLPG 69 Query: 71 REGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--- 125 R GL +T++ PRT ++++ DD + R +L + V+ A+ LE+ Sbjct: 70 RSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVR--DALDRGAVGFVVKDAAPLELELALRA 127 Query: 126 ----ELFLSLN-GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 ++FLS + L + + + LSP +REILR + RG S +IA L + Sbjct: 128 AAAGQVFLSPQISSKMIAPMLGREKPVGIA-ALSPRQREILREIGRGQSNKEIAADLGIS 186 Query: 181 IKTIRAHKFNVMSKLG 196 +KT+ H+ +M LG Sbjct: 187 VKTVETHRARMMESLG 202 >UniRef50_C7ML75 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=1 Tax=Cryptobacterium curtum DSM 15641 RepID=C7ML75_CRYCD Length = 472 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 35/59 (59%) Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 S L+ E EIL F+ RGYS++ IAE+L + T+R H ++ +KLG+ S L D Sbjct: 406 SDKLTNRENEILVFLGRGYSISYIAEKLFISESTVRTHVKHIYAKLGIHSREDLFALID 464 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 31/45 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 L+P ER+ILR +++GY+ +I EQL ++ T++ H + +KL V Sbjct: 159 LTPRERDILRLLAQGYTNQEIGEQLALSVGTVKNHLSVIFAKLAV 203 >UniRef50_A0QW50 Two-component system response regulator n=1 Tax=Mycobacterium smegmatis str. MC2 155 RepID=A0QW50_MYCS2 Length = 163 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 TL+P ERE+L M+ G+S T IA +L + + H N+ KLG+S Sbjct: 98 TLTPREREVLGLMAEGHSNTGIAARLAVTVPAVERHVTNIFVKLGLS 144 >UniRef50_Q31FU6 Two component transcriptional regulator, LuxR family n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FU6_THICR Length = 232 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/164 (23%), Positives = 82/164 (50%), Gaps = 11/164 (6%) Query: 50 AMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSP 109 +M ++S AVI +++ + + A + P + V+ D +E + S+S + Sbjct: 60 SMPKLSGLAVITQLK----KQKNPIKIIVLTAAEAPNVWKEVL-DLGVEGLALKSVSKAE 114 Query: 110 L-DGVLSKASTLEIFHQELFLSLNGV-----RQATDRLNNQWYINQSRTLSPTEREILRF 163 L G+ S + H E+ +L+ Q T ++ ++ + LS E+++++ Sbjct: 115 LVSGIKSVIADENFIHSEIQPALDAYLAELEGQKTPEEDSGDKPSRPKKLSVREKQVIKL 174 Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ GY IA+ L+ + +T+ H+ N+M+KLG+++ A L+ A Sbjct: 175 VAEGYKTKDIADMLEISDRTVSKHRENIMTKLGMTASAELVNYA 218 >UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=Serratia RepID=A8GKY2_SERP5 Length = 203 Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust. Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%) Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQL 177 LE F Q+ +++L+ + W Q R LS E+++L+ MS G S IA L Sbjct: 115 LEQFCQQPWVALHA--------SGIWKCRQCRIAALSSCEKKVLKLMSTGMSACTIAGML 166 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGL 203 R+ KTI AHK + M KL V L Sbjct: 167 HRSQKTISAHKRSAMRKLNVHKSTEL 192 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%) Query: 83 KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGV---RQATD 139 KFP + L+++ D + ++ L+ L S E+F+ + G+ R +D Sbjct: 71 KFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGGIYYSRAISD 130 Query: 140 RL-NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 L + +++ L+ E+ +LR ++ G + ++A +L +++TI H+ N+ KL + Sbjct: 131 LLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHRRNIKDKLAIK 190 Query: 199 SDAGLLEAA 207 + AGL+ A Sbjct: 191 TSAGLVRYA 199 >UniRef50_C5NV86 Oxygen regulatory protein NreC n=1 Tax=Gemella haemolysans ATCC 10379 RepID=C5NV86_9BACL Length = 206 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 13/103 (12%) Query: 112 GVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI---------NQSRTLSPTEREILR 162 G ++K++ H+E+ L+++ V D N+ Y ++ LS E+E+ R Sbjct: 100 GYVTKSTA----HEEILLAIDKVMFKNDIYLNEKYATIFYELFKEDKEIELSEREKEVGR 155 Query: 163 FMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 ++ GY++T I E+L ++KT+ +K +M K + L+E Sbjct: 156 YIVEGYTLTDIGEKLFLSVKTVDTYKKRLMEKTNTKKRSELVE 198 >UniRef50_Q10550 Putative HTH-type transcriptional regulator Rv0890c/MT0914 n=67 Tax=Mycobacterium RepID=Y890_MYCTU Length = 882 Score = 43.9 bits (102), Expect = 0.004, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 38/56 (67%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L+PTER+++R +S G S IA++L + +T++ H +V +KLG+ S L++ A Sbjct: 820 SLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEA 875 >UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Burkholderia ubonensis Bu RepID=UPI00016A3B5F Length = 169 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 N++ L+ E +LR ++RG S QI E L + KT+ +K N+ KLGVSS GL + A Sbjct: 104 NRTGGLTDRELTVLRGLARGSSNRQIGEDLCISNKTVSTYKSNIFEKLGVSSVVGLADYA 163 >UniRef50_D2QUB6 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QUB6_9SPHI Length = 213 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 39/59 (66%) Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 Q T+S E ++L+ +++ +S TQIAE+L + T+ H+ ++M KLGV + GL++ A Sbjct: 149 QKITISKRELDVLKLIAQEFSGTQIAEKLFISPTTVETHRKHLMQKLGVQTTIGLVKYA 207 >UniRef50_D2SB03 Two component transcriptional regulator, LuxR family n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SB03_9ACTO Length = 248 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+ EREIL ++RG S IA+QL ++ T+R H N+ +KLG S Sbjct: 184 VLTEREREILDLLARGLSNADIAQQLTISVHTVRNHVANLSAKLGAHS 231 >UniRef50_Q2W0G1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Magnetospirillum magneticum AMB-1 RepID=Q2W0G1_MAGSA Length = 225 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 34/51 (66%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 LS ER++L+ ++ GY+ ++A L ++KT+ H+ N+M+KLGV + L Sbjct: 164 LSGRERQVLKLLAEGYTNQKVAGILGISVKTVDRHRENIMNKLGVRTPVAL 214 >UniRef50_B5I095 Two component transcriptional regulator n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5I095_9ACTO Length = 239 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 12/133 (9%) Query: 77 LTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----LEIFHQELFLSLN 132 + +LA RTR LV++ D EA ++ +L + + G L K ++ L H Sbjct: 92 IEDLATMAARTRVLVLSGADEEAVIVPALR-AGVRGYLRKGASQQEILRCLHVIAAGGAA 150 Query: 133 GVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 +RL++ + Q T L+ ER++L F++RGY+ +IA L + KT+R Sbjct: 151 FGVGTAERLSSFFDGAQPETSNAAFPFLTERERQVLDFLARGYTNRRIARTLVLSEKTVR 210 Query: 186 AHKFNVMSKLGVS 198 H ++++KL V+ Sbjct: 211 NHVSHLLAKLQVN 223 >UniRef50_B0MWF4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWF4_9BACT Length = 203 Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 LS E E+L +++G QIA++L+ + T+ +H+ N+M KLGV S A L+ A + Sbjct: 133 LSVRETEVLTLIAQGLLNKQIADRLQIGLTTVISHRRNIMQKLGVQSVAALVICA---VS 189 Query: 213 MRHCETSNVLHPY 225 M + + S++ P+ Sbjct: 190 MGYVDESDIRTPH 202 >UniRef50_C7M954 Transcriptional regulator, LuxR family n=2 Tax=Capnocytophaga RepID=C7M954_CAPOD Length = 234 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 L+P E+EIL S+G+S +IAEQL + T+ H+ N+ K V S L+EA D+ Sbjct: 173 VLTPREKEILTLASQGFSSKEIAEQLFISTYTVNRHRQNIREKFNVES---LIEAIDL 227 >UniRef50_B5HBI1 Two-component system response regulator n=23 Tax=Streptomyces RepID=B5HBI1_STRPR Length = 289 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 +L+P E+E+LR M G +AE+L + T+R H NV+ KLGV S Sbjct: 206 SLTPREQEVLRCMVAGLGRKAVAERLFLSPHTVRTHMQNVLGKLGVHS 253 >UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR family n=2 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJ83_ACIBL Length = 233 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%) Query: 117 ASTLEIFHQELFLSLNGVRQATDR--LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 AS E+ + ++S R+ D ++ ++++ L+ +RE+L+ ++ G M ++A Sbjct: 133 ASVREVLRGKTYVSPTIPREMIDLSLWQHKKLVDETHKLTDRQREVLQLLAEGKGMKEVA 192 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L +T+ HK+ +M LG ++A L++ A Sbjct: 193 AILNMTTRTVAFHKYRIMEVLGTKNNADLVKYA 225 >UniRef50_B1VE62 Two-component system response regulator n=3 Tax=Corynebacterium RepID=B1VE62_CORU7 Length = 248 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%) Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194 NQ +++ L+P E E+LR ++RGY+ ++AE+L ++KT+ H N++ K Sbjct: 181 GNQPNLDE---LTPREHEVLRLLARGYTYKEMAERLFISVKTVETHVSNILRK 230 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 44/77 (57%) Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190 L+G Q + + + LS E+EIL+F+ G S +IAE+L+ +++T+ H+ N Sbjct: 136 LSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAEKLQLSVRTVDNHRAN 195 Query: 191 VMSKLGVSSDAGLLEAA 207 +M +L V + A L+ A Sbjct: 196 MMRRLQVRNAAELVRMA 212 >UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=Roseiflexus castenholzii DSM 13941 RepID=A7NFQ1_ROSCS Length = 454 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LS EREILR ++ G + QIA QL + T++ H N+ K+GV+S Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVAS 55 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 11/139 (7%) Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------- 121 R+G+ L L + P+ + LV++ D E R+ +L + G L K S LE Sbjct: 80 RDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALR-AGAQGYLVKTSKLEEVIEGIRRI 138 Query: 122 -IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 L S+ G R L+P ER++LR ++ G S + A +L + Sbjct: 139 ATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTIS 198 Query: 181 IKTIRAHKFNVMSKLGVSS 199 KT+ H+ + +KLG S Sbjct: 199 PKTVETHRVRIYAKLGCKS 217 >UniRef50_B1ZJJ2 Transcriptional regulator, LuxR family n=7 Tax=Methylobacterium RepID=B1ZJJ2_METPB Length = 241 Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 31/47 (65%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194 + S L+P E E+LRF+S G+S ++A +L +++T+ H+ N+ K Sbjct: 155 DASAGLTPREAEVLRFLSAGFSNKEVARRLSLSVRTVETHRLNLRRK 201 >UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVU5_9SPHI Length = 209 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 36/49 (73%) Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 +S L+P+E++ILR +++G S QIAE+L + +T+ H+ N++SKL + Sbjct: 142 ESSPLTPSEKKILRLIAQGESTKQIAEKLFISERTVDKHRSNMISKLNL 190 >UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter RepID=C9XUX8_CROTZ Length = 238 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 34/49 (69%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 L+ +E+++LR + +G+ + QIA+ LK++ KTI A K + M +L + +A Sbjct: 153 LTTSEKQVLRLLGKGWGINQIAQMLKKSNKTISAQKNSAMRRLSLRGNA 201 >UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UQJ6_ROSS1 Length = 471 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LS EREILR ++ G + QIA QL + T++ H N+ K+GV+S Sbjct: 9 LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVAS 55 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 12/145 (8%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLI---------GSLSPSPLDGVLSKASTLEIF 123 GL CL L P R +++ + +AR + G + D VL +A ++ Sbjct: 64 GLECLKTLLANQPDLRVILLTMHE-DARYVKEGFALGAMGYVLKKAADDVLYQA-VRAVY 121 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 E+++ + + L + + R LS E+++L ++ GY+ +IAEQL ++K Sbjct: 122 SGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVK 181 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ +K+ +M KL + L++ A Sbjct: 182 TVETYKYRIMEKLNCKKRSDLVKFA 206 >UniRef50_A0JU95 Transcriptional regulator, LuxR family n=1 Tax=Arthrobacter sp. FB24 RepID=A0JU95_ARTS2 Length = 910 Score = 43.5 bits (101), Expect = 0.006, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 37/57 (64%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 L+ ER++ R S+G S ++A +L+ +I+T+ H + + +K+G+SS + L +A + Sbjct: 854 LTERERQVARMASQGLSNKEVANRLQLSIRTVEGHLYQIFTKMGISSRSELEGSAQV 910 >UniRef50_B4D016 Two component transcriptional regulator, LuxR family n=6 Tax=Verrucomicrobia RepID=B4D016_9BACT Length = 211 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%) Query: 129 LSLNGVRQATDRLNNQWYI-NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 LS + RQ + + + +S LSP E E+L ++ GY +IA++L+ ++T+R H Sbjct: 126 LSSHIARQVVQHFHEEGRLARESHHLSPREAEVLELLAAGYIYKEIADRLQIGLETVRTH 185 Query: 188 KFNVMSKLGVSS 199 N+ +K+ V S Sbjct: 186 VKNICAKMHVRS 197 >UniRef50_Q1LMP7 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LMP7_RALME Length = 191 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 33/56 (58%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 L+P ERE+L ++ G Q+A +L KTI+ H+ +VM KL V S L+ AD Sbjct: 126 LTPREREVLGWIVSGLRNKQVASELGTVEKTIKVHRAHVMQKLEVDSLPALVRIAD 181 >UniRef50_A6ARQ2 Transcriptional regulator, LuxR family protein n=3 Tax=Vibrio RepID=A6ARQ2_VIBHA Length = 211 Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust. Identities = 26/62 (41%), Positives = 34/62 (54%) Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 Y++ L+ E EI + M +G S TQIA Q +I TI+ H NV+ KL V S LL Sbjct: 146 YLSTKFLLTKRESEICKLMLQGLSNTQIARQSNVSINTIKTHASNVLHKLNVHSRYELLA 205 Query: 206 AA 207 A Sbjct: 206 MA 207 >UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis RepID=A5LFV2_PORGI Length = 227 Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 36/55 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+ E+E+++++ GYS + AE++ + +T+ H+ N++ KLG S+ A L+ A Sbjct: 164 LTQREKEVVQYLCDGYSAKETAEKMHLSYRTVETHRSNILHKLGFSNAAELIRYA 218 >UniRef50_B7UVM8 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7UVM8_PSEA8 Length = 230 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%) Query: 112 GVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171 GV++ A TL F++ +G+ T + S + E +++ + G S Sbjct: 120 GVIAHAKTLTSVAPRGFIATDGIGTFT-------FTPPSELFTSREWDVIYLLLSGLSEK 172 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVS 198 +IAEQ+ R++ T++ HK N+ K+G S Sbjct: 173 EIAEQISRSLSTVKFHKSNIFQKVGCS 199 >UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia RepID=A4TJY3_YERPP Length = 210 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 3/62 (4%) Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +N++R LS E +LR++ G S QIA+++ + KT+ +K +++KLG+SS ++E Sbjct: 144 VNRARLLSEREINVLRYLVNGLSNKQIADEMFISNKTVSTYKTRILTKLGLSS---VIEL 200 Query: 207 AD 208 AD Sbjct: 201 AD 202 >UniRef50_B8FQ55 Transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium hafniense RepID=B8FQ55_DESHD Length = 73 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 ++L+ E+++LR +GYS +IA+ L I T+R H ++ KLGVSS L++ Sbjct: 12 QSLTYREKDVLRLRVKGYSSKKIADSLTIEITTVRTHLKHIHRKLGVSSQVELIQ 66 >UniRef50_C5AJ00 DNA-binding HTH domain-containing protein n=13 Tax=Proteobacteria RepID=C5AJ00_BURGB Length = 281 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 22/52 (42%), Positives = 34/52 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 L+ E E++R G+S IAE+L + +T+RAHK ++ +KLGVSS + L Sbjct: 222 LTAREVEVVRLGLSGFSTRAIAERLTISFETVRAHKKHIYAKLGVSSQSELF 273 >UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae RepID=A3K876_9RHOB Length = 213 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%) Query: 114 LSKASTLEIFHQELFLSLNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSR 166 ++K+S ++ + +F +L G V +A R + LSP + EIL ++R Sbjct: 104 ITKSSDPKVLVEAIFGALRGQTVISPDVIEAIARDSISGIGTGLSDLSPRQTEILCLLAR 163 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 G+S +IA +L + KT+R + + + S LG+ +DA L+ Sbjct: 164 GWSAERIAGELSISQKTVRNNHYQIKSILGLETDAQLV 201 >UniRef50_B9Z3N9 Two component transcriptional regulator, LuxR family n=2 Tax=Chromobacterium group RepID=B9Z3N9_9NEIS Length = 217 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 9/74 (12%) Query: 140 RLNNQWYINQSRTL---------SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190 RL+ Q + +++ TL S ERE+L ++ G S +IA ++ + +T+ AH+ N Sbjct: 126 RLSIQQHKHETETLEVMQRLSRISGREREVLEMVADGLSSKEIARAMELSPRTVEAHRAN 185 Query: 191 VMSKLGVSSDAGLL 204 + SKLGV S A L+ Sbjct: 186 LFSKLGVDSLADLI 199 >UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS Length = 212 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+ ER++L+ + GY+ I+E+L +IKT+ H+ N+M KL V LL A Sbjct: 150 LTLRERQVLKLIDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCA 204 >UniRef50_C1M8K7 Predicted protein n=2 Tax=Citrobacter RepID=C1M8K7_9ENTR Length = 192 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 15/113 (13%) Query: 99 ARLIGSLSPSPLDG--VLSKASTLEIFH-----QELFL----SLNGVRQATDRL---NNQ 144 AR+I +++ P+ VL+ +T +F LFL SL+ + A R+ NNQ Sbjct: 64 ARIIRNMALRPVTKIIVLADEATFTLFQTVCGKNMLFLDQDASLDRLHHAVTRITKNNNQ 123 Query: 145 WYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196 I ++ E ++ ++RG+S+TQIA +++ KTI A+K N+ KLG Sbjct: 124 QNIKALHNKITANEFNVMMMLARGWSLTQIAGASQKSEKTIGAYKSNIARKLG 176 >UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1 Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1 Length = 216 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 11/165 (6%) Query: 43 SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLI 102 S S +DA+ +V + +R R +G+ E+ P TR L++ D++ L Sbjct: 37 SVPSGEDAVREALAVSVDVALLDIRMARMDGIEACAEIRRHRPDTRVLMLTTFDLDEYLF 96 Query: 103 GSLSPSPLDGVLSK--------ASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT-- 152 S++ G L+K + E+ +S R DR+ + Sbjct: 97 RSVAAGA-SGFLTKDTPGADVAGAIREVHSGRSVVSPRATRALIDRIARAAPDAAAVAAD 155 Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 LSP ER++L ++RG+S +IA +L T++ H ++ K+GV Sbjct: 156 LSPRERDVLALLARGFSNAEIARELFVAESTVKTHVSSLTRKVGV 200 >UniRef50_Q21Y82 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodoferax ferrireducens T118 RepID=Q21Y82_RHOFD Length = 230 Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 5/64 (7%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 TLSP E++I+ + +G S +QI QL + KT+ ++ +M+KLGV GL + L Sbjct: 146 TLSPREQQIIIMVVKGASSSQIGTQLHLSPKTVATYRSRLMAKLGVRDVPGL-----VRL 200 Query: 212 CMRH 215 +RH Sbjct: 201 AVRH 204 >UniRef50_A4AJ82 Putative LuxR-family transcriptional regulator n=1 Tax=marine actinobacterium PHSC20C1 RepID=A4AJ82_9ACTN Length = 532 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 32/54 (59%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 S LS ER I R + RG S QIAE L ++ T+++H N+ KLGV+S A Sbjct: 461 QDSFALSDRERAIARELVRGSSSAQIAESLYISVNTVKSHLKNIYRKLGVTSRA 514 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P EREIL+ ++ G + + L ++KT H+ +M+KLG+ S A L+ A Sbjct: 158 LTPREREILQLLAEGRKNRDVGKALNISVKTAETHRARIMAKLGIDSVADLVRYA 212 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 21/67 (31%), Positives = 42/67 (62%) Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 ++N N+S L+ E+ +L ++++G + +IA+ L + +T+ AH+ N+ +KLG+ S Sbjct: 141 IDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAHRRNMKTKLGIHSL 200 Query: 201 AGLLEAA 207 A L+ A Sbjct: 201 AKLISYA 207 >UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem domain,LuxR C-term domain n=1 Tax=Cupriavidus taiwanensis RepID=B3RBJ1_CUPTR Length = 223 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%) Query: 155 PTERE--ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 PT+RE ++R ++G +T+IA +L R++ T+ + K M KLGV ++ L+ A Sbjct: 163 PTQRELEVIRLFAQGAQLTEIAAKLGRSVSTVSSQKTVAMRKLGVQTNTALIRYA 217 >UniRef50_A8Y5U6 Putative response regulator n=1 Tax=Prosthecobacter vanneervenii RepID=A8Y5U6_9BACT Length = 169 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 13/107 (12%) Query: 108 SPLDGVLSKASTLEIFHQELFLS-------LNGVRQATDRLNNQWYINQSRTLSPTEREI 160 +P D V+ A+ ++ EL+LS LN D + + LS E EI Sbjct: 59 APPDQVV--AAIRQVLRGELYLSAAANLLMLNSFVSGKDHGSK----SMVEKLSDRELEI 112 Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +G + IA L+ ++KT+ AH+ ++ +KLG+S+ L+ AA Sbjct: 113 FELLGKGRGTSMIAHDLRLSVKTVEAHRSHIKAKLGISTAPELVRAA 159 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust. Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 15/170 (8%) Query: 48 QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSP 107 ++A+ + + V + + GL CL L P R L++ E + + Sbjct: 43 EEALEKAAKTPVDIALLDLSMPHMGGLECLRRLKAMQPAVRVLILTMHS-ERQYVCECLR 101 Query: 108 SPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN---QWYIN-------QSRTLSPTE 157 + +G L K + ELF +L V L + I+ + LS E Sbjct: 102 AGANGYLCK----DTLDAELFRALRTVAAGGRYLGEREAELLIDGALEEPEEPAALSTRE 157 Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 RE+L + GYS++ IA++L +IKT+ +K ++ KL + ++ L++ A Sbjct: 158 REVLELIVHGYSLSTIADKLYLSIKTVSTYKTRLLQKLDCTQNSELVDYA 207 >UniRef50_B1ZI39 Two component transcriptional regulator, LuxR family n=5 Tax=Methylobacterium RepID=B1ZI39_METPB Length = 222 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 TLS ER+ILRF++ G++ ++A++L K I K +KLG++S A +++ A IL Sbjct: 154 TLSERERDILRFVAFGFTSKEVADRLGATAKAIETQKARACTKLGLASRAQIVQFA-ILQ 212 Query: 212 CMRHCE 217 H E Sbjct: 213 GWLHGE 218 >UniRef50_Q89XB5 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89XB5_BRAJA Length = 207 Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust. Identities = 22/61 (36%), Positives = 37/61 (60%) Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 ++ + L+ ERE+LR +S GYS Q A +++ + +T +H+ M KLG + A L+ A Sbjct: 141 LSGQKRLTKREREVLRLISEGYSNKQGALRMQISPRTFESHRAEAMRKLGARNTADLVRA 200 Query: 207 A 207 A Sbjct: 201 A 201 >UniRef50_D0LDI8 Regulatory protein LuxR n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0LDI8_GORB4 Length = 271 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+P+ER +L F+ GY+ QIA L ++ T++ H ++ KL VS+ Sbjct: 211 LTPSERRVLDFLPSGYTADQIAGMLSVSVNTVKTHSRSIYRKLQVST 257 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P E++IL+ ++ G+S +IA++ ++ T+ H+ N+M KL + A L+ A Sbjct: 153 LTPKEKQILQLIAEGFSSKEIAKEFGLSLNTVHVHRNNIMRKLDIHKQAELVRYA 207 >UniRef50_A9HE32 Putative transcriptional regulatory protein n=1 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=A9HE32_GLUDA Length = 220 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%) Query: 131 LNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 L+ V A + QW +Q TLS ERE++ + G QIA +L ++ Sbjct: 120 LSAVSDAVETWWRQWRQDQGAADARQRYATLSAREREVMALVVAGLMNKQIAARLSLSVV 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLL 204 I+AH+ VM K+G S A L+ Sbjct: 180 AIKAHRSGVMRKMGADSLADLV 201 >UniRef50_C0YJJ8 LuxR family transcriptional regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YJJ8_9FLAO Length = 245 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 31/47 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LSP E E+L+F+ GY+ +IA+ L ++ T+ H+ N++ KL V + Sbjct: 189 LSPRELEVLKFVGEGYASKEIADMLSISVNTVSRHRQNILEKLKVKN 235 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 33/47 (70%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LS ERE+LR ++RGY+ ++A +L ++KT+ H +V+ KL +S+ Sbjct: 153 LSQREREVLRLIARGYAYKEVARELFISVKTVETHVSSVLRKLQLSN 199 >UniRef50_B3E9L1 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L1_GEOLS Length = 223 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LS E EI R ++RGY + +IA L +IKT+ +K + +K+G +A L+ A Sbjct: 163 LSRREMEIFRLLARGYMLKRIANDLGLSIKTVSTYKVRLSAKMGFKDNAALIRYA 217 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 40/172 (23%) Query: 54 ISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLV---------------------I 92 I A V S M GL + + +FPR R LV + Sbjct: 59 IDLAIVDLSMPGM-----NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYV 113 Query: 93 ADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT 152 D A L+ ++ G AS E + L LNG A Sbjct: 114 TKDGASAELVNAVRKVATGGAYVTASLAE----RVVLQLNGATTAPGHAQ---------- 159 Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 LS E E+LR + G +T IAE L ++KT+ HK + KL + + A L+ Sbjct: 160 LSDRELEVLRRIVAGERITDIAEALHLSVKTVSTHKSRIQEKLQLPTMAALI 211 >UniRef50_B9Z8S5 Two component transcriptional regulator, LuxR family n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z8S5_9NEIS Length = 208 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 18/193 (9%) Query: 25 ESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKF 84 +SL F G ++ + S E+F +F A+I +R G+ L LA + Sbjct: 17 DSLIWLFDGQGFQTTGFDSAEAFLAGPGPAAFNALIVD---LRLSGISGIVLLERLA-EH 72 Query: 85 PRTRRLVI--ADDDIEARLIGSLSPSPLDGV---LSKASTLEIFHQELFLSLNGVRQATD 139 P +++ A D+ + +L +D + L + Q L +Q D Sbjct: 73 PYCPPVIMLTAHGDV-PHAVAALKLGAIDFMEKPFDDGRLLAMVDQALLRD----QQERD 127 Query: 140 RLNNQWYINQSRTL-SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 R +NQS L + ERE+++ + G QIA++L ++KT+ H+ V K+GV Sbjct: 128 RFGRLSRLNQSLALLTEREREVMQLILAGKLNKQIADELAISMKTVEVHRSRVFDKMGVK 187 Query: 199 SD---AGLLEAAD 208 S AGL+ D Sbjct: 188 SAVELAGLMAVLD 200 >UniRef50_B4WXQ1 Transcriptional regulator, LuxR family protein n=1 Tax=Alcanivorax sp. DG881 RepID=B4WXQ1_9GAMM Length = 848 Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%) Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 F+ LF ++ A+D L ++ L+P E EI + G S QI+E ++ Sbjct: 765 FYTGLFPAVFNATPASDPLE----VDPDSVLTPKENEIFELLQSGMSNAQISECTGVSVT 820 Query: 183 TIRAHKFNVMSKLGVSS 199 T + H N+ SKLGVS+ Sbjct: 821 TTKWHLKNIYSKLGVSN 837 >UniRef50_D2Q2Q4 Transcriptional regulator, LuxR family n=2 Tax=Kribbella flavida DSM 17836 RepID=D2Q2Q4_9ACTO Length = 924 Score = 42.7 bits (99), Expect = 0.009, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 34/54 (62%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +P E +I+R + G + +IA+Q+ + +T+ AH + V KLG++S L+EA Sbjct: 861 FTPQELQIMRLAAAGLTNKEIADQIYLSHRTVAAHLYKVFPKLGITSRGQLVEA 914 >UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107 RepID=B3PDX5_CELJU Length = 225 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 13/164 (7%) Query: 46 SFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVI---ADDDIEARLI 102 + +A+ R+ V + + G+ + L +P +VI ADD+ ++ Sbjct: 49 TLSEALDRLHRQPVDLLMADLNLPDGHGIEAIQLLRRLYPEADAMVISALADDET---VL 105 Query: 103 GSLSPSPLDGVLSKASTLEIFH--QEL-----FLSLNGVRQATDRLNNQWYINQSRTLSP 155 G++ + +L A +LE+ QEL +S + R R+ + L+P Sbjct: 106 GAIEAGAVGYLLKDADSLELVEAIQELRAGRSPISSSIARILVRRMGGSTPATPTPELTP 165 Query: 156 TEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 E EILR +++G++ T++AE L + T+ H N+ KL ++ Sbjct: 166 RETEILRGIAKGFTYTELAEWLGISRHTVPVHIKNIYRKLAANN 209 >UniRef50_A1K8Y3 Two-component response regulator n=6 Tax=Proteobacteria RepID=A1K8Y3_AZOSB Length = 215 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 LSP ERE+ R +++G ++A L + KT+ H+ +VM K GV+S A L Sbjct: 152 LSPREREVARLVAQGLPNKRVARALGISEKTVHVHRQHVMEKAGVASAAEL 202 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 12/67 (17%) Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 ++ GV D+L+++ + E+LR + RG+ +IAE+L ++KT+ H+ Sbjct: 162 TIAGVASPVDKLSDREF------------EVLRLLGRGFGSREIAEELSLSVKTVETHRA 209 Query: 190 NVMSKLG 196 ++ KLG Sbjct: 210 HIKEKLG 216 >UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM Length = 226 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 35/59 (59%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 TL+ ERE+LR + G S++ IA + +R++KTI K + KLG+ +D L D L Sbjct: 167 TLTLREREVLRCFATGMSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVDKL 225 >UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=Gardnerella vaginalis RepID=D2RAB0_GARVA Length = 217 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 29/51 (56%) Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 ++ LSP E EI+R +GYS +IA+QL + T+ H + KL V S Sbjct: 152 KTSVLSPQESEIMRLCKQGYSSKEIADQLNVKVSTVNTHLRRIYGKLQVKS 202 >UniRef50_A6CG81 DNA-binding response regulator, LuxR family protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6CG81_9PLAN Length = 222 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 40/72 (55%) Query: 134 VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193 ++ +R+ NQ + + L+ ERE++ ++ G+S +IA L + KT+ AH+ +M Sbjct: 136 IKNKQNRIQNQDLMERKELLTRREREVMEYVVAGFSSREIAGTLNVSFKTVEAHRAKIMK 195 Query: 194 KLGVSSDAGLLE 205 K+ S L++ Sbjct: 196 KMQAKSVPKLIQ 207 >UniRef50_B4D4R4 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R4_9BACT Length = 195 Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust. Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 GL L L + R R ++ ++ RLI + G + K+ L+IF + L Sbjct: 47 GLEVLRALRAEM-REVRCMVYSGTLDRRLIVEALQARPHGFVHKSDPLKIFCEALRAVTE 105 Query: 133 GVRQ----ATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G AT ++++ +++ + + L+ ER IL+ ++ G S ++AE++ KT+ H Sbjct: 106 GCSYFTPFATKLMDDERHLHTAASHLTDRERAILQMIAEGMSNKEMAERISIAPKTVEHH 165 Query: 188 KFNVMSKLGVSSDAGL 203 + VM KLG+ A L Sbjct: 166 RAQVMQKLGMHDVATL 181 >UniRef50_A9BU27 Transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BU27_DELAS Length = 163 Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust. Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 6/77 (7%) Query: 133 GVRQATDRLNN---QWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G+R A + + + Q +++ +R+ LSP E+E+L + G++ +IA L + T+R Sbjct: 73 GLRNAVELVTHARRQGWLSAARSPLPLSPREQEVLAHVLAGHTSKEIARSLYLSDLTVRK 132 Query: 187 HKFNVMSKLGVSSDAGL 203 H+ N++ KLG++S A L Sbjct: 133 HRENILRKLGLTSTAQL 149 >UniRef50_C5BZU7 Two component transcriptional regulator, LuxR family n=43 Tax=Actinobacteridae RepID=C5BZU7_BEUC1 Length = 232 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 9/77 (11%) Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 F + F ++ G D L+ L+ ERE++R ++RGY+ ++A +L +IK Sbjct: 151 FVLDAFGAIGGDVATGDELDK---------LTAREREVMRLIARGYTYREVASELFISIK 201 Query: 183 TIRAHKFNVMSKLGVSS 199 T+ H V+ KL +SS Sbjct: 202 TVETHVSAVLRKLQLSS 218 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+ EREIL +++GY +IA++ ++KT++ H N++SKL VS Sbjct: 148 LTAREREILTLLAKGYDNQRIADESFISLKTVKTHVSNILSKLAVSD 194 >UniRef50_UPI0001C31904 transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C31904 Length = 206 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 11/144 (7%) Query: 60 IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 + +F ++RS + + +LA P TR +V+A+ A L+ LSK + Sbjct: 57 LLNFGSLRSP-----TEVRQLASAHPATRLIVLANRPTPAECNQMLAFG-ATACLSKETQ 110 Query: 120 LEIFHQELFLSLNGV----RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + L+ G+ R AT+ L + L+P E ++L + RG S +IA Sbjct: 111 ARDVLSAIHLASRGLHVLPRSATE-LAPPAQSPGPQLLTPREADVLAQLQRGRSNGEIAA 169 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSS 199 +L I+T+R H N+ KLGV S Sbjct: 170 ELHVGIETVRTHARNIYRKLGVGS 193 >UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 Tax=Cystobacterineae RepID=Q1D626_MYXXD Length = 223 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 136 QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195 QA +L N W L+P E E+LR++++G S ++ + +T+R H ++ K+ Sbjct: 150 QAEKKLENPW------ALTPLEFEVLRYVAKGLSNAEVGHVMTLERRTVRTHLSHIYRKM 203 Query: 196 GVSS 199 GV+S Sbjct: 204 GVNS 207 >UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JCS9_BURP8 Length = 236 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 Y+ Q LS E E+L + G +T+IA +L R++KTI A K M KL + SDA L Sbjct: 156 YVRQ--VLSRRELEVLTHYATGRGVTEIAMRLGRSVKTISAQKCTAMRKLSLQSDADL 211 >UniRef50_A7JTF8 Tetrathionate reductase regulon response regulator n=9 Tax=Gammaproteobacteria RepID=A7JTF8_PASHA Length = 215 Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 35/53 (66%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 L+ ER ++ + +G++ QIA++L +++T+ H+ NVM K+ S AGL++ Sbjct: 135 LTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESLAGLVQ 187 >UniRef50_UPI0001C33E7F two component LuxR family transcriptional regulator n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI0001C33E7F Length = 192 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 32/53 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 LS E E++ + GY++T+IA R++ TI K N M KL +SS + L++ Sbjct: 130 LSAREWEVIHLIVEGYTITEIASYRNRSVSTIATQKHNAMKKLNISSHSELIK 182 >UniRef50_C7PX21 Two component transcriptional regulator, LuxR family n=1 Tax=Catenulispora acidiphila DSM 44928 RepID=C7PX21_CATAD Length = 240 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 29/47 (61%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+P ERE+L+ M G + IA+ L + T+R H NV+ KLGV S Sbjct: 176 LTPREREVLQCMVSGMTRASIAQHLFLSPNTVRTHMQNVLGKLGVHS 222 >UniRef50_A3VTU0 Two-component response regulator n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VTU0_9PROT Length = 200 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%) Query: 134 VRQATD--RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191 +R TD + W Q L+P ERE+ ++ G + ++A +L + +TI H+ V Sbjct: 120 LRDGTDLAPMPEDW--PQLDALTPREREVALALNEGLTNKEVARRLGCSPRTIEVHRARV 177 Query: 192 MSKLGVSSDAGLL 204 KLGVS+ AGL+ Sbjct: 178 FHKLGVSNIAGLV 190 >UniRef50_Q1IY93 Transcriptional regulator, LuxR family n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1IY93_DEIGD Length = 197 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%) Query: 110 LDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169 L G+L A+ L + L SL D ++ TL+P ER++L ++ G S Sbjct: 94 LAGILGAAAGLAVLPPTLLPSL--FSAGEDEEEAALPLSGDVTLTPRERDVLALLAAGLS 151 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 + A +L + T++ H V SKLGV S A Sbjct: 152 NKRAARELGVSESTVKFHVQAVYSKLGVQSRA 183 >UniRef50_C0Z8M0 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0Z8M0_BREBN Length = 212 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 32/49 (65%) Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 + LSP ER+IL+ + +G++ TQI + L +TI+ H ++ K+GV + Sbjct: 150 KLLSPAERDILQLIHQGHTQTQIEQSLHITKRTIKNHINRILKKMGVKT 198 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 33/48 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200 L+ ER++ +++G ++ +IA +L + KT+ H+ N+M KLGVS+D Sbjct: 138 LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSND 185 >UniRef50_UPI0000382D84 COG2909: ATP-dependent transcriptional regulator n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382D84 Length = 122 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 9/64 (14%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS---------DAGL 203 LSP ER++LR +S G++ Q A + ++ TIR + KLGVSS +AG+ Sbjct: 21 LSPRERKVLRSLSEGFTAEQTAARFNVSVNTIRTQIRTLYRKLGVSSRREAVAVAQEAGI 80 Query: 204 LEAA 207 L AA Sbjct: 81 LAAA 84 >UniRef50_C6VU12 Transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VU12_DYAFD Length = 216 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%) Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + QE+ L L + D+ + + LS E EILR ++ YS +IA +L + K Sbjct: 128 YGQEVMLKL--AESSMDKYMQEPAPSTRDFLSKREIEILRLVASEYSTNKIASELCISDK 185 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ H+ N+ KLGV + GL + A Sbjct: 186 TVETHRRNLFQKLGVRNSVGLTKIA 210 >UniRef50_C2KQV5 Response regulator n=2 Tax=Mobiluncus mulieris RepID=C2KQV5_9ACTO Length = 220 Score = 42.4 bits (98), Expect = 0.012, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 37/71 (52%) Query: 137 ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196 A D + Y+ LS E +++R ++ QIA +L ++ T++ H ++M KLG Sbjct: 143 AADAAEGEEYVKSHGILSERELQVVRLVAEALENKQIASELDISVATVKKHVQSIMDKLG 202 Query: 197 VSSDAGLLEAA 207 + AG++ A Sbjct: 203 TDNRAGIVAKA 213 >UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms RepID=Q0K0R3_RALEH Length = 216 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LSP E E++R + G ++T+IA L R++ TI K + M KL ++++A L+ A Sbjct: 156 LSPREIEVVRMFATGSTLTEIAGYLHRSLATIATQKRSAMRKLNITTNADLVTYA 210 >UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=Congregibacter litoralis KT71 RepID=A4ABN5_9GAMM Length = 222 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 9/114 (7%) Query: 103 GSLSPSPLDGVL--------SKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ-SRTL 153 G SPS L G+L SK S +L L L G R L + Q TL Sbjct: 100 GVTSPSVLAGILEAGADAIFSKLSPARDMLAKLPLILMGERYVAPELTDIIRKGQQGETL 159 Query: 154 SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + ER++L + G S +IA++L + KT+ H+ +VM KL V S A L+ A Sbjct: 160 TGRERQVLNMIVMGKSNKEIAQELNISPKTVEKHRGSVMLKLEVHSVAQLMARA 213 >UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepID=A9JPW9_9PSED Length = 236 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 34/56 (60%) Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196 L++ W LS ERE+LR+ + G ++ ++A+ L +I+T++ H N +KLG Sbjct: 163 LSDSWQPQPQSPLSEREREVLRWAADGKTLNEVADILTLSIETVKFHTRNAGAKLG 218 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 38/55 (69%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P E+EIL ++ G + ++AE+L +IKT+ H+ ++M+KL + + A L++ A Sbjct: 150 LTPREKEILMLLAEGNTNREVAERLHLSIKTVGTHRQHIMNKLKLKNLADLVKYA 204 >UniRef50_D2U148 Two-component system, NarL family, invasion response regulator UvrY n=1 Tax=Arsenophonus nasoniae RepID=D2U148_9ENTR Length = 204 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 17/196 (8%) Query: 22 IGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELA 81 +G++S+F K G H + ++ Q R A +I R+ E + L L Sbjct: 1 MGMQSIFDKTKGMKIAGHVVSLNQAIQ--WCRKHTAEIILLNG--RTSDYELIKKLQSLI 56 Query: 82 IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS-KASTLEIFHQELFLSLNGVRQATDR 140 P ++ + + L+ +L G+LS KA ++ H + L + D Sbjct: 57 RMIPDIGIIMYSTEKKNIYLMKALEAGA-RGILSVKAKESDLLHAIRVVKLKQKYLSPDI 115 Query: 141 LNNQWYI---------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191 QW + N LS E +I+ ++RG + +IA+QL N KTI ++++ + Sbjct: 116 --AQWLVLHQLETEMSNPLNLLSDRELQIMLMVTRGVPVGEIAKQLNLNTKTINSYRYRM 173 Query: 192 MSKLGVSSDAGLLEAA 207 SKL V SD L A Sbjct: 174 FSKLKVRSDVELTHIA 189 >UniRef50_C0N928 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N928_9GAMM Length = 215 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 30/50 (60%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 N LSP E+E+L +S+GY+ +IA+ L + T+R + NV KL V Sbjct: 150 NSPDVLSPREKEVLLLVSKGYTSKEIAKMLDLSYYTVREYVSNVYKKLSV 199 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 33/55 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+ EREILRF++RG S +IA+ L + T++ H +M KL A L+ AA Sbjct: 197 LTDREREILRFVARGMSNEEIADDLVISPATVKTHLARIMGKLDAHDRAQLVVAA 251 >UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C2KAW8_9FLAO Length = 212 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 9/172 (5%) Query: 43 SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLV--IADDDIEAR 100 S + D + F VI + S+ LS ++EL P + LV + D+DI + Sbjct: 36 SYTNLTDQLHAEQFDLVILDINMPESKY---LSMISELKKIQPDLKILVFSVYDNDIAIQ 92 Query: 101 LIGSLSPSPLDGVLSKASTLE----IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPT 156 I + ++ + + + LE IF + S + V++ + N +LS Sbjct: 93 YIIEGADGYINKLCDENNILEAVGSIFETGTYYSPDIVKKLVSSAKKEAPANPLESLSER 152 Query: 157 EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 E+EI + +GY +I+ +L ++ T+ +K + KL + + L+ D Sbjct: 153 EKEIFDLLIQGYGNIEISNELNLHLSTVSTYKTRIYKKLNIKNTVDLVRLGD 204 >UniRef50_C0BE05 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE05_9FIRM Length = 533 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 31/47 (65%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 TL+P+ER +L++ GY++ +IA L +I T R H N+ KLG++ Sbjct: 460 TLTPSERMVLQYYVDGYTIQEIASLLYISIGTARKHNTNMNRKLGIT 506 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P E+++LR ++ G S QIA ++ + KT+ H+ N+M KL V S L++ A Sbjct: 157 LTPREQQVLRLVAEGSSTRQIAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYA 211 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 37/58 (63%) Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + TL+ E E+L+ +S G S IA++L +++T+ H+ N+M KL V + A L++ A Sbjct: 152 AETLTKRELEVLKEVSMGLSTKLIADKLFISVRTVETHRINLMKKLDVHNSAELIKKA 209 >UniRef50_C5CJZ9 Two component transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus S110 RepID=C5CJZ9_VARPS Length = 224 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 30/47 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LSP E ++LR +++G+S QIAE + ++ TI H N+ KL V S Sbjct: 163 LSPRELKVLRLIAQGWSNQQIAEAVSLSVNTIEFHAKNIYRKLSVKS 209 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 11/105 (10%) Query: 111 DGVLSKASTLEIFHQELFLSLNGVR----QATDRLNNQWYINQSRT-------LSPTERE 159 DG L K ++ +I Q + L G R + +D L + + + R LS E++ Sbjct: 100 DGYLLKNASRDILFQAMQTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQ 159 Query: 160 ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 +L+ ++ G+ +AE+L + KT+ HK N+ KLG +S A L+ Sbjct: 160 VLKLVAEGHGNKAVAEKLCISHKTVEKHKANLKRKLGTASTAELV 204 >UniRef50_Q1LDC8 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LDC8_RALME Length = 237 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 29/47 (61%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LS E EIL ++RGY+ +IA L ++ T+ AH N+ KL V+S Sbjct: 174 LSARESEILDLVARGYTYAEIARHLSISVNTVAAHIRNIYGKLAVNS 220 >UniRef50_A1SPZ4 Regulatory protein, LuxR n=1 Tax=Nocardioides sp. JS614 RepID=A1SPZ4_NOCSJ Length = 1006 Score = 42.0 bits (97), Expect = 0.015, Method: Composition-based stats. Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%) Query: 100 RLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTERE 159 R G L+ G L++AS ++ + L L + A R + L+P E E Sbjct: 897 RATGDLAGGRELGDLARASAHQLGARPLLDELRSIGSAPARTESV-----PDALTPRESE 951 Query: 160 ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +L+ +++G S +IA+QL + KT+ H N++ KL S G EAA I Sbjct: 952 VLQLVAQGRSNGEIAKQLFISAKTVSVHVSNILGKLDAS---GRTEAAAI 998 >UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Erwinia RepID=D0FXM2_ERWPY Length = 207 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 33/54 (61%) Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203 S L+ E EILR+++RG S +A L + KT+ AHK N+MSKL + A L Sbjct: 138 SNNLTRRETEILRYLARGISNGGVARFLNISEKTVSAHKRNIMSKLNMVRPAEL 191 >UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia RepID=C4KLT2_BURPS Length = 221 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 32/55 (58%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P E E++R + G S+T IA L R++ T+ K + M KL V ++ L+ A Sbjct: 161 LTPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCA 215 >UniRef50_Q2SEA9 ATP-dependent transcriptional regulator n=1 Tax=Hahella chejuensis KCTC 2396 RepID=Q2SEA9_HAHCH Length = 907 Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 L+P E E+LR + G S +IAE+L T+R+H +V KLG+SS Sbjct: 837 ALTPKEWEVLRLIGEGSSNERIAERLYVAPSTVRSHIKHVYQKLGISS 884 >UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18 Tax=cellular organisms RepID=B4SLZ0_STRM5 Length = 217 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 LSP E E+LR ++ G S +I E+++ + +T++AH ++M KLGV Sbjct: 149 LSPRETEVLRHVAGGLSNKRIGERMQISEQTVKAHMKSLMDKLGVGD 195 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 33/55 (60%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L+P ERE+L+ ++ G + A QL N+KT+ H+ +M KL + S A L + A Sbjct: 152 LTPREREVLQLIAEGNNAKNAAYQLNINVKTVDTHRQQIMKKLKMRSVAELTKYA 206 >UniRef50_C7BU28 Two component transcriptional regulator, luxr family n=1 Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949 RepID=C7BU28_PHOAA Length = 209 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 9/111 (8%) Query: 107 PSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSR 166 P D ++ S FHQ++F Q ++L ++ LS E E+++ + Sbjct: 108 PIDADLLIETVSNALSFHQKIFKQ----HQVYEQLKVKF-----SQLSDRESEVMKIILE 158 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 G + QIA+QL + +TI H+ N+ KL + S L++ ++L + C+ Sbjct: 159 GKTSKQIAQQLALSPRTIEVHRANIFHKLDIHSLPQLVKEYELLKSLSFCD 209 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 32/49 (65%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 LSP E +L +S+G +T+I EQ ++KTI ++ ++ KL ++S+A Sbjct: 149 LSPREMAVLLLLSKGVPLTRIGEQFHLSVKTISTYRARILEKLDLASNA 197 >UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2 Tax=Flexibacteraceae RepID=C6W5G0_DYAFD Length = 219 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 16/175 (9%) Query: 48 QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA------------DD 95 Q+ + R+ F ++ +G+ +FP + +V++ + Sbjct: 39 QELLDRLPANTPDIVFMDLQMPVMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEK 98 Query: 96 DIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ--WYINQSRT- 152 ++ L+ SP ++ + + E F+ F+S R+ +R N+ ++ N Sbjct: 99 GVQGYLLKDTSPDEVEKAIRRVHE-EGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVA 157 Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LS E+E+L+ + G S T+I ++L +++T+ H+ V+ K G S A + A Sbjct: 158 LSSREKEVLQLICDGLSTTEIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFA 212 >UniRef50_B8EBA2 Two component transcriptional regulator, LuxR family n=9 Tax=Shewanella RepID=B8EBA2_SHEB2 Length = 206 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 +NQ Y+ + L+P EREIL +++G +IA+ L ++T+ H+ N+M + V S A Sbjct: 129 DNQ-YLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGSLA 187 Query: 202 GLL 204 ++ Sbjct: 188 EMM 190 >UniRef50_C4UB72 Two-component response regulator n=1 Tax=Yersinia aldovae ATCC 35236 RepID=C4UB72_YERAL Length = 187 Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%) Query: 109 PLDG-VLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167 P+D VL + ++ + E L+ + R++ +L NQ LS ERE+ + +G Sbjct: 91 PIDADVLIETVSMALEQHEQSLTAHKQRESYQQLFNQ--------LSAREREVATLIIQG 142 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 + QIA L + +T+ AH+ N+ +KL V+S A L+ Sbjct: 143 ETSKQIAHTLSLSPRTVEAHRANIFAKLEVNSLASLI 179 >UniRef50_UPI0001BC30E6 two-component system, NarL family, response regulator DegU n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30E6 Length = 218 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 10/119 (8%) Query: 90 LVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ 149 ++I+D+D A+ + + DG +SK +EI + ++ G + L IN Sbjct: 80 IIISDND-NAKKMSYVIREGCDGFISKDCDVEILKRAVYSVYEGKKYIQPELEKFLNINV 138 Query: 150 SRTLSPTER---------EILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199 ++ P ER E+L +S+GY I+ +LK +T++ H ++ K+ V+ Sbjct: 139 TQEDDPEERIKNLTKREIEVLLLISKGYVNKDISNELKITERTVKNHVSSIFRKINVND 197 >UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14 Tax=Lactobacillus RepID=A5VJY7_LACRD Length = 217 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 23/55 (41%), Positives = 34/55 (61%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 LS E+EIL + GY+ +IA ++ + KT+ AHK +M KL ++S A LL A Sbjct: 155 LSKREQEILPLIVLGYTNKEIATKMFISPKTVEAHKTKIMQKLNLASHAELLHYA 209 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust. Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE-AADILL 211 L+P E L +++ GYS QIA +L +++T+ H+ N+ KL ++ A L++ A D +L Sbjct: 153 LTPKESATLAWLACGYSNKQIARELSMSVRTVETHRLNLRRKLRITGQAELVKYAIDHML 212 Query: 212 CMRHCETS 219 ++ + + Sbjct: 213 PLKKLQAT 220 >UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria RepID=A0M543_GRAFK Length = 212 Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust. Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 10/147 (6%) Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF-LSL 131 G++ + + +FP + L+ + E + ++ G +SK + E + ++ ++ Sbjct: 62 GINAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAA-GYISKHTDNETLEKAIYQVAR 120 Query: 132 NGV---RQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G+ R T++LN+ + I + + LS E E+L +S G IAE L N KT Sbjct: 121 GGIYLNRSITEKLNSGISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINEKT 180 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADIL 210 + +K ++ KL V + A L+ + +L Sbjct: 181 VSTYKTRLLKKLKVDNVADLITQSRLL 207 >UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1 Tax=Janthinobacterium sp. Marseille RepID=A6T252_JANMA Length = 248 Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 35/48 (72%) Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195 ++ + ++P E++IL+ ++ G S +IA+ L+ ++ T+R HK N+M+KL Sbjct: 183 SEDQAVTPREQQILKLVAAGKSSQEIADTLELSVFTVRKHKQNLMAKL 230 >UniRef50_D1ACQ9 Transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1ACQ9_THECD Length = 886 Score = 41.6 bits (96), Expect = 0.019, Method: Composition-based stats. Identities = 21/49 (42%), Positives = 31/49 (63%) Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 L+P EREI R ++RG S IA++L + T+ H N+++KLG S A Sbjct: 812 LTPREREIARLIARGLSNRGIADELVISPATVARHVANILAKLGFGSRA 860 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=... 231 1e-59 UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Ente... 189 8e-47 UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C... 181 1e-44 UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Kl... 181 2e-44 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 164 2e-39 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 162 1e-38 UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma... 160 4e-38 UniRef50_Q04UI4 Receiver component of a two-component response r... 159 8e-38 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 159 1e-37 UniRef50_B8E485 Two component transcriptional regulator, LuxR fa... 158 1e-37 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 154 2e-36 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 153 5e-36 UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa... 152 9e-36 UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa... 152 1e-35 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 151 2e-35 UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece... 150 3e-35 UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa... 150 3e-35 UniRef50_P69409 Capsular synthesis regulator component B n=164 T... 150 4e-35 UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa... 149 6e-35 UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece... 149 7e-35 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 148 1e-34 UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa... 147 2e-34 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 147 2e-34 UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa... 147 3e-34 UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa... 147 4e-34 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 146 5e-34 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 146 5e-34 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 146 6e-34 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 145 7e-34 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 145 8e-34 UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=... 143 3e-33 UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa... 143 3e-33 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 143 3e-33 UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10... 143 5e-33 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 143 6e-33 UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ... 142 9e-33 UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=... 142 1e-32 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 142 1e-32 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 141 2e-32 UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ... 140 2e-32 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 140 2e-32 UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece... 140 4e-32 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 139 5e-32 UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa... 138 1e-31 UniRef50_UPI000197BDC0 two component LuxR family transcriptional... 138 1e-31 UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin... 137 4e-31 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 135 1e-30 UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa... 134 2e-30 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 133 4e-30 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 133 5e-30 UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ... 133 6e-30 UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa... 132 7e-30 UniRef50_C3K5C3 Putative response regulator, receiver domain n=1... 132 1e-29 UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta... 131 2e-29 UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=... 130 3e-29 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 129 5e-29 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 129 6e-29 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 128 1e-28 UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ... 128 1e-28 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 127 3e-28 UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 126 5e-28 UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=... 126 7e-28 UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa... 125 8e-28 UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo... 125 1e-27 UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_A0NVX8 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi... 123 6e-27 UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ... 122 6e-27 UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ... 122 1e-26 UniRef50_B1T388 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_C6P0R1 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud... 119 6e-26 Sequences not found previously or not previously below threshold: UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR fa... 141 2e-32 UniRef50_Q2L102 Putative two-component response regulator of cap... 140 3e-32 UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12... 140 4e-32 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 138 9e-32 UniRef50_A6V170 Probable two-component response regulator n=1 Ta... 138 1e-31 UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 138 1e-31 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 137 2e-31 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 137 3e-31 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 137 3e-31 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 137 3e-31 UniRef50_B2U714 Two component transcriptional regulator, LuxR fa... 137 4e-31 UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa... 137 4e-31 UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa... 136 4e-31 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 136 6e-31 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 136 7e-31 UniRef50_B6VKY7 Pvp response regulator (Two-component response r... 136 7e-31 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 135 8e-31 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 135 9e-31 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 135 1e-30 UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba... 135 1e-30 UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 135 1e-30 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 134 2e-30 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 134 3e-30 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 133 3e-30 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 133 4e-30 UniRef50_Q1LG72 Two component transcriptional regulator, LuxR fa... 133 4e-30 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 133 5e-30 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 132 7e-30 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 132 8e-30 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 132 9e-30 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 132 9e-30 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 132 1e-29 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 131 1e-29 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 131 2e-29 UniRef50_A9AIC6 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algorip... 131 2e-29 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 131 2e-29 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 130 2e-29 UniRef50_Q04VJ6 Receiver component of a two-component response r... 130 3e-29 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 130 3e-29 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 130 3e-29 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 130 4e-29 UniRef50_B4STE5 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 130 4e-29 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 129 8e-29 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 128 9e-29 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 128 1e-28 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 128 2e-28 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 128 2e-28 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 128 2e-28 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 127 2e-28 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 127 2e-28 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 127 2e-28 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 127 2e-28 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 127 3e-28 UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 127 3e-28 UniRef50_A1BJU3 Two component transcriptional regulator, LuxR fa... 127 3e-28 UniRef50_Q3BU15 Two-component system response regulator, LuxR fa... 127 3e-28 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 127 4e-28 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 127 4e-28 UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular... 127 4e-28 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 126 4e-28 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 126 4e-28 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 126 4e-28 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 126 5e-28 UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei... 126 5e-28 UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa... 126 5e-28 UniRef50_A4W740 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 126 6e-28 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B3E9L1 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 126 6e-28 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 126 7e-28 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 126 7e-28 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 125 9e-28 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 125 9e-28 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_C5A924 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni... 125 1e-27 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 125 1e-27 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 125 1e-27 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 125 2e-27 UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa... 125 2e-27 UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 124 2e-27 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa... 124 3e-27 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 124 3e-27 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 123 3e-27 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 123 3e-27 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 123 4e-27 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 123 4e-27 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 123 4e-27 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 ... 123 4e-27 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 123 4e-27 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 123 5e-27 UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat... 123 6e-27 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 123 6e-27 UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25... 123 6e-27 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 123 6e-27 UniRef50_B4CYR7 Two component transcriptional regulator, LuxR fa... 123 6e-27 UniRef50_B3RA82 Response regulator protein; Response regulator r... 123 6e-27 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 123 6e-27 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 122 7e-27 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 122 7e-27 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 122 7e-27 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 122 8e-27 UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR fa... 122 8e-27 UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h... 122 8e-27 UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin... 122 8e-27 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 122 9e-27 UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece... 122 9e-27 UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa... 122 9e-27 UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_B2JLH9 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 122 1e-26 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 121 1e-26 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip... 121 2e-26 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 121 2e-26 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 121 2e-26 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 120 2e-26 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=... 120 3e-26 UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS 120 3e-26 UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=... 120 3e-26 UniRef50_Q46SR4 Two component transcriptional regulator, LuxR fa... 120 3e-26 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 120 3e-26 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 120 4e-26 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR fa... 120 4e-26 UniRef50_C7PJC5 Two component transcriptional regulator, LuxR fa... 120 5e-26 UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa... 120 5e-26 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 120 5e-26 UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa... 120 5e-26 UniRef50_P31802 Nitrate/nitrite response regulator protein narP ... 