BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (477 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 T... 986 0.0 UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax... 845 0.0 UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Ta... 416 e-115 UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 395 e-108 UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Phot... 338 2e-91 UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grim... 328 4e-88 UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 318 2e-85 UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibr... 316 1e-84 UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 314 5e-84 UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 311 4e-83 UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 309 1e-82 UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 306 9e-82 UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibr... 297 5e-79 UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 295 3e-78 UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 290 9e-77 UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio ... 288 3e-76 UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 262 2e-68 UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 262 2e-68 UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 257 5e-67 UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella ... 252 2e-65 UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 240 8e-62 UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 232 2e-59 UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 231 3e-59 UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 218 4e-55 UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 213 9e-54 UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B;... 213 1e-53 UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B;... 212 2e-53 UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 212 3e-53 UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 196 2e-48 UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1... 184 7e-45 UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 173 1e-41 UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 169 2e-40 UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 165 4e-39 UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 164 5e-39 UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Ta... 164 7e-39 UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 160 1e-37 UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 156 2e-36 UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 155 3e-36 UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 152 3e-35 UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 149 3e-34 UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candida... 148 4e-34 UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 T... 147 9e-34 UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 146 2e-33 UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 146 2e-33 UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Baci... 145 3e-33 UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 145 3e-33 UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 143 1e-32 UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 143 1e-32 UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 143 1e-32 UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 142 2e-32 UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bact... 142 2e-32 UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 140 2e-31 UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 139 2e-31 UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 139 3e-31 UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 139 3e-31 UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ocea... 138 4e-31 UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1... 