Secondary structure and disorder prediction

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Sequence		M	K	P	A	R	V	P	Q	T	V	V	A	P	D	C	W	G	D	L	P	W	G	K	L	Y	R	K	A	L	E	R	Q	L	N	P	W	F	T	K	M	Y	G	F	H	L	L	K	I	G	N	L	S	A	E	I	N	C	E	A	C
Secondary structure
SS confidence
Disorder		?	?	?	?	?	?	?	?	?	?	?																																										?		?	?	?
Disorder confidence
		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Sequence		A	V	S	H	Q	V	N	V	S	A	Q	G	M	P	V	Q	V	Q	A	D	P	L	H	L	P	F	A	D	K	S	V	D	V	C	L	L	A	H	T	L	P	W	C	T	D	P	H	R	L	L	R	E	A	D	R	V	L	I	D	D
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Sequence		G	W	L	V	I	S	G	F	N	P	I	S	F	M	G	L	R	K	L	V	P	V	L	R	K	T	S	P	Y	N	S	R	M	F	T	L	M	R	Q	L	D	W	L	S	L	L	N	F	E	V	L	H	A	S	R	F	H	V	L	P
Secondary structure
SS confidence
Disorder
Disorder confidence
		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence		W	N	K	H	G	G	K	L	L	N	A	H	I	P	A	L	G	C	L	Q	L	I	V	A	R	K	R	T	I	P	L	T	L	N	P	M	K	Q	S	K	N	K	P	R	I	R	Q	A	V	G	A	T	R	Q	C	R	K	P	Q	A
Secondary structure
SS confidence
Disorder					?	?																									?	?	?	?		?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?	?
Disorder confidence
Sequence
Secondary structure
SS confidence
Disorder
Disorder confidence

Confidence Key
High(9)											Low (0)

?	Disordered
	Alpha helix
	Beta strand

Domain analysis

Hover over an aligned region to see model and summary info

Please note, only up to the top 20 hits are modelled to reduce computer load

Rank Aligned region

PDB 2gs9 chain A Region: 7 - 207 Aligned: 197 Modelled: 201 Confidence: 100.0% Identity: 23% PDB header:transferase Chain: A: PDB Molecule:hypothetical protein tt1324; PDBTitle: crystal structure of tt1324 from thermus thermophilis hb8 Phyre2 PDB 1vlm chain A Region: 13 - 207 Aligned: 189 Modelled: 194 Confidence: 99.9% Identity: 19% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: UbiE/COQ5-like Phyre2 PDB 2yr0 chain A Region: 25 - 176 Aligned: 152 Modelled: 152 Confidence: 99.9% Identity: 17% PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ttha0223; PDBTitle: crystal structure of hypothetical methyltransferase ttha0223 from2 thermus thermophilus hb8 Phyre2 PDB 3cc8 chain A Region: 33 - 209 Aligned: 176 Modelled: 168 Confidence: 99.9% Identity: 15% PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of a putative methyltransferase (bce_1332) from2 bacillus cereus atcc 10987 at 1.64 a resolution Phyre2 PDB 3l8d chain A Region: 29 - 207 Aligned: 175 Modelled: 175 Confidence: 99.8% Identity: 16% PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: crystal structure of methyltransferase from bacillus2 thuringiensis Phyre2 PDB 3dli chain B Region: 26 - 206 Aligned: 176 Modelled: 181 Confidence: 99.8% Identity: 17% PDB header:transferase Chain: B: PDB Molecule:methyltransferase; PDBTitle: crystal structure of a sam dependent methyltransferase from2 archaeoglobus fulgidus Phyre2 PDB 1vl5 chain A Region: 31 - 208 Aligned: 178 Modelled: 178 Confidence: 99.8% Identity: 18% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: UbiE/COQ5-like Phyre2 PDB 3g5l chain A Region: 26 - 207 Aligned: 180 Modelled: 181 Confidence: 99.8% Identity: 14% PDB header:transferase Chain: A: PDB Molecule:putative s-adenosylmethionine dependent PDBTitle: crystal structure of putative s-adenosylmethionine2 dependent methyltransferase from listeria monocytogenes Phyre2 PDB 1vl5 chain B Region: 31 - 208 Aligned: 178 Modelled: 178 Confidence: 99.8% Identity: 18% PDB header:transferase Chain: B: PDB Molecule:unknown conserved protein bh2331; PDBTitle: crystal structure of a putative methyltransferase (bh2331) from2 bacillus halodurans c-125 at 1.95 a resolution Phyre2 PDB 3bkx chain B Region: 9 - 179 Aligned: 171 Modelled: 171 Confidence: 99.8% Identity: 15% PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution Phyre2 PDB 2p7i chain A domain 1 Region: 32 - 206 Aligned: 175 Modelled: 174 Confidence: 