BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (203 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Es...   418   e-116
UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacter...   345   5e-94
UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_...   105   6e-22
UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_...    76   8e-13
UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escheri...    69   1e-10

>UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Escherichia coli
           RepID=YDAW_ECOLI
          Length = 203

 Score =  418 bits (1074), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180

Query: 181 GVLIITVITPSPTKNSATKMPEN 203
           GVLIITVITPSPTKNSATKMPEN
Sbjct: 181 GVLIITVITPSPTKNSATKMPEN 203


>UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacteriaceae
           RepID=B6IA78_ECOSE
          Length = 270

 Score =  345 bits (886), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 166/168 (98%), Positives = 168/168 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNN+QQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNIQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASV+
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVA 168


>UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_21186 n=1 Tax=Escherichia
           coli O157:H7 str. FRIK2000 RepID=UPI0001BCF478
          Length = 122

 Score =  105 bits (263), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 55  KKAGFVDKSAYTWRVA---DNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQ 111
           +K G VDK+ +TW +A   +  V + Q  Q E P+ +T     K++   +   I Q G +
Sbjct: 4   QKNGVVDKTGHTWFLAVEGEAGVTEGQALQPEAPDVVTEEVAPKVTADMMVEFIGQDGAK 63

Query: 112 TADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           T +ELA  FG ++RKVASTLA+  + GRL RVNQ GKFRYC+ G NLPA+PKAA V+
Sbjct: 64  TCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMSGGNLPADPKAAPVT 120


>UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_14042 n=2
          Tax=Escherichia coli O157:H7 RepID=UPI0001BCF391
          Length = 76

 Score = 75.9 bits (185), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVA---DNNV 74
          METV DALKA+ KA+S  +AARL ISREE +NELWELK  G VDK+ +TW +A   ++ V
Sbjct: 1  METVSDALKALKKASSHVVAARLGISREEAVNELWELKINGVVDKTGHTWFLAGEGESRV 60

Query: 75 QQEQPAQAELPEEIT 89
           +E+P ++E  + +T
Sbjct: 61 TEERPVKSEAQDMLT 75


>UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escherichia coli 53638
          RepID=B2N5R0_ECOLX
          Length = 170

 Score = 68.9 bits (167), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/50 (62%), Positives = 39/50 (78%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTW 67
          METVFDALKAMGKA+S E+AARL ++R+E +NELW+LK+ G  D     W
Sbjct: 1  METVFDALKAMGKASSQEVAARLGMTRDEAINELWKLKRRGEADNKGPMW 50


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Es...   360   2e-98
UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacter...   293   2e-78
UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_...   185   1e-45
UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_...   111   1e-23
UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escheri...    95   1e-18

Sequences not found previously or not previously below threshold:

UniRef50_A8AHR4 Putative uncharacterized protein n=1 Tax=Citroba...    50   6e-05
UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomyceta...    47   3e-04
UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteoba...    42   0.009
UniRef50_C8U7P5 Putative uncharacterized protein n=13 Tax=root R...    40   0.065

>UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Escherichia coli
           RepID=YDAW_ECOLI
          Length = 203

 Score =  360 bits (924), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180

Query: 181 GVLIITVITPSPTKNSATKMPEN 203
           GVLIITVITPSPTKNSATKMPEN
Sbjct: 181 GVLIITVITPSPTKNSATKMPEN 203


>UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacteriaceae
           RepID=B6IA78_ECOSE
          Length = 270

 Score =  293 bits (750), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 166/168 (98%), Positives = 168/168 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNN+QQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNIQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASV+
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVA 168


>UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_21186 n=1 Tax=Escherichia
           coli O157:H7 str. FRIK2000 RepID=UPI0001BCF478
          Length = 122

 Score =  185 bits (469), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 55  KKAGFVDKSAYTWRVA---DNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQ 111
           +K G VDK+ +TW +A   +  V + Q  Q E P+ +T     K++   +   I Q G +
Sbjct: 4   QKNGVVDKTGHTWFLAVEGEAGVTEGQALQPEAPDVVTEEVAPKVTADMMVEFIGQDGAK 63

Query: 112 TADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           T +ELA  FG ++RKVASTLA+  + GRL RVNQ GKFRYC+ G NLPA+PKAA V+
Sbjct: 64  TCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMSGGNLPADPKAAPVT 120


>UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_14042 n=2
          Tax=Escherichia coli O157:H7 RepID=UPI0001BCF391
          Length = 76

 Score =  111 bits (277), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVA---DNNV 74
          METV DALKA+ KA+S  +AARL ISREE +NELWELK  G VDK+ +TW +A   ++ V
Sbjct: 1  METVSDALKALKKASSHVVAARLGISREEAVNELWELKINGVVDKTGHTWFLAGEGESRV 60

Query: 75 QQEQPAQAELPEEIT 89
           +E+P ++E  + +T
Sbjct: 61 TEERPVKSEAQDMLT 75


>UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escherichia coli 53638
           RepID=B2N5R0_ECOLX
          Length = 170

 Score = 94.8 bits (234), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 18  METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE 77
           METVFDALKAMGKA+S E+AARL ++R+E +NELW+LK+ G  D     W +  +  +++
Sbjct: 1   METVFDALKAMGKASSQEVAARLGMTRDEAINELWKLKRRGEADNKGPMWWLT-SGDEEK 59

Query: 78  QPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELA 117
           Q    E P  +      + +E + TA  E  G +   + A
Sbjct: 60  QAGYRETP--VVDLIPQRGTESEKTARQEASGTENTGQHA 97


>UniRef50_A8AHR4 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
           BAA-895 RepID=A8AHR4_CITK8
          Length = 228

 Score = 49.8 bits (117), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 7/134 (5%)

Query: 18  METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE 77
           METV   L+ MG+AT  E+A RL+I   + L  L E +  G  D     W +     Q +
Sbjct: 1   METVIQVLEKMGRATYREVADRLEIDPVDALTMLREQRDQGLCDFGDGGWFLGTVKGQSQ 60

