140 c3cjpA_ Probab=98.17   E-value=0.00051  Score=42.96  Aligned_columns=223  Identities=13%

Q ss_pred             ECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCH----------------------------HHHHHHHHHH
Q ss_conf             704226887426989999999983985999569986455888----------------------------9999999850
Q batch____        87 IDAHLHIESSMMTPVTFETATLPRGLTTVICDPHEIVNVMGE----------------------------AGFAWFARCA  138 (588)
Q Consensus        87 ID~H~Hie~s~~tp~~~a~~~l~~GvTTvv~d~~e~a~v~g~----------------------------~gi~~~i~~~  138 (588)
                      ||+|+|+...   .+.+.+.+-..|+...+..+.........                            ....++.+..
T Consensus         3 ID~H~Hl~~~---~~~~~~~~~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (262)
T c3cjpA_           3 IDGHTHVILP---VEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSMIDVRRNSIKELTNVI   79 (262)
T ss_dssp             EEEEEECCSS---HHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTCHHHHHHHHHHHHHHH
T ss_pred             EEEEEECCCC---HHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHCCCEEEECCCCCCCCHHHHHHHHHHH
T ss_conf             8998502697---8999999997699569983587885783108999984222035516630653222136789999997


Q ss_pred             CCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECC-
Q ss_conf             0258869997134466667554533125889998874465420331002522256782899999997279879997143-
Q batch____       139 EQARQNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPG-  217 (588)
Q Consensus       139 ~~~~~~~~~~~~s~~p~~~~~e~~~~~~~~~~~~~~~~~~~v~~l~ev~~~~~v~~~~~~~l~~ia~~~~~~i~gH~~~-  217 (588)
                      +..+-+...............       ..++.........+.++................++.++..+..++..|... 
T Consensus        80 ~~~~~r~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~  152 (262)
T c3cjpA_          80 QAYPSRYVGFGNVPVGLSEND-------TNSYIEENIVNNKLVGIGELTPASGQIKSLKPIFKYSMDSGSLPIWIHAFNP  152 (262)
T ss_dssp             HHSTTTEEEEECCCTTCCHHH-------HHHHHHHHTTTTTCSEEEEECCCTTCGGGGHHHHHHHHHTTCCCEEECCSTT
T ss_pred             HHHCCCCCCCEEECCCCCCHH-------HHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf             630275002202125788068-------9999999712487508984588767885389999999964995599926887


Q ss_pred             -------CCHHHHHHHHHCCCEEEECCC-CHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf             -------568889999847963997269-998998999679839964874435989999999707997799983789887
Q batch____       218 -------LGGKELNAYITAGIENCHESY-QLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNSPQCMLCTDDRNPW  289 (588)
Q Consensus       218 -------~~~~~l~~~~~~Gi~~~H~~~-~~~e~~e~l~~G~~v~~~~~s~~~~~~~l~~~i~~~~~~~i~l~TD~~~~~  289 (588)
                             .-...+..+....+-..|... ...+..+.+...-.+..-.+....  ..+...+...+..+++++||...  
T Consensus       153 ~~~~~~~~~~~~~~~~P~~~~i~~H~g~~~~~~~~~~l~~~~n~y~d~s~~~~--~~~~~~~~~~g~dril~GSD~P~--  228 (262)
T c3cjpA_         153 LVLQDIKEIAELCKAFPKVPVILGHMGGSNWMTAVELAKEIQNLYLDTSAYFS--TFVLKIVINELPLKCIFGTDMPF--  228 (262)
T ss_dssp             CCHHHHHHHHHHHHHSTTSCEEEGGGGGGGHHHHHHHHHHCTTEEEECTTCSC--HHHHHHHHHHSTTTEECCCCTTS--
T ss_pred             CCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCH--HHHHHHHHHHCCCEEEEECCCCC--
T ss_conf             77589899999999689985899628877889999999604556170122688--99999998509231999038689--


Q ss_pred             CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf             8200043899999999815989889999883668998056
Q batch____       290 EIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGL  329 (588)
Q Consensus       290 ~l~~~g~l~~~ir~av~~G~~p~~~Ai~~aT~NpA~~lGl  329 (588)
                           ......+....+.+ ++.++.=+..--|+++.|||
T Consensus       229 -----~~~~~~~~~~~~~~-l~~~~~~~i~~~Na~rl~~l  262 (262)
T c3cjpA_         229 -----GDLQLSIEAIKKMS-NDSYVANAVLGDNISRLLNI  262 (262)
T ss_dssp             -----SCHHHHHHHHHHHC-SSHHHHHHHHTHHHHHHHTC
T ss_pred             -----CCHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHCC
T ss_conf             -----99899999999479-89899999971339999585