52 c3snkA_ Probab=99.27   E-value=5.7e-12  Score=90.40  Aligned_columns=117  Identities=12%

Q ss_pred             CCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             56508998194899999999997389946999962998999999972253223333455789998774112322232333
Q batch____         7 KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPR   86 (225)
Q Consensus         7 ~~~~V~Ivdd~~l~~~gl~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~l~d~~~~~~~g~~~~~~i~~~~~~   86 (225)
                      |+++|+||||++.++..++..|...+.  +.+.+.++.+++........++++++   |..+|+.+|.+++..++..++.
T Consensus         1 k~~kILivddd~~~~~~l~~~L~~~~~--~~v~~~~~~~~~~~~~~~~~~dlvi~---d~~l~~~~g~~~~~~l~~~~~~   75 (119)
T c3snkA_           1 KRKQVALFSSDPNFKRDVATRLDALAI--YDVRVSETDDFLKGPPADTRPGIVIL---DLGGGDLLGKPGIVEARALWAT   75 (119)
T ss_dssp             CCEEEEEECSCHHHHHHHHHHHHHTSS--EEEEEECGGGGGGCCCTTCCCSEEEE---EEETTGGGGSTTHHHHHGGGTT
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHHHH--CCCCCCCCCCCHHHHHCCCCCEEEEE---HHHCCCCCCCCCCCCCCCCCCC
T ss_conf             974799980898999999999853100--01111233211588840589669987---1212546632111112222221


Q ss_pred             CEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             024213345408887678860778753046755788999999
Q batch____        87 TRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF  128 (225)
Q Consensus        87 ~~ii~lt~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  128 (225)
                      ++++++|+....+....++..|+.+|+.|+....+++..+..
T Consensus        76 ~pii~lt~~~~~~~~~~~~~~Ga~d~L~KP~~~~eL~~~v~~  117 (119)
T c3snkA_          76 VPLIAVSDELTSEQTRVLVRXNASDWLHKPLDGKELLNAVTF  117 (119)
T ss_dssp             CCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHCCCCCEEECCCCHHHHHHHHHH
T ss_conf             122221332100000011102856178759898999998741