Query: 78  Q-----PAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLA 132
           Q     P     P          +    +   + ++G  T   LA      +R + S L 
Sbjct: 61  QSTPNAPVHP-APRLKGEEPEP-VDPDVVRQQLREQGAMTTVSLAAAVNRNARGMVSVLR 118

Query: 133 MAISKGRLIRVNQG 146
               +G +++  +G
Sbjct: 119 ALERQGVVVKNGKG 132


>UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomycetales
            RepID=B2HDY0_MYCMM
          Length = 1539

 Score = 47.4 bits (111), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEVLNELWE----LKKAGFVDKSAYTWRVADNNV 74
            E V D L+ +G  T  E+AAR D +    +    E     ++A  V  +  +W VA  ++
Sbjct: 932  EGVADLLRLLGPLTEDEVAARSDTTGGTDIGGWLEGLRAARRALEVSYAGRSWWVAVEDI 991

Query: 75   QQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVAS 129
             +            LP   T A    ++E  L        P T  E A  FG   R  A 
Sbjct: 992  GRLRDGVGAAVPVGLPAAFTEAVADPLAE-LLGRYARTHPPFTTAEAAGRFGLGLRVTAD 1050

Query: 130  TLAMAISKGRLIR 142
             L    S GRL+R
Sbjct: 1051 VLGRLASDGRLVR 1063


>UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteobacteria
            RepID=Q6D6U1_ERWCT
          Length = 1598

 Score = 42.4 bits (98), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 14/160 (8%)

Query: 12   YREKNLMETVFDALKAMGKATSIELAARLDISREEV---LNELWELKK--AGFVDKSAYT 66
            YR K   E V D L+ +G   + E+AARLD   +E    LN L   ++     +    + 
Sbjct: 952  YRAKG-KEGVADLLRELGPLCTQEVAARLDSEADEAAAFLNSLESGRRVIRVMIGAREHW 1010

Query: 67   WRVADNNVQQ---EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTT 123
              + D    +     P    LP     +T   +    +      RGP T  + A+ FG  
Sbjct: 1011 ASIEDAGRLRDALGVPLPVGLPAAFLESTADPLRS-LIARFARTRGPFTTGDAASAFGLG 1069

Query: 124  SRKVASTLAMAISKGRLIR----VNQGGKFRYCIPGDNLP 159
            +  V + L     +G+L+     V +G K    + GD  P
Sbjct: 1070 ASVVEAVLRQIAEQGKLLSGRFGVRRGMKSPPQVSGDAGP 1109


>UniRef50_C8U7P5 Putative uncharacterized protein n=13 Tax=root RepID=C8U7P5_ECO10
          Length = 129

 Score = 39.7 bits (91), Expect = 0.065,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTW 67
          M  V   L  +GKA++  ++  L+I   +V++ LW+LK  G V      W
Sbjct: 1  MNAVLTELNKLGKASAESISKGLNIDLNDVIDTLWKLKNQGVVTVKNGIW 50


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Es...   336   2e-91
UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacter...   265   7e-70
UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_...   161   1e-38
UniRef50_A8AHR4 Putative uncharacterized protein n=1 Tax=Citroba...   146   5e-34
UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomyceta...   138   1e-31
UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escheri...   124   3e-27
UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_...    98   2e-19

Sequences not found previously or not previously below threshold:

UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteoba...    86   6e-16
UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomyceta...    81   2e-14
UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinom...    77   4e-13
UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Coryne...    76   9e-13
UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliang...    75   2e-12
UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinom...    74   2e-12
UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacter...    69   1e-10
UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Ac...    68   1e-10
UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Microco...    68   3e-10
UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein...    67   3e-10
UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacter...    67   4e-10
UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia...    66   9e-10
UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytoc...    65   1e-09
UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Stre...    62   1e-08
UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candi...    60   4e-08
UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococ...    59   9e-08
UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae Re...    59   1e-07
UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalk...    59   1e-07
UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterob...    58   1e-07
UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrob...    57   4e-07
UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria Rep...    57   4e-07
UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brach...    53   9e-06
UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=...    47   4e-04
UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerth...    45   0.001
UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium gluta...    44   0.002
UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia...    44   0.003
UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Ent...    43   0.005
UniRef50_C8U7P5 Putative uncharacterized protein n=13 Tax=root R...    42   0.011
UniRef50_Q1YII8 Possible regulatory protein n=1 Tax=Aurantimonas...    41   0.024

>UniRef50_P76066 Putative uncharacterized protein ydaW n=7 Tax=Escherichia coli
           RepID=YDAW_ECOLI
          Length = 203

 Score =  336 bits (862), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSASSSACH 180

Query: 181 GVLIITVITPSPTKNSATKMPEN 203
           GVLIITVITPSPTKNSATKMPEN
Sbjct: 181 GVLIITVITPSPTKNSATKMPEN 203


>UniRef50_B6IA78 Hypothetical phage protein n=97 Tax=Enterobacteriaceae
           RepID=B6IA78_ECOSE
          Length = 270

 Score =  265 bits (677), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 166/168 (98%), Positives = 168/168 (100%)

Query: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60
           MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV
Sbjct: 1   MSSSQELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFV 60

Query: 61  DKSAYTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120
           DKSAYTWRVADNN+QQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF
Sbjct: 61  DKSAYTWRVADNNIQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLF 120

Query: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASV+
Sbjct: 121 GTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVA 168


>UniRef50_UPI0001BCF478 hypothetical protein EscherichiacoliO157_21186 n=1 Tax=Escherichia
           coli O157:H7 str. FRIK2000 RepID=UPI0001BCF478
          Length = 122

 Score =  161 bits (408), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 55/117 (47%), Positives = 75/117 (64%), Gaps = 3/117 (2%)