138 4e-31 UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax... 137 1e-30 UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 136 2e-30 UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 136 2e-30 UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax... 135 2e-30 UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 135 3e-30 UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 135 3e-30 UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 134 7e-30 UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 134 9e-30 UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 134 9e-30 UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 134 1e-29 UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fuso... 133 1e-29 UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 131 5e-29 UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 131 5e-29 UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 131 5e-29 UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 130 7e-29 UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 130 8e-29 UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 130 1e-28 UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 128 4e-28 UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkhol... 128 4e-28 UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisel... 128 5e-28 UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, pepti... 127 6e-28 UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 127 7e-28 UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillu... 127 7e-28 UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 126 2e-27 UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acar... 126 2e-27 UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxal... 126 2e-27 UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 125 3e-27 UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 125 3e-27 UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 125 3e-27 UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 125 5e-27 UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 124 6e-27 UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 123 1e-26 UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candida... 123 1e-26 UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 123 2e-26 UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 123 2e-26 UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 122 2e-26 UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 122 4e-26 UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenel... 121 5e-26 UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family ... 121 5e-26 UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax... 121 6e-26 UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 120 8e-26 UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 120 8e-26 UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 119 2e-25 UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 119 2e-25 UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 119 2e-25 UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 119 2e-25 UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acti... 119 2e-25 UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type... 119 3e-25 UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 118 6e-25 UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 117 9e-25 UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria ... 117 9e-25 UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocyst... 117 1e-24 UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acid... 117 1e-24 UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolys... 116 1e-24 UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 116 2e-24 UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 116 2e-24 UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 115 4e-24 UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 115 4e-24 UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 114 5e-24 UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptida... 114 8e-24 UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 114 9e-24 UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 113 1e-23 UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-a... 112 2e-23 UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) fami... 112 3e-23 UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 famil... 