99.8% Identity: 13% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: UbiE/COQ5-like Phyre2 PDB 2o57 chain A domain 1 Region: 23 - 176 Aligned: 152 Modelled: 154 Confidence: 99.8% Identity: 13% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: Mycolic acid cyclopropane synthase Phyre2 PDB 2zfu chain A Region: 14 - 174 Aligned: 130 Modelled: 140 Confidence: 99.8% Identity: 24% PDB header:nuclear protein Chain: A: PDB Molecule:cerebral protein 1; PDBTitle: structure of the methyltransferase-like domain of nucleomethylin Phyre2 PDB 3bkw chain B Region: 29 - 206 Aligned: 177 Modelled: 178 Confidence: 99.8% Identity: 20% PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine dependent methyltransferase; PDBTitle: crystal structure of s-adenosylmethionine dependent methyltransferase2 (np_104914.1) from mesorhizobium loti at 1.60 a resolution Phyre2 PDB 3f4k chain A Region: 26 - 207 Aligned: 178 Modelled: 182 Confidence: 99.8% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of a probable methyltransferase from2 bacteroides thetaiotaomicron. northeast structural3 genomics target btr309. Phyre2 PDB 1jqe chain A Region: 23 - 174 Aligned: 152 Modelled: 152 Confidence: 99.8% Identity: 14% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: Histamine methyltransferase Phyre2 PDB 3ndj chain A Region: 3 - 176 Aligned: 170 Modelled: 170 Confidence: 99.8% Identity: 13% PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product Phyre2 PDB 2p7i chain B Region: 32 - 208 Aligned: 177 Modelled: 176 Confidence: 99.8% Identity: 15% PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a sam dependent methyl-transferase type 12 family2 protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.74 a3 resolution Phyre2 PDB 2a14 chain A domain 1 Region: 14 - 207 Aligned: 177 Modelled: 194 Confidence: 99.8% Identity: 15% Fold: S-adenosyl-L-methionine-dependent methyltransferases Superfamily: S-adenosyl-L-methionine-dependent methyltransferases Family: Arylamine N-methyltransferase Phyre2 PDB 3e7p chain A Region: 27 - 196 Aligned: 166 Modelled: 170 Confidence: 99.8% Identity: 10% PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482 Phyre2 1 c2gs9A_ 2 d1vlma_ 3 c2yr0A_ 4 c3cc8A_ 5 c3l8dA_ 6 c3dliB_ 7 d1vl5a_ 8 c3g5lA_ 9 c1vl5B_ 10 c3bkxB_ 11 d2p7ia1 12 d2o57a1 13 c2zfuA_ 14 c3bkwB_ 15 c3f4kA_ 16 d1jqea_ 17 c3ndjA_ 18 c2p7iB_ 19 d2a14a1 20 c3e7pA_ 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c2gs9A_ 100.0 23 PDB header:transferase Chain: A: PDB Molecule:hypothetical protein tt1324; PDBTitle: crystal structure of tt1324 from thermus thermophilis hb8 2 d1vlma_ 99.9 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 3 c2yr0A_ 99.9 17 PDB header:transferase Chain: A: PDB Molecule:hypothetical protein ttha0223; PDBTitle: crystal structure of hypothetical methyltransferase ttha0223 from2 thermus thermophilus hb8 4 c3cc8A_ 99.9 15 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of a putative methyltransferase (bce_1332) from2 bacillus cereus atcc 10987 at 1.64 a resolution 5 c3l8dA_ 99.8 16 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: crystal structure of methyltransferase from bacillus2 thuringiensis 6 c3dliB_ 99.8 17 PDB header:transferase Chain: B: PDB Molecule:methyltransferase; PDBTitle: crystal structure of a sam dependent methyltransferase from2 archaeoglobus fulgidus 7 d1vl5a_ 99.8 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 8 c3g5lA_ 99.8 14 PDB header:transferase Chain: A: PDB Molecule:putative s-adenosylmethionine dependent PDBTitle: crystal structure of putative s-adenosylmethionine2 dependent methyltransferase from listeria monocytogenes 9 c1vl5B_ 99.8 18 PDB header:transferase Chain: B: PDB Molecule:unknown conserved protein bh2331; PDBTitle: crystal structure of a putative methyltransferase (bh2331) from2 bacillus halodurans c-125 at 1.95 a resolution 10 c3bkxB_ 99.8 15 PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of cyclopropane-fatty-acyl-phospholipid synthase-2 like protein (yp_807781.1) from lactobacillus casei atcc 334 at 1.853 a resolution 11 d2p7ia1 99.