Query: 55  KKAGFVDKSAYTWRVA---DNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQ 111
           +K G VDK+ +TW +A   +  V + Q  Q E P+ +T     K++   +   I Q G +
Sbjct: 4   QKNGVVDKTGHTWFLAVEGEAGVTEGQALQPEAPDVVTEEVAPKVTADMMVEFIGQDGAK 63

Query: 112 TADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVS 168
           T +ELA  FG ++RKVASTLA+  + GRL RVNQ GKFRYC+ G NLPA+PKAA V+
Sbjct: 64  TCEELAGKFGVSTRKVASTLAVVTATGRLARVNQNGKFRYCMSGGNLPADPKAAPVT 120


>UniRef50_A8AHR4 Putative uncharacterized protein n=1 Tax=Citrobacter koseri ATCC
           BAA-895 RepID=A8AHR4_CITK8
          Length = 228

 Score =  146 bits (367), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 7/134 (5%)

Query: 18  METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE 77
           METV   L+ MG+AT  E+A RL+I   + L  L E +  G  D     W +     Q +
Sbjct: 1   METVIQVLEKMGRATYREVADRLEIDPVDALTMLREQRDQGLCDFGDGGWFLGTVKGQSQ 60

Query: 78  Q-----PAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLA 132
           Q     P     P          +    +   + ++G  T   LA      +R + S L 
Sbjct: 61  QSTPNAPVHP-APRLKGEEPEP-VDPDVVRQQLREQGAMTTVSLAAAVNRNARGMVSVLR 118

Query: 133 MAISKGRLIRVNQG 146
               +G +++  +G
Sbjct: 119 ALERQGVVVKNGKG 132


>UniRef50_B2HDY0 ATP-dependent helicase Lhr n=16 Tax=Actinomycetales
            RepID=B2HDY0_MYCMM
          Length = 1539

 Score =  138 bits (348), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 52/133 (39%), Gaps = 10/133 (7%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEVLNELWE----LKKAGFVDKSAYTWRVADNNV 74
            E V D L+ +G  T  E+AAR D +    +    E     ++A  V  +  +W VA  ++
Sbjct: 932  EGVADLLRLLGPLTEDEVAARSDTTGGTDIGGWLEGLRAARRALEVSYAGRSWWVAVEDI 991

Query: 75   QQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVAS 129
             +            LP   T A    ++E  L        P T  E A  FG   R  A 
Sbjct: 992  GRLRDGVGAAVPVGLPAAFTEAVADPLAE-LLGRYARTHPPFTTAEAAGRFGLGLRVTAD 1050

Query: 130  TLAMAISKGRLIR 142
             L    S GRL+R
Sbjct: 1051 VLGRLASDGRLVR 1063


>UniRef50_B2N5R0 Putative uncharacterized protein n=1 Tax=Escherichia coli 53638
           RepID=B2N5R0_ECOLX
          Length = 170

 Score =  124 bits (310), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 3/100 (3%)

Query: 18  METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQE 77
           METVFDALKAMGKA+S E+AARL ++R+E +NELW+LK+ G  D     W +  +  +++
Sbjct: 1   METVFDALKAMGKASSQEVAARLGMTRDEAINELWKLKRRGEADNKGPMWWL-TSGDEEK 59

Query: 78  QPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELA 117
           Q    E P  +      + +E + TA  E  G +   + A
Sbjct: 60  QAGYRETP--VVDLIPQRGTESEKTARQEASGTENTGQHA 97


>UniRef50_UPI0001BCF391 hypothetical protein EscherichiacoliO157_14042 n=2
          Tax=Escherichia coli O157:H7 RepID=UPI0001BCF391
          Length = 76

 Score = 97.6 bits (241), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/75 (53%), Positives = 55/75 (73%), Gaps = 3/75 (4%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVA---DNNV 74
          METV DALKA+ KA+S  +AARL ISREE +NELWELK  G VDK+ +TW +A   ++ V
Sbjct: 1  METVSDALKALKKASSHVVAARLGISREEAVNELWELKINGVVDKTGHTWFLAGEGESRV 60

Query: 75 QQEQPAQAELPEEIT 89
           +E+P ++E  + +T
Sbjct: 61 TEERPVKSEAQDMLT 75


>UniRef50_Q6D6U1 Probable ATP-dependent helicase n=4 Tax=Proteobacteria
            RepID=Q6D6U1_ERWCT
          Length = 1598

 Score = 86.0 bits (211), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 14/160 (8%)

Query: 12   YREKNLMETVFDALKAMGKATSIELAARLDISREEV---LNELWELKKAGFVDKSAYTWR 68
            YR K   E V D L+ +G   + E+AARLD   +E    LN L   ++   V   A    
Sbjct: 952  YRAKG-KEGVADLLRELGPLCTQEVAARLDSEADEAAAFLNSLESGRRVIRVMIGAREHW 1010

Query: 69   VADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTT 123
             +  +  +       P    LP     +T   +    +      RGP T  + A+ FG  
Sbjct: 1011 ASIEDAGRLRDALGVPLPVGLPAAFLESTADPL-RSLIARFARTRGPFTTGDAASAFGLG 1069

Query: 124  SRKVASTLAMAISKGRLIR----VNQGGKFRYCIPGDNLP 159
            +  V + L     +G+L+     V +G K    + GD  P
Sbjct: 1070 ASVVEAVLRQIAEQGKLLSGRFGVRRGMKSPPQVSGDAGP 1109


>UniRef50_Q2J762 DEAD/DEAH box helicase-like n=5 Tax=Actinomycetales
            RepID=Q2J762_FRASC
          Length = 1567

 Score = 81.0 bits (198), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 13/152 (8%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADN 72
            R    +E V D L+ +G  T+ E  AR   +    L EL + ++A  V  +     VA  
Sbjct: 958  RHARDVEGVADLLRMLGDLTTEEAVAR-GATPG-WLAELEQTRRALRVRIAGEERWVAIE 1015

Query: 73   NVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKV 127
            +  +       P    +P+  T      +    ++      GP   +E A   G  +  V
Sbjct: 1016 DAGRLRDALGVPLPVGVPDAFTEPVRDPLG-DLISRYARTHGPFDTEEPAARLGLGTAVV 1074