110 9e-23 UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flav... 110 1e-22 UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 110 1e-22 UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces R... 110 1e-22 UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine c... 110 2e-22 UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 110 2e-22 UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5... 109 2e-22 UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 109 2e-22 UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 109 2e-22 UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 109 2e-22 UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ther... 108 3e-22 UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 108 4e-22 UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 108 4e-22 UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 108 5e-22 UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porp... 108 5e-22 UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 108 6e-22 UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 108 6e-22 UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 107 8e-22 UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1... 107 9e-22 UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 107 1e-21 UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 107 1e-21 UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 105 4e-21 UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 105 4e-21 UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase ... 104 6e-21 UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 104 7e-21 UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 104 7e-21 UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precurs... 103 2e-20 UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 102 3e-20 UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 102 4e-20 UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 101 5e-20 UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 101 6e-20 UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 101 7e-20 UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 100 2e-19 UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 100 2e-19 UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 99 3e-19 UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alca... 99 4e-19 UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 99 4e-19 UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flav... 97 1e-18 UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 96 4e-18 UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvula... 94 1e-17 UniRef50_C9PY01 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Prev... 94 1e-17 UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 93 2e-17 UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 93 3e-17 UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 92 3e-17 UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 92 4e-17 UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 92 5e-17 UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 92 5e-17 UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1... 91 8e-17 UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 91 1e-16 UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 89 3e-16 UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 89 4e-16 UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 89 5e-16 UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 88 8e-16 UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 87 1e-15 UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 87 2e-15 UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 86 4e-15 UniRef50_UPI0000382F06 COG2027: D-alanyl-D-alanine carboxypeptid... 84 9e-15 UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Co... 84 1e-14 UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 84 1e-14 UniRef50_D0WMC5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 84 2e-14 UniRef50_Q2J4Y5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 83 2e-14 UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 83 2e-14 UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 83 3e-14 UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alan... 82 3e-14 UniRef50_C7PWZ8 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 82 3e-14 UniRef50_C8RSC7 PBP4 family D-alanyl-D-alanine carboxypeptidase,... 