43 c1vmaA_ Probab=99.25   E-value=2.4e-09  Score=76.12  Aligned_columns=171  Identities=13%

Q ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCC
Q ss_conf             08999828887978999999999999889958998051248865444654314689998736888700004412488732
Q batch____         3 KRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGSKETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEES   82 (231)
Q Consensus         3 k~i~i~gt~~GvGKTtvs~~La~~La~~G~rVl~vD~D~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~   82 (231)
                      +.|+++|+ .||||||+++.||.+++++|+||+++++|..         .......+...+..-............+.  
T Consensus        93 ~vi~~~Gp-~G~GKTTt~aklA~~~~~~g~~v~li~~D~~---------R~gA~eQL~~~a~~~~v~~~~~~~~~~~~--  160 (294)
T c1vmaA_          93 FVIMVVGV-NGTGKTTSCGKLAKMFVDEGKSVVLAAADTF---------RAAAIEQLKIWGERVGATVISHSEGADPA--  160 (294)
T ss_dssp             EEEEEECC-TTSSHHHHHHHHHHHHHHTTCCEEEEEECTT---------CHHHHHHHHHHHHHHTCEEECCSTTCCHH--
T ss_pred             EEEEEEEC-CCCCHHHHHHHHHHHHHHCCCCEEEEECCCC---------CHHHHHHHHHHHHHHCCEEEECCCCCCHH--
T ss_conf             69999806-8876024899999999967994899975876---------86479999999976198289748836989--


Q ss_pred             HHHCCCCCCHHHHHHHHHHHH-CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCC------CCEEEEEECCCCHHHHHHHH
Q ss_conf             121171179999999999962-07989999288622332101356888998509------98389861344138999999
Q batch____        83 SVAHSCPINYTLISNGLANLT-EKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQ------LPVLMVVGIQEGCINHALLT  155 (231)
Q Consensus        83 ~~~~~~~~~~~~l~~~~~~l~-~~~d~viiD~~~~~~~~~~~~~~~a~~~~~~~------~~~~~v~~~~~~~~~~~~~~  155 (231)
                                +.+.+.+.... ++||+|+||+++..........-...+.....      ....+.+-+....-.+....
T Consensus       161 ----------~~~~~~~~~~~~~~~d~IlIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~  230 (294)
T c1vmaA_         161 ----------AVAFDAVAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGLVQA  230 (294)
T ss_dssp             ----------HHHHHHHHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHHHHH
T ss_pred             ----------HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHH
T ss_conf             ----------9999999999977998999818889878579999999999996303566885399981146878999999


Q ss_pred             HHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             99997389928999841236871256999999999719989999
Q batch____       156 AQAIANDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGE  199 (231)
Q Consensus       156 ~~~~~~~~~~~~g~v~n~~~~~~~~~~~~~~~~~~~~~~~vlg~  199 (231)
                      ....+..+.  .++|++++++....-..+  .+...++.|+..+
T Consensus       231 ~~~~~~~~~--~~iIlTKlDe~~~~G~~l--~~~~~~~~Pi~~i  270 (294)
T c1vmaA_         231 KIFKEAVNV--TGIILTKLDGTAKGGITL--AIARELGIPIKFI  270 (294)
T ss_dssp             HHHHHHSCC--CEEEEECGGGCSCTTHHH--HHHHHHCCCEEEE
T ss_pred             HHHHHCCCC--CEEEEECCCCCCCHHHHH--HHHHHHCCCEEEE
T ss_conf             999630899--769997444788557999--9999857988999