Query: 128  ASTLAMAISKGRLIRV----NQGGKFRYCIPG 155
            A  L   +  GRL+R     ++GG+ ++C  G
Sbjct: 1075 AGVLDGLVRSGRLVRGELHPDRGGE-QWCDAG 1105


>UniRef50_C6W9K2 DEAD/H associated domain protein n=3 Tax=Actinomycetales
            RepID=C6W9K2_ACTMD
          Length = 1606

 Score = 76.8 bits (187), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQ-- 76
            E   D L+ +G  +  E A R    R E L EL   ++A  V  + +   +   +  +  
Sbjct: 950  EGAADLLRFLGDLSEEEAAERG--VRPEWLTELVAARRAIRVRIAGHERVITIEDAGRVR 1007

Query: 77   ---EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAM 133
                      +PE  T      +    L       GP  A + A  FG     V   L  
Sbjct: 1008 DALGVALPVGVPEVFTEPVADPLG-DLLGRYARTHGPFPAGQAAERFGLGVAVVTGVLER 1066

Query: 134  AISKGRLIR 142
              + GRL+R
Sbjct: 1067 MAATGRLVR 1075


>UniRef50_D0L8P3 DEAD/H associated domain protein n=13 Tax=Corynebacterineae
            RepID=D0L8P3_GORB4
          Length = 1544

 Score = 75.6 bits (184), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 23/170 (13%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAG---FVDKSAYTWRV 69
            R+    E + D L+ +G  T+ E+AAR     ++    L +L +AG    V         
Sbjct: 923  RQARDAEDIVDLLRWLGPLTTEEVAARYQ--GDDAAAVLADLHRAGPIISVTHQGRPLWA 980

Query: 70   ADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTS 124
            A  +  +       PA   +P   T      ++   +       GP T  E A   G   
Sbjct: 981  AVEDTARLRDALGVPAPLGVPAAYTDPVPDPVT-DLVHRYARTHGPFTLTEAAESLGMAV 1039

Query: 125  RKVASTLAMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLSA 174
              V  TL    ++            R  + GD LPA    A  +  W  A
Sbjct: 1040 AVVRDTLVRLAAQ------------RKVVEGDFLPAAADDAHPTTQWCHA 1077


>UniRef50_D0LRE7 DEAD/H associated domain protein n=1 Tax=Haliangium ochraceum DSM
            14365 RepID=D0LRE7_HALO1
          Length = 1523

 Score = 74.9 bits (182), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 13/152 (8%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARLD---ISREEVLNELWELKKAGFVDKSAYTWRV 69
            R    ++ + D L+ +G+    EL AR D   +  E+ L EL   ++   +        V
Sbjct: 950  RRPRHVDALSDLLRRLGELDDDELRARWDAREMPVEDALAELQRARRIARLRVGGRARWV 1009

Query: 70   ADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTS 124
            A  ++              +PE       A + E  L      RGP ++ ++A  +    
Sbjct: 1010 AMEDMGLYRDALGAAPPPGVPEVFLEPVAAPV-ETLLGRFARTRGPFSSAQVAARYALPP 1068

Query: 125  RKVASTLAMAISKGRLIRVNQGGKFRYCIPGD 156
             +V + L     +G+L+R    G FR    GD
Sbjct: 1069 AQVDALLGALAGQGKLLR----GAFRPGATGD 1096


>UniRef50_A0JSK2 DEAD/H associated domain protein n=5 Tax=Actinomycetales
            RepID=A0JSK2_ARTS2
          Length = 1694

 Score = 74.5 bits (181), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 65/197 (32%), Gaps = 38/197 (19%)

Query: 18   METVFDALKAMGKATSIELAARLDISR---------------EEVLN-----------EL 51
            ME V D L+ +G  T  E+AARL+ +                 E +             L
Sbjct: 1023 MEGVADLLRLLGPLTPAEVAARLEPAGPPVAEPAPGVEPAPVVEPVGTLVADAAAHLAAL 1082

Query: 52   WELKKAGFVDKSAYTWRVADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIE 106
                +A  V+        A  +  +       P    +P          +    ++    
Sbjct: 1083 QRANRALRVNIGGVERFAAVEDAARLRDAIGVPLPMGVPLAFIEPVADPLG-DLVSRYAR 1141

Query: 107  QRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFR-YCIPGDNLPAEPKAA 165
              GP TA E A   G     V + L    + GR++     G+FR +  P   +P  P+  
Sbjct: 1142 THGPFTAAEAAARLGLGVAVVGTALKRLAADGRVVE----GEFRPHATPPRQVPETPEPG 1197

Query: 166  SV-SPLWLSASSSACHG 181
               +P   SAS+    G
Sbjct: 1198 EEDAPALPSASTITLAG 1214


>UniRef50_A6W838 DEAD/H associated domain protein n=27 Tax=Bacteria RepID=A6W838_KINRD
          Length = 1584

 Score = 68.7 bits (166), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 27/157 (17%)

Query: 19   ETVFDALKAMGKATSIELAARLD-----------ISREEV---LNELWELKKAGFVDKSA 64
            E V D L+ +G  T+ E+  R             +   EV   L  L E ++   V  + 
Sbjct: 959  EDVADLLRVLGPLTTAEVVVRSGRGEPGSQGPAALPEGEVARWLVGLEEARRLIRVRIAG 1018

Query: 65   YTWRVADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATL 119
                    +  +       P    +PE  T      ++          RGP T  ++A  
Sbjct: 1019 EEHWAVIEDAGRLRDGLGTPLPVGIPEAFTEPVADPLA-GLFGRYARTRGPFTVLDVAAR 1077

Query: 120  FGTTSRKVASTLAMAISKGRLIRVNQGGKFRYCIPGD 156
            FG         L    S GRL+     G+ R   PG 
Sbjct: 1078 FGVGRAVAHDALRRLQSAGRLVE----GELR---PGG 1107