82 3e-14 UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 82 5e-14 UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=... 81 8e-14 UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Cory... 81 9e-14 UniRef50_A0R596 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 81 1e-13 UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type... 80 1e-13 UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alan... 80 1e-13 UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thi... 80 1e-13 UniRef50_A8LF22 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 80 2e-13 UniRef50_D2PYA1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 80 2e-13 UniRef50_D1Y0J6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 80 2e-13 UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 79 3e-13 UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1... 78 9e-13 UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_A0LRB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_A1SDU6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_A7HML0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_C5VM55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 1e-12 UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2... 77 1e-12 UniRef50_D1QRI9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 77 2e-12 UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Co... 76 3e-12 UniRef50_C8NYS1 Penicillin-binDing protein, d-ala-d-ala carboxyp... 75 4e-12 UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alan... 75 6e-12 UniRef50_A8ZL72 D-alanyl-D-alanine carboxypeptidase, putative n=... 75 7e-12 UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 75 8e-12 UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 74 8e-12 UniRef50_C9Z722 Putative carboxypeptidase n=2 Tax=Streptomyces R... 74 1e-11 UniRef50_A7BBM9 Putative uncharacterized protein n=1 Tax=Actinom... 74 2e-11 UniRef50_UPI000185C037 D-alanyl-D-alanine carboxypeptidase/D-ala... 74 2e-11 UniRef50_A4F6R6 Putative uncharacterized protein n=1 Tax=Sacchar... 72 3e-11 UniRef50_A5CPH1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Micr... 72 4e-11 UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax... 72 4e-11 UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 72 4e-11 UniRef50_Q3AXV2 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 72 5e-11 UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 72 6e-11 UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 72 6e-11 UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 71 7e-11 UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 ... 71 1e-10 UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 71 1e-10 UniRef50_D1Y9P2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 71 1e-10 UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=De... 70 1e-10 UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 70 1e-10 UniRef50_B4VYN4 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 70 2e-10 UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 70 2e-10 UniRef50_UPI0001B4DBAD D-alanyl-D-alanine carboxypeptidase n=5 T... 70 2e-10 UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 70 3e-10 UniRef50_D1A551 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 69 3e-10 UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase ... 69 3e-10 UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 69 4e-10 UniRef50_B9XI94 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 69 6e-10 UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 68 6e-10 UniRef50_B4VC16 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Stre... 68 7e-10 UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 68 9e-10 UniRef50_C2KSC9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 68 9e-10 UniRef50_D2NQQ1 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Roth... 68 9e-10 UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 67 1e-09 UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 67 2e-09 UniRef50_A5CSQ9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Clav... 67 2e-09 UniRef50_B0CEL8 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acar... 66 2e-09 UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxyp... 66 3e-09 UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 66 3e-09 UniRef50_A9BIW7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 66 3e-09 UniRef50_B4VTW2 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 65 4e-09 >UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 Tax=Gammaproteobacteria RepID=DACB_ECOLI Length = 477 Score = 986 bits (2548), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP Sbjct: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV Sbjct: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS Sbjct: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE Sbjct: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK Sbjct: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS Sbjct: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS Sbjct: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN Sbjct: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 >UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax=Enterobacteriaceae RepID=C9XU16_CROTZ Length = 478 Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust. Identities = 396/477 (83%), Positives = 444/477 (93%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRF +GLT+ +A + AANV+EYI QLPAGANLALMVQKVGAS+P ID+HSQQMALP Sbjct: 2 MRFSRFAVGLTTSVALNASAANVEEYINQLPAGANLALMVQKVGASSPEIDFHSQQMALP 61 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAAL+QLGPD+RFTTTLE++G+V +GVL GDL+ARF DPT KRQD+RNMV Sbjct: 62 ASTQKVITALAALLQLGPDYRFTTTLESRGDVRDGVLDGDLIARFTGDPTFKRQDMRNMV 121 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LKK+GV QI GNVLIDTS FASHDKAPGWPWNDMTQCFSAPP+AAIVDRNCFSVSLYS Sbjct: 122 TALKKAGVQQIKGNVLIDTSAFASHDKAPGWPWNDMTQCFSAPPSAAIVDRNCFSVSLYS 181 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 AP+ G+ AF+R+ASYYPVT++SQV+TLPRGS+EAQYCELDVV GDLNR+TLTGC+ QR++ Sbjct: 182 APQAGEPAFVRIASYYPVTVYSQVKTLPRGSSEAQYCELDVVTGDLNRYTLTGCMTQRAD 241 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFA+QDGA YAGAILK ELKQAGIT++GTLLRQTQ NEPGTV+AS+QS PLHDLL+ Sbjct: 242 PLPLAFAIQDGAGYAGAILKAELKQAGITYNGTLLRQTQPNEPGTVIASRQSPPLHDLLR 301 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 +MLKKSDNMIADTVFR IG + VPGTWRAGSDAVRQILRQ+AGVD+GNTI+ DGSGLS Sbjct: 302 VMLKKSDNMIADTVFRTIGRNFYGVPGTWRAGSDAVRQILRQKAGVDLGNTIVVDGSGLS 361 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIA++D++LNFISMLPLAG+DGSL YRAGLH+AGVDGKVSAKTGS Sbjct: 362 RHNLIAPATMMQVLQYIARNDSQLNFISMLPLAGHDGSLLYRAGLHEAGVDGKVSAKTGS 421 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEP DQRNRRIPLVRFESRLY+D+YQNN Sbjct: 422 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPTDQRNRRIPLVRFESRLYRDLYQNN 478 >UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Tax=Pasteurellaceae RepID=DACB_HAEIN Length = 479 Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust. Identities = 200/454 (44%), Positives = 306/454 (67%), Gaps = 4/454 (0%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 NV + +LP G+N+ + + + + DY+ L ASTQKV TA+AA + L F+ Sbjct: 29 NVSDLTQKLPEGSNVGFIAKNINQNQIIADYNGSTFMLSASTQKVFTAVAAKLALDDQFQ 88 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T L + G ++NG L G+L+ RF DP L R + +++A LKK G+ +I+G++++DTS+ Sbjct: 89 FETALLSNGKIQNGNLDGNLIVRFTGDPDLTRGQLYSLLAELKKQGIKKINGDLVLDTSV 148 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F+SHD+ GW WND+T CF++PPAAA +D NCF L + PG++ I V + +P+ +F Sbjct: 149 FSSHDRGLGWIWNDLTMCFNSPPAAANIDNNCFYAELDANKNPGEIVKINVPAQFPIQVF 208 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 QV S EA YC+LDVV D NR+ + GCL ++ +P L+FAVQ+ +YA I++ Sbjct: 209 GQVYV--ADSNEAPYCQLDVVVHDNNRYQVKGCLARQYKPFGLSFAVQNTDAYAAEIIQR 266 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 +L+Q GI ++G +L Q + G ++A S PL DLLK M+KKSDN IAD++FR + Sbjct: 267 QLRQLGIEFNGKVLL-PQKPQQGQLLAKHLSKPLPDLLKKMMKKSDNQIADSLFRAVAFN 325 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 + P +++ G+ AV+ IL++Q G+ GN+I+ADGSGLSRHNL+AP TM+ VL+YIA+++ Sbjct: 326 YYKRPASFQLGTLAVKSILQKQ-GIRFGNSILADGSGLSRHNLVAPKTMLSVLEYIAKNE 384 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 ++L+ + P+AG DG++ R GL + V AKTGSL+GVYNLAGF+T A G+++AF Sbjct: 385 DKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKGVYNLAGFMTNARGEKVAF 444 Query: 442 VQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 VQ+++GY+ + + +R PLV+FE LY ++Y+ Sbjct: 