52 c2j289_ Probab=99.00   E-value=1.3e-08  Score=71.60  Aligned_columns=168  Identities=14%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCC
Q ss_conf             0899982888797899999999999988-995899805124886544465431468999873688870000441248873
Q batch____         3 KRFFITGTDTSVGKTVVSRALLQALASQ-GKTVAGYKPVAKGSKETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEE   81 (231)
Q Consensus         3 k~i~i~gt~~GvGKTtvs~~La~~La~~-G~rVl~vD~D~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~   81 (231)
                      ..|+++| =.|+||||+++.||.++..+ |++|+++.+|..         +......+...+..-............+. 
T Consensus       100 ~Vi~lvG-~~G~GKTTT~aKLA~~~~~k~gkkv~lv~~Dt~---------R~aA~eQLk~~a~~~gvp~~~~~~~~d~~-  168 (430)
T c2j289_         100 AVVLMAG-LQGAGKTTSVGKLGKFLREKHKKKVLVVSADVY---------RPAAIKQLETLAEQVGVDFFPSDVGQKPV-  168 (430)
T ss_dssp             CEEEEEC-SSSSSSTTTHHHHHHHHHTSSSCCCCBCCCCCS---------SSCSHHHHHHHHHHTTCCCCCCSSCCCTT-
T ss_pred             EEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCC---------CHHHHHHHHHHHHHHCCEEEECCCCCCHH-
T ss_conf             6999973-588762558999999999517980799973876---------63279999999997389168558847889-


Q ss_pred             CHHHCCCCCCHHHHHHHHHHH-HCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
Q ss_conf             212117117999999999996-2079899992886223321013568889985099838986134413899999999997
Q batch____        82 SSVAHSCPINYTLISNGLANL-TEKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA  160 (231)
Q Consensus        82 ~~~~~~~~~~~~~l~~~~~~l-~~~~d~viiD~~~~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~  160 (231)
                                 +.+.+.++.. ...||+|+||+++..........-...+.........+.+.+....-.+.........
T Consensus       169 -----------~i~~~ai~~a~~~~~DvIlIDTAGR~~~d~~l~~EL~~i~~~~~p~e~lLVlda~~gq~~~~~a~~F~~  237 (430)
T c2j289_         169 -----------DIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNE  237 (430)
T ss_dssp             -----------HHHHHHHHHHHHTTCSCEEEEECCCCSSHHHHHHHHHHHHHHHCCSEEEEEEETTTGGGGHHHHHHHHT
T ss_pred             -----------HHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH
T ss_conf             -----------999999999986699899980898979998999999999841486509998505686789999999974


Q ss_pred             CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
Q ss_conf             389928999841236871256999999999719989
Q batch____       161 NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPL  196 (231)
Q Consensus       161 ~~~~~~~g~v~n~~~~~~~~~~~~~~~~~~~~~~~v  196 (231)
                      ..+.  .|+|++++++....-..+  .+...++.|+
T Consensus       238 ~~~~--~giIlTKlD~~argG~aL--S~~~~t~~PI  269 (430)
T c2j289_         238 ALPL--TGVVLTKVDGDARGGAAL--SIRHITGKPI  269 (430)
T ss_dssp             TCSS--CEEEEECSSSCSCCTHHH--HHHHTTTCCB
T ss_pred             CCCC--CEEEEECCCCCCCHHHHH--HHHHHHCCCE
T ss_conf             1899--759996344678268999--9999847988