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 12 d2o57a1 99.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 13 c2zfuA_ 99.8 24 PDB header:nuclear protein Chain: A: PDB Molecule:cerebral protein 1; PDBTitle: structure of the methyltransferase-like domain of nucleomethylin 14 c3bkwB_ 99.8 20 PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine dependent methyltransferase; PDBTitle: crystal structure of s-adenosylmethionine dependent methyltransferase2 (np_104914.1) from mesorhizobium loti at 1.60 a resolution 15 c3f4kA_ 99.8 13 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of a probable methyltransferase from2 bacteroides thetaiotaomicron. northeast structural3 genomics target btr309. 16 d1jqea_ 99.8 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Histamine methyltransferase 17 c3ndjA_ 99.8 13 PDB header:transferase Chain: A: PDB Molecule:methyltransferase; PDBTitle: x-ray structure of a c-3'-methyltransferase in complex with s-2 adenosyl-l-homocysteine and sugar product 18 c2p7iB_ 99.8 15 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of a sam dependent methyl-transferase type 12 family2 protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.74 a3 resolution 19 d2a14a1 99.8 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Arylamine N-methyltransferase 20 c3e7pA_ 99.8 10 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase; PDBTitle: crystal structure of of putative methyltransferase from bacteroides2 vulgatus atcc 8482 21 d1nkva_ not modelled 99.8 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Hypothetical Protein YjhP 22 d1xxla_ not modelled 99.8 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 23 d2gh1a1 not modelled 99.8 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:BC2162-like 24 c3h2bB_ not modelled 99.8 17 PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of the sam-dependent methyltransferase2 cg3271 from corynebacterium glutamicum in complex with s-3 adenosyl-l-homocysteine and pyrophosphate. northeast4 structural genomics consortium target cgr113a 25 c3mggB_ not modelled 99.8 16 PDB header:transferase Chain: B: PDB Molecule:methyltransferase; PDBTitle: crystal structure of methyl transferase from methanosarcina2 mazei 26 d2avna1 not modelled 99.8 21 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:UbiE/COQ5-like 27 c3ou7A_ not modelled 99.7 10 PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: dhpi-sam-hep complex 28 c3egeA_ not modelled 99.7 12 PDB header:transferase Chain: A: PDB Molecule:putative methyltransferase from antibiotic biosynthesis PDBTitle: crystal structure of putative methyltransferase from antibiotic2 biosynthesis pathway (yp_324569.1) from anabaena variabilis atcc3 29413 at 2.40 a resolution 29 c3dlcA_ not modelled 99.7 15 PDB header:transferase Chain: A: PDB Molecule:putative s-adenosyl-l-methionine-dependent PDBTitle: crystal structure of a putative s-adenosyl-l-methionine-dependent2 methyltransferase (mmp1179) from methanococcus maripaludis at 1.15 a3 resolution 30 d2ex4a1 not modelled 99.7 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like 31 c3ujcA_ not modelled 99.7 14 PDB header:transferase Chain: A: PDB Molecule:phosphoethanolamine n-methyltransferase; PDBTitle: phosphoethanolamine methyltransferase mutant (h132a) from plasmodium2 falciparum in complex with phosphocholine 32 c3dh0B_ not modelled 99.7 18 PDB header:transferase Chain: B: PDB Molecule:sam dependent methyltransferase; PDBTitle: crystal structure of a sam dependent methyltransferase from2 aquifex aeolicus 33 d1p91a_ not modelled 99.7 19 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:rRNA methyltransferase RlmA 34 d1kpga_ not modelled 99.7 