445 VQFINGYSTGDLESKTKRAPLVQFERNLYNELYK 478 >UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQB2_9PAST Length = 489 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 193/460 (41%), Positives = 296/460 (64%), Gaps = 3/460 (0%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 F+ + +V LP G + +++ + + + ++ + LPASTQKV+TAL A + Sbjct: 32 FAYTSVDVSSLNQVLPDGTSSSVIAKNLTRNEIIAEHQANTFMLPASTQKVLTALTAKLA 91 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 L +FRF T+L T G V+ LKGDL+ RF DP L + N++A LKK + +I GN+ Sbjct: 92 LSDEFRFETSLLTNGKVQGNTLKGDLIVRFTGDPDLTSGQLSNLLAQLKKQKITKITGNL 151 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 ++DT++F SHD+ GW WND+T CF+APPAA +D NCF + L + G+ I + + Sbjct: 152 ILDTAVFTSHDRGLGWIWNDLTMCFNAPPAAVNIDNNCFYLELDANQAIGESVKINIPAQ 211 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 YPV +F QV + EA YC+LDV+ D NR+ + GCL ++++P L+FA+QD ++Y Sbjct: 212 YPVQVFGQVYVASQ--QEAPYCQLDVMVNDNNRYQVKGCLARQNKPFGLSFAIQDPSAYG 269 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 A+++ +LK+ GI ++G + + + + G ++A S PL DL+K M+KKSDN IAD +F Sbjct: 270 AAMIQRQLKRLGIEFNGKV-QTPLMQQKGQLLAQHFSKPLPDLIKKMMKKSDNQIADALF 328 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 R + + P +++ GS A+RQIL +AG+ + N+IIADGSGLSRHNLI+ M+QVL Sbjct: 329 RSVAFHYYKRPASFQLGSQAMRQILHSKAGIKLSNSIIADGSGLSRHNLISANLMLQVLD 388 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 YIA+++ L + P+AG DG+L R L + V AKTG+L+GVYNLAGF+T + Sbjct: 389 YIAKNEATLKLMDSFPIAGVDGTLSGRGSLINPPLVKNVIAKTGALKGVYNLAGFMTNSR 448 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 + +AFVQ+++GY+ + + +R PLV+FES LY +Y+ Sbjct: 449 NETLAFVQFINGYSTGDFESKTKRAPLVQFESGLYNTLYK 488 >UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Photobacterium RepID=D0YZY0_LISDA Length = 464 Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 172/466 (36%), Positives = 272/466 (58%), Gaps = 18/466 (3%) Query: 10 LTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 L + AF+ QAA I +LP G +LAL+++ + + PASTQK ITA Sbjct: 15 LPTLAAFNPQAA-----IAKLPQGHDLALLIKDPATGKIIYQQRTDNLQAPASTQKTITA 69 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 LAA + LG +FRF T +ETKG D++ F DPT R D+R +++ +K G Sbjct: 70 LAAKLYLGDNFRFYTDVETKGK--------DIIFNFSGDPTFSRTDLRELLSQIKAKGYK 121 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 I GN+ ++ F +++ GWPW+ + C+SAP ++ ++ NC +LY+ G+ A Sbjct: 122 SIQGNIYLNGGHFTGYERGIGWPWDILGSCYSAPSSSITLEHNCVQGALYTNKGIGNKAR 181 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 I V S+ P+ + S + +AQ+C+LD++ N + ++GC EP+PL FAVQ Sbjct: 182 INVPSHQPIQVTSTATIVTPSQKKAQFCQLDLISNPNNSYQVSGCSLAYKEPMPLKFAVQ 241 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + Y A+++ ELK+AGI++ G + R + G +A S P+ +LL IMLK+SDN+ Sbjct: 242 NTTKYTMAVMRQELKRAGISFKGQIYRNDTIK--GQRIARNSSKPMSELLDIMLKRSDNL 299 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 AD + + IG + PG++ G A+++IL+ +A +D+ +TI+ DGSGLSR+N ++ Sbjct: 300 FADNIAKTIGAKYYQQPGSYNNGVAAIKEILKTKANIDLSDTIMVDGSGLSRNNRLSAND 359 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 +MQV+ YI +H N L P+AG G+L+YR + + GKV AK+GSL YNLAG Sbjct: 360 LMQVITYIYKHKN-LKLFDDFPVAGESGTLRYRKSMRAGELKGKVIAKSGSLFATYNLAG 418 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 I T SG+ + F+Q ++ Y P ++ P+ +FE +LY+ +YQ Sbjct: 419 MIKTKSGKPLLFIQLVTDY--HPINKTKGLPPISQFEQKLYQSLYQ 462 >UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I802_VIBHO Length = 471 Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 180/469 (38%), Positives = 272/469 (57%), Gaps = 15/469 (3%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 I L ++F+ A +++ LPAG+ LAL V A A + + PASTQK Sbjct: 5 LIFFLLLPLSFATSAVPLNKIEAMLPAGSQLALSVYDASARAKIVSVDDDILLPPASTQK 64 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 V+TALAA + L PDF F TTL G + DLV F DPTL R DIR +++ LK Sbjct: 65 VVTALAATLSLPPDFTFDTTL--------GQVGQDLVFTFSGDPTLTRNDIRLLISALKA 116 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP-KP 184 G+ I G++ +D SIF+ H++A GWPW+ + C+SAP +A ++RNC ++YS +P Sbjct: 117 KGIQHIRGDIWLDGSIFSGHERAVGWPWDILGVCYSAPSSAIALERNCVQGAIYSEKNQP 176 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 F V + PV + + + + E C+L++ N + L+GCL RS PLPL Sbjct: 177 HTRVF--VPEHQPVKVTTDAMAVTQSQQEQSLCDLELHYDSNNHYQLSGCLAHRSTPLPL 234 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 