>UniRef50_C1F7I8 DEAD/DEAH box helicase domain protein n=1 Tax=Acidobacterium
            capsulatum ATCC 51196 RepID=C1F7I8_ACIC5
          Length = 1565

 Score = 68.3 bits (165), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 14/144 (9%)

Query: 19   ETVFDALKAMGKATSIELAARLDI-SREEVLNELWELKKAGFVDKSAYTWRVADNNVQQ- 76
            + + D L  +G  +  ELA RL       VL+ L + ++   V  ++    +A  +  + 
Sbjct: 954  DGIHDLLLRLGDLSREELARRLATPDLLAVLDRLLKARRILEVKIASERRLIAVEDAARY 1013

Query: 77   ----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLA 132
                  P    + + +       + E  +       GP T  E A  FG  +R V S L 
Sbjct: 1014 RDALGIPLPPGIAKALLATVEKPVLE-LIRRFARTHGPFTLAEAAQRFGLDARAVESVLR 1072

Query: 133  MAISKGRLIRVNQGGKFRYCIPGD 156
                +GR++     G FR   PG 
Sbjct: 1073 TLALEGRVLE----GGFR---PGG 1089


>UniRef50_C5BWN7 DEAD/H associated domain protein n=3 Tax=Micrococcineae
            RepID=C5BWN7_BEUC1
          Length = 1668

 Score = 67.6 bits (163), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 14/151 (9%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEV---LNELWELKKAGFVDKSAYTWRVADNNVQ 75
            E  FD ++ +G   + E+A R  +  E V   L +L   ++   V  +      A  +  
Sbjct: 1038 EGAFDLVRRLGPVPAEEVARRA-LDPEAVPGWLADLERQRRIIAVRVAGREQWSAAEDAG 1096

Query: 76   Q-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVAST 130
            +            LP  +  +         +       GP TA E+A  FG     V   
Sbjct: 1097 RLRDALGTALPLGLPAAVLESVPDPFG-DLVRRHARTHGPFTAAEVAHRFGLAPGAVLPV 1155

Query: 131  LAMAISKGRLIRVNQGGKFRYCIPGDNLPAE 161
            L      G L      G+ R    G +  ++
Sbjct: 1156 LRTFERDGTLT----AGRLRPAASGASAGSD 1182


>UniRef50_B8GTJ5 DEAD/DEAH box helicase domain-containing protein n=1
            Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GTJ5_THISH
          Length = 1476

 Score = 67.2 bits (162), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 49/142 (34%), Gaps = 13/142 (9%)

Query: 23   DALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNN-----VQQE 77
            D L+ +G     ELA R        L  L    +A  V  +     +A  +         
Sbjct: 907  DLLRRLGDQHLDELARRCTEDPAPWLETLKHSGRAAAVRIAGEPRFIAAEDAGLYRDALG 966

Query: 78   QPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISK 137
                  LP+         + E  L      RGP    + A  FG T  +V   L   +++
Sbjct: 967  VAPPPGLPDAFLVPVPDAL-EQLLRRFARTRGPFVTKQAAARFGLTEAQVIPVLRALLTE 1025

Query: 138  GRLIRVNQGGKFRYCIPGDNLP 159
            GRL++    G+ R   PG   P
Sbjct: 1026 GRLVQ----GELR---PGGREP 1040


>UniRef50_A8L6I9 DEAD/H associated domain protein n=13 Tax=Bacteria RepID=A8L6I9_FRASN
          Length = 1613

 Score = 67.2 bits (162), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 65/195 (33%), Gaps = 29/195 (14%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADN 72
            R  + +E+  D L+A+G  T  E  AR  ++    L  L +  +   V            
Sbjct: 956  RHAHGVESTADLLRALGDLTDEEAGAR-GVAP-SWLAALADAGRVIRVRIGGEARWAPVE 1013

Query: 73   NVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKV 127
            +  +       P    +P   T      +    ++      GP     +A  FG     V
Sbjct: 1014 DAGRLRDALGVPLPMGVPAAFTEPVRDPLG-DLVSRYARTHGPFEPAAVAARFGLGVAVV 1072

Query: 128  ASTLAMAISKGRLIRV----NQGGKFRYCIPG----------DNLPAEPKAASVS----- 168
               L    + GRL+R     ++ G+ ++C  G            L  E +A         
Sbjct: 1073 VGALERLTAAGRLVRGELHPDRAGE-QWCDAGVLRALRRRSLAALRKEVEAVPTRAMGAF 1131

Query: 169  -PLWLSASSSACHGV 182
             P W S ++   HGV
Sbjct: 1132 LPAWQSVTTGRGHGV 1146


>UniRef50_D1VBA8 DEAD/H associated domain protein n=1 Tax=Frankia sp. EuI1c
            RepID=D1VBA8_9ACTO
          Length = 1675

 Score = 65.6 bits (158), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADN 72
            R    +E   D L+ +G  T+ E  AR     EE L  L    +A  V  +     VA  
Sbjct: 986  RRARDVEGAADLLRVLGDLTTAEALARGAT--EEWLRALAAAGRALEVRIAGEERWVAVE 1043

Query: 73   NVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKV 127
            +  +       P    +P   T      +    ++     RGP  A+ELA  FG      
Sbjct: 1044 DAGRLRDALGVPLPMGVPTAFTEPVRDPLG-DLVSRFTRTRGPFDAEELAARFGLGVSVA 1102

Query: 128  ASTLAMAISKGRLIR 142
               L   +  GRL+R
Sbjct: 1103 VGALERLVGAGRLVR 1117


>UniRef50_C7NJ98 ATP dependent helicase, Lhr family n=1 Tax=Kytococcus sedentarius DSM
            20547 RepID=C7NJ98_KYTSD
          Length = 1660

 Score = 65.2 bits (157), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 45/135 (33%), Gaps = 8/135 (5%)