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 35 c3e8sA_ not modelled 99.7 13 PDB header:transferase Chain: A: PDB Molecule:putative sam dependent methyltransferase; PDBTitle: crystal structure of putative sam dependent methyltransferase in2 complex with sah (np_744700.1) from pseudomonas putida kt2440 at 2.103 a resolution 36 d1kpia_ not modelled 99.7 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 37 c3busB_ not modelled 99.7 18 PDB header:transferase Chain: B: PDB Molecule:methyltransferase; PDBTitle: crystal structure of rebm 38 c3merA_ not modelled 99.7 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:slr1183 protein; PDBTitle: crystal structure of the methyltransferase slr1183 from2 synechocystis sp. pcc 6803, northeast structural genomics3 consortium target sgr145 39 c2fk8A_ not modelled 99.7 10 PDB header:transferase Chain: A: PDB Molecule:methoxy mycolic acid synthase 4; PDBTitle: crystal structure of hma (mmaa4) from mycobacterium tuberculosis2 complexed with s-adenosylmethionine 40 c3ccfB_ not modelled 99.7 14 PDB header:transferase Chain: B: PDB Molecule:cyclopropane-fatty-acyl-phospholipid synthase; PDBTitle: crystal structure of putative methyltransferase (yp_321342.1) from2 anabaena variabilis atcc 29413 at 1.90 a resolution 41 d1l1ea_ not modelled 99.7 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 42 c2p35A_ not modelled 99.7 10 PDB header:transferase Chain: A: PDB Molecule:trans-aconitate 2-methyltransferase; PDBTitle: crystal structure of trans-aconitate methyltransferase from2 agrobacterium tumefaciens 43 d1r74a_ not modelled 99.7 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Glycine N-methyltransferase 44 d2g72a1 not modelled 99.7 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Arylamine N-methyltransferase 45 d2fk8a1 not modelled 99.7 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 46 c3ofkA_ not modelled 99.7 14 PDB header:transferase Chain: A: PDB Molecule:nodulation protein s; PDBTitle: crystal structure of n-methyltransferase nods from bradyrhizobium2 japonicum wm9 in complex with s-adenosyl-l-homocysteine (sah) 47 c3bgvC_ not modelled 99.7 11 PDB header:transferase Chain: C: PDB Molecule:mrna cap guanine-n7 methyltransferase; PDBTitle: crystal structure of mrna cap guanine-n7 methyltransferase2 in complex with sah 48 c3e23A_ not modelled 99.7 15 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein rpa2492; PDBTitle: crystal structure of the rpa2492 protein in complex with2 sam from rhodopseudomonas palustris, northeast structural3 genomics consortium target rpr299 49 c3lccA_ not modelled 99.7 11 PDB header:transferase Chain: A: PDB Molecule:putative methyl chloride transferase; PDBTitle: structure of a sam-dependent halide methyltransferase from arabidopsis2 thaliana 50 d1tpya_ not modelled 99.7 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Mycolic acid cyclopropane synthase 51 c2g8nB_ not modelled 99.7 17 PDB header:transferase Chain: B: PDB Molecule:phenylethanolamine n-methyltransferase; PDBTitle: structure of hpnmt with inhibitor 3-hydroxymethyl-7-(n-4-2 chlorophenylaminosulfonyl)-thiq and adohcy 52 d1xtpa_ not modelled 99.7 10 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:AD-003 protein-like 53 c2iipD_ not modelled 99.7 20 PDB header:transferase Chain: D: PDB Molecule:nicotinamide n-methyltransferase; PDBTitle: human nicotinamide n-methyltransferase 54 d1y8ca_ not modelled 99.6 11 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:CAC2371-like 55 c3ocjA_ not modelled 99.6 18 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: the crystal structure of a possilbe exported protein from bordetella2 parapertussis 56 c3hnrA_ not modelled 99.6 13 PDB header:transferase Chain: A: PDB Molecule:probable methyltransferase bt9727_4108; PDBTitle: crystal structure of a probable methyltransferase2 bt9727_4108 from bacillus thuringiensis