FA+Q+ Y IL+ ELK A I G + + T++A +S LL+ MLK Sbjct: 235 KFAIQNPQKYVQDILQAELKTAAIIVDGKI-KTGSPTGTRTLLAKHRSDNRDALLETMLK 293 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +SDN+IAD + ++IGH +N PGT+ G+ A++ IL ++ G+D+ + +I DGSGLSR+N Sbjct: 294 RSDNLIADNLLKIIGHRYYNQPGTFANGAAAIKAILLEKTGIDLTHAVIVDGSGLSRNNR 353 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 + + +M VLQY+ H +L ++MLP++G DG+L+YRA + A + ++ AKTGSL G Sbjct: 354 MTASQLMDVLQYVYAHP-QLGLLAMLPVSGVDGTLKYRASVRHAPLKQRLIAKTGSLYGS 412 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQR--NRRIPLVRFESRLYK 471 YNLAG + G+ + VQ ++ Y + + R N P+ +FE LY+ Sbjct: 413 YNLAGVLKNDLGKDLLVVQLVTNYHIPETEDRPDNVASPITQFERELYQ 461 >UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB78_TOLAT Length = 484 Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 195/484 (40%), Positives = 291/484 (60%), Gaps = 25/484 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 F+ F+ LT C S QAA +P G+ +AL ++ G+ + A YH +PAS Sbjct: 9 FAIFLSVLTVC---SAQAA------ISVPEGSRIALAFKEPGSDSVAA-YHGDTFMIPAS 58 Query: 63 TQKVITALAALIQLGPDFRFTT-TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 TQK++TALAA + GPD++F T L KG ++NGVL GDLV F P L RQ + N++A Sbjct: 59 TQKLLTALAASLYFGPDWQFKTRMLAPKGAIQNGVLNGDLVLEFDGAPDLTRQALVNLLA 118 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 LK+ V QI+G++L+D S + +D GW WND+ CF+AP +A ++DRNC L A Sbjct: 119 YLKQQKVTQINGDILLDVSGYGGYDHGDGWSWNDLPICFTAPASAVVIDRNCVFAQL-KA 177 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY---CELDVVPGDLNRFTLTGCLPQR 238 + G +A + + P+T+ S+ R + + +Y C+L V N + LTGC+PQ+ Sbjct: 178 NQLGAIAEPIIPAGQPITITSEARVV----TQQEYYSGCDLRVDMNSSNNYHLTGCIPQQ 233 Query: 239 S-EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 S +P PL+FA+ D ++ ++ ++A I +G + + + +A SAPL Sbjct: 234 SGKPWPLSFAITDPTAWGVELVSWAARRADINLTGQVKAVRHIPDNLVELAHVPSAPLKK 293 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 LL MLK+SDN+IAD++ R +GH ++ AG+DAVR IL+ +AG+D+G+ ++ADGS Sbjct: 294 LLDRMLKRSDNLIADSLSRALGHYYLKRAASYAAGADAVRGILKNKAGIDLGSALLADGS 353 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLS HNLI M++VL Y+A HD+EL I +LP+AG G+L R + + V+AK Sbjct: 354 GLSAHNLITAKQMLEVLDYMALHDDELKLIGLLPVAGMSGTLGSRGSVQNPPLVKNVTAK 413 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ---RNRRI--PLVRFESRLYKD 472 TG+LQ V NLAGFITTASG+R AFV +G P+ + + RI P +FE ++ + Sbjct: 414 TGTLQNVSNLAGFITTASGKRKAFVLMANGLTFPPSVRQALKAHRIASPHYKFERQILEQ 473 Query: 473 IYQN 476 IY+ Sbjct: 474 IYRE 477 >UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibrio RepID=D0M7Y1_VIBSE Length = 473 Score = 316 bits (809), Expect = 1e-84, Method: Compositional matrix adjust. Identities = 167/447 (37%), Positives = 266/447 (59%), Gaps = 13/447 (2%) Query: 30 LPAGANLALMVQKVGASAPAIDYH-SQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 LP G+ ++L+ +K+ +A H ++Q+ PAST K++TALAA ++LG +FRF T LE Sbjct: 27 LPEGSRISLVAEKLSENAELDGVHPTEQLFPPASTLKIVTALAAKLELGDNFRFRTKLEA 86 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 + D V F DPTL+ D+++++ KK+G+ +IDG++ +D S F +++A Sbjct: 87 SSS--------DAVIYFVGDPTLQTNDLKSLLTLAKKNGLKRIDGDLWLDNSAFTGYNRA 138 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 GWPW+ + C+SAP + ++ NC S+Y+ G + V + P+ + S V T+ Sbjct: 139 VGWPWDILGVCYSAPASTITLNNNCVQASIYTQKDGGTRVY--VPEHQPIRVTSTVETVS 196 Query: 209 RGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 + ++++C+L +V N + LTGCL +R +PLPL FAVQD Y L LKQ I Sbjct: 197 KTIKKSRHCDLGLVANPDNNYKLTGCLVERDKPLPLKFAVQDPELYTSHRLAALLKQLNI 256 Query: 269 TWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT 328 SG + + + ++A QS L D+L+ MLK SDN+IADT+ + +G F G+ Sbjct: 257 ELSGKIRIGSAPEKQRKLIAMHQSEALTDILEEMLKNSDNLIADTLTKTLGAKFFVQSGS 316 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 + G++A++QI+ G+DI N + DGSGLSR+N I+ M ++L+YI QH++EL I+ Sbjct: 317 FANGTEAIKQIIFANTGIDIRNARLEDGSGLSRNNRISATKMAEILRYIWQHEDELKLIA 376 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ-RMAFVQYLSG 447 ++P +G G+L+YR + + + G++ AK+GSL G YN+AG+ +GQ FVQ++S Sbjct: 377 IMPKSGESGTLKYRQSMRKLPIKGQLIAKSGSLYGTYNMAGYGLDKNGQPNTVFVQFVSD 436 Query: 448 YAVEPADQRNRRI-PLVRFESRLYKDI 473 Y E D I P+ FE Y DI Sbjct: 437 YFPEKRDDNKPVIAPITHFEQLFYSDI 463 >UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=45 