119 5e-26 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 119 6e-26 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 119 6e-26 UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa... 119 6e-26 UniRef50_C6XUH9 Response regulator receiver n=2 Tax=Pedobacter R... 119 6e-26 UniRef50_C1TL94 Response regulator containing a CheY-like receiv... 119 6e-26 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 119 6e-26 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 119 7e-26 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 119 7e-26 >UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=cellular organisms RepID=BGLJ_ECOLI Length = 175 Score = 231 bits (589), Expect = 1e-59, Method: Composition-based stats. Identities = 175/175 (100%), Positives = 175/175 (100%) Query: 51 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL Sbjct: 1 MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 60 Query: 111 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM Sbjct: 61 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 120 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 225 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY Sbjct: 121 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 175 >UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Enterobacter RepID=A4W681_ENT38 Length = 211 Score = 189 bits (479), Expect = 8e-47, Method: Composition-based stats. Identities = 95/192 (49%), Positives = 131/192 (68%) Query: 19 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78 MS+IG+E F + PY+LH + + +SF A++ I F +VI+S S R ERR L+ + Sbjct: 1 MSAIGLEHFFTTVSFRPYQLHLFKNFDSFNTALTYIPFFSVIYSLSDAREERRNCLAYMR 60 Query: 79 ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138 ELA K +R+++A D++EARLIG LSPS L G++SK+S+L ++L L+ Q Sbjct: 61 ELAFKHGAIQRIILASDEVEARLIGQLSPSRLHGIISKSSSLVDLRRQLITLLSETGQVN 120 Query: 139 DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198 W+ +R LSPTER +LR+MS G S+ +IAEQL+RNIKTIRAHK+N M KLGV+ Sbjct: 121 SNAFTHWHGCHTRMLSPTERTVLRYMSSGLSIPEIAEQLERNIKTIRAHKYNAMLKLGVN 180 Query: 199 SDAGLLEAADIL 210 SD GLL+AADIL Sbjct: 181 SDVGLLDAADIL 192 >UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter RepID=C9XUX9_CROTZ Length = 200 Score = 181 bits (460), Expect = 1e-44, Method: Composition-based stats. Identities = 88/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%) Query: 19 MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78 MS G+ SL + +L ++ +F A++ F+ VIFS R RR+ L ++ Sbjct: 1 MSGEGVRSLLQVNNSTSCRLEIFSDHHAFIQALTYRHFSTVIFSLEGTREHRRDCLQFVS 60 Query: 79 ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138 E+A +PR +R+V+ ++ EA+LI LSP+PL G++ K+ TL F EL +++ + + Sbjct: 61 EMAKAWPRMKRIVMVNNVNEAKLISQLSPTPLQGIIDKSETLSRFTDELMSAMSDSARVS 120 Query: 139 DRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197 + + WY +Q SR LSPTER ILR+++ GYS++QIA +L+RNIKTIRAHKFN M KLGV Sbjct: 121 ESPHKIWYASQGSRLLSPTERIILRYLTDGYSVSQIACRLERNIKTIRAHKFNAMLKLGV 180 Query: 198 SSDAGLLEAADILL 211 +DAGLL AADILL Sbjct: 181 HTDAGLLNAADILL 194 >UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Klebsiella RepID=C4X2X4_KLEPN Length = 224 Score = 181 bits (459), Expect = 2e-44, Method: Composition-based stats. Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 11/217 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 R+VA++EKCVM+ + +F + Y +H + + + A ++ +IFS S RS Sbjct: 8 RHVAIVEKCVMTEMAWRYIFSREDNRRYHIHLFKNVSMLRAAEIPFPWSTIIFSLSGSRS 67 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R E L + E+A P + +++A+++ E LIG L P+ L G+L+K++ + L Sbjct: 68 SRAESLLFVHEMARCRPEVQTIILANNESEMHLIGHLMPACLHGILNKSAPRRGLQECLL 127 Query: 129 L-----SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 L+G Q DR + LSPTE ILR+MS GYS++ IA QL RNIKT Sbjct: 128 QLLDNHHLSGSEQFCDREA------CNDPLSPTEHAILRYMSWGYSLSDIAIQLNRNIKT 181 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 IRAHKFN M+KLGV SD GLL AADILL + T++ Sbjct: 182 IRAHKFNAMTKLGVRSDIGLLNAADILLHLPLNSTTS 218 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 164 bits (416), Expect = 2e-39, Method: Composition-based stats. Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 12/217 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +AL++ + GI S+ + G ++H Q + + + A V+ + +R Sbjct: 4 IALVDDHRLFLEGIRSILDREIG--LEVHASVGQGVELLNLLKTTRADVV--LTDIRMPG 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GLS ++ FP TR + + D E + L + G L K E Q + Sbjct: 60 MDGLSLTRQICRSFPNTRVIALTMLDHEQDV-KDLLDAGARGYLVKNVEKEELVQAIHTV 118 Query: 131 LNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G R +Q +S L+ ER++L +++G + QIAE LK + T Sbjct: 119 ARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFT 178 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 I H+ N+ K+G+ S+ GLL+AA L +T N Sbjct: 179 IDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 162 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ G + + + + ++ FS Sbjct: 5 VIVADDHPLIIFGVRQALASAPGIRVVADAPD-PGALTELLRNVPCDVLVTDFSMPCGAT 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL+ LT L +FP R +V+ + A L+ S+ + G+++K L + + Sbjct: 64 PDGLAMLTSLRQRFPHVRVVVLTMLE-NAGLMVSMQDVGVLGIVNKRDDLSELPAVIAAA 122 Query: 131 LNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 R + ++ + +R LSP E E++R G S +++A L R+I Sbjct: 123 FRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSIN 182 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 TI K N M KLGVS+DA L + A Sbjct: 183 TISTQKTNAMRKLGVSNDAELFDYA 207 >UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group RepID=C4KWB3_BURPS Length = 210 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 7/203 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + +G+ + + + VI F+ Sbjct: 5 VLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAA-TPCDIVITDFAMPEQPA 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL+ LT + +P R +V+ D L+ ++ + VLSK L+ + L Sbjct: 64 ADGLAMLTAIRDGYPSVRVIVLTMLD-NPVLMHTMRQAGALAVLSKRGDLDELPRALAAV 122 Query: 131 LNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G + R LSP E E++R + G +MT IA + R+IKT+ Sbjct: 123 YQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKTVS 182 Query: 186 AHKFNVMSKLGVSSDAGLLEAAD 208 HK N M KLG+ SD L A Sbjct: 183 THKHNAMGKLGLKSDVDLFMYAT 205 >UniRef50_Q04UI4 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04UI4_LEPBJ Length = 233 Score = 159 bits (402), Expect = 8e-38, Method: Composition-based stats. Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 23/220 (10%) Query: 1 MEHSRIKKRN-----VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS 55 M HS+I ++ V++IE +++ ++ L + + H SQ++ +D I Sbjct: 1 MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQKAIEDIPENIP 60 Query: 56 FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS 115 VI + GL CL EL K P T+ ++ + E +++ ++ + G L Sbjct: 61 -DIVILDIGLPG---KNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQ-GGVSGYLL 115 Query: 116 KASTLEIFHQELFLSLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILR 162 K + E+F EL + + G T R+ N I + L+ + +IL Sbjct: 116 KDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQNTLGLTKRQLQILN 175 Query: 163 FMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202 F++ G ++ IA++L + T+ H + K+ V S + Sbjct: 176 FVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHSKSE 215 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 159 bits (401), Expect = 1e-37, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 13/208 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +VA+ + + G + +E++ D ++R+ ++ S E Sbjct: 3 DVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAY-DLVARVEPHVLLLDISMPPGE 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------LEI 122 GL ++ FP TR +++ + L +L VL +ST ++ Sbjct: 62 --NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKV 119 Query: 123 FHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 E ++ N + + +L+ Q + N LS E EI +++GY+ + A++L Sbjct: 120 ATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFI 179 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT+ H+ + +KLGV+S A L+ A Sbjct: 180 SVKTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4 Tax=Gammaproteobacteria RepID=B8E485_SHEB2 Length = 212 Score = 158 bits (399), Expect = 1e-37, Method: Composition-based stats. Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 7/203 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + G+ SL + + + +++ +I FS + Sbjct: 5 IILADDHPIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQHECDLLITDFSMPNDDN 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G++ + +L K+P +V+ ++ +L ++G+L K S + + Sbjct: 65 VDGMAMIKQLRRKYPNLPIIVLTQV-HNLGVLQALMQIGINGLLLKKSVIAELANTVKKV 123 Query: 131 LNG---VRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 L+G + A L N+ INQ T LS E E++R ++ G S+TQ+A L R++KTI Sbjct: 124 LSGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVKTI 183 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 K N M KLG+ SD+ L A Sbjct: 184 STQKTNAMQKLGLKSDSELFHYA 206 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 154 bits (389), Expect = 2e-36, Method: Composition-based stats. Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 8/202 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NVALI+ ++ G L G+ + Y S ++ +++ + + Sbjct: 5 NVALIDDHIVVRSGFAQLLS-LEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMPDE- 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GLS L L K P R ++++ D A + +L + + E+ + Sbjct: 63 --SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAV 120 Query: 130 SLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G D + + Q L+P EREI + G S+ IAEQL + KT+ Sbjct: 121 HAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVH 180 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 H+ NV+ KL ++ L+ A Sbjct: 181 VHRANVLDKLHCATTVELVHFA 202 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 153 bits (386), Expect = 5e-36, Method: Composition-based stats. Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 8/202 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NVAL++ ++ G L + + Y S + + + + Sbjct: 12 NVALVDDHIVVRSGFAQLLA-LENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE- 69 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GLS LT L + P+ R ++++ D A + +L + + E+ + Sbjct: 70 --SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVV 127 Query: 130 SLNGVRQATDRLNNQWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 S G+ D L+ + Q L+P EREI + G S+ IAEQL+ + KT+ Sbjct: 128 SSGGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVH 187 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 H+ N++SKL S L+ A Sbjct: 188 VHRANILSKLQCESTVELVHFA 209 >UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JIJ8_BURP8 Length = 235 Score = 152 bits (384), Expect = 9e-36, Method: Composition-based stats. Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 10/205 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G E KF G S E + ++ + + Sbjct: 7 VVVADDHPVILFGAEQALLKFQGIRVVARARQSTE-LVKILQTTPCDVLVTDLAMPGGQY 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 +GL + L FP +V+ + A L+ LS + V++K+ L + Sbjct: 66 GDGLPLIGYLRRNFPDLPIVVLTMLE-NAALLKRLSELGVISVVNKSDDLSHIGLAVQHV 124 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++S + N N LS E E++R G ++ +I+EQL R+IK Sbjct: 125 SRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIK 184 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 TI K M KLG+ D+ L + A Sbjct: 185 TISTQKNTAMRKLGLERDSELFQYA 209 >UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=A9BU04_DELAS Length = 217 Score = 152 bits (383), Expect = 1e-35, Method: Composition-based stats. Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 11/208 (5%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K +A+++ + +G++ + N + T+++ S V+ +S Sbjct: 4 KLRIAVVDDHAVVLLGVKDFL-EQDPNLQVVATFSTPSSLMQYARSNPLDVVLTDYSMPG 62 Query: 68 SE-RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + +GL + L FP + LV+ +I +L + + GVL K L Sbjct: 63 DDVYGDGLRYVDYLIRHFPDIKVLVLTTVS-NPMIISALYDAGVAGVLLKEDPLTQIMAA 121 Query: 127 L--------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 L + S + + + + ++ +LSP E E+LR + G S+T+IA +L+ Sbjct: 122 LQCVRLNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIAARLR 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 R++KT+ K + M KL V S+ L Sbjct: 182 RSVKTVSLQKNSAMRKLNVDSNQDLAAF 209 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 27/216 (12%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G + E++Q + +I S E Sbjct: 3 IVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRP-DVLILDLSMPPGE- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL ++++ FP T+ L++ D E L L +L + ++L L+ Sbjct: 61 -SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPD-----EQLILA 114 Query: 131 LNGVRQATDRLNNQW-------------------YINQSRTLSPTEREILRFMSRGYSMT 171 + V Q ++ + + + LS E EIL +++GY Sbjct: 115 VRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNK 174 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IAE+L ++KT+ AHK ++M+KL + S L+E A Sbjct: 175 DIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210 >UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM Length = 225 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 11/203 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQE---SFQDAMSRISFAAVIFSFSAMR 67 + + + + G+ GN + E S DAMS++ + FS Sbjct: 5 IVIADDHPVILAGVRE----ALGNEPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPG 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 + +G++ L L +F +V+ ++ S+ + + +++KA + + Sbjct: 61 GKYGDGVALLGFLRRRFAGIPLVVLTGVGGTQ-VLASIRKAGVACIVAKADPISELASAI 119 Query: 128 FLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + G + + Q L+ E E+LR ++ G S T+IA QL+R+ +TI Sbjct: 120 RAARKGEGYLSADVERQLASRPEGGEAHLTKREAEVLRLIAEGLSQTEIAAQLQRSRQTI 179 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 K + M KLG+ A + E A Sbjct: 180 STQKHSAMRKLGMQRPAEIFEYA 202 >UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4 Tax=Burkholderia RepID=B1Z6J3_BURA4 Length = 225 Score = 150 bits (379), Expect = 3e-35, Method: Composition-based stats. Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 8/206 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +S G+E + K + S ++ D++SRI V+ ++ + + Sbjct: 8 VIFANDRPLSLAGMEYVAGKANA-INLVGVCRSSDTLIDSISRIHCDVVLIDYAIRGNGK 66 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 REG++ L L +P+ +V+ + +I ++ ++ ++SK + + Sbjct: 67 REGMALLGYLRRTYPQVGMVVLVTHE-NPVIIQAILDLGVESLVSKLDDVGHIVTAIHAC 125 Query: 131 LNGVRQATDRL------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G + ++ + LSP E E++R G ++ QIA +L R TI Sbjct: 126 YGGGSYLSPQIKRSLASSGGDGRRPPLRLSPREIEVIRLYLSGMTINQIAGRLNRGKPTI 185 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADIL 210 + K + M KLGV D L+ A L Sbjct: 186 SSQKISAMKKLGVKGDVELVRYATCL 211 >UniRef50_P69409 Capsular synthesis regulator component B n=164 Tax=Enterobacteriaceae RepID=RCSB_ECO57 Length = 216 Score = 150 bits (378), Expect = 4e-35, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 90/204 (44%), Gaps = 11/204 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV + + + GI + + + + + + ++ +I S + Sbjct: 5 NVIIADDHPIVLFGIRKSLEQIEWVN-VVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127 +G++ + + FP +V+ + ++ ++ ++G++ K + L Sbjct: 64 YGDGITLIKYIKRHFPSLSIIVLTMN-NNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + V + ++++ Y + + LSP E E+LR + G+ +T+IA++L R+IK Sbjct: 123 LQKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 TI + K + M KLGV +D LL Sbjct: 181 TISSQKKSAMMKLGVENDIALLNY 204 >UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=B1K7T2_BURCC Length = 231 Score = 149 bits (377), Expect = 6e-35, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 7/202 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + IG + + + + ++ ++ ++ +E Sbjct: 9 IVIADDHPAVVIGARYELS-ATNTLAVVASANNSTELMETLANHPCDVLVSDYAMPGTEY 67 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL+ + + ++P R +V+ + A + +L + V+SK+ + + Sbjct: 68 GDGLAMFSAILKRYPNLRIVVMTMME-NAVALRALLDLGIACVVSKSDMTSHLTMAIHAA 126 Query: 131 LNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 R + ++ ++ LS E E++R + G S+ IAEQL R+ KTI Sbjct: 127 YTNGRYLSPSMDRILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTIS 186 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 K + M KLG+ D L+ A Sbjct: 187 TQKSSAMQKLGIERDVDLVRYA 208 >UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM Length = 199 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 11/198 (5%) Query: 19 MSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIFSFSAMRSERREGLS 75 M +G++S+ + LH + + + R ++ ++ +GL+ Sbjct: 1 MIRLGVQSVLDEA----PALHCIGAAQDSTELVALLQREPCDVLVTDYAMPGGAHGDGLA 56 Query: 76 CLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVR 135 L L FP+ R +V+ D + L+ L + G++SK L+ + + R Sbjct: 57 LLDYLGAHFPQLRIVVMTGLD-QPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMAAYANRR 115 Query: 136 QATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192 + + ++ ++ LSP E+E++ G S+ +IA +L R +T+ K N M Sbjct: 116 FLSPSVAEILDRREQRRATALSPREQEVVELFIAGLSVAEIARKLDRKKQTVSTQKNNAM 175 Query: 193 SKLGVSSDAGLLEAADIL 210 KLG+ DA LL A L Sbjct: 176 RKLGIERDAELLTFAADL 193 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 +++ ++ GI+ L + + + +E+ + +++ VI S Sbjct: 2 IVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALR-LLAQQPIDLVIMDISMPGMG--- 57 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-------HQ 125 GL+C+ E+ +P + LV++ + E + ++ + + ++ E+F Sbjct: 58 GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQG 117 Query: 126 ELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 +LS N + D R + + L+ ERE+ + GY++T+IAEQL ++K Sbjct: 118 RRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVK 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ HK ++ KL S + L+ A Sbjct: 178 TVDTHKKHIYEKLHCSRRSELVTLA 202 >UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4SSH8_STRM5 Length = 212 Score = 147 bits (372), Expect = 2e-34, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 89/204 (43%), Gaps = 10/204 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + IG ++ + +G + S ++ + ++ +S S + Sbjct: 5 IIIADDHPVVRIGTRAVI-ESSGVGRVVGEADSAQALMTLLGSQPCDLLVTDYSMPGSPQ 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G + + + + P L+++ ++ + S + G++ K+S+++ Q + Sbjct: 64 ADGFAMIGMIRRRHPDLPVLMLSV-SNNLAILRMVLDSGVLGLVDKSSSMDELPQAIQAV 122 Query: 131 LNGV----RQATDRLNN----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G R +R+ + + LSP E E+LR + G ++ +I+ QL +++ Sbjct: 123 YRGQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRLLGTGMTVKEISLQLHKSVS 182 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 TI K + M KLG+ DA L + Sbjct: 183 TISRQKGDAMLKLGLKGDAELFDY 206 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 147 bits (371), Expect = 2e-34, Method: Composition-based stats. Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 18/216 (8%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + E + G++SL + Q D R V+ S R + Sbjct: 9 IAEDHTLLREGLKSLLQSVPHLIVTGEASDGQ-MAVDLCDRNQPELVLMDISMP---RMD 64 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125 G+ + + P R LV+ + +L+ VL AS E + Sbjct: 65 GVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGG 124 Query: 126 ELFLSLNGVRQATDRLNN----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +++LS N Q + TL+P E+EI + ++ GY +IAE L ++ Sbjct: 125 KIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSV 184 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA---DILLCMR 214 KT+ H+ N+M KLGV S A L A I+L MR Sbjct: 185 KTVEKHRSNLMQKLGVHSAAELRALALERGIILRMR 220 >UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC Length = 213 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + + +G L + G S E ++ ++ VI FS + R Sbjct: 5 VVLADDHPIMLLGCR-LLIEQNGMEVVGEARDSSE-LMSILAHVACDVVITDFSMPNTGR 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLEI 122 +GL+ L+ L + +V+ + A L+ ++ + G++ K A+ Sbjct: 63 ADGLAMLSTLRREHGALPVIVLTNM-ANAGLLRAMLNEGVLGIVEKGAEKSELFAAVRTA 121 Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 +++S R+ T + ++ L+P E E+LR ++ G S T++ + L R IK Sbjct: 122 LRGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRLLASGKSPTEVGQMLHRTIK 181 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 T+ K + KLG+ SDA L E Sbjct: 182 TVSWAKTSAKRKLGLKSDAELYEY 205 >UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B1K7T3_BURCC Length = 241 Score = 147 bits (370), Expect = 4e-34, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 83/210 (39%), Gaps = 12/210 (5%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + V L + + G++ + + + ++ ++ Sbjct: 5 QIRVVLADDHPATLGGVQHGLSSVP-TIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPG 63 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +G++ + L +P + +V+ D +I L + ++SK+ ++ + Sbjct: 64 GAYGDGIALFSYLQRNYPAVKLVVLTMLD-NPAVIKGLLGLGISCIVSKSDAVDHLIPAV 122 Query: 128 FLSLNG----------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + G + + ++ ++Q++ LS E E++R + G ++ +IAE+L Sbjct: 123 HAAATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKL 182 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 R+ KTI K M KLGV D LL A Sbjct: 183 SRSKKTISTQKARAMQKLGVEKDIDLLRYA 212 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 12/205 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ L S+ + A + + ++ S S Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATT-LQPDLILLDLSLTNS-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 GL+ + L P+ R LV+ D E + +L+ VL +A+ E + Sbjct: 61 -SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVL 119 Query: 124 HQELFLSLNGVRQA-TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 EL++ R+ D L N +LS ERE+L ++RGY+ +IA QL + K Sbjct: 120 RGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ ++ M KLG+ S A L++ A Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQFA 204 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 146 bits (369), Expect = 5e-34, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 15/209 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G+ +L + G+ + S V+ Sbjct: 5 VMLVDDHALVREGLRALLERE-GDIEVVGETGSAAGVLALAEESRPEVVVMDLQL--GAG 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 R G+ EL K P + ++++ D E + +L VL +A E + Sbjct: 62 RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLK 178 E +L R+ + L + ++ L+ E E+LR + G + +IA +L Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT++AH+ N+M KLG+ L++ A Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYA 210 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 146 bits (368), Expect = 6e-34, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 14/207 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + GI +L K G +E+ + + I + Sbjct: 7 IVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRET-VTLVHTFAPDIAIMDITMPG--- 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 G +A + PRT+ L+++ E ++ +L +L A+T E + Sbjct: 63 LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVR 122 Query: 124 HQELFLSLNGVRQATDRLNNQWY---INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 E +LS + + R Q ++ L+P REI++ ++ G S +IA L + Sbjct: 123 KGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLS 182 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +KTI H+ ++M++LG+ AG++ A Sbjct: 183 VKTIETHRMHLMARLGLHDVAGVVRYA 209 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 145 bits (367), Expect = 7e-34, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 16/214 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD----AMSRISFAAVIFS 62 K + L + + G+ + E+ + A + + Sbjct: 26 AKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLD 85 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 + R GL EL+ +PR R L++ D E L +L VL + ++ Sbjct: 86 VAMP---RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDL 142 Query: 123 F-------HQELFLSLNGVRQA--TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 E FL + + + L+P E EIL+ ++ G+S +I Sbjct: 143 VQACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREI 202 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 A+ L ++KT+ H+ N+++KLG+ L A Sbjct: 203 ADTLFISVKTVERHRANILAKLGMKDRLELTRYA 236 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 145 bits (367), Expect = 8e-34, Method: Composition-based stats. Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L++ + G++ + A + + + A + + +I S Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMA-AEANPDIIIMDISMPG 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +G+ E+ K P R L++ EA L SL VL +A E+ H + Sbjct: 61 ---LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVH-AV 116 Query: 128 FLSLNGVRQATDRLNNQWYI-------------NQSRTLSPTEREILRFMSRGYSMTQIA 174 L +NG L + Y NQ+ LS E+E+L++++ GY+ +I+ Sbjct: 117 KLVMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEIS 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +L +IKT+ +K VM K+G + L+ A Sbjct: 177 TELFISIKTVDTYKKRVMEKIGSKKKSALVRYA 209 >UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK Length = 220 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 5/199 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + +S G+++ + + S D + + ++ + + Sbjct: 8 VVIADDHPVSVHGMKAALS-AMPTIEIVAVTSDTTSLVDMLDAHACDVLVLDYVMPSGKY 66 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G + L+ L+ +FP R + + + +L ++ ++SK+ + + + Sbjct: 67 GDGQTLLSYLSRRFPTLRYVTVTML-NSPAVFRALQELGVNSIVSKSDPMSHLIAAIHAA 125 Query: 131 LNGVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 +G R + + + +S TLS E EI+R GY +T+IAE+L R+ KTI A Sbjct: 126 HSGGRYLSPTIASLLERTESAAGATLSKRETEIVRLFREGYKVTEIAEKLHRSKKTISAQ 185 Query: 188 KFNVMSKLGVSSDAGLLEA 206 K M KLGV+SDA L+ A Sbjct: 186 KLAAMRKLGVTSDAELIRA 204 >UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL Length = 215 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 13/209 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +++ + + ++ + +H + + DA+S++ V+ FS R + Sbjct: 5 TISIADDHPFVLASMTAVLQGVPQFA-VVHQCANGKDLLDALSKVETDLVVTDFSMTRED 63 Query: 70 R-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL- 127 R +G L EL + P + +V+ + A + + ++SK ++ + Sbjct: 64 RSVDGFGLLAELRRRHPDVK-IVLLTALVNAGIFTRALSVGVGALVSKTDSISELARACA 122 Query: 128 --------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +LS V+ + L+P E E++R + G S+ QIA QL R Sbjct: 123 RVKISRSPYLSP-AVQSIIHGASMDHPNTSKARLTPKELEVVRLLVAGRSLAQIASQLGR 181 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 + TI K+N K+G +S L+ A Sbjct: 182 SPSTISTQKYNASRKIGATSYTQLIRYAY 210 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 93/211 (44%), Gaps = 17/211 (8%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF--QDAMSRISFAAVIFSFS 64 K+ V +++ + G++ + PY ++ + D +S+ SF V + Sbjct: 3 KRLKVLIVDDHTLFRKGLKEIL---LDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIA 59 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 G+ L ++ I +P T+ L+++ E I SL G L+K++ E Sbjct: 60 M---SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPEELL 115 Query: 125 QEL--------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + + +L + ++ I LS E ++ +++G S+ +I+++ Sbjct: 116 KAVDKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKE 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L +IKT+ ++ ++ KLG+ ++A ++ A Sbjct: 176 LSISIKTVSTYRARILEKLGLENNAEIINYA 206 >UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria RepID=A6V5P3_PSEA7 Length = 221 Score = 143 bits (360), Expect = 5e-33, Method: Composition-based stats. Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 20/232 (8%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M+ + K + L + + +G+ + + + ++ + I Sbjct: 1 MQEKPMSKLKIVLADDHPIVRMGVCDMLERDPRFE-VVGEASNPSELVSLYRQADPHIAI 59 Query: 61 FSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 +S ER +GL + L FPRTR L+ ++ SL + GV+ K+ Sbjct: 60 TDYSMPGDERYGDGLKLIDYLLRNFPRTRVLIFTMVS-NRLILDSLYDHGVAGVVLKSGE 118 Query: 120 LE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171 L+ + ++ + + A + N+ LS E E+LR G ++ Sbjct: 119 LDELLLALDVVLQNRIYRGAHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNNVC 178 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223 IA LKR++KT+ K + M KL V+SD L M C +N+ H Sbjct: 179 DIARLLKRSVKTVSTQKISAMRKLEVNSDQAL---------MTFCVRANLFH 221 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 143 bits (360), Expect = 6e-33, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 18/227 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K + L + + G+ +L A + ++ V+ Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADME-VAGEAANAMDAVALAQQLRPDVVLMDIGM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + + P + + ++ D E L +G + K S + Sbjct: 60 AGM---SSFEATRLIRKERPEVKVIFLSMYDDEDYLAE-CVDMGANGYILKDSPADQLIT 115 Query: 126 ELFLSLNGVRQATDRLNNQWYIN-------------QSRTLSPTEREILRFMSRGYSMTQ 172 + G + RL ++ + + TL+ EREIL+ ++ G S+ + Sbjct: 116 AIREVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKE 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 IA + ++KT+ AHKFN+M KL + + A L++ A +R ET+ Sbjct: 176 IAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222 >UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM Length = 223 Score = 142 bits (358), Expect = 9e-33, Method: Composition-based stats. Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 6/201 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +A+ + + +G + + G + ES ++ V+ FS R Sbjct: 5 IAIADDHPLVLLGTR-IVIEAGGRHRVVAEARCAESLLAVLAEEPVDLVVTDFSMPDGGR 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G + L L P+ ++ L ++ + + G++ K S ++ + + Sbjct: 64 SDGQAMLQALRRNHPKVPVILATMVTNATTLNMAMR-TGVRGLVCKGSGVDGIRRAVDTV 122 Query: 131 LNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 L+G + L + LSP E E+LR G S+T+IA QL+R + TI Sbjct: 123 LSGGIYLDPELAHCLQDAGRERSLSVLSPKELEVLRLYVSGPSITEIAAQLRRTVSTISR 182 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 + + M KLG+S+DA L A Sbjct: 183 QRISAMRKLGISNDAELFAYA 203 >UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas testosteroni CNB-2 RepID=D0IY57_COMTE Length = 201 Score = 142 bits (358), Expect = 1e-32, Method: Composition-based stats. Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%) Query: 21 SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80 +G+ L ++ +S E A+++ VI + S+ +G+ + L Sbjct: 2 LMGLGDLLKQNIHLTLTATASSSTE-LVAALTKSLPDIVIVDYHMPDSQYGDGIKFIGYL 60 Query: 81 AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL-EIFHQELFLSLNGVR---- 135 +F + +V+ ++ +L + + GV+ K E+F +SL + Sbjct: 61 LRQFEGLKVIVLTMLS-NPMIVKALYKAGVKGVVFKQDDPSEVFKAIRLVSLGNIYTPPS 119 Query: 136 --QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193 + L +Q + ++L+P E E+LR+ RG S+ +IAE+L R+IKT+ + K M Sbjct: 120 FLETNVSLQHQMLQERFKSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMR 179 Query: 194 KLGVSSDAGLLEAADILLCMRHCETSNVLH 223 KL S+ L M C S V H Sbjct: 180 KLEAKSNQEL---------MAFCLNSGVFH 200 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 142 bits (357), Expect = 1e-32, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 15/215 (6%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M H+R V +++ + G+ + AG +++ + A+ + ++ Sbjct: 1 MAHTR-----VVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAV-KDRPDVML 54 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + +G++ L P+ R +++ D + + + + G++ K Sbjct: 55 MDVHMP--QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHV-EKMLDAGVSGIVFKHDDS 111 Query: 121 EIFHQELF----LSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIA 174 + R+ R N + + LSP E E+L +++GY+ ++A Sbjct: 112 SEIVAAIQHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVA 171 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + L ++KT+ H+ ++M ++G+ S A L+ A Sbjct: 172 DALHISVKTVETHRQHIMRRIGLHSRAALVRYAYQ 206 >UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR family n=34 Tax=Proteobacteria RepID=A9AQJ5_BURM1 Length = 224 Score = 141 bits (356), Expect = 2e-32, Method: Composition-based stats. Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 6/205 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + S+IG+ + + + T ++ A+ ++ + + Sbjct: 8 VMVADDHPSSAIGMSRVLA-ESSTIELVGTVSNSTDLVAALEEKPSDVLVLDYVMPGGKF 66 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL L+ L ++P R + I D ++ ++ + +LSK+ + + + Sbjct: 67 GDGLVLLSFLQRRYPALRIVTITMID-NPSVLHAIRRQGVGCILSKSDAISHLVGAVHAA 125 Query: 131 LNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 L++ R L+ E E++R + G ++ +IA QL R+ +TI + Sbjct: 126 FVCADYQSPHIRHLLDSAGSSVTERRLTTREIEVVRLYAAGLTVGEIASQLHRSKQTISS 185 Query: 187 HKFNVMSKLGVSSDAGLLEAADILL 211 K + M KLG+ DA L+ AD + Sbjct: 186 QKASAMKKLGIVRDADLIRFADEGM 210 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 12/205 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ M G+ L ++ ++T ++ A +++ V+ S Sbjct: 4 VLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKA-NQLKPDVVLMDLSLPNG-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G + E+ P + +++ D E + +++ G + K S E+ Q + Sbjct: 61 LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGA-HGYILKNSHGELLFQAIVEV 119 Query: 131 LNGVR----QATDRLNNQWYINQSRTL----SPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G + + N W + ++TL + E+E++R + GYS ++A++L ++K Sbjct: 120 YRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVK 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ HK N+M KLG+ S L++ A Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYA 204 >UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS Length = 218 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 8/202 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + GIES+ + + + + + ++ +S Sbjct: 8 ILIADDHPAVLAGIESVL-EDKHEIEIVGRAKNSTEIISFLKKNECDVLVTDYSMPGGAY 66 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL L + +FP + +++ + +I SL+ + ++ K +L ++ + Sbjct: 67 GDGLVMLNVIRKRFPSVKIVMLTMIE-NIGIIKSLTNQGIYRIVHKTDSLGSLLPAIYAA 125 Query: 131 LNGVR----QATDRLNNQW--YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + A+ L +W + S LS E E+L G ++++IA++L R+IKT+ Sbjct: 126 YTDGQFISPSASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTV 185 Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206 HK VM+KLG+ D L+ Sbjct: 186 STHKVAVMNKLGIRKDIDLIRY 207 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 141 bits (355), Expect = 2e-32, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 17/209 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L+E + G+++L + + +A R++ V+ + + Sbjct: 7 VLLVEDHTIVREGLKALLTATEDLE-VVGEVADGRAAVEAAERLAPDVVVMDINMP---K 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ E+ K R L+++ D E + ++ G L K S L + Sbjct: 63 LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGA-SGYLLKGSGLSDLVTAIREV 121 Query: 131 LNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + + + + + +L+ ERE+L + G S +IA+ L Sbjct: 122 AGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILG 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KTI H+ +M+KLGV + AGL+ A Sbjct: 182 LSVKTIEGHRGRIMAKLGVHNVAGLVRQA 210 >UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14 Length = 212 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 10/207 (4%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + + + + + +G + + K G+ + + E + + ++ F+ Sbjct: 2 QLRIIIADDHPVVLLGAKIIVEK-GGSGLVVGQAENPEELEAILKSTPCDLLVTDFAMPN 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 S RR+GL L L P + +V+ + ++G L+ + GV+ K + + + Sbjct: 61 S-RRDGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNL-GIQGVVEKNADQFELIEAI 118 Query: 128 FLSLNGVRQATDR-------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 R + ++ + S LSP E E++R ++ G + Q+AE+L R+ Sbjct: 119 KKVARHQRYISPFFREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAEKLSRS 178 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IKTI K + +KLG+ +DA L + A Sbjct: 179 IKTISWTKVSAKTKLGIKTDAELYQYA 205 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 140 bits (354), Expect = 2e-32, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 15/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ L++ + G+ + + + + + + S V+ Sbjct: 4 DIVLVDDHKLVRDGVRMILERGSEF-LVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM- 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ TEL P + ++++ D E ++ ++ VL KAS+ E+ + Sbjct: 62 --NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTV 119 Query: 130 SLNGVR---QATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + G Q +DRL + + +LSP E ++LR ++ G + IA L Sbjct: 120 ARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLD 179 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++T+R+++ +M KLGV++ AGL + A Sbjct: 180 LGLQTVRSYRKTMMKKLGVNNVAGLTQLA 208 >UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1 Tax=Bordetella avium 197N RepID=Q2L102_BORA1 Length = 231 Score = 140 bits (354), Expect = 3e-32, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 6/202 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + GI+ F F + + ++ V+ ++ Sbjct: 5 IILADDHPALLAGIQHQFSNFP-TLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGRF 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G++ + L +P + +V D A + L+ + VL+K + + + Sbjct: 64 SDGMALILYLRRIYPNIKLIVFTAMDNGA-ISQELAKLGVHAVLNKVNDTNHLVSAIHAA 122 Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + ++ + LS E E++R G S+ +IA+QL R +TI + Sbjct: 123 YAGSTYYRPNQARTPRPEAEQSEFKPLSRRELEVIRLYISGLSVQEIADQLHRTKQTISS 182 Query: 187 HKFNVMSKLGVSSDAGLLEAAD 208 K + M KL ++ DA L A Sbjct: 183 QKSSAMRKLDITRDADLFRFAY 204 >UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21 Tax=pseudomallei group RepID=C4I5I0_BURPS Length = 242 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 11/205 (5%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + GIE K + T ++ D ++R +I ++ + Sbjct: 19 VADDHPALIAGIEHALSKSSAIS-VAGTASNSTELVDLLARERCDILITDYAMPGGSHGD 77 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLEIFH 124 GL L+ L P + +V D LI S++ +++K A+ ++ Sbjct: 78 GLGLLSFLRRHHPDLKIIVFTAID-NPALIASMARLGARAIVNKMDHIDNLIATVQAVYA 136 Query: 125 QELFLSLNGVRQATDRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 L A+ RL + R LS E EI+R G S+ +IA L R+ + Sbjct: 137 GASCLPAGIGAFASSRLPVDGEAPEIERQLSARELEIVRLYVSGLSVNEIAAYLHRSKQA 196 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAAD 208 + K N M KLG+ DAGL A Sbjct: 197 VSTQKMNAMRKLGIERDAGLFRYAY 221 >UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas RepID=Q4KHP5_PSEF5 Length = 220 Score = 140 bits (353), Expect = 4e-32, Method: Composition-based stats. Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 11/215 (5%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M+ + K + L + + IG+ ++ + + + +S + M I ++ Sbjct: 1 MKATTNNKLRIILADDHPIFLIGLRAVL-EQDDSLAIVGEASSPSALAQLMQEIECDVLV 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 F ++ +GL + +L + P +V+ + L S+ + G+LSKAS Sbjct: 60 TDFMMPAEQQNDGLRLIEQLRRRHPDLPIVVVTMLNH-PGLFRSILDLGVTGLLSKASLA 118 Query: 121 EIFHQELFLS-------LNGVRQATDRLN--NQWYINQSRTLSPTEREILRFMSRGYSMT 171 + + + ++QA + S LSP E E++R ++ G+++ Sbjct: 119 DELPTAIARARQHKPYIAQAIKQALSLAGEVGPDRLVSSDQLSPRELEVIRLLAAGHAVG 178 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +IA QL R+ +T+ A K + M KLG+SS+A L Sbjct: 179 EIAAQLNRSKQTVSAQKVSAMRKLGLSSEAALYIY 213 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 139 bits (351), Expect = 5e-32, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 16/208 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + G+ L + E+ + R+ ++ S R Sbjct: 6 IILADDHTVLRTGLRLLIDNQPDFT-VVGEAADGEALLALVERVPAEVLVLDLSMP---R 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123 GL C+ EL + + LV+ E + +++ L + +A E+F Sbjct: 62 VSGLECIKELKSRGQEIKILVLTMHGRE-YVKEAMAAGALGYIEKQALDSELFVAIRTVA 120 Query: 124 HQELFLSLNGVRQATDRL----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 ++S + D+L + L+ ERE+L+ + RG+++TQIA L Sbjct: 121 SGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHL 180 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KTI HK +VM KL ++ + L++ A Sbjct: 181 SVKTIDTHKTHVMEKLNLTHKSQLVDYA 208 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 138 bits (349), Expect = 9e-32, Method: Composition-based stats. Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 16/206 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +I+ + + + + + E+ Q R S++ V+ S R Sbjct: 21 VLIIDDHALLGESLARFLG--SNDMQAVWCGDLVEAMQSIRDR-SWSVVLLDLSMPRG-- 75 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL L + + P L+++ + + +L G L+K + ++ + + Sbjct: 76 -NGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALR-GGAAGYLTKGCSPDVLVEAIQKV 133 Query: 131 LNGVRQATDRLNNQWYI---------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 ++G R T + Q LS E ++ + G S+ Q+A++L + Sbjct: 134 VHGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISC 193 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ HK +M KL + +DA L+ A Sbjct: 194 KTVSTHKTRLMHKLALDNDADLVRYA 219 >UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI Length = 214 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 13/210 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K + + + + S G+ +L + + ++ ++ + Sbjct: 6 KSTTILIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLILLDINLP 65 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 R G+ +L +FP ++I +L L + G L K+++ + Sbjct: 66 ---HRNGVDIARQLRREFPHVGVVIITMYS-YQKLTEELRAVGVAGYLLKSASPDRLMTC 121 Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLK 178 L ++G + D+L N+ I+ T L+P E EI+R + G S +QIAE+L Sbjct: 122 LTSVVSG-KPFFDQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLF 180 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 + +TI+ H+ N+ KLG++S A L+ A+ Sbjct: 181 LSAETIKTHRKNIYFKLGINSVAALILFAN 210 >UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas aeruginosa PA7 RepID=A6V170_PSEA7 Length = 213 Score = 138 bits (349), Expect = 1e-31, Method: Composition-based stats. Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 10/207 (4%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K V L++ ++ IG+ L F + + + + +I Sbjct: 2 KTRVLLVDDHALTLIGMRCLLGAF-DDLQIVGQAQDADGLLTQLDTHPCDLLITDLMMPD 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 S++ +GL + ++ ++P+ + +V+ LI SL + G++SK L + + Sbjct: 61 SQQADGLRLVQKVRRRYPQLQIIVVTML-NNPALISSLLKLGIRGLVSKRGVLNDLPKAI 119 Query: 128 -------FLSLNGVRQATD-RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 FLS + + + L+P E E+LR G ++ +IA +L R Sbjct: 120 RHGGRRPFLSHSIGHLLDVGAAEHGKPLASLEELTPREVEVLRLYGSGLAIGEIALRLCR 179 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEA 206 + +TI A K + M KLG+ ++AGL Sbjct: 180 SKQTISAQKSSAMRKLGLDTNAGLYLY 206 >UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1 Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0 Length = 217 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 12/211 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK + L++ + G++ + L YT + + ++ + Sbjct: 1 MKKLKLVLVDDHPIVLSGLKDTLSQSMNLD-ILGAYTQDAELFAFLKKNEVDVIVTDYMM 59 Query: 66 MRS-ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 + + +G + + L ++P +V+ ++ L S + V+SK + L Sbjct: 60 PNNTQSSDGQNYIQFLRRQYPNIAVIVLTMVS-NPMIVQMLYDSGVSAVVSKEAPLGDLM 118 Query: 125 QELFLSLNG------VRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAE 175 + + L+ G V T L ++ + ++ +TLSP E E+LR +G + IA+ Sbjct: 119 KAITLAGQGRQYRVPVADMTTTLKSRNAVTLNDRVKTLSPRELEVLRLFVQGKPIVDIAK 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 QL R+ KTI K M KLGV ++ L+ Sbjct: 179 QLNRSDKTISLQKNAAMRKLGVDNNQALISY 209 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 138 bits (348), Expect = 1e-31, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 84/214 (39%), Gaps = 16/214 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K V + E + G+ SL + + + ++ V+ S Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIE-VVGEAENGREAIKMVEELAPDVVLMDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124 G+ +L K+P + L+++ E + +L ++ +++ ++ Sbjct: 60 PE---LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKA 116 Query: 125 ------QELFLSLNGVRQATDRLNNQ-----WYINQSRTLSPTEREILRFMSRGYSMTQI 173 + FLS + ++ Q LS ERE+L+ ++ G++ +I Sbjct: 117 IHAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREI 176 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 A L + KT+ AH+ ++ KLG++ A L + A Sbjct: 177 AGHLYISPKTVEAHRNHIQKKLGLNGTAELTKYA 210 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 137 bits (346), Expect = 2e-31, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 10/203 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ + + + E Q + +S ++ S Sbjct: 4 VIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQ-LVRELSPHVILLDLSMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 R GL + +L P R LV+ E ++ + + +++ E+ ++ Sbjct: 60 RNGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVA 119 Query: 131 LNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G + + LS E E+ R + G S+TQIA L + KT+ Sbjct: 120 AGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTV 179 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 +K +M KL + SDA L+ A Sbjct: 180 STYKMRLMEKLQLRSDAALVRYA 202 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 137 bits (345), Expect = 2e-31, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 79/205 (38%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G++ L A + E D R ++ + + Sbjct: 5 VFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEV-IDQCGRFAWDVAVLDYRMPGKG- 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + EL +FP LV++ + + L G L+K S E + Sbjct: 63 --GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAA-GYLTKESAPEDLVNAIRKV 119 Query: 131 LNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G R + L Q ++ S LS E +I+ ++ G + +IA+QL + Sbjct: 120 ARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPN 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 TI ++ ++ KL + S+A L+ A Sbjct: 180 TISTYRKRILEKLDLKSNAELMRYA 204 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 137 bits (345), Expect = 3e-31, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 16/213 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 KK + L + + G++ L +E+ D + + V+ + Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEA-IDRVDDLHPDLVLLDLTMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--- 123 + G+ C+ EL K + LV+ D E L L VL KA+ +E+ Sbjct: 62 ---KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAI 118 Query: 124 ----HQELFLSLNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 E+F+ R + + + LS E E+LR ++ G++ IA Sbjct: 119 RTVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIA 178 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + L ++KT+ +K VM KL + A L+ A Sbjct: 179 DLLHVSVKTVETYKARVMEKLEMHKRAELVRYA 211 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 137 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 17/217 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M S IK + + E + G++SL + + + + + + ++ Sbjct: 1 MTQSTIK---ILITEDHALVRKGLKSLISSRSEFQ-VVGEADNGLAAIEMTRKCKPDLIL 56 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S + GL+ + +L + P + LVI + LI +L +L Sbjct: 57 LDLSMP---KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQ 113 Query: 121 EIF-------HQELFLSLNGVRQATDRLNN---QWYINQSRTLSPTEREILRFMSRGYSM 170 E+F + +LS + Q + N + + +L+ E+E+ + ++ G + Sbjct: 114 ELFMAIRAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTN 173 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 QIA+ L + KT+ H+ N+M KL + S + A Sbjct: 174 QQIADLLFISPKTVDKHRTNLMKKLDLHSAREVSNFA 210 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 137 bits (344), Expect = 3e-31, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 9/202 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + G+ L +E+ + A ++ + S Sbjct: 10 ILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKA-AKTPVDIALLDLSMPHMG- 67 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL CL L P R L++ + L + E+F ++ Sbjct: 68 --GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125 Query: 131 LNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G + LS ERE+L + GYS++ IA++L +IKT+ Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVS 185 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 +K ++ KL + ++ L++ A Sbjct: 186 TYKTRLLQKLDCTQNSELVDYA 207 >UniRef50_B2U714 Two component transcriptional regulator, LuxR family n=5 Tax=Ralstonia RepID=B2U714_RALPJ Length = 215 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 7/203 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ L + + +G+ + +F + +E ++ I ++ ++ Sbjct: 6 SIVLADDHPVILMGLAAAIGQFPQQQVVAQAHDGRE-LMQVLAHIDCNVIVTDYNLGGEP 64 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ L L + PR +V L+ + + G++SK + Sbjct: 65 AFDGMQLLVRLRQQHPRCGIVVCTMV-HNPALLRGMRQIGVAGIVSKNDDFVHAGHAVMA 123 Query: 130 SLNGVRQATDRLNNQWYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + GVR + R+ + + + LS ERE+LR + G +++ IA+ L ++KT+ Sbjct: 124 AARGVRYDSPRILEEAGLGSNDRNGFERLSAREREVLRLYAAGTAVSDIAQMLGSSVKTV 183 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 K + KLG+ + L + A Sbjct: 184 STQKAVALRKLGLVREIDLFQYA 206 >UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia RepID=D0FMI8_ERWPY Length = 214 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 9/209 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + VA+ + ++ LF T + ++ VI FS Sbjct: 3 SRFTVAVSDDHPHIIHSLKMLFSNNDKFTIATETGCG-KDLLAVLASAQTDIVITDFSLS 61 Query: 67 RS-ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--IF 123 +G + + L+ +FP + +V+ ++ + ++SK+ +E + Sbjct: 62 SKRSAIDGFAKIRALSGRFPLVK-IVLLTSQKNIAILRKTCDYGVKAIVSKSDPVEDTVI 120 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKR 179 ++ +G ++ N + Y+++S L+P E E++R S GY++++IA + R Sbjct: 121 ACHHVMNQSGYYFSSSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIARRQNR 180 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 I T+ K+N M +LGVSS+ L+ A Sbjct: 181 TISTVSTQKYNAMRRLGVSSNVELIRYAY 209 >UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6 Tax=Ralstonia RepID=B2UFA9_RALPJ Length = 222 Score = 137 bits (344), Expect = 4e-31, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 12/207 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + L G + ++ + ++R+ I ++ S Sbjct: 7 LVIADDHPGVVAAVRRLVSGVHGFE-VVGEASNADELLAVLARVRCDLAITDYAMPGSRY 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ L L + P R +V+ + A L+ ++ + + ++SK+ + + + + Sbjct: 66 GDGIILLEFLMRRHPDLRVMVLTMLETRA-LMSNILRAGIKVIVSKSDEPQHILEGMQAA 124 Query: 131 LNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 ++G + LN + + + L E E+LR G ++++IA+QL R+ Sbjct: 125 VDGRIYLSPLLNAKLLCRNGEPQPAHDDPVAKLGKRELEVLRMYVTGKTVSEIAQQLNRS 184 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +KTI + K M KL + ++A L + A Sbjct: 185 VKTISSQKQTAMRKLELGNEAALFDFA 211 >UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LDE9_RALME Length = 214 Score = 136 bits (343), Expect = 4e-31, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 8/203 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + GI G ++S E + ++ +S S Sbjct: 4 VLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTE-LLRLLDTTQCDVLVTDYSMPGSAT 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL L + + P R +VI D L+ ++ + + +LSK+ L + + Sbjct: 63 GDGLPMLQLIRRRHPAVRIVVITMLD-NPALLRNIQKAGISVILSKSDHLGHLAPAIRAA 121 Query: 131 LNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G+ + + LS E E++R + G + +IA Q R+ KTI Sbjct: 122 FVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKTI 181 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 A K M KLG++SD L + A Sbjct: 182 SAQKSMAMRKLGLTSDYELYQYA 204 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 136 bits (342), Expect = 6e-31, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 11/204 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ +++ V+ G++ + + ++ + M I S Sbjct: 14 HILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALE-VMRHQPIDLAIVDLSMPGM- 71 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL + + +FPR R LV++ E + + V ++ E+ + + Sbjct: 72 --NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKV 129 Query: 130 SLNGVR-------QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G + +LN LS E E+LR + G +T IAE L ++K Sbjct: 130 ATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVK 189 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 T+ HK + KL + + A L+ Sbjct: 190 TVSTHKSRIQEKLQLPTMAALIRY 213 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 11/203 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L+E ++ G+ L + G + S + + ++ I S Sbjct: 4 VVLVEDHLLVRSGLRHLL-EARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G++ L +FP R L ++ + + G L G +SKA+ + + Sbjct: 61 -TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGG-QGYVSKAAVDQELLDAVLAV 118 Query: 131 LNGVRQATDRLNNQWYIN------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G R L + + + LSP E E+LR +++G S ++AE+L + KT+ Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 ++ M KLG++S + LL A Sbjct: 179 ATYRERGMEKLGLASRSELLRYA 201 >UniRef50_B6VKY7 Pvp response regulator (Two-component response regulator bvg protein) n=2 Tax=Photorhabdus RepID=B6VKY7_PHOAA Length = 208 Score = 136 bits (342), Expect = 7e-31, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 83/202 (41%), Gaps = 2/202 (0%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 R V + + + +G+ ++ N + + + +I F+ Sbjct: 3 RRVIIADDHPVFLLGLRTVLATLPENYQVVGEAHDVTALFSLLEEKEVDMLITDFNMPGD 62 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 + +GL ++ + ++P +VI ++I SL + +L+K S + L+ Sbjct: 63 NQIDGLRMISRIRERYPSLPIVVITMISDR-KIIASLIDYKVKAILNKNSLSHELVKGLY 121 Query: 129 LSLNGVRQ-ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 + +++ + L+ E E+++ + +G S+ IA +L R +TI A Sbjct: 122 STTGCHEPYLSEQFLESPGEEVVKALTSKELEVIKLLGQGLSVNDIAARLYRTKQTISAQ 181 Query: 188 KFNVMSKLGVSSDAGLLEAADI 209 K + M KLG++++A L Sbjct: 182 KISAMKKLGLNNEAALYNYLHQ 203 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 135 bits (341), Expect = 8e-31, Method: Composition-based stats. Identities = 39/208 (18%), Positives = 78/208 (37%), Gaps = 15/208 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 VAL + + GI +L + E+ + + S Sbjct: 7 VALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADP-DVAVVDVSMPG--- 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL +A PRTR LV+ + A + L +L +++ ++ ++ Sbjct: 63 LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVA 122 Query: 131 LNGVRQATDRLNNQWYINQ-----------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G+ ++ + LSP E ++LR +++G+S +IA + Sbjct: 123 AGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDL 182 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++K+I +K KLG+ + A ++ A Sbjct: 183 SVKSIETYKARAAEKLGLRTRAEIIRYA 210 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 135 bits (341), Expect = 9e-31, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 17/212 (8%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L + + G+ +L + + + Q A ++ VI S Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAED-LAPDIVILDLSMPE 64 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 GL +A PR+R L++ + E + +L + + G + K + Sbjct: 65 ---LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREAL-AAGVRGYILKTDAGRDLANAV 120 Query: 128 FLSLNGVRQATDRLNNQWYINQ------------SRTLSPTEREILRFMSRGYSMTQIAE 175 + G RL Y + L+P EREIL+ ++ G + + Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L ++KT H+ +M+KLG+ S A L+ A Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYA 212 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 16/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV L + + G+ +L Q++ A + +I S Sbjct: 4 NVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARE-LHPEIIIMDISMP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ ++ P + + ++ +IG L G L K E + Sbjct: 60 DMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGA-SGYLLKDCAFEELVNAIQT 118 Query: 130 SLNGVRQATDRLNN---QWYINQ--------SRTLSPTEREILRFMSRGYSMTQIAEQLK 178 L+ + + + + Y+++ S L+P ERE+L+ ++ G S QIA L Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT+ H+ N+ KLGV S A L++ A Sbjct: 179 VSVKTVETHRRNITQKLGVGSVAELIKYA 207 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 17/210 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 VA+ + V+ G+ ++ + N ++ + + D + ++ Sbjct: 5 VAIADDHVLFRKGLVTIL-ELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMP---V 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ + K+P + LV++ D E +I L +L E+ H + Sbjct: 61 MDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVM 120 Query: 131 LNGVRQATD-------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 R + S L+ E+E+L + + + ++AE+L Sbjct: 121 AKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKL 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +T+ H+ N++ K G + AGL+ A Sbjct: 181 FISNRTVEGHRKNLLEKTGAKNTAGLVVFA 210 >UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus RepID=B2G7N1_LACRJ Length = 217 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 85/210 (40%), Gaps = 15/210 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV + + + GI L T + +++ + + +I S E Sbjct: 3 NVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIR-VEQGGIDILIMDLSMPPGE 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122 GL + KFP+ + ++++ + + + +++ + +L + E + Sbjct: 62 --NGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYILKSSPDSEIVNGLKHV 119 Query: 123 FHQELFLSLNGVRQATD-----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + E +L N + D N + LS E+E+ ++ GYS +I++++ Sbjct: 120 INGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQKM 179 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ AHK N+ KL + L++ A Sbjct: 180 FISTKTVEAHKANISRKLHLHGRVELVQYA 209 >UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS Length = 231 Score = 135 bits (340), Expect = 1e-30, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 12/215 (5%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 H + +V L + GI + ++ + F ++ Sbjct: 7 HRKDLNISVLLADDHPGIISGIRHELSSEL-EILLKASVSNSTDLVKKLDEGGFDVLVSD 65 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 +S + +GL+ ++ +FP +V+ D A ++ +L ++SKA + Sbjct: 66 YSMPTGQYGDGLNLFGYISRRFPNLGLVVLTMLDNSA-ILQALGKVSNISIVSKADPVLH 124 Query: 123 FHQELFLSLNGVRQATDRLNNQWY----------INQSRTLSPTEREILRFMSRGYSMTQ 172 + + G + ++ + LSP E E++R + G + + Sbjct: 125 LVPAIHAAYTGGTYFSPAISERLEKMNAGVMGGEGKSPGVLSPKESEVVRLYAAGLRIDE 184 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IA +L R+ KTI K M KLG+ D L++ A Sbjct: 185 IAAKLNRSKKTISTQKVKAMHKLGIERDIDLMKYA 219 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 135 bits (339), Expect = 1e-30, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 12/210 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK V +++ + G+ + A ++ V+ S Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMA-QKMRPDVVLLDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST------ 119 GL CL L P R +++ + + + + VL KA+ Sbjct: 60 PEM---SGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQA 116 Query: 120 -LEIFHQELFLSLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQL 177 ++ E+++ + + L + + R LS E+++L ++ GY+ +IAEQL Sbjct: 117 VRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT+ +K+ +M KL + L++ A Sbjct: 177 VISVKTVETYKYRIMEKLNCKKRSDLVKFA 206 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 22/219 (10%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK N+ L++ + GI++ + + + + +A+ ++ VI + Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNF-HIVGEAANGLDGIEAVKQLKPDVVIMDITM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ ++ K+P ++ L+++ D E ++ S+ G L K + F + Sbjct: 60 PEM---SGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAY-GYLLKDVDKDEFIK 115 Query: 126 ELFLSLNGVRQATDRLN-----------------NQWYINQSRTLSPTEREILRFMSRGY 168 + NG + ++ Y N L+ E+ IL+ ++ G Sbjct: 116 AITAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGK 175 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +IA+ L +I+TI H+ N+M KL V + L+ A Sbjct: 176 NNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIA 214 >UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC Length = 246 Score = 134 bits (338), Expect = 2e-30, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 10/214 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +K N+ + + M G+ +F +T +S +I ++ Sbjct: 31 RKINIVVADSYPMIVQGLRHVFSSVENMRIVAEAHT-LSGMASLLSSCECDVLICDYAFG 89 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST------- 119 +G+ L + P + +++A+ + L V+ + Sbjct: 90 DDPGPDGMRMLETIRRNHPNVKIILLAELRDGLSVQRVLKKGVSAFVVKSSDDSLSLPKI 149 Query: 120 -LEIFHQELFLSLNGVRQ-ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 ++ + ++ D + ++ LSP E +++R +SRG ++ +IA +L Sbjct: 150 VDKVMRGKRYVDPGIAGDMLCDSGRGSDWQARTNLLSPRELDVVRLLSRGMAVGEIAVKL 209 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 R+ KTI K N M K GV ++ L++A +L Sbjct: 210 SRSRKTISTQKANAMKKFGVKTNVDLVDAVRDML 243 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 134 bits (337), Expect = 3e-30, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 12/209 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK + L + ++ GI ++ G + E+ A+ R+ V+ + Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEA-ISAIQRLQPDVVLLDIAM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ + P T+ LV++ D +I + ++G L K L Q Sbjct: 60 PG---PSGIEVARTIRQFDPNTKILVLSSVD-RPEIIEQALAAGVNGYLLKDFVLAELLQ 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLK 178 L + L+G R + ++ + + L+ + EILR ++ G + +IA L Sbjct: 116 ALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLG 175 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ H+ +M ++GV GL A Sbjct: 176 ISPKTVEFHRSRLMERIGVHDVTGLTRFA 204 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 133 bits (336), Expect = 3e-30, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 82/206 (39%), Gaps = 14/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + V+ G+ + + +E+ + + S Sbjct: 4 VLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCP-DVAVVDISMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL ++ L + P L++ + E ++ ++ + G ++K S E + Sbjct: 60 IDGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAM-GYMTKKSAPEQLVTAIRKL 118 Query: 131 LNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +G R T+ + SR +LS E ++LR ++ G++ +IA+ ++ Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ ++ ++ KL + ++A + A Sbjct: 179 KTVDTYRARLLKKLNLRNNADISRFA 204 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 46/208 (22%), Positives = 78/208 (37%), Gaps = 16/208 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + M G+ L K G E+ A R+ + + R Sbjct: 5 VLLADDHEMFLEGLRELLGKADGIELAGLARDGAEA-VAAAERLQPDVALMDMTMP---R 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ ++A P T+ LV++ + ++ SL G + K + + + Sbjct: 61 LNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGA-RGYVLKECSSQELCLAIQTV 119 Query: 131 LNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 NG T RL LS E ++L+ + +G + QIAEQL Sbjct: 120 ANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSI 179 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + T+ H+ +++ KLG +S A L A Sbjct: 180 SKNTVDTHRRHILDKLGCNSMAELTRYA 207 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 8/204 (3%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + V L++ + G+ L R G + + E+ + VI + Sbjct: 3 TRTRVVLVDDHSLVRRGLAVLLR-LDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 +GL L + K TR LV++ D E L+G + DG L K S + Sbjct: 62 G---IDGLETLRRVRAKGLTTRVLVLSMHD-ETHLVGQALSAGADGYLLKDSMDDELFFA 117 Query: 127 LFLSLNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + L G R DR Q + +L+ ERE+L+ ++ G + + +AE L + T Sbjct: 118 IESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHT 177 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 H+ N+M KL V + L+ A Sbjct: 178 ATRHRANLMQKLNVHNQVELVRIA 201 >UniRef50_Q1LG72 Two component transcriptional regulator, LuxR family n=3 Tax=Cupriavidus RepID=Q1LG72_RALME Length = 217 Score = 133 bits (335), Expect = 4e-30, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 11/207 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69 VAL + + + + ++ G T+ DA+++ + FS Sbjct: 8 VALADDHPLVVVALRDCLQRTPGFQVTCEC-TNGSELVDALTQNPVDVAVTDFSMGHGDT 66 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF- 128 +G + L +L + P TR +V++ ++ +SK L+ + Sbjct: 67 SLDGFNLLRKLHRRHPDTRIVVVS-AQTNPGVVSRAMKLGARAFVSKEDELDEIVRACIH 125 Query: 129 -------LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +R D + L+ E +++R ++G+ +T+IA +L R++ Sbjct: 126 VTVSNGHFYSPSIRAVLDSATAAATAAPATDLTLRELDVVRLYAQGFQLTEIANKLGRSV 185 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208 TI + K M KL V ++ L+ A Sbjct: 186 STISSQKTVAMRKLSVQTNTDLIRYAY 212 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 21/208 (10%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + E + G+ +L + + + + ++ V+ S Sbjct: 5 ILIAEDQQLVRQGLVALL--AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPE--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ + P+ R LV+ + E R+ +L+ L K H EL + Sbjct: 60 LDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLG-----HGELMAA 114 Query: 131 LNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQIAEQLKR 179 +N V L + + +L+ ERE+L+ ++RG+ +IA++L Sbjct: 115 INAVCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGI 174 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IKT+ H+ +M KL + + A L A Sbjct: 175 AIKTVETHRTKIMQKLDLHNSAELAAYA 202 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 133 bits (334), Expect = 5e-30, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 13/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + + G+ SL K A E+ + A+ + S Sbjct: 4 VMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRP-QVAVIDISMPE--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + + K P + LV+ + + +I + +L +++ E+ L+ Sbjct: 60 LNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALA 119 Query: 131 LNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + ++ + + + L+ ERE+ + G + IA L ++ Sbjct: 120 TGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISV 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT H+ V+ KLGVS+ A L+ A Sbjct: 180 KTAENHRGKVLDKLGVSNTAELVRYA 205 >UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex RepID=A2WHU0_9BURK Length = 204 Score = 133 bits (334), Expect = 6e-30, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 10/182 (5%) Query: 38 LHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDI 97 + T + + + R ++ ++ E +GLS L L +FP + +V+ I Sbjct: 2 IGTARNSTELIELLERSPCDVLMTDYAMPGGEYGDGLSMLALLRRRFPLLKIMVLT-AGI 60 Query: 98 EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR------ 151 ++ ++ + VL+K + + G + N + S Sbjct: 61 SPAIVSEIARIGIRSVLNKVDDIGHLITAIHTVFAGAAYYSPGAQNLAHAAASEYMPDTM 120 Query: 152 ---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 +L+ E E+LR G S+ +IA Q++R +TI A K M KLGV D L AA Sbjct: 121 SGTSLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFRAAY 180 Query: 209 IL 210 + Sbjct: 181 EM 182 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 16/204 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ M + GI+S+ + + +E+ A + + ++ + Sbjct: 26 VLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVP-DVILMDLNMP---D 81 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS-------KASTLEIF 123 GLS + + P R L+++ D + +LS + VL K + + Sbjct: 82 VGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVM 141 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 E +L + + L+ E+ IL +++G S ++A+ L +++T Sbjct: 142 RGEQYLCTGAAGSLSPQSQTSR-----EALTGREQTILLELAQGKSNKEVAQALDISVRT 196 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + H+ N+ KLG+SS AGL A Sbjct: 197 VETHRKNIKRKLGISSTAGLTRYA 220 >UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2 Tax=Flavobacterium RepID=A5FAW2_FLAJ1 Length = 219 Score = 132 bits (333), Expect = 7e-30, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 21/217 (9%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K + L + + G+ +L + + + + + + D + + ++ S Sbjct: 1 MTKIKIHLADDHQVLIDGLTNLLQTVSNFE-IVGSSLNGVTVYDDVIQDQADILVLDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +++G+ L E K + ++++ D ++I + G L+K E + Sbjct: 60 P---QKDGIEVLKEFNQKGLPCKVIILSSYDD-LKIIKEVMKLGAKGYLTKKCAGENMIE 115 Query: 126 ELFLSLNGV---------------RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170 + G Q +LN YI ++ LSP E EI+ + YS Sbjct: 116 AIEAVYEGQEYFSDAVREKIFSMFSQNNPKLNKNVYI-ENPILSPREIEIVTLICLEYSG 174 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +I+E+L ++ T+ H+ N+M KL + + GL++ A Sbjct: 175 KEISEKLFISVNTVETHRKNIMKKLNIKNTIGLVKYA 211 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 132 bits (333), Expect = 8e-30, Method: Composition-based stats. Identities = 44/217 (20%), Positives = 78/217 (35%), Gaps = 15/217 (6%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M + K ++ LI+ + G + + + V+ Sbjct: 14 MAETPASKLHIYLIDDHPVVREGFARALSDEPDMV-VVGQAGTAADALRETASCKPDVVL 72 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + R+G+ L L + P+ + LV++ D E R+ +L G L K S L Sbjct: 73 VDLNIP---DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGA-QGYLVKTSKL 128 Query: 121 EIFHQELFLSLNGVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSM 170 E + + G + R L+P ER++LR ++ G S Sbjct: 129 EEVIEGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVST 188 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + A +L + KT+ H+ + +KLG S L A Sbjct: 189 RETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIA 225 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 132 bits (332), Expect = 9e-30, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ + + +G + S + + ++ S Sbjct: 71 VLIADDHALVRDGLRHILQNASGYEVAGEAFDSATT-IALVRSTPAQVLVLDLSMPG--- 126 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 R G+ + ++ + P R LV+ + + + G L+K S + Sbjct: 127 RNGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGA-SGYLTKESASSELVGAVTKV 185 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++SL + LN LS E ++ R ++ G ++TQIA++L + K Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ +K ++ K+ + +A L+ A Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYA 270 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 132 bits (332), Expect = 9e-30, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 12/205 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + L++ + G L A + +E+ A ++ ++ S Sbjct: 16 TLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKA-RQLMPDVILMDVSMPGM- 73 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------ 123 G+ + + P LV+ D +A + L +L AS E+ Sbjct: 74 --NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131 Query: 124 -HQELFLSLNGVRQATDRLN-NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 E L R+ +R + +Q LSP E E+LR + G + +IA L + Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206 +T++ H N+ SKLGV S + Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLY 216 >UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C3_PSEFS Length = 211 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 8/203 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + IG + + + G + + + R ++ F+ +++ Sbjct: 4 VIIADDHPIVRIG-QKVVIEANGKCKVVGEADGPDQLLALVQRTPCDVLVTDFAMPGNQQ 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G L L + P +++ A L S +++K+++ + Sbjct: 63 ADGYGLLGLLHRQHPDLPVILVTMFANVATLRSS-FSHGARAIVAKSASARELPLAIKAV 121 Query: 131 LNGVRQATDRLNNQWY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G ++ L Q LS ERE++R ++ G +++QIA ++ R+I TI Sbjct: 122 CEGHTFVSECLRLQLEEAGVGDQQGMPQLSGKEREVVRMLASGMTVSQIAARVNRSISTI 181 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 K MS+L +S+D L A Sbjct: 182 SKQKSTAMSRLCISTDVDLFAYA 204 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 132 bits (331), Expect = 1e-29, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 16/213 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K V L++ M G + ++ E+ + ++ V+ + Sbjct: 7 VSKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALG-LLEQVRPDLVVTDLTL 65 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R GL + ++ FP T+ LV + D +L G + K + F Sbjct: 66 ---GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGA-RGYVMKDADGPTFLT 121 Query: 126 ELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 + L G R + RL + + LS E E+ R G + +IA Sbjct: 122 AVRTVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIA 181 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 QL + KT+ H+ ++ KLG S+ A ++ A Sbjct: 182 AQLNLSPKTVSVHRDHIKEKLGFSTSAEMIRQA 214 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 131 bits (330), Expect = 1e-29, Method: Composition-based stats. Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 24/220 (10%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + LI+ + GI+ + E+ + R VI + Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEAL-ALVERYKPDVVIMDINMP- 93 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G+ +L +P T+ ++++ D E+ ++ +L + +L + + Sbjct: 94 --HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVR 151 Query: 128 FLSLNGVRQ--------------------ATDRLNNQWYINQSRTLSPTEREILRFMSRG 167 ++ G NQ L+ E E+L+ ++ G Sbjct: 152 VVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADG 211 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 S IA+ L + KT++ H N++ KL V+ + A Sbjct: 212 KSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVA 251 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 15/207 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ + G + + A+ + V+ + Sbjct: 13 VLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVP-DVVVLDITMPEE-- 69 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 GL L P TR L+++ D + + G L K S E + Sbjct: 70 -SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRI-GTHGYLLKDSAGEELRAAIRAV 127 Query: 128 -----FLSLNGVRQAT--DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 F S VR+ T + ++ Q L+P ER++L ++RG + IA +L + Sbjct: 128 HAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGIS 187 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ AH+ ++M KL + S AGL A Sbjct: 188 RRTVEAHRESLMRKLQIHSVAGLTRFA 214 >UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8 Length = 217 Score = 131 bits (330), Expect = 2e-29, Method: Composition-based stats. Identities = 43/204 (21%), Positives = 90/204 (44%), Gaps = 12/204 (5%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM--RSER 70 L + +GI + G + TS S M + S ++ + + Sbjct: 2 LADDHPFVLLGIRATLIAHGGFT-IVGEATSPSSLVQLMEKASCDVLVTDLTMPDASGDA 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 +GL + + +P +V+ A ++ S+ + G+L+K+ +++ + Sbjct: 61 DDGLRLIRRIRSGWPEVHIVVLTSL-TNAAILRSIMSDGVIGMLNKSESMDELAAAIRAA 119 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++S + ++ + ++ R LSP + E++R RG S+++IA L R+++ Sbjct: 120 GAGRSYVSRSILQTLAEASGEPLGMSPMRHLSPRQSEVIRMFVRGKSISEIARDLGRDVR 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 T+ K + M+KLGVS+D GL Sbjct: 180 TVSRQKRDAMAKLGVSNDPGLFAF 203 >UniRef50_A9AIC6 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderia cepacia complex RepID=A9AIC6_BURM1 Length = 229 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 84/207 (40%), Gaps = 10/207 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 VA+ + + + LF+ + H + ++++R+ VI +S R + Sbjct: 20 TVAIADDHPVVVSLLVQLFQADPSF-HVEHCCNEGSALIESLARVPTDIVIVDYSMSRGD 78 Query: 70 R-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL-EIFHQEL 127 R +G + L +L P+ R++ + + + ++SK + E+ Sbjct: 79 RPVDGFALLRKLREVAPKAGRVLFTM-QRNPTVFAAAMRLGVAAIVSKEDEVAELLRACR 137 Query: 128 FLSLNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 ++ G + + + + L+ E +++R G+S+ IA+QL R++ Sbjct: 138 YIQDGGACYLSPTVRTIVDQAGTVLRDNAPPLTQKEIDVVRLFVSGHSLADIAKQLGRSV 197 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208 T+ K+ M KL ++ L+ A Sbjct: 198 STVSTQKYTAMRKLRADTNVHLIRYAY 224 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 5/198 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +ALI+ + GI +L + E+F D + R ++ + Sbjct: 8 IALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAF-DLLQRTPVDILLMD---VGLRD 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL +L ++P + L+++ D + + SL+ VL +A + EI ++ Sbjct: 64 INGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIA 123 Query: 131 LNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 G + D S L+P ERE+L +++G + +A L+ +++T+ H+ Sbjct: 124 AGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVETHRL 183 Query: 190 NVMSKLGVSSDAGLLEAA 207 ++ KL + A LL+ A Sbjct: 184 SIRRKLAIDKPADLLKHA 201 >UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HVN1_9SPHI Length = 208 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 11/202 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +AL + + + GIESL ++ + Y + + D++ ++ + Sbjct: 4 IALADDHKLFAKGIESLLDEY-DDLLITGIYPNGKELIDSLKMDLPDVILTDLNMP---V 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--ELF 128 +G L FP+ + +V++ D E + +L A E+ + E++ Sbjct: 60 LDGFGVLKSSKKAFPKIKVIVLSMYDDEKIYKKCMKEGADAFILKDADPDELVYTIHEVY 119 Query: 129 --LSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + ++ + N + + R LS E +I++ + G +IA+ L +++T Sbjct: 120 DGRHIANFQRVIQQANQSSFYDAFREKFKLSRREVQIIKLIKDGMQNKEIADDLSLSVQT 179 Query: 184 IRAHKFNVMSKLGVSSDAGLLE 205 I H+ N+ SKL VSS L+ Sbjct: 180 IETHRKNIHSKLHVSSRIELVN 201 >UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella RepID=A9IRH9_BORPD Length = 258 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 9/202 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +A+++ + ++G+ + R +H T+ E+ ++ + F R Sbjct: 49 IAILDDHPVITLGVAAYLRSQPDFD-IVHAETTSEALVRSLKHQPCDVAVVDFYLPRQP- 106 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ + L + P + + + G L K++++ + + + + Sbjct: 107 WDGMDFIRRLRRQHPHMAIITFSAGAPAETEYAAFRAGA-HGYLPKSASMPVLVEVIRAA 165 Query: 131 LNGVRQA------TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + R L+ + L+ E E+LR +++G S+TQ+A +L R+ KTI Sbjct: 166 HSRGRPGDFISYKNGTLHTAAPRHPDTRLTTAEIEVLRQIAQGLSVTQLAARLLRSKKTI 225 Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206 HK M KLG++ D L Sbjct: 226 STHKRRAMKKLGLADDLALALY 247 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 131 bits (329), Expect = 2e-29, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 16/208 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G++++ +E+ + A + V+ + Sbjct: 15 VLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLP-DVVVMDLTMPEM-- 71 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + ++ P R LV++ A ++ + G L K +E + Sbjct: 72 -NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGAT-GYLLKDCAVEELVGAIHTV 129 Query: 131 LNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQIAEQLKR 179 +G ++ + + ++ LS ERE+L+ ++ G S +IA Sbjct: 130 ASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGV 189 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +IKT+ + +VM KL + + A L + A Sbjct: 190 SIKTVAVQRMSVMKKLNLFNVADLTKYA 217 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 130 bits (328), Expect = 2e-29, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + M G+ + + + + Q+ + + ++ S Sbjct: 4 ILLADDHAMFRSGLRRIL-EAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQ-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 L+ L L + PR +V++ +I +L + + + E + Sbjct: 61 -NSLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVL 119 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 ++ + Q D L + LSP E EI ++ S+++IAE+L+ ++KT Sbjct: 120 AGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVKT 179 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + ++ ++ K+ + S+A L++ A Sbjct: 180 VSTYRGRILEKMALRSNAELMQYA 203 >UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes RepID=C3BGJ6_9BACI Length = 201 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 12/195 (6%) Query: 21 SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80 G++ L +K E+ + + +I S R +G+ LTE+ Sbjct: 2 RSGLKLLLQKRPSLKVVGEASDGLEALRLYDI-LRPDILILDISLP---RLDGIQVLTEI 57 Query: 81 AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQELFLSLNG 133 +++ + + +V+ + E + ++ V A E + L+L Sbjct: 58 KLRYEQAKVIVLTMHEDEDYVTLIMNAGASGYVPKAAVDEELYTAIDSVMDGYLYLRPKE 117 Query: 134 VRQATDRLNNQ-WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192 + RL N+ N LSP ERE+L+F+ +G+S+++IA++L +IKT+ HK ++ Sbjct: 118 ISTMLKRLQNETESRNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRML 177 Query: 193 SKLGVSSDAGLLEAA 207 +KL +S + L++ A Sbjct: 178 NKLNLSKKSELVQYA 192 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 21/212 (9%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G++ + G E D + +++ VI S Sbjct: 8 IFLVDDHAILREGLKMILS---GQFEICGESGDAEKALDQIGKLNPDLVITDISMPG--- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 G+ + L ++P R ++++ D + L VL + ++ Sbjct: 62 LSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVH 121 Query: 125 -QELFLSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 E +LS V NQ LS EREIL+ ++ G S I + Sbjct: 122 KGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGK 181 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L + T++ H+ N+M KL + A L+ A Sbjct: 182 ILGISPATVKVHRANIMKKLNLHKVADLVMYA 213 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 130 bits (328), Expect = 3e-29, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAA 58 HS V LI+ + G+ + Y + E+ + R Sbjct: 13 HSIDAPARVLLIDDHALVRDGMRMHLT-LQPDLYVVGEADGGEAALAWLERAGARERPDL 71 Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 VI G++ L ++P LV++ D ++ G + K + Sbjct: 72 VITDIGMRGMG---GIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGA-RGYVLKDA 127 Query: 119 TLEIFHQELFLSLNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + + L G R A L+ ER+IL + RG + +I Sbjct: 128 PADELMAAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEI 187 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 A QL +++T+ H+ N+ KLG+ AGL++ A Sbjct: 188 ATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYA 221 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 130 bits (327), Expect = 3e-29, Method: Composition-based stats. Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 15/205 (7%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + ++ + E+F S V+ S E Sbjct: 5 IADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRP-DIVLMDLSMPPGE--N 61 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 GL + FP T+ +++ D EA + +L G + K S+ E+ + + Sbjct: 62 GLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGA-QGYIMKNSSEELLLDAIRSVMG 120 Query: 133 GV-----------RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G +Q N LS E+EIL ++ GY +IAE+L + Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206 KT+ HK ++M KL + + LL Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRF 205 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 130 bits (327), Expect = 4e-29, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 85/209 (40%), Gaps = 15/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ L + + G+++L A E+ + + + ++ Sbjct: 3 SIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEA-VNLVESLQPGVLVTDLMM---G 58 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127 G+ ++ + P+T ++++ EA + +L VL +++ E+ Sbjct: 59 GMSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118 Query: 128 ---------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 LS + ++ ++ TL+ ERE+L +++G++ +IAE+L Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +T+ H+ N+M KL + + LL A Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYA 207 >UniRef50_B4STE5 Two component transcriptional regulator, LuxR family n=3 Tax=Stenotrophomonas RepID=B4STE5_STRM5 Length = 208 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 10/202 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + GI + + + + + + AV+ S Sbjct: 5 IIIADDHPVVLHGIRVVLQTHLMD--VVGSACDGAELLQLVDNNDCDAVLTDLSMPG-AG 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G + L + P +V+ L+ L + G++ K + Q L + Sbjct: 62 PDGPELIDALRARHPGLPVVVLTGARH-PGLLDGLLREGISGLVDKCADFTELPQALSAA 120 Query: 131 LNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 L G + +L + + + LS E+E+L ++ G S+ +AE+ R+ KTI Sbjct: 121 LAGQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLLAAGLSVNAVAERCGRSPKTI 180 Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206 K KLG+ ++ L + Sbjct: 181 SRQKAEAKRKLGLQNNQELFDY 202 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 130 bits (326), Expect = 4e-29, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V +++ + G+ L T++E+ + V+ S Sbjct: 4 SVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCP-DVVLLDLSLP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--EL 127 ++G + EL R L + + EA + +L KA+ E+ + Sbjct: 60 DKQGHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSV 118 Query: 128 FLSLNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKR 179 + V + +L +Y N + LS E+E+L+ ++ GY+ +IAE+L Sbjct: 119 YQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYI 178 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +IKT+ H + KLG++ + L+ A Sbjct: 179 SIKTVETHIARIKEKLGLNRRSELVRYA 206 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 129 bits (325), Expect = 5e-29, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 16/207 (7%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + G+ +L G +E+ + A + V+ + Sbjct: 2 VADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQE-LRPDVVVLDVTMPE---LN 57 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 GL E+ P T +++ D + L +L VL + + + LS + Sbjct: 58 GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKH 117 Query: 133 GVR---QATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 +A +R N ++ +L+ ERE+LR +++G S ++A QL + Sbjct: 118 APYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSIS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ H+ NVM KLG SS L+ A Sbjct: 178 AKTVETHRANVMRKLGASSIVDLVHYA 204 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 129 bits (325), Expect = 6e-29, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%) Query: 11 VALIEKCVMSSIGIESLF-RKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + + + G+ L RK P+ + + VI + Sbjct: 5 ILIADDHAIVREGLRVLLERKGLEVPWMAE---NGRQAVCLAVKFKPDIVIMDITMPNM- 60 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------ 123 G ++ PRTR + ++ + + + VL ++ E+F Sbjct: 61 --NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAV 118 Query: 124 -HQELFLSLNGVRQATDRLNN---QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + ++S + + D + +SP ERE+L+ ++ G QIAE+L Sbjct: 119 GRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFV 178 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +IKT+ AH+ N+M+KL +SS AGL A Sbjct: 179 SIKTVEAHRRNIMNKLMISSVAGLTRFA 206 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 129 bits (324), Expect = 8e-29, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 17/218 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K+ V +++ + G++SL + A E+ A + V S Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQE-LKPDLVTMDVSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-- 123 G+ + + P TR L+++ + + V+ + +T + Sbjct: 60 P---DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQG 116 Query: 124 -----HQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172 E F+ + +L +Q+ L+P E+++LR ++ G S Q Sbjct: 117 FDALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQ 176 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 IA ++ + KT+ H+ N+M KL V S L++ A L Sbjct: 177 IAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARL 214 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 128 bits (323), Expect = 9e-29, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 7/200 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 VA+ + + GIE+L R Y + ++ + + + R ++ S Sbjct: 22 TVAIADDHHVVRQGIEALLRMCPDMEY-VGGASTVDEARQLVHRTRPDVLVSDLSMPGG- 79 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ L L + P TR +V+ A + S ++K + + Sbjct: 80 --SGVGFLRNLRRECPDTRIVVLTMH-ATALAMQDAFDSGAHAFVAKDDAFDTLVSIIRR 136 Query: 130 SLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 +G R + ++ L+P ERE+L+ +++G S +I QL + KT+ + Sbjct: 137 VHSGEEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVEVY 196 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 + +M K V+ L+ A Sbjct: 197 RGRLMKKFNVTKGTELIHHA 216 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 128 bits (323), Expect = 1e-28, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K V L++ M G+ L E+ + V+ S Sbjct: 4 SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL- 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + G + + P LV++ D +L G + K E+ Sbjct: 63 --KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGA-RGYVMKQEPGEVLVTA 119 Query: 127 LFLSLNGVRQATDRLNNQWYINQS----------RTLSPTEREILRFMSRGYSMTQIAEQ 176 + L G + ++ + + +L+P+E E+L + G+S +IA+ Sbjct: 120 IHEVLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKL 179 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 L R+IKTI H+FN+ +KL + A L+ A Sbjct: 180 LSRSIKTIETHRFNIRTKLNLKDGADLIRYATHW 213 >UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria RepID=Q4KAJ3_PSEF5 Length = 217 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 10/210 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK VAL + + + L +K T Q VI + Sbjct: 1 MKKIRVALADDHPLVLAAVSDLLKKTRQYEVVAAVTTPSALVQQLSDDPRIDVVITDYFM 60 Query: 66 MRSER-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF- 123 +G+ +T L FPR + LV+ ++ +L + VL K + Sbjct: 61 EGDPTFGDGIRLVTYLIRHFPRVQVLVLTMMS-NPMIVAALYDIGVRSVLPKRHDMSELL 119 Query: 124 -------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + + V+ + + + +L+P E E+LR RG SM QIA Sbjct: 120 SALENVRQGRIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAAN 179 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 LKR++KT+ A K + + KL + SD L+ Sbjct: 180 LKRSVKTVSAQKISAIRKLNLDSDQALVAF 209 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 128 bits (322), Expect = 1e-28, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + V+ G+ + + + + A+ ++S ++ S R Sbjct: 5 VVLADDHVLMRQGVSQML-NANPDISVVGECDDGVALIAAVLKLSPDVILMDISMP---R 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL + ++ + + LV++ E I ++ + G + K S+ E + + Sbjct: 61 MSGLVAIDKILSQRSDAKILVLSMH-NEVEYIEAMRDAGAKGYILKESSGESLVEAIKKV 119 Query: 131 LNGVRQATDRLNN------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 D L Q +++ L+ ERE+ + G + +IAE L ++KT Sbjct: 120 AANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTA 179 Query: 185 RAHKFNVMSKLGVSSDAGLLEAAD 208 H+ N+ KL +SS A L+ A Sbjct: 180 ENHRSNIYKKLNLSSSAELIRMAG 203 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +K + L++ + G+ L + + E + + F + Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEA-ENAEQAISMIRQNEFDVALVDIGLP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL L ++ + PR L+++ E + +L G L+K S Sbjct: 63 GKG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGA-SGYLTKNSPPGTLLAA 118 Query: 127 LFLSLNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G R + L Q + + S LS E E+LR ++ G S+TQIAE L Sbjct: 119 IRKVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHL 178 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ ++ ++ K G+ S+A L A Sbjct: 179 SPKTVTTYRARIVEKTGLHSNAELTRYA 206 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 5/198 (2%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V +++ + GI SL R +++E+F+ + + + V+ S Sbjct: 5 SVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFE-LVKQHNPDIVVADLSMPG-- 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL + ++ TR +++ + + S VL K+ E + Sbjct: 62 -VTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVL-KSDAFEDLVDIIHR 119 Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 G T + + + TLSP E+++L +S G S +I+ +L + KT+ H+ Sbjct: 120 VHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETHRS 179 Query: 190 NVMSKLGVSSDAGLLEAA 207 +M KL V+ L+ A Sbjct: 180 RIMQKLNVTKATELVREA 197 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 128 bits (321), Expect = 2e-28, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 14/215 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK ++ + + + GI+SL + + T + + + V+ + Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFE-VVGEATDGDELIQFIDTLDPEIVVLDITM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124 ++ G+ +TE+ R + +V++ D ++ S+ L +L EI Sbjct: 61 P---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKA 117 Query: 125 ------QELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAE 175 + + S + + L N + S TL+ E E+L+ +S G S IA+ Sbjct: 118 VKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIAD 177 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +L +++T+ H+ N+M KL V + A L++ A L Sbjct: 178 KLFISVRTVETHRINLMKKLDVHNSAELIKKAMDL 212 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G+ +L + G +E+ + ++ V+ Sbjct: 21 VLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEA-IALVLSLNPDVVVMDLVMPG--- 76 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 G+ L + P LV+ + +A + +L VL A + + Sbjct: 77 VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 E R+ L L+ EREIL ++ G S +IA +L + KT Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 ++ H ++ +KL V+ + A Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRA 220 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 13/216 (6%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 R +K + +++ + G+ G+ S E ++ + A I S Sbjct: 10 RQEKTRIMMVDDHPLVREGMARFL-NLQGDLDLCCEAGSVEEALAVVADCNPALAIIDIS 68 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----- 119 GL + L ++P L I+ D +L ++ K +T Sbjct: 69 LNGE---SGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILL 125 Query: 120 --LEIFHQELFLSLNGVRQATDRL--NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + +++LS + + RL + LS E EIL + G+ Q+A+ Sbjct: 126 AVRRVLAGDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVAD 185 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 +L R+IKTI H+ ++ KL + S A L+ A L Sbjct: 186 KLNRSIKTIETHRASLKEKLQLKSGADLVRFAIQWL 221 >UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7 Tax=Burkholderia RepID=B2JCS9_BURP8 Length = 236 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 10/203 (4%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + + +E+L F S E F +A R+ V+ + Sbjct: 15 IADDHPLVLLAMENLMSGFPNIEIVGKATDSSELFAEA-QRVKCELVVMDLYMPGGLHGD 73 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH-------- 124 G+ + + + P +V+ + A + + + V+SK +++ H Sbjct: 74 GVEMVRQFKERHPDVVVVVLTM-ETSADALQKVIALGVGAVVSKRDRIDLIHVAIITALA 132 Query: 125 QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 +E ++ D ++ + LS E E+L + G +T+IA +L R++KTI Sbjct: 133 RECYVGPAIRALLADATLSRRIDYVRQVLSRRELEVLTHYATGRGVTEIAMRLGRSVKTI 192 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 A K M KL + SDA L A Sbjct: 193 SAQKCTAMRKLSLQSDADLFRFA 215 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 37/203 (18%), Positives = 85/203 (41%), Gaps = 10/203 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V +++ M G+++ + T ++ A+ + ++ S Sbjct: 10 SVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIE-LKPDVILMDISMP--- 65 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ + + P T+ L+++ + ++ + G L K +T E + + Sbjct: 66 TMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAV-GYLLKDTTSEEIYYAIKA 124 Query: 130 SLNGVRQATDRLNNQWYINQ-----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 NG + + N S L+ E+ +L ++++G + +IA+ L + +T+ Sbjct: 125 VANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 AH+ N+ +KLG+ S A L+ A Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYA 207 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 10/206 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + V + + + G+ + + + + ++ + Sbjct: 12 AQIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAH-HPHVLVLDLNMP 70 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + L + L + P T +V+ A +L VL +A+ E+ Q Sbjct: 71 GEQ---SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELV-QA 126 Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + L+ G L + + L+ E E+LR ++ G++ +IA+QL +I Sbjct: 127 VRLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSI 186 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ +H+ ++ K+ SS A L+ A Sbjct: 187 RTVESHRAHIQQKVRRSSRAELVRYA 212 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 127 bits (320), Expect = 2e-28, Method: Composition-based stats. Identities = 32/208 (15%), Positives = 79/208 (37%), Gaps = 15/208 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + G+ L G +++ A V+ + Sbjct: 6 ILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTP-DVVVMDVAMPG--- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ +++ K P T + ++ E+ ++ +L +L ++ ++ + +S Sbjct: 62 LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVS 121 Query: 131 LN-----------GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 V ++ + + L+ ERE+L+ ++ G + ++A L Sbjct: 122 EGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNL 181 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ T+ H+ N++ KL + S A L+ A Sbjct: 182 SLYTVETHRGNILQKLNLHSGAELILYA 209 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 127 bits (320), Expect = 3e-28, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 15/207 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + V+ G L ++ +G E+ + +M ++ V+ + R Sbjct: 9 VLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSM-KVHPDVVVMDIAMP---R 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-------ASTLEIF 123 G+ ++ P T L++ + E ++ L +L + ++ Sbjct: 65 LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVY 124 Query: 124 HQELFLSLNGVRQATDRLNNQ----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 E L + R+ D+L N+ ++ L+ E E+L+ +RG S IA+QL Sbjct: 125 AGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYL 184 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEA 206 + +TI+ H N+ KL V S + Sbjct: 185 SNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP Length = 226 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 13/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + GI +L AG + +++ + A + V+ + + Sbjct: 6 VLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQP-DLVLMDIAM---DD 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 +GL+ +A P + ++++ D +L +L A+ E + Sbjct: 62 MDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVM 121 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +++LS R + + ++ + L+P + EIL + G +IA +L ++ Sbjct: 122 RGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSV 181 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ AH+ +M +LGV A LL A Sbjct: 182 KTVEAHRAQIMERLGVRDIANLLLEA 207 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 14/214 (6%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M RIK + + + + GI ++ + A + + E+ + VI Sbjct: 1 MVDPRIK---IVIADDHPIVRSGIRAVLEQRAEW-WVCGEADNGETAVRLAREHAAKIVI 56 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 +S GL + P T L+ + E+ + +L +L Sbjct: 57 LDYSLP---VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDS 113 Query: 121 EI-------FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 E+ + + S + SR L+ ERE++RF+S G S +I Sbjct: 114 ELVAAVAALIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRI 173 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 A +L ++KT+ +H+ M KLG+ + L+ A Sbjct: 174 AARLGVSVKTVDSHRTTAMRKLGLRNAVDLVRYA 207 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 8/196 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 VALI+ ++ G L + +E+ R I S Sbjct: 3 TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR-GVQVCICDISMP--- 58 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL L++L P+ ++ L+ + G LSK + + + Sbjct: 59 DISGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114 Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 G T + + + L+ ER++ +++G ++ +IA +L + KT+ H+ Sbjct: 115 VATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174 Query: 190 NVMSKLGVSSDAGLLE 205 N+M KLGVS+D L Sbjct: 175 NLMEKLGVSNDVELAR 190 >UniRef50_A1BJU3 Two component transcriptional regulator, LuxR family n=1 Tax=Chlorobium phaeobacteroides DSM 266 RepID=A1BJU3_CHLPD Length = 203 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + + + G+ L +E+ + + + S Sbjct: 3 TIIIADDHKIFRQGLSRLLADDDRFKLLGEASNGKEALN-LIWKEKPQVAVLDLSMP--- 58 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 R +GL ++ + TR +++ D + +L VL +A+ EI + + Sbjct: 59 RPDGLEVVSSIRAAHSNTRCIILTMKDDIETVRRALESGVYGYVLKEAAYEEIAEAIVKV 118 Query: 130 SLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188 + N + + N Y + L+ E E+LR + RG + QIA +L + +T+ H+ Sbjct: 119 ADNKLYLGRFQDNPNLYASCCEGQLTNREVEVLRCVVRGLTSRQIASELFISHRTVETHR 178 Query: 189 FNVMSKLGVSSDAGLLEAA 207 ++M KL + + GL A Sbjct: 179 QHIMEKLNIRTATGLAGYA 197 >UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM Length = 210 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 6/200 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +AL++ + G + + ++ ++F + R I + R +R Sbjct: 14 LALLDDHEVVRRGTALHLSRDVRFR-IVASHGHSDAFIQDLRRTPVDVAIIDLALARGDR 72 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 + + + L FP L A IG L + + GV+SKA L + + + Sbjct: 73 -DCMELVGLLRAAFPAVPLLAFATLSPGIH-IGPLIDAGVRGVVSKAEPLPLLSEAIVRV 130 Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190 G+ + N S LS ERE+L + G ++++IA+Q R+IKT+ K Sbjct: 131 SLGLDRLPPDCRN---PADSEDLSRNEREVLHLLLAGLTVSEIAQQRHRSIKTVSTQKKA 187 Query: 191 VMSKLGVSSDAGLLEAADIL 210 + KLG+ +DA + L Sbjct: 188 ALRKLGLRNDAEIYAMRQQL 207 >UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12 Tax=Xanthomonadaceae RepID=Q3BU15_XANC5 Length = 221 Score = 127 bits (319), Expect = 3e-28, Method: Composition-based stats. Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G+ L + FAG + ++ + D S V+ S Sbjct: 14 VIIVDDHTLVRAGLSRLLQTFAGID-VVGEASNAQQALDMTSLHRPDLVLMDLSLPG--- 69 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 R GL +T++ PRT ++++ D + +L + V+ A+ LE+ Sbjct: 70 RSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELALRAAA 129 Query: 125 -QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 ++FLS + + + LSP +REILR + RG S +IA L ++KT Sbjct: 130 AGQVFLSPQISSKMIAPMLGREKPVGIAALSPRQREILREIGRGQSNKEIAADLGISVKT 189 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + H+ +M LG L+ A Sbjct: 190 VETHRARMMESLGCRRANDLVLLA 213 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 82/201 (40%), Gaps = 8/201 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + +++ + G+ + + + + + M + V+ S Sbjct: 3 IFIVDDHPIFREGLIARLSMDDDFV-IVGQAANGKEALEKMPNLMPDIVLMDISMPEM-- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ KFP + L+++ D + ++ L+ L S E+F+ + Sbjct: 60 -NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIH 118 Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G+ + + + +++ L+ E+ +LR ++ G + ++A +L +++TI Sbjct: 119 NGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIET 178 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 H+ N+ KL + + AGL+ A Sbjct: 179 HRRNIKDKLAIKTSAGLVRYA 199 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 16/218 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +R V L++ G+ ++ + ++ +AM R++ + S Sbjct: 21 AQRRVLLVDDHPAIRRGMAAIIDEEPDLT-TCGEASTAPMALEAMRRLNPDIAVIDISMP 79 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE----- 121 + G+ + + + P + L+++ D + +L G + K LE Sbjct: 80 GT---NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGA-KGYVMKGEALECVLTG 135 Query: 122 ---IFHQELFLSLNGVRQA---TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + E+++S + T + + LS E E+LR + RG+ +IAE Sbjct: 136 LRKVGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAE 195 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +L ++KT+ H+ ++ KLG ++ A + Sbjct: 196 ELSLSVKTVETHRAHIKEKLGFKEAGEMVRFAIDWVAQ 233 >UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms RepID=Q0K0R3_RALEH Length = 216 Score = 127 bits (318), Expect = 4e-28, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 10/206 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V + + + + +++ + +S + A+ ++ F+ RS Sbjct: 7 SVVIADDHPVIQLAVKATLSEIPNVR-ISAICSSGKELFAALQTQQPDLIVTDFTMERSH 65 Query: 70 -RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL + L P T +V L+ + + ++ K I Q Sbjct: 66 VNDDGLRLVHRLRQSRPHTPIVVFTML-TNGGLLTRIKEMGVAAIVGKNEEPGILRQICV 124 Query: 129 LSLNGVRQ-------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 ++ G Q A + LSP E E++R + G ++T+IA L R++ Sbjct: 125 DAITGTGQRLSPGIAARMSSAGALVNGTASPLSPREIEVVRMFATGSTLTEIAGYLHRSL 184 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 TI K + M KL ++++A L+ A Sbjct: 185 ATIATQKRSAMRKLNITTNADLVTYA 210 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 10/203 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ L + G + ++++Q + ++ S Sbjct: 7 IMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMP-DVIVMDMSMPGMG- 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL L + ++P+ R ++ + + A +L V + ++ ++ Sbjct: 65 --GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVA 122 Query: 131 LN------GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G+ Q + +R LS E E+ R ++ G + +I+ LK + KT+ Sbjct: 123 QGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTV 182 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 ++ + KLG++S L+ A Sbjct: 183 ANYQTLLKQKLGITSPIELVRLA 205 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 17/218 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + +++ + G++++ R+ + E+ + A + S Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKD-CRPDLAVLDISL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R G+ EL P L+++ + +L L + A+T + Sbjct: 60 P---DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSG 116 Query: 126 EL-----------FLSLNGVRQATDRLNN--QWYINQSRTLSPTEREILRFMSRGYSMTQ 172 LS+ R + + + +L+P ERE++R + G S + Sbjct: 117 LRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKE 176 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +A L+ ++KT H+ ++M KLG+ + L+ A L Sbjct: 177 VAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKL 214 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 126 bits (317), Expect = 4e-28, Method: Composition-based stats. Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 7/200 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V LI+ + G++++ F + T ++ D +I V+ + + Sbjct: 9 VLLIDNHPLVLDGLKAVLETF-DHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMP---K 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + +FP R ++++ D + S+ VL ST EI ++ Sbjct: 65 LSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVA 124 Query: 131 LNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G ++ D L + S L+P E +IL + G S +IAE L + T H Sbjct: 125 DGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETH 184 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 + N+ KLG+++ AGL+ A Sbjct: 185 RKNLKKKLGIATTAGLIRYA 204 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 14/213 (6%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K+ +A ++ M G++ L +Q++ Q + + + S Sbjct: 18 KKKIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQ-LEQGKPDMLAVDISLPG 76 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------L 120 R GL + + P LVI+ D L V+ A + Sbjct: 77 ---RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIR 133 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQL 177 + ++S Q + + + LS E E+ + +S G S QI + L Sbjct: 134 NVLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDAL 193 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 ++KT+ H+ ++ KL + A +L A Sbjct: 194 NISVKTVEVHRAHIREKLKLEDGASVLRYAVRW 226 >UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem domain,LuxR C-term domain n=1 Tax=Cupriavidus taiwanensis RepID=B3RBJ1_CUPTR Length = 223 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 9/205 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69 VAL + + + ++ A + ++R I F Sbjct: 16 VALADDHPLVMAALRDCLQRSA-RVQISAECRNGTELLGTLARHPADIAITDFCMGHGDA 74 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G + L+ LA P TR +VI+ A ++ + G +SK LE + Sbjct: 75 SLDGFNLLSRLARHHPATRVVVIS-ARANAAIVRRAMKLGVRGYVSKEDPLEEVVRACAH 133 Query: 130 SLNGVRQATD------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + G +R + E E++R ++G +T+IA +L R++ T Sbjct: 134 AAFGRGCFCSPAVQAALQRAALAGTPAREPTQRELEVIRLFAQGAQLTEIAAKLGRSVST 193 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAAD 208 + + K M KLGV ++ L+ A Sbjct: 194 VSSQKTVAMRKLGVQTNTALIRYAY 218 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + + +G+ +L T+ E+ + A + + + S Sbjct: 8 VLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELART-LQPDVAVLDISMPG--- 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL L +A TR L++ E L+ L G + K+S + + L Sbjct: 64 -NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGG-SGYVRKSSLHTDLVEAIRLV 121 Query: 131 LNG---VRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQLK 178 G + QA R Q Y++ +RT LS ERE+LR + GY+ +IA+QL Sbjct: 122 ARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLF 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ ++ VM KLG S + L+ A Sbjct: 182 LSPKTVETYRHRVMQKLGFSRRSELVRFA 210 >UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14 Tax=Lactobacillus RepID=A5VJY7_LACRD Length = 217 Score = 126 bits (317), Expect = 5e-28, Method: Composition-based stats. Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 15/209 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + + +++L + T ++ A + +I + E Sbjct: 4 VLVADNYPIIRMAVKNLVEQLDNFKVIAEEATGIDASLRA-EQGDIDIIIMDLAMPPGE- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 GL + + FP T+ ++ + + + ++ +L +S E+ H Sbjct: 62 -NGLITIKRIHEHFPNTKIIIFSSRNEPQYINQAIYNGANSYILKSSSPKELVHALRHAI 120 Query: 125 -QELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 E +L N + D L + + + LS E+EIL + GY+ +IA ++ Sbjct: 121 NGEKYLDNNIMVTKKDLLVIKGGSPHFDLGNYVALSKREQEILPLIVLGYTNKEIATKMF 180 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ AHK +M KL ++S A LL A Sbjct: 181 ISPKTVEAHKTKIMQKLNLASHAELLHYA 209 >UniRef50_A4W740 Two component transcriptional regulator, LuxR family n=73 Tax=Gammaproteobacteria RepID=A4W740_ENT38 Length = 210 Score = 126 bits (317), Expect = 6e-28, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 8/191 (4%) Query: 21 SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80 G L + Y S A+SR + + GLS L L Sbjct: 15 RSGFAQLLNLEEDLIVE-GQYGSAAEAWPALSRNDIDVAVMDVAMPDE---NGLSLLKRL 70 Query: 81 AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDR 140 + P R ++++ D A + +L + + E+ + + G D Sbjct: 71 RQQRPGFRAIILSIYDTPAFVQSALDAGASGYLTKRCGPEELVQAVRSVGMGGHYLCADA 130 Query: 141 LNNQWYINQ----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196 + L+P ERE+ + +G S+ IA L+ + KT+ H+ NV+ KL Sbjct: 131 VKALRGGQPVSKVLDVLTPREREVFDLLVKGESVKAIAFTLELSHKTVHVHRANVLGKLQ 190 Query: 197 VSSDAGLLEAA 207 SS L+ A Sbjct: 191 CSSTIELVHFA 201 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 8/200 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + E GI+ F + + + + + R +I R Sbjct: 4 LVIAEDHTALIDGIKVFFEYEEDIEF-VGFANNGQELIELTRRKKPNLIITDI---RMPV 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ E+ +FP + + + D + + + + + G + K S+L+ + Sbjct: 60 MDGIQATKEILEEFPNIKIIAFSMFDQD-KAVQQMLEAGASGYILKNSSLKELLYAIRKV 118 Query: 131 LNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G + + ++ L+ +REIL+ + +G + +IA+QL T+ H Sbjct: 119 HEGEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETH 178 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 + N++ KLG+ LL A Sbjct: 179 RKNMIRKLGLQGAGELLRYA 198 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 79/211 (37%), Gaps = 19/211 (9%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+E + R+ E+ A + V+ +R + Sbjct: 89 VLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLP-DVVLLD---VRMPK 144 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 R G+ + P + +++ D EA L ++ + G L K +++ + Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAM-GYLLKEISIDEVAAAIRAV 203 Query: 131 LNGVRQATDRLNNQWYIN--------------QSRTLSPTEREILRFMSRGYSMTQIAEQ 176 G + + ++ + L+ E E+LR +++G + IA+Q Sbjct: 204 HGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQ 263 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L + T++ H N++ KL + S + A Sbjct: 264 LFISENTVKNHVRNILEKLQLHSRMEAVVYA 294 >UniRef50_B3E9L1 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9L1_GEOLS Length = 223 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 19/218 (8%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYT---SQESFQDAMSRISFAAV 59 +S+ + + +I+ M + S+ + P T S + +D ++ F + Sbjct: 6 NSKKTMKTILIIDDHTMFRQALRSMLMERM--PAGTITCDDAGSAAAARDKLAHQDFDLI 63 Query: 60 IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 + + + G+ L EL +P L+++ E + +L G L+K Sbjct: 64 VLDIGMLHT---NGMELLPELKSCYPALPVLMLSMYPEEQFALQTLKLGA-SGYLTKQEA 119 Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYS 169 + + L G R + ++ LS E EI R ++RGY Sbjct: 120 ADELLTAIEKCLAGERYLSSSFSSLLISQVLQHCKAEELPHTRLSRREMEIFRLLARGYM 179 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +IA L +IKT+ +K + +K+G +A L+ A Sbjct: 180 LKRIANDLGLSIKTVSTYKVRLSAKMGFKDNAALIRYA 217 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 5/197 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + VM G+ +L + + + + + + + Sbjct: 4 VLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALE-LIRSLEPDIAVLDITMP---K 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+S + TR +++ D ++S +L + E+ ++ Sbjct: 60 LDGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVA 119 Query: 131 LNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189 G + + L+ EREIL ++ G + IA+ L +IKT+ H+ Sbjct: 120 AGGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRT 179 Query: 190 NVMSKLGVSSDAGLLEA 206 N+M KL + S A L+ Sbjct: 180 NLMGKLNLHSTAELVRY 196 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 126 bits (316), Expect = 6e-28, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 79/214 (36%), Gaps = 16/214 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 S K + L++ M G+ + + ++ + + V+ Sbjct: 8 SPAKATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALE-LVKSEKPDLVLADI 66 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 + + GL L +L + P+ LVI+ D L G + K + Sbjct: 67 TLP---DKNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGG-RGYIMKHEGGKKI 122 Query: 124 HQELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172 Q + L+G +++++ Q + L+ E E+ R + G S + Sbjct: 123 MQAIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKE 182 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 IA + + KT+ H+ N+ +KLG+ + A L+ Sbjct: 183 IAANMHVSAKTVEVHRMNIKTKLGLKTAAELIRY 216 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 15/206 (7%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 +++ + G+ +F G ++ A V+ Sbjct: 16 IVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGP-DVVLMDLRMPTMG--- 71 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+ + L ++ P R LV+ D E+ ++ ++ G L K + E + + + Sbjct: 72 GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGAT-GYLLKDAPREDLIRAVRAAAA 130 Query: 133 GVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G + + L+ E E+LR ++ G + + A +L + Sbjct: 131 GQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEA 190 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAAD 208 T++ H + +K GV A + A Sbjct: 191 TVKTHLLHAYAKFGVRDRAAAVAEAY 216 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 82/219 (37%), Gaps = 23/219 (10%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIF 61 R+ K V +++ M +G+++ + G +E+ + + ++ Sbjct: 9 RMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILM 68 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 G E+ +FP + +++ + ++ ++ + VL S Sbjct: 69 DLMMPGM---NGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSA-- 123 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTL------------SPTEREILRFMSRGYS 169 +EL +L G + + + +R L + E+E+L ++ G S Sbjct: 124 ---EELIYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKS 180 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 IAE+L +IKT++ H N++ K + L A Sbjct: 181 NKDIAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAH 219 >UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZJS0_9SPHI Length = 223 Score = 126 bits (316), Expect = 7e-28, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 91/216 (42%), Gaps = 19/216 (8%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD-AMSRISFAAVIFSFSAMRS 68 +A+ + + G+ + + A L Q+ A + ++ + Sbjct: 5 TIAIADDQQLFREGLTFIIHQHADLKIALEAEHGQDLLNQLAQADKLPEVILMDIKMPQM 64 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ C L ++P+ + + + D E ++ L ++G L K ++ + + + Sbjct: 65 ---DGMECAKILKQRYPKIKIITLTVYDQEDYVL-HLLDLGVNGYLRKLTSGQDVCKAIR 120 Query: 129 LSLNGVRQATD--------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 D +++++ ++ ++P ERE+L + + Y+ +IA Sbjct: 121 TVCEKGYYFDDFVTQIMLSGLKRKRQISSKPKVDDDVHMTPREREVLALILKEYTTQEIA 180 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +QL +I+T+ H+ N+++K GV + GL+ A + Sbjct: 181 DQLFVSIRTVETHRKNLLTKFGVKNVVGLVVKALQM 216 >UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC Length = 223 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 8/203 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV + + + S G+ ++ + ++ + + +I +S + Sbjct: 15 NVVVADDHPVVSTGVAAILTAEMD-INVVGVASTISELLLLLQQQPCDVLICDYSFSGDQ 73 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 + +G++ L P +V+ A L+ + + + G L K+S + Sbjct: 74 QPDGVALFKRLRRNHPHVAIVVLTAHQDIALLVSRVMNTGVAGFLRKSSQDFARLAAIVR 133 Query: 130 SLNGVRQATDRLN-------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++ + D Q +LS E EI R + RG S+T+IA R+IK Sbjct: 134 RVHAGQTFVDPAVAVDLLEVGQAAQTSIESLSERELEIFRMLGRGMSVTEIAMHTNRSIK 193 Query: 183 TIRAHKFNVMSKLGVSSDAGLLE 205 TI K M KLG S+A L Sbjct: 194 TISHQKMRAMHKLGARSEADLYR 216 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 125 bits (315), Expect = 9e-28, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 14/207 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + M GI + G E + +S VI S + Sbjct: 6 VVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIE-LLNLLSTQPADLVILDISMP---K 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 G+ ++ +P + L ++ L + S +L + + EI Sbjct: 62 MSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTIL 121 Query: 125 -QELFLSLNGVRQATDRLN---NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + FLS + D L TLSP E E+L ++ G S +IA+ L + Sbjct: 122 EGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCIS 181 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ H+ ++M +L + + A L++ A Sbjct: 182 TRTVEHHRASIMKRLDLRTLADLIKYA 208 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 125 bits (315), Expect = 9e-28, Method: Composition-based stats. Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 12/205 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + M + ++ K G + ++ + D +S Sbjct: 5 IVLADDHQMFRHALRAMLEKEPGIR-IVGEASNGDELIDLISHQPVDIACVDIGMPGM-- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ L P R + ++ ++ L+ V + E+ + Sbjct: 62 -NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQ 120 Query: 131 LNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + D L+N + ++ ER++L+ ++ GY+ T+IA++L Sbjct: 121 QSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPS 180 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ H+ N+M KL + S A L + A Sbjct: 181 TVEVHRRNIMRKLDLHSVAELTKYA 205 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G++ + E D + + ++ + Sbjct: 4 ILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEV-VDKLRTCAVDLLLLDMTMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + + + P LV++ D +L G L+K S ++ + Sbjct: 60 ISGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGAT-GYLTKDSDPDVLLAAIRKL 118 Query: 131 LNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 +G R +L ++ + LS E ++L+ ++ G S+ +IA+ + KT Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 I HK +M KLG++++A ++ A Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYA 202 >UniRef50_C5A924 Two component transcriptional regulator, LuxR family protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5A924_BURGB Length = 218 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 6/201 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE- 69 VAL + + + + L + +H S + +I S S+ Sbjct: 13 VALADDHPLVASAMTKLLGETPS-ITVVHVSHSGAELLQQLRADPCEMIITDLSMGTSDH 71 Query: 70 -RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL- 127 ++GL ++ L +P R +V + L L V+ K +LE + Sbjct: 72 ADQDGLKLVSALRKNWPSARVIVYTALNH-PALAQRLLYLGAHAVVCKEDSLEELLAAVD 130 Query: 128 FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 +++ G + +L + L+P E E+LR + G S+ I+ ++ + T+ H Sbjct: 131 QVAVQGSTYLSKQLRGT-APAPASALTPRELEVLRHIGCGLSVVDISRRMFVTVSTVSTH 189 Query: 188 KFNVMSKLGVSSDAGLLEAAD 208 K N M KL + S L++ Sbjct: 190 KRNAMDKLNIRSTVELIQYIH 210 >UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC 29098 RepID=B6WQV4_9DELT Length = 222 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 21/216 (9%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + GI SL + +E+ A + +S VI S Sbjct: 7 ILLVDDHKLLMEGIRSLLAPHSHLRVAGMAPDGKEAVGLA-ATLSPDLVIMDISMPGM-- 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123 G+ + P TR L+ + + L+ L + G + K+ + Sbjct: 64 -NGVEASRAILQIRPETRILIYTGHEDQRHLLE-LIQLGIMGHVCKSDPPSVLLQAIDAV 121 Query: 124 -HQELFLS--------LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 E+FLS +RQ RL+ LSP E+EI R ++ GYS+ QI Sbjct: 122 RQGEVFLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIG 181 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 + L + KT+ HK++V++KL SS L + A L Sbjct: 182 DALNISPKTVETHKYSVLTKLRASSINELTKMAIRL 217 >UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16 RepID=Q0K3Q8_RALEH Length = 219 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 7/199 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 VAL + + G++ + GN + R+ ++ Sbjct: 10 VALADDHAIVLEGLKQVLSGV-GNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPG--- 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +GL+ + L + P R LV+ A + + + +G L K+ + L Sbjct: 66 VDGLAFVERLRTRHPALRILVLT-GSAGAGMAHAAIDAGANGYLVKSGDISELVPALMAL 124 Query: 131 LNG--VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188 G A + TL+ E +IL ++RG + IA QL + T R H+ Sbjct: 125 REGRNFVAARATAPATAAPDGIATLTRRELQILMLIARGATAGDIAAQLDISPLTARKHR 184 Query: 189 FNVMSKLGVSSDAGLLEAA 207 N+M KL + + A ++ A Sbjct: 185 ENLMRKLDLHNTAEVVAYA 203 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 8/206 (3%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + V +++ + G + ++ + S E ++R+ V+ Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVD-VVGDAASGEDALAMVNRLHPRVVLMDI- 59 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 R G+ + + P TR L++ D E + G+ G LSK + Sbjct: 60 --RLPGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGA-FDVGAAGYLSKTAPGRELV 116 Query: 125 QELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + G L + + TL+ ER +LR ++ G QIA +L + Sbjct: 117 EAVRAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ H + KLGV+S + A Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRA 202 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 89/211 (42%), Gaps = 15/211 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V + + + G++++ + +G L + E R++ + S Sbjct: 6 TVVIADDHALVREGLKTILKSQSGIS-VLGMAENGEEAVRLCRRLNPDVALMDLSMP--- 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122 + G+ + EL+ + +T+ L + + +L VL +S+ E + Sbjct: 62 IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETV 120 Query: 123 FHQELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +++L+ + + + + + +L+ ERE+L+ + GY +IA+ L Sbjct: 121 MQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVI 180 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 ++KT+ H+ N M KLG+ S A L ++ L Sbjct: 181 SVKTVEKHRSNFMKKLGLRSKAELKAYSEEL 211 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 14/207 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + GI L +F +++ + A + ++ V+ + Sbjct: 4 VMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELA-ADLAPHVVLMDMTMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 G+ L P R L+++ + + + +L ++ E+ Sbjct: 60 LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVA 119 Query: 125 -QELFLSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 E+++ + + L+P ERE+L+ ++ G + A QL N Sbjct: 120 CGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNIN 179 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +KT+ H+ +M KL + S A L + A Sbjct: 180 VKTVDTHRQQIMKKLKMRSVAELTKYA 206 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + +++ + G+ + +E+ D + ++ S Sbjct: 33 IGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREA-IDLVRVHEIDVLVMDLSMPGQ-- 89 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 GL L L K P L+++ E I +L G L+K + + + Sbjct: 90 -SGLDALAMLRAKAPDMGILILSGYPEEHYAI-NLIRQGASGYLNKECEPKEIVEAIRTI 147 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 +L+ + +LN + LS E ++ +++G + IA+ L ++K Sbjct: 148 ALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVK 207 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ ++ +M K+G+SS++ L A Sbjct: 208 TVSTYRTRLMEKMGLSSNSDLTYYA 232 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 125 bits (313), Expect = 1e-27, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 16/211 (7%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G+ L G + + + + V+ S Sbjct: 21 VLIVDDHAILREGLIQLINSTPGLS-VCGAAKNAHEGFELIEKTMPDVVLVDISLPG--- 76 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 + GL + ++ +P LV++ + L G L K + + Sbjct: 77 KSGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGA-RGYLMKNEGGQKLIAAIQKV 135 Query: 131 LNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 L G ++R+ N+ I+ LS E E+ + + +GY QIAEQL Sbjct: 136 LAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSL 195 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 ++KT+ A++ ++ KL + S L+ A Sbjct: 196 SVKTVEAYRASIKQKLYLKSGPQLVHYAISW 226 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 78/209 (37%), Gaps = 10/209 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFSFSAMR 67 V LI+ + G+ G + + + + VI Sbjct: 117 VLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMRG 176 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G++ L ++P L+++ D + ++ G + K + + + Sbjct: 177 MG---GIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGA-RGYVLKDAPADELLAAI 232 Query: 128 FLSLNGVRQATDRLNNQWY---INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 L G + R+ ++ L+P ER+IL + RG + IA QL +++T+ Sbjct: 233 QAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRTV 292 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213 H+ N+ KLG+ A L++ A L + Sbjct: 293 ETHRLNLKRKLGIEGRAELVKYAVQQLGL 321 >UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC Length = 212 Score = 125 bits (313), Expect = 2e-27, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 81/204 (39%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ M + L G S E+ + + V+ Sbjct: 4 VMLVDDHTMVRKALAHLIGSEQGIGVTSEA-DSGEAALALLKTETVDVVLCDIHMPGMG- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL + + ++P + + + +A L S+ + + G ++K + + + + Sbjct: 62 --GLEAIRRIQARYPEIGLIAVT-AEADAALARSVLEAGVHGYVTKDAPPQELITAIENA 118 Query: 131 LNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + +R + R+ + + + TLS E+++L + G S I++ L + KT Sbjct: 119 RHKIRFISSRIAQEIALQSMRKTADPFETLSGREQQVLMMILEGKSNQFISDALCVSPKT 178 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + +K + KLGV++D LL A Sbjct: 179 VSTYKVRLQEKLGVNNDIELLRLA 202 >UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR family n=4 Tax=Cupriavidus RepID=Q1LGB9_RALME Length = 300 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 12/206 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + + I + + TS Q + + V+ + Sbjct: 84 ILLADDHPVITAAIRARVQSSQTGWEVCGEATSATELQQQVDLLQPDVVVTDYHMPGPTE 143 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ +T L + P +V+ ++ ++ + G+L K S L + + Sbjct: 144 LDGVRLITSLRRRHPSISVVVLTMI-TNPLVLRTILDVRVHGLLIKDSPLAEIMTAIGRA 202 Query: 131 LNGVRQATDRLNNQWYINQSRTL-----------SPTEREILRFMSRGYSMTQIAEQLKR 179 G + RT+ S E E+LR G ++T+IA L R Sbjct: 203 QRGFTYIGKSALRALAPTELRTMLPCGRDGEQRPSAREMEVLRLYLTGRTVTEIATTLCR 262 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLE 205 ++KTI K M KLGV++D L E Sbjct: 263 SVKTISRQKNCAMQKLGVTNDRELFE 288 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 17/215 (7%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 R K V L + + G+ S QE+ + +S V+ Sbjct: 15 RKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSK-VRELSPEIVLMDLD 73 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 GL + +FP + L+++ + ++ + S G + K + L Sbjct: 74 MP---TMSGLEATKIIRREFPLVKVLILSIHTNKDYVL-QIIKSGAQGYVLKDAPLTELV 129 Query: 125 QELFLSLNGVRQATDRLN------------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172 + + G + ++ N S+ L+ E E+L ++ G S + Sbjct: 130 RAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKE 189 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +A ++ ++T+ H+ VM+KL + + AGL + A Sbjct: 190 MASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYA 224 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 18/210 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V ++E + G+ +L G E+ + ++ +R R Sbjct: 7 VMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLV----DVRMPR 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ + L + P +++ D + + L G + K + E + Sbjct: 63 MDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGA-RGYILKDTPSEELAAAIEKV 121 Query: 131 LNG-----------VRQATDRLNNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQL 177 G V RL+ Q + LS E E+LR ++ G S +IA L Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 T++ H +++ KLG A Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYA 211 >UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2 Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME Length = 215 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + I + S + + +S +A++ VI FS +E Sbjct: 7 VLVCDDHPIIVIALRSELARIGQFSEVVTA-SSVNEILNALNDPEVGIVITDFSL--NEA 63 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------I 122 +GL + + P +V + + + + + +SK + Sbjct: 64 GDGLQLIGRIKRMRPDVAVIVFSMN-ASPPAVRDMIAAGASAFVSKTCGTRDVAEACRVV 122 Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 F++ + D+ + + LSP ERE+LR +++G S+ +IA + R+ K Sbjct: 123 LAGRKFVAPASLAHLLDQDDGGTPQAALQRLSPREREVLRLLAQGLSLREIAARFNRSRK 182 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 TI K M+KLG++ D L Sbjct: 183 TISVQKCAAMAKLGLTHDMELGRY 206 >UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS Length = 214 Score = 124 bits (312), Expect = 2e-27, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 14/211 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYT--SQESFQDAMSRISFAAVIFSFSAM 66 + + L++ M G+ S+ + L S E + + + V+ + Sbjct: 2 KRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--- 123 GL L+ + +P L+++ E + SL + K + E+ Sbjct: 62 ELG---GLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAV 118 Query: 124 ----HQELFLSLNGVRQATDRL--NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + +LS + ++ + TLS E +ILR ++ G S+ IA L Sbjct: 119 GQLLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDL 178 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 + +IKT+ +K + +KLG +D L+ A+ Sbjct: 179 ELSIKTVSTYKARLFAKLGFHNDVDLIAYAN 209 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 124 bits (311), Expect = 2e-27, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 11/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + VM G+ +L + + + + V+ S Sbjct: 5 IILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMP-DVVVLDLSMPGM-- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 G + + K P ++++ +I +L +L + + E+ Sbjct: 62 -NGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCVF 120 Query: 128 ----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 +LS L ++ +L+P E + R + G + +I +LK + KT Sbjct: 121 KDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSKT 180 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + ++ VM KL +S+ A L+ A Sbjct: 181 VETYRLKVMKKLNISNIAQLVNHA 204 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 13/207 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD-AMSRISFAAVIFSFSAMRSE 69 + L + + GI+S+ + N + + + D A+ + + + Sbjct: 4 ILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP--- 60 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G++ + +L P + +V++ D A + + V+ +S EI + Sbjct: 61 ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120 Query: 130 SLNGVRQATD---------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 S + L+P E++IL+ ++ G+S +IA++ + Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLS 180 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + T+ H+ N+M KL + A L+ A Sbjct: 181 LNTVHVHRNNIMRKLDIHKQAELVRYA 207 >UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9 Tax=Actinobacteria (class) RepID=D2Q428_9ACTO Length = 213 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 19/215 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + +R V +++ M G+ S + +S A+ V+ Sbjct: 1 MSQRRVVVVDDHDMFRAGVRSEIGASVD---IVGEGADVDSAVKAIVAAEPDVVLLDVHL 57 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G + ++ + P + L ++ D +IG + G ++K + Sbjct: 58 PGGG---GTEVMKQVHQRHPEVKFLALSVSDAAEDVIGVIRAGA-RGYVTKNISGTELVD 113 Query: 126 ELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + +G + RL LS ERE+LR ++RGY+ ++ Sbjct: 114 AIGRVADGDAVFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEV 173 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 A +L ++KT+ H +V+ KL +S+ L A Sbjct: 174 ARELFISVKTVETHVSSVLRKLQLSNRHELTRWAT 208 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 124 bits (311), Expect = 3e-27, Method: Composition-based stats. Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 16/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRK---FAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +V L++ + +GI L + G ++ +E+ +A R+ V+ + Sbjct: 3 DVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEA-KRLKPDVVLMDINMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL + P + LV+ D E + + + G L+K +E Sbjct: 62 GIG---GLVATRRIVEAQPSVKVLVLTAMD-EGPVPRWVLEAGASGYLTKGCRIEEMIAA 117 Query: 127 LFLSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + ++ G R + + + + N LS ER+IL + +G + IA L Sbjct: 118 IQGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALN 177 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ +K VM KLG+S+D L+ A Sbjct: 178 ISPKTVSTYKCRVMGKLGISNDMQLVTLA 206 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 83/204 (40%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G+ L + + ++++Q IS ++ S Sbjct: 7 VMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPE-ISPDVLVMDMSMPGMG- 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL + + ++ + ++ + + I SL+ + G ++K+ E + + Sbjct: 65 --GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAM-GYVAKSGHAEDLVKAVREV 121 Query: 131 LNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 +G + + ++ + N ++ L+ E E+ R ++ G + IA +L KT Sbjct: 122 KSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKT 181 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + ++ ++ KLG+ S L+ A Sbjct: 182 VANYQTSLKQKLGIHSPVDLVRLA 205 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 123 bits (310), Expect = 3e-27, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 86/201 (42%), Gaps = 9/201 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G+ + Q++ + ++++ V+ + + Sbjct: 4 VLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALE-ILNKMPVDLVLTDINMPQM-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G+ L + + + ++++ D + ++ ++ DG + K + + + Sbjct: 61 -DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGA-DGYILKDVPGKELIEAIKKV 118 Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G R + L+ + + ++ E+ +LR +S G + +IA+++ +++T+ Sbjct: 119 AAGKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVET 178 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 HK N+ KL + S AGL+ A Sbjct: 179 HKRNIKQKLMIDSTAGLVRYA 199 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 79/210 (37%), Gaps = 13/210 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF-QDAMSRISFAAVIFSFSA 65 +K V + + M G+E+L + Y +F ++++ + Sbjct: 5 EKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDM 64 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +GL ++ ++P + L++ + E+ + ++ +L E+ + Sbjct: 65 PVQ---DGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNA 121 Query: 126 ELFLSLNGVRQATD---------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + + + + + N L+ E+E+L + +G + +I++Q Sbjct: 122 IRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQ 181 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 L T+ H+ N++ KL V + L+ Sbjct: 182 LFIADTTVETHRRNLIDKLEVKNSKELILY 211 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 123 bits (310), Expect = 4e-27, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 76/217 (35%), Gaps = 24/217 (11%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 N+ +++ + GI + E+ + A +S ++ S Sbjct: 5 NILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADE-LSPDVILVDLSLPGM- 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL L + P+ +++ + +L ++ +K E + Sbjct: 63 --NGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGA-SAYCTKDIEPEQLIDVITR 119 Query: 130 SLNGVRQATDRLNNQWYINQS-------------------RTLSPTEREILRFMSRGYSM 170 G + + ++ ++ L+P E EIL ++RGYS Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +IA+ L + +T++ H +++ KL V+ + A Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 10/202 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G+ L + + + ++ + S Sbjct: 4 IIMADDHTIFRQGLAHLLSAHQELE-IVGEAGRGDDALQLIRDLNPDVALLDISMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL + + + TR L++ D I + L V+ K + + Sbjct: 60 LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVV-KDNAFSELLDAILAV 118 Query: 131 LNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G R ++ + + + LSP E+E++R ++ G + +IA L + KT+ Sbjct: 119 AAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVD 178 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 H+ +M KL + + A ++ A Sbjct: 179 THRTRLMRKLNLHTTADVVRYA 200 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G++ E A+ + ++ S Sbjct: 4 VLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVL-AAIKTCNAHVLLLDMSMPG--- 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + + ++P LV++ E +L + S G ++K EI + Sbjct: 60 LSGVDLVRRVKSEWPGLPILVLSMY-GETQLAAKVLQSGASGYVTKGKGREILLSAIRKV 118 Query: 131 LNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 +G R L + + L+ E +ILR + G S+TQIA +L + KT Sbjct: 119 ASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + HK M KL ++ LL+ A Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYA 202 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 32/206 (15%), Positives = 84/206 (40%), Gaps = 14/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +A+ + + G+ + + E+ + + ++ + Sbjct: 4 IAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAP-DVLLLDITMP---V 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 ++G+ ++ T+ L+++ E + +L +G +SK + LE + + Sbjct: 60 KDGIEATADILALNVNTKILILSMHADEQYALRTLRAGA-NGFISKGARLEELLKAITDV 118 Query: 131 LNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G R D++ + R TLS E +++ +++G + +IA L+ ++ Sbjct: 119 HEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISV 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ H+ +V+ KL + +++ + A Sbjct: 179 KTVDTHRSHVLKKLELRNNSDITRFA 204 >UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DX27_9FLAO Length = 213 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 15/211 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK + + + + S GI + Y +H TS + + I S Sbjct: 1 MKKIQLLICDDHNLVSEGIAVMLESENN--YNIHIVTSGKQAIQHLHNHEVHVFILDISM 58 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +GL L L + L++ D + ++ G + K+++ + + Sbjct: 59 PEM---DGLVVLDTLKEEKLSQNVLMLTMHDQAKYIKKAIEKGA-KGYVLKSTSKTMLVE 114 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQ 176 + NG RL + L+P E +IL+ +++ +IAE Sbjct: 115 AIQKVYNGENFYDPRLTEILLNTSEESKNKQATHVKLTPREIDILKLIAQNKKTKEIAEL 174 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 L ++ T+++HK N+ SKL + S + L+ A Sbjct: 175 LFISVNTVQSHKKNLYSKLNIHSVSELVTYA 205 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 14/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ L + G + ++ Q A + + V+ Sbjct: 12 VLITDDHPVFRQGLRGLL-EALGVEVVGEAESGPQAVQLA-AELQPDVVVMDLHMPGG-- 67 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124 G+ + PR LV+ + + ++ +L ++ EI Sbjct: 68 -NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVA 126 Query: 125 -QELFLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 E R+ + Q+ L+ ERE+L+ +++G S +IA+ L + Sbjct: 127 AGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+R H N+ KL V+ A + A Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLA 212 >UniRef50_A0NVX8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NVX8_9RHOB Length = 217 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 10/206 (4%) Query: 8 KRNVALI-EKCVMSSIGIESLFRK-FAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFS 62 +R A+I + + G+ K P ++ A++ + ++ Sbjct: 4 QRYSAIIADDHAIVRSGLRDALEKPGLIEPEGINVLAEAGDGLSAIAEVRRHRPDLLLLD 63 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 S + G+ L E TR +V+ LI L + +DG+ SKAS Sbjct: 64 VSMPLAG---GVEVLIEARRWSKETRVVVLTGIS-AVGLISDLIETGVDGLFSKASDNAE 119 Query: 123 FHQELFLSLNGVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 F+Q+L L G R +D L L+ ER+ L + G S +IAE L +I Sbjct: 120 FYQKLPGILRGQRHISDVFLKILEETPAPPVLTDRERQTLNLILAGRSNKEIAEGLGISI 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ H+ ++M KL V S L+ A Sbjct: 180 KTVDKHRTSLMQKLNVHSVPQLMAKA 205 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 123 bits (309), Expect = 4e-27, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 14/204 (6%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + IG++ + E+ + + + +F A++ + R Sbjct: 6 IADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVE-LRKGTFDALVLDLTMPG---RN 61 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+ + ++ +FP+ L+++ + + SL G L K S + + + Sbjct: 62 GIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGA-SGYLCKDSAETLLADAIRKVAD 120 Query: 133 G---------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G + L+ + L+ E +I + +G +T+I QL ++KT Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + HK ++++K+ + + A L+ A Sbjct: 181 VSTHKASILAKMNLRNSAELVRYA 204 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 12/203 (5%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + GI+ + + + E + ++F ++ S Sbjct: 6 IADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG---VT 62 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+S +T++ ++P L+ + EA++ + G ++K S EI + + Sbjct: 63 GMSLITQIKAQYPAFPILIFSMH-NEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVAA 121 Query: 133 GVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G L Q + LS E EI + G + IA L + KT+ Sbjct: 122 GRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKTV 181 Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207 HK N+++K+ + S A L+ A Sbjct: 182 STHKLNLITKMKLHSTADLVHYA 204 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 123 bits (309), Expect = 5e-27, Method: Composition-based stats. Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 12/218 (5%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K V L++ M G+ + + E+ S V+ + Sbjct: 4 NKIKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL- 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-------AST 119 + G + + P L ++ D +L V+ + A+ Sbjct: 63 --KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAI 120 Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQL 177 E+ ++LS + R+ + + TL+P+E E+L + +G+S +IA+ L Sbjct: 121 HEVLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLL 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 R+IKTI H+FN+ KL + A L+ A + Sbjct: 181 CRSIKTIETHRFNIRVKLHLKDGADLIRYATRWISEEP 218 >UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR family n=1 Tax=Cupriavidus metallidurans CH34 RepID=Q1LLE4_RALME Length = 213 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 40/208 (19%), Positives = 88/208 (42%), Gaps = 15/208 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ +++ + GI + ++ + L T+T F A+ + VI ++ S+ Sbjct: 4 SIMVLDDHEIVHQGIVRVLQQNSAFA-ILGTFTRSRDFVQALRNKAPDLVIIDYALEPSD 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ + + ++P + LV++ D + ++ DG K ++ + Sbjct: 63 -ADGIGVIRMIRRQYPGIKILVLSAHDSPVTIALAMKAGA-DGYCIKNGSIADITAAIAK 120 Query: 130 SLNGVRQATDRLNNQWYINQ------------SRTLSPTEREILRFMSRGYSMTQIAEQL 177 L G ++ + + + L+ ERE+LR G ++ +IA + Sbjct: 121 ILRGASHIPAQVASLSVFGKEQGEGAPGSGGLTAALTEKEREVLRCFLDGMTVNEIAAKF 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLE 205 R+ KT+ HK + + KLG+ SD L + Sbjct: 181 SRSKKTVSGHKQSALRKLGIRSDNELFK 208 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 14/211 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + N+ + + M GI SL + E+ + + + +I S Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALE-IIKKGVVDFIILDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ L + P + L+++ ++ L ++G L K + E + Sbjct: 60 PEM---DGIELSKILKKQHPNVKILIVSTHS-NVMIVSRLIRIGVNGYLLKNAAKEELLK 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQ 176 + +G + L + N S+ LS E+EIL ++ Y+ +IAE+ Sbjct: 116 AINTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEK 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ T+ H+ N++SKL + AGL++ A Sbjct: 176 TFISLNTVNTHRRNLLSKLNAKNTAGLVKYA 206 >UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1 Tax=Burkholderia thailandensis MSMB43 RepID=UPI00016AE77A Length = 194 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 11/180 (6%) Query: 38 LHTYTSQESFQDAMSRISFAAVIFSFSAM--RSERREGLSCLTELAIKFPRTRRLVIADD 95 + T S D ++R VI ++ + +G++ L+ + + P +V Sbjct: 2 VGTARSPGDLVDMLTRRECDVVISDYTMSSGCEKYSDGIAMLSLIRRRHPGVGLVVFTAI 61 Query: 96 DIEARLIGSLSPSPLDGVLSKASTLEIF--------HQELFLSLNGVRQATDRLNNQWYI 147 D +I SL + + SK + +E +LS + + Sbjct: 62 D-NPGVIRSLLSKHISCIFSKRDHADEMPAAVRAAKSEEAYLSPVIASIVRESKTDAPTS 120 Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 N+ L+P E E++R G ++ +IA +L+R+ +TI + K N M K+ + + L++ A Sbjct: 121 NRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLIKYA 180 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L + + I+ + R H + E A+ V+ Sbjct: 4 VVLADDHRLIRQAIDGMLRDIPDIQIVAHA-ENAEHAVAAVREQEPDVVLMDLQMPGMG- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + L P+ + + +L G + K + + + + Sbjct: 62 --GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGA-KGYVHKGADRDELIEAIRSV 118 Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G R + +N L+P E E+L + G T IA+ L + K Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ ++ + +LGV +DA L A Sbjct: 179 TVSTYRSRIFERLGVRNDAQLTRIA 203 >UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia RepID=C4KLT2_BURPS Length = 221 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M + + R V + + + + G + + + +S ++ AM V+ Sbjct: 1 MSNVALHTRKVVVADDHPIVLRAVTDYVNSLPGF-HVVASVSSGDALLSAMREQEVNLVV 59 Query: 61 FSFSA-MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 F+ ++ ++GL ++ L + RT +V + +I L + G++ K Sbjct: 60 TDFTMHQANDDKDGLRLISHLMRAYERTPIIVFTML-TNSGVISQLCRMGVAGLVGKEEE 118 Query: 120 LEIFHQELFLSLNGVRQ-----ATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSM 170 + + GV Q RL I L+P E E++R + G S+ Sbjct: 119 IAELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSL 178 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 T IA L R++ T+ K + M KL V ++ L+ A Sbjct: 179 TDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCA 215 >UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JP13_9BACT Length = 211 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 13/212 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V LIE ++ ES+ R G + Y E A + VI ++ Sbjct: 3 VVLIEDQILFRELTESIVRTDFGLD-VVGQYDDGEEGLQACLDLQPDLVILDLKI---KK 58 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------I 122 GL+ + + P + + + ++ + ++G+++K S++E I Sbjct: 59 LGGLTVFNRIKDRTPECKVI-LVSAHFTPEIVKNTVERGVNGLVTKNSSIESLKDAIGQI 117 Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++ S + + N+ Y + + L+P E ++L+ + GYS +IA +++ Sbjct: 118 LKGAVYYSPEAYKLLRQPITNKDYNDSLKMLTPRETDVLQMVGEGYSSKEIARSFNLSVR 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 TI AH+ N+M KL + + A L + Sbjct: 178 TIDAHRSNIMRKLNLRGATDMTRLAVKLKLVS 209 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 21/223 (9%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + GI L G + + ++ + V+ R R + Sbjct: 3 VADDQAIVREGIVMLLGLLPGIE-VVGAAKDGDEAVALVAEKAPDVVLMDL---RMPRCD 58 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------IFH 124 G+ + + PRT+ +V+ + L +L G L+K + E + Sbjct: 59 GVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGA-RGYLTKDARGEEIVQAIDAVMS 117 Query: 125 QELFLSLNGVRQATDRLNNQWYINQS--------RTLSPTEREILRFMSRGYSMTQIAEQ 176 E LS R+ +R+ + L+P E E+L ++ G S +IA Sbjct: 118 GEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARA 177 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 L + T++ H N+ +K G + A R TS Sbjct: 178 LHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPRTS 220 >UniRef50_B4CYR7 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B4CYR7_9BACT Length = 212 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 16/205 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++++E + G + + G + Y S E+ + + V+ + Sbjct: 4 TLSIVEDDPVIRAGWVKIINRSTGYRC-ISDYGSAEAALAGLVKEPPDFVLMDINLPG-- 60 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH----- 124 + G+ C EL + P+ +++ D L +L +L + S + Sbjct: 61 -KSGIECTRELKRRLPKLEIVMLTMFDDRDNLFEALRAGASGYLLKRTSPAGLLEALNQL 119 Query: 125 --QELFLSLNGVRQATDRLNNQWYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQL 177 +S RQ ++ LS E EILR ++ G +IA+QL Sbjct: 120 KAGGSPMSPQIARQVVHFFRQNEPAAEANGAVIEKLSARENEILRCLAEGRHYKEIADQL 179 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAG 202 ++ T+R + KL V S Sbjct: 180 NLSMDTVRTYIRRTYEKLHVHSRTE 204 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 77/201 (38%), Gaps = 8/201 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ G+ L + G + S E R + V+ Sbjct: 7 VLLVDDHPFVLDGVR-LRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMP---D 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL A +FP R + ++ + + + VL +A E+ ++ Sbjct: 63 ANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVA 122 Query: 131 LNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + ++ + R L+P E +L+ ++ G S +IAE+L +++T+ Sbjct: 123 AGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVET 182 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 H+ ++ KL V A L++ A Sbjct: 183 HRLHLRRKLRVGGRAELVKYA 203 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 123 bits (308), Expect = 6e-27, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 79/205 (38%), Gaps = 12/205 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G+ + + + T+ + + V+ S Sbjct: 4 IIIADDHTIFREGLRQILAEANDFT-LVGEATNGDDLLVRLREAPCDIVLLDLSMPGISG 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123 + E+A R +V++ + ++ +L V +++ ++ Sbjct: 63 ITLVRAAREIAGAH---RIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVS 119 Query: 124 HQELFLSLNGVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ELF+S ++A R + L+ ERE+ + G+ +++IA L +IK Sbjct: 120 QGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIK 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ HK N+++K+ + A L+ A Sbjct: 180 TVSTHKTNLLAKMDAETTADLVRYA 204 >UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1 Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO Length = 222 Score = 122 bits (307), Expect = 6e-27, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 4/199 (2%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + +G+E + T QE ++ FS E Sbjct: 17 VGLVDDHPIILLGLEQFLSQQMDIELVFSVSTIQEYLIRVKDSAPCDVLVIDFSMP-DEA 75 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 ++G + L +A + R ++++ + I + ++ K + + + + Sbjct: 76 KDGFAWLR-VAQETARNAKIILFTSQLYLTKICQGKNVGVCEIIYKGDSQLALLESIRTA 134 Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190 + + + + ++ L+ E E+L +++ G S+++IA + +R+IKTI K + Sbjct: 135 ADIEGRVKPEMES--CDKEANRLTKKEWEVLLWIAEGMSVSEIASKKQRSIKTISTQKRS 192 Query: 191 VMSKLGVSSDAGLLEAADI 209 VM KLG+ +D GL+ ++ Sbjct: 193 VMKKLGIKNDFGLMSYLEL 211 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 81/207 (39%), Gaps = 17/207 (8%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR-ISFAAVIFSFSAMRSERR 71 ++E + G++ L K+A + + D +++ V+ + Sbjct: 6 IVEDHTIVRQGLKQLLAKYAEMKVLAE-FGVPDQIMDNLAKGERPDIVLCDINLPGM--- 61 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +GL+ ++ K+P + +++ E ++ + + DG K + + Sbjct: 62 DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKA-FDAGADGYFHKDTEESELIMGIKKIY 120 Query: 132 NGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 NG + ++ N TL+ E+E+L + G +I ++L + Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ H+ N++ K G+ + L++ A Sbjct: 181 TRTVENHRANILRKFGLKNTVELVKFA 207 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 82/202 (40%), Gaps = 14/202 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ ++ G+ ++ G + + + D ++R V+ Sbjct: 16 VLIVDDHELARAGLAAVLACEPGIE-VVGEADNGAAALDFVARHPVDLVMMDLQMP---V 71 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 +G+ + P +++ L+ +L +L AS E + Sbjct: 72 IDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVL 131 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 E FL+ + V Q RL + + + L+P E+++LR + +G + +IA +L + Sbjct: 132 RGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIIS 191 Query: 181 IKTIRAHKFNVMSKLGVSSDAG 202 T++ H ++++KLGVS Sbjct: 192 PGTVKVHVEHIIAKLGVSDRTQ 213 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 15/166 (9%) Query: 54 ISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGV 113 + VI S G+ + P TR + + + E ++ L + Sbjct: 27 LKPDVVIMDISLP---DMSGIEATRLIKEAVPETRVIGLTMHEEEPFVLEFLRAGADAYI 83 Query: 114 LSKASTLE-------IFHQELFLSLNGVRQATDRLNNQWYI-----NQSRTLSPTEREIL 161 + +++ + + + L R + ++ + L+P EREIL Sbjct: 84 VKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVGQPEEPCPLTPREREIL 143 Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++ G + +IA +L + KT++ H+ N++ KLG+ L+ A Sbjct: 144 VLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRTELVRYA 189 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 122 bits (307), Expect = 7e-27, Method: Composition-based stats. Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 8/201 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + L++ + G L + + +++ S ES A +R F V+ S Sbjct: 11 TLLLVDDHAVVRAGYRRLLEQAS-RCWQVTEADSGESAYRACARERFDVVVMDISLPG-- 67 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL L L + P R L+ + + E G ++K+S E+ + + Sbjct: 68 -ISGLETLARLQRRAPEIRVLIFSMHE-EPVFAEQALSGGAAGYITKSSAPEVLVEAVQR 125 Query: 130 SLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + + + ++LS E EI R ++ G +IA L + KT+ Sbjct: 126 IAAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVAN 185 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 + + KL +++ A + A Sbjct: 186 YGSGIREKLALNNVAEMTRLA 206 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 34/205 (16%), Positives = 82/205 (40%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + + G+++L + +E+ A I + + Sbjct: 5 ILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIA-GEIRPDVTVMDVMMPQM-- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123 +G+ + +R + ++ + + L L +L ++ E + Sbjct: 62 -DGIEATRRIVEDG-SSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVM 119 Query: 124 HQELFLSLNGVRQATDRLNNQWY-INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 E++L + + + + L+P E+EIL ++ G + ++AE+L +IK Sbjct: 120 DGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIK 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ H+ ++M+KL + + A L++ A Sbjct: 180 TVGTHRQHIMNKLKLKNLADLVKYA 204 >UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT Length = 219 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 14/214 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +K V ++E + G+ L + + A+ + ++ Sbjct: 6 QKARVLIVEDHEIFREGLAQLINRQPDF-MVCGECDDPKGIAAAIEKAEPDVLLLDLML- 63 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH-- 124 G+ + +L FP+ R LV++ D +L L V+ + ++ ++ Sbjct: 64 --HGAGGIDLIKQLHTLFPKVRILVLSMHDETVFAPRALRAGALGYVMKQEASGQVLAAL 121 Query: 125 -----QELFLSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQ 176 EL +S R ++ + LS E + + G +IA + Sbjct: 122 RAVVVGELHVSRKVGITLMQRAIKMPELSAADGVAKLSDRELHVFELIGAGIPTREIATR 181 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 L +IKT+ H+ N+ KL + S L+ A Sbjct: 182 LGISIKTVETHRENIKHKLELQSGTELVTRAKEW 215 >UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6Y109_PEDHD Length = 224 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 15/210 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 N+ L E + GI+ L ++ + S ++ + Sbjct: 11 NLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSIDLLLTDLNMPG-- 68 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+S ++E+ P + ++++ D E + + +L E+ ++ Sbjct: 69 -INGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKYI 127 Query: 130 SLNGVR-----------QATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQL 177 S G + R+N+ + ++ S E EIL ++ G + ++A++L Sbjct: 128 SRGGSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADRL 187 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +T+ H+ ++ K G + A L+ A Sbjct: 188 FISKRTVEGHRQSLTDKTGCRNTAALIRYA 217 >UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia RepID=A4TJY3_YERPP Length = 210 Score = 122 bits (307), Expect = 8e-27, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 82/208 (39%), Gaps = 11/208 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 ++V +++ + I +L + + E+ + + VI Sbjct: 3 KSVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEK-LKNNPVDLVIIDIELP-- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE------- 121 +G S L +L + + L ++ + + + +L + E Sbjct: 60 -NFDGFSLLKKLQQRGFTGKSLFLSAKNEQVFAVRALQAGANGFISKNKDISEILFAAQN 118 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + F + Q + ++ +N++R LS E +LR++ G S QIA+++ + Sbjct: 119 VLRGYSFFPSETLTQLAGQPSSHDPVNRARLLSEREINVLRYLVNGLSNKQIADEMFISN 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADI 209 KT+ +K +++KLG+SS L + A Sbjct: 179 KTVSTYKTRILTKLGLSSVIELADYAHT 206 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 8/201 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ M +G++S +E A+ + V+ + Sbjct: 6 VMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALE-VKPDVVVMDLVMP---K 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ L ++P+ + +++ ++ L +L +S EI ++ Sbjct: 62 MTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVA 121 Query: 131 LNGVRQATDRL----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 L T+ +++ + + L+ EREIL +++GY +IA++ ++KT++ Sbjct: 122 LGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKT 181 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 H N++SKL VS + A Sbjct: 182 HVSNILSKLAVSDRTQAVVYA 202 >UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4 Tax=Flavobacteria RepID=A4CPM8_9FLAO Length = 226 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 89/217 (41%), Gaps = 13/217 (5%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 + K NV + + + +GI+ + + G+ L + + +S+ + +I Sbjct: 12 IDKQTKMINVLIADNHPVVRLGIKQVL-ENDGDIQVLGDVGTTTALFQMLSKATPDVLIL 70 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 G++ L ++ ++P + L+ + + + ++ G LSK++ L Sbjct: 71 EMDIPE---INGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGA-RGYLSKSAELS 126 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQS--------RTLSPTEREILRFMSRGYSMTQI 173 + +G T+ L + ++ R LS E E+L+ ++ G ++ Sbjct: 127 YLADAVHKVSDGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEV 186 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 A L N KT+ +K +M KL V + LL+ A L Sbjct: 187 ALGLNLNEKTVSTYKARLMKKLNVDNMVDLLQQAKAL 223 >UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2 Tax=Flexibacteraceae RepID=C6W5G0_DYAFD Length = 219 Score = 122 bits (306), Expect = 9e-27, Method: Composition-based stats. Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 18/217 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + + + G S+ + L QE + V Sbjct: 1 MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQELLDRLPANTP-DIVFMDLQM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI--- 122 +G+ +FP + +V++ + + +I L +L S E+ Sbjct: 60 P---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKGVQGYLLKDTSPDEVEKA 116 Query: 123 ---FHQELFLSLNGVRQATDRLNNQWYINQ--------SRTLSPTEREILRFMSRGYSMT 171 H+E F + V +A R +N+ + LS E+E+L+ + G S T Sbjct: 117 IRRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLSTT 176 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 +I ++L +++T+ H+ V+ K G S A + A Sbjct: 177 EIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAY 213 >UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2 Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD Length = 207 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 11/211 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V +I+ + G+++L G + +S A+ ++ + Sbjct: 2 DVFIIDDHPIVLQGLKNLLESREGIR-VTGIFDQADSALAALDSHIPEVMLMDINLP--- 57 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G++ ++ P R + ++ E +I S+ S G + K + + L Sbjct: 58 DISGVTLCQQVKQAHPEIRVVALSIH-NERSVIMSMLQSGASGYVLKNAIGDDIVAALQA 116 Query: 130 SLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 ++ G + L+ E+EIL + +GY+ QIA +L + T Sbjct: 117 AMEGQIYLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHT 176 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 + +H+ N+ K GV + A ++ A L MR Sbjct: 177 VESHRKNLKEKFGVPNTATVVRMAAELGLMR 207 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 79/211 (37%), Gaps = 18/211 (8%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR---ISFAAVIFSFSAM 66 +V L++ + G L A +H A R + V+ S Sbjct: 7 SVLLVDDHAVVREGYRRLLELNAD----VHVCGEAADAAQAYQRFCALRPDVVVMDVSLP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ + + + P R L+ + + + +L L G ++KAS ++ + Sbjct: 63 G---ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGAL-GYVTKASAPDVLVEA 118 Query: 127 LFLSLNGVRQATDRLNNQWYIN-------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + + ++ + R LS E E+LR + +GY++ IAE+L Sbjct: 119 VRTIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGL 178 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 + KT+ H+ + K G + L + A L Sbjct: 179 SQKTVANHQSVIRQKFGADNGVQLAQMASRL 209 >UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KCH2_PSEF5 Length = 208 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 13/206 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 ++V +++ + I + S + + + VI S Sbjct: 3 KSVLIVDDHPVVCEAIRKTLESQGYT--IVGETADGISALNMILSLRPDIVILDVSL--- 57 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 E+ +GL+ L +A R LV ++ + L G +SK L + + Sbjct: 58 EKMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGA-SGFVSKNEPLTKLLKAVD 116 Query: 129 LSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G + + + L+ E E+L+ ++ G + +IAE+L + Sbjct: 117 TIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSN 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ HK N++SKLGV+S L+ A Sbjct: 177 KTVSGHKINILSKLGVTSVVDLVNIA 202 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 86/213 (40%), Gaps = 17/213 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V ++E + G+ S+ G +E+ Q A+S ++ S Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCP-DLILMDLSLPGM- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127 G+ + + + P R + ++ + + +L +DG + K ++ + + Sbjct: 64 --NGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRA-GVDGYVLKDTSFDDLVTAMRV 120 Query: 128 ------FLSLNGVRQATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSMTQIAEQL 177 LS + + ++ ++T L+ ER +L+ ++ G S Q+ + Sbjct: 121 VLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYM 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 + KTI ++ ++M KLG+++ L+ A + Sbjct: 181 NLSPKTIEKYRASLMRKLGITNLTELVLIAISM 213 >UniRef50_B2JLH9 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia phymatum STM815 RepID=B2JLH9_BURP8 Length = 219 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 12/207 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69 + + + + + G + E +S+ + +I F+ Sbjct: 9 IVIADDHPVIRHAVIHALNGLPGFTVDAAVKSGAE-LLGVLSQGKWDLIITDFTMDTGKS 67 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +GLS + +L + P +V + + L LS S + GV+ K +E F Sbjct: 68 ETDGLSLIGQLCRQHPDVPVVVFTMLNNDDMLAR-LSRSGVAGVVDKCEGVEEFRSAALE 126 Query: 130 SLNGVR-----QATDRLNNQWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 ++ R + RL + + N R L+ E E++R + G S+T IA L R+ Sbjct: 127 VMHHRRPYFSAKIRMRLQHLNFGNGRRGGEPALTKKELEVIRLFASGASLTDIARHLNRS 186 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + TI K M KL + ++A L++ A Sbjct: 187 LSTIATQKSAAMKKLYLQTNADLVKYA 213 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 122 bits (305), Expect = 1e-26, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 13/208 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFSFSAMR 67 V +++ M G+ + + Q + + + ++ Sbjct: 9 VMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMMPG 68 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF---- 123 +G+ +L +++P + +++ + ++ G++ + VL S E+ Sbjct: 69 M---DGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALH 125 Query: 124 ---HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 ++ + + T L + + L+ E+E+L ++ G S +I E+L + Sbjct: 126 GAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHIS 185 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 +KT++ H N++ K + L A Sbjct: 186 VKTVKTHVSNLLMKCELEDRTQLAVLAH 213 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 121 bits (304), Expect = 1e-26, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 9/205 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + L + V+ G+ +L + S D + + S Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLE-VVGEAASGTETVDCVRATEPRVLCLDLSM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 ++ +T+LA PRTR LV+ + A + +L+ L K + Sbjct: 60 PGWGSATTITRVTQLA---PRTRVLVLTMHNDPAYVRSALAAGAAGYFL-KTTPSPDLLA 115 Query: 126 ELFLSLNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G R D L + LS E E+L + +G + +IA+QL ++ Sbjct: 116 AIRAVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSV 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206 KT+ ++ + K G+ + A + Sbjct: 176 KTVETYRARLREKTGLKTRADYVRY 200 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 43/231 (18%), Positives = 89/231 (38%), Gaps = 18/231 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 ++HS + V + + + G+++L + + A+ + + Sbjct: 13 IKHSSPSRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAID-LDPDVAV 71 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 F S G+ + +L P R LV++ + A L L +L +++T Sbjct: 72 FDLSMPG---LNGIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATE 128 Query: 121 EIFHQELFLSLNGVR-----------QATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169 E+ ++ G+ + ++ LS E+E+L+ + G+S Sbjct: 129 ELVRGIHAVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHS 188 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 I+ +L+ K++ +K M KLG +S L+ A L M E++N Sbjct: 189 NKVISAKLEVGPKSVETYKARAMEKLGFTSRVDLIRFA---LSMGWLESTN 236 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 13/204 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G++ + +E + + VI + Sbjct: 5 ILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQAN-DYDMVILDITMPG--- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 R GL LTE+ P+ LV++ E + + S G L+K S L Sbjct: 61 RNGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRA-YKSGAAGYLNKGSASNELLDALHKI 119 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++S L++ + ++LS E +++ ++ G ++ +IA +L ++K Sbjct: 120 SMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVK 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 T+ ++ +++ KL + ++A L Sbjct: 180 TVSTYRAHILRKLNMKNNAELTRF 203 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 16/215 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 + I+K + + + + GI + T QE+ + R +I Sbjct: 2 TDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIE-MTRRYQPQVIIMDI 60 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 + G+ + ++P+ L + D E +I L S + G + K + E Sbjct: 61 NMPG---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIE-LLRSGVSGYVLKDISAEEL 116 Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQ 172 Q ++ G R + + + L+ EREIL +S G S + Sbjct: 117 VQAVYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNRE 176 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IA +L + KT++ H ++ K+GVS A Sbjct: 177 IARELFISEKTVKNHLTHIFHKIGVSDRTQAALYA 211 >UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1 RepID=A3HV51_9SPHI Length = 214 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 86/203 (42%), Gaps = 14/203 (6%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 L++ + GIE L L +T+ +S Q+ +S + +I S + Sbjct: 8 LVDDHPIVMEGIEMLL-LEIPEIQLLGKFTNGKSAQEFLSVTAVDLIITDISMPE---LD 63 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 GL + P T+ ++++ D + + + +G L K +T E + L+ Sbjct: 64 GLQLTKWVKQNHPETKVIILSMHDNDHYVQEIILADA-EGYLLKENTSEELVNAVNRVLD 122 Query: 133 GVRQATDRLNNQWYINQS---------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 +D++ + N ++LS E ++L+ + + + +IA++L + T Sbjct: 123 DGIYYSDQIVGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIADKLFISRHT 182 Query: 184 IRAHKFNVMSKLGVSSDAGLLEA 206 + +HK N+ K +S GL++ Sbjct: 183 VESHKKNLFKKTDQNSLVGLVKF 205 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V L++ + G + ++ Q A + V+ F+ Sbjct: 7 SVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLA-GELHPRVVVMDFAMPSM- 64 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G + P T L+++ EA + + + + G L K + + Sbjct: 65 --NGAVAARHILRTAPETAILILSMH-AEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQ 121 Query: 130 SLNGVRQATDRLNNQWYIN--QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G + RL + L+ E E+L+ + G S +IA L + T+ H Sbjct: 122 VAAGKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAVH 181 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 + N+M LG+ + A L+ A Sbjct: 182 RANIMQTLGIHNTAELVVYA 201 >UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR family protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GQJ8_9BURK Length = 207 Score = 121 bits (304), Expect = 2e-26, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 80/207 (38%), Gaps = 13/207 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + +++ ++ G+ + +F G Y + + +F AV+ + Sbjct: 3 ILIVDDHMIIRRGLVQILDEFDG-QYHSEQAADGVEAMQKLRKDNFDAVLLDVAL---GE 58 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 R+G L + +FP+ ++++ + ++ + L+K + Q L ++ Sbjct: 59 RDGFDVLKSVRSEFPKLGVVMLSVYPEAQFALRAIRSGA-NAYLNKGCSPAELTQALQMA 117 Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G T N + LS E ++LR M++G ++ IA+ L + Sbjct: 118 CAGQVYLTPATANLMANDLRKPADRPPHERLSNREMQVLRLMAQGETVQHIAQALCLSGN 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209 T+ ++ V KL + + L+ + Sbjct: 178 TVSTYRARVFEKLELKNLVDLVNYTKL 204 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 41/225 (18%), Positives = 85/225 (37%), Gaps = 15/225 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 N+ L++ + GI L G + + A+ + F ++ S Sbjct: 4 NILLVDDHAIVRQGIRQLL-IDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLE 121 G+ L L K PRT L+ + + + +L G LSK + + Sbjct: 60 DTNGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAA-GYLSKTVNAAQMIGAIQQ 118 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + ++S + ++ + LS E + L ++ G +T IA L ++ Sbjct: 119 VAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSV 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA--ADILLCMRHCETSNVLHP 224 KT+ ++ ++ K+ +S++A L ++ L+ M + P Sbjct: 179 KTVSVYRSRLLEKMRLSNNAELTFYVMSNRLVDMAPTAGAGSSRP 223 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 79/219 (36%), Gaps = 17/219 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 + H + V L + + G+ +L T +E+ Q A +++ ++ Sbjct: 23 LTHKSMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMA-QKLTPDVIL 81 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + GL ++A P + LV++ E + L+ + G L K + Sbjct: 82 MDIAMPLM---NGLEATRKIAEVAPSAKVLVLSSY-GEDDYVQKLTEAGASGYLIKHAAA 137 Query: 121 EIFHQEL--------FLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGY 168 + F S ++ D++ N S L+ E E L + G Sbjct: 138 NDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGK 197 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IA + +IKT+ H+ VM+KL + A L A Sbjct: 198 PNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYA 236 >UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK Length = 210 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 10/209 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +I+ + G E++ R+ G + +Y A+ + F + ++ Sbjct: 5 TAMVIDDHYLVRQGFEAVARRIPGLS-IIGSYERSRDLIAAIELCPPQVLYLDF-VLHTD 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL+ + + +FP + +V++ + S+ G K S++ + Sbjct: 63 DVGGLTLIRLIKRRFPIVKIIVVSAHANAGIVSLSIRAGA-SGFCFKTSSVSDLTEATSR 121 Query: 130 SLNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 L G V + + + L+P ERE++ + G S++ I+++L R+ K Sbjct: 122 VLGGKVYIPKFVDECAVNRDLNDRPDAFEILTPREREVVNLILIGMSISDISKKLVRDRK 181 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILL 211 TI HK KLGVSSDA L +L+ Sbjct: 182 TISGHKQTAYRKLGVSSDAELFSIKHLLM 210 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 121 bits (303), Expect = 2e-26, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G + + E+ + V+ S Sbjct: 11 VVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQP-DVVLMDVSMP---I 66 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + + P T+ L++ D ++ + + +L + S L+ Q + Sbjct: 67 MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALK-MVQAIKTV 125 Query: 131 LNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G + + + N+ LS E ILR +++G S +IA L + +T Sbjct: 126 HQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + H+ N+ KL + S A L + A Sbjct: 186 VETHRQNIKHKLDIHSTAELAQYA 209 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 120 bits (302), Expect = 2e-26, Method: Composition-based stats. Identities = 35/202 (17%), Positives = 81/202 (40%), Gaps = 12/202 (5%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 L + + G++S + T E+ + + + ++ + Sbjct: 6 LADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLE-LKPDVLLLDINMP---NLN 61 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125 G+ L +LA T ++++ D ++ S+ VL + E + Sbjct: 62 GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQG 121 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 +L + +++ N+ + TLS E ++L+ ++ G +IA+ L +++T+ Sbjct: 122 RSYLCPQASDRLLEQI-NEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 H+ + KLG +S A L++ A Sbjct: 181 THRLRIKKKLGATSTAALVKLA 202 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 82/205 (40%), Gaps = 13/205 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G++ + + + E+ + A ++ V+ S Sbjct: 9 VVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTK-GLDVVVLDISLP---D 64 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 R G+ + + P L+++ +A I +L + G LSK S + + Sbjct: 65 RSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAV-GYLSKQSASDQLVTAIRTV 123 Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 ++S D+++ TLS E + L ++ G S+++IAE L ++K Sbjct: 124 AKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVK 183 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ ++ ++ KL + +A L A Sbjct: 184 TVSMYRARLLEKLNLRHNAELTHYA 208 >UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD Length = 210 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 12/205 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + + G+ SLF+ G HT T+ D ++ ++ Sbjct: 4 VLIVDDHHLFAEGVASLFKPEDGIAVVKHT-TNGNEIPDILAGSDIDVILLDIDMP---I 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ----- 125 G++C+ L K +++ ++ +L VL AS E+ Sbjct: 60 LNGIACMELLKHKGYDKPVVMLTMHQSMRQVKDALEKGAQGYVLKDASKAELVQAINNAS 119 Query: 126 --ELFLSLNGVRQATDRLNNQW-YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + + Q D + + + LS E+EI++ ++ G + I+ L + Sbjct: 120 ERKNYFHPKINDQVFDYFRGKSVGKSGLQELSEREKEIIKCLAEGMNTKAISSSLYISEH 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T++ H+ N+M KL V + A L+ A Sbjct: 180 TVKTHRRNIMHKLNVKTSAELIRLA 204 >UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4 Length = 211 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 14/201 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 +AL++ + I L N + ++ S Q ++ + + ++ Sbjct: 4 IALVDDEAIVRDTIAFLLETTE-NLTLVGSFASAREAQQSLPQCAPDVILVDI---GLPD 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL+ + L + P LV+ D ++ ++ G L K E + + Sbjct: 60 ASGLTLIRALRPQLPHAEFLVLTVFDDNQHILEAIQAGA-SGYLLKRDLPEHLISAIRIV 118 Query: 131 LNG--------VRQATDRLNNQWYINQS-RTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G R+A + +Q + + L+P E+E+L ++RG S +IAE+L +I Sbjct: 119 HQGGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSI 178 Query: 182 KTIRAHKFNVMSKLGVSSDAG 202 +T+R H ++ KL + A Sbjct: 179 ETVRTHIRHIYRKLQARNRAE 199 >UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=Burkholderia RepID=A9APD3_BURM1 Length = 234 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 5/178 (2%) Query: 37 KLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDD 96 + Y + A + ++ +S R EGL+ L L P + + ++ Sbjct: 33 LVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRIEGLALLERLTRVRPEVGVVALVRNE 92 Query: 97 IEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT---- 152 ++ S+ ++SK + + + +G R + + + S Sbjct: 93 -SPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYSGGRYLSPLVRRALDASGSEPAPAK 151 Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 LS E E++R G + IA++L + +T+ A K + M KLG +D L+ A L Sbjct: 152 LSSREVEVIRLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRYAAGL 209 >UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS Length = 212 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 12/212 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K+ + L++ + GI + + H E + + +I S Sbjct: 1 MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEP-DILILDLSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL + +L ++ LV E I +L+ +G + K+S+ ++ Sbjct: 60 PG---INGLDIIPQLHQRWSAMNILVYTAYQQEYMTIKTLAAGA-NGYVLKSSSQQVLLA 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLK 178 L R LN + + + L+ ER++L+ + GY+ I+E+L Sbjct: 116 ALQTVAVNKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKLIDEGYTNHGISEKLH 175 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +IKT+ H+ N+M KL V LL A + Sbjct: 176 ISIKTVETHRMNMMRKLQVHKVTELLNCARRM 207 >UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter vinelandii DJ RepID=C1DSJ1_AZOVD Length = 211 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 38/205 (18%), Positives = 81/205 (39%), Gaps = 11/205 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V +++ + G+ L S + + R +F I + Sbjct: 3 SVLIVDDHQLFRSGLSRLLS-EDRKIAVEGEAASLPQAMEILRRQTFHVAIVDINLAG-- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 R GL L+ + +PR L+I+ + + E+ + Sbjct: 60 -RSGLELLSRIRHDWPRLPVLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTV 118 Query: 130 SLNGVRQATD------RLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G A+ ++ ++ + NQ L+ E +I + G +T+I E++ ++K Sbjct: 119 AKGGQYDASHPSATPAQVADERFANQPHLRLTDREMQIFNLIVTGARLTEIGERILLSVK 178 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ +K +M KLGV+++A L++ A Sbjct: 179 TVSTYKTRIMEKLGVNNNAELIQYA 203 >UniRef50_C6P0R1 Two component transcriptional regulator, LuxR family n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0R1_9PROT Length = 222 Score = 120 bits (302), Expect = 3e-26, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 18/219 (8%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS---RISFAAVIFSF 63 +K V +++ + G+ L LH + + A+ I Sbjct: 9 RKAKVMVVDDHAIIRQGMFMLI----NREPDLHACCEAANIEQAVEVNRACKHDIAIVDI 64 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST---- 119 S + GL + FP L+++ D +L ++ + +T Sbjct: 65 SL---DNASGLELVRRFQFLFPDLPILILSMHDESIYAEAALKAGARGYLMKQMATDVLL 121 Query: 120 ---LEIFHQELFLSLNG-VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 +I +L+LS R + NQ + LSPTE E+L + G ++IA Sbjct: 122 HAMRKILQGDLYLSDQMHSRMLKKMMGNQKSDSPVANLSPTELEVLHLVGLGMGTSEIAA 181 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +L R+IKTI +HK N+ KL + S L A L+ R Sbjct: 182 KLVRSIKTIESHKANIKKKLNLDSGNQLTLFAINLVSSR 220 >UniRef50_Q46SR4 Two component transcriptional regulator, LuxR family n=14 Tax=Burkholderiales RepID=Q46SR4_RALEJ Length = 232 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 9/202 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + +++ + +++ + G + L + ++ + + + + VI Sbjct: 28 TILIVDDHPAVRVVLKTHLSQVLGVTHVLEA-DNGQAAVEIVRQYAPDVVILDLDIP--- 83 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 R GL + L P R LVI+ D + + +G +SK L + + Sbjct: 84 RINGLDVIPRLKAIQPGVRILVISGQDQNTFAPRA-RQAGANGYVSKTQELPEIVRCVES 142 Query: 130 SLNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 L G D R + + +LS E I++ +++G S QI E L + KT+ Sbjct: 143 VLAGYSVMPDVDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTVS 202 Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207 HK +M KLG S +++ A Sbjct: 203 THKTRIMEKLGARSLVDVIDFA 224 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 120 bits (301), Expect = 3e-26, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 16/216 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K +V +I+ + G+ + + A + + I +I S Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADME-VCGSADDGPVALQKLFNIEPDIIIVDLSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 S +GL + + ++P LV++ + E + G + K+ + + Sbjct: 60 TTS---DGLEVIKAIKARYPNIFILVLSMRE-EMVFAERCVRAGASGYVMKSEKPSVIIE 115 Query: 126 ELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 L + G ++++ N + L+ E ++ + + G++ QIA Sbjct: 116 ALRKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +L ++KTI A + ++ KLG+ S L + A Sbjct: 176 TKLNLSVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211 >UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=B0TSG4_SHEHH Length = 222 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 15/211 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +K + L++ ++ GI SL A + E+ + +I S Sbjct: 3 EKITIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPT-LLILDISLP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL + +T+ L+++ + +L+ G L K S +E Sbjct: 62 G---LNGLEVARSVTKMKTKTKILMLSMHSDVEYVAKALTI-GSHGYLMKESAVEELETA 117 Query: 127 L--------FLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQ 176 + ++ N + D+L + L+ +R+IL+ ++ GYS +IAE+ Sbjct: 118 ISTLINDKQYIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAER 177 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +IKT+ H+ ++MS+L + AGL+ A Sbjct: 178 MSVSIKTVETHRAHIMSRLNIFDIAGLVRFA 208 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 