subsp. northeast3 structural genomics consortium target id bur219 57 d1ve3a1 not modelled 99.6 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:CAC2371-like 58 c3mq2A_ not modelled 99.6 10 PDB header:transferase Chain: A: PDB Molecule:16s rrna methyltransferase; PDBTitle: crystal structure of 16s rrna methyltranferase kamb 59 c3d2lC_ not modelled 99.6 15 PDB header:transferase Chain: C: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase (zp_00538691.1)2 from exiguobacterium sp. 255-15 at 1.90 a resolution 60 c3dtnA_ not modelled 99.6 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative methyltransferase mm_2633; PDBTitle: crystal structure of putative methyltransferase-mm_26332 from methanosarcina mazei . 61 c3sm3A_ not modelled 99.6 21 PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferases; PDBTitle: crystal structure of sam-dependent methyltransferases q8puk2_metma2 from methanosarcina mazei. northeast structural genomics consortium3 target mar262. 62 d1xvaa_ not modelled 99.6 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Glycine N-methyltransferase 63 c3jwgA_ not modelled 99.6 7 PDB header:transferase Chain: A: PDB Molecule:methyltransferase type 12; PDBTitle: crystal structure analysis of the methyltransferase domain2 of bacterial-cthen1-c 64 c3ggdA_ not modelled 99.6 11 PDB header:transferase Chain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase (yp_325210.1)2 from anabaena variabilis atcc 29413 at 2.11 a resolution 65 c3pfhD_ not modelled 99.6 12 PDB header:transferase Chain: D: PDB Molecule:n-methyltransferase; PDBTitle: x-ray crystal structure the n,n-dimethyltransferase tylm1 from2 streptomyces fradiae in complex with sah and dtdp-quip3n 66 c3g2qA_ not modelled 99.6 12 PDB header:transferase Chain: A: PDB Molecule:pcza361.24; PDBTitle: crystal structure of the glycopeptide n-methyltransferase mtfa2 complexed with sinefungin 67 c3g5tA_ not modelled 99.6 17 PDB header:transferase Chain: A: PDB Molecule:trans-aconitate 3-methyltransferase; PDBTitle: crystal structure of trans-aconitate 3-methyltransferase2 from yeast 68 d1im8a_ not modelled 99.6 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Hypothetical protein HI0319 (YecO) 69 c3gwzB_ not modelled 99.6 13 PDB header:transferase Chain: B: PDB Molecule:mmcr; PDBTitle: structure of the mitomycin 7-o-methyltransferase mmcr 70 c3e05B_ not modelled 99.6 17 PDB header:transferase Chain: B: PDB Molecule:precorrin-6y c5,15-methyltransferase (decarboxylating); PDBTitle: crystal structure of precorrin-6y c5,15-methyltransferase from2 geobacter metallireducens gs-15 71 c3opnA_ not modelled 99.5 13 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative hemolysin; PDBTitle: the crystal structure of a putative hemolysin from lactococcus lactis 72 c3i9fB_ not modelled 99.5 18 PDB header:transferase Chain: B: PDB Molecule:putative type 11 methyltransferase; PDBTitle: crystal structure of a putative type 11 methyltransferase2 from sulfolobus solfataricus 73 d1xcla_ not modelled 99.5 16 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Guanidinoacetate methyltransferase 74 c3m70A_ not modelled 99.5 10 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:tellurite resistance protein tehb homolog; PDBTitle: crystal structure of tehb from haemophilus influenzae 75 d1ri5a_ not modelled 99.5 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:mRNA cap (Guanine N-7) methyltransferase 76 d1wzna1 not modelled 99.5 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:CAC2371-like 77 c1z3cA_ not modelled 99.5 13 PDB header:transferase Chain: A: PDB Molecule:mrna capping enzyme; PDBTitle: encephalitozooan cuniculi mrna cap (guanine-n7)2 methyltransferasein complexed with azoadomet 78 c2pxxA_ not modelled 99.5 21 PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein mgc2408; PDBTitle: human putative methyltransferase mgc2408 79 c2ip2B_ not modelled 99.5 21 PDB header:transferase Chain: B: PDB Molecule:probable phenazine-specific methyltransferase; PDBTitle: structure of the pyocyanin biosynthetic protein phzm 80 d2bzga1 not modelled 99.5 11 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Thiopurine S-methyltransferase 81 d1fp1d2 not modelled 99.5 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 82 d1d2ha_ not modelled 99.5 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Glycine N-methyltransferase 83 c2r3sA_ not modelled 99.5 16 PDB header:transferase Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a putative o-methyltransferase (npun_r0239) from2 nostoc punctiforme pcc 73102 at 2.15 a resolution 84 d1zx0a1 not modelled 99.5 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Guanidinoacetate methyltransferase 85 c2p8jA_ not modelled 99.5 18 PDB header:transferase Chain: A: PDB Molecule:s-adenosylmethionine-dependent methyltransferase; PDBTitle: crystal structure of s-adenosylmethionine-dependent methyltransferase2 (np_349143.1) from clostridium acetobutylicum at 2.00 a resolution 86 c3g07C_ not modelled 99.5 17 PDB header:transferase Chain: C: PDB Molecule:7sk snrna methylphosphate capping enzyme; PDBTitle: methyltransferase domain of human bicoid-interacting protein2 3 homolog (drosophila) 87 c3cggB_ not modelled 99.5 19 PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of tehb-like sam-dependent methyltransferase2 (np_600671.1) from corynebacterium glutamicum atcc 13032 kitasato at3 2.00 a resolution 88 c3jwhA_ not modelled 99.5 7 PDB header:transferase Chain: A: PDB Molecule:hen1; PDBTitle: crystal structure analysis of the methyltransferase domain2 of bacterial-avhen1-c 89 c3mczB_ not modelled 99.5 12 PDB header:transferase Chain: B: PDB Molecule:o-methyltransferase; PDBTitle: the structure of an o-methyltransferase family protein from2 burkholderia thailandensis. 90 c3bxoA_ not modelled 99.5 10 PDB header:transferase Chain: A: PDB Molecule:n,n-dimethyltransferase; PDBTitle: crystal structure of streptomyces venezuelae desvi 91 c3p2kA_ not modelled 99.5 12 PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase 92 c3bgdB_ not modelled 99.5 14 PDB header:transferase Chain: B: PDB Molecule:thiopurine s-methyltransferase; PDBTitle: thiopurine s-methyltransferase 93 d1qzza2 not modelled 99.5 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 94 d1yzha1 not modelled 99.4 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TrmB-like 95 d1kyza2 not modelled 99.4 9 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 96 c3mtiA_ not modelled 99.4 9 PDB header:transferase Chain: A: PDB Molecule:rrna methylase; PDBTitle: the crystal structure of a rrna methylase from streptococcus2 thermophilus to 1.95a 97 d1dusa_ not modelled 99.4 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Hypothetical protein MJ0882 98 c3lstB_ not modelled 99.4 11 PDB header:transferase Chain: B: PDB Molecule:calo1 methyltransferase; PDBTitle: crystal structure of calo1, methyltransferase in calicheamicin2 biosynthesis, sah bound form 99 c3i53A_ not modelled 99.4 13 PDB header:transferase Chain: A: PDB Molecule:o-methyltransferase; PDBTitle: crystal structure of an o-methyltransferase (ncsb1) from2 neocarzinostatin biosynthesis in complex with s-adenosyl-l-3 homocysteine (sah) 100 c3dp7B_ not modelled 99.4 13 PDB header:transferase Chain: B: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of sam-dependent methyltransferase from bacteroides2 vulgatus atcc 8482 101 c3p9kD_ not modelled 99.4 13 PDB header:transferase Chain: D: PDB Molecule:caffeic acid o-methyltransferase; PDBTitle: crystal structure of perennial ryegrass lpomt1 complexed with s-2 adenosyl-l-homocysteine and coniferaldehyde 102 c1kyzC_ not modelled 99.4 11 PDB header:transferase Chain: C: PDB Molecule:caffeic acid 3-o-methyltransferase; PDBTitle: crystal structure analysis of caffeic acid/5-hydroxyferulic2 acid 3/5-o-methyltransferase ferulic acid complex 103 d1tw3a2 not modelled 99.4 11 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Plant O-methyltransferase, C-terminal domain 104 d1wg8a2 not modelled 99.4 20 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:MraW-like putative methyltransferases 105 c1yb2A_ not modelled 99.4 14 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ta0852; PDBTitle: structure of a putative methyltransferase from thermoplasma2 acidophilum. 