Tax=Vibrionaceae RepID=A5F933_VIBC3 Length = 487 Score = 314 bits (804), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 168/460 (36%), Positives = 269/460 (58%), Gaps = 28/460 (6%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 T+LP GA +L+++ V ++ ++ PASTQK++TALAA ++LG FRF T L Sbjct: 39 TKLPQGARYSLLIEDVALQQNTLELNTHLYYPPASTQKILTALAAKLELGDKFRFHTDLM 98 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 G D + RF DPTL D+ ++ +K +I+G++ +D S+F+ +++ Sbjct: 99 RSGQ--------DWIIRFSGDPTLTTADLTTLLKAMKAQSGGRIEGDLWLDNSVFSGYER 150 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 A GWPW+ + C+SAP +A +D NC S+Y+ P+ + V +YPV + SQ ++ Sbjct: 151 AVGWPWDILGVCYSAPASAINLDANCIQASIYTEPQGKTRVY--VPEHYPVHVQSQAISV 208 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 + E+ C+L++ N +TL GCL R +PLPL FAVQD Y ++ L Q Sbjct: 209 TQSEQESLLCDLELTATPENHYTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLN 268 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 I G + + +AS S PL LLK ML++SDN+IADT+ + +GH ++ PG Sbjct: 269 IELKGKIKVGKANTKQAQKIASHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQPG 328 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 ++ G+ A++QI + G+ + +T +ADGSGLSR+N + P M++ L+Y+ QH+ EL I Sbjct: 329 SFTNGTQAIKQIFYSRTGISLEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLI 388 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ-RMAFVQYLS 446 +MLP AG G+LQYR + + G++ AK+GSL G YN+AGF+ + + + FVQ+++ Sbjct: 389 AMLPSAGESGTLQYRRSMRAPQISGQIKAKSGSLYGTYNMAGFVMDENQRPKTLFVQFVT 448 Query: 447 GY---------AVEPADQRNRRIPLVRFESRLYKDIYQNN 477 Y AVEP P+++FE++LY+++ Q N Sbjct: 449 DYFPPRSNPEVAVEP--------PIIQFETQLYQELIQFN 480 >UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Moritella sp. PE36 RepID=A6F7V3_9GAMM Length = 464 Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 172/457 (37%), Positives = 271/457 (59%), Gaps = 24/457 (5%) Query: 30 LPAGANLALMV-------QKVGASAPAIDYHSQQMAL-PASTQKVITALAALIQLGPDFR 81 LP+G N+A ++ +KV S AI H+ ++ L PASTQK++TAL A + L ++ Sbjct: 15 LPSGTNVAYIIGQPFTATEKV--SHNAISQHNAELLLTPASTQKLLTALTAKLYLTDEYI 72 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T+L G++ + ++ F DPT R D+R+M+ LK SG+ +I G++ ++ S Sbjct: 73 FNTSLH--GSISKQSI-SEMEFNFTGDPTFSRDDLRDMLKRLKASGITKISGDITLNQSR 129 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM--AFIRVASYYPVT 199 F ++ G WND C++ +A +++ NC L + + D+ A I + Y P+ Sbjct: 130 FNGYNWGNGQVWNDQAVCYATQASALVINNNCV---LGNLRRSADLKKATIYIPEYEPII 186 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + SQV + + +AQ+C+L+V+ N +TL GC+ LPL+FA+ D SY A+L Sbjct: 187 LTSQVDIISKEQQQAQFCDLEVIRHPNNNYTLFGCITPSKRNLPLSFAISDPVSYFTALL 246 Query: 260 KDELKQAGITWSGTLLRQTQ-VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 EL QA I ++G ++ + VN V+ + QS PL D++ M+K+SDN+IAD +F+ I Sbjct: 247 NAELAQANIEFTGNVVESFKTVNT--AVIVNHQSPPLADIITEMMKESDNLIADILFKTI 304 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 G F PG +R G+ A+R+IL + G+ + + +IADGSGLSRHNL++ TM VL+YI Sbjct: 305 GAEYFQQPGNYRNGAKAMREILADE-GLSLASNVIADGSGLSRHNLVSAQTMFNVLEYII 363 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 HD+EL + +P++G DG+LQYR GL + GKV AKTGSL+G+ NL G + T Sbjct: 364 SHDDELQLLKTMPISGVDGTLQYRRGLLTKKLTGKVVAKTGSLKGLSNLVGIVKTEKNHM 423 Query: 439 MAFVQYLSGYAVEP--ADQRNRRIPLVRFESRLYKDI 473 + FV +SGY +P AD+ + PL ++ + + I Sbjct: 424 VPFVLMVSGYNPQPRDADKPKQPSPLTQYSAAFFNTI 460 >UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2B8_9GAMM Length = 465 Score = 309 bits (792), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 159/448 (35%), Positives = 258/448 (57%), Gaps = 15/448 (3%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 LP G+ +++V + + +++ S + PAS QK++TALAA +QLG DF FTT +E K Sbjct: 33 LPTGSEASILVVESNTNKTLLNHRSDTLRPPASVQKLVTALAATLQLGTDFTFTTDIEAK 92 Query: 90 GNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 D++ RF DP+L+R +IR +VA LK+ + I GNV ++ S F ++A Sbjct: 93 DQ--------DVIFRFSGDPSLRRDNIRQLVARLKRDR-SVIRGNVYLNGSAFNEFERAD 143 Query: 150 GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 GWPW+++ C+SAP ++ +D NC + K ++ P+ + + L Sbjct: 144 GWPWDNLGVCYSAPASSISLDDNCAVAKMVFKDKESTKLGFEISRDAPINIIENLDLLD- 202 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 E +YC ++ + N+F L GC+ + P L+FA+Q+ Y +++ EL+ AGI Sbjct: 203 -GLEKRYCNFKLLADNTNQFKