BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (225 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=...   361   1e-98
UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Ente...   187   3e-46
UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C...   168   1e-40
UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Kl...   147   2e-34
UniRef50_B1EMV5 Transcriptional activator protein BglJ n=1 Tax=E...    72   1e-11
UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma...    62   1e-08
UniRef50_B8E485 Two component transcriptional regulator, LuxR fa...    62   1e-08
UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=...    62   1e-08
UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece...    59   2e-07
UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=...    58   3e-07
UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece...    57   6e-07
UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut...    57   7e-07
UniRef50_P69409 Capsular synthesis regulator component B n=164 T...    57   7e-07
UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ...    56   1e-06
UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud...    55   1e-06
UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellov...    55   2e-06
UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot...    55   2e-06
UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin...    55   3e-06
UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa...    54   3e-06
UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa...    54   3e-06
UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ...    54   5e-06
UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ...    53   7e-06
UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa...    53   9e-06
UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa...    52   1e-05
UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=...    52   2e-05
UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=S...    52   2e-05
UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr...    52   2e-05
UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa...    52   2e-05
UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa...    51   2e-05
UniRef50_C1M8K4 LuxR transcriptional regulator n=2 Tax=Citrobact...    51   3e-05
UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa...    51   3e-05
UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa...    51   4e-05
UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo...    51   4e-05
UniRef50_A4CN07 Response regulator containing a CheY-like receiv...    50   4e-05
UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, par...    50   5e-05
UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa...    50   5e-05
UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa...    50   5e-05
UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl...    50   6e-05
UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa...    50   7e-05
UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci...    50   7e-05
UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa...    50   8e-05
UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa...    50   8e-05
UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ...    49   9e-05
UniRef50_C6C961 Two component transcriptional regulator, LuxR fa...    49   1e-04
UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR fa...    49   1e-04
UniRef50_C4XNR8 NarL family two-component response regulator n=1...    49   1e-04
UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa...    49   1e-04
UniRef50_C3QQ50 Transcriptional regulator n=2 Tax=Bacteroides Re...    49   1e-04
UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa...    49   1e-04
UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa...    49   2e-04
UniRef50_C6P0R1 Two component transcriptional regulator, LuxR fa...    49   2e-04
UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla...    49   2e-04
UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib...    49   2e-04
UniRef50_Q04UI4 Receiver component of a two-component response r...    49   2e-04
UniRef50_A1VAY8 Two component transcriptional regulator, LuxR fa...    49   2e-04
UniRef50_B1T388 Two component transcriptional regulator, LuxR fa...    48   2e-04
UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ...    48   2e-04
UniRef50_UPI000197BDC0 two component LuxR family transcriptional...    48   2e-04
UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa...    48   2e-04
UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa...    48   3e-04
UniRef50_A0NVX8 Two component transcriptional regulator, LuxR fa...    48   3e-04
UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa...    48   3e-04
UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa...    48   3e-04
UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10...    48   3e-04
UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa...    48   3e-04
UniRef50_A3U840 DNA-binding response regulator, LuxR family prot...    47   3e-04
UniRef50_Q391P2 Two component transcriptional regulator, LuxR fa...    47   3e-04
UniRef50_UPI0001744DFC response regulator with a HTH DNA-binding...    47   4e-04
UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi...    47   4e-04
UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=...    47   4e-04
UniRef50_C1A5E6 NarL family two-component response regulator n=1...    47   4e-04
UniRef50_Q47I89 Two component transcriptional regulator, LuxR fa...    47   4e-04
UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa...    47   4e-04
UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 ...    47   4e-04
UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR fa...    47   4e-04
UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa...    47   4e-04
UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi...    47   4e-04
UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseu...    47   5e-04
UniRef50_C7MN84 Response regulator containing a CheY-like receiv...    47   5e-04
UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_C6WIE2 Transcriptional regulator, LuxR family n=1 Tax=A...    47   5e-04
UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammap...    47   5e-04
UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece...    47   5e-04
UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_Q2T904 Capsula synthesis response regulator transcripti...    47   5e-04
UniRef50_B7GTT1 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ...    47   5e-04
UniRef50_C8WK28 Transcriptional regulator, LuxR family n=1 Tax=E...    47   5e-04
UniRef50_C7LUF3 Two component transcriptional regulator, LuxR fa...    47   5e-04
UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa...    47   6e-04
UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa...    47   6e-04
UniRef50_C4LED9 Transcriptional regulator, LuxR family n=1 Tax=T...    47   7e-04
UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi...    46   7e-04
UniRef50_C5S952 Two component transcriptional regulator, LuxR fa...    46   7e-04
UniRef50_Q7UXT1 Response regulator n=1 Tax=Rhodopirellula baltic...    46   8e-04
UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa...    46   8e-04
UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI...    46   0.001
UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa...    46   0.001
UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersini...    46   0.001
UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14...    46   0.001
UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=...    46   0.001
UniRef50_UPI00016AA17B two component transcriptional regulator, ...    45   0.001
UniRef50_Q5P6A6 Two-component response regulator n=4 Tax=Rhodocy...    45   0.001
UniRef50_UPI00018267FE transcriptional regulator, LuxR family pr...    45   0.001
UniRef50_C3K5C3 Putative response regulator, receiver domain n=1...    45   0.001
UniRef50_Q0S8Z3 Response regulator, two-component system n=6 Tax...    45   0.001
UniRef50_A5FJ00 Two component transcriptional regulator, LuxR fa...    45   0.002
UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta...    45   0.002
UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece...    45   0.002
UniRef50_A5EKH3 Two component transcriptional regulator, LuxR fa...    45   0.002
UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ...    45   0.002
UniRef50_UPI0001C32085 transcriptional regulator, LuxR family n=...    45   0.002
UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n...    45   0.002
UniRef50_B9XRD7 Two component transcriptional regulator, LuxR fa...    45   0.002
UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa...    45   0.002
UniRef50_B2JQA9 Two component transcriptional regulator, LuxR fa...    45   0.002
UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrh...    45   0.002
UniRef50_B4ELF5 Two-component regulatory system, response regula...    45   0.002
UniRef50_D1ADV5 Transcriptional regulator, LuxR family n=1 Tax=T...    45   0.002
UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re...    45   0.002
UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobact...    45   0.002
UniRef50_Q7NVE2 Capsula synthesis response regulator transcripti...    45   0.002
UniRef50_C7C553 Putative uncharacterized protein n=1 Tax=Enterob...    45   0.002
UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece...    45   0.002
UniRef50_D1R7I4 Putative uncharacterized protein n=1 Tax=Parachl...    45   0.003
UniRef50_Q9XAT8 ThcG n=1 Tax=Rhodococcus erythropolis RepID=Q9XA...    45   0.003
UniRef50_C8QGG5 Two component transcriptional regulator, LuxR fa...    45   0.003
UniRef50_A8GBA0 Two component transcriptional regulator, LuxR fa...    44   0.003
UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa...    44   0.003
UniRef50_B4SIR4 Two component transcriptional regulator, LuxR fa...    44   0.003
UniRef50_Q7MV58 Transcriptional regulator, LuxR family n=2 Tax=P...    44   0.003
UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa...    44   0.003
UniRef50_A6V170 Probable two-component response regulator n=1 Ta...    44   0.003
UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Ente...    44   0.003
UniRef50_Q3BU15 Two-component system response regulator, LuxR fa...    44   0.003
UniRef50_C7ML75 Response regulator containing a CheY-like receiv...    44   0.003
UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus...    44   0.003
UniRef50_A0QW50 Two-component system response regulator n=1 Tax=...    44   0.003
UniRef50_Q31FU6 Two component transcriptional regulator, LuxR fa...    44   0.003
UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=S...    44   0.003
UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa...    44   0.004
UniRef50_C5NV86 Oxygen regulatory protein NreC n=1 Tax=Gemella h...    44   0.004
UniRef50_Q10550 Putative HTH-type transcriptional regulator Rv08...    44   0.004
UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Bu...    44   0.004
UniRef50_D2QUB6 Two component transcriptional regulator, LuxR fa...    44   0.004
UniRef50_D2SB03 Two component transcriptional regulator, LuxR fa...    44   0.004
UniRef50_Q2W0G1 Response regulator containing a CheY-like receiv...    44   0.004
UniRef50_B5I095 Two component transcriptional regulator n=1 Tax=...    44   0.004
UniRef50_B0MWF4 Putative uncharacterized protein n=1 Tax=Alistip...    44   0.004
UniRef50_C7M954 Transcriptional regulator, LuxR family n=2 Tax=C...    44   0.005
UniRef50_B5HBI1 Two-component system response regulator n=23 Tax...    44   0.005
UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR fa...    44   0.005
UniRef50_B1VE62 Two-component system response regulator n=3 Tax=...    44   0.005
UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa...    44   0.005
UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=R...    44   0.005
UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium...    44   0.005
UniRef50_B1ZJJ2 Transcriptional regulator, LuxR family n=7 Tax=M...    44   0.005
UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus s...    44   0.006
UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter...    44   0.006
UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Rose...    44   0.006
UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa...    44   0.006
UniRef50_A0JU95 Transcriptional regulator, LuxR family n=1 Tax=A...    44   0.006
UniRef50_B4D016 Two component transcriptional regulator, LuxR fa...    44   0.006
UniRef50_Q1LMP7 Two component transcriptional regulator, LuxR fa...    44   0.006
UniRef50_A6ARQ2 Transcriptional regulator, LuxR family protein n...    44   0.006
UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis Re...    43   0.006
UniRef50_B7UVM8 Probable transcriptional regulator n=6 Tax=Pseud...    43   0.007
UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin...    43   0.007
UniRef50_B8FQ55 Transcriptional regulator, LuxR family n=2 Tax=D...    43   0.007
UniRef50_C5AJ00 DNA-binding HTH domain-containing protein n=13 T...    43   0.007
UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodoba...    43   0.007
UniRef50_B9Z3N9 Two component transcriptional regulator, LuxR fa...    43   0.007
UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS    43   0.007
UniRef50_C1M8K7 Predicted protein n=2 Tax=Citrobacter RepID=C1M8...    43   0.007
UniRef50_C5C4U8 Two component transcriptional regulator, LuxR fa...    43   0.007
UniRef50_Q21Y82 Two component transcriptional regulator, LuxR fa...    43   0.007
UniRef50_A4AJ82 Putative LuxR-family transcriptional regulator n...    43   0.008
UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa...    43   0.008
UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon...    43   0.008
UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei...    43   0.008
UniRef50_A8Y5U6 Putative response regulator n=1 Tax=Prosthecobac...    43   0.008
UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele...    43   0.008
UniRef50_B1ZI39 Two component transcriptional regulator, LuxR fa...    43   0.008
UniRef50_Q89XB5 Transcriptional regulatory protein n=1 Tax=Brady...    43   0.008
UniRef50_D0LDI8 Regulatory protein LuxR n=1 Tax=Gordonia bronchi...    43   0.009
UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa...    43   0.009
UniRef50_A9HE32 Putative transcriptional regulatory protein n=1 ...    43   0.009
UniRef50_C0YJJ8 LuxR family transcriptional regulator n=1 Tax=Ch...    43   0.009
UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa...    43   0.009
UniRef50_B3E9L1 Two component transcriptional regulator, LuxR fa...    43   0.009
UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa...    43   0.009
UniRef50_B9Z8S5 Two component transcriptional regulator, LuxR fa...    43   0.009
UniRef50_B4WXQ1 Transcriptional regulator, LuxR family protein n...    43   0.009
UniRef50_D2Q2Q4 Transcriptional regulator, LuxR family n=2 Tax=K...    43   0.009
UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus ...    43   0.010
UniRef50_A1K8Y3 Two-component response regulator n=6 Tax=Proteob...    43   0.010
UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa...    43   0.010
UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa...    43   0.010
UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=G...    43   0.010
UniRef50_A6CG81 DNA-binding response regulator, LuxR family prot...    43   0.010
UniRef50_B4D4R4 Two component transcriptional regulator, LuxR fa...    43   0.010
UniRef50_A9BU27 Transcriptional regulator, LuxR family n=1 Tax=D...    42   0.010
UniRef50_C5BZU7 Two component transcriptional regulator, LuxR fa...    42   0.011
UniRef50_A4VZN8 Response regulator containing a CheY-like receiv...    42   0.011
UniRef50_UPI0001C31904 transcriptional regulator, LuxR family n=...    42   0.011
UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2 ...    42   0.011
UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa...    42   0.011
UniRef50_A7JTF8 Tetrathionate reductase regulon response regulat...    42   0.011
UniRef50_UPI0001C33E7F two component LuxR family transcriptional...    42   0.012
UniRef50_C7PX21 Two component transcriptional regulator, LuxR fa...    42   0.012
UniRef50_A3VTU0 Two-component response regulator n=1 Tax=Parvula...    42   0.012
UniRef50_Q1IY93 Transcriptional regulator, LuxR family n=1 Tax=D...    42   0.012
UniRef50_C0Z8M0 Two-component response regulator n=1 Tax=Breviba...    42   0.012
UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta...    42   0.012
UniRef50_UPI0000382D84 COG2909: ATP-dependent transcriptional re...    42   0.012
UniRef50_C6VU12 Transcriptional regulator, LuxR family n=1 Tax=D...    42   0.012
UniRef50_C2KQV5 Response regulator n=2 Tax=Mobiluncus mulieris R...    42   0.012
UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular...    42   0.013
UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=...    42   0.013
UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepI...    42   0.013
UniRef50_C1TQ52 Response regulator containing a CheY-like receiv...    42   0.013
UniRef50_D2U148 Two-component system, NarL family, invasion resp...    42   0.013
UniRef50_C0N928 Putative uncharacterized protein n=1 Tax=Methylo...    42   0.013
UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv...    42   0.013
UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleu...    42   0.014
UniRef50_C0BE05 Putative uncharacterized protein n=1 Tax=Coproco...    42   0.014
UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa...    42   0.014
UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa...    42   0.014
UniRef50_C5CJZ9 Two component transcriptional regulator, LuxR fa...    42   0.015
UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa...    42   0.015
UniRef50_Q1LDC8 Two component transcriptional regulator, LuxR fa...    42   0.015
UniRef50_A1SPZ4 Regulatory protein, LuxR n=1 Tax=Nocardioides sp...    42   0.015
UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Er...    42   0.015
UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25...    42   0.015
UniRef50_Q2SEA9 ATP-dependent transcriptional regulator n=1 Tax=...    42   0.015
UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR fa...    42   0.016
UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa...    42   0.016
UniRef50_C7BU28 Two component transcriptional regulator, luxr fa...    42   0.016
UniRef50_A1K960 Probable transcriptional regulator, LuxR family ...    42   0.016
UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa...    42   0.016
UniRef50_B8EBA2 Two component transcriptional regulator, LuxR fa...    42   0.016
UniRef50_C4UB72 Two-component response regulator n=1 Tax=Yersini...    42   0.016
UniRef50_UPI0001BC30E6 two-component system, NarL family, respon...    42   0.017
UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa...    42   0.017
UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa...    42   0.017
UniRef50_A0M543 Two-component system response regulator n=3 Tax=...    42   0.018
UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1 ...    42   0.018
UniRef50_D1ACQ9 Transcriptional regulator, LuxR family n=1 Tax=T...    42   0.019

>UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=cellular organisms
           RepID=BGLJ_ECOLI
          Length = 175

 Score =  361 bits (926), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 51  MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110
           MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL
Sbjct: 1   MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 60

Query: 111 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170
           DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM
Sbjct: 61  DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 120

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 225
           TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY
Sbjct: 121 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 175


>UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Enterobacter
           RepID=A4W681_ENT38
          Length = 211

 Score =  187 bits (475), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 95/192 (49%), Positives = 131/192 (68%)

Query: 19  MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78
           MS+IG+E  F   +  PY+LH + + +SF  A++ I F +VI+S S  R ERR  L+ + 
Sbjct: 1   MSAIGLEHFFTTVSFRPYQLHLFKNFDSFNTALTYIPFFSVIYSLSDAREERRNCLAYMR 60

Query: 79  ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138
           ELA K    +R+++A D++EARLIG LSPS L G++SK+S+L    ++L   L+   Q  
Sbjct: 61  ELAFKHGAIQRIILASDEVEARLIGQLSPSRLHGIISKSSSLVDLRRQLITLLSETGQVN 120

Query: 139 DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
                 W+   +R LSPTER +LR+MS G S+ +IAEQL+RNIKTIRAHK+N M KLGV+
Sbjct: 121 SNAFTHWHGCHTRMLSPTERTVLRYMSSGLSIPEIAEQLERNIKTIRAHKYNAMLKLGVN 180

Query: 199 SDAGLLEAADIL 210
           SD GLL+AADIL
Sbjct: 181 SDVGLLDAADIL 192


>UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter
           RepID=C9XUX9_CROTZ
          Length = 200

 Score =  168 bits (425), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%)

Query: 19  MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78
           MS  G+ SL +       +L  ++   +F  A++   F+ VIFS    R  RR+ L  ++
Sbjct: 1   MSGEGVRSLLQVNNSTSCRLEIFSDHHAFIQALTYRHFSTVIFSLEGTREHRRDCLQFVS 60

Query: 79  ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138
           E+A  +PR +R+V+ ++  EA+LI  LSP+PL G++ K+ TL  F  EL  +++   + +
Sbjct: 61  EMAKAWPRMKRIVMVNNVNEAKLISQLSPTPLQGIIDKSETLSRFTDELMSAMSDSARVS 120

Query: 139 DRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           +  +  WY +Q SR LSPTER ILR+++ GYS++QIA +L+RNIKTIRAHKFN M KLGV
Sbjct: 121 ESPHKIWYASQGSRLLSPTERIILRYLTDGYSVSQIACRLERNIKTIRAHKFNAMLKLGV 180

Query: 198 SSDAGLLEAADILL 211
            +DAGLL AADILL
Sbjct: 181 HTDAGLLNAADILL 194


>UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Klebsiella
           RepID=C4X2X4_KLEPN
          Length = 224

 Score =  147 bits (372), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/211 (42%), Positives = 123/211 (58%), Gaps = 17/211 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           R+VA++EKCVM+ +    +F +     Y +H + +    + A     ++ +IFS S  RS
Sbjct: 8   RHVAIVEKCVMTEMAWRYIFSREDNRRYHIHLFKNVSMLRAAEIPFPWSTIIFSLSGSRS 67

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            R E L  + E+A   P  + +++A+++ E  LIG L P+ L G+L+K++      QE  
Sbjct: 68  SRAESLLFVHEMARCRPEVQTIILANNESEMHLIGHLMPACLHGILNKSAPRRGL-QECL 126

Query: 129 LSL------NGVRQATDR--LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
           L L      +G  Q  DR   N+         LSPTE  ILR+MS GYS++ IA QL RN
Sbjct: 127 LQLLDNHHLSGSEQFCDREACND--------PLSPTEHAILRYMSWGYSLSDIAIQLNRN 178

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           IKTIRAHKFN M+KLGV SD GLL AADILL
Sbjct: 179 IKTIRAHKFNAMTKLGVRSDIGLLNAADILL 209


>UniRef50_B1EMV5 Transcriptional activator protein BglJ n=1 Tax=Escherichia albertii
           TW07627 RepID=B1EMV5_9ESCH
          Length = 44

 Score = 72.0 bits (175), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/36 (94%), Positives = 35/36 (97%)

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARL 101
           MR+ERREGLSCL ELAIKFPRTRRLVIADDDIEARL
Sbjct: 1   MRTERREGLSCLNELAIKFPRTRRLVIADDDIEARL 36


>UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group
           RepID=C4KWB3_BURPS
          Length = 210

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 24/159 (15%)

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA--DDDI---EARLIGSLSPSPLDGV 113
           VI  F+       +GL+ LT +   +P  R +V+   D+ +     R  G+L+      V
Sbjct: 52  VITDFAMPEQPAADGLAMLTAIRDGYPSVRVIVLTMLDNPVLMHTMRQAGALA------V 105

Query: 114 LSKASTLEIFHQELFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFM 164
           LSK   L+    EL  +L  V Q    +               +  R LSP E E++R  
Sbjct: 106 LSKRGDLD----ELPRALAAVYQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLC 161

Query: 165 SRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           + G +MT IA +  R+IKT+  HK N M KLG+ SD  L
Sbjct: 162 ATGMTMTDIANRYGRSIKTVSTHKHNAMGKLGLKSDVDL 200


>UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4
           Tax=Gammaproteobacteria RepID=B8E485_SHEB2
          Length = 212

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 7/155 (4%)

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
           +I  FS    +  +G++ + +L  K+P    +V+        ++ +L    ++G+L K S
Sbjct: 53  LITDFSMPNDDNVDGMAMIKQLRRKYPNLPIIVLTQVH-NLGVLQALMQIGINGLLLKKS 111

Query: 119 TLEIFHQELFLSLNG---VRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQ 172
            +      +   L+G   +  A   L N+  INQ  T   LS  E E++R ++ G S+TQ
Sbjct: 112 VIAELANTVKKVLSGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQ 171

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +A  L R++KTI   K N M KLG+ SD+ L   A
Sbjct: 172 VASYLNRSVKTISTQKTNAMQKLGLKSDSELFHYA 206


>UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes
           RepID=C3BGJ6_9BACI
          Length = 201

 Score = 62.0 bits (149), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 83/152 (54%), Gaps = 20/152 (13%)

Query: 70  RREGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLE------ 121
           R +G+  LTE+ +++ + + +V+   +D+    LI +   S   G + KA+  E      
Sbjct: 47  RLDGIQVLTEIKLRYEQAKVIVLTMHEDEDYVTLIMNAGAS---GYVPKAAVDEELYTAI 103

Query: 122 --IFHQELFLSLNGVRQATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSMTQIAE 175
             +    L+L    +     RL N+    +SR     LSP ERE+L+F+ +G+S+++IA+
Sbjct: 104 DSVMDGYLYLRPKEISTMLKRLQNE---TESRNPYVILSPREREVLQFLVKGFSLSEIAQ 160

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L  +IKT+  HK  +++KL +S  + L++ A
Sbjct: 161 ELTISIKTVDTHKTRMLNKLNLSKKSELVQYA 192


>UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 15/160 (9%)

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
           ++  FS       +GL+ LT L  +FP  R +V+   +  A L+ S+    + G+++K  
Sbjct: 52  LVTDFSMPCGATPDGLAMLTSLRQRFPHVRVVVLTMLE-NAGLMVSMQDVGVLGIVNKRD 110

Query: 119 TLE--------IFHQELFLSLN---GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167
            L          F +   LS +    +RQ   +++ +   + +R LSP E E++R    G
Sbjct: 111 DLSELPAVIAAAFRRRRLLSTSVHEDLRQWEHQMSQR---HAARQLSPRETEVVRMYVNG 167

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            S +++A  L R+I TI   K N M KLGVS+DA L + A
Sbjct: 168 MSTSEMARHLHRSINTISTQKTNAMRKLGVSNDAELFDYA 207


>UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK
          Length = 220

 Score = 57.8 bits (138), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 37/55 (67%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           TLS  E EI+R    GY +T+IAE+L R+ KTI A K   M KLGV+SDA L+ A
Sbjct: 150 TLSKRETEIVRLFREGYKVTEIAEKLHRSKKTISAQKLAAMRKLGVTSDAELIRA 204


>UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM
          Length = 199

 Score = 56.6 bits (135), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 15/149 (10%)

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------IF 123
           +GL+ L  L   FP+ R +V+   D +  L+  L    + G++SK   L+         +
Sbjct: 53  DGLALLDYLGAHFPQLRIVVMTGLD-QPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMAAY 111

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               FLS + V +  DR   +    ++  LSP E+E++     G S+ +IA +L R  +T
Sbjct: 112 ANRRFLSPS-VAEILDRREQR----RATALSPREQEVVELFIAGLSVAEIARKLDRKKQT 166

Query: 184 IRAHKFNVMSKLGVSSDAGLLE-AADILL 211
           +   K N M KLG+  DA LL  AAD+ L
Sbjct: 167 VSTQKNNAMRKLGIERDAELLTFAADLGL 195


>UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ
          Length = 218

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 26/155 (16%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           GL   ++++  FP T+ L++   D E  L   L  S   G + K S      ++L L++ 
Sbjct: 62  GLIATSKISESFPDTKILILTMFDDEEYLFHVLK-SGAKGYILKNSP----DEQLILAVR 116

Query: 133 GVRQA--------TDRLNNQWYINQSRT------------LSPTEREILRFMSRGYSMTQ 172
            V Q         T  L N+ ++NQS+T            LS  E EIL  +++GY    
Sbjct: 117 TVYQGETYVDMKLTTSLVNE-FVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKD 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           IAE+L  ++KT+ AHK ++M+KL + S   L+E A
Sbjct: 176 IAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210


>UniRef50_P69409 Capsular synthesis regulator component B n=164
           Tax=Enterobacteriaceae RepID=RCSB_ECO57
          Length = 216

 Score = 56.6 bits (135), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 8/113 (7%)

Query: 92  IADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR 151
           + D DIE  ++   +P+ L   L+     + F  E       V +  ++++   Y    +
Sbjct: 98  VLDLDIEGIVLKQGAPTDLPKALAALQKGKKFTPE------SVSRLLEKISAGGY--GDK 149

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
            LSP E E+LR  + G+ +T+IA++L R+IKTI + K + M KLGV +D  LL
Sbjct: 150 RLSPKESEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALL 202


>UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria
           RepID=Q4KAJ3_PSEF5
          Length = 217

 Score = 55.8 bits (133), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 71/147 (48%), Gaps = 21/147 (14%)

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +G+  +T L   FPR + LV+        ++ +L    +  VL K   +     EL  +L
Sbjct: 68  DGIRLVTYLIRHFPRVQVLVLTMMS-NPMIVAALYDIGVRSVLPKRHDMS----ELLSAL 122

Query: 132 NGVRQATDRLNNQWYINQSR--------------TLSPTEREILRFMSRGYSMTQIAEQL 177
             VRQ   R+++   + Q+               +L+P E E+LR   RG SM QIA  L
Sbjct: 123 ENVRQG--RIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAANL 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           KR++KT+ A K + + KL + SD  L+
Sbjct: 181 KRSVKTVSAQKISAIRKLNLDSDQALV 207


>UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7V7K0_PSEA8
          Length = 212

 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/57 (43%), Positives = 42/57 (73%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           +  + LSPTE +ILR ++RG ++++IA++  R++ TI  HK N M K+G++SDA L+
Sbjct: 144 HTGKPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDAELI 200


>UniRef50_Q6ML78 Two-component response regulator n=1 Tax=Bdellovibrio bacteriovorus
           RepID=Q6ML78_BDEBA
          Length = 204

 Score = 55.1 bits (131), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 16/125 (12%)

Query: 83  KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--------FLSLNGV 134
           KF  + R+++    +E+ ++ +   SP+  ++SK S LE   + L        FLS N +
Sbjct: 74  KFNASIRVMVFTQSLESAILKTYWNSPVVAIVSKGSLLEDVPKALLALKRGERFLSAN-I 132

Query: 135 RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194
           R+A D+   +        L+  E E+ R ++ G S  +IAE L  + +TI+ HK N+M+K
Sbjct: 133 REAIDKAGVE-------VLTKREIEVARMIATGRSNKEIAEVLGCSDQTIKTHKTNIMTK 185

Query: 195 LGVSS 199
           LGV++
Sbjct: 186 LGVNT 190


>UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFI8_DESAH
          Length = 220

 Score = 54.7 bits (130), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 38/51 (74%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           +SP ERE+L+ ++ G    QIAE+L  +IKT+ AH+ N+M+KL +SS AGL
Sbjct: 152 ISPREREVLQLIAEGVKTRQIAERLFVSIKTVEAHRRNIMNKLMISSVAGL 202


>UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia
           RepID=D0FMI8_ERWPY
          Length = 214

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 79/153 (51%), Gaps = 8/153 (5%)

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
           FS S+ RS   +G + +  L+ +FP  + +V+        ++       +  ++SK+  +
Sbjct: 58  FSLSSKRSAI-DGFAKIRALSGRFPLVK-IVLLTSQKNIAILRKTCDYGVKAIVSKSDPV 115

Query: 121 E--IFHQELFLSLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIA 174
           E  +      ++ +G   ++   N + Y+++S      L+P E E++R  S GY++++IA
Sbjct: 116 EDTVIACHHVMNQSGYYFSSSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +  R I T+   K+N M +LGVSS+  L+  A
Sbjct: 176 RRQNRTISTVSTQKYNAMRRLGVSSNVELIRYA 208


>UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8
          Length = 217

 Score = 54.3 bits (129), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 37/53 (69%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           R LSP + E++R   RG S+++IA  L R+++T+   K + M+KLGVS+D GL
Sbjct: 148 RHLSPRQSEVIRMFVRGKSISEIARDLGRDVRTVSRQKRDAMAKLGVSNDPGL 200


>UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3
           Tax=Proteobacteria RepID=Q313W8_DESDG
          Length = 223

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 24/164 (14%)

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122
           R +G+     +  + P  R LV+        +  +L+      VL  AS  E       +
Sbjct: 62  RMDGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESV 121

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQI 173
              +++LS  GV  A  +     Y+N +R         TL+P E+EI + ++ GY   +I
Sbjct: 122 LGGKIYLS-PGVSDAVVK----GYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREI 176

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA---DILLCMR 214
           AE L  ++KT+  H+ N+M KLGV S A L   A    I+L MR
Sbjct: 177 AEMLVVSVKTVEKHRSNLMQKLGVHSAAELRALALERGIILRMR 220


>UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas
           syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14
          Length = 212

 Score = 53.5 bits (127), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-ASTLEIF 123
           AM + RR+GL  L  L    P  + +V+      + ++G L+   + GV+ K A   E+ 
Sbjct: 57  AMPNSRRDGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNLG-IQGVVEKNADQFELI 115

Query: 124 --------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
                   HQ         R+A   ++   +   S  LSP E E++R ++ G +  Q+AE
Sbjct: 116 EAIKKVARHQRYISPF--FREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAE 173

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L R+IKTI   K +  +KLG+ +DA L + A
Sbjct: 174 KLSRSIKTISWTKVSAKTKLGIKTDAELYQYA 205


>UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM
          Length = 223

 Score = 53.1 bits (126), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 15/93 (16%)

Query: 130 SLNGVRQATDR-LNNQWYINQS--------------RTLSPTEREILRFMSRGYSMTQIA 174
            ++G+R+A D  L+   Y++                  LSP E E+LR    G S+T+IA
Sbjct: 111 GVDGIRRAVDTVLSGGIYLDPELAHCLQDAGRERSLSVLSPKELEVLRLYVSGPSITEIA 170

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            QL+R + TI   + + M KLG+S+DA L   A
Sbjct: 171 AQLRRTVSTISRQRISAMRKLGISNDAELFAYA 203


>UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3
           Tax=Chloroflexus RepID=B8GAC9_CHLAD
          Length = 213

 Score = 52.8 bits (125), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 8/143 (5%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125
           GL+ +  L    P+ R LV+   D E  +  +L+      VL +A+  E       +   
Sbjct: 62  GLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVLRG 121

Query: 126 ELFLSLNGVRQA-TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           EL++     R+   D L      N   +LS  ERE+L  ++RGY+  +IA QL  + KT+
Sbjct: 122 ELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPKTV 181

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             ++   M KLG+ S A L++ A
Sbjct: 182 ETYRTRGMEKLGLRSRAALVQFA 204


>UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1
           Tax=Pectobacterium carotovorum subsp. carotovorum PC1
           RepID=C6DD36_PECCP
          Length = 218

 Score = 52.0 bits (123), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 6/140 (4%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-FLSL 131
           GLS LT L  + P+ R ++++  D  A +  +L      G L+K    E   Q +  +S 
Sbjct: 71  GLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGA-GGYLTKRCGPEELVQAVRVVSS 129

Query: 132 NGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
            G+    D L+     Q    +   L+P EREI   +  G S+  IAEQL+ + KT+  H
Sbjct: 130 GGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVHVH 189

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
           + N++SKL   S   L+  A
Sbjct: 190 RANILSKLQCESTVELVHFA 209


>UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas
           testosteroni CNB-2 RepID=D0IY57_COMTE
          Length = 201

 Score = 52.0 bits (123), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           L +Q    + ++L+P E E+LR+  RG S+ +IAE+L R+IKT+ + K   M KL   S+
Sbjct: 127 LQHQMLQERFKSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMRKLEAKSN 186

Query: 201 AGLLEAADILLCMRHCETSNVLH 223
             L         M  C  S V H
Sbjct: 187 QEL---------MAFCLNSGVFH 200


>UniRef50_A8GFU0 Transcriptional regulator, LuxR family n=1 Tax=Serratia
           proteamaculans 568 RepID=A8GFU0_SERP5
          Length = 199

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 41/59 (69%), Gaps = 1/59 (1%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           L+PTER I++ +  G  +T IA +L+R+I+TI +HK   M KLG++S+A +L A   LL
Sbjct: 42  LTPTERHIVQALLSGQDLTAIAWKLQRDIRTISSHKQRAMGKLGLTSNA-MLHALGALL 99



 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P E+++L  +  G+S++ IA Q  R++KT+   K ++M KLG+ S+  L   A
Sbjct: 114 LAPREQQVLNALLNGHSVSDIAHQQARSVKTVSFQKRHLMQKLGLHSEVELFALA 168


>UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria
           RepID=Q2LSF1_SYNAS
          Length = 217

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 37/58 (63%)

Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           S  L+P ERE+L+ ++ G S  QIA  L  ++KT+  H+ N+  KLGV S A L++ A
Sbjct: 150 SSELTPRERELLQLLAEGLSAKQIAANLHVSVKTVETHRRNITQKLGVGSVAELIKYA 207


>UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC
          Length = 246

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 5/67 (7%)

Query: 142 NNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            + W   Q+RT  LSP E +++R +SRG ++ +IA +L R+ KTI   K N M K GV +
Sbjct: 175 GSDW---QARTNLLSPRELDVVRLLSRGMAVGEIAVKLSRSRKTISTQKANAMKKFGVKT 231

Query: 200 DAGLLEA 206
           +  L++A
Sbjct: 232 NVDLVDA 238


>UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteria RepID=B1ZVM0_OPITP
          Length = 219

 Score = 51.2 bits (121), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 20/150 (13%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G      +A + PRT+ L+++    E  ++ +L       +L  A+T      EL L+LN
Sbjct: 65  GFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAAT-----AELQLALN 119

Query: 133 GVRQATDRLN---------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            VR+    L+                      ++ L+P  REI++ ++ G S  +IA  L
Sbjct: 120 AVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLL 179

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++KTI  H+ ++M++LG+   AG++  A
Sbjct: 180 NLSVKTIETHRMHLMARLGLHDVAGVVRYA 209


>UniRef50_C1M8K4 LuxR transcriptional regulator n=2 Tax=Citrobacter
           RepID=C1M8K4_9ENTR
          Length = 178

 Score = 51.2 bits (121), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 9/121 (7%)

Query: 83  KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN 142
           KF     +++AD  + A+L   L       VL++ S+L  F Q   LS+        + N
Sbjct: 52  KFYNNVVVIVADSSV-AKLCVELLYVEKTIVLTEKSSLRDFGQLAKLSVG-------KWN 103

Query: 143 NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202
            + Y +Q R L+  E++IL  +  GY+  +I+E +  N KTI+AHK  V++KLG+++ + 
Sbjct: 104 PRLYRSQKR-LTEREQQILNLLVSGYTAKEISELVSLNYKTIQAHKMRVVAKLGLTNTSD 162

Query: 203 L 203
           L
Sbjct: 163 L 163


>UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2
           Tax=Acidobacteria RepID=Q01NJ8_SOLUE
          Length = 224

 Score = 50.8 bits (120), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 44/68 (64%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           TL+  EREIL+ ++ G S+ +IA   + ++KT+ AHKFN+M KL + + A L++ A    
Sbjct: 155 TLTKREREILKMLAEGKSVKEIAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKK 214

Query: 212 CMRHCETS 219
            +R  ET+
Sbjct: 215 IIRLPETT 222


>UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4
           Tax=Burkholderia RepID=B1Z6J3_BURA4
          Length = 225

 Score = 50.8 bits (120), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 7/174 (4%)

Query: 43  SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLI 102
           S ++  D++SRI    V+  ++   + +REG++ L  L   +P+   +V+   +    +I
Sbjct: 39  SSDTLIDSISRIHCDVVLIDYAIRGNGKREGMALLGYLRRTYPQVGMVVLVTHE-NPVII 97

Query: 103 GSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT------LSPT 156
            ++    ++ ++SK   +      +     G    + ++      +          LSP 
Sbjct: 98  QAILDLGVESLVSKLDDVGHIVTAIHACYGGGSYLSPQIKRSLASSGGDGRRPPLRLSPR 157

Query: 157 EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           E E++R    G ++ QIA +L R   TI + K + M KLGV  D  L+  A  L
Sbjct: 158 EIEVIRLYLSGMTINQIAGRLNRGKPTISSQKISAMKKLGVKGDVELVRYATCL 211


>UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WQV4_9DELT
          Length = 222

 Score = 50.8 bits (120), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 39/66 (59%)

Query: 134 VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193
           +RQ   RL+          LSP E+EI R ++ GYS+ QI + L  + KT+  HK++V++
Sbjct: 141 MRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIGDALNISPKTVETHKYSVLT 200

Query: 194 KLGVSS 199
           KL  SS
Sbjct: 201 KLRASS 206


>UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CN07_9FLAO
          Length = 217

 Score = 50.4 bits (119), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 20/221 (9%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +AL++   +   GI S+  +  G   ++H    Q      + + + A V+ +   +R   
Sbjct: 4   IALVDDHRLFLEGIRSILDREIG--LEVHASVGQGVELLNLLKTTRADVVLT--DIRMPG 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GLS   ++   FP TR + +   D E   +  L  +   G L K     +  +EL  +
Sbjct: 60  MDGLSLTRQICRSFPNTRVIALTMLDHEQD-VKDLLDAGARGYLVK----NVEKEELVQA 114

Query: 131 LNGVRQATDRLNNQ-------WYINQSRT----LSPTEREILRFMSRGYSMTQIAEQLKR 179
           ++ V +    L+ +       W   + R     L+  ER++L  +++G +  QIAE LK 
Sbjct: 115 IHTVARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKL 174

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
           +  TI  H+ N+  K+G+ S+ GLL+AA   L     +T N
Sbjct: 175 SRFTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215


>UniRef50_Q9EUH1 Virulence plasmid genes, 14.7 kb pef region, partial and n=17
           Tax=Salmonella enterica subsp. enterica
           RepID=Q9EUH1_SALEN
          Length = 119

 Score = 50.4 bits (119), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 7/75 (9%)

Query: 145 WY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           WY       N    LSP E  ++R + RGY+  QIA    R++KTI A K     +LGV 
Sbjct: 18  WYDRLCIEFNSDGGLSPAELRVIRLLLRGYNSGQIAALCFRSVKTISAQKGQAFRRLGVR 77

Query: 199 SDAGLLEAADILLCM 213
           +DA LL    ILL M
Sbjct: 78  NDATLLPTL-ILLGM 91


>UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3
           Tax=Betaproteobacteria RepID=Q2YB36_NITMU
          Length = 217

 Score = 50.1 bits (118), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L+P+E E+L  +  G+S  +IA+ L R+IKTI  H+FN+ +KL +   A L+  A
Sbjct: 155 SLTPSEFEVLHLIGSGHSSQEIAKLLSRSIKTIETHRFNIRTKLNLKDGADLIRYA 210


>UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM
          Length = 210

 Score = 50.1 bits (118), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 102 IGSLSPSPLDGVLSKASTLEIFHQELF-LSLNGVRQATDRLNNQWYINQSRTLSPTEREI 160
           IG L  + + GV+SKA  L +  + +  +SL   R   D  N       S  LS  ERE+
Sbjct: 102 IGPLIDAGVRGVVSKAEPLPLLSEAIVRVSLGLDRLPPDCRNPA----DSEDLSRNEREV 157

Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           L  +  G ++++IA+Q  R+IKT+   K   + KLG+ +DA
Sbjct: 158 LHLLLAGLTVSEIAQQRHRSIKTVSTQKKAALRKLGLRNDA 198


>UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531
           RepID=C4V1Z2_9FIRM
          Length = 209

 Score = 50.1 bits (118), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 12/137 (8%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------LEIFHQ 125
           GL+C+ E+   +P  + LV++  + E  +  ++    + G L K S        L++  Q
Sbjct: 58  GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAM-GYLPKTSADNELFDALQVLSQ 116

Query: 126 -ELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
              +LS N  +   D   R   +   +    L+  ERE+   +  GY++T+IAEQL  ++
Sbjct: 117 GRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSV 176

Query: 182 KTIRAHKFNVMSKLGVS 198
           KT+  HK ++  KL  S
Sbjct: 177 KTVDTHKKHIYEKLHCS 193


>UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1
           Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS
          Length = 218

 Score = 49.7 bits (117), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 137 ATDRLNNQWY--INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194
           A+  L  +W   +  S  LS  E E+L     G ++++IA++L R+IKT+  HK  VM+K
Sbjct: 136 ASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTVSTHKVAVMNK 195

Query: 195 LGVSSDAGLL 204
           LG+  D  L+
Sbjct: 196 LGIRKDIDLI 205


>UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VTE0_9BACI
          Length = 219

 Score = 49.7 bits (117), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 14/149 (9%)

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +G+    E+  K P  R L++     EA L  SL       VL +A   E+ H  + L +
Sbjct: 62  DGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVHA-VKLVM 120

Query: 132 NGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           NG       L  + Y              NQ+  LS  E+E+L++++ GY+  +I+ +L 
Sbjct: 121 NGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEISTELF 180

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +IKT+  +K  VM K+G    + L+  A
Sbjct: 181 ISIKTVDTYKKRVMEKIGSKKKSALVRYA 209


>UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI
          Length = 214

 Score = 49.7 bits (117), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 8/78 (10%)

Query: 139 DRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190
           D+L N+  I+   T        L+P E EI+R +  G S +QIAE+L  + +TI+ H+ N
Sbjct: 133 DQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLFLSAETIKTHRKN 192

Query: 191 VMSKLGVSSDAGLLEAAD 208
           +  KLG++S A L+  A+
Sbjct: 193 IYFKLGINSVAALILFAN 210


>UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1
           Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT
          Length = 218

 Score = 49.7 bits (117), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           TL+P+E E+L  + +G+S  +IA+ L R+IKTI  H+FN+  KL +   A L+  A
Sbjct: 155 TLTPSEFEVLHLIGQGHSSQEIAKLLCRSIKTIETHRFNIRVKLHLKDGADLIRYA 210


>UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159
           RepID=B9L1R6_THERP
          Length = 221

 Score = 49.3 bits (116), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 9/74 (12%)

Query: 134 VRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           + QA  R   Q Y++ +RT         LS  ERE+LR  + GY+  +IA+QL  + KT+
Sbjct: 128 IDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLFLSPKTV 187

Query: 185 RAHKFNVMSKLGVS 198
             ++  VM KLG S
Sbjct: 188 ETYRHRVMQKLGFS 201


>UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24
           Tax=Gammaproteobacteria RepID=C6C961_DICDC
          Length = 211

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 8/202 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NVALI+  ++   G   L     G+   +  Y S      ++ +++    +    AM  E
Sbjct: 5   NVALIDDHIVVRSGFAQLL-SLEGDIQVVGQYASAADAGVSLLKLNVDVAVMDI-AMPDE 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GLS L  L  K P  R ++++  D  A +  +L       +  +    E+      +
Sbjct: 63  --SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAV 120

Query: 130 SLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
              G     D +    +  Q       L+P EREI   +  G S+  IAEQL  + KT+ 
Sbjct: 121 HAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVH 180

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            H+ NV+ KL  ++   L+  A
Sbjct: 181 VHRANVLDKLHCATTVELVHFA 202


>UniRef50_B8IYZ1 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfovibrio desulfuricans subsp. desulfuricans
           str. ATCC 27774 RepID=B8IYZ1_DESDA
          Length = 223

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 13/122 (10%)

Query: 97  IEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS-----------LNGVRQATDRLNNQW 145
           I+  ++G +  S   GVL +A    +   E+FLS           L   RQA D      
Sbjct: 96  IDLGIMGHVRKSEPPGVLLRAIE-NVRRGEIFLSFSDPGGRLAALLRERRQAVDESGGDG 154

Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
             + S  LSP E+EI R ++ G+S+  IA  L  + KT+  HK+N+++KL   S   L++
Sbjct: 155 CGDLS-ALSPREKEIFRLLADGHSVKAIAGDLHISPKTVETHKYNLLTKLQAGSVGDLVK 213

Query: 206 AA 207
            A
Sbjct: 214 IA 215


>UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio
           magneticus RS-1 RepID=C4XNR8_DESMR
          Length = 220

 Score = 49.3 bits (116), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 43/188 (22%)

Query: 45  ESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVI-------ADDDI 97
           E+    + R+    ++   S     R  GL C+ EL  +    + LV+         + +
Sbjct: 39  EALLALVERVPAEVLVLDLSM---PRVSGLECIKELKSRGQEIKILVLTMHGREYVKEAM 95

Query: 98  EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGV---RQATDRLNNQWYINQSRTLS 154
            A  +G +    LD              ELF+++  V   R+     N +  ++Q   LS
Sbjct: 96  AAGALGYIEKQALD-------------SELFVAIRTVASGRRYMSPDNAEVLLDQ--LLS 140

Query: 155 PT---------------EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           PT               ERE+L+ + RG+++TQIA  L  ++KTI  HK +VM KL ++ 
Sbjct: 141 PTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHLSVKTIDTHKTHVMEKLNLTH 200

Query: 200 DAGLLEAA 207
            + L++ A
Sbjct: 201 KSQLVDYA 208


>UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2
           Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME
          Length = 215

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           LSP ERE+LR +++G S+ +IA +  R+ KTI   K   M+KLG++ D
Sbjct: 153 LSPREREVLRLLAQGLSLREIAARFNRSRKTISVQKCAAMAKLGLTHD 200


>UniRef50_C3QQ50 Transcriptional regulator n=2 Tax=Bacteroides RepID=C3QQ50_9BACE
          Length = 216

 Score = 48.9 bits (115), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 15/140 (10%)

Query: 83  KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLN 142
           +FPR R ++ +++ +    I  +S     G++ K ++ E  H  L  + +G R    ++ 
Sbjct: 75  RFPRVRWILFSNE-LSEDFIRRMSIERNIGMILKENSGEEIHSALMCTAHGERFLCHQIT 133

Query: 143 NQWYINQSR-----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           N   I   +      L+ TE +IL+ ++ G S+ +IA +   +I TI  HK N+  KLGV
Sbjct: 134 NLLIIGSDKPEIHSVLTVTEIDILKLIAHGKSVKEIALERTSSIHTIITHKKNIFRKLGV 193

Query: 198 SS---------DAGLLEAAD 208
           ++          AGL+E  +
Sbjct: 194 NNVYEATKYTLRAGLIEMVE 213


>UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B1K7T3_BURCC
          Length = 241

 Score = 48.5 bits (114), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 37/61 (60%)

Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           ++Q++ LS  E E++R  + G ++ +IAE+L R+ KTI   K   M KLGV  D  LL  
Sbjct: 152 VDQAQNLSSREIEVVRLYASGMTVNEIAEKLSRSKKTISTQKARAMQKLGVEKDIDLLRY 211

Query: 207 A 207
           A
Sbjct: 212 A 212


>UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2
           Tax=Proteobacteria RepID=A9BU04_DELAS
          Length = 217

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 27/149 (18%)

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +GL  +  L   FP  + LV+        +I +L  + + GVL K   L     ++  +L
Sbjct: 68  DGLRYVDYLIRHFPDIKVLVLTTVS-NPMIISALYDAGVAGVLLKEDPL----TQIMAAL 122

Query: 132 NGVRQATDRLNNQWY-----------------INQSRTLSPTEREILRFMSRGYSMTQIA 174
             VR     LN ++Y                   ++ +LSP E E+LR  + G S+T+IA
Sbjct: 123 QCVR-----LNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIA 177

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
            +L+R++KT+   K + M KL V S+  L
Sbjct: 178 ARLRRSVKTVSLQKNSAMRKLNVDSNQDL 206


>UniRef50_C6P0R1 Two component transcriptional regulator, LuxR family n=1
           Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0R1_9PROT
          Length = 222

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 1/80 (1%)

Query: 121 EIFHQELFLSLN-GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +I   +L+LS     R     + NQ   +    LSPTE E+L  +  G   ++IA +L R
Sbjct: 126 KILQGDLYLSDQMHSRMLKKMMGNQKSDSPVANLSPTELEVLHLVGLGMGTSEIAAKLVR 185

Query: 180 NIKTIRAHKFNVMSKLGVSS 199
           +IKTI +HK N+  KL + S
Sbjct: 186 SIKTIESHKANIKKKLNLDS 205


>UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales
           RepID=C0ZDE8_BREBN
          Length = 214

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 143 NQWYINQSRTLSPT----EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           N W  + ++TL       E+E++R +  GYS  ++A++L  ++KT+  HK N+M KLG+ 
Sbjct: 136 NLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVKTVENHKTNIMQKLGLD 195

Query: 199 SDAGLLEAA 207
           S   L++ A
Sbjct: 196 SKHQLIQYA 204


>UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YIR2_THEYD
          Length = 213

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 27/201 (13%)

Query: 26  SLFRK-----FAGNPYKLHTYTSQESFQ--DAMSRISFAAVIFSFSAMRSERREGLSCLT 78
           +LFRK         PY      ++  ++  D +S+ SF  ++F   AM      G+  L 
Sbjct: 14  TLFRKGLKEILLDTPYIKECKEAKSGYEAIDILSKESFD-IVFLDIAMSD--INGIETLK 70

Query: 79  ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138
           ++ I +P T+ L+++    E   I SL      G L+K++  E    EL  +++ + +  
Sbjct: 71  KIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPE----ELLKAVDKIIKGG 125

Query: 139 DRLNNQW------YINQSRTLSPTER------EILRFMSRGYSMTQIAEQLKRNIKTIRA 186
             L + +      YI++S  + P E+      ++   +++G S+ +I+++L  +IKT+  
Sbjct: 126 KYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKELSISIKTVST 185

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           ++  ++ KLG+ ++A ++  A
Sbjct: 186 YRARILEKLGLENNAEIINYA 206


>UniRef50_Q04UI4 Receiver component of a two-component response regulator n=4
           Tax=Leptospira RepID=Q04UI4_LEPBJ
          Length = 233

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 101/218 (46%), Gaps = 25/218 (11%)

Query: 1   MEHSRIKKRN-----VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS 55
           M HS+I ++      V++IE    +++ ++ L    +   +  H   SQ++ +D    I 
Sbjct: 1   MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQKAIEDIPENIP 60

Query: 56  FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS 115
              ++     +    + GL CL EL  K P T+ ++    + E +++ ++    + G L 
Sbjct: 61  DIVIL----DIGLPGKNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQ-GGVSGYLL 115

Query: 116 KASTLEIFHQELFLSLNG------------VRQATDRLNNQWYINQSRTLSPTER--EIL 161
           K +  E+F  EL + + G            +R+ T +  NQ    Q+ TL  T+R  +IL
Sbjct: 116 KDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQN-TLGLTKRQLQIL 174

Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            F++ G ++  IA++L  +  T+  H   +  K+ V S
Sbjct: 175 NFVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHS 212


>UniRef50_A1VAY8 Two component transcriptional regulator, LuxR family n=3
           Tax=Desulfovibrio vulgaris RepID=A1VAY8_DESVV
          Length = 235

 Score = 48.5 bits (114), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 13/104 (12%)

Query: 111 DGVLSKASTLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRT-----LSPTE 157
           DG+L K +  E        +     F+S +   +   R    W +   RT     L+P E
Sbjct: 109 DGLLLKEADHEEVRFAVRSVLAGGFFVSPSVAGRLATRCRQGWALEDRRTGGWEALTPRE 168

Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           RE+L +++ G+   +IA+ L  + KT+  H+ N M+KLG+ S A
Sbjct: 169 REVLHYVAEGFRNREIADLLVVSEKTVEKHRANFMAKLGLHSAA 212


>UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK
          Length = 210

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           L+P ERE++  +  G S++ I+++L R+ KTI  HK     KLGVSSDA L     +L+
Sbjct: 152 LTPREREVVNLILIGMSISDISKKLVRDRKTISGHKQTAYRKLGVSSDAELFSIKHLLM 210


>UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1
           Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO
          Length = 222

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 39/57 (68%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
            ++  L+  E E+L +++ G S+++IA + +R+IKTI   K +VM KLG+ +D GL+
Sbjct: 150 KEANRLTKKEWEVLLWIAEGMSVSEIASKKQRSIKTISTQKRSVMKKLGIKNDFGLM 206


>UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1
           Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0
          Length = 217

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           +TLSP E E+LR   +G  +  IA+QL R+ KTI   K   M KLGV ++  L+      
Sbjct: 154 KTLSPRELEVLRLFVQGKPIVDIAKQLNRSDKTISLQKNAAMRKLGVDNNQALIS----- 208

Query: 211 LCMRH 215
            C+ H
Sbjct: 209 YCLTH 213


>UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL
          Length = 215

 Score = 48.1 bits (113), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 85/182 (46%), Gaps = 16/182 (8%)

Query: 38  LHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDD 96
           +H   + +   DA+S++    V+  FS  R +R  +G   L EL  + P  + +V+    
Sbjct: 32  VHQCANGKDLLDALSKVETDLVVTDFSMTREDRSVDGFGLLAELRRRHPDVK-IVLLTAL 90

Query: 97  IEARL--------IGSLSPSPLDGV--LSKASTLEIFHQELFLSLNGVRQATDRLNNQWY 146
           + A +        +G+L  S  D +  L++A       +  +LS     Q+     +  +
Sbjct: 91  VNAGIFTRALSVGVGALV-SKTDSISELARACARVKISRSPYLS--PAVQSIIHGASMDH 147

Query: 147 INQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
            N S+  L+P E E++R +  G S+ QIA QL R+  TI   K+N   K+G +S   L+ 
Sbjct: 148 PNTSKARLTPKELEVVRLLVAGRSLAQIASQLGRSPSTISTQKYNASRKIGATSYTQLIR 207

Query: 206 AA 207
            A
Sbjct: 208 YA 209


>UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37
           Tax=Bacteria RepID=D1AEE5_THECD
          Length = 244

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 19/144 (13%)

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ---- 125
           R  GL    EL+  +PR R L++   D E  L  +L       VL   +  ++       
Sbjct: 90  RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDLVQACRAA 149

Query: 126 ---ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAE 175
              E FL    +      +  + Y+ Q+R        L+P E EIL+ ++ G+S  +IA+
Sbjct: 150 VRGEPFLYPGAIS-----VLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREIAD 204

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSS 199
            L  ++KT+  H+ N+++KLG+  
Sbjct: 205 TLFISVKTVERHRANILAKLGMKD 228


>UniRef50_A0NVX8 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Labrenzia aggregata IAM 12614 RepID=A0NVX8_9RHOB
          Length = 217

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 2/136 (1%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+  L E A ++ +  R+V+        LI  L  + +DG+ SKAS    F+Q+L   L 
Sbjct: 71  GVEVLIE-ARRWSKETRVVVLTGISAVGLISDLIETGVDGLFSKASDNAEFYQKLPGILR 129

Query: 133 GVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191
           G R  +D  L           L+  ER+ L  +  G S  +IAE L  +IKT+  H+ ++
Sbjct: 130 GQRHISDVFLKILEETPAPPVLTDRERQTLNLILAGRSNKEIAEGLGISIKTVDKHRTSL 189

Query: 192 MSKLGVSSDAGLLEAA 207
           M KL V S   L+  A
Sbjct: 190 MQKLNVHSVPQLMAKA 205


>UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1
           Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q024Y7_SOLUE
          Length = 225

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+   TEL    P  + ++++  D E  ++ ++       VL KAS+ E+      ++  
Sbjct: 63  GIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTVARG 122

Query: 133 GV---RQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           G     Q +DRL  +       T        LSP E ++LR ++ G +   IA  L   +
Sbjct: 123 GSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLDLGL 182

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +T+R+++  +M KLGV++ AGL + A
Sbjct: 183 QTVRSYRKTMMKKLGVNNVAGLTQLA 208


>UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1
           Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF
          Length = 212

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 33/48 (68%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           +L+  ERE+LR +++G S  ++A QL  + KT+  H+ NVM KLG SS
Sbjct: 149 SLTQREREVLRLLAQGDSNREVAGQLSISAKTVETHRANVMRKLGASS 196


>UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria
           RepID=A6V5P3_PSEA7
          Length = 221

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 76/174 (43%), Gaps = 21/174 (12%)

Query: 60  IFSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDDIEARLI-GSLSPSPLDGVLSKA 117
           I  +S    ER  +GL  +  L   FPRTR L+     +  RLI  SL    + GV+ K+
Sbjct: 59  ITDYSMPGDERYGDGLKLIDYLLRNFPRTRVLIFTM--VSNRLILDSLYDHGVAGVVLKS 116

Query: 118 STLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169
             L+        +    ++   + +  A    +     N+   LS  E E+LR    G +
Sbjct: 117 GELDELLLALDVVLQNRIYRGAHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNN 176

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223
           +  IA  LKR++KT+   K + M KL V+SD  L         M  C  +N+ H
Sbjct: 177 VCDIARLLKRSVKTVSTQKISAMRKLEVNSDQAL---------MTFCVRANLFH 221


>UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC
          Length = 213

 Score = 47.8 bits (112), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 7/162 (4%)

Query: 51  MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110
           ++ ++   VI  FS   + R +GL+ L+ L  +      +V+ +      L   L+   L
Sbjct: 43  LAHVACDVVITDFSMPNTGRADGLAMLSTLRREHGALPVIVLTNMANAGLLRAMLNEGVL 102

Query: 111 DGVLSKASTLEIF-------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRF 163
             V   A   E+F          +++S    R+ T     +    ++  L+P E E+LR 
Sbjct: 103 GIVEKGAEKSELFAAVRTALRGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRL 162

Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           ++ G S T++ + L R IKT+   K +   KLG+ SDA L E
Sbjct: 163 LASGKSPTEVGQMLHRTIKTVSWAKTSAKRKLGLKSDAELYE 204


>UniRef50_A3U840 DNA-binding response regulator, LuxR family protein n=1
           Tax=Croceibacter atlanticus HTCC2559 RepID=A3U840_9FLAO
          Length = 210

 Score = 47.4 bits (111), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 39/64 (60%)

Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           +++ R LS  E E+L F+S+G     IAE LK N KT+  +K  +  KL V S AGL++ 
Sbjct: 144 VSKYRALSSREIEVLNFISKGLKNKDIAEMLKINEKTVSTYKTRLQKKLNVDSVAGLIKQ 203

Query: 207 ADIL 210
           + +L
Sbjct: 204 SKML 207


>UniRef50_Q391P2 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia sp. 383 RepID=Q391P2_BURS3
          Length = 216

 Score = 47.4 bits (111), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           LSP E EILR +  G +  QIAE++  +  T+ AH+ N+  KLG+ ++A L+
Sbjct: 152 LSPREIEILRMIGEGLTKQQIAERIGHSANTVEAHRTNIKRKLGLDNNAELI 203


>UniRef50_UPI0001744DFC response regulator with a HTH DNA-binding domain n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001744DFC
          Length = 224

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           N   TL+  E E+ +++SRGY   +IAE+L   IKTI  H+ N+M++L + +
Sbjct: 155 NPLSTLTDREMEVFQWLSRGYGTKRIAERLGLGIKTIETHRANIMARLDLHT 206


>UniRef50_B5JQZ3 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235
           RepID=B5JQZ3_9BACT
          Length = 222

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LS  ERE+L+ ++ G+S  QIAE L+ ++KTI AH+ N+M KL   S   L   A
Sbjct: 147 LSNREREVLQAVAEGFSTKQIAEMLEVSVKTIEAHRANLMKKLDARSAVELTRCA 201


>UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZJS0_9SPHI
          Length = 223

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 44/68 (64%)

Query: 140 RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           +++++  ++    ++P ERE+L  + + Y+  +IA+QL  +I+T+  H+ N+++K GV +
Sbjct: 146 QISSKPKVDDDVHMTPREREVLALILKEYTTQEIADQLFVSIRTVETHRKNLLTKFGVKN 205

Query: 200 DAGLLEAA 207
             GL+  A
Sbjct: 206 VVGLVVKA 213


>UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A5E6_GEMAT
          Length = 213

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 12/143 (8%)

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +GL  L  +  K   TR LV++  D E  L+G    +  DG L K S       ELF ++
Sbjct: 64  DGLETLRRVRAKGLTTRVLVLSMHD-ETHLVGQALSAGADGYLLKDS----MDDELFFAI 118

Query: 132 NGVRQ-------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             V +       A DR   Q    +  +L+  ERE+L+ ++ G + + +AE L  +  T 
Sbjct: 119 ESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHTA 178

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             H+ N+M KL V +   L+  A
Sbjct: 179 TRHRANLMQKLNVHNQVELVRIA 201


>UniRef50_Q47I89 Two component transcriptional regulator, LuxR family n=3
           Tax=Betaproteobacteria RepID=Q47I89_DECAR
          Length = 203

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 35/52 (67%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           L+P E+E++  +  GY   +IAE+L  +++T+  HK +VMSKL V S A L+
Sbjct: 145 LTPREQEVMNLVVGGYHNREIAEKLGISVRTVEVHKAHVMSKLDVDSVADLV 196


>UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD
          Length = 224

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 143 NQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           N   ++ SRT   LSP E E+L  +++GY+  ++A+ L  ++KT+  H+ ++M ++G+ S
Sbjct: 137 NAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHISVKTVETHRQHIMRRIGLHS 196

Query: 200 DAGLLEAA 207
            A L+  A
Sbjct: 197 RAALVRYA 204


>UniRef50_Q4KCH0 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4KCH0_PSEF5
          Length = 251

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           TLSP E E+LR    G  ++QIA +  R+IKTI   K     KLG+ +DA L +
Sbjct: 163 TLSPKENEVLRCFLDGLRISQIASKFSRSIKTISGQKQAAFRKLGIRTDAELFK 216


>UniRef50_C6E2Z2 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter sp. M21 RepID=C6E2Z2_GEOSM
          Length = 215

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 2/70 (2%)

Query: 140 RLNNQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           R  + W   Q +   L+P E +I+  +++G S   ++EQL  ++KT+ AH+ ++M KLG+
Sbjct: 137 RKGSTWSAAQPQQVILTPREHDIMVLLAQGKSSRAVSEQLLISVKTVEAHRAHIMKKLGL 196

Query: 198 SSDAGLLEAA 207
           S  A L + A
Sbjct: 197 SGMAALAKYA 206


>UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B2JIJ8_BURP8
          Length = 235

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 134 VRQATDRLN-NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192
           V+ A D L  N    N    LS  E E++R    G ++ +I+EQL R+IKTI   K   M
Sbjct: 135 VKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIKTISTQKNTAM 194

Query: 193 SKLGVSSDAGLLEAA 207
            KLG+  D+ L + A
Sbjct: 195 RKLGLERDSELFQYA 209


>UniRef50_B5JNS6 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235
           RepID=B5JNS6_9BACT
          Length = 220

 Score = 47.0 bits (110), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 67/126 (53%), Gaps = 8/126 (6%)

Query: 85  PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNG---VR-QATDR 140
           P  + L+I+  + + + IGSL    + G L+K     +F Q +    NG   V+  A  +
Sbjct: 84  PEAKILIISSVE-DPKRIGSLLQMGVTGFLNKKEEFSVFEQAIEAVANGNIFVKASAQTQ 142

Query: 141 LNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
            ++   ++Q     TLS  E++I+ F++ G +  +IA+ L  +IKT+ +H+ N+  KL +
Sbjct: 143 SDSPDVLDQKELLETLSDREKQIVVFVASGMTNKEIAQNLGLSIKTVESHRSNISKKLKI 202

Query: 198 SSDAGL 203
              AG+
Sbjct: 203 FDIAGV 208


>UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2
           Tax=Flavobacterium RepID=A5FAW2_FLAJ1
          Length = 219

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 1/72 (1%)

Query: 136 QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195
           Q   +LN   YI ++  LSP E EI+  +   YS  +I+E+L  ++ T+  H+ N+M KL
Sbjct: 141 QNNPKLNKNVYI-ENPILSPREIEIVTLICLEYSGKEISEKLFISVNTVETHRKNIMKKL 199

Query: 196 GVSSDAGLLEAA 207
            + +  GL++ A
Sbjct: 200 NIKNTIGLVKYA 211


>UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4
           Tax=Proteobacteria RepID=B0TSG4_SHEHH
          Length = 222

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 39/57 (68%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + L+  +R+IL+ ++ GYS  +IAE++  +IKT+  H+ ++MS+L +   AGL+  A
Sbjct: 152 KLLTSRQRQILQLIAEGYSTREIAERMSVSIKTVETHRAHIMSRLNIFDIAGLVRFA 208


>UniRef50_A4VGJ9 DNA-binding response regulator CorR n=1 Tax=Pseudomonas stutzeri
           A1501 RepID=A4VGJ9_PSEU5
          Length = 218

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%)

Query: 135 RQATDRLNNQW----YINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
           R  T+RL  QW     + +S+T L+  EREIL    +G S  +IAEQL  +  TI++H  
Sbjct: 129 RVLTERLLGQWRRMRQLAESKTSLTLREREILSLAGKGLSNAEIAEQLCLSPHTIKSHIH 188

Query: 190 NVMSKLGVSSDAGLLEAADIL 210
           N++ K+G S+ A   EAA +L
Sbjct: 189 NLLRKIGASNRA---EAAYLL 206


>UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=2
           Tax=Coriobacteriaceae RepID=C7MN84_CRYCD
          Length = 215

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 49  DAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPS 108
           D ++R+    ++   S    E   GL     ++  FP TR +++   +    L  +L   
Sbjct: 41  DLVARVEPHVLLLDISMPPGEN--GLIACERISCDFPSTRIIILTMFEETDYLFYTLRGG 98

Query: 109 PLDGVLSKAST-------LEIFHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTER 158
               VL  +ST        ++   E ++  N  +  + +L+ Q  +   N    LS  E 
Sbjct: 99  AAGYVLKNSSTEVLLGAIRKVATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREF 158

Query: 159 EILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           EI   +++GY+  + A++L  ++KT+  H+  + +KLGV+S A L+  A
Sbjct: 159 EIFSLLAQGYTNKEAADKLFISVKTVETHRSKIYAKLGVNSRAELVHLA 207


>UniRef50_Q1AZV4 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacteria RepID=Q1AZV4_RUBXD
          Length = 222

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 32/47 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           L+P ERE+L+ ++ G S  +IAE+L  ++ T R H  N++SKLG  S
Sbjct: 156 LTPREREVLQALAEGLSNREIAERLHMSVDTERTHMVNILSKLGAHS 202


>UniRef50_C6WIE2 Transcriptional regulator, LuxR family n=1 Tax=Actinosynnema mirum
           DSM 43827 RepID=C6WIE2_ACTMD
          Length = 956

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           +LS  ERE+ R +S G +  +IAE+L  + KT+ AH   V +KLGV S  G+++
Sbjct: 897 SLSGREREVARLVSEGLTNREIAERLSLSAKTVEAHLARVFTKLGVRSRVGVVQ 950


>UniRef50_Q5E1C3 Two component response regulator n=17 Tax=Gammaproteobacteria
           RepID=Q5E1C3_VIBF1
          Length = 205

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 8/104 (7%)

Query: 107 PSPLDGVLSKASTLEIFH-----QELFLSL-NGVRQATDRLNNQWYINQSRTLSPTEREI 160
           P  +D +  KA   + F      +ELF+++ NG+  +  R  +Q       +L+  E+E+
Sbjct: 95  PMAVDAL--KAGAADFFQKPVDGEELFIAIKNGLAASEKRYKSQDAHRSYLSLTAREQEV 152

Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           L+ + +G    Q+A+ +  +++TI  H+ N+M KLGV+S   L+
Sbjct: 153 LKLIVQGMKNQQMADAMCVSLRTIEVHRSNLMKKLGVNSVVDLI 196


>UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM
          Length = 225

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 17/191 (8%)

Query: 28  FRKFAGNPYKLHTYTSQE---SFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKF 84
            R+  GN   +      E   S  DAMS++     +  FS    +  +G++ L  L  +F
Sbjct: 18  VREALGNEPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPGGKYGDGVALLGFLRRRF 77

Query: 85  PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--------HQELFLSLNGVRQ 136
                LV+       +++ S+  + +  +++KA  +             E +LS +  RQ
Sbjct: 78  AGIP-LVVLTGVGGTQVLASIRKAGVACIVAKADPISELASAIRAARKGEGYLSADVERQ 136

Query: 137 ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196
              R            L+  E E+LR ++ G S T+IA QL+R+ +TI   K + M KLG
Sbjct: 137 LASRPEGGEA-----HLTKREAEVLRLIAEGLSQTEIAAQLQRSRQTISTQKHSAMRKLG 191

Query: 197 VSSDAGLLEAA 207
           +   A + E A
Sbjct: 192 MQRPAEIFEYA 202


>UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT
          Length = 220

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + + +L+  ERE+L  +  G S  +IA+ L  ++KTI  H+  +M+KLGV + AGL+  A
Sbjct: 151 DPADSLTKREREVLTLVGEGKSSPEIAKILGLSVKTIEGHRGRIMAKLGVHNVAGLVRQA 210


>UniRef50_Q2T904 Capsula synthesis response regulator transcription regulator
           protein n=11 Tax=pseudomallei group RepID=Q2T904_BURTA
          Length = 265

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 31/48 (64%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           LSP E E+LR   +G+ + QIAE+L R+ KTI   K +   KLG+S D
Sbjct: 195 LSPRELEVLRLTLQGFEVGQIAEKLSRSNKTISTQKRSAYRKLGISGD 242


>UniRef50_B7GTT1 Two component transcriptional regulator, LuxR family n=1
           Tax=Bifidobacterium longum subsp. infantis ATCC 15697
           RepID=B7GTT1_BIFLI
          Length = 200

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%)

Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           +++ LSP E EI+   +RG SM+ IAE+L     T+R H  +  SKLGV+++  L+ A
Sbjct: 137 KNKDLSPREMEIVDRWARGRSMSDIAEELSIGQTTVRTHLEHAASKLGVANNRALISA 194


>UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4KCH2_PSEF5
          Length = 208

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 36/55 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+  E E+L+ ++ G +  +IAE+L  + KT+  HK N++SKLGV+S   L+  A
Sbjct: 148 LTNRELEVLKLLAEGLTNLEIAEKLHLSNKTVSGHKINILSKLGVTSVVDLVNIA 202


>UniRef50_C8WK28 Transcriptional regulator, LuxR family n=1 Tax=Eggerthella lenta
           DSM 2243 RepID=C8WK28_EGGLE
          Length = 499

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           R LSP ERE+L ++ RGY+   +AE+L  +  T+R H  ++ +KL ++S   LL   D
Sbjct: 436 RGLSPREREVLYYLGRGYNHGYVAEKLYISENTVRTHVRHIYAKLAINSREELLAMID 493


>UniRef50_C7LUF3 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LUF3_DESBD
          Length = 203

 Score = 47.0 bits (110), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 1/94 (1%)

Query: 112 GVLSKASTLEIFHQELFLSLNG-VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170
           G LSK S  E   + +   L+G +      L+++   +   TLS  ER++ R +++G +M
Sbjct: 99  GYLSKNSAPEELEEAMISILDGGIYVNPSLLDSRRSTSAMDTLSRQERDVARRLAKGETM 158

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           T IA+ +  ++KT   ++   M KLG+++ +GL+
Sbjct: 159 TAIAQAMGVSVKTASTYRTRAMRKLGIATTSGLI 192


>UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8
           Tax=Bacteria RepID=Q2RMH6_MOOTA
          Length = 221

 Score = 46.6 bits (109), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 12/149 (8%)

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
           R G+    EL  K P  + ++++  D E  +  +L       VL +A   E       + 
Sbjct: 62  RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121

Query: 124 HQELFLSLNGVRQATDRLNNQW-YINQSRTLSP--TERE--ILRFMSRGYSMTQIAEQLK 178
             E +L     R+  + L  +  +   SR   P  TERE  +LR  + G +  +IA +L 
Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            ++KT++AH+ N+M KLG+     L++ A
Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYA 210


>UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC
          Length = 223

 Score = 46.6 bits (109), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 31/52 (59%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           +LS  E EI R + RG S+T+IA    R+IKTI   K   M KLG  S+A L
Sbjct: 163 SLSERELEIFRMLGRGMSVTEIAMHTNRSIKTISHQKMRAMHKLGARSEADL 214


>UniRef50_C4LED9 Transcriptional regulator, LuxR family n=1 Tax=Tolumonas auensis
           DSM 9187 RepID=C4LED9_TOLAT
          Length = 301

 Score = 46.6 bits (109), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)

Query: 147 INQSRTLSPTERE--ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           IN +R +S T RE  + R M  GYS   IA++L  +++T++AHK ++ SKLG++S + L 
Sbjct: 197 INNTRGISLTLREMDVSRLMLGGYSSKGIAQKLAISVETVKAHKKHIYSKLGINSQSQLF 256


>UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235
           RepID=B5JP13_9BACT
          Length = 211

 Score = 46.2 bits (108), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 8/94 (8%)

Query: 110 LDGVLSKASTLE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREIL 161
           ++G+++K S++E        I    ++ S    +     + N+ Y +  + L+P E ++L
Sbjct: 97  VNGLVTKNSSIESLKDAIGQILKGAVYYSPEAYKLLRQPITNKDYNDSLKMLTPRETDVL 156

Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195
           + +  GYS  +IA     +++TI AH+ N+M KL
Sbjct: 157 QMVGEGYSSKEIARSFNLSVRTIDAHRSNIMRKL 190


>UniRef50_C5S952 Two component transcriptional regulator, LuxR family n=1
           Tax=Allochromatium vinosum DSM 180 RepID=C5S952_CHRVI
          Length = 208

 Score = 46.2 bits (108), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 36/54 (66%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           +L+P ERE++  + +G +   IA  L  +I+TI +H+ N+M KLGV S  GL++
Sbjct: 142 SLTPREREVMEALVQGKANKVIAADLGASIRTIESHRANLMHKLGVRSLPGLVQ 195


>UniRef50_Q7UXT1 Response regulator n=1 Tax=Rhodopirellula baltica
           RepID=Q7UXT1_RHOBA
          Length = 211

 Score = 46.2 bits (108), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)

Query: 145 WYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           W  +QS      +LSP EREIL  +  G    QIA QL  ++KT+ AH+ N++ K+ V S
Sbjct: 129 WLADQSVLKRIDSLSPREREILALVMDGRLSKQIASQLDISVKTVEAHRANILRKMHVDS 188


>UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderia RepID=B1K7T2_BURCC
          Length = 231

 Score = 46.2 bits (108), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 34/60 (56%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            ++  LS  E E++R  + G S+  IAEQL R+ KTI   K + M KLG+  D  L+  A
Sbjct: 149 GKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTISTQKSSAMQKLGIERDVDLVRYA 208


>UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA
          Length = 209

 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 16/130 (12%)

Query: 85  PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN- 143
           P+ R LV+   + E R+  +L+    DG   K    ++ H EL  ++N V      L   
Sbjct: 74  PQVRVLVLTVANCERRVAEALAAGA-DGYALK----KLGHGELMAAINAVCAGKTYLGPG 128

Query: 144 ------QWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193
                 + Y+  S     +L+  ERE+L+ ++RG+   +IA++L   IKT+  H+  +M 
Sbjct: 129 LSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIKTVETHRTKIMQ 188

Query: 194 KLGVSSDAGL 203
           KL + + A L
Sbjct: 189 KLDLHNSAEL 198


>UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3
           Tax=Stenotrophomonas RepID=B4SSH8_STRM5
          Length = 212

 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 8/102 (7%)

Query: 112 GVLSKASTLEIFHQELFLSLNG----VRQATDRLN--NQWYINQS--RTLSPTEREILRF 163
           G++ K+S+++   Q +     G     R   +R+     W + +   + LSP E E+LR 
Sbjct: 104 GLVDKSSSMDELPQAIQAVYRGQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRL 163

Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           +  G ++ +I+ QL +++ TI   K + M KLG+  DA L +
Sbjct: 164 LGTGMTVKEISLQLHKSVSTISRQKGDAMLKLGLKGDAELFD 205


>UniRef50_C4U6X8 Putative uncharacterized protein n=2 Tax=Yersinia aldovae ATCC
           35236 RepID=C4U6X8_YERAL
          Length = 144

 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 39/53 (73%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           + LS  E +++  +S+G+S+T++A+ L +++KT+ A K +VM+K+ V+++A  
Sbjct: 79  KVLSDAESKVISLISQGHSVTEVAKILNKSVKTVSAQKKSVMNKINVTNNADF 131


>UniRef50_Q48GV3 DNA-binding response regulator, LuxR family n=14 Tax=Pseudomonas
           RepID=Q48GV3_PSE14
          Length = 220

 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 10/93 (10%)

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           I H  +  +L G R    R   + Y   +R L     EILR + RG S  +IA+ L  +I
Sbjct: 130 IAHTVIERALRGTRSDRARAAKERYHLTARQL-----EILRLIVRGKSTREIADGLGLSI 184

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           KTI  H+  VM +L +   AGL     +L C+R
Sbjct: 185 KTIETHRSQVMKRLQIFDVAGL-----VLFCVR 212


>UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti
           RepID=Q98DH9_RHILO
          Length = 215

 Score = 45.8 bits (107), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           SR L+  ERE++RF+S G S  +IA +L  ++KT+ +H+   M KLG+ +   L+  A
Sbjct: 150 SRNLTNREREVVRFVSEGESNKRIAARLGVSVKTVDSHRTTAMRKLGLRNAVDLVRYA 207


>UniRef50_UPI00016AA17B two component transcriptional regulator, LuxR family protein n=2
           Tax=Burkholderia oklahomensis RepID=UPI00016AA17B
          Length = 97

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 35/56 (62%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           TLSP ER++L  + RG +  +IAE L  +++T+  ++  +M KLGV    GL+  A
Sbjct: 31  TLSPRERQVLNRVVRGRTSARIAEWLHLSVETVETYRLRLMRKLGVGDITGLMRLA 86


>UniRef50_Q5P6A6 Two-component response regulator n=4 Tax=Rhodocyclaceae
           RepID=Q5P6A6_AZOSE
          Length = 218

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 77/179 (43%), Gaps = 11/179 (6%)

Query: 41  YTSQESFQDAMSRISFAAVIFSFSAMRSERREGLS---CLTELAIKFPRTRRLVIADDDI 97
           Y S ++F DA    S+  +I     +R +   GL     L       P        D  I
Sbjct: 37  YDSAQAFLDADISCSYGCLILD---VRMQALSGLQLQEALCARGFSLPIIFLSAYGDAQI 93

Query: 98  EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTE 157
            A+ I   +   L         L+  +  L LS   + + +++L    Y +   +LS  E
Sbjct: 94  GAQAIKKGAIDFLQKPYRNQDLLDAVNAALTLSKEAMGKQSEKLK---YRDCLESLSQRE 150

Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           +EIL  +  G S  ++A  L  + KT+ AH+  +MSKLGV S   L++ A  +L   HC
Sbjct: 151 KEILDLVVGGNSSKEVARILGISHKTVEAHRGRLMSKLGVKSLGELIQLA--MLTSSHC 207


>UniRef50_UPI00018267FE transcriptional regulator, LuxR family protein n=1 Tax=Enterobacter
           cancerogenus ATCC 35316 RepID=UPI00018267FE
          Length = 210

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 8/136 (5%)

Query: 72  EGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF- 128
           E  SCL EL     R + ++I   DDD  A  +GS     +   +S+ ++L    QEL  
Sbjct: 58  ECFSCLPELH---ARQKGIIIGFVDDDRRACALGSCFEDII--FISRRASLARMRQELCR 112

Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188
           L  N  R    +     +  Q + LSP +  I+  + +G ++ QIA +L+ + KT+  HK
Sbjct: 113 LWHNLQRPEYHQQAVSCFDCQQKYLSPQQIRIMIGLHKGMTVLQIANKLRISGKTVFTHK 172

Query: 189 FNVMSKLGVSSDAGLL 204
           +  M K  + SD  L+
Sbjct: 173 YMAMQKFNLRSDYELV 188


>UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas
           fluorescens SBW25 RepID=C3K5C3_PSEFS
          Length = 211

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LS  ERE++R ++ G +++QIA ++ R+I TI   K   MS+L +S+D  L   A
Sbjct: 150 LSGKEREVVRMLASGMTVSQIAARVNRSISTISKQKSTAMSRLCISTDVDLFAYA 204


>UniRef50_Q0S8Z3 Response regulator, two-component system n=6 Tax=Actinomycetales
           RepID=Q0S8Z3_RHOSR
          Length = 223

 Score = 45.4 bits (106), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 17/75 (22%)

Query: 146 YINQSRTLSPT--------EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           ++  SR + PT        ERE+L  ++RGY    I+ +L  + KT+R H  NV++KLGV
Sbjct: 145 FMAASRRVGPTVFPELTDREREVLDLVARGYDNASISRRLVLSPKTVRNHVSNVLAKLGV 204

Query: 198 ---------SSDAGL 203
                    + DAGL
Sbjct: 205 PDRPAAIVRARDAGL 219


>UniRef50_A5FJ00 Two component transcriptional regulator, LuxR family n=3
           Tax=Flavobacteriales RepID=A5FJ00_FLAJ1
          Length = 209

 Score = 45.4 bits (106), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 83/195 (42%), Gaps = 25/195 (12%)

Query: 40  TYTSQESFQDAMSRISFAAVIFSFSAMRS-------------ERREGLSCLTELA---IK 83
           T+   +S+     +IS  A + +FS +R                 EGLS + E+      
Sbjct: 13  THFGVKSYFKDHDQISIVANVGNFSMVRDILQTKEIDILILDLDLEGLSSIFEVKSILKN 72

Query: 84  FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNG--VRQATDRL 141
           FP+T+ +VI  D  E     +   + + G + K   LE     +     G  +   T R 
Sbjct: 73  FPKTK-IVIFSDLAEQMYAPNAIKAGVSGYVHKTEKLETLGLSIIKVHEGKIIINETVRK 131

Query: 142 NNQWYINQS------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195
           N      QS      R LS  E E+LR++S G    +I++ L  N KTI  +K  +++KL
Sbjct: 132 NMALIAKQSKSERLYRKLSNREIEVLRYLSDGKKNNEISKILSLNEKTISTYKLRLLTKL 191

Query: 196 GVSSDAGLLEAADIL 210
            V++   L+  A  L
Sbjct: 192 NVTNLVDLVNKAKTL 206


>UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella
           RepID=A9IRH9_BORPD
          Length = 258

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/51 (45%), Positives = 34/51 (66%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           L+  E E+LR +++G S+TQ+A +L R+ KTI  HK   M KLG++ D  L
Sbjct: 194 LTTAEIEVLRQIAQGLSVTQLAARLLRSKKTISTHKRRAMKKLGLADDLAL 244


>UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21
           Tax=pseudomallei group RepID=C4I5I0_BURPS
          Length = 242

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 31/57 (54%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           R LS  E EI+R    G S+ +IA  L R+ + +   K N M KLG+  DAGL   A
Sbjct: 164 RQLSARELEIVRLYVSGLSVNEIAAYLHRSKQAVSTQKMNAMRKLGIERDAGLFRYA 220


>UniRef50_A5EKH3 Two component transcriptional regulator, LuxR family n=1
           Tax=Bradyrhizobium sp. BTAi1 RepID=A5EKH3_BRASB
          Length = 205

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 12/150 (8%)

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDD--------IEARLIGSLSPSPLDGVLSKASTL 120
           +R +GL  + E+  + P TR LV++  D        + A  +G ++   ++  L  A   
Sbjct: 47  DRDDGLDLIKEIKTRHPGTRSLVLSFYDEAAYAERALAAGALGYVTKQQMETTLLTA-IR 105

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQL 177
            +   E+++S    R+  +R  +   +  +   R LS  E ++ + +  G +  QIA  L
Sbjct: 106 RVLSGEIYMSEALQRRLAERYVSGHTLEATSTMRALSDRELQVFQLVGEGRTTRQIAAML 165

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            R+IKTI +H  ++ +KLG+ S A L + A
Sbjct: 166 GRSIKTIESHVEHIKNKLGIESAAELAQRA 195


>UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex
           RepID=A2WHU0_9BURK
          Length = 204

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 32/56 (57%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L+  E E+LR    G S+ +IA Q++R  +TI A K   M KLGV  D  L  AA
Sbjct: 124 SLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFRAA 179


>UniRef50_UPI0001C32085 transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C32085
          Length = 429

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 23/152 (15%)

Query: 48  QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSP 107
           QD + RI  +  +     + S R +G   LT+ A+   RT   V A       L GS+S 
Sbjct: 288 QDGVGRIRVSWRVTPAELLLSARDDGPGALTDAALAVHRTGERVAA-------LGGSVS- 339

Query: 108 SPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167
             +D V    +T+ +      L L  V             N    L+  E E+L  ++RG
Sbjct: 340 --VDAVAGWGTTVTVA-----LPLAPVESGPP--------NPLAVLNARELEVLAELARG 384

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
               QIAE L     T++ H  N++ KLGVSS
Sbjct: 385 GRNRQIAEALAITPHTVKFHVANILRKLGVSS 416


>UniRef50_Q11XC0 Fimbrial Z protein; probable signal transducer n=1 Tax=Cytophaga
           hutchinsonii ATCC 33406 RepID=Q11XC0_CYTH3
          Length = 212

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 5/124 (4%)

Query: 86  RTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH--QELFLSLNG-VRQATDRLN 142
           R + L+I+D D E  L+ ++       V    S  E+ H  Q+++ +    V   T  L 
Sbjct: 77  RVKFLIISDCDCELPLVMAVRAGVTGFVRKNVSKEELLHAVQQVYTNKEYYVSDVTQVLL 136

Query: 143 NQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
             +  NQ+     S  E E+LR++ +G S  QIA+ L  + KTI  H+ N+M K GV   
Sbjct: 137 KGFLANQTSDSIFSDRELEVLRYICKGRSNEQIADILFISEKTIATHRRNIMKKAGVKKS 196

Query: 201 AGLL 204
             L+
Sbjct: 197 TELI 200


>UniRef50_B9XRD7 Two component transcriptional regulator, LuxR family (Fragment) n=1
           Tax=bacterium Ellin514 RepID=B9XRD7_9BACT
          Length = 222

 Score = 45.1 bits (105), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            +   LS  ERE+L  +S+G    +IA+ L  NI+T+R H  N+  KL VSS
Sbjct: 165 GKEHPLSVREREVLELLSKGLPYKEIADMLGVNIETVRKHCHNIYEKLQVSS 216


>UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1
           Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS
          Length = 231

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 32/56 (57%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            LSP E E++R  + G  + +IA +L R+ KTI   K   M KLG+  D  L++ A
Sbjct: 164 VLSPKESEVVRLYAAGLRIDEIAAKLNRSKKTISTQKVKAMHKLGIERDIDLMKYA 219


>UniRef50_B2JQA9 Two component transcriptional regulator, LuxR family n=4
           Tax=Burkholderia RepID=B2JQA9_BURP8
          Length = 209

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 37/56 (66%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            LSP E E+L++++RG S  +IA +L  + KT+  +K  +  KLG+SS A L+E A
Sbjct: 147 VLSPREMEVLQYLARGVSNKEIASRLFLSDKTVSTYKTRLCEKLGLSSLAALIEFA 202


>UniRef50_Q89DY0 Two-component response regulator n=1 Tax=Bradyrhizobium japonicum
           RepID=Q89DY0_BRAJA
          Length = 225

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++ R L+P E+ +++ ++ GYS   I+  L  ++KT  AH+   M KL V+S AGL+  A
Sbjct: 158 DRGRGLTPREQLVVKLVAEGYSNKGISAILNLSVKTTEAHRAAAMRKLDVNSTAGLVRYA 217


>UniRef50_B4ELF5 Two-component regulatory system, response regulator protein n=5
           Tax=Burkholderiaceae RepID=B4ELF5_BURCJ
          Length = 238

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 31/52 (59%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           LSP E E+LR    G S++ IA +  R+ KTI A K +   KLG+ SDA L 
Sbjct: 175 LSPREHEVLRCFLAGMSVSDIASKFSRSPKTISAQKQSAFRKLGIRSDAELF 226


>UniRef50_D1ADV5 Transcriptional regulator, LuxR family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1ADV5_THECD
          Length = 956

 Score = 44.7 bits (104), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           LSP E E+ R +  G +  QIAE+L  +I+T+  H  N+ +KLGV S   ++ A
Sbjct: 893 LSPRELEVARLVMEGCTNQQIAERLFLSIRTVETHLSNIFAKLGVGSRVAMVSA 946


>UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR
          Length = 326

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 34/55 (61%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P ER+IL  + RG +   IA QL  +++T+  H+ N+  KLG+   A L++ A
Sbjct: 261 LTPRERDILHGIGRGQANKDIAVQLGVSVRTVETHRLNLKRKLGIEGRAELVKYA 315


>UniRef50_P0ADD8 Uncharacterized protein yjjQ n=85 Tax=Enterobacteriaceae
           RepID=YJJQ_ECO57
          Length = 241

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 36/53 (67%)

Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           +S  L+ +ER++LR + +G+ + QIA  LK++ KTI A K + M +L + S+A
Sbjct: 150 RSVILTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRLAIHSNA 202


>UniRef50_Q7NVE2 Capsula synthesis response regulator transcription regulator
           protein n=1 Tax=Chromobacterium violaceum
           RepID=Q7NVE2_CHRVO
          Length = 231