106 d1yb2a1 not modelled 99.4 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:tRNA(1-methyladenosine) methyltransferase-like 107 c2pwyB_ not modelled 99.4 16 PDB header:transferase Chain: B: PDB Molecule:trna (adenine-n(1)-)-methyltransferase; PDBTitle: crystal structure of a m1a58 trna methyltransferase 108 c2yvlB_ not modelled 99.4 13 PDB header:transferase Chain: B: PDB Molecule:hypothetical protein; PDBTitle: crystal structure of trna (m1a58) methyltransferase trmi from aquifex2 aeolicus 109 c3dxyA_ not modelled 99.4 14 PDB header:transferase Chain: A: PDB Molecule:trna (guanine-n(7)-)-methyltransferase; PDBTitle: crystal structure of ectrmb in complex with sam 110 d2nxca1 not modelled 99.4 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Ribosomal protein L11 methyltransferase PrmA 111 c3dmgA_ not modelled 99.4 10 PDB header:transferase Chain: A: PDB Molecule:probable ribosomal rna small subunit methyltransferase; PDBTitle: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex2 with adohcy 112 d1vbfa_ not modelled 99.4 13 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Protein-L-isoaspartyl O-methyltransferase 113 c1xduA_ not modelled 99.3 19 PDB header:transferase Chain: A: PDB Molecule:protein rdmb; PDBTitle: crystal structure of aclacinomycin-10-hydroxylase (rdmb) in complex2 with sinefungin (sfg) 114 d1p1ca_ not modelled 99.3 15 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:Guanidinoacetate methyltransferase 115 c3giwA_ not modelled 99.3 18 PDB header:unknown function Chain: A: PDB Molecule:protein of unknown function duf574; PDBTitle: crystal structure of a duf574 family protein (sav_2177) from2 streptomyces avermitilis ma-4680 at 1.45 a resolution 116 d1m6ya2 not modelled 99.3 12 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:MraW-like putative methyltransferases 117 d2i6ga1 not modelled 99.3 14 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:TehB-like 118 d1o54a_ not modelled 99.3 18 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:tRNA(1-methyladenosine) methyltransferase-like 119 c3lecA_ not modelled 99.3 15 PDB header:structure genomics, unknown function Chain: A: PDB Molecule:nadb-rossmann superfamily protein; PDBTitle: the crystal structure of a protein in the nadb-rossmann2 superfamily from streptococcus agalactiae to 1.8a 120 c1fpqA_ not modelled 99.3 12 PDB header:transferase Chain: A: PDB Molecule:isoliquiritigenin 2'-o-methyltransferase; PDBTitle: crystal structure analysis of selenomethionine substituted chalcone o-2 methyltransferase

Binding site prediction

Due to computational demand, binding site predictions are not run for batch jobs

If you want to predict binding sites, please manually submit your model of choice to 3DLigandSite

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
If you use the binding site predictions from 3DLigandSite, please also cite:
3DLigandSite: predicting ligand-binding sites using similar structures.
Wass MN, Kelley LA and Sternberg MJ Nucleic Acids Research 38, W469-73 (2010) [PubMed]
© Structural Bioinformatics Group Imperial College London Lawrence Kelley, Benjamin Jefferys Disclaimer Terms and Conditions	Component software Template detection: HHpred 1.51 Secondary structure prediction: Psi-pred 2.5 Disorder prediction: Disopred 2.4 Transmembrane prediction: Memsat_SVM Multi-template modelling and ab initio: Poing 1.0