Query: 13   REKNLMETVFDALKAMGKATSIELAARL--DISREEVLNELWELKKAGFVDKSAYTWRVA 70
            R     E + D L+ +G     ELAAR   +        EL   ++   V          
Sbjct: 1049 RRARHAEDLADLLRVLGPLDDAELAARSVPEGDPAAWTAELEGARRIVRVPVGGRDCWAV 1108

Query: 71   DNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSR 125
              +V +       P    +P+     +   ++   L       GP  A+ LA  +G    
Sbjct: 1109 VEDVARLRDALGVPVPPGIPQAAMVVSTDPLT-DLLVRHARTHGPFRAEALAERYGLGRA 1167

Query: 126  KVASTLAMAISKGRL 140
             V + L   +  GR+
Sbjct: 1168 VVVAALRELVRSGRV 1182


>UniRef50_D2AY23 Putative ATP-dependent helicase Lhr n=1 Tax=Streptosporangium roseum
            DSM 43021 RepID=D2AY23_STRRD
          Length = 1620

 Score = 62.2 bits (149), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 59/185 (31%), Gaps = 29/185 (15%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEV-LNELWELKKAGFVDKSAYTWRVADNNVQQ- 76
            E + D L++ G   + +++ R     +   L  L   ++A  V  +      A  +  + 
Sbjct: 1027 EDLADLLRSHGPLLAADVSLR---EGDPAWLTGLESARRAIRVRVAGQEQWAAIEDAARL 1083

Query: 77   ----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLA 132
                  P    +P          +    +      R P  A   A  FG     V  TL 
Sbjct: 1084 RDALGVPLPVGVPHTFLEPVDDPLG-DLVARHARTRTPFPASTAAARFGLGPAVVTDTLR 1142

Query: 133  MAISKGRLIRVNQGGKFR-------YCIPG--------DNLPAEPKAASVSPLWLSASSS 177
                 GR++     G+FR       +C  G               +   VSP  L+  + 
Sbjct: 1143 RLAVSGRVV----SGEFRPGGRGEEWCDAGVLRMLRRRSLARLRKEVEPVSPETLAVFAP 1198

Query: 178  ACHGV 182
            A HG+
Sbjct: 1199 AWHGI 1203


>UniRef50_Q023K9 ATP dependent helicase, Lhr family n=1 Tax=Candidatus Solibacter
            usitatus Ellin6076 RepID=Q023K9_SOLUE
          Length = 1521

 Score = 60.2 bits (144), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAY--TWRVADNNVQQ 76
            + + D L  +G  +  E+AAR      E L       +     ++ Y      A      
Sbjct: 937  DALHDLLLKLGDLSKEEIAARSTGGSLEDLVAARRAVRVRIAGETRYIPVEYAARYRDAV 996

Query: 77   EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAIS 136
              P    L +    ++   + E  L       GP T  E+A  +G  + +V ++L     
Sbjct: 997  GTPLPPGLADVFLESSEHPLLE-LLRRYARTHGPFTTAEVAARYGLVAAQVDASLRRQHL 1055

Query: 137  KGRLIRVNQGGKFR 150
             G+L+     G+FR
Sbjct: 1056 DGKLLE----GEFR 1065


>UniRef50_A7HB32 DEAD/H associated domain protein n=2 Tax=Myxococcales
            RepID=A7HB32_ANADF
          Length = 1553

 Score = 59.1 bits (141), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 11/139 (7%)

Query: 18   METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRV------AD 71
            ++ + D L  +G  +  ELA R          E    ++     +     R+      A 
Sbjct: 950  VDGIADLLLRLGDLSREELARRTATPELAAGAERLVAERRAVALRIGGEERLVAVEDAAR 1009

Query: 72   NNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTL 131
                   P    LPE +       + E        +  P T  ELA   G +       L
Sbjct: 1010 YRDGLGVPLPPGLPEALLGPVPDAL-EGLAARYARRHAPFTTGELAARLGISRGAAERAL 1068

Query: 132  AMAISKGRLIRVNQGGKFR 150
               + +GRL+     G FR
Sbjct: 1069 RALLERGRLLE----GAFR 1083


>UniRef50_A9WLQ1 ATP-dependent helicase n=3 Tax=Micrococcaceae RepID=A9WLQ1_RENSM
          Length = 409

 Score = 59.1 bits (141), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 47  VLNELWELKKAGFVDKSAYTWRVADNNVQQ-----EQPAQAELPEEITTATVAKISECDL 101
            + EL +  +A     +  +  +A  +  +       P    +P       +  +    +
Sbjct: 2   AITELVKANRAFTSKIAGQSVLLAVEDAARVRDALGLPLPMGIPLAFIEPVLDPLG-DLV 60

Query: 102 TATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFR 150
           +      GP    E+A  FG     V S L    + GR+++    G+FR
Sbjct: 61  SRYARTHGPFLTSEVAARFGLGVAIVQSALDRLGADGRVVQ----GEFR 105


>UniRef50_B9ZKU2 DEAD/H associated domain protein n=1 Tax=Thioalkalivibrio sp. K90mix
            RepID=B9ZKU2_9GAMM
          Length = 1506

 Score = 58.7 bits (140), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 6/129 (4%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNN----- 73
            + + D L+  G  T  E+AA    +    L +L    +A  V  +     +A  +     
Sbjct: 920  DALHDLLRRRGDLTPDEVAAACAEAPGPWLEQLARSLRAVEVRIAGEPRWIAAEDAALYR 979

Query: 74   VQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAM 133
                      LP          + E  L       GP  +++L   +G     +   L  
Sbjct: 980  DALGVVPPPGLPAAFLEPPQHPL-EQLLRRYARTHGPFRSEDLGARYGLAPGALLPALES 1038

Query: 134  AISKGRLIR 142
                G L+R
Sbjct: 1039 LERAGVLLR 1047


>UniRef50_C8Q5F9 DEAD/H associated domain protein n=2 Tax=Enterobacteriaceae
            RepID=C8Q5F9_9ENTR
          Length = 1525

 Score = 58.3 bits (139), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 22/162 (13%)

Query: 18   METVFDALKAMGKATSIELAARL--DISREEVLNELWELKKAGFVDKSAYT-WRVADNNV 74
            +E + D L+ +G  T  ELA R   D    E L  L   ++   V  +    W +A++  
Sbjct: 926  IEALSDLLREVGPLTDAELALRYSGDAPLAEGLQALQLAQRIFSVRIADQQRWALAEDAS 985

Query: 75   QQEQPAQAELPEEITTATVAKISE---CDLTATIEQRGPQTADELATLFGTTSRKVASTL 131
            +        +P+ +  A +  ++      L          TA ELA  FG     VA  L
Sbjct: 986  RLRDALGCHVPDTLPPALLQPVTRPLYDLLHRYARTHALFTASELAHHFGLGVAVVADAL 1045

Query: 132  AMAISKGRLIRVNQGGKFRYCIPGDNLPAEPKAASVSPLWLS 173
                 +G++I+            GD  P++ +     P W++
Sbjct: 1046 GELRQQGKVIK------------GDFTPSDDE----EPQWVA 1071


>UniRef50_B8HC38 DEAD/H associated domain protein n=1 Tax=Arthrobacter
            chlorophenolicus A6 RepID=B8HC38_ARTCA
          Length = 1729

 Score = 57.1 bits (136), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 38/122 (31%), Gaps = 14/122 (11%)

Query: 51   LWELKKAGFVDKSAYTWRVADNNVQQ-----EQPAQAELPEEITTATVAKISECDLTATI 105
            L    +A  V+        A  +  +       P    +P          +    ++   
Sbjct: 1110 LQRANRAIKVNIGGAERFAAVEDAARLRDAIGVPLPMGVPLAFIEPVADPLG-DLVSRYA 1168

Query: 106  EQRGPQTADELATLFGTTSRKVASTLAMAISKGRLIRVNQGGKFR-YCIPGDNLPAEPKA 164
               GP TA E A   G     V + L      GR++     G+FR +  P     A P+A
Sbjct: 1169 RTHGPFTAAEAAARLGLGVAVVGTALKRLADDGRVVE----GEFRPHATPAA---AGPEA 1221

Query: 165  AS 166
              
Sbjct: 1222 TP 1223


>UniRef50_Q2IJM9 DEAD/DEAH box helicase-like n=9 Tax=Bacteria RepID=Q2IJM9_ANADE
          Length = 1536

 Score = 56.8 bits (135), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 11/138 (7%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEV-LNELWELKKAGFVDKSAYTWRVADNNVQQ- 76
            + + D L  +G  +  E+  R         L+ L   ++A  +        VA  +  + 
Sbjct: 928  DGLADMLLRLGDLSRAEVERRSASPEVAASLDRLVAERRAVPLRVGGEERFVAVEDAARY 987

Query: 77   ----EQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLA 132
                  P    +PE +       +    +     +  P TA ELA   G         L 
Sbjct: 988  RDGLGVPLPPGVPEALLAPVPDALD-GLVARHARRHAPFTAGELAARLGLGRAAAERVLE 1046

Query: 133  MAISKGRLIRVNQGGKFR 150
                 GRL+     G FR
Sbjct: 1047 RLARAGRLLE----GAFR 1060


>UniRef50_C7MDW5 ATP dependent helicase, Lhr family n=1 Tax=Brachybacterium faecium
            DSM 4810 RepID=C7MDW5_BRAFD
          Length = 1601

 Score = 52.5 bits (124), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 49/138 (35%), Gaps = 12/138 (8%)

Query: 19   ETVFDALKAMGKATSIELAARL--DISREEVLNELWELKKAGFVDKSAYTWRVADNN--- 73
            E + DAL+ +G  T+ +L+ R    +  E  L +L   ++   V  +      A  +   
Sbjct: 966  EQIADALRRLGPLTADDLSRRTAEGVDLEAELEQLTRARRIISVRLAGREHVAAVEDAGL 1025

Query: 74   --VQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTL 131
                        LP+    A V +     L      RGP  A +    FG        TL
Sbjct: 1026 LRDALGTALPPGLPQAHL-APVDRAVPQLLARWARGRGPFPAADAVEAFGLAPGVARGTL 1084

Query: 132  AMAISKGRLIRVNQGGKF 149
                ++    RV Q G+F
Sbjct: 1085 EQLTAE----RVLQQGEF 1098


>UniRef50_UPI0001C317F9 DEAD/H associated domain protein n=1 Tax=Conexibacter woesei DSM
            14684 RepID=UPI0001C317F9
          Length = 1480

 Score = 47.1 bits (110), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 48/141 (34%), Gaps = 18/141 (12%)

Query: 23   DALKAMGKATSIELAARL--DISREEVLNELWELKKAGFVDKSAYTWRV--ADNNVQQEQ 78
            D L+ +G  T+ E A R+   +     L+ L   ++A  +        V  AD  + ++ 
Sbjct: 902  DVLRRVGDLTAAEAAQRVVPGVDAAAALDALASERRAVLLRIGGEQRWVDAADAGMYRDA 961

Query: 79   PA---QAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTLAMAI 135
                    LPE         +    L    +  GP T +E    FG         L    
Sbjct: 962  LGVVPPGGLPEAFLADVPDALVR-LLRRYAQTHGPFTTEEPRLRFGVDP---TPALRALE 1017

Query: 136  SKGRLIRVNQGGKFRYCIPGD 156
              G L++    G+ R   PG 
Sbjct: 1018 RDGELVQ----GELR---PGG 1031


>UniRef50_C8WJH4 DEAD/H associated domain protein n=1 Tax=Eggerthella lenta DSM 2243
            RepID=C8WJH4_EGGLE
          Length = 1741

 Score = 45.2 bits (105), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 70   ADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVAS 129
            A   ++  + A AE         +  + E  L       GP +A+  A  FG        
Sbjct: 1149 AQREIEGSRAASAESDG--GEDALHPLDE-LLARYARTHGPFSAEAAAARFGIGVAVARD 1205