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/48 (47%), Positives = 32/48 (66%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           LSP ERE+LR    G S+++IA +  R+IKTI   K + + KLG+ SD
Sbjct: 171 LSPREREVLRCCLLGLSVSEIAVKFSRSIKTISNQKQSALKKLGLRSD 218


>UniRef50_C7C553 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis
           RepID=C7C553_9ENTR
          Length = 215

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 82  IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVL--SKASTLEIFHQELFLSLNGVRQATD 139
           +++ + R L++   + +A L+   +P  L  +L  +K S +     E+  + N     T 
Sbjct: 66  LQYRKKRSLIVGFYEGDAPLLQPRAPLCLKNMLYLNKRSPMNKIRNEILFAWN--ENVTG 123

Query: 140 RLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194
             N +W +   +T     LS  +++I  F  +G++  QIA  +  N KT+ AHK  +M K
Sbjct: 124 --NCEWVVPNCKTCSHVMLSKQQQKIALFTIKGFNNRQIAGLMNINAKTVSAHKHCIMEK 181

Query: 195 LGVSSDAGLL 204
             + ++A L+
Sbjct: 182 FNIDNNADLV 191


>UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32
           Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ
          Length = 231

 Score = 44.7 bits (104), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 35/56 (62%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            L+  ER+IL  + RG +  +IA QL  +++T+  H+ N+  KLG+   AGL++ A
Sbjct: 166 ALTRRERDILGCIGRGMANKEIATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYA 221


>UniRef50_D1R7I4 Putative uncharacterized protein n=1 Tax=Parachlamydia
           acanthamoebae str. Hall's coccus RepID=D1R7I4_9CHLA
          Length = 265

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 36/56 (64%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L+P E++IL+F+S GY  + IAEQL+ + +T+  +   +  KL  SS   L++ A
Sbjct: 199 SLTPREKDILKFVSNGYPASYIAEQLQLSQRTVENYIATIKCKLSCSSKVELIQEA 254


>UniRef50_Q9XAT8 ThcG n=1 Tax=Rhodococcus erythropolis RepID=Q9XAT8_RHOER
          Length = 927

 Score = 44.7 bits (104), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/58 (39%), Positives = 36/58 (62%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           L+P E E+ R  + G S  QIA +L  + +T+ +H ++V  KLG++S A L +A D L
Sbjct: 861 LTPQELEVARLAATGLSNPQIASRLFLSPRTVSSHLYHVFPKLGITSRAELRDALDAL 918


>UniRef50_C8QGG5 Two component transcriptional regulator, LuxR family n=1
           Tax=Pantoea sp. At-9b RepID=C8QGG5_9ENTR
          Length = 194

 Score = 44.7 bits (104), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 31/47 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           L+  E++I+  ++RG S  QIAEQL  + KT+  HK N++ K GV S
Sbjct: 136 LTEKEQQIVALLARGLSNLQIAEQLHISNKTVSTHKKNILEKTGVQS 182


>UniRef50_A8GBA0 Two component transcriptional regulator, LuxR family n=4
           Tax=Enterobacteriaceae RepID=A8GBA0_SERP5
          Length = 213

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 17/151 (11%)

Query: 56  FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGV 113
           FA VI         + +GL  L ++   +P+   L+    +++I AR+  +   +  +G 
Sbjct: 60  FALVILDIGL---PQVDGLQLLKKIRRHYPQQSILIYTAQEEEIYARMAYA---AGANGF 113

Query: 114 LSKASTLEIFHQELFLSLNGVRQA-----TDRLNNQWYINQSRTLSPTEREILRFMSRGY 168
           + K S LE    +L L++  V           +  +    +   L+P E +IL  +S+G 
Sbjct: 114 VHKGSRLE----QLVLAIETVLAGELSFPAAAMAEETQPTEGSLLTPKELQILGLLSKGL 169

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           S  QIAE L  + KT+  HK N++ K G S+
Sbjct: 170 SNLQIAEMLSISNKTVSTHKKNILRKTGASN 200


>UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1
           Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP
          Length = 226

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG-LLEAA 207
            L+P + EIL  +  G    +IA +L  ++KT+ AH+  +M +LGV   A  LLEAA
Sbjct: 152 VLTPRQTEILELIGSGLGTKEIARRLDLSVKTVEAHRAQIMERLGVRDIANLLLEAA 208


>UniRef50_B4SIR4 Two component transcriptional regulator, LuxR family n=2
           Tax=Stenotrophomonas maltophilia RepID=B4SIR4_STRM5
          Length = 208

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 5/93 (5%)

Query: 110 LDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQS-RTLSPTEREILRFMSRGY 168
           + GV+ KA  L +  + +      V Q   RL   + +      LS  ERE+L  +  G 
Sbjct: 108 IGGVVGKAEPLPMLSEAIVC----VHQGLGRLPPDFILPADCSELSRNEREVLELLLTGL 163

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           ++++IA +  R++KT+   K   + KLG+ +DA
Sbjct: 164 TVSEIALRRHRSVKTVSTQKIAALRKLGLRNDA 196


>UniRef50_Q7MV58 Transcriptional regulator, LuxR family n=2 Tax=Porphyromonas
           gingivalis RepID=Q7MV58_PORGI
          Length = 199

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           VA++E   M   G+E+L +K  G  YK+        F DA +   +  VI  +       
Sbjct: 8   VAIVEPLPMIRAGLEALLKKITG--YKIQ-------FIDAPADNGWVDVISFYCPDVVFM 58

Query: 71  REGLSCLT--ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +S LT  E     P++R + +    I++ ++ +      D  LS  +T+E    EL 
Sbjct: 59  NPLVSGLTRNESDKACPQSRYVGLLTTPIDSNMLHNY-----DDTLSVHATVE----ELK 109

Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188
             L  + Q T  L  +    + +TL+  E+EI+  + +G +  +IAE+L  +  T+  H+
Sbjct: 110 QLLERLYQKT--LEPEESGEEQQTLTNREKEIVVGVVKGMTNKEIAEELFLSTHTVITHR 167

Query: 189 FNVMSKLGVSSDAGL 203
            N+  KL + S +GL
Sbjct: 168 RNIAKKLQIHSPSGL 182


>UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ
          Length = 207

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 17/146 (11%)

Query: 73  GLSCLTELAIKFPRTRRLVIA-DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           G++    L  +FP  R L ++  +D+E   +     +   G +SKA+      QEL  ++
Sbjct: 62  GIALCQRLRERFPELRLLALSMHEDLE--YVRGFLQAGGQGYVSKAAV----DQELLDAV 115

Query: 132 NGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             V +    LN    +           +   LSP E E+LR +++G S  ++AE+L  + 
Sbjct: 116 LAVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISE 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  ++   M KLG++S + LL  A
Sbjct: 176 KTVATYRERGMEKLGLASRSELLRYA 201


>UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas
           aeruginosa PA7 RepID=A6V170_PSEA7
          Length = 213

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 34/51 (66%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           L+P E E+LR    G ++ +IA +L R+ +TI A K + M KLG+ ++AGL
Sbjct: 153 LTPREVEVLRLYGSGLAIGEIALRLCRSKQTISAQKSSAMRKLGLDTNAGL 203


>UniRef50_A4WED0 Response regulator receiver protein n=1 Tax=Enterobacter sp. 638
           RepID=A4WED0_ENT38
          Length = 204

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 32/49 (65%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
             +P E  +L ++ +G S ++I++ L R+ KTI +HK N+M KLGV  D
Sbjct: 142 VFTPAESTVLEYLRKGCSGSEISKLLFRSEKTISSHKRNIMGKLGVRDD 190


>UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12
           Tax=Xanthomonadaceae RepID=Q3BU15_XANC5
          Length = 221

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 85/196 (43%), Gaps = 17/196 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G+  L + FAG    +       + Q A+   S          +    
Sbjct: 14  VIIVDDHTLVRAGLSRLLQTFAG----IDVVGEASNAQQALDMTSLHRPDLVLMDLSLPG 69

Query: 71  REGLSCLTELAIKFPRTRRLVIA--DDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--- 125
           R GL  +T++    PRT  ++++  DD +  R   +L    +  V+  A+ LE+      
Sbjct: 70  RSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVR--DALDRGAVGFVVKDAAPLELELALRA 127

Query: 126 ----ELFLSLN-GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               ++FLS     +     L  +  +  +  LSP +REILR + RG S  +IA  L  +
Sbjct: 128 AAAGQVFLSPQISSKMIAPMLGREKPVGIA-ALSPRQREILREIGRGQSNKEIAADLGIS 186

Query: 181 IKTIRAHKFNVMSKLG 196
           +KT+  H+  +M  LG
Sbjct: 187 VKTVETHRARMMESLG 202


>UniRef50_C7ML75 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=1
           Tax=Cryptobacterium curtum DSM 15641 RepID=C7ML75_CRYCD
          Length = 472

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           S  L+  E EIL F+ RGYS++ IAE+L  +  T+R H  ++ +KLG+ S   L    D
Sbjct: 406 SDKLTNRENEILVFLGRGYSISYIAEKLFISESTVRTHVKHIYAKLGIHSREDLFALID 464


>UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA
          Length = 218

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 18/45 (40%), Positives = 31/45 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           L+P ER+ILR +++GY+  +I EQL  ++ T++ H   + +KL V
Sbjct: 159 LTPRERDILRLLAQGYTNQEIGEQLALSVGTVKNHLSVIFAKLAV 203


>UniRef50_A0QW50 Two-component system response regulator n=1 Tax=Mycobacterium
           smegmatis str. MC2 155 RepID=A0QW50_MYCS2
          Length = 163

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           TL+P ERE+L  M+ G+S T IA +L   +  +  H  N+  KLG+S
Sbjct: 98  TLTPREREVLGLMAEGHSNTGIAARLAVTVPAVERHVTNIFVKLGLS 144


>UniRef50_Q31FU6 Two component transcriptional regulator, LuxR family n=1
           Tax=Thiomicrospira crunogena XCL-2 RepID=Q31FU6_THICR
          Length = 232

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 50  AMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSP 109
           +M ++S  AVI        +++  +  +   A + P   + V+ D  +E   + S+S + 
Sbjct: 60  SMPKLSGLAVITQLK----KQKNPIKIIVLTAAEAPNVWKEVL-DLGVEGLALKSVSKAE 114

Query: 110 L-DGVLSKASTLEIFHQELFLSLNGV-----RQATDRLNNQWYINQSRTLSPTEREILRF 163
           L  G+ S  +     H E+  +L+        Q T   ++    ++ + LS  E+++++ 
Sbjct: 115 LVSGIKSVIADENFIHSEIQPALDAYLAELEGQKTPEEDSGDKPSRPKKLSVREKQVIKL 174

Query: 164 MSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++ GY    IA+ L+ + +T+  H+ N+M+KLG+++ A L+  A
Sbjct: 175 VAEGYKTKDIADMLEISDRTVSKHRENIMTKLGMTASAELVNYA 218


>UniRef50_A8GKY2 Transcriptional regulator, LuxR family n=2 Tax=Serratia
           RepID=A8GKY2_SERP5
          Length = 203

 Score = 44.3 bits (103), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYINQSR--TLSPTEREILRFMSRGYSMTQIAEQL 177
           LE F Q+ +++L+         +  W   Q R   LS  E+++L+ MS G S   IA  L
Sbjct: 115 LEQFCQQPWVALHA--------SGIWKCRQCRIAALSSCEKKVLKLMSTGMSACTIAGML 166

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGL 203
            R+ KTI AHK + M KL V     L
Sbjct: 167 HRSQKTISAHKRSAMRKLNVHKSTEL 192


>UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2
           Tax=Alteromonadales RepID=B1KE04_SHEWM
          Length = 206

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 65/129 (50%), Gaps = 4/129 (3%)

Query: 83  KFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGV---RQATD 139
           KFP  + L+++  D +  ++  L+       L   S  E+F+    +   G+   R  +D
Sbjct: 71  KFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIHNGGIYYSRAISD 130

Query: 140 RL-NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
            L  +    +++  L+  E+ +LR ++ G +  ++A +L  +++TI  H+ N+  KL + 
Sbjct: 131 LLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIETHRRNIKDKLAIK 190

Query: 199 SDAGLLEAA 207
           + AGL+  A
Sbjct: 191 TSAGLVRYA 199


>UniRef50_C5NV86 Oxygen regulatory protein NreC n=1 Tax=Gemella haemolysans ATCC
           10379 RepID=C5NV86_9BACL
          Length = 206

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 13/103 (12%)

Query: 112 GVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYI---------NQSRTLSPTEREILR 162
           G ++K++     H+E+ L+++ V    D   N+ Y          ++   LS  E+E+ R
Sbjct: 100 GYVTKSTA----HEEILLAIDKVMFKNDIYLNEKYATIFYELFKEDKEIELSEREKEVGR 155

Query: 163 FMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           ++  GY++T I E+L  ++KT+  +K  +M K      + L+E
Sbjct: 156 YIVEGYTLTDIGEKLFLSVKTVDTYKKRLMEKTNTKKRSELVE 198


>UniRef50_Q10550 Putative HTH-type transcriptional regulator Rv0890c/MT0914 n=67
           Tax=Mycobacterium RepID=Y890_MYCTU
          Length = 882

 Score = 43.9 bits (102), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 38/56 (67%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +L+PTER+++R +S G S   IA++L  + +T++ H  +V +KLG+ S   L++ A
Sbjct: 820 SLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEA 875


>UniRef50_UPI00016A3B5F transcriptional regulator FimZ n=1 Tax=Burkholderia ubonensis Bu
           RepID=UPI00016A3B5F
          Length = 169

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 36/60 (60%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           N++  L+  E  +LR ++RG S  QI E L  + KT+  +K N+  KLGVSS  GL + A
Sbjct: 104 NRTGGLTDRELTVLRGLARGSSNRQIGEDLCISNKTVSTYKSNIFEKLGVSSVVGLADYA 163


>UniRef50_D2QUB6 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QUB6_9SPHI
          Length = 213

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 39/59 (66%)

Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           Q  T+S  E ++L+ +++ +S TQIAE+L  +  T+  H+ ++M KLGV +  GL++ A
Sbjct: 149 QKITISKRELDVLKLIAQEFSGTQIAEKLFISPTTVETHRKHLMQKLGVQTTIGLVKYA 207


>UniRef50_D2SB03 Two component transcriptional regulator, LuxR family n=1
           Tax=Geodermatophilus obscurus DSM 43160
           RepID=D2SB03_9ACTO
          Length = 248

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            L+  EREIL  ++RG S   IA+QL  ++ T+R H  N+ +KLG  S
Sbjct: 184 VLTEREREILDLLARGLSNADIAQQLTISVHTVRNHVANLSAKLGAHS 231


>UniRef50_Q2W0G1 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Magnetospirillum
           magneticum AMB-1 RepID=Q2W0G1_MAGSA
          Length = 225

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 34/51 (66%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           LS  ER++L+ ++ GY+  ++A  L  ++KT+  H+ N+M+KLGV +   L
Sbjct: 164 LSGRERQVLKLLAEGYTNQKVAGILGISVKTVDRHRENIMNKLGVRTPVAL 214


>UniRef50_B5I095 Two component transcriptional regulator n=1 Tax=Streptomyces
           sviceus ATCC 29083 RepID=B5I095_9ACTO
          Length = 239

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 12/133 (9%)

Query: 77  LTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----LEIFHQELFLSLN 132
           + +LA    RTR LV++  D EA ++ +L  + + G L K ++    L   H        
Sbjct: 92  IEDLATMAARTRVLVLSGADEEAVIVPALR-AGVRGYLRKGASQQEILRCLHVIAAGGAA 150

Query: 133 GVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
                 +RL++ +   Q  T       L+  ER++L F++RGY+  +IA  L  + KT+R
Sbjct: 151 FGVGTAERLSSFFDGAQPETSNAAFPFLTERERQVLDFLARGYTNRRIARTLVLSEKTVR 210

Query: 186 AHKFNVMSKLGVS 198
            H  ++++KL V+
Sbjct: 211 NHVSHLLAKLQVN 223


>UniRef50_B0MWF4 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
           17216 RepID=B0MWF4_9BACT
          Length = 203

 Score = 43.9 bits (102), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           LS  E E+L  +++G    QIA++L+  + T+ +H+ N+M KLGV S A L+  A   + 
Sbjct: 133 LSVRETEVLTLIAQGLLNKQIADRLQIGLTTVISHRRNIMQKLGVQSVAALVICA---VS 189

Query: 213 MRHCETSNVLHPY 225
           M + + S++  P+
Sbjct: 190 MGYVDESDIRTPH 202


>UniRef50_C7M954 Transcriptional regulator, LuxR family n=2 Tax=Capnocytophaga
           RepID=C7M954_CAPOD
          Length = 234

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            L+P E+EIL   S+G+S  +IAEQL  +  T+  H+ N+  K  V S   L+EA D+
Sbjct: 173 VLTPREKEILTLASQGFSSKEIAEQLFISTYTVNRHRQNIREKFNVES---LIEAIDL 227


>UniRef50_B5HBI1 Two-component system response regulator n=23 Tax=Streptomyces
           RepID=B5HBI1_STRPR
          Length = 289

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           +L+P E+E+LR M  G     +AE+L  +  T+R H  NV+ KLGV S
Sbjct: 206 SLTPREQEVLRCMVAGLGRKAVAERLFLSPHTVRTHMQNVLGKLGVHS 253


>UniRef50_Q1IJ83 Two component transcriptional regulator, LuxR family n=2
           Tax=Candidatus Koribacter versatilis Ellin345
           RepID=Q1IJ83_ACIBL
          Length = 233

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 117 ASTLEIFHQELFLSLNGVRQATDR--LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
           AS  E+   + ++S    R+  D     ++  ++++  L+  +RE+L+ ++ G  M ++A
Sbjct: 133 ASVREVLRGKTYVSPTIPREMIDLSLWQHKKLVDETHKLTDRQREVLQLLAEGKGMKEVA 192

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             L    +T+  HK+ +M  LG  ++A L++ A
Sbjct: 193 AILNMTTRTVAFHKYRIMEVLGTKNNADLVKYA 225


>UniRef50_B1VE62 Two-component system response regulator n=3 Tax=Corynebacterium
           RepID=B1VE62_CORU7
          Length = 248

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 35/53 (66%), Gaps = 3/53 (5%)

Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194
            NQ  +++   L+P E E+LR ++RGY+  ++AE+L  ++KT+  H  N++ K
Sbjct: 181 GNQPNLDE---LTPREHEVLRLLARGYTYKEMAERLFISVKTVETHVSNILRK 230


>UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI
          Length = 218

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 44/77 (57%)

Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190
           L+G  Q   + +      +   LS  E+EIL+F+  G S  +IAE+L+ +++T+  H+ N
Sbjct: 136 LSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREIAEKLQLSVRTVDNHRAN 195

Query: 191 VMSKLGVSSDAGLLEAA 207
           +M +L V + A L+  A
Sbjct: 196 MMRRLQVRNAAELVRMA 212


>UniRef50_A7NFQ1 Transcriptional regulator, LuxR family n=1 Tax=Roseiflexus
           castenholzii DSM 13941 RepID=A7NFQ1_ROSCS
          Length = 454

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LS  EREILR ++ G +  QIA QL  +  T++ H  N+  K+GV+S
Sbjct: 9   LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVAS 55


>UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce
           56' RepID=A9FM25_SORC5
          Length = 233

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 11/139 (7%)

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------- 121
           R+G+  L  L  + P+ + LV++  D E R+  +L  +   G L K S LE         
Sbjct: 80  RDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALR-AGAQGYLVKTSKLEEVIEGIRRI 138

Query: 122 -IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                 L  S+ G      R            L+P ER++LR ++ G S  + A +L  +
Sbjct: 139 ATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVSTRETAARLTIS 198

Query: 181 IKTIRAHKFNVMSKLGVSS 199
            KT+  H+  + +KLG  S
Sbjct: 199 PKTVETHRVRIYAKLGCKS 217


>UniRef50_B1ZJJ2 Transcriptional regulator, LuxR family n=7 Tax=Methylobacterium
           RepID=B1ZJJ2_METPB
          Length = 241

 Score = 43.5 bits (101), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 31/47 (65%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSK 194
           + S  L+P E E+LRF+S G+S  ++A +L  +++T+  H+ N+  K
Sbjct: 155 DASAGLTPREAEVLRFLSAGFSNKEVARRLSLSVRTVETHRLNLRRK 201


>UniRef50_A3HVU5 Transcriptional regulator n=1 Tax=Algoriphagus sp. PR1
           RepID=A3HVU5_9SPHI
          Length = 209

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 36/49 (73%)

Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           +S  L+P+E++ILR +++G S  QIAE+L  + +T+  H+ N++SKL +
Sbjct: 142 ESSPLTPSEKKILRLIAQGESTKQIAEKLFISERTVDKHRSNMISKLNL 190


>UniRef50_C9XUX8 Uncharacterized protein yjjQ n=2 Tax=Cronobacter RepID=C9XUX8_CROTZ
          Length = 238

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 34/49 (69%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           L+ +E+++LR + +G+ + QIA+ LK++ KTI A K + M +L +  +A
Sbjct: 153 LTTSEKQVLRLLGKGWGINQIAQMLKKSNKTISAQKNSAMRRLSLRGNA 201


>UniRef50_A5UQJ6 Response regulator receiver protein n=1 Tax=Roseiflexus sp. RS-1
           RepID=A5UQJ6_ROSS1
          Length = 471

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LS  EREILR ++ G +  QIA QL  +  T++ H  N+  K+GV+S
Sbjct: 9   LSEREREILRLVATGATNQQIAAQLNISANTVKVHLRNIFGKIGVAS 55


>UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM
          Length = 216

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 69/145 (47%), Gaps = 12/145 (8%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLI---------GSLSPSPLDGVLSKASTLEIF 123
           GL CL  L    P  R +++   + +AR +         G +     D VL +A    ++
Sbjct: 64  GLECLKTLLANQPDLRVILLTMHE-DARYVKEGFALGAMGYVLKKAADDVLYQA-VRAVY 121

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             E+++  +  +     L  +   +  R  LS  E+++L  ++ GY+  +IAEQL  ++K
Sbjct: 122 SGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQLVISVK 181

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  +K+ +M KL     + L++ A
Sbjct: 182 TVETYKYRIMEKLNCKKRSDLVKFA 206


>UniRef50_A0JU95 Transcriptional regulator, LuxR family n=1 Tax=Arthrobacter sp.
           FB24 RepID=A0JU95_ARTS2
          Length = 910

 Score = 43.5 bits (101), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 37/57 (64%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           L+  ER++ R  S+G S  ++A +L+ +I+T+  H + + +K+G+SS + L  +A +
Sbjct: 854 LTERERQVARMASQGLSNKEVANRLQLSIRTVEGHLYQIFTKMGISSRSELEGSAQV 910


>UniRef50_B4D016 Two component transcriptional regulator, LuxR family n=6
           Tax=Verrucomicrobia RepID=B4D016_9BACT
          Length = 211

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 129 LSLNGVRQATDRLNNQWYI-NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
           LS +  RQ     + +  +  +S  LSP E E+L  ++ GY   +IA++L+  ++T+R H
Sbjct: 126 LSSHIARQVVQHFHEEGRLARESHHLSPREAEVLELLAAGYIYKEIADRLQIGLETVRTH 185

Query: 188 KFNVMSKLGVSS 199
             N+ +K+ V S
Sbjct: 186 VKNICAKMHVRS 197


>UniRef50_Q1LMP7 Two component transcriptional regulator, LuxR family n=1
           Tax=Cupriavidus metallidurans CH34 RepID=Q1LMP7_RALME
          Length = 191

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 33/56 (58%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           L+P ERE+L ++  G    Q+A +L    KTI+ H+ +VM KL V S   L+  AD
Sbjct: 126 LTPREREVLGWIVSGLRNKQVASELGTVEKTIKVHRAHVMQKLEVDSLPALVRIAD 181


>UniRef50_A6ARQ2 Transcriptional regulator, LuxR family protein n=3 Tax=Vibrio
           RepID=A6ARQ2_VIBHA
          Length = 211

 Score = 43.5 bits (101), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 34/62 (54%)

Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           Y++    L+  E EI + M +G S TQIA Q   +I TI+ H  NV+ KL V S   LL 
Sbjct: 146 YLSTKFLLTKRESEICKLMLQGLSNTQIARQSNVSINTIKTHASNVLHKLNVHSRYELLA 205

Query: 206 AA 207
            A
Sbjct: 206 MA 207


>UniRef50_A5LFV2 FimR protein n=3 Tax=Porphyromonas gingivalis RepID=A5LFV2_PORGI
          Length = 227

 Score = 43.1 bits (100), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 36/55 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+  E+E+++++  GYS  + AE++  + +T+  H+ N++ KLG S+ A L+  A
Sbjct: 164 LTQREKEVVQYLCDGYSAKETAEKMHLSYRTVETHRSNILHKLGFSNAAELIRYA 218


>UniRef50_B7UVM8 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7UVM8_PSEA8
          Length = 230

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 7/87 (8%)

Query: 112 GVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171
           GV++ A TL       F++ +G+   T       +   S   +  E +++  +  G S  
Sbjct: 120 GVIAHAKTLTSVAPRGFIATDGIGTFT-------FTPPSELFTSREWDVIYLLLSGLSEK 172

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           +IAEQ+ R++ T++ HK N+  K+G S
Sbjct: 173 EIAEQISRSLSTVKFHKSNIFQKVGCS 199


>UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia
           RepID=A4TJY3_YERPP
          Length = 210

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 41/62 (66%), Gaps = 3/62 (4%)

Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           +N++R LS  E  +LR++  G S  QIA+++  + KT+  +K  +++KLG+SS   ++E 
Sbjct: 144 VNRARLLSEREINVLRYLVNGLSNKQIADEMFISNKTVSTYKTRILTKLGLSS---VIEL 200

Query: 207 AD 208
           AD
Sbjct: 201 AD 202


>UniRef50_B8FQ55 Transcriptional regulator, LuxR family n=2 Tax=Desulfitobacterium
           hafniense RepID=B8FQ55_DESHD
          Length = 73

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           ++L+  E+++LR   +GYS  +IA+ L   I T+R H  ++  KLGVSS   L++
Sbjct: 12  QSLTYREKDVLRLRVKGYSSKKIADSLTIEITTVRTHLKHIHRKLGVSSQVELIQ 66


>UniRef50_C5AJ00 DNA-binding HTH domain-containing protein n=13 Tax=Proteobacteria
           RepID=C5AJ00_BURGB
          Length = 281

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 34/52 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           L+  E E++R    G+S   IAE+L  + +T+RAHK ++ +KLGVSS + L 
Sbjct: 222 LTAREVEVVRLGLSGFSTRAIAERLTISFETVRAHKKHIYAKLGVSSQSELF 273


>UniRef50_A3K876 Two-component response regulator n=2 Tax=Rhodobacteraceae
           RepID=A3K876_9RHOB
          Length = 213

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 7/98 (7%)

Query: 114 LSKASTLEIFHQELFLSLNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSR 166
           ++K+S  ++  + +F +L G       V +A  R +          LSP + EIL  ++R
Sbjct: 104 ITKSSDPKVLVEAIFGALRGQTVISPDVIEAIARDSISGIGTGLSDLSPRQTEILCLLAR 163

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           G+S  +IA +L  + KT+R + + + S LG+ +DA L+
Sbjct: 164 GWSAERIAGELSISQKTVRNNHYQIKSILGLETDAQLV 201


>UniRef50_B9Z3N9 Two component transcriptional regulator, LuxR family n=2
           Tax=Chromobacterium group RepID=B9Z3N9_9NEIS
          Length = 217

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 9/74 (12%)

Query: 140 RLNNQWYINQSRTL---------SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190
           RL+ Q + +++ TL         S  ERE+L  ++ G S  +IA  ++ + +T+ AH+ N
Sbjct: 126 RLSIQQHKHETETLEVMQRLSRISGREREVLEMVADGLSSKEIARAMELSPRTVEAHRAN 185

Query: 191 VMSKLGVSSDAGLL 204
           + SKLGV S A L+
Sbjct: 186 LFSKLGVDSLADLI 199


>UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS
          Length = 212

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+  ER++L+ +  GY+   I+E+L  +IKT+  H+ N+M KL V     LL  A
Sbjct: 150 LTLRERQVLKLIDEGYTNHGISEKLHISIKTVETHRMNMMRKLQVHKVTELLNCA 204


>UniRef50_C1M8K7 Predicted protein n=2 Tax=Citrobacter RepID=C1M8K7_9ENTR
          Length = 192

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 15/113 (13%)

Query: 99  ARLIGSLSPSPLDG--VLSKASTLEIFH-----QELFL----SLNGVRQATDRL---NNQ 144
           AR+I +++  P+    VL+  +T  +F        LFL    SL+ +  A  R+   NNQ
Sbjct: 64  ARIIRNMALRPVTKIIVLADEATFTLFQTVCGKNMLFLDQDASLDRLHHAVTRITKNNNQ 123

Query: 145 WYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196
             I      ++  E  ++  ++RG+S+TQIA   +++ KTI A+K N+  KLG
Sbjct: 124 QNIKALHNKITANEFNVMMMLARGWSLTQIAGASQKSEKTIGAYKSNIARKLG 176


>UniRef50_C5C4U8 Two component transcriptional regulator, LuxR family n=1
           Tax=Beutenbergia cavernae DSM 12333 RepID=C5C4U8_BEUC1
          Length = 216

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 11/165 (6%)

Query: 43  SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLI 102
           S  S +DA+      +V  +   +R  R +G+    E+    P TR L++   D++  L 
Sbjct: 37  SVPSGEDAVREALAVSVDVALLDIRMARMDGIEACAEIRRHRPDTRVLMLTTFDLDEYLF 96

Query: 103 GSLSPSPLDGVLSK--------ASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT-- 152
            S++     G L+K         +  E+      +S    R   DR+        +    
Sbjct: 97  RSVAAGA-SGFLTKDTPGADVAGAIREVHSGRSVVSPRATRALIDRIARAAPDAAAVAAD 155

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           LSP ER++L  ++RG+S  +IA +L     T++ H  ++  K+GV
Sbjct: 156 LSPRERDVLALLARGFSNAEIARELFVAESTVKTHVSSLTRKVGV 200


>UniRef50_Q21Y82 Two component transcriptional regulator, LuxR family n=1
           Tax=Rhodoferax ferrireducens T118 RepID=Q21Y82_RHOFD
          Length = 230

 Score = 43.1 bits (100), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 5/64 (7%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           TLSP E++I+  + +G S +QI  QL  + KT+  ++  +M+KLGV    GL     + L
Sbjct: 146 TLSPREQQIIIMVVKGASSSQIGTQLHLSPKTVATYRSRLMAKLGVRDVPGL-----VRL 200

Query: 212 CMRH 215
            +RH
Sbjct: 201 AVRH 204


>UniRef50_A4AJ82 Putative LuxR-family transcriptional regulator n=1 Tax=marine
           actinobacterium PHSC20C1 RepID=A4AJ82_9ACTN
          Length = 532

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
             S  LS  ER I R + RG S  QIAE L  ++ T+++H  N+  KLGV+S A
Sbjct: 461 QDSFALSDRERAIARELVRGSSSAQIAESLYISVNTVKSHLKNIYRKLGVTSRA 514


>UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT
          Length = 220

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P EREIL+ ++ G     + + L  ++KT   H+  +M+KLG+ S A L+  A
Sbjct: 158 LTPREREILQLLAEGRKNRDVGKALNISVKTAETHRARIMAKLGIDSVADLVRYA 212


>UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales
           RepID=Q485W6_COLP3
          Length = 215

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/67 (31%), Positives = 42/67 (62%)

Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           ++N    N+S  L+  E+ +L ++++G +  +IA+ L  + +T+ AH+ N+ +KLG+ S 
Sbjct: 141 IDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTVEAHRRNMKTKLGIHSL 200

Query: 201 AGLLEAA 207
           A L+  A
Sbjct: 201 AKLISYA 207


>UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem
           domain,LuxR C-term domain n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RBJ1_CUPTR
          Length = 223

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%)

Query: 155 PTERE--ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           PT+RE  ++R  ++G  +T+IA +L R++ T+ + K   M KLGV ++  L+  A
Sbjct: 163 PTQRELEVIRLFAQGAQLTEIAAKLGRSVSTVSSQKTVAMRKLGVQTNTALIRYA 217


>UniRef50_A8Y5U6 Putative response regulator n=1 Tax=Prosthecobacter vanneervenii
           RepID=A8Y5U6_9BACT
          Length = 169

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 13/107 (12%)

Query: 108 SPLDGVLSKASTLEIFHQELFLS-------LNGVRQATDRLNNQWYINQSRTLSPTEREI 160
           +P D V+  A+  ++   EL+LS       LN      D  +     +    LS  E EI
Sbjct: 59  APPDQVV--AAIRQVLRGELYLSAAANLLMLNSFVSGKDHGSK----SMVEKLSDRELEI 112

Query: 161 LRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
              + +G   + IA  L+ ++KT+ AH+ ++ +KLG+S+   L+ AA
Sbjct: 113 FELLGKGRGTSMIAHDLRLSVKTVEAHRSHIKAKLGISTAPELVRAA 159


>UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena
           ATCC 35185 RepID=C9LUT0_9FIRM
          Length = 216

 Score = 43.1 bits (100), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 15/170 (8%)

Query: 48  QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSP 107
           ++A+ + +   V  +   +      GL CL  L    P  R L++     E + +     
Sbjct: 43  EEALEKAAKTPVDIALLDLSMPHMGGLECLRRLKAMQPAVRVLILTMHS-ERQYVCECLR 101

Query: 108 SPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNN---QWYIN-------QSRTLSPTE 157
           +  +G L K    +    ELF +L  V      L     +  I+       +   LS  E
Sbjct: 102 AGANGYLCK----DTLDAELFRALRTVAAGGRYLGEREAELLIDGALEEPEEPAALSTRE 157

Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           RE+L  +  GYS++ IA++L  +IKT+  +K  ++ KL  + ++ L++ A
Sbjct: 158 REVLELIVHGYSLSTIADKLYLSIKTVSTYKTRLLQKLDCTQNSELVDYA 207


>UniRef50_B1ZI39 Two component transcriptional regulator, LuxR family n=5
           Tax=Methylobacterium RepID=B1ZI39_METPB
          Length = 222

 Score = 42.7 bits (99), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           TLS  ER+ILRF++ G++  ++A++L    K I   K    +KLG++S A +++ A IL 
Sbjct: 154 TLSERERDILRFVAFGFTSKEVADRLGATAKAIETQKARACTKLGLASRAQIVQFA-ILQ 212

Query: 212 CMRHCE 217
              H E
Sbjct: 213 GWLHGE 218


>UniRef50_Q89XB5 Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum
           RepID=Q89XB5_BRAJA
          Length = 207

 Score = 42.7 bits (99), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 37/61 (60%)

Query: 147 INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           ++  + L+  ERE+LR +S GYS  Q A +++ + +T  +H+   M KLG  + A L+ A
Sbjct: 141 LSGQKRLTKREREVLRLISEGYSNKQGALRMQISPRTFESHRAEAMRKLGARNTADLVRA 200

Query: 207 A 207
           A
Sbjct: 201 A 201


>UniRef50_D0LDI8 Regulatory protein LuxR n=1 Tax=Gordonia bronchialis DSM 43247
           RepID=D0LDI8_GORB4
          Length = 271

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 30/47 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           L+P+ER +L F+  GY+  QIA  L  ++ T++ H  ++  KL VS+
Sbjct: 211 LTPSERRVLDFLPSGYTADQIAGMLSVSVNTVKTHSRSIYRKLQVST 257


>UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP
          Length = 215

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P E++IL+ ++ G+S  +IA++   ++ T+  H+ N+M KL +   A L+  A
Sbjct: 153 LTPKEKQILQLIAEGFSSKEIAKEFGLSLNTVHVHRNNIMRKLDIHKQAELVRYA 207


>UniRef50_A9HE32 Putative transcriptional regulatory protein n=1
           Tax=Gluconacetobacter diazotrophicus PAl 5
           RepID=A9HE32_GLUDA
          Length = 220

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)

Query: 131 LNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           L+ V  A +    QW  +Q          TLS  ERE++  +  G    QIA +L  ++ 
Sbjct: 120 LSAVSDAVETWWRQWRQDQGAADARQRYATLSAREREVMALVVAGLMNKQIAARLSLSVV 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLL 204
            I+AH+  VM K+G  S A L+
Sbjct: 180 AIKAHRSGVMRKMGADSLADLV 201


>UniRef50_C0YJJ8 LuxR family transcriptional regulator n=1 Tax=Chryseobacterium
           gleum ATCC 35910 RepID=C0YJJ8_9FLAO
          Length = 245

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 31/47 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LSP E E+L+F+  GY+  +IA+ L  ++ T+  H+ N++ KL V +
Sbjct: 189 LSPRELEVLKFVGEGYASKEIADMLSISVNTVSRHRQNILEKLKVKN 235


>UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9
           Tax=Actinobacteria (class) RepID=D2Q428_9ACTO
          Length = 213

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 33/47 (70%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LS  ERE+LR ++RGY+  ++A +L  ++KT+  H  +V+ KL +S+
Sbjct: 153 LSQREREVLRLIARGYAYKEVARELFISVKTVETHVSSVLRKLQLSN 199


>UniRef50_B3E9L1 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter lovleyi SZ RepID=B3E9L1_GEOLS
          Length = 223

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LS  E EI R ++RGY + +IA  L  +IKT+  +K  + +K+G   +A L+  A
Sbjct: 163 LSRREMEIFRLLARGYMLKRIANDLGLSIKTVSTYKVRLSAKMGFKDNAALIRYA 217


>UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP
          Length = 235

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 63/172 (36%), Gaps = 40/172 (23%)

Query: 54  ISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLV---------------------I 92
           I  A V  S   M      GL  +  +  +FPR R LV                     +
Sbjct: 59  IDLAIVDLSMPGM-----NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYV 113

Query: 93  ADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT 152
             D   A L+ ++      G    AS  E     + L LNG   A               
Sbjct: 114 TKDGASAELVNAVRKVATGGAYVTASLAE----RVVLQLNGATTAPGHAQ---------- 159

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           LS  E E+LR +  G  +T IAE L  ++KT+  HK  +  KL + + A L+
Sbjct: 160 LSDRELEVLRRIVAGERITDIAEALHLSVKTVSTHKSRIQEKLQLPTMAALI 211


>UniRef50_B9Z8S5 Two component transcriptional regulator, LuxR family n=1
           Tax=Lutiella nitroferrum 2002 RepID=B9Z8S5_9NEIS
          Length = 208

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 18/193 (9%)

Query: 25  ESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKF 84
           +SL   F G  ++   + S E+F       +F A+I     +R     G+  L  LA + 
Sbjct: 17  DSLIWLFDGQGFQTTGFDSAEAFLAGPGPAAFNALIVD---LRLSGISGIVLLERLA-EH 72

Query: 85  PRTRRLVI--ADDDIEARLIGSLSPSPLDGV---LSKASTLEIFHQELFLSLNGVRQATD 139
           P    +++  A  D+    + +L    +D +         L +  Q L       +Q  D
Sbjct: 73  PYCPPVIMLTAHGDV-PHAVAALKLGAIDFMEKPFDDGRLLAMVDQALLRD----QQERD 127

Query: 140 RLNNQWYINQSRTL-SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           R      +NQS  L +  ERE+++ +  G    QIA++L  ++KT+  H+  V  K+GV 
Sbjct: 128 RFGRLSRLNQSLALLTEREREVMQLILAGKLNKQIADELAISMKTVEVHRSRVFDKMGVK 187

Query: 199 SD---AGLLEAAD 208
           S    AGL+   D
Sbjct: 188 SAVELAGLMAVLD 200


>UniRef50_B4WXQ1 Transcriptional regulator, LuxR family protein n=1 Tax=Alcanivorax
           sp. DG881 RepID=B4WXQ1_9GAMM
          Length = 848

 Score = 42.7 bits (99), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           F+  LF ++     A+D L     ++    L+P E EI   +  G S  QI+E    ++ 
Sbjct: 765 FYTGLFPAVFNATPASDPLE----VDPDSVLTPKENEIFELLQSGMSNAQISECTGVSVT 820

Query: 183 TIRAHKFNVMSKLGVSS 199
           T + H  N+ SKLGVS+
Sbjct: 821 TTKWHLKNIYSKLGVSN 837


>UniRef50_D2Q2Q4 Transcriptional regulator, LuxR family n=2 Tax=Kribbella flavida
           DSM 17836 RepID=D2Q2Q4_9ACTO
          Length = 924

 Score = 42.7 bits (99), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 34/54 (62%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
            +P E +I+R  + G +  +IA+Q+  + +T+ AH + V  KLG++S   L+EA
Sbjct: 861 FTPQELQIMRLAAAGLTNKEIADQIYLSHRTVAAHLYKVFPKLGITSRGQLVEA 914


>UniRef50_B3PDX5 Response regulator n=1 Tax=Cellvibrio japonicus Ueda107
           RepID=B3PDX5_CELJU
          Length = 225

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 46  SFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVI---ADDDIEARLI 102
           +  +A+ R+    V    + +      G+  +  L   +P    +VI   ADD+    ++
Sbjct: 49  TLSEALDRLHRQPVDLLMADLNLPDGHGIEAIQLLRRLYPEADAMVISALADDET---VL 105

Query: 103 GSLSPSPLDGVLSKASTLEIFH--QEL-----FLSLNGVRQATDRLNNQWYINQSRTLSP 155
           G++    +  +L  A +LE+    QEL      +S +  R    R+        +  L+P
Sbjct: 106 GAIEAGAVGYLLKDADSLELVEAIQELRAGRSPISSSIARILVRRMGGSTPATPTPELTP 165

Query: 156 TEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            E EILR +++G++ T++AE L  +  T+  H  N+  KL  ++
Sbjct: 166 RETEILRGIAKGFTYTELAEWLGISRHTVPVHIKNIYRKLAANN 209


>UniRef50_A1K8Y3 Two-component response regulator n=6 Tax=Proteobacteria
           RepID=A1K8Y3_AZOSB
          Length = 215

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           LSP ERE+ R +++G    ++A  L  + KT+  H+ +VM K GV+S A L
Sbjct: 152 LSPREREVARLVAQGLPNKRVARALGISEKTVHVHRQHVMEKAGVASAAEL 202


>UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT
          Length = 242

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 12/67 (17%)

Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
           ++ GV    D+L+++ +            E+LR + RG+   +IAE+L  ++KT+  H+ 
Sbjct: 162 TIAGVASPVDKLSDREF------------EVLRLLGRGFGSREIAEELSLSVKTVETHRA 209

Query: 190 NVMSKLG 196
           ++  KLG
Sbjct: 210 HIKEKLG 216


>UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM
          Length = 226

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           TL+  ERE+LR  + G S++ IA + +R++KTI   K +   KLG+ +D  L    D L
Sbjct: 167 TLTLREREVLRCFATGMSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVDKL 225


>UniRef50_D2RAB0 Transcriptional regulator, LuxR family n=2 Tax=Gardnerella
           vaginalis RepID=D2RAB0_GARVA
          Length = 217

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 29/51 (56%)

Query: 149 QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           ++  LSP E EI+R   +GYS  +IA+QL   + T+  H   +  KL V S
Sbjct: 152 KTSVLSPQESEIMRLCKQGYSSKEIADQLNVKVSTVNTHLRRIYGKLQVKS 202


>UniRef50_A6CG81 DNA-binding response regulator, LuxR family protein n=1
           Tax=Planctomyces maris DSM 8797 RepID=A6CG81_9PLAN
          Length = 222

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 40/72 (55%)

Query: 134 VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193
           ++   +R+ NQ  + +   L+  ERE++ ++  G+S  +IA  L  + KT+ AH+  +M 
Sbjct: 136 IKNKQNRIQNQDLMERKELLTRREREVMEYVVAGFSSREIAGTLNVSFKTVEAHRAKIMK 195

Query: 194 KLGVSSDAGLLE 205
           K+   S   L++
Sbjct: 196 KMQAKSVPKLIQ 207


>UniRef50_B4D4R4 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D4R4_9BACT
          Length = 195

 Score = 42.7 bits (99), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 6/136 (4%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           GL  L  L  +  R  R ++    ++ RLI     +   G + K+  L+IF + L     
Sbjct: 47  GLEVLRALRAEM-REVRCMVYSGTLDRRLIVEALQARPHGFVHKSDPLKIFCEALRAVTE 105

Query: 133 GVRQ----ATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
           G       AT  ++++ +++ + + L+  ER IL+ ++ G S  ++AE++    KT+  H
Sbjct: 106 GCSYFTPFATKLMDDERHLHTAASHLTDRERAILQMIAEGMSNKEMAERISIAPKTVEHH 165

Query: 188 KFNVMSKLGVSSDAGL 203
           +  VM KLG+   A L
Sbjct: 166 RAQVMQKLGMHDVATL 181


>UniRef50_A9BU27 Transcriptional regulator, LuxR family n=1 Tax=Delftia acidovorans
           SPH-1 RepID=A9BU27_DELAS
          Length = 163

 Score = 42.4 bits (98), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 47/77 (61%), Gaps = 6/77 (7%)

Query: 133 GVRQATDRLNN---QWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
           G+R A + + +   Q +++ +R+   LSP E+E+L  +  G++  +IA  L  +  T+R 
Sbjct: 73  GLRNAVELVTHARRQGWLSAARSPLPLSPREQEVLAHVLAGHTSKEIARSLYLSDLTVRK 132

Query: 187 HKFNVMSKLGVSSDAGL 203
           H+ N++ KLG++S A L
Sbjct: 133 HRENILRKLGLTSTAQL 149


>UniRef50_C5BZU7 Two component transcriptional regulator, LuxR family n=43
           Tax=Actinobacteridae RepID=C5BZU7_BEUC1
          Length = 232

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 9/77 (11%)

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           F  + F ++ G     D L+          L+  ERE++R ++RGY+  ++A +L  +IK
Sbjct: 151 FVLDAFGAIGGDVATGDELDK---------LTAREREVMRLIARGYTYREVASELFISIK 201

Query: 183 TIRAHKFNVMSKLGVSS 199
           T+  H   V+ KL +SS
Sbjct: 202 TVETHVSAVLRKLQLSS 218


>UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=52 Tax=Bacilli
           RepID=A4VZN8_STRS2
          Length = 213

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           L+  EREIL  +++GY   +IA++   ++KT++ H  N++SKL VS 
Sbjct: 148 LTAREREILTLLAKGYDNQRIADESFISLKTVKTHVSNILSKLAVSD 194


>UniRef50_UPI0001C31904 transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei
           DSM 14684 RepID=UPI0001C31904
          Length = 206

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 11/144 (7%)

Query: 60  IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
           + +F ++RS      + + +LA   P TR +V+A+    A     L+       LSK + 
Sbjct: 57  LLNFGSLRSP-----TEVRQLASAHPATRLIVLANRPTPAECNQMLAFG-ATACLSKETQ 110

Query: 120 LEIFHQELFLSLNGV----RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
                  + L+  G+    R AT+ L         + L+P E ++L  + RG S  +IA 
Sbjct: 111 ARDVLSAIHLASRGLHVLPRSATE-LAPPAQSPGPQLLTPREADVLAQLQRGRSNGEIAA 169

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSS 199
           +L   I+T+R H  N+  KLGV S
Sbjct: 170 ELHVGIETVRTHARNIYRKLGVGS 193


>UniRef50_Q1D626 DNA-binding response regulator, LuxR family n=2
           Tax=Cystobacterineae RepID=Q1D626_MYXXD
          Length = 223

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 136 QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195
           QA  +L N W       L+P E E+LR++++G S  ++   +    +T+R H  ++  K+
Sbjct: 150 QAEKKLENPW------ALTPLEFEVLRYVAKGLSNAEVGHVMTLERRTVRTHLSHIYRKM 203

Query: 196 GVSS 199
           GV+S
Sbjct: 204 GVNS 207


>UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B2JCS9_BURP8
          Length = 236

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 146 YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           Y+ Q   LS  E E+L   + G  +T+IA +L R++KTI A K   M KL + SDA L
Sbjct: 156 YVRQ--VLSRRELEVLTHYATGRGVTEIAMRLGRSVKTISAQKCTAMRKLSLQSDADL 211


>UniRef50_A7JTF8 Tetrathionate reductase regulon response regulator n=9
           Tax=Gammaproteobacteria RepID=A7JTF8_PASHA
          Length = 215

 Score = 42.4 bits (98), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 35/53 (66%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           L+  ER ++  + +G++  QIA++L  +++T+  H+ NVM K+   S AGL++
Sbjct: 135 LTEKERNLVPLIMQGFTNKQIADKLAISVRTVEVHRANVMEKMQAESLAGLVQ 187


>UniRef50_UPI0001C33E7F two component LuxR family transcriptional regulator n=1
           Tax=Enterobacter cancerogenus ATCC 35316
           RepID=UPI0001C33E7F
          Length = 192

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
           LS  E E++  +  GY++T+IA    R++ TI   K N M KL +SS + L++
Sbjct: 130 LSAREWEVIHLIVEGYTITEIASYRNRSVSTIATQKHNAMKKLNISSHSELIK 182


>UniRef50_C7PX21 Two component transcriptional regulator, LuxR family n=1
           Tax=Catenulispora acidiphila DSM 44928
           RepID=C7PX21_CATAD
          Length = 240

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           L+P ERE+L+ M  G +   IA+ L  +  T+R H  NV+ KLGV S
Sbjct: 176 LTPREREVLQCMVSGMTRASIAQHLFLSPNTVRTHMQNVLGKLGVHS 222


>UniRef50_A3VTU0 Two-component response regulator n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VTU0_9PROT
          Length = 200

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 134 VRQATD--RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191
           +R  TD   +   W   Q   L+P ERE+   ++ G +  ++A +L  + +TI  H+  V
Sbjct: 120 LRDGTDLAPMPEDW--PQLDALTPREREVALALNEGLTNKEVARRLGCSPRTIEVHRARV 177

Query: 192 MSKLGVSSDAGLL 204
             KLGVS+ AGL+
Sbjct: 178 FHKLGVSNIAGLV 190


>UniRef50_Q1IY93 Transcriptional regulator, LuxR family n=1 Tax=Deinococcus
           geothermalis DSM 11300 RepID=Q1IY93_DEIGD
          Length = 197

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 110 LDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169
           L G+L  A+ L +    L  SL       D       ++   TL+P ER++L  ++ G S
Sbjct: 94  LAGILGAAAGLAVLPPTLLPSL--FSAGEDEEEAALPLSGDVTLTPRERDVLALLAAGLS 151

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
             + A +L  +  T++ H   V SKLGV S A
Sbjct: 152 NKRAARELGVSESTVKFHVQAVYSKLGVQSRA 183


>UniRef50_C0Z8M0 Two-component response regulator n=1 Tax=Brevibacillus brevis NBRC
           100599 RepID=C0Z8M0_BREBN
          Length = 212

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%)

Query: 151 RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           + LSP ER+IL+ + +G++ TQI + L    +TI+ H   ++ K+GV +
Sbjct: 150 KLLSPAERDILQLIHQGHTQTQIEQSLHITKRTIKNHINRILKKMGVKT 198


>UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167
           Tax=Gammaproteobacteria RepID=UHPA_ECO57
          Length = 196

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 18/48 (37%), Positives = 33/48 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSD 200
           L+  ER++   +++G ++ +IA +L  + KT+  H+ N+M KLGVS+D
Sbjct: 138 LTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRANLMEKLGVSND 185


>UniRef50_UPI0000382D84 COG2909: ATP-dependent transcriptional regulator n=1
           Tax=Magnetospirillum magnetotacticum MS-1
           RepID=UPI0000382D84
          Length = 122

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 9/64 (14%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS---------DAGL 203
           LSP ER++LR +S G++  Q A +   ++ TIR     +  KLGVSS         +AG+
Sbjct: 21  LSPRERKVLRSLSEGFTAEQTAARFNVSVNTIRTQIRTLYRKLGVSSRREAVAVAQEAGI 80

Query: 204 LEAA 207
           L AA
Sbjct: 81  LAAA 84


>UniRef50_C6VU12 Transcriptional regulator, LuxR family n=1 Tax=Dyadobacter
           fermentans DSM 18053 RepID=C6VU12_DYAFD
          Length = 216

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           + QE+ L L     + D+   +   +    LS  E EILR ++  YS  +IA +L  + K
Sbjct: 128 YGQEVMLKL--AESSMDKYMQEPAPSTRDFLSKREIEILRLVASEYSTNKIASELCISDK 185

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  H+ N+  KLGV +  GL + A
Sbjct: 186 TVETHRRNLFQKLGVRNSVGLTKIA 210


>UniRef50_C2KQV5 Response regulator n=2 Tax=Mobiluncus mulieris RepID=C2KQV5_9ACTO
          Length = 220

 Score = 42.4 bits (98), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 37/71 (52%)

Query: 137 ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196
           A D    + Y+     LS  E +++R ++      QIA +L  ++ T++ H  ++M KLG
Sbjct: 143 AADAAEGEEYVKSHGILSERELQVVRLVAEALENKQIASELDISVATVKKHVQSIMDKLG 202

Query: 197 VSSDAGLLEAA 207
             + AG++  A
Sbjct: 203 TDNRAGIVAKA 213


>UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms
           RepID=Q0K0R3_RALEH
          Length = 216

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LSP E E++R  + G ++T+IA  L R++ TI   K + M KL ++++A L+  A
Sbjct: 156 LSPREIEVVRMFATGSTLTEIAGYLHRSLATIATQKRSAMRKLNITTNADLVTYA 210


>UniRef50_A4ABN5 Two-component system response regulator n=1 Tax=Congregibacter
           litoralis KT71 RepID=A4ABN5_9GAMM
          Length = 222

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 9/114 (7%)

Query: 103 GSLSPSPLDGVL--------SKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ-SRTL 153
           G  SPS L G+L        SK S       +L L L G R     L +     Q   TL
Sbjct: 100 GVTSPSVLAGILEAGADAIFSKLSPARDMLAKLPLILMGERYVAPELTDIIRKGQQGETL 159

Query: 154 SPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +  ER++L  +  G S  +IA++L  + KT+  H+ +VM KL V S A L+  A
Sbjct: 160 TGRERQVLNMIVMGKSNKEIAQELNISPKTVEKHRGSVMLKLEVHSVAQLMARA 213


>UniRef50_A9JPW9 PmrR protein n=1 Tax=Pseudomonas sp. RW10S2 RepID=A9JPW9_9PSED
          Length = 236

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 34/56 (60%)

Query: 141 LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196
           L++ W       LS  ERE+LR+ + G ++ ++A+ L  +I+T++ H  N  +KLG
Sbjct: 163 LSDSWQPQPQSPLSEREREVLRWAADGKTLNEVADILTLSIETVKFHTRNAGAKLG 218


>UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TQ52_9BACT
          Length = 214

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 38/55 (69%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P E+EIL  ++ G +  ++AE+L  +IKT+  H+ ++M+KL + + A L++ A
Sbjct: 150 LTPREKEILMLLAEGNTNREVAERLHLSIKTVGTHRQHIMNKLKLKNLADLVKYA 204


>UniRef50_D2U148 Two-component system, NarL family, invasion response regulator UvrY
           n=1 Tax=Arsenophonus nasoniae RepID=D2U148_9ENTR
          Length = 204

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 84/196 (42%), Gaps = 17/196 (8%)

Query: 22  IGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELA 81
           +G++S+F K  G     H  +  ++ Q    R   A +I      R+   E +  L  L 
Sbjct: 1   MGMQSIFDKTKGMKIAGHVVSLNQAIQ--WCRKHTAEIILLNG--RTSDYELIKKLQSLI 56

Query: 82  IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS-KASTLEIFHQELFLSLNGVRQATDR 140
              P    ++ + +     L+ +L      G+LS KA   ++ H    + L     + D 
Sbjct: 57  RMIPDIGIIMYSTEKKNIYLMKALEAGA-RGILSVKAKESDLLHAIRVVKLKQKYLSPDI 115

Query: 141 LNNQWYI---------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNV 191
              QW +         N    LS  E +I+  ++RG  + +IA+QL  N KTI ++++ +
Sbjct: 116 --AQWLVLHQLETEMSNPLNLLSDRELQIMLMVTRGVPVGEIAKQLNLNTKTINSYRYRM 173

Query: 192 MSKLGVSSDAGLLEAA 207
            SKL V SD  L   A
Sbjct: 174 FSKLKVRSDVELTHIA 189


>UniRef50_C0N928 Putative uncharacterized protein n=1 Tax=Methylophaga thiooxidans
           DMS010 RepID=C0N928_9GAMM
          Length = 215

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           N    LSP E+E+L  +S+GY+  +IA+ L  +  T+R +  NV  KL V
Sbjct: 150 NSPDVLSPREKEVLLLVSKGYTSKEIAKMLDLSYYTVREYVSNVYKKLSV 199


>UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=29
           Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD
          Length = 261

 Score = 42.4 bits (98), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+  EREILRF++RG S  +IA+ L  +  T++ H   +M KL     A L+ AA
Sbjct: 197 LTDREREILRFVARGMSNEEIADDLVISPATVKTHLARIMGKLDAHDRAQLVVAA 251


>UniRef50_C2KAW8 Response regulator n=1 Tax=Chryseobacterium gleum ATCC 35910
           RepID=C2KAW8_9FLAO
          Length = 212

 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 9/172 (5%)

Query: 43  SQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLV--IADDDIEAR 100
           S  +  D +    F  VI   +   S+    LS ++EL    P  + LV  + D+DI  +
Sbjct: 36  SYTNLTDQLHAEQFDLVILDINMPESKY---LSMISELKKIQPDLKILVFSVYDNDIAIQ 92

Query: 101 LIGSLSPSPLDGVLSKASTLE----IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPT 156
            I   +   ++ +  + + LE    IF    + S + V++       +   N   +LS  
Sbjct: 93  YIIEGADGYINKLCDENNILEAVGSIFETGTYYSPDIVKKLVSSAKKEAPANPLESLSER 152

Query: 157 EREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           E+EI   + +GY   +I+ +L  ++ T+  +K  +  KL + +   L+   D
Sbjct: 153 EKEIFDLLIQGYGNIEISNELNLHLSTVSTYKTRIYKKLNIKNTVDLVRLGD 204


>UniRef50_C0BE05 Putative uncharacterized protein n=1 Tax=Coprococcus comes ATCC
           27758 RepID=C0BE05_9FIRM
          Length = 533

 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 31/47 (65%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
           TL+P+ER +L++   GY++ +IA  L  +I T R H  N+  KLG++
Sbjct: 460 TLTPSERMVLQYYVDGYTIQEIASLLYISIGTARKHNTNMNRKLGIT 506


>UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4
           Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM
          Length = 223

 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 35/55 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P E+++LR ++ G S  QIA  ++ + KT+  H+ N+M KL V S   L++ A
Sbjct: 157 LTPREQQVLRLVAEGSSTRQIAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYA 211


>UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1
           Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3
          Length = 215

 Score = 42.0 bits (97), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 37/58 (63%)

Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + TL+  E E+L+ +S G S   IA++L  +++T+  H+ N+M KL V + A L++ A
Sbjct: 152 AETLTKRELEVLKEVSMGLSTKLIADKLFISVRTVETHRINLMKKLDVHNSAELIKKA 209


>UniRef50_C5CJZ9 Two component transcriptional regulator, LuxR family n=1
           Tax=Variovorax paradoxus S110 RepID=C5CJZ9_VARPS
          Length = 224

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LSP E ++LR +++G+S  QIAE +  ++ TI  H  N+  KL V S
Sbjct: 163 LSPRELKVLRLIAQGWSNQQIAEAVSLSVNTIEFHAKNIYRKLSVKS 209


>UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5
           Tax=Desulfovibrio RepID=A1VB77_DESVV
          Length = 216

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 11/105 (10%)

Query: 111 DGVLSKASTLEIFHQELFLSLNGVR----QATDRLNNQWYINQSRT-------LSPTERE 159
           DG L K ++ +I  Q +   L G R    + +D L + +  +  R        LS  E++
Sbjct: 100 DGYLLKNASRDILFQAMQTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQ 159

Query: 160 ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           +L+ ++ G+    +AE+L  + KT+  HK N+  KLG +S A L+
Sbjct: 160 VLKLVAEGHGNKAVAEKLCISHKTVEKHKANLKRKLGTASTAELV 204


>UniRef50_Q1LDC8 Two component transcriptional regulator, LuxR family n=1
           Tax=Cupriavidus metallidurans CH34 RepID=Q1LDC8_RALME
          Length = 237

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 29/47 (61%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LS  E EIL  ++RGY+  +IA  L  ++ T+ AH  N+  KL V+S
Sbjct: 174 LSARESEILDLVARGYTYAEIARHLSISVNTVAAHIRNIYGKLAVNS 220


>UniRef50_A1SPZ4 Regulatory protein, LuxR n=1 Tax=Nocardioides sp. JS614
           RepID=A1SPZ4_NOCSJ
          Length = 1006

 Score = 42.0 bits (97), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 100 RLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTERE 159
           R  G L+     G L++AS  ++  + L   L  +  A  R  +         L+P E E
Sbjct: 897 RATGDLAGGRELGDLARASAHQLGARPLLDELRSIGSAPARTESV-----PDALTPRESE 951

Query: 160 ILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +L+ +++G S  +IA+QL  + KT+  H  N++ KL  S   G  EAA I
Sbjct: 952 VLQLVAQGRSNGEIAKQLFISAKTVSVHVSNILGKLDAS---GRTEAAAI 998


>UniRef50_D0FXM2 LuxR family transcriptional regulator n=3 Tax=Erwinia
           RepID=D0FXM2_ERWPY
          Length = 207

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)

Query: 150 SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGL 203
           S  L+  E EILR+++RG S   +A  L  + KT+ AHK N+MSKL +   A L
Sbjct: 138 SNNLTRRETEILRYLARGISNGGVARFLNISEKTVSAHKRNIMSKLNMVRPAEL 191


>UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia
           RepID=C4KLT2_BURPS
          Length = 221

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P E E++R  + G S+T IA  L R++ T+   K + M KL V ++  L+  A
Sbjct: 161 LTPKELEVVRLFTGGMSLTDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCA 215


>UniRef50_Q2SEA9 ATP-dependent transcriptional regulator n=1 Tax=Hahella chejuensis
           KCTC 2396 RepID=Q2SEA9_HAHCH
          Length = 907

 Score = 42.0 bits (97), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 21/48 (43%), Positives = 30/48 (62%)

Query: 152 TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
            L+P E E+LR +  G S  +IAE+L     T+R+H  +V  KLG+SS
Sbjct: 837 ALTPKEWEVLRLIGEGSSNERIAERLYVAPSTVRSHIKHVYQKLGISS 884


>UniRef50_B4SLZ0 Two component transcriptional regulator, LuxR family n=18
           Tax=cellular organisms RepID=B4SLZ0_STRM5
          Length = 217

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 32/47 (68%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           LSP E E+LR ++ G S  +I E+++ + +T++AH  ++M KLGV  
Sbjct: 149 LSPRETEVLRHVAGGLSNKRIGERMQISEQTVKAHMKSLMDKLGVGD 195


>UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2
           Tax=Geobacter RepID=C6E2Z1_GEOSM
          Length = 216

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 33/55 (60%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L+P ERE+L+ ++ G +    A QL  N+KT+  H+  +M KL + S A L + A
Sbjct: 152 LTPREREVLQLIAEGNNAKNAAYQLNINVKTVDTHRQQIMKKLKMRSVAELTKYA 206


>UniRef50_C7BU28 Two component transcriptional regulator, luxr family n=1
           Tax=Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949 RepID=C7BU28_PHOAA
          Length = 209

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 9/111 (8%)

Query: 107 PSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSR 166
           P   D ++   S    FHQ++F       Q  ++L  ++       LS  E E+++ +  
Sbjct: 108 PIDADLLIETVSNALSFHQKIFKQ----HQVYEQLKVKF-----SQLSDRESEVMKIILE 158

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           G +  QIA+QL  + +TI  H+ N+  KL + S   L++  ++L  +  C+
Sbjct: 159 GKTSKQIAQQLALSPRTIEVHRANIFHKLDIHSLPQLVKEYELLKSLSFCD 209


>UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus
           sp. BH72 RepID=A1K960_AZOSB
          Length = 209

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 32/49 (65%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           LSP E  +L  +S+G  +T+I EQ   ++KTI  ++  ++ KL ++S+A
Sbjct: 149 LSPREMAVLLLLSKGVPLTRIGEQFHLSVKTISTYRARILEKLDLASNA 197


>UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2
           Tax=Flexibacteraceae RepID=C6W5G0_DYAFD
          Length = 219

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 16/175 (9%)

Query: 48  QDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIA------------DD 95
           Q+ + R+        F  ++    +G+        +FP  + +V++            + 
Sbjct: 39  QELLDRLPANTPDIVFMDLQMPVMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEK 98

Query: 96  DIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ--WYINQSRT- 152
            ++  L+   SP  ++  + +    E F+   F+S    R+  +R  N+  ++ N     
Sbjct: 99  GVQGYLLKDTSPDEVEKAIRRVHE-EGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVA 157

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LS  E+E+L+ +  G S T+I ++L  +++T+  H+  V+ K G  S A  +  A
Sbjct: 158 LSSREKEVLQLICDGLSTTEIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFA 212


>UniRef50_B8EBA2 Two component transcriptional regulator, LuxR family n=9
           Tax=Shewanella RepID=B8EBA2_SHEB2
          Length = 206

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)

Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           +NQ Y+   + L+P EREIL  +++G    +IA+ L   ++T+  H+ N+M  + V S A
Sbjct: 129 DNQ-YLETYQALTPREREILNLIAQGLKNQEIADSLCIAMRTVEIHRANLMKGMQVGSLA 187

Query: 202 GLL 204
            ++
Sbjct: 188 EMM 190


>UniRef50_C4UB72 Two-component response regulator n=1 Tax=Yersinia aldovae ATCC
           35236 RepID=C4UB72_YERAL
          Length = 187

 Score = 42.0 bits (97), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 9/97 (9%)

Query: 109 PLDG-VLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRG 167
           P+D  VL +  ++ +   E  L+ +  R++  +L NQ        LS  ERE+   + +G
Sbjct: 91  PIDADVLIETVSMALEQHEQSLTAHKQRESYQQLFNQ--------LSAREREVATLIIQG 142

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
            +  QIA  L  + +T+ AH+ N+ +KL V+S A L+
Sbjct: 143 ETSKQIAHTLSLSPRTVEAHRANIFAKLEVNSLASLI 179


>UniRef50_UPI0001BC30E6 two-component system, NarL family, response regulator DegU n=1
           Tax=Butyrivibrio crossotus DSM 2876 RepID=UPI0001BC30E6
          Length = 218

 Score = 42.0 bits (97), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 10/119 (8%)

Query: 90  LVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQ 149
           ++I+D+D  A+ +  +     DG +SK   +EI  + ++    G +     L     IN 
Sbjct: 80  IIISDND-NAKKMSYVIREGCDGFISKDCDVEILKRAVYSVYEGKKYIQPELEKFLNINV 138

Query: 150 SRTLSPTER---------EILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSS 199
           ++   P ER         E+L  +S+GY    I+ +LK   +T++ H  ++  K+ V+ 
Sbjct: 139 TQEDDPEERIKNLTKREIEVLLLISKGYVNKDISNELKITERTVKNHVSSIFRKINVND 197


>UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14
           Tax=Lactobacillus RepID=A5VJY7_LACRD
          Length = 217

 Score = 42.0 bits (97), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           LS  E+EIL  +  GY+  +IA ++  + KT+ AHK  +M KL ++S A LL  A
Sbjct: 155 LSKREQEILPLIVLGYTNKEIATKMFISPKTVEAHKTKIMQKLNLASHAELLHYA 209


>UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7
           Tax=cellular organisms RepID=A1VT42_POLNA
          Length = 224

 Score = 42.0 bits (97), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLE-AADILL 211
           L+P E   L +++ GYS  QIA +L  +++T+  H+ N+  KL ++  A L++ A D +L
Sbjct: 153 LTPKESATLAWLACGYSNKQIARELSMSVRTVETHRLNLRRKLRITGQAELVKYAIDHML 212

Query: 212 CMRHCETS 219
            ++  + +
Sbjct: 213 PLKKLQAT 220


>UniRef50_A0M543 Two-component system response regulator n=3 Tax=Flavobacteria
           RepID=A0M543_GRAFK
          Length = 212

 Score = 41.6 bits (96), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 10/147 (6%)

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF-LSL 131
           G++ +  +  +FP  + L+ +    E   + ++      G +SK +  E   + ++ ++ 
Sbjct: 62  GINAIRRIKQEFPEVKTLIFSSHPEEMYALSAIKAGAA-GYISKHTDNETLEKAIYQVAR 120

Query: 132 NGV---RQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            G+   R  T++LN+     +  I + + LS  E E+L  +S G     IAE L  N KT
Sbjct: 121 GGIYLNRSITEKLNSGISRGKSLITKFKKLSTRETEVLNLLSSGKRNKDIAEALDINEKT 180

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADIL 210
           +  +K  ++ KL V + A L+  + +L
Sbjct: 181 VSTYKTRLLKKLKVDNVADLITQSRLL 207


>UniRef50_A6T252 DNA-binding response regulator, LuxR family n=1
           Tax=Janthinobacterium sp. Marseille RepID=A6T252_JANMA
          Length = 248

 Score = 41.6 bits (96), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 35/48 (72%)

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKL 195
           ++ + ++P E++IL+ ++ G S  +IA+ L+ ++ T+R HK N+M+KL
Sbjct: 183 SEDQAVTPREQQILKLVAAGKSSQEIADTLELSVFTVRKHKQNLMAKL 230


>UniRef50_D1ACQ9 Transcriptional regulator, LuxR family n=1 Tax=Thermomonospora
           curvata DSM 43183 RepID=D1ACQ9_THECD
          Length = 886

 Score = 41.6 bits (96), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           L+P EREI R ++RG S   IA++L  +  T+  H  N+++KLG  S A
Sbjct: 812 LTPREREIARLIARGLSNRGIADELVISPATVARHVANILAKLGFGSRA 860


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=...   231   1e-59
UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Ente...   189   8e-47
UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=C...   181   1e-44
UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Kl...   181   2e-44
UniRef50_A4CN07 Response regulator containing a CheY-like receiv...   164   2e-39
UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece...   162   1e-38
UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudoma...   160   4e-38
UniRef50_Q04UI4 Receiver component of a two-component response r...   159   8e-38
UniRef50_C7MN84 Response regulator containing a CheY-like receiv...   159   1e-37
UniRef50_B8E485 Two component transcriptional regulator, LuxR fa...   158   1e-37
UniRef50_C6C961 Two component transcriptional regulator, LuxR fa...   154   2e-36
UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa...   153   5e-36
UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR fa...   152   9e-36
UniRef50_A9BU04 Two component transcriptional regulator, LuxR fa...   152   1e-35
UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut...   151   2e-35
UniRef50_B8L629 Regulatory protein, LuxR:Response regulator rece...   150   3e-35
UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR fa...   150   3e-35
UniRef50_P69409 Capsular synthesis regulator component B n=164 T...   150   4e-35
UniRef50_B1K7T2 Two component transcriptional regulator, LuxR fa...   149   6e-35
UniRef50_B8L628 Regulatory protein, LuxR:Response regulator rece...   149   7e-35
UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl...   148   1e-34
UniRef50_B4SSH8 Two component transcriptional regulator, LuxR fa...   147   2e-34
UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa...   147   2e-34
UniRef50_B1K3F3 Two component transcriptional regulator, LuxR fa...   147   3e-34
UniRef50_B1K7T3 Two component transcriptional regulator, LuxR fa...   147   4e-34
UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa...   146   5e-34
UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa...   146   5e-34
UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa...   146   6e-34
UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa...   145   7e-34
UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci...   145   8e-34
UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=...   143   3e-33
UniRef50_Q13FW8 Two component transcriptional regulator, LuxR fa...   143   3e-33
UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib...   143   3e-33
UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10...   143   5e-33
UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa...   143   6e-33
UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1 ...   142   9e-33
UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=...   142   1e-32
UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa...   142   1e-32
UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla...   141   2e-32
UniRef50_A9BWP2 Two component transcriptional regulator, LuxR fa...   141   2e-32
UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa...   141   2e-32
UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 ...   140   2e-32
UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa...   140   2e-32
UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator rece...   140   4e-32
UniRef50_C4XNR8 NarL family two-component response regulator n=1...   139   5e-32
UniRef50_D2QQM0 Two component transcriptional regulator, LuxR fa...   138   1e-31
UniRef50_UPI000197BDC0 two component LuxR family transcriptional...   138   1e-31
UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwin...   137   4e-31
UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr...   135   1e-30
UniRef50_B1K3F1 Two component transcriptional regulator, LuxR fa...   134   2e-30
UniRef50_C1A5E6 NarL family two-component response regulator n=1...   133   4e-30
UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI...   133   5e-30
UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia ...   133   6e-30
UniRef50_A5FAW2 Two component transcriptional regulator, LuxR fa...   132   7e-30
UniRef50_C3K5C3 Putative response regulator, receiver domain n=1...   132   1e-29
UniRef50_B2JCS8 Two component transcriptional regulator, LuxR fa...   131   2e-29
UniRef50_A9IRH9 Probable two-component response regulator n=5 Ta...   131   2e-29
UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=...   130   3e-29
UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa...   129   5e-29
UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot...   129   6e-29
UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa...   128   1e-28
UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 ...   128   1e-28
UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=...   127   3e-28
UniRef50_B8LB61 Two component transcriptional regulator, LuxR fa...   127   3e-28
UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ...   126   5e-28
UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=...   126   7e-28
UniRef50_B1K3E7 Two component transcriptional regulator, LuxR fa...   125   8e-28
UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfo...   125   1e-27
UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_A0NVX8 Two component transcriptional regulator, LuxR fa...   123   4e-27
UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa...   123   5e-27
UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobi...   123   6e-27
UniRef50_Q7NWW0 Probable two-component response regulator, LuxR ...   122   6e-27
UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 ...   122   1e-26
UniRef50_B1T388 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_C6P0R1 Two component transcriptional regulator, LuxR fa...   120   3e-26
UniRef50_B0TSG4 Two component transcriptional regulator, LuxR fa...   120   4e-26
UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseud...   119   6e-26

Sequences not found previously or not previously below threshold:

UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR fa...   141   2e-32
UniRef50_Q2L102 Putative two-component response regulator of cap...   140   3e-32
UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12...   140   4e-32
UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa...   138   9e-32
UniRef50_A6V170 Probable two-component response regulator n=1 Ta...   138   1e-31
UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas...   138   1e-31
UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa...   137   2e-31
UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa...   137   2e-31
UniRef50_B8G137 Two component transcriptional regulator, LuxR fa...   137   3e-31
UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa...   137   3e-31
UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele...   137   3e-31
UniRef50_B2U714 Two component transcriptional regulator, LuxR fa...   137   4e-31
UniRef50_B2UFA9 Two component transcriptional regulator, LuxR fa...   137   4e-31
UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR fa...   136   4e-31
UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa...   136   6e-31
UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa...   136   7e-31
UniRef50_B6VKY7 Pvp response regulator (Two-component response r...   136   7e-31
UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa...   135   8e-31
UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa...   135   9e-31
UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ...   135   1e-30
UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba...   135   1e-30
UniRef50_A9BWP0 Two component transcriptional regulator, LuxR fa...   135   1e-30
UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa...   135   1e-30
UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni...   134   2e-30
UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa...   134   3e-30
UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa...   133   3e-30
UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ...   133   4e-30
UniRef50_Q1LG72 Two component transcriptional regulator, LuxR fa...   133   4e-30
UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa...   133   5e-30
UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa...   132   7e-30
UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium...   132   8e-30
UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92...   132   9e-30
UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa...   132   9e-30
UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding...   132   1e-29
UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC...   131   1e-29
UniRef50_C1A9U5 NarL family two-component response regulator n=1...   131   2e-29
UniRef50_A9AIC6 Two component transcriptional regulator, LuxR fa...   131   2e-29
UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa...   131   2e-29
UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algorip...   131   2e-29
UniRef50_A5G586 Two component transcriptional regulator, LuxR fa...   131   2e-29
UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa...   130   2e-29
UniRef50_Q04VJ6 Receiver component of a two-component response r...   130   3e-29
UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece...   130   3e-29
UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi...   130   3e-29
UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ...   130   4e-29
UniRef50_B4STE5 Two component transcriptional regulator, LuxR fa...   130   4e-29
UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa...   130   4e-29
UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa...   129   8e-29
UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit...   128   9e-29
UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1...   128   1e-28
UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa...   128   2e-28
UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit...   128   2e-28
UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa...   128   2e-28
UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti...   127   2e-28
UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa...   127   2e-28
UniRef50_B2JCS9 Two component transcriptional regulator, LuxR fa...   127   2e-28
UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon...   127   2e-28
UniRef50_UPI0001C314AF two component transcriptional regulator, ...   127   2e-28
UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa...   127   2e-28
UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ...   127   3e-28
UniRef50_C4ZM15 Two component transcriptional regulator, LuxR fa...   127   3e-28
UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta...   127   3e-28
UniRef50_A1BJU3 Two component transcriptional regulator, LuxR fa...   127   3e-28
UniRef50_Q3BU15 Two-component system response regulator, LuxR fa...   127   3e-28
UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa...   127   4e-28
UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa...   127   4e-28
UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular...   127   4e-28
UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa...   126   4e-28
UniRef50_C4XMF2 NarL family two-component response regulator n=1...   126   4e-28
UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa...   126   4e-28
UniRef50_UPI00017452CB response regulator with a HTH DNA-binding...   126   5e-28
UniRef50_B3RBJ1 Putative transcriptional regulator, signal recei...   126   5e-28
UniRef50_A5VJY7 Two component transcriptional regulator, LuxR fa...   126   5e-28
UniRef50_A4W740 Two component transcriptional regulator, LuxR fa...   126   6e-28
UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=...   126   6e-28
UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa...   126   6e-28
UniRef50_B3E9L1 Two component transcriptional regulator, LuxR fa...   126   6e-28
UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa...   126   6e-28
UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa...   126   6e-28
UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa...   126   7e-28
UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora...   126   7e-28
UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa...   125   9e-28
UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ...   125   9e-28
UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_C5A924 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstoni...   125   1e-27
UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa...   125   1e-27
UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC...   125   1e-27
UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re...   125   2e-27
UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR fa...   125   2e-27
UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_B3E9K5 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa...   124   2e-27
UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa...   124   3e-27
UniRef50_D2Q428 Two component transcriptional regulator, LuxR fa...   124   3e-27
UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto...   124   3e-27
UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T...   123   3e-27
UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ...   123   3e-27
UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M...   123   4e-27
UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=...   123   4e-27
UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa...   123   4e-27
UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro...   123   4e-27
UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa...   123   4e-27
UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 ...   123   4e-27
UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa...   123   4e-27
UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa...   123   4e-27
UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa...   123   5e-27
UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR fa...   123   5e-27
UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa...   123   5e-27
UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulat...   123   6e-27
UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa...   123   6e-27
UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25...   123   6e-27
UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa...   123   6e-27
UniRef50_B4CYR7 Two component transcriptional regulator, LuxR fa...   123   6e-27
UniRef50_B3RA82 Response regulator protein; Response regulator r...   123   6e-27
UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa...   123   6e-27
UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc...   122   7e-27
UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa...   122   7e-27
UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob...   122   7e-27
UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa...   122   7e-27
UniRef50_C1TQ52 Response regulator containing a CheY-like receiv...   122   8e-27
UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR fa...   122   8e-27
UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter h...   122   8e-27
UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersin...   122   8e-27
UniRef50_A4VZN8 Response regulator containing a CheY-like receiv...   122   9e-27
UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator rece...   122   9e-27
UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa...   122   9e-27
UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR fa...   122   1e-26
UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa...   122   1e-26
UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa...   122   1e-26
UniRef50_B2JLH9 Two component transcriptional regulator, LuxR fa...   122   1e-26
UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa...   122   1e-26
UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=...   121   1e-26
UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algorip...   121   2e-26
UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa...   121   2e-26
UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=...   121   2e-26
UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T...   120   2e-26
UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa...   120   3e-26
UniRef50_C7PDL7 Two component transcriptional regulator, LuxR fa...   120   3e-26
UniRef50_D0MHE1 Two component transcriptional regulator, LuxR fa...   120   3e-26
UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=...   120   3e-26
UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS   120   3e-26
UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=...   120   3e-26
UniRef50_Q46SR4 Two component transcriptional regulator, LuxR fa...   120   3e-26
UniRef50_C1SMK1 Response regulator containing a CheY-like receiv...   120   3e-26
UniRef50_A1K960 Probable transcriptional regulator, LuxR family ...   120   4e-26
UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa...   120   4e-26
UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR fa...   120   4e-26
UniRef50_C7PJC5 Two component transcriptional regulator, LuxR fa...   120   5e-26
UniRef50_B1ZN14 Two component transcriptional regulator, LuxR fa...   120   5e-26
UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip...   120   5e-26
UniRef50_B9XH34 Two component transcriptional regulator, LuxR fa...   120   5e-26
UniRef50_P31802 Nitrate/nitrite response regulator protein narP ...   119   5e-26
UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax...   119   6e-26
UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax...   119   6e-26
UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR fa...   119   6e-26
UniRef50_C6XUH9 Response regulator receiver n=2 Tax=Pedobacter R...   119   6e-26
UniRef50_C1TL94 Response regulator containing a CheY-like receiv...   119   6e-26
UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa...   119   6e-26
UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa...   119   7e-26
UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa...   119   7e-26

>UniRef50_P39404 Transcriptional activator protein bglJ n=99 Tax=cellular organisms
           RepID=BGLJ_ECOLI
          Length = 175

 Score =  231 bits (589), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 175/175 (100%), Positives = 175/175 (100%)

Query: 51  MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 110
           MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL
Sbjct: 1   MSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPL 60

Query: 111 DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170
           DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM
Sbjct: 61  DGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 120

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 225
           TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY
Sbjct: 121 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY 175


>UniRef50_A4W681 Response regulator receiver protein n=2 Tax=Enterobacter
           RepID=A4W681_ENT38
          Length = 211

 Score =  189 bits (479), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 95/192 (49%), Positives = 131/192 (68%)

Query: 19  MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78
           MS+IG+E  F   +  PY+LH + + +SF  A++ I F +VI+S S  R ERR  L+ + 
Sbjct: 1   MSAIGLEHFFTTVSFRPYQLHLFKNFDSFNTALTYIPFFSVIYSLSDAREERRNCLAYMR 60

Query: 79  ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138
           ELA K    +R+++A D++EARLIG LSPS L G++SK+S+L    ++L   L+   Q  
Sbjct: 61  ELAFKHGAIQRIILASDEVEARLIGQLSPSRLHGIISKSSSLVDLRRQLITLLSETGQVN 120

Query: 139 DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVS 198
                 W+   +R LSPTER +LR+MS G S+ +IAEQL+RNIKTIRAHK+N M KLGV+
Sbjct: 121 SNAFTHWHGCHTRMLSPTERTVLRYMSSGLSIPEIAEQLERNIKTIRAHKYNAMLKLGVN 180

Query: 199 SDAGLLEAADIL 210
           SD GLL+AADIL
Sbjct: 181 SDVGLLDAADIL 192


>UniRef50_C9XUX9 Transcriptional activator protein bglJ n=2 Tax=Cronobacter
           RepID=C9XUX9_CROTZ
          Length = 200

 Score =  181 bits (460), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 88/194 (45%), Positives = 128/194 (65%), Gaps = 1/194 (0%)

Query: 19  MSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLT 78
           MS  G+ SL +       +L  ++   +F  A++   F+ VIFS    R  RR+ L  ++
Sbjct: 1   MSGEGVRSLLQVNNSTSCRLEIFSDHHAFIQALTYRHFSTVIFSLEGTREHRRDCLQFVS 60

Query: 79  ELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQAT 138
           E+A  +PR +R+V+ ++  EA+LI  LSP+PL G++ K+ TL  F  EL  +++   + +
Sbjct: 61  EMAKAWPRMKRIVMVNNVNEAKLISQLSPTPLQGIIDKSETLSRFTDELMSAMSDSARVS 120

Query: 139 DRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGV 197
           +  +  WY +Q SR LSPTER ILR+++ GYS++QIA +L+RNIKTIRAHKFN M KLGV
Sbjct: 121 ESPHKIWYASQGSRLLSPTERIILRYLTDGYSVSQIACRLERNIKTIRAHKFNAMLKLGV 180

Query: 198 SSDAGLLEAADILL 211
            +DAGLL AADILL
Sbjct: 181 HTDAGLLNAADILL 194


>UniRef50_C4X2X4 2-component transcriptional regulator n=6 Tax=Klebsiella
           RepID=C4X2X4_KLEPN
          Length = 224

 Score =  181 bits (459), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/217 (40%), Positives = 125/217 (57%), Gaps = 11/217 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           R+VA++EKCVM+ +    +F +     Y +H + +    + A     ++ +IFS S  RS
Sbjct: 8   RHVAIVEKCVMTEMAWRYIFSREDNRRYHIHLFKNVSMLRAAEIPFPWSTIIFSLSGSRS 67

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            R E L  + E+A   P  + +++A+++ E  LIG L P+ L G+L+K++      + L 
Sbjct: 68  SRAESLLFVHEMARCRPEVQTIILANNESEMHLIGHLMPACLHGILNKSAPRRGLQECLL 127

Query: 129 L-----SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
                  L+G  Q  DR         +  LSPTE  ILR+MS GYS++ IA QL RNIKT
Sbjct: 128 QLLDNHHLSGSEQFCDREA------CNDPLSPTEHAILRYMSWGYSLSDIAIQLNRNIKT 181

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
           IRAHKFN M+KLGV SD GLL AADILL +    T++
Sbjct: 182 IRAHKFNAMTKLGVRSDIGLLNAADILLHLPLNSTTS 218


>UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CN07_9FLAO
          Length = 217

 Score =  164 bits (416), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 56/217 (25%), Positives = 95/217 (43%), Gaps = 12/217 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +AL++   +   GI S+  +  G   ++H    Q      + + + A V+   + +R   
Sbjct: 4   IALVDDHRLFLEGIRSILDREIG--LEVHASVGQGVELLNLLKTTRADVV--LTDIRMPG 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GLS   ++   FP TR + +   D E  +   L  +   G L K    E   Q +   
Sbjct: 60  MDGLSLTRQICRSFPNTRVIALTMLDHEQDV-KDLLDAGARGYLVKNVEKEELVQAIHTV 118

Query: 131 LNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             G        R       +Q    +S  L+  ER++L  +++G +  QIAE LK +  T
Sbjct: 119 ARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSRFT 178

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
           I  H+ N+  K+G+ S+ GLL+AA   L     +T N
Sbjct: 179 IDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215


>UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ
          Length = 214

 Score =  162 bits (409), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 10/205 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+        G            +  + +  +    ++  FS      
Sbjct: 5   VIVADDHPLIIFGVRQALASAPGIRVVADAPD-PGALTELLRNVPCDVLVTDFSMPCGAT 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL+ LT L  +FP  R +V+   +  A L+ S+    + G+++K   L      +  +
Sbjct: 64  PDGLAMLTSLRQRFPHVRVVVLTMLE-NAGLMVSMQDVGVLGIVNKRDDLSELPAVIAAA 122

Query: 131 LNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
               R  +  ++             + +R LSP E E++R    G S +++A  L R+I 
Sbjct: 123 FRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRSIN 182

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           TI   K N M KLGVS+DA L + A
Sbjct: 183 TISTQKTNAMRKLGVSNDAELFDYA 207


>UniRef50_C4KWB3 DNA-binding response regulator n=35 Tax=pseudomallei group
           RepID=C4KWB3_BURPS
          Length = 210

 Score =  160 bits (404), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 7/203 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +  +G+  +             +          +      VI  F+      
Sbjct: 5   VLIADDHPLVLLGVRHMLAGMGDVSIVGEAHDPAGLLALLAA-TPCDIVITDFAMPEQPA 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL+ LT +   +P  R +V+   D    L+ ++  +    VLSK   L+   + L   
Sbjct: 64  ADGLAMLTAIRDGYPSVRVIVLTMLD-NPVLMHTMRQAGALAVLSKRGDLDELPRALAAV 122

Query: 131 LNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
             G                   +  R LSP E E++R  + G +MT IA +  R+IKT+ 
Sbjct: 123 YQGRPFVGTHAGAAGGGAMRGTDAPRQLSPREIEVVRLCATGMTMTDIANRYGRSIKTVS 182

Query: 186 AHKFNVMSKLGVSSDAGLLEAAD 208
            HK N M KLG+ SD  L   A 
Sbjct: 183 THKHNAMGKLGLKSDVDLFMYAT 205


>UniRef50_Q04UI4 Receiver component of a two-component response regulator n=4
           Tax=Leptospira RepID=Q04UI4_LEPBJ
          Length = 233

 Score =  159 bits (402), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 23/220 (10%)

Query: 1   MEHSRIKKRN-----VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS 55
           M HS+I ++      V++IE    +++ ++ L    +   +  H   SQ++ +D    I 
Sbjct: 1   MIHSKISQKTKPPYLVSIIEDNRHTALNLQELLSNSSDFQFLRHYPDSQKAIEDIPENIP 60

Query: 56  FAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS 115
              VI          + GL CL EL  K P T+ ++    + E +++ ++    + G L 
Sbjct: 61  -DIVILDIGLPG---KNGLECLKELKEKTPNTKYVIFTVFEDEEKIVEAIQ-GGVSGYLL 115

Query: 116 KASTLEIFHQELFLSLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILR 162
           K +  E+F  EL + + G    T R+             N    I  +  L+  + +IL 
Sbjct: 116 KDTPPELFLAELKVIILGGASLTPRIADKIIREFTKKEENQNPPIQNTLGLTKRQLQILN 175

Query: 163 FMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202
           F++ G ++  IA++L  +  T+  H   +  K+ V S + 
Sbjct: 176 FVALGMTVADIADELDISSHTVSRHIEKIYKKMEVHSKSE 215


>UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=2
           Tax=Coriobacteriaceae RepID=C7MN84_CRYCD
          Length = 215

 Score =  159 bits (401), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 90/208 (43%), Gaps = 13/208 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +VA+ +   +   G   +                +E++ D ++R+    ++   S    E
Sbjct: 3   DVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAY-DLVARVEPHVLLLDISMPPGE 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------LEI 122
              GL     ++  FP TR +++   +    L  +L       VL  +ST        ++
Sbjct: 62  --NGLIACERISCDFPSTRIIILTMFEETDYLFYTLRGGAAGYVLKNSSTEVLLGAIRKV 119

Query: 123 FHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
              E ++  N  +  + +L+ Q  +   N    LS  E EI   +++GY+  + A++L  
Sbjct: 120 ATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKLFI 179

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++KT+  H+  + +KLGV+S A L+  A
Sbjct: 180 SVKTVETHRSKIYAKLGVNSRAELVHLA 207


>UniRef50_B8E485 Two component transcriptional regulator, LuxR family n=4
           Tax=Gammaproteobacteria RepID=B8E485_SHEB2
          Length = 212

 Score =  158 bits (399), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 7/203 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   G+ SL      +   +    +       +++     +I  FS    + 
Sbjct: 5   IILADDHPIILTGVRSLMAGIQPSCEIVAEANNVSELWHTLAQHECDLLITDFSMPNDDN 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G++ + +L  K+P    +V+        ++ +L    ++G+L K S +      +   
Sbjct: 65  VDGMAMIKQLRRKYPNLPIIVLTQV-HNLGVLQALMQIGINGLLLKKSVIAELANTVKKV 123

Query: 131 LNG---VRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           L+G   +  A   L N+  INQ  T   LS  E E++R ++ G S+TQ+A  L R++KTI
Sbjct: 124 LSGSVYIGDAVRELLNEQGINQYSTPIELSLKEIEVVRLLANGMSVTQVASYLNRSVKTI 183

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
              K N M KLG+ SD+ L   A
Sbjct: 184 STQKTNAMQKLGLKSDSELFHYA 206


>UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24
           Tax=Gammaproteobacteria RepID=C6C961_DICDC
          Length = 211

 Score =  154 bits (389), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 8/202 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NVALI+  ++   G   L     G+   +  Y S      ++ +++    +   +     
Sbjct: 5   NVALIDDHIVVRSGFAQLLS-LEGDIQVVGQYASAADAGVSLLKLNVDVAVMDIAMPDE- 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GLS L  L  K P  R ++++  D  A +  +L       +  +    E+      +
Sbjct: 63  --SGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGACGYLTKRCGPEELVQAVRAV 120

Query: 130 SLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
              G     D +    +  Q       L+P EREI   +  G S+  IAEQL  + KT+ 
Sbjct: 121 HAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLSHKTVH 180

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            H+ NV+ KL  ++   L+  A
Sbjct: 181 VHRANVLDKLHCATTVELVHFA 202


>UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1
           Tax=Pectobacterium carotovorum subsp. carotovorum PC1
           RepID=C6DD36_PECCP
          Length = 218

 Score =  153 bits (386), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 83/202 (41%), Gaps = 8/202 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NVAL++  ++   G   L      +   +  Y S       + +      +   +     
Sbjct: 12  NVALVDDHIVVRSGFAQLLA-LENDIQVVGQYASAAQAWPHLLKQPIDVAVIDIAMPDE- 69

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GLS LT L  + P+ R ++++  D  A +  +L       +  +    E+      +
Sbjct: 70  --SGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGAGGYLTKRCGPEELVQAVRVV 127

Query: 130 SLNGVRQATDRLNNQWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
           S  G+    D L+   +  Q       L+P EREI   +  G S+  IAEQL+ + KT+ 
Sbjct: 128 SSGGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSHKTVH 187

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            H+ N++SKL   S   L+  A
Sbjct: 188 VHRANILSKLQCESTVELVHFA 209


>UniRef50_B2JIJ8 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B2JIJ8_BURP8
          Length = 235

 Score =  152 bits (384), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 79/205 (38%), Gaps = 10/205 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G E    KF G         S E     +       ++   +    + 
Sbjct: 7   VVVADDHPVILFGAEQALLKFQGIRVVARARQSTE-LVKILQTTPCDVLVTDLAMPGGQY 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
            +GL  +  L   FP    +V+   +  A L+  LS   +  V++K+  L      +   
Sbjct: 66  GDGLPLIGYLRRNFPDLPIVVLTMLE-NAALLKRLSELGVISVVNKSDDLSHIGLAVQHV 124

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                ++S +          N    N    LS  E E++R    G ++ +I+EQL R+IK
Sbjct: 125 SRHIEYMSPSVKSALDTLRMNTGGKNDEVILSKRELEVVRLFVSGMTIKEISEQLNRSIK 184

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           TI   K   M KLG+  D+ L + A
Sbjct: 185 TISTQKNTAMRKLGLERDSELFQYA 209


>UniRef50_A9BU04 Two component transcriptional regulator, LuxR family n=2
           Tax=Proteobacteria RepID=A9BU04_DELAS
          Length = 217

 Score =  152 bits (383), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 47/208 (22%), Positives = 90/208 (43%), Gaps = 11/208 (5%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  +A+++   +  +G++    +   N   + T+++  S            V+  +S   
Sbjct: 4   KLRIAVVDDHAVVLLGVKDFL-EQDPNLQVVATFSTPSSLMQYARSNPLDVVLTDYSMPG 62

Query: 68  SE-RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
            +   +GL  +  L   FP  + LV+        +I +L  + + GVL K   L      
Sbjct: 63  DDVYGDGLRYVDYLIRHFPDIKVLVLTTVS-NPMIISALYDAGVAGVLLKEDPLTQIMAA 121

Query: 127 L--------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           L        + S +       +  + +   ++ +LSP E E+LR  + G S+T+IA +L+
Sbjct: 122 LQCVRLNARYYSPSFQADTPRQERSVFLAERANSLSPREFEVLRHFANGESITEIAARLR 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           R++KT+   K + M KL V S+  L   
Sbjct: 182 RSVKTVSLQKNSAMRKLNVDSNQDLAAF 209


>UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ
          Length = 218

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 84/216 (38%), Gaps = 27/216 (12%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G   +                 E++Q  +       +I   S    E 
Sbjct: 3   IVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRP-DVLILDLSMPPGE- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL   ++++  FP T+ L++   D E  L   L       +L  +       ++L L+
Sbjct: 61  -SGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPD-----EQLILA 114

Query: 131 LNGVRQATDRLNNQW-------------------YINQSRTLSPTEREILRFMSRGYSMT 171
           +  V Q    ++ +                      +  + LS  E EIL  +++GY   
Sbjct: 115 VRTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNK 174

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            IAE+L  ++KT+ AHK ++M+KL + S   L+E A
Sbjct: 175 DIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYA 210


>UniRef50_B8L629 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L629_9GAMM
          Length = 225

 Score =  150 bits (379), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQE---SFQDAMSRISFAAVIFSFSAMR 67
           + + +   +   G+        GN   +      E   S  DAMS++     +  FS   
Sbjct: 5   IVIADDHPVILAGVRE----ALGNEPGITVVAGAEDSTSLVDAMSKLPVDVAVTDFSMPG 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
            +  +G++ L  L  +F     +V+        ++ S+  + +  +++KA  +      +
Sbjct: 61  GKYGDGVALLGFLRRRFAGIPLVVLTGVGGTQ-VLASIRKAGVACIVAKADPISELASAI 119

Query: 128 FLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             +  G    +  +  Q           L+  E E+LR ++ G S T+IA QL+R+ +TI
Sbjct: 120 RAARKGEGYLSADVERQLASRPEGGEAHLTKREAEVLRLIAEGLSQTEIAAQLQRSRQTI 179

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
              K + M KLG+   A + E A
Sbjct: 180 STQKHSAMRKLGMQRPAEIFEYA 202


>UniRef50_B1Z6J3 Two component transcriptional regulator, LuxR family n=4
           Tax=Burkholderia RepID=B1Z6J3_BURA4
          Length = 225

 Score =  150 bits (379), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 87/206 (42%), Gaps = 8/206 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V       +S  G+E +  K       +    S ++  D++SRI    V+  ++   + +
Sbjct: 8   VIFANDRPLSLAGMEYVAGKANA-INLVGVCRSSDTLIDSISRIHCDVVLIDYAIRGNGK 66

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           REG++ L  L   +P+   +V+   +    +I ++    ++ ++SK   +      +   
Sbjct: 67  REGMALLGYLRRTYPQVGMVVLVTHE-NPVIIQAILDLGVESLVSKLDDVGHIVTAIHAC 125

Query: 131 LNGVRQATDRL------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             G    + ++      +          LSP E E++R    G ++ QIA +L R   TI
Sbjct: 126 YGGGSYLSPQIKRSLASSGGDGRRPPLRLSPREIEVIRLYLSGMTINQIAGRLNRGKPTI 185

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADIL 210
            + K + M KLGV  D  L+  A  L
Sbjct: 186 SSQKISAMKKLGVKGDVELVRYATCL 211


>UniRef50_P69409 Capsular synthesis regulator component B n=164
           Tax=Enterobacteriaceae RepID=RCSB_ECO57
          Length = 216

 Score =  150 bits (378), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 90/204 (44%), Gaps = 11/204 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV + +   +   GI     +       +  +    +  + + ++    +I   S    +
Sbjct: 5   NVIIADDHPIVLFGIRKSLEQIEWVN-VVGEFEDSTALINNLPKLDAHVLITDLSMPGDK 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127
             +G++ +  +   FP    +V+  +     ++ ++    ++G++ K        + L  
Sbjct: 64  YGDGITLIKYIKRHFPSLSIIVLTMN-NNPAILSAVLDLDIEGIVLKQGAPTDLPKALAA 122

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                  +   V +  ++++   Y +  + LSP E E+LR  + G+ +T+IA++L R+IK
Sbjct: 123 LQKGKKFTPESVSRLLEKISAGGYGD--KRLSPKESEVLRLFAEGFLVTEIAKKLNRSIK 180

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           TI + K + M KLGV +D  LL  
Sbjct: 181 TISSQKKSAMMKLGVENDIALLNY 204


>UniRef50_B1K7T2 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderia RepID=B1K7T2_BURCC
          Length = 231

 Score =  149 bits (377), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 81/202 (40%), Gaps = 7/202 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +      IG              + +  +     + ++      ++  ++   +E 
Sbjct: 9   IVIADDHPAVVIGARYELS-ATNTLAVVASANNSTELMETLANHPCDVLVSDYAMPGTEY 67

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL+  + +  ++P  R +V+   +  A  + +L    +  V+SK+         +  +
Sbjct: 68  GDGLAMFSAILKRYPNLRIVVMTMME-NAVALRALLDLGIACVVSKSDMTSHLTMAIHAA 126

Query: 131 LNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
               R  +  ++           ++  LS  E E++R  + G S+  IAEQL R+ KTI 
Sbjct: 127 YTNGRYLSPSMDRILRAAGNSGGKAPALSARELEVIRLFASGLSVNDIAEQLSRSKKTIS 186

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
             K + M KLG+  D  L+  A
Sbjct: 187 TQKSSAMQKLGIERDVDLVRYA 208


>UniRef50_B8L628 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L628_9GAMM
          Length = 199

 Score =  149 bits (376), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 11/198 (5%)

Query: 19  MSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIFSFSAMRSERREGLS 75
           M  +G++S+  +       LH   + +        + R     ++  ++       +GL+
Sbjct: 1   MIRLGVQSVLDEA----PALHCIGAAQDSTELVALLQREPCDVLVTDYAMPGGAHGDGLA 56

Query: 76  CLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVR 135
            L  L   FP+ R +V+   D +  L+  L    + G++SK   L+     +  +    R
Sbjct: 57  LLDYLGAHFPQLRIVVMTGLD-QPSLLNRLDAHGVHGIVSKGDDLQHVQSAVMAAYANRR 115

Query: 136 QATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192
             +     + ++    ++  LSP E+E++     G S+ +IA +L R  +T+   K N M
Sbjct: 116 FLSPSVAEILDRREQRRATALSPREQEVVELFIAGLSVAEIARKLDRKKQTVSTQKNNAM 175

Query: 193 SKLGVSSDAGLLEAADIL 210
            KLG+  DA LL  A  L
Sbjct: 176 RKLGIERDAELLTFAADL 193


>UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531
           RepID=C4V1Z2_9FIRM
          Length = 209

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 91/205 (44%), Gaps = 14/205 (6%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           +++  ++   GI+ L +  +         + +E+ +  +++     VI   S        
Sbjct: 2   IVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALR-LLAQQPIDLVIMDISMPGMG--- 57

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-------HQ 125
           GL+C+ E+   +P  + LV++  + E  +  ++    +  +   ++  E+F         
Sbjct: 58  GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAMGYLPKTSADNELFDALQVLSQG 117

Query: 126 ELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             +LS N  +   D   R   +   +    L+  ERE+   +  GY++T+IAEQL  ++K
Sbjct: 118 RRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLSVK 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  HK ++  KL  S  + L+  A
Sbjct: 178 TVDTHKKHIYEKLHCSRRSELVTLA 202


>UniRef50_B4SSH8 Two component transcriptional regulator, LuxR family n=3
           Tax=Stenotrophomonas RepID=B4SSH8_STRM5
          Length = 212

 Score =  147 bits (372), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 89/204 (43%), Gaps = 10/204 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +  IG  ++  + +G    +    S ++    +       ++  +S   S +
Sbjct: 5   IIIADDHPVVRIGTRAVI-ESSGVGRVVGEADSAQALMTLLGSQPCDLLVTDYSMPGSPQ 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G + +  +  + P    L+++       ++  +  S + G++ K+S+++   Q +   
Sbjct: 64  ADGFAMIGMIRRRHPDLPVLMLSV-SNNLAILRMVLDSGVLGLVDKSSSMDELPQAIQAV 122

Query: 131 LNGV----RQATDRLNN----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G     R   +R+      +      + LSP E E+LR +  G ++ +I+ QL +++ 
Sbjct: 123 YRGQPYISRSLRERVEAAGSWRMREGDGKPLSPREVEVLRLLGTGMTVKEISLQLHKSVS 182

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           TI   K + M KLG+  DA L + 
Sbjct: 183 TISRQKGDAMLKLGLKGDAELFDY 206


>UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3
           Tax=Proteobacteria RepID=Q313W8_DESDG
          Length = 223

 Score =  147 bits (371), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 54/216 (25%), Positives = 85/216 (39%), Gaps = 18/216 (8%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + E   +   G++SL +              Q    D   R     V+   S     R +
Sbjct: 9   IAEDHTLLREGLKSLLQSVPHLIVTGEASDGQ-MAVDLCDRNQPELVLMDISMP---RMD 64

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125
           G+     +  + P  R LV+        +  +L+      VL  AS  E       +   
Sbjct: 65  GVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGADGYVLKDASNDEFILAVESVLGG 124

Query: 126 ELFLSLNGVRQATDRLNN----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           +++LS            N    Q   +   TL+P E+EI + ++ GY   +IAE L  ++
Sbjct: 125 KIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEMLVVSV 184

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA---DILLCMR 214
           KT+  H+ N+M KLGV S A L   A    I+L MR
Sbjct: 185 KTVEKHRSNLMQKLGVHSAAELRALALERGIILRMR 220


>UniRef50_B1K3F3 Two component transcriptional regulator, LuxR family n=2
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F3_BURCC
          Length = 213

 Score =  147 bits (371), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +   +  +G   L  +  G         S E     ++ ++   VI  FS   + R
Sbjct: 5   VVLADDHPIMLLGCR-LLIEQNGMEVVGEARDSSE-LMSILAHVACDVVITDFSMPNTGR 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLEI 122
            +GL+ L+ L  +      +V+ +    A L+ ++    + G++ K        A+    
Sbjct: 63  ADGLAMLSTLRREHGALPVIVLTNM-ANAGLLRAMLNEGVLGIVEKGAEKSELFAAVRTA 121

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
               +++S    R+ T     +    ++  L+P E E+LR ++ G S T++ + L R IK
Sbjct: 122 LRGAIYISARLQRELTKLGLTEMESQRAANLTPRELEVLRLLASGKSPTEVGQMLHRTIK 181

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           T+   K +   KLG+ SDA L E 
Sbjct: 182 TVSWAKTSAKRKLGLKSDAELYEY 205


>UniRef50_B1K7T3 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B1K7T3_BURCC
          Length = 241

 Score =  147 bits (370), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 83/210 (39%), Gaps = 12/210 (5%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           +  V L +    +  G++              +  +       +       ++  ++   
Sbjct: 5   QIRVVLADDHPATLGGVQHGLSSVP-TIRLTGSAGNSTELIALLDAGVCDVLVSDYAMPG 63

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
               +G++  + L   +P  + +V+   D    +I  L    +  ++SK+  ++     +
Sbjct: 64  GAYGDGIALFSYLQRNYPAVKLVVLTMLD-NPAVIKGLLGLGISCIVSKSDAVDHLIPAV 122

Query: 128 FLSLNG----------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
             +  G          + +     ++   ++Q++ LS  E E++R  + G ++ +IAE+L
Sbjct: 123 HAAATGGTYYSPSFEKIVRTLSAHSSARIVDQAQNLSSREIEVVRLYASGMTVNEIAEKL 182

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            R+ KTI   K   M KLGV  D  LL  A
Sbjct: 183 SRSKKTISTQKARAMQKLGVEKDIDLLRYA 212


>UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3
           Tax=Chloroflexus RepID=B8GAC9_CHLAD
          Length = 213

 Score =  146 bits (369), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 12/205 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+  L               S+ +   A + +    ++   S   S  
Sbjct: 4   ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQATT-LQPDLILLDLSLTNS-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
             GL+ +  L    P+ R LV+   D E  +  +L+      VL +A+  E       + 
Sbjct: 61  -SGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGAHGYVLKRAADAELIAAIRAVL 119

Query: 124 HQELFLSLNGVRQA-TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             EL++     R+   D L      N   +LS  ERE+L  ++RGY+  +IA QL  + K
Sbjct: 120 RGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSPK 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  ++   M KLG+ S A L++ A
Sbjct: 180 TVETYRTRGMEKLGLRSRAALVQFA 204


>UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8
           Tax=Bacteria RepID=Q2RMH6_MOOTA
          Length = 221

 Score =  146 bits (369), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 84/209 (40%), Gaps = 15/209 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G+ +L  +  G+   +    S               V+          
Sbjct: 5   VMLVDDHALVREGLRALLERE-GDIEVVGETGSAAGVLALAEESRPEVVVMDLQL--GAG 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
           R G+    EL  K P  + ++++  D E  +  +L       VL +A   E       + 
Sbjct: 62  RNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGARGYVLKRAGIEELTTAIRLVA 121

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLK 178
             E +L     R+  + L  +    ++       L+  E E+LR  + G +  +IA +L 
Sbjct: 122 RGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIARRLV 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            ++KT++AH+ N+M KLG+     L++ A
Sbjct: 182 ISVKTVQAHRANIMQKLGLHDRVDLVKYA 210


>UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteria RepID=B1ZVM0_OPITP
          Length = 219

 Score =  146 bits (368), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 87/207 (42%), Gaps = 14/207 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   GI +L  K  G          +E+    +   +    I   +      
Sbjct: 7   IVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRET-VTLVHTFAPDIAIMDITMPG--- 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
             G      +A + PRT+ L+++    E  ++ +L       +L  A+T E       + 
Sbjct: 63  LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGATGYLLKDAATAELQLALNAVR 122

Query: 124 HQELFLSLNGVRQATDRLNNQWY---INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
             E +LS +  +    R   Q        ++ L+P  REI++ ++ G S  +IA  L  +
Sbjct: 123 KGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIAFLLNLS 182

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +KTI  H+ ++M++LG+   AG++  A
Sbjct: 183 VKTIETHRMHLMARLGLHDVAGVVRYA 209


>UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37
           Tax=Bacteria RepID=D1AEE5_THECD
          Length = 244

 Score =  145 bits (367), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 79/214 (36%), Gaps = 16/214 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD----AMSRISFAAVIFS 62
            K  + L +   +   G+  +                 E+ +     A +       +  
Sbjct: 26  AKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVLD 85

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            +     R  GL    EL+  +PR R L++   D E  L  +L       VL   +  ++
Sbjct: 86  VAMP---RMTGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAAGYVLKSLADRDL 142

Query: 123 F-------HQELFLSLNGVRQA--TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
                     E FL    +     +     +        L+P E EIL+ ++ G+S  +I
Sbjct: 143 VQACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSREI 202

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           A+ L  ++KT+  H+ N+++KLG+     L   A
Sbjct: 203 ADTLFISVKTVERHRANILAKLGMKDRLELTRYA 236


>UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VTE0_9BACI
          Length = 219

 Score =  145 bits (367), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 49/213 (23%), Positives = 89/213 (41%), Gaps = 18/213 (8%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L++   +   G++ +    A           + + + A +  +   +I   S   
Sbjct: 2   KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEADDGESAIEMA-AEANPDIIIMDISMPG 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
               +G+    E+  K P  R L++     EA L  SL       VL +A   E+ H  +
Sbjct: 61  ---LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGASGYVLKRAVDTELVH-AV 116

Query: 128 FLSLNGVRQATDRLNNQWYI-------------NQSRTLSPTEREILRFMSRGYSMTQIA 174
            L +NG       L  + Y              NQ+  LS  E+E+L++++ GY+  +I+
Sbjct: 117 KLVMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEIS 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +L  +IKT+  +K  VM K+G    + L+  A
Sbjct: 177 TELFISIKTVDTYKKRVMEKIGSKKKSALVRYA 209


>UniRef50_B9B5Q9 CblR n=4 Tax=Burkholderia cepacia complex RepID=B9B5Q9_9BURK
          Length = 220

 Score =  143 bits (362), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 5/199 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +S  G+++           +   +   S  D +   +   ++  +     + 
Sbjct: 8   VVIADDHPVSVHGMKAALS-AMPTIEIVAVTSDTTSLVDMLDAHACDVLVLDYVMPSGKY 66

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G + L+ L+ +FP  R + +        +  +L    ++ ++SK+  +      +  +
Sbjct: 67  GDGQTLLSYLSRRFPTLRYVTVTML-NSPAVFRALQELGVNSIVSKSDPMSHLIAAIHAA 125

Query: 131 LNGVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
            +G R  +  + +     +S    TLS  E EI+R    GY +T+IAE+L R+ KTI A 
Sbjct: 126 HSGGRYLSPTIASLLERTESAAGATLSKRETEIVRLFREGYKVTEIAEKLHRSKKTISAQ 185

Query: 188 KFNVMSKLGVSSDAGLLEA 206
           K   M KLGV+SDA L+ A
Sbjct: 186 KLAAMRKLGVTSDAELIRA 204


>UniRef50_Q13FW8 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia xenovorans LB400 RepID=Q13FW8_BURXL
          Length = 215

 Score =  143 bits (362), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 13/209 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            +++ +        + ++ +        +H   + +   DA+S++    V+  FS  R +
Sbjct: 5   TISIADDHPFVLASMTAVLQGVPQFA-VVHQCANGKDLLDALSKVETDLVVTDFSMTRED 63

Query: 70  R-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL- 127
           R  +G   L EL  + P  + +V+    + A +        +  ++SK  ++    +   
Sbjct: 64  RSVDGFGLLAELRRRHPDVK-IVLLTALVNAGIFTRALSVGVGALVSKTDSISELARACA 122

Query: 128 --------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                   +LS   V+      +          L+P E E++R +  G S+ QIA QL R
Sbjct: 123 RVKISRSPYLSP-AVQSIIHGASMDHPNTSKARLTPKELEVVRLLVAGRSLAQIASQLGR 181

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           +  TI   K+N   K+G +S   L+  A 
Sbjct: 182 SPSTISTQKYNASRKIGATSYTQLIRYAY 210


>UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YIR2_THEYD
          Length = 213

 Score =  143 bits (362), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 93/211 (44%), Gaps = 17/211 (8%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF--QDAMSRISFAAVIFSFS 64
           K+  V +++   +   G++ +       PY      ++  +   D +S+ SF  V    +
Sbjct: 3   KRLKVLIVDDHTLFRKGLKEIL---LDTPYIKECKEAKSGYEAIDILSKESFDIVFLDIA 59

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   G+  L ++ I +P T+ L+++    E   I SL      G L+K++  E   
Sbjct: 60  M---SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPEELL 115

Query: 125 QEL--------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
           + +        +L      +    ++    I     LS  E ++   +++G S+ +I+++
Sbjct: 116 KAVDKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKE 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L  +IKT+  ++  ++ KLG+ ++A ++  A
Sbjct: 176 LSISIKTVSTYRARILEKLGLENNAEIINYA 206


>UniRef50_A6V5P3 DNA-binding response regulator, LuxR family n=10 Tax=Proteobacteria
           RepID=A6V5P3_PSEA7
          Length = 221

 Score =  143 bits (360), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 51/232 (21%), Positives = 91/232 (39%), Gaps = 20/232 (8%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M+   + K  + L +   +  +G+  +  +       +   ++         +      I
Sbjct: 1   MQEKPMSKLKIVLADDHPIVRMGVCDMLERDPRFE-VVGEASNPSELVSLYRQADPHIAI 59

Query: 61  FSFSAMRSERR-EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
             +S    ER  +GL  +  L   FPRTR L+         ++ SL    + GV+ K+  
Sbjct: 60  TDYSMPGDERYGDGLKLIDYLLRNFPRTRVLIFTMVS-NRLILDSLYDHGVAGVVLKSGE 118

Query: 120 LE--------IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171
           L+        +    ++   + +  A    +     N+   LS  E E+LR    G ++ 
Sbjct: 119 LDELLLALDVVLQNRIYRGAHMIDPANVLTSRDEVENRFARLSMKEFEVLRHFVSGNNVC 178

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223
            IA  LKR++KT+   K + M KL V+SD  L         M  C  +N+ H
Sbjct: 179 DIARLLKRSVKTVSTQKISAMRKLEVNSDQAL---------MTFCVRANLFH 221


>UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2
           Tax=Acidobacteria RepID=Q01NJ8_SOLUE
          Length = 224

 Score =  143 bits (360), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 85/227 (37%), Gaps = 18/227 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  + L +   +   G+ +L    A          +         ++    V+     
Sbjct: 1   MSKTKILLTDDHTLFRQGVRTLLAAEADME-VAGEAANAMDAVALAQQLRPDVVLMDIGM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                         +  + P  + + ++  D E  L         +G + K S  +    
Sbjct: 60  AGM---SSFEATRLIRKERPEVKVIFLSMYDDEDYLAE-CVDMGANGYILKDSPADQLIT 115

Query: 126 ELFLSLNGVRQATDRLNNQWYIN-------------QSRTLSPTEREILRFMSRGYSMTQ 172
            +     G    + RL ++   +             +  TL+  EREIL+ ++ G S+ +
Sbjct: 116 AIREVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKE 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
           IA   + ++KT+ AHKFN+M KL + + A L++ A     +R  ET+
Sbjct: 176 IAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222


>UniRef50_B8L4M9 DNA-binding response regulator, LuxR family n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8L4M9_9GAMM
          Length = 223

 Score =  142 bits (358), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 6/201 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +A+ +   +  +G   +  +  G    +      ES    ++      V+  FS     R
Sbjct: 5   IAIADDHPLVLLGTR-IVIEAGGRHRVVAEARCAESLLAVLAEEPVDLVVTDFSMPDGGR 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G + L  L    P+   ++         L  ++  + + G++ K S ++   + +   
Sbjct: 64  SDGQAMLQALRRNHPKVPVILATMVTNATTLNMAMR-TGVRGLVCKGSGVDGIRRAVDTV 122

Query: 131 LNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
           L+G      +    L +         LSP E E+LR    G S+T+IA QL+R + TI  
Sbjct: 123 LSGGIYLDPELAHCLQDAGRERSLSVLSPKELEVLRLYVSGPSITEIAAQLRRTVSTISR 182

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
            + + M KLG+S+DA L   A
Sbjct: 183 QRISAMRKLGISNDAELFAYA 203


>UniRef50_D0IY57 Two component transcriptional regulator, LuxR n=1 Tax=Comamonas
           testosteroni CNB-2 RepID=D0IY57_COMTE
          Length = 201

 Score =  142 bits (358), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 18/210 (8%)

Query: 21  SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80
            +G+  L ++           +S E    A+++     VI  +    S+  +G+  +  L
Sbjct: 2   LMGLGDLLKQNIHLTLTATASSSTE-LVAALTKSLPDIVIVDYHMPDSQYGDGIKFIGYL 60

Query: 81  AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL-EIFHQELFLSLNGVR---- 135
             +F   + +V+        ++ +L  + + GV+ K     E+F     +SL  +     
Sbjct: 61  LRQFEGLKVIVLTMLS-NPMIVKALYKAGVKGVVFKQDDPSEVFKAIRLVSLGNIYTPPS 119

Query: 136 --QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193
             +    L +Q    + ++L+P E E+LR+  RG S+ +IAE+L R+IKT+ + K   M 
Sbjct: 120 FLETNVSLQHQMLQERFKSLTPREFEVLRYYVRGGSLAEIAERLNRSIKTVSSQKMTAMR 179

Query: 194 KLGVSSDAGLLEAADILLCMRHCETSNVLH 223
           KL   S+  L         M  C  S V H
Sbjct: 180 KLEAKSNQEL---------MAFCLNSGVFH 200


>UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD
          Length = 224

 Score =  142 bits (357), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 88/215 (40%), Gaps = 15/215 (6%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M H+R     V +++   +   G+  +    AG          +++ + A+ +     ++
Sbjct: 1   MAHTR-----VVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAV-KDRPDVML 54

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                   +  +G++    L    P+ R +++   D    +   +  + + G++ K    
Sbjct: 55  MDVHMP--QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHV-EKMLDAGVSGIVFKHDDS 111

Query: 121 EIFHQELF----LSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIA 174
                 +           R+   R N +       +  LSP E E+L  +++GY+  ++A
Sbjct: 112 SEIVAAIQHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVA 171

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           + L  ++KT+  H+ ++M ++G+ S A L+  A  
Sbjct: 172 DALHISVKTVETHRQHIMRRIGLHSRAALVRYAYQ 206


>UniRef50_A9AQJ5 Two component transcriptional regulator, LuxR family n=34
           Tax=Proteobacteria RepID=A9AQJ5_BURM1
          Length = 224

 Score =  141 bits (356), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 6/205 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +    S+IG+  +    +     + T ++      A+       ++  +     + 
Sbjct: 8   VMVADDHPSSAIGMSRVLA-ESSTIELVGTVSNSTDLVAALEEKPSDVLVLDYVMPGGKF 66

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL  L+ L  ++P  R + I   D    ++ ++    +  +LSK+  +      +  +
Sbjct: 67  GDGLVLLSFLQRRYPALRIVTITMID-NPSVLHAIRRQGVGCILSKSDAISHLVGAVHAA 125

Query: 131 LNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
                         L++       R L+  E E++R  + G ++ +IA QL R+ +TI +
Sbjct: 126 FVCADYQSPHIRHLLDSAGSSVTERRLTTREIEVVRLYAAGLTVGEIASQLHRSKQTISS 185

Query: 187 HKFNVMSKLGVSSDAGLLEAADILL 211
            K + M KLG+  DA L+  AD  +
Sbjct: 186 QKASAMKKLGIVRDADLIRFADEGM 210


>UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales
           RepID=C0ZDE8_BREBN
          Length = 214

 Score =  141 bits (355), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 92/205 (44%), Gaps = 12/205 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   M   G+  L   ++       ++T  ++   A +++    V+   S      
Sbjct: 4   VLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKA-NQLKPDVVLMDLSLPNG-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G +   E+    P  + +++   D E  +  +++     G + K S  E+  Q +   
Sbjct: 61  LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGA-HGYILKNSHGELLFQAIVEV 119

Query: 131 LNGVR----QATDRLNNQWYINQSRTL----SPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G        +  + N W  + ++TL    +  E+E++R +  GYS  ++A++L  ++K
Sbjct: 120 YRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLISVK 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  HK N+M KLG+ S   L++ A
Sbjct: 180 TVENHKTNIMQKLGLDSKHQLIQYA 204


>UniRef50_A9BWP2 Two component transcriptional regulator, LuxR family n=1
           Tax=Delftia acidovorans SPH-1 RepID=A9BWP2_DELAS
          Length = 218

 Score =  141 bits (355), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 8/202 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +       GIES+  +       +    +       + +     ++  +S      
Sbjct: 8   ILIADDHPAVLAGIESVL-EDKHEIEIVGRAKNSTEIISFLKKNECDVLVTDYSMPGGAY 66

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL  L  +  +FP  + +++   +    +I SL+   +  ++ K  +L      ++ +
Sbjct: 67  GDGLVMLNVIRKRFPSVKIVMLTMIE-NIGIIKSLTNQGIYRIVHKTDSLGSLLPAIYAA 125

Query: 131 LNGVR----QATDRLNNQW--YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
               +     A+  L  +W   +  S  LS  E E+L     G ++++IA++L R+IKT+
Sbjct: 126 YTDGQFISPSASKLLGGEWLGAVRTSIELSKREEEVLLLFISGMTVSEIAKKLYRSIKTV 185

Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206
             HK  VM+KLG+  D  L+  
Sbjct: 186 STHKVAVMNKLGIRKDIDLIRY 207


>UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT
          Length = 220

 Score =  141 bits (355), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 17/209 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L+E   +   G+++L          +       +  +A  R++   V+   +     +
Sbjct: 7   VLLVEDHTIVREGLKALLTATEDLE-VVGEVADGRAAVEAAERLAPDVVVMDINMP---K 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+    E+  K    R L+++  D E  +  ++      G L K S L      +   
Sbjct: 63  LDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGA-SGYLLKGSGLSDLVTAIREV 121

Query: 131 LNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
             G    +  +              +   + + +L+  ERE+L  +  G S  +IA+ L 
Sbjct: 122 AGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPEIAKILG 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            ++KTI  H+  +M+KLGV + AGL+  A
Sbjct: 182 LSVKTIEGHRGRIMAKLGVHNVAGLVRQA 210


>UniRef50_Q48NF8 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas
           syringae pv. phaseolicola 1448A RepID=Q48NF8_PSE14
          Length = 212

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 91/207 (43%), Gaps = 10/207 (4%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           +  + + +   +  +G + +  K  G+   +    + E  +  +       ++  F+   
Sbjct: 2   QLRIIIADDHPVVLLGAKIIVEK-GGSGLVVGQAENPEELEAILKSTPCDLLVTDFAMPN 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
           S RR+GL  L  L    P  + +V+      + ++G L+   + GV+ K +      + +
Sbjct: 61  S-RRDGLIMLKRLRRLHPELKIIVLTSIRNSSLILGILNL-GIQGVVEKNADQFELIEAI 118

Query: 128 FLSLNGVRQATDR-------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                  R  +         ++   +   S  LSP E E++R ++ G +  Q+AE+L R+
Sbjct: 119 KKVARHQRYISPFFREALADVSILNFDRPSVKLSPKELEVVRLLAIGLTQAQVAEKLSRS 178

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           IKTI   K +  +KLG+ +DA L + A
Sbjct: 179 IKTISWTKVSAKTKLGIKTDAELYQYA 205


>UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1
           Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q024Y7_SOLUE
          Length = 225

 Score =  140 bits (354), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 89/209 (42%), Gaps = 15/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ L++   +   G+  +  + +     +    +         + S   V+         
Sbjct: 4   DIVLVDDHKLVRDGVRMILERGSEF-LVVGEAENGADAVQLCKKSSPDIVLMDIGLPGM- 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+   TEL    P  + ++++  D E  ++ ++       VL KAS+ E+      +
Sbjct: 62  --NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELLDALRTV 119

Query: 130 SLNGVR---QATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           +  G     Q +DRL  +           +   +LSP E ++LR ++ G +   IA  L 
Sbjct: 120 ARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLD 179

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++T+R+++  +M KLGV++ AGL + A
Sbjct: 180 LGLQTVRSYRKTMMKKLGVNNVAGLTQLA 208


>UniRef50_Q2L102 Putative two-component response regulator of capsular synthesis n=1
           Tax=Bordetella avium 197N RepID=Q2L102_BORA1
          Length = 231

 Score =  140 bits (354), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 6/202 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +       GI+  F  F      +            + ++    V+  ++      
Sbjct: 5   IILADDHPALLAGIQHQFSNFP-TLEVVGLARESGELISLLEKVPCDVVVTDYAMPGGRF 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G++ +  L   +P  + +V    D  A +   L+   +  VL+K +        +  +
Sbjct: 64  SDGMALILYLRRIYPNIKLIVFTAMDNGA-ISQELAKLGVHAVLNKVNDTNHLVSAIHAA 122

Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
             G              +   ++ + LS  E E++R    G S+ +IA+QL R  +TI +
Sbjct: 123 YAGSTYYRPNQARTPRPEAEQSEFKPLSRRELEVIRLYISGLSVQEIADQLHRTKQTISS 182

Query: 187 HKFNVMSKLGVSSDAGLLEAAD 208
            K + M KL ++ DA L   A 
Sbjct: 183 QKSSAMRKLDITRDADLFRFAY 204


>UniRef50_C4I5I0 Regulatory protein, LuxR:Response regulator receiver n=21
           Tax=pseudomallei group RepID=C4I5I0_BURPS
          Length = 242

 Score =  140 bits (353), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 11/205 (5%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +       GIE    K +       T ++     D ++R     +I  ++       +
Sbjct: 19  VADDHPALIAGIEHALSKSSAIS-VAGTASNSTELVDLLARERCDILITDYAMPGGSHGD 77

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLEIFH 124
           GL  L+ L    P  + +V    D    LI S++      +++K        A+   ++ 
Sbjct: 78  GLGLLSFLRRHHPDLKIIVFTAID-NPALIASMARLGARAIVNKMDHIDNLIATVQAVYA 136

Query: 125 QELFLSLNGVRQATDRLNNQWYINQ-SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               L       A+ RL       +  R LS  E EI+R    G S+ +IA  L R+ + 
Sbjct: 137 GASCLPAGIGAFASSRLPVDGEAPEIERQLSARELEIVRLYVSGLSVNEIAAYLHRSKQA 196

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAAD 208
           +   K N M KLG+  DAGL   A 
Sbjct: 197 VSTQKMNAMRKLGIERDAGLFRYAY 221


>UniRef50_Q4KHP5 DNA-binding response regulator, LuxR family n=12 Tax=Pseudomonas
           RepID=Q4KHP5_PSEF5
          Length = 220

 Score =  140 bits (353), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 11/215 (5%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M+ +   K  + L +   +  IG+ ++  +   +   +   +S  +    M  I    ++
Sbjct: 1   MKATTNNKLRIILADDHPIFLIGLRAVL-EQDDSLAIVGEASSPSALAQLMQEIECDVLV 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
             F     ++ +GL  + +L  + P    +V+   +    L  S+    + G+LSKAS  
Sbjct: 60  TDFMMPAEQQNDGLRLIEQLRRRHPDLPIVVVTMLNH-PGLFRSILDLGVTGLLSKASLA 118

Query: 121 EIFHQELFLS-------LNGVRQATDRLN--NQWYINQSRTLSPTEREILRFMSRGYSMT 171
           +     +  +          ++QA           +  S  LSP E E++R ++ G+++ 
Sbjct: 119 DELPTAIARARQHKPYIAQAIKQALSLAGEVGPDRLVSSDQLSPRELEVIRLLAAGHAVG 178

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           +IA QL R+ +T+ A K + M KLG+SS+A L   
Sbjct: 179 EIAAQLNRSKQTVSAQKVSAMRKLGLSSEAALYIY 213


>UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio
           magneticus RS-1 RepID=C4XNR8_DESMR
          Length = 220

 Score =  139 bits (351), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 16/208 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   G+  L          +      E+    + R+    ++   S     R
Sbjct: 6   IILADDHTVLRTGLRLLIDNQPDFT-VVGEAADGEALLALVERVPAEVLVLDLSMP---R 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123
             GL C+ EL  +    + LV+     E  +  +++   L  +  +A   E+F       
Sbjct: 62  VSGLECIKELKSRGQEIKILVLTMHGRE-YVKEAMAAGALGYIEKQALDSELFVAIRTVA 120

Query: 124 HQELFLSLNGVRQATDRL----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
               ++S +      D+L          +    L+  ERE+L+ + RG+++TQIA  L  
Sbjct: 121 SGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQIAGLLHL 180

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++KTI  HK +VM KL ++  + L++ A
Sbjct: 181 SVKTIDTHKTHVMEKLNLTHKSQLVDYA 208


>UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2
           Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN
          Length = 226

 Score =  138 bits (349), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 82/206 (39%), Gaps = 16/206 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +I+   +    +       + +   +      E+ Q    R S++ V+   S  R   
Sbjct: 21  VLIIDDHALLGESLARFLG--SNDMQAVWCGDLVEAMQSIRDR-SWSVVLLDLSMPRG-- 75

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  L  + +  P    L+++    +   + +L      G L+K  + ++  + +   
Sbjct: 76  -NGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALR-GGAAGYLTKGCSPDVLVEAIQKV 133

Query: 131 LNGVRQATDRLNNQWYI---------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           ++G R  T  +  Q                 LS  E ++   +  G S+ Q+A++L  + 
Sbjct: 134 VHGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQVADELHISC 193

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  HK  +M KL + +DA L+  A
Sbjct: 194 KTVSTHKTRLMHKLALDNDADLVRYA 219


>UniRef50_D2QQM0 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QQM0_9SPHI
          Length = 214

 Score =  138 bits (349), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 90/210 (42%), Gaps = 13/210 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           K   + + +   + S G+ +L          +            + ++    ++   +  
Sbjct: 6   KSTTILIADDHQLFSDGLRTLLTTAHSPFTVIGQVYDGRDVIPVVHQLQPDLILLDINLP 65

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
               R G+    +L  +FP    ++I       +L   L    + G L K+++ +     
Sbjct: 66  ---HRNGVDIARQLRREFPHVGVVIITMYS-YQKLTEELRAVGVAGYLLKSASPDRLMTC 121

Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLK 178
           L   ++G +   D+L N+  I+   T        L+P E EI+R +  G S +QIAE+L 
Sbjct: 122 LTSVVSG-KPFFDQLPNELAIDPRETDPFVKQFSLTPREIEIIRLIRNGLSTSQIAERLF 180

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
            + +TI+ H+ N+  KLG++S A L+  A+
Sbjct: 181 LSAETIKTHRKNIYFKLGINSVAALILFAN 210


>UniRef50_A6V170 Probable two-component response regulator n=1 Tax=Pseudomonas
           aeruginosa PA7 RepID=A6V170_PSEA7
          Length = 213

 Score =  138 bits (349), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 88/207 (42%), Gaps = 10/207 (4%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  V L++   ++ IG+  L   F  +   +      +     +       +I       
Sbjct: 2   KTRVLLVDDHALTLIGMRCLLGAF-DDLQIVGQAQDADGLLTQLDTHPCDLLITDLMMPD 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
           S++ +GL  + ++  ++P+ + +V+        LI SL    + G++SK   L    + +
Sbjct: 61  SQQADGLRLVQKVRRRYPQLQIIVVTML-NNPALISSLLKLGIRGLVSKRGVLNDLPKAI 119

Query: 128 -------FLSLNGVRQATD-RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                  FLS +           +   +     L+P E E+LR    G ++ +IA +L R
Sbjct: 120 RHGGRRPFLSHSIGHLLDVGAAEHGKPLASLEELTPREVEVLRLYGSGLAIGEIALRLCR 179

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           + +TI A K + M KLG+ ++AGL   
Sbjct: 180 SKQTISAQKSSAMRKLGLDTNAGLYLY 206


>UniRef50_UPI000197BDC0 two component LuxR family transcriptional regulator n=1
           Tax=Providencia rettgeri DSM 1131 RepID=UPI000197BDC0
          Length = 217

 Score =  138 bits (348), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 12/211 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  + L++   +   G++    +       L  YT        + +     ++  +  
Sbjct: 1   MKKLKLVLVDDHPIVLSGLKDTLSQSMNLD-ILGAYTQDAELFAFLKKNEVDVIVTDYMM 59

Query: 66  MRS-ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
             + +  +G + +  L  ++P    +V+        ++  L  S +  V+SK + L    
Sbjct: 60  PNNTQSSDGQNYIQFLRRQYPNIAVIVLTMVS-NPMIVQMLYDSGVSAVVSKEAPLGDLM 118

Query: 125 QELFLSLNG------VRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAE 175
           + + L+  G      V   T  L ++  +   ++ +TLSP E E+LR   +G  +  IA+
Sbjct: 119 KAITLAGQGRQYRVPVADMTTTLKSRNAVTLNDRVKTLSPRELEVLRLFVQGKPIVDIAK 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           QL R+ KTI   K   M KLGV ++  L+  
Sbjct: 179 QLNRSDKTISLQKNAAMRKLGVDNNQALISY 209


>UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding
           protein n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFU8_DESAH
          Length = 219

 Score =  138 bits (348), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 84/214 (39%), Gaps = 16/214 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  V + E   +   G+ SL          +    +       +  ++   V+   S 
Sbjct: 1   MNKIKVLVAEDHTIVRKGLCSLLYSEPDIE-VVGEAENGREAIKMVEELAPDVVLMDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124
                  G+    +L  K+P  + L+++    E  +  +L       ++ +++  ++   
Sbjct: 60  PE---LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGASGYLIKRSAPTDLIKA 116

Query: 125 ------QELFLSLNGVRQATDRLNNQ-----WYINQSRTLSPTEREILRFMSRGYSMTQI 173
                  + FLS +  ++       Q             LS  ERE+L+ ++ G++  +I
Sbjct: 117 IHAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANREI 176

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           A  L  + KT+ AH+ ++  KLG++  A L + A
Sbjct: 177 AGHLYISPKTVEAHRNHIQKKLGLNGTAELTKYA 210


>UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderiaceae RepID=Q1LEP5_RALME
          Length = 214

 Score =  137 bits (346), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 75/203 (36%), Gaps = 10/203 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+  +  + +            E  Q  +  +S   ++   S      
Sbjct: 4   VIIADDHTVVRNGLRHILERTSDFEVVGEAARGTEVPQ-LVRELSPHVILLDLSMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           R GL  + +L    P  R LV+     E  ++ +        +  +++  E+      ++
Sbjct: 60  RNGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAAGYLTKESAATELVEALRKVA 119

Query: 131 LNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             G   +            +        LS  E E+ R +  G S+TQIA  L  + KT+
Sbjct: 120 AGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSAKTV 179

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             +K  +M KL + SDA L+  A
Sbjct: 180 STYKMRLMEKLQLRSDAALVRYA 202


>UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6
           Tax=Bacteria RepID=B1Y743_LEPCP
          Length = 211

 Score =  137 bits (345), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 79/205 (38%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G++ L    A         +  E   D   R ++   +  +       
Sbjct: 5   VFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHEV-IDQCGRFAWDVAVLDYRMPGKG- 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  + EL  +FP    LV++    +   +  L      G L+K S  E     +   
Sbjct: 63  --GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAA-GYLTKESAPEDLVNAIRKV 119

Query: 131 LNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G R  +  L  Q  ++ S          LS  E +I+  ++ G  + +IA+QL  +  
Sbjct: 120 ARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLSPN 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           TI  ++  ++ KL + S+A L+  A
Sbjct: 180 TISTYRKRILEKLDLKSNAELMRYA 204


>UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3
           Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD
          Length = 217

 Score =  137 bits (345), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 16/213 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           KK  + L +   +   G++ L                +E+  D +  +    V+   +  
Sbjct: 3   KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDGEEA-IDRVDDLHPDLVLLDLTMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--- 123
              +  G+ C+ EL  K    + LV+   D E  L   L       VL KA+ +E+    
Sbjct: 62  ---KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELLSAI 118

Query: 124 ----HQELFLSLNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
                 E+F+          R        +    + + LS  E E+LR ++ G++   IA
Sbjct: 119 RTVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDIA 178

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + L  ++KT+  +K  VM KL +   A L+  A
Sbjct: 179 DLLHVSVKTVETYKARVMEKLEMHKRAELVRYA 211


>UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FDP3_DESAA
          Length = 219

 Score =  137 bits (344), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 87/217 (40%), Gaps = 17/217 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M  S IK   + + E   +   G++SL    +     +    +  +  +   +     ++
Sbjct: 1   MTQSTIK---ILITEDHALVRKGLKSLISSRSEFQ-VVGEADNGLAAIEMTRKCKPDLIL 56

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S     +  GL+ + +L  + P  + LVI     +  LI +L       +L      
Sbjct: 57  LDLSMP---KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGADGYLLKGDDPQ 113

Query: 121 EIF-------HQELFLSLNGVRQATDRLNN---QWYINQSRTLSPTEREILRFMSRGYSM 170
           E+F         + +LS +   Q    + N   +   +   +L+  E+E+ + ++ G + 
Sbjct: 114 ELFMAIRAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTN 173

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            QIA+ L  + KT+  H+ N+M KL + S   +   A
Sbjct: 174 QQIADLLFISPKTVDKHRTNLMKKLDLHSAREVSNFA 210


>UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena
           ATCC 35185 RepID=C9LUT0_9FIRM
          Length = 216

 Score =  137 bits (344), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 72/202 (35%), Gaps = 9/202 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   G+  L                +E+ + A ++      +   S      
Sbjct: 10  ILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKA-AKTPVDIALLDLSMPHMG- 67

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL CL  L    P  R L++        +   L       +       E+F     ++
Sbjct: 68  --GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGANGYLCKDTLDAELFRALRTVA 125

Query: 131 LNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
             G                    +   LS  ERE+L  +  GYS++ IA++L  +IKT+ 
Sbjct: 126 AGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIADKLYLSIKTVS 185

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            +K  ++ KL  + ++ L++ A
Sbjct: 186 TYKTRLLQKLDCTQNSELVDYA 207


>UniRef50_B2U714 Two component transcriptional regulator, LuxR family n=5
           Tax=Ralstonia RepID=B2U714_RALPJ
          Length = 215

 Score =  137 bits (344), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 83/203 (40%), Gaps = 7/203 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ L +   +  +G+ +   +F         +  +E     ++ I    ++  ++     
Sbjct: 6   SIVLADDHPVILMGLAAAIGQFPQQQVVAQAHDGRE-LMQVLAHIDCNVIVTDYNLGGEP 64

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+  L  L  + PR   +V         L+  +    + G++SK          +  
Sbjct: 65  AFDGMQLLVRLRQQHPRCGIVVCTMV-HNPALLRGMRQIGVAGIVSKNDDFVHAGHAVMA 123

Query: 130 SLNGVRQATDRLNNQWYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           +  GVR  + R+  +  +  +       LS  ERE+LR  + G +++ IA+ L  ++KT+
Sbjct: 124 AARGVRYDSPRILEEAGLGSNDRNGFERLSAREREVLRLYAAGTAVSDIAQMLGSSVKTV 183

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
              K   + KLG+  +  L + A
Sbjct: 184 STQKAVALRKLGLVREIDLFQYA 206


>UniRef50_D0FMI8 Bacterial regulatory protein, LuxR n=3 Tax=Erwinia
           RepID=D0FMI8_ERWPY
          Length = 214

 Score =  137 bits (344), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 9/209 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  VA+ +        ++ LF           T    +     ++      VI  FS  
Sbjct: 3   SRFTVAVSDDHPHIIHSLKMLFSNNDKFTIATETGCG-KDLLAVLASAQTDIVITDFSLS 61

Query: 67  RS-ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--IF 123
                 +G + +  L+ +FP  + +V+        ++       +  ++SK+  +E  + 
Sbjct: 62  SKRSAIDGFAKIRALSGRFPLVK-IVLLTSQKNIAILRKTCDYGVKAIVSKSDPVEDTVI 120

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQS----RTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                ++ +G   ++   N + Y+++S      L+P E E++R  S GY++++IA +  R
Sbjct: 121 ACHHVMNQSGYYFSSSLSNIKSYLSKSGEKGNGLTPKELEVIRLFSSGYTLSEIARRQNR 180

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
            I T+   K+N M +LGVSS+  L+  A 
Sbjct: 181 TISTVSTQKYNAMRRLGVSSNVELIRYAY 209


>UniRef50_B2UFA9 Two component transcriptional regulator, LuxR family n=6
           Tax=Ralstonia RepID=B2UFA9_RALPJ
          Length = 222

 Score =  137 bits (344), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 89/207 (42%), Gaps = 12/207 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +        +  L     G    +   ++ +     ++R+     I  ++   S  
Sbjct: 7   LVIADDHPGVVAAVRRLVSGVHGFE-VVGEASNADELLAVLARVRCDLAITDYAMPGSRY 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+  L  L  + P  R +V+   +  A L+ ++  + +  ++SK+   +   + +  +
Sbjct: 66  GDGIILLEFLMRRHPDLRVMVLTMLETRA-LMSNILRAGIKVIVSKSDEPQHILEGMQAA 124

Query: 131 LNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
           ++G    +  LN +           + +    L   E E+LR    G ++++IA+QL R+
Sbjct: 125 VDGRIYLSPLLNAKLLCRNGEPQPAHDDPVAKLGKRELEVLRMYVTGKTVSEIAQQLNRS 184

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +KTI + K   M KL + ++A L + A
Sbjct: 185 VKTISSQKQTAMRKLELGNEAALFDFA 211


>UniRef50_Q1LDE9 Two component transcriptional regulator, LuxR family n=4
           Tax=Cupriavidus RepID=Q1LDE9_RALME
          Length = 214

 Score =  136 bits (343), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 79/203 (38%), Gaps = 8/203 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   GI        G       ++S E     +       ++  +S   S  
Sbjct: 4   VLIADDHPVVVNGIRRELGDEVGFEVVGTAHSSTE-LLRLLDTTQCDVLVTDYSMPGSAT 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL  L  +  + P  R +VI   D    L+ ++  + +  +LSK+  L      +  +
Sbjct: 63  GDGLPMLQLIRRRHPAVRIVVITMLD-NPALLRNIQKAGISVILSKSDHLGHLAPAIRAA 121

Query: 131 LNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             G+      +       +         LS  E E++R  + G  + +IA Q  R+ KTI
Sbjct: 122 FVGIAYLAPAVQALLGDASDDGGAPEPKLSKRELEVVRKCAAGVPLVEIARQANRSSKTI 181

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
            A K   M KLG++SD  L + A
Sbjct: 182 SAQKSMAMRKLGLTSDYELYQYA 204


>UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP
          Length = 235

 Score =  136 bits (342), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 11/204 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ +++  V+   G++ +              +  ++ +  M        I   S     
Sbjct: 14  HILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQALE-VMRHQPIDLAIVDLSMPGM- 71

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  +  +  +FPR R LV++    E   + +        V    ++ E+ +    +
Sbjct: 72  --NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGANGYVTKDGASAELVNAVRKV 129

Query: 130 SLNGVR-------QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           +  G         +   +LN          LS  E E+LR +  G  +T IAE L  ++K
Sbjct: 130 ATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLSVK 189

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           T+  HK  +  KL + + A L+  
Sbjct: 190 TVSTHKSRIQEKLQLPTMAALIRY 213


>UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ
          Length = 207

 Score =  136 bits (342), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L+E  ++   G+  L  +  G    +    S     + + ++     I   S      
Sbjct: 4   VVLVEDHLLVRSGLRHLL-EARGPVRVVGEAGSCREALELLEKVQADVAILDVSLPDG-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G++    L  +FP  R L ++  +    + G L      G +SKA+  +     +   
Sbjct: 61  -TGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGG-QGYVSKAAVDQELLDAVLAV 118

Query: 131 LNGVRQATDRLNNQWYIN------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             G R     L  +  +       +   LSP E E+LR +++G S  ++AE+L  + KT+
Sbjct: 119 ARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEKTV 178

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             ++   M KLG++S + LL  A
Sbjct: 179 ATYRERGMEKLGLASRSELLRYA 201


>UniRef50_B6VKY7 Pvp response regulator (Two-component response regulator bvg
           protein) n=2 Tax=Photorhabdus RepID=B6VKY7_PHOAA
          Length = 208

 Score =  136 bits (342), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 83/202 (41%), Gaps = 2/202 (0%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           R V + +   +  +G+ ++      N   +       +    +       +I  F+    
Sbjct: 3   RRVIIADDHPVFLLGLRTVLATLPENYQVVGEAHDVTALFSLLEEKEVDMLITDFNMPGD 62

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            + +GL  ++ +  ++P    +VI       ++I SL    +  +L+K S      + L+
Sbjct: 63  NQIDGLRMISRIRERYPSLPIVVITMISDR-KIIASLIDYKVKAILNKNSLSHELVKGLY 121

Query: 129 LSLNGVRQ-ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
            +        +++          + L+  E E+++ + +G S+  IA +L R  +TI A 
Sbjct: 122 STTGCHEPYLSEQFLESPGEEVVKALTSKELEVIKLLGQGLSVNDIAARLYRTKQTISAQ 181

Query: 188 KFNVMSKLGVSSDAGLLEAADI 209
           K + M KLG++++A L      
Sbjct: 182 KISAMKKLGLNNEAALYNYLHQ 203


>UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7
           Tax=Bacteria RepID=B1M5J4_METRJ
          Length = 222

 Score =  135 bits (341), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 78/208 (37%), Gaps = 15/208 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           VAL +   +   GI +L              +  E+     +       +   S      
Sbjct: 7   VALADDHPIVLAGIRTLLNADPEIELVGEATSGSEALPMIHAADP-DVAVVDVSMPG--- 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL     +A   PRTR LV+   +  A +   L       +L +++  ++      ++
Sbjct: 63  LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGARGYLLKRSAAEDLLRAVRAVA 122

Query: 131 LNGVRQATDRLNNQWYINQ-----------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
             G+       ++                 +  LSP E ++LR +++G+S  +IA +   
Sbjct: 123 AGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIARRFDL 182

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++K+I  +K     KLG+ + A ++  A
Sbjct: 183 SVKSIETYKARAAEKLGLRTRAEIIRYA 210


>UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT
          Length = 220

 Score =  135 bits (341), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L +   +   G+ +L    +           + + Q A   ++   VI   S   
Sbjct: 6   KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGRAAVQFAED-LAPDIVILDLSMPE 64

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                GL     +A   PR+R L++   + E  +  +L  + + G + K          +
Sbjct: 65  ---LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREAL-AAGVRGYILKTDAGRDLANAV 120

Query: 128 FLSLNGVRQATDRLNNQWYINQ------------SRTLSPTEREILRFMSRGYSMTQIAE 175
              + G      RL    Y  +               L+P EREIL+ ++ G     + +
Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            L  ++KT   H+  +M+KLG+ S A L+  A
Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYA 212


>UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria
           RepID=Q2LSF1_SYNAS
          Length = 217

 Score =  135 bits (340), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 82/209 (39%), Gaps = 16/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV L +   +   G+ +L                Q++   A   +    +I   S     
Sbjct: 4   NVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKTITLARE-LHPEIIIMDISMP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+    ++    P  + + ++       +IG L      G L K    E     +  
Sbjct: 60  DMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGA-SGYLLKDCAFEELVNAIQT 118

Query: 130 SLNGVRQATDRLNN---QWYINQ--------SRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            L+     +  + +   + Y+++        S  L+P ERE+L+ ++ G S  QIA  L 
Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            ++KT+  H+ N+  KLGV S A L++ A
Sbjct: 179 VSVKTVETHRRNITQKLGVGSVAELIKYA 207


>UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla
           marina ATCC 23134 RepID=A1ZYF0_9SPHI
          Length = 218

 Score =  135 bits (340), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 17/210 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           VA+ +  V+   G+ ++  +   N   ++   + +   D +       ++          
Sbjct: 5   VAIADDHVLFRKGLVTIL-ELDDNIEVVYGADNGKELIDKVDAQPPDVILMDLKMP---V 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+     +  K+P  + LV++  D E  +I  L       +L      E+ H    + 
Sbjct: 61  MDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGANGYLLKNTDPDELVHAIGTVM 120

Query: 131 LNGVRQATD-------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
                                 R   +     S  L+  E+E+L  + +  +  ++AE+L
Sbjct: 121 AKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAEKL 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             + +T+  H+ N++ K G  + AGL+  A
Sbjct: 181 FISNRTVEGHRKNLLEKTGAKNTAGLVVFA 210


>UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus
           RepID=B2G7N1_LACRJ
          Length = 217

 Score =  135 bits (340), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 85/210 (40%), Gaps = 15/210 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV + +   +   GI  L            T +  +++   + +     +I   S    E
Sbjct: 3   NVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIR-VEQGGIDILIMDLSMPPGE 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122
              GL     +  KFP+ + ++++  + +  +  +++   +  +L  +   E       +
Sbjct: 62  --NGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYILKSSPDSEIVNGLKHV 119

Query: 123 FHQELFLSLNGVRQATD-----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            + E +L  N +    D        N   +     LS  E+E+   ++ GYS  +I++++
Sbjct: 120 INGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQKM 179

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             + KT+ AHK N+  KL +     L++ A
Sbjct: 180 FISTKTVEAHKANISRKLHLHGRVELVQYA 209


>UniRef50_A9BWP0 Two component transcriptional regulator, LuxR family n=1
           Tax=Delftia acidovorans SPH-1 RepID=A9BWP0_DELAS
          Length = 231

 Score =  135 bits (340), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 81/215 (37%), Gaps = 12/215 (5%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
           H +    +V L +       GI               + ++       +    F  ++  
Sbjct: 7   HRKDLNISVLLADDHPGIISGIRHELSSEL-EILLKASVSNSTDLVKKLDEGGFDVLVSD 65

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
           +S    +  +GL+    ++ +FP    +V+   D  A ++ +L       ++SKA  +  
Sbjct: 66  YSMPTGQYGDGLNLFGYISRRFPNLGLVVLTMLDNSA-ILQALGKVSNISIVSKADPVLH 124

Query: 123 FHQELFLSLNGVRQATDRLNNQWY----------INQSRTLSPTEREILRFMSRGYSMTQ 172
               +  +  G    +  ++ +                  LSP E E++R  + G  + +
Sbjct: 125 LVPAIHAAYTGGTYFSPAISERLEKMNAGVMGGEGKSPGVLSPKESEVVRLYAAGLRIDE 184

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           IA +L R+ KTI   K   M KLG+  D  L++ A
Sbjct: 185 IAAKLNRSKKTISTQKVKAMHKLGIERDIDLMKYA 219


>UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM
          Length = 216

 Score =  135 bits (339), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 83/210 (39%), Gaps = 12/210 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  V +++   +   G+  +                      A  ++    V+   S 
Sbjct: 1   MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGGIAMA-QKMRPDVVLLDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST------ 119
                  GL CL  L    P  R +++   +    +    +   +  VL KA+       
Sbjct: 60  PEM---SGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAADDVLYQA 116

Query: 120 -LEIFHQELFLSLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQL 177
              ++  E+++  +  +     L  +   +  R  LS  E+++L  ++ GY+  +IAEQL
Sbjct: 117 VRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++KT+  +K+ +M KL     + L++ A
Sbjct: 177 VISVKTVETYKYRIMEKLNCKKRSDLVKFA 206


>UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406
           RepID=Q11VH7_CYTH3
          Length = 220

 Score =  134 bits (338), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 91/219 (41%), Gaps = 22/219 (10%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK N+ L++   +   GI++  +      + +    +     +A+ ++    VI   + 
Sbjct: 1   MKKINILLVDDHTIVRDGIKATLKDQKNF-HIVGEAANGLDGIEAVKQLKPDVVIMDITM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+     ++ K+P ++ L+++  D E  ++ S+      G L K    + F +
Sbjct: 60  PEM---SGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAY-GYLLKDVDKDEFIK 115

Query: 126 ELFLSLNGVRQATDRLN-----------------NQWYINQSRTLSPTEREILRFMSRGY 168
            +    NG +     ++                    Y N    L+  E+ IL+ ++ G 
Sbjct: 116 AITAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGK 175

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +  +IA+ L  +I+TI  H+ N+M KL V +   L+  A
Sbjct: 176 NNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIA 214


>UniRef50_B1K3F1 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3F1_BURCC
          Length = 246

 Score =  134 bits (338), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 10/214 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +K N+ + +   M   G+  +F            +T        +S      +I  ++  
Sbjct: 31  RKINIVVADSYPMIVQGLRHVFSSVENMRIVAEAHT-LSGMASLLSSCECDVLICDYAFG 89

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST------- 119
                +G+  L  +    P  + +++A+      +   L       V+  +         
Sbjct: 90  DDPGPDGMRMLETIRRNHPNVKIILLAELRDGLSVQRVLKKGVSAFVVKSSDDSLSLPKI 149

Query: 120 -LEIFHQELFLSLNGVRQ-ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
             ++   + ++          D      +  ++  LSP E +++R +SRG ++ +IA +L
Sbjct: 150 VDKVMRGKRYVDPGIAGDMLCDSGRGSDWQARTNLLSPRELDVVRLLSRGMAVGEIAVKL 209

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
            R+ KTI   K N M K GV ++  L++A   +L
Sbjct: 210 SRSRKTISTQKANAMKKFGVKTNVDLVDAVRDML 243


>UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1
           Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR
          Length = 211

 Score =  134 bits (337), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 85/209 (40%), Gaps = 12/209 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  + L +  ++   GI ++     G   +       E+   A+ R+    V+   + 
Sbjct: 1   MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEA-ISAIQRLQPDVVLLDIAM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+     +    P T+ LV++  D    +I     + ++G L K   L    Q
Sbjct: 60  PG---PSGIEVARTIRQFDPNTKILVLSSVD-RPEIIEQALAAGVNGYLLKDFVLAELLQ 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLK 178
            L + L+G R  + ++      + +         L+  + EILR ++ G +  +IA  L 
Sbjct: 116 ALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLG 175

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + KT+  H+  +M ++GV    GL   A
Sbjct: 176 ISPKTVEFHRSRLMERIGVHDVTGLTRFA 204


>UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2
           Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA
          Length = 212

 Score =  133 bits (336), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 82/206 (39%), Gaps = 14/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +  V+   G+  +          +     +E+    +        +   S      
Sbjct: 4   VLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHCP-DVAVVDISMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL  ++ L  + P    L++   + E  ++ ++    + G ++K S  E     +   
Sbjct: 60  IDGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAM-GYMTKKSAPEQLVTAIRKL 118

Query: 131 LNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            +G R  T+       +  SR         +LS  E ++LR ++ G++  +IA+    ++
Sbjct: 119 HSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHISV 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  ++  ++ KL + ++A +   A
Sbjct: 179 KTVDTYRARLLKKLNLRNNADISRFA 204


>UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter
           piscolens W5455 RepID=D1Y661_9BACT
          Length = 216

 Score =  133 bits (335), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 78/208 (37%), Gaps = 16/208 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +   M   G+  L  K  G           E+   A  R+     +   +     R
Sbjct: 5   VLLADDHEMFLEGLRELLGKADGIELAGLARDGAEA-VAAAERLQPDVALMDMTMP---R 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+    ++A   P T+ LV++    +  ++ SL      G + K  + +     +   
Sbjct: 61  LNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGA-RGYVLKECSSQELCLAIQTV 119

Query: 131 LNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
            NG    T            RL           LS  E ++L+ + +G +  QIAEQL  
Sbjct: 120 ANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQLSI 179

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +  T+  H+ +++ KLG +S A L   A
Sbjct: 180 SKNTVDTHRRHILDKLGCNSMAELTRYA 207


>UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A5E6_GEMAT
          Length = 213

 Score =  133 bits (335), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 8/204 (3%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  V L++   +   G+  L R   G    +    + E+    +       VI   +  
Sbjct: 3   TRTRVVLVDDHSLVRRGLAVLLR-LDGRHDVVGEAGTGEAAVPLIEAERPDLVILDLNMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                +GL  L  +  K   TR LV++  D E  L+G    +  DG L K S  +     
Sbjct: 62  G---IDGLETLRRVRAKGLTTRVLVLSMHD-ETHLVGQALSAGADGYLLKDSMDDELFFA 117

Query: 127 LFLSLNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           +   L G R      DR   Q    +  +L+  ERE+L+ ++ G + + +AE L  +  T
Sbjct: 118 IESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHT 177

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
              H+ N+M KL V +   L+  A
Sbjct: 178 ATRHRANLMQKLNVHNQVELVRIA 201


>UniRef50_Q1LG72 Two component transcriptional regulator, LuxR family n=3
           Tax=Cupriavidus RepID=Q1LG72_RALME
          Length = 217

 Score =  133 bits (335), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 80/207 (38%), Gaps = 11/207 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69
           VAL +   +  + +    ++  G        T+     DA+++      +  FS      
Sbjct: 8   VALADDHPLVVVALRDCLQRTPGFQVTCEC-TNGSELVDALTQNPVDVAVTDFSMGHGDT 66

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF- 128
             +G + L +L  + P TR +V++       ++           +SK   L+   +    
Sbjct: 67  SLDGFNLLRKLHRRHPDTRIVVVS-AQTNPGVVSRAMKLGARAFVSKEDELDEIVRACIH 125

Query: 129 -------LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
                       +R   D          +  L+  E +++R  ++G+ +T+IA +L R++
Sbjct: 126 VTVSNGHFYSPSIRAVLDSATAAATAAPATDLTLRELDVVRLYAQGFQLTEIANKLGRSV 185

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208
            TI + K   M KL V ++  L+  A 
Sbjct: 186 STISSQKTVAMRKLSVQTNTDLIRYAY 212


>UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA
          Length = 209

 Score =  133 bits (334), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 81/208 (38%), Gaps = 21/208 (10%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + E   +   G+ +L      +   +      +   +    ++   V+   S      
Sbjct: 5   ILIAEDQQLVRQGLVALL--AVDDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPE--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+     +    P+ R LV+   + E R+  +L+       L K       H EL  +
Sbjct: 60  LDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLG-----HGELMAA 114

Query: 131 LNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +N V      L      +  +           +L+  ERE+L+ ++RG+   +IA++L  
Sbjct: 115 INAVCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGI 174

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            IKT+  H+  +M KL + + A L   A
Sbjct: 175 AIKTVETHRTKIMQKLDLHNSAELAAYA 202


>UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1
           Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD
          Length = 212

 Score =  133 bits (334), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 13/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +   +   G+ SL  K A            E+ + A+        +   S      
Sbjct: 4   VMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALETRP-QVAVIDISMPE--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  +  +  K P  + LV+   + +  +I  +       +L  +++ E+      L+
Sbjct: 60  LNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGASGYLLKDSASEELIDAVKALA 119

Query: 131 LNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
                 +    +         ++ + +  + L+  ERE+   +  G +   IA  L  ++
Sbjct: 120 TGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLDISV 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT   H+  V+ KLGVS+ A L+  A
Sbjct: 180 KTAENHRGKVLDKLGVSNTAELVRYA 205


>UniRef50_A2WHU0 Response regulator n=2 Tax=Burkholderia cepacia complex
           RepID=A2WHU0_9BURK
          Length = 204

 Score =  133 bits (334), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 10/182 (5%)

Query: 38  LHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDI 97
           + T  +     + + R     ++  ++    E  +GLS L  L  +FP  + +V+    I
Sbjct: 2   IGTARNSTELIELLERSPCDVLMTDYAMPGGEYGDGLSMLALLRRRFPLLKIMVLT-AGI 60

Query: 98  EARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSR------ 151
              ++  ++   +  VL+K   +      +     G    +    N  +   S       
Sbjct: 61  SPAIVSEIARIGIRSVLNKVDDIGHLITAIHTVFAGAAYYSPGAQNLAHAAASEYMPDTM 120

Query: 152 ---TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
              +L+  E E+LR    G S+ +IA Q++R  +TI A K   M KLGV  D  L  AA 
Sbjct: 121 SGTSLTKREAEVLRLYVAGMSINEIATQMRRTKQTISAQKQRAMKKLGVERDVDLFRAAY 180

Query: 209 IL 210
            +
Sbjct: 181 EM 182


>UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29
           Tax=Alphaproteobacteria RepID=Q1GIA7_SILST
          Length = 233

 Score =  132 bits (333), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 16/204 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   M + GI+S+   +          + +E+   A + +    ++   +      
Sbjct: 26  VLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARAEALVP-DVILMDLNMP---D 81

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLS-------KASTLEIF 123
             GLS    +  + P  R L+++  D    +  +LS   +  VL        K +   + 
Sbjct: 82  VGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAVGYVLKDVQPEEIKTAIDAVM 141

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             E +L        + +            L+  E+ IL  +++G S  ++A+ L  +++T
Sbjct: 142 RGEQYLCTGAAGSLSPQSQTSR-----EALTGREQTILLELAQGKSNKEVAQALDISVRT 196

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  H+ N+  KLG+SS AGL   A
Sbjct: 197 VETHRKNIKRKLGISSTAGLTRYA 220


>UniRef50_A5FAW2 Two component transcriptional regulator, LuxR family n=2
           Tax=Flavobacterium RepID=A5FAW2_FLAJ1
          Length = 219

 Score =  132 bits (333), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 90/217 (41%), Gaps = 21/217 (9%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  + L +   +   G+ +L +  +     + +  +  +  D + +     ++   S 
Sbjct: 1   MTKIKIHLADDHQVLIDGLTNLLQTVSNFE-IVGSSLNGVTVYDDVIQDQADILVLDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
               +++G+  L E   K    + ++++  D   ++I  +      G L+K    E   +
Sbjct: 60  P---QKDGIEVLKEFNQKGLPCKVIILSSYDD-LKIIKEVMKLGAKGYLTKKCAGENMIE 115

Query: 126 ELFLSLNGV---------------RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSM 170
            +     G                 Q   +LN   YI ++  LSP E EI+  +   YS 
Sbjct: 116 AIEAVYEGQEYFSDAVREKIFSMFSQNNPKLNKNVYI-ENPILSPREIEIVTLICLEYSG 174

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +I+E+L  ++ T+  H+ N+M KL + +  GL++ A
Sbjct: 175 KEISEKLFISVNTVETHRKNIMKKLNIKNTIGLVKYA 211


>UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce
           56' RepID=A9FM25_SORC5
          Length = 233

 Score =  132 bits (333), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M  +   K ++ LI+   +   G              +    +        +      V+
Sbjct: 14  MAETPASKLHIYLIDDHPVVREGFARALSDEPDMV-VVGQAGTAADALRETASCKPDVVL 72

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +      R+G+  L  L  + P+ + LV++  D E R+  +L      G L K S L
Sbjct: 73  VDLNIP---DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGA-QGYLVKTSKL 128

Query: 121 EIFHQELFLSLNGVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSM 170
           E   + +     G    +           R            L+P ER++LR ++ G S 
Sbjct: 129 EEVIEGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVST 188

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + A +L  + KT+  H+  + +KLG  S   L   A
Sbjct: 189 RETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIA 225


>UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92
           Tax=Burkholderiales RepID=Q3JFS6_BURP1
          Length = 282

 Score =  132 bits (332), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 79/205 (38%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+  + +  +G       + S  +    +       ++   S      
Sbjct: 71  VLIADDHALVRDGLRHILQNASGYEVAGEAFDSATT-IALVRSTPAQVLVLDLSMPG--- 126

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
           R G+  + ++  + P  R LV+     +   + +       G L+K S        +   
Sbjct: 127 RNGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGA-SGYLTKESASSELVGAVTKV 185

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                ++SL    +    LN          LS  E ++ R ++ G ++TQIA++L  + K
Sbjct: 186 ASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADELCVSAK 245

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  +K  ++ K+ +  +A L+  A
Sbjct: 246 TVSTYKTRILEKMQMPHEAALVRYA 270


>UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteria RepID=Q1J0X7_DEIGD
          Length = 228

 Score =  132 bits (332), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 76/205 (37%), Gaps = 12/205 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + L++   +   G   L    A         + +E+   A  ++    ++   S     
Sbjct: 16  TLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKA-RQLMPDVILMDVSMPGM- 73

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------ 123
              G+     +  + P    LV+   D +A +   L       +L  AS  E+       
Sbjct: 74  --NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAAGYLLKNASEDELLGAVRAV 131

Query: 124 -HQELFLSLNGVRQATDRLN-NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
              E  L     R+  +R + +Q        LSP E E+LR  + G +  +IA  L  + 
Sbjct: 132 AAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIARDLDISP 191

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206
           +T++ H  N+ SKLGV S    +  
Sbjct: 192 RTVQVHLANIFSKLGVGSRTEAVLY 216


>UniRef50_C3K5C3 Putative response regulator, receiver domain n=1 Tax=Pseudomonas
           fluorescens SBW25 RepID=C3K5C3_PSEFS
          Length = 211

 Score =  132 bits (331), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 81/203 (39%), Gaps = 8/203 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +  IG + +  +  G    +      +     + R     ++  F+   +++
Sbjct: 4   VIIADDHPIVRIG-QKVVIEANGKCKVVGEADGPDQLLALVQRTPCDVLVTDFAMPGNQQ 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G   L  L  + P    +++      A L  S        +++K+++       +   
Sbjct: 63  ADGYGLLGLLHRQHPDLPVILVTMFANVATLRSS-FSHGARAIVAKSASARELPLAIKAV 121

Query: 131 LNGVRQATDRLNNQWY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             G    ++ L  Q              LS  ERE++R ++ G +++QIA ++ R+I TI
Sbjct: 122 CEGHTFVSECLRLQLEEAGVGDQQGMPQLSGKEREVVRMLASGMTVSQIAARVNRSISTI 181

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
              K   MS+L +S+D  L   A
Sbjct: 182 SKQKSTAMSRLCISTDVDLFAYA 204


>UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746AEC
          Length = 222

 Score =  132 bits (331), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 79/213 (37%), Gaps = 16/213 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  V L++   M   G   +              ++ E+    + ++    V+   + 
Sbjct: 7   VSKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEALG-LLEQVRPDLVVTDLTL 65

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                R GL  + ++   FP T+ LV +  D       +L      G + K +    F  
Sbjct: 66  ---GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGA-RGYVMKDADGPTFLT 121

Query: 126 ELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
            +   L G R  + RL             +   +    LS  E E+ R    G +  +IA
Sbjct: 122 AVRTVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEIA 181

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            QL  + KT+  H+ ++  KLG S+ A ++  A
Sbjct: 182 AQLNLSPKTVSVHRDHIKEKLGFSTSAEMIRQA 214


>UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30
           Tax=Bacillales RepID=B7GL14_ANOFW
          Length = 260

 Score =  131 bits (330), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 24/220 (10%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + LI+   +   GI+ +                 E+    + R     VI   +   
Sbjct: 36  KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEAL-ALVERYKPDVVIMDINMP- 93

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G+    +L   +P T+ ++++  D E+ ++ +L    +  +L +     +     
Sbjct: 94  --HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAMGYLLKEMDADALIEAVR 151

Query: 128 FLSLNGVRQ--------------------ATDRLNNQWYINQSRTLSPTEREILRFMSRG 167
            ++  G                             NQ        L+  E E+L+ ++ G
Sbjct: 152 VVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLADG 211

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            S   IA+ L  + KT++ H  N++ KL V+     +  A
Sbjct: 212 KSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVA 251


>UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A9U5_GEMAT
          Length = 223

 Score =  131 bits (330), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 80/207 (38%), Gaps = 15/207 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+  +     G          + +   A+  +    V+   +      
Sbjct: 13  VLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHVP-DVVVLDITMPEE-- 69

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
             GL     L    P TR L+++  D    +   +      G L K S  E     +   
Sbjct: 70  -SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRI-GTHGYLLKDSAGEELRAAIRAV 127

Query: 128 -----FLSLNGVRQAT--DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                F S   VR+ T  + ++      Q   L+P ER++L  ++RG +   IA +L  +
Sbjct: 128 HAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIAAELGIS 187

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +T+ AH+ ++M KL + S AGL   A
Sbjct: 188 RRTVEAHRESLMRKLQIHSVAGLTRFA 214


>UniRef50_B2JCS8 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia phymatum STM815 RepID=B2JCS8_BURP8
          Length = 217

 Score =  131 bits (330), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 90/204 (44%), Gaps = 12/204 (5%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM--RSER 70
           L +      +GI +      G    +   TS  S    M + S   ++   +      + 
Sbjct: 2   LADDHPFVLLGIRATLIAHGGFT-IVGEATSPSSLVQLMEKASCDVLVTDLTMPDASGDA 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
            +GL  +  +   +P    +V+      A ++ S+    + G+L+K+ +++     +   
Sbjct: 61  DDGLRLIRRIRSGWPEVHIVVLTSL-TNAAILRSIMSDGVIGMLNKSESMDELAAAIRAA 119

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                ++S + ++   +       ++  R LSP + E++R   RG S+++IA  L R+++
Sbjct: 120 GAGRSYVSRSILQTLAEASGEPLGMSPMRHLSPRQSEVIRMFVRGKSISEIARDLGRDVR 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           T+   K + M+KLGVS+D GL   
Sbjct: 180 TVSRQKRDAMAKLGVSNDPGLFAF 203


>UniRef50_A9AIC6 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderia cepacia complex RepID=A9AIC6_BURM1
          Length = 229

 Score =  131 bits (329), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 84/207 (40%), Gaps = 10/207 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            VA+ +   +    +  LF+      +  H      +  ++++R+    VI  +S  R +
Sbjct: 20  TVAIADDHPVVVSLLVQLFQADPSF-HVEHCCNEGSALIESLARVPTDIVIVDYSMSRGD 78

Query: 70  R-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL-EIFHQEL 127
           R  +G + L +L    P+  R++         +  +     +  ++SK   + E+     
Sbjct: 79  RPVDGFALLRKLREVAPKAGRVLFTM-QRNPTVFAAAMRLGVAAIVSKEDEVAELLRACR 137

Query: 128 FLSLNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           ++   G    +  +            + +  L+  E +++R    G+S+  IA+QL R++
Sbjct: 138 YIQDGGACYLSPTVRTIVDQAGTVLRDNAPPLTQKEIDVVRLFVSGHSLADIAKQLGRSV 197

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208
            T+   K+  M KL   ++  L+  A 
Sbjct: 198 STVSTQKYTAMRKLRADTNVHLIRYAY 224


>UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2
           Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY
          Length = 210

 Score =  131 bits (329), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 85/198 (42%), Gaps = 5/198 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +ALI+   +   GI +L              +  E+F D + R     ++     +    
Sbjct: 8   IALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAF-DLLQRTPVDILLMD---VGLRD 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL    +L  ++P  + L+++  D +  +  SL+      VL +A + EI      ++
Sbjct: 64  INGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSLAVGASGYVLKEAPSREIVAAIEAIA 123

Query: 131 LNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
             G   + D          S   L+P ERE+L  +++G +   +A  L+ +++T+  H+ 
Sbjct: 124 AGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVETHRL 183

Query: 190 NVMSKLGVSSDAGLLEAA 207
           ++  KL +   A LL+ A
Sbjct: 184 SIRRKLAIDKPADLLKHA 201


>UniRef50_A3HVN1 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1
           RepID=A3HVN1_9SPHI
          Length = 208

 Score =  131 bits (329), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 85/202 (42%), Gaps = 11/202 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +AL +   + + GIESL  ++  +      Y + +   D++       ++   +      
Sbjct: 4   IALADDHKLFAKGIESLLDEY-DDLLITGIYPNGKELIDSLKMDLPDVILTDLNMP---V 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--ELF 128
            +G   L      FP+ + +V++  D E      +       +L  A   E+ +   E++
Sbjct: 60  LDGFGVLKSSKKAFPKIKVIVLSMYDDEKIYKKCMKEGADAFILKDADPDELVYTIHEVY 119

Query: 129 --LSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               +   ++   + N   + +  R    LS  E +I++ +  G    +IA+ L  +++T
Sbjct: 120 DGRHIANFQRVIQQANQSSFYDAFREKFKLSRREVQIIKLIKDGMQNKEIADDLSLSVQT 179

Query: 184 IRAHKFNVMSKLGVSSDAGLLE 205
           I  H+ N+ SKL VSS   L+ 
Sbjct: 180 IETHRKNIHSKLHVSSRIELVN 201


>UniRef50_A9IRH9 Probable two-component response regulator n=5 Tax=Bordetella
           RepID=A9IRH9_BORPD
          Length = 258

 Score =  131 bits (329), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 9/202 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +A+++   + ++G+ +  R        +H  T+ E+   ++        +  F   R   
Sbjct: 49  IAILDDHPVITLGVAAYLRSQPDFD-IVHAETTSEALVRSLKHQPCDVAVVDFYLPRQP- 106

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+  +  L  + P    +  +          +       G L K++++ +  + +  +
Sbjct: 107 WDGMDFIRRLRRQHPHMAIITFSAGAPAETEYAAFRAGA-HGYLPKSASMPVLVEVIRAA 165

Query: 131 LNGVRQA------TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
            +  R           L+     +    L+  E E+LR +++G S+TQ+A +L R+ KTI
Sbjct: 166 HSRGRPGDFISYKNGTLHTAAPRHPDTRLTTAEIEVLRQIAQGLSVTQLAARLLRSKKTI 225

Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206
             HK   M KLG++ D  L   
Sbjct: 226 STHKRRAMKKLGLADDLALALY 247


>UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8
           Tax=Bacteria RepID=A5G586_GEOUR
          Length = 226

 Score =  131 bits (329), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 16/208 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G++++                +E+ + A   +    V+   +      
Sbjct: 15  VLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELLP-DVVVMDLTMPEM-- 71

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  + ++    P  R LV++     A ++ +       G L K   +E     +   
Sbjct: 72  -NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGAT-GYLLKDCAVEELVGAIHTV 129

Query: 131 LNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQIAEQLKR 179
            +G      ++ +    + ++            LS  ERE+L+ ++ G S  +IA     
Sbjct: 130 ASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTFGV 189

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +IKT+   + +VM KL + + A L + A
Sbjct: 190 SIKTVAVQRMSVMKKLNLFNVADLTKYA 217


>UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3
           Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE
          Length = 210

 Score =  130 bits (328), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 81/204 (39%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   M   G+  +  +       +    +    Q+ +    +  ++   S      
Sbjct: 4   ILLADDHAMFRSGLRRIL-EAEFPGASVGEAATIADVQERLGAQPWDVLLLDISMAGQ-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
              L+ L  L  + PR   +V++       +I +L       +  + +  E       + 
Sbjct: 61  -NSLNALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGASAYLTKERAPEELIRAIRSVL 119

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               ++  +   Q  D L      +    LSP E EI   ++   S+++IAE+L+ ++KT
Sbjct: 120 AGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLSVKT 179

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  ++  ++ K+ + S+A L++ A
Sbjct: 180 VSTYRGRILEKMALRSNAELMQYA 203


>UniRef50_C3BGJ6 Two component transcriptional regulator, LuxR n=5 Tax=Firmicutes
           RepID=C3BGJ6_9BACI
          Length = 201

 Score =  130 bits (328), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 12/195 (6%)

Query: 21  SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80
             G++ L +K              E+ +     +    +I   S     R +G+  LTE+
Sbjct: 2   RSGLKLLLQKRPSLKVVGEASDGLEALRLYDI-LRPDILILDISLP---RLDGIQVLTEI 57

Query: 81  AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQELFLSLNG 133
            +++ + + +V+   + E  +   ++      V   A   E       +    L+L    
Sbjct: 58  KLRYEQAKVIVLTMHEDEDYVTLIMNAGASGYVPKAAVDEELYTAIDSVMDGYLYLRPKE 117

Query: 134 VRQATDRLNNQ-WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVM 192
           +     RL N+    N    LSP ERE+L+F+ +G+S+++IA++L  +IKT+  HK  ++
Sbjct: 118 ISTMLKRLQNETESRNPYVILSPREREVLQFLVKGFSLSEIAQELTISIKTVDTHKTRML 177

Query: 193 SKLGVSSDAGLLEAA 207
           +KL +S  + L++ A
Sbjct: 178 NKLNLSKKSELVQYA 192


>UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4
           Tax=Leptospira RepID=Q04VJ6_LEPBJ
          Length = 221

 Score =  130 bits (328), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 77/212 (36%), Gaps = 21/212 (9%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G++ +     G           E   D + +++   VI   S      
Sbjct: 8   IFLVDDHAILREGLKMILS---GQFEICGESGDAEKALDQIGKLNPDLVITDISMPG--- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
             G+  +  L  ++P  R ++++  D    +   L       VL   +  ++        
Sbjct: 62  LSGIDLVKNLRKQYPNIRTIILSRHDNREYVQKLLELGINGYVLKDDAGNDLLRAIEAVH 121

Query: 125 -QELFLSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
             E +LS           V        NQ        LS  EREIL+ ++ G S   I +
Sbjct: 122 KGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGNSNESIGK 181

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            L  +  T++ H+ N+M KL +   A L+  A
Sbjct: 182 ILGISPATVKVHRANIMKKLNLHKVADLVMYA 213


>UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32
           Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ
          Length = 231

 Score =  130 bits (328), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAA 58
           HS      V LI+   +   G+         + Y +      E+    + R         
Sbjct: 13  HSIDAPARVLLIDDHALVRDGMRMHLT-LQPDLYVVGEADGGEAALAWLERAGARERPDL 71

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
           VI            G++    L  ++P    LV++  D       ++      G + K +
Sbjct: 72  VITDIGMRGMG---GIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGA-RGYVLKDA 127

Query: 119 TLEIFHQELFLSLNG-----VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
             +     +   L G      R A               L+  ER+IL  + RG +  +I
Sbjct: 128 PADELMAAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEI 187

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           A QL  +++T+  H+ N+  KLG+   AGL++ A
Sbjct: 188 ATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYA 221


>UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601
           RepID=C2C4B6_LISGR
          Length = 214

 Score =  130 bits (327), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +    ++ +                 E+F    S      V+   S    E   
Sbjct: 5   IADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFLFIESNRP-DIVLMDLSMPPGE--N 61

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           GL     +   FP T+ +++   D EA +  +L      G + K S+ E+    +   + 
Sbjct: 62  GLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGA-QGYIMKNSSEELLLDAIRSVMG 120

Query: 133 GV-----------RQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           G            +Q           N    LS  E+EIL  ++ GY   +IAE+L  + 
Sbjct: 121 GQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERLFISA 180

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206
           KT+  HK ++M KL +   + LL  
Sbjct: 181 KTVEVHKSHIMKKLEMKKFSDLLRF 205


>UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria
           RepID=Q3Z7M1_DEHE1
          Length = 232

 Score =  130 bits (327), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 85/209 (40%), Gaps = 15/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ L +   +   G+++L    A            E+  + +  +    ++         
Sbjct: 3   SIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEA-VNLVESLQPGVLVTDLMM---G 58

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127
              G+    ++  + P+T  ++++    EA +  +L       VL  +++ E+       
Sbjct: 59  GMSGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVLKDSTSEELVRSVREA 118

Query: 128 ---------FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
                     LS   +    ++      ++   TL+  ERE+L  +++G++  +IAE+L 
Sbjct: 119 VQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAERLF 178

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + +T+  H+ N+M KL + +   LL  A
Sbjct: 179 ISPRTVEVHRANMMRKLDLRNQTQLLRYA 207


>UniRef50_B4STE5 Two component transcriptional regulator, LuxR family n=3
           Tax=Stenotrophomonas RepID=B4STE5_STRM5
          Length = 208

 Score =  130 bits (326), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 75/202 (37%), Gaps = 10/202 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   GI  + +    +   + +          +      AV+   S      
Sbjct: 5   IIIADDHPVVLHGIRVVLQTHLMD--VVGSACDGAELLQLVDNNDCDAVLTDLSMPG-AG 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G   +  L  + P    +V+        L+  L    + G++ K +      Q L  +
Sbjct: 62  PDGPELIDALRARHPGLPVVVLTGARH-PGLLDGLLREGISGLVDKCADFTELPQALSAA 120

Query: 131 LNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           L G    + +L +        +  +   LS  E+E+L  ++ G S+  +AE+  R+ KTI
Sbjct: 121 LAGQVFVSQQLRHHLQARDLLFPREPAPLSAREQEVLDLLAAGLSVNAVAERCGRSPKTI 180

Query: 185 RAHKFNVMSKLGVSSDAGLLEA 206
              K     KLG+ ++  L + 
Sbjct: 181 SRQKAEAKRKLGLQNNQELFDY 202


>UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1
           Tax=Natranaerobius thermophilus JW/NM-WN-LF
           RepID=B2A6W2_NATTJ
          Length = 215

 Score =  130 bits (326), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 83/208 (39%), Gaps = 15/208 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V +++   +   G+  L              T++E+      +     V+   S     
Sbjct: 4   SVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKCP-DVVLLDLSLP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ--EL 127
            ++G   + EL       R L +   + EA     +       +L KA+  E+      +
Sbjct: 60  DKQGHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAADDELISAIRSV 118

Query: 128 FLSLNGVRQATDRLNNQWYINQSRT--------LSPTEREILRFMSRGYSMTQIAEQLKR 179
           +     V +   +L   +Y N  +         LS  E+E+L+ ++ GY+  +IAE+L  
Sbjct: 119 YQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKLYI 178

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +IKT+  H   +  KLG++  + L+  A
Sbjct: 179 SIKTVETHIARIKEKLGLNRRSELVRYA 206


>UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1
           Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF
          Length = 212

 Score =  129 bits (325), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 82/207 (39%), Gaps = 16/207 (7%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +   G+ +L     G          +E+ + A   +    V+   +        
Sbjct: 2   VADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLAQE-LRPDVVVLDVTMPE---LN 57

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           GL    E+    P T  +++   D +  L  +L       VL + +   +      LS +
Sbjct: 58  GLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGARGYVLKEDAARHLVDAIDALSKH 117

Query: 133 GVR---QATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                 +A +R  N     ++          +L+  ERE+LR +++G S  ++A QL  +
Sbjct: 118 APYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLSIS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            KT+  H+ NVM KLG SS   L+  A
Sbjct: 178 AKTVETHRANVMRKLGASSIVDLVHYA 204


>UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFI8_DESAH
          Length = 220

 Score =  129 bits (325), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 17/208 (8%)

Query: 11  VALIEKCVMSSIGIESLF-RKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           + + +   +   G+  L  RK    P+      +         +     VI   +     
Sbjct: 5   ILIADDHAIVREGLRVLLERKGLEVPWMAE---NGRQAVCLAVKFKPDIVIMDITMPNM- 60

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------ 123
              G     ++    PRTR + ++       +    +   +  VL  ++  E+F      
Sbjct: 61  --NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVLKDSAFAELFDAIQAV 118

Query: 124 -HQELFLSLNGVRQATDRLNN---QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
              + ++S +  +   D   +            +SP ERE+L+ ++ G    QIAE+L  
Sbjct: 119 GRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLFV 178

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +IKT+ AH+ N+M+KL +SS AGL   A
Sbjct: 179 SIKTVEAHRRNIMNKLMISSVAGLTRFA 206


>UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4
           Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM
          Length = 223

 Score =  129 bits (324), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 85/218 (38%), Gaps = 17/218 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K+ V +++   +   G++SL  + A            E+   A   +    V    S 
Sbjct: 1   MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEALALAQE-LKPDLVTMDVSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-- 123
                  G+  +  +    P TR L+++       +  +        V+ + +T  +   
Sbjct: 60  P---DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQG 116

Query: 124 -----HQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172
                  E F+     +    +L      +Q+        L+P E+++LR ++ G S  Q
Sbjct: 117 FDALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQ 176

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           IA  ++ + KT+  H+ N+M KL V S   L++ A  L
Sbjct: 177 IAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARL 214


>UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A2L6_9BACT
          Length = 240

 Score =  128 bits (323), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 7/200 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            VA+ +   +   GIE+L R      Y +   ++ +  +  + R     ++   S     
Sbjct: 22  TVAIADDHHVVRQGIEALLRMCPDMEY-VGGASTVDEARQLVHRTRPDVLVSDLSMPGG- 79

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+  L  L  + P TR +V+      A  +     S     ++K    +     +  
Sbjct: 80  --SGVGFLRNLRRECPDTRIVVLTMH-ATALAMQDAFDSGAHAFVAKDDAFDTLVSIIRR 136

Query: 130 SLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
             +G      R   +      ++  L+P ERE+L+ +++G S  +I  QL  + KT+  +
Sbjct: 137 VHSGEEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFLSPKTVEVY 196

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
           +  +M K  V+    L+  A
Sbjct: 197 RGRLMKKFNVTKGTELIHHA 216


>UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3
           Tax=Betaproteobacteria RepID=Q2YB36_NITMU
          Length = 217

 Score =  128 bits (323), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  V L++   M   G+  L                 E+     +      V+   S  
Sbjct: 4   SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL- 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
             +   G   +  +    P    LV++  D       +L      G + K    E+    
Sbjct: 63  --KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGA-RGYVMKQEPGEVLVTA 119

Query: 127 LFLSLNGVRQATDRLNNQWYINQS----------RTLSPTEREILRFMSRGYSMTQIAEQ 176
           +   L G    +  ++ +     +           +L+P+E E+L  +  G+S  +IA+ 
Sbjct: 120 IHEVLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKL 179

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           L R+IKTI  H+FN+ +KL +   A L+  A   
Sbjct: 180 LSRSIKTIETHRFNIRTKLNLKDGADLIRYATHW 213


>UniRef50_Q4KAJ3 DNA-binding response regulator, LuxR family n=2 Tax=Proteobacteria
           RepID=Q4KAJ3_PSEF5
          Length = 217

 Score =  128 bits (322), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 10/210 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  VAL +   +    +  L +K           T     Q          VI  +  
Sbjct: 1   MKKIRVALADDHPLVLAAVSDLLKKTRQYEVVAAVTTPSALVQQLSDDPRIDVVITDYFM 60

Query: 66  MRSER-REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF- 123
                  +G+  +T L   FPR + LV+        ++ +L    +  VL K   +    
Sbjct: 61  EGDPTFGDGIRLVTYLIRHFPRVQVLVLTMMS-NPMIVAALYDIGVRSVLPKRHDMSELL 119

Query: 124 -------HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
                     +    + V+   +    +   +   +L+P E E+LR   RG SM QIA  
Sbjct: 120 SALENVRQGRIHHPPSLVQNELNSSPLRSMADGLSSLTPKEYEVLRHFVRGESMMQIAAN 179

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           LKR++KT+ A K + + KL + SD  L+  
Sbjct: 180 LKRSVKTVSAQKISAIRKLNLDSDQALVAF 209


>UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii
           ATCC 27126 RepID=UPI0001AEC81D
          Length = 209

 Score =  128 bits (322), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +  V+   G+  +      +   +       +   A+ ++S   ++   S     R
Sbjct: 5   VVLADDHVLMRQGVSQML-NANPDISVVGECDDGVALIAAVLKLSPDVILMDISMP---R 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  + ++  +    + LV++    E   I ++  +   G + K S+ E   + +   
Sbjct: 61  MSGLVAIDKILSQRSDAKILVLSMH-NEVEYIEAMRDAGAKGYILKESSGESLVEAIKKV 119

Query: 131 LNGVRQATDRLNN------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
                   D L        Q +++    L+  ERE+   +  G +  +IAE L  ++KT 
Sbjct: 120 AANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLKTA 179

Query: 185 RAHKFNVMSKLGVSSDAGLLEAAD 208
             H+ N+  KL +SS A L+  A 
Sbjct: 180 ENHRSNIYKKLNLSSSAELIRMAG 203


>UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1
           Tax=Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1 RepID=C7RMN3_9PROT
          Length = 213

 Score =  128 bits (321), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +K  + L++   +   G+  L  +            + E     + +  F   +      
Sbjct: 4   RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEA-ENAEQAISMIRQNEFDVALVDIGLP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL  L ++  + PR   L+++    E   + +L      G L+K S        
Sbjct: 63  GKG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGA-SGYLTKNSPPGTLLAA 118

Query: 127 LFLSLNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +     G R  +  L  Q  +       + S  LS  E E+LR ++ G S+TQIAE L  
Sbjct: 119 IRKVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHL 178

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + KT+  ++  ++ K G+ S+A L   A
Sbjct: 179 SPKTVTTYRARIVEKTGLHSNAELTRYA 206


>UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A9E4_9BACT
          Length = 227

 Score =  128 bits (321), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 5/198 (2%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V +++   +   GI SL R            +++E+F+  + + +   V+   S     
Sbjct: 5   SVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAFE-LVKQHNPDIVVADLSMPG-- 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  + ++      TR +++        +  + S      VL K+   E     +  
Sbjct: 62  -VTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVL-KSDAFEDLVDIIHR 119

Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
              G    T +    +    + TLSP E+++L  +S G S  +I+ +L  + KT+  H+ 
Sbjct: 120 VHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVETHRS 179

Query: 190 NVMSKLGVSSDAGLLEAA 207
            +M KL V+    L+  A
Sbjct: 180 RIMQKLNVTKATELVREA 197


>UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1
           Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3
          Length = 215

 Score =  128 bits (321), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 14/215 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK ++ + +   +   GI+SL +        +   T  +     +  +    V+   + 
Sbjct: 2   MKKISIIIADDHTLIRDGIKSLLQSVDEFE-VVGEATDGDELIQFIDTLDPEIVVLDITM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124
               ++ G+  +TE+     R + +V++  D    ++ S+    L  +L      EI   
Sbjct: 61  P---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALSYLLKNTDHEEIIKA 117

Query: 125 ------QELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAE 175
                  + + S +      + L N   +  S    TL+  E E+L+ +S G S   IA+
Sbjct: 118 VKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIAD 177

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           +L  +++T+  H+ N+M KL V + A L++ A  L
Sbjct: 178 KLFISVRTVETHRINLMKKLDVHNSAELIKKAMDL 212


>UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales
           RepID=D2BDI1_STRRD
          Length = 227

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 73/204 (35%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G+ +L  +  G          +E+    +  ++   V+          
Sbjct: 21  VLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDGEEA-IALVLSLNPDVVVMDLVMPG--- 76

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
             G+     L  + P    LV+   + +A +  +L       VL  A   +       + 
Sbjct: 77  VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGARGYVLKGADGNDFIAAVRAVA 136

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             E        R+    L           L+  EREIL  ++ G S  +IA +L  + KT
Sbjct: 137 RGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEIARRLFLSQKT 196

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           ++ H  ++ +KL V+     +  A
Sbjct: 197 VKNHLTSIFAKLQVADRTQAVVRA 220


>UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderiales RepID=Q12FM5_POLSJ
          Length = 224

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 83/216 (38%), Gaps = 13/216 (6%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           R +K  + +++   +   G+        G+        S E     ++  + A  I   S
Sbjct: 10  RQEKTRIMMVDDHPLVREGMARFL-NLQGDLDLCCEAGSVEEALAVVADCNPALAIIDIS 68

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----- 119
                   GL  +  L  ++P    L I+  D       +L       ++ K +T     
Sbjct: 69  LNGE---SGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILL 125

Query: 120 --LEIFHQELFLSLNGVRQATDRL--NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               +   +++LS     + + RL        +    LS  E EIL  +  G+   Q+A+
Sbjct: 126 AVRRVLAGDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVAD 185

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           +L R+IKTI  H+ ++  KL + S A L+  A   L
Sbjct: 186 KLNRSIKTIETHRASLKEKLQLKSGADLVRFAIQWL 221


>UniRef50_B2JCS9 Two component transcriptional regulator, LuxR family n=7
           Tax=Burkholderia RepID=B2JCS9_BURP8
          Length = 236

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +  + +E+L   F           S E F +A  R+    V+           +
Sbjct: 15  IADDHPLVLLAMENLMSGFPNIEIVGKATDSSELFAEA-QRVKCELVVMDLYMPGGLHGD 73

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH-------- 124
           G+  + +   + P    +V+   +  A  +  +    +  V+SK   +++ H        
Sbjct: 74  GVEMVRQFKERHPDVVVVVLTM-ETSADALQKVIALGVGAVVSKRDRIDLIHVAIITALA 132

Query: 125 QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           +E ++         D   ++      + LS  E E+L   + G  +T+IA +L R++KTI
Sbjct: 133 RECYVGPAIRALLADATLSRRIDYVRQVLSRRELEVLTHYATGRGVTEIAMRLGRSVKTI 192

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
            A K   M KL + SDA L   A
Sbjct: 193 SAQKCTAMRKLSLQSDADLFRFA 215


>UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales
           RepID=Q485W6_COLP3
          Length = 215

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 85/203 (41%), Gaps = 10/203 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V +++   M   G+++    +        T    ++   A+  +    ++   S     
Sbjct: 10  SVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIE-LKPDVILMDISMP--- 65

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+     +  + P T+ L+++       +  ++    + G L K +T E  +  +  
Sbjct: 66  TMNGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAV-GYLLKDTTSEEIYYAIKA 124

Query: 130 SLNGVRQATDRLNNQWYINQ-----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
             NG    +  +      N      S  L+  E+ +L ++++G +  +IA+ L  + +T+
Sbjct: 125 VANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAKILNISFRTV 184

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
            AH+ N+ +KLG+ S A L+  A
Sbjct: 185 EAHRRNMKTKLGIHSLAKLISYA 207


>UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2
           Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF
          Length = 228

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 78/206 (37%), Gaps = 10/206 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  V + +   +   G+  +                  + +   +      ++   +  
Sbjct: 12  AQIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSAERAVRAH-HPHVLVLDLNMP 70

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
             +    L  +  L  + P T  +V+      A    +L       VL +A+  E+  Q 
Sbjct: 71  GEQ---SLPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGARGYVLKEAADDELV-QA 126

Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           + L+  G       L  +       +     L+  E E+LR ++ G++  +IA+QL  +I
Sbjct: 127 VRLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSI 186

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +T+ +H+ ++  K+  SS A L+  A
Sbjct: 187 RTVESHRAHIQQKVRRSSRAELVRYA 212


>UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3
           Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q01NC6_SOLUE
          Length = 216

 Score =  127 bits (320), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 79/208 (37%), Gaps = 15/208 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   G+  L     G          +++   A        V+   +      
Sbjct: 6   ILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHTP-DVVVMDVAMPG--- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+    +++ K P T  + ++    E+ ++ +L       +L  ++  ++    + +S
Sbjct: 62  LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHDLIAAVIAVS 121

Query: 131 LN-----------GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                         V     ++  +   +    L+  ERE+L+ ++ G +  ++A  L  
Sbjct: 122 EGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEVAAILNL 181

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           ++ T+  H+ N++ KL + S A L+  A
Sbjct: 182 SLYTVETHRGNILQKLNLHSGAELILYA 209


>UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria
           RepID=Q3Z8L1_DEHE1
          Length = 224

 Score =  127 bits (320), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 82/207 (39%), Gaps = 15/207 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +  V+   G   L ++ +G           E+ + +M ++    V+   +     R
Sbjct: 9   VLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSM-KVHPDVVVMDIAMP---R 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-------ASTLEIF 123
             G+    ++    P T  L++   + E  ++  L       +L          +   ++
Sbjct: 65  LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAASFLLKNVKGTQLLEAIRAVY 124

Query: 124 HQELFLSLNGVRQATDRLNNQ----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
             E  L  +  R+  D+L N+      ++    L+  E E+L+  +RG S   IA+QL  
Sbjct: 125 AGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGVSNKDIADQLYL 184

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           + +TI+ H  N+  KL V S    +  
Sbjct: 185 SNRTIQTHLSNIFKKLSVGSRTEAILY 211


>UniRef50_C4ZM15 Two component transcriptional regulator, LuxR family n=1
           Tax=Thauera sp. MZ1T RepID=C4ZM15_THASP
          Length = 226

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 13/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   GI +L    AG        + +++ + A +      V+   +    + 
Sbjct: 6   VLLVDDHSLVRAGIRALLGSIAGVAGIEEASSGRQAVELAATMQP-DLVLMDIAM---DD 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
            +GL+    +A   P  + ++++  D       +L       +L  A+  E       + 
Sbjct: 62  MDGLAATRTIAAAHPHIKVVILSMHDTGDFFEQALRCGARGYLLKDAAVAELEMAIAAVM 121

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             +++LS    R     +  +   ++  +  L+P + EIL  +  G    +IA +L  ++
Sbjct: 122 RGDVYLSPAVSRHLVGNMLARPPEDERAASVLTPRQTEILELIGSGLGTKEIARRLDLSV 181

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+ AH+  +M +LGV   A LL  A
Sbjct: 182 KTVEAHRAQIMERLGVRDIANLLLEA 207


>UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti
           RepID=Q98DH9_RHILO
          Length = 215

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 81/214 (37%), Gaps = 14/214 (6%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M   RIK   + + +   +   GI ++  + A   +      + E+        +   VI
Sbjct: 1   MVDPRIK---IVIADDHPIVRSGIRAVLEQRAEW-WVCGEADNGETAVRLAREHAAKIVI 56

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
             +S        GL     +    P T  L+    + E+ +  +L       +L      
Sbjct: 57  LDYSLP---VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGARGYLLKIEDDS 113

Query: 121 EI-------FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
           E+          + + S            +      SR L+  ERE++RF+S G S  +I
Sbjct: 114 ELVAAVAALIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRI 173

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           A +L  ++KT+ +H+   M KLG+ +   L+  A
Sbjct: 174 AARLGVSVKTVDSHRTTAMRKLGLRNAVDLVRYA 207


>UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167
           Tax=Gammaproteobacteria RepID=UHPA_ECO57
          Length = 196

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            VALI+  ++   G   L              + +E+      R      I   S     
Sbjct: 3   TVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGR-GVQVCICDISMP--- 58

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  L++L    P+    ++        L+     +   G LSK  + +     +  
Sbjct: 59  DISGLELLSQL----PKGMATIMLSVHDSPALVEQALNAGARGFLSKRCSPDELIAAVHT 114

Query: 130 SLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
              G    T  +  +    +   L+  ER++   +++G ++ +IA +L  + KT+  H+ 
Sbjct: 115 VATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHRA 174

Query: 190 NVMSKLGVSSDAGLLE 205
           N+M KLGVS+D  L  
Sbjct: 175 NLMEKLGVSNDVELAR 190


>UniRef50_A1BJU3 Two component transcriptional regulator, LuxR family n=1
           Tax=Chlorobium phaeobacteroides DSM 266
           RepID=A1BJU3_CHLPD
          Length = 203

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 78/199 (39%), Gaps = 5/199 (2%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + + +   +   G+  L                +E+    + +      +   S     
Sbjct: 3   TIIIADDHKIFRQGLSRLLADDDRFKLLGEASNGKEALN-LIWKEKPQVAVLDLSMP--- 58

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
           R +GL  ++ +      TR +++   D    +  +L       VL +A+  EI    + +
Sbjct: 59  RPDGLEVVSSIRAAHSNTRCIILTMKDDIETVRRALESGVYGYVLKEAAYEEIAEAIVKV 118

Query: 130 SLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188
           + N +     + N   Y +     L+  E E+LR + RG +  QIA +L  + +T+  H+
Sbjct: 119 ADNKLYLGRFQDNPNLYASCCEGQLTNREVEVLRCVVRGLTSRQIASELFISHRTVETHR 178

Query: 189 FNVMSKLGVSSDAGLLEAA 207
            ++M KL + +  GL   A
Sbjct: 179 QHIMEKLNIRTATGLAGYA 197


>UniRef50_B8LB61 Two component transcriptional regulator, LuxR family n=1
           Tax=Stenotrophomonas sp. SKA14 RepID=B8LB61_9GAMM
          Length = 210

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 6/200 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +AL++   +   G      +       + ++   ++F   + R      I   +  R +R
Sbjct: 14  LALLDDHEVVRRGTALHLSRDVRFR-IVASHGHSDAFIQDLRRTPVDVAIIDLALARGDR 72

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            + +  +  L   FP    L  A        IG L  + + GV+SKA  L +  + +   
Sbjct: 73  -DCMELVGLLRAAFPAVPLLAFATLSPGIH-IGPLIDAGVRGVVSKAEPLPLLSEAIVRV 130

Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190
             G+ +      N      S  LS  ERE+L  +  G ++++IA+Q  R+IKT+   K  
Sbjct: 131 SLGLDRLPPDCRN---PADSEDLSRNEREVLHLLLAGLTVSEIAQQRHRSIKTVSTQKKA 187

Query: 191 VMSKLGVSSDAGLLEAADIL 210
            + KLG+ +DA +      L
Sbjct: 188 ALRKLGLRNDAEIYAMRQQL 207


>UniRef50_Q3BU15 Two-component system response regulator, LuxR family n=12
           Tax=Xanthomonadaceae RepID=Q3BU15_XANC5
          Length = 221

 Score =  127 bits (319), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G+  L + FAG    +   ++ +   D  S      V+   S      
Sbjct: 14  VIIVDDHTLVRAGLSRLLQTFAGID-VVGEASNAQQALDMTSLHRPDLVLMDLSLPG--- 69

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
           R GL  +T++    PRT  ++++  D    +  +L    +  V+  A+ LE+        
Sbjct: 70  RSGLDAMTDVLRAAPRTHVVMMSMHDDPVHVRDALDRGAVGFVVKDAAPLELELALRAAA 129

Query: 125 -QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             ++FLS     +    +  +        LSP +REILR + RG S  +IA  L  ++KT
Sbjct: 130 AGQVFLSPQISSKMIAPMLGREKPVGIAALSPRQREILREIGRGQSNKEIAADLGISVKT 189

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  H+  +M  LG      L+  A
Sbjct: 190 VETHRARMMESLGCRRANDLVLLA 213


>UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2
           Tax=Alteromonadales RepID=B1KE04_SHEWM
          Length = 206

 Score =  127 bits (318), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 82/201 (40%), Gaps = 8/201 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + +++   +   G+ +           +    + +   + M  +    V+   S      
Sbjct: 3   IFIVDDHPIFREGLIARLSMDDDFV-IVGQAANGKEALEKMPNLMPDIVLMDISMPEM-- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+        KFP  + L+++  D +  ++  L+       L   S  E+F+    + 
Sbjct: 60  -NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRGVRGYALKDISAAEMFYALRVIH 118

Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
             G+  +       + +    +++  L+  E+ +LR ++ G +  ++A +L  +++TI  
Sbjct: 119 NGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRTIET 178

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           H+ N+  KL + + AGL+  A
Sbjct: 179 HRRNIKDKLAIKTSAGLVRYA 199


>UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT
          Length = 242

 Score =  127 bits (318), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 85/218 (38%), Gaps = 16/218 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +R V L++       G+ ++  +           ++     +AM R++    +   S  
Sbjct: 21  AQRRVLLVDDHPAIRRGMAAIIDEEPDLT-TCGEASTAPMALEAMRRLNPDIAVIDISMP 79

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE----- 121
            +    G+  +  +  + P  + L+++  D     + +L      G + K   LE     
Sbjct: 80  GT---NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGA-KGYVMKGEALECVLTG 135

Query: 122 ---IFHQELFLSLNGVRQA---TDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
              +   E+++S     +    T +       +    LS  E E+LR + RG+   +IAE
Sbjct: 136 LRKVGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIAE 195

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +L  ++KT+  H+ ++  KLG      ++  A   +  
Sbjct: 196 ELSLSVKTVETHRAHIKEKLGFKEAGEMVRFAIDWVAQ 233


>UniRef50_Q0K0R3 Response regulator, NarL-family n=3 Tax=cellular organisms
           RepID=Q0K0R3_RALEH
          Length = 216

 Score =  127 bits (318), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 80/206 (38%), Gaps = 10/206 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V + +   +  + +++   +           +S +    A+       ++  F+  RS 
Sbjct: 7   SVVIADDHPVIQLAVKATLSEIPNVR-ISAICSSGKELFAALQTQQPDLIVTDFTMERSH 65

Query: 70  -RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL  +  L    P T  +V         L+  +    +  ++ K     I  Q   
Sbjct: 66  VNDDGLRLVHRLRQSRPHTPIVVFTML-TNGGLLTRIKEMGVAAIVGKNEEPGILRQICV 124

Query: 129 LSLNGVRQ-------ATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            ++ G  Q       A            +  LSP E E++R  + G ++T+IA  L R++
Sbjct: 125 DAITGTGQRLSPGIAARMSSAGALVNGTASPLSPREIEVVRMFATGSTLTEIAGYLHRSL 184

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
            TI   K + M KL ++++A L+  A
Sbjct: 185 ATIATQKRSAMRKLNITTNADLVTYA 210


>UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4
           Tax=Proteobacteria RepID=Q1H354_METFK
          Length = 213

 Score =  126 bits (317), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 79/203 (38%), Gaps = 10/203 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+  L  +  G        + ++++Q     +    ++   S      
Sbjct: 7   IMLVDDHEVVRSGLRRLLEQNDGVEVIAEADSGEQAYQFYGEHMP-DVIVMDMSMPGMG- 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  L  +  ++P+ R ++ +  +  A    +L       V    +  ++      ++
Sbjct: 65  --GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARAYVAKSGAADDLVQAVREVA 122

Query: 131 LN------GVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
                   G+ Q           + +R LS  E E+ R ++ G  + +I+  LK + KT+
Sbjct: 123 QGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQKTV 182

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             ++  +  KLG++S   L+  A
Sbjct: 183 ANYQTLLKQKLGITSPIELVRLA 205


>UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio
           magneticus RS-1 RepID=C4XMF2_DESMR
          Length = 218

 Score =  126 bits (317), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 17/218 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +  + + +++   +   G++++ R+           +  E+ + A         +   S 
Sbjct: 1   MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTAKD-CRPDLAVLDISL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                R G+    EL    P    L+++       +  +L    L  +   A+T  +   
Sbjct: 60  P---DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGALGYLTKDAATDNLLSG 116

Query: 126 EL-----------FLSLNGVRQATDRLNN--QWYINQSRTLSPTEREILRFMSRGYSMTQ 172
                         LS+   R    +     +   +   +L+P ERE++R +  G S  +
Sbjct: 117 LRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNKE 176

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           +A  L+ ++KT   H+ ++M KLG+ +   L+  A  L
Sbjct: 177 VAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKL 214


>UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47
           Tax=Proteobacteria RepID=B6A2W0_RHILW
          Length = 223

 Score =  126 bits (317), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 7/200 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V LI+   +   G++++   F  +     T    ++  D   +I    V+   +     +
Sbjct: 9   VLLIDNHPLVLDGLKAVLETF-DHIEVAGTAGLAQTGLDIARQIQPQVVLMDINMP---K 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  +     +FP  R ++++  D    +  S+       VL   ST EI      ++
Sbjct: 65  LSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAAGYVLKDVSTDEIVAAIETVA 124

Query: 131 LNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
             G   ++   D L  +     S  L+P E +IL  +  G S  +IAE L  +  T   H
Sbjct: 125 DGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSATAETH 184

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
           + N+  KLG+++ AGL+  A
Sbjct: 185 RKNLKKKLGIATTAGLIRYA 204


>UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI00017452CB
          Length = 235

 Score =  126 bits (317), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 14/213 (6%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K+ +A ++   M   G++ L               +Q++ Q  + +     +    S   
Sbjct: 18  KKKIAFVDDHTMLRDGLQKLVESQPDLCCYWTASNTQDALQQ-LEQGKPDMLAVDISLPG 76

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST-------L 120
              R GL  + +     P    LVI+  D        L       V+  A +        
Sbjct: 77  ---RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGARGYVMKDAESTTLLQAIR 133

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQL 177
            +     ++S     Q  +  + +           LS  E E+ + +S G S  QI + L
Sbjct: 134 NVLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDAL 193

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
             ++KT+  H+ ++  KL +   A +L  A   
Sbjct: 194 NISVKTVEVHRAHIREKLKLEDGASVLRYAVRW 226


>UniRef50_B3RBJ1 Putative transcriptional regulator, signal receiver N-trem
           domain,LuxR C-term domain n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RBJ1_CUPTR
          Length = 223

 Score =  126 bits (317), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 9/205 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69
           VAL +   +    +    ++ A          +       ++R      I  F       
Sbjct: 16  VALADDHPLVMAALRDCLQRSA-RVQISAECRNGTELLGTLARHPADIAITDFCMGHGDA 74

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G + L+ LA   P TR +VI+     A ++       + G +SK   LE   +    
Sbjct: 75  SLDGFNLLSRLARHHPATRVVVIS-ARANAAIVRRAMKLGVRGYVSKEDPLEEVVRACAH 133

Query: 130 SLNGVRQATD------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           +  G                      +R  +  E E++R  ++G  +T+IA +L R++ T
Sbjct: 134 AAFGRGCFCSPAVQAALQRAALAGTPAREPTQRELEVIRLFAQGAQLTEIAAKLGRSVST 193

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAAD 208
           + + K   M KLGV ++  L+  A 
Sbjct: 194 VSSQKTVAMRKLGVQTNTALIRYAY 218


>UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159
           RepID=B9L1R6_THERP
          Length = 221

 Score =  126 bits (317), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 18/209 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +   +  +G+ +L              T+ E+ + A + +     +   S      
Sbjct: 8   VLLADDHPIVRVGLRALLEAEPDIAVVGEAGTADEAVELART-LQPDVAVLDISMPG--- 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  L  +A     TR L++     E  L+  L      G + K+S      + + L 
Sbjct: 64  -NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGG-SGYVRKSSLHTDLVEAIRLV 121

Query: 131 LNG---VRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQLK 178
             G   + QA  R   Q Y++ +RT         LS  ERE+LR  + GY+  +IA+QL 
Sbjct: 122 ARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQEIADQLF 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + KT+  ++  VM KLG S  + L+  A
Sbjct: 182 LSPKTVETYRHRVMQKLGFSRRSELVRFA 210


>UniRef50_A5VJY7 Two component transcriptional regulator, LuxR family n=14
           Tax=Lactobacillus RepID=A5VJY7_LACRD
          Length = 217

 Score =  126 bits (317), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 85/209 (40%), Gaps = 15/209 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +  + +++L  +           T  ++   A  +     +I   +    E 
Sbjct: 4   VLVADNYPIIRMAVKNLVEQLDNFKVIAEEATGIDASLRA-EQGDIDIIIMDLAMPPGE- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
             GL  +  +   FP T+ ++ +  +    +  ++       +L  +S  E+ H      
Sbjct: 62  -NGLITIKRIHEHFPNTKIIIFSSRNEPQYINQAIYNGANSYILKSSSPKELVHALRHAI 120

Query: 125 -QELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
             E +L  N +    D L     +  + +     LS  E+EIL  +  GY+  +IA ++ 
Sbjct: 121 NGEKYLDNNIMVTKKDLLVIKGGSPHFDLGNYVALSKREQEILPLIVLGYTNKEIATKMF 180

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + KT+ AHK  +M KL ++S A LL  A
Sbjct: 181 ISPKTVEAHKTKIMQKLNLASHAELLHYA 209


>UniRef50_A4W740 Two component transcriptional regulator, LuxR family n=73
           Tax=Gammaproteobacteria RepID=A4W740_ENT38
          Length = 210

 Score =  126 bits (317), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 8/191 (4%)

Query: 21  SIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTEL 80
             G   L         +   Y S      A+SR      +   +        GLS L  L
Sbjct: 15  RSGFAQLLNLEEDLIVE-GQYGSAAEAWPALSRNDIDVAVMDVAMPDE---NGLSLLKRL 70

Query: 81  AIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDR 140
             + P  R ++++  D  A +  +L       +  +    E+      + + G     D 
Sbjct: 71  RQQRPGFRAIILSIYDTPAFVQSALDAGASGYLTKRCGPEELVQAVRSVGMGGHYLCADA 130

Query: 141 LNNQWYINQ----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLG 196
           +               L+P ERE+   + +G S+  IA  L+ + KT+  H+ NV+ KL 
Sbjct: 131 VKALRGGQPVSKVLDVLTPREREVFDLLVKGESVKAIAFTLELSHKTVHVHRANVLGKLQ 190

Query: 197 VSSDAGLLEAA 207
            SS   L+  A
Sbjct: 191 CSSTIELVHFA 201


>UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales
           RepID=A0M4P6_GRAFK
          Length = 205

 Score =  126 bits (316), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 78/200 (39%), Gaps = 8/200 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + E       GI+  F       + +    + +   +   R     +I      R   
Sbjct: 4   LVIAEDHTALIDGIKVFFEYEEDIEF-VGFANNGQELIELTRRKKPNLIITDI---RMPV 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+    E+  +FP  + +  +  D + + +  +  +   G + K S+L+     +   
Sbjct: 60  MDGIQATKEILEEFPNIKIIAFSMFDQD-KAVQQMLEAGASGYILKNSSLKELLYAIRKV 118

Query: 131 LNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
             G       +  +      ++   L+  +REIL+ + +G +  +IA+QL     T+  H
Sbjct: 119 HEGEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVETH 178

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
           + N++ KLG+     LL  A
Sbjct: 179 RKNMIRKLGLQGAGELLRYA 198


>UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35
           Tax=Actinomycetales RepID=A0LVS2_ACIC1
          Length = 303

 Score =  126 bits (316), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 79/211 (37%), Gaps = 19/211 (9%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+E + R+              E+   A   +    V+     +R  +
Sbjct: 89  VLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETLP-DVVLLD---VRMPK 144

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           R G+     +    P  + +++   D EA L  ++    + G L K  +++     +   
Sbjct: 145 RTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAM-GYLLKEISIDEVAAAIRAV 203

Query: 131 LNGVRQATDRLNNQWYIN--------------QSRTLSPTEREILRFMSRGYSMTQIAEQ 176
             G    +  + ++                   +  L+  E E+LR +++G +   IA+Q
Sbjct: 204 HGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDIAKQ 263

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L  +  T++ H  N++ KL + S    +  A
Sbjct: 264 LFISENTVKNHVRNILEKLQLHSRMEAVVYA 294


>UniRef50_B3E9L1 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter lovleyi SZ RepID=B3E9L1_GEOLS
          Length = 223

 Score =  126 bits (316), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 19/218 (8%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYT---SQESFQDAMSRISFAAV 59
           +S+   + + +I+   M    + S+  +    P    T     S  + +D ++   F  +
Sbjct: 6   NSKKTMKTILIIDDHTMFRQALRSMLMERM--PAGTITCDDAGSAAAARDKLAHQDFDLI 63

Query: 60  IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
           +     + +    G+  L EL   +P    L+++    E   + +L      G L+K   
Sbjct: 64  VLDIGMLHT---NGMELLPELKSCYPALPVLMLSMYPEEQFALQTLKLGA-SGYLTKQEA 119

Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYS 169
            +     +   L G R  +   ++                   LS  E EI R ++RGY 
Sbjct: 120 ADELLTAIEKCLAGERYLSSSFSSLLISQVLQHCKAEELPHTRLSRREMEIFRLLARGYM 179

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + +IA  L  +IKT+  +K  + +K+G   +A L+  A
Sbjct: 180 LKRIANDLGLSIKTVSTYKVRLSAKMGFKDNAALIRYA 217


>UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2
           Tax=Desulfuromonadales RepID=A1ATT6_PELPD
          Length = 203

 Score =  126 bits (316), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 5/197 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +  VM   G+ +L                  + +  +  +     +   +     +
Sbjct: 4   VLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATALE-LIRSLEPDIAVLDITMP---K 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+S    +      TR +++   D       ++S      +L   +  E+      ++
Sbjct: 60  LDGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGAHGFILKDDAYEELLSALRTVA 119

Query: 131 LNGVRQATDRLNNQWYINQSRT-LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKF 189
             G   +    +           L+  EREIL  ++ G +   IA+ L  +IKT+  H+ 
Sbjct: 120 AGGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNNHRT 179

Query: 190 NVMSKLGVSSDAGLLEA 206
           N+M KL + S A L+  
Sbjct: 180 NLMGKLNLHSTAELVRY 196


>UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1
           Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT
          Length = 229

 Score =  126 bits (316), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 79/214 (36%), Gaps = 16/214 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           S  K   + L++   M   G+  +               + ++ +  +       V+   
Sbjct: 8   SPAKATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQALE-LVKSEKPDLVLADI 66

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           +      + GL  L +L  + P+   LVI+  D        L      G + K    +  
Sbjct: 67  TLP---DKNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGG-RGYIMKHEGGKKI 122

Query: 124 HQELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172
            Q +   L+G    +++++            Q   +    L+  E E+ R +  G S  +
Sbjct: 123 MQAIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKE 182

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           IA  +  + KT+  H+ N+ +KLG+ + A L+  
Sbjct: 183 IAANMHVSAKTVEVHRMNIKTKLGLKTAAELIRY 216


>UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29
           Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD
          Length = 222

 Score =  126 bits (316), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 71/206 (34%), Gaps = 15/206 (7%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           +++   +   G+  +F    G           ++   A        V+            
Sbjct: 16  IVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESGP-DVVLMDLRMPTMG--- 71

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+  +  L ++ P  R LV+   D E+ ++ ++      G L K +  E   + +  +  
Sbjct: 72  GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGAT-GYLLKDAPREDLIRAVRAAAA 130

Query: 133 GVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           G       +  +                  L+  E E+LR ++ G +  + A +L  +  
Sbjct: 131 GQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARKLFISEA 190

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAAD 208
           T++ H  +  +K GV   A  +  A 
Sbjct: 191 TVKTHLLHAYAKFGVRDRAAAVAEAY 216


>UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str.
           D14 RepID=C6J7D2_9BACL
          Length = 227

 Score =  126 bits (316), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 82/219 (37%), Gaps = 23/219 (10%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIF 61
           R+ K  V +++   M  +G+++   +  G          +E+    +  +       ++ 
Sbjct: 9   RMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDIILM 68

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
                      G     E+  +FP  + +++     +  ++ ++    +  VL   S   
Sbjct: 69  DLMMPGM---NGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVLKTVSA-- 123

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTL------------SPTEREILRFMSRGYS 169
              +EL  +L G  +    +  +     +R L            +  E+E+L  ++ G S
Sbjct: 124 ---EELIYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKS 180

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
              IAE+L  +IKT++ H  N++ K  +     L   A 
Sbjct: 181 NKDIAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAH 219


>UniRef50_A1ZJS0 Transcriptional regulatory protein DegU n=2 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZJS0_9SPHI
          Length = 223

 Score =  126 bits (316), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 91/216 (42%), Gaps = 19/216 (8%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD-AMSRISFAAVIFSFSAMRS 68
            +A+ +   +   G+  +  + A     L     Q+     A +      ++      + 
Sbjct: 5   TIAIADDQQLFREGLTFIIHQHADLKIALEAEHGQDLLNQLAQADKLPEVILMDIKMPQM 64

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+ C   L  ++P+ + + +   D E  ++  L    ++G L K ++ +   + + 
Sbjct: 65  ---DGMECAKILKQRYPKIKIITLTVYDQEDYVL-HLLDLGVNGYLRKLTSGQDVCKAIR 120

Query: 129 LSLNGVRQATD--------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
                     D              +++++  ++    ++P ERE+L  + + Y+  +IA
Sbjct: 121 TVCEKGYYFDDFVTQIMLSGLKRKRQISSKPKVDDDVHMTPREREVLALILKEYTTQEIA 180

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           +QL  +I+T+  H+ N+++K GV +  GL+  A  +
Sbjct: 181 DQLFVSIRTVETHRKNLLTKFGVKNVVGLVVKALQM 216


>UniRef50_B1K3E7 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia cenocepacia MC0-3 RepID=B1K3E7_BURCC
          Length = 223

 Score =  125 bits (315), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 78/203 (38%), Gaps = 8/203 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV + +   + S G+ ++          +   ++       + +     +I  +S    +
Sbjct: 15  NVVVADDHPVVSTGVAAILTAEMD-INVVGVASTISELLLLLQQQPCDVLICDYSFSGDQ 73

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
           + +G++    L    P    +V+      A L+  +  + + G L K+S        +  
Sbjct: 74  QPDGVALFKRLRRNHPHVAIVVLTAHQDIALLVSRVMNTGVAGFLRKSSQDFARLAAIVR 133

Query: 130 SLNGVRQATDRLN-------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            ++  +   D           Q       +LS  E EI R + RG S+T+IA    R+IK
Sbjct: 134 RVHAGQTFVDPAVAVDLLEVGQAAQTSIESLSERELEIFRMLGRGMSVTEIAMHTNRSIK 193

Query: 183 TIRAHKFNVMSKLGVSSDAGLLE 205
           TI   K   M KLG  S+A L  
Sbjct: 194 TISHQKMRAMHKLGARSEADLYR 216


>UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q9H4_DESAH
          Length = 217

 Score =  125 bits (315), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 77/207 (37%), Gaps = 14/207 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   M   GI  +     G           E   + +S      VI   S     +
Sbjct: 6   VVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIE-LLNLLSTQPADLVILDISMP---K 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
             G+    ++   +P  + L ++       L  + S      +L + +  EI        
Sbjct: 62  MSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGANGYLLKEDTDTEILTAMDTIL 121

Query: 125 -QELFLSLNGVRQATDRLN---NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
             + FLS    +   D L             TLSP E E+L  ++ G S  +IA+ L  +
Sbjct: 122 EGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIADILCIS 181

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +T+  H+ ++M +L + + A L++ A
Sbjct: 182 TRTVEHHRASIMKRLDLRTLADLIKYA 208


>UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum
           aromaticum EbN1 RepID=Q5NY27_AZOSE
          Length = 215

 Score =  125 bits (315), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 74/205 (36%), Gaps = 12/205 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   M    + ++  K  G    +   ++ +   D +S                  
Sbjct: 5   IVLADDHQMFRHALRAMLEKEPGIR-IVGEASNGDELIDLISHQPVDIACVDIGMPGM-- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+     L    P  R + ++       ++  L+      V    +  E+      + 
Sbjct: 62  -NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGATGYVTKAEAGEELLRAIHTVQ 120

Query: 131 LNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            +      D         L+N      +  ++  ER++L+ ++ GY+ T+IA++L     
Sbjct: 121 QSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHLAPS 180

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  H+ N+M KL + S A L + A
Sbjct: 181 TVEVHRRNIMRKLDLHSVAELTKYA 205


>UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28
           Tax=Proteobacteria RepID=B2JSN3_BURP8
          Length = 210

 Score =  125 bits (314), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 79/204 (38%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G++ +                 E   D +   +   ++   +      
Sbjct: 4   ILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSEV-VDKLRTCAVDLLLLDMTMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  +  +  + P    LV++  D       +L      G L+K S  ++    +   
Sbjct: 60  ISGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGAT-GYLTKDSDPDVLLAAIRKL 118

Query: 131 LNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            +G R    +L        ++  +     LS  E ++L+ ++ G S+ +IA+    + KT
Sbjct: 119 ADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSAKT 178

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           I  HK  +M KLG++++A ++  A
Sbjct: 179 ISTHKMRLMQKLGLANNAEVIRYA 202


>UniRef50_C5A924 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Burkholderia glumae BGR1 RepID=C5A924_BURGB
          Length = 218

 Score =  125 bits (314), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 78/201 (38%), Gaps = 6/201 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE- 69
           VAL +   + +  +  L  +       +H   S       +       +I   S   S+ 
Sbjct: 13  VALADDHPLVASAMTKLLGETPS-ITVVHVSHSGAELLQQLRADPCEMIITDLSMGTSDH 71

Query: 70  -RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL- 127
             ++GL  ++ L   +P  R +V    +    L   L       V+ K  +LE     + 
Sbjct: 72  ADQDGLKLVSALRKNWPSARVIVYTALNH-PALAQRLLYLGAHAVVCKEDSLEELLAAVD 130

Query: 128 FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
            +++ G    + +L        +  L+P E E+LR +  G S+  I+ ++   + T+  H
Sbjct: 131 QVAVQGSTYLSKQLRGT-APAPASALTPRELEVLRHIGCGLSVVDISRRMFVTVSTVSTH 189

Query: 188 KFNVMSKLGVSSDAGLLEAAD 208
           K N M KL + S   L++   
Sbjct: 190 KRNAMDKLNIRSTVELIQYIH 210


>UniRef50_B6WQV4 Putative uncharacterized protein n=1 Tax=Desulfovibrio piger ATCC
           29098 RepID=B6WQV4_9DELT
          Length = 222

 Score =  125 bits (314), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 21/216 (9%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   GI SL    +           +E+   A + +S   VI   S      
Sbjct: 7   ILLVDDHKLLMEGIRSLLAPHSHLRVAGMAPDGKEAVGLA-ATLSPDLVIMDISMPGM-- 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123
             G+     +    P TR L+    + +  L+  L    + G + K+    +        
Sbjct: 64  -NGVEASRAILQIRPETRILIYTGHEDQRHLLE-LIQLGIMGHVCKSDPPSVLLQAIDAV 121

Query: 124 -HQELFLS--------LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
              E+FLS           +RQ   RL+          LSP E+EI R ++ GYS+ QI 
Sbjct: 122 RQGEVFLSCADPGGCMAALMRQNRQRLSPAEGGPDIGMLSPREKEIFRLLADGYSVRQIG 181

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           + L  + KT+  HK++V++KL  SS   L + A  L
Sbjct: 182 DALNISPKTVETHKYSVLTKLRASSINELTKMAIRL 217


>UniRef50_Q0K3Q8 Response regulator, NarL-family n=1 Tax=Ralstonia eutropha H16
           RepID=Q0K3Q8_RALEH
          Length = 219

 Score =  125 bits (314), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 7/199 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           VAL +   +   G++ +     GN                + R+    ++          
Sbjct: 10  VALADDHAIVLEGLKQVLSGV-GNLVLAGEAADGAQLLGLLERVPTDLLVMDLGMPG--- 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +GL+ +  L  + P  R LV+      A +  +   +  +G L K+  +      L   
Sbjct: 66  VDGLAFVERLRTRHPALRILVLT-GSAGAGMAHAAIDAGANGYLVKSGDISELVPALMAL 124

Query: 131 LNG--VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188
             G     A          +   TL+  E +IL  ++RG +   IA QL  +  T R H+
Sbjct: 125 REGRNFVAARATAPATAAPDGIATLTRRELQILMLIARGATAGDIAAQLDISPLTARKHR 184

Query: 189 FNVMSKLGVSSDAGLLEAA 207
            N+M KL + + A ++  A
Sbjct: 185 ENLMRKLDLHNTAEVVAYA 203


>UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1
           Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ
          Length = 215

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 77/206 (37%), Gaps = 8/206 (3%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           +  +  V +++   +   G   +  ++      +    S E     ++R+    V+    
Sbjct: 2   KAARIAVLVVDDHTLHRDGTRRILEQYDDVD-VVGDAASGEDALAMVNRLHPRVVLMDI- 59

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
             R     G+     +  + P TR L++   D E  + G+       G LSK +      
Sbjct: 60  --RLPGMNGIEATRRIRERHPDTRVLIVTAYDDEEYVRGA-FDVGAAGYLSKTAPGRELV 116

Query: 125 QELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           + +     G       L         + + TL+  ER +LR ++ G    QIA +L  + 
Sbjct: 117 EAVRAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +T+  H   +  KLGV+S    +  A
Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRA 202


>UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD
          Length = 218

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 89/211 (42%), Gaps = 15/211 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V + +   +   G++++ +  +G    L    + E       R++    +   S     
Sbjct: 6   TVVIADDHALVREGLKTILKSQSGIS-VLGMAENGEEAVRLCRRLNPDVALMDLSMP--- 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------I 122
            + G+  + EL+ +  +T+ L +        +  +L       VL  +S+ E       +
Sbjct: 62  IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGASGYVLKTSSSKELVMAIETV 120

Query: 123 FHQELFLSLNGVRQATD---RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
              +++L+ +   +      + +     +   +L+  ERE+L+ +  GY   +IA+ L  
Sbjct: 121 MQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLVI 180

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           ++KT+  H+ N M KLG+ S A L   ++ L
Sbjct: 181 SVKTVEKHRSNFMKKLGLRSKAELKAYSEEL 211


>UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2
           Tax=Geobacter RepID=C6E2Z1_GEOSM
          Length = 216

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 78/207 (37%), Gaps = 14/207 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   GI  L  +F            +++ + A + ++   V+   +      
Sbjct: 4   VMVVDDHSIVREGIRILLERFPDLSVVAEADNGRKASELA-ADLAPHVVLMDMTMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
             G+     L    P  R L+++    +  +  +        +L   ++ E+        
Sbjct: 60  LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGARGYLLKDCASAELVQAVRQVA 119

Query: 125 -QELFLSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
             E+++    +            +        L+P ERE+L+ ++ G +    A QL  N
Sbjct: 120 CGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQLNIN 179

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +KT+  H+  +M KL + S A L + A
Sbjct: 180 VKTVDTHRQQIMKKLKMRSVAELTKYA 206


>UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root
           RepID=A1WBJ7_ACISJ
          Length = 239

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 78/205 (38%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + +++   +   G+     +             +E+  D +       ++   S      
Sbjct: 33  IGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREA-IDLVRVHEIDVLVMDLSMPGQ-- 89

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
             GL  L  L  K P    L+++    E   I +L      G L+K    +   + +   
Sbjct: 90  -SGLDALAMLRAKAPDMGILILSGYPEEHYAI-NLIRQGASGYLNKECEPKEIVEAIRTI 147

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                +L+ +       +LN +        LS  E ++   +++G +   IA+ L  ++K
Sbjct: 148 ALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLSLSVK 207

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  ++  +M K+G+SS++ L   A
Sbjct: 208 TVSTYRTRLMEKMGLSSNSDLTYYA 232


>UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7
           Tax=Bacteria RepID=B3DW63_METI4
          Length = 243

 Score =  125 bits (313), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 16/211 (7%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G+  L     G         +     + + +     V+   S      
Sbjct: 21  VLIVDDHAILREGLIQLINSTPGLS-VCGAAKNAHEGFELIEKTMPDVVLVDISLPG--- 76

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           + GL  + ++   +P    LV++  +        L      G L K    +     +   
Sbjct: 77  KSGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGA-RGYLMKNEGGQKLIAAIQKV 135

Query: 131 LNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           L G    ++R+ N+             I+    LS  E E+ + + +GY   QIAEQL  
Sbjct: 136 LAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLSL 195

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           ++KT+ A++ ++  KL + S   L+  A   
Sbjct: 196 SVKTVEAYRASIKQKLYLKSGPQLVHYAISW 226


>UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR
          Length = 326

 Score =  125 bits (313), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 78/209 (37%), Gaps = 10/209 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFSFSAMR 67
           V LI+   +   G+        G          + +     +  +      VI       
Sbjct: 117 VLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVITDIGMRG 176

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G++    L  ++P    L+++  D    +  ++      G + K +  +     +
Sbjct: 177 MG---GIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGA-RGYVLKDAPADELLAAI 232

Query: 128 FLSLNGVRQATDRLNNQWY---INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
              L G    + R+        ++    L+P ER+IL  + RG +   IA QL  +++T+
Sbjct: 233 QAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQLGVSVRTV 292

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213
             H+ N+  KLG+   A L++ A   L +
Sbjct: 293 ETHRLNLKRKLGIEGRAELVKYAVQQLGL 321


>UniRef50_D0L1Q4 Two component transcriptional regulator, LuxR family n=1
           Tax=Halothiobacillus neapolitanus c2 RepID=D0L1Q4_HALNC
          Length = 212

 Score =  125 bits (313), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   M    +  L     G         S E+    +   +   V+          
Sbjct: 4   VMLVDDHTMVRKALAHLIGSEQGIGVTSEA-DSGEAALALLKTETVDVVLCDIHMPGMG- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  +  +  ++P    + +   + +A L  S+  + + G ++K +  +     +  +
Sbjct: 62  --GLEAIRRIQARYPEIGLIAVT-AEADAALARSVLEAGVHGYVTKDAPPQELITAIENA 118

Query: 131 LNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            + +R  + R+  +  +       +   TLS  E+++L  +  G S   I++ L  + KT
Sbjct: 119 RHKIRFISSRIAQEIALQSMRKTADPFETLSGREQQVLMMILEGKSNQFISDALCVSPKT 178

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  +K  +  KLGV++D  LL  A
Sbjct: 179 VSTYKVRLQEKLGVNNDIELLRLA 202


>UniRef50_Q1LGB9 Two component transcriptional regulator, LuxR family n=4
           Tax=Cupriavidus RepID=Q1LGB9_RALME
          Length = 300

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 76/206 (36%), Gaps = 12/206 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   + +  I +  +            TS    Q  +  +    V+  +       
Sbjct: 84  ILLADDHPVITAAIRARVQSSQTGWEVCGEATSATELQQQVDLLQPDVVVTDYHMPGPTE 143

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+  +T L  + P    +V+        ++ ++    + G+L K S L      +  +
Sbjct: 144 LDGVRLITSLRRRHPSISVVVLTMI-TNPLVLRTILDVRVHGLLIKDSPLAEIMTAIGRA 202

Query: 131 LNGVRQATDRLNNQWYINQSRTL-----------SPTEREILRFMSRGYSMTQIAEQLKR 179
             G               + RT+           S  E E+LR    G ++T+IA  L R
Sbjct: 203 QRGFTYIGKSALRALAPTELRTMLPCGRDGEQRPSAREMEVLRLYLTGRTVTEIATTLCR 262

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLE 205
           ++KTI   K   M KLGV++D  L E
Sbjct: 263 SVKTISRQKNCAMQKLGVTNDRELFE 288


>UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1
           Tax=bacterium Ellin514 RepID=B9XL75_9BACT
          Length = 234

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 17/215 (7%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           R K   V L +   +   G+ S                 QE+    +  +S   V+    
Sbjct: 15  RKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSK-VRELSPEIVLMDLD 73

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   GL     +  +FP  + L+++    +  ++  +  S   G + K + L    
Sbjct: 74  MP---TMSGLEATKIIRREFPLVKVLILSIHTNKDYVL-QIIKSGAQGYVLKDAPLTELV 129

Query: 125 QELFLSLNGVRQATDRLN------------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172
           + +     G    +  ++            N      S+ L+  E E+L  ++ G S  +
Sbjct: 130 RAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNKE 189

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +A ++   ++T+  H+  VM+KL + + AGL + A
Sbjct: 190 MASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYA 224


>UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17
           Tax=Bacteria RepID=Q1AVR6_RUBXD
          Length = 220

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 18/210 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V ++E   +   G+ +L     G           E+ +          ++     +R  R
Sbjct: 7   VMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGARPEVVLV----DVRMPR 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+  +  L  + P    +++   D +  +   L      G + K +  E     +   
Sbjct: 63  MDGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGA-RGYILKDTPSEELAAAIEKV 121

Query: 131 LNG-----------VRQATDRLNNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQL 177
             G           V     RL+      Q  +  LS  E E+LR ++ G S  +IA  L
Sbjct: 122 HRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARAL 181

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
                T++ H  +++ KLG          A
Sbjct: 182 YITEGTVKNHISSILRKLGFRDRTQAALYA 211


>UniRef50_Q1LFI0 Two component transcriptional regulator, LuxR family n=2
           Tax=Cupriavidus metallidurans CH34 RepID=Q1LFI0_RALME
          Length = 215

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 80/204 (39%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +  I + S   +       +   +S     +A++      VI  FS   +E 
Sbjct: 7   VLVCDDHPIIVIALRSELARIGQFSEVVTA-SSVNEILNALNDPEVGIVITDFSL--NEA 63

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------I 122
            +GL  +  +    P    +V + +      +  +  +     +SK             +
Sbjct: 64  GDGLQLIGRIKRMRPDVAVIVFSMN-ASPPAVRDMIAAGASAFVSKTCGTRDVAEACRVV 122

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                F++   +    D+ +        + LSP ERE+LR +++G S+ +IA +  R+ K
Sbjct: 123 LAGRKFVAPASLAHLLDQDDGGTPQAALQRLSPREREVLRLLAQGLSLREIAARFNRSRK 182

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           TI   K   M+KLG++ D  L   
Sbjct: 183 TISVQKCAAMAKLGLTHDMELGRY 206


>UniRef50_B3E9K5 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter lovleyi SZ RepID=B3E9K5_GEOLS
          Length = 214

 Score =  124 bits (312), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 14/211 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYT--SQESFQDAMSRISFAAVIFSFSAM 66
           + + L++   M   G+ S+      +   L      S E     + +  +  V+   +  
Sbjct: 2   KRLLLVDDHAMVRKGLVSILSVLQEDGMLLSCDEAGSGEDALGLLKQYRYDLVVLDIAMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF--- 123
                 GL  L+ +   +P    L+++    E   + SL       +  K +  E+    
Sbjct: 62  ELG---GLELLSIIHENWPTLPVLMLSMFPEEQFALRSLKLGASGYLTKKEAADELLLAV 118

Query: 124 ----HQELFLSLNGVRQATDRL--NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
                 + +LS +      ++   +         TLS  E +ILR ++ G S+  IA  L
Sbjct: 119 GQLLKGKRYLSQSLSTSLINQALASGDNSRPSHATLSNREFQILRSLATGKSLKAIALDL 178

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           + +IKT+  +K  + +KLG  +D  L+  A+
Sbjct: 179 ELSIKTVSTYKARLFAKLGFHNDVDLIAYAN 209


>UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2
           Tax=Geobacter RepID=B5EEC0_GEOBB
          Length = 216

 Score =  124 bits (311), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 11/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +  VM   G+ +L  +                 +  +  +    V+   S      
Sbjct: 5   IILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENMP-DVVVLDLSMPGM-- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
             G    + +  K P    ++++       +I +L       +L + +  E+        
Sbjct: 62  -NGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWAFQELVTAVRCVF 120

Query: 128 ----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               +LS          L ++       +L+P E +  R +  G +  +I  +LK + KT
Sbjct: 121 KDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKISSKT 180

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  ++  VM KL +S+ A L+  A
Sbjct: 181 VETYRLKVMKKLNISNIAQLVNHA 204


>UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP
          Length = 215

 Score =  124 bits (311), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 13/207 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD-AMSRISFAAVIFSFSAMRSE 69
           + L +   +   GI+S+  +   N   +    + +   D A+   +    +   +     
Sbjct: 4   ILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP--- 60

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G++ + +L    P  + +V++  D  A +  +        V+  +S  EI      +
Sbjct: 61  ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVVKVSSADEIIEAIKEV 120

Query: 130 SLNGVRQATD---------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
           S       +                       L+P E++IL+ ++ G+S  +IA++   +
Sbjct: 121 SAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEFGLS 180

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + T+  H+ N+M KL +   A L+  A
Sbjct: 181 LNTVHVHRNNIMRKLDIHKQAELVRYA 207


>UniRef50_D2Q428 Two component transcriptional regulator, LuxR family n=9
           Tax=Actinobacteria (class) RepID=D2Q428_9ACTO
          Length = 213

 Score =  124 bits (311), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 19/215 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + +R V +++   M   G+ S           +      +S   A+       V+     
Sbjct: 1   MSQRRVVVVDDHDMFRAGVRSEIGASVD---IVGEGADVDSAVKAIVAAEPDVVLLDVHL 57

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G   + ++  + P  + L ++  D    +IG +      G ++K  +      
Sbjct: 58  PGGG---GTEVMKQVHQRHPEVKFLALSVSDAAEDVIGVIRAGA-RGYVTKNISGTELVD 113

Query: 126 ELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQI 173
            +    +G    + RL                       LS  ERE+LR ++RGY+  ++
Sbjct: 114 AIGRVADGDAVFSPRLAGFVLDAFSGAIDIASVDEDLDRLSQREREVLRLIARGYAYKEV 173

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           A +L  ++KT+  H  +V+ KL +S+   L   A 
Sbjct: 174 ARELFISVKTVETHVSSVLRKLQLSNRHELTRWAT 208


>UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae
           RepID=B8GSX5_THISH
          Length = 220

 Score =  124 bits (311), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 85/209 (40%), Gaps = 16/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRK---FAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +V L++   +  +GI  L  +     G       ++ +E+  +A  R+    V+   +  
Sbjct: 3   DVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEA-KRLKPDVVLMDINMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL     +    P  + LV+   D E  +   +  +   G L+K   +E     
Sbjct: 62  GIG---GLVATRRIVEAQPSVKVLVLTAMD-EGPVPRWVLEAGASGYLTKGCRIEEMIAA 117

Query: 127 LFLSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           +  ++ G R  +  +  +  +        N    LS  ER+IL  + +G +   IA  L 
Sbjct: 118 IQGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATALN 177

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + KT+  +K  VM KLG+S+D  L+  A
Sbjct: 178 ISPKTVSTYKCRVMGKLGISNDMQLVTLA 206


>UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga
           thiooxidans DMS010 RepID=C0N6H7_9GAMM
          Length = 214

 Score =  123 bits (310), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 83/204 (40%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G+  L  +           + ++++Q     IS   ++   S      
Sbjct: 7   VMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPE-ISPDVLVMDMSMPGMG- 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  +  +  ++   + ++ +  +     I SL+   + G ++K+   E   + +   
Sbjct: 65  --GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAM-GYVAKSGHAEDLVKAVREV 121

Query: 131 LNGVRQATDRLNNQWYI-------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            +G    +  + ++  +       N ++ L+  E E+ R ++ G  +  IA +L    KT
Sbjct: 122 KSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQKT 181

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  ++ ++  KLG+ S   L+  A
Sbjct: 182 VANYQTSLKQKLGIHSPVDLVRLA 205


>UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2
           Tax=Shewanella RepID=B8CN77_SHEPW
          Length = 206

 Score =  123 bits (310), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G+       +           Q++ +  ++++    V+   +  +   
Sbjct: 4   VLLVDDHPLFREGLRYRLSLDSDIEVLAEADNGQQALE-ILNKMPVDLVLTDINMPQM-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G+  L  +  +    + ++++  D +  ++ ++     DG + K    +   + +   
Sbjct: 61  -DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGA-DGYILKDVPGKELIEAIKKV 118

Query: 131 LNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
             G R  +      L+ +    +   ++  E+ +LR +S G +  +IA+++  +++T+  
Sbjct: 119 AAGKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTVET 178

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           HK N+  KL + S AGL+  A
Sbjct: 179 HKRNIKQKLMIDSTAGLVRYA 199


>UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZFU2_9SPHI
          Length = 219

 Score =  123 bits (310), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 79/210 (37%), Gaps = 13/210 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF-QDAMSRISFAAVIFSFSA 65
           +K  V + +   M   G+E+L +           Y    +F    ++++     +     
Sbjct: 5   EKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVLDVDM 64

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +GL    ++  ++P  + L++   + E+ +   ++      +L      E+ + 
Sbjct: 65  PVQ---DGLETTRKIRTEYPNIKVLILTMHNNESYIKEIIAAGASGYILKNRGASELVNA 121

Query: 126 ELFLSLNGVRQATD---------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
              +       +           + + +   N    L+  E+E+L  + +G +  +I++Q
Sbjct: 122 IRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTKEISKQ 181

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           L     T+  H+ N++ KL V +   L+  
Sbjct: 182 LFIADTTVETHRRNLIDKLEVKNSKELILY 211


>UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium
           roseum DSM 5159 RepID=B9L0H3_THERP
          Length = 245

 Score =  123 bits (310), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 76/217 (35%), Gaps = 24/217 (11%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           N+ +++   +   GI     +              E+ + A   +S   ++   S     
Sbjct: 5   NILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLADE-LSPDVILVDLSLPGM- 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL     L  + P+   +++     + +L  ++         +K    E     +  
Sbjct: 63  --NGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGA-SAYCTKDIEPEQLIDVITR 119

Query: 130 SLNGVRQATDRLNNQWYINQS-------------------RTLSPTEREILRFMSRGYSM 170
              G     + + ++ ++                        L+P E EIL  ++RGYS 
Sbjct: 120 VARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVARGYSN 179

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +IA+ L  + +T++ H  +++ KL V+     +  A
Sbjct: 180 KEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYA 216


>UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1
           Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM
          Length = 206

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 73/202 (36%), Gaps = 10/202 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G+  L          +      +     +  ++    +   S      
Sbjct: 4   IIMADDHTIFRQGLAHLLSAHQELE-IVGEAGRGDDALQLIRDLNPDVALLDISMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  +  +  +   TR L++   D     I +     L  V+ K +        +   
Sbjct: 60  LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVV-KDNAFSELLDAILAV 118

Query: 131 LNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
             G R  ++ +       +   +    LSP E+E++R ++ G +  +IA  L  + KT+ 
Sbjct: 119 AAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKTVD 178

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            H+  +M KL + + A ++  A
Sbjct: 179 THRTRLMRKLNLHTTADVVRYA 200


>UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria
           RepID=Q5NZX4_AZOSE
          Length = 211

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G++                   E    A+   +   ++   S      
Sbjct: 4   VLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVL-AAIKTCNAHVLLLDMSMPG--- 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  +  +  ++P    LV++    E +L   +  S   G ++K    EI    +   
Sbjct: 60  LSGVDLVRRVKSEWPGLPILVLSMY-GETQLAAKVLQSGASGYVTKGKGREILLSAIRKV 118

Query: 131 LNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            +G R     L  +          +    L+  E +ILR +  G S+TQIA +L  + KT
Sbjct: 119 ASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSPKT 178

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  HK   M KL   ++  LL+ A
Sbjct: 179 VSTHKIRAMQKLHCQNNVELLKYA 202


>UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1
           Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1
          Length = 212

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 84/206 (40%), Gaps = 14/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +A+ +   +   G+  +  +              E+ +    +     ++   +      
Sbjct: 4   IAIADDHALLREGMRRMLSQSELIEVVGEASNGAEAVEVVKEKAP-DVLLLDITMP---V 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           ++G+    ++      T+ L+++    E   + +L     +G +SK + LE   + +   
Sbjct: 60  KDGIEATADILALNVNTKILILSMHADEQYALRTLRAGA-NGFISKGARLEELLKAITDV 118

Query: 131 LNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             G R   D++   +     R         TLS  E +++  +++G +  +IA  L+ ++
Sbjct: 119 HEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQISV 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  H+ +V+ KL + +++ +   A
Sbjct: 179 KTVDTHRSHVLKKLELRNNSDITRFA 204


>UniRef50_A9DX27 Response regulator n=1 Tax=Kordia algicida OT-1 RepID=A9DX27_9FLAO
          Length = 213

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 15/211 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  + + +   + S GI  +        Y +H  TS +     +        I   S 
Sbjct: 1   MKKIQLLICDDHNLVSEGIAVMLESENN--YNIHIVTSGKQAIQHLHNHEVHVFILDISM 58

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +GL  L  L  +      L++   D    +  ++      G + K+++  +  +
Sbjct: 59  PEM---DGLVVLDTLKEEKLSQNVLMLTMHDQAKYIKKAIEKGA-KGYVLKSTSKTMLVE 114

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRT---------LSPTEREILRFMSRGYSMTQIAEQ 176
            +    NG      RL          +         L+P E +IL+ +++     +IAE 
Sbjct: 115 AIQKVYNGENFYDPRLTEILLNTSEESKNKQATHVKLTPREIDILKLIAQNKKTKEIAEL 174

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           L  ++ T+++HK N+ SKL + S + L+  A
Sbjct: 175 LFISVNTVQSHKKNLYSKLNIHSVSELVTYA 205


>UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD
          Length = 220

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 14/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+  L  +  G        +  ++ Q A + +    V+          
Sbjct: 12  VLITDDHPVFRQGLRGLL-EALGVEVVGEAESGPQAVQLA-AELQPDVVVMDLHMPGG-- 67

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH------ 124
             G+     +    PR   LV+     +  +  ++       +L ++   EI        
Sbjct: 68  -NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGARGYLLKESGAEEIARAVRAVA 126

Query: 125 -QELFLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             E        R+      +     Q+    L+  ERE+L+ +++G S  +IA+ L  + 
Sbjct: 127 AGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLFLSP 186

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+R H  N+  KL V+  A  +  A
Sbjct: 187 KTVRNHVSNIFMKLHVADRAQAIVLA 212


>UniRef50_A0NVX8 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Labrenzia aggregata IAM 12614 RepID=A0NVX8_9RHOB
          Length = 217

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 10/206 (4%)

Query: 8   KRNVALI-EKCVMSSIGIESLFRK-FAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFS 62
           +R  A+I +   +   G+     K     P  ++          A++ +       ++  
Sbjct: 4   QRYSAIIADDHAIVRSGLRDALEKPGLIEPEGINVLAEAGDGLSAIAEVRRHRPDLLLLD 63

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            S   +    G+  L E       TR +V+        LI  L  + +DG+ SKAS    
Sbjct: 64  VSMPLAG---GVEVLIEARRWSKETRVVVLTGIS-AVGLISDLIETGVDGLFSKASDNAE 119

Query: 123 FHQELFLSLNGVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           F+Q+L   L G R  +D  L           L+  ER+ L  +  G S  +IAE L  +I
Sbjct: 120 FYQKLPGILRGQRHISDVFLKILEETPAPPVLTDRERQTLNLILAGRSNKEIAEGLGISI 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  H+ ++M KL V S   L+  A
Sbjct: 180 KTVDKHRTSLMQKLNVHSVPQLMAKA 205


>UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9
           Tax=Betaproteobacteria RepID=Q47FR0_DECAR
          Length = 218

 Score =  123 bits (309), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 82/204 (40%), Gaps = 14/204 (6%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +  IG++ +                 E+  + + + +F A++   +      R 
Sbjct: 6   IADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVE-LRKGTFDALVLDLTMPG---RN 61

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+  + ++  +FP+   L+++    +   + SL      G L K S   +    +    +
Sbjct: 62  GIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGA-SGYLCKDSAETLLADAIRKVAD 120

Query: 133 G---------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           G          +     L+ +        L+  E +I   + +G  +T+I  QL  ++KT
Sbjct: 121 GGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNLSVKT 180

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  HK ++++K+ + + A L+  A
Sbjct: 181 VSTHKASILAKMNLRNSAELVRYA 204


>UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2
           Tax=Proteobacteria RepID=C5V4R9_9PROT
          Length = 211

 Score =  123 bits (309), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 12/203 (5%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +   GI+ +         +     + E  +     ++F  ++   S        
Sbjct: 6   IADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG---VT 62

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+S +T++  ++P    L+ +    EA++      +   G ++K S  EI  + +     
Sbjct: 63  GMSLITQIKAQYPAFPILIFSMH-NEAQIASRAIKAGAAGFIAKDSDPEILLEAIRRVAA 121

Query: 133 GVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           G       L  Q   +            LS  E EI   +  G  +  IA  L  + KT+
Sbjct: 122 GRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNISNKTV 181

Query: 185 RAHKFNVMSKLGVSSDAGLLEAA 207
             HK N+++K+ + S A L+  A
Sbjct: 182 STHKLNLITKMKLHSTADLVHYA 204


>UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1
           Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT
          Length = 218

 Score =  123 bits (309), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 12/218 (5%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  V L++   M   G+  +    +            E+        S   V+   +  
Sbjct: 4   NKIKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL- 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK-------AST 119
             +   G   +  +    P    L ++  D       +L       V+ +       A+ 
Sbjct: 63  --KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGARGYVMKQEPGEILLAAI 120

Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQL 177
            E+    ++LS     +   R+ +     +    TL+P+E E+L  + +G+S  +IA+ L
Sbjct: 121 HEVLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAKLL 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            R+IKTI  H+FN+  KL +   A L+  A   +    
Sbjct: 181 CRSIKTIETHRFNIRVKLHLKDGADLIRYATRWISEEP 218


>UniRef50_Q1LLE4 Two component transcriptional regulator, LuxR family n=1
           Tax=Cupriavidus metallidurans CH34 RepID=Q1LLE4_RALME
          Length = 213

 Score =  123 bits (308), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 88/208 (42%), Gaps = 15/208 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ +++   +   GI  + ++ +     L T+T    F  A+   +   VI  ++   S+
Sbjct: 4   SIMVLDDHEIVHQGIVRVLQQNSAFA-ILGTFTRSRDFVQALRNKAPDLVIIDYALEPSD 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+  +  +  ++P  + LV++  D    +  ++     DG   K  ++      +  
Sbjct: 63  -ADGIGVIRMIRRQYPGIKILVLSAHDSPVTIALAMKAGA-DGYCIKNGSIADITAAIAK 120

Query: 130 SLNGVRQATDRLNNQWYINQ------------SRTLSPTEREILRFMSRGYSMTQIAEQL 177
            L G      ++ +     +            +  L+  ERE+LR    G ++ +IA + 
Sbjct: 121 ILRGASHIPAQVASLSVFGKEQGEGAPGSGGLTAALTEKEREVLRCFLDGMTVNEIAAKF 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLE 205
            R+ KT+  HK + + KLG+ SD  L +
Sbjct: 181 SRSKKTVSGHKQSALRKLGIRSDNELFK 208


>UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1
           Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1
          Length = 213

 Score =  123 bits (308), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 86/211 (40%), Gaps = 14/211 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + + N+ + +   M   GI SL  +              E+ +  + +     +I   S 
Sbjct: 1   MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEALE-IIKKGVVDFIILDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+     L  + P  + L+++       ++  L    ++G L K +  E   +
Sbjct: 60  PEM---DGIELSKILKKQHPNVKILIVSTHS-NVMIVSRLIRIGVNGYLLKNAAKEELLK 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQ 176
            +    +G     + L  +   N S+          LS  E+EIL  ++  Y+  +IAE+
Sbjct: 116 AINTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEK 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
              ++ T+  H+ N++SKL   + AGL++ A
Sbjct: 176 TFISLNTVNTHRRNLLSKLNAKNTAGLVKYA 206


>UniRef50_UPI00016AE77A regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Burkholderia thailandensis MSMB43
           RepID=UPI00016AE77A
          Length = 194

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 76/180 (42%), Gaps = 11/180 (6%)

Query: 38  LHTYTSQESFQDAMSRISFAAVIFSFSAM--RSERREGLSCLTELAIKFPRTRRLVIADD 95
           + T  S     D ++R     VI  ++      +  +G++ L+ +  + P    +V    
Sbjct: 2   VGTARSPGDLVDMLTRRECDVVISDYTMSSGCEKYSDGIAMLSLIRRRHPGVGLVVFTAI 61

Query: 96  DIEARLIGSLSPSPLDGVLSKASTLEIF--------HQELFLSLNGVRQATDRLNNQWYI 147
           D    +I SL    +  + SK    +           +E +LS        +   +    
Sbjct: 62  D-NPGVIRSLLSKHISCIFSKRDHADEMPAAVRAAKSEEAYLSPVIASIVRESKTDAPTS 120

Query: 148 NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           N+   L+P E E++R    G ++ +IA +L+R+ +TI + K N M K+ +  +  L++ A
Sbjct: 121 NRGLALTPRELEVVRLFVSGLTINEIAARLRRSKQTISSQKNNAMRKMSIKRNIDLIKYA 180


>UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1
           Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL
          Length = 216

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 67/205 (32%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L +   +    I+ + R         H   + E    A+       V+          
Sbjct: 4   VVLADDHRLIRQAIDGMLRDIPDIQIVAHA-ENAEHAVAAVREQEPDVVLMDLQMPGMG- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  +  L    P+   + +           +L      G + K +  +   + +   
Sbjct: 62  --GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGA-KGYVHKGADRDELIEAIRSV 118

Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G R     +     +N            L+P E E+L  +  G   T IA+ L  + K
Sbjct: 119 YLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLSPK 178

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  ++  +  +LGV +DA L   A
Sbjct: 179 TVSTYRSRIFERLGVRNDAQLTRIA 203


>UniRef50_C4KLT2 DNA-binding response regulator, LuxR family n=25 Tax=Burkholderia
           RepID=C4KLT2_BURPS
          Length = 221

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 86/217 (39%), Gaps = 12/217 (5%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M +  +  R V + +   +    +        G  + + + +S ++   AM       V+
Sbjct: 1   MSNVALHTRKVVVADDHPIVLRAVTDYVNSLPGF-HVVASVSSGDALLSAMREQEVNLVV 59

Query: 61  FSFSA-MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
             F+    ++ ++GL  ++ L   + RT  +V       + +I  L    + G++ K   
Sbjct: 60  TDFTMHQANDDKDGLRLISHLMRAYERTPIIVFTML-TNSGVISQLCRMGVAGLVGKEEE 118

Query: 120 LEIFHQELFLSLNGVRQ-----ATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSM 170
           +    +       GV Q        RL     I         L+P E E++R  + G S+
Sbjct: 119 IAELGRVCVSVARGVSQSLSPGMAHRLAAVGSIRPGEAAFNALTPKELEVVRLFTGGMSL 178

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           T IA  L R++ T+   K + M KL V ++  L+  A
Sbjct: 179 TDIARTLNRSLGTVSTQKRSAMRKLHVDTNVDLINCA 215


>UniRef50_B5JP13 Sigma-70, region 4 family n=1 Tax=Verrucomicrobiae bacterium DG1235
           RepID=B5JP13_9BACT
          Length = 211

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 87/212 (41%), Gaps = 13/212 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V LIE  ++     ES+ R   G    +  Y   E    A   +    VI        ++
Sbjct: 3   VVLIEDQILFRELTESIVRTDFGLD-VVGQYDDGEEGLQACLDLQPDLVILDLKI---KK 58

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------I 122
             GL+    +  + P  + + +        ++ +     ++G+++K S++E        I
Sbjct: 59  LGGLTVFNRIKDRTPECKVI-LVSAHFTPEIVKNTVERGVNGLVTKNSSIESLKDAIGQI 117

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
               ++ S    +     + N+ Y +  + L+P E ++L+ +  GYS  +IA     +++
Sbjct: 118 LKGAVYYSPEAYKLLRQPITNKDYNDSLKMLTPRETDVLQMVGEGYSSKEIARSFNLSVR 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           TI AH+ N+M KL +     +   A  L  + 
Sbjct: 178 TIDAHRSNIMRKLNLRGATDMTRLAVKLKLVS 209


>UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4
           Tax=Streptomyces RepID=D1XHI5_9ACTO
          Length = 222

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 78/223 (34%), Gaps = 21/223 (9%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +   GI  L     G    +      +     ++  +   V+      R  R +
Sbjct: 3   VADDQAIVREGIVMLLGLLPGIE-VVGAAKDGDEAVALVAEKAPDVVLMDL---RMPRCD 58

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE--------IFH 124
           G+     +  + PRT+ +V+     +  L  +L      G L+K +  E        +  
Sbjct: 59  GVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGA-RGYLTKDARGEEIVQAIDAVMS 117

Query: 125 QELFLSLNGVRQATDRLNNQWYINQS--------RTLSPTEREILRFMSRGYSMTQIAEQ 176
            E  LS    R+  +R+     +             L+P E E+L  ++ G S  +IA  
Sbjct: 118 GEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIARA 177

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
           L  +  T++ H  N+ +K G       +  A      R   TS
Sbjct: 178 LHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPRTS 220


>UniRef50_B4CYR7 Two component transcriptional regulator, LuxR family n=2
           Tax=Verrucomicrobia RepID=B4CYR7_9BACT
          Length = 212

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 73/205 (35%), Gaps = 16/205 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            ++++E   +   G   +  +  G    +  Y S E+    + +     V+   +     
Sbjct: 4   TLSIVEDDPVIRAGWVKIINRSTGYRC-ISDYGSAEAALAGLVKEPPDFVLMDINLPG-- 60

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH----- 124
            + G+ C  EL  + P+   +++   D    L  +L       +L + S   +       
Sbjct: 61  -KSGIECTRELKRRLPKLEIVMLTMFDDRDNLFEALRAGASGYLLKRTSPAGLLEALNQL 119

Query: 125 --QELFLSLNGVRQATDRLNNQWYINQS-----RTLSPTEREILRFMSRGYSMTQIAEQL 177
                 +S    RQ            ++       LS  E EILR ++ G    +IA+QL
Sbjct: 120 KAGGSPMSPQIARQVVHFFRQNEPAAEANGAVIEKLSARENEILRCLAEGRHYKEIADQL 179

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAG 202
             ++ T+R +      KL V S   
Sbjct: 180 NLSMDTVRTYIRRTYEKLHVHSRTE 204


>UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH
           LuxR domain; higly similar to B. subtilis
           Transcriptional regulatory protein degU (Protease
           production enhancer protein) n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RA82_CUPTR
          Length = 223

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 77/201 (38%), Gaps = 8/201 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++       G+  L  +  G    +    S E       R +   V+          
Sbjct: 7   VLLVDDHPFVLDGVR-LRLEATGEMTVIGQAASVEEAIVLAGRHAPDLVVSDIHMP---D 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL      A +FP  R + ++       +  + +      VL +A   E+      ++
Sbjct: 63  ANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAFALGVAAYVLKEAPAHELVTAIRTVA 122

Query: 131 LNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
             G     +       ++   +  R L+P E  +L+ ++ G S  +IAE+L  +++T+  
Sbjct: 123 AGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRTVET 182

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           H+ ++  KL V   A L++ A
Sbjct: 183 HRLHLRRKLRVGGRAELVKYA 203


>UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1
           Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO
          Length = 210

 Score =  123 bits (308), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 79/205 (38%), Gaps = 12/205 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G+  +  +       +   T+ +     +       V+   S      
Sbjct: 4   IIIADDHTIFREGLRQILAEANDFT-LVGEATNGDDLLVRLREAPCDIVLLDLSMPGISG 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF------- 123
              +    E+A      R +V++  +    ++ +L       V   +++ ++        
Sbjct: 63  ITLVRAAREIAGAH---RIIVLSMHEEHQYVVEALKAGADGYVTKNSASDQLIAAIRKVS 119

Query: 124 HQELFLSLNGVRQATDR-LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             ELF+S    ++A  R +           L+  ERE+   +  G+ +++IA  L  +IK
Sbjct: 120 QGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDLSIK 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  HK N+++K+   + A L+  A
Sbjct: 180 TVSTHKTNLLAKMDAETTADLVRYA 204


>UniRef50_Q7NWW0 Probable two-component response regulator, LuxR family n=1
           Tax=Chromobacterium violaceum RepID=Q7NWW0_CHRVO
          Length = 222

 Score =  122 bits (307), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 86/199 (43%), Gaps = 4/199 (2%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +  +G+E    +           T QE             ++  FS    E 
Sbjct: 17  VGLVDDHPIILLGLEQFLSQQMDIELVFSVSTIQEYLIRVKDSAPCDVLVIDFSMP-DEA 75

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           ++G + L  +A +  R  ++++    +    I       +  ++ K  +     + +  +
Sbjct: 76  KDGFAWLR-VAQETARNAKIILFTSQLYLTKICQGKNVGVCEIIYKGDSQLALLESIRTA 134

Query: 131 LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFN 190
            +   +    + +     ++  L+  E E+L +++ G S+++IA + +R+IKTI   K +
Sbjct: 135 ADIEGRVKPEMES--CDKEANRLTKKEWEVLLWIAEGMSVSEIASKKQRSIKTISTQKRS 192

Query: 191 VMSKLGVSSDAGLLEAADI 209
           VM KLG+ +D GL+   ++
Sbjct: 193 VMKKLGIKNDFGLMSYLEL 211


>UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC
           23134 RepID=A1ZEE6_9SPHI
          Length = 213

 Score =  122 bits (307), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 81/207 (39%), Gaps = 17/207 (8%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR-ISFAAVIFSFSAMRSERR 71
           ++E   +   G++ L  K+A        +   +   D +++      V+   +       
Sbjct: 6   IVEDHTIVRQGLKQLLAKYAEMKVLAE-FGVPDQIMDNLAKGERPDIVLCDINLPGM--- 61

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +GL+   ++  K+P  + +++     E  ++ +   +  DG   K +        +    
Sbjct: 62  DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKA-FDAGADGYFHKDTEESELIMGIKKIY 120

Query: 132 NGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
           NG +     ++           N        TL+  E+E+L  +  G    +I ++L  +
Sbjct: 121 NGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKLCIS 180

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            +T+  H+ N++ K G+ +   L++ A
Sbjct: 181 TRTVENHRANILRKFGLKNTVELVKFA 207


>UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2
           Tax=Roseiflexus RepID=A7NIZ3_ROSCS
          Length = 230

 Score =  122 bits (307), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 82/202 (40%), Gaps = 14/202 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   ++  G+ ++     G    +    +  +  D ++R     V+          
Sbjct: 16  VLIVDDHELARAGLAAVLACEPGIE-VVGEADNGAAALDFVARHPVDLVMMDLQMP---V 71

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
            +G+     +    P    +++        L+ +L       +L  AS  E       + 
Sbjct: 72  IDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAGVAGYLLKDASRREIIGAVRQVL 131

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
             E FL+ + V Q   RL +    + +     L+P E+++LR + +G +  +IA +L  +
Sbjct: 132 RGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNREIARELIIS 191

Query: 181 IKTIRAHKFNVMSKLGVSSDAG 202
             T++ H  ++++KLGVS    
Sbjct: 192 PGTVKVHVEHIIAKLGVSDRTQ 213


>UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67MG8_SYMTH
          Length = 197

 Score =  122 bits (307), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 65/166 (39%), Gaps = 15/166 (9%)

Query: 54  ISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGV 113
           +    VI   S        G+     +    P TR + +   + E  ++  L       +
Sbjct: 27  LKPDVVIMDISLP---DMSGIEATRLIKEAVPETRVIGLTMHEEEPFVLEFLRAGADAYI 83

Query: 114 LSKASTLE-------IFHQELFLSLNGVRQATDRLNNQWYI-----NQSRTLSPTEREIL 161
           + +++  +       +   +  L     R   +   ++         +   L+P EREIL
Sbjct: 84  VKRSAAADLVGAIRAVMEGQAVLDPAVTRAVVEGYVSRPGRAVGQPEEPCPLTPREREIL 143

Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++ G +  +IA +L  + KT++ H+ N++ KLG+     L+  A
Sbjct: 144 VLIAEGLTNAEIARRLYISEKTVQTHRSNMLDKLGIHDRTELVRYA 189


>UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1
           Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH
          Length = 214

 Score =  122 bits (307), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 77/201 (38%), Gaps = 8/201 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + L++   +   G   L  + +   +++    S ES   A +R  F  V+   S     
Sbjct: 11  TLLLVDDHAVVRAGYRRLLEQAS-RCWQVTEADSGESAYRACARERFDVVVMDISLPG-- 67

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  L  L  + P  R L+ +  + E             G ++K+S  E+  + +  
Sbjct: 68  -ISGLETLARLQRRAPEIRVLIFSMHE-EPVFAEQALSGGAAGYITKSSAPEVLVEAVQR 125

Query: 130 SLNGVRQATDRLNNQWYINQS---RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
              G       +  +     +   ++LS  E EI R ++ G    +IA  L  + KT+  
Sbjct: 126 IAAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLNISYKTVAN 185

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           +   +  KL +++ A +   A
Sbjct: 186 YGSGIREKLALNNVAEMTRLA 206


>UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TQ52_9BACT
          Length = 214

 Score =  122 bits (307), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 82/205 (40%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   +   G+++L  +             +E+   A   I     +      +   
Sbjct: 5   ILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEALSIA-GEIRPDVTVMDVMMPQM-- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IF 123
            +G+     +      +R + ++     + +   L    L  +L   ++ E       + 
Sbjct: 62  -DGIEATRRIVEDG-SSRVVALSMYADRSFVSEMLKVGALGFLLKDCASTELVEAVRKVM 119

Query: 124 HQELFLSLNGVRQATDRLNNQWY-INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             E++L  +          +  +  +    L+P E+EIL  ++ G +  ++AE+L  +IK
Sbjct: 120 DGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHLSIK 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  H+ ++M+KL + + A L++ A
Sbjct: 180 TVGTHRQHIMNKLKLKNLADLVKYA 204


>UniRef50_B4CYJ9 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4CYJ9_9BACT
          Length = 219

 Score =  122 bits (307), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 76/214 (35%), Gaps = 14/214 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +K  V ++E   +   G+  L  +              +    A+ +     ++      
Sbjct: 6   QKARVLIVEDHEIFREGLAQLINRQPDF-MVCGECDDPKGIAAAIEKAEPDVLLLDLML- 63

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH-- 124
                 G+  + +L   FP+ R LV++  D       +L    L  V+ + ++ ++    
Sbjct: 64  --HGAGGIDLIKQLHTLFPKVRILVLSMHDETVFAPRALRAGALGYVMKQEASGQVLAAL 121

Query: 125 -----QELFLSLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQ 176
                 EL +S         R      ++ +     LS  E  +   +  G    +IA +
Sbjct: 122 RAVVVGELHVSRKVGITLMQRAIKMPELSAADGVAKLSDRELHVFELIGAGIPTREIATR 181

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           L  +IKT+  H+ N+  KL + S   L+  A   
Sbjct: 182 LGISIKTVETHRENIKHKLELQSGTELVTRAKEW 215


>UniRef50_C6Y109 Response regulator receiver n=1 Tax=Pedobacter heparinus DSM 2366
           RepID=C6Y109_PEDHD
          Length = 224

 Score =  122 bits (307), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 79/210 (37%), Gaps = 15/210 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           N+ L E   +   GI+ L                 ++ +      S   ++   +     
Sbjct: 11  NLLLAEDHNVVRSGIKKLLEADEAINIVAEAINGAQALELIRDNGSIDLLLTDLNMPG-- 68

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+S ++E+    P  + ++++  D E  +  +        +L      E+     ++
Sbjct: 69  -INGISLISEVKNFNPNVKVVILSMHDDEKYVAQAFQAGASGYLLKNVDAEEMLFALKYI 127

Query: 130 SLNGVR-----------QATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQL 177
           S  G             +   R+N+   + ++    S  E EIL  ++ G +  ++A++L
Sbjct: 128 SRGGSYICAALSMSMLSKVLKRINSTVAVAETAIDFSSREIEILELIAEGLTNQEMADRL 187

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             + +T+  H+ ++  K G  + A L+  A
Sbjct: 188 FISKRTVEGHRQSLTDKTGCRNTAALIRYA 217


>UniRef50_A4TJY3 Two-component response regulator n=27 Tax=Yersinia
           RepID=A4TJY3_YERPP
          Length = 210

 Score =  122 bits (307), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 82/208 (39%), Gaps = 11/208 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           ++V +++      + I +L  +         +    E+ +  +       VI        
Sbjct: 3   KSVMIVDDHPAIRVAIHALLSQSKEFSTISESVDGSEALEK-LKNNPVDLVIIDIELP-- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE------- 121
              +G S L +L  +    + L ++  + +   + +L       +       E       
Sbjct: 60  -NFDGFSLLKKLQQRGFTGKSLFLSAKNEQVFAVRALQAGANGFISKNKDISEILFAAQN 118

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           +     F     + Q   + ++   +N++R LS  E  +LR++  G S  QIA+++  + 
Sbjct: 119 VLRGYSFFPSETLTQLAGQPSSHDPVNRARLLSEREINVLRYLVNGLSNKQIADEMFISN 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           KT+  +K  +++KLG+SS   L + A  
Sbjct: 179 KTVSTYKTRILTKLGLSSVIELADYAHT 206


>UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=52 Tax=Bacilli
           RepID=A4VZN8_STRS2
          Length = 213

 Score =  122 bits (306), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 82/201 (40%), Gaps = 8/201 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   M  +G++S                 +E    A+  +    V+         +
Sbjct: 6   VMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALE-VKPDVVVMDLVMP---K 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+     L  ++P+ + +++       ++   L       +L  +S  EI      ++
Sbjct: 62  MTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGARGYMLKTSSADEILAAIRKVA 121

Query: 131 LNGVRQATDRL----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
           L      T+      +++ + +    L+  EREIL  +++GY   +IA++   ++KT++ 
Sbjct: 122 LGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFISLKTVKT 181

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           H  N++SKL VS     +  A
Sbjct: 182 HVSNILSKLAVSDRTQAVVYA 202


>UniRef50_A4CPM8 Regulatory protein, LuxR:Response regulator receiver n=4
           Tax=Flavobacteria RepID=A4CPM8_9FLAO
          Length = 226

 Score =  122 bits (306), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 89/217 (41%), Gaps = 13/217 (5%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
              + K  NV + +   +  +GI+ +  +  G+   L    +  +    +S+ +   +I 
Sbjct: 12  IDKQTKMINVLIADNHPVVRLGIKQVL-ENDGDIQVLGDVGTTTALFQMLSKATPDVLIL 70

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
                      G++ L ++  ++P  + L+ +    +   + ++      G LSK++ L 
Sbjct: 71  EMDIPE---INGIATLRKMKDEYPEVQVLIYSGQSEDVYALSTIRAGA-RGYLSKSAELS 126

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQS--------RTLSPTEREILRFMSRGYSMTQI 173
                +    +G    T+ L  +   ++         R LS  E E+L+ ++ G    ++
Sbjct: 127 YLADAVHKVSDGGMFITNELAQRLAFDEGTQKPRRFFRKLSTREVEVLKMLASGKRNKEV 186

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           A  L  N KT+  +K  +M KL V +   LL+ A  L
Sbjct: 187 ALGLNLNEKTVSTYKARLMKKLNVDNMVDLLQQAKAL 223


>UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2
           Tax=Flexibacteraceae RepID=C6W5G0_DYAFD
          Length = 219

 Score =  122 bits (306), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 80/217 (36%), Gaps = 18/217 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    + + +   +   G  S+        + L     QE      +      V      
Sbjct: 1   MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQELLDRLPANTP-DIVFMDLQM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI--- 122
                 +G+        +FP  + +V++  + +  +I  L       +L   S  E+   
Sbjct: 60  P---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKGVQGYLLKDTSPDEVEKA 116

Query: 123 ---FHQELFLSLNGVRQATDRLNNQWYINQ--------SRTLSPTEREILRFMSRGYSMT 171
               H+E F   + V +A  R      +N+        +  LS  E+E+L+ +  G S T
Sbjct: 117 IRRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLSTT 176

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           +I ++L  +++T+  H+  V+ K G  S A  +  A 
Sbjct: 177 EIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAY 213


>UniRef50_C6VTJ6 Two component transcriptional regulator, LuxR family n=2
           Tax=Sphingobacteriales RepID=C6VTJ6_DYAFD
          Length = 207

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 11/211 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V +I+   +   G+++L     G       +   +S   A+       ++   +     
Sbjct: 2   DVFIIDDHPIVLQGLKNLLESREGIR-VTGIFDQADSALAALDSHIPEVMLMDINLP--- 57

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G++   ++    P  R + ++    E  +I S+  S   G + K +  +     L  
Sbjct: 58  DISGVTLCQQVKQAHPEIRVVALSIH-NERSVIMSMLQSGASGYVLKNAIGDDIVAALQA 116

Query: 130 SLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           ++ G                     +   L+  E+EIL  + +GY+  QIA +L  +  T
Sbjct: 117 AMEGQIYLCAETQKALNEAPGTEPKEIPRLTRREKEILELIGQGYTTQQIAAELFISTHT 176

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           + +H+ N+  K GV + A ++  A  L  MR
Sbjct: 177 VESHRKNLKEKFGVPNTATVVRMAAELGLMR 207


>UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderia RepID=Q13QW9_BURXL
          Length = 220

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 79/211 (37%), Gaps = 18/211 (8%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR---ISFAAVIFSFSAM 66
           +V L++   +   G   L    A     +H          A  R   +    V+   S  
Sbjct: 7   SVLLVDDHAVVREGYRRLLELNAD----VHVCGEAADAAQAYQRFCALRPDVVVMDVSLP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+  +  +  + P  R L+ +  +    +  +L    L G ++KAS  ++  + 
Sbjct: 63  G---ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGAL-GYVTKASAPDVLVEA 118

Query: 127 LFLSLNGVRQATDRLNNQWYIN-------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +          +  ++    +          R LS  E E+LR + +GY++  IAE+L  
Sbjct: 119 VRTIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGL 178

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           + KT+  H+  +  K G  +   L + A  L
Sbjct: 179 SQKTVANHQSVIRQKFGADNGVQLAQMASRL 209


>UniRef50_Q4KCH2 DNA-binding response regulator, LuxR family n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4KCH2_PSEF5
          Length = 208

 Score =  122 bits (305), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 80/206 (38%), Gaps = 13/206 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           ++V +++   +    I             +       S  + +  +    VI   S    
Sbjct: 3   KSVLIVDDHPVVCEAIRKTLESQGYT--IVGETADGISALNMILSLRPDIVILDVSL--- 57

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
           E+ +GL+ L  +A      R LV     ++   +  L      G +SK   L    + + 
Sbjct: 58  EKMDGLTVLKRIAQANLDVRVLVFTAQSVDTYAMRCLQAGA-SGFVSKNEPLTKLLKAVD 116

Query: 129 LSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             + G      +          +   +    L+  E E+L+ ++ G +  +IAE+L  + 
Sbjct: 117 TIVEGYVFFPKKSMPFSDGGRGKHSSDVLAALTNRELEVLKLLAEGLTNLEIAEKLHLSN 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  HK N++SKLGV+S   L+  A
Sbjct: 177 KTVSGHKINILSKLGVTSVVDLVNIA 202


>UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderiaceae RepID=Q1LE49_RALME
          Length = 264

 Score =  122 bits (305), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 86/213 (40%), Gaps = 17/213 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V ++E   +   G+ S+     G          +E+ Q A+S      ++   S     
Sbjct: 6   SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLCP-DLILMDLSLPGM- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL-- 127
              G+  +  +  + P  R + ++    +  +  +L    +DG + K ++ +     +  
Sbjct: 64  --NGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRA-GVDGYVLKDTSFDDLVTAMRV 120

Query: 128 ------FLSLNGVRQATDRLNNQWYINQSRT----LSPTEREILRFMSRGYSMTQIAEQL 177
                  LS        +   +   ++ ++T    L+  ER +L+ ++ G S  Q+   +
Sbjct: 121 VLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYM 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
             + KTI  ++ ++M KLG+++   L+  A  +
Sbjct: 181 NLSPKTIEKYRASLMRKLGITNLTELVLIAISM 213


>UniRef50_B2JLH9 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia phymatum STM815 RepID=B2JLH9_BURP8
          Length = 219

 Score =  122 bits (305), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 12/207 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA-MRSE 69
           + + +   +    +        G        +  E     +S+  +  +I  F+      
Sbjct: 9   IVIADDHPVIRHAVIHALNGLPGFTVDAAVKSGAE-LLGVLSQGKWDLIITDFTMDTGKS 67

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +GLS + +L  + P    +V    + +  L   LS S + GV+ K   +E F      
Sbjct: 68  ETDGLSLIGQLCRQHPDVPVVVFTMLNNDDMLAR-LSRSGVAGVVDKCEGVEEFRSAALE 126

Query: 130 SLNGVR-----QATDRLNNQWYINQSR----TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            ++  R     +   RL +  + N  R     L+  E E++R  + G S+T IA  L R+
Sbjct: 127 VMHHRRPYFSAKIRMRLQHLNFGNGRRGGEPALTKKELEVIRLFASGASLTDIARHLNRS 186

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + TI   K   M KL + ++A L++ A
Sbjct: 187 LSTIATQKSAAMKKLYLQTNADLVKYA 213


>UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4
           Tax=Firmicutes RepID=C6CZA5_PAESJ
          Length = 221

 Score =  122 bits (305), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 13/208 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFSFSAMR 67
           V +++   M   G+ +               + Q +     + +       ++       
Sbjct: 9   VMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMDLMMPG 68

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF---- 123
               +G+    +L +++P  + +++     + ++ G++    +  VL   S  E+     
Sbjct: 69  M---DGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEELIYALH 125

Query: 124 ---HQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                   ++ +  +  T  L  +   +    L+  E+E+L  ++ G S  +I E+L  +
Sbjct: 126 GAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGEELHIS 185

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           +KT++ H  N++ K  +     L   A 
Sbjct: 186 VKTVKTHVSNLLMKCELEDRTQLAVLAH 213


>UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM
           2246 RepID=UPI00016C48EF
          Length = 220

 Score =  121 bits (304), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 9/205 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + +  + L +  V+   G+ +L          +    S     D +       +    S 
Sbjct: 1   MPRTRIVLADDHVILREGLRALISAQPDLE-VVGEAASGTETVDCVRATEPRVLCLDLSM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                   ++ +T+LA   PRTR LV+   +  A +  +L+       L K +       
Sbjct: 60  PGWGSATTITRVTQLA---PRTRVLVLTMHNDPAYVRSALAAGAAGYFL-KTTPSPDLLA 115

Query: 126 ELFLSLNGVR----QATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            +     G R       D L       +   LS  E E+L  + +G +  +IA+QL  ++
Sbjct: 116 AIRAVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSV 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA 206
           KT+  ++  +  K G+ + A  +  
Sbjct: 176 KTVETYRARLREKTGLKTRADYVRY 200


>UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16
           Tax=Rhizobiales RepID=Q07TZ6_RHOP5
          Length = 237

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 89/231 (38%), Gaps = 18/231 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           ++HS   +  V + +   +   G+++L                  + + A+  +     +
Sbjct: 13  IKHSSPSRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAID-LDPDVAV 71

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
           F  S        G+  + +L    P  R LV++  +  A L   L       +L +++T 
Sbjct: 72  FDLSMPG---LNGIEVIQKLFAVRPHARVLVVSVHEDGANLRRLLKMGVAGYILKRSATE 128

Query: 121 EIFHQELFLSLNGVR-----------QATDRLNNQWYINQSRTLSPTEREILRFMSRGYS 169
           E+      ++  G+            +     ++         LS  E+E+L+  + G+S
Sbjct: 129 ELVRGIHAVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGHS 188

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
              I+ +L+   K++  +K   M KLG +S   L+  A   L M   E++N
Sbjct: 189 NKVISAKLEVGPKSVETYKARAMEKLGFTSRVDLIRFA---LSMGWLESTN 236


>UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG
          Length = 210

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 80/204 (39%), Gaps = 13/204 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G++ +                +E      +   +  VI   +      
Sbjct: 5   ILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKELLNKIQAN-DYDMVILDITMPG--- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
           R GL  LTE+    P+   LV++    E   + +   S   G L+K S        L   
Sbjct: 61  RNGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRA-YKSGAAGYLNKGSASNELLDALHKI 119

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                ++S          L++    +  ++LS  E +++  ++ G ++ +IA +L  ++K
Sbjct: 120 SMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLSVK 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           T+  ++ +++ KL + ++A L   
Sbjct: 180 TVSTYRAHILRKLNMKNNAELTRF 203


>UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3
           Tax=Clostridia RepID=Q2RJU9_MOOTA
          Length = 222

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 79/215 (36%), Gaps = 16/215 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           + I+K  + + +   +   GI  +              T QE+ +    R     +I   
Sbjct: 2   TDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEAIE-MTRRYQPQVIIMDI 60

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           +        G+     +  ++P+   L +   D E  +I  L  S + G + K  + E  
Sbjct: 61  NMPG---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIE-LLRSGVSGYVLKDISAEEL 116

Query: 124 HQELFLSLNGVRQATDRLNNQWYINQSR-----------TLSPTEREILRFMSRGYSMTQ 172
            Q ++    G R     +  +      +            L+  EREIL  +S G S  +
Sbjct: 117 VQAVYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNRE 176

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           IA +L  + KT++ H  ++  K+GVS        A
Sbjct: 177 IARELFISEKTVKNHLTHIFHKIGVSDRTQAALYA 211


>UniRef50_A3HV51 Two-component response regulator n=1 Tax=Algoriphagus sp. PR1
           RepID=A3HV51_9SPHI
          Length = 214

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 86/203 (42%), Gaps = 14/203 (6%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           L++   +   GIE L          L  +T+ +S Q+ +S  +   +I   S       +
Sbjct: 8   LVDDHPIVMEGIEMLL-LEIPEIQLLGKFTNGKSAQEFLSVTAVDLIITDISMPE---LD 63

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           GL     +    P T+ ++++  D +  +   +     +G L K +T E     +   L+
Sbjct: 64  GLQLTKWVKQNHPETKVIILSMHDNDHYVQEIILADA-EGYLLKENTSEELVNAVNRVLD 122

Query: 133 GVRQATDRLNNQWYINQS---------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
                +D++  +   N           ++LS  E ++L+ + +  +  +IA++L  +  T
Sbjct: 123 DGIYYSDQIVGKLRSNFQLQNKKHEILQSLSERELDVLQLIIQELTTQEIADKLFISRHT 182

Query: 184 IRAHKFNVMSKLGVSSDAGLLEA 206
           + +HK N+  K   +S  GL++ 
Sbjct: 183 VESHKKNLFKKTDQNSLVGLVKF 205


>UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2
           Tax=Acidobacteria RepID=Q021D5_SOLUE
          Length = 210

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V L++   +   G   +                 ++ Q A   +    V+  F+     
Sbjct: 7   SVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQAVQLA-GELHPRVVVMDFAMPSM- 64

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G      +    P T  L+++    EA  + +   + + G L K +        +  
Sbjct: 65  --NGAVAARHILRTAPETAILILSMH-AEASYVRTCLEAGVRGYLLKNALDLEMVAAVKQ 121

Query: 130 SLNGVRQATDRLNNQWYIN--QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
              G +    RL      +      L+  E E+L+ +  G S  +IA  L  +  T+  H
Sbjct: 122 VAAGKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTVAVH 181

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
           + N+M  LG+ + A L+  A
Sbjct: 182 RANIMQTLGIHNTAELVVYA 201


>UniRef50_A6GQJ8 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Limnobacter sp. MED105 RepID=A6GQJ8_9BURK
          Length = 207

 Score =  121 bits (304), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 80/207 (38%), Gaps = 13/207 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + +++  ++   G+  +  +F G  Y              + + +F AV+   +      
Sbjct: 3   ILIVDDHMIIRRGLVQILDEFDG-QYHSEQAADGVEAMQKLRKDNFDAVLLDVAL---GE 58

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
           R+G   L  +  +FP+   ++++        + ++     +  L+K  +     Q L ++
Sbjct: 59  RDGFDVLKSVRSEFPKLGVVMLSVYPEAQFALRAIRSGA-NAYLNKGCSPAELTQALQMA 117

Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G    T    N    +            LS  E ++LR M++G ++  IA+ L  +  
Sbjct: 118 CAGQVYLTPATANLMANDLRKPADRPPHERLSNREMQVLRLMAQGETVQHIAQALCLSGN 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209
           T+  ++  V  KL + +   L+    +
Sbjct: 178 TVSTYRARVFEKLELKNLVDLVNYTKL 204


>UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60
           Tax=Betaproteobacteria RepID=Q39C19_BURS3
          Length = 271

 Score =  121 bits (303), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 85/225 (37%), Gaps = 15/225 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           N+ L++   +   GI  L     G    +    +      A+ +  F  ++   S     
Sbjct: 4   NILLVDDHAIVRQGIRQLL-IDRGVARDVTEAENGGDAVAAVDKQEFDVILLDISLP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSK--------ASTLE 121
              G+  L  L  K PRT  L+ +    +   + +L      G LSK         +  +
Sbjct: 60  DTNGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAA-GYLSKTVNAAQMIGAIQQ 118

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           +     ++S        + ++ +        LS  E + L  ++ G  +T IA  L  ++
Sbjct: 119 VAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLSV 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEA--ADILLCMRHCETSNVLHP 224
           KT+  ++  ++ K+ +S++A L     ++ L+ M     +    P
Sbjct: 179 KTVSVYRSRLLEKMRLSNNAELTFYVMSNRLVDMAPTAGAGSSRP 223


>UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7
           Tax=Verrucomicrobia RepID=B9XC41_9BACT
          Length = 267

 Score =  121 bits (303), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 79/219 (36%), Gaps = 17/219 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           + H  +    V L +   +   G+ +L              T +E+ Q A  +++   ++
Sbjct: 23  LTHKSMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREAVQMA-QKLTPDVIL 81

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +        GL    ++A   P  + LV++    E   +  L+ +   G L K +  
Sbjct: 82  MDIAMPLM---NGLEATRKIAEVAPSAKVLVLSSY-GEDDYVQKLTEAGASGYLIKHAAA 137

Query: 121 EIFHQEL--------FLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGY 168
                 +        F S    ++  D++     N      S  L+  E E L  +  G 
Sbjct: 138 NDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGK 197

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
               IA  +  +IKT+  H+  VM+KL +   A L   A
Sbjct: 198 PNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYA 236


>UniRef50_B1T388 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia ambifaria MEX-5 RepID=B1T388_9BURK
          Length = 210

 Score =  121 bits (303), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 86/209 (41%), Gaps = 10/209 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
              +I+   +   G E++ R+  G    + +Y        A+       +   F  + ++
Sbjct: 5   TAMVIDDHYLVRQGFEAVARRIPGLS-IIGSYERSRDLIAAIELCPPQVLYLDF-VLHTD 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL+ +  +  +FP  + +V++       +  S+      G   K S++    +    
Sbjct: 63  DVGGLTLIRLIKRRFPIVKIIVVSAHANAGIVSLSIRAGA-SGFCFKTSSVSDLTEATSR 121

Query: 130 SLNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            L G       V +     +     +    L+P ERE++  +  G S++ I+++L R+ K
Sbjct: 122 VLGGKVYIPKFVDECAVNRDLNDRPDAFEILTPREREVVNLILIGMSISDISKKLVRDRK 181

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           TI  HK     KLGVSSDA L     +L+
Sbjct: 182 TISGHKQTAYRKLGVSSDAELFSIKHLLM 210


>UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria
           RepID=A5F1Q5_VIBC3
          Length = 216

 Score =  121 bits (303), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G  +   +              E+ +          V+   S      
Sbjct: 11  VVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEALELVKLHQP-DVVLMDVSMP---I 66

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+     +  + P T+ L++   D    ++  +    +  +L + S L+   Q +   
Sbjct: 67  MNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISALK-MVQAIKTV 125

Query: 131 LNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             G     +   +  +        N+   LS  E  ILR +++G S  +IA  L  + +T
Sbjct: 126 HQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKIATLLNISYRT 185

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  H+ N+  KL + S A L + A
Sbjct: 186 VETHRQNIKHKLDIHSTAELAQYA 209


>UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio
           RepID=C9QDP7_VIBOR
          Length = 209

 Score =  120 bits (302), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 81/202 (40%), Gaps = 12/202 (5%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           L +   +   G++S   +           T  E+ +  +  +    ++   +        
Sbjct: 6   LADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLE-LKPDVLLLDINMP---NLN 61

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE-------IFHQ 125
           G+  L +LA     T  ++++  D    ++ S+       VL    + E       +   
Sbjct: 62  GIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGAKGYVLKDVGSEELVMAINQVAQG 121

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
             +L      +  +++ N+    +  TLS  E ++L+ ++ G    +IA+ L  +++T+ 
Sbjct: 122 RSYLCPQASDRLLEQI-NEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISVRTVE 180

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            H+  +  KLG +S A L++ A
Sbjct: 181 THRLRIKKKLGATSTAALVKLA 202


>UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10
           Tax=Proteobacteria RepID=Q1GZT3_METFK
          Length = 215

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 82/205 (40%), Gaps = 13/205 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G++ +  +            + E+ + A ++     V+   S      
Sbjct: 9   VVIADDHAILREGLKQILAETEDIEVVADAKNAAEAIKLAGTK-GLDVVVLDISLP---D 64

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
           R G+     +  + P    L+++    +A  I +L    + G LSK S  +     +   
Sbjct: 65  RSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAV-GYLSKQSASDQLVTAIRTV 123

Query: 128 -----FLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                ++S        D+++         TLS  E + L  ++ G S+++IAE L  ++K
Sbjct: 124 AKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIAENLSLSVK 183

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  ++  ++ KL +  +A L   A
Sbjct: 184 TVSMYRARLLEKLNLRHNAELTHYA 208


>UniRef50_C7PDL7 Two component transcriptional regulator, LuxR family n=1
           Tax=Chitinophaga pinensis DSM 2588 RepID=C7PDL7_CHIPD
          Length = 210

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 12/205 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   + + G+ SLF+   G     HT T+     D ++      ++          
Sbjct: 4   VLIVDDHHLFAEGVASLFKPEDGIAVVKHT-TNGNEIPDILAGSDIDVILLDIDMP---I 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ----- 125
             G++C+  L  K      +++       ++  +L       VL  AS  E+        
Sbjct: 60  LNGIACMELLKHKGYDKPVVMLTMHQSMRQVKDALEKGAQGYVLKDASKAELVQAINNAS 119

Query: 126 --ELFLSLNGVRQATDRLNNQW-YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             + +       Q  D    +    +  + LS  E+EI++ ++ G +   I+  L  +  
Sbjct: 120 ERKNYFHPKINDQVFDYFRGKSVGKSGLQELSEREKEIIKCLAEGMNTKAISSSLYISEH 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T++ H+ N+M KL V + A L+  A
Sbjct: 180 TVKTHRRNIMHKLNVKTSAELIRLA 204


>UniRef50_D0MHE1 Two component transcriptional regulator, LuxR family n=1
           Tax=Rhodothermus marinus DSM 4252 RepID=D0MHE1_RHOM4
          Length = 211

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 82/201 (40%), Gaps = 14/201 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           +AL++   +    I  L      N   + ++ S    Q ++ + +   ++          
Sbjct: 4   IALVDDEAIVRDTIAFLLETTE-NLTLVGSFASAREAQQSLPQCAPDVILVDI---GLPD 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL+ +  L  + P    LV+   D    ++ ++      G L K    E     + + 
Sbjct: 60  ASGLTLIRALRPQLPHAEFLVLTVFDDNQHILEAIQAGA-SGYLLKRDLPEHLISAIRIV 118

Query: 131 LNG--------VRQATDRLNNQWYINQS-RTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             G         R+A +   +Q     + + L+P E+E+L  ++RG S  +IAE+L  +I
Sbjct: 119 HQGGSWMSAGVARRALELFRHQLAPAAALQQLTPREQEVLHLLARGLSNAEIAERLYLSI 178

Query: 182 KTIRAHKFNVMSKLGVSSDAG 202
           +T+R H  ++  KL   + A 
Sbjct: 179 ETVRTHIRHIYRKLQARNRAE 199


>UniRef50_A9APD3 Signal transduction response regulator n=16 Tax=Burkholderia
           RepID=A9APD3_BURM1
          Length = 234

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 5/178 (2%)

Query: 37  KLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDD 96
            +  Y +      A   +    ++  +S     R EGL+ L  L    P    + +  ++
Sbjct: 33  LVAAYPTAAELVAAFDTVDCHVLLVDYSLRGDGRIEGLALLERLTRVRPEVGVVALVRNE 92

Query: 97  IEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT---- 152
               ++ S+       ++SK   +      +  + +G R  +  +      + S      
Sbjct: 93  -SPVILRSILAHGATSIVSKGDDVGHIVTAVHSAYSGGRYLSPLVRRALDASGSEPAPAK 151

Query: 153 LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           LS  E E++R    G  +  IA++L +  +T+ A K + M KLG  +D  L+  A  L
Sbjct: 152 LSSREVEVIRLYLSGIPIKAIAQRLNKGKQTVSAQKISAMKKLGAHNDVELIRYAAGL 209


>UniRef50_B4T4T3 EsrB n=38 Tax=Enterobacteriaceae RepID=B4T4T3_SALNS
          Length = 212

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 83/212 (39%), Gaps = 12/212 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K+  + L++   +   GI +    +       H     E +    +      +I   S 
Sbjct: 1   MKEYKILLVDDHEIIINGIMNALLPWPHFKIVEHVKNGLEVYNACCAYEP-DILILDLSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL  + +L  ++     LV      E   I +L+    +G + K+S+ ++   
Sbjct: 60  PG---INGLDIIPQLHQRWSAMNILVYTAYQQEYMTIKTLAAGA-NGYVLKSSSQQVLLA 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLK 178
            L       R     LN +  + +          L+  ER++L+ +  GY+   I+E+L 
Sbjct: 116 ALQTVAVNKRYIDPTLNREAILAELNADTTNHQLLTLRERQVLKLIDEGYTNHGISEKLH 175

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            +IKT+  H+ N+M KL V     LL  A  +
Sbjct: 176 ISIKTVETHRMNMMRKLQVHKVTELLNCARRM 207


>UniRef50_C1DSJ1 Two-component response regulator, LuxR family n=1 Tax=Azotobacter
           vinelandii DJ RepID=C1DSJ1_AZOVD
          Length = 211

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 81/205 (39%), Gaps = 11/205 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V +++   +   G+  L               S     + + R +F   I   +     
Sbjct: 3   SVLIVDDHQLFRSGLSRLLS-EDRKIAVEGEAASLPQAMEILRRQTFHVAIVDINLAG-- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
            R GL  L+ +   +PR   L+I+          +        +       E+      +
Sbjct: 60  -RSGLELLSRIRHDWPRLPVLMISMYPAAQFSAVAFQKGASGYLSKDVEPGELLRAVKTV 118

Query: 130 SLNGVRQATD------RLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           +  G   A+       ++ ++ + NQ    L+  E +I   +  G  +T+I E++  ++K
Sbjct: 119 AKGGQYDASHPSATPAQVADERFANQPHLRLTDREMQIFNLIVTGARLTEIGERILLSVK 178

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  +K  +M KLGV+++A L++ A
Sbjct: 179 TVSTYKTRIMEKLGVNNNAELIQYA 203


>UniRef50_C6P0R1 Two component transcriptional regulator, LuxR family n=1
           Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P0R1_9PROT
          Length = 222

 Score =  120 bits (302), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 18/219 (8%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS---RISFAAVIFSF 63
           +K  V +++   +   G+  L          LH      + + A+           I   
Sbjct: 9   RKAKVMVVDDHAIIRQGMFMLI----NREPDLHACCEAANIEQAVEVNRACKHDIAIVDI 64

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST---- 119
           S    +   GL  +      FP    L+++  D       +L       ++ + +T    
Sbjct: 65  SL---DNASGLELVRRFQFLFPDLPILILSMHDESIYAEAALKAGARGYLMKQMATDVLL 121

Query: 120 ---LEIFHQELFLSLNG-VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               +I   +L+LS     R     + NQ   +    LSPTE E+L  +  G   ++IA 
Sbjct: 122 HAMRKILQGDLYLSDQMHSRMLKKMMGNQKSDSPVANLSPTELEVLHLVGLGMGTSEIAA 181

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +L R+IKTI +HK N+  KL + S   L   A  L+  R
Sbjct: 182 KLVRSIKTIESHKANIKKKLNLDSGNQLTLFAINLVSSR 220


>UniRef50_Q46SR4 Two component transcriptional regulator, LuxR family n=14
           Tax=Burkholderiales RepID=Q46SR4_RALEJ
          Length = 232

 Score =  120 bits (301), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 9/202 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + +++      + +++   +  G  + L    + ++  + + + +   VI         
Sbjct: 28  TILIVDDHPAVRVVLKTHLSQVLGVTHVLEA-DNGQAAVEIVRQYAPDVVILDLDIP--- 83

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
           R  GL  +  L    P  R LVI+  D       +   +  +G +SK   L    + +  
Sbjct: 84  RINGLDVIPRLKAIQPGVRILVISGQDQNTFAPRA-RQAGANGYVSKTQELPEIVRCVES 142

Query: 130 SLNGVRQATD----RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
            L G     D    R +      +  +LS  E  I++ +++G S  QI E L  + KT+ 
Sbjct: 143 VLAGYSVMPDVDGGRADGVDETRRLGSLSDKELVIMQMLAKGMSNKQIGEVLFISNKTVS 202

Query: 186 AHKFNVMSKLGVSSDAGLLEAA 207
            HK  +M KLG  S   +++ A
Sbjct: 203 THKTRIMEKLGARSLVDVIDFA 224


>UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SMK1_9BACT
          Length = 219

 Score =  120 bits (301), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 16/216 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K  +V +I+   +   G+  +  + A       +          +  I    +I   S 
Sbjct: 1   MKNYSVFIIDDHAVVREGLAMVINQEADME-VCGSADDGPVALQKLFNIEPDIIIVDLSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
             S   +GL  +  +  ++P    LV++  + E         +   G + K+    +  +
Sbjct: 60  TTS---DGLEVIKAIKARYPNIFILVLSMRE-EMVFAERCVRAGASGYVMKSEKPSVIIE 115

Query: 126 ELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
            L   + G    ++++            N    +    L+  E ++ + +  G++  QIA
Sbjct: 116 ALRKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            +L  ++KTI A + ++  KLG+ S   L + A   
Sbjct: 176 TKLNLSVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211


>UniRef50_B0TSG4 Two component transcriptional regulator, LuxR family n=4
           Tax=Proteobacteria RepID=B0TSG4_SHEHH
          Length = 222

 Score =  120 bits (301), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 87/211 (41%), Gaps = 15/211 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +K  + L++  ++   GI SL    A       +    E+     +      +I   S  
Sbjct: 3   EKITIILVDDHILVRAGIRSLLESIANVEVIKESGDGIEALSLLRTHQPT-LLILDISLP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL     +     +T+ L+++       +  +L+     G L K S +E     
Sbjct: 62  G---LNGLEVARSVTKMKTKTKILMLSMHSDVEYVAKALTI-GSHGYLMKESAVEELETA 117

Query: 127 L--------FLSLNGVRQATDRLNNQWYINQS--RTLSPTEREILRFMSRGYSMTQIAEQ 176
           +        ++  N   +  D+L           + L+  +R+IL+ ++ GYS  +IAE+
Sbjct: 118 ISTLINDKQYIGKNIDLEMVDKLRGDSNQESDLIKLLTSRQRQILQLIAEGYSTREIAER 177

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +  +IKT+  H+ ++MS+L +   AGL+  A
Sbjct: 178 MSVSIKTVETHRAHIMSRLNIFDIAGLVRFA 208


>UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus
           sp. BH72 RepID=A1K960_AZOSB
          Length = 209

 Score =  120 bits (301), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 13/204 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V + +   +   G+                  + ++  + +       V+   +      
Sbjct: 4   VLIADDHAVVRGGLRQFLSSTEEFDIVAEA-ANGQTALELVRTSGCDVVLLDITLP---D 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  L  +    P    L+ +    +   + +L+     G L+K S        L   
Sbjct: 60  LNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGA-SGYLNKDSPPAQILAALHTV 118

Query: 131 LNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           + G R  +  L  +                LSP E  +L  +S+G  +T+I EQ   ++K
Sbjct: 119 VAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSVK 178

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEA 206
           TI  ++  ++ KL ++S+A +   
Sbjct: 179 TISTYRARILEKLDLASNAEITRY 202


>UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1
           Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP
          Length = 220

 Score =  120 bits (301), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 14/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L +   M    + +L  +           + +E    A ++     V    +      
Sbjct: 5   ILLADDHQMFRHALRALLARDPELEVVAEAASGEEVLAIADAQ-PVDLVCMDIAMPGM-- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL--- 127
            +G+     L  + P  R + ++       +   L  +   G ++K    +   + +   
Sbjct: 62  -DGIEATRRLLARHPALRVIGLSAFADRQFV-TDLLAAGARGYITKGEAGDELLRAIRTV 119

Query: 128 -----FLSLNGVRQATDRLNNQWYI-NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
                +L         D L +   +   +  L+  ER++L+ ++ G +  QI ++L    
Sbjct: 120 CEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHIAA 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
            T+  H+ N+M KL + + A L   A
Sbjct: 180 STVEVHRRNLMRKLDLHNVAELTRYA 205


>UniRef50_A5FNZ8 Two component transcriptional regulator, LuxR family n=4
           Tax=Bacteroidetes RepID=A5FNZ8_FLAJ1
          Length = 221

 Score =  120 bits (301), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 77/208 (37%), Gaps = 14/208 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR-ISFAAVIFSFSAMRSE 69
           +AL++  V+   GI  L ++             ++     +   I    +I         
Sbjct: 7   IALVDDEVLFRKGIAFLLQREDNIEIVFEASNGEDLVNKLLENEIKPDIIIMDLKMP--- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+     +   FP  + + +   D ++ +   +    +  ++   +  ++      +
Sbjct: 64  VLNGVEATKIIRKSFPEIKIIALTSYDSKSFIANMIQVGAVAYLIKNTTPKDLIKTINEV 123

Query: 130 SLNGVRQATDRLN----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +  G       L           N     ++  LSP E EIL+ + +  + ++IAE L  
Sbjct: 124 NKKGFYYNESVLKTIQETIVSSKNSKGNLETSFLSPREIEILQLICQQKTTSEIAEHLFL 183

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + +T+  H+ N++ K    + AGL+  A
Sbjct: 184 SPRTVEGHRNNLLLKTESRNIAGLVVYA 211


>UniRef50_C7PJC5 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteroidetes RepID=C7PJC5_CHIPD
          Length = 208

 Score =  120 bits (300), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 12/206 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + + +   +   G++++     G        T +E+ + A  +     ++   +      
Sbjct: 4   IFITDDHPIVREGLKNVLNATEGFAVTGTCSTGKETLE-AFEKKEPDILLLDINLP---D 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+     +  K P    + ++    EA +I S+      G + K +  EI  + +   
Sbjct: 60  INGVELCAAVKKKHPDVYVIALSVH-NEAPIINSILRQGASGYIQKNALSEIIVEAIQDV 118

Query: 131 LNG-------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           L G        R+   R   +  + Q   ++  E+EIL+  + G ++ QIAE+L  +  T
Sbjct: 119 LKGGSYVCEQSREILRRQRGKGGLTQLPKMTRREKEILKLAAEGLTIAQIAEKLFISPYT 178

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADI 209
           + +H+ N+M K  V+S A  ++ A  
Sbjct: 179 VESHRKNLMDKFEVNSVAAAIKLAGQ 204


>UniRef50_B1ZN14 Two component transcriptional regulator, LuxR family n=3
           Tax=Verrucomicrobia RepID=B1ZN14_OPITP
          Length = 215

 Score =  120 bits (300), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 79/207 (38%), Gaps = 13/207 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
           + + ++E        +  + R  A       +   Q +    +  +    ++        
Sbjct: 2   KRLVIVEDQTAIREMLVEILRLDANYQLVGESGDGQSALALCLE-VKPDLLVLDAKLPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  L  ++ K    R LV +  +    LI  +  +   G + K + L  F + L 
Sbjct: 60  --LNGVDLLRRISKKLSGMRVLVFSGHE-NPVLIREMLEAGAHGFVEKTAGLFEFKKGLE 116

Query: 129 LSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
              +G             + + N    N +  L+  EREIL+ ++  +S  +IA +L  +
Sbjct: 117 TVASGGTYFGPAVAALLRNVVANPSASNTADFLTDREREILQLVAESHSTKEIAAKLGIS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           IKT+  H+ N+M KL +   A L   A
Sbjct: 177 IKTVDNHRTNLMRKLNLHDVASLTRYA 203


>UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
           17216 RepID=B0MVU6_9BACT
          Length = 216

 Score =  120 bits (300), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+  L  ++ G    +   ++ E F   +       V   F+      
Sbjct: 6   IILVDDHSLFRSGMRGLLDRYDGIR-VVGEASTGEEFLAMLPATEADVVFMDFAMPGM-- 62

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G     +     P  + + ++    E      +       ++  +   E+      ++
Sbjct: 63  -NGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGAKGFLMKDSPMDEVLRAIETVA 121

Query: 131 LNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
             G     + L +           Y      LS  E EIL  + RG S  +IA++L  + 
Sbjct: 122 AGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIADELFISK 181

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           +T+  H+ N++ K G  + A L+  A
Sbjct: 182 RTVDKHRANILEKTGCKNTASLVVYA 207


>UniRef50_B9XH34 Two component transcriptional regulator, LuxR family n=3
           Tax=bacterium Ellin514 RepID=B9XH34_9BACT
          Length = 226

 Score =  120 bits (300), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 13/209 (6%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           EH+ +  + +A++E        +        GN       +++E+     S ++   V+ 
Sbjct: 11  EHADVSTK-IAIVEDNATLRQYLAEFVAGAPGNRCVCACGSAEEALVKIPS-LNPDVVLM 68

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
                      G+ C   L  K P  + +++        +  +L       VL ++   E
Sbjct: 69  DIHLPGE---SGIVCTARLREKLPNLQVIMLTVYKDTKMIFQALKAGACGYVLKRSDDKE 125

Query: 122 IFH--------QELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
           I               S          + +    +++  LS  E+EIL  ++ G S  +I
Sbjct: 126 ILEAIAEVRAGGAPMTSEIARMVVRSFIADTPEKDETGQLSGREQEILALLAEGLSNKEI 185

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202
             +L  +  T+R H  ++  KL V     
Sbjct: 186 GSKLNISFTTVRTHLMHIYEKLHVRCRTE 214


>UniRef50_P31802 Nitrate/nitrite response regulator protein narP n=142 Tax=Bacteria
           RepID=NARP_ECOLI
          Length = 215

 Score =  119 bits (299), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 13/200 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G+  L     G+           +  D  +R+    ++   +      
Sbjct: 9   VMIVDDHPLMRRGVRQLLELDPGSEVVAEAGDGASA-IDLANRLDIDVILLDLNMKGM-- 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  L  L       + +++   D  + +  +L  +  DG L K S  E+  + +   
Sbjct: 66  -SGLDTLNALRRDGVTAQIIILTVSDASSDVF-ALIDAGADGYLLKDSDPEVLLEAIRAG 123

Query: 131 LNGVRQATDRLNN--------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
             G +  ++R+N             +    L+  E ++L  +++G S  QIA  L  + +
Sbjct: 124 AKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQ 183

Query: 183 TIRAHKFNVMSKLGVSSDAG 202
           T++ H  N++ KL V S   
Sbjct: 184 TVKVHIRNLLRKLNVRSRVA 203


>UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli
           subsp. xyli RepID=Q6ADI3_LEIXX
          Length = 207

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 77/200 (38%), Gaps = 7/200 (3%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+ +L          +      E ++  +       V+   +      
Sbjct: 4   IVLVDDHPILRHGMRTLLDTQEDFE-VVGDCGDPEEYRLLLKSARPDIVLMDLALGGD-- 60

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
            +G++         P T  LV    D +A  + SL      G L K ST       +  +
Sbjct: 61  TDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGA-SGYLLKDSTPVELFAAIRTA 119

Query: 131 LNGVRQATDRLNNQWYIN---QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
            +G    +  + ++          +L+P E E+L  ++ G +  Q+ E+L  +  T++ H
Sbjct: 120 RDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVKTH 179

Query: 188 KFNVMSKLGVSSDAGLLEAA 207
             ++ +KLGV + A  +  A
Sbjct: 180 VNHIFTKLGVDTRAAAVSRA 199


>UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QJ84_DESAH
          Length = 218

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 79/209 (37%), Gaps = 16/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + L++   +    ++    +              ++ +          VI   +     
Sbjct: 7   TILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHCP-NIVIMDINMP--- 62

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+    ++  K P  + + ++    +   + S+  +   G L K S+LE  H  + +
Sbjct: 63  DLNGIEAAKQIISKNPDIKIIALSML-CDEFNVKSMIQAGAKGFLLKTSSLEDLHTAILM 121

Query: 130 SLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
             +G         N              +   + L+  ER +++ ++ GY+  +I+E+L 
Sbjct: 122 VASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISEKLN 181

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + +T+  H+ N M+KL + + AGL   A
Sbjct: 182 ISKRTVDVHRTNTMNKLKIHTIAGLTRFA 210


>UniRef50_Q0BBT2 Two component transcriptional regulator, LuxR family n=1
           Tax=Burkholderia ambifaria AMMD RepID=Q0BBT2_BURCM
          Length = 226

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 22/223 (9%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS--RISFAAVIFSFS 64
            K  VAL++   + + G+    +  A     +  Y S      A S   +    +I  + 
Sbjct: 6   TKITVALLDDHPIVTFGLALRLQDEAD-ITIVGCYASASDLIAAFSVRTMHIDVLITDYQ 64

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
               +  +G++ +  L IK P  + +V +     + ++ +++   + G + K   LE   
Sbjct: 65  LRPGD-IDGINLIRLLKIKMPAVKIVVSSVFHTLSTVMLAMNA-GVRGFVGKEEPLEHLV 122

Query: 125 QELFLSLNGVRQATDRLNNQWYI-----------------NQSRTLSPTEREILRFMSRG 167
           + +     G  +    L+ +                        TL+  ERE+LR  + G
Sbjct: 123 KVVREVARGAHRVNSLLDAEAGAYHAASVATAKNGTSRACQAPVTLTLREREVLRCFATG 182

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            S++ IA + +R++KTI   K +   KLG+ +D  L    D L
Sbjct: 183 MSVSDIAAKFRRSLKTISTQKQSAYRKLGIRTDFELYAIVDKL 225


>UniRef50_C6XUH9 Response regulator receiver n=2 Tax=Pedobacter RepID=C6XUH9_PEDHD
          Length = 210

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 9/202 (4%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +IE       G   L    +     ++TY S ++ +  + R +   +I       +  
Sbjct: 9   VVIIEDDQTIREGYTYLINNTSPYQ-VVNTYPSFDAARQKIGRDNPDVIILDIQMPGT-- 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+  L  L    P    +++   + E  ++ +L+     G  +K +      + +   
Sbjct: 66  -NGIDALPLLKKTLPDVYIIMLTVHETEKIILEALANGA-SGYFTKNTPSSKIIEAIKDV 123

Query: 131 LNGVRQATDRLNNQ----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
           L G    +  +  +       N    L+  E +IL  MSRG   +QIA +L   I+T++ 
Sbjct: 124 LQGGGPMSPNVAKKVITSLQKNPDSPLTKRETQILSLMSRGKDRSQIANELFIEIETVKT 183

Query: 187 HKFNVMSKLGVSSDAGLLEAAD 208
           H  N+  KL V+S A  ++ A 
Sbjct: 184 HIKNIYLKLDVNSKADAIKVAK 205


>UniRef50_C1TL94 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TL94_9BACT
          Length = 215

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 14/205 (6%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERRE 72
           + +   +   G+  +  +           T QE+ +  +       V+   +     +  
Sbjct: 6   IADDHELFLEGVRDILSREDDLDVLALARTGQEALELTLQH-HPDVVVMDVTMP---KMN 61

Query: 73  GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLN 132
           G+     +       + L ++    +  +   L        L + S+ E+      +S  
Sbjct: 62  GIEASRRIKSSLGDVKILALSMHADKRLIAEILKAGASGYALKEGSSEELIRAIHIVSSG 121

Query: 133 GVRQATD----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
               +            +L +    +++  LS  ERE+L  +++G S  ++A  L  +  
Sbjct: 122 ETYLSPKIASILIKDYLKLLDTAVPSRASLLSDREREVLALLAKGSSTKEVASSLHISKN 181

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAA 207
           T+  H+  +M KL   + A L+  A
Sbjct: 182 TVDTHRRRIMEKLDCGNIAELIRFA 206


>UniRef50_B7V7K0 Probable transcriptional regulator n=6 Tax=Pseudomonas aeruginosa
           RepID=B7V7K0_PSEA8
          Length = 212

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 5/183 (2%)

Query: 23  GIESLFRKFAGNPYKLHTYTSQESFQDAMSRISF-AAVIFSFSAMRSERREGLSCLTELA 81
            ++    +  G    L      +S  + ++ +   + +I          R+G+  +  L 
Sbjct: 22  ALQRYLSEECGRQ-VLAVVGDSDSLVERLADLPPESILITELGLPGQRSRDGIHLVEWLT 80

Query: 82  IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRL 141
              P+ + +V +       L  ++  S     +SK S LE     L     G       L
Sbjct: 81  RHCPQMKVMVYSVFS-APLLAKAVLRSGASAYISKRSPLETLKAALECMALGQTFLDPGL 139

Query: 142 NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDA 201
           + Q +    + LSPTE +ILR ++RG ++++IA++  R++ TI  HK N M K+G++SDA
Sbjct: 140 HPQRHTG--KPLSPTEVDILRRLARGDTVSEIAQRTMRSVSTISTHKKNAMVKIGLNSDA 197

Query: 202 GLL 204
            L+
Sbjct: 198 ELI 200


>UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5
           Tax=Desulfovibrio RepID=A1VB77_DESVV
          Length = 216

 Score =  119 bits (299), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 16/209 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V ++E   +   GI++L                 E+ +  + + +   V+   +     
Sbjct: 4   TVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALR-IVEKHAPDIVLMDLTLP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             EG   + E+  +   T+ L +     ++ +  +LS    DG L K ++ +I  Q +  
Sbjct: 60  VMEGAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGA-DGYLLKNASRDILFQAMQT 118

Query: 130 SLNGVRQATDRLNNQWYINQSRT-----------LSPTEREILRFMSRGYSMTQIAEQLK 178
            L G R  +  +++    +  R            LS  E+++L+ ++ G+    +AE+L 
Sbjct: 119 VLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEKLC 178

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
            + KT+  HK N+  KLG +S A L+  A
Sbjct: 179 ISHKTVEKHKANLKRKLGTASTAELVTFA 207


>UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3
           Tax=cellular organisms RepID=C6XAP6_METSD
          Length = 214

 Score =  119 bits (299), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 79/204 (38%), Gaps = 12/204 (5%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V L++   +   G+  L  + +G        + ++++Q     +     +   S      
Sbjct: 8   VLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYLP-DVTVMDLSMPGMG- 65

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL  +  +  ++   R L+ +  +  A  + +L      G ++K  + +   + +   
Sbjct: 66  --GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGA-RGYVAKTGSFDELVKAVVEV 122

Query: 131 LNGVRQATDRLNNQWYINQS-------RTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
             G    +  +  +  +            LSP E E+ R  + G +  +IAE LK + KT
Sbjct: 123 ARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQKT 182

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAA 207
           +  +   V  KLG+S+   ++  A
Sbjct: 183 VANYHTLVKQKLGLSNPVEMVRFA 206


>UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI
          Length = 218

 Score =  119 bits (299), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 22/214 (10%)

Query: 13  LIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESF-----QDAMSRISFAAVIFSFSAMR 67
           L++   +   GI  L  +  G          +E             +    ++   S   
Sbjct: 2   LVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLPG 61

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G+     ++  +   R L+++  + E  ++ S+       +L  +S+ E+     
Sbjct: 62  M---SGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSSDEMIKAIR 118

Query: 128 FLS--------------LNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
            ++              L+G  Q   + +      +   LS  E+EIL+F+  G S  +I
Sbjct: 119 TIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSREI 178

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           AE+L+ +++T+  H+ N+M +L V + A L+  A
Sbjct: 179 AEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMA 212


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplas...   247   1e-64
UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR fa...   241   2e-62
UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=...   237   2e-61
UniRef50_C7MN84 Response regulator containing a CheY-like receiv...   237   2e-61
UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC...   235   6e-61
UniRef50_D1AEE5 Two component transcriptional regulator, LuxR fa...   235   8e-61
UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR fa...   235   1e-60
UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicut...   234   2e-60
UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR fa...   234   3e-60
UniRef50_Q01NC6 Two component transcriptional regulator, LuxR fa...   232   6e-60
UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR fa...   231   2e-59
UniRef50_C8WS10 Two component transcriptional regulator, LuxR fa...   230   2e-59
UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR fa...   230   3e-59
UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. ora...   229   6e-59
UniRef50_A0LVS2 Two component transcriptional regulator, LuxR fa...   229   7e-59
UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsoni...   229   8e-59
UniRef50_A1HU08 Two component transcriptional regulator, LuxR fa...   228   1e-58
UniRef50_A6GFX0 Two component transcriptional regulator, LuxR fa...   228   1e-58
UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 ...   227   2e-58
UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium ...   227   2e-58
UniRef50_B1Y743 Two component transcriptional regulator, LuxR fa...   227   3e-58
UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Acti...   227   3e-58
UniRef50_A8MF72 Two component transcriptional regulator, LuxR fa...   227   3e-58
UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=...   226   4e-58
UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Baci...   225   7e-58
UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR fa...   225   1e-57
UniRef50_B8FDP3 Two component transcriptional regulator, LuxR fa...   225   1e-57
UniRef50_D1XHI5 Two component transcriptional regulator, LuxR fa...   224   1e-57
UniRef50_B2J2N1 Two component transcriptional regulator, LuxR fa...   224   1e-57
UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_B8G137 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_C7RBI1 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_Q313W8 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR fa...   224   2e-57
UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=...   224   2e-57
UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus...   224   3e-57
UniRef50_B8D0J2 Two component transcriptional regulator, LuxR fa...   223   4e-57
UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Sele...   222   6e-57
UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator rece...   222   6e-57
UniRef50_B8GAC9 Two component transcriptional regulator, LuxR fa...   222   7e-57
UniRef50_Q11YW8 Two component transcriptional regulator, LuxR fa...   222   8e-57
UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromon...   222   8e-57
UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92...   222   8e-57
UniRef50_B9XL75 Two component transcriptional regulator, LuxR fa...   222   9e-57
UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR fa...   222   1e-56
UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltapr...   221   1e-56
UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=...   221   1e-56
UniRef50_A4CN07 Response regulator containing a CheY-like receiv...   221   2e-56
UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteri...   220   2e-56
UniRef50_B9XC41 Two component transcriptional regulator, LuxR fa...   220   2e-56
UniRef50_C1A9U5 NarL family two-component response regulator n=1...   220   2e-56
UniRef50_D1AAU8 Two component transcriptional regulator, LuxR fa...   220   2e-56
UniRef50_A5G586 Two component transcriptional regulator, LuxR fa...   220   2e-56
UniRef50_C7RMN3 Two component transcriptional regulator, LuxR fa...   220   3e-56
UniRef50_O07528 Uncharacterized transcriptional regulatory prote...   220   4e-56
UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR fa...   220   4e-56
UniRef50_B1M5J4 Two component transcriptional regulator, LuxR fa...   219   5e-56
UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC...   219   6e-56
UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi...   219   6e-56
UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas fl...   219   6e-56
UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 ...   219   7e-56
UniRef50_C6E3E1 Two component transcriptional regulator, LuxR fa...   218   9e-56
UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovib...   218   1e-55
UniRef50_D1C6S1 Two component transcriptional regulator, LuxR fa...   218   1e-55
UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR fa...   218   1e-55
UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium...   218   1e-55
UniRef50_Q1AST2 Two component transcriptional regulator, LuxR fa...   217   2e-55
UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillac...   217   2e-55
UniRef50_Q024Y7 Two component transcriptional regulator, LuxR fa...   217   2e-55
UniRef50_Q1H354 Two component transcriptional regulator, LuxR fa...   217   2e-55
UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacilla...   217   2e-55
UniRef50_A4VZN8 Response regulator containing a CheY-like receiv...   217   2e-55
UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=...   217   3e-55
UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=...   217   3e-55
UniRef50_B0C756 Two-component transcriptional regulator, LuxR fa...   217   3e-55
UniRef50_B4D2X8 Two component transcriptional regulator, LuxR fa...   217   3e-55
UniRef50_A7HA46 Two component transcriptional regulator, LuxR fa...   217   3e-55
UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 T...   217   3e-55
UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexac...   216   4e-55
UniRef50_A0L9F1 Two component transcriptional regulator, LuxR fa...   216   4e-55
UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR fa...   216   5e-55
UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR fa...   216   5e-55
UniRef50_Q47DK2 Two component transcriptional regulator, LuxR fa...   216   5e-55
UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 ...   216   5e-55
UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR fa...   216   5e-55
UniRef50_UPI0001C314AF two component transcriptional regulator, ...   216   5e-55
UniRef50_D0LYS4 Two component transcriptional regulator, LuxR fa...   216   5e-55
UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Ta...   215   6e-55
UniRef50_C7MUJ2 Response regulator containing a CheY-like receiv...   215   6e-55
UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax...   215   7e-55
UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR fa...   215   8e-55
UniRef50_C8WSR5 Two component transcriptional regulator, LuxR fa...   215   8e-55
UniRef50_Q13QW9 Two component transcriptional regulator, LuxR fa...   215   8e-55
UniRef50_Q04VJ6 Receiver component of a two-component response r...   215   1e-54
UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family prot...   215   1e-54
UniRef50_B6A2W0 Two component transcriptional regulator, LuxR fa...   215   1e-54
UniRef50_C6CZA5 Two component transcriptional regulator, LuxR fa...   214   1e-54
UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding...   214   1e-54
UniRef50_C6MDL5 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_A1SKW0 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms Re...   214   2e-54
UniRef50_Q2YB36 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_C4XNR8 NarL family two-component response regulator n=1...   214   2e-54
UniRef50_Q47FR0 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_B4CWX5 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_B2JSN3 Two component transcriptional regulator, LuxR fa...   214   2e-54
UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistip...   214   2e-54
UniRef50_C0N6H7 Response regulator receiver domain protein n=1 T...   214   3e-54
UniRef50_C1TQ52 Response regulator containing a CheY-like receiv...   213   3e-54
UniRef50_C4XMF2 NarL family two-component response regulator n=1...   213   3e-54
UniRef50_A7NP18 Two component transcriptional regulator, LuxR fa...   213   3e-54
UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR fa...   213   4e-54
UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga t...   213   4e-54
UniRef50_A6BYP5 Response regulator receiver domain protein n=1 T...   213   4e-54
UniRef50_A1K960 Probable transcriptional regulator, LuxR family ...   213   4e-54
UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactoba...   213   4e-54
UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR fa...   213   4e-54
UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 ...   213   4e-54
UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR fa...   212   6e-54
UniRef50_A9B5L0 Two component transcriptional regulator, LuxR fa...   212   6e-54
UniRef50_B2J8J5 Two component transcriptional regulator, LuxR fa...   212   6e-54
UniRef50_B1ZT64 Two component transcriptional regulator, LuxR fa...   212   7e-54
UniRef50_B7AAT6 Two component transcriptional regulator, LuxR fa...   212   9e-54
UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides...   212   9e-54
UniRef50_C6XAP6 Two component transcriptional regulator, LuxR fa...   212   1e-53
UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax...   211   1e-53
UniRef50_A4J6C2 Two component transcriptional regulator, LuxR fa...   211   1e-53
UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR fa...   211   2e-53
UniRef50_Q39C19 Two component transcriptional regulator, LuxR fa...   211   2e-53
UniRef50_C6D0G6 Two component transcriptional regulator, LuxR fa...   210   2e-53
UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 ...   210   2e-53
UniRef50_B2A6W2 Two component transcriptional regulator, LuxR fa...   210   2e-53
UniRef50_D1C1C8 Two component transcriptional regulator, LuxR fa...   210   3e-53
UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1...   210   3e-53
UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR fa...   210   3e-53
UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, ...   210   3e-53
UniRef50_A5V148 Two component transcriptional regulator, LuxR fa...   210   3e-53
UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betapro...   210   4e-53
UniRef50_UPI0001B502C9 two component LuxR family transcriptional...   210   4e-53
UniRef50_C1A5E6 NarL family two-component response regulator n=1...   210   4e-53
UniRef50_C5T9P3 Two component transcriptional regulator, LuxR fa...   210   4e-53
UniRef50_B1KE04 Two component transcriptional regulator, LuxR fa...   210   4e-53
UniRef50_B2KBW2 Two component transcriptional regulator, LuxR fa...   209   4e-53
UniRef50_Q0A525 Two component transcriptional regulator, LuxR fa...   209   5e-53
UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobact...   209   5e-53
UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opit...   209   6e-53
UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ecto...   209   6e-53
UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=...   209   6e-53
UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiob...   209   6e-53
UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 ...   209   7e-53
UniRef50_B4D808 Two component transcriptional regulator, LuxR fa...   209   7e-53
UniRef50_A9B4P1 Two component transcriptional regulator, LuxR fa...   209   8e-53
UniRef50_Q12FM5 Two component transcriptional regulator, LuxR fa...   209   8e-53
UniRef50_Q1LE49 Two component transcriptional regulator, LuxR fa...   209   8e-53
UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR fa...   209   9e-53
UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 ...   208   9e-53
UniRef50_A2SLK8 Two component transcriptional regulator, LuxR fa...   208   9e-53
UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepI...   208   1e-52
UniRef50_C1RMQ2 Response regulator containing a CheY-like receiv...   208   1e-52
UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrh...   208   1e-52
UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococc...   208   1e-52
UniRef50_C3JVF4 Two component transcriptional regulator, LuxR fa...   208   1e-52
UniRef50_A1WT06 Two component transcriptional regulator, LuxR fa...   208   2e-52
UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=...   207   2e-52
UniRef50_Q15T22 Two component transcriptional regulator, LuxR fa...   207   2e-52
UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR fa...   207   2e-52
UniRef50_C4DI56 Response regulator containing a CheY-like receiv...   207   2e-52
UniRef50_C6BTX3 Two component transcriptional regulator, LuxR fa...   207   2e-52
UniRef50_B3RA82 Response regulator protein; Response regulator r...   207   2e-52
UniRef50_A4XNE1 Two component transcriptional regulator, LuxR fa...   207   2e-52
UniRef50_B8ET67 Two component transcriptional regulator, LuxR fa...   207   3e-52
UniRef50_UPI00017452CB response regulator with a HTH DNA-binding...   207   3e-52
UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermop...   207   3e-52
UniRef50_A1RC88 Two-component system response regulator n=8 Tax=...   207   3e-52
UniRef50_C7I0E4 Two component transcriptional regulator, LuxR fa...   207   3e-52
UniRef50_C6WV69 Two component transcriptional regulator, LuxR fa...   206   5e-52
UniRef50_A1VT42 Two component transcriptional regulator, LuxR fa...   206   5e-52
UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiob...   206   5e-52
UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphy...   206   5e-52
UniRef50_A0NNP3 Response regulator containing a CheY-like receiv...   206   6e-52
UniRef50_C6W5G0 Two component transcriptional regulator, LuxR fa...   205   6e-52
UniRef50_C5V5K1 Two component transcriptional regulator, LuxR fa...   205   7e-52
UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microsc...   205   7e-52
UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR fa...   205   8e-52
UniRef50_C6DD36 Two component transcriptional regulator, LuxR fa...   205   8e-52
UniRef50_B9XAM6 Two component transcriptional regulator, LuxR fa...   205   8e-52
UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax...   205   8e-52
UniRef50_C6VXD5 Two component transcriptional regulator, LuxR fa...   205   8e-52
UniRef50_B6JD38 Two component transcriptional regulator, LuxR fa...   205   8e-52
UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR fa...   205   9e-52
UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=M...   205   9e-52
UniRef50_Q021D5 Two component transcriptional regulator, LuxR fa...   205   9e-52
UniRef50_C6C0G1 Two component transcriptional regulator, LuxR fa...   205   1e-51
UniRef50_C1TL62 Response regulator containing a CheY-like receiv...   205   1e-51
UniRef50_A5FIE9 Two component transcriptional regulator, LuxR fa...   205   1e-51
UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family prot...   205   1e-51
UniRef50_B5EEC0 Two component transcriptional regulator, LuxR fa...   205   1e-51
UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR fa...   205   1e-51
UniRef50_C6C961 Two component transcriptional regulator, LuxR fa...   204   1e-51
UniRef50_C7MRK0 Response regulator containing a CheY-like receiv...   204   2e-51
UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator rece...   204   2e-51
UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR fa...   204   2e-51
UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opit...   204   2e-51
UniRef50_A1ATT6 Two component transcriptional regulator, LuxR fa...   204   2e-51
UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmic...   204   2e-51
UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methyli...   204   2e-51
UniRef50_C7MLQ9 Response regulator containing a CheY-like receiv...   204   2e-51
UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167 Ta...   204   2e-51
UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paeniba...   204   3e-51
UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus...   203   3e-51
UniRef50_D1CF52 Two component transcriptional regulator, LuxR fa...   203   3e-51
UniRef50_Q39TN7 Two component transcriptional regulator, LuxR fa...   203   3e-51
UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR fa...   203   4e-51
UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomyceta...   203   4e-51
UniRef50_C5V4R9 Two component transcriptional regulator, LuxR fa...   203   4e-51
UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n...   203   4e-51
UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 T...   203   5e-51
UniRef50_C1SMK1 Response regulator containing a CheY-like receiv...   202   5e-51
UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR fa...   202   5e-51
UniRef50_A1VB77 Two component transcriptional regulator, LuxR fa...   202   6e-51
UniRef50_C4DCK3 Response regulator containing a CheY-like receiv...   202   6e-51
UniRef50_B4CVL8 Two component transcriptional regulator, LuxR fa...   202   7e-51
UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR fa...   202   7e-51
UniRef50_B4DA09 Two component transcriptional regulator, LuxR fa...   202   7e-51
UniRef50_D1BX47 Two component transcriptional regulator, LuxR fa...   202   7e-51
UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID...   202   8e-51
UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR fa...   202   8e-51
UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Act...   202   1e-50
UniRef50_C7LQH4 Two component transcriptional regulator, LuxR fa...   202   1e-50
UniRef50_A8L3K7 Two component transcriptional regulator, LuxR fa...   202   1e-50
UniRef50_D2QF32 Two component transcriptional regulator, LuxR fa...   201   1e-50

Sequences not found previously or not previously below threshold:

UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Ac...   211   1e-53
UniRef50_B2A8K6 Two component transcriptional regulator, LuxR fa...   210   3e-53
UniRef50_D1VBH1 Two component transcriptional regulator, LuxR fa...   209   4e-53
UniRef50_P55184 Uncharacterized transcriptional regulatory prote...   209   6e-53
UniRef50_B0C955 Two-component transcriptional regulator, LuxR fa...   209   6e-53
UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 ...   209   7e-53
UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteri...   206   4e-52
UniRef50_A3Y699 Putative two component system response regulator...   205   6e-52
UniRef50_UPI00018507A5 two component LuxR family transcriptional...   205   7e-52
UniRef50_B5JFN7 Response regulator receiver domain protein n=1 T...   204   2e-51
UniRef50_B4DAD9 Two component transcriptional regulator, LuxR fa...   204   3e-51
UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobact...   202   6e-51
UniRef50_C5VAN3 Two component transcriptional regulator, LuxR fa...   202   8e-51
UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenel...   202   8e-51
UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V...   202   9e-51
UniRef50_D1B9T1 Two component transcriptional regulator, LuxR fa...   202   1e-50

>UniRef50_C0QFU8 TRAP-type C4-dicarboxylate transporter, periplasmic solute-binding
           protein n=1 Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFU8_DESAH
          Length = 219

 Score =  247 bits (633), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 83/223 (37%), Gaps = 18/223 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  V + E   +   G+ SL                +E+    +  ++   V+   S 
Sbjct: 1   MNKIKVLVAEDHTIVRKGLCSLLYSEPDIEVVGEAENGREA-IKMVEELAPDVVLMDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+    +L  K+P  + L+++    E  +  +L      G L K S      +
Sbjct: 60  PE---LNGMDATRQLKKKYPDVKILILSMHSTEEYIFETLRAGA-SGYLIKRSAPTDLIK 115

Query: 126 ELFLSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQ 172
            +  +  G    +  ++ +                     LS  ERE+L+ ++ G++  +
Sbjct: 116 AIHAAHAGDCFLSPSISKKVIKNYVQQKQGLSLEPRGLDLLSAREREVLQLIAEGHANRE 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           IA  L  + KT+ AH+ ++  KLG++  A L + A     +  
Sbjct: 176 IAGHLYISPKTVEAHRNHIQKKLGLNGTAELTKYAIRKGLVEL 218


>UniRef50_Q01NJ8 Two component transcriptional regulator, LuxR family n=2
           Tax=Acidobacteria RepID=Q01NJ8_SOLUE
          Length = 224

 Score =  241 bits (615), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 18/227 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  + L +   +   G+ +L    A          +         ++    V+     
Sbjct: 1   MSKTKILLTDDHTLFRQGVRTLLAAEADMEVAGEAA-NAMDAVALAQQLRPDVVLMDIGM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                         +  + P  + + ++  D E  L   +     +G + K S  +    
Sbjct: 60  AGMSS---FEATRLIRKERPEVKVIFLSMYDDEDYLAECV-DMGANGYILKDSPADQLIT 115

Query: 126 ELFLSLNGVRQATDRLNNQWYIN-------------QSRTLSPTEREILRFMSRGYSMTQ 172
            +     G    + RL ++   +             +  TL+  EREIL+ ++ G S+ +
Sbjct: 116 AIREVQRGGSYLSPRLLSRLVDDFRLQGRGGGTRSPRFGTLTKREREILKMLAEGKSVKE 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
           IA   + ++KT+ AHKFN+M KL + + A L++ A     +R  ET+
Sbjct: 176 IAAFFELSVKTVEAHKFNLMRKLDIHNKAQLVQYAIQKKIIRLPETT 222


>UniRef50_B9L0H3 Transcriptional regulatory protein degU n=1 Tax=Thermomicrobium
           roseum DSM 5159 RepID=B9L0H3_THERP
          Length = 245

 Score =  237 bits (607), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 24/236 (10%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +   N+ +++   +   GI     +              E+ + A   +S   ++   S 
Sbjct: 1   MSPINILIVDDHPLFRSGIRWSLEQNPQFVIVGEAADGSEALRLA-DELSPDVILVDLSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL     L  + P+   +++     + +L  ++         +K    E    
Sbjct: 60  PGM---NGLEVARALKRRQPQAGVIILTMHQDDEQLFNAIRAGA-SAYCTKDIEPEQLID 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQ-------------------SRTLSPTEREILRFMSR 166
            +     G     + + ++ ++                        L+P E EIL  ++R
Sbjct: 116 VITRVARGEYLINEMVLSRPFVASRVLDQFRELSRLDRTSSGFFSPLTPREIEILDCVAR 175

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVL 222
           GYS  +IA+ L  + +T++ H  +++ KL V+     +  A     ++  +T + L
Sbjct: 176 GYSNKEIAQALNISDQTVKNHITSILRKLAVNDRTQAVIYALRHGWIKLEDTEDSL 231


>UniRef50_C7MN84 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=2
           Tax=Coriobacteriaceae RepID=C7MN84_CRYCD
          Length = 215

 Score =  237 bits (606), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 81/210 (38%), Gaps = 15/210 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            +VA+ +   +   G   +                +E++ D ++R+    ++   S    
Sbjct: 2   IDVAIADDHAVVRQGFAFIINSQCDMRVVGEAADGKEAY-DLVARVEPHVLLLDISMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL     ++  FP TR +++   +    L  +L      G + K S+ E+    + 
Sbjct: 59  PGENGLIACERISCDFPSTRIIILTMFEETDYLFYTLR-GGAAGYVLKNSSTEVLLGAIR 117

Query: 129 LSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
               G       +                 N    LS  E EI   +++GY+  + A++L
Sbjct: 118 KVATGETYIEPNMAQALSGKLHGQSGVAEKNPYHELSSREFEIFSLLAQGYTNKEAADKL 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++KT+  H+  + +KLGV+S A L+  A
Sbjct: 178 FISVKTVETHRSKIYAKLGVNSRAELVHLA 207


>UniRef50_B7GL14 DNA-binding response regulator, NarL family (REC-HTH domains) n=30
           Tax=Bacillales RepID=B7GL14_ANOFW
          Length = 260

 Score =  235 bits (602), Expect = 6e-61,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + LI+   +   GI+ +                 E+    + R     VI   +   
Sbjct: 36  KTRIVLIDDHKLFREGIKRILDFEQDFEVVAEGSDGDEAL-ALVERYKPDVVIMDINMP- 93

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G+    +L   +P T+ ++++  D E+ ++ +L    + G L K    +   + +
Sbjct: 94  --HVNGVEATRQLIEAYPDTKVIILSIHDDESYVMHALQTGAM-GYLLKEMDADALIEAV 150

Query: 128 FLSLNGVRQATDRL---------------------NNQWYINQSRTLSPTEREILRFMSR 166
            +   G      ++                      NQ        L+  E E+L+ ++ 
Sbjct: 151 RVVAEGGSYLHPKVTHNLVKEYRRLVAGEGGGKEKQNQDVCRPYHLLTRRECEVLQLLAD 210

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           G S   IA+ L  + KT++ H  N++ KL V+     +  A     + 
Sbjct: 211 GKSNKGIADALYISEKTVKNHVSNILQKLNVNDRTQAVVVAIKNGWVE 258


>UniRef50_D1AEE5 Two component transcriptional regulator, LuxR family n=37
           Tax=Bacteria RepID=D1AEE5_THECD
          Length = 244

 Score =  235 bits (601), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 77/224 (34%), Gaps = 18/224 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAAVIF 61
             K  + L +   +   G+  +                 E+ +    R          + 
Sbjct: 25  PAKTRILLADDHALVRRGVRLILDGEPDLWVVGEAGDGAEAIEQVRRRAGTPQEVDLAVL 84

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
             +  R     GL    EL+  +PR R L++   D E  L  +L      G + K+    
Sbjct: 85  DVAMPRM---TGLQAARELSRMYPRLRILILTMHDNEQYLFEALKAGAA-GYVLKSLADR 140

Query: 122 IFHQELFLSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171
              Q    ++ G                    +        L+P E EIL+ ++ G+S  
Sbjct: 141 DLVQACRAAVRGEPFLYPGAISVLIRSYLEQARQGEEPETPLTPREEEILKLVAEGHSSR 200

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +IA+ L  ++KT+  H+ N+++KLG+     L   A     +  
Sbjct: 201 EIADTLFISVKTVERHRANILAKLGMKDRLELTRYAIRTGLIEP 244


>UniRef50_Q2RJU9 Two component transcriptional regulator, LuxR family n=3
           Tax=Clostridia RepID=Q2RJU9_MOOTA
          Length = 222

 Score =  235 bits (600), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 78/221 (35%), Gaps = 16/221 (7%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            + I+K  + + +   +   GI  +              T QE+  +   R     +I  
Sbjct: 1   MTDIEKITILIADDHSLVREGIRKILELEPDLQVVGEAATGQEA-IEMTRRYQPQVIIMD 59

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            +        G+     +  ++P+   L +   D E  +I  L    + G + K  + E 
Sbjct: 60  INMPG---LNGIEATKVIRQEWPQIAILALTIHDDEEYIIELLRSG-VSGYVLKDISAEE 115

Query: 123 FHQELFLSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMT 171
             Q ++    G R     +  +                S  L+  EREIL  +S G S  
Sbjct: 116 LVQAVYQVARGARVIHPGVAQKVIGCIQKQKPFTPAPVSIPLTAREREILIHVSLGKSNR 175

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           +IA +L  + KT++ H  ++  K+GVS        A     
Sbjct: 176 EIARELFISEKTVKNHLTHIFHKIGVSDRTQAALYALKHGL 216


>UniRef50_Q5HLK6 Oxygen regulatory protein nreC n=71 Tax=Firmicutes RepID=NREC_STAEQ
          Length = 218

 Score =  234 bits (599), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 79/222 (35%), Gaps = 19/222 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G   +                 E++Q  +       +I   S    
Sbjct: 1   MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEH-RPDVLILDLSMP-- 57

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL   ++++  FP T+ L++   D E  L   L      G + K S  E     + 
Sbjct: 58  PGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGA-KGYILKNSPDEQLILAVR 116

Query: 129 LSLNGVRQATDRLNNQW---------------YINQSRTLSPTEREILRFMSRGYSMTQI 173
               G      +L                     +  + LS  E EIL  +++GY    I
Sbjct: 117 TVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDI 176

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           AE+L  ++KT+ AHK ++M+KL + S   L+E A     +  
Sbjct: 177 AEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF 218


>UniRef50_Q1LEP5 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderiaceae RepID=Q1LEP5_RALME
          Length = 214

 Score =  234 bits (597), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 12/211 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+  +  + +            E     +  +S   ++   S    
Sbjct: 2   IRVIIADDHTVVRNGLRHILERTSDFEVVGEAARGTE-VPQLVRELSPHVILLDLSMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
             R GL  + +L    P  R LV+     E  ++ +       G L+K S      + L 
Sbjct: 60  --RNGLELIRQLRTDHPALRILVLTMHAEEQYVVRAFRAGAA-GYLTKESAATELVEALR 116

Query: 129 LSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G    +  +  +               LS  E E+ R +  G S+TQIA  L  + 
Sbjct: 117 KVAAGGTYVSPAMAEKLALGLQEKPDAPHEGLSDRELEVFRRIVDGESLTQIAAALCVSA 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           KT+  +K  +M KL + SDA L+  A     
Sbjct: 177 KTVSTYKMRLMEKLQLRSDAALVRYAIEARL 207


>UniRef50_Q01NC6 Two component transcriptional regulator, LuxR family n=3
           Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q01NC6_SOLUE
          Length = 216

 Score =  232 bits (593), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 80/221 (36%), Gaps = 17/221 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K   + L +   +   G+  L     G          +++   A        V+   + 
Sbjct: 1   MKTIRILLADDHTVVRKGLRLLLESHPGFQVIGDAADGRDAVSLAGEHT-PDVVVMDVAM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+    +++ K P T  + ++    E+ ++ +L       +L  ++  +    
Sbjct: 60  PG---LNGIEAARQISAKLPHTAIVFLSMHSDESYVLKALKAGARAYLLKDSAEHD-LIA 115

Query: 126 ELFLSLNGVRQATD------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
            +     G    +             ++  +   +    L+  ERE+L+ ++ G +  ++
Sbjct: 116 AVIAVSEGKAFFSPAISKMLVEDYMRQMQERQIEDSYELLTTREREVLQLLAEGKNNKEV 175

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           A  L  ++ T+  H+ N++ KL + S A L+  A     + 
Sbjct: 176 AAILNLSLYTVETHRGNILQKLNLHSGAELILYAIRKGVIS 216


>UniRef50_Q1J0X7 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteria RepID=Q1J0X7_DEIGD
          Length = 228

 Score =  231 bits (590), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 74/220 (33%), Gaps = 14/220 (6%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
             +   + L++   +   G   L    A         + +E+   A  ++    ++   S
Sbjct: 11  HTRPITLLLVDDHPVVRKGTRELLEGEADLRVVGEAESGEEAILKA-RQLMPDVILMDVS 69

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   G+     +  + P    LV+   D +A +   L      G L K ++ +   
Sbjct: 70  MPGM---NGIEATRAIKAERPGVGILVLTSYDDDAYVFALLEAGAA-GYLLKNASEDELL 125

Query: 125 QELFLSLNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
             +     G       +          +Q        LSP E E+LR  + G +  +IA 
Sbjct: 126 GAVRAVAAGESALHPAVARKVLERFSTHQTPTPPEDALSPRELEVLRVAATGRTNKEIAR 185

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            L  + +T++ H  N+ SKLGV S    +        +  
Sbjct: 186 DLDISPRTVQVHLANIFSKLGVGSRTEAVLYGIKRGWIDP 225


>UniRef50_C8WS10 Two component transcriptional regulator, LuxR family n=2
           Tax=Alicyclobacillus acidocaldarius RepID=C8WS10_ALIAD
          Length = 224

 Score =  230 bits (589), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 84/217 (38%), Gaps = 10/217 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    V +++   +   G+  +    AG          +++ + A+ +     ++     
Sbjct: 1   MAHTRVVIVDDHALVRQGLRLILHGVAGIEVVGECSCGEDALKAAV-KDRPDVMLMDVHM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
              +  +G++    L    P+ R +++   D    +   L    + G++ K         
Sbjct: 60  P--QGLDGITTARHLRQIAPQVRVIMLTMFDDRVHVEKMLDAG-VSGIVFKHDDSSEIVA 116

Query: 126 ELFLSLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
            +     G    + R   +           +  LSP E E+L  +++GY+  ++A+ L  
Sbjct: 117 AIQHGQPGHPYLSRRWGQRANAETVSPSRTAERLSPRETEVLVLLAQGYTNREVADALHI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           ++KT+  H+ ++M ++G+ S A L+  A     +   
Sbjct: 177 SVKTVETHRQHIMRRIGLHSRAALVRYAYQNGLVDPP 213


>UniRef50_Q2RMH6 Two component transcriptional regulator, LuxR family n=8
           Tax=Bacteria RepID=Q2RMH6_MOOTA
          Length = 221

 Score =  230 bits (588), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 17/222 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G+ +L  +         T +                V+        
Sbjct: 3   IRVMLVDDHALVREGLRALLEREGDIEVVGETGS-AAGVLALAEESRPEVVVMDLQL--G 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
             R G+    EL  K P  + ++++  D E  +  +L      G + K + +E     + 
Sbjct: 60  AGRNGVEATRELVEKKPEIKVVILSMYDDEELVFRALESGA-RGYVLKRAGIEELTTAIR 118

Query: 129 LSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
           L   G      ++  +                 +   L+  E E+LR  + G +  +IA 
Sbjct: 119 LVARGEAYLDPQIARRVIEGLQERLPFTRASRPEGPELTERELEVLRLAAEGLTNAEIAR 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           +L  ++KT++AH+ N+M KLG+     L++ A     ++   
Sbjct: 179 RLVISVKTVQAHRANIMQKLGLHDRVDLVKYAIKNGILKLDS 220


>UniRef50_C6J7D2 Response regulator n=1 Tax=Paenibacillus sp. oral taxon 786 str.
           D14 RepID=C6J7D2_9BACL
          Length = 227

 Score =  229 bits (585), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 15/224 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA---MSRISFAAV 59
             R+ K  V +++   M  +G+++   +  G          +E+ +     +       +
Sbjct: 7   EPRMSKIKVMIVDDHDMVRMGLKTYLMQDPGFEVIAEAGDGREAVELLERGLREGQPDII 66

Query: 60  IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
           +            G     E+  +FP  + +++     +  ++ ++    +  VL K  +
Sbjct: 67  LMDLMMPGM---NGAEATKEVRSRFPDMKIVILTSFLEDDLVVQAVEAGAVSYVL-KTVS 122

Query: 120 LEIFHQELFLSLNG--------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMT 171
            E     L  +  G         +  T  L  +        ++  E+E+L  ++ G S  
Sbjct: 123 AEELIYALQGAYRGMPVMTGEVAQALTRGLRQRTVQGDDSGMTEREKEVLLLIAEGKSNK 182

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            IAE+L  +IKT++ H  N++ K  +     L   A     + H
Sbjct: 183 DIAEELHISIKTVKTHVSNLLMKCELEDRTQLAIYAHRQGWVGH 226


>UniRef50_A0LVS2 Two component transcriptional regulator, LuxR family n=35
           Tax=Actinomycetales RepID=A0LVS2_ACIC1
          Length = 303

 Score =  229 bits (584), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 19/221 (8%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
              V + +   +   G+E + R+              E+   A   +    V+       
Sbjct: 86  PIKVLVADDHALFRRGLEMVLRQEPDIQLVAEASDGAEAVARAAETL-PDVVLLDVRMP- 143

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
             +R G+     +    P  + +++   D EA L  ++    + G L K  +++     +
Sbjct: 144 --KRTGIEACAAIKEVCPSAKIIMLTISDEEADLYEAIKAGAM-GYLLKEISIDEVAAAI 200

Query: 128 FLSLNGVRQATDRLNNQWYIN--------------QSRTLSPTEREILRFMSRGYSMTQI 173
                G    +  + ++                   +  L+  E E+LR +++G +   I
Sbjct: 201 RAVHGGQSLISPSMASKLLNEFASLIKRGDARHQVPAPKLTEREMEVLRLVAKGLNNRDI 260

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           A+QL  +  T++ H  N++ KL + S    +  A     + 
Sbjct: 261 AKQLFISENTVKNHVRNILEKLQLHSRMEAVVYAVREKLLE 301


>UniRef50_Q11VH7 Response regulator n=1 Tax=Cytophaga hutchinsonii ATCC 33406
           RepID=Q11VH7_CYTH3
          Length = 220

 Score =  229 bits (584), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 89/221 (40%), Gaps = 22/221 (9%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK N+ L++   +   GI++  +               +   +A+ ++    VI   + 
Sbjct: 1   MKKINILLVDDHTIVRDGIKATLKDQKNFHIVGEAANGLDG-IEAVKQLKPDVVIMDITM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+     ++ K+P ++ L+++  D E  ++ S+      G L K    + F +
Sbjct: 60  PEM---SGIEAADVISKKYPDSKVLILSMHDNETYILKSVEAGAY-GYLLKDVDKDEFIK 115

Query: 126 ELFLSLNGVRQATDRLN-----------------NQWYINQSRTLSPTEREILRFMSRGY 168
            +    NG +     ++                    Y N    L+  E+ IL+ ++ G 
Sbjct: 116 AITAVYNGDKYFNTAISSVLVSGYLSKVKQTDSIQSGYSNDEYELTKREKGILKMITDGK 175

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +  +IA+ L  +I+TI  H+ N+M KL V +   L+  A  
Sbjct: 176 NNREIADGLGISIRTIETHRANIMKKLKVKNAVELVRIAID 216


>UniRef50_A1HU08 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU08_9FIRM
          Length = 216

 Score =  228 bits (583), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 81/218 (37%), Gaps = 14/218 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  V +++   +   G+  +                         ++    V+   S 
Sbjct: 1   MKKIKVLIVDDHTLMRSGLRLMLSAQEDIEVVGEAADGSGG-IAMAQKMRPDVVLLDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL CL  L    P  R +++   +    +    +   +  VL KA+  ++ +Q
Sbjct: 60  PEM---SGLECLKTLLANQPDLRVILLTMHEDARYVKEGFALGAMGYVLKKAAD-DVLYQ 115

Query: 126 ELFLSLNGVRQATDRLNNQ---------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +    +G       +               +  + LS  E+++L  ++ GY+  +IAEQ
Sbjct: 116 AVRAVYSGEMYIQPSITKAVVAELTERPRADDLRKPLSDQEKKVLSLIAAGYANREIAEQ 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           L  ++KT+  +K+ +M KL     + L++ A     + 
Sbjct: 176 LVISVKTVETYKYRIMEKLNCKKRSDLVKFALDNGLLA 213


>UniRef50_A6GFX0 Two component transcriptional regulator, LuxR family protein n=1
           Tax=Plesiocystis pacifica SIR-1 RepID=A6GFX0_9DELT
          Length = 220

 Score =  228 bits (583), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 89/222 (40%), Gaps = 18/222 (8%)

Query: 6   IKKR-NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           + +   V L+E   +   G+++L                + +  +A  R++   V+   +
Sbjct: 1   MTQTVRVLLVEDHTIVREGLKALLTATEDLEVVGEVADGR-AAVEAAERLAPDVVVMDIN 59

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                + +G+    E+  K    R L+++  D E  +  ++      G L K S L    
Sbjct: 60  MP---KLDGVGATREIREKVNAPRVLILSMYDGEEYVRPAIRAGA-SGYLLKGSGLSDLV 115

Query: 125 QELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMTQ 172
             +     G    +  +              +   + + +L+  ERE+L  +  G S  +
Sbjct: 116 TAIREVAGGNAFFSPTVAKILLQESRGERSVKEAPDPADSLTKREREVLTLVGEGKSSPE 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           IA+ L  ++KTI  H+  +M+KLGV + AGL+  A  +  + 
Sbjct: 176 IAKILGLSVKTIEGHRGRIMAKLGVHNVAGLVRQAIRIGLVS 217


>UniRef50_Q3Z7M1 DNA-binding response regulator, LuxR family n=7 Tax=Bacteria
           RepID=Q3Z7M1_DEHE1
          Length = 232

 Score =  227 bits (581), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 89/219 (40%), Gaps = 17/219 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            ++ L +   +   G+++L    A            E+  + +  +    ++        
Sbjct: 2   ISIVLADDHQIVRHGLKALLEAEADFEVVGEASDGIEA-VNLVESLQPGVLVTDLMMGGM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+    ++  + P+T  ++++    EA +  +L       VL K ST E   + + 
Sbjct: 61  ---SGIEVTYQVVKRSPKTAVVILSMYGNEAYVHEALRAGARAYVL-KDSTSEELVRSVR 116

Query: 129 LSLNGVRQATDRLNNQWYI------------NQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            ++ G R  +  L+ +               +   TL+  ERE+L  +++G++  +IAE+
Sbjct: 117 EAVQGHRYLSSPLSEKAIEAYMEKSAEATSLDPYETLTIREREVLHLVAQGHTCAEIAER 176

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           L  + +T+  H+ N+M KL + +   LL  A     +  
Sbjct: 177 LFISPRTVEVHRANMMRKLDLRNQTQLLRYALQRGIIPP 215


>UniRef50_B9L1R6 Response regulator uvrY n=1 Tax=Thermomicrobium roseum DSM 5159
           RepID=B9L1R6_THERP
          Length = 221

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 78/226 (34%), Gaps = 18/226 (7%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
              K  V L +   +  +G+ +L              T  +   +    +     +   S
Sbjct: 2   TTNKIRVLLADDHPIVRVGLRALLEAEPDIAVVGEAGT-ADEAVELARTLQPDVAVLDIS 60

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   GL  L  +A     TR L++     E  L+  L      G + K+S      
Sbjct: 61  MPG----NGLEALRRIASLGLPTRTLILTVHAEERYLLPVLQAGG-SGYVRKSSLHTDLV 115

Query: 125 QELFLSLNGVRQATDRLNNQWYI------------NQSRTLSPTEREILRFMSRGYSMTQ 172
           + + L   G                          + ++ LS  ERE+LR  + GY+  +
Sbjct: 116 EAIRLVARGEVFIDQAAARTLLQGYLDHARTGEVQDPAQLLSEREREVLRLTAAGYTAQE 175

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218
           IA+QL  + KT+  ++  VM KLG S  + L+  A  +  +     
Sbjct: 176 IADQLFLSPKTVETYRHRVMQKLGFSRRSELVRFALRIGLLDPQAE 221


>UniRef50_B1Y743 Two component transcriptional regulator, LuxR family n=6
           Tax=Bacteria RepID=B1Y743_LEPCP
          Length = 211

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 13/208 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G++ L    A         +  E   D   R ++   +  +     
Sbjct: 3   MRVFIADDHPVVRQGLKQLLGAEADFSVAGEASSGHE-VIDQCGRFAWDVAVLDYRMPGK 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  + EL  +FP    LV++    +   +  L      G L+K S  E     + 
Sbjct: 62  G---GIDLIKELRQRFPDRPVLVLSVCPEDQYAMRVLRAGAA-GYLTKESAPEDLVNAIR 117

Query: 129 LSLNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G R  +  L  Q  ++ S          LS  E +I+  ++ G  + +IA+QL  +
Sbjct: 118 KVARGGRFVSAALGEQLALSLSTGGDEPLHCRLSDREYQIMWLLASGKKVGEIAQQLFLS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAAD 208
             TI  ++  ++ KL + S+A L+  A 
Sbjct: 178 PNTISTYRKRILEKLDLKSNAELMRYAI 205


>UniRef50_D2BDI1 Response regulator receiver protein n=8 Tax=Actinomycetales
           RepID=D2BDI1_STRRD
          Length = 227

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
             S  +   V L++   +   G+ +L  +  G           E     +  ++   V+ 
Sbjct: 12  SESIGEPIRVLLVDDHPLLRHGLRALLEQVGGAEVVGEAGDG-EEAIALVLSLNPDVVVM 70

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
                      G+     L  + P    LV+   + +A +  +L      G + K +   
Sbjct: 71  DLVMPG---VTGIEATRTLIDRRPDLGVLVLTMSEDDASVFAALRAGA-RGYVLKGADGN 126

Query: 122 IFHQELFLSLNGVRQATDRLNNQ--------WYINQSRTLSPTEREILRFMSRGYSMTQI 173
            F   +     G       +  +                L+  EREIL  ++ G S  +I
Sbjct: 127 DFIAAVRAVARGEAVYGPAVARRIRRFLTTGPESGPFPELTQREREILDLLASGKSNAEI 186

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           A +L  + KT++ H  ++ +KL V+     +  A     
Sbjct: 187 ARRLFLSQKTVKNHLTSIFAKLQVADRTQAVVRARRAGL 225


>UniRef50_A8MF72 Two component transcriptional regulator, LuxR family n=14
           Tax=Clostridia RepID=A8MF72_ALKOO
          Length = 224

 Score =  227 bits (579), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 76/218 (34%), Gaps = 17/218 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
             +KK NV + +   +   G++ +                +E+      ++S   V+   
Sbjct: 6   KSVKKINVLIADDHALVRQGLKQIIELEPDIKVIGLAADGEEAVLKT-QQLSPDVVLLDI 64

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           S     ++ G+  L  L       + +++   +    L  +++    +G + K +  E  
Sbjct: 65  SMP---KQNGIQTLRRLKDMDSTIKIIMLTFHEDREYLFETINLGA-NGYVLKDAESESL 120

Query: 124 HQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMT 171
            + +     G+      L  +               N    L+  E E+L  ++ G +  
Sbjct: 121 IKAIRDVYQGLNYIYPTLATELVKEFNRREVKSQKRNNEDELTRREYEVLTLLAEGINNK 180

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +I + L  + KT++ H  N+  K+ V+        A  
Sbjct: 181 EIGDCLFISEKTVKNHVSNIFKKINVNDRTQAAIYAYK 218


>UniRef50_B9L2G4 Transcriptional regulatory protein degU n=2 Tax=Thermomicrobia
           (class) RepID=B9L2G4_THERP
          Length = 246

 Score =  226 bits (578), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 76/220 (34%), Gaps = 15/220 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           ++  V +++   +   G+  L                Q++    ++ +    V+   +  
Sbjct: 26  RRIRVLIVDDHDLFREGLRQLIETDPAIEVVGEAANGQDAL-KMVAELQPDVVLMDINMP 84

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                +G+     +  ++     L++   D E  ++ ++       ++ K S  E   + 
Sbjct: 85  GM---DGIRATEAIVQQYRHVHVLMLTMYDDEEYVLHAIRAGARSYLV-KNSKPEELLRA 140

Query: 127 LFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
           + ++  G       L                 + + LS  E  +LR +++GY+  QIA+ 
Sbjct: 141 IHVAAEGGATIDPDLAPILMREYQRLLTKAPTRGQDLSDRELTMLRLLAQGYNNRQIADA 200

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           L     T++ +   +  KLGV      +  A     +   
Sbjct: 201 LNLAESTVKNNLSALFQKLGVRDRTQAVIYAISHGLVPRP 240


>UniRef50_A8VTE0 Response regulator receiver protein n=1 Tax=Bacillus
           selenitireducens MLS10 RepID=A8VTE0_9BACI
          Length = 219

 Score =  225 bits (576), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 87/221 (39%), Gaps = 18/221 (8%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L++   +   G++ +    A            ES  +  +  +   +I   S   
Sbjct: 2   KTRIMLVDDHPVFRSGLKHILCTEADYHVIAEA-DDGESAIEMAAEANPDIIIMDISMPG 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
               +G+    E+  K P  R L++     EA L  SL      G + K +        +
Sbjct: 61  ---LDGIEVTREIKRKIPDIRILMLTMYADEAFLKESLDAGA-SGYVLKRAVDTELVHAV 116

Query: 128 FLSLNGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIA 174
            L +NG       L  + Y              NQ+  LS  E+E+L++++ GY+  +I+
Sbjct: 117 KLVMNGEHYIYPTLIPKLYHANQPQQDAVSPDSNQAVELSQREQEVLKYIALGYTQKEIS 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            +L  +IKT+  +K  VM K+G    + L+  A     + H
Sbjct: 177 TELFISIKTVDTYKKRVMEKIGSKKKSALVRYALKHNIINH 217


>UniRef50_Q1GIA7 Two component transcriptional regulator, LuxR family n=29
           Tax=Alphaproteobacteria RepID=Q1GIA7_SILST
          Length = 233

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 82/209 (39%), Gaps = 8/209 (3%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
              V +++   M + GI+S+   +          + +E+   A   +    ++   +   
Sbjct: 23  PIRVLIVDDHPMVAEGIQSILESYGDIEVVGAVSSGREAIARA-EALVPDVILMDLNMP- 80

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                GLS    +  + P  R L+++  D    +  +LS   + G + K    E     +
Sbjct: 81  --DVGGLSATEIIQERCPEIRVLILSMHDSPEYITTALSHGAV-GYVLKDVQPEEIKTAI 137

Query: 128 FLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
              + G +                    L+  E+ IL  +++G S  ++A+ L  +++T+
Sbjct: 138 DAVMRGEQYLCTGAAGSLSPQSQTSREALTGREQTILLELAQGKSNKEVAQALDISVRTV 197

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213
             H+ N+  KLG+SS AGL   A     +
Sbjct: 198 ETHRKNIKRKLGISSTAGLTRYALEHGVL 226


>UniRef50_B8FDP3 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfatibacillum alkenivorans AK-01
           RepID=B8FDP3_DESAA
          Length = 219

 Score =  225 bits (574), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 82/218 (37%), Gaps = 16/218 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + + E   +   G++SL    +          +  +  +   +     ++   S  
Sbjct: 4   STIKILITEDHALVRKGLKSLISSRSEFQVVGEA-DNGLAAIEMTRKCKPDLILLDLSMP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
              +  GL+ + +L  + P  + LVI     +  LI +L     DG L K    +     
Sbjct: 63  ---KMNGLATMRQLKKERPEVKILVITMHASQDYLIPALKEGA-DGYLLKGDDPQELFMA 118

Query: 127 LFLSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
           +   ++G    +  L+            +   +   +L+  E+E+ + ++ G +  QIA+
Sbjct: 119 IRAIMDGKAYLSSDLSGQLIHSVINPDTREAADPLASLTQREKEVFQLVAEGNTNQQIAD 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            L  + KT+  H+ N+M KL + S   +   A     +
Sbjct: 179 LLFISPKTVDKHRTNLMKKLDLHSAREVSNFALKNGII 216


>UniRef50_D1XHI5 Two component transcriptional regulator, LuxR family n=4
           Tax=Streptomyces RepID=D1XHI5_9ACTO
          Length = 222

 Score =  224 bits (573), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 21/224 (9%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71
            + +   +   GI  L     G           E+    ++  +   V+      R    
Sbjct: 2   VVADDQAIVREGIVMLLGLLPGIEVVGAAKDGDEA-VALVAEKAPDVVLMDLRMPR---C 57

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
           +G+     +  + PRT+ +V+     +  L  +L      G L+K +  E   Q +   +
Sbjct: 58  DGVEATRRIRKEHPRTQVVVLTTFADDDSLFTALQAGA-RGYLTKDARGEEIVQAIDAVM 116

Query: 132 NGVRQATDRLNNQW----------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175
           +G    + ++  +                        L+P E E+L  ++ G S  +IA 
Sbjct: 117 SGEAGLSPKVQRRLLERVTGSETVPAPCALPSELPDGLTPREAEVLVLIAEGLSNREIAR 176

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
            L  +  T++ H  N+ +K G       +  A      R   TS
Sbjct: 177 ALHVSAATVKTHINNLFAKTGARDRTQAVRYAYGRGLARPPRTS 220


>UniRef50_B2J2N1 Two component transcriptional regulator, LuxR family n=12
           Tax=Cyanobacteria RepID=B2J2N1_NOSP7
          Length = 232

 Score =  224 bits (573), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 86/228 (37%), Gaps = 19/228 (8%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M++ +     + +++   +   G++++  +            + +   + ++ +    V+
Sbjct: 1   MKNDKSSPIRLLIVDDQSLIRQGLKAMLEQEPDLEVVGDA-ENGKVALELVAELQPDVVL 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                      +G +    +   FP  + LV++  D ++ L G++      G L K    
Sbjct: 60  MDIRMPEM---DGRTATKLIMQSFPNIKVLVLSTFDDDSYLTGAMRAGA-KGYLLKDMPS 115

Query: 121 EIFHQELFLSLNGVRQATDRL--------------NNQWYINQSRTLSPTEREILRFMSR 166
                 +    +G  Q    L              N     ++   ++  E+E+L  +  
Sbjct: 116 SELADAIRFGHSGYTQFGPGLFDKLLVTEAASASANQNSASSKPSEITAREQEVLCLIGV 175

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           G +  +IA+QL     T++ H  +++S+L + + + L   A+ +L   
Sbjct: 176 GATNREIAQQLYITEGTVKTHVTSILSRLNLKNRSQLAIYANSVLNQE 223


>UniRef50_C7QHJ1 Two component transcriptional regulator, LuxR family n=29
           Tax=Actinobacteria (class) RepID=C7QHJ1_CATAD
          Length = 222

 Score =  224 bits (573), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 15/218 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + +++   +   G+  +F    G           ++   A        V+      
Sbjct: 10  SPLRLLIVDDHPIVRDGLRGVFDGEDGFEVVGEASDGAQALVRAAESG-PDVVLMDLRMP 68

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+  +  L ++ P  R LV+   D E+ ++ ++      G L K +  E   + 
Sbjct: 69  TMG---GVEAIRRLRVEQPAVRVLVLTTYDTESDVLPAIEAGAT-GYLLKDAPREDLIRA 124

Query: 127 LFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
           +  +  G       +  +                  L+  E E+LR ++ G +  + A +
Sbjct: 125 VRAAAAGQPVLAPTVAQRLMTRVQTPLAEPAPPGDALTERELEVLRLVASGTTNRETARK 184

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           L  +  T++ H  +  +K GV   A  +  A     ++
Sbjct: 185 LFISEATVKTHLLHAYAKFGVRDRAAAVAEAYKRGLLK 222


>UniRef50_B8G137 Two component transcriptional regulator, LuxR family n=3
           Tax=Desulfitobacterium hafniense RepID=B8G137_DESHD
          Length = 217

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 80/220 (36%), Gaps = 18/220 (8%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           KK  + L +   +   G++ L                 E   D +  +    V+   +  
Sbjct: 3   KKLRIVLADDHAVLRAGLKVLLNAEPDLEVIGEASDG-EEAIDRVDDLHPDLVLLDLTMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
              +  G+ C+ EL  K    + LV+   D E  L   L       VL KA+ +E+    
Sbjct: 62  ---KLNGVDCIEELLKKHADLKILVLTMHDDEEYLKAVLQVGAKGYVLKKAADVELL-SA 117

Query: 127 LFLSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQI 173
           +     G       +  +                 + + LS  E E+LR ++ G++   I
Sbjct: 118 IRTVARGEMFIYPTMAAEFVYRHLVSPREPEKESKKLKQLSERELEVLRNLALGHTNQDI 177

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           A+ L  ++KT+  +K  VM KL +   A L+  A     +
Sbjct: 178 ADLLHVSVKTVETYKARVMEKLEMHKRAELVRYAMENGII 217


>UniRef50_C7RBI1 Two component transcriptional regulator, LuxR family n=1
           Tax=Kangiella koreensis DSM 16069 RepID=C7RBI1_KANKD
          Length = 212

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 76/215 (35%), Gaps = 15/215 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +   +   G+ SL  K A            E+ + A+        +   S    
Sbjct: 2   IRVMLADDHTILRQGLVSLLSKDADCTVVAEASNGLEAVEKALE-TRPQVAVIDISMPE- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  +  +  K P  + LV+   + +  +I  +      G L K S  E     + 
Sbjct: 60  --LNGMEVVKRIHDKLPECKILVLTMHEEQEYVIHMVRAGA-SGYLLKDSASEELIDAVK 116

Query: 129 LSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
               G    +    +          + + +  + L+  ERE+   +  G +   IA  L 
Sbjct: 117 ALATGKTYYSQYAASVLATQYSQPDKEWQDPYKNLTQREREVFHLVVDGKTTKDIARTLD 176

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            ++KT   H+  V+ KLGVS+ A L+  A     +
Sbjct: 177 ISVKTAENHRGKVLDKLGVSNTAELVRYAAKHNLL 211


>UniRef50_Q313W8 Two component transcriptional regulator, LuxR family n=3
           Tax=Proteobacteria RepID=Q313W8_DESDG
          Length = 223

 Score =  224 bits (572), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 47/223 (21%), Positives = 84/223 (37%), Gaps = 17/223 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           ++ + E   +   G++SL +               +   D   R     V+   S  R  
Sbjct: 6   SLIIAEDHTLLREGLKSLLQSVPHLIVTGEASDG-QMAVDLCDRNQPELVLMDISMPRM- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+     +  + P  R LV+        +  +L+    DG + K ++ + F   +  
Sbjct: 64  --DGVQATRLIKKRHPEVRVLVLTVHGAGEYVYAALAAGA-DGYVLKDASNDEFILAVES 120

Query: 130 SLNGVRQATD------------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            L G    +                 Q   +   TL+P E+EI + ++ GY   +IAE L
Sbjct: 121 VLGGKIYLSPGVSDAVVKGYLNDARGQSVSSSWETLTPREQEIFQLVAEGYKNREIAEML 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
             ++KT+  H+ N+M KLGV S A L   A     +    +  
Sbjct: 181 VVSVKTVEKHRSNLMQKLGVHSAAELRALALERGIILRMRSDG 223


>UniRef50_B1ZVM0 Two component transcriptional regulator, LuxR family n=5
           Tax=Bacteria RepID=B1ZVM0_OPITP
          Length = 219

 Score =  224 bits (571), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 82/220 (37%), Gaps = 16/220 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
                + L +   +   GI +L  K  G          +E+    +   +    I   + 
Sbjct: 2   PAPLKIVLADDHALVRAGIRTLLEKLPGVTIVGEAGDGRET-VTLVHTFAPDIAIMDITM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G      +A + PRT+ L+++    E  ++ +L      G L K +       
Sbjct: 61  PG---LNGFDATARIAREHPRTKVLILSMHTAEDYVLQALRAGAT-GYLLKDAATAELQL 116

Query: 126 ELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
            L     G    +  ++                  ++ L+P  REI++ ++ G S  +IA
Sbjct: 117 ALNAVRKGETYLSPSISKSVLARFRQQEQDPRAEPTKALTPRMREIVQLIAEGRSTKEIA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             L  ++KTI  H+ ++M++LG+   AG++  A     + 
Sbjct: 177 FLLNLSVKTIETHRMHLMARLGLHDVAGVVRYALRTGLIS 216


>UniRef50_B8FFJ9 Two component transcriptional regulator, LuxR family n=2
           Tax=Desulfobacteraceae RepID=B8FFJ9_DESAA
          Length = 212

 Score =  224 bits (571), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 80/216 (37%), Gaps = 14/216 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +  V+   G+  +          +     +E+    +        +   S    
Sbjct: 2   IRVLLADDHVIVRAGLRRIIEDSEDIKVIVEASNGKEAIDLTLEHC-PDVAVVDISMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL  ++ L  + P    L++   + E  ++ ++    +  +  K++  E     + 
Sbjct: 60  --IDGLEVVSRLHAELPDLPMLILTMHEEEQYVVRAIEAGAMGYMTKKSAP-EQLVTAIR 116

Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
              +G R  T+                 +   +LS  E ++LR ++ G++  +IA+    
Sbjct: 117 KLHSGSRFLTEEAAELLALRVSRWSKGGSLLDSLSKRELQVLRHLASGHTNREIADSYHI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           ++KT+  ++  ++ KL + ++A +   A     +  
Sbjct: 177 SVKTVDTYRARLLKKLNLRNNADISRFAIQNNLINP 212


>UniRef50_A5F1Q5 Transcriptional regulator, LuxR family n=54 Tax=Gammaproteobacteria
           RepID=A5F1Q5_VIBC3
          Length = 216

 Score =  224 bits (571), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 12/221 (5%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           ME    K   V +++   +   G  +   +              E+  + +       V+
Sbjct: 1   MEVFMDKPIRVVMVDDHQVVLDGFIARLEQEPEIEVVATASNGLEAL-ELVKLHQPDVVL 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S        G+     +  + P T+ L++   D    ++  +    +  +L + S L
Sbjct: 60  MDVSMP---IMNGIEATRLIKEEVPHTKVLMLTMHDNREYIMQVMQAGAMGYMLKEISAL 116

Query: 121 EIFHQELFLSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQI 173
           +   Q +     G     +   +           N+   LS  E  ILR +++G S  +I
Sbjct: 117 K-MVQAIKTVHQGATYFCESTTSTLFSQEILPVANKPNPLSRREEAILRMVAQGCSSKKI 175

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           A  L  + +T+  H+ N+  KL + S A L + A     + 
Sbjct: 176 ATLLNISYRTVETHRQNIKHKLDIHSTAELAQYALQHGLLE 216


>UniRef50_A0R9S0 DNA-binding response regulator n=37 Tax=Bacillus RepID=A0R9S0_BACAH
          Length = 216

 Score =  224 bits (571), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 14/218 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           K   + +++        I S+    +         +  +   + +       ++   +  
Sbjct: 3   KMIKILVVDDHAFLRDAIRSILEDESDMNVVGEASSG-DGVLEKVEACRPDCILMDINLP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
               + G+     +   +P  R LV    + +  L+ +L     DG L K S+ E     
Sbjct: 62  G---KNGIEATELVKKNYPNCRVLVFTMYEHDEYLMDALQAGA-DGYLLKDSSSEQVVAA 117

Query: 127 LFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
           + +   G      R+  +            +    L+  E+EIL  + +G S  +IAE L
Sbjct: 118 IRMLYRGDSVIHPRMTKKLITYHQQKMKVESNENELTEREKEILFELVKGLSNKEIAEAL 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
             + KT++ H   +  KL V S +  +  A     +  
Sbjct: 178 YISDKTVKIHINKIFKKLNVKSRSQAVIYAVRNQLVPL 215


>UniRef50_B8D0J2 Two component transcriptional regulator, LuxR family n=1
           Tax=Halothermothrix orenii H 168 RepID=B8D0J2_HALOH
          Length = 211

 Score =  223 bits (569), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 10/215 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K   V + +   +   GI  L   +             E+ +          V+   + 
Sbjct: 1   MKPTKVLVADDHDLVREGICKLLELYEDIKVVGEAGDGLETVKGVRDHF-PDLVLLDLNM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
            R     G++ + ++    P  + L++   D E  +   +     +G + K    E   +
Sbjct: 60  PRMG---GITAIKKIKEISPGIKVLILTIHDEEEYVYEVIRSGA-EGYIQKDVKPEELKR 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-----TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +   + G +       N+     +       LS  E+E+L  +++G S  QIA++L  +
Sbjct: 116 AIDKVIKGDKVFPRSTENEVREVVNEKYEVCELSSREQEVLELLAQGMSNKQIAQELFIS 175

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            KT++ H  N++ KL V+     +  A     +  
Sbjct: 176 EKTVKNHVSNILRKLSVNDRTQAVIVALKRGLVSL 210


>UniRef50_C9LUT0 DNA-binding response regulator UhpA n=1 Tax=Selenomonas sputigena
           ATCC 35185 RepID=C9LUT0_9FIRM
          Length = 216

 Score =  222 bits (568), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 82/220 (37%), Gaps = 12/220 (5%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           ME+ + +   + L +   +   G+  L                +E+ + A ++      +
Sbjct: 1   MENKK-EPLRILLADDHRVLRKGLSLLLSSEEDFSVVAEASDGEEALEKA-AKTPVDIAL 58

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S        GL CL  L    P  R L++        +   L     +G L K +  
Sbjct: 59  LDLSMPHMG---GLECLRRLKAMQPAVRVLILTMHSERQYVCECLRAGA-NGYLCKDTLD 114

Query: 121 EIFHQELFLSLNGVRQATDRLNNQW------YINQSRTLSPTEREILRFMSRGYSMTQIA 174
               + L     G R   +R              +   LS  ERE+L  +  GYS++ IA
Sbjct: 115 AELFRALRTVAAGGRYLGEREAELLIDGALEEPEEPAALSTREREVLELIVHGYSLSTIA 174

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           ++L  +IKT+  +K  ++ KL  + ++ L++ A     + 
Sbjct: 175 DKLYLSIKTVSTYKTRLLQKLDCTQNSELVDYALRHNILG 214


>UniRef50_Q46VQ7 Regulatory protein, LuxR:Response regulator receiver n=32
           Tax=Betaproteobacteria RepID=Q46VQ7_RALEJ
          Length = 231

 Score =  222 bits (567), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 14/216 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSR----ISFAA 58
           HS      V LI+   +   G+           Y +      E+    + R         
Sbjct: 13  HSIDAPARVLLIDDHALVRDGMRMHLTLQPDL-YVVGEADGGEAALAWLERAGARERPDL 71

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
           VI            G++    L  ++P    LV++  D       ++      G + K +
Sbjct: 72  VITDIGMRGMG---GIALTAALHEQYPEIAVLVVSMHDNLEYARQAVRAGA-RGYVLKDA 127

Query: 119 TLEIFHQELFLSLNGVRQATDRLN-----NQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
             +     +   L G    + R+                L+  ER+IL  + RG +  +I
Sbjct: 128 PADELMAAIEAVLAGRVFYSARIARGMAEQMPATGPLDALTRRERDILGCIGRGMANKEI 187

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           A QL  +++T+  H+ N+  KLG+   AGL++ A  
Sbjct: 188 ATQLGVSVRTVETHRLNLKRKLGIEGRAGLVKYAVE 223


>UniRef50_B8GAC9 Two component transcriptional regulator, LuxR family n=3
           Tax=Chloroflexus RepID=B8GAC9_CHLAD
          Length = 213

 Score =  222 bits (567), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 81/215 (37%), Gaps = 14/215 (6%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+  L               S+ +   A + +    ++   S      
Sbjct: 4   ILLVDDHAVLRAGLRLLLESQPDMVVVGEAEDSRTAITQA-TTLQPDLILLDLSL---TN 59

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             GL+ +  L    P+ R LV+   D E  +  +L+     G + K +        +   
Sbjct: 60  SSGLAAIQSLRAAAPQARILVLTMHDDEGYVRQALAAGA-HGYVLKRAADAELIAAIRAV 118

Query: 131 LNGVRQATDRLNNQW---------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           L G       L  +            N   +LS  ERE+L  ++RGY+  +IA QL  + 
Sbjct: 119 LRGELYIHPALTRRLLEDILPQPQPTNPWESLSEREREVLVLVARGYTAAEIAGQLNLSP 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           KT+  ++   M KLG+ S A L++ A     +   
Sbjct: 179 KTVETYRTRGMEKLGLRSRAALVQFALDHNLLVPP 213


>UniRef50_Q11YW8 Two component transcriptional regulator, LuxR family n=1
           Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YW8_CYTH3
          Length = 215

 Score =  222 bits (566), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 90/219 (41%), Gaps = 16/219 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK ++ + +   +   GI+SL +               +     +  +    V+   + 
Sbjct: 2   MKKISIIIADDHTLIRDGIKSLLQSVDEFEVVGEATDG-DELIQFIDTLDPEIVVLDITM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
               ++ G+  +TE+     R + +V++  D    ++ S+    L   L K +  E   +
Sbjct: 61  P---KKSGIEVITEVKKYNNRVKFIVLSMHDNPEYVLKSVQSGALS-YLLKNTDHEEIIK 116

Query: 126 ELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIA 174
            +     G +  +  + +                 + TL+  E E+L+ +S G S   IA
Sbjct: 117 AVKAVSAGQKYFSPDIYSIILNGLANPELVKASQIAETLTKRELEVLKEVSMGLSTKLIA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           ++L  +++T+  H+ N+M KL V + A L++ A  L  +
Sbjct: 177 DKLFISVRTVETHRINLMKKLDVHNSAELIKKAMDLNII 215


>UniRef50_Q485W6 DNA-binding response regulator n=3 Tax=Alteromonadales
           RepID=Q485W6_COLP3
          Length = 215

 Score =  222 bits (566), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 90/219 (41%), Gaps = 10/219 (4%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M + +    +V +++   M   G+++    +        T    ++   A+  +    ++
Sbjct: 1   MSNLKELPVSVQIVDDHPMVQGGLKACLSFYDDIIIVGSTDDGSDALNKAIE-LKPDVIL 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S        G+     +  + P T+ L+++       +  ++    + G L K +T 
Sbjct: 60  MDISMPTM---NGIDATEIITEQLPETKVLILSMHSNPEFVKSAIQAGAV-GYLLKDTTS 115

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQ-----SRTLSPTEREILRFMSRGYSMTQIAE 175
           E  +  +    NG    +  +      N      S  L+  E+ +L ++++G +  +IA+
Sbjct: 116 EEIYYAIKAVANGKTHFSSSIAKLLIDNPVNTNESEKLTTREQVVLSYLAKGKTSKEIAK 175

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            L  + +T+ AH+ N+ +KLG+ S A L+  A     ++
Sbjct: 176 ILNISFRTVEAHRRNMKTKLGIHSLAKLISYAVKHGIIK 214


>UniRef50_Q3JFS6 DNA-binding response regulator, LuxR family n=92
           Tax=Burkholderiales RepID=Q3JFS6_BURP1
          Length = 282

 Score =  222 bits (566), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 81/222 (36%), Gaps = 13/222 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
                V + +   +   G+  + +  +G       + S  +    +       ++   S 
Sbjct: 66  PPMIKVLIADDHALVRDGLRHILQNASGYEVAGEAFDSATT-IALVRSTPAQVLVLDLSM 124

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                R G+  + ++  + P  R LV+     +   + +       G L+K S       
Sbjct: 125 PG---RNGVELIKQIKEEKPALRILVLTMHAEQQYAVRAFRAGA-SGYLTKESASSELVG 180

Query: 126 ELFLSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            +    +G    +  +  ++  +            LS  E ++ R ++ G ++TQIA++L
Sbjct: 181 AVTKVASGGVYVSLAMAERFAQSLNEPAETLPHHRLSDREFDVFRRIASGQTLTQIADEL 240

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
             + KT+  +K  ++ K+ +  +A L+  A     +   +  
Sbjct: 241 CVSAKTVSTYKTRILEKMQMPHEAALVRYALRHKLIDDPDED 282


>UniRef50_B9XL75 Two component transcriptional regulator, LuxR family n=1
           Tax=bacterium Ellin514 RepID=B9XL75_9BACT
          Length = 234

 Score =  222 bits (566), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 17/224 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
            R K   V L +   +   G+ S                 QE+    +  +S   V+   
Sbjct: 14  KRKKTIKVLLADDHPVVRKGLGSCLNNLEHIEIVGEAVDGQETVSK-VRELSPEIVLMDL 72

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
                    GL     +  +FP  + L+++    +  ++  +      G + K + L   
Sbjct: 73  DMPTM---SGLEATKIIRREFPLVKVLILSIHTNKDYVLQIIKSGA-QGYVLKDAPLTEL 128

Query: 124 HQELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGYSMT 171
            + +     G    +  ++                   S+ L+  E E+L  ++ G S  
Sbjct: 129 VRAIESVHGGGAFFSPDISQIMLDQYLAEATNGEESGNSKKLTNRETEVLSMIAEGQSNK 188

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           ++A ++   ++T+  H+  VM+KL + + AGL + A     ++ 
Sbjct: 189 EMASRMGVGVRTVETHRERVMNKLDIHNVAGLTKYAIAHGIIKL 232


>UniRef50_B4D6Y1 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D6Y1_9BACT
          Length = 220

 Score =  222 bits (566), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 78/220 (35%), Gaps = 17/220 (7%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L +   +   G+ +L    +           + +       ++   VI   S   
Sbjct: 6   KTRILLADDHDIVRRGLRTLLELRSDWEICAEASDGR-AAVQFAEDLAPDIVILDLSMPE 64

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                GL     +A   PR+R L++   + E  +  +L  + + G + K          +
Sbjct: 65  ---LNGLEAARRIAAHCPRSRMLMLTMHETEQFVREAL-AAGVRGYILKTDAGRDLANAV 120

Query: 128 FLSLNGVRQATDRLN------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
              + G      RL              +        L+P EREIL+ ++ G     + +
Sbjct: 121 DALIRGETFFASRLAATIYAAEFAGMGRRRRSKSQAGLTPREREILQLLAEGRKNRDVGK 180

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            L  ++KT   H+  +M+KLG+ S A L+  A     +  
Sbjct: 181 ALNISVKTAETHRARIMAKLGIDSVADLVRYAIRNGLIAP 220


>UniRef50_Q2LSF1 Two-component response regulator n=4 Tax=Deltaproteobacteria
           RepID=Q2LSF1_SYNAS
          Length = 217

 Score =  221 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV L +   +   G+ +L                Q++       +    +I   S     
Sbjct: 4   NVLLADDHKIVRDGLRTLLETHGSMNVVAEAENGQKT-ITLARELHPEIIIMDISMP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+    ++    P  + + ++       +IG L      G L K    E     +  
Sbjct: 60  DMNGIDATRKITSDLPGIKVIALSMHADRHFVIGMLEAGA-SGYLLKDCAFEELVNAIQT 118

Query: 130 SLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            L+     +  + +    N            S  L+P ERE+L+ ++ G S  QIA  L 
Sbjct: 119 VLSNHTYLSPTIADIVVKNYVHKAAGTSVVVSSELTPRERELLQLLAEGLSAKQIAANLH 178

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
            ++KT+  H+ N+  KLGV S A L++ A     
Sbjct: 179 VSVKTVETHRRNITQKLGVGSVAELIKYAIREGL 212


>UniRef50_UPI00016C48EF two-component response regulator n=1 Tax=Gemmata obscuriglobus UQM
           2246 RepID=UPI00016C48EF
          Length = 220

 Score =  221 bits (565), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 74/219 (33%), Gaps = 9/219 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + +  + L +  V+   G+ +L              +  E+  D +       +    S 
Sbjct: 1   MPRTRIVLADDHVILREGLRALISAQPDLEVVGEAASGTET-VDCVRATEPRVLCLDLSM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                    + +T +    PRTR LV+   +  A +  +L+       L K +       
Sbjct: 60  PGWGSA---TTITRVTQLAPRTRVLVLTMHNDPAYVRSALAAGAAGYFL-KTTPSPDLLA 115

Query: 126 ELFLSLNGVRQATDRLN----NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            +     G R     L           +   LS  E E+L  + +G +  +IA+QL  ++
Sbjct: 116 AIRAVATGARVIDPALGDVLGGPPPPAERSQLSRRETEVLELLVKGLTHQEIADQLFLSV 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
           KT+  ++  +  K G+ + A  +        +       
Sbjct: 176 KTVETYRARLREKTGLKTRADYVRYGLEAGLLGATPVEG 214


>UniRef50_A4CN07 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Robiginitalea biformata
           HTCC2501 RepID=A4CN07_9FLAO
          Length = 217

 Score =  221 bits (564), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 50/219 (22%), Positives = 87/219 (39%), Gaps = 12/219 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             +AL++   +   GI S+  +  G           E   + +       V+        
Sbjct: 2   IRIALVDDHRLFLEGIRSILDREIGLEVHASVGQGVE-LLNLLKTTRADVVLTDIRMPGM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GLS   ++   FP TR + +   D E  +   L       ++ K    E   Q + 
Sbjct: 61  ---DGLSLTRQICRSFPNTRVIALTMLDHEQDVKDLLDAGARGYLV-KNVEKEELVQAIH 116

Query: 129 LSLNGVRQATDRLN-------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G    + +         +Q    +S  L+  ER++L  +++G +  QIAE LK + 
Sbjct: 117 TVARGDYYLSRKFRPIYKNWKSQEPRQESVRLTRRERQVLELIAQGRTSQQIAESLKLSR 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
            TI  H+ N+  K+G+ S+ GLL+AA   L     +T N
Sbjct: 177 FTIDTHRKNIHKKMGIRSNIGLLKAASKWLGQAPQDTDN 215


>UniRef50_C1F9F6 Two-component response regulator n=2 Tax=Bacteria
           RepID=C1F9F6_ACIC5
          Length = 213

 Score =  220 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 6/211 (2%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           +      + +++   +   G+ +L     G           E+             I   
Sbjct: 5   THTATIRILVVDDHHIVRQGLVALLNTLPGFEVIAEAGDGVEA-IALHREHQPDITIMDL 63

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
              R     G+  +T +  + P  R +V+   D +  +  +L      G L K    +  
Sbjct: 64  RLPRM---NGVEAITRIREESPGARIVVLTTFDGDEDIYRALQAGA-RGYLLKGMDADDL 119

Query: 124 HQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
              +     G  +    +  +         L+  E ++LR + +G S  +IA  L  +  
Sbjct: 120 TAAIRSVHAGKSRIPTVVAERLAERMSGSELTARELDVLRLIVQGRSNREIAADLHISEA 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           T++ H  N++SKLGVS        A     +
Sbjct: 180 TVKTHINNLLSKLGVSDRTQAATTALQRGLV 210


>UniRef50_B9XC41 Two component transcriptional regulator, LuxR family n=7
           Tax=Verrucomicrobia RepID=B9XC41_9BACT
          Length = 267

 Score =  220 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 17/236 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           + H  +    V L +   +   G+ +L              T +E+      +++   ++
Sbjct: 23  LTHKSMPNIRVLLADDHTVVRQGLRALLSGEKDIQIVGEAGTGREA-VQMAQKLTPDVIL 81

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +        GL    ++A   P  + LV++    +  +   L+ +   G L K +  
Sbjct: 82  MDIAMPLM---NGLEATRKIAEVAPSAKVLVLSSYGEDDYV-QKLTEAGASGYLIKHAAA 137

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGY 168
                 +  +  G    +  +  +                    L+  E E L  +  G 
Sbjct: 138 NDLVAAVRETHKGNAFFSPGIAKRLRDQVRAGFANGNGTKASFELTERELETLGHIVAGK 197

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP 224
               IA  +  +IKT+  H+  VM+KL +   A L   A     +     S + +P
Sbjct: 198 PNKVIACDMGISIKTVEKHRQQVMNKLNIHEVASLTRYAIAKGMIDANGQSLMPNP 253


>UniRef50_C1A9U5 NarL family two-component response regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A9U5_GEMAT
          Length = 223

 Score =  220 bits (563), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 76/219 (34%), Gaps = 15/219 (6%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
                 V + +   +   G+  +     G          + +   A+  +    V+   +
Sbjct: 7   PTAPIRVLIADDHALVREGLRYVLDADPGIEVVGEASNGRTAVDLALQHV-PDVVVLDIT 65

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   GL     L    P TR L+++  D    +   +      G L K S  E   
Sbjct: 66  MPEE---SGLKAAARLREALPDTRVLLLSMHDQGEYVREGMRIG-THGYLLKDSAGEELR 121

Query: 125 QELFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIA 174
             +     G    +  +  +              Q   L+P ER++L  ++RG +   IA
Sbjct: 122 AAIRAVHAGGTFFSPAVVRRLTSTEVVSEGAPAAQLDLLTPRERDVLAGVARGLTNKAIA 181

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            +L  + +T+ AH+ ++M KL + S AGL   A     +
Sbjct: 182 AELGISRRTVEAHRESLMRKLQIHSVAGLTRFALETGII 220


>UniRef50_D1AAU8 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermomonospora curvata DSM 43183 RepID=D1AAU8_THECD
          Length = 220

 Score =  220 bits (562), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 70/214 (32%), Gaps = 16/214 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+  L     G        +  ++     + +    V+        
Sbjct: 10  IRVLITDDHPVFRQGLRGLLEAL-GVEVVGEAESGPQA-VQLAAELQPDVVVMDLHMPGG 67

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+     +    PR   LV+     +  +  ++      G L K S  E   + + 
Sbjct: 68  ---NGIEATRTITRTSPRIGVLVLTMFRDDDSVFAAMRAGA-RGYLLKESGAEEIARAVR 123

Query: 129 LSLNGVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
               G       +  +                  L+  ERE+L+ +++G S  +IA+ L 
Sbjct: 124 AVAAGEAIYGPEIARRVLTYFADMPDPKQTAFPELTEREREVLQLIAQGRSNGEIAQTLF 183

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
            + KT+R H  N+  KL V+  A  +  A     
Sbjct: 184 LSPKTVRNHVSNIFMKLHVADRAQAIVLAREAGL 217


>UniRef50_A5G586 Two component transcriptional regulator, LuxR family n=8
           Tax=Bacteria RepID=A5G586_GEOUR
          Length = 226

 Score =  220 bits (562), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 78/215 (36%), Gaps = 16/215 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G++++                +E+ + A   +    V+   +    
Sbjct: 13  IRVLLVDDHKIMRKGLKAILALEHTIEVVAEAANGREAIRKADELL-PDVVVMDLTMPEM 71

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  + ++    P  R LV++     A ++ +       G L K   +E     + 
Sbjct: 72  ---NGIEAIRQIVAAHPDVRTLVLSMVLDRACVMETFKAGAT-GYLLKDCAVEELVGAIH 127

Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
              +G      ++            +    +    LS  ERE+L+ ++ G S  +IA   
Sbjct: 128 TVASGEPYLCPQITSLVIRDYTKGADANSSDSCVQLSKREREVLQLIANGNSTKEIAFTF 187

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
             +IKT+   + +VM KL + + A L + A     
Sbjct: 188 GVSIKTVAVQRMSVMKKLNLFNVADLTKYAVREGL 222


>UniRef50_C7RMN3 Two component transcriptional regulator, LuxR family n=1
           Tax=Candidatus Accumulibacter phosphatis clade IIA str.
           UW-1 RepID=C7RMN3_9PROT
          Length = 213

 Score =  220 bits (561), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 80/208 (38%), Gaps = 12/208 (5%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +K  + L++   +   G+  L  +            + E     + +  F   +      
Sbjct: 4   RKLQILLVDDHAVVRGGLRLLLAQTDDMEVVSEA-ENAEQAISMIRQNEFDVALVDIGLP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL  L ++  + PR   L+++    E   + +L      G L+K S        
Sbjct: 63  GKG---GLDLLKQIKAERPRIAVLMLSMYAEEVYAVRALKAGA-SGYLTKNSPPGTLLAA 118

Query: 127 LFLSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +     G R  +  L  Q          + S  LS  E E+LR ++ G S+TQIAE L  
Sbjct: 119 IRKVAGGGRHVSPALLEQLAVEVGQGRKSASDALSDREIEVLRRLASGESLTQIAEALHL 178

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           + KT+  ++  ++ K G+ S+A L   A
Sbjct: 179 SPKTVTTYRARIVEKTGLHSNAELTRYA 206


>UniRef50_O07528 Uncharacterized transcriptional regulatory protein yhcZ n=3
           Tax=Bacillus RepID=YHCZ_BACSU
          Length = 214

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 16/211 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G+   F             T  E+ +  +       V+   S    
Sbjct: 1   MKIVIADDHHVVRKGLRFFFATQDDIEVVGEAATGLEALR-VIEETKPDLVLMDLSMPEM 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+  + +   +FP T  +V+     +  +I +L        L      E+      
Sbjct: 60  ---DGIQAIKKAIQQFPDTNIIVLTSYSDQEHVIPALQAGAKAYQLKDTEPEELVKT--R 114

Query: 129 LSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
               G  + +  +           +     +   L+  E+++L  ++ G S  +IA  L 
Sbjct: 115 QVHGGEYKLSTAIMPHVLTHMKNQHDPEKEKYYQLTRREKDVLTEIANGKSNKEIAAALF 174

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            + KT++ H  N+++KL V+        A  
Sbjct: 175 ISEKTVKTHVSNLLAKLEVADRTQAALFAVK 205


>UniRef50_B9XAQ5 Two component transcriptional regulator, LuxR family n=1
           Tax=bacterium Ellin514 RepID=B9XAQ5_9BACT
          Length = 229

 Score =  220 bits (561), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 16/219 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           S  K   + L++   M   G+  +               + ++  + +       V+   
Sbjct: 8   SPAKATKILLVDDHPMMREGLRQIIGNEIDLAVCGEAENAFQAL-ELVKSEKPDLVLADI 66

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           +      + GL  L +L  + P+   LVI+  D        L      G + K    +  
Sbjct: 67  TLP---DKNGLELLKDLQAQHPKLPVLVISMHDEALYAERVLRAGG-RGYIMKHEGGKKI 122

Query: 124 HQELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQ 172
            Q +   L+G    +++++ +              +    L+  E E+ R +  G S  +
Sbjct: 123 MQAIRHVLSGQIFVSEKMSARILELFSGHGTQAASSPIENLTDREFEVFRLIGEGLSTKE 182

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           IA  +  + KT+  H+ N+ +KLG+ + A L+      +
Sbjct: 183 IAANMHVSAKTVEVHRMNIKTKLGLKTAAELIRYTVRWV 221


>UniRef50_B1M5J4 Two component transcriptional regulator, LuxR family n=7
           Tax=Bacteria RepID=B1M5J4_METRJ
          Length = 222

 Score =  219 bits (560), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 77/216 (35%), Gaps = 17/216 (7%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           +  VAL +   +   GI +L              +  E+    +        +   S   
Sbjct: 4   RIRVALADDHPIVLAGIRTLLNADPEIELVGEATSGSEAL-PMIHAADPDVAVVDVSMPG 62

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                GL     +A   PRTR LV+   +  A +   L      G L K S  E   + +
Sbjct: 63  ---LNGLELTERVAGSCPRTRVLVLTVHEDAAYVQPLLKAGA-RGYLLKRSAAEDLLRAV 118

Query: 128 FLSLNGVRQATDRLNNQWYINQS------------RTLSPTEREILRFMSRGYSMTQIAE 175
                G       + +    + +              LSP E ++LR +++G+S  +IA 
Sbjct: 119 RAVAAGGIYLDPSVASHAMAHPATPTQGGDTEPSAEALSPRETDVLRLIAQGFSNKEIAR 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           +   ++K+I  +K     KLG+ + A ++  A    
Sbjct: 179 RFDLSVKSIETYKARAAEKLGLRTRAEIIRYAAAHG 214


>UniRef50_B3DW63 DNA-binding response regulator, NarL family (REC-HTH domains) n=7
           Tax=Bacteria RepID=B3DW63_METI4
          Length = 243

 Score =  219 bits (559), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 16/212 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V +++   +   G+  L     G         +     + + +     V+   S     
Sbjct: 20  KVLIVDDHAILREGLIQLINSTPGLS-VCGAAKNAHEGFELIEKTMPDVVLVDISLPG-- 76

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
            + GL  + ++   +P    LV++  +        L      G L K    +     +  
Sbjct: 77  -KSGLELIKDIHAAYPDIALLVLSMHEESLYAERVLRAGA-RGYLMKNEGGQKLIAAIQK 134

Query: 130 SLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            L G    ++R+ N+             I+    LS  E E+ + + +GY   QIAEQL 
Sbjct: 135 VLAGGISVSERVANRILQGVSGKRKALSISPIEALSDREFEVFQLIGKGYGSRQIAEQLS 194

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            ++KT+ A++ ++  KL + S   L+  A   
Sbjct: 195 LSVKTVEAYRASIKQKLYLKSGPQLVHYAISW 226


>UniRef50_C2C4B6 Transcriptional regulator n=1 Tax=Listeria grayi DSM 20601
           RepID=C2C4B6_LISGR
          Length = 214

 Score =  219 bits (559), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 15/209 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +    ++ +                 E+F   +       V+   S    
Sbjct: 1   MKLLIADDHAVVRSALKFMINAQKDMEVIGDAADGTEAFL-FIESNRPDIVLMDLSMP-- 57

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL     +   FP T+ +++   D EA +  +L      G + K S+ E+    + 
Sbjct: 58  PGENGLLTTKRITEAFPETKVILLTMHDEEAYITQALQAGA-QGYIMKNSSEELLLDAIR 116

Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
             + G                         N    LS  E+EIL  ++ GY   +IAE+L
Sbjct: 117 SVMGGQIIIDPVFNYSSKQIEQLKRADASENIIERLSKREKEILPLIALGYGNKEIAERL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
             + KT+  HK ++M KL +   + LL  
Sbjct: 177 FISAKTVEVHKSHIMKKLEMKKFSDLLRF 205


>UniRef50_C4V1Z2 Transcriptional regulator n=1 Tax=Selenomonas flueggei ATCC 43531
           RepID=C4V1Z2_9FIRM
          Length = 209

 Score =  219 bits (559), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 89/213 (41%), Gaps = 16/213 (7%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71
            +++  ++   GI+ L +  +         + +E+ +  +++     VI   S       
Sbjct: 1   MIVDDHLLIRAGIKLLLKNTSAYTVTAEAESGEEALR-LLAQQPIDLVIMDISMPGMG-- 57

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
            GL+C+ E+   +P  + LV++  + E  +  ++    + G L K S        L +  
Sbjct: 58  -GLACIREIRAHYPAVKILVLSMHEDEEYIYKAMQYGAM-GYLPKTSADNELFDALQVLS 115

Query: 132 NGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            G R  +            R   +   +    L+  ERE+   +  GY++T+IAEQL  +
Sbjct: 116 QGRRYLSPNAQQSLMDIMFRPAEEAADDPRSVLTAREREVFDELIHGYTITEIAEQLHLS 175

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +KT+  HK ++  KL  S  + L+  A     +
Sbjct: 176 VKTVDTHKKHIYEKLHCSRRSELVTLALRNGLL 208


>UniRef50_D1Y661 DNA-binding response regulator, LuxR family n=1 Tax=Pyramidobacter
           piscolens W5455 RepID=D1Y661_9BACT
          Length = 216

 Score =  219 bits (558), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 78/212 (36%), Gaps = 16/212 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +   M   G+  L  K  G           E+   A  R+     +   +  R 
Sbjct: 3   IRVLLADDHEMFLEGLRELLGKADGIELAGLARDGAEA-VAAAERLQPDVALMDMTMPR- 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+    ++A   P T+ LV++    +  ++ SL      G + K  + +     + 
Sbjct: 61  --LNGIQATQKIAAGSPGTKVLVLSMHGDKNLIVESLKAGA-RGYVLKECSSQELCLAIQ 117

Query: 129 LSLNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
              NG    T            RL           LS  E ++L+ + +G +  QIAEQL
Sbjct: 118 TVANGQYYLTPAILSTLIGDYLRLTENEEQGSDCPLSERELDVLKLLVKGCNAKQIAEQL 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
             +  T+  H+ +++ KLG +S A L   A  
Sbjct: 178 SISKNTVDTHRRHILDKLGCNSMAELTRYAIR 209


>UniRef50_C6E3E1 Two component transcriptional regulator, LuxR family n=4
           Tax=Deltaproteobacteria RepID=C6E3E1_GEOSM
          Length = 223

 Score =  218 bits (557), Expect = 9e-56,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 85/221 (38%), Gaps = 17/221 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K+ V +++   +   G++SL  + A            E+       +    V    S 
Sbjct: 1   MGKKRVLIVDDHPLFREGVKSLVERSANYQAVGEAGCGAEAL-ALAQELKPDLVTMDVSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF-- 123
                  G+  +  +    P TR L+++       +  +        V+ + +T  +   
Sbjct: 60  P---DMSGIEVVRGILDLAPETRILMLSMYPKFDYVAEAFKAGAKGYVVKETTTARLIQG 116

Query: 124 -----HQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172
                  E F+     +    +L      +Q+        L+P E+++LR ++ G S  Q
Sbjct: 117 FDALCRGEFFVDGQVSQDLVAKLAQGAARDQALQDEKYGLLTPREQQVLRLVAEGSSTRQ 176

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           IA  ++ + KT+  H+ N+M KL V S   L++ A  L  +
Sbjct: 177 IAAAIELSPKTVENHRTNLMKKLDVHSKMELVKYAARLGLI 217


>UniRef50_B5YIR2 Response regulator UvrY n=1 Tax=Thermodesulfovibrio yellowstonii
           DSM 11347 RepID=B5YIR2_THEYD
          Length = 213

 Score =  218 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 92/216 (42%), Gaps = 13/216 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
            K+  V +++   +   G++ +              +  E+  D +S+ SF  V    + 
Sbjct: 2   TKRLKVLIVDDHTLFRKGLKEILLDTPYIKECKEAKSGYEA-IDILSKESFDIVFLDIAM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+  L ++ I +P T+ L+++    E   I SL      G L+K++  E   +
Sbjct: 61  ---SDINGIETLKKIKILYPETKILMLSMYPEEQYAIRSLKCGA-SGYLTKSADPEELLK 116

Query: 126 ELFLSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            +   + G +      + +          I     LS  E ++   +++G S+ +I+++L
Sbjct: 117 AVDKIIKGGKYLPHTFSEKLLHYIDKSEDIPPHEKLSEREFQVFLMIAKGKSLIEISKEL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
             +IKT+  ++  ++ KLG+ ++A ++  A     +
Sbjct: 177 SISIKTVSTYRARILEKLGLENNAEIINYAIKHGLI 212


>UniRef50_D1C6S1 Two component transcriptional regulator, LuxR family n=1
           Tax=Sphaerobacter thermophilus DSM 20745
           RepID=D1C6S1_SPHTD
          Length = 223

 Score =  218 bits (556), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 78/222 (35%), Gaps = 15/222 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + + ++ L++   +   G+ SL              + +E+ + A   +    V+     
Sbjct: 1   MSQISLLLVDDHALFREGLASLLSYQPDFTVVGEAASGEEAVERA-RELVPDVVLMDIDL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+     +  + P  R +++   D   RL  S+       ++    + E+  Q
Sbjct: 60  PG---IDGIEATRRIKRQLPEVRVVMLTVYDDHERLFQSIKAGAQGYLIKNIRSAELLDQ 116

Query: 126 -----------ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
                         ++   + +          +     LSP E E+L  ++   S  +IA
Sbjct: 117 LRGLARGEAAISRRMAARILEEFARLERQAEILEPDGGLSPREVEVLELVALRLSNKEIA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
            +L  +  T++ H  N+++KL +SS       A     +   
Sbjct: 177 ARLSISEHTVKNHLKNILAKLQLSSRRQAAAYAVAHGLIPPP 218


>UniRef50_C0Q9H4 Two component transcriptional regulator (LuxR family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0Q9H4_DESAH
          Length = 217

 Score =  218 bits (556), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 75/217 (34%), Gaps = 16/217 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K   V + +   M   GI  +     G           E   + +S      VI   S 
Sbjct: 1   MKACRVVIADDHAMLRRGICQVIETQEGVSVVGEVGDGIE-LLNLLSTQPADLVILDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
               +  G+    ++   +P  + L ++       L  + S    +G L K  T      
Sbjct: 60  P---KMSGIEAAKKIRATYPGIKILFLSMHKRNEYLYHAFSAGA-NGYLLKEDTDTEILT 115

Query: 126 ELFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIA 174
            +   L G    +                        TLSP E E+L  ++ G S  +IA
Sbjct: 116 AMDTILEGKAFLSSIFTKDMPDILTDMVKNGSSFPGGTLSPREEEVLTLLAEGKSNKKIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           + L  + +T+  H+ ++M +L + + A L++ A    
Sbjct: 176 DILCISTRTVEHHRASIMKRLDLRTLADLIKYAIRHG 212


>UniRef50_A9FM25 DNA-binding response regulator n=1 Tax=Sorangium cellulosum 'So ce
           56' RepID=A9FM25_SORC5
          Length = 233

 Score =  218 bits (556), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 15/224 (6%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M  +   K ++ LI+   +   G                  T+ ++ ++  +      V+
Sbjct: 14  MAETPASKLHIYLIDDHPVVREGFARALSDEPDMVVVGQAGTAADALRET-ASCKPDVVL 72

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +      R+G+  L  L  + P+ + LV++  D E R+  +L       ++ K S L
Sbjct: 73  VDLNIP---DRDGIELLGALRAQLPQAKLLVLSGYDDEFRVAEALRAGAQGYLV-KTSKL 128

Query: 121 EIFHQELFLSLNGVRQATDRLNNQ----------WYINQSRTLSPTEREILRFMSRGYSM 170
           E   + +     G    +  +                     L+P ER++LR ++ G S 
Sbjct: 129 EEVIEGIRRIATGGAPLSSSIAGAVVRAMRKPASEGSGGLDALTPRERQVLRLLAAGVST 188

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            + A +L  + KT+  H+  + +KLG  S   L   A     + 
Sbjct: 189 RETAARLTISPKTVETHRVRIYAKLGCKSAVELTRIAVRTGLIE 232


>UniRef50_Q1AST2 Two component transcriptional regulator, LuxR family n=2
           Tax=Rubrobacter xylanophilus DSM 9941 RepID=Q1AST2_RUBXD
          Length = 232

 Score =  217 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 81/218 (37%), Gaps = 17/218 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + +++   +   G   +  +           + +E+  +   R+    V+   +     
Sbjct: 12  RLIVVDDHDLIRAGFRLVLEQEPDFEVVGEASSGREA-IELCRRLRPDVVVMDLAMPG-- 68

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +GL     +  + P+   LV+   +    ++ +L      G + K+S L      L  
Sbjct: 69  -VDGLEATRRIKEEHPQVAVLVVTALEDPEYMLEALKAGAA-GYVLKSSPLPRVISALRR 126

Query: 130 SLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            L+G       L  +   +             +  L+  ERE+L  M+RG +  +IA +L
Sbjct: 127 LLSGESPLNQELAARLIQDLARRPGGGGNPPPAEELTAREREVLVLMARGRTNPEIAREL 186

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
             +  T ++H  N++ KLGVS     +  A  L  +  
Sbjct: 187 VISRGTAKSHVQNIIRKLGVSDRTQAVARAFELGLIEP 224


>UniRef50_A0RDP4 DNA-binding response regulator n=75 Tax=Bacillaceae
           RepID=A0RDP4_BACAH
          Length = 221

 Score =  217 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 71/211 (33%), Gaps = 12/211 (5%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L+E   +   G+    +             + E     +       V+   S   
Sbjct: 14  KIKLLLVEDHHIVRRGLVFFLKTREEFEIVGEA-ENGEDALTFVRTERPDVVLMDLSMP- 71

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
             + +G+    ++       + L+++    +  ++ +L     DG   K    E     +
Sbjct: 72  --KMDGIEATKQIKQYDETIKILILSSFSEQDYVLPALEAGA-DGYQLKEVQPEQLVASI 128

Query: 128 FLSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                G      ++             N    L+  E+E+L+ +++G S  +IA +L   
Sbjct: 129 IAIYEGNANFHPKVTPALLGRSAVKKENPFSMLTKREQEVLQEIAKGRSNKEIAAELHIT 188

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
            +T++ H  N+++KL V         A    
Sbjct: 189 EQTVKTHVSNILAKLEVDDRTQAALYAVKHG 219


>UniRef50_Q024Y7 Two component transcriptional regulator, LuxR family n=1
           Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q024Y7_SOLUE
          Length = 225

 Score =  217 bits (555), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 87/209 (41%), Gaps = 17/209 (8%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           + L++   +   G+  +  + +            ++      + S   V+          
Sbjct: 5   IVLVDDHKLVRDGVRMILERGSEFLVVGEAENGADA-VQLCKKSSPDIVLMDIGLPGM-- 61

Query: 71  REGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLS 130
             G+   TEL    P  + ++++  D E  ++ ++       VL KAS+ E+    L   
Sbjct: 62  -NGIEATTELLRHCPSVKVIILSMYDDENSVVSAIRSGARAFVLKKASSNELL-DALRTV 119

Query: 131 LNGVRQATDRLNNQWY------------INQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
             G    + +++++               +   +LSP E ++LR ++ G +   IA  L 
Sbjct: 120 ARGGSYLSSQVSDRLLQRIQRGDLETHDRSPLESLSPRELQVLRLVAEGKTSKDIAVLLD 179

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             ++T+R+++  +M KLGV++ AGL + A
Sbjct: 180 LGLQTVRSYRKTMMKKLGVNNVAGLTQLA 208


>UniRef50_Q1H354 Two component transcriptional regulator, LuxR family n=4
           Tax=Proteobacteria RepID=Q1H354_METFK
          Length = 213

 Score =  217 bits (554), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 12/213 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L++   +   G+  L  +  G         S E             ++   S    
Sbjct: 5   IRIMLVDDHEVVRSGLRRLLEQNDGVEVIAEA-DSGEQAYQFYGEHMPDVIVMDMSMPGM 63

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  L  +  ++P+ R ++ +  +  A    +L        ++K+   +   Q + 
Sbjct: 64  G---GLEALRRIIARYPQARVIIFSMHENAAFASQALGAGARA-YVAKSGAADDLVQAVR 119

Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G    +  +  Q          + +R LS  E E+ R ++ G  + +I+  LK + 
Sbjct: 120 EVAQGKGYLSPGIAQQIALQTLSGSDDPTRLLSAREFEVFRLLAAGKGVEEISTILKISQ 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           KT+  ++  +  KLG++S   L+  A     + 
Sbjct: 180 KTVANYQTLLKQKLGITSPIELVRLAIKHGVIE 212


>UniRef50_C0ZDE8 Two-component response regulator n=7 Tax=Bacillales
           RepID=C0ZDE8_BREBN
          Length = 214

 Score =  217 bits (554), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 87/209 (41%), Gaps = 12/209 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   M   G+  L   ++       ++T  ++   A +++    V+   S    
Sbjct: 2   IRVLLVDDHTMIRKGLRVLLESYSQIKIVGESHTGNDAILKA-NQLKPDVVLMDLSLPNG 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G +   E+    P  + +++   D E  +  +++     G + K S  E+  Q + 
Sbjct: 61  --LDGFTASKEIRKSNPLVKIVILTMHDEEIFVQEAITVGA-HGYILKNSHGELLFQAIV 117

Query: 129 LSLNGVRQATDRLNNQ--------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G       ++ +                L+  E+E++R +  GYS  ++A++L  +
Sbjct: 118 EVYRGKCFYKTSVSQEIINLWLRSDAKTLPSVLTLREKELVRLIVLGYSNKEMADKLLIS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +KT+  HK N+M KLG+ S   L++ A  
Sbjct: 178 VKTVENHKTNIMQKLGLDSKHQLIQYAIK 206


>UniRef50_A4VZN8 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=52 Tax=Bacilli
           RepID=A4VZN8_STRS2
          Length = 213

 Score =  217 bits (554), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 83/217 (38%), Gaps = 10/217 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    V L++   M  +G++S                 +E    A+  +    V+     
Sbjct: 1   MNTIRVMLVDDHEMVRLGLKSYLNLQPDVEVVAEASDGEEGLAKALE-VKPDVVVMDLVM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
               +  G+     L  ++P+ + +++       ++   L      G + K S+ +    
Sbjct: 60  P---KMTGVEATLALLKEWPQAQIVILTSYLDNEKIYPVLEAGA-RGYMLKTSSADEILA 115

Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +     G       +     +++ + +    L+  EREIL  +++GY   +IA++   +
Sbjct: 116 AIRKVALGEYAIETEVEKKVEHHKRHPDLHDDLTAREREILTLLAKGYDNQRIADESFIS 175

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           +KT++ H  N++SKL VS     +  A     +   +
Sbjct: 176 LKTVKTHVSNILSKLAVSDRTQAVVYAFQHGLVAQED 212


>UniRef50_B4VFW8 Two-component system response regulator n=2 Tax=Bacteria
           RepID=B4VFW8_9ACTO
          Length = 216

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 13/213 (6%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           +  V L++   +   G+ +                 +E    A   +    ++       
Sbjct: 7   RVRVLLVDDHQVVRRGLRTFLEVQEDIEVVGEASDGEEGIARA-EELRPDVILMDIKMPG 65

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
           +   +G+  L  L       R L++     +  ++ +L      G + K    +     +
Sbjct: 66  T---DGIEALRRLRELANPARVLIVTSFTEQRTVVPALRAGAA-GYVYKDIDPDALAGAI 121

Query: 128 FLSLNGVRQATDRLN--------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                G       +              ++   L+  ERE+L  ++ G S  +IA  L  
Sbjct: 122 RSVHAGHVLLQPEVAVALLTQDDQGPSSSRGGALTDREREVLSHIADGRSNREIARALVL 181

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           + KT++ H  N++ KL V+        A     
Sbjct: 182 SEKTVKTHVSNILMKLDVADRTQAALWAVRHGI 214


>UniRef50_Q98DH9 Two-component system response regulator n=1 Tax=Mesorhizobium loti
           RepID=Q98DH9_RHILO
          Length = 215

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 13/217 (5%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  + + +   +   GI ++  + A   +      + E+        +   VI  +S  
Sbjct: 4   PRIKIVIADDHPIVRSGIRAVLEQRAEW-WVCGEADNGETAVRLAREHAAKIVILDYSLP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL     +    P T  L+    + E+ +  +L      G L K          
Sbjct: 63  ---VLNGLEATRIIRRTMPETEVLIYTMHEDESLIRETLRAGA-RGYLLKIEDDSELVAA 118

Query: 127 LFLSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           +   + G    + R++     +         SR L+  ERE++RF+S G S  +IA +L 
Sbjct: 119 VAALIRGQTYFSPRVSECVLQDFLDGQSDVTSRNLTNREREVVRFVSEGESNKRIAARLG 178

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            ++KT+ +H+   M KLG+ +   L+  A        
Sbjct: 179 VSVKTVDSHRTTAMRKLGLRNAVDLVRYAIRNKLTLP 215


>UniRef50_B0C756 Two-component transcriptional regulator, LuxR family n=1
           Tax=Acaryochloris marina MBIC11017 RepID=B0C756_ACAM1
          Length = 224

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 87/215 (40%), Gaps = 15/215 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            +      V L++   +   G++++ +            + + +   A   +    ++  
Sbjct: 2   MTPQNPIRVLLVDDEDIVRYGLKAIAQGTPEIEIVGEAGSGKAAIAQA-KTLQPDVILMD 60

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            +  +    +G++   E++   P  + L++   D    L+ ++    + G L K +  E 
Sbjct: 61  INMPQM---DGVTATQEISRIQPHAKVLILTTHDEAEYLVEAMQQGAV-GYLLKNTPPED 116

Query: 123 FHQELFLSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQ 172
           F Q +  +  G  Q    L            +  I     ++P E+++L+ ++ G S  +
Sbjct: 117 FIQSIQQAHKGYLQLGPGLGQKLCQLLKTPVRPQIEAFEGITPREQDVLKLVATGASNRE 176

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           I+E L    KT++ H  +++S++GV S   L   A
Sbjct: 177 ISETLHITEKTVKNHVSSILSRVGVQSRTQLAIWA 211


>UniRef50_B4D2X8 Two component transcriptional regulator, LuxR family n=2
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D2X8_9BACT
          Length = 242

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 16/220 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
             +R V L++       G+ ++  +           T+  +  +AM R++    +   S 
Sbjct: 20  PAQRRVLLVDDHPAIRRGMAAIIDEEPDLTTCGEASTAPMAL-EAMRRLNPDIAVIDISM 78

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
             +    G+  +  +  + P  + L+++  D     + +L      G + K   LE    
Sbjct: 79  PGT---NGVELIKLMLAEQPGLQILMLSMHDESVYALRALRAGA-KGYVMKGEALECVLT 134

Query: 126 ELFLSLNGVRQATDRLNNQWY-----------INQSRTLSPTEREILRFMSRGYSMTQIA 174
            L     G    + + +++              +    LS  E E+LR + RG+   +IA
Sbjct: 135 GLRKVGEGEIYVSPKFSDRLIFKTIQSTIAGVASPVDKLSDREFEVLRLLGRGFGSREIA 194

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           E+L  ++KT+  H+ ++  KLG      ++  A   +   
Sbjct: 195 EELSLSVKTVETHRAHIKEKLGFKEAGEMVRFAIDWVAQE 234


>UniRef50_A7HA46 Two component transcriptional regulator, LuxR family n=1
           Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HA46_ANADF
          Length = 212

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 76/217 (35%), Gaps = 18/217 (8%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71
            + +   +   G+ +L     G          +E+ + A   +    V+   +       
Sbjct: 1   MVADDHEVVRRGVRALVESHPGWTVCGEASNGREAVRLA-QELRPDVVVLDVTMPE---L 56

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
            GL    E+    P T  +++   D +  L  +L      G + K          +    
Sbjct: 57  NGLEATREIRASVPDTEIILLTVHDSDQLLGQALDAGA-RGYVLKEDAARHLVDAIDALS 115

Query: 132 NGVRQATDRLNNQWYINQSR-------------TLSPTEREILRFMSRGYSMTQIAEQLK 178
                   R   +     ++             +L+  ERE+LR +++G S  ++A QL 
Sbjct: 116 KHAPYVPSRAAERPGNAAAQERNTVVSRGGRVTSLTQREREVLRLLAQGDSNREVAGQLS 175

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            + KT+  H+ NVM KLG SS   L+  A     +  
Sbjct: 176 ISAKTVETHRANVMRKLGASSIVDLVHYAIRNGIVEP 212


>UniRef50_B9QSJ5 Response regulator receiver domain protein n=1 Tax=Labrenzia
           alexandrii DFL-11 RepID=B9QSJ5_9RHOB
          Length = 212

 Score =  217 bits (553), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 12/215 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
            K   V L +   +   GI +   K             +E+       +    ++   S 
Sbjct: 2   TKPIRVLLADDHALVRDGIRARLNKVPEIEVVGEATNGREA-VKLAHELRPDVLLMDVSM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL    E+   FP    L+++  D    + G +       +L   S  E    
Sbjct: 61  P---VMNGLEAAAEVRKSFPEIAVLILSIYDNSEYVRGVVQAGARGYILKDISAPE-MIT 116

Query: 126 ELFLSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            +    +G    +  +            I     L+  ER++L  +++G    ++A+ L 
Sbjct: 117 AISSVASGGYYFSSAVGPTLVGTATSAPIEDPYGLTDRERQVLTAIAKGLPNKEVAKSLG 176

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            +++T+ +H+ N+  K+G  + A L + A  L  +
Sbjct: 177 ISVRTVESHRLNLREKVGNKNAAQLYKVAQDLGLL 211


>UniRef50_A9WKI8 Response regulator receiver n=3 Tax=Chloroflexaceae
           RepID=A9WKI8_CHLAA
          Length = 209

 Score =  216 bits (552), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 83/213 (38%), Gaps = 8/213 (3%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    VAL++   +   G+ +                + ES     S      ++     
Sbjct: 1   MSPIRVALVDDHSIVRRGLSAYLAAQPDIVVVGEAA-NGESALQMASTWQADVIVMDVLM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+    +L    P T  ++++    +AR+IG+L    +   + K S  E   +
Sbjct: 60  PGG--IDGIETTRQLKRLIPHTHIIILSGYADDARVIGALRAGAIT-YIEKESQPEQLLE 116

Query: 126 ELFLSLNGVRQATDRLNNQWYINQ----SRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            +  ++ G       L  +    Q    + TL+  ERE+L+ ++ G +  +IA +L  + 
Sbjct: 117 AIRGAMAGKAVLAPALMQRILEAQTSKAADTLTEREREVLKLVAEGLTNAEIASRLTVSE 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +T++ H  +++ KLG++        A     + 
Sbjct: 177 ETVKTHVASILRKLGLAHRTQAAIYALRHGLVS 209


>UniRef50_A0L9F1 Two component transcriptional regulator, LuxR family n=1
           Tax=Magnetococcus sp. MC-1 RepID=A0L9F1_MAGSM
          Length = 206

 Score =  216 bits (552), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 74/210 (35%), Gaps = 10/210 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G+  L                 ++    +  ++    +   S    
Sbjct: 2   IRIIMADDHTIFRQGLAHLLSAHQELEIVGEAGRGDDAL-QLIRDLNPDVALLDISMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  +  +   TR L++   D     I +     L  V+   +        + 
Sbjct: 60  --LNGLDVVKRVVEEKRPTRLLLLTMHDDPTLAIKAEQAGALGYVVKDNA-FSELLDAIL 116

Query: 129 LSLNGVRQATDRLNNQ-----WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               G R  ++ +  +        +    LSP E+E++R ++ G +  +IA  L  + KT
Sbjct: 117 AVAAGKRFVSEVVAEKVNELERLDDLPVQLSPREKEVVRLVADGQTNKEIARSLGISPKT 176

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +  H+  +M KL + + A ++  A  +  +
Sbjct: 177 VDTHRTRLMRKLNLHTTADVVRYAMRMGLV 206


>UniRef50_C4ZNU7 Two component transcriptional regulator, LuxR family n=1
           Tax=Thauera sp. MZ1T RepID=C4ZNU7_THASP
          Length = 220

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 14/210 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   M    + +L  +           +  E             V    +    
Sbjct: 3   LRILLADDHQMFRHALRALLARDPELEVVAEAASG-EEVLAIADAQPVDLVCMDIAMPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+     L  + P  R + ++       +   L  +   G ++K    +   + + 
Sbjct: 62  ---DGIEATRRLLARHPALRVIGLSAFADRQFVTD-LLAAGARGYITKGEAGDELLRAIR 117

Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
               G       +                 +  L+  ER++L+ ++ G +  QI ++L  
Sbjct: 118 TVCEGRSYLCPEVAATVADALRDSPGVYAAAPRLTARERQVLQLIAEGLTSVQIGDRLHI 177

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
              T+  H+ N+M KL + + A L   A  
Sbjct: 178 AASTVEVHRRNLMRKLDLHNVAELTRYAIH 207


>UniRef50_D1C9Z8 Two component transcriptional regulator, LuxR family n=4
           Tax=Bacteria RepID=D1C9Z8_SPHTD
          Length = 212

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 14/216 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + +++   +   G+ ++                 ++ Q     +    V+   +   +
Sbjct: 2   IRILVVDDHPVVREGLVAILEAQEDLTVVGEAGDGDQAVQQY-RDLKPDVVLMDLAMPGT 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+  + E+    P  R +V+   D + R++ ++      G L K +  E   + + 
Sbjct: 61  ---DGVQAIQEIKRIDPNARVVVLTAYDTDERILQAVQAGA-SGYLLKGAPREDIFRAVR 116

Query: 129 LSLNGVRQATDRLNNQWYINQ---------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +   G       +  +                 L+  E ++L  M+RG    +IA +L  
Sbjct: 117 VVYRGGSLLEPVVAGKLLNRMGDLLRGEPVEEELTARELDVLTLMARGLRNKEIAYELSI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
             +T++ H   +  KL VS     +  A     +R 
Sbjct: 177 TERTVKFHANAIYRKLDVSGRTEAVSKAIQRGLVRP 212


>UniRef50_Q47DK2 Two component transcriptional regulator, LuxR family n=1
           Tax=Dechloromonas aromatica RCB RepID=Q47DK2_DECAR
          Length = 211

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 86/211 (40%), Gaps = 12/211 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  + L +  ++   GI ++     G   +       E+   A+ R+    V+   + 
Sbjct: 1   MKKTRIILADDQLLIRAGIRAIVETLPGFQIEAECTDGYEA-ISAIQRLQPDVVLLDIAM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+     +    P T+ LV++  D    +  +L  + ++G L K   L    Q
Sbjct: 60  PG---PSGIEVARTIRQFDPNTKILVLSSVDRPEIIEQAL-AAGVNGYLLKDFVLAELLQ 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLK 178
            L + L+G R  + ++      + +         L+  + EILR ++ G +  +IA  L 
Sbjct: 116 ALEMVLHGERFLSPKIREMSRFSDAEGTSGSGTQLTARQTEILRLVASGRTTKEIARDLG 175

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            + KT+  H+  +M ++GV    GL   A  
Sbjct: 176 ISPKTVEFHRSRLMERIGVHDVTGLTRFALQ 206


>UniRef50_Q5NY27 DNA-binding response regulator, LuxR family n=1 Tax=Aromatoleum
           aromaticum EbN1 RepID=Q5NY27_AZOSE
          Length = 215

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   M    + ++  K  G        ++ +   D +S                
Sbjct: 3   IRIVLADDHQMFRHALRAMLEKEPGIRIVGEA-SNGDELIDLISHQPVDIACVDIGMPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+     L    P  R + ++       ++  L+     G ++KA   E   + + 
Sbjct: 62  ---NGIEATRRLLAIRPHVRVIGLSAFSDRQFVLDLLNAGAT-GYVTKAEAGEELLRAIH 117

Query: 129 LSLNGVRQATDRLN---------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                       +          N      +  ++  ER++L+ ++ GY+ T+IA++L  
Sbjct: 118 TVQQSKTYLCPDVAATVTNALLDNAPKDISAPRITARERQVLQLIAEGYTSTRIADRLHL 177

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
              T+  H+ N+M KL + S A L + A  
Sbjct: 178 APSTVEVHRRNIMRKLDLHSVAELTKYAIR 207


>UniRef50_C6E2Z1 Two component transcriptional regulator, LuxR family n=2
           Tax=Geobacter RepID=C6E2Z1_GEOSM
          Length = 216

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 16/217 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +   GI  L  +F           +     +  + ++   V+   +    
Sbjct: 2   IKVMVVDDHSIVREGIRILLERFPDLSVVAEA-DNGRKASELAADLAPHVVLMDMTMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+     L    P  R L+++    +  +  +       G L K        Q + 
Sbjct: 60  --LNGIDATQRLLAACPEVRVLILSMHKDKRFVSQAFRAGA-RGYLLKDCASAELVQAVR 116

Query: 129 LSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
               G       +             +        L+P ERE+L+ ++ G +    A QL
Sbjct: 117 QVACGEMYVCHGIIGVVVHDYVTRLPESLTQPEVPLTPREREVLQLIAEGNNAKNAAYQL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             N+KT+  H+  +M KL + S A L + A     + 
Sbjct: 177 NINVKTVDTHRQQIMKKLKMRSVAELTKYAIREGLIS 213


>UniRef50_UPI0001C314AF two component transcriptional regulator, LuxR family n=2
           Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C314AF
          Length = 228

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 10/212 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  V + +   +   G+  +                  + + A+       ++   +  
Sbjct: 12  AQIRVVIADDHRVVRSGLRMVLDAEPDIAVVAEAGDVPSA-ERAVRAHHPHVLVLDLNMP 70

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
             +    L  +  L  + P T  +V+      A    +L      G + K +  +   Q 
Sbjct: 71  GEQS---LPAIPRLVAELPETAVVVLTMQQDPAFAREALRSGA-RGYVLKEAADDELVQA 126

Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           + L+  G       L  +       +     L+  E E+LR ++ G++  +IA+QL  +I
Sbjct: 127 VRLAREGRTYLNPELGARMAAEPPPSGPPDDLTARELEVLRLIALGHTNAEIAQQLFLSI 186

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +T+ +H+ ++  K+  SS A L+  A     M
Sbjct: 187 RTVESHRAHIQQKVRRSSRAELVRYALDHGLM 218


>UniRef50_D0LYS4 Two component transcriptional regulator, LuxR family n=1
           Tax=Haliangium ochraceum DSM 14365 RepID=D0LYS4_HALO1
          Length = 212

 Score =  216 bits (551), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 86/216 (39%), Gaps = 14/216 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             +A+ +   +   G+  +  +              E+  + +   +   ++   +    
Sbjct: 2   IKIAIADDHALLREGMRRMLSQSELIEVVGEASNGAEA-VEVVKEKAPDVLLLDITMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
             ++G+    ++      T+ L+++    E   + +L     +G +SK + LE   + + 
Sbjct: 59  -VKDGIEATADILALNVNTKILILSMHADEQYALRTLRAGA-NGFISKGARLEELLKAIT 116

Query: 129 LSLNGVRQATDRLNNQWYINQ---------SRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
               G R   D++   +               TLS  E +++  +++G +  +IA  L+ 
Sbjct: 117 DVHEGQRYLPDKIATSFAERHIRPDAEKPLVETLSKREFQVMTHLAQGMTNREIAGVLQI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           ++KT+  H+ +V+ KL + +++ +   A     ++ 
Sbjct: 177 SVKTVDTHRSHVLKKLELRNNSDITRFAIQHGYIQF 212


>UniRef50_O32197 Transcriptional regulatory protein liaR n=142 Tax=Firmicutes
           RepID=LIAR_BACSU
          Length = 211

 Score =  215 bits (550), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 14/210 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V LI+   M  +G+ +                  E  + A+  +S   ++        
Sbjct: 2   IRVLLIDDHEMVRMGLAAFLEAQPDIEVIGEASDGSEGVRLAVE-LSPDVILMDLVMEGM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+    ++  +    + +V+     + ++   +    L   L K S        + 
Sbjct: 61  ---DGIEATKQICRELSDPKIIVLTSFIDDDKVYPVIEAGALS-YLLKTSKAAEIADAIR 116

Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
            +  G  +   ++  +                +L+  E EIL  ++ G +  +I E+L  
Sbjct: 117 AASKGEPKLESKVAGKVLSRLRHSGENALPHESLTKRELEILCLIAEGKTNKEIGEELFI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            IKT++ H  N++SKL VS        A  
Sbjct: 177 TIKTVKTHITNILSKLDVSDRTQAAVYAHR 206


>UniRef50_C7MUJ2 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=101 Tax=Bacteria
           RepID=C7MUJ2_SACVD
          Length = 239

 Score =  215 bits (550), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 21/229 (9%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           + +  +   V L +   +   G   +     G           E+ + A +R     V+ 
Sbjct: 14  KDTGDRPLRVVLADDQDLVRAGFRVILSSDDGIEVVGEAGDGWEAVEVA-TRERADVVLM 72

Query: 62  SFSAMRSERREGLSCLTELA----IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKA 117
                   + +GL     L        P T+ +++   D E  L  +L      G L K 
Sbjct: 73  DVQMP---KLDGLEATRRLLGPAGADHP-TKVIILTTFDREDYLFEALRAGA-SGFLLKN 127

Query: 118 STLEIFHQELFLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSR 166
           ++ E   + + +   G    +  +  +               +   L+  E E+L  +++
Sbjct: 128 ASPEDLIESVRIVARGDALLSPEVTRRVIARFSAPAVTGPTRRPSELTDREFEVLSLLAK 187

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           G S  +IA QL     T++ H   +++KL +      +  A     +  
Sbjct: 188 GASNAEIARQLVLGETTVKTHVSRILTKLNLRDRTHAVVFAYENGIVTP 236


>UniRef50_P54662 Transcriptional regulatory protein degU n=24 Tax=Bacillales
           RepID=DEGU_BREBE
          Length = 236

 Score =  215 bits (550), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 78/227 (34%), Gaps = 29/227 (12%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           E     K  + +I+   +   G++ +                 E+  + + + +   ++ 
Sbjct: 3   EQVNENKIQIVIIDDHQLFREGVKRILAMEPEFEVVAD-GEDGENAVELVEKYNPDVILM 61

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
             +     +  G+    +L  ++P  + LV++  D E+ +   L      G L K    +
Sbjct: 62  DINMP---KVNGVEATRDLIQRYPDVKVLVLSIHDDESYVTHVLKTGA-SGYLLKEMDAD 117

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYIN------------------------QSRTLSPTE 157
              + + +   G      ++ +                                 L+  E
Sbjct: 118 ALIEAVKVVAQGGAYIHPKVTHNLIKEYRRLVNEDEQESSEIGFKEVEYRKPLHILTRRE 177

Query: 158 REILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
            E+L+ M+ GYS   I E L  + KT++ H  N++ K+ V+     +
Sbjct: 178 CEVLQLMTDGYSNRMIGEALYISEKTVKNHVSNILQKMNVNDRTQAV 224


>UniRef50_Q1AVR6 Two component transcriptional regulator, LuxR family n=17
           Tax=Bacteria RepID=Q1AVR6_RUBXD
          Length = 220

 Score =  215 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 66/220 (30%), Gaps = 18/220 (8%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V ++E   +   G+ +L     G           E+ +          V+      R  
Sbjct: 6   RVMIVEDQALMREGLRTLLDLEEGVEVVGEAADGVEALERLPGA-RPEVVLVDVRMPRM- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+  +  L  + P    +++   D +  +   L      G + K +  E     +  
Sbjct: 64  --DGIQLIERLGREHPEVAAIILTTFDDDEYVFRGLRAGA-RGYILKDTPSEELAAAIEK 120

Query: 130 SLNGVRQATDRLN-------------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
              G       +                     S  LS  E E+LR ++ G S  +IA  
Sbjct: 121 VHRGEAVLDGPITLKVISELGRLSKGPAGPQPGSGGLSEREMEVLRLVASGASNREIARA 180

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           L     T++ H  +++ KLG          A     +   
Sbjct: 181 LYITEGTVKNHISSILRKLGFRDRTQAALYALERGWIEAP 220


>UniRef50_C8WSR5 Two component transcriptional regulator, LuxR family n=1
           Tax=Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446 RepID=C8WSR5_ALIAD
          Length = 231

 Score =  215 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 18/219 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +   G+ ++ R   G          +E+  +    +     +        
Sbjct: 10  IKVLVVDDHELFRRGVVTVLRSTPGIYVVGEAGNGREA-IECFQTLQPDVTLLDIHMP-- 66

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL    ++    P T+ L++   + E  L  ++      G + K+ + E   + + 
Sbjct: 67  -VCNGLETARKMREANPNTKILMLTVSETEEMLFEAVKSGA-SGYVLKSVSPERLIECVR 124

Query: 129 LSLNGVRQATDRLNNQ-------------WYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               G       L  +                     L+  ERE+L+++S G S  +IA 
Sbjct: 125 QVYEGEPVVPSSLAMKMIAEFSRTAETRMPSSESVTELTEREREVLQYLSAGASNKEIAR 184

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            L  +  T+R H  +++ KL +S+ A     A      R
Sbjct: 185 ALFISENTVRNHVRHILDKLHLSNRAQAAAYAVRNGIAR 223


>UniRef50_Q13QW9 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderia RepID=Q13QW9_BURXL
          Length = 220

 Score =  215 bits (549), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 81/212 (38%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            +V L++   +   G   L    A          + +++Q   + +    V+   S    
Sbjct: 6   ISVLLVDDHAVVREGYRRLLELNADVHVCGEAADAAQAYQRFCA-LRPDVVVMDVSLPG- 63

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  +  +  + P  R L+ +  +    +  +L    L G ++KAS  ++  + + 
Sbjct: 64  --ASGIEAMRRMLAREPDARVLIFSVHEEAIFVRRALDAGAL-GYVTKASAPDVLVEAVR 120

Query: 129 LSLNGVRQATDRLNNQWYIN-------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
                    +  ++    +          R LS  E E+LR + +GY++  IAE+L  + 
Sbjct: 121 TIARRAGYLSPDISQALALRNAFSEGPPGRQLSAREFEVLRLLVQGYTLPSIAEKLGLSQ 180

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           KT+  H+  +  K G  +   L + A  L   
Sbjct: 181 KTVANHQSVIRQKFGADNGVQLAQMASRLGLQ 212


>UniRef50_Q04VJ6 Receiver component of a two-component response regulator n=4
           Tax=Leptospira RepID=Q04VJ6_LEPBJ
          Length = 221

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 23/226 (10%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           +     + L++   +   G++ +                 E   D + +++   VI   S
Sbjct: 2   KPTNTKIFLVDDHAILREGLKMILSGQ---FEICGESGDAEKALDQIGKLNPDLVITDIS 58

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   G+  +  L  ++P  R ++++  D    +   L    ++G + K        
Sbjct: 59  MPG---LSGIDLVKNLRKQYPNIRTIILSRHDNREYV-QKLLELGINGYVLKDDAGNDLL 114

Query: 125 QELFLSLNGVRQATDRLN----------------NQWYINQSRTLSPTEREILRFMSRGY 168
           + +     G    +  +                 NQ        LS  EREIL+ ++ G 
Sbjct: 115 RAIEAVHKGETYLSPGITAHFLSGFVGSGKPGEENQDAKKAFSVLSDREREILKLVAEGN 174

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           S   I + L  +  T++ H+ N+M KL +   A L+  A     + 
Sbjct: 175 SNESIGKILGISPATVKVHRANIMKKLNLHKVADLVMYAIRAGLIE 220


>UniRef50_C0QFI8 DNA-binding response regulator (LuxR-family protein) n=1
           Tax=Desulfobacterium autotrophicum HRM2
           RepID=C0QFI8_DESAH
          Length = 220

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 17/216 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + + +   +   G+  L  +  G          +++   A+ +     VI   +     
Sbjct: 4   RILIADDHAIVREGLRVLLER-KGLEVPWMAENGRQAVCLAV-KFKPDIVIMDITMPNM- 60

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G     ++    PRTR + ++       +    +   +  VL K S        +  
Sbjct: 61  --NGSIATEKIMQALPRTRVIALSMHADRRYIDRMFNAGAIAYVL-KDSAFAELFDAIQA 117

Query: 130 SLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
              G    +  +      +               +SP ERE+L+ ++ G    QIAE+L 
Sbjct: 118 VGRGKYYISPSIAKTLADSCTSAPDTPQKCPFGRISPREREVLQLIAEGVKTRQIAERLF 177

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            +IKT+ AH+ N+M+KL +SS AGL   A     + 
Sbjct: 178 VSIKTVEAHRRNIMNKLMISSVAGLTRFAIQEGLVS 213


>UniRef50_B6A2W0 Two component transcriptional regulator, LuxR family n=47
           Tax=Proteobacteria RepID=B6A2W0_RHILW
          Length = 223

 Score =  215 bits (548), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 82/210 (39%), Gaps = 9/210 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  V LI+   +   G++++   F        T    ++  D   +I    V+   +  
Sbjct: 5   PKIRVLLIDNHPLVLDGLKAVLETFDHIE-VAGTAGLAQTGLDIARQIQPQVVLMDINMP 63

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
              +  G+  +     +FP  R ++++  D    +  S+      G + K  + +     
Sbjct: 64  ---KLSGIDAIELFRNEFPEIRVVMLSMHDSREYISSSVMHGAA-GYVLKDVSTDEIVAA 119

Query: 127 LFLSLNGVRQAT----DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
           +    +G    +    D L  +     S  L+P E +IL  +  G S  +IAE L  +  
Sbjct: 120 IETVADGGTYFSSGVFDALMGERAEEGSDPLTPREHDILGLIVAGRSNREIAEVLGISSA 179

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           T   H+ N+  KLG+++ AGL+  A     
Sbjct: 180 TAETHRKNLKKKLGIATTAGLIRYALDHGI 209


>UniRef50_C6CZA5 Two component transcriptional regulator, LuxR family n=4
           Tax=Firmicutes RepID=C6CZA5_PAESJ
          Length = 221

 Score =  214 bits (547), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 80/214 (37%), Gaps = 13/214 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVIFS 62
                V +++   M   G+ +               + Q +     + +       ++  
Sbjct: 4   TNTLKVMIVDDHDMVRTGLRTYLMLEPKFEVVAEAGSGQAAISMLEAGLPSGLPDVILMD 63

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
                    +G+    +L +++P  + +++     + ++ G++    +  VL   S  E+
Sbjct: 64  LMMPGM---DGIETTRQLIVEYPNLKIIMLTSFLEDDKVYGAIEAGAVSYVLKTVSAEEL 120

Query: 123 ---FHQELF----LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               H  +     ++ +  +  T  L  +   +    L+  E+E+L  ++ G S  +I E
Sbjct: 121 IYALHGAVKGMPVMTADVSQALTRGLRQRTAQSGDEELTEREKEVLLLIAEGRSNKEIGE 180

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +L  ++KT++ H  N++ K  +     L   A  
Sbjct: 181 ELHISVKTVKTHVSNLLMKCELEDRTQLAVLAHR 214


>UniRef50_UPI0001746AEC response regulator with a HTH DNA-binding domain n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI0001746AEC
          Length = 222

 Score =  214 bits (547), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 80/218 (36%), Gaps = 16/218 (7%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
            + K  V L++   M   G   +              ++ E+    + ++    V+   +
Sbjct: 6   PVSKARVLLVDDHRMVLEGYRFMLNAQPDLEVCATAVSAAEAL-GLLEQVRPDLVVTDLT 64

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                 R GL  + ++   FP T+ LV +  D       +L      G + K +    F 
Sbjct: 65  L---GGRSGLDLIKDVMALFPETKILVCSMHDEMLWANRTLQAGA-RGYVMKDADGPTFL 120

Query: 125 QELFLSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQI 173
             +   L G R  + RL             +   +    LS  E E+ R    G +  +I
Sbjct: 121 TAVRTVLAGQRYMSSRLAASVLESFGQSKPRGSSSPIEKLSDREFEVFRLFGEGKTAKEI 180

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           A QL  + KT+  H+ ++  KLG S+ A ++  A   +
Sbjct: 181 AAQLNLSPKTVSVHRDHIKEKLGFSTSAEMIRQAVRHV 218


>UniRef50_C6MDL5 Two component transcriptional regulator, LuxR family n=1
           Tax=Nitrosomonas sp. AL212 RepID=C6MDL5_9PROT
          Length = 218

 Score =  214 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 78/220 (35%), Gaps = 14/220 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
             K  V L++   M   G+  +    +            E+        S   V+   + 
Sbjct: 3   TNKIKVMLVDDHAMLRHGMAMMINMESDMEVIAEAGDGNEALAILKKNESVDIVLLDVTL 62

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
              +   G   +  +    P    L ++  D       +L      G + K    EI   
Sbjct: 63  ---KTVSGFEVIKSMHALIPTLPVLFVSMHDESVYAERALRAGA-RGYVMKQEPGEILLA 118

Query: 126 ELFLSLNGVRQATDRLNNQW----------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175
            +   L G    + +++ +                 TL+P+E E+L  + +G+S  +IA+
Sbjct: 119 AIHEVLKGNVYLSKQMHEKLLKRIASGHSEPEQLINTLTPSEFEVLHLIGQGHSSQEIAK 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            L R+IKTI  H+FN+  KL +   A L+  A   +    
Sbjct: 179 LLCRSIKTIETHRFNIRVKLHLKDGADLIRYATRWISEEP 218


>UniRef50_A1SKW0 Two component transcriptional regulator, LuxR family n=1
           Tax=Nocardioides sp. JS614 RepID=A1SKW0_NOCSJ
          Length = 215

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 75/207 (36%), Gaps = 8/207 (3%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           +  +  V +++   +   G   +  ++          +  E     ++R+    V+    
Sbjct: 2   KAARIAVLVVDDHTLHRDGTRRILEQYDDVDVVGDAASG-EDALAMVNRLHPRVVLMDIR 60

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   G+     +  + P TR L++   D E  + G+       G LSK +      
Sbjct: 61  LPGM---NGIEATRRIRERHPDTRVLIVTAYDDEEYVRGAFDVGAA-GYLSKTAPGRELV 116

Query: 125 QELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           + +     G       L         + + TL+  ER +LR ++ G    QIA +L  + 
Sbjct: 117 EAVRAVAGGNSVLQPTLMAALLAKRSSPANTLTDRERAVLRLLAEGMHNKQIASRLGISA 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAAD 208
           +T+  H   +  KLGV+S    +  A 
Sbjct: 177 RTVERHCDRIYGKLGVTSRTEAVVRAI 203


>UniRef50_A7NIZ3 Two component transcriptional regulator, LuxR family n=2
           Tax=Roseiflexus RepID=A7NIZ3_ROSCS
          Length = 230

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 78/222 (35%), Gaps = 16/222 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           S      V +++   ++  G+ ++     G         +  +  D ++R     V+   
Sbjct: 9   SSSPSTRVLIVDDHELARAGLAAVLACEPGIEVVGEA-DNGAAALDFVARHPVDLVMMDL 67

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
                   +G+     +    P    +++        L+ +L    + G L K ++    
Sbjct: 68  QMP---VIDGIEATRRIKALHPAIGIIMVTVQAKPDALMEALRAG-VAGYLLKDASRREI 123

Query: 124 HQELFLSLNGVRQATDRL-----------NNQWYINQSRTLSPTEREILRFMSRGYSMTQ 172
              +   L G       L                      L+P E+++LR + +G +  +
Sbjct: 124 IGAVRQVLRGEAFLNPDLVLQTLRRLAHATPTDDATPIEPLTPREQQVLRLLMQGKTNRE 183

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           IA +L  +  T++ H  ++++KLGVS        A  L  +R
Sbjct: 184 IARELIISPGTVKVHVEHIIAKLGVSDRTQAAVRALELGLVR 225


>UniRef50_B9PAD6 Predicted protein n=33 Tax=cellular organisms RepID=B9PAD6_POPTR
          Length = 326

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 78/216 (36%), Gaps = 10/216 (4%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS---FAAVI 60
           +      V LI+   +   G+        G          + +     +  +      VI
Sbjct: 110 TTSSAARVLLIDDHALVRDGMRMHLTLQPGLEVVGEADDGEAALAWLAAAEAGRMPDLVI 169

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                       G++    L  ++P    L+++  D    +  ++      G + K +  
Sbjct: 170 TDIGMRGMG---GIALAGALHDRYPELAVLIVSMHDNLEYVRQAIRAGA-RGYVLKDAPA 225

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYI---NQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
           +     +   L G    + R+         +    L+P ER+IL  + RG +   IA QL
Sbjct: 226 DELLAAIQAVLAGRVFYSARIARGMAAQAVSPLDALTPRERDILHGIGRGQANKDIAVQL 285

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
             +++T+  H+ N+  KLG+   A L++ A   L +
Sbjct: 286 GVSVRTVETHRLNLKRKLGIEGRAELVKYAVQQLGL 321


>UniRef50_Q2YB36 Two component transcriptional regulator, LuxR family n=3
           Tax=Betaproteobacteria RepID=Q2YB36_NITMU
          Length = 217

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 14/214 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  V L++   M   G+  L                 E+     +      V+   S  
Sbjct: 4   SKAQVMLVDDHAMLRHGMAMLINLEPDMEVFAEAGDGDEALATLKAGHHADIVLMDVSL- 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
             +   G   +  +    P    LV++  D       +L      G + K    E+    
Sbjct: 63  --KTLSGFEVIKSIHTLLPALPVLVVSMHDEGVYAERALRAGA-RGYVMKQEPGEVLVTA 119

Query: 127 LFLSLNGVRQATDRLNNQWYINQS----------RTLSPTEREILRFMSRGYSMTQIAEQ 176
           +   L G    +  ++ +     +           +L+P+E E+L  +  G+S  +IA+ 
Sbjct: 120 IHEVLKGNIYLSKPMHAKLLNRVAGGNSEPEPLINSLTPSEFEVLHLIGSGHSSQEIAKL 179

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           L R+IKTI  H+FN+ +KL +   A L+  A   
Sbjct: 180 LSRSIKTIETHRFNIRTKLNLKDGADLIRYATHW 213


>UniRef50_C4XNR8 NarL family two-component response regulator n=1 Tax=Desulfovibrio
           magneticus RS-1 RepID=C4XNR8_DESMR
          Length = 220

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 82/221 (37%), Gaps = 18/221 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    + L +   +   G+  L                 E+    + R+    ++   S 
Sbjct: 1   MATTRIILADDHTVLRTGLRLLIDNQPDFTVVGEAADG-EALLALVERVPAEVLVLDLSM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
            R     GL C+ EL  +    + LV+        +  +++   L G + K +       
Sbjct: 60  PR---VSGLECIKELKSRGQEIKILVLTMHG-REYVKEAMAAGAL-GYIEKQALDSELFV 114

Query: 126 ELFLSLNGVRQATDR------------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQI 173
            +    +G R  +                     +    L+  ERE+L+ + RG+++TQI
Sbjct: 115 AIRTVASGRRYMSPDNAEVLLDQLLSPTPQAASPDPYAVLTAREREVLKLLVRGHTLTQI 174

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           A  L  ++KTI  HK +VM KL ++  + L++ A     + 
Sbjct: 175 AGLLHLSVKTIDTHKTHVMEKLNLTHKSQLVDYALRHGLLA 215


>UniRef50_Q47FR0 Two component transcriptional regulator, LuxR family n=9
           Tax=Betaproteobacteria RepID=Q47FR0_DECAR
          Length = 218

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 83/218 (38%), Gaps = 14/218 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
               + +   +  IG++ +                 E+  + + + +F A++   +    
Sbjct: 2   IRTLIADDHDILRIGLKHILSDTGDIVVTAEASNGIEALVE-LRKGTFDALVLDLTMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
             R G+  + ++  +FP+   L+++    +   + SL      G L K S   +    + 
Sbjct: 60  --RNGIELIKQIKGEFPKLPILILSMHKEDIYAVRSLKAGA-SGYLCKDSAETLLADAIR 116

Query: 129 LSLNGVRQATDR---------LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
              +G                L+ +        L+  E +I   + +G  +T+I  QL  
Sbjct: 117 KVADGGLFINQAVAEKLTLQILHGRDTDAPHTGLTDREHQIFLMILQGLGVTEIGRQLNL 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           ++KT+  HK ++++K+ + + A L+  A     +   +
Sbjct: 177 SVKTVSTHKASILAKMNLRNSAELVRYAIQHRLIDEND 214


>UniRef50_B4CWX5 Two component transcriptional regulator, LuxR family n=3
           Tax=Verrucomicrobia RepID=B4CWX5_9BACT
          Length = 210

 Score =  214 bits (546), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 78/214 (36%), Gaps = 6/214 (2%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
             ++K   + +++   +   G+ +                + E+      +     V+  
Sbjct: 1   MPKLKPIRILVVDDHHVVRSGLAASLGLEDDLNVVGEAGNAGEAVTQF-RKHHPDVVLMD 59

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
                     G +   +L  ++P  R L+    D E  +  ++      G L K++  E 
Sbjct: 60  LRLPG---ANGTAATADLRREWPDARVLMFTTFDGEEDIYRAMQAGA-RGYLLKSAAREE 115

Query: 123 FHQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               +     G R  +  L  +      +  +S  ERE+L+ ++RG +  +IA  L  + 
Sbjct: 116 LLSAIRAVAAGERHLSAALAQRLAGRVAAPDVSDREREVLQLIARGKANKEIAAALGISE 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +T++ H  N+  K+GV+  A           ++ 
Sbjct: 176 ETVKRHASNLFVKMGVADRAQATSEGIRRGLIQL 209


>UniRef50_Q1IXN1 Two component transcriptional regulator, LuxR family n=10
           Tax=Bacteria RepID=Q1IXN1_DEIGD
          Length = 221

 Score =  214 bits (545), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 11/226 (4%)

Query: 1   MEHSRIKK-RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAV 59
           M      +   V L++   +   G+       +           +E+   A  R+    V
Sbjct: 1   MTDPTPSRPVRVLLVDDHAVVRQGLRLFLSLDSQIEVVGEAANGEEALAAA-ERLHPDVV 59

Query: 60  IFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST 119
           I           +G+     L  + P T  + +     E ++ G++    + G + K ++
Sbjct: 60  IMDLMMP---VMDGIQATRLLRRQHPDTEVIALTSTLEEHKVNGAIDAGAM-GYMLKDAS 115

Query: 120 LEIFHQELFLSLNGVRQATDRLNNQWYIN-----QSRTLSPTEREILRFMSRGYSMTQIA 174
            +     +  +  G  +       +   +        TL+P E  +L+ ++RGYS   IA
Sbjct: 116 SDTLADAIHAAARGEVRLHPEAARRLVRDFRTPEMRETLTPKEVIVLQLIARGYSNRDIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
                   T++ H   ++ KLG+ S       A      R  ET  
Sbjct: 176 RDQGVTEATVKTHVSRLLGKLGLESRTQAALYALRHGLARLEETGG 221


>UniRef50_B2JSN3 Two component transcriptional regulator, LuxR family n=28
           Tax=Proteobacteria RepID=B2JSN3_BURP8
          Length = 210

 Score =  214 bits (545), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G++ +                 E   D +   +   ++   +    
Sbjct: 2   IRILIADDHAIVRGGLKQIIATTNDIVVAAEAAQGSE-VVDKLRTCAVDLLLLDMTMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  +  +  + P    LV++  D       +L      G L+K S  ++    + 
Sbjct: 60  --ISGVDLIRRVRAEQPALPVLVLSIHDEAQVASRALRAGAT-GYLTKDSDPDVLLAAIR 116

Query: 129 LSLNGVRQATDRL-------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
              +G R    +L        ++  +     LS  E ++L+ ++ G S+ +IA+    + 
Sbjct: 117 KLADGGRFIDPKLVDAMVFETHRGDMPPHEVLSDREFQVLQMLAAGKSINEIADICALSA 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           KTI  HK  +M KLG++++A ++  A     +
Sbjct: 177 KTISTHKMRLMQKLGLANNAEVIRYAIRHGLI 208


>UniRef50_B0MVU6 Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM
           17216 RepID=B0MVU6_9BACT
          Length = 216

 Score =  214 bits (545), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 15/218 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++   + L++   +   G+  L  ++ G        T  E F   +       V   F+ 
Sbjct: 1   MELCRIILVDDHSLFRSGMRGLLDRYDGIRVVGEASTG-EEFLAMLPATEADVVFMDFAM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G     +     P  + + ++    E      +      G L K S ++   +
Sbjct: 60  PGM---NGAETTEKALALEPGLKVITLSMFGDENYYSRMVQAGA-KGFLMKDSPMDEVLR 115

Query: 126 ELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIAE 175
            +     G     + +                     LS  E EIL  + RG S  +IA+
Sbjct: 116 AIETVAAGGTYFCEEVLRSLASRMQTAVSGYEGSDERLSTREIEILVCVCRGLSNQEIAD 175

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +L  + +T+  H+ N++ K G  + A L+  A     +
Sbjct: 176 ELFISKRTVDKHRANILEKTGCKNTASLVVYAVRHGLV 213


>UniRef50_C0N6H7 Response regulator receiver domain protein n=1 Tax=Methylophaga
           thiooxidans DMS010 RepID=C0N6H7_9GAMM
          Length = 214

 Score =  214 bits (545), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 83/212 (39%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G+  L  +           + ++++Q     IS   ++   S    
Sbjct: 5   IRVMLVDDHAVVRSGLCRLLEQNTDISVVGEAESGEQAYQTYPE-ISPDVLVMDMSMPGM 63

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  +  ++   + ++ +  +     I SL+   + G ++K+   E   + + 
Sbjct: 64  G---GLEAVRRILNRWSGAKVIMFSMHENATYAIQSLTAGAM-GYVAKSGHAEDLVKAVR 119

Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
              +G    +  + ++          N ++ L+  E E+ R ++ G  +  IA +L    
Sbjct: 120 EVKSGKSFLSSDMAHKVALQSLAGDDNPTQRLTSREFEVFRLLAEGKLVDDIASRLNIGQ 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           KT+  ++ ++  KLG+ S   L+  A     +
Sbjct: 180 KTVANYQTSLKQKLGIHSPVDLVRLAMKYGVI 211


>UniRef50_C1TQ52 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TQ52_9BACT
          Length = 214

 Score =  213 bits (544), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 79/215 (36%), Gaps = 15/215 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   +   G+++L  +             +E+       I     +      + 
Sbjct: 3   IKILLADDHKILREGVKALLNRQEDMEVVAEAGNGEEAL-SIAGEIRPDVTVMDVMMPQM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+     +       R + ++     + +   L    L G L K        + + 
Sbjct: 62  ---DGIEATRRIVEDGSS-RVVALSMYADRSFVSEMLKVGAL-GFLLKDCASTELVEAVR 116

Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
             ++G       +++             +    L+P E+EIL  ++ G +  ++AE+L  
Sbjct: 117 KVMDGEIYLGPSISHIVAKLYVSSLHDPDDIEPLTPREKEILMLLAEGNTNREVAERLHL 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +IKT+  H+ ++M+KL + + A L++ A     + 
Sbjct: 177 SIKTVGTHRQHIMNKLKLKNLADLVKYAIRNGMIS 211


>UniRef50_C4XMF2 NarL family two-component response regulator n=1 Tax=Desulfovibrio
           magneticus RS-1 RepID=C4XMF2_DESMR
          Length = 218

 Score =  213 bits (544), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 83/222 (37%), Gaps = 19/222 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +  + + +++   +   G++++ R+           +  E+ + A         +   S 
Sbjct: 1   MPSKRLLIVDDHPLFREGLKAILRRDPSYAVAGEAGSYAEALRTA-KDCRPDLAVLDISL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                R G+    EL    P    L+++       +  +L    L G L+K +  +    
Sbjct: 60  P---DRSGIQLARELRQMLPSLGILMVSMHAKVDYVAEALKVGAL-GYLTKDAATDNLLS 115

Query: 126 ELFLSLNGVRQATDRL--------------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171
            L     G       L                +   +   +L+P ERE++R +  G S  
Sbjct: 116 GLRAVAAGQPWLDPTLSVEISRSLLAKTPRAEEESHSAYDSLTPREREVMRLVVEGLSNK 175

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           ++A  L+ ++KT   H+ ++M KLG+ +   L+  A  L  +
Sbjct: 176 EVAAALEISVKTAEHHRGSLMRKLGMQNSVELVRYATKLGLI 217


>UniRef50_A7NP18 Two component transcriptional regulator, LuxR family n=12
           Tax=Bacteria RepID=A7NP18_ROSCS
          Length = 222

 Score =  213 bits (544), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 14/222 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            S +    + L +   M   G+  L  +  G        T +E    A + +    V+  
Sbjct: 1   MSTMP-IRILLADDHRMFRQGLRELLERKGGFIIVGEASTGREVLAQAAA-LRPDIVLLD 58

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
                    +G++   +LA   P  + +++     +  L  ++        L K +  + 
Sbjct: 59  IQMPE---IDGVAVARQLAQTHPDVKVIMLTMYRQDQHLFEAIKAGARA-YLLKDADADE 114

Query: 123 FHQELFLSLNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
               +     G                        +  L+  ER+IL  ++ G+    IA
Sbjct: 115 LIDVIERVHRGEAALDPTVTLRVFDEFRRLSIDQDAEQLTERERDILTLLAEGHDNRTIA 174

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           ++L  + KT+      +  KLGVS+       A     +   
Sbjct: 175 QRLFLSEKTVGNRLSEIFQKLGVSNRTQAALVAVQRGLIAPP 216


>UniRef50_Q1GZT3 Two component transcriptional regulator, LuxR family n=10
           Tax=Proteobacteria RepID=Q1GZT3_METFK
          Length = 215

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 80/219 (36%), Gaps = 13/219 (5%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            S      V + +   +   G++ +  +            + E+            V+  
Sbjct: 1   MSFTSTIKVVIADDHAILREGLKQILAETEDIEVVADAKNAAEA-IKLAGTKGLDVVVLD 59

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            S      R G+     +  + P    L+++    +A  I +L    + G LSK S  + 
Sbjct: 60  ISLP---DRSGIEACNIIKKEHPGVAVLMLSMHREDAYAIRALRAGAV-GYLSKQSASDQ 115

Query: 123 FHQELFLSLNGVRQAT--------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
               +     G +  +        D+++         TLS  E + L  ++ G S+++IA
Sbjct: 116 LVTAIRTVAKGKKYISAEVALALADQVSGGLEKPIHDTLSNREFQTLTMIASGLSVSEIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           E L  ++KT+  ++  ++ KL +  +A L   A     +
Sbjct: 176 ENLSLSVKTVSMYRARLLEKLNLRHNAELTHYAIKNNLI 214


>UniRef50_C0N7Q7 Sigma-70, region 4 family n=1 Tax=Methylophaga thiooxidans DMS010
           RepID=C0N7Q7_9GAMM
          Length = 226

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 75/222 (33%), Gaps = 12/222 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L++   +   G  SL +K              E++     +     V+   S    
Sbjct: 5   ITIMLVDDHAIVREGYRSLLQKQDNLEVIAEACDGTEAYSQY-KKYQPDIVVMDISLPGQ 63

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  +     + + LV +     +  + +     L G ++K+S  E   + + 
Sbjct: 64  ---SGLKAIERIRQFDAKAKILVFSMHQNPSFALQATRAGAL-GYITKSSDPEDLIRAIA 119

Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
                    +  +             +    L+  E EILR +    S   IAE L  + 
Sbjct: 120 EVAKNKHTLSADIAQALAMEKLGQEQSALDELTVREFEILRLLVDAKSNQDIAELLNISP 179

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLH 223
           KT+    + +  KLGVSSD  L   A  +  +   +  +  H
Sbjct: 180 KTVSNSHYIIKKKLGVSSDIELTRLAIKMNLVNLLDLVDEAH 221


>UniRef50_A6BYP5 Response regulator receiver domain protein n=1 Tax=Planctomyces
           maris DSM 8797 RepID=A6BYP5_9PLAN
          Length = 221

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 16/223 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M     +K  V +++   +   G   L              +  ++ +  M       +I
Sbjct: 1   MSQVNQQKTKVMIVDDHPIVREGYSRLIEHQDDLQVCGEADSKVDAIRKIMEN-PPDLII 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S    +   GL  + ++  +F + + L ++  D       SL    L G ++K    
Sbjct: 60  VDISL---KDGSGLELIKDVKAQFSQIKMLTVSMHDETLFAERSLRAGAL-GYVNKQQAP 115

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWY-----------INQSRTLSPTEREILRFMSRGYS 169
           E   + ++  L G    +  +  +              +   +LS  E E+   +  G +
Sbjct: 116 EQLIKAIYQVLKGKVYLSAAVTERMICRSIGSDNYSDQSPIESLSDRELEVFEQIGEGET 175

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
              IA++L  + KT+  ++ N+  KL + +   L   A   + 
Sbjct: 176 TRSIAQKLNLSSKTVETYRENIKHKLNLENATALTRHAIQWVL 218


>UniRef50_A1K960 Probable transcriptional regulator, LuxR family n=1 Tax=Azoarcus
           sp. BH72 RepID=A1K960_AZOSB
          Length = 209

 Score =  213 bits (544), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 71/211 (33%), Gaps = 13/211 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V + +   +   G+                   Q +  + +       V+   +     
Sbjct: 3   KVLIADDHAVVRGGLRQFLSSTEEFDIVAEAANGQTAL-ELVRTSGCDVVLLDITLP--- 58

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  L  +    P    L+ +    +   + +L+     G L+K S        L  
Sbjct: 59  DLNGLEVLKRIKRSKPDLPVLIFSMFSEDEFALPALNAGA-SGYLNKDSPPAQILAALHT 117

Query: 130 SLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            + G R  +  L  +                LSP E  +L  +S+G  +T+I EQ   ++
Sbjct: 118 VVAGARYVSPSLAERLLAGTMSPGKRLPHENLSPREMAVLLLLSKGVPLTRIGEQFHLSV 177

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           KTI  ++  ++ KL ++S+A +         
Sbjct: 178 KTISTYRARILEKLDLASNAEITRYVLQHKL 208


>UniRef50_B2G7N1 Two component response regulator n=7 Tax=Lactobacillus
           RepID=B2G7N1_LACRJ
          Length = 217

 Score =  213 bits (543), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 17/219 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           NV + +   +   GI  L            T +  +++   + +     +I   S     
Sbjct: 3   NVLVADDHAIVRSGISYLVDLQPNFTVVDGTASGTDTYIR-VEQGGIDILIMDLSMP--P 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL     +  KFP+ + ++++  + +  +  +++   +  +L K+S        L  
Sbjct: 60  GENGLITTRRIHDKFPKVKIIILSMHEEQEYINKAMANGAMSYIL-KSSPDSEIVNGLKH 118

Query: 130 SLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +NG +     +              N   +     LS  E+E+   ++ GYS  +I+++
Sbjct: 119 VINGEKYLDANIIVSKKDIKEINASGNILKLKGYNGLSKREKEVFPLIALGYSNKEISQK 178

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +  + KT+ AHK N+  KL +     L++ A     +  
Sbjct: 179 MFISTKTVEAHKANISRKLHLHGRVELVQYAIHHHLIDL 217


>UniRef50_B1Y1Z3 Two component transcriptional regulator, LuxR family n=1
           Tax=Leptothrix cholodnii SP-6 RepID=B1Y1Z3_LEPCP
          Length = 235

 Score =  213 bits (543), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 13/221 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            ++ +++  V+   G++ +              +  ++  + M        I   S    
Sbjct: 13  LHILIVDDHVIVREGLQRILEATGAGWVVAEASSGFQAL-EVMRHQPIDLAIVDLSMPGM 71

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  +  +FPR R LV++    E   + +      +G ++K          + 
Sbjct: 72  ---NGLDLIKRIRTEFPRVRVLVLSMHAEEQYAMRAFKAGA-NGYVTKDGASAELVNAVR 127

Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G    T  L  +                LS  E E+LR +  G  +T IAE L  +
Sbjct: 128 KVATGGAYVTASLAERVVLQLNGATTAPGHAQLSDRELEVLRRIVAGERITDIAEALHLS 187

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNV 221
           +KT+  HK  +  KL + + A L+         +  +   +
Sbjct: 188 VKTVSTHKSRIQEKLQLPTMAALIRYGMAHGLAQRDDEPGL 228


>UniRef50_A1ZYF0 DNA-binding response regulator, LuxR family n=1 Tax=Microscilla
           marina ATCC 23134 RepID=A1ZYF0_9SPHI
          Length = 218

 Score =  213 bits (543), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 78/219 (35%), Gaps = 19/219 (8%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            VA+ +  V+   G+ ++               + +   D +       ++         
Sbjct: 4   KVAIADDHVLFRKGLVTILELDDNIEVVYGA-DNGKELIDKVDAQPPDVILMDLKMP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+     +  K+P  + LV++  D E  +I  L     +G L K +  +     +  
Sbjct: 60  VMDGMEATKIIKAKYPEVKVLVLSMYDEEKFIIHCLELGA-NGYLLKNTDPDELVHAIGT 118

Query: 130 SLNGVRQAT--------------DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
            +                      R   +     S  L+  E+E+L  + +  +  ++AE
Sbjct: 119 VMAKDFYFNNHISTVMLKGLNQKKRAKGKPQFENSIELTKREQEVLELICKELTTPEMAE 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +L  + +T+  H+ N++ K G  + AGL+  A     + 
Sbjct: 179 KLFISNRTVEGHRKNLLEKTGAKNTAGLVVFALKNELVE 217


>UniRef50_A1WBJ7 Two component transcriptional regulator, LuxR family n=30 Tax=root
           RepID=A1WBJ7_ACISJ
          Length = 239

 Score =  212 bits (542), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 13/215 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + +++   +   G+     +             +E+  D +       ++   S  
Sbjct: 29  SMIKIGIVDDHAIVRAGLRQFLSEHVDLRVVGEASNGREA-IDLVRVHEIDVLVMDLSMP 87

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL  L  L  K P    L+++    E   I  +      G L+K    +   + 
Sbjct: 88  GQ---SGLDALAMLRAKAPDMGILILSGYPEEHYAINLIRQGA-SGYLNKECEPKEIVEA 143

Query: 127 LFLSLNGVRQATD--------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
           +     G R  T         +LN +        LS  E ++   +++G +   IA+ L 
Sbjct: 144 IRTIALGRRYLTPSVADLLAQQLNRKDDAPPHEQLSEREFQVFLKLAKGETAGDIAKSLS 203

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            ++KT+  ++  +M K+G+SS++ L   A     +
Sbjct: 204 LSVKTVSTYRTRLMEKMGLSSNSDLTYYALKNKLI 238


>UniRef50_A9B5L0 Two component transcriptional regulator, LuxR family n=1
           Tax=Herpetosiphon aurantiacus ATCC 23779
           RepID=A9B5L0_HERA2
          Length = 207

 Score =  212 bits (542), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 78/211 (36%), Gaps = 10/211 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +   G+ ++                Q++  + + +     V+        
Sbjct: 2   IRVLVVDDHPVVRHGLMAMLGWEQDFEPVGDAADGQQA-VNLIEQQQPDVVLLDLRLP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            +  G+  +       P TR LV+   D +  +  +L+     G L K ++ E   + + 
Sbjct: 59  -QLSGIEVMRHTRASAPNTRFLVLTTYDTDEYIGPALNAGAA-GYLLKDASPEEVFRAIR 116

Query: 129 LSLNGVRQA----TDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               G          R+  +     +   LS  E ++L+ + RG S   IA  L  +  T
Sbjct: 117 SIYEGGAALQSGIAARVLKRLATEPAEDELSQRELDVLQLLVRGESNKAIALSLNISENT 176

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           I++H  ++ SKL V S A  +  A     ++
Sbjct: 177 IKSHVSHIFSKLDVRSRAEAVAVALQRGLVK 207


>UniRef50_B2J8J5 Two component transcriptional regulator, LuxR family n=3
           Tax=Cyanobacteria RepID=B2J8J5_NOSP7
          Length = 211

 Score =  212 bits (541), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 72/216 (33%), Gaps = 6/216 (2%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M  S+     + L +   +    +    +  +      H    +E+  +   +      +
Sbjct: 1   MIMSQSNVIRILLADDHPILGQALTMFLQCESDMTVIGHAGDGREAL-ELFHQHQPDVAL 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                 + E   G   +  +  KF   R +V+   D +  +   L      G L K +  
Sbjct: 60  MDLRMPKME---GADAIAAICAKFKHARIVVLTTFDGDEDIYRGLRAGA-KGYLLKGAEP 115

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                 +     G +     +  +      S  LS  E E+LR +++G +  QI+  L  
Sbjct: 116 NELLDAIRTVHKGQKYIPPTIAAKLAERMSSEELSDRELEVLRLIAKGKNNQQISNVLNI 175

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
              T+R H  N+  KL VS     L  A     +R 
Sbjct: 176 AESTVRFHTNNIFGKLNVSDRTQALVTALNRGIVRL 211


>UniRef50_B1ZT64 Two component transcriptional regulator, LuxR family n=2
           Tax=Verrucomicrobia RepID=B1ZT64_OPITP
          Length = 274

 Score =  212 bits (541), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 80/220 (36%), Gaps = 17/220 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
               K  + +++   +  +G+ ++               S  +  + M ++    VI   
Sbjct: 37  PATTKTRIYVVDDHPLMRMGLRAMINGEPDMEVIGEAADSATATAEIM-KLRPDLVIADI 95

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           S   +    G+  +  +    P    +V++  D     +  L       V+ +  T  + 
Sbjct: 96  SLRGN---SGIELIKNVKAFDPGIDVVVVSMYDESIYALRVLKAGARAYVMKQDVTTRVL 152

Query: 124 HQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMT 171
              +  + NG    ++R+  Q               +   +LS  E EI+  +  G    
Sbjct: 153 -DAIRRARNGQLFVSERVATQMLNRFVDGTEDGAADSPVSSLSDRELEIVNLIGEGLPTR 211

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           +IA +L  +IKT+  H+ ++  KL +++   L++     +
Sbjct: 212 EIAAKLFLSIKTVETHRVHIKRKLNLANATQLVQFCVRWV 251


>UniRef50_B7AAT6 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermus aquaticus Y51MC23 RepID=B7AAT6_THEAQ
          Length = 207

 Score =  212 bits (540), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 11/207 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L+E  ++   G+  L              + +E+  + + ++     I   S    
Sbjct: 2   IRVVLVEDHLLVRSGLRHLLEARGPVRVVGEAGSCREAL-ELLEKVQADVAILDVSLP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G++    L  +FP  R L ++  +    + G L      G +SKA+  +     + 
Sbjct: 59  -DGTGIALCQRLRERFPELRLLALSMHEDLEYVRGFLQAGG-QGYVSKAAVDQELLDAVL 116

Query: 129 LSLNGVRQATDRLNNQWY------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
               G R     L  +          +   LSP E E+LR +++G S  ++AE+L  + K
Sbjct: 117 AVARGERYLNPALAMRLAMELVRESAEEAPLSPREEEVLRLLAQGLSHKEVAEKLGISEK 176

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209
           T+  ++   M KLG++S + LL  A  
Sbjct: 177 TVATYRERGMEKLGLASRSELLRYAAR 203


>UniRef50_A1SGL7 Response regulator receiver n=1 Tax=Nocardioides sp. JS614
           RepID=A1SGL7_NOCSJ
          Length = 213

 Score =  212 bits (540), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 79/217 (36%), Gaps = 17/217 (7%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71
            +++   +   G+  L    AG           E    A +  +   V+         +R
Sbjct: 2   LVVDDQELFRRGLTMLLGTEAGIEVVGEAGDGVEGTNLA-ATAAPDVVLLDIRMP---KR 57

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
            G+     +    P  + +++   D EA L  ++      G L K S++E   Q + +  
Sbjct: 58  SGIEACLAIKEAVPSAKIIMLTVSDEEADLYEAVKSGA-SGYLLKDSSIEEVAQAVRVVA 116

Query: 132 NGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
           +G    +  +  +                    L+  E E+LR +++G +  +IA++L  
Sbjct: 117 DGQSLISPSMAVKLIDEFKQMSRPERDHVPGLRLTERELEVLRLVAKGMNNREIAKELFI 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           +  T++ H  N++ KL + S    +  A     +   
Sbjct: 177 SENTVKNHVRNILEKLQLHSRMEAVMYAVKEKLLELP 213


>UniRef50_C6XAP6 Two component transcriptional regulator, LuxR family n=3
           Tax=cellular organisms RepID=C6XAP6_METSD
          Length = 214

 Score =  212 bits (540), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G+  L  + +G        + ++++Q     +     +   S    
Sbjct: 6   IRVLLVDDHTVVRSGLCRLLEQHSGIKVVAEAESGEQAYQVFGEYL-PDVTVMDLSMPGM 64

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  +  ++   R L+ +  +  A  + +L      G ++K  + +   + + 
Sbjct: 65  G---GLEAMRRILARYRTARVLIFSMHENAAFAMQTLKSGA-RGYVAKTGSFDELVKAVV 120

Query: 129 LSLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G    +  +  +          +    LSP E E+ R  + G +  +IAE LK + 
Sbjct: 121 EVARGKSYISTSIAQKIALQTVIGDGDLISQLSPREFEVFRLFAEGKNAEEIAEVLKISQ 180

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           KT+  +   V  KLG+S+   ++  A     +
Sbjct: 181 KTVANYHTLVKQKLGLSNPVEMVRFAIKHGLI 212


>UniRef50_D2AX12 Response regulator receiver protein n=100 Tax=Actinobacteria
           (class) RepID=D2AX12_STRRD
          Length = 239

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 18/223 (8%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
             + +  V +++   +   G+  +                 ++      R+    V+   
Sbjct: 6   PTLPRIRVLIVDDQPLVRRGLSLILSPDPSFEVVGEAENGAQA-VTLARRLRPDVVVMDI 64

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
                   +G+    ELA   P  R L ++  D++  ++G+L      G L K S+ E  
Sbjct: 65  RMP---VLDGVGATRELAATVPDCRVLALSTFDLDEYVVGALRAGAY-GFLPKDSSPEDL 120

Query: 124 HQELFLSLNGVRQATDRL-------------NNQWYINQSRTLSPTEREILRFMSRGYSM 170
              +     G      RL               +        L+P E E+ R M+ G   
Sbjct: 121 SAAIRTVHAGEAAVAPRLLTRLISTYVRAPHGTRPTPTGLGELTPREVEVWRLMATGLDN 180

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           T I+  L  ++ T++ +  ++  KL V   A  +  A     +
Sbjct: 181 TGISRTLDISLSTVKNYITSIFDKLAVRDRAQAVIVAYESGLV 223


>UniRef50_Q6ADI3 Two-component system, regulatory protein n=1 Tax=Leifsonia xyli
           subsp. xyli RepID=Q6ADI3_LEIXX
          Length = 207

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 79/210 (37%), Gaps = 7/210 (3%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L++   +   G+ +L                 E ++  +       V+   +    
Sbjct: 2   IRIVLVDDHPILRHGMRTLLDTQEDFEVVGDCGD-PEEYRLLLKSARPDIVLMDLAL--G 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G++         P T  LV    D +A  + SL       +L  ++ +E     + 
Sbjct: 59  GDTDGVALTAHTRATSPSTAVLVFTTYDSDADFVRSLDAGASGYLLKDSTPVE-LFAAIR 117

Query: 129 LSLNGVRQATDRLNNQWYIN---QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
            + +G    +  + ++          +L+P E E+L  ++ G +  Q+ E+L  +  T++
Sbjct: 118 TARDGGSALSPAVASRLMDRMRAPQESLTPREIEVLALLATGRTNRQVGERLFVSETTVK 177

Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            H  ++ +KLGV + A  +  A     +R 
Sbjct: 178 THVNHIFTKLGVDTRAAAVSRAMKEGLIRL 207


>UniRef50_A4J6C2 Two component transcriptional regulator, LuxR family n=2
           Tax=Clostridia RepID=A4J6C2_DESRM
          Length = 218

 Score =  211 bits (539), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 17/213 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +  ++   G+  +              T+ +   D   +     V+   +    
Sbjct: 5   IKLLIADDHILIREGLRKILSIEPHISVVGEV-TNGQQAVDYCLKNPVDIVLMDINMP-- 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+    ++    P    + +   D +  L   L    + G + K    +   + + 
Sbjct: 62  -IMNGIEACRQIKKLNPNIGIIALTIHDQDEYLFE-LIKYGISGYVLKDIHPDQLIKTIL 119

Query: 129 LSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGYSMTQIAEQ 176
               G       L  +     +R             L+  E E+L+ +++G S   IA  
Sbjct: 120 GVAQGESFIPPSLTARVLAEFTRLSSGDYSEKKHLNLTEREIEVLKQVAKGQSNKAIANA 179

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           L  + KT++ H  N+  K+GV+        A  
Sbjct: 180 LYISEKTVKNHLTNIFQKIGVADRTQAALYAIK 212


>UniRef50_Q07TZ6 Two component transcriptional regulator, LuxR family n=16
           Tax=Rhizobiales RepID=Q07TZ6_RHOP5
          Length = 237

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 86/232 (37%), Gaps = 20/232 (8%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           ++HS   +  V + +   +   G+++L                  + + A+  +     +
Sbjct: 13  IKHSSPSRLRVFIADDHPLILSGMKTLLATDPEIELVGEAVDGPSALRRAID-LDPDVAV 71

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
           F  S        G+  + +L    P  R LV++  +  A L   L    + G + K S  
Sbjct: 72  FDLSMPG---LNGIEVIQKLFAVRPHARVLVVSVHEDGANL-RRLLKMGVAGYILKRSAT 127

Query: 121 EIFHQELFLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGY 168
           E   + +    +G       +  Q                    LS  E+E+L+  + G+
Sbjct: 128 EELVRGIHAVAHGGIYLDPAIAGQAVGRLAQAASDSVEGGCLAHLSAREKEVLQLAAVGH 187

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSN 220
           S   I+ +L+   K++  +K   M KLG +S   L+  A   L M   E++N
Sbjct: 188 SNKVISAKLEVGPKSVETYKARAMEKLGFTSRVDLIRFA---LSMGWLESTN 236


>UniRef50_Q39C19 Two component transcriptional regulator, LuxR family n=60
           Tax=Betaproteobacteria RepID=Q39C19_BURS3
          Length = 271

 Score =  211 bits (538), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 15/226 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            N+ L++   +   GI  L     G    +    +      A+ +  F  ++   S    
Sbjct: 3   LNILLVDDHAIVRQGIRQLLIDR-GVARDVTEAENGGDAVAAVDKQEFDVILLDISLP-- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  L  L  K PRT  L+ +    +   + +L      G LSK          + 
Sbjct: 60  -DTNGIEVLKRLKRKLPRTPVLMFSMYREDQYAVRALKAGAA-GYLSKTVNAAQMIGAIQ 117

Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G +  +  +                   LS  E + L  ++ G  +T IA  L  +
Sbjct: 118 QVAAGRKYVSPAMAEALAEYVSFENEPLPHEKLSDREYQTLCMLASGKRLTDIANTLSLS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEA--ADILLCMRHCETSNVLHP 224
           +KT+  ++  ++ K+ +S++A L     ++ L+ M     +    P
Sbjct: 178 VKTVSVYRSRLLEKMRLSNNAELTFYVMSNRLVDMAPTAGAGSSRP 223


>UniRef50_C6D0G6 Two component transcriptional regulator, LuxR family n=17
           Tax=Bacteria RepID=C6D0G6_PAESJ
          Length = 225

 Score =  210 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 23/222 (10%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + L +   +   GI                +  +E+ + A   +    V+   +   
Sbjct: 2   KIKILLADDHQIVLKGISFFLAMQPDFELVGEAHNGKEAVEKA-GELQPDIVLMDLNMP- 59

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
               +G+     +  + P  + LV+     ++ ++ +L    + G + K    +   + +
Sbjct: 60  --IMDGIEASALIKEQHPHIKVLVLTSFADQSHIVPALQTGAI-GYMLKDVEPDQLAEAI 116

Query: 128 FLSLNGVRQATDRLNNQWY------------------INQSRTLSPTEREILRFMSRGYS 169
             +  G  Q    ++                            L+P E E+L  +++G S
Sbjct: 117 RSAYKGNIQLHPDISRALLSRPEPEPRPEPVIQHSNRDKSLEALTPRELEVLELLTKGLS 176

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
              IA+ L    KT++ H  +++SKL +S        A  L 
Sbjct: 177 NKDIAQTLIVAEKTVKTHVSSILSKLDLSDRTQAALFAAPLF 218


>UniRef50_Q3Z8L1 DNA-binding response regulator, LuxR family n=6 Tax=Bacteria
           RepID=Q3Z8L1_DEHE1
          Length = 224

 Score =  210 bits (537), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 78/218 (35%), Gaps = 19/218 (8%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M+ +++    V L +  V+   G   L ++ +G           E+ + +M ++    V+
Sbjct: 1   MQTTQM--IKVLLADDHVIVREGTRELIQRESGMMVVGEASDGVEAVEMSM-KVHPDVVV 57

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +  R     G+    ++    P T  L++   + E  ++  L        L K    
Sbjct: 58  MDIAMPR---LNGIEATKQIKQLLPTTAILILTAYESEQYILAILEAGAAS-FLLKNVKG 113

Query: 121 EIFHQELFLSLNGVRQATDRLNNQ------------WYINQSRTLSPTEREILRFMSRGY 168
               + +     G          +              ++    L+  E E+L+  +RG 
Sbjct: 114 TQLLEAIRAVYAGESVLQPSTTRRVIDQLINKATKTEEVSAVNPLTDREIEVLKMAARGV 173

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           S   IA+QL  + +TI+ H  N+  KL V S    +  
Sbjct: 174 SNKDIADQLYLSNRTIQTHLSNIFKKLSVGSRTEAILY 211


>UniRef50_B2A6W2 Two component transcriptional regulator, LuxR family n=1
           Tax=Natranaerobius thermophilus JW/NM-WN-LF
           RepID=B2A6W2_NATTJ
          Length = 215

 Score =  210 bits (536), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 76/212 (35%), Gaps = 17/212 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            +V +++   +   G+  L              T++E+      +     V+   S    
Sbjct: 3   ISVLVVDDHAVLGKGLSMLLNSQDDMEVCGQVGTAKEALDTCKEKC-PDVVLLDLSLPDK 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
           +   G   + EL       R L +   + EA     +       +L KA+  +     + 
Sbjct: 62  Q---GHEIIKELKESC-SARVLALTMHEDEAYFKRVVEAGGDGYILKKAAD-DELISAIR 116

Query: 129 LSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
               G                     Q    ++  LS  E+E+L+ ++ GY+  +IAE+L
Sbjct: 117 SVYQGEVIVDKTFTKLLIDYYRNPDKQSGTEKNYDLSDREKEVLQLIALGYTNKEIAEKL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
             +IKT+  H   +  KLG++  + L+  A  
Sbjct: 177 YISIKTVETHIARIKEKLGLNRRSELVRYAMR 208


>UniRef50_D1C1C8 Two component transcriptional regulator, LuxR family n=3
           Tax=Bacteria RepID=D1C1C8_SPHTD
          Length = 237

 Score =  210 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 16/220 (7%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
             K  +V L++  V+    +  L                + + Q    R     ++   S
Sbjct: 19  PAKAISVLLVDDHVLFRQALRHLLEAEPDIRVIGEAGDGRSA-QQLAERFHPDVILMDIS 77

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                  +G++   +L    P T+ +++     +  +I ++     D  L K S      
Sbjct: 78  MPG---VDGVTATRDLKAGIPNTKIIILTMFAEDGHVIRAIRAGA-DAYLLKNSESSKVI 133

Query: 125 QELFLSLNGVRQATDRLNNQW-----------YINQSRTLSPTEREILRFMSRGYSMTQI 173
             +     G      +L  +                   L+  E ++LR ++ G S  +I
Sbjct: 134 DAIRAVARGESVIEPQLATKLLNEFRRISEFREEETVAGLTEREIQLLRLVASGMSNKEI 193

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           A +L     T++     +  KL V         A     +
Sbjct: 194 AAELSLAESTVKNRLSLLFEKLDVKDRTQAAIYALSHGLI 233


>UniRef50_UPI0001AEC81D LuxR family transcriptional regulator n=1 Tax=Alteromonas macleodii
           ATCC 27126 RepID=UPI0001AEC81D
          Length = 209

 Score =  210 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 11/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +  V+   G+  +                  +   A+ ++S   ++   S  R 
Sbjct: 3   IRVVLADDHVLMRQGVSQMLNANPDISVVGE-CDDGVALIAAVLKLSPDVILMDISMPRM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  + ++  +    + LV++  +    +  ++  +   G + K S+ E   + + 
Sbjct: 62  ---SGLVAIDKILSQRSDAKILVLSMHNEVEYI-EAMRDAGAKGYILKESSGESLVEAIK 117

Query: 129 LSLNGVRQATDRLNNQWYI------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
                     D L            +    L+  ERE+   +  G +  +IAE L  ++K
Sbjct: 118 KVAANKTCFPDELTQSSSDQCQKHVSPLSVLTRREREVFFLVVAGNTSKKIAELLDMSLK 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           T   H+ N+  KL +SS A L+  A     + 
Sbjct: 178 TAENHRSNIYKKLNLSSSAELIRMAGKAGLLE 209


>UniRef50_Q1ASU8 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacteria RepID=Q1ASU8_RUBXD
          Length = 207

 Score =  210 bits (536), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 75/212 (35%), Gaps = 9/212 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++   + + +   M   G+ ++     G           E      S +    V+     
Sbjct: 1   MEGIRILVADDHPMLREGLSAVLGTRPGFEVVGEAGDG-EEVLRLASGLRPDVVLLDLEM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
             +    G+  L  L       + +V    D E  L+ +L      G L K ++      
Sbjct: 60  PGTG---GVEVLRRLRGLDDPPKVVVFTAYDDER-LLEALREGA-RGCLLKGASRTEIFD 114

Query: 126 ELFLSLNGVRQATDRLNNQ---WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            +     G       +  +       +S  L+P E E+LR ++RG +  ++A  L  + +
Sbjct: 115 AVRTVHAGGSVIPPEITARVLKEMRGESEPLTPRELEVLRLVARGLTNREVARALFISER 174

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           T++ H  ++++KL   +    +  A     +R
Sbjct: 175 TVKFHVSSLLAKLRAENRTQAVAIARERGLLR 206


>UniRef50_B8CN77 Nitrate/nitrite DNA-binding response regulator, putative n=2
           Tax=Shewanella RepID=B8CN77_SHEPW
          Length = 206

 Score =  210 bits (535), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 86/210 (40%), Gaps = 9/210 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G+       +          + +   + ++++    V+   +  + 
Sbjct: 2   IRVLLVDDHPLFREGLRYRLSLDSDIEVLAEA-DNGQQALEILNKMPVDLVLTDINMPQM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+  L  +  +    + ++++  D +  ++ ++     DG + K    +   + + 
Sbjct: 61  ---DGMYLLELIKEQELSCKVVMLSMHDNKEYIMATMRYGA-DGYILKDVPGKELIEAIK 116

Query: 129 LSLNGVRQATDR----LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
               G R  +      L+ +    +   ++  E+ +LR +S G +  +IA+++  +++T+
Sbjct: 117 KVAAGKRYFSADVINTLSQELASGKQALVTQREQLVLRLISLGMNNKRIAQEMDVSVRTV 176

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             HK N+  KL + S AGL+  A      R
Sbjct: 177 ETHKRNIKQKLMIDSTAGLVRYAIDHGLDR 206


>UniRef50_B2A8K6 Two component transcriptional regulator, LuxR family n=9
           Tax=Clostridia RepID=B2A8K6_NATTJ
          Length = 228

 Score =  210 bits (535), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 72/218 (33%), Gaps = 22/218 (10%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           K   + L +   +   G++ +               + E   D +  +    ++   +  
Sbjct: 8   KTIRILLADDHALFRQGLKKILDMEEDLA-VCGEAQNGEEVVDKVKLLKPNIILMDINMP 66

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+     +    P T+ + +   + E  L   +       +L    T     Q 
Sbjct: 67  ---LLNGVEATKYVKEVSPETKVIALTIHEDEEYLFEIVKEGAAGFLLKDVETPT-LVQA 122

Query: 127 LFLSLNGVRQATDRLNNQWYIN-----------------QSRTLSPTEREILRFMSRGYS 169
           +     G       + ++                         L+  E+EIL  M++GY+
Sbjct: 123 IQEVNKGNSFIHPTITHKLLGEFNRLAQNSPRNIKSDEAVQSELTGREKEILELMAQGYT 182

Query: 170 MTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
             +I+++L  + KT++ H  N++ K+ V+     +  A
Sbjct: 183 NKEISKELYISEKTVKNHVSNILRKMDVTDRTQAVITA 220


>UniRef50_A5V148 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacteria RepID=A5V148_ROSS1
          Length = 216

 Score =  210 bits (535), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 79/222 (35%), Gaps = 18/222 (8%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M+ S     ++ ++E   +   G+ ++                 E  ++A+ R+    ++
Sbjct: 1   MQQSD---ISILIVEDQTLMRQGLRTILDLEESIRVVGEARDGAEGVREAL-RLRPDIIL 56

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                       G+  +  +   + + R +V+   D +  +  S+    + G L K +  
Sbjct: 57  MDVQMP---VMNGVEAIRAIIAAWSQARIIVLTTFDRDDYVFQSVRAGAM-GYLLKDAPA 112

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQSRT----------LSPTEREILRFMSRGYSM 170
           E   Q +     G       + ++     +            LS  ERE+L  +++G S 
Sbjct: 113 EALLQTIRRVHAGEVFIQPEIASRTLREAATGRRRAGTIPFDLSEREREVLVLLAQGLSN 172

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
            +IA +L     T++ H  N+++KL   +       A     
Sbjct: 173 REIAGRLSITEGTVKNHVSNILAKLQAENRTQAANIARREGL 214


>UniRef50_Q5NZX4 Two-component response regulator n=3 Tax=Betaproteobacteria
           RepID=Q5NZX4_AZOSE
          Length = 211

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 12/206 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G++                   E    A+   +   ++   S    
Sbjct: 2   IRVLVADDHFLVREGLKMTIAAMQDVEVVAEATNGGEVL-AAIKTCNAHVLLLDMSMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  +  +  ++P    LV++           L      G ++K    EI    + 
Sbjct: 60  --LSGVDLVRRVKSEWPGLPILVLSMYGETQLAAKVLQSGA-SGYVTKGKGREILLSAIR 116

Query: 129 LSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
              +G R     L  +          +    L+  E +ILR +  G S+TQIA +L  + 
Sbjct: 117 KVASGHRYIDPDLAEKILFDVRMPTASVQEQLTHRESQILRMLQAGKSVTQIANELSVSP 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAA 207
           KT+  HK   M KL   ++  LL+ A
Sbjct: 177 KTVSTHKIRAMQKLHCQNNVELLKYA 202


>UniRef50_UPI0001B502C9 two component LuxR family transcriptional regulator n=1
           Tax=Streptomyces hygroscopicus ATCC 53653
           RepID=UPI0001B502C9
          Length = 229

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 10/216 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+  +            T   +E+ + A        V+        
Sbjct: 3   LRVLIADDHAVVRQGLRMILGLDNEIKVVGETTNGREAVRLARELC-PDVVLMDLLMP-- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+S   E+    P    + +     +A ++G++    + G L K +  +     + 
Sbjct: 60  -VMDGVSATAEIRQDIPEVEVVALTSSLDDAMVMGAVRAGAI-GFLLKNAEADDLRNAVK 117

Query: 129 LSLNGVRQATDR-----LNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            +  G    +       +      +    L+  E E+L  ++RG +  +IA  L+   +T
Sbjct: 118 AAAAGQIHVSPAAISRLMGQVREPSGPEQLTERETEVLTMLARGKANKEIARDLRIGQQT 177

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
           ++ +  ++++KLGV S       A     +   E +
Sbjct: 178 VKTYVSHILTKLGVHSRTQAAVYAVQSGLVPAGELT 213


>UniRef50_C1A5E6 NarL family two-component response regulator n=1 Tax=Gemmatimonas
           aurantiaca T-27 RepID=C1A5E6_GEMAT
          Length = 213

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 82/210 (39%), Gaps = 8/210 (3%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            +  V L++   +   G+  L R    +       T  E+    +       VI   +  
Sbjct: 3   TRTRVVLVDDHSLVRRGLAVLLRLDGRHDVVGEAGTG-EAAVPLIEAERPDLVILDLNMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                +GL  L  +  K   TR LV++  D    +  +LS    DG L K S  +     
Sbjct: 62  G---IDGLETLRRVRAKGLTTRVLVLSMHDETHLVGQALSAGA-DGYLLKDSMDDELFFA 117

Query: 127 LFLSLNGVRQAT---DRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           +   L G R      DR   Q    +  +L+  ERE+L+ ++ G + + +AE L  +  T
Sbjct: 118 IESVLRGQRYLAAAIDRARLQESRMRPVSLTAREREVLQLIANGLTTSAVAEALNISPHT 177

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
              H+ N+M KL V +   L+  A     +
Sbjct: 178 ATRHRANLMQKLNVHNQVELVRIAASQGLI 207


>UniRef50_C5T9P3 Two component transcriptional regulator, LuxR family n=1
           Tax=Acidovorax delafieldii 2AN RepID=C5T9P3_ACIDE
          Length = 239

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 80/217 (36%), Gaps = 10/217 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
                + L++   +   G+                 +  ES   A + ++   V+     
Sbjct: 2   TPPIRILLVDDHPLVRDGVRMRLEATEHICVAGEAASVGESLPLAHA-LAPDIVLTDIRM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+        +FPR R LV++  D    +  ++S     G + K +  +   +
Sbjct: 61  P---AASGIHLAAVFREQFPRVRVLVLSMHDDAEYVRRAVSLGA-RGYVLKDAPAQQLIE 116

Query: 126 ELFLSLNGVRQATDRLNNQWYI-----NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +     G    +  L             +R+L+P E  +L+++S G S  +IA  +  +
Sbjct: 117 AIEAVHQGGCYFSPGLEQLLDDAGSVARSNRSLTPREASVLQWVSEGRSNKEIAALMGTS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           ++T+  H+ ++  KL +   A L++ A     + H  
Sbjct: 177 VRTVETHRLHLRRKLRIEGQAALMKYAVDHADLTHDP 213


>UniRef50_B1KE04 Two component transcriptional regulator, LuxR family n=2
           Tax=Alteromonadales RepID=B1KE04_SHEWM
          Length = 206

 Score =  210 bits (535), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 79/209 (37%), Gaps = 10/209 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + +++   +   G+ +                 +E+ +     +    V+   S    
Sbjct: 1   MRIFIVDDHPIFREGLIARLSMDDDFVIVGQAANGKEALEKM-PNLMPDIVLMDISMPEM 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+        KFP  + L+++  D +  ++  L+   + G   K  +       L 
Sbjct: 60  ---NGMDAAEIFKDKFPEIKILILSMHDDKEYVLSVLNRG-VRGYALKDISAAEMFYALR 115

Query: 129 LSLNGVRQATDRLNNQWYINQSRT-----LSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           +  NG    +  +++    +         L+  E+ +LR ++ G +  ++A +L  +++T
Sbjct: 116 VIHNGGIYYSRAISDLLVQSSQEPDKNTVLTTREQTVLRLLASGLNNKELARELDISVRT 175

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           I  H+ N+  KL + + AGL+  A     
Sbjct: 176 IETHRRNIKDKLAIKTSAGLVRYAIDHGL 204


>UniRef50_D1VBH1 Two component transcriptional regulator, LuxR family n=29
           Tax=Actinobacteria (class) RepID=D1VBH1_9ACTO
          Length = 248

 Score =  209 bits (534), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 72/233 (30%), Gaps = 21/233 (9%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
                   V + +   +   G  +L                  + +++  R+    V+  
Sbjct: 20  DPPASPIRVLIADDEGLVRAGFRALVEATPDLTVVAEAADGVAAVRES-RRLRPDVVLMD 78

Query: 63  FSAMRSERREGLSCLTELAIK--FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
                     GL     +A     P    LV+   D +  +  +L       +L      
Sbjct: 79  IRMP---VMNGLEATRLIAADAVRPGPGILVVTTFDDDEYVFEALRAGAAGFILKDTQP- 134

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYI--------------NQSRTLSPTEREILRFMSR 166
           E     +     G       +  +                   + TL+  ER +L  ++ 
Sbjct: 135 ENLLAAIRTVAAGDALLAPGVTRRLIAAFVRVPAPPASPLTGLASTLTDRERAVLTQIAN 194

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETS 219
           GYS  +IA+ L  ++ T++ H  ++++KL     A L+ AA     +     +
Sbjct: 195 GYSNAEIAQALYVSVSTVKTHVGHLLAKLAARDRAQLVIAAYESGLVAPGSAT 247


>UniRef50_B2KBW2 Two component transcriptional regulator, LuxR family n=1
           Tax=Elusimicrobium minutum Pei191 RepID=B2KBW2_ELUMP
          Length = 215

 Score =  209 bits (534), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 80/215 (37%), Gaps = 15/215 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFA-GNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
             + L +   +   GI+S+  +              +E    A+   +    +   +   
Sbjct: 2   IRILLADDHALVRDGIKSILERKGKNISVVAEMGNGKEMLDYAVKNKNIDVYVVDIAMP- 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G++ + +L    P  + +V++  D  A +  +        V+ K S+ +   + +
Sbjct: 61  --ILNGIAAVQKLLKINPDAKVIVLSMYDDRASVEKAFKAGARGFVV-KVSSADEIIEAI 117

Query: 128 FLSLNGVRQATDRLNN----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
                G      +++                    L+P E++IL+ ++ G+S  +IA++ 
Sbjct: 118 KEVSAGRFYLCSKVSKFVVQGFLGKASPSKKDPSGLTPKEKQILQLIAEGFSSKEIAKEF 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
             ++ T+  H+ N+M KL +   A L+  A     
Sbjct: 178 GLSLNTVHVHRNNIMRKLDIHKQAELVRYAIKEGI 212


>UniRef50_Q0A525 Two component transcriptional regulator, LuxR family n=1
           Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A525_ALHEH
          Length = 214

 Score =  209 bits (534), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 77/216 (35%), Gaps = 8/216 (3%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           +        + L++   +   G   L  + +          S ES   A +R  F  V+ 
Sbjct: 3   QRQPPGPLTLLLVDDHAVVRAGYRRLLEQASRCWQVTEA-DSGESAYRACARERFDVVVM 61

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
             S        GL  L  L  + P  R L+ +  +       +L      G ++K+S  E
Sbjct: 62  DISLPG---ISGLETLARLQRRAPEIRVLIFSMHEEPVFAEQAL-SGGAAGYITKSSAPE 117

Query: 122 IFHQELFLSLNGVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIAEQLK 178
           +  + +     G       +  +     +    +LS  E EI R ++ G    +IA  L 
Sbjct: 118 VLVEAVQRIAAGGHYLGPDVRCRHGDADTAGLQSLSAREFEIFRLLAEGCGSAEIARLLN 177

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            + KT+  +   +  KL +++ A +   A     ++
Sbjct: 178 ISYKTVANYGSGIREKLALNNVAEMTRLAIRAGVIK 213


>UniRef50_Q5ZS73 Response regulator GacA n=10 Tax=Gammaproteobacteria
           RepID=Q5ZS73_LEGPH
          Length = 225

 Score =  209 bits (533), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 13/216 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +  +GI  L    +         + +++    +   S   V+        
Sbjct: 8   IKVLIVDDHALVRMGIRRLLEDMSDVDVVADAESGEQAL-AYVKTHSPDVVLLDMKMPG- 65

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G      L    P  + + +     +      L    + G L+K S  E     + 
Sbjct: 66  --IDGWEVTRRLKKTNPNIKVIAVTAICSDPLPTRVLQLGAM-GYLTKESGAEEMAAAIR 122

Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G +  +  +  +           +    LS  E +++  ++ G ++  IA++L  +
Sbjct: 123 KVAKGEKYLSAEIAQKMAINSLQESQDSPFDLLSEREMQVMLMITSGMNVQDIADRLFLS 182

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
            KTI  +++ +  KLG+ +D  L   A     + H 
Sbjct: 183 SKTINGYRYRMFEKLGIKNDVELTYLAMKHRIIEHP 218


>UniRef50_C0A9E4 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A9E4_9BACT
          Length = 227

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 83/207 (40%), Gaps = 5/207 (2%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++  +V +++   +   GI SL R            +++E+F + + + +   V+   S 
Sbjct: 1   MQPISVIIVDDHQLMLEGIASLLRATPDITLVAKAQSAKEAF-ELVKQHNPDIVVADLSM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL  + ++      TR +++        +  + S      VL K+   E    
Sbjct: 60  PG---VTGLDLIQQIKDAGLLTRIIMLTMHRTRLTVHEAFSVGANAFVL-KSDAFEDLVD 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
            +     G    T +    +    + TLSP E+++L  +S G S  +I+ +L  + KT+ 
Sbjct: 116 IIHRVHEGENTLTSKGLPPYEPACAATLSPREKDVLEGISAGLSNKEISRRLAISSKTVE 175

Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLC 212
            H+  +M KL V+    L+  A     
Sbjct: 176 THRSRIMQKLNVTKATELVREAMRSGL 202


>UniRef50_B8GSX5 Response regulator receiver protein n=2 Tax=Ectothiorhodospiraceae
           RepID=B8GSX5_THISH
          Length = 220

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 85/217 (39%), Gaps = 16/217 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFA---GNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
            +V L++   +  +GI  L  + A   G       ++ +E+  +A  R+    V+   + 
Sbjct: 2   IDVLLVDDHELVRMGIRGLLDERAAVTGIQVVGEAHSGEEALVEA-KRLKPDVVLMDINM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL     +    P  + LV+   D    +   +  +   G L+K   +E    
Sbjct: 61  PGIG---GLVATRRIVEAQPSVKVLVLTAMDEGP-VPRWVLEAGASGYLTKGCRIEEMIA 116

Query: 126 ELFLSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            +  ++ G R  +  +  +           N    LS  ER+IL  + +G +   IA  L
Sbjct: 117 AIQGAMQGERHISPAVAQRLALGGLAKGQANPFDELSGRERQILLMILQGQTPQAIATAL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             + KT+  +K  VM KLG+S+D  L+  A     + 
Sbjct: 177 NISPKTVSTYKCRVMGKLGISNDMQLVTLAAQHGLIA 213


>UniRef50_Q09C30 Two-component system regulatory protein n=3 Tax=Proteobacteria
           RepID=Q09C30_STIAU
          Length = 213

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 17/217 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            N+ L++   +   GI SL                 E     +  +S   V+      R 
Sbjct: 2   INIVLVDDHALIREGIRSLLEFTPDLHVVGEASDG-EEAVKRVRELSPDVVLMDVRMPRM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  L  +  + P  R +++   D ++ ++ +L    + G L K  T +     + 
Sbjct: 61  ---TGLEALRAMRREAPERRVVLLTTFDEDSVVVEALRAG-VKGFLLKDVTRDQLADAIR 116

Query: 129 LSLNGVRQATDRLNNQ------------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
              NG       +  +             +      L+  E E++R ++RG S  +IA  
Sbjct: 117 RVANGETLLPPGVAERVQRGFTEVPQEFPHAELPEGLTRRELEVMRLIARGLSNREIATV 176

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           L     T++    N+++KLGV      +  A  L C+
Sbjct: 177 LGTAEGTVKNQTSNILAKLGVRDRTRAVLRAMELGCL 213


>UniRef50_P55184 Uncharacterized transcriptional regulatory protein yxjL n=1
           Tax=Bacillus subtilis RepID=YXJL_BACSU
          Length = 218

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 62/218 (28%), Gaps = 17/218 (7%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  VAL +   +   G   +                         +     ++      R
Sbjct: 5   KIRVALADDQPLVREGFRYVINAQTDMTVSGEAGDG-HDIIALAKQTKPDVILMDVQMPR 63

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G+    ++    P T+ +++   D E  +   +    + G L K +  E     +
Sbjct: 64  ---CSGIEAAKDIMSALPNTKIVILTTFDTEEYVFEGIRAGAV-GYLLKDTLPEELIDAI 119

Query: 128 FLSLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175
             +  G          +                 +   +  E E+L+ M+ G     IAE
Sbjct: 120 RAAARGEAIFRTVTAAKIISETFRAKQQTHAEELAEPFTKRELEVLQQMAYGLRNEDIAE 179

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +L  +  T++ H   ++ K         +  A     +
Sbjct: 180 KLFVSESTVKTHVHRILQKCNAQDRTQAVVFAIRNGIV 217


>UniRef50_Q67MG8 Two-component response regulator n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67MG8_SYMTH
          Length = 197

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 27  LFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERREGLSCLTELAIKFPR 86
           + +               E   +    +    VI   S        G+     +    P 
Sbjct: 1   MLQSEPDLELVGEAGRG-EEAVELTKALKPDVVIMDISLP---DMSGIEATRLIKEAVPE 56

Query: 87  TRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSLNGVRQATDRLNNQ-- 144
           TR + +   + E  ++  L       ++ +++  +     +   + G       +     
Sbjct: 57  TRVIGLTMHEEEPFVLEFLRAGADAYIVKRSAAAD-LVGAIRAVMEGQAVLDPAVTRAVV 115

Query: 145 -----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMS 193
                          +   L+P EREIL  ++ G +  +IA +L  + KT++ H+ N++ 
Sbjct: 116 EGYVSRPGRAVGQPEEPCPLTPREREILVLIAEGLTNAEIARRLYISEKTVQTHRSNMLD 175

Query: 194 KLGVSSDAGLLEAADILLCMRH 215
           KLG+     L+  A     +  
Sbjct: 176 KLGIHDRTELVRYAIRQGLVEP 197


>UniRef50_B0C955 Two-component transcriptional regulator, LuxR family n=4
           Tax=Cyanobacteria RepID=B0C955_ACAM1
          Length = 215

 Score =  209 bits (533), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 16/215 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   +   G+ SL                +++       +    ++        
Sbjct: 2   IRLLLADDQALFRQGLASLLELEEDLSVVGQAQDGRDAIL-LTQTLQPDVILMDVRMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+    E+  +FP  R LV+   D +  +  SL    L G L K++        + 
Sbjct: 59  -ICDGVEATREIHQRFPWIRILVLTTFDEDEYIWTSLQAGAL-GYLLKSTPASQLAAAIR 116

Query: 129 LSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
           +  +G  Q    +  +              N    LS  E ++L  + +G S  +I++ L
Sbjct: 117 MLHDGHFQLGPTIAPKVIAQLRPPPLKNEQNHLERLSDRELDVLNLIGQGKSNREISQIL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
                T++ +   ++  LGV         A   L 
Sbjct: 177 HLTEGTVKNYVSQLLGSLGVRDRTQAALWAQQYLS 211


>UniRef50_C9M8B3 DNA-binding response regulator, LuxR family n=1 Tax=Jonquetella
           anthropi E3_33 E1 RepID=C9M8B3_9BACT
          Length = 212

 Score =  209 bits (532), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 76/214 (35%), Gaps = 7/214 (3%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  V L +   ++  G+++   +              E+    +  +     +     
Sbjct: 1   MSKIRVILADDHPLTRQGLKAYLEREENVALVGEAADGDEA-WKLIEELKPDVALLDIRM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G++    +         +++   D +  ++ SL      G + K ++     +
Sbjct: 60  PG---ADGITLARRIKENKLPVAAIMLTSYDSQQYVLASLKAGA-KGFVLKTTSAGALMK 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
            +     G       + +     +  +  LSP ERE+L   +RG S  ++A QL  + +T
Sbjct: 116 AIQTVATGSLFLDSEVASVVGAQEELTEALSPREREVLLCAARGLSSKEVAAQLYISERT 175

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           ++ H  +V  KLG  +    +  A     M   E
Sbjct: 176 VQTHLASVYDKLGAHNKTEAMLLALKHGLMTLEE 209


>UniRef50_Q60AR8 DNA binding response regulator, LuxR family n=1 Tax=Methylococcus
           capsulatus RepID=Q60AR8_METCA
          Length = 215

 Score =  209 bits (532), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 77/215 (35%), Gaps = 14/215 (6%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  V L++   +   G   L                +E+     +      ++   S  
Sbjct: 3   SKITVMLVDDHAVVRAGYRLLLSGTPNIEVVGEAERGEEAC-QLYADTRPDVIVMDLSLP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GL+ +  +  +    R LV +  D    ++ +L      G ++K+   EI  + 
Sbjct: 62  GIG---GLASIRRIRSRDTSARILVFSIHDELIYVVRALEAGA-RGYITKSCAPEILVEA 117

Query: 127 LFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
           +    +G       +  +                TLS  E ++   +++GY+  ++AE+L
Sbjct: 118 VARIASGESFLEPEIAQRLAMQTLGGAEATTALNTLSAREFDVFLLLAKGYTTREVAEEL 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           +   KT+  +   + SKLGV++ A +   A     
Sbjct: 178 RLGYKTVANYSTLIKSKLGVNTTAEMARLAYQNGI 212


>UniRef50_B4D808 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4D808_9BACT
          Length = 212

 Score =  209 bits (532), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 73/213 (34%), Gaps = 6/213 (2%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            +      + L++   +   G+  L  +              E       +      +  
Sbjct: 1   MTPRNSIRLLLVDDHFVVRSGLAMLLAQQDDFAVVAEA-DDAEQAVAHYRQHRPDVTLMD 59

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
                     G+  L  +  +FP  R +++   D++  +  +L    + G L K+     
Sbjct: 60  VRMPG---ASGIEALQRIRGEFPDARVIMLTTYDLDEDVFRALEAGAV-GYLLKSVRHAE 115

Query: 123 FHQELFLSLNGVRQATDRLNNQWYINQSR-TLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               +     G R     L  +      R  LSP E E L  ++RG+S  +I   L    
Sbjct: 116 LFAAVRKVHAGERCVPQSLETRCKNGALRSRLSPREVETLDLLARGFSNREIGSALGVTE 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +T +AH   ++ KL  +  A  ++AA     +R
Sbjct: 176 RTAKAHVQAILVKLEAADRAEAVDAAYKRGLLR 208


>UniRef50_A9B4P1 Two component transcriptional regulator, LuxR family n=11
           Tax=Bacteria RepID=A9B4P1_HERA2
          Length = 257

 Score =  209 bits (532), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 71/232 (30%), Gaps = 28/232 (12%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V +++   +   G+                 +S E     +S      V+   +     
Sbjct: 6   KVLMVDDHPLFRQGVRWALSSERDIKIIGE-GSSAEEGLVLISEHEPDVVLTDLNLPNM- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +GL     +  ++P    ++++  + +     +L         SK  + +     L  
Sbjct: 64  --DGLEFTRTIRRQYPNIGVVMLSVYESDEHAFNALRAGAAAYY-SKEISPKTLATVLRR 120

Query: 130 SLNGVRQATDRLNNQWYINQ-----------------------SRTLSPTEREILRFMSR 166
              G     D +     +                            LS  E E+L  ++ 
Sbjct: 121 VARGEYVINDVMFEDPRVADRILTQFRGLQTGIVAEPDLDISLFSPLSDREIEVLEHIAS 180

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218
           G +   IA+ LK + +T++ H  +++ KL ++     +  A     +    T
Sbjct: 181 GATNKDIADALKISTQTVKNHISSILRKLSLNDRTQAVLYALRRGWIETPAT 232


>UniRef50_Q12FM5 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderiales RepID=Q12FM5_POLSJ
          Length = 224

 Score =  209 bits (532), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 82/219 (37%), Gaps = 13/219 (5%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           R +K  + +++   +   G+                 +  E     ++  + A  I   S
Sbjct: 10  RQEKTRIMMVDDHPLVREGMARFLNLQGDLDLCCEAGS-VEEALAVVADCNPALAIIDIS 68

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAST----- 119
                   GL  +  L  ++P    L I+  D       +L       ++ K +T     
Sbjct: 69  LNGE---SGLELIKTLRRRYPGLALLAISMHDESVFAERALRAGANGYLMKKEATGNILL 125

Query: 120 --LEIFHQELFLSLNGVRQATDRLN--NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               +   +++LS     + + RL        +    LS  E EIL  +  G+   Q+A+
Sbjct: 126 AVRRVLAGDIYLSAAMHSRLSQRLLAPQAGAPSPIAGLSEREFEILHLLGLGFGTRQVAD 185

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +L R+IKTI  H+ ++  KL + S A L+  A   L  R
Sbjct: 186 KLNRSIKTIETHRASLKEKLQLKSGADLVRFAIQWLEDR 224


>UniRef50_Q1LE49 Two component transcriptional regulator, LuxR family n=5
           Tax=Burkholderiaceae RepID=Q1LE49_RALME
          Length = 264

 Score =  209 bits (532), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 84/216 (38%), Gaps = 17/216 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
           +V ++E   +   G+ S+     G          +E+ Q A+S      ++   S     
Sbjct: 6   SVLIVEDHNLLRAGLRSMLSAQMGYHVAGEARDGREACQLAISLC-PDLILMDLSLPGM- 63

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+  +  +  + P  R + ++    +  +  +L    +DG + K ++ +     + +
Sbjct: 64  --NGIDAIAAIKRRSPGIRIIALSVHQNDEYVREALRAG-VDGYVLKDTSFDDLVTAMRV 120

Query: 130 SLNGVRQATDRLNNQW------------YINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            L G +  +  L                       L+  ER +L+ ++ G S  Q+   +
Sbjct: 121 VLLGKKHLSPELYGNLVESYVSGHEMSTAKTGWDLLTARERSVLKLVAEGRSNRQVGIYM 180

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
             + KTI  ++ ++M KLG+++   L+  A  +  +
Sbjct: 181 NLSPKTIEKYRASLMRKLGITNLTELVLIAISMGLI 216


>UniRef50_A1ASJ5 Two component transcriptional regulator, LuxR family n=2
           Tax=Desulfuromonadales RepID=A1ASJ5_PELPD
          Length = 208

 Score =  209 bits (532), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 74/207 (35%), Gaps = 10/207 (4%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + + +   +   G+  +    +G          +++       +    V+   +     
Sbjct: 4   RILIADDHAIVREGLTMILES-SGMIVAGEARDGRDALSQT-EVLRPDVVVMDIAMPE-- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+     +  + P  + +V++  +    +  ++        L K S        +  
Sbjct: 60  -LNGIDATRMIHGRLPEVKVIVLSMHNTREHVFRAMQAGARA-YLLKESAGSGLVDAVRA 117

Query: 130 SLNGVRQATDRLNNQWY----INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
            + G     + ++         +   +LS  ERE+++ +  G +  +IAE L  + K+I 
Sbjct: 118 VIRGECYFGEGVDAPQAVAGFKSPLDSLSLREREVIQLVVEGRTSAEIAELLSLSPKSIE 177

Query: 186 AHKFNVMSKLGVSSDAGLLEAADILLC 212
            ++  +M KLGV +   L++ A     
Sbjct: 178 TYRSRLMVKLGVGNIPALVKFALQHGI 204


>UniRef50_D2BGT0 DNA-binding response regulator, LuxR family n=5 Tax=Dehalococcoides
           RepID=D2BGT0_DEHSV
          Length = 232

 Score =  208 bits (531), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 17/211 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + K  V + +   +   G+  L  +             QE+  D +++     V+     
Sbjct: 1   MAKTKVLIADDHAVLREGMSRLLSQEKDIEVVGEAGDGQEA-VDMVAQFKPDVVLMDIVM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
            R     G+     +    P T  L++        ++G L      G L K++  +    
Sbjct: 60  PR---LTGVEATKLIKKNNPSTCILILTAYSDIRYILGLLEAGA-SGYLLKSAKSDEIVG 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR------------TLSPTEREILRFMSRGYSMTQI 173
            +     G          +                    LSP E EIL+  S+G S  +I
Sbjct: 116 AIRAIKAGESVLDSIATRKLLERVVNVSKESDEDKVRGQLSPREVEILQLASKGLSNREI 175

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLL 204
           A++L  +++T++AH  N+ +K+  S     +
Sbjct: 176 ADKLTLSMRTVKAHLSNIFNKMRCSCRTEAI 206


>UniRef50_A2SLK8 Two component transcriptional regulator, LuxR family n=3
           Tax=Burkholderiales RepID=A2SLK8_METPP
          Length = 226

 Score =  208 bits (531), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 77/227 (33%), Gaps = 26/227 (11%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQD----AMSRISFAAVIFSFS 64
             V + +  V+   GI+ +                 ++       A +      V+   +
Sbjct: 2   IRVVICDDHVIVRQGIKQILADAGDIALAGEAGNGPDAMTLVRAGAAAGTPPDVVLLDIA 61

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                +R+GL  L  L  +FPR   L+++        + SL      G L+K++  E   
Sbjct: 62  MP---QRDGLDVLKSLKAEFPRLPVLMLSTYPDRQYAVRSLKLGAA-GYLNKSADSEQMI 117

Query: 125 QELFLSLNGVRQATDRLNNQWY------------------INQSRTLSPTEREILRFMSR 166
             +     G    T  +  Q                          LS  E ++   ++ 
Sbjct: 118 DAIRRVAQGKLFITPSVAEQLAGAVGAGIGSRKGGVGDDEAPLHERLSHREYQVFGLLAA 177

Query: 167 GYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           G S+ +IAEQL  +  T+  ++  ++ K GV +D  L   A     M
Sbjct: 178 GKSVGEIAEQLVLSSNTVSTYRARILEKTGVRNDVELALYAVRQELM 224


>UniRef50_Q2W7M4 Response regulator n=3 Tax=Magnetospirillum RepID=Q2W7M4_MAGSA
          Length = 209

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 77/212 (36%), Gaps = 13/212 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + + E   +   G+ +L      +   +      +   +    ++   V+   S     
Sbjct: 4   RILIAEDQQLVRQGLVALLAV--DDVTIVGEAEDGKGAIEMARTLAPDVVLMDLSMPE-- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
             +G+     +    P+ R LV+   + E R+  +L+       L K    E     +  
Sbjct: 60  -LDGVEATRRIKQVAPQVRVLVLTVANCERRVAEALAAGADGYALKKLGHGE-LMAAINA 117

Query: 130 SLNGVRQATDRLNNQWYINQSR-------TLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
              G       L+                +L+  ERE+L+ ++RG+   +IA++L   IK
Sbjct: 118 VCAGKTYLGPGLSEDLVKEYLEGSDMGGGSLTAREREVLQLIARGHKNREIADELGIAIK 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           T+  H+  +M KL + + A L   A     + 
Sbjct: 178 TVETHRTKIMQKLDLHNSAELAAYAIRRGLIE 209


>UniRef50_C1RMQ2 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=2 Tax=Actinomycetales
           RepID=C1RMQ2_9CELL
          Length = 254

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 77/233 (33%), Gaps = 22/233 (9%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               V +++   +   GI ++ R   G       +    + + A  R+     +      
Sbjct: 8   SATTVLVVDDQPLIRQGIRAVLRGQPGVEVVGEAHDGHSAVRTA-RRLRPDVTLMDVQMP 66

Query: 67  RSERREGLSCLTELAIKF-PRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH- 124
                +G+     +     P T  +V+   D +  +  +L      G++ K +       
Sbjct: 67  GM---DGVEATRVICADDDPPTSVVVLTMYDQDEHVFEALRAGA-RGLVLKDAPTSELVA 122

Query: 125 -------QELFLSLNGVRQATDRLNNQW-----YINQSRTLSPTEREILRFMSRGYSMTQ 172
                   +  LS +  R+  +    +        +    L+  ER++ R + +G S  +
Sbjct: 123 AIHAAAAGDSLLSPSVTRRLIEEFARRPTVRMEATDGPAELTARERDVFRLLVQGLSTAE 182

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM---RHCETSNVL 222
            AE+L     T+++H  ++  KLGV      +  A     +           +
Sbjct: 183 AAERLTLGDSTVKSHVQSLYRKLGVRDRVQAVIYAYEHGLVDRTSPPPGGGTV 235


>UniRef50_Q89IF1 Two-component response regulator n=2 Tax=Bradyrhizobium
           RepID=Q89IF1_BRAJA
          Length = 217

 Score =  208 bits (531), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 12/214 (5%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M        +V L++   +   G   +               +      A        V+
Sbjct: 1   MSEVAATGISVLLVDDHPIVRQGYRRVLESQGDLHVVAEA-DNAADAYGAFKAHDPDVVV 59

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              S        GL  +  +  + PR R LV    +    +  + S     G ++K+S  
Sbjct: 60  LDISMPG---ASGLEAIRNIRARSPRARILVFTMHNEAVLVKAAFSAGA-SGFVTKSSEP 115

Query: 121 EIFHQELFLSLNGVRQATDRLNNQWYINQS-------RTLSPTEREILRFMSRGYSMTQI 173
                 +     G R  +D + +    +           L   E EILR  + G +  QI
Sbjct: 116 SAVVNAIRSVARGERAMSDDIAHILADDSLSPTGSVLDQLGEREIEILRQFAGGATTEQI 175

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAA 207
           A  L  ++KT++ + + + +K G  +DA L+  A
Sbjct: 176 ATHLNLSVKTVQNYHYLIKTKTGARTDAQLVRLA 209


>UniRef50_Q9RU37 DNA-binding response regulator n=3 Tax=Deinococci
           RepID=Q9RU37_DEIRA
          Length = 225

 Score =  208 bits (530), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 77/216 (35%), Gaps = 10/216 (4%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
                 V L++   +   G+        G          +E+ Q+A  R+    V+    
Sbjct: 10  TTPTVRVLLVDDHAVVRQGLRLFLGLDEGIEVVGEAANGEEALQEA-ERLRPEVVVMDLM 68

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                  +G++   EL  + P T  + +     E ++ G++    +  +L K ++ +   
Sbjct: 69  MP---VMDGITATRELRRRLPDTEVIALTSTLEENKVNGAIEAGAISYML-KDASSDTLA 124

Query: 125 QELFLSLNGVRQATDRLNNQW-----YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
             +  +  G  +       +            +L+P E  +L+ ++RG S   IA +   
Sbjct: 125 DAIHAAARGEVRLHPEAARRLVRDFRSPEMRESLTPKETAVLQLLARGQSNKDIAAEQGV 184

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +  T++ H   ++SKLG+ S       A        
Sbjct: 185 SEATVKTHVSRLLSKLGLDSRTQAALYALKYGIASL 220


>UniRef50_C3JVF4 Two component transcriptional regulator, LuxR family n=2
           Tax=Rhodococcus erythropolis RepID=C3JVF4_RHOER
          Length = 220

 Score =  208 bits (530), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 78/216 (36%), Gaps = 20/216 (9%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
            +V + +   +   G E             H  T  E+++  +  +    V+        
Sbjct: 2   IDVLIADDQQVVRQGFELFLSGHPEIRVVGHAKTGVEAYEQ-VRALRPDVVLMDIRMPHG 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL+   E+  +FP TR +VI   D++  +  +L      G L K +  E     + 
Sbjct: 61  ---DGLTATREVLAEFPGTRVIVITTFDLDEYVFEALDSGAA-GFLLKDADPEELSSAVL 116

Query: 129 LSLNGVRQATDRLNNQWY---------------INQSRTLSPTEREILRFMSRGYSMTQI 173
               G    + RL ++                       LS  E ++++ +S+G     I
Sbjct: 117 TVAEGGSVLSPRLTSRLIVEFARRKPAPMSTARSGSDHGLSAREMDVVQLLSQGLGNNDI 176

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           A+ L     T+++H  N+  KL V +   ++  A  
Sbjct: 177 ADSLSLEQSTVKSHISNICKKLQVRTRVQIVIWAYR 212


>UniRef50_A1WT06 Two component transcriptional regulator, LuxR family n=1
           Tax=Halorhodospira halophila SL1 RepID=A1WT06_HALHL
          Length = 216

 Score =  208 bits (530), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 13/214 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +   +    I+ + R         H   + E    A+       V+        
Sbjct: 2   IRVVLADDHRLIRQAIDGMLRDIPDIQIVAHA-ENAEHAVAAVREQEPDVVLMDLQMPGM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  +  L    P+   + +           +L      G + K +  +   + + 
Sbjct: 61  G---GVEAIRRLYRSHPKVGVIALTVYQSGPYPAHALRAGA-KGYVHKGADRDELIEAIR 116

Query: 129 LSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G R     +     +N            L+P E E+L  +  G   T IA+ L  +
Sbjct: 117 SVYLGRRYICHEVARHVALNSLDGTGESPFDHLTPREFEVLMRILNGQRGTSIAKDLCLS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            KT+  ++  +  +LGV +DA L   A     + 
Sbjct: 177 PKTVSTYRSRIFERLGVRNDAQLTRIAIDYGLLE 210


>UniRef50_A0M4P6 Two-component system response regulator n=5 Tax=Flavobacteriales
           RepID=A0M4P6_GRAFK
          Length = 205

 Score =  207 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 8/204 (3%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + E       GI+  F       +      + +   +   R     +I        
Sbjct: 2   IRLVIAEDHTALIDGIKVFFEYEEDIEFV-GFANNGQELIELTRRKKPNLIITDIRMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+    E+  +FP  + +  +  D +  +   L      G + K S+L+     + 
Sbjct: 59  -VMDGIQATKEILEEFPNIKIIAFSMFDQDKAVQQMLEAGA-SGYILKNSSLKELLYAIR 116

Query: 129 LSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIR 185
               G       +              L+  +REIL+ + +G +  +IA+QL     T+ 
Sbjct: 117 KVHEGEHYYDPNITVKQKSVSPKSKAVLTGRQREILKLIGQGRTNQEIADQLFIGKTTVE 176

Query: 186 AHKFNVMSKLGVSSDAGLLEAADI 209
            H+ N++ KLG+     LL  A  
Sbjct: 177 THRKNMIRKLGLQGAGELLRYALE 200


>UniRef50_Q15T22 Two component transcriptional regulator, LuxR family n=4
           Tax=Alteromonadales RepID=Q15T22_PSEA6
          Length = 214

 Score =  207 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 13/213 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L++   +   GI  +     G    +   T+ E       + +   V+   S    
Sbjct: 2   IKILLVDDHELVRTGIRRILEDVQGF-VVVGEATTGEEAVKFCRKNAPDLVLMDMSMPGI 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL    ++      TR +V++           +      G L+K S  +     + 
Sbjct: 61  G---GLEATKQILRFSENTRVIVLSVHKENPIPAKVMRMGAF-GYLTKDSDPKEMELAIR 116

Query: 129 LSLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G +  +  +  Q           N   +LS  E EI   +++G  +  IA+ L  +
Sbjct: 117 KVAAGQKYVSPDIAQQIAIGALDFSDGNPFESLSERELEITLMLTKGSKVPDIAKFLNIS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            KT+  H++ +  KL VS+D  L   A     +
Sbjct: 177 AKTVNTHRYRMFEKLNVSTDVELTHLALRHKLI 209


>UniRef50_C6W2Z0 Two component transcriptional regulator, LuxR family n=1
           Tax=Dyadobacter fermentans DSM 18053 RepID=C6W2Z0_DYAFD
          Length = 205

 Score =  207 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 82/207 (39%), Gaps = 8/207 (3%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + +++   +   G++SL     G      T T+       +            +     
Sbjct: 4   RILIVDDHPLVLEGLKSLLADAEGVQVV-GTATNAIEAIAFLKGNEVDIAFLDINLP--- 59

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+    ++  +FP  + L ++  +  A +   +      G L K+S  E   + +  
Sbjct: 60  DISGIDLCKKVKDQFPEVKTLALSTFNERAYVSRMIQNGA-SGYLIKSSGKEDILEAIAQ 118

Query: 130 SLNGVRQATDRLNNQWYINQSRT---LSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
              G      + +        +T   L+  E+E+L  ++ G +  QIAEQL  ++ T+ +
Sbjct: 119 VQAGGYFMNVQFDQVTPATAPKTVPFLTRREKEVLVLIAEGLTNPQIAEQLFISVTTVNS 178

Query: 187 HKFNVMSKLGVSSDAGLLEAADILLCM 213
           H+ N++ K  VS+ A L++ A  L  +
Sbjct: 179 HRQNLLIKFEVSNTASLIKLAAGLGLI 205


>UniRef50_C4DI56 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Stackebrandtia
           nassauensis DSM 44728 RepID=C4DI56_9ACTO
          Length = 235

 Score =  207 bits (529), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 8/214 (3%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
           +   V + +   +   G+++                  E+    ++      V+   +  
Sbjct: 3   EPIRVLVADDHPIVRQGLKTFLDIQPDLSVVAEARDGDEAL-ALIAAHEPDVVLLDLNMP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
            S   +G   LT LA    R + +V+       R+  +++     G L K    +   Q 
Sbjct: 62  GS---DGAKVLTRLAASDHRAKVIVLTSVTEAVRVTEAVAAGAA-GFLYKDIDPDSLAQA 117

Query: 127 LFLSLNGVRQATDRL---NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
           +    +G                      L+  ERE+L  ++ G S  +IA+QL    KT
Sbjct: 118 IRSVADGQVIFAREAVTAMTAPAPGPVAALTAREREVLALVAAGRSNREIAKQLSVAEKT 177

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           ++ H  ++  KLGV+        A       H E
Sbjct: 178 VKTHLSSLFRKLGVADRTQAALYAVTHGMAGHTE 211


>UniRef50_C6BTX3 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfovibrio salexigens DSM 2638 RepID=C6BTX3_DESAD
          Length = 217

 Score =  207 bits (528), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 16/218 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +  IG+ S    F            QE+  +  + +S   ++        
Sbjct: 5   IKVLLVDDHDIVRIGVRSFLGSFDDIKVVGEAANGQEA-VEMTAELSPDIILMDMLMP-- 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+  + E+  +    R + +     + +L  ++    + G L K ST +   + + 
Sbjct: 62  -VMDGIQAIREIRDRKLPGRIIALTSFATDDKLFPAIKAGAM-GYLLKDSTPDELLEAIR 119

Query: 129 LSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177
               G       +  +                   L+P E + L+ +++G S   IAE++
Sbjct: 120 RVHRGEPSLAPDIARKVLSELSQPGEDSETPTPDPLTPRELDTLKLVAKGKSNKAIAEEM 179

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
             +  T+R H  +++SKL +++       A        
Sbjct: 180 FVSEATVRTHMTSILSKLHLANRVEATLYALREGIASL 217


>UniRef50_B3RA82 Response regulator protein; Response regulator receiver domain, HTH
           LuxR domain; higly similar to B. subtilis
           Transcriptional regulatory protein degU (Protease
           production enhancer protein) n=1 Tax=Cupriavidus
           taiwanensis RepID=B3RA82_CUPTR
          Length = 223

 Score =  207 bits (528), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 70/214 (32%), Gaps = 10/214 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++       G+                 +  E       R +   V+        
Sbjct: 5   LRVLLVDDHPFVLDGVRLRLEATGEMTVIGQAAS-VEEAIVLAGRHAPDLVVSDIHMP-- 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL      A +FP  R + ++       +  +     +   + K +        + 
Sbjct: 62  -DANGLQLAARFAEQFPSVRVIALSMHKDPEYVRRAF-ALGVAAYVLKEAPAHELVTAIR 119

Query: 129 LSLNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKT 183
               G       L       +   +  R L+P E  +L+ ++ G S  +IAE+L  +++T
Sbjct: 120 TVAAGGTYLNAELQAFLHTDEPPPSSRRALTPKEATVLKLLAEGRSNKEIAERLGTSVRT 179

Query: 184 IRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           +  H+ ++  KL V   A L++ A     +   E
Sbjct: 180 VETHRLHLRRKLRVGGRAELVKYAVHFSDLHPIE 213


>UniRef50_A4XNE1 Two component transcriptional regulator, LuxR family n=2
           Tax=Pseudomonadaceae RepID=A4XNE1_PSEMY
          Length = 210

 Score =  207 bits (528), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 79/201 (39%), Gaps = 7/201 (3%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             +ALI+   +   GI +L              +  E+F D + R     ++        
Sbjct: 6   IRIALIDDHALVREGIRALLEVLPHFQVVGEAGSGAEAF-DLLQRTPVDILLMDV---GL 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL    +L  ++P  + L+++  D +  +  SL      G + K +        + 
Sbjct: 62  RDINGLELTRQLRERYPAIKVLMLSMYDNQEYVSSSL-AVGASGYVLKEAPSREIVAAIE 120

Query: 129 LSLNGVRQATDRLNNQW--YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
               G    +  +  +          L+P ERE+L  +++G +   +A  L+ +++T+  
Sbjct: 121 AIAAGGSFYSGDIARKLVKPAPSEDELTPREREVLLMLAQGLNNKVMARTLQISVRTVET 180

Query: 187 HKFNVMSKLGVSSDAGLLEAA 207
           H+ ++  KL +   A LL+ A
Sbjct: 181 HRLSIRRKLAIDKPADLLKHA 201


>UniRef50_B8ET67 Two component transcriptional regulator, LuxR family n=12
           Tax=Proteobacteria RepID=B8ET67_METSB
          Length = 223

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + L++   +   G  +L ++              E+++    ++    VI   +     
Sbjct: 6   TILLVDDHAIVREGYRALLQQQPRLKVVAEAGDGAEAYR-LFKQVKPDLVIMDLTMPGLG 64

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G+  +  +    P  R LV       A  + ++      G ++K+S  E   +  F 
Sbjct: 65  ---GVEAVKRIRQWDPAARILVFTMHQNAAFAVQAIRAGA-KGYVTKSSPPEALIRGAFD 120

Query: 130 SLNGVRQATDRLNNQWY-------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            L G    +  ++++            +  L+P E EILR +    S   IA  L  + K
Sbjct: 121 VLQGRIALSADIDHELALSRVTETPTATDVLTPREFEILRLLLAEKSTEAIAAILGLSPK 180

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           T+   ++ + +KLGV+SD  L+  A     + 
Sbjct: 181 TVANTRYLIKAKLGVASDIELVLVALRQGILG 212


>UniRef50_UPI00017452CB response regulator with a HTH DNA-binding domain n=1
           Tax=Verrucomicrobium spinosum DSM 4136
           RepID=UPI00017452CB
          Length = 235

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 77/214 (35%), Gaps = 16/214 (7%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K+ +A ++   M   G++ L            T ++ +     + +     +    S   
Sbjct: 18  KKKIAFVDDHTMLRDGLQKLVESQPDL-CCYWTASNTQDALQQLEQGKPDMLAVDISLPG 76

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
              R GL  + +     P    LVI+  D        L      G + K +      Q +
Sbjct: 77  ---RNGLELIKDALALHPDLPILVISMHDESFYAQRVLKAGA-RGYVMKDAESTTLLQAI 132

Query: 128 FLSLNGVRQATDRLNNQ-----------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
              L G R  +  ++ Q             ++  + LS  E E+ + +S G S  QI + 
Sbjct: 133 RNVLEGGRYVSPAMSAQIMEAFSGRGAARPVDGVQRLSDREFEVFQLISEGKSTQQIGDA 192

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
           L  ++KT+  H+ ++  KL +   A +L  A   
Sbjct: 193 LNISVKTVEVHRAHIREKLKLEDGASVLRYAVRW 226


>UniRef50_A5D0L7 Response regulator n=1 Tax=Pelotomaculum thermopropionicum SI
           RepID=A5D0L7_PELTS
          Length = 223

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 84/228 (36%), Gaps = 18/228 (7%)

Query: 1   MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI 60
           M      +  + L++   +    +  LF         +   ++ E    A++R+    ++
Sbjct: 1   MNEFLTSEIQLLLVDDDPLVRRSLRMLFELHD--INVVGEASNGEEALKAIARLKPTMIL 58

Query: 61  FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL 120
              +     + +G+  L  +   +P  + +++   +   +++ ++        + K S  
Sbjct: 59  MDVNMP---KMDGIQALKAIKTNYPDIQVIILTVHNQHEKVVQAIRDG-CSAYVLKDSPP 114

Query: 121 EIFHQELFLSLNGVRQATDRLNN------------QWYINQSRTLSPTEREILRFMSRGY 168
           E   + +     G       + N            + +      L+  E+E+L+ +  G 
Sbjct: 115 EQLIEVVESVAEGRYFVDTSIANELLVNLVQGTPRRQHPKNLPLLTLREKEVLQLIVNGL 174

Query: 169 SMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           S  +IA +L   ++T++AH  +++ KL V+        A     ++  
Sbjct: 175 SNKEIAGKLNITLRTVKAHVSSILMKLNVNDRTQAAVLAIQENLVQPP 222


>UniRef50_A1RC88 Two-component system response regulator n=8 Tax=Actinomycetales
           RepID=A1RC88_ARTAT
          Length = 218

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 78/219 (35%), Gaps = 13/219 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRI----SFAAVIF 61
           +    V L++   +   G+ ++   F G            +  +             V+ 
Sbjct: 1   MSDIRVLLVDDHPVVRAGLRAMLADFPGVTVVAEASEGDAALVELSKLHTLGEPVDLVLM 60

Query: 62  SFSAMRSERREGLSCLTELAIK---FPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
                     +G++   ++       P    L++   D +A ++ ++      G + K +
Sbjct: 61  DLQM--GSGMDGVTATEKIKAGEGGNPPPPVLILTTYDTDADILAAVEAGA-SGYMLKDA 117

Query: 119 TLEIFHQELFLSLNGVRQATDRLNNQW---YINQSRTLSPTEREILRFMSRGYSMTQIAE 175
             E   Q +  +  G       +  +      N S  LS  E ++L  ++ G S   +A+
Sbjct: 118 PPEQIRQAVLSAAAGQTALAPEVAARLMGRIRNPSPALSGREVQLLELLATGMSNRAMAK 177

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           QL  +  T++ H  ++ SKLGV +    +  A     +R
Sbjct: 178 QLFISEATVKTHLVHIYSKLGVDNRTAAIAVATQRRIIR 216


>UniRef50_C7I0E4 Two component transcriptional regulator, LuxR family n=2
           Tax=Thiomonas intermedia K12 RepID=C7I0E4_THIIN
          Length = 226

 Score =  207 bits (527), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 82/222 (36%), Gaps = 16/222 (7%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           + + + +  V +I+   +    +                         ++   S++ V+ 
Sbjct: 12  QETPLDELRVLIIDDHALLGESLARFLGSN-DMQAVW--CGDLVEAMQSIRDRSWSVVLL 68

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
             S  R     GL  L  + +  P    L+++    +   + +L      G L+K  + +
Sbjct: 69  DLSMPRG---NGLDLLKRIKLMHPDLPVLILSMHPEQQFALRALR-GGAAGYLTKGCSPD 124

Query: 122 IFHQELFLSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQ 172
           +  + +   ++G R  T  +  Q                 LS  E ++   +  G S+ Q
Sbjct: 125 VLVEAIQKVVHGGRYLTPGVAEQLANYMNEGEAAEEPHARLSDREMQVFMRLVEGKSVNQ 184

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +A++L  + KT+  HK  +M KL + +DA L+  A     + 
Sbjct: 185 VADELHISCKTVSTHKTRLMHKLALDNDADLVRYAMHQGIVS 226


>UniRef50_Q8YV43 Two-component response regulator n=7 Tax=Bacteria
           RepID=Q8YV43_ANASP
          Length = 209

 Score =  206 bits (526), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 6/206 (2%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+ ++  +            + E              +        
Sbjct: 7   IRVLIADDHAIFRQGLATIINRDPEMQVVA-QAENGEQVIALFEEHQPDVTLMDLRMPE- 64

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              EG++ ++ +       R +V+   D +  +   L      G L K +  +     + 
Sbjct: 65  --VEGVAAISAICATAKSARIIVLTTYDSDEDIYRGLQAGA-KGYLLKETEPDELLNAIR 121

Query: 129 LSLNGVRQATDRLNNQWYIN-QSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAH 187
               G +     +  +      +  LS  E E+LR +++G S   IA+ L     T+++H
Sbjct: 122 TVHRGHKYIPPDVGAKLVQRLSNPELSERELEVLRSLAQGMSNADIADALSIGEGTVKSH 181

Query: 188 KFNVMSKLGVSSDAGLLEAADILLCM 213
              +++KL VS     +  A     +
Sbjct: 182 VNRILNKLDVSDRTQAVIVAVKRGIV 207


>UniRef50_C6WV69 Two component transcriptional regulator, LuxR family n=2
           Tax=Betaproteobacteria RepID=C6WV69_METML
          Length = 216

 Score =  206 bits (525), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 13/220 (5%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFS 62
            S+  K  V + +   +   G++ +  +            +        S+     ++  
Sbjct: 2   MSKKPKIKVIIADDHAILRAGLKQILSETEDILVIAEA-QNANEAIKLGSQPEADVLLLD 60

Query: 63  FSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEI 122
            S      R G+  L  +  +      L+++    +   I +L      G L K S    
Sbjct: 61  ISLP---DRSGMEALKYIKRENSHIAVLMLSMHREDEYAIRALKSGAA-GYLCKQSASSE 116

Query: 123 FHQELFLSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIA 174
               +     G +  T  +                   LS  E +    ++ G S+T +A
Sbjct: 117 LVNAIQTVARGKKYITPEVAEILANQIGRDDQKAPHELLSDREYQTFIMIASGLSVTDVA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            +L  ++KT+  ++  ++ K+ +  +A L   A     + 
Sbjct: 177 NKLSLSVKTVSMYRARLLEKMQLKHNAELTHYAFKHNLVS 216


>UniRef50_A1VT42 Two component transcriptional regulator, LuxR family n=7
           Tax=cellular organisms RepID=A1VT42_POLNA
          Length = 224

 Score =  206 bits (525), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQES---FQDAMSRISFAAVIFSFSA 65
             + L++       G+                 +  E+     D     +   V+   S 
Sbjct: 5   IRLILVDDHPFVRDGVRMRLEATDDIRVVGEAGSVDEAMQLATDLGDERAPHIVLTDISM 64

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+        +FP    LV++  +    +  ++      G + K +  +    
Sbjct: 65  RGM---SGIELAALFQHRFPGIDVLVLSMHNNLEYVKRAIESGA-KGYVLKDAPAQELVN 120

Query: 126 ELFLSLNGVRQATDRLNN-----QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +     G    +  L       +     +  L+P E   L +++ GYS  QIA +L  +
Sbjct: 121 AIRAVHAGETFFSPELQQYTEGFRASSGGNSPLTPKESATLAWLACGYSNKQIARELSMS 180

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           ++T+  H+ N+  KL ++  A L++ A   + 
Sbjct: 181 VRTVETHRLNLRRKLRITGQAELVKYAIDHML 212


>UniRef50_Q67QY5 Two-component response regulator n=1 Tax=Symbiobacterium
           thermophilum RepID=Q67QY5_SYMTH
          Length = 218

 Score =  206 bits (525), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 82/222 (36%), Gaps = 18/222 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++  +M   G+ S+                QE+  + + ++    V+   +    
Sbjct: 1   MKVLIVDDHLMLRKGVLSVLSNT-DLEVIGEASNGQEAL-ELVPKLKPDLVLMDINMP-- 56

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+    +L   +P  + +++   +I+  L  ++     DG L K    E     L 
Sbjct: 57  -VLDGVEATRKLKQMYPDLKVVILTVSEIDKDLFEAIKAGA-DGYLLKNLGPEELVSSLR 114

Query: 129 LSLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +++G    +  +  +                  + LSP E E+LR  S G +  +IA +
Sbjct: 115 AAISGEAPISSVMAAKMLKEFRQPRANTTGKQPGQQLSPREIEVLRLASTGLTYKEIAAK 174

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218
           L     T++ H  +++ KL + + +  +  A          +
Sbjct: 175 LYVAESTVKNHMRHILEKLHLRNRSEAVGYAIRTGLAGEPPS 216


>UniRef50_B9E7V9 Two-component response regulator n=65 Tax=Staphylococcaceae
           RepID=B9E7V9_MACCJ
          Length = 210

 Score =  206 bits (525), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 9/214 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K+ ++ L++   +   G++ L    A           +E  +          +I     
Sbjct: 1   MKRMDIILVDDHHIVRQGMKFLLSTEASFNVIADFNNGRELLEHLDETQLPDLIIMDLVM 60

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+     +  K+P  + LV++    E  ++G +     DG   K S  +    
Sbjct: 61  PE---LNGIEATRRIKAKYPDVKVLVLSSFIDEEHVLGVMDAGA-DGYEMKDSEPKALIN 116

Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +     G +     +     +     +    LS  E E+L+ MS G +  +IAE+L  +
Sbjct: 117 TIKQIAAGEQIFHPDVMKVRKSGMNLAHLRNPLSKRELEVLKAMSEGLTNKEIAEKLFVS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            KT++ H  ++ +KL V               + 
Sbjct: 177 EKTVKTHVSHIFAKLEVGDRTQASMYGVKYKLIE 210


>UniRef50_A0NNP3 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Labrenzia aggregata IAM
           12614 RepID=A0NNP3_9RHOB
          Length = 205

 Score =  206 bits (525), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 12/209 (5%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSERR 71
            L +   +   GI +  +K A           +E+   A   +    ++   S       
Sbjct: 1   MLADDHELVRDGIRARLQKVADLEVVGEATNGREALTLAHD-LRPDVLLMDVSMP---VM 56

Query: 72  EGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFLSL 131
            GL   T++    P    L+++  D    + G +       +L   S  E     +    
Sbjct: 57  NGLEAATQMRKLLPEIAVLILSVYDNPEYVRGVVQAGARGYILKDISAAE-MITAITSVA 115

Query: 132 NGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           +G    +  +            +     L+  ER++L  ++RG    ++A++L  +++T+
Sbjct: 116 SGGYYFSSAVGPTLVGAGTSAPVEDPYGLTDRERQVLTAIARGQPNKEVAKELGISVRTV 175

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            +H+ N+  K+G  + A L + A  L  +
Sbjct: 176 ESHRLNLREKVGNKNAAQLYKVAQDLGLL 204


>UniRef50_C6W5G0 Two component transcriptional regulator, LuxR family n=2
           Tax=Flexibacteraceae RepID=C6W5G0_DYAFD
          Length = 219

 Score =  205 bits (524), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 78/224 (34%), Gaps = 20/224 (8%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    + + +   +   G  S+        + L     QE   D +   +   V      
Sbjct: 1   MSTLKLGIADDHELFRKGFISMLSGIPDFEFILEAGNGQE-LLDRLPANTPDIVFMDLQM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+        +FP  + +V++  + +  +I  L    + G L K ++ +   +
Sbjct: 60  P---VMDGIQATEAAFERFPNIKIIVVSMYNEDRFVIHMLEKG-VQGYLLKDTSPDEVEK 115

Query: 126 ELFLSLNGVRQATDRLNNQW---------------YINQSRTLSPTEREILRFMSRGYSM 170
            +           D ++                      +  LS  E+E+L+ +  G S 
Sbjct: 116 AIRRVHEEGFYYNDFVSKAMHRKMVNRQVNKHPFFPNACNVALSSREKEVLQLICDGLST 175

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           T+I ++L  +++T+  H+  V+ K G  S A  +  A     + 
Sbjct: 176 TEIGDKLFISVRTVEGHRLRVLEKTGTKSTAAAVAFAYKNQLLS 219


>UniRef50_A3Y699 Putative two component system response regulator n=1
           Tax=Marinomonas sp. MED121 RepID=A3Y699_9GAMM
          Length = 226

 Score =  205 bits (524), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 81/220 (36%), Gaps = 19/220 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + +++   +   G+  +    +            E+ + A   I    ++        
Sbjct: 3   IRIVIVDDQALVRSGLSMILDHQSDIEVVAECANGLEAIEAAKKYI-PDLILMDIRMPEM 61

Query: 69  ERREGLSCLTELAIKFP-RTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
              +GLS  + +      +TR ++++  D++  +  +L      G + K +  +     +
Sbjct: 62  ---DGLSATSAILGDLNIQTRIVILSTFDLDEYIYRALREGA-SGFILKDTPPDELVAAV 117

Query: 128 FLSLNGVRQATDRLNNQWY-------------INQSRTLSPTEREILRFMSRGYSMTQIA 174
            +   G    T  +  +                     L+  E+EIL+ ++ G++ ++IA
Sbjct: 118 HVVAQGGALLTPSITKKLIGAFAELKPSHTNVTGHIDRLTTREKEILKNLALGFNNSEIA 177

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
            +L     T++ H  +++SKL +   A  +  A     +R
Sbjct: 178 SRLFIGESTVKTHVSSLLSKLELRDRAQAVIFAYENGVIR 217


>UniRef50_C5V5K1 Two component transcriptional regulator, LuxR family n=1
           Tax=Gallionella ferruginea ES-2 RepID=C5V5K1_9PROT
          Length = 211

 Score =  205 bits (524), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 74/208 (35%), Gaps = 13/208 (6%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            + + +   +   G+  LF    G         + E     +       V+         
Sbjct: 4   RLIVTDDHELVRAGLLQLFEGAPGIEVVGEAV-NGEELMRKLQATQVDLVLLDLDMPGE- 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              G + +  +   +P    L+++  D    +  ++      G + K  + +   + +  
Sbjct: 62  --NGANLIERIRRHYPDLLILILSAHDEIKVVSRAVQAGA-SGYICKDCSPKTLLEAIHK 118

Query: 130 SLNGVRQATDRLNNQWY--------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
            +   +  +  +  +           N    LS  E+EI R +  G S   I+ QL  + 
Sbjct: 119 VVATGKYLSPLMAEELAYTSAIPQANNSLALLSSREQEIFRLLVEGLSNDDISRQLFISD 178

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +T+ AHK N+++KLG+ +   L+  +  
Sbjct: 179 RTVSAHKINLLNKLGLKNVVELVHYSIQ 206


>UniRef50_UPI00018507A5 two component LuxR family transcriptional regulator n=1
           Tax=Bacillus coahuilensis m4-4 RepID=UPI00018507A5
          Length = 212

 Score =  205 bits (524), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 75/211 (35%), Gaps = 19/211 (9%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K   V + +   +   G+ S+      N       + +E+ Q A   +    V+     
Sbjct: 1   MKSIRVLIADDHPLFRQGVSSVLANTPDNEVIAEAGSGEEAVQMAC-NLLPDLVLMDIQM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+    ++  K      ++I   + +  +  ++      G + K +  E   +
Sbjct: 60  P---DLNGIEATRKILSKCRDIYIIIITMFEDDTSVFSAMQAGA-RGYVLKDAEKEDILR 115

Query: 126 ELFLSLNGVRQATDRLNNQW--------------YINQSRTLSPTEREILRFMSRGYSMT 171
            +     G    +  + ++                      L+  E E+L  +S+G S +
Sbjct: 116 AVRAIAKGEVLFSSGVASRMIDYFAQGEVTQTVVASTLFPELTSRESEVLFLLSKGASNS 175

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAG 202
           ++AE L  + KT+  +  N+++KL VS    
Sbjct: 176 EVAETLGLSNKTVYNYVANILNKLQVSDRQE 206


>UniRef50_A1ZEE6 Two-component response regulator n=2 Tax=Microscilla marina ATCC
           23134 RepID=A1ZEE6_9SPHI
          Length = 213

 Score =  205 bits (524), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 75/212 (35%), Gaps = 15/212 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
               ++E   +   G++ L  K+A            +   +         V+   +    
Sbjct: 2   ITFYIVEDHTIVRQGLKQLLAKYAEMKVLAEFGVPDQIMDNLAKGERPDIVLCDINLPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL+   ++  K+P  + +++     E  ++ +      DG   K +        + 
Sbjct: 62  ---DGLALTEKIKQKYPDQKIIILTMHQKEFYVLKAFDAGA-DGYFHKDTEESELIMGIK 117

Query: 129 LSLNGVRQATDRLNN-----------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
              NG +     ++                    TL+  E+E+L  +  G    +I ++L
Sbjct: 118 KIYNGQKYFCQSVSQILINRLLDTKNSSGKTLLPTLTFREKEVLEQVVAGLGNREIGDKL 177

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
             + +T+  H+ N++ K G+ +   L++ A  
Sbjct: 178 CISTRTVENHRANILRKFGLKNTVELVKFAIE 209


>UniRef50_B8CZJ8 Two component transcriptional regulator, LuxR family n=1
           Tax=Halothermothrix orenii H 168 RepID=B8CZJ8_HALOH
          Length = 209

 Score =  205 bits (524), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 11/207 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++       G+++      G      T  + E     +++++    +        
Sbjct: 2   IQVYLVDDHPFVLQGLKAYLNTREGIEIV-GTSGNGEKAIKEIAKLNPEVAVVDLRLPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+    E+  K P T  ++++  + E  +I ++    L   + K S  E   + + 
Sbjct: 60  --LNGIEVTREIKKKNPGTEVIILSSFNKEDEVIEAIDAGALS-YVMKDSRPEKLVEAIK 116

Query: 129 LSLNGVRQATDRLNNQ------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            +  G    T  +  +          ++  L+P E+E+L  + RG S   IA+ L  +  
Sbjct: 117 AARRGEPVLTPGVAKKIMKRAARKGRKTEPLTPREKEVLACLVRGNSNRDIAKTLCISET 176

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADI 209
           T++ H  N++ KL V      +  A  
Sbjct: 177 TVKTHVSNILKKLDVKDRTQAVIKAIE 203


>UniRef50_C6DD36 Two component transcriptional regulator, LuxR family n=1
           Tax=Pectobacterium carotovorum subsp. carotovorum PC1
           RepID=C6DD36_PECCP
          Length = 218

 Score =  205 bits (524), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 10/213 (4%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
              NVAL++  ++   G   L              ++ +++   + +      +   +  
Sbjct: 9   TMINVALVDDHIVVRSGFAQLLALENDIQVVGQYASAAQAWPHLLKQ-PIDVAVIDIAMP 67

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 GLS LT L  + P+ R ++++  D  A +  +L      G L+K    E   Q 
Sbjct: 68  ---DESGLSLLTRLRQQRPQFRAIILSIYDTTAFVQSALDAGA-GGYLTKRCGPEELVQA 123

Query: 127 LFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
           + +  +G             + Q    +   L+P EREI   +  G S+  IAEQL+ + 
Sbjct: 124 VRVVSSGGIYLCADALHAIRHQQQPPKELLALTPREREIFSLLINGISVKSIAEQLELSH 183

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           KT+  H+ N++SKL   S   L+  A     + 
Sbjct: 184 KTVHVHRANILSKLQCESTVELVHFALQHQLLA 216


>UniRef50_B9XAM6 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacteria RepID=B9XAM6_9BACT
          Length = 209

 Score =  205 bits (523), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 6/207 (2%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           K  + + +   +  +G+ +L                 ++  +  ++ +    +       
Sbjct: 6   KIRILIADDHYVVRMGLIALVNTEPDMEVVAEAADGAQAL-ELFAKCNPDLALMDLRMP- 63

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
              + G+    E+  +F     L++   D +  +  +L      G + K+ST E     L
Sbjct: 64  --VKSGVQATLEIRNRFATACVLMLTAFDGDEDIHKALQAGA-QGYVLKSSTGEKLIPAL 120

Query: 128 FLSLNGVRQATDRLNNQWY-INQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
                G R     + N+    N    LSP E ++L  ++RG +  +IA+ L     T + 
Sbjct: 121 RAVAAGQRWIPKEVANRLALRNSFEQLSPREVQVLSELARGLANKEIADVLNITEHTTKD 180

Query: 187 HKFNVMSKLGVSSDAGLLEAADILLCM 213
           H  ++++KL V+     +  A     +
Sbjct: 181 HLKSILAKLRVADRTEAVTVALQRGII 207


>UniRef50_C0QJ84 Two-component response regulator protein n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QJ84_DESAH
          Length = 218

 Score =  205 bits (523), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 78/220 (35%), Gaps = 16/220 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + L++   +    ++    +              ++ +          VI   +  
Sbjct: 4   NPITILLVDDHDILRQSLKKALEEKPNVKVLQGACNGLDAVRLTEKHC-PNIVIMDINMP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+    ++  K P  + + ++    E  +   +      G L K S+LE  H  
Sbjct: 63  ---DLNGIEAAKQIISKNPDIKIIALSMLCDEFNVKSMIQAGA-KGFLLKTSSLEDLHTA 118

Query: 127 LFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQIAE 175
           + +  +G         N    +             + L+  ER +++ ++ GY+  +I+E
Sbjct: 119 ILMVASGKSYLCPEALNIMMEDIQTPGDTKLLCPLQRLTLRERGVIQLIAEGYTSQEISE 178

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +L  + +T+  H+ N M+KL + + AGL   A     +  
Sbjct: 179 KLNISKRTVDVHRTNTMNKLKIHTIAGLTRFAVKEGLITL 218


>UniRef50_C6VXD5 Two component transcriptional regulator, LuxR family n=1
           Tax=Dyadobacter fermentans DSM 18053 RepID=C6VXD5_DYAFD
          Length = 220

 Score =  205 bits (523), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 77/224 (34%), Gaps = 27/224 (12%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
              + +++   +   GI +L                 +   D + ++    ++   +  R
Sbjct: 2   PIRILVVDDHSVVRQGIITLLEDEEDLIIAGEASDG-DEVWDMVEKVKPDVILLDLTMPR 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                GL  + ++   FP  + LV +  +    ++ S       G L K ++ E   + +
Sbjct: 61  MP---GLEVIRQIVPVFPSAKILVFSMHNNTDYVLSSALNGA-SGYLEKDTSREEMLRAI 116

Query: 128 FLSLNGVRQATDRLNNQWYINQSRTL----------------------SPTEREILRFMS 165
                G        ++    N  + L                      +P E++IL+ ++
Sbjct: 117 RAIAKGDLYFPPYASSVIIKNLLKQLARVPDTRAAQEEVQEKSIWKIITPREQQILKCLT 176

Query: 166 RGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            G S   IAE+   +  T+   + ++M K  V + A L+  A  
Sbjct: 177 EGMSSKDIAEKFDISSNTVANQRASIMKKANVRNTAELISLAMK 220


>UniRef50_B6JD38 Two component transcriptional regulator, LuxR family n=1
           Tax=Oligotropha carboxidovorans OM5 RepID=B6JD38_OLICO
          Length = 210

 Score =  205 bits (523), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 75/210 (35%), Gaps = 14/210 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G+  +  +           T+ +     +       V+   S    
Sbjct: 2   TRIIIADDHTIFREGLRQILAEANDFTLVGEA-TNGDDLLVRLREAPCDIVLLDLSMPG- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G++ +          R +V++  +    ++ +L     DG ++K S  +     + 
Sbjct: 60  --ISGITLVRAAREIAGAHRIIVLSMHEEHQYVVEALKAGA-DGYVTKNSASDQLIAAIR 116

Query: 129 LSLNGVRQATDRLNNQWYIN---------QSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
               G    +   + +  +              L+  ERE+   +  G+ +++IA  L  
Sbjct: 117 KVSQGELFVSAAASQEAILREMRTSPTELPHTRLTRREREVFDMLVAGHKISRIARDLDL 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +IKT+  HK N+++K+   + A L+  A  
Sbjct: 177 SIKTVSTHKTNLLAKMDAETTADLVRYALR 206


>UniRef50_A5FAZ3 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacteroidetes RepID=A5FAZ3_FLAJ1
          Length = 219

 Score =  205 bits (523), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 83/216 (38%), Gaps = 20/216 (9%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +  V    GI+SL    A            ++  + ++      +I        
Sbjct: 5   IRVVLADDHVFVRDGIKSLLENEANIEVVGEAIDGADAL-EVVTATKPDLLIVDIRMP-- 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  + +L  +    + ++++  + E  ++ S+     DG L K S+ E F + L 
Sbjct: 62  -NLTGIEVVEKLRSENNNVKIIMLSMHESEEYVLKSIKAGA-DGYLLKGSSKEEFLKALH 119

Query: 129 LSLNGVRQATDRLNNQWYI---------NQSRTL------SPTEREILRFMSRGYSMTQI 173
              +G +  +  +++                +TL      +  E+EIL  +  G    +I
Sbjct: 120 AVSSGGKYFSGDISSILISQLTNSTASLEPKQTLGEEMMITKREKEILTLLLSGKGNKEI 179

Query: 174 AEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           AE L+ + +T   H+FN+M KL V +   L   A  
Sbjct: 180 AEALEISKRTAEVHRFNLMKKLKVKNLMELSNKAAE 215


>UniRef50_A1ZFU2 Transcriptional regulator, LuxR family n=1 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZFU2_9SPHI
          Length = 219

 Score =  205 bits (523), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 80/215 (37%), Gaps = 15/215 (6%)

Query: 3   HSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDA-MSRISFAAVIF 61
               +K  V + +   M   G+E+L +           Y    +F+   ++++     + 
Sbjct: 1   MQDKEKIKVIIADDHHMVLEGLEALIKVTNDIEVIGLAYNGHHAFKLLELNQLDVDIAVL 60

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
                    ++GL    ++  ++P  + L++   + E+ +   +  +   G + K     
Sbjct: 61  DVDMP---VQDGLETTRKIRTEYPNIKVLILTMHNNESYIKE-IIAAGASGYILKNRGAS 116

Query: 122 IFHQELFLSLNGVRQATDRL----------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171
                +     G    +  +          + +   N    L+  E+E+L  + +G +  
Sbjct: 117 ELVNAIRTIYAGEEYFSKAVTDTLIKSIQESKKAKPNPQVKLTKREKEVLALIGKGMTTK 176

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           +I++QL     T+  H+ N++ KL V +   L+  
Sbjct: 177 EISKQLFIADTTVETHRRNLIDKLEVKNSKELILY 211


>UniRef50_Q021D5 Two component transcriptional regulator, LuxR family n=2
           Tax=Acidobacteria RepID=Q021D5_SOLUE
          Length = 210

 Score =  205 bits (523), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 7/210 (3%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
              +V L++   +   G   +                 ++       +    V+  F+  
Sbjct: 4   APISVLLVDDHSLVRRGFRRMLEDDPAIVVVGEAEDGHQA-VQLAGELHPRVVVMDFAMP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G      +    P T  L+++     + +   L    + G L K +        
Sbjct: 63  SM---NGAVAARHILRTAPETAILILSMHAEASYVRTCLEAG-VRGYLLKNALDLEMVAA 118

Query: 127 LFLSLNGVRQATDRLNNQWYINQSRT--LSPTEREILRFMSRGYSMTQIAEQLKRNIKTI 184
           +     G +    RL      + +    L+  E E+L+ +  G S  +IA  L  +  T+
Sbjct: 119 VKQVAAGKQVLDRRLGALDLPSGAAPAGLTTRELEVLQLIVHGKSNKEIAAVLSLSANTV 178

Query: 185 RAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             H+ N+M  LG+ + A L+  A     + 
Sbjct: 179 AVHRANIMQTLGIHNTAELVVYAIRQGLVS 208


>UniRef50_C6C0G1 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfovibrio salexigens DSM 2638 RepID=C6C0G1_DESAD
          Length = 218

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V + +   +   G++++ +  +G    L    + E       R++    +   S     
Sbjct: 6   TVVIADDHALVREGLKTILKSQSGIS-VLGMAENGEEAVRLCRRLNPDVALMDLSMP--- 61

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
            + G+  + EL+ +  +T+ L +        +  +L      G + K S+ +     +  
Sbjct: 62  IKSGVQAIQELSGEG-KTKFLALTAHVEPDHIYSALDAGA-SGYVLKTSSSKELVMAIET 119

Query: 130 SLNGVRQATDRLNNQWYI-----------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            + G       ++ +              +   +L+  ERE+L+ +  GY   +IA+ L 
Sbjct: 120 VMQGKVYLAPDISAEVAKGFLQRDRSNSCDSLESLTEREREVLKQVLAGYKNREIADLLV 179

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            ++KT+  H+ N M KLG+ S A L   ++ L
Sbjct: 180 ISVKTVEKHRSNFMKKLGLRSKAELKAYSEEL 211


>UniRef50_C1TL62 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Dethiosulfovibrio
           peptidovorans DSM 11002 RepID=C1TL62_9BACT
          Length = 217

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 79/222 (35%), Gaps = 14/222 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++K  + LI+   +   G++ L         +       E     + R     V+     
Sbjct: 1   MEKIRMVLIDDHKLFRDGMKKLLEMEPDFSLEGEASDGIEGL-ALIKRSRPDVVLLDIGM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+  + EL      T+ + I   + E +L   LS   + G + K+S       
Sbjct: 60  P---NLDGIGLIRELRSTEQNTKFVAITAFNDERKLSE-LSSVGVHGFVLKSSGRTELLS 115

Query: 126 ELFLSLNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +     G      ++           Q   +    L+  E+E+L ++++G S  +I+ +
Sbjct: 116 AIRSVARGQCYVDPKVAGLLLGAFHKKQDEADMLCDLTDREKEVLFWLAQGLSNLEISAK 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218
           +  + KT++ H  +++ KL +         A  +      E 
Sbjct: 176 MNLSEKTVKNHVSHILKKLDLRDRTQAAILAWRVGIAESSEE 217


>UniRef50_A5FIE9 Two component transcriptional regulator, LuxR family n=1
           Tax=Flavobacterium johnsoniae UW101 RepID=A5FIE9_FLAJ1
          Length = 213

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 87/217 (40%), Gaps = 14/217 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           + + N+ + +   M   GI SL  +              E+  + + +     +I   S 
Sbjct: 1   MNQINLLIADDHTMFLQGIISLLEQEPNITIIDKAVNGIEAL-EIIKKGVVDFIILDISM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+     L  + P  + L+++       ++  L    ++G L K +  E   +
Sbjct: 60  PEM---DGIELSKILKKQHPNVKILIVSTHSN-VMIVSRLIRIGVNGYLLKNAAKEELLK 115

Query: 126 ELFLSLNGVRQATDRLNNQWYINQSR---------TLSPTEREILRFMSRGYSMTQIAEQ 176
            +    +G     + L  +   N S+          LS  E+EIL  ++  Y+  +IAE+
Sbjct: 116 AINTIASGENYFAEELEEKHLSNSSKIEKQVSNLTELSSREKEILVLIAHEYNTAEIAEK 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
              ++ T+  H+ N++SKL   + AGL++ A     +
Sbjct: 176 TFISLNTVNTHRRNLLSKLNAKNTAGLVKYAVENGLV 212


>UniRef50_Q2BNR9 DNA-binding response regulator, LuxR family protein n=2
           Tax=Neptuniibacter caesariensis RepID=Q2BNR9_9GAMM
          Length = 214

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 12/213 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G  SL          L      +++       S   VI   +    
Sbjct: 1   MKIVIADDHAVVRQGYASLLSAMLAPCEVLEAGNGDQAY-SLCQSDSPDVVIMDVNM--- 56

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
           +   G+     +  K P TR L  +  D    +  +L      G ++K+ T EI  + + 
Sbjct: 57  QGISGIEATRRILQKKPDTRILFFSMYDEIPVVTQALEAGA-KGYITKSCTPEILIEAVK 115

Query: 129 LSLNGVRQATDRLNNQWYINQSRT-------LSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G       L  +  +++          ++  E EI   +++G ++ +I+EQL  + 
Sbjct: 116 KVSAGQLYVEHELAMRLAVSRPEQKDKRLKEMTQREFEIFVMLAQGSNVKEISEQLCISS 175

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           KT+  +   + SKL + S A L+  A     ++
Sbjct: 176 KTVSNYTAILKSKLNIGSTAELVHLAIETGLVK 208


>UniRef50_B5EEC0 Two component transcriptional regulator, LuxR family n=2
           Tax=Geobacter RepID=B5EEC0_GEOBB
          Length = 216

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 76/218 (34%), Gaps = 13/218 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +  VM   G+ +L  +                 +  +  +    V+   S    
Sbjct: 3   IRIILADDHVMFREGMRALLEREEDMVVVAEAGDGVSVVEKTLENM-PDVVVLDLSMPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G    + +  K P    ++++       +I +L       +L + +  +     + 
Sbjct: 62  ---NGTEAASVIHQKVPGIGIIILSMHSDRQYVIEALKLGVKSFILKEWA-FQELVTAVR 117

Query: 129 LSLNGVRQATDRLNNQWYINQSR--------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
                    + RL++      +         +L+P E +  R +  G +  +I  +LK +
Sbjct: 118 CVFKDTSYLSPRLSDIIISGLADEGKPLGKYSLTPREEQAYRLLVAGKNCKEIGYELKIS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCET 218
            KT+  ++  VM KL +S+ A L+  A     +   E+
Sbjct: 178 SKTVETYRLKVMKKLNISNIAQLVNHAVQEGIVGRPES 215


>UniRef50_Q2IIQ2 Two component transcriptional regulator, LuxR family n=3
           Tax=Anaeromyxobacter RepID=Q2IIQ2_ANADE
          Length = 210

 Score =  205 bits (522), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 79/214 (36%), Gaps = 13/214 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   M   G+  +              T     Q+ +    +  ++   S    
Sbjct: 2   LRILLADDHAMFRSGLRRILEAEFPGASVGEAAT-IADVQERLGAQPWDVLLLDISMAGQ 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
                   L  L  + PR   +V++       +I +L        L+K    E   + + 
Sbjct: 61  NSLN---ALPPLKERHPRLPVVVLSMYGDRQFVIQALRAGA-SAYLTKERAPEELIRAIR 116

Query: 129 LSLNGVRQATDRLNNQWYI--------NQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
             L G R   D L  Q           +    LSP E EI   ++   S+++IAE+L+ +
Sbjct: 117 SVLAGRRYVGDDLAEQLADHLAGGGTGSPHERLSPRELEIFLQLAAARSVSEIAERLQLS 176

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           +KT+  ++  ++ K+ + S+A L++ A     + 
Sbjct: 177 VKTVSTYRGRILEKMALRSNAELMQYAVRHGLVG 210


>UniRef50_C6C961 Two component transcriptional regulator, LuxR family n=24
           Tax=Gammaproteobacteria RepID=C6C961_DICDC
          Length = 211

 Score =  204 bits (521), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 10/213 (4%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +   NVALI+  ++   G   L              ++ ++    + +++    +   + 
Sbjct: 1   MVMINVALIDDHIVVRSGFAQLLSLEGDIQVVGQYASAADAGVSLL-KLNVDVAVMDIAM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GLS L  L  K P  R ++++  D  A +  +L      G L+K    E   Q
Sbjct: 60  P---DESGLSLLARLRQKRPTFRAIILSIYDTAAFVQSALDAGAC-GYLTKRCGPEELVQ 115

Query: 126 ELFLSLNGVRQATDRL-----NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +     G             +++        L+P EREI   +  G S+  IAEQL  +
Sbjct: 116 AVRAVHAGGSYLCADAMRALRHSRQRPKALEALTPREREIFDLLVNGLSVKTIAEQLDLS 175

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            KT+  H+ NV+ KL  ++   L+  A     +
Sbjct: 176 HKTVHVHRANVLDKLHCATTVELVHFALQHQLL 208


>UniRef50_C7MRK0 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=2
           Tax=Saccharomonospora viridis DSM 43017
           RepID=C7MRK0_SACVD
          Length = 226

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 76/224 (33%), Gaps = 15/224 (6%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRI-----SFAA 58
           +  +   V +++   +   G+ +                 QE+      R          
Sbjct: 6   TAPETVRVMVVDDHAIVRRGLRAYLETVPDLRLVSEAADGQEAVDLLNERHVVGDPMPHV 65

Query: 59  VIFSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
           V+      R    +G+     +   +P  + +V+       R+  +LS     G + K +
Sbjct: 66  VLMDLQMPR---LDGIEATRSILASYPDVKVVVLTSFSEAERVHAALSAGAA-GYVLKDA 121

Query: 119 TLEIFHQELFLSLNGVRQATDRLNNQWYINQSRT------LSPTEREILRFMSRGYSMTQ 172
             E     +  ++ G       +        +        L+  ER+IL  + +G S  +
Sbjct: 122 EPEEVATAVRAAVKGEVHLDAAVARLLARRMASPQVGVTSLTARERDILVLVGQGLSNRE 181

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHC 216
           IA++L  + +T R H  NV+SKL +SS       A     +   
Sbjct: 182 IADRLVISERTARTHVSNVLSKLQLSSRTQAALLAIREGLVSPP 225


>UniRef50_Q46NU6 Regulatory protein, LuxR:Response regulator receiver n=1
           Tax=Ralstonia eutropha JMP134 RepID=Q46NU6_RALEJ
          Length = 214

 Score =  204 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 10/212 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+        G            +  + +  +    ++  FS    
Sbjct: 3   IRVIVADDHPLIIFGVRQALASAPGIRVVADAPDPG-ALTELLRNVPCDVLVTDFSMPCG 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL+ LT L  +FP  R +V+      A L+ S+    + G+++K   L      + 
Sbjct: 62  ATPDGLAMLTSLRQRFPHVRVVVLTML-ENAGLMVSMQDVGVLGIVNKRDDLSELPAVIA 120

Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
            +    R  +  ++             + +R LSP E E++R    G S +++A  L R+
Sbjct: 121 AAFRRRRLLSTSVHEDLRQWEHQMSQRHAARQLSPRETEVVRMYVNGMSTSEMARHLHRS 180

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           I TI   K N M KLGVS+DA L + A     
Sbjct: 181 INTISTQKTNAMRKLGVSNDAELFDYAQKHGL 212


>UniRef50_C4L5Q6 Two component transcriptional regulator, LuxR family n=2
           Tax=Bacillales RepID=C4L5Q6_EXISA
          Length = 230

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 78/233 (33%), Gaps = 28/233 (12%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
            + +  +A+++   +   G++ +F             T +E+            +I   +
Sbjct: 2   EMTQTRIAIVDDHELFREGLKRIFDLEDEFTVVAEGRTGREA-IRIAGEQKPEILIMDIN 60

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                   G+    +L++  P TR L+++  D E+ +  +L      G L K        
Sbjct: 61  MP---DMNGIEATKQLSLLSPETRVLILSIHDDESYITHALEAGA-SGFLLKEVASTELI 116

Query: 125 QELFLSLNGVRQATDRLN-----------------------NQWYINQSRTLSPTEREIL 161
             +            ++                        ++      + LS  E E+L
Sbjct: 117 SAVRAVAKDGAYLHPKVTTNVLKEYRRLLQFKGEQAGRGVESRTDDPVYQLLSRREVEVL 176

Query: 162 RFMSRGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
             ++ G S   I++ L  + KT++ H  +V+ K+ V+     +  A     + 
Sbjct: 177 HLLADGRSNRDISDMLFISEKTVKNHVSSVLRKMDVNDRTQAVVDAIRRGWVE 229


>UniRef50_C0A2L6 Response regulator receiver protein n=1 Tax=Opitutaceae bacterium
           TAV2 RepID=C0A2L6_9BACT
          Length = 240

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 80/215 (37%), Gaps = 7/215 (3%)

Query: 2   EHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIF 61
           +  R +   VA+ +   +   GIE+L R      Y     T  +  +  + R     ++ 
Sbjct: 14  QQERNRPVTVAIADDHHVVRQGIEALLRMCPDMEYVGGAST-VDEARQLVHRTRPDVLVS 72

Query: 62  SFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE 121
             S        G+  L  L  + P TR +V+        +  +         ++K    +
Sbjct: 73  DLSMPGG---SGVGFLRNLRRECPDTRIVVLTMHATALAMQDAFDSGA-HAFVAKDDAFD 128

Query: 122 IFHQELFLSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
                +    +G      R   +      ++  L+P ERE+L+ +++G S  +I  QL  
Sbjct: 129 TLVSIIRRVHSGEEFLFSRTMKEVTGGSQETPRLAPREREVLQGITKGLSTKEIGAQLFL 188

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
           + KT+  ++  +M K  V+    L+  A     + 
Sbjct: 189 SPKTVEVYRGRLMKKFNVTKGTELIHHAVASGIVP 223


>UniRef50_A1ATT6 Two component transcriptional regulator, LuxR family n=2
           Tax=Desulfuromonadales RepID=A1ATT6_PELPD
          Length = 203

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +  VM   G+ +L                  +  + +  +     +   +    
Sbjct: 2   IRVLIADDHVMFRQGLINLLTTAEDIHIAAECGDGATAL-ELIRSLEPDIAVLDITMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            + +G+S    +      TR +++   D       ++S     G + K    E     L 
Sbjct: 59  -KLDGISITRAMGNLGLATRAIILTMHDDPLMYGRAVSAGA-HGFILKDDAYEELLSALR 116

Query: 129 LSLNGVRQATDRLNNQ--WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRA 186
               G    +  + +           L+  EREIL  ++ G +   IA+ L  +IKT+  
Sbjct: 117 TVAAGGTAISRAIQHAAIEPEPPVAELTEREREILGLIAHGCTNRMIAQHLGISIKTVNN 176

Query: 187 HKFNVMSKLGVSSDAGLLEA 206
           H+ N+M KL + S A L+  
Sbjct: 177 HRTNLMGKLNLHSTAELVRY 196


>UniRef50_B5JFN7 Response regulator receiver domain protein n=1 Tax=Verrucomicrobiae
           bacterium DG1235 RepID=B5JFN7_9BACT
          Length = 220

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 78/222 (35%), Gaps = 21/222 (9%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
           +  + L +   +   G+++L             +  QE+  +A  R+    V+   +   
Sbjct: 4   RIQIVLADDQALFLEGLKTLLSLDDSLEIVGECHNGQEAL-EACRRLRPQIVLMDLNMP- 61

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
               +G++    +  + P    L +   D + R+  +L      G L K +  +   + +
Sbjct: 62  --VMDGVAATKAIKQELPEVNVLTLTTFDDDERVFEALKAG-SSGYLLKDTPSKQLVEAI 118

Query: 128 FLSLNGVRQATDRLNNQWYIN----------------QSRTLSPTEREILRFMSRGYSMT 171
               +G       + ++                        LS  E ++L ++SRG S  
Sbjct: 119 RAVSSGESFLQPSIASKVLAEFSRMSGPAAVKKAPVQLREPLSQREEQVLVWLSRGCSNK 178

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +IA  L     T++ H  NV+ KLGV         A  L  +
Sbjct: 179 EIASHLDLAEGTVKNHVSNVLGKLGVLDRTQAALMARDLGLV 220


>UniRef50_P0C0Z1 Response regulator protein vraR n=123 Tax=Firmicutes
           RepID=VRAR_STAA1
          Length = 209

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 77/211 (36%), Gaps = 11/211 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V  ++   M  IGI S     +         + +E+   A   +    ++        
Sbjct: 3   IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHE-LKPDLILMDLLM--- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
           E  +G+   T++    P+ + L++     +  +  +L    +D  + K ++ +     + 
Sbjct: 59  EDMDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAG-VDSYILKTTSAKDIADAVR 117

Query: 129 LSLNGVRQATDRL------NNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIK 182
            +  G       +        +        L+  E EIL  +++GYS  +IA      IK
Sbjct: 118 KTSRGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIK 177

Query: 183 TIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           T++ H  N++SKL V      +  A     +
Sbjct: 178 TVKTHVSNILSKLEVQDRTQAVIYAFQHNLI 208


>UniRef50_A2SCN0 Two-component response regulator n=1 Tax=Methylibium petroleiphilum
           PM1 RepID=A2SCN0_METPP
          Length = 210

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 74/210 (35%), Gaps = 12/210 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G + L    +            E+       +  A V+        
Sbjct: 3   IRVMLVDDHAIVREGYKRLLELQSDIVVVAEAGDGGEALNQW-RALRPAVVVIDLGLPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  +  L  +    R L  +       +  +L    L G ++K+S        + 
Sbjct: 62  G---GLELIARLRQRDEACRMLAFSMHRDAVWVAQALRAGAL-GYVTKSSAPSQLVAAVR 117

Query: 129 LSLNGVRQATDRLNNQ-------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G R  +  ++ +          + +  LSP E E++R +  G +  +IA+ L  ++
Sbjct: 118 EVNQGRRVLSPDVSGEVASALLDPQDSAAHGLSPREFEVMRLLVGGRTPQEIAQSLSLSV 177

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           KT+    + + SKLG +SD  L   A    
Sbjct: 178 KTVHNVHYQIKSKLGTASDFELARMAWQRG 207


>UniRef50_C7MLQ9 Response regulator containing a CheY-like receiver domain protein
           and an HTH DNA-binding domain protein n=29
           Tax=Actinobacteria (class) RepID=C7MLQ9_CRYCD
          Length = 261

 Score =  204 bits (520), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 82/220 (37%), Gaps = 20/220 (9%)

Query: 11  VALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSER 70
           V +++   +   G + +   +             E+++ +++ +    V+          
Sbjct: 45  VLIVDDQDLVRNGFKLILSSYDHVRVVGEASNGIEAYEQSLA-LRPQVVLMDIRMP---V 100

Query: 71  REGLSCLTELA--IKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
            +G++   ++       +TR LV+   DI+  +  +L      G + K +  +   + + 
Sbjct: 101 EDGIAATRKIVGDTALAQTRVLVLTTFDIDEYVYDALQAGA-SGFMLKDAEPDDIVRAVR 159

Query: 129 LSLNG-------------VRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
               G                 + R            L+  EREILRF++RG S  +IA+
Sbjct: 160 TVAAGDALIQPSITRRLIETFVSSRPRTSAAAGGLVDLTDREREILRFVARGMSNEEIAD 219

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
            L  +  T++ H   +M KL     A L+ AA     ++ 
Sbjct: 220 DLVISPATVKTHLARIMGKLDAHDRAQLVVAAYESGLVQP 259


>UniRef50_P0AGA8 Transcriptional regulatory protein uhpA n=167
           Tax=Gammaproteobacteria RepID=UHPA_ECO57
          Length = 196

 Score =  204 bits (519), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 8/197 (4%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             VALI+  ++   G   L              + +E+      R      I   S    
Sbjct: 2   ITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLPGRG-VQVCICDISMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL  L++L         ++++  D  A +  +L+     G LSK  + +     + 
Sbjct: 59  -DISGLELLSQLPK---GMATIMLSVHDSPALVEQALNAGA-RGFLSKRCSPDELIAAVH 113

Query: 129 LSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNIKTIRAHK 188
               G    T  +  +    +   L+  ER++   +++G ++ +IA +L  + KT+  H+
Sbjct: 114 TVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAAELGLSPKTVHVHR 173

Query: 189 FNVMSKLGVSSDAGLLE 205
            N+M KLGVS+D  L  
Sbjct: 174 ANLMEKLGVSNDVELAR 190


>UniRef50_C0ZBD9 Two-component response regulator n=2 Tax=Paenibacillaceae
           RepID=C0ZBD9_BREBN
          Length = 215

 Score =  204 bits (519), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 13/217 (5%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +    V + +   M+ + I SL                +E+F     +I    V+   + 
Sbjct: 1   MNAYRVLIADDHPMARMAIRSLLDPDPSFEVIGEAQNGEEAFL-LCGQIQPDLVLMDINM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE---- 121
               +  GL    E+   +P  + ++++  D  A LI ++       +L      +    
Sbjct: 60  P---KWSGLEATREVKKAYPHIKVVILSVSDDVADLITAIQFGAQGYLLKNLEPDDWINY 116

Query: 122 ---IFHQELFLSLNGVRQATDRLNNQWYINQ--SRTLSPTEREILRFMSRGYSMTQIAEQ 176
              +  ++  L+     +   R   +   ++     L+P EREI+ ++  G +  +I+E 
Sbjct: 117 LHALLGEDSELTREMATRLMYRFRQEEATDEMVPAVLTPREREIVMYVGAGKTNREISEA 176

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           L     T++ H  N++ KL +++   L   A     +
Sbjct: 177 LIIAENTVKNHLKNILEKLQLANRVQLAAYAVRHHLV 213


>UniRef50_B4DAD9 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4DAD9_9BACT
          Length = 237

 Score =  204 bits (519), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
            K  +  ++   +   G   + +            T+         +     V+   +  
Sbjct: 14  AKYRLLFVDDHPVVLDGYSLMLKSQPDLD-ICGLATNAGDAVQLFEKEHPDLVVMDLNLP 72

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
               R GL  + +L    P  R LV +  D       SL      G ++K  +  +    
Sbjct: 73  G---RSGLDLVKDLLALEPSARVLVCSMHDEMLYAERSLRAGA-KGYVTKDCSAALLLTA 128

Query: 127 LFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
           +   L G    ++RL             +   +    LS  E E+      G +  +I  
Sbjct: 129 IRRVLGGNIHVSERLAVRVLEAFAGARPRGSHSPLEKLSDREFEVFVLFGEGKTAKEIGA 188

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           +L  + KT+  H+ ++  K+   + A ++  A   +  + 
Sbjct: 189 KLNLSPKTVSVHRDHIKQKMEFGTSAEMIRQAVRWVESQP 228


>UniRef50_A9WA66 Response regulator receiver n=2 Tax=Chloroflexus RepID=A9WA66_CHLAA
          Length = 218

 Score =  203 bits (518), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 83/221 (37%), Gaps = 22/221 (9%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +   GI +L  + A           +E+  + ++ +    V+        
Sbjct: 3   IRVLIVDDQALIRTGIATLLSRKADIEVVGQAGNGREAL-ELVASLDPDVVLMDVMMP-- 59

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G+    +LA + PR   +++     + R++ S++     G L K     +    + 
Sbjct: 60  -VMDGVEATRKLAERGPRPAVIMLTTFHDDERVLQSIAAGA-RGYLLKDVDHRVLADSIR 117

Query: 129 LSLNGVRQATDRL-----------------NNQWYINQSRTLSPTEREILRFMSRGYSMT 171
               G      ++                  +    + +  L+P ER+ILR +++GY+  
Sbjct: 118 TVAGGGALIHPQIIAQLLPRLASLAPTPVTASSSPSDVTSILTPRERDILRLLAQGYTNQ 177

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           +I EQL  ++ T++ H   + +KL V         A   L 
Sbjct: 178 EIGEQLALSVGTVKNHLSVIFAKLAVRDRTQAALWAREHLL 218


>UniRef50_D1CF52 Two component transcriptional regulator, LuxR family n=2 Tax=Bacteria
            RepID=D1CF52_THET1
          Length = 1648

 Score =  203 bits (518), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 79/212 (37%), Gaps = 13/212 (6%)

Query: 9    RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
              V + +   +   GI+SL     G          QE+  + +  +S   V+   S    
Sbjct: 1439 LRVVIADDHALFRDGIKSLLESE-GFQMVGEASNGQEA-VELVHNLSPDLVLMDLSMPVM 1496

Query: 69   ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLE------- 121
                GL  +  ++   P  + +V+   + +  L  ++       +     + E       
Sbjct: 1497 G---GLDAIRLISADKPSVKVIVLTASEEDKDLFEAIKAGAQGFIPKNLESEEFFQLLRN 1553

Query: 122  IFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGY-SMTQIAEQLKRN 180
            +   E  ++     +  D  +     +  + L+  E+EIL+ +  G  S   ++ QL  +
Sbjct: 1554 VIRGEPAITPRLAGKLIDEFSRPVRSSSLQMLTDREQEILQLLVNGVTSTKDLSRQLGVS 1613

Query: 181  IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
              T++ H  N++SKL + S A ++  A     
Sbjct: 1614 EHTVKYHLRNILSKLHLQSRAQVVAWAVQHGL 1645


>UniRef50_Q39TN7 Two component transcriptional regulator, LuxR family n=1
           Tax=Geobacter metallireducens GS-15 RepID=Q39TN7_GEOMG
          Length = 210

 Score =  203 bits (518), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 13/213 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   G++ +                +E   + +    +  VI   +    
Sbjct: 3   TRILVADDHAIFREGLKQVIGTTVDMSVVDEAVDGKE-LLNKIQANDYDMVILDITMPG- 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
             R GL  LTE+    P+   LV++    E   + +       G L+K S        L 
Sbjct: 61  --RNGLDVLTEMKSIKPKLPVLVMSMHPEEQYALRAYKSGAA-GYLNKGSASNELLDALH 117

Query: 129 LSLNGVRQATDRLNNQW--------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G +  +  L              +  ++LS  E +++  ++ G ++ +IA +L  +
Sbjct: 118 KISMGKKYVSSALAESLVSGLSDHNQQDLLQSLSNREYQVMSMIASGKTVGKIATELSLS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +KT+  ++ +++ KL + ++A L         +
Sbjct: 178 VKTVSTYRAHILRKLNMKNNAELTRFVIENKLI 210


>UniRef50_C7Q6M6 Two component transcriptional regulator, LuxR family n=89
           Tax=Bacteria RepID=C7Q6M6_CATAD
          Length = 225

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 15/218 (6%)

Query: 5   RIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFS 64
           R +   V + +   M   G+ +      G           E  + A + +    ++    
Sbjct: 4   RPEVIRVLIADDHRMVRQGLRTFLELQEGIEVAGEAADGAECAERA-AELEPDVILLDLV 62

Query: 65  AMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFH 124
                  +G+  +  L       R LV+        +I ++      G + K        
Sbjct: 63  MPG---VDGVGAMELLREAGSTARVLVVTSFTDRRMIIPAIRAGA-RGYVYKDVDPAALA 118

Query: 125 QELFLSLNGVRQATDRLNNQWYIN----------QSRTLSPTEREILRFMSRGYSMTQIA 174
             +     G       +      +          Q+  L+  ERE+L  +++G +  +IA
Sbjct: 119 AAVRSVHAGHVLLEPEVATALLDSGSNGAADQGPQAPALTAREREVLVLIAQGRANREIA 178

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
             L    KT++ H  N++ KLGV+        A     
Sbjct: 179 RALVLAEKTVKTHVSNILMKLGVADRTQAALWAVRHGI 216


>UniRef50_A4XCA4 Response regulator receiver n=3 Tax=Actinomycetales
           RepID=A4XCA4_SALTO
          Length = 235

 Score =  203 bits (518), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 74/217 (34%), Gaps = 18/217 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +    +  +  +            + E        +    V+        
Sbjct: 3   IEVLVVDDQPLVRSALRMVVAEVDDM-VIAGEAETGEEAVRLTRELKPDVVLMDLRMPGM 61

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+    ++    P TR LV+   D +  + G+L      G L K  +L+     + 
Sbjct: 62  G---GIEATGQIVRLSPETRVLVLTTFDEDDHVFGALQAGAA-GFLIKNMSLDDILDAVR 117

Query: 129 LSLNGVRQATDRLNNQW-------------YINQSRTLSPTEREILRFMSRGYSMTQIAE 175
              +G       +  +                     ++  ERE+L  + RG S ++IA+
Sbjct: 118 TVAHGNGLLAPSVTRRLIKHVVDTRTAPTVPRRPLSGITEREREVLTLVGRGLSNSEIAD 177

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           +L+ +  T++ +   ++SKLG      L+ AA     
Sbjct: 178 ELRLSHATVKTYITRLLSKLGARDRVHLVIAAYEAGL 214


>UniRef50_C5V4R9 Two component transcriptional regulator, LuxR family n=2
           Tax=Proteobacteria RepID=C5V4R9_9PROT
          Length = 211

 Score =  203 bits (517), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + + +   +   GI+ +         +     + E  +     ++F  ++   S    
Sbjct: 2   IRLLIADDHAIVREGIKKILALAQDIQVEAEAVDAIEVMKHLDDGVTFDVLLLDLSMPG- 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+S +T++  ++P    L+ +  +       ++      G ++K S  EI  + + 
Sbjct: 61  --VTGMSLITQIKAQYPAFPILIFSMHNEAQIASRAIKAGAA-GFIAKDSDPEILLEAIR 117

Query: 129 LSLNGVRQATDRLNNQWYIN--------QSRTLSPTEREILRFMSRGYSMTQIAEQLKRN 180
               G       L  Q   +            LS  E EI   +  G  +  IA  L  +
Sbjct: 118 RVAAGRNYIDPALAEQMAFDALMPPKSAPHAILSSRELEIFALLVAGKRVNDIAYILNIS 177

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
            KT+  HK N+++K+ + S A L+  A     
Sbjct: 178 NKTVSTHKLNLITKMKLHSTADLVHYALEHKL 209


>UniRef50_Q2BNZ3 Transcriptional regulator, LuxR family protein n=1
           Tax=Neptuniibacter caesariensis RepID=Q2BNZ3_9GAMM
          Length = 223

 Score =  203 bits (517), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 79/217 (36%), Gaps = 16/217 (7%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + L++   +   G + L               + +S  +  +      VI   +  
Sbjct: 3   SPIKILLVDDHPLVRAGFQRLLISDESIEIVGEA-DNGQSACEMYASHMPDVVIMDLNMP 61

Query: 67  RSERRE--------GLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKAS 118
                E        GL  +  +    P+ + LV+   +I+      ++     G L+K  
Sbjct: 62  SDANTEEMSNNLNGGLEAIRRIISHDPKAKVLVLTAMEIDPFPAHVVNAGA-KGFLTKRC 120

Query: 119 TLEIFHQELFLSLNGVRQATDRLN------NQWYINQSRTLSPTEREILRFMSRGYSMTQ 172
             +   + +     G    T+ +                +L+  E +I   ++ G +++ 
Sbjct: 121 APDELLEAVKAIHAGEEYITEEIRLRITEGGSADGASLASLTKRELQIFSLLAEGRTVSI 180

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +AE++  + KT+ AH+ N+  KL +S+++ L+  A  
Sbjct: 181 VAEEMFLSPKTVHAHRTNIFRKLKISNNSELVHLAIR 217


>UniRef50_C9QDP7 DNA-binding response regulator LuxR family n=2 Tax=Vibrio
           RepID=C9QDP7_VIBOR
          Length = 209

 Score =  203 bits (517), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   +   G++S   +           T  E+ +  +  +    ++   +    
Sbjct: 2   IRLILADDHRLMQDGLKSRLEREDNLDIIACVGTGTEALEATLE-LKPDVLLLDINMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               G+  L +LA     T  ++++  D    ++ S+      G + K    E     + 
Sbjct: 59  -NLNGIEVLEQLAKTSSATSVIMLSMHDSRDYVVRSVKAGA-KGYVLKDVGSEELVMAIN 116

Query: 129 LSLNGVRQATDRLNNQW-------YINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRNI 181
               G      + +++           +  TLS  E ++L+ ++ G    +IA+ L  ++
Sbjct: 117 QVAQGRSYLCPQASDRLLEQINEAPEEKDDTLSKRESDVLKAIANGAGNKEIADSLHISV 176

Query: 182 KTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           +T+  H+  +  KLG +S A L++ A     +
Sbjct: 177 RTVETHRLRIKKKLGATSTAALVKLALQKGLV 208


>UniRef50_C1SMK1 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SMK1_9BACT
          Length = 219

 Score =  202 bits (516), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 80/216 (37%), Gaps = 16/216 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +K  +V +I+   +   G+  +  + A       +          +  I    +I   S 
Sbjct: 1   MKNYSVFIIDDHAVVREGLAMVINQEADME-VCGSADDGPVALQKLFNIEPDIIIVDLSL 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +GL  +  +  ++P    LV++  +        +      G + K+    +  +
Sbjct: 60  ---TTSDGLEVIKAIKARYPNIFILVLSMREEMVFAERCVRAGA-SGYVMKSEKPSVIIE 115

Query: 126 ELFLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIA 174
            L   + G    ++++            N    +    L+  E ++ + +  G++  QIA
Sbjct: 116 ALRKIIKGKIYFSEKMTEYILNKAMNVKNCEDKDVVEALTDREFQVFQMIGNGFTTKQIA 175

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADIL 210
            +L  ++KTI A + ++  KLG+ S   L + A   
Sbjct: 176 TKLNLSVKTIDAFRESMKHKLGLKSAPELSQYAIKW 211


>UniRef50_D2QGZ7 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QGZ7_9SPHI
          Length = 218

 Score =  202 bits (516), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 24/218 (11%)

Query: 12  ALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRIS-----FAAVIFSFSAM 66
            L++   +   GI  L  +  G          +E                  ++   S  
Sbjct: 1   MLVDDHSIVRDGIRLLLEQADGLEIIDEANDGEEVLDKLKVLQPDPSLLPDLILMDISLP 60

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+     ++  +   R L+++  + E  ++ S+       +L  +S+ +   + 
Sbjct: 61  GM---SGIQTTQVISRLYKNVRVLMLSMHNNEDYILRSVEAGAYGYILKDSSS-DEMIKA 116

Query: 127 LFLSLNGVRQATDRLNN---------------QWYINQSRTLSPTEREILRFMSRGYSMT 171
           +    +G +  +  + +                    +   LS  E+EIL+F+  G S  
Sbjct: 117 IRTIASGEKYYSSPVASIILSGYMQQLKKGDRHGRAERQSKLSNKEKEILQFLVDGMSSR 176

Query: 172 QIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           +IAE+L+ +++T+  H+ N+M +L V + A L+  A  
Sbjct: 177 EIAEKLQLSVRTVDNHRANMMRRLQVRNAAELVRMAVE 214


>UniRef50_A1VB77 Two component transcriptional regulator, LuxR family n=5
           Tax=Desulfovibrio RepID=A1VB77_DESVV
          Length = 216

 Score =  202 bits (516), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 16/219 (7%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
              V ++E   +   GI++L                 E+ +  + + +   V+   +   
Sbjct: 2   PITVVIVEDLDIVREGIKALLDANGEFIIVGEASDGIEALR-IVEKHAPDIVLMDLTLPV 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
            E   G   + E+  +   T+ L +     ++ +  +LS    DG L K ++ +I  Q +
Sbjct: 61  ME---GAEAIREIKRRRETTKVLALTAHKKDSLIYRTLSAGA-DGYLLKNASRDILFQAM 116

Query: 128 FLSLNGVRQATDRLN-----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
              L G R  +  ++            +   +    LS  E+++L+ ++ G+    +AE+
Sbjct: 117 QTVLAGRRYISPEISDLLIDDFLRHGRRDEASMLDLLSDREKQVLKLVAEGHGNKAVAEK 176

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRH 215
           L  + KT+  HK N+  KLG +S A L+  A        
Sbjct: 177 LCISHKTVEKHKANLKRKLGTASTAELVTFAIEHGLTVP 215


>UniRef50_C4DCK3 Response regulator containing a CheY-like receiver domain and an
           HTH DNA-binding domain n=3 Tax=Actinomycetales
           RepID=C4DCK3_9ACTO
          Length = 214

 Score =  202 bits (516), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 74/212 (34%), Gaps = 16/212 (7%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G+  L    A            ++       +    V+        
Sbjct: 2   IRVLLVDDQRLIRAGLRMLCEPAADIEVVGEA-DGGQAAVRLAGELCPDLVLMDLRMPGM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +G++    +  + P TR + +   D +  L  +L+      ++   S  E+  + + 
Sbjct: 61  ---DGITATQRILAERPSTRVVALTTFDDDDHLYPALAAGACGFLVKDTSPNELL-EAIR 116

Query: 129 LSLNGVRQATD-----------RLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            + +G    +            R            L+  ERE+L  +  GY+   IAE+L
Sbjct: 117 KAADGDTPFSAGVVKRIVDSAVRARASVPTATLPKLTTREREVLALVGAGYANVDIAERL 176

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
              + T++ H  ++M+K G S+   L   A  
Sbjct: 177 HLGVTTVKTHIASLMTKTGCSNRVRLAVLAVR 208


>UniRef50_Q51373 Response regulator gacA n=50 Tax=Gammaproteobacteria
           RepID=GACA_PSEAE
          Length = 214

 Score =  202 bits (516), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 14/214 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V +++   +   GI  +     G           E        +    V+        
Sbjct: 2   IKVLVVDDHDLVRTGITRMLADIEGLQVV-GQADCGEDCLKLARELKPDVVLMDVKMPGI 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL    +L    P  + +V+   + +      +      G ++K + LE   Q + 
Sbjct: 61  G---GLEATRKLLRSQPDIKVVVVTVCEEDPFPTRLMQAGAA-GYMTKGAGLEEMVQAIR 116

Query: 129 LSLNGVRQATDRLNNQWY---------INQSRTLSPTEREILRFMSRGYSMTQIAEQLKR 179
               G R  + ++  Q            +   +LS  E +I   ++  + +  I+++L  
Sbjct: 117 QVFAGQRYISPQIAQQLALKSFQPQQHDSPFDSLSEREIQIALMIANCHKVQSISDKLCL 176

Query: 180 NIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
           + KT+  +++ +  KL ++SD  L   A     +
Sbjct: 177 SPKTVNTYRYRIFEKLSITSDVELALLAVRHGMV 210


>UniRef50_B4CVL8 Two component transcriptional regulator, LuxR family n=2
           Tax=Chthoniobacter flavus Ellin428 RepID=B4CVL8_9BACT
          Length = 217

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 78/215 (36%), Gaps = 15/215 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++   V + +   +   G+ ++     G        T +E+  + + ++    V+   + 
Sbjct: 1   METTKVLIADDHQVMRRGVRAVVELLEGWEVCGEASTGREA-VEMVEKLQPQIVVMDVTM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  GL    ++    P T  L+    + E  +           +L      ++   
Sbjct: 60  PE---LNGLEATRQIKKIAPATEILMFTGLETEELIRQVFEAGARSYILKTDGREQLEAA 116

Query: 126 ELFLSLN--------GVRQATDRLNNQWYINQSR---TLSPTEREILRFMSRGYSMTQIA 174
              L+ +        G       L+ +    +      L+  EREI++ ++ G S  ++A
Sbjct: 117 LTALAAHKPYFTTQVGEILFAKFLHGKPKDEEQTVDGRLTDREREIVQLLAEGASNKEVA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
           + L  ++KT+  H+  +M KL   S + L+  A  
Sbjct: 177 DSLGISVKTVETHRAAIMKKLKFKSFSDLVRYAIR 211


>UniRef50_B9MPQ9 Two component transcriptional regulator, LuxR family n=2
           Tax=Clostridia RepID=B9MPQ9_ANATD
          Length = 211

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 82/211 (38%), Gaps = 16/211 (7%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           +KK  V +++       G++ +              T+ +   + + +     V+     
Sbjct: 1   MKKPKVLIVDDNPAVLDGLKIILELE-NFEVV-SLCTNAKEAIEFLEKKHADVVLMDIRM 58

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                 +G+     +  KFP  + +++     E  +  SLS    DG + K+S  +    
Sbjct: 59  P---VMDGIEGTFNIKTKFPNVKVIILTTFCEEDYIKKSLSFGA-DGYILKSSDAKHIVN 114

Query: 126 ELFLSLNGVRQATDRLN----------NQWYINQSRTLSPTEREILRFMSRGYSMTQIAE 175
            +   L+G       +           ++  + +++ L+  E EI + +S+GYS  +IA 
Sbjct: 115 SILSVLDGKVVMDKEIALYISDVLKRTSKQLLEKTQNLTERELEIAKLISQGYSNKEIAR 174

Query: 176 QLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
            L  +  T+R +  +++ KL + +   +   
Sbjct: 175 MLFISEGTVRNYITSILQKLNLKNRTQIAVY 205


>UniRef50_B4DA09 Two component transcriptional regulator, LuxR family n=1
           Tax=Chthoniobacter flavus Ellin428 RepID=B4DA09_9BACT
          Length = 249

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 80/214 (37%), Gaps = 17/214 (7%)

Query: 10  NVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRSE 69
            V L++   +   G+                 +   + ++ ++       +   S     
Sbjct: 19  KVLLVDDHPVVRDGLAQRIALEPDLSVCAACESVSRALRE-VTVHHPDLAVVDLSLPSGH 77

Query: 70  RREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELFL 129
              GL  + E+  ++P  R LV +  D +     +L      G + K  + +     +  
Sbjct: 78  ---GLDLIKEIHARYPEVRLLVFSMHDEQTYGERALLSGA-QGYVMKDESPDEVLAAIRK 133

Query: 130 SLNGVRQATDRLNNQWYIN------------QSRTLSPTEREILRFMSRGYSMTQIAEQL 177
            L+G    +  L+ +                    LS  E E+L +M +G S+  IA++L
Sbjct: 134 VLSGRISISAHLSARLAEAAASTRGTRARKLPMDRLSNRELEVLEWMGQGKSVKAIAQRL 193

Query: 178 KRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           +R+ KTI  ++  +  KL + S++ L+  A   +
Sbjct: 194 ERSAKTIETYRQRLKEKLNIESNSELIAHAARWV 227


>UniRef50_D1BX47 Two component transcriptional regulator, LuxR family n=14
           Tax=Actinomycetales RepID=D1BX47_XYLCX
          Length = 234

 Score =  202 bits (515), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 74/237 (31%), Gaps = 33/237 (13%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMS-RISFAAVIFSFSAM 66
              VAL++   M   G   +                 E+ +   +  +    V+      
Sbjct: 9   PIRVALVDDQQMVRAGFRMVIDSQPDMTVVAEAGDGVEALRVLGALPVRADVVLMDVRMP 68

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
           R    +GL+    L       R +V+   DI+  ++ ++      G + K +  E     
Sbjct: 69  RM---DGLTATAALTSGADAPRVVVLTTFDIDEYVLEAIRSGA-SGFMLKDAPPEEMLGA 124

Query: 127 LFLSLNGVRQATDRLNNQ-------------------WYINQSRTLSPTEREILRFMSRG 167
           +     G          +                          TL+  ERE+L  M+RG
Sbjct: 125 IRTVHAGDAVIAPSSTRRLLEHLVTALPTPAPDTPPSPAHAALATLTDREREVLELMARG 184

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHP 224
            S T+IA  L     T++ H   +++KL        +  A           + V+HP
Sbjct: 185 RSNTEIAADLFVAEATVKTHVGRILAKLDARDRVQAVVLAYE---------TGVVHP 232


>UniRef50_C5VAN3 Two component transcriptional regulator, LuxR family n=2
           Tax=Corynebacterium matruchotii RepID=C5VAN3_9CORY
          Length = 215

 Score =  202 bits (515), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 75/216 (34%), Gaps = 15/216 (6%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V + +   +   G+ ++ +            T +E+   A  R+    V         
Sbjct: 5   IRVVIADDEALIRAGLATILQASGDIEVIGEASTGEEALTVA-QRLQPDVVCMDIRMPGG 63

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL     +    P    +VI   D++  + G+L      G+L K S++    + + 
Sbjct: 64  ---DGLEATRRIQQLEPAPAVIVITTFDMDEYVFGALEAGAC-GILLKDSSMTDLVEGVR 119

Query: 129 LSLNGVRQATDRLNNQWYI----------NQSRTLSPTEREILRFMSRGYSMTQIAEQLK 178
            +  G       L  +             + S  L+P E + +  + +G S  +IA  L 
Sbjct: 120 RAALGEGLVDASLTRRVIAEFTRRKSIFTSSSEVLTPRELDCVAQLCQGMSNNEIATTLF 179

Query: 179 RNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMR 214
               T++ H  + M+K G  +   L+  A     + 
Sbjct: 180 LEPSTVKTHLSSAMAKTGTHNRVQLVIWAFRNGVVE 215


>UniRef50_Q9RPE7 Response regulator n=5 Tax=Corynebacterium RepID=Q9RPE7_CORDI
          Length = 233

 Score =  202 bits (515), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 26/230 (11%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L++   +   G   +    +           +E+ ++A +      ++        
Sbjct: 2   ITVGLVDDQQLVRAGFRMVLDSQSDITVAWEANDGKEALENA-ANTPVDVILMDVQMP-- 58

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL     +      TR +V+   D E  ++G++      G L K +  E     + 
Sbjct: 59  -VMDGLEATKRIVATNTDTRIIVLTTFDSENYVVGAVEHGA-SGFLLKDTAPEDLIAAVR 116

Query: 129 LS--------LNGVRQATDRLNNQWYINQS-------------RTLSPTEREILRFMSRG 167
                               +                        L+P E+EIL  ++ G
Sbjct: 117 TVGEQSAVISPAATAVLFKSMRGHAPQTDLVATPGGDINAGLIDPLTPREQEILLLIALG 176

Query: 168 YSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
            S T+IAE+L  ++ T++ H   V+SK G       +  A     +   +
Sbjct: 177 KSNTEIAEELFISLPTVKTHVSKVLSKTGSRDRVHAVLFAFSRGLVAPNQ 226


>UniRef50_B1ZWL0 Two component transcriptional regulator, LuxR family n=3
           Tax=Bacteria RepID=B1ZWL0_OPITP
          Length = 234

 Score =  202 bits (515), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 16/219 (7%)

Query: 4   SRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSF 63
           S   K  V L++   ++  G+  L  +            S     D + ++S    +   
Sbjct: 15  STPTKSRVFLVDDHPITRQGVAVLINQERDLM-VCGEADSAPVAIDLIQKLSPDVALVDI 73

Query: 64  SAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIF 123
           +    +   G+  +  L    P    L+++  D       +L       ++   ++ +I 
Sbjct: 74  TL---KTTSGIELMKHLKALRPEMPVLIMSMHDESLFAERALRAGAKGYIMKHEASAKIL 130

Query: 124 HQELFLSLNGVRQATDRLNNQWYIN-----------QSRTLSPTEREILRFMSRGYSMTQ 172
              +   L+G    +D++  +                  TLS  E E+ + +  GY   Q
Sbjct: 131 -TAIRRVLSGELYLSDKMKEKMLHRLVNNRKEEVVFSIDTLSDREMEVFQLIGNGYGTRQ 189

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILL 211
           IA +L  ++KTI +++ ++  KL + S   L+  A   +
Sbjct: 190 IASKLNLSVKTIDSYREHLKLKLRLESGTELVRHAIQWV 228


>UniRef50_C0DXM6 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC
           23834 RepID=C0DXM6_EIKCO
          Length = 215

 Score =  202 bits (515), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 11/212 (5%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
               + L++   +   G+  L  +  G           E             V+      
Sbjct: 4   SNIRILLVDDHPLFRRGLSFLLAQEYGFEIVAEATDGLEG-VKLARFHRPDLVLLDVEMP 62

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G   L ++    P    L++   +    L   L      G + K +  +   + 
Sbjct: 63  ---VMNGPEALAQMLDFQPGLPVLMLTISEDADNLKKCLELGA-RGYILKNADTDFLVEA 118

Query: 127 LFLSLNGVRQATDRLNNQWYINQSR------TLSPTEREILRFMSRGYSMTQIAEQLKRN 180
           +  ++ G +  +  +NN              +L+  ER++LR+++ G S   IA ++  +
Sbjct: 119 IRQAVAGQQTVSPEMNNAGQSIPPEHSAILDSLTQRERDVLRYVAGGISNKMIARRMFLS 178

Query: 181 IKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
             T++AH  N+  KL + +       A  L  
Sbjct: 179 ENTVKAHMQNIFRKLNIDNRVRAAVYARELGL 210


>UniRef50_C4V5Y3 Response regulator n=3 Tax=Selenomonas RepID=C4V5Y3_9FIRM
          Length = 223

 Score =  202 bits (514), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 72/216 (33%), Gaps = 23/216 (10%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             + L +   +   GI+ +                QE+    +  +    ++   +    
Sbjct: 3   IRILLADDHALLRQGIKRVLNFEDDLEVVGEAEDGQEALARTL-MLKPDILLLDINMPG- 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
               GL    +L     R + + +   D +  ++  L    L G L K     +  + + 
Sbjct: 61  --LTGLDVAKQLKQARSRVKIIALTIHDSDNYVLELLKNGAL-GYLLKDVEPNVLIKAIH 117

Query: 129 LSLNGVRQATDRLNNQ------------------WYINQSRTLSPTEREILRFMSRGYSM 170
           +   G      +L  +                  W  ++   L+P E ++L  +++G S 
Sbjct: 118 MVNEGNPFVYPKLAERLFGTSSISGDVGRMAKEIWDESRGERLTPREMDVLGCIAKGLSN 177

Query: 171 TQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
             I + L  + KT++ H  +V  KL V+     L  
Sbjct: 178 QDIGKALGLSEKTVKNHLTSVFHKLKVNDRTQALVY 213


>UniRef50_D2AUN6 Response regulator receiver protein n=38 Tax=Actinomycetales
           RepID=D2AUN6_STRRD
          Length = 226

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 74/219 (33%), Gaps = 19/219 (8%)

Query: 9   RNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMRS 68
             V L +   M   G+ ++                +E+  D +       V+      R 
Sbjct: 2   IRVLLADDEAMIRAGVRAILAADPEIEVVAEAGDGREA-IDLVLSHRPDVVLLDIRMPRM 60

Query: 69  ERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQELF 128
              +GL+ + EL    P T  +++     +  +  +L      G L K+         + 
Sbjct: 61  ---DGLAAVAELRRVAPGTAVVMLTTFGEDDYIARALGEGA-GGFLLKSGDPRELLAGIH 116

Query: 129 LSLNGVRQATDRLNNQ--------------WYINQSRTLSPTEREILRFMSRGYSMTQIA 174
               G    + R+ ++                  Q   L+P ER++L  +  G S  QIA
Sbjct: 117 AVAEGAAYLSPRVAHRVITQLTGGRMTRVVAAREQVAALTPRERDVLALVGEGLSNGQIA 176

Query: 175 EQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCM 213
            +L     T++AH   ++++LG  +       A     +
Sbjct: 177 RRLYLVEGTVKAHVSAILTRLGARNRVQAAILAHEAGLL 215


>UniRef50_D1B9T1 Two component transcriptional regulator, LuxR family n=1
           Tax=Thermanaerovibrio acidaminovorans DSM 6589
           RepID=D1B9T1_THEAS
          Length = 227

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 80/216 (37%), Gaps = 14/216 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++K  + L +   +   G+  L                 ++  + +S +    ++F    
Sbjct: 1   MRKIRIVLADDHRLFRDGLRRLLEMEKDMEVIGEAEDG-DATVEMVSALKPDVLLFDIHM 59

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
               +++G+  + +L       R + I   D +  +  +LS   +D  + KAS +     
Sbjct: 60  P---KKDGIQVVKDLKAMGCSPRFVAITAFDDDDHIT-ALSSVGIDAYVLKASGMAELLS 115

Query: 126 ELFLSLNGVRQATDRLNN---------QWYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +     G      ++           +   +    L+P E E+L ++S+G +  +IA +
Sbjct: 116 AIRSVYRGHSYVDPKVAGKLLSTFNRRREERDLLSRLTPREMEVLYWISQGLNNGEIARK 175

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLC 212
           +  + KT++ H  +++ KL +         A     
Sbjct: 176 MVLSEKTVKNHVSHILKKLDLVDRTQAAVFAWKRGL 211


>UniRef50_C7LQH4 Two component transcriptional regulator, LuxR family n=1
           Tax=Desulfomicrobium baculatum DSM 4028
           RepID=C7LQH4_DESBD
          Length = 222

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 81/225 (36%), Gaps = 19/225 (8%)

Query: 7   KKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAM 66
             + + +I+   +   G+ +               T  E  +     ++    +   S  
Sbjct: 3   APKRILIIDDHPLYRDGLRARLDTRPDLCVVGEAGTCAEGLR-LTQTLAPDLAVIDISLP 61

Query: 67  RSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQE 126
                 G+    E+ +  P    L+++       +  +       G +SK S  E   Q 
Sbjct: 62  ---DGSGIELTREIRLARPDLPVLIVSMHAKLDFIAAAFQAGA-SGYMSKESGGEGILQA 117

Query: 127 LFLSLNGVRQATDRLNNQWYINQSR--------------TLSPTEREILRFMSRGYSMTQ 172
           +   L+G +     L+       S               +LS  E++++R ++ G +  +
Sbjct: 118 IETVLSGGQYLDGSLSPSVLRRLSDISGRKAKTVDASYGSLSLREQQVMRLLAEGLTPEE 177

Query: 173 IAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCE 217
           IA +L  + KT+  H++ +M+KLG+ S    +  A  L  +   +
Sbjct: 178 IAAKLFVSRKTVLNHRYAIMTKLGIKSPVAFVRHAARLGLIEIDD 222


>UniRef50_A8L3K7 Two component transcriptional regulator, LuxR family n=16
           Tax=Actinomycetales RepID=A8L3K7_FRASN
          Length = 244

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 71/210 (33%), Gaps = 14/210 (6%)

Query: 6   IKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSA 65
           ++K  V +++   +   G+     +            + E+ +   + +     +     
Sbjct: 33  MEKIRVFVLDDHEIVRNGLRQTLARHDDIEVVGEAGLAAEALRRIPA-LHPHVAVLDGRL 91

Query: 66  MRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQ 125
                  G+    E+    P    L++   D +  L  ++      G + K         
Sbjct: 92  P---DGSGIDVCREVRSALPDVACLILTSYDDDEALFSAIMAGAA-GYVLKEIRGNDLVG 147

Query: 126 ELFLSLNGVRQATDRLNNQ---------WYINQSRTLSPTEREILRFMSRGYSMTQIAEQ 176
            +    +G       +  +                TL+  EREIL+ ++ G +  QI  +
Sbjct: 148 AIRTVASGQSLLAPSVTRRVLERLRDGPSEDPAMATLNQREREILQLIADGLTNRQIGTR 207

Query: 177 LKRNIKTIRAHKFNVMSKLGVSSDAGLLEA 206
           L  + KT++ +  +++ KLG++S       
Sbjct: 208 LGLSEKTVKNYVSSILEKLGLASRTQAAVY 237


>UniRef50_D2QF32 Two component transcriptional regulator, LuxR family n=1
           Tax=Spirosoma linguale DSM 74 RepID=D2QF32_9SPHI
          Length = 223

 Score =  201 bits (513), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 77/224 (34%), Gaps = 27/224 (12%)

Query: 8   KRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVIFSFSAMR 67
              + + +   +   GI  L                 E+  D ++ I    ++   +  R
Sbjct: 2   PIRILIADDHSVVRKGIRMLLEDETDIQIVGEASDGDEA-IDLLASIGTDVLLLDITMPR 60

Query: 68  SERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTLEIFHQEL 127
                G+  L  ++ K+P  R L+ +       ++ ++      G L K + LE   + +
Sbjct: 61  M---SGIEALKVISKKYPAVRTLMFSMHSNPDYIVKAVQHGAA-GYLLKDTGLEEMLRAV 116

Query: 128 FLSLNGVRQATDRLNNQWYIN---QSRTLSP-------------------TEREILRFMS 165
              ++G        ++    +    +  L+                     E ++L  + 
Sbjct: 117 RTVVDGDLYYPPNASSVIIRSLVLPNANLTKEPAKAGGSVSKSIWNRITSREGQVLTCLI 176

Query: 166 RGYSMTQIAEQLKRNIKTIRAHKFNVMSKLGVSSDAGLLEAADI 209
            G S  +IAE+   +  T+   + +++ K GV + A L+  A  
Sbjct: 177 DGMSSPEIAEKFGISPNTVANQRASIIRKAGVKNTADLIRLALE 220


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.313    0.190    0.615 

Lambda     K      H
   0.267   0.0585    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,588,252,141
Number of Sequences: 3077464
Number of extensions: 86731572
Number of successful extensions: 354986
Number of sequences better than 1.0e-01: 250
Number of HSP's better than  0.1 without gapping: 15128
Number of HSP's successfully gapped in prelim test: 15564
Number of HSP's that attempted gapping in prelim test: 295778
Number of HSP's gapped (non-prelim): 34627
length of query: 225
length of database: 1,040,396,356
effective HSP length: 124
effective length of query: 101
effective length of database: 658,790,820
effective search space: 66537872820
effective search space used: 66537872820
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.9 bits)
S2: 92 (39.5 bits)
