08/01/2012 18:15:32 : INFO  : Run start: Sun Jan  8 18:15:30 GMT 2012
08/01/2012 18:15:40 : INFO  : Initialised job
08/01/2012 18:15:43 : INFO  : Renaming log file 'phyre2_20120108_181529.log' to '/bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/phyre_20120108_181529.log'
08/01/2012 18:15:45 : INFO  : Initialised job:
Sequence
>batch____
MEHSRIKKRNVALIEKCVMSSIGIESLFRKFAGNPYKLHTYTSQESFQDAMSRISFAAVI
FSFSAMRSERREGLSCLTELAIKFPRTRRLVIADDDIEARLIGSLSPSPLDGVLSKASTL
EIFHQELFLSLNGVRQATDRLNNQWYINQSRTLSPTEREILRFMSRGYSMTQIAEQLKRN
IKTIRAHKFNVMSKLGVSSDAGLLEAADILLCMRHCETSNVLHPY

08/01/2012 18:15:47 : INFO  : Checked sequence
08/01/2012 18:15:52 : INFO  : Finding homologues with PSI-BLAST
08/01/2012 18:15:53 : INFO  : PSI-BLAST 3 iterations
08/01/2012 18:17:37 : INFO  : PSI-BLAST 5 iterations
08/01/2012 18:20:32 : INFO  : Finished PSI-BLAST
08/01/2012 18:20:35 : INFO  : Running Buildali to generate a3m file
08/01/2012 19:22:58 : INFO  : Converting to HMM
08/01/2012 19:23:04 : INFO  : Calibrating HMM
08/01/2012 19:23:18 : INFO  : Searching HMM database
08/01/2012 19:27:31 : INFO  : Finished buildali
08/01/2012 19:27:33 : INFO  : Predicting secondary structure
08/01/2012 19:27:42 : INFO  : Predicted secondary structure (PSI-Pred)
08/01/2012 19:27:44 : INFO  : Predicting Disordered regions
08/01/2012 19:27:48 : INFO  : Predicted Disorder (Disopred)
08/01/2012 19:27:50 : INFO  : Running memsat_svm check
08/01/2012 19:30:41 : INFO  : Globular protein
08/01/2012 19:30:42 : INFO  : Predicted Transmembrane (memsat_svm) ID '531791b0bc118dee'
08/01/2012 19:30:44 : INFO  : Initialising fold library search
08/01/2012 19:30:48 : INFO  : Initialised search input
08/01/2012 19:30:51 : INFO  : Building Ensemble models
08/01/2012 19:30:56 : INFO  : Building hh.c1zn2A_.model.1.pdb
08/01/2012 19:31:17 : INFO  : Building hh.c3c3wB_.model.2.pdb
08/01/2012 19:31:33 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/hh.c3c3wB_.model.2.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/c3c3wB_.2.pdb
08/01/2012 19:31:40 : INFO  : Building hh.c1rnlA_.model.3.pdb
08/01/2012 19:31:58 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/hh.c1rnlA_.model.3.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/c1rnlA_.3.pdb
08/01/2012 19:32:03 : INFO  : Building hh.c3klnC_.model.4.pdb
08/01/2012 19:32:19 : INFO  : cpying /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/hh.c3klnC_.model.4.pdb to /bmm/www/servers/phyre2/public_html/phyre2_output/531791b0bc118dee/c3klnC_.4.pdb
08/01/2012 19:32:25 : INFO  : Building c1zn2A_.1.pdb
08/01/2012 19:32:44 : INFO  : Building c3c3wB_.2.pdb
08/01/2012 19:33:06 : INFO  : Building c1rnlA_.3.pdb
08/01/2012 19:33:28 : INFO  : Building c3klnC_.4.pdb
08/01/2012 19:33:47 : INFO  : Building c1kgsA_.5.pdb
08/01/2012 19:34:09 : INFO  : Building c1ys7B_.6.pdb
08/01/2012 19:34:28 : INFO  : Building c2gwrA_.7.pdb
08/01/2012 19:34:47 : INFO  : Building c3r0jA_.8.pdb
08/01/2012 19:35:08 : INFO  : Building c2oqrA_.9.pdb
08/01/2012 19:35:28 : INFO  : Building c2hqrA_.10.pdb
08/01/2012 19:35:48 : INFO  : Building c3sztB_.11.pdb
08/01/2012 19:36:07 : INFO  : Building c2q0oA_.12.pdb
08/01/2012 19:36:26 : INFO  : Building c1p2fA_.13.pdb
08/01/2012 19:36:45 : INFO  : Building c1h0mD_.14.pdb
08/01/2012 19:37:02 : INFO  : Building c3qp5C_.15.pdb
08/01/2012 19:37:22 : INFO  : Building d1s8na_.16.pdb
08/01/2012 19:37:41 : INFO  : Building d1p4wa_.17.pdb
08/01/2012 19:38:00 : INFO  : Building c1zljE_.18.pdb
08/01/2012 19:38:19 : INFO  : Building c2krfB_.19.pdb
08/01/2012 19:38:38 : INFO  : Building c3cloC_.20.pdb
08/01/2012 19:40:13 : INFO  : Finished HH model building
08/01/2012 19:40:15 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
08/01/2012 19:41:24 : INFO  : html domain output complete ID '531791b0bc118dee'
08/01/2012 20:22:13 : INFO  : Run end  : Sun Jan  8 20:22:11 GMT 2012