Query: 130  TLAMAISKGRLI--RVNQGGKFRYC 152
             LA   S GRL+  R  + G  R C
Sbjct: 1206 GLARLTSAGRLMQGRFGEDGDGRAC 1230


>UniRef50_Q8NS36 Lhr-like helicases n=2 Tax=Corynebacterium glutamicum
            RepID=Q8NS36_CORGL
          Length = 1520

 Score = 44.4 bits (103), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 5    QELRSNFYREKNLMETVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSA 64
            Q+LR    R     E + D+L+ +G     EL   +     ++ +    ++  G  +  A
Sbjct: 924  QQLRRQGDRAARNNEELADSLRILGPIPLDELGEHITFENPDLEDRAMTVRINGR-EHLA 982

Query: 65   YTWRVADNNVQQEQPAQAELPEEITTATVAKISECDLTATIEQRGPQTADELATLFGTTS 124
                          P    +P ++   T+    E  +   +  RGP TA++LA  FG   
Sbjct: 983  QVLDAPLLRDALGVPVPPGVPAQV--ETITDALEQLVNRWVRTRGPFTANDLAEAFGLGI 1040

Query: 125  RKVASTLAMA 134
                + L  A
Sbjct: 1041 ATAITALQSA 1050


>UniRef50_C7R3F9 DEAD/H associated domain protein n=1 Tax=Jonesia denitrificans DSM
            20603 RepID=C7R3F9_JONDD
          Length = 1618

 Score = 44.4 bits (103), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 40/162 (24%)

Query: 19   ETVFDALKAMGKATSIELAAR-LDISREE-----------------------------VL 48
            E V+D L+  G  T   L AR + I R++                             V+
Sbjct: 974  EDVWDFLQRWGPITVEGLGARWVGIDRDDLVQVDPHHLNRSVDALSCPDPRGVDWARDVV 1033

Query: 49   NELWELKKAGFV---DKSAYTWRVADN------NVQQEQPAQAELPEEITTATVAKISEC 99
             EL + ++   V    +S     VA                   + +E +      +   
Sbjct: 1034 AELVQSRRVFPVRLMTRSGPREYVASIVDAGRLRDALGVAIPPGIADEWSAPVRDPLG-D 1092

Query: 100  DLTATIEQRGPQTADELATLFGTTSRKVASTLAMAISKGRLI 141
             +    +   P T D++A  FG     V   +   ++ G ++
Sbjct: 1093 MVRRYAKTHVPFTVDDVAERFGVGRAVVFDVVRRLVASGVVV 1134


>UniRef50_P30015 Probable ATP-dependent helicase lhr n=44 Tax=Enterobacteriaceae
            RepID=LHR_ECOLI
          Length = 1538

 Score = 43.3 bits (100), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 9/135 (6%)

Query: 19   ETVFDALKAMGKATSIELAARLDISREEV---LNELWELKKAGFVDKSAYTWRVADNNVQ 75
            E +FD L+ +G  T  +LA R   S EEV   L  L  +K+      S    R+A  +  
Sbjct: 939  EGLFDLLRELGPMTVEDLAQRHTGSSEEVASYLENLLAVKRIFPAMISGQE-RLACMDDA 997

Query: 76   Q--EQPAQAELPEEITTATVAKIS---ECDLTATIEQRGPQTADELATLFGTTSRKVAST 130
                      LPE +    + ++S          +      TA++LA  F      V   
Sbjct: 998  ARLRDALGVRLPESLPEIYLHRVSYPLRDLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQ 1057

Query: 131  LAMAISKGRLIRVNQ 145
            L     +G ++ + Q
Sbjct: 1058 LQQLREQGLVMNLQQ 1072


>UniRef50_C8U7P5 Putative uncharacterized protein n=13 Tax=root RepID=C8U7P5_ECO10
          Length = 129

 Score = 42.1 bits (97), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 18 METVFDALKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTW 67
          M  V   L  +GKA++  ++  L+I   +V++ LW+LK  G V      W
Sbjct: 1  MNAVLTELNKLGKASAESISKGLNIDLNDVIDTLWKLKNQGVVTVKNGIW 50


>UniRef50_Q1YII8 Possible regulatory protein n=1 Tax=Aurantimonas manganoxydans
           SI85-9A1 RepID=Q1YII8_MOBAS
          Length = 344

 Score = 41.0 bits (94), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 25/170 (14%)

Query: 25  LKAMGKATSIELAARLDISREEVLNELWELKKAGFVDKSAYTWRVADNNVQQEQ------ 78
           L A+G  T   LA RL ISR  V   L EL++ G V +               +      
Sbjct: 41  LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVKRVKGKGYAVLAGNASARKPPLPG 100

Query: 79  ----PAQAELPEEIT---TATVAKISECDLTATIEQRGPQTADELATLFGTTSRKVASTL 131
               PA    P + +        ++ +  +              LA  +G +       +
Sbjct: 101 NTASPAHDGSPLQSSPSWERIYGEVEDQVIARISFASWRVNEARLARHYGVSRTVARDVV 160

Query: 132 AMAISKGRLIRVNQGGKFRYCIPGDNLPA--------EP----KAASVSP 169
                +G L + ++G  +   +  D++          EP    KAA  +P
Sbjct: 161 GRLQQRGVLRKDDRGRWYAPALTPDHIAELYELRSILEPIALTKAAPHAP 210


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.302    0.120    0.307 

Lambda     K      H
   0.267   0.0375    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 960,747,861
Number of Sequences: 3077464
Number of extensions: 31897090
Number of successful extensions: 95273
Number of sequences better than 1.0e-01: 38
Number of HSP's better than  0.1 without gapping: 31
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 95201
Number of HSP's gapped (non-prelim): 64
length of query: 203
length of database: 1,040,396,356
effective HSP length: 122
effective length of query: 81
effective length of database: 664,945,748
effective search space: 53860605588
effective search space used: 53860605588
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.4 bits)
S2: 89 (39.0 bits)