13/204 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V + + + G+ + ++ + + V+ + Sbjct: 4 VLIADDHAVVRGGLRQFLSSTEEFDIVAEA-ANGQTALELVRTSGCDVVLLDITLP---D 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL L + P L+ + + + +L+ G L+K S L Sbjct: 60 LNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGA-SGYLNKDSPPAQILAALHTV 118 Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G R + L + LSP E +L +S+G +T+I EQ ++K Sbjct: 119 VAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVK 178 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206 TI ++ ++ KL ++S+A + Sbjct: 179 TISTYRARILEKLDLASNAEITRY 202 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 14/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L + M + +L + + +E A ++ V + Sbjct: 5 ILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQ-PVDLVCMDIAMPGM-- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127 +G+ L + P R + ++ + L + G ++K + + + Sbjct: 62 -DGIEATRRLLARHPALRVIGLSAFADRQFV-TDLLAAGARGYITKGEAGDELLRAIRTV 119 Query: 128 -----FLSLNGVRQATDRLNNQWYI-NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +L D L + + + L+ ER++L+ ++ G + QI ++L Sbjct: 120 CEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAA 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ H+ N+M KL + + A L A Sbjct: 180 STVEVHRRNLMRKLDLHNVAELTRYA 205 >UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteroidetes RepID=A5FNZ8_FLAJ1 Length = 221 Score = 120 bits (301), Expect = 4e-26, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 14/208 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR-ISFAAVIFSFSAMRSE 69 +AL++ V+ GI L ++ ++ + I +I Sbjct: 7 IALVDDEVLFRKGIAFLLQREDNIEIVFEASNGEDLVNKLLENEIKPDIIIMDLKMP--- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ + FP + + + D ++ + + + ++ + ++ + Sbjct: 64 VLNGVEATKIIRKSFPEIKIIALTSYDSKSFIANMIQVGAVAYLIKNTTPKDLIKTINEV 123 Query: 130 SLNGVRQATDRLN----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G L N ++ LSP E EIL+ + + + ++IAE L Sbjct: 124 NKKGFYYNESVLKTIQETIVSSKNSKGNLETSFLSPREIEILQLICQQKTTSEIAEHLFL 183 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +T+ H+ N++ K + AGL+ A Sbjct: 184 SPRTVEGHRNNLLLKTESRNIAGLVVYA 211 >UniRef50_C7PJC5 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteroidetes RepID=C7PJC5_CHIPD Length = 208 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 12/206 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + + + + G++++ G T +E+ + A + ++ + Sbjct: 4 IFITDDHPIVREGLKNVLNATEGFAVTGTCSTGKETLE-AFEKKEPDILLLDINLP---D 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ + K P + ++ EA +I S+ G + K + EI + + Sbjct: 60 INGVELCAAVKKKHPDVYVIALSVH-NEAPIINSILRQGASGYIQKNALSEIIVEAIQDV 118 Query: 131 LNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 L G R+ R + + Q ++ E+EIL+ + G ++ QIAE+L + T Sbjct: 119 LKGGSYVCEQSREILRRQRGKGGLTQLPKMTRREKEILKLAAEGLTIAQIAEKLFISPYT 178 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADI 209 + +H+ N+M K V+S A ++ A Sbjct: 179 VESHRKNLMDKFEVNSVAAAIKLAGQ 204 >UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B1ZN14_OPITP Length = 215 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 13/207 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + ++E + + R A + Q + + + ++ Sbjct: 2 KRLVIVEDQTAIREMLVEILRLDANYQLVGESGDGQSALALCLE-VKPDLLVLDAKLPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ L ++ K R LV + + LI + + G + K + L F + L Sbjct: 60 --LNGVDLLRRISKKLSGMRVLVFSGHE-NPVLIREMLEAGAHGFVEKTAGLFEFKKGLE 116 Query: 129 LSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 +G + + N N + L+ EREIL+ ++ +S +IA +L + Sbjct: 117 TVASGGTYFGPAVAALLRNVVANPSASNTADFLTDREREILQLVAESHSTKEIAAKLGIS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207 IKT+ H+ N+M KL + A L A Sbjct: 177 IKTVDNHRTNLMRKLNLHDVASLTRYA 203 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ L ++ G + ++ E F + V F+ Sbjct: 6 IILVDDHSLFRSGMRGLLDRYDGIR-VVGEASTGEEFLAMLPATEADVVFMDFAMPGM-- 62 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G + P + + ++ E + ++ + E+ ++ Sbjct: 63 -NGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVA 121 Query: 131 LNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + L + Y LS E EIL + RG S +IA++L + Sbjct: 122 AGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISK 181 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 +T+ H+ N++ K G + A L+ A Sbjct: 182 RTVDKHRANILEKTGCKNTASLVVYA 207 >UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3 Tax=bacterium Ellin514 RepID=B9XH34_9BACT Length = 226 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 13/209 (6%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 EH+ + + +A++E + GN +++E+ S ++ V+ Sbjct: 11 EHADVSTK-IAIVEDNATLRQYLAEFVAGAPGNRCVCACGSAEEALVKIPS-LNPDVVLM 68 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 G+ C L K P + +++ + +L VL ++ E Sbjct: 69 DIHLPGE---SGIVCTARLREKLPNLQVIMLTVYKDTKMIFQALKAGACGYVLKRSDDKE 125 Query: 122 IFH--------QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 I S + + +++ LS E+EIL ++ G S +I Sbjct: 126 ILEAIAEVRAGGAPMTSEIARMVVRSFIADTPEKDETGQLSGREQEILALLAEGLSNKEI 185 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202 +L + T+R H ++ KL V Sbjct: 186 GSKLNISFTTVRTHLMHIYEKLHVRCRTE 214 >UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria RepID=NARP_ECOLI Length = 215 Score = 119 bits (299), Expect = 5e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 13/200 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G+ L G+ + D +R+ ++ + Sbjct: 9 VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASA-IDLANRLDIDVILLDLNMKGM-- 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL L L + +++ D + + +L + DG L K S E+ + + Sbjct: 66 -SGLDTLNALRRDGVTAQIIILTVSDASSDVF-ALIDAGADGYLLKDSDPEVLLEAIRAG 123 Query: 131 LNGVRQATDRLNN--------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G + ++R+N + L+ E ++L +++G S QIA L + + Sbjct: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183 Query: 183 TIRAHKFNVMSKLGVSSDAG 202 T++ H N++ KL V S Sbjct: 184 TVKVHIRNLLRKLNVRSRVA 203 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 7/200 (3%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ +L + E ++ + V+ + Sbjct: 4 IVLVDDHPILRHGMRTLLDTQEDFE-VVGDCGDPEEYRLLLKSARPDIVLMDLALGGD-- 60 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 +G++ P T LV D +A + SL G L K ST + + Sbjct: 61 TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGA-SGYLLKDSTPVELFAAIRTA 119 Query: 131 LNGVRQATDRLNNQWYIN---QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 +G + + ++ +L+P E E+L ++ G + Q+ E+L + T++ H Sbjct: 120 RDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTH 179 Query: 188 KFNVMSKLGVSSDAGLLEAA 207 ++ +KLGV + A + A Sbjct: 180 VNHIFTKLGVDTRAAAVSRA 199 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 16/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + L++ + ++ + ++ + VI + Sbjct: 7 TILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCP-NIVIMDINMP--- 62 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ ++ K P + + ++ + + S+ + G L K S+LE H + + Sbjct: 63 DLNGIEAAKQIISKNPDIKIIALSML-CDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILM 121 Query: 130 SLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 +G N + + L+ ER +++ ++ GY+ +I+E+L Sbjct: 122 VASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLN 181 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + +T+ H+ N M+KL + + AGL A Sbjct: 182 ISKRTVDVHRTNTMNKLKIHTIAGLTRFA 210 >UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1 Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM Length = 226 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 22/223 (9%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS--RISFAAVIFSFS 64 K VAL++ + + G+ + A + Y S A S + +I + Sbjct: 6 TKITVALLDDHPIVTFGLALRLQDEAD-ITIVGCYASASDLIAAFSVRTMHIDVLITDYQ 64 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 + +G++ + L IK P + +V + + ++ +++ + G + K LE Sbjct: 65 LRPGD-IDGINLIRLLKIKMPAVKIVVSSVFHTLSTVMLAMNA-GVRGFVGKEEPLEHLV 122 Query: 125 QELFLSLNGVRQATDRLNNQWYI-----------------NQSRTLSPTEREILRFMSRG 167 + + G + L+ + TL+ ERE+LR + G Sbjct: 123 KVVREVARGAHRVNSLLDAEAGAYHAASVATAKNGTSRACQAPVTLTLREREVLRCFATG 182 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 S++ IA + +R++KTI K + KLG+ +D L D L Sbjct: 183 MSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVDKL 225 >UniRef50_C6XUH9 Response regulator receiver n=2 Tax=Pedobacter RepID=C6XUH9_PEDHD Length = 210 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 9/202 (4%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +IE G L + ++TY S ++ + + R + +I + Sbjct: 9 VVIIEDDQTIREGYTYLINNTSPYQ-VVNTYPSFDAARQKIGRDNPDVIILDIQMPGT-- 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ L L P +++ + E ++ +L+ G +K + + + Sbjct: 66 -NGIDALPLLKKTLPDVYIIMLTVHETEKIILEALANGA-SGYFTKNTPSSKIIEAIKDV 123 Query: 131 LNGVRQATDRLNNQ----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 L G + + + N L+ E +IL MSRG +QIA +L I+T++ Sbjct: 124 LQGGGPMSPNVAKKVITSLQKNPDSPLTKRETQILSLMSRGKDRSQIANELFIEIETVKT 183 Query: 187 HKFNVMSKLGVSSDAGLLEAAD 208 H N+ KL V+S A ++ A Sbjct: 184 HIKNIYLKLDVNSKADAIKVAK 205 >UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL94_9BACT Length = 215 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 14/205 (6%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72 + + + G+ + + T QE+ + + V+ + + Sbjct: 6 IADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQH-HPDVVVMDVTMP---KMN 61 Query: 73 GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132 G+ + + L ++ + + L L + S+ E+ +S Sbjct: 62 GIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSG 121 Query: 133 GVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + +L + +++ LS ERE+L +++G S ++A L + Sbjct: 122 ETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKN 181 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207 T+ H+ +M KL + A L+ A Sbjct: 182 TVDTHRRRIMEKLDCGNIAELIRFA 206 >UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa RepID=B7V7K0_PSEA8 Length = 212 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 5/183 (2%) Query: 23 GIESLFRKFAGNPYKLHTYTSQESFQDAMSRISF-AAVIFSFSAMRSERREGLSCLTELA 81 ++ + G L +S + ++ + + +I R+G+ + L Sbjct: 22 ALQRYLSEECGRQ-VLAVVGDSDSLVERLADLPPESILITELGLPGQRSRDGIHLVEWLT 80 Query: 82 IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRL 141 P+ + +V + L ++ S +SK S LE L G L Sbjct: 81 RHCPQMKVMVYSVFS-APLLAKAVLRSGASAYISKRSPLETLKAALECMALGQTFLDPGL 139 Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201 + Q + + LSPTE +ILR ++RG ++++IA++ R++ TI HK N M K+G++SDA Sbjct: 140 HPQRHTG--KPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDA 197 Query: 202 GLL 204 L+ Sbjct: 198 ELI 200 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 119 bits (299), Expect = 6e-26, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 16/209 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V ++E + GI++L E+ + + + + V+ + Sbjct: 4 TVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALR-IVEKHAPDIVLMDLTLP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 EG + E+ + T+ L + ++ + +LS DG L K ++ +I Q + Sbjct: 60 VMEGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGA-DGYLLKNASRDILFQAMQT 118 Query: 130 SLNGVRQATDRLNNQWYINQSRT-----------LSPTEREILRFMSRGYSMTQIAEQLK 178 L G R + +++ + R LS E+++L+ ++ G+ +AE+L Sbjct: 119 VLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLC 178 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ HK N+ KLG +S A L+ A Sbjct: 179 ISHKTVEKHKANLKRKLGTASTAELVTFA 207 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 12/204 (5%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V L++ + G+ L + +G + ++++Q + + S Sbjct: 8 VLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLP-DVTVMDLSMPGMG- 65 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL + + ++ R L+ + + A + +L G ++K + + + + Sbjct: 66 --GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGA-RGYVAKTGSFDELVKAVVEV 122 Query: 131 LNGVRQATDRLNNQWYINQS-------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G + + + + LSP E E+ R + G + +IAE LK + KT Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207 + + V KLG+S+ ++ A Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFA 206 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 119 bits (299), Expect = 7e-26, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 22/214 (10%) Query: 13 LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF-----QDAMSRISFAAVIFSFSAMR 67 L++ + GI L + G +E + ++ S Sbjct: 2 LVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLPG 61 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G+ ++ + R L+++ + E ++ S+ +L +S+ E+ Sbjct: 62 M---SGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIR 118 Query: 128 FLS--------------LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 ++ L+G Q + + + LS E+EIL+F+ G S +I Sbjct: 119 TIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREI 178 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 AE+L+ +++T+ H+ N+M +L V + A L+ A Sbjct: 179 AEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMA 212 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas... 247 1e-64 UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa... 241 2e-62 UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=... 237 2e-61 UniRef50_C7MN84 Response regulator containing a CheY-like receiv... 237 2e-61 UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC... 235 6e-61 UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa... 235 8e-61 UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa... 235 1e-60 UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut... 234 2e-60 UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa... 234 3e-60 UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa... 232 6e-60 UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa... 231 2e-59 UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa... 230 2e-59 UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa... 230 3e-59 UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora... 229 6e-59 UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa... 229 7e-59 UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni... 229 8e-59 UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa... 228 1e-58 UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ... 227 2e-58 UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ... 227 2e-58 UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti... 227 3e-58 UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa... 227 3e-58 UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=... 226 4e-58 UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci... 225 7e-58 UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa... 225 1e-57 UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa... 224 1e-57 UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa... 224 1e-57 UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_B8G137 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa... 224 2e-57 UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=... 224 2e-57 UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus... 224 3e-57 UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa... 223 4e-57 UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele... 222 6e-57 UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece... 222 6e-57 UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa... 222 7e-57 UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa... 222 8e-57 UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon... 222 8e-57 UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92... 222 8e-57 UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa... 222 9e-57 UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa... 222 1e-56 UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr... 221 1e-56 UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=... 221 1e-56 UniRef50_A4CN07 Response regulator containing a CheY-like receiv... 221 2e-56 UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri... 220 2e-56 UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_C1A9U5 NarL family two-component response regulator n=1... 220 2e-56 UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_A5G586 Two component transcriptional regulator, LuxR fa... 220 2e-56 UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa... 220 3e-56 UniRef50_O07528 Uncharacterized transcriptional regulatory prote... 220 4e-56 UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa... 220 4e-56 UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa... 219 5e-56 UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC... 219 6e-56 UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi... 219 6e-56 UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl... 219 6e-56 UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ... 219 7e-56 UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa... 218 9e-56 UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib... 218 1e-55 UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa... 218 1e-55 UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa... 218 1e-55 UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium... 218 1e-55 UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac... 217 2e-55 UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa... 217 2e-55 UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla... 217 2e-55 UniRef50_A4VZN8 Response regulator containing a CheY-like receiv... 217 2e-55 UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=... 217 3e-55 UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=... 217 3e-55 UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa... 217 3e-55 UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T... 217 3e-55 UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac... 216 4e-55 UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa... 216 4e-55 UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ... 216 5e-55 UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_UPI0001C314AF two component transcriptional regulator, ... 216 5e-55 UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa... 216 5e-55 UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta... 215 6e-55 UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv... 215 6e-55 UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax... 215 7e-55 UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa... 215 8e-55 UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa... 215 8e-55 UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa... 215 8e-55 UniRef50_Q04VJ6 Receiver component of a two-component response r... 215 1e-54 UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot... 215 1e-54 UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa... 215 1e-54 UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa... 214 1e-54 UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding... 214 1e-54 UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re... 214 2e-54 UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_C4XNR8 NarL family two-component response regulator n=1... 214 2e-54 UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa... 214 2e-54 UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip... 214 2e-54 UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T... 214 3e-54 UniRef50_C1TQ52 Response regulator containing a CheY-like receiv... 213 3e-54 UniRef50_C4XMF2 NarL family two-component response regulator n=1... 213 3e-54 UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa... 213 3e-54 UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa... 213 4e-54 UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t... 213 4e-54 UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T... 213 4e-54 UniRef50_A1K960 Probable transcriptional regulator, LuxR family ... 213 4e-54 UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba... 213 4e-54 UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa... 213 4e-54 UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ... 213 4e-54 UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa... 212 6e-54 UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa... 212 6e-54 UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa... 212 6e-54 UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa... 212 7e-54 UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa... 212 9e-54 UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides... 212 9e-54 UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa... 212 1e-53 UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax... 211 1e-53 UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa... 211 1e-53 UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa... 211 2e-53 UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ... 210 2e-53 UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa... 210 2e-53 UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1... 210 3e-53 UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ... 210 3e-53 UniRef50_A5V148 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro... 210 4e-53 UniRef50_UPI0001B502C9 two component LuxR family transcriptional... 210 4e-53 UniRef50_C1A5E6 NarL family two-component response regulator n=1... 210 4e-53 UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa... 210 4e-53 UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa... 210 4e-53 UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa... 209 4e-53 UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa... 209 5e-53 UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact... 209 5e-53 UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit... 209 6e-53 UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto... 209 6e-53 UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=... 209 6e-53 UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob... 209 6e-53 UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ... 209 7e-53 UniRef50_B4D808 Two component transcriptional regulator, LuxR fa... 209 7e-53 UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa... 209 8e-53 UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa... 209 8e-53 UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa... 209 8e-53 UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa... 209 9e-53 UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ... 208 9e-53 UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa... 208 9e-53 UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI... 208 1e-52 UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv... 208 1e-52 UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh... 208 1e-52 UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc... 208 1e-52 UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa... 208 1e-52 UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa... 208 2e-52 UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=... 207 2e-52 UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_C4DI56 Response regulator containing a CheY-like receiv... 207 2e-52 UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_B3RA82 Response regulator protein; Response regulator r... 207 2e-52 UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa... 207 2e-52 UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa... 207 3e-52 UniRef50_UPI00017452CB response regulator with a HTH DNA-binding... 207 3e-52 UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop... 207 3e-52 UniRef50_A1RC88 Two-component system response regulator n=8 Tax=... 207 3e-52 UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa... 207 3e-52 UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa... 206 5e-52 UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa... 206 5e-52 UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob... 206 5e-52 UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy... 206 5e-52 UniRef50_A0NNP3 Response regulator containing a CheY-like receiv... 206 6e-52 UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa... 205 6e-52 UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa... 205 7e-52 UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc... 205 7e-52 UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax... 205 8e-52 UniRef50_C6VXD5 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa... 205 8e-52 UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa... 205 9e-52 UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M... 205 9e-52 UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa... 205 9e-52 UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa... 205 1e-51 UniRef50_C1TL62 Response regulator containing a CheY-like receiv... 205 1e-51 UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa... 205 1e-51 UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot... 205 1e-51 UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa... 205 1e-51 UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa... 205 1e-51 UniRef50_C6C961 Two component transcriptional regulator, LuxR fa... 204 1e-51 UniRef50_C7MRK0 Response regulator containing a CheY-like receiv... 204 2e-51 UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece... 204 2e-51 UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit... 204 2e-51 UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa... 204 2e-51 UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic... 204 2e-51 UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli... 204 2e-51 UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv... 204 2e-51 UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta... 204 2e-51 UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba... 204 3e-51 UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus... 203 3e-51 UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa... 203 3e-51 UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa... 203 3e-51 UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa... 203 4e-51 UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta... 203 4e-51 UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa... 203 4e-51 UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n... 203 4e-51 UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T... 203 5e-51 UniRef50_C1SMK1 Response regulator containing a CheY-like receiv... 202 5e-51 UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa... 202 5e-51 UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa... 202 6e-51 UniRef50_C4DCK3 Response regulator containing a CheY-like receiv... 202 6e-51 UniRef50_B4CVL8 Two component transcriptional regulator, LuxR fa... 202 7e-51 UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa... 202 7e-51 UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa... 202 7e-51 UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa... 202 7e-51 UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID... 202 8e-51 UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR fa... 202 8e-51 UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act... 202 1e-50 UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa... 202 1e-50 UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa... 202 1e-50 UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa... 201 1e-50 Sequences not found previously or not previously below threshold: UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac... 211 1e-53 UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa... 210 3e-53 UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa... 209 4e-53 UniRef50_P55184 Uncharacterized transcriptional regulatory prote... 209 6e-53 UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa... 209 6e-53 UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ... 209 7e-53 UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri... 206 4e-52 UniRef50_A3Y699 Putative two component system response regulator... 205 6e-52 UniRef50_UPI00018507A5 two component LuxR family transcriptional... 205 7e-52 UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T... 204 2e-51 UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa... 204 3e-51 UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact... 202 6e-51 UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa... 202 8e-51 UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel... 202 8e-51 UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V... 202 9e-51 UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa... 202 1e-50 >UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFU8_DESAH Length = 219 Score = 247 bits (633), Expect = 1e-64, Method: Composition-based stats. Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 18/223 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K V + E + G+ SL +E+ + ++ V+ S Sbjct: 1 MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREA-IKMVEELAPDVVLMDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ +L K+P + L+++ E + +L G L K S + Sbjct: 60 PE---LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGA-SGYLIKRSAPTDLIK 115 Query: 126 ELFLSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQ 172 + + G + ++ + LS ERE+L+ ++ G++ + Sbjct: 116 AIHAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANRE 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 IA L + KT+ AH+ ++ KLG++ A L + A + Sbjct: 176 IAGHLYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218 >UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q01NJ8_SOLUE Length = 224 Score = 241 bits (615), Expect = 2e-62, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 18/227 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K + L + + G+ +L A + ++ V+ Sbjct: 1 MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAA-NAMDAVALAQQLRPDVVLMDIGM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + + P + + ++ D E L + +G + K S + Sbjct: 60 AGMSS---FEATRLIRKERPEVKVIFLSMYDDEDYLAECV-DMGANGYILKDSPADQLIT 115 Query: 126 ELFLSLNGVRQATDRLNNQWYIN-------------QSRTLSPTEREILRFMSRGYSMTQ 172 + G + RL ++ + + TL+ EREIL+ ++ G S+ + Sbjct: 116 AIREVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKE 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 IA + ++KT+ AHKFN+M KL + + A L++ A +R ET+ Sbjct: 176 IAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222 >UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L0H3_THERP Length = 245 Score = 237 bits (607), Expect = 2e-61, Method: Composition-based stats. Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 24/236 (10%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + N+ +++ + GI + E+ + A +S ++ S Sbjct: 1 MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLA-DELSPDVILVDLSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL L + P+ +++ + +L ++ +K E Sbjct: 60 PGM---NGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGA-SAYCTKDIEPEQLID 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQ-------------------SRTLSPTEREILRFMSR 166 + G + + ++ ++ L+P E EIL ++R Sbjct: 116 VITRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVAR 175 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVL 222 GYS +IA+ L + +T++ H +++ KL V+ + A ++ +T + L Sbjct: 176 GYSNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLEDTEDSL 231 >UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Coriobacteriaceae RepID=C7MN84_CRYCD Length = 215 Score = 237 bits (606), Expect = 2e-61, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 15/210 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +VA+ + + G + +E++ D ++R+ ++ S Sbjct: 2 IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAY-DLVARVEPHVLLLDISMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL ++ FP TR +++ + L +L G + K S+ E+ + Sbjct: 59 PGENGLIACERISCDFPSTRIIILTMFEETDYLFYTLR-GGAAGYVLKNSSTEVLLGAIR 117 Query: 129 LSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 G + N LS E EI +++GY+ + A++L Sbjct: 118 KVATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKL 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++KT+ H+ + +KLGV+S A L+ A Sbjct: 178 FISVKTVETHRSKIYAKLGVNSRAELVHLA 207 >UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30 Tax=Bacillales RepID=B7GL14_ANOFW Length = 260 Score = 235 bits (602), Expect = 6e-61, Method: Composition-based stats. Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + LI+ + GI+ + E+ + R VI + Sbjct: 36 KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEAL-ALVERYKPDVVIMDINMP- 93 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G+ +L +P T+ ++++ D E+ ++ +L + G L K + + + Sbjct: 94 --HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAM-GYLLKEMDADALIEAV 150 Query: 128 FLSLNGVRQATDRL---------------------NNQWYINQSRTLSPTEREILRFMSR 166 + G ++ NQ L+ E E+L+ ++ Sbjct: 151 RVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLAD 210 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 G S IA+ L + KT++ H N++ KL V+ + A + Sbjct: 211 GKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258 >UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37 Tax=Bacteria RepID=D1AEE5_THECD Length = 244 Score = 235 bits (601), Expect = 8e-61, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 18/224 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAAVIF 61 K + L + + G+ + E+ + R + Sbjct: 25 PAKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 + R GL EL+ +PR R L++ D E L +L G + K+ Sbjct: 85 DVAMPRM---TGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAA-GYVLKSLADR 140 Query: 122 IFHQELFLSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171 Q ++ G + L+P E EIL+ ++ G+S Sbjct: 141 DLVQACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSR 200 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +IA+ L ++KT+ H+ N+++KLG+ L A + Sbjct: 201 EIADTLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIEP 244 >UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3 Tax=Clostridia RepID=Q2RJU9_MOOTA Length = 222 Score = 235 bits (600), Expect = 1e-60, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 16/221 (7%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 + I+K + + + + GI + T QE+ + R +I Sbjct: 1 MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEA-IEMTRRYQPQVIIMD 59 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 + G+ + ++P+ L + D E +I L + G + K + E Sbjct: 60 INMPG---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSG-VSGYVLKDISAEE 115 Query: 123 FHQELFLSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMT 171 Q ++ G R + + S L+ EREIL +S G S Sbjct: 116 LVQAVYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNR 175 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 +IA +L + KT++ H ++ K+GVS A Sbjct: 176 EIARELFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216 >UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ Length = 218 Score = 234 bits (599), Expect = 2e-60, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 19/222 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G + E++Q + +I S Sbjct: 1 MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEH-RPDVLILDLSMP-- 57 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL ++++ FP T+ L++ D E L L G + K S E + Sbjct: 58 PGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGA-KGYILKNSPDEQLILAVR 116 Query: 129 LSLNGVRQATDRLNNQW---------------YINQSRTLSPTEREILRFMSRGYSMTQI 173 G +L + + LS E EIL +++GY I Sbjct: 117 TVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDI 176 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 AE+L ++KT+ AHK ++M+KL + S L+E A + Sbjct: 177 AEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF 218 >UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiaceae RepID=Q1LEP5_RALME Length = 214 Score = 234 bits (597), Expect = 3e-60, Method: Composition-based stats. Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 12/211 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ + + + E + +S ++ S Sbjct: 2 IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTE-VPQLVRELSPHVILLDLSMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R GL + +L P R LV+ E ++ + G L+K S + L Sbjct: 60 --RNGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAA-GYLTKESAATELVEALR 116 Query: 129 LSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + + + LS E E+ R + G S+TQIA L + Sbjct: 117 KVAAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSA 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 KT+ +K +M KL + SDA L+ A Sbjct: 177 KTVSTYKMRLMEKLQLRSDAALVRYAIEARL 207 >UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01NC6_SOLUE Length = 216 Score = 232 bits (593), Expect = 6e-60, Method: Composition-based stats. Identities = 32/221 (14%), Positives = 80/221 (36%), Gaps = 17/221 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K + L + + G+ L G +++ A V+ + Sbjct: 1 MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHT-PDVVVMDVAM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ +++ K P T + ++ E+ ++ +L +L ++ + Sbjct: 60 PG---LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHD-LIA 115 Query: 126 ELFLSLNGVRQATD------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + G + ++ + + L+ ERE+L+ ++ G + ++ Sbjct: 116 AVIAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEV 175 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 A L ++ T+ H+ N++ KL + S A L+ A + Sbjct: 176 AAILNLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216 >UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=Q1J0X7_DEIGD Length = 228 Score = 231 bits (590), Expect = 2e-59, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 14/220 (6%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + L++ + G L A + +E+ A ++ ++ S Sbjct: 11 HTRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKA-RQLMPDVILMDVS 69 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 G+ + + P LV+ D +A + L G L K ++ + Sbjct: 70 MPGM---NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAA-GYLLKNASEDELL 125 Query: 125 QELFLSLNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + G + +Q LSP E E+LR + G + +IA Sbjct: 126 GAVRAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIAR 185 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L + +T++ H N+ SKLGV S + + Sbjct: 186 DLDISPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWIDP 225 >UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2 Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD Length = 224 Score = 230 bits (589), Expect = 2e-59, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 84/217 (38%), Gaps = 10/217 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + V +++ + G+ + AG +++ + A+ + ++ Sbjct: 1 MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAV-KDRPDVMLMDVHM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + +G++ L P+ R +++ D + L + G++ K Sbjct: 60 P--QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAG-VSGIVFKHDDSSEIVA 116 Query: 126 ELFLSLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G + R + + LSP E E+L +++GY+ ++A+ L Sbjct: 117 AIQHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 ++KT+ H+ ++M ++G+ S A L+ A + Sbjct: 177 SVKTVETHRQHIMRRIGLHSRAALVRYAYQNGLVDPP 213 >UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=Q2RMH6_MOOTA Length = 221 Score = 230 bits (588), Expect = 3e-59, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 17/222 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G+ +L + T + V+ Sbjct: 3 IRVMLVDDHALVREGLRALLEREGDIEVVGETGS-AAGVLALAEESRPEVVVMDLQL--G 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R G+ EL K P + ++++ D E + +L G + K + +E + Sbjct: 60 AGRNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGA-RGYVLKRAGIEELTTAIR 118 Query: 129 LSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 L G ++ + + L+ E E+LR + G + +IA Sbjct: 119 LVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIAR 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 +L ++KT++AH+ N+M KLG+ L++ A ++ Sbjct: 179 RLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLDS 220 >UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str. D14 RepID=C6J7D2_9BACL Length = 227 Score = 229 bits (585), Expect = 6e-59, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 15/224 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA---MSRISFAAV 59 R+ K V +++ M +G+++ + G +E+ + + + Sbjct: 7 EPRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDII 66 Query: 60 IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 + G E+ +FP + +++ + ++ ++ + VL K + Sbjct: 67 LMDLMMPGM---NGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVL-KTVS 122 Query: 120 LEIFHQELFLSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171 E L + G + T L + ++ E+E+L ++ G S Sbjct: 123 AEELIYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNK 182 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 IAE+L +IKT++ H N++ K + L A + H Sbjct: 183 DIAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWVGH 226 >UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35 Tax=Actinomycetales RepID=A0LVS2_ACIC1 Length = 303 Score = 229 bits (584), Expect = 7e-59, Method: Composition-based stats. Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 19/221 (8%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 V + + + G+E + R+ E+ A + V+ Sbjct: 86 PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETL-PDVVLLDVRMP- 143 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +R G+ + P + +++ D EA L ++ + G L K +++ + Sbjct: 144 --KRTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAM-GYLLKEISIDEVAAAI 200 Query: 128 FLSLNGVRQATDRLNNQWYIN--------------QSRTLSPTEREILRFMSRGYSMTQI 173 G + + ++ + L+ E E+LR +++G + I Sbjct: 201 RAVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDI 260 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 A+QL + T++ H N++ KL + S + A + Sbjct: 261 AKQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301 >UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VH7_CYTH3 Length = 220 Score = 229 bits (584), Expect = 8e-59, Method: Composition-based stats. Identities = 43/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK N+ L++ + GI++ + + +A+ ++ VI + Sbjct: 1 MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDG-IEAVKQLKPDVVIMDITM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ ++ K+P ++ L+++ D E ++ S+ G L K + F + Sbjct: 60 PEM---SGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAY-GYLLKDVDKDEFIK 115 Query: 126 ELFLSLNGVRQATDRLN-----------------NQWYINQSRTLSPTEREILRFMSRGY 168 + NG + ++ Y N L+ E+ IL+ ++ G Sbjct: 116 AITAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGK 175 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + +IA+ L +I+TI H+ N+M KL V + L+ A Sbjct: 176 NNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIAID 216 >UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM Length = 216 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 14/218 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK V +++ + G+ + ++ V+ S Sbjct: 1 MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGG-IAMAQKMRPDVVLLDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL CL L P R +++ + + + + VL KA+ ++ +Q Sbjct: 60 PEM---SGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAAD-DVLYQ 115 Query: 126 ELFLSLNGVRQATDRLNNQ---------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + +G + + + LS E+++L ++ GY+ +IAEQ Sbjct: 116 AVRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQ 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 L ++KT+ +K+ +M KL + L++ A + Sbjct: 176 LVISVKTVETYKYRIMEKLNCKKRSDLVKFALDNGLLA 213 >UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT Length = 220 Score = 228 bits (583), Expect = 1e-58, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 89/222 (40%), Gaps = 18/222 (8%) Query: 6 IKKR-NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + V L+E + G+++L + + +A R++ V+ + Sbjct: 1 MTQTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGR-AAVEAAERLAPDVVVMDIN 59 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 + +G+ E+ K R L+++ D E + ++ G L K S L Sbjct: 60 MP---KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGA-SGYLLKGSGLSDLV 115 Query: 125 QELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQ 172 + G + + + + + +L+ ERE+L + G S + Sbjct: 116 TAIREVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPE 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 IA+ L ++KTI H+ +M+KLGV + AGL+ A + + Sbjct: 176 IAKILGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVS 217 >UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria RepID=Q3Z7M1_DEHE1 Length = 232 Score = 227 bits (581), Expect = 2e-58, Method: Composition-based stats. Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 17/219 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 ++ L + + G+++L A E+ + + + ++ Sbjct: 2 ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEA-VNLVESLQPGVLVTDLMMGGM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ ++ + P+T ++++ EA + +L VL K ST E + + Sbjct: 61 ---SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVL-KDSTSEELVRSVR 116 Query: 129 LSLNGVRQATDRLNNQWYI------------NQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 ++ G R + L+ + + TL+ ERE+L +++G++ +IAE+ Sbjct: 117 EAVQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAER 176 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L + +T+ H+ N+M KL + + LL A + Sbjct: 177 LFISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPP 215 >UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=B9L1R6_THERP Length = 221 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 45/226 (19%), Positives = 78/226 (34%), Gaps = 18/226 (7%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 K V L + + +G+ +L T + + + + S Sbjct: 2 TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGT-ADEAVELARTLQPDVAVLDIS 60 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 GL L +A TR L++ E L+ L G + K+S Sbjct: 61 MPG----NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGG-SGYVRKSSLHTDLV 115 Query: 125 QELFLSLNGVRQATDRLNNQWYI------------NQSRTLSPTEREILRFMSRGYSMTQ 172 + + L G + ++ LS ERE+LR + GY+ + Sbjct: 116 EAIRLVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQE 175 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218 IA+QL + KT+ ++ VM KLG S + L+ A + + Sbjct: 176 IADQLFLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQAE 221 >UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6 Tax=Bacteria RepID=B1Y743_LEPCP Length = 211 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 13/208 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G++ L A + E D R ++ + + Sbjct: 3 MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHE-VIDQCGRFAWDVAVLDYRMPGK 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + EL +FP LV++ + + L G L+K S E + Sbjct: 62 G---GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAA-GYLTKESAPEDLVNAIR 117 Query: 129 LSLNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G R + L Q ++ S LS E +I+ ++ G + +IA+QL + Sbjct: 118 KVARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAAD 208 TI ++ ++ KL + S+A L+ A Sbjct: 178 PNTISTYRKRILEKLDLKSNAELMRYAI 205 >UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales RepID=D2BDI1_STRRD Length = 227 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 13/219 (5%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 S + V L++ + G+ +L + G E + ++ V+ Sbjct: 12 SESIGEPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDG-EEAIALVLSLNPDVVVM 70 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 G+ L + P LV+ + +A + +L G + K + Sbjct: 71 DLVMPG---VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGA-RGYVLKGADGN 126 Query: 122 IFHQELFLSLNGVRQATDRLNNQ--------WYINQSRTLSPTEREILRFMSRGYSMTQI 173 F + G + + L+ EREIL ++ G S +I Sbjct: 127 DFIAAVRAVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEI 186 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 A +L + KT++ H ++ +KL V+ + A Sbjct: 187 ARRLFLSQKTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225 >UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14 Tax=Clostridia RepID=A8MF72_ALKOO Length = 224 Score = 227 bits (579), Expect = 3e-58, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 76/218 (34%), Gaps = 17/218 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 +KK NV + + + G++ + +E+ ++S V+ Sbjct: 6 KSVKKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKT-QQLSPDVVLLDI 64 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 S ++ G+ L L + +++ + L +++ +G + K + E Sbjct: 65 SMP---KQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGA-NGYVLKDAESESL 120 Query: 124 HQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMT 171 + + G+ L + N L+ E E+L ++ G + Sbjct: 121 IKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNK 180 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +I + L + KT++ H N+ K+ V+ A Sbjct: 181 EIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYAYK 218 >UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia (class) RepID=B9L2G4_THERP Length = 246 Score = 226 bits (578), Expect = 4e-58, Method: Composition-based stats. Identities = 31/220 (14%), Positives = 76/220 (34%), Gaps = 15/220 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 ++ V +++ + G+ L Q++ ++ + V+ + Sbjct: 26 RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDAL-KMVAELQPDVVLMDINMP 84 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 +G+ + ++ L++ D E ++ ++ ++ K S E + Sbjct: 85 GM---DGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLV-KNSKPEELLRA 140 Query: 127 LFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + ++ G L + + LS E +LR +++GY+ QIA+ Sbjct: 141 IHVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADA 200 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 L T++ + + KLGV + A + Sbjct: 201 LNLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRP 240 >UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus selenitireducens MLS10 RepID=A8VTE0_9BACI Length = 219 Score = 225 bits (576), Expect = 7e-58, Method: Composition-based stats. Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 18/221 (8%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L++ + G++ + A ES + + + +I S Sbjct: 2 KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEA-DDGESAIEMAAEANPDIIIMDISMPG 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +G+ E+ K P R L++ EA L SL G + K + + Sbjct: 61 ---LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGA-SGYVLKRAVDTELVHAV 116 Query: 128 FLSLNGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIA 174 L +NG L + Y NQ+ LS E+E+L++++ GY+ +I+ Sbjct: 117 KLVMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEIS 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +L +IKT+ +K VM K+G + L+ A + H Sbjct: 177 TELFISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNIINH 217 >UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29 Tax=Alphaproteobacteria RepID=Q1GIA7_SILST Length = 233 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 8/209 (3%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 V +++ M + GI+S+ + + +E+ A + ++ + Sbjct: 23 PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARA-EALVPDVILMDLNMP- 80 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 GLS + + P R L+++ D + +LS + G + K E + Sbjct: 81 --DVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAV-GYVLKDVQPEEIKTAI 137 Query: 128 FLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + G + L+ E+ IL +++G S ++A+ L +++T+ Sbjct: 138 DAVMRGEQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213 H+ N+ KLG+SS AGL A + Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVL 226 >UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FDP3_DESAA Length = 219 Score = 225 bits (574), Expect = 1e-57, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 16/218 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + + E + G++SL + + + + + ++ S Sbjct: 4 STIKILITEDHALVRKGLKSLISSRSEFQVVGEA-DNGLAAIEMTRKCKPDLILLDLSMP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + GL+ + +L + P + LVI + LI +L DG L K + Sbjct: 63 ---KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGA-DGYLLKGDDPQELFMA 118 Query: 127 LFLSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + ++G + L+ + + +L+ E+E+ + ++ G + QIA+ Sbjct: 119 IRAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIAD 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 L + KT+ H+ N+M KL + S + A + Sbjct: 179 LLFISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216 >UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4 Tax=Streptomyces RepID=D1XHI5_9ACTO Length = 222 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 21/224 (9%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71 + + + GI L G E+ ++ + V+ R Sbjct: 2 VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEA-VALVAEKAPDVVLMDLRMPR---C 57 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 +G+ + + PRT+ +V+ + L +L G L+K + E Q + + Sbjct: 58 DGVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGA-RGYLTKDARGEEIVQAIDAVM 116 Query: 132 NGVRQATDRLNNQW----------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175 +G + ++ + L+P E E+L ++ G S +IA Sbjct: 117 SGEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIAR 176 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 L + T++ H N+ +K G + A R TS Sbjct: 177 ALHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPRTS 220 >UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12 Tax=Cyanobacteria RepID=B2J2N1_NOSP7 Length = 232 Score = 224 bits (573), Expect = 1e-57, Method: Composition-based stats. Identities = 33/228 (14%), Positives = 86/228 (37%), Gaps = 19/228 (8%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M++ + + +++ + G++++ + + + + ++ + V+ Sbjct: 1 MKNDKSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDA-ENGKVALELVAELQPDVVL 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 +G + + FP + LV++ D ++ L G++ G L K Sbjct: 60 MDIRMPEM---DGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGA-KGYLLKDMPS 115 Query: 121 EIFHQELFLSLNGVRQATDRL--------------NNQWYINQSRTLSPTEREILRFMSR 166 + +G Q L N ++ ++ E+E+L + Sbjct: 116 SELADAIRFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGV 175 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 G + +IA+QL T++ H +++S+L + + + L A+ +L Sbjct: 176 GATNREIAQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYANSVLNQE 223 >UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD Length = 222 Score = 224 bits (573), Expect = 2e-57, Method: Composition-based stats. Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 15/218 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + +++ + G+ +F G ++ A V+ Sbjct: 10 SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESG-PDVVLMDLRMP 68 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ + L ++ P R LV+ D E+ ++ ++ G L K + E + Sbjct: 69 TMG---GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGAT-GYLLKDAPREDLIRA 124 Query: 127 LFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + + G + + L+ E E+LR ++ G + + A + Sbjct: 125 VRAAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARK 184 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 L + T++ H + +K GV A + A ++ Sbjct: 185 LFISEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222 >UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3 Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD Length = 217 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 45/220 (20%), Positives = 80/220 (36%), Gaps = 18/220 (8%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 KK + L + + G++ L E D + + V+ + Sbjct: 3 KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDG-EEAIDRVDDLHPDLVLLDLTMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + G+ C+ EL K + LV+ D E L L VL KA+ +E+ Sbjct: 62 ---KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELL-SA 117 Query: 127 LFLSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQI 173 + G + + + + LS E E+LR ++ G++ I Sbjct: 118 IRTVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDI 177 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 A+ L ++KT+ +K VM KL + A L+ A + Sbjct: 178 ADLLHVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217 >UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1 Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD Length = 212 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 42/215 (19%), Positives = 76/215 (35%), Gaps = 15/215 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + + G+ SL K A E+ + A+ + S Sbjct: 2 IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALE-TRPQVAVIDISMPE- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + + K P + LV+ + + +I + G L K S E + Sbjct: 60 --LNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGA-SGYLLKDSASEELIDAVK 116 Query: 129 LSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + + + + + + L+ ERE+ + G + IA L Sbjct: 117 ALATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLD 176 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 ++KT H+ V+ KLGVS+ A L+ A + Sbjct: 177 ISVKTAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211 >UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3 Tax=Proteobacteria RepID=Q313W8_DESDG Length = 223 Score = 224 bits (572), Expect = 2e-57, Method: Composition-based stats. Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 17/223 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 ++ + E + G++SL + + D R V+ S R Sbjct: 6 SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDG-QMAVDLCDRNQPELVLMDISMPRM- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ + + P R LV+ + +L+ DG + K ++ + F + Sbjct: 64 --DGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGA-DGYVLKDASNDEFILAVES 120 Query: 130 SLNGVRQATD------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 L G + Q + TL+P E+EI + ++ GY +IAE L Sbjct: 121 VLGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEML 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 ++KT+ H+ N+M KLGV S A L A + + Sbjct: 181 VVSVKTVEKHRSNLMQKLGVHSAAELRALALERGIILRMRSDG 223 >UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5 Tax=Bacteria RepID=B1ZVM0_OPITP Length = 219 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 16/220 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + L + + GI +L K G +E+ + + I + Sbjct: 2 PAPLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRET-VTLVHTFAPDIAIMDITM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G +A + PRT+ L+++ E ++ +L G L K + Sbjct: 61 PG---LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGAT-GYLLKDAATAELQL 116 Query: 126 ELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 L G + ++ ++ L+P REI++ ++ G S +IA Sbjct: 117 ALNAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 L ++KTI H+ ++M++LG+ AG++ A + Sbjct: 177 FLLNLSVKTIETHRMHLMARLGLHDVAGVVRYALRTGLIS 216 >UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA Length = 212 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 80/216 (37%), Gaps = 14/216 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + V+ G+ + + +E+ + + S Sbjct: 2 IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHC-PDVAVVDISMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL ++ L + P L++ + E ++ ++ + + K++ E + Sbjct: 60 --IDGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAP-EQLVTAIR 116 Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +G R T+ + +LS E ++LR ++ G++ +IA+ Sbjct: 117 KLHSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 ++KT+ ++ ++ KL + ++A + A + Sbjct: 177 SVKTVDTYRARLLKKLNLRNNADISRFAIQNNLINP 212 >UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria RepID=A5F1Q5_VIBC3 Length = 216 Score = 224 bits (571), Expect = 2e-57, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 12/221 (5%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 ME K V +++ + G + + E+ + + V+ Sbjct: 1 MEVFMDKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEAL-ELVKLHQPDVVL 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S G+ + + P T+ L++ D ++ + + +L + S L Sbjct: 60 MDVSMP---IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISAL 116 Query: 121 EIFHQELFLSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQI 173 + Q + G + + N+ LS E ILR +++G S +I Sbjct: 117 K-MVQAIKTVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKI 175 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 A L + +T+ H+ N+ KL + S A L + A + Sbjct: 176 ATLLNISYRTVETHRQNIKHKLDIHSTAELAQYALQHGLLE 216 >UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH Length = 216 Score = 224 bits (571), Expect = 3e-57, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 14/218 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K + +++ I S+ + + + + + ++ + Sbjct: 3 KMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSG-DGVLEKVEACRPDCILMDINLP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + G+ + +P R LV + + L+ +L DG L K S+ E Sbjct: 62 G---KNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGA-DGYLLKDSSSEQVVAA 117 Query: 127 LFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + + G R+ + + L+ E+EIL + +G S +IAE L Sbjct: 118 IRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEAL 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + KT++ H + KL V S + + A + Sbjct: 178 YISDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPL 215 >UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH Length = 211 Score = 223 bits (569), Expect = 4e-57, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 10/215 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K V + + + GI L + E+ + V+ + Sbjct: 1 MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHF-PDLVLLDLNM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R G++ + ++ P + L++ D E + + +G + K E + Sbjct: 60 PRMG---GITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGA-EGYIQKDVKPEELKR 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-----TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + + G + N+ + LS E+E+L +++G S QIA++L + Sbjct: 116 AIDKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFIS 175 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 KT++ H N++ KL V+ + A + Sbjct: 176 EKTVKNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210 >UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LUT0_9FIRM Length = 216 Score = 222 bits (568), Expect = 6e-57, Method: Composition-based stats. Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 12/220 (5%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 ME+ + + + L + + G+ L +E+ + A ++ + Sbjct: 1 MENKK-EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKA-AKTPVDIAL 58 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S GL CL L P R L++ + L +G L K + Sbjct: 59 LDLSMPHMG---GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGA-NGYLCKDTLD 114 Query: 121 EIFHQELFLSLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIA 174 + L G R +R + LS ERE+L + GYS++ IA Sbjct: 115 AELFRALRTVAAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIA 174 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 ++L +IKT+ +K ++ KL + ++ L++ A + Sbjct: 175 DKLYLSIKTVSTYKTRLLQKLDCTQNSELVDYALRHNILG 214 >UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32 Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ Length = 231 Score = 222 bits (567), Expect = 6e-57, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 14/216 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAA 58 HS V LI+ + G+ Y + E+ + R Sbjct: 13 HSIDAPARVLLIDDHALVRDGMRMHLTLQPDL-YVVGEADGGEAALAWLERAGARERPDL 71 Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 VI G++ L ++P LV++ D ++ G + K + Sbjct: 72 VITDIGMRGMG---GIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGA-RGYVLKDA 127 Query: 119 TLEIFHQELFLSLNGVRQATDRLN-----NQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + + L G + R+ L+ ER+IL + RG + +I Sbjct: 128 PADELMAAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEI 187 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 A QL +++T+ H+ N+ KLG+ AGL++ A Sbjct: 188 ATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVE 223 >UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3 Tax=Chloroflexus RepID=B8GAC9_CHLAD Length = 213 Score = 222 bits (567), Expect = 7e-57, Method: Composition-based stats. Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 14/215 (6%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ L S+ + A + + ++ S Sbjct: 4 ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQA-TTLQPDLILLDLSL---TN 59 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 GL+ + L P+ R LV+ D E + +L+ G + K + + Sbjct: 60 SSGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGA-HGYVLKRAADAELIAAIRAV 118 Query: 131 LNGVRQATDRLNNQW---------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 L G L + N +LS ERE+L ++RGY+ +IA QL + Sbjct: 119 LRGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSP 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 KT+ ++ M KLG+ S A L++ A + Sbjct: 179 KTVETYRTRGMEKLGLRSRAALVQFALDHNLLVPP 213 >UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3 Length = 215 Score = 222 bits (566), Expect = 8e-57, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 16/219 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK ++ + + + GI+SL + + + + V+ + Sbjct: 2 MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDG-DELIQFIDTLDPEIVVLDITM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 ++ G+ +TE+ R + +V++ D ++ S+ L L K + E + Sbjct: 61 P---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALS-YLLKNTDHEEIIK 116 Query: 126 ELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIA 174 + G + + + + + TL+ E E+L+ +S G S IA Sbjct: 117 AVKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 ++L +++T+ H+ N+M KL V + A L++ A L + Sbjct: 177 DKLFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215 >UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales RepID=Q485W6_COLP3 Length = 215 Score = 222 bits (566), Expect = 8e-57, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 90/219 (41%), Gaps = 10/219 (4%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M + + +V +++ M G+++ + T ++ A+ + ++ Sbjct: 1 MSNLKELPVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIE-LKPDVIL 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S G+ + + P T+ L+++ + ++ + G L K +T Sbjct: 60 MDISMPTM---NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAV-GYLLKDTTS 115 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQ-----SRTLSPTEREILRFMSRGYSMTQIAE 175 E + + NG + + N S L+ E+ +L ++++G + +IA+ Sbjct: 116 EEIYYAIKAVANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAK 175 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 L + +T+ AH+ N+ +KLG+ S A L+ A ++ Sbjct: 176 ILNISFRTVEAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214 >UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92 Tax=Burkholderiales RepID=Q3JFS6_BURP1 Length = 282 Score = 222 bits (566), Expect = 8e-57, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 13/222 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 V + + + G+ + + +G + S + + ++ S Sbjct: 66 PPMIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATT-IALVRSTPAQVLVLDLSM 124 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R G+ + ++ + P R LV+ + + + G L+K S Sbjct: 125 PG---RNGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGA-SGYLTKESASSELVG 180 Query: 126 ELFLSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + +G + + ++ + LS E ++ R ++ G ++TQIA++L Sbjct: 181 AVTKVASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADEL 240 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 + KT+ +K ++ K+ + +A L+ A + + Sbjct: 241 CVSAKTVSTYKTRILEKMQMPHEAALVRYALRHKLIDDPDED 282 >UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XL75_9BACT Length = 234 Score = 222 bits (566), Expect = 9e-57, Method: Composition-based stats. Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 17/224 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 R K V L + + G+ S QE+ + +S V+ Sbjct: 14 KRKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSK-VRELSPEIVLMDL 72 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 GL + +FP + L+++ + ++ + G + K + L Sbjct: 73 DMPTM---SGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGA-QGYVLKDAPLTEL 128 Query: 124 HQELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMT 171 + + G + ++ S+ L+ E E+L ++ G S Sbjct: 129 VRAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNK 188 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 ++A ++ ++T+ H+ VM+KL + + AGL + A ++ Sbjct: 189 EMASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKL 232 >UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT Length = 220 Score = 222 bits (566), Expect = 1e-56, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 78/220 (35%), Gaps = 17/220 (7%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L + + G+ +L + + + ++ VI S Sbjct: 6 KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGR-AAVQFAEDLAPDIVILDLSMPE 64 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 GL +A PR+R L++ + E + +L + + G + K + Sbjct: 65 ---LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREAL-AAGVRGYILKTDAGRDLANAV 120 Query: 128 FLSLNGVRQATDRLN------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + G RL + L+P EREIL+ ++ G + + Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L ++KT H+ +M+KLG+ S A L+ A + Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLIAP 220 >UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria RepID=Q2LSF1_SYNAS Length = 217 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 16/214 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV L + + G+ +L Q++ + +I S Sbjct: 4 NVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKT-ITLARELHPEIIIMDISMP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ ++ P + + ++ +IG L G L K E + Sbjct: 60 DMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGA-SGYLLKDCAFEELVNAIQT 118 Query: 130 SLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 L+ + + + N S L+P ERE+L+ ++ G S QIA L Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 ++KT+ H+ N+ KLGV S A L++ A Sbjct: 179 VSVKTVETHRRNITQKLGVGSVAELIKYAIREGL 212 >UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C48EF Length = 220 Score = 221 bits (565), Expect = 1e-56, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 9/219 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + L + V+ G+ +L + E+ D + + S Sbjct: 1 MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTET-VDCVRATEPRVLCLDLSM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + +T + PRTR LV+ + A + +L+ L K + Sbjct: 60 PGWGSA---TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFL-KTTPSPDLLA 115 Query: 126 ELFLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G R L + LS E E+L + +G + +IA+QL ++ Sbjct: 116 AIRAVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSV 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 KT+ ++ + K G+ + A + + Sbjct: 176 KTVETYRARLREKTGLKTRADYVRYGLEAGLLGATPVEG 214 >UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CN07_9FLAO Length = 217 Score = 221 bits (564), Expect = 2e-56, Method: Composition-based stats. Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 12/219 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +AL++ + GI S+ + G E + + V+ Sbjct: 2 IRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVE-LLNLLKTTRADVVLTDIRMPGM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GLS ++ FP TR + + D E + L ++ K E Q + Sbjct: 61 ---DGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLV-KNVEKEELVQAIH 116 Query: 129 LSLNGVRQATDRLN-------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + + +Q +S L+ ER++L +++G + QIAE LK + Sbjct: 117 TVARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSR 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 TI H+ N+ K+G+ S+ GLL+AA L +T N Sbjct: 177 FTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215 >UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria RepID=C1F9F6_ACIC5 Length = 213 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 6/211 (2%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 + + +++ + G+ +L G E+ I Sbjct: 5 THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEA-IALHREHQPDITIMDL 63 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 R G+ +T + + P R +V+ D + + +L G L K + Sbjct: 64 RLPRM---NGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGA-RGYLLKGMDADDL 119 Query: 124 HQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G + + + L+ E ++LR + +G S +IA L + Sbjct: 120 TAAIRSVHAGKSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEA 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 T++ H N++SKLGVS A + Sbjct: 180 TVKTHINNLLSKLGVSDRTQAATTALQRGLV 210 >UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7 Tax=Verrucomicrobia RepID=B9XC41_9BACT Length = 267 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 + H + V L + + G+ +L T +E+ +++ ++ Sbjct: 23 LTHKSMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREA-VQMAQKLTPDVIL 81 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + GL ++A P + LV++ + + L+ + G L K + Sbjct: 82 MDIAMPLM---NGLEATRKIAEVAPSAKVLVLSSYGEDDYV-QKLTEAGASGYLIKHAAA 137 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGY 168 + + G + + + L+ E E L + G Sbjct: 138 NDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGK 197 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP 224 IA + +IKT+ H+ VM+KL + A L A + S + +P Sbjct: 198 PNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDANGQSLMPNP 253 >UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A9U5_GEMAT Length = 223 Score = 220 bits (563), Expect = 2e-56, Method: Composition-based stats. Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 15/219 (6%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 V + + + G+ + G + + A+ + V+ + Sbjct: 7 PTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHV-PDVVVLDIT 65 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 GL L P TR L+++ D + + G L K S E Sbjct: 66 MPEE---SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIG-THGYLLKDSAGEELR 121 Query: 125 QELFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIA 174 + G + + + Q L+P ER++L ++RG + IA Sbjct: 122 AAIRAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIA 181 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +L + +T+ AH+ ++M KL + S AGL A + Sbjct: 182 AELGISRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220 >UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1 Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD Length = 220 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 16/214 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ L G + ++ + + V+ Sbjct: 10 IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQA-VQLAAELQPDVVVMDLHMPGG 67 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + PR LV+ + + ++ G L K S E + + Sbjct: 68 ---NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGA-RGYLLKESGAEEIARAVR 123 Query: 129 LSLNGVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + + L+ ERE+L+ +++G S +IA+ L Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 + KT+R H N+ KL V+ A + A Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217 >UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8 Tax=Bacteria RepID=A5G586_GEOUR Length = 226 Score = 220 bits (562), Expect = 2e-56, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 16/215 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G++++ +E+ + A + V+ + Sbjct: 13 IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELL-PDVVVMDLTMPEM 71 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + ++ P R LV++ A ++ + G L K +E + Sbjct: 72 ---NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGAT-GYLLKDCAVEELVGAIH 127 Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 +G ++ + + LS ERE+L+ ++ G S +IA Sbjct: 128 TVASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTF 187 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 +IKT+ + +VM KL + + A L + A Sbjct: 188 GVSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGL 222 >UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RMN3_9PROT Length = 213 Score = 220 bits (561), Expect = 3e-56, Method: Composition-based stats. Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 12/208 (5%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +K + L++ + G+ L + + E + + F + Sbjct: 4 RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEA-ENAEQAISMIRQNEFDVALVDIGLP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL L ++ + PR L+++ E + +L G L+K S Sbjct: 63 GKG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGA-SGYLTKNSPPGTLLAA 118 Query: 127 LFLSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G R + L Q + S LS E E+LR ++ G S+TQIAE L Sbjct: 119 IRKVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHL 178 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 + KT+ ++ ++ K G+ S+A L A Sbjct: 179 SPKTVTTYRARIVEKTGLHSNAELTRYA 206 >UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3 Tax=Bacillus RepID=YHCZ_BACSU Length = 214 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 16/211 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G+ F T E+ + + V+ S Sbjct: 1 MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALR-VIEETKPDLVLMDLSMPEM 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ + + +FP T +V+ + +I +L L E+ Sbjct: 60 ---DGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT--R 114 Query: 129 LSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + + + + + L+ E+++L ++ G S +IA L Sbjct: 115 QVHGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALF 174 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + KT++ H N+++KL V+ A Sbjct: 175 ISEKTVKTHVSNLLAKLEVADRTQAALFAVK 205 >UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1 Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT Length = 229 Score = 220 bits (561), Expect = 4e-56, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 16/219 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 S K + L++ M G+ + + ++ + + V+ Sbjct: 8 SPAKATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQAL-ELVKSEKPDLVLADI 66 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 + + GL L +L + P+ LVI+ D L G + K + Sbjct: 67 TLP---DKNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGG-RGYIMKHEGGKKI 122 Query: 124 HQELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQ 172 Q + L+G +++++ + + L+ E E+ R + G S + Sbjct: 123 MQAIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKE 182 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 IA + + KT+ H+ N+ +KLG+ + A L+ + Sbjct: 183 IAANMHVSAKTVEVHRMNIKTKLGLKTAAELIRYTVRWV 221 >UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7 Tax=Bacteria RepID=B1M5J4_METRJ Length = 222 Score = 219 bits (560), Expect = 5e-56, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 17/216 (7%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + VAL + + GI +L + E+ + + S Sbjct: 4 RIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEAL-PMIHAADPDVAVVDVSMPG 62 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 GL +A PRTR LV+ + A + L G L K S E + + Sbjct: 63 ---LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGA-RGYLLKRSAAEDLLRAV 118 Query: 128 FLSLNGVRQATDRLNNQWYINQS------------RTLSPTEREILRFMSRGYSMTQIAE 175 G + + + + LSP E ++LR +++G+S +IA Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 + ++K+I +K KLG+ + A ++ A Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHG 214 >UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7 Tax=Bacteria RepID=B3DW63_METI4 Length = 243 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 16/212 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V +++ + G+ L G + + + + V+ S Sbjct: 20 KVLIVDDHAILREGLIQLINSTPGLS-VCGAAKNAHEGFELIEKTMPDVVLVDISLPG-- 76 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 + GL + ++ +P LV++ + L G L K + + Sbjct: 77 -KSGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGA-RGYLMKNEGGQKLIAAIQK 134 Query: 130 SLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 L G ++R+ N+ I+ LS E E+ + + +GY QIAEQL Sbjct: 135 VLAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLS 194 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 ++KT+ A++ ++ KL + S L+ A Sbjct: 195 LSVKTVEAYRASIKQKLYLKSGPQLVHYAISW 226 >UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601 RepID=C2C4B6_LISGR Length = 214 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 15/209 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + ++ + E+F + V+ S Sbjct: 1 MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFL-FIESNRPDIVLMDLSMP-- 57 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + FP T+ +++ D EA + +L G + K S+ E+ + Sbjct: 58 PGENGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGA-QGYIMKNSSEELLLDAIR 116 Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + G N LS E+EIL ++ GY +IAE+L Sbjct: 117 SVMGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 + KT+ HK ++M KL + + LL Sbjct: 177 FISAKTVEVHKSHIMKKLEMKKFSDLLRF 205 >UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531 RepID=C4V1Z2_9FIRM Length = 209 Score = 219 bits (559), Expect = 6e-56, Method: Composition-based stats. Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71 +++ ++ GI+ L + + + +E+ + +++ VI S Sbjct: 1 MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALR-LLAQQPIDLVIMDISMPGMG-- 57 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 GL+C+ E+ +P + LV++ + E + ++ + G L K S L + Sbjct: 58 -GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAM-GYLPKTSADNELFDALQVLS 115 Query: 132 NGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G R + R + + L+ ERE+ + GY++T+IAEQL + Sbjct: 116 QGRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLS 175 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +KT+ HK ++ KL S + L+ A + Sbjct: 176 VKTVDTHKKHIYEKLHCSRRSELVTLALRNGLL 208 >UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y661_9BACT Length = 216 Score = 219 bits (558), Expect = 7e-56, Method: Composition-based stats. Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 16/212 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + M G+ L K G E+ A R+ + + R Sbjct: 3 IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEA-VAAAERLQPDVALMDMTMPR- 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ ++A P T+ LV++ + ++ SL G + K + + + Sbjct: 61 --LNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGA-RGYVLKECSSQELCLAIQ 117 Query: 129 LSLNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 NG T RL LS E ++L+ + +G + QIAEQL Sbjct: 118 TVANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQL 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + T+ H+ +++ KLG +S A L A Sbjct: 178 SISKNTVDTHRRHILDKLGCNSMAELTRYAIR 209 >UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4 Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM Length = 223 Score = 218 bits (557), Expect = 9e-56, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 17/221 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K+ V +++ + G++SL + A E+ + V S Sbjct: 1 MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEAL-ALAQELKPDLVTMDVSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-- 123 G+ + + P TR L+++ + + V+ + +T + Sbjct: 60 P---DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQG 116 Query: 124 -----HQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172 E F+ + +L +Q+ L+P E+++LR ++ G S Q Sbjct: 117 FDALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQ 176 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 IA ++ + KT+ H+ N+M KL V S L++ A L + Sbjct: 177 IAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217 >UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YIR2_THEYD Length = 213 Score = 218 bits (557), Expect = 1e-55, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 92/216 (42%), Gaps = 13/216 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 K+ V +++ + G++ + + E+ D +S+ SF V + Sbjct: 2 TKRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEA-IDILSKESFDIVFLDIAM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ L ++ I +P T+ L+++ E I SL G L+K++ E + Sbjct: 61 ---SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPEELLK 116 Query: 126 ELFLSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + + G + + + I LS E ++ +++G S+ +I+++L Sbjct: 117 AVDKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKEL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +IKT+ ++ ++ KLG+ ++A ++ A + Sbjct: 177 SISIKTVSTYRARILEKLGLENNAEIINYAIKHGLI 212 >UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C6S1_SPHTD Length = 223 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 15/222 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + ++ L++ + G+ SL + +E+ + A + V+ Sbjct: 1 MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERA-RELVPDVVLMDIDL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ + + P R +++ D RL S+ ++ + E+ Q Sbjct: 60 PG---IDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQ 116 Query: 126 -----------ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 ++ + + + LSP E E+L ++ S +IA Sbjct: 117 LRGLARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 +L + T++ H N+++KL +SS A + Sbjct: 177 ARLSISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIPPP 218 >UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0Q9H4_DESAH Length = 217 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 16/217 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K V + + M GI + G E + +S VI S Sbjct: 1 MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIE-LLNLLSTQPADLVILDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + G+ ++ +P + L ++ L + S +G L K T Sbjct: 60 P---KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGA-NGYLLKEDTDTEILT 115 Query: 126 ELFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIA 174 + L G + TLSP E E+L ++ G S +IA Sbjct: 116 AMDTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 + L + +T+ H+ ++M +L + + A L++ A Sbjct: 176 DILCISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212 >UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9FM25_SORC5 Length = 233 Score = 218 bits (556), Expect = 1e-55, Method: Composition-based stats. Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 15/224 (6%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M + K ++ LI+ + G T+ ++ ++ + V+ Sbjct: 14 MAETPASKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRET-ASCKPDVVL 72 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + R+G+ L L + P+ + LV++ D E R+ +L ++ K S L Sbjct: 73 VDLNIP---DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLV-KTSKL 128 Query: 121 EIFHQELFLSLNGVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSM 170 E + + G + + L+P ER++LR ++ G S Sbjct: 129 EEVIEGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVST 188 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 + A +L + KT+ H+ + +KLG S L A + Sbjct: 189 RETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE 232 >UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2 Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD Length = 232 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 17/218 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + +++ + G + + + +E+ + R+ V+ + Sbjct: 12 RLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREA-IELCRRLRPDVVVMDLAMPG-- 68 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +GL + + P+ LV+ + ++ +L G + K+S L L Sbjct: 69 -VDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAA-GYVLKSSPLPRVISALRR 126 Query: 130 SLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177 L+G L + + + L+ ERE+L M+RG + +IA +L Sbjct: 127 LLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAREL 186 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + T ++H N++ KLGVS + A L + Sbjct: 187 VISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEP 224 >UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae RepID=A0RDP4_BACAH Length = 221 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 12/211 (5%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L+E + G+ + + E + V+ S Sbjct: 14 KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEA-ENGEDALTFVRTERPDVVLMDLSMP- 71 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 + +G+ ++ + L+++ + ++ +L DG K E + Sbjct: 72 --KMDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGA-DGYQLKEVQPEQLVASI 128 Query: 128 FLSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G ++ N L+ E+E+L+ +++G S +IA +L Sbjct: 129 IAIYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHIT 188 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 +T++ H N+++KL V A Sbjct: 189 EQTVKTHVSNILAKLEVDDRTQAALYAVKHG 219 >UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q024Y7_SOLUE Length = 225 Score = 217 bits (555), Expect = 2e-55, Method: Composition-based stats. Identities = 40/209 (19%), Positives = 87/209 (41%), Gaps = 17/209 (8%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 + L++ + G+ + + + ++ + S V+ Sbjct: 5 IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADA-VQLCKKSSPDIVLMDIGLPGM-- 61 Query: 71 REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130 G+ TEL P + ++++ D E ++ ++ VL KAS+ E+ L Sbjct: 62 -NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELL-DALRTV 119 Query: 131 LNGVRQATDRLNNQWY------------INQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + +++++ + +LSP E ++LR ++ G + IA L Sbjct: 120 ARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLD 179 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 ++T+R+++ +M KLGV++ AGL + A Sbjct: 180 LGLQTVRSYRKTMMKKLGVNNVAGLTQLA 208 >UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4 Tax=Proteobacteria RepID=Q1H354_METFK Length = 213 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 12/213 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L++ + G+ L + G S E ++ S Sbjct: 5 IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEA-DSGEQAYQFYGEHMPDVIVMDMSMPGM 63 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL L + ++P+ R ++ + + A +L ++K+ + Q + Sbjct: 64 G---GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARA-YVAKSGAADDLVQAVR 119 Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + + Q + +R LS E E+ R ++ G + +I+ LK + Sbjct: 120 EVAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQ 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KT+ ++ + KLG++S L+ A + Sbjct: 180 KTVANYQTLLKQKLGITSPIELVRLAIKHGVIE 212 >UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales RepID=C0ZDE8_BREBN Length = 214 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 12/209 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ M G+ L ++ ++T ++ A +++ V+ S Sbjct: 2 IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKA-NQLKPDVVLMDLSLPNG 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G + E+ P + +++ D E + +++ G + K S E+ Q + Sbjct: 61 --LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGA-HGYILKNSHGELLFQAIV 117 Query: 129 LSLNGVRQATDRLNNQ--------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G ++ + L+ E+E++R + GYS ++A++L + Sbjct: 118 EVYRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLIS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +KT+ HK N+M KLG+ S L++ A Sbjct: 178 VKTVENHKTNIMQKLGLDSKHQLIQYAIK 206 >UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=52 Tax=Bacilli RepID=A4VZN8_STRS2 Length = 213 Score = 217 bits (554), Expect = 2e-55, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 83/217 (38%), Gaps = 10/217 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + V L++ M +G++S +E A+ + V+ Sbjct: 1 MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALE-VKPDVVVMDLVM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + G+ L ++P+ + +++ ++ L G + K S+ + Sbjct: 60 P---KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGA-RGYMLKTSSADEILA 115 Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + G + +++ + + L+ EREIL +++GY +IA++ + Sbjct: 116 AIRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFIS 175 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 +KT++ H N++SKL VS + A + + Sbjct: 176 LKTVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQED 212 >UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria RepID=B4VFW8_9ACTO Length = 216 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 13/213 (6%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + V L++ + G+ + +E A + ++ Sbjct: 7 RVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARA-EELRPDVILMDIKMPG 65 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 + +G+ L L R L++ + ++ +L G + K + + Sbjct: 66 T---DGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAA-GYVYKDIDPDALAGAI 121 Query: 128 FLSLNGVRQATDRLN--------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G + ++ L+ ERE+L ++ G S +IA L Sbjct: 122 RSVHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVL 181 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 + KT++ H N++ KL V+ A Sbjct: 182 SEKTVKTHVSNILMKLDVADRTQAALWAVRHGI 214 >UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti RepID=Q98DH9_RHILO Length = 215 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 13/217 (5%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + + + + + GI ++ + A + + E+ + VI +S Sbjct: 4 PRIKIVIADDHPIVRSGIRAVLEQRAEW-WVCGEADNGETAVRLAREHAAKIVILDYSLP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL + P T L+ + E+ + +L G L K Sbjct: 63 ---VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGA-RGYLLKIEDDSELVAA 118 Query: 127 LFLSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + + G + R++ + SR L+ ERE++RF+S G S +IA +L Sbjct: 119 VAALIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLG 178 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 ++KT+ +H+ M KLG+ + L+ A Sbjct: 179 VSVKTVDSHRTTAMRKLGLRNAVDLVRYAIRNKLTLP 215 >UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1 Length = 224 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 15/215 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 + V L++ + G++++ + + + + A + ++ Sbjct: 2 MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQA-KTLQPDVILMD 60 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 + + +G++ E++ P + L++ D L+ ++ + G L K + E Sbjct: 61 INMPQM---DGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAV-GYLLKNTPPED 116 Query: 123 FHQELFLSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQ 172 F Q + + G Q L + I ++P E+++L+ ++ G S + Sbjct: 117 FIQSIQQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNRE 176 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 I+E L KT++ H +++S++GV S L A Sbjct: 177 ISETLHITEKTVKNHVSSILSRVGVQSRTQLAIWA 211 >UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT Length = 242 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 16/220 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +R V L++ G+ ++ + T+ + +AM R++ + S Sbjct: 20 PAQRRVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMAL-EAMRRLNPDIAVIDISM 78 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + G+ + + + P + L+++ D + +L G + K LE Sbjct: 79 PGT---NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGA-KGYVMKGEALECVLT 134 Query: 126 ELFLSLNGVRQATDRLNNQWY-----------INQSRTLSPTEREILRFMSRGYSMTQIA 174 L G + + +++ + LS E E+LR + RG+ +IA Sbjct: 135 GLRKVGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIA 194 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 E+L ++KT+ H+ ++ KLG ++ A + Sbjct: 195 EELSLSVKTVETHRAHIKEKLGFKEAGEMVRFAIDWVAQE 234 >UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF Length = 212 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 18/217 (8%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71 + + + G+ +L G +E+ + A + V+ + Sbjct: 1 MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLA-QELRPDVVVLDVTMPE---L 56 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 GL E+ P T +++ D + L +L G + K + Sbjct: 57 NGLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGA-RGYVLKEDAARHLVDAIDALS 115 Query: 132 NGVRQATDRLNNQWYINQSR-------------TLSPTEREILRFMSRGYSMTQIAEQLK 178 R + ++ +L+ ERE+LR +++G S ++A QL Sbjct: 116 KHAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLS 175 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + KT+ H+ NVM KLG SS L+ A + Sbjct: 176 ISAKTVETHRANVMRKLGASSIVDLVHYAIRNGIVEP 212 >UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QSJ5_9RHOB Length = 212 Score = 217 bits (553), Expect = 3e-55, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 12/215 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 K V L + + GI + K +E+ + ++ S Sbjct: 2 TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREA-VKLAHELRPDVLLMDVSM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL E+ FP L+++ D + G + +L S E Sbjct: 61 P---VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPE-MIT 116 Query: 126 ELFLSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + +G + + I L+ ER++L +++G ++A+ L Sbjct: 117 AISSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLG 176 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +++T+ +H+ N+ K+G + A L + A L + Sbjct: 177 ISVRTVESHRLNLREKVGNKNAAQLYKVAQDLGLL 211 >UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae RepID=A9WKI8_CHLAA Length = 209 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 8/213 (3%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + VAL++ + G+ + + ES S ++ Sbjct: 1 MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAA-NGESALQMASTWQADVIVMDVLM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ +L P T ++++ +AR+IG+L + + K S E + Sbjct: 60 PGG--IDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAIT-YIEKESQPEQLLE 116 Query: 126 ELFLSLNGVRQATDRLNNQWYINQ----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + ++ G L + Q + TL+ ERE+L+ ++ G + +IA +L + Sbjct: 117 AIRGAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSE 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +T++ H +++ KLG++ A + Sbjct: 177 ETVKTHVASILRKLGLAHRTQAAIYALRHGLVS 209 >UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1 Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM Length = 206 Score = 216 bits (552), Expect = 4e-55, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 74/210 (35%), Gaps = 10/210 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G+ L ++ + ++ + S Sbjct: 2 IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDAL-QLIRDLNPDVALLDISMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + + + TR L++ D I + L V+ + + Sbjct: 60 --LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNA-FSELLDAIL 116 Query: 129 LSLNGVRQATDRLNNQ-----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G R ++ + + + LSP E+E++R ++ G + +IA L + KT Sbjct: 117 AVAAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKT 176 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 + H+ +M KL + + A ++ A + + Sbjct: 177 VDTHRTRLMRKLNLHTTADVVRYAMRMGLV 206 >UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1 Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP Length = 220 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 14/210 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + M + +L + + E V + Sbjct: 3 LRILLADDHQMFRHALRALLARDPELEVVAEAASG-EEVLAIADAQPVDLVCMDIAMPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ L + P R + ++ + L + G ++K + + + Sbjct: 62 ---DGIEATRRLLARHPALRVIGLSAFADRQFVTD-LLAAGARGYITKGEAGDELLRAIR 117 Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G + + L+ ER++L+ ++ G + QI ++L Sbjct: 118 TVCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHI 177 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 T+ H+ N+M KL + + A L A Sbjct: 178 AASTVEVHRRNLMRKLDLHNVAELTRYAIH 207 >UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4 Tax=Bacteria RepID=D1C9Z8_SPHTD Length = 212 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 14/216 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + +++ + G+ ++ ++ Q + V+ + + Sbjct: 2 IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQY-RDLKPDVVLMDLAMPGT 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ + E+ P R +V+ D + R++ ++ G L K + E + + Sbjct: 61 ---DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGA-SGYLLKGAPREDIFRAVR 116 Query: 129 LSLNGVRQATDRLNNQWYINQ---------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G + + L+ E ++L M+RG +IA +L Sbjct: 117 VVYRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +T++ H + KL VS + A +R Sbjct: 177 TERTVKFHANAIYRKLDVSGRTEAVSKAIQRGLVRP 212 >UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1 Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR Length = 211 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 12/211 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK + L + ++ GI ++ G + E+ A+ R+ V+ + Sbjct: 1 MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEA-ISAIQRLQPDVVLLDIAM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ + P T+ LV++ D + +L + ++G L K L Q Sbjct: 60 PG---PSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQAL-AAGVNGYLLKDFVLAELLQ 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLK 178 L + L+G R + ++ + + L+ + EILR ++ G + +IA L Sbjct: 116 ALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLG 175 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + KT+ H+ +M ++GV GL A Sbjct: 176 ISPKTVEFHRSRLMERIGVHDVTGLTRFALQ 206 >UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NY27_AZOSE Length = 215 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + M + ++ K G ++ + D +S Sbjct: 3 IRIVLADDHQMFRHALRAMLEKEPGIRIVGEA-SNGDELIDLISHQPVDIACVDIGMPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ L P R + ++ ++ L+ G ++KA E + + Sbjct: 62 ---NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGAT-GYVTKAEAGEELLRAIH 117 Query: 129 LSLNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + N + ++ ER++L+ ++ GY+ T+IA++L Sbjct: 118 TVQQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHL 177 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 T+ H+ N+M KL + S A L + A Sbjct: 178 APSTVEVHRRNIMRKLDLHSVAELTKYAIR 207 >UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=C6E2Z1_GEOSM Length = 216 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 16/217 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + GI L +F + + + ++ V+ + Sbjct: 2 IKVMVVDDHSIVREGIRILLERFPDLSVVAEA-DNGRKASELAADLAPHVVLMDMTMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ L P R L+++ + + + G L K Q + Sbjct: 60 --LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGA-RGYLLKDCASAELVQAVR 116 Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 G + + L+P ERE+L+ ++ G + A QL Sbjct: 117 QVACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 N+KT+ H+ +M KL + S A L + A + Sbjct: 177 NINVKTVDTHRQQIMKKLKMRSVAELTKYAIREGLIS 213 >UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF Length = 228 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 10/212 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + V + + + G+ + + + A+ ++ + Sbjct: 12 AQIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSA-ERAVRAHHPHVLVLDLNMP 70 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + L + L + P T +V+ A +L G + K + + Q Sbjct: 71 GEQS---LPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGA-RGYVLKEAADDELVQA 126 Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + L+ G L + + L+ E E+LR ++ G++ +IA+QL +I Sbjct: 127 VRLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSI 186 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +T+ +H+ ++ K+ SS A L+ A M Sbjct: 187 RTVESHRAHIQQKVRRSSRAELVRYALDHGLM 218 >UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1 Length = 212 Score = 216 bits (551), Expect = 5e-55, Method: Composition-based stats. Identities = 31/216 (14%), Positives = 86/216 (39%), Gaps = 14/216 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +A+ + + G+ + + E+ + + + ++ + Sbjct: 2 IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEA-VEVVKEKAPDVLLLDITMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 ++G+ ++ T+ L+++ E + +L +G +SK + LE + + Sbjct: 59 -VKDGIEATADILALNVNTKILILSMHADEQYALRTLRAGA-NGFISKGARLEELLKAIT 116 Query: 129 LSLNGVRQATDRLNNQWYINQ---------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G R D++ + TLS E +++ +++G + +IA L+ Sbjct: 117 DVHEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 ++KT+ H+ +V+ KL + +++ + A ++ Sbjct: 177 SVKTVDTHRSHVLKKLELRNNSDITRFAIQHGYIQF 212 >UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes RepID=LIAR_BACSU Length = 211 Score = 215 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V LI+ M +G+ + E + A+ +S ++ Sbjct: 2 IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVE-LSPDVILMDLVMEGM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ ++ + + +V+ + ++ + L L K S + Sbjct: 61 ---DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALS-YLLKTSKAAEIADAIR 116 Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G + ++ + +L+ E EIL ++ G + +I E+L Sbjct: 117 AASKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 IKT++ H N++SKL VS A Sbjct: 177 TIKTVKTHITNILSKLDVSDRTQAAVYAHR 206 >UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=101 Tax=Bacteria RepID=C7MUJ2_SACVD Length = 239 Score = 215 bits (550), Expect = 6e-55, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 21/229 (9%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 + + + V L + + G + G E+ + A +R V+ Sbjct: 14 KDTGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVA-TRERADVVLM 72 Query: 62 SFSAMRSERREGLSCLTELA----IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKA 117 + +GL L P T+ +++ D E L +L G L K Sbjct: 73 DVQMP---KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGA-SGFLLKN 127 Query: 118 STLEIFHQELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSR 166 ++ E + + + G + + + + L+ E E+L +++ Sbjct: 128 ASPEDLIESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAK 187 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 G S +IA QL T++ H +++KL + + A + Sbjct: 188 GASNAEIARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVTP 236 >UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales RepID=DEGU_BREBE Length = 236 Score = 215 bits (550), Expect = 7e-55, Method: Composition-based stats. Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 29/227 (12%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 E K + +I+ + G++ + E+ + + + + ++ Sbjct: 3 EQVNENKIQIVIIDDHQLFREGVKRILAMEPEFEVVAD-GEDGENAVELVEKYNPDVILM 61 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 + + G+ +L ++P + LV++ D E+ + L G L K + Sbjct: 62 DINMP---KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGA-SGYLLKEMDAD 117 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYIN------------------------QSRTLSPTE 157 + + + G ++ + L+ E Sbjct: 118 ALIEAVKVVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRE 177 Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 E+L+ M+ GYS I E L + KT++ H N++ K+ V+ + Sbjct: 178 CEVLQLMTDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAV 224 >UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=Q1AVR6_RUBXD Length = 220 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 18/220 (8%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V ++E + G+ +L G E+ + V+ R Sbjct: 6 RVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGA-RPEVVLVDVRMPRM- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ + L + P +++ D + + L G + K + E + Sbjct: 64 --DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGA-RGYILKDTPSEELAAAIEK 120 Query: 130 SLNGVRQATDRLN-------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 G + S LS E E+LR ++ G S +IA Sbjct: 121 VHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARA 180 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 L T++ H +++ KLG A + Sbjct: 181 LYITEGTVKNHISSILRKLGFRDRTQAALYALERGWIEAP 220 >UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WSR5_ALIAD Length = 231 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 18/219 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + G+ ++ R G +E+ + + + Sbjct: 10 IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREA-IECFQTLQPDVTLLDIHMP-- 66 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL ++ P T+ L++ + E L ++ G + K+ + E + + Sbjct: 67 -VCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGA-SGYVLKSVSPERLIECVR 124 Query: 129 LSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 G L + L+ ERE+L+++S G S +IA Sbjct: 125 QVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIAR 184 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 L + T+R H +++ KL +S+ A A R Sbjct: 185 ALFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIAR 223 >UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderia RepID=Q13QW9_BURXL Length = 220 Score = 215 bits (549), Expect = 8e-55, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +V L++ + G L A + +++Q + + V+ S Sbjct: 6 ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCA-LRPDVVVMDVSLPG- 63 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + + + P R L+ + + + +L L G ++KAS ++ + + Sbjct: 64 --ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGAL-GYVTKASAPDVLVEAVR 120 Query: 129 LSLNGVRQATDRLNNQWYIN-------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + ++ + R LS E E+LR + +GY++ IAE+L + Sbjct: 121 TIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQ 180 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KT+ H+ + K G + L + A L Sbjct: 181 KTVANHQSVIRQKFGADNGVQLAQMASRLGLQ 212 >UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4 Tax=Leptospira RepID=Q04VJ6_LEPBJ Length = 221 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 23/226 (10%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + L++ + G++ + E D + +++ VI S Sbjct: 2 KPTNTKIFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVITDIS 58 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 G+ + L ++P R ++++ D + L ++G + K Sbjct: 59 MPG---LSGIDLVKNLRKQYPNIRTIILSRHDNREYV-QKLLELGINGYVLKDDAGNDLL 114 Query: 125 QELFLSLNGVRQATDRLN----------------NQWYINQSRTLSPTEREILRFMSRGY 168 + + G + + NQ LS EREIL+ ++ G Sbjct: 115 RAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGN 174 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 S I + L + T++ H+ N+M KL + A L+ A + Sbjct: 175 SNESIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIE 220 >UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFI8_DESAH Length = 220 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 17/216 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + + + G+ L + G +++ A+ + VI + Sbjct: 4 RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAV-KFKPDIVIMDITMPNM- 60 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G ++ PRTR + ++ + + + VL K S + Sbjct: 61 --NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVL-KDSAFAELFDAIQA 117 Query: 130 SLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 G + + + +SP ERE+L+ ++ G QIAE+L Sbjct: 118 VGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLF 177 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +IKT+ AH+ N+M+KL +SS AGL A + Sbjct: 178 VSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213 >UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47 Tax=Proteobacteria RepID=B6A2W0_RHILW Length = 223 Score = 215 bits (548), Expect = 1e-54, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 9/210 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K V LI+ + G++++ F T ++ D +I V+ + Sbjct: 5 PKIRVLLIDNHPLVLDGLKAVLETFDHIE-VAGTAGLAQTGLDIARQIQPQVVLMDINMP 63 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + G+ + +FP R ++++ D + S+ G + K + + Sbjct: 64 ---KLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAA-GYVLKDVSTDEIVAA 119 Query: 127 LFLSLNGVRQAT----DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + +G + D L + S L+P E +IL + G S +IAE L + Sbjct: 120 IETVADGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSA 179 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 T H+ N+ KLG+++ AGL+ A Sbjct: 180 TAETHRKNLKKKLGIATTAGLIRYALDHGI 209 >UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4 Tax=Firmicutes RepID=C6CZA5_PAESJ Length = 221 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 80/214 (37%), Gaps = 13/214 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFS 62 V +++ M G+ + + Q + + + ++ Sbjct: 4 TNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMD 63 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 +G+ +L +++P + +++ + ++ G++ + VL S E+ Sbjct: 64 LMMPGM---DGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120 Query: 123 ---FHQELF----LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 H + ++ + + T L + + L+ E+E+L ++ G S +I E Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGE 180 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +L ++KT++ H N++ K + L A Sbjct: 181 ELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHR 214 >UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI0001746AEC Length = 222 Score = 214 bits (547), Expect = 1e-54, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 16/218 (7%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + K V L++ M G + ++ E+ + ++ V+ + Sbjct: 6 PVSKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEAL-GLLEQVRPDLVVTDLT 64 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 R GL + ++ FP T+ LV + D +L G + K + F Sbjct: 65 L---GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGA-RGYVMKDADGPTFL 120 Query: 125 QELFLSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + L G R + RL + + LS E E+ R G + +I Sbjct: 121 TAVRTVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEI 180 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 A QL + KT+ H+ ++ KLG S+ A ++ A + Sbjct: 181 AAQLNLSPKTVSVHRDHIKEKLGFSTSAEMIRQAVRHV 218 >UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT Length = 218 Score = 214 bits (547), Expect = 2e-54, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 78/220 (35%), Gaps = 14/220 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 K V L++ M G+ + + E+ S V+ + Sbjct: 3 TNKIKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL 62 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + G + + P L ++ D +L G + K EI Sbjct: 63 ---KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGA-RGYVMKQEPGEILLA 118 Query: 126 ELFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + L G + +++ + TL+P+E E+L + +G+S +IA+ Sbjct: 119 AIHEVLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAK 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L R+IKTI H+FN+ KL + A L+ A + Sbjct: 179 LLCRSIKTIETHRFNIRVKLHLKDGADLIRYATRWISEEP 218 >UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1 Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ Length = 215 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 8/207 (3%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + V +++ + G + ++ + E ++R+ V+ Sbjct: 2 KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASG-EDALAMVNRLHPRVVLMDIR 60 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 G+ + + P TR L++ D E + G+ G LSK + Sbjct: 61 LPGM---NGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAA-GYLSKTAPGRELV 116 Query: 125 QELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + G L + + TL+ ER +LR ++ G QIA +L + Sbjct: 117 EAVRAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208 +T+ H + KLGV+S + A Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAI 203 >UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Roseiflexus RepID=A7NIZ3_ROSCS Length = 230 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 78/222 (35%), Gaps = 16/222 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 S V +++ ++ G+ ++ G + + D ++R V+ Sbjct: 9 SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEA-DNGAAALDFVARHPVDLVMMDL 67 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 +G+ + P +++ L+ +L + G L K ++ Sbjct: 68 QMP---VIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAG-VAGYLLKDASRREI 123 Query: 124 HQELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQ 172 + L G L L+P E+++LR + +G + + Sbjct: 124 IGAVRQVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNRE 183 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 IA +L + T++ H ++++KLGVS A L +R Sbjct: 184 IARELIISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLVR 225 >UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR Length = 326 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 10/216 (4%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVI 60 + V LI+ + G+ G + + + + VI Sbjct: 110 TTSSAARVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVI 169 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 G++ L ++P L+++ D + ++ G + K + Sbjct: 170 TDIGMRGMG---GIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGA-RGYVLKDAPA 225 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + + L G + R+ + L+P ER+IL + RG + IA QL Sbjct: 226 DELLAAIQAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQL 285 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +++T+ H+ N+ KLG+ A L++ A L + Sbjct: 286 GVSVRTVETHRLNLKRKLGIEGRAELVKYAVQQLGL 321 >UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3 Tax=Betaproteobacteria RepID=Q2YB36_NITMU Length = 217 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K V L++ M G+ L E+ + V+ S Sbjct: 4 SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL- 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 + G + + P LV++ D +L G + K E+ Sbjct: 63 --KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGA-RGYVMKQEPGEVLVTA 119 Query: 127 LFLSLNGVRQATDRLNNQWYINQS----------RTLSPTEREILRFMSRGYSMTQIAEQ 176 + L G + ++ + + +L+P+E E+L + G+S +IA+ Sbjct: 120 IHEVLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKL 179 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 L R+IKTI H+FN+ +KL + A L+ A Sbjct: 180 LSRSIKTIETHRFNIRTKLNLKDGADLIRYATHW 213 >UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XNR8_DESMR Length = 220 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 18/221 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + L + + G+ L E+ + R+ ++ S Sbjct: 1 MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADG-EALLALVERVPAEVLVLDLSM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R GL C+ EL + + LV+ + +++ L G + K + Sbjct: 60 PR---VSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGAL-GYIEKQALDSELFV 114 Query: 126 ELFLSLNGVRQATDR------------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173 + +G R + + L+ ERE+L+ + RG+++TQI Sbjct: 115 AIRTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQI 174 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 A L ++KTI HK +VM KL ++ + L++ A + Sbjct: 175 AGLLHLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLLA 215 >UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9 Tax=Betaproteobacteria RepID=Q47FR0_DECAR Length = 218 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 83/218 (38%), Gaps = 14/218 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + IG++ + E+ + + + +F A++ + Sbjct: 2 IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVE-LRKGTFDALVLDLTMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R G+ + ++ +FP+ L+++ + + SL G L K S + + Sbjct: 60 --RNGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGA-SGYLCKDSAETLLADAIR 116 Query: 129 LSLNGVRQATDR---------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +G L+ + L+ E +I + +G +T+I QL Sbjct: 117 KVADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNL 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 ++KT+ HK ++++K+ + + A L+ A + + Sbjct: 177 SVKTVSTHKASILAKMNLRNSAELVRYAIQHRLIDEND 214 >UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3 Tax=Verrucomicrobia RepID=B4CWX5_9BACT Length = 210 Score = 214 bits (546), Expect = 2e-54, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 6/214 (2%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 ++K + +++ + G+ + + E+ + V+ Sbjct: 1 MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQF-RKHHPDVVLMD 59 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 G + +L ++P R L+ D E + ++ G L K++ E Sbjct: 60 LRLPG---ANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGA-RGYLLKSAAREE 115 Query: 123 FHQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G R + L + + +S ERE+L+ ++RG + +IA L + Sbjct: 116 LLSAIRAVAAGERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISE 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +T++ H N+ K+GV+ A ++ Sbjct: 176 ETVKRHASNLFVKMGVADRAQATSEGIRRGLIQL 209 >UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10 Tax=Bacteria RepID=Q1IXN1_DEIGD Length = 221 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 11/226 (4%) Query: 1 MEHSRIKK-RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAV 59 M + V L++ + G+ + +E+ A R+ V Sbjct: 1 MTDPTPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAA-ERLHPDVV 59 Query: 60 IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119 I +G+ L + P T + + E ++ G++ + G + K ++ Sbjct: 60 IMDLMMP---VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAM-GYMLKDAS 115 Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYIN-----QSRTLSPTEREILRFMSRGYSMTQIA 174 + + + G + + + TL+P E +L+ ++RGYS IA Sbjct: 116 SDTLADAIHAAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 T++ H ++ KLG+ S A R ET Sbjct: 176 RDQGVTEATVKTHVSRLLGKLGLESRTQAALYALRHGLARLEETGG 221 >UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28 Tax=Proteobacteria RepID=B2JSN3_BURP8 Length = 210 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G++ + E D + + ++ + Sbjct: 2 IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSE-VVDKLRTCAVDLLLLDMTMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + + + P LV++ D +L G L+K S ++ + Sbjct: 60 --ISGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGAT-GYLTKDSDPDVLLAAIR 116 Query: 129 LSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +G R +L ++ + LS E ++L+ ++ G S+ +IA+ + Sbjct: 117 KLADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSA 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KTI HK +M KLG++++A ++ A + Sbjct: 177 KTISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208 >UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MVU6_9BACT Length = 216 Score = 214 bits (545), Expect = 2e-54, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 15/218 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++ + L++ + G+ L ++ G T E F + V F+ Sbjct: 1 MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTG-EEFLAMLPATEADVVFMDFAM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G + P + + ++ E + G L K S ++ + Sbjct: 60 PGM---NGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGA-KGFLMKDSPMDEVLR 115 Query: 126 ELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIAE 175 + G + + LS E EIL + RG S +IA+ Sbjct: 116 AIETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIAD 175 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +L + +T+ H+ N++ K G + A L+ A + Sbjct: 176 ELFISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLV 213 >UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6H7_9GAMM Length = 214 Score = 214 bits (545), Expect = 3e-54, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 83/212 (39%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G+ L + + ++++Q IS ++ S Sbjct: 5 IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPE-ISPDVLVMDMSMPGM 63 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + + ++ + ++ + + I SL+ + G ++K+ E + + Sbjct: 64 G---GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAM-GYVAKSGHAEDLVKAVR 119 Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +G + + ++ N ++ L+ E E+ R ++ G + IA +L Sbjct: 120 EVKSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQ 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KT+ ++ ++ KLG+ S L+ A + Sbjct: 180 KTVANYQTSLKQKLGIHSPVDLVRLAMKYGVI 211 >UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TQ52_9BACT Length = 214 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 33/215 (15%), Positives = 79/215 (36%), Gaps = 15/215 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + + G+++L + +E+ I + + Sbjct: 3 IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEAL-SIAGEIRPDVTVMDVMMPQM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ + R + ++ + + L L G L K + + Sbjct: 62 ---DGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGAL-GFLLKDCASTELVEAVR 116 Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 ++G +++ + L+P E+EIL ++ G + ++AE+L Sbjct: 117 KVMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHL 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +IKT+ H+ ++M+KL + + A L++ A + Sbjct: 177 SIKTVGTHRQHIMNKLKLKNLADLVKYAIRNGMIS 211 >UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio magneticus RS-1 RepID=C4XMF2_DESMR Length = 218 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 19/222 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + +++ + G++++ R+ + E+ + A + S Sbjct: 1 MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTA-KDCRPDLAVLDISL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R G+ EL P L+++ + +L L G L+K + + Sbjct: 60 P---DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGAL-GYLTKDAATDNLLS 115 Query: 126 ELFLSLNGVRQATDRL--------------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171 L G L + + +L+P ERE++R + G S Sbjct: 116 GLRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNK 175 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 ++A L+ ++KT H+ ++M KLG+ + L+ A L + Sbjct: 176 EVAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLI 217 >UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12 Tax=Bacteria RepID=A7NP18_ROSCS Length = 222 Score = 213 bits (544), Expect = 3e-54, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 14/222 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 S + + L + M G+ L + G T +E A + + V+ Sbjct: 1 MSTMP-IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAA-LRPDIVLLD 58 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 +G++ +LA P + +++ + L ++ L K + + Sbjct: 59 IQMPE---IDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARA-YLLKDADADE 114 Query: 123 FHQELFLSLNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 + G + L+ ER+IL ++ G+ IA Sbjct: 115 LIDVIERVHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIA 174 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 ++L + KT+ + KLGVS+ A + Sbjct: 175 QRLFLSEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLIAPP 216 >UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10 Tax=Proteobacteria RepID=Q1GZT3_METFK Length = 215 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 13/219 (5%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 S V + + + G++ + + + E+ V+ Sbjct: 1 MSFTSTIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEA-IKLAGTKGLDVVVLD 59 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 S R G+ + + P L+++ +A I +L + G LSK S + Sbjct: 60 ISLP---DRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAV-GYLSKQSASDQ 115 Query: 123 FHQELFLSLNGVRQAT--------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 + G + + D+++ TLS E + L ++ G S+++IA Sbjct: 116 LVTAIRTVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 E L ++KT+ ++ ++ KL + +A L A + Sbjct: 176 ENLSLSVKTVSMYRARLLEKLNLRHNAELTHYAIKNNLI 214 >UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N7Q7_9GAMM Length = 226 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 12/222 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L++ + G SL +K E++ + V+ S Sbjct: 5 ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQY-KKYQPDIVVMDISLPGQ 63 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + + + + LV + + + + L G ++K+S E + + Sbjct: 64 ---SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGAL-GYITKSSDPEDLIRAIA 119 Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + + L+ E EILR + S IAE L + Sbjct: 120 EVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISP 179 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223 KT+ + + KLGVSSD L A + + + + H Sbjct: 180 KTVSNSHYIIKKKLGVSSDIELTRLAIKMNLVNLLDLVDEAH 221 >UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces maris DSM 8797 RepID=A6BYP5_9PLAN Length = 221 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 16/223 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M +K V +++ + G L + ++ + M +I Sbjct: 1 MSQVNQQKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMEN-PPDLII 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S + GL + ++ +F + + L ++ D SL L G ++K Sbjct: 60 VDISL---KDGSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGAL-GYVNKQQAP 115 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWY-----------INQSRTLSPTEREILRFMSRGYS 169 E + ++ L G + + + + +LS E E+ + G + Sbjct: 116 EQLIKAIYQVLKGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGET 175 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 IA++L + KT+ ++ N+ KL + + L A + Sbjct: 176 TRSIAQKLNLSSKTVETYRENIKHKLNLENATALTRHAIQWVL 218 >UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus sp. BH72 RepID=A1K960_AZOSB Length = 209 Score = 213 bits (544), Expect = 4e-54, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 13/211 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V + + + G+ Q + + + V+ + Sbjct: 3 KVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTAL-ELVRTSGCDVVLLDITLP--- 58 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL L + P L+ + + + +L+ G L+K S L Sbjct: 59 DLNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGA-SGYLNKDSPPAQILAALHT 117 Query: 130 SLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G R + L + LSP E +L +S+G +T+I EQ ++ Sbjct: 118 VVAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSV 177 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 KTI ++ ++ KL ++S+A + Sbjct: 178 KTISTYRARILEKLDLASNAEITRYVLQHKL 208 >UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus RepID=B2G7N1_LACRJ Length = 217 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 17/219 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 NV + + + GI L T + +++ + + +I S Sbjct: 3 NVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIR-VEQGGIDILIMDLSMP--P 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL + KFP+ + ++++ + + + +++ + +L K+S L Sbjct: 60 GENGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYIL-KSSPDSEIVNGLKH 118 Query: 130 SLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 +NG + + N + LS E+E+ ++ GYS +I+++ Sbjct: 119 VINGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQK 178 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + + KT+ AHK N+ KL + L++ A + Sbjct: 179 MFISTKTVEAHKANISRKLHLHGRVELVQYAIHHHLIDL 217 >UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP Length = 235 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 13/221 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 ++ +++ V+ G++ + + ++ + M I S Sbjct: 13 LHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQAL-EVMRHQPIDLAIVDLSMPGM 71 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + + +FPR R LV++ E + + +G ++K + Sbjct: 72 ---NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGA-NGYVTKDGASAELVNAVR 127 Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G T L + LS E E+LR + G +T IAE L + Sbjct: 128 KVATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLS 187 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNV 221 +KT+ HK + KL + + A L+ + + + Sbjct: 188 VKTVSTHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDEPGL 228 >UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYF0_9SPHI Length = 218 Score = 213 bits (543), Expect = 4e-54, Method: Composition-based stats. Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 19/219 (8%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 VA+ + V+ G+ ++ + + D + ++ Sbjct: 4 KVAIADDHVLFRKGLVTILELDDNIEVVYGA-DNGKELIDKVDAQPPDVILMDLKMP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ + K+P + LV++ D E +I L +G L K + + + Sbjct: 60 VMDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGA-NGYLLKNTDPDELVHAIGT 118 Query: 130 SLNGVRQAT--------------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + R + S L+ E+E+L + + + ++AE Sbjct: 119 VMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAE 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +L + +T+ H+ N++ K G + AGL+ A + Sbjct: 179 KLFISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217 >UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root RepID=A1WBJ7_ACISJ Length = 239 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 13/215 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + +++ + G+ + +E+ D + ++ S Sbjct: 29 SMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREA-IDLVRVHEIDVLVMDLSMP 87 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL L L K P L+++ E I + G L+K + + Sbjct: 88 GQ---SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGA-SGYLNKECEPKEIVEA 143 Query: 127 LFLSLNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + G R T +LN + LS E ++ +++G + IA+ L Sbjct: 144 IRTIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLS 203 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 ++KT+ ++ +M K+G+SS++ L A + Sbjct: 204 LSVKTVSTYRTRLMEKMGLSSNSDLTYYALKNKLI 238 >UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B5L0_HERA2 Length = 207 Score = 212 bits (542), Expect = 6e-54, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 10/211 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + G+ ++ Q++ + + + V+ Sbjct: 2 IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQA-VNLIEQQQPDVVLLDLRLP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 + G+ + P TR LV+ D + + +L+ G L K ++ E + + Sbjct: 59 -QLSGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAA-GYLLKDASPEEVFRAIR 116 Query: 129 LSLNGVRQA----TDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G R+ + + LS E ++L+ + RG S IA L + T Sbjct: 117 SIYEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENT 176 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 I++H ++ SKL V S A + A ++ Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLVK 207 >UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3 Tax=Cyanobacteria RepID=B2J8J5_NOSP7 Length = 211 Score = 212 bits (541), Expect = 6e-54, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 72/216 (33%), Gaps = 6/216 (2%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M S+ + L + + + + + H +E+ + + + Sbjct: 1 MIMSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREAL-ELFHQHQPDVAL 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + E G + + KF R +V+ D + + L G L K + Sbjct: 60 MDLRMPKME---GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGA-KGYLLKGAEP 115 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + G + + + S LS E E+LR +++G + QI+ L Sbjct: 116 NELLDAIRTVHKGQKYIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNI 175 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 T+R H N+ KL VS L A +R Sbjct: 176 AESTVRFHTNNIFGKLNVSDRTQALVTALNRGIVRL 211 >UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2 Tax=Verrucomicrobia RepID=B1ZT64_OPITP Length = 274 Score = 212 bits (541), Expect = 7e-54, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 17/220 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 K + +++ + +G+ ++ S + + M ++ VI Sbjct: 37 PATTKTRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIM-KLRPDLVIADI 95 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 S + G+ + + P +V++ D + L V+ + T + Sbjct: 96 SLRGN---SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVL 152 Query: 124 HQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMT 171 + + NG ++R+ Q + +LS E EI+ + G Sbjct: 153 -DAIRRARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTR 211 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 +IA +L +IKT+ H+ ++ KL +++ L++ + Sbjct: 212 EIAAKLFLSIKTVETHRVHIKRKLNLANATQLVQFCVRWV 251 >UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ Length = 207 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 11/207 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L+E ++ G+ L + +E+ + + ++ I S Sbjct: 2 IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREAL-ELLEKVQADVAILDVSLP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G++ L +FP R L ++ + + G L G +SKA+ + + Sbjct: 59 -DGTGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGG-QGYVSKAAVDQELLDAVL 116 Query: 129 LSLNGVRQATDRLNNQWY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G R L + + LSP E E+LR +++G S ++AE+L + K Sbjct: 117 AVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEK 176 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209 T+ ++ M KLG++S + LL A Sbjct: 177 TVATYRERGMEKLGLASRSELLRYAAR 203 >UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614 RepID=A1SGL7_NOCSJ Length = 213 Score = 212 bits (540), Expect = 9e-54, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 17/217 (7%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71 +++ + G+ L AG E A + + V+ +R Sbjct: 2 LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLA-ATAAPDVVLLDIRMP---KR 57 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 G+ + P + +++ D EA L ++ G L K S++E Q + + Sbjct: 58 SGIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGA-SGYLLKDSSIEEVAQAVRVVA 116 Query: 132 NGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 +G + + + L+ E E+LR +++G + +IA++L Sbjct: 117 DGQSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFI 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 + T++ H N++ KL + S + A + Sbjct: 177 SENTVKNHVRNILEKLQLHSRMEAVMYAVKEKLLELP 213 >UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3 Tax=cellular organisms RepID=C6XAP6_METSD Length = 214 Score = 212 bits (540), Expect = 1e-53, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G+ L + +G + ++++Q + + S Sbjct: 6 IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYL-PDVTVMDLSMPGM 64 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + + ++ R L+ + + A + +L G ++K + + + + Sbjct: 65 G---GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGA-RGYVAKTGSFDELVKAVV 120 Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + + + + LSP E E+ R + G + +IAE LK + Sbjct: 121 EVARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQ 180 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KT+ + V KLG+S+ ++ A + Sbjct: 181 KTVANYHTLVKQKLGLSNPVEMVRFAIKHGLI 212 >UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria (class) RepID=D2AX12_STRRD Length = 239 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 18/223 (8%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 + + V +++ + G+ + ++ R+ V+ Sbjct: 6 PTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQA-VTLARRLRPDVVVMDI 64 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 +G+ ELA P R L ++ D++ ++G+L G L K S+ E Sbjct: 65 RMP---VLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAY-GFLPKDSSPEDL 120 Query: 124 HQELFLSLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILRFMSRGYSM 170 + G RL + L+P E E+ R M+ G Sbjct: 121 SAAIRTVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDN 180 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 T I+ L ++ T++ + ++ KL V A + A + Sbjct: 181 TGISRTLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223 >UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli subsp. xyli RepID=Q6ADI3_LEIXX Length = 207 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 7/210 (3%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L++ + G+ +L E ++ + V+ + Sbjct: 2 IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGD-PEEYRLLLKSARPDIVLMDLAL--G 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G++ P T LV D +A + SL +L ++ +E + Sbjct: 59 GDTDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVE-LFAAIR 117 Query: 129 LSLNGVRQATDRLNNQWYIN---QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 + +G + + ++ +L+P E E+L ++ G + Q+ E+L + T++ Sbjct: 118 TARDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVK 177 Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 H ++ +KLGV + A + A +R Sbjct: 178 THVNHIFTKLGVDTRAAAVSRAMKEGLIRL 207 >UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=A4J6C2_DESRM Length = 218 Score = 211 bits (539), Expect = 1e-53, Method: Composition-based stats. Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 17/213 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + ++ G+ + T+ + D + V+ + Sbjct: 5 IKLLIADDHILIREGLRKILSIEPHISVVGEV-TNGQQAVDYCLKNPVDIVLMDINMP-- 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ ++ P + + D + L L + G + K + + + Sbjct: 62 -IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFE-LIKYGISGYVLKDIHPDQLIKTIL 119 Query: 129 LSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGYSMTQIAEQ 176 G L + +R L+ E E+L+ +++G S IA Sbjct: 120 GVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANA 179 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 L + KT++ H N+ K+GV+ A Sbjct: 180 LYISEKTVKNHLTNIFQKIGVADRTQAALYAIK 212 >UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16 Tax=Rhizobiales RepID=Q07TZ6_RHOP5 Length = 237 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 20/232 (8%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 ++HS + V + + + G+++L + + A+ + + Sbjct: 13 IKHSSPSRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAID-LDPDVAV 71 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 F S G+ + +L P R LV++ + A L L + G + K S Sbjct: 72 FDLSMPG---LNGIEVIQKLFAVRPHARVLVVSVHEDGANL-RRLLKMGVAGYILKRSAT 127 Query: 121 EIFHQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGY 168 E + + +G + Q LS E+E+L+ + G+ Sbjct: 128 EELVRGIHAVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGH 187 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220 S I+ +L+ K++ +K M KLG +S L+ A L M E++N Sbjct: 188 SNKVISAKLEVGPKSVETYKARAMEKLGFTSRVDLIRFA---LSMGWLESTN 236 >UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60 Tax=Betaproteobacteria RepID=Q39C19_BURS3 Length = 271 Score = 211 bits (538), Expect = 2e-53, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 15/226 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 N+ L++ + GI L G + + A+ + F ++ S Sbjct: 3 LNILLVDDHAIVRQGIRQLLIDR-GVARDVTEAENGGDAVAAVDKQEFDVILLDISLP-- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ L L K PRT L+ + + + +L G LSK + Sbjct: 60 -DTNGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAA-GYLSKTVNAAQMIGAIQ 117 Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G + + + LS E + L ++ G +T IA L + Sbjct: 118 QVAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEA--ADILLCMRHCETSNVLHP 224 +KT+ ++ ++ K+ +S++A L ++ L+ M + P Sbjct: 178 VKTVSVYRSRLLEKMRLSNNAELTFYVMSNRLVDMAPTAGAGSSRP 223 >UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17 Tax=Bacteria RepID=C6D0G6_PAESJ Length = 225 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 23/222 (10%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + L + + GI + +E+ + A + V+ + Sbjct: 2 KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKA-GELQPDIVLMDLNMP- 59 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +G+ + + P + LV+ ++ ++ +L + G + K + + + Sbjct: 60 --IMDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAI-GYMLKDVEPDQLAEAI 116 Query: 128 FLSLNGVRQATDRLNNQWY------------------INQSRTLSPTEREILRFMSRGYS 169 + G Q ++ L+P E E+L +++G S Sbjct: 117 RSAYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLS 176 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 IA+ L KT++ H +++SKL +S A L Sbjct: 177 NKDIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLF 218 >UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria RepID=Q3Z8L1_DEHE1 Length = 224 Score = 210 bits (537), Expect = 2e-53, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 19/218 (8%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M+ +++ V L + V+ G L ++ +G E+ + +M ++ V+ Sbjct: 1 MQTTQM--IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSM-KVHPDVVV 57 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + R G+ ++ P T L++ + E ++ L L K Sbjct: 58 MDIAMPR---LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAAS-FLLKNVKG 113 Query: 121 EIFHQELFLSLNGVRQATDRLNNQ------------WYINQSRTLSPTEREILRFMSRGY 168 + + G + ++ L+ E E+L+ +RG Sbjct: 114 TQLLEAIRAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGV 173 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 S IA+QL + +TI+ H N+ KL V S + Sbjct: 174 SNKDIADQLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211 >UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1 Tax=Natranaerobius thermophilus JW/NM-WN-LF RepID=B2A6W2_NATTJ Length = 215 Score = 210 bits (536), Expect = 2e-53, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 17/212 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +V +++ + G+ L T++E+ + V+ S Sbjct: 3 ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKC-PDVVLLDLSLPDK 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 + G + EL R L + + EA + +L KA+ + + Sbjct: 62 Q---GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAAD-DELISAIR 116 Query: 129 LSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 G Q ++ LS E+E+L+ ++ GY+ +IAE+L Sbjct: 117 SVYQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +IKT+ H + KLG++ + L+ A Sbjct: 177 YISIKTVETHIARIKEKLGLNRRSELVRYAMR 208 >UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=D1C1C8_SPHTD Length = 237 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 16/220 (7%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 K +V L++ V+ + L + + Q R ++ S Sbjct: 19 PAKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSA-QQLAERFHPDVILMDIS 77 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 +G++ +L P T+ +++ + +I ++ D L K S Sbjct: 78 MPG---VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGA-DAYLLKNSESSKVI 133 Query: 125 QELFLSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMTQI 173 + G +L + L+ E ++LR ++ G S +I Sbjct: 134 DAIRAVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEI 193 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 A +L T++ + KL V A + Sbjct: 194 AAELSLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233 >UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC81D Length = 209 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 11/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + V+ G+ + + A+ ++S ++ S R Sbjct: 3 IRVVLADDHVLMRQGVSQMLNANPDISVVGE-CDDGVALIAAVLKLSPDVILMDISMPRM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + ++ + + LV++ + + ++ + G + K S+ E + + Sbjct: 62 ---SGLVAIDKILSQRSDAKILVLSMHNEVEYI-EAMRDAGAKGYILKESSGESLVEAIK 117 Query: 129 LSLNGVRQATDRLNNQWYI------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 D L + L+ ERE+ + G + +IAE L ++K Sbjct: 118 KVAANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLK 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T H+ N+ KL +SS A L+ A + Sbjct: 178 TAENHRSNIYKKLNLSSSAELIRMAGKAGLLE 209 >UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=Q1ASU8_RUBXD Length = 207 Score = 210 bits (536), Expect = 3e-53, Method: Composition-based stats. Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 9/212 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++ + + + M G+ ++ G E S + V+ Sbjct: 1 MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDG-EEVLRLASGLRPDVVLLDLEM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 + G+ L L + +V D E L+ +L G L K ++ Sbjct: 60 PGTG---GVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGA-RGCLLKGASRTEIFD 114 Query: 126 ELFLSLNGVRQATDRLNNQ---WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G + + +S L+P E E+LR ++RG + ++A L + + Sbjct: 115 AVRTVHAGGSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISER 174 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T++ H ++++KL + + A +R Sbjct: 175 TVKFHVSSLLAKLRAENRTQAVAIARERGLLR 206 >UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2 Tax=Shewanella RepID=B8CN77_SHEPW Length = 206 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 86/210 (40%), Gaps = 9/210 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G+ + + + + ++++ V+ + + Sbjct: 2 IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEA-DNGQQALEILNKMPVDLVLTDINMPQM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ L + + + ++++ D + ++ ++ DG + K + + + Sbjct: 61 ---DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGA-DGYILKDVPGKELIEAIK 116 Query: 129 LSLNGVRQATDR----LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 G R + L+ + + ++ E+ +LR +S G + +IA+++ +++T+ Sbjct: 117 KVAAGKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTV 176 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 HK N+ KL + S AGL+ A R Sbjct: 177 ETHKRNIKQKLMIDSTAGLVRYAIDHGLDR 206 >UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9 Tax=Clostridia RepID=B2A8K6_NATTJ Length = 228 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 31/218 (14%), Positives = 72/218 (33%), Gaps = 22/218 (10%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K + L + + G++ + + E D + + ++ + Sbjct: 8 KTIRILLADDHALFRQGLKKILDMEEDLA-VCGEAQNGEEVVDKVKLLKPNIILMDINMP 66 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ + P T+ + + + E L + +L T Q Sbjct: 67 ---LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPT-LVQA 122 Query: 127 LFLSLNGVRQATDRLNNQWYIN-----------------QSRTLSPTEREILRFMSRGYS 169 + G + ++ L+ E+EIL M++GY+ Sbjct: 123 IQEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYT 182 Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 +I+++L + KT++ H N++ K+ V+ + A Sbjct: 183 NKEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITA 220 >UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=A5V148_ROSS1 Length = 216 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 18/222 (8%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M+ S ++ ++E + G+ ++ E ++A+ R+ ++ Sbjct: 1 MQQSD---ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREAL-RLRPDIIL 56 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 G+ + + + + R +V+ D + + S+ + G L K + Sbjct: 57 MDVQMP---VMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAM-GYLLKDAPA 112 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSRT----------LSPTEREILRFMSRGYSM 170 E Q + G + ++ + LS ERE+L +++G S Sbjct: 113 EALLQTIRRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSN 172 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 +IA +L T++ H N+++KL + A Sbjct: 173 REIAGRLSITEGTVKNHVSNILAKLQAENRTQAANIARREGL 214 >UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria RepID=Q5NZX4_AZOSE Length = 211 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 12/206 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G++ E A+ + ++ S Sbjct: 2 IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVL-AAIKTCNAHVLLLDMSMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + + ++P LV++ L G ++K EI + Sbjct: 60 --LSGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGA-SGYVTKGKGREILLSAIR 116 Query: 129 LSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 +G R L + + L+ E +ILR + G S+TQIA +L + Sbjct: 117 KVASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSP 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207 KT+ HK M KL ++ LL+ A Sbjct: 177 KTVSTHKIRAMQKLHCQNNVELLKYA 202 >UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B502C9 Length = 229 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 10/216 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ + T +E+ + A V+ Sbjct: 3 LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELC-PDVVLMDLLMP-- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+S E+ P + + +A ++G++ + G L K + + + Sbjct: 60 -VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAI-GFLLKNAEADDLRNAVK 117 Query: 129 LSLNGVRQATDR-----LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + G + + + L+ E E+L ++RG + +IA L+ +T Sbjct: 118 AAAAGQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQT 177 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 ++ + ++++KLGV S A + E + Sbjct: 178 VKTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELT 213 >UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5E6_GEMAT Length = 213 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 8/210 (3%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + V L++ + G+ L R + T E+ + VI + Sbjct: 3 TRTRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTG-EAAVPLIEAERPDLVILDLNMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 +GL L + K TR LV++ D + +LS DG L K S + Sbjct: 62 G---IDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGA-DGYLLKDSMDDELFFA 117 Query: 127 LFLSLNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + L G R DR Q + +L+ ERE+L+ ++ G + + +AE L + T Sbjct: 118 IESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHT 177 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 H+ N+M KL V + L+ A + Sbjct: 178 ATRHRANLMQKLNVHNQVELVRIAASQGLI 207 >UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE Length = 239 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 10/217 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + L++ + G+ + ES A + ++ V+ Sbjct: 2 TPPIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHA-LAPDIVLTDIRM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ +FPR R LV++ D + ++S G + K + + + Sbjct: 61 P---AASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGA-RGYVLKDAPAQQLIE 116 Query: 126 ELFLSLNGVRQATDRLNNQWYI-----NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + G + L +R+L+P E +L+++S G S +IA + + Sbjct: 117 AIEAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 ++T+ H+ ++ KL + A L++ A + H Sbjct: 177 VRTVETHRLHLRRKLRIEGQAALMKYAVDHADLTHDP 213 >UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2 Tax=Alteromonadales RepID=B1KE04_SHEWM Length = 206 Score = 210 bits (535), Expect = 4e-53, Method: Composition-based stats. Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 10/209 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + +++ + G+ + +E+ + + V+ S Sbjct: 1 MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKM-PNLMPDIVLMDISMPEM 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ KFP + L+++ D + ++ L+ + G K + L Sbjct: 60 ---NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRG-VRGYALKDISAAEMFYALR 115 Query: 129 LSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + NG + +++ + L+ E+ +LR ++ G + ++A +L +++T Sbjct: 116 VIHNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRT 175 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLC 212 I H+ N+ KL + + AGL+ A Sbjct: 176 IETHRRNIKDKLAIKTSAGLVRYAIDHGL 204 >UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29 Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO Length = 248 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 35/233 (15%), Positives = 72/233 (30%), Gaps = 21/233 (9%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 V + + + G +L + +++ R+ V+ Sbjct: 20 DPPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRES-RRLRPDVVLMD 78 Query: 63 FSAMRSERREGLSCLTELAIK--FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 GL +A P LV+ D + + +L +L Sbjct: 79 IRMP---VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQP- 134 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYI--------------NQSRTLSPTEREILRFMSR 166 E + G + + + TL+ ER +L ++ Sbjct: 135 ENLLAAIRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIAN 194 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219 GYS +IA+ L ++ T++ H ++++KL A L+ AA + + Sbjct: 195 GYSNAEIAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLVAPGSAT 247 >UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP Length = 215 Score = 209 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 80/215 (37%), Gaps = 15/215 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFA-GNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + L + + GI+S+ + +E A+ + + + Sbjct: 2 IRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP- 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G++ + +L P + +V++ D A + + V+ K S+ + + + Sbjct: 61 --ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVV-KVSSADEIIEAI 117 Query: 128 FLSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 G +++ L+P E++IL+ ++ G+S +IA++ Sbjct: 118 KEVSAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEF 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 ++ T+ H+ N+M KL + A L+ A Sbjct: 178 GLSLNTVHVHRNNIMRKLDIHKQAELVRYAIKEGI 212 >UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH Length = 214 Score = 209 bits (534), Expect = 5e-53, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 8/216 (3%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 + + L++ + G L + + S ES A +R F V+ Sbjct: 3 QRQPPGPLTLLLVDDHAVVRAGYRRLLEQASRCWQVTEA-DSGESAYRACARERFDVVVM 61 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 S GL L L + P R L+ + + +L G ++K+S E Sbjct: 62 DISLPG---ISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQAL-SGGAAGYITKSSAPE 117 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLK 178 + + + G + + + +LS E EI R ++ G +IA L Sbjct: 118 VLVEAVQRIAAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLN 177 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 + KT+ + + KL +++ A + A ++ Sbjct: 178 ISYKTVANYGSGIREKLALNNVAEMTRLAIRAGVIK 213 >UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria RepID=Q5ZS73_LEGPH Length = 225 Score = 209 bits (533), Expect = 5e-53, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 13/216 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + +GI L + + +++ + S V+ Sbjct: 8 IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQAL-AYVKTHSPDVVLLDMKMPG- 65 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G L P + + + + L + G L+K S E + Sbjct: 66 --IDGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAM-GYLTKESGAEEMAAAIR 122 Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G + + + + + LS E +++ ++ G ++ IA++L + Sbjct: 123 KVAKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLS 182 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 KTI +++ + KLG+ +D L A + H Sbjct: 183 SKTINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHP 218 >UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A9E4_9BACT Length = 227 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 5/207 (2%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++ +V +++ + GI SL R +++E+F + + + + V+ S Sbjct: 1 MQPISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAF-ELVKQHNPDIVVADLSM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL + ++ TR +++ + + S VL K+ E Sbjct: 60 PG---VTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVL-KSDAFEDLVD 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 + G T + + + TLSP E+++L +S G S +I+ +L + KT+ Sbjct: 116 IIHRVHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVE 175 Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLC 212 H+ +M KL V+ L+ A Sbjct: 176 THRSRIMQKLNVTKATELVREAMRSGL 202 >UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae RepID=B8GSX5_THISH Length = 220 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 16/217 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFA---GNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +V L++ + +GI L + A G ++ +E+ +A R+ V+ + Sbjct: 2 IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEA-KRLKPDVVLMDINM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL + P + LV+ D + + + G L+K +E Sbjct: 61 PGIG---GLVATRRIVEAQPSVKVLVLTAMDEGP-VPRWVLEAGASGYLTKGCRIEEMIA 116 Query: 126 ELFLSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + ++ G R + + + N LS ER+IL + +G + IA L Sbjct: 117 AIQGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATAL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 + KT+ +K VM KLG+S+D L+ A + Sbjct: 177 NISPKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIA 213 >UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria RepID=Q09C30_STIAU Length = 213 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 17/217 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 N+ L++ + GI SL E + +S V+ R Sbjct: 2 INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDG-EEAVKRVRELSPDVVLMDVRMPRM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL L + + P R +++ D ++ ++ +L + G L K T + + Sbjct: 61 ---TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAG-VKGFLLKDVTRDQLADAIR 116 Query: 129 LSLNGVRQATDRLNNQ------------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 NG + + + L+ E E++R ++RG S +IA Sbjct: 117 RVANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATV 176 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 L T++ N+++KLGV + A L C+ Sbjct: 177 LGTAEGTVKNQTSNILAKLGVRDRTRAVLRAMELGCL 213 >UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1 Tax=Bacillus subtilis RepID=YXJL_BACSU Length = 218 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 29/218 (13%), Positives = 62/218 (28%), Gaps = 17/218 (7%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K VAL + + G + + ++ R Sbjct: 5 KIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDG-HDIIALAKQTKPDVILMDVQMPR 63 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G+ ++ P T+ +++ D E + + + G L K + E + Sbjct: 64 ---CSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAV-GYLLKDTLPEELIDAI 119 Query: 128 FLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + G + + + E E+L+ M+ G IAE Sbjct: 120 RAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAE 179 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +L + T++ H ++ K + A + Sbjct: 180 KLFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217 >UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67MG8_SYMTH Length = 197 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 18/202 (8%) Query: 27 LFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPR 86 + + E + + VI S G+ + P Sbjct: 1 MLQSEPDLELVGEAGRG-EEAVELTKALKPDVVIMDISLP---DMSGIEATRLIKEAVPE 56 Query: 87 TRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ-- 144 TR + + + E ++ L ++ +++ + + + G + Sbjct: 57 TRVIGLTMHEEEPFVLEFLRAGADAYIVKRSAAAD-LVGAIRAVMEGQAVLDPAVTRAVV 115 Query: 145 -----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193 + L+P EREIL ++ G + +IA +L + KT++ H+ N++ Sbjct: 116 EGYVSRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLD 175 Query: 194 KLGVSSDAGLLEAADILLCMRH 215 KLG+ L+ A + Sbjct: 176 KLGIHDRTELVRYAIRQGLVEP 197 >UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4 Tax=Cyanobacteria RepID=B0C955_ACAM1 Length = 215 Score = 209 bits (533), Expect = 6e-53, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 16/215 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + + G+ SL +++ + ++ Sbjct: 2 IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAIL-LTQTLQPDVILMDVRMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ E+ +FP R LV+ D + + SL L G L K++ + Sbjct: 59 -ICDGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGAL-GYLLKSTPASQLAAAIR 116 Query: 129 LSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + +G Q + + N LS E ++L + +G S +I++ L Sbjct: 117 MLHDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQIL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 T++ + ++ LGV A L Sbjct: 177 HLTEGTVKNYVSQLLGSLGVRDRTQAALWAQQYLS 211 >UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M8B3_9BACT Length = 212 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 7/214 (3%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K V L + ++ G+++ + E+ + + + Sbjct: 1 MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEA-WKLIEELKPDVALLDIRM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G++ + +++ D + ++ SL G + K ++ + Sbjct: 60 PG---ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGA-KGFVLKTTSAGALMK 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + G + + + + LSP ERE+L +RG S ++A QL + +T Sbjct: 116 AIQTVATGSLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERT 175 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 ++ H +V KLG + + A M E Sbjct: 176 VQTHLASVYDKLGAHNKTEAMLLALKHGLMTLEE 209 >UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus capsulatus RepID=Q60AR8_METCA Length = 215 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K V L++ + G L +E+ + ++ S Sbjct: 3 SKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEAC-QLYADTRPDVIVMDLSLP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GL+ + + + R LV + D ++ +L G ++K+ EI + Sbjct: 62 GIG---GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGA-RGYITKSCAPEILVEA 117 Query: 127 LFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + +G + + TLS E ++ +++GY+ ++AE+L Sbjct: 118 VARIASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEEL 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 + KT+ + + SKLGV++ A + A Sbjct: 178 RLGYKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212 >UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT Length = 212 Score = 209 bits (532), Expect = 7e-53, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 6/213 (2%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 + + L++ + G+ L + E + + Sbjct: 1 MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEA-DDAEQAVAHYRQHRPDVTLMD 59 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 G+ L + +FP R +++ D++ + +L + G L K+ Sbjct: 60 VRMPG---ASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAV-GYLLKSVRHAE 115 Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + G R L + R LSP E E L ++RG+S +I L Sbjct: 116 LFAAVRKVHAGERCVPQSLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTE 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +T +AH ++ KL + A ++AA +R Sbjct: 176 RTAKAHVQAILVKLEAADRAEAVDAAYKRGLLR 208 >UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11 Tax=Bacteria RepID=A9B4P1_HERA2 Length = 257 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 28/232 (12%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V +++ + G+ +S E +S V+ + Sbjct: 6 KVLMVDDHPLFRQGVRWALSSERDIKIIGE-GSSAEEGLVLISEHEPDVVLTDLNLPNM- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +GL + ++P ++++ + + +L SK + + L Sbjct: 64 --DGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYY-SKEISPKTLATVLRR 120 Query: 130 SLNGVRQATDRLNNQWYINQ-----------------------SRTLSPTEREILRFMSR 166 G D + + LS E E+L ++ Sbjct: 121 VARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIAS 180 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218 G + IA+ LK + +T++ H +++ KL ++ + A + T Sbjct: 181 GATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETPAT 232 >UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=Q12FM5_POLSJ Length = 224 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 45/219 (20%), Positives = 82/219 (37%), Gaps = 13/219 (5%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 R +K + +++ + G+ + E ++ + A I S Sbjct: 10 RQEKTRIMMVDDHPLVREGMARFLNLQGDLDLCCEAGS-VEEALAVVADCNPALAIIDIS 68 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----- 119 GL + L ++P L I+ D +L ++ K +T Sbjct: 69 LNGE---SGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILL 125 Query: 120 --LEIFHQELFLSLNGVRQATDRLN--NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + +++LS + + RL + LS E EIL + G+ Q+A+ Sbjct: 126 AVRRVLAGDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVAD 185 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +L R+IKTI H+ ++ KL + S A L+ A L R Sbjct: 186 KLNRSIKTIETHRASLKEKLQLKSGADLVRFAIQWLEDR 224 >UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5 Tax=Burkholderiaceae RepID=Q1LE49_RALME Length = 264 Score = 209 bits (532), Expect = 8e-53, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 84/216 (38%), Gaps = 17/216 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 +V ++E + G+ S+ G +E+ Q A+S ++ S Sbjct: 6 SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLC-PDLILMDLSLPGM- 63 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ + + + P R + ++ + + +L +DG + K ++ + + + Sbjct: 64 --NGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAG-VDGYVLKDTSFDDLVTAMRV 120 Query: 130 SLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 L G + + L L+ ER +L+ ++ G S Q+ + Sbjct: 121 VLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYM 180 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 + KTI ++ ++M KLG+++ L+ A + + Sbjct: 181 NLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216 >UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ASJ5_PELPD Length = 208 Score = 209 bits (532), Expect = 9e-53, Method: Composition-based stats. Identities = 29/207 (14%), Positives = 74/207 (35%), Gaps = 10/207 (4%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + + + G+ + +G +++ + V+ + Sbjct: 4 RILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQT-EVLRPDVVVMDIAMPE-- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ + + P + +V++ + + ++ L K S + Sbjct: 60 -LNGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARA-YLLKESAGSGLVDAVRA 117 Query: 130 SLNGVRQATDRLNNQWY----INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 + G + ++ + +LS ERE+++ + G + +IAE L + K+I Sbjct: 118 VIRGECYFGEGVDAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIE 177 Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLC 212 ++ +M KLGV + L++ A Sbjct: 178 TYRSRLMVKLGVGNIPALVKFALQHGI 204 >UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides RepID=D2BGT0_DEHSV Length = 232 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 17/211 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + K V + + + G+ L + QE+ D +++ V+ Sbjct: 1 MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEA-VDMVAQFKPDVVLMDIVM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 R G+ + P T L++ ++G L G L K++ + Sbjct: 60 PR---LTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGA-SGYLLKSAKSDEIVG 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGYSMTQI 173 + G + LSP E EIL+ S+G S +I Sbjct: 116 AIRAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREI 175 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204 A++L +++T++AH N+ +K+ S + Sbjct: 176 ADKLTLSMRTVKAHLSNIFNKMRCSCRTEAI 206 >UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3 Tax=Burkholderiales RepID=A2SLK8_METPP Length = 226 Score = 208 bits (531), Expect = 9e-53, Method: Composition-based stats. Identities = 42/227 (18%), Positives = 77/227 (33%), Gaps = 26/227 (11%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD----AMSRISFAAVIFSFS 64 V + + V+ GI+ + ++ A + V+ + Sbjct: 2 IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 +R+GL L L +FPR L+++ + SL G L+K++ E Sbjct: 62 MP---QRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAA-GYLNKSADSEQMI 117 Query: 125 QELFLSLNGVRQATDRLNNQWY------------------INQSRTLSPTEREILRFMSR 166 + G T + Q LS E ++ ++ Sbjct: 118 DAIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAA 177 Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 G S+ +IAEQL + T+ ++ ++ K GV +D L A M Sbjct: 178 GKSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELM 224 >UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA Length = 209 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 13/212 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + E + G+ +L + + + + ++ V+ S Sbjct: 4 RILIAEDQQLVRQGLVALLAV--DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPE-- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 +G+ + P+ R LV+ + E R+ +L+ L K E + Sbjct: 60 -LDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGE-LMAAINA 117 Query: 130 SLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 G L+ +L+ ERE+L+ ++RG+ +IA++L IK Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T+ H+ +M KL + + A L A + Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209 >UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=2 Tax=Actinomycetales RepID=C1RMQ2_9CELL Length = 254 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 22/233 (9%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 V +++ + GI ++ R G + + + A R+ + Sbjct: 8 SATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTA-RRLRPDVTLMDVQMP 66 Query: 67 RSERREGLSCLTELAIKF-PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124 +G+ + P T +V+ D + + +L G++ K + Sbjct: 67 GM---DGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGA-RGLVLKDAPTSELVA 122 Query: 125 -------QELFLSLNGVRQATDRLNNQW-----YINQSRTLSPTEREILRFMSRGYSMTQ 172 + LS + R+ + + + L+ ER++ R + +G S + Sbjct: 123 AIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAE 182 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM---RHCETSNVL 222 AE+L T+++H ++ KLGV + A + + Sbjct: 183 AAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVDRTSPPPGGGTV 235 >UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium RepID=Q89IF1_BRAJA Length = 217 Score = 208 bits (531), Expect = 1e-52, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 12/214 (5%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M +V L++ + G + + A V+ Sbjct: 1 MSEVAATGISVLLVDDHPIVRQGYRRVLESQGDLHVVAEA-DNAADAYGAFKAHDPDVVV 59 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 S GL + + + PR R LV + + + S G ++K+S Sbjct: 60 LDISMPG---ASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGA-SGFVTKSSEP 115 Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQS-------RTLSPTEREILRFMSRGYSMTQI 173 + G R +D + + + L E EILR + G + QI Sbjct: 116 SAVVNAIRSVARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQI 175 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207 A L ++KT++ + + + +K G +DA L+ A Sbjct: 176 ATHLNLSVKTVQNYHYLIKTKTGARTDAQLVRLA 209 >UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci RepID=Q9RU37_DEIRA Length = 225 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 10/216 (4%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 V L++ + G+ G +E+ Q+A R+ V+ Sbjct: 10 TTPTVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEA-ERLRPEVVVMDLM 68 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 +G++ EL + P T + + E ++ G++ + +L K ++ + Sbjct: 69 MP---VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYML-KDASSDTLA 124 Query: 125 QELFLSLNGVRQATDRLNNQW-----YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + + G + + +L+P E +L+ ++RG S IA + Sbjct: 125 DAIHAAARGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGV 184 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + T++ H ++SKLG+ S A Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALKYGIASL 220 >UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2 Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER Length = 220 Score = 208 bits (530), Expect = 1e-52, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 20/216 (9%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +V + + + G E H T E+++ + + V+ Sbjct: 2 IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQ-VRALRPDVVLMDIRMPHG 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL+ E+ +FP TR +VI D++ + +L G L K + E + Sbjct: 61 ---DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAA-GFLLKDADPEELSSAVL 116 Query: 129 LSLNGVRQATDRLNNQWY---------------INQSRTLSPTEREILRFMSRGYSMTQI 173 G + RL ++ LS E ++++ +S+G I Sbjct: 117 TVAEGGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDI 176 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 A+ L T+++H N+ KL V + ++ A Sbjct: 177 ADSLSLEQSTVKSHISNICKKLQVRTRVQIVIWAYR 212 >UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1 Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL Length = 216 Score = 208 bits (530), Expect = 2e-52, Method: Composition-based stats. Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 13/214 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + + I+ + R H + E A+ V+ Sbjct: 2 IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHA-ENAEHAVAAVREQEPDVVLMDLQMPGM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + L P+ + + +L G + K + + + + Sbjct: 61 G---GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGA-KGYVHKGADRDELIEAIR 116 Query: 129 LSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G R + +N L+P E E+L + G T IA+ L + Sbjct: 117 SVYLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KT+ ++ + +LGV +DA L A + Sbjct: 177 PKTVSTYRSRIFERLGVRNDAQLTRIAIDYGLLE 210 >UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales RepID=A0M4P6_GRAFK Length = 205 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 8/204 (3%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + E GI+ F + + + + R +I Sbjct: 2 IRLVIAEDHTALIDGIKVFFEYEEDIEFV-GFANNGQELIELTRRKKPNLIITDIRMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ E+ +FP + + + D + + L G + K S+L+ + Sbjct: 59 -VMDGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGA-SGYILKNSSLKELLYAIR 116 Query: 129 LSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185 G + L+ +REIL+ + +G + +IA+QL T+ Sbjct: 117 KVHEGEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVE 176 Query: 186 AHKFNVMSKLGVSSDAGLLEAADI 209 H+ N++ KLG+ LL A Sbjct: 177 THRKNMIRKLGLQGAGELLRYALE 200 >UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4 Tax=Alteromonadales RepID=Q15T22_PSEA6 Length = 214 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 13/213 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L++ + GI + G + T+ E + + V+ S Sbjct: 2 IKILLVDDHELVRTGIRRILEDVQGF-VVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL ++ TR +V++ + G L+K S + + Sbjct: 61 G---GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAF-GYLTKDSDPKEMELAIR 116 Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G + + + Q N +LS E EI +++G + IA+ L + Sbjct: 117 KVAAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNIS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KT+ H++ + KL VS+D L A + Sbjct: 177 AKTVNTHRYRMFEKLNVSTDVELTHLALRHKLI 209 >UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD Length = 205 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 8/207 (3%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + +++ + G++SL G T T+ + + Sbjct: 4 RILIVDDHPLVLEGLKSLLADAEGVQVV-GTATNAIEAIAFLKGNEVDIAFLDINLP--- 59 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ ++ +FP + L ++ + A + + G L K+S E + + Sbjct: 60 DISGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGA-SGYLIKSSGKEDILEAIAQ 118 Query: 130 SLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + + +T L+ E+E+L ++ G + QIAEQL ++ T+ + Sbjct: 119 VQAGGYFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNS 178 Query: 187 HKFNVMSKLGVSSDAGLLEAADILLCM 213 H+ N++ K VS+ A L++ A L + Sbjct: 179 HRQNLLIKFEVSNTASLIKLAAGLGLI 205 >UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DI56_9ACTO Length = 235 Score = 207 bits (529), Expect = 2e-52, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 8/214 (3%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + V + + + G+++ E+ ++ V+ + Sbjct: 3 EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEAL-ALIAAHEPDVVLLDLNMP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 S +G LT LA R + +V+ R+ +++ G L K + Q Sbjct: 62 GS---DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAA-GFLYKDIDPDSLAQA 117 Query: 127 LFLSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 + +G L+ ERE+L ++ G S +IA+QL KT Sbjct: 118 IRSVADGQVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKT 177 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 ++ H ++ KLGV+ A H E Sbjct: 178 VKTHLSSLFRKLGVADRTQAALYAVTHGMAGHTE 211 >UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD Length = 217 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 16/218 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + IG+ S F QE+ + + +S ++ Sbjct: 5 IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEA-VEMTAELSPDIILMDMLMP-- 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ + E+ + R + + + +L ++ + G L K ST + + + Sbjct: 62 -VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAM-GYLLKDSTPDELLEAIR 119 Query: 129 LSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177 G + + L+P E + L+ +++G S IAE++ Sbjct: 120 RVHRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEM 179 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 + T+R H +++SKL +++ A Sbjct: 180 FVSEATVRTHMTSILSKLHLANRVEATLYALREGIASL 217 >UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH LuxR domain; higly similar to B. subtilis Transcriptional regulatory protein degU (Protease production enhancer protein) n=1 Tax=Cupriavidus taiwanensis RepID=B3RA82_CUPTR Length = 223 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 10/214 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ G+ + E R + V+ Sbjct: 5 LRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAAS-VEEAIVLAGRHAPDLVVSDIHMP-- 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL A +FP R + ++ + + + + K + + Sbjct: 62 -DANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAF-ALGVAAYVLKEAPAHELVTAIR 119 Query: 129 LSLNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183 G L + + R L+P E +L+ ++ G S +IAE+L +++T Sbjct: 120 TVAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRT 179 Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 + H+ ++ KL V A L++ A + E Sbjct: 180 VETHRLHLRRKLRVGGRAELVKYAVHFSDLHPIE 213 >UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2 Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY Length = 210 Score = 207 bits (528), Expect = 2e-52, Method: Composition-based stats. Identities = 38/201 (18%), Positives = 79/201 (39%), Gaps = 7/201 (3%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 +ALI+ + GI +L + E+F D + R ++ Sbjct: 6 IRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAF-DLLQRTPVDILLMDV---GL 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL +L ++P + L+++ D + + SL G + K + + Sbjct: 62 RDINGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSL-AVGASGYVLKEAPSREIVAAIE 120 Query: 129 LSLNGVRQATDRLNNQW--YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + + + L+P ERE+L +++G + +A L+ +++T+ Sbjct: 121 AIAAGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVET 180 Query: 187 HKFNVMSKLGVSSDAGLLEAA 207 H+ ++ KL + A LL+ A Sbjct: 181 HRLSIRRKLAIDKPADLLKHA 201 >UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12 Tax=Proteobacteria RepID=B8ET67_METSB Length = 223 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 12/212 (5%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + L++ + G +L ++ E+++ ++ VI + Sbjct: 6 TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYR-LFKQVKPDLVIMDLTMPGLG 64 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G+ + + P R LV A + ++ G ++K+S E + F Sbjct: 65 ---GVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGA-KGYVTKSSPPEALIRGAFD 120 Query: 130 SLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 L G + ++++ + L+P E EILR + S IA L + K Sbjct: 121 VLQGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPK 180 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T+ ++ + +KLGV+SD L+ A + Sbjct: 181 TVANTRYLIKAKLGVASDIELVLVALRQGILG 212 >UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI00017452CB Length = 235 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 77/214 (35%), Gaps = 16/214 (7%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K+ +A ++ M G++ L T ++ + + + + S Sbjct: 18 KKKIAFVDDHTMLRDGLQKLVESQPDL-CCYWTASNTQDALQQLEQGKPDMLAVDISLPG 76 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 R GL + + P LVI+ D L G + K + Q + Sbjct: 77 ---RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGA-RGYVMKDAESTTLLQAI 132 Query: 128 FLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 L G R + ++ Q ++ + LS E E+ + +S G S QI + Sbjct: 133 RNVLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDA 192 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 L ++KT+ H+ ++ KL + A +L A Sbjct: 193 LNISVKTVEVHRAHIREKLKLEDGASVLRYAVRW 226 >UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D0L7_PELTS Length = 223 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 31/228 (13%), Positives = 84/228 (36%), Gaps = 18/228 (7%) Query: 1 MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60 M + + L++ + + LF + ++ E A++R+ ++ Sbjct: 1 MNEFLTSEIQLLLVDDDPLVRRSLRMLFELHD--INVVGEASNGEEALKAIARLKPTMIL 58 Query: 61 FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120 + + +G+ L + +P + +++ + +++ ++ + K S Sbjct: 59 MDVNMP---KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDG-CSAYVLKDSPP 114 Query: 121 EIFHQELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGY 168 E + + G + N + + L+ E+E+L+ + G Sbjct: 115 EQLIEVVESVAEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGL 174 Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 S +IA +L ++T++AH +++ KL V+ A ++ Sbjct: 175 SNKEIAGKLNITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQPP 222 >UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales RepID=A1RC88_ARTAT Length = 218 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 13/219 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRI----SFAAVIF 61 + V L++ + G+ ++ F G + + V+ Sbjct: 1 MSDIRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLM 60 Query: 62 SFSAMRSERREGLSCLTELAIK---FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 +G++ ++ P L++ D +A ++ ++ G + K + Sbjct: 61 DLQM--GSGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGA-SGYMLKDA 117 Query: 119 TLEIFHQELFLSLNGVRQATDRLNNQW---YINQSRTLSPTEREILRFMSRGYSMTQIAE 175 E Q + + G + + N S LS E ++L ++ G S +A+ Sbjct: 118 PPEQIRQAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAK 177 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 QL + T++ H ++ SKLGV + + A +R Sbjct: 178 QLFISEATVKTHLVHIYSKLGVDNRTAAIAVATQRRIIR 216 >UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2 Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN Length = 226 Score = 207 bits (527), Expect = 3e-52, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 16/222 (7%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 + + + + V +I+ + + ++ S++ V+ Sbjct: 12 QETPLDELRVLIIDDHALLGESLARFLGSN-DMQAVW--CGDLVEAMQSIRDRSWSVVLL 68 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 S R GL L + + P L+++ + + +L G L+K + + Sbjct: 69 DLSMPRG---NGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALR-GGAAGYLTKGCSPD 124 Query: 122 IFHQELFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQ 172 + + + ++G R T + Q LS E ++ + G S+ Q Sbjct: 125 VLVEAIQKVVHGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQ 184 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +A++L + KT+ HK +M KL + +DA L+ A + Sbjct: 185 VADELHISCKTVSTHKTRLMHKLALDNDADLVRYAMHQGIVS 226 >UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria RepID=Q8YV43_ANASP Length = 209 Score = 206 bits (526), Expect = 4e-52, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 6/206 (2%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ ++ + + E + Sbjct: 7 IRVLIADDHAIFRQGLATIINRDPEMQVVA-QAENGEQVIALFEEHQPDVTLMDLRMPE- 64 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 EG++ ++ + R +V+ D + + L G L K + + + Sbjct: 65 --VEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGA-KGYLLKETEPDELLNAIR 121 Query: 129 LSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187 G + + + + LS E E+LR +++G S IA+ L T+++H Sbjct: 122 TVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSH 181 Query: 188 KFNVMSKLGVSSDAGLLEAADILLCM 213 +++KL VS + A + Sbjct: 182 VNRILNKLDVSDRTQAVIVAVKRGIV 207 >UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2 Tax=Betaproteobacteria RepID=C6WV69_METML Length = 216 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 13/220 (5%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62 S+ K V + + + G++ + + + S+ ++ Sbjct: 2 MSKKPKIKVIIADDHAILRAGLKQILSETEDILVIAEA-QNANEAIKLGSQPEADVLLLD 60 Query: 63 FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122 S R G+ L + + L+++ + I +L G L K S Sbjct: 61 ISLP---DRSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAA-GYLCKQSASSE 116 Query: 123 FHQELFLSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIA 174 + G + T + LS E + ++ G S+T +A Sbjct: 117 LVNAIQTVARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +L ++KT+ ++ ++ K+ + +A L A + Sbjct: 177 NKLSLSVKTVSMYRARLLEKMQLKHNAELTHYAFKHNLVS 216 >UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7 Tax=cellular organisms RepID=A1VT42_POLNA Length = 224 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIFSFSA 65 + L++ G+ + E+ D + V+ S Sbjct: 5 IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ +FP LV++ + + ++ G + K + + Sbjct: 65 RGM---SGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGA-KGYVLKDAPAQELVN 120 Query: 126 ELFLSLNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + G + L + + L+P E L +++ GYS QIA +L + Sbjct: 121 AIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMS 180 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 ++T+ H+ N+ KL ++ A L++ A + Sbjct: 181 VRTVETHRLNLRRKLRITGQAELVKYAIDHML 212 >UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium thermophilum RepID=Q67QY5_SYMTH Length = 218 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 82/222 (36%), Gaps = 18/222 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ +M G+ S+ QE+ + + ++ V+ + Sbjct: 1 MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEAL-ELVPKLKPDLVLMDINMP-- 56 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ +L +P + +++ +I+ L ++ DG L K E L Sbjct: 57 -VLDGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGA-DGYLLKNLGPEELVSSLR 114 Query: 129 LSLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQ 176 +++G + + + + LSP E E+LR S G + +IA + Sbjct: 115 AAISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAK 174 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218 L T++ H +++ KL + + + + A + Sbjct: 175 LYVAESTVKNHMRHILEKLHLRNRSEAVGYAIRTGLAGEPPS 216 >UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae RepID=B9E7V9_MACCJ Length = 210 Score = 206 bits (525), Expect = 5e-52, Method: Composition-based stats. Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 9/214 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K+ ++ L++ + G++ L A +E + +I Sbjct: 1 MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ + K+P + LV++ E ++G + DG K S + Sbjct: 61 PE---LNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGA-DGYEMKDSEPKALIN 116 Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + G + + + + LS E E+L+ MS G + +IAE+L + Sbjct: 117 TIKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KT++ H ++ +KL V + Sbjct: 177 EKTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210 >UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NNP3_9RHOB Length = 205 Score = 206 bits (525), Expect = 6e-52, Method: Composition-based stats. Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 12/209 (5%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71 L + + GI + +K A +E+ A + ++ S Sbjct: 1 MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHD-LRPDVLLMDVSMP---VM 56 Query: 72 EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131 GL T++ P L+++ D + G + +L S E + Sbjct: 57 NGLEAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAE-MITAITSVA 115 Query: 132 NGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 +G + + + L+ ER++L ++RG ++A++L +++T+ Sbjct: 116 SGGYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTV 175 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +H+ N+ K+G + A L + A L + Sbjct: 176 ESHRLNLREKVGNKNAAQLYKVAQDLGLL 204 >UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2 Tax=Flexibacteraceae RepID=C6W5G0_DYAFD Length = 219 Score = 205 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 78/224 (34%), Gaps = 20/224 (8%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + + + + G S+ + L QE D + + V Sbjct: 1 MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQE-LLDRLPANTPDIVFMDLQM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ +FP + +V++ + + +I L + G L K ++ + + Sbjct: 60 P---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKG-VQGYLLKDTSPDEVEK 115 Query: 126 ELFLSLNGVRQATDRLNNQW---------------YINQSRTLSPTEREILRFMSRGYSM 170 + D ++ + LS E+E+L+ + G S Sbjct: 116 AIRRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLST 175 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T+I ++L +++T+ H+ V+ K G S A + A + Sbjct: 176 TEIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAYKNQLLS 219 >UniRef50_A3Y699 Putative two component system response regulator n=1 Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM Length = 226 Score = 205 bits (524), Expect = 6e-52, Method: Composition-based stats. Identities = 32/220 (14%), Positives = 81/220 (36%), Gaps = 19/220 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + +++ + G+ + + E+ + A I ++ Sbjct: 3 IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYI-PDLILMDIRMPEM 61 Query: 69 ERREGLSCLTELAIKFP-RTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +GLS + + +TR ++++ D++ + +L G + K + + + Sbjct: 62 ---DGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGA-SGFILKDTPPDELVAAV 117 Query: 128 FLSLNGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIA 174 + G T + + L+ E+EIL+ ++ G++ ++IA Sbjct: 118 HVVAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIA 177 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +L T++ H +++SKL + A + A +R Sbjct: 178 SRLFIGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIR 217 >UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT Length = 211 Score = 205 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 13/208 (6%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 + + + + G+ LF G + E + V+ Sbjct: 4 RLIVTDDHELVRAGLLQLFEGAPGIEVVGEAV-NGEELMRKLQATQVDLVLLDLDMPGE- 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 G + + + +P L+++ D + ++ G + K + + + + Sbjct: 62 --NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGA-SGYICKDCSPKTLLEAIHK 118 Query: 130 SLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + + + + N LS E+EI R + G S I+ QL + Sbjct: 119 VVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISD 178 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +T+ AHK N+++KLG+ + L+ + Sbjct: 179 RTVSAHKINLLNKLGLKNVVELVHYSIQ 206 >UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1 Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5 Length = 212 Score = 205 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 19/211 (9%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K V + + + G+ S+ N + +E+ Q A + V+ Sbjct: 1 MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMAC-NLLPDLVLMDIQM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ ++ K ++I + + + ++ G + K + E + Sbjct: 60 P---DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGA-RGYVLKDAEKEDILR 115 Query: 126 ELFLSLNGVRQATDRLNNQW--------------YINQSRTLSPTEREILRFMSRGYSMT 171 + G + + ++ L+ E E+L +S+G S + Sbjct: 116 AVRAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNS 175 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202 ++AE L + KT+ + N+++KL VS Sbjct: 176 EVAETLGLSNKTVYNYVANILNKLQVSDRQE 206 >UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC 23134 RepID=A1ZEE6_9SPHI Length = 213 Score = 205 bits (524), Expect = 7e-52, Method: Composition-based stats. Identities = 31/212 (14%), Positives = 75/212 (35%), Gaps = 15/212 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 ++E + G++ L K+A + + V+ + Sbjct: 2 ITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL+ ++ K+P + +++ E ++ + DG K + + Sbjct: 62 ---DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGA-DGYFHKDTEESELIMGIK 117 Query: 129 LSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 NG + ++ TL+ E+E+L + G +I ++L Sbjct: 118 KIYNGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKL 177 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + +T+ H+ N++ K G+ + L++ A Sbjct: 178 CISTRTVENHRANILRKFGLKNTVELVKFAIE 209 >UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1 Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH Length = 209 Score = 205 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 11/207 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ G+++ G T + E +++++ + Sbjct: 2 IQVYLVDDHPFVLQGLKAYLNTREGIEIV-GTSGNGEKAIKEIAKLNPEVAVVDLRLPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ E+ K P T ++++ + E +I ++ L + K S E + + Sbjct: 60 --LNGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALS-YVMKDSRPEKLVEAIK 116 Query: 129 LSLNGVRQATDRLNNQ------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G T + + ++ L+P E+E+L + RG S IA+ L + Sbjct: 117 AARRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISET 176 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209 T++ H N++ KL V + A Sbjct: 177 TVKTHVSNILKKLDVKDRTQAVIKAIE 203 >UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DD36_PECCP Length = 218 Score = 205 bits (524), Expect = 8e-52, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 10/213 (4%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 NVAL++ ++ G L ++ +++ + + + + Sbjct: 9 TMINVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQ-PIDVAVIDIAMP 67 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 GLS LT L + P+ R ++++ D A + +L G L+K E Q Sbjct: 68 ---DESGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGA-GGYLTKRCGPEELVQA 123 Query: 127 LFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 + + +G + Q + L+P EREI + G S+ IAEQL+ + Sbjct: 124 VRVVSSGGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSH 183 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KT+ H+ N++SKL S L+ A + Sbjct: 184 KTVHVHRANILSKLQCESTVELVHFALQHQLLA 216 >UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=B9XAM6_9BACT Length = 209 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 6/207 (2%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 K + + + + +G+ +L ++ + ++ + + Sbjct: 6 KIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQAL-ELFAKCNPDLALMDLRMP- 63 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 + G+ E+ +F L++ D + + +L G + K+ST E L Sbjct: 64 --VKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGA-QGYVLKSSTGEKLIPAL 120 Query: 128 FLSLNGVRQATDRLNNQWY-INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G R + N+ N LSP E ++L ++RG + +IA+ L T + Sbjct: 121 RAVAAGQRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180 Query: 187 HKFNVMSKLGVSSDAGLLEAADILLCM 213 H ++++KL V+ + A + Sbjct: 181 HLKSILAKLRVADRTEAVTVALQRGII 207 >UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QJ84_DESAH Length = 218 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 16/220 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + L++ + ++ + ++ + VI + Sbjct: 4 NPITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHC-PNIVIMDINMP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ ++ K P + + ++ E + + G L K S+LE H Sbjct: 63 ---DLNGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGA-KGFLLKTSSLEDLHTA 118 Query: 127 LFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAE 175 + + +G N + + L+ ER +++ ++ GY+ +I+E Sbjct: 119 ILMVASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISE 178 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +L + +T+ H+ N M+KL + + AGL A + Sbjct: 179 KLNISKRTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLITL 218 >UniRef50_C6VXD5 Two component transcriptional regulator, LuxR family n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXD5_DYAFD Length = 220 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 27/224 (12%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + +++ + GI +L + D + ++ ++ + R Sbjct: 2 PIRILVVDDHSVVRQGIITLLEDEEDLIIAGEASDG-DEVWDMVEKVKPDVILLDLTMPR 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 GL + ++ FP + LV + + ++ S G L K ++ E + + Sbjct: 61 MP---GLEVIRQIVPVFPSAKILVFSMHNNTDYVLSSALNGA-SGYLEKDTSREEMLRAI 116 Query: 128 FLSLNGVRQATDRLNNQWYINQSRTL----------------------SPTEREILRFMS 165 G ++ N + L +P E++IL+ ++ Sbjct: 117 RAIAKGDLYFPPYASSVIIKNLLKQLARVPDTRAAQEEVQEKSIWKIITPREQQILKCLT 176 Query: 166 RGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 G S IAE+ + T+ + ++M K V + A L+ A Sbjct: 177 EGMSSKDIAEKFDISSNTVANQRASIMKKANVRNTAELISLAMK 220 >UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1 Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO Length = 210 Score = 205 bits (523), Expect = 8e-52, Method: Composition-based stats. Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 14/210 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G+ + + T+ + + V+ S Sbjct: 2 TRIIIADDHTIFREGLRQILAEANDFTLVGEA-TNGDDLLVRLREAPCDIVLLDLSMPG- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G++ + R +V++ + ++ +L DG ++K S + + Sbjct: 60 --ISGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGA-DGYVTKNSASDQLIAAIR 116 Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G + + + + L+ ERE+ + G+ +++IA L Sbjct: 117 KVSQGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDL 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +IKT+ HK N+++K+ + A L+ A Sbjct: 177 SIKTVSTHKTNLLAKMDAETTADLVRYALR 206 >UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1 Length = 219 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 20/216 (9%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + V GI+SL A ++ + ++ +I Sbjct: 5 IRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADAL-EVVTATKPDLLIVDIRMP-- 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ + +L + + ++++ + E ++ S+ DG L K S+ E F + L Sbjct: 62 -NLTGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGA-DGYLLKGSSKEEFLKALH 119 Query: 129 LSLNGVRQATDRLNNQWYI---------NQSRTL------SPTEREILRFMSRGYSMTQI 173 +G + + +++ +TL + E+EIL + G +I Sbjct: 120 AVSSGGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEI 179 Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 AE L+ + +T H+FN+M KL V + L A Sbjct: 180 AEALEISKRTAEVHRFNLMKKLKVKNLMELSNKAAE 215 >UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZFU2_9SPHI Length = 219 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 32/215 (14%), Positives = 80/215 (37%), Gaps = 15/215 (6%) Query: 3 HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA-MSRISFAAVIF 61 +K V + + M G+E+L + Y +F+ ++++ + Sbjct: 1 MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 ++GL ++ ++P + L++ + E+ + + + G + K Sbjct: 61 DVDMP---VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKE-IIAAGASGYILKNRGAS 116 Query: 122 IFHQELFLSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171 + G + + + + N L+ E+E+L + +G + Sbjct: 117 ELVNAIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTK 176 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 +I++QL T+ H+ N++ KL V + L+ Sbjct: 177 EISKQLFIADTTVETHRRNLIDKLEVKNSKELILY 211 >UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2 Tax=Acidobacteria RepID=Q021D5_SOLUE Length = 210 Score = 205 bits (523), Expect = 9e-52, Method: Composition-based stats. Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 7/210 (3%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 +V L++ + G + ++ + V+ F+ Sbjct: 4 APISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQA-VQLAGELHPRVVVMDFAMP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G + P T L+++ + + L + G L K + Sbjct: 63 SM---NGAVAARHILRTAPETAILILSMHAEASYVRTCLEAG-VRGYLLKNALDLEMVAA 118 Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184 + G + RL + + L+ E E+L+ + G S +IA L + T+ Sbjct: 119 VKQVAAGKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178 Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 H+ N+M LG+ + A L+ A + Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLVS 208 >UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD Length = 218 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 17/212 (8%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V + + + G++++ + +G L + E R++ + S Sbjct: 6 TVVIADDHALVREGLKTILKSQSGIS-VLGMAENGEEAVRLCRRLNPDVALMDLSMP--- 61 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 + G+ + EL+ + +T+ L + + +L G + K S+ + + Sbjct: 62 IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGA-SGYVLKTSSSKELVMAIET 119 Query: 130 SLNGVRQATDRLNNQWYI-----------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + G ++ + + +L+ ERE+L+ + GY +IA+ L Sbjct: 120 VMQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLV 179 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 ++KT+ H+ N M KLG+ S A L ++ L Sbjct: 180 ISVKTVEKHRSNFMKKLGLRSKAELKAYSEEL 211 >UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=C1TL62_9BACT Length = 217 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 14/222 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++K + LI+ + G++ L + E + R V+ Sbjct: 1 MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGL-ALIKRSRPDVVLLDIGM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ + EL T+ + I + E +L LS + G + K+S Sbjct: 60 P---NLDGIGLIRELRSTEQNTKFVAITAFNDERKLSE-LSSVGVHGFVLKSSGRTELLS 115 Query: 126 ELFLSLNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + G ++ Q + L+ E+E+L ++++G S +I+ + Sbjct: 116 AIRSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAK 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218 + + KT++ H +++ KL + A + E Sbjct: 176 MNLSEKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAESSEE 217 >UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1 Length = 213 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 42/217 (19%), Positives = 87/217 (40%), Gaps = 14/217 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + + N+ + + M GI SL + E+ + + + +I S Sbjct: 1 MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEAL-EIIKKGVVDFIILDISM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ L + P + L+++ ++ L ++G L K + E + Sbjct: 60 PEM---DGIELSKILKKQHPNVKILIVSTHSN-VMIVSRLIRIGVNGYLLKNAAKEELLK 115 Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQ 176 + +G + L + N S+ LS E+EIL ++ Y+ +IAE+ Sbjct: 116 AINTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEK 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 ++ T+ H+ N++SKL + AGL++ A + Sbjct: 176 TFISLNTVNTHRRNLLSKLNAKNTAGLVKYAVENGLV 212 >UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2 Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM Length = 214 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 12/213 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G SL L +++ S VI + Sbjct: 1 MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAY-SLCQSDSPDVVIMDVNM--- 56 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 + G+ + K P TR L + D + +L G ++K+ T EI + + Sbjct: 57 QGISGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGA-KGYITKSCTPEILIEAVK 115 Query: 129 LSLNGVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G L + +++ ++ E EI +++G ++ +I+EQL + Sbjct: 116 KVSAGQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISS 175 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 KT+ + + SKL + S A L+ A ++ Sbjct: 176 KTVSNYTAILKSKLNIGSTAELVHLAIETGLVK 208 >UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2 Tax=Geobacter RepID=B5EEC0_GEOBB Length = 216 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 13/218 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + VM G+ +L + + + + V+ S Sbjct: 3 IRIILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENM-PDVVVLDLSMPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G + + K P ++++ +I +L +L + + + + Sbjct: 62 ---NGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWA-FQELVTAVR 117 Query: 129 LSLNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + RL++ + +L+P E + R + G + +I +LK + Sbjct: 118 CVFKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKIS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218 KT+ ++ VM KL +S+ A L+ A + E+ Sbjct: 178 SKTVETYRLKVMKKLNISNIAQLVNHAVQEGIVGRPES 215 >UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3 Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE Length = 210 Score = 205 bits (522), Expect = 1e-51, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 13/214 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + M G+ + T Q+ + + ++ S Sbjct: 2 LRILLADDHAMFRSGLRRILEAEFPGASVGEAAT-IADVQERLGAQPWDVLLLDISMAGQ 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 L L + PR +V++ +I +L L+K E + + Sbjct: 61 NSLN---ALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGA-SAYLTKERAPEELIRAIR 116 Query: 129 LSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 L G R D L Q + LSP E EI ++ S+++IAE+L+ + Sbjct: 117 SVLAGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLS 176 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 +KT+ ++ ++ K+ + S+A L++ A + Sbjct: 177 VKTVSTYRGRILEKMALRSNAELMQYAVRHGLVG 210 >UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24 Tax=Gammaproteobacteria RepID=C6C961_DICDC Length = 211 Score = 204 bits (521), Expect = 1e-51, Method: Composition-based stats. Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 10/213 (4%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + NVALI+ ++ G L ++ ++ + +++ + + Sbjct: 1 MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLL-KLNVDVAVMDIAM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GLS L L K P R ++++ D A + +L G L+K E Q Sbjct: 60 P---DESGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGAC-GYLTKRCGPEELVQ 115 Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + G +++ L+P EREI + G S+ IAEQL + Sbjct: 116 AVRAVHAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLS 175 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 KT+ H+ NV+ KL ++ L+ A + Sbjct: 176 HKTVHVHRANVLDKLHCATTVELVHFALQHQLL 208 >UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=2 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MRK0_SACVD Length = 226 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 15/224 (6%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRI-----SFAA 58 + + V +++ + G+ + QE+ R Sbjct: 6 TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65 Query: 59 VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 V+ R +G+ + +P + +V+ R+ +LS G + K + Sbjct: 66 VLMDLQMPR---LDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAA-GYVLKDA 121 Query: 119 TLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172 E + ++ G + + L+ ER+IL + +G S + Sbjct: 122 EPEEVATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNRE 181 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216 IA++L + +T R H NV+SKL +SS A + Sbjct: 182 IADRLVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVSPP 225 >UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ Length = 214 Score = 204 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 10/212 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ G + + + + ++ FS Sbjct: 3 IRVIVADDHPLIIFGVRQALASAPGIRVVADAPDPG-ALTELLRNVPCDVLVTDFSMPCG 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL+ LT L +FP R +V+ A L+ S+ + G+++K L + Sbjct: 62 ATPDGLAMLTSLRQRFPHVRVVVLTML-ENAGLMVSMQDVGVLGIVNKRDDLSELPAVIA 120 Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + R + ++ + +R LSP E E++R G S +++A L R+ Sbjct: 121 AAFRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRS 180 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 I TI K N M KLGVS+DA L + A Sbjct: 181 INTISTQKTNAMRKLGVSNDAELFDYAQKHGL 212 >UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2 Tax=Bacillales RepID=C4L5Q6_EXISA Length = 230 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 28/233 (12%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 + + +A+++ + G++ +F T +E+ +I + Sbjct: 2 EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREA-IRIAGEQKPEILIMDIN 60 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 G+ +L++ P TR L+++ D E+ + +L G L K Sbjct: 61 MP---DMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGA-SGFLLKEVASTELI 116 Query: 125 QELFLSLNGVRQATDRLN-----------------------NQWYINQSRTLSPTEREIL 161 + ++ ++ + LS E E+L Sbjct: 117 SAVRAVAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVL 176 Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 ++ G S I++ L + KT++ H +V+ K+ V+ + A + Sbjct: 177 HLLADGRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229 >UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A2L6_9BACT Length = 240 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 7/215 (3%) Query: 2 EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61 + R + VA+ + + GIE+L R Y T + + + R ++ Sbjct: 14 QQERNRPVTVAIADDHHVVRQGIEALLRMCPDMEYVGGAST-VDEARQLVHRTRPDVLVS 72 Query: 62 SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121 S G+ L L + P TR +V+ + + ++K + Sbjct: 73 DLSMPGG---SGVGFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGA-HAFVAKDDAFD 128 Query: 122 IFHQELFLSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 + +G R + ++ L+P ERE+L+ +++G S +I QL Sbjct: 129 TLVSIIRRVHSGEEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFL 188 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 + KT+ ++ +M K V+ L+ A + Sbjct: 189 SPKTVEVYRGRLMKKFNVTKGTELIHHAVASGIVP 223 >UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2 Tax=Desulfuromonadales RepID=A1ATT6_PELPD Length = 203 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + VM G+ +L + + + + + + Sbjct: 2 IRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATAL-ELIRSLEPDIAVLDITMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 + +G+S + TR +++ D ++S G + K E L Sbjct: 59 -KLDGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGA-HGFILKDDAYEELLSALR 116 Query: 129 LSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186 G + + + L+ EREIL ++ G + IA+ L +IKT+ Sbjct: 117 TVAAGGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNN 176 Query: 187 HKFNVMSKLGVSSDAGLLEA 206 H+ N+M KL + S A L+ Sbjct: 177 HRTNLMGKLNLHSTAELVRY 196 >UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JFN7_9BACT Length = 220 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 21/222 (9%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + + L + + G+++L + QE+ +A R+ V+ + Sbjct: 4 RIQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEAL-EACRRLRPQIVLMDLNMP- 61 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 +G++ + + P L + D + R+ +L G L K + + + + Sbjct: 62 --VMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAG-SSGYLLKDTPSKQLVEAI 118 Query: 128 FLSLNGVRQATDRLNNQWYIN----------------QSRTLSPTEREILRFMSRGYSMT 171 +G + ++ LS E ++L ++SRG S Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +IA L T++ H NV+ KLGV A L + Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220 >UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes RepID=VRAR_STAA1 Length = 209 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 11/211 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V ++ M IGI S + + +E+ A + ++ Sbjct: 3 IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHE-LKPDLILMDLLM--- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 E +G+ T++ P+ + L++ + + +L +D + K ++ + + Sbjct: 59 EDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAG-VDSYILKTTSAKDIADAVR 117 Query: 129 LSLNGVRQATDRL------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182 + G + + L+ E EIL +++GYS +IA IK Sbjct: 118 KTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIK 177 Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 T++ H N++SKL V + A + Sbjct: 178 TVKTHVSNILSKLEVQDRTQAVIYAFQHNLI 208 >UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCN0_METPP Length = 210 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 12/210 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G + L + E+ + A V+ Sbjct: 3 IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQW-RALRPAVVVIDLGLPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL + L + R L + + +L L G ++K+S + Sbjct: 62 G---GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGAL-GYVTKSSAPSQLVAAVR 117 Query: 129 LSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G R + ++ + + + LSP E E++R + G + +IA+ L ++ Sbjct: 118 EVNQGRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSV 177 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 KT+ + + SKLG +SD L A Sbjct: 178 KTVHNVHYQIKSKLGTASDFELARMAWQRG 207 >UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein n=29 Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD Length = 261 Score = 204 bits (520), Expect = 2e-51, Method: Composition-based stats. Identities = 39/220 (17%), Positives = 82/220 (37%), Gaps = 20/220 (9%) Query: 11 VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70 V +++ + G + + + E+++ +++ + V+ Sbjct: 45 VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLA-LRPQVVLMDIRMP---V 100 Query: 71 REGLSCLTELA--IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G++ ++ +TR LV+ DI+ + +L G + K + + + + Sbjct: 101 EDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGA-SGFMLKDAEPDDIVRAVR 159 Query: 129 LSLNG-------------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 G + R L+ EREILRF++RG S +IA+ Sbjct: 160 TVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIAD 219 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L + T++ H +M KL A L+ AA ++ Sbjct: 220 DLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQP 259 >UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Tax=Gammaproteobacteria RepID=UHPA_ECO57 Length = 196 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 8/197 (4%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 VALI+ ++ G L + +E+ R I S Sbjct: 2 ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG-VQVCICDISMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL L++L ++++ D A + +L+ G LSK + + + Sbjct: 59 -DISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGA-RGFLSKRCSPDELIAAVH 113 Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188 G T + + + L+ ER++ +++G ++ +IA +L + KT+ H+ Sbjct: 114 TVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173 Query: 189 FNVMSKLGVSSDAGLLE 205 N+M KLGVS+D L Sbjct: 174 ANLMEKLGVSNDVELAR 190 >UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae RepID=C0ZBD9_BREBN Length = 215 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 13/217 (5%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 + V + + M+ + I SL +E+F +I V+ + Sbjct: 1 MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFL-LCGQIQPDLVLMDINM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE---- 121 + GL E+ +P + ++++ D A LI ++ +L + Sbjct: 60 P---KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINY 116 Query: 122 ---IFHQELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQ 176 + ++ L+ + R + ++ L+P EREI+ ++ G + +I+E Sbjct: 117 LHALLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEA 176 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 L T++ H N++ KL +++ L A + Sbjct: 177 LIIAENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213 >UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT Length = 237 Score = 204 bits (519), Expect = 3e-51, Method: Composition-based stats. Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 K + ++ + G + + T+ + V+ + Sbjct: 14 AKYRLLFVDDHPVVLDGYSLMLKSQPDLD-ICGLATNAGDAVQLFEKEHPDLVVMDLNLP 72 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 R GL + +L P R LV + D SL G ++K + + Sbjct: 73 G---RSGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGA-KGYVTKDCSAALLLTA 128 Query: 127 LFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + L G ++RL + + LS E E+ G + +I Sbjct: 129 IRRVLGGNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGA 188 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 +L + KT+ H+ ++ K+ + A ++ A + + Sbjct: 189 KLNLSPKTVSVHRDHIKQKMEFGTSAEMIRQAVRWVESQP 228 >UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA Length = 218 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 38/221 (17%), Positives = 83/221 (37%), Gaps = 22/221 (9%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + GI +L + A +E+ + ++ + V+ Sbjct: 3 IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREAL-ELVASLDPDVVLMDVMMP-- 59 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G+ +LA + PR +++ + R++ S++ G L K + + Sbjct: 60 -VMDGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGA-RGYLLKDVDHRVLADSIR 117 Query: 129 LSLNGVRQATDRL-----------------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171 G ++ + + + L+P ER+ILR +++GY+ Sbjct: 118 TVAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQ 177 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 +I EQL ++ T++ H + +KL V A L Sbjct: 178 EIGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHLL 218 >UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria RepID=D1CF52_THET1 Length = 1648 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 13/212 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + GI+SL G QE+ + + +S V+ S Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEA-VELVHNLSPDLVLMDLSMPVM 1496 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE------- 121 GL + ++ P + +V+ + + L ++ + + E Sbjct: 1497 G---GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRN 1553 Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGY-SMTQIAEQLKRN 180 + E ++ + D + + + L+ E+EIL+ + G S ++ QL + Sbjct: 1554 VIRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVS 1613 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 T++ H N++SKL + S A ++ A Sbjct: 1614 EHTVKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645 >UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG Length = 210 Score = 203 bits (518), Expect = 3e-51, Method: Composition-based stats. Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 13/213 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + G++ + +E + + + VI + Sbjct: 3 TRILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKE-LLNKIQANDYDMVILDITMPG- 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 R GL LTE+ P+ LV++ E + + G L+K S L Sbjct: 61 --RNGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAA-GYLNKGSASNELLDALH 117 Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G + + L + ++LS E +++ ++ G ++ +IA +L + Sbjct: 118 KISMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +KT+ ++ +++ KL + ++A L + Sbjct: 178 VKTVSTYRAHILRKLNMKNNAELTRFVIENKLI 210 >UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89 Tax=Bacteria RepID=C7Q6M6_CATAD Length = 225 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 15/218 (6%) Query: 5 RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64 R + V + + M G+ + G E + A + + ++ Sbjct: 4 RPEVIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERA-AELEPDVILLDLV 62 Query: 65 AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124 +G+ + L R LV+ +I ++ G + K Sbjct: 63 MPG---VDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGA-RGYVYKDVDPAALA 118 Query: 125 QELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIA 174 + G + + Q+ L+ ERE+L +++G + +IA Sbjct: 119 AAVRSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIA 178 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 L KT++ H N++ KLGV+ A Sbjct: 179 RALVLAEKTVKTHVSNILMKLGVADRTQAALWAVRHGI 216 >UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales RepID=A4XCA4_SALTO Length = 235 Score = 203 bits (518), Expect = 4e-51, Method: Composition-based stats. Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 18/217 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + + + + + E + V+ Sbjct: 3 IEVLVVDDQPLVRSALRMVVAEVDDM-VIAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ ++ P TR LV+ D + + G+L G L K +L+ + Sbjct: 62 G---GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAA-GFLIKNMSLDDILDAVR 117 Query: 129 LSLNGVRQATDRLNNQW-------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175 +G + + ++ ERE+L + RG S ++IA+ Sbjct: 118 TVAHGNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIAD 177 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 +L+ + T++ + ++SKLG L+ AA Sbjct: 178 ELRLSHATVKTYITRLLSKLGARDRVHLVIAAYEAGL 214 >UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2 Tax=Proteobacteria RepID=C5V4R9_9PROT Length = 211 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + + + + GI+ + + + E + ++F ++ S Sbjct: 2 IRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG- 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+S +T++ ++P L+ + + ++ G ++K S EI + + Sbjct: 61 --VTGMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAA-GFIAKDSDPEILLEAIR 117 Query: 129 LSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180 G L Q + LS E EI + G + IA L + Sbjct: 118 RVAAGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNIS 177 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 KT+ HK N+++K+ + S A L+ A Sbjct: 178 NKTVSTHKLNLITKMKLHSTADLVHYALEHKL 209 >UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1 Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM Length = 223 Score = 203 bits (517), Expect = 4e-51, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 16/217 (7%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + L++ + G + L + +S + + VI + Sbjct: 3 SPIKILLVDDHPLVRAGFQRLLISDESIEIVGEA-DNGQSACEMYASHMPDVVIMDLNMP 61 Query: 67 RSERRE--------GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118 E GL + + P+ + LV+ +I+ ++ G L+K Sbjct: 62 SDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGA-KGFLTKRC 120 Query: 119 TLEIFHQELFLSLNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172 + + + G T+ + +L+ E +I ++ G +++ Sbjct: 121 APDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSI 180 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +AE++ + KT+ AH+ N+ KL +S+++ L+ A Sbjct: 181 VAEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIR 217 >UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio RepID=C9QDP7_VIBOR Length = 209 Score = 203 bits (517), Expect = 5e-51, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + + G++S + T E+ + + + ++ + Sbjct: 2 IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLE-LKPDVLLLDINMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 G+ L +LA T ++++ D ++ S+ G + K E + Sbjct: 59 -NLNGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGA-KGYVLKDVGSEELVMAIN 116 Query: 129 LSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181 G + +++ + TLS E ++L+ ++ G +IA+ L ++ Sbjct: 117 QVAQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISV 176 Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +T+ H+ + KLG +S A L++ A + Sbjct: 177 RTVETHRLRIKKKLGATSTAALVKLALQKGLV 208 >UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SMK1_9BACT Length = 219 Score = 202 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 16/216 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +K +V +I+ + G+ + + A + + I +I S Sbjct: 1 MKNYSVFIIDDHAVVREGLAMVINQEADME-VCGSADDGPVALQKLFNIEPDIIIVDLSL 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +GL + + ++P LV++ + + G + K+ + + Sbjct: 60 ---TTSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGA-SGYVMKSEKPSVIIE 115 Query: 126 ELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174 L + G ++++ N + L+ E ++ + + G++ QIA Sbjct: 116 ALRKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIA 175 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210 +L ++KTI A + ++ KLG+ S L + A Sbjct: 176 TKLNLSVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211 >UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI Length = 218 Score = 202 bits (516), Expect = 5e-51, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 24/218 (11%) Query: 12 ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS-----FAAVIFSFSAM 66 L++ + GI L + G +E ++ S Sbjct: 1 MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ ++ + R L+++ + E ++ S+ +L +S+ + + Sbjct: 61 GM---SGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSS-DEMIKA 116 Query: 127 LFLSLNGVRQATDRLNN---------------QWYINQSRTLSPTEREILRFMSRGYSMT 171 + +G + + + + + LS E+EIL+F+ G S Sbjct: 117 IRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSR 176 Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 +IAE+L+ +++T+ H+ N+M +L V + A L+ A Sbjct: 177 EIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVE 214 >UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5 Tax=Desulfovibrio RepID=A1VB77_DESVV Length = 216 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 16/219 (7%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 V ++E + GI++L E+ + + + + V+ + Sbjct: 2 PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALR-IVEKHAPDIVLMDLTLPV 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 E G + E+ + T+ L + ++ + +LS DG L K ++ +I Q + Sbjct: 61 ME---GAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGA-DGYLLKNASRDILFQAM 116 Query: 128 FLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 L G R + ++ + + LS E+++L+ ++ G+ +AE+ Sbjct: 117 QTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEK 176 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215 L + KT+ HK N+ KLG +S A L+ A Sbjct: 177 LCISHKTVEKHKANLKRKLGTASTAELVTFAIEHGLTVP 215 >UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Actinomycetales RepID=C4DCK3_9ACTO Length = 214 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G+ L A ++ + V+ Sbjct: 2 IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEA-DGGQAAVRLAGELCPDLVLMDLRMPGM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +G++ + + P TR + + D + L +L+ ++ S E+ + + Sbjct: 61 ---DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELL-EAIR 116 Query: 129 LSLNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177 + +G + R L+ ERE+L + GY+ IAE+L Sbjct: 117 KAADGDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERL 176 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + T++ H ++M+K G S+ L A Sbjct: 177 HLGVTTVKTHIASLMTKTGCSNRVRLAVLAVR 208 >UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria RepID=GACA_PSEAE Length = 214 Score = 202 bits (516), Expect = 6e-51, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 14/214 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V +++ + GI + G E + V+ Sbjct: 2 IKVLVVDDHDLVRTGITRMLADIEGLQVV-GQADCGEDCLKLARELKPDVVLMDVKMPGI 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL +L P + +V+ + + + G ++K + LE Q + Sbjct: 61 G---GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAA-GYMTKGAGLEEMVQAIR 116 Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179 G R + ++ Q + +LS E +I ++ + + I+++L Sbjct: 117 QVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCL 176 Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 + KT+ +++ + KL ++SD L A + Sbjct: 177 SPKTVNTYRYRIFEKLSITSDVELALLAVRHGMV 210 >UniRef50_B4CVL8 Two component transcriptional regulator, LuxR family n=2 Tax=Chthoniobacter flavus Ellin428 RepID=B4CVL8_9BACT Length = 217 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 15/215 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++ V + + + G+ ++ G T +E+ + + ++ V+ + Sbjct: 1 METTKVLIADDHQVMRRGVRAVVELLEGWEVCGEASTGREA-VEMVEKLQPQIVVMDVTM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 GL ++ P T L+ + E + +L ++ Sbjct: 60 PE---LNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAA 116 Query: 126 ELFLSLN--------GVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIA 174 L+ + G L+ + + L+ EREI++ ++ G S ++A Sbjct: 117 LTALAAHKPYFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 + L ++KT+ H+ +M KL S + L+ A Sbjct: 177 DSLGISVKTVETHRAAIMKKLKFKSFSDLVRYAIR 211 >UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2 Tax=Clostridia RepID=B9MPQ9_ANATD Length = 211 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 16/211 (7%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 +KK V +++ G++ + T+ + + + + V+ Sbjct: 1 MKKPKVLIVDDNPAVLDGLKIILELE-NFEVV-SLCTNAKEAIEFLEKKHADVVLMDIRM 58 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +G+ + KFP + +++ E + SLS DG + K+S + Sbjct: 59 P---VMDGIEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGA-DGYILKSSDAKHIVN 114 Query: 126 ELFLSLNGVRQATDRLN----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175 + L+G + ++ + +++ L+ E EI + +S+GYS +IA Sbjct: 115 SILSVLDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIAR 174 Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 L + T+R + +++ KL + + + Sbjct: 175 MLFISEGTVRNYITSILQKLNLKNRTQIAVY 205 >UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT Length = 249 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 17/214 (7%) Query: 10 NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69 V L++ + G+ + + ++ ++ + S Sbjct: 19 KVLLVDDHPVVRDGLAQRIALEPDLSVCAACESVSRALRE-VTVHHPDLAVVDLSLPSGH 77 Query: 70 RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129 GL + E+ ++P R LV + D + +L G + K + + + Sbjct: 78 ---GLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGA-QGYVMKDESPDEVLAAIRK 133 Query: 130 SLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177 L+G + L+ + LS E E+L +M +G S+ IA++L Sbjct: 134 VLSGRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRL 193 Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 +R+ KTI ++ + KL + S++ L+ A + Sbjct: 194 ERSAKTIETYRQRLKEKLNIESNSELIAHAARWV 227 >UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14 Tax=Actinomycetales RepID=D1BX47_XYLCX Length = 234 Score = 202 bits (515), Expect = 7e-51, Method: Composition-based stats. Identities = 41/237 (17%), Positives = 74/237 (31%), Gaps = 33/237 (13%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS-RISFAAVIFSFSAM 66 VAL++ M G + E+ + + + V+ Sbjct: 9 PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 R +GL+ L R +V+ DI+ ++ ++ G + K + E Sbjct: 69 RM---DGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGA-SGFMLKDAPPEEMLGA 124 Query: 127 LFLSLNGVRQATDRLNNQ-------------------WYINQSRTLSPTEREILRFMSRG 167 + G + TL+ ERE+L M+RG Sbjct: 125 IRTVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARG 184 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP 224 S T+IA L T++ H +++KL + A + V+HP Sbjct: 185 RSNTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE---------TGVVHP 232 >UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2 Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY Length = 215 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 15/216 (6%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V + + + G+ ++ + T +E+ A R+ V Sbjct: 5 IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVA-QRLQPDVVCMDIRMPGG 63 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL + P +VI D++ + G+L G+L K S++ + + Sbjct: 64 ---DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGAC-GILLKDSSMTDLVEGVR 119 Query: 129 LSLNGVRQATDRLNNQWYI----------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178 + G L + + S L+P E + + + +G S +IA L Sbjct: 120 RAALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLF 179 Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214 T++ H + M+K G + L+ A + Sbjct: 180 LEPSTVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215 >UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI Length = 233 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 26/230 (11%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L++ + G + + +E+ ++A + ++ Sbjct: 2 ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENA-ANTPVDVILMDVQMP-- 58 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL + TR +V+ D E ++G++ G L K + E + Sbjct: 59 -VMDGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGA-SGFLLKDTAPEDLIAAVR 116 Query: 129 LS--------LNGVRQATDRLNNQWYINQS-------------RTLSPTEREILRFMSRG 167 + L+P E+EIL ++ G Sbjct: 117 TVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALG 176 Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 S T+IAE+L ++ T++ H V+SK G + A + + Sbjct: 177 KSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQ 226 >UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR family n=3 Tax=Bacteria RepID=B1ZWL0_OPITP Length = 234 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 16/219 (7%) Query: 4 SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63 S K V L++ ++ G+ L + S D + ++S + Sbjct: 15 STPTKSRVFLVDDHPITRQGVAVLINQERDLM-VCGEADSAPVAIDLIQKLSPDVALVDI 73 Query: 64 SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123 + + G+ + L P L+++ D +L ++ ++ +I Sbjct: 74 TL---KTTSGIELMKHLKALRPEMPVLIMSMHDESLFAERALRAGAKGYIMKHEASAKIL 130 Query: 124 HQELFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQ 172 + L+G +D++ + TLS E E+ + + GY Q Sbjct: 131 -TAIRRVLSGELYLSDKMKEKMLHRLVNNRKEEVVFSIDTLSDREMEVFQLIGNGYGTRQ 189 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211 IA +L ++KTI +++ ++ KL + S L+ A + Sbjct: 190 IASKLNLSVKTIDSYREHLKLKLRLESGTELVRHAIQWV 228 >UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DXM6_EIKCO Length = 215 Score = 202 bits (515), Expect = 8e-51, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 11/212 (5%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + L++ + G+ L + G E V+ Sbjct: 4 SNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEG-VKLARFHRPDLVLLDVEMP 62 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G L ++ P L++ + L L G + K + + + Sbjct: 63 ---VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGA-RGYILKNADTDFLVEA 118 Query: 127 LFLSLNGVRQATDRLNNQWYINQSR------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180 + ++ G + + +NN +L+ ER++LR+++ G S IA ++ + Sbjct: 119 IRQAVAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLS 178 Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 T++AH N+ KL + + A L Sbjct: 179 ENTVKAHMQNIFRKLNIDNRVRAAVYARELGL 210 >UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM Length = 223 Score = 202 bits (514), Expect = 9e-51, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 72/216 (33%), Gaps = 23/216 (10%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 + L + + GI+ + QE+ + + ++ + Sbjct: 3 IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTL-MLKPDILLLDINMPG- 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 GL +L R + + + D + ++ L L G L K + + + Sbjct: 61 --LTGLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGAL-GYLLKDVEPNVLIKAIH 117 Query: 129 LSLNGVRQATDRLNNQ------------------WYINQSRTLSPTEREILRFMSRGYSM 170 + G +L + W ++ L+P E ++L +++G S Sbjct: 118 MVNEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSN 177 Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 I + L + KT++ H +V KL V+ L Sbjct: 178 QDIGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVY 213 >UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales RepID=D2AUN6_STRRD Length = 226 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 19/219 (8%) Query: 9 RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68 V L + M G+ ++ +E+ D + V+ R Sbjct: 2 IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREA-IDLVLSHRPDVVLLDIRMPRM 60 Query: 69 ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128 +GL+ + EL P T +++ + + +L G L K+ + Sbjct: 61 ---DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGA-GGFLLKSGDPRELLAGIH 116 Query: 129 LSLNGVRQATDRLNNQ--------------WYINQSRTLSPTEREILRFMSRGYSMTQIA 174 G + R+ ++ Q L+P ER++L + G S QIA Sbjct: 117 AVAEGAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIA 176 Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213 +L T++AH ++++LG + A + Sbjct: 177 RRLYLVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLL 215 >UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B9T1_THEAS Length = 227 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 33/216 (15%), Positives = 80/216 (37%), Gaps = 14/216 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++K + L + + G+ L ++ + +S + ++F Sbjct: 1 MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDG-DATVEMVSALKPDVLLFDIHM 59 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 +++G+ + +L R + I D + + +LS +D + KAS + Sbjct: 60 P---KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHIT-ALSSVGIDAYVLKASGMAELLS 115 Query: 126 ELFLSLNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + G ++ + + L+P E E+L ++S+G + +IA + Sbjct: 116 AIRSVYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARK 175 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212 + + KT++ H +++ KL + A Sbjct: 176 MVLSEKTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211 >UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LQH4_DESBD Length = 222 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 19/225 (8%) Query: 7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66 + + +I+ + G+ + T E + ++ + S Sbjct: 3 APKRILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLR-LTQTLAPDLAVIDISLP 61 Query: 67 RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126 G+ E+ + P L+++ + + G +SK S E Q Sbjct: 62 ---DGSGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGA-SGYMSKESGGEGILQA 117 Query: 127 LFLSLNGVRQATDRLNNQWYINQSR--------------TLSPTEREILRFMSRGYSMTQ 172 + L+G + L+ S +LS E++++R ++ G + + Sbjct: 118 IETVLSGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEE 177 Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217 IA +L + KT+ H++ +M+KLG+ S + A L + + Sbjct: 178 IAAKLFVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLIEIDD 222 >UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16 Tax=Actinomycetales RepID=A8L3K7_FRASN Length = 244 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 30/210 (14%), Positives = 71/210 (33%), Gaps = 14/210 (6%) Query: 6 IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65 ++K V +++ + G+ + + E+ + + + + Sbjct: 33 MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPA-LHPHVAVLDGRL 91 Query: 66 MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125 G+ E+ P L++ D + L ++ G + K Sbjct: 92 P---DGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAA-GYVLKEIRGNDLVG 147 Query: 126 ELFLSLNGVRQATDRLNNQ---------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176 + +G + + TL+ EREIL+ ++ G + QI + Sbjct: 148 AIRTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTR 207 Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206 L + KT++ + +++ KLG++S Sbjct: 208 LGLSEKTVKNYVSSILEKLGLASRTQAAVY 237 >UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI Length = 223 Score = 201 bits (513), Expect = 1e-50, Method: Composition-based stats. Identities = 34/224 (15%), Positives = 77/224 (34%), Gaps = 27/224 (12%) Query: 8 KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67 + + + + GI L E+ D ++ I ++ + R Sbjct: 2 PIRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEA-IDLLASIGTDVLLLDITMPR 60 Query: 68 SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127 G+ L ++ K+P R L+ + ++ ++ G L K + LE + + Sbjct: 61 M---SGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAA-GYLLKDTGLEEMLRAV 116 Query: 128 FLSLNGVRQATDRLNNQWYIN---QSRTLSP-------------------TEREILRFMS 165 ++G ++ + + L+ E ++L + Sbjct: 117 RTVVDGDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLI 176 Query: 166 RGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209 G S +IAE+ + T+ + +++ K GV + A L+ A Sbjct: 177 DGMSSPEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLALE 220 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.313 0.190 0.615 Lambda K H 0.267 0.0585 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,588,252,141 Number of Sequences: 3077464 Number of extensions: 86731572 Number of successful extensions: 354986 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 15128 Number of HSP's successfully gapped in prelim test: 15564 Number of HSP's that attempted gapping in prelim test: 295778 Number of HSP's gapped (non-prelim): 34627 length of query: 225 length of database: 1,040,396,356 effective HSP length: 124 effective length of query: 101 effective length of database: 658,790,820 effective search space: 66537872820 effective search space used: 66537872820 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.9 bits) S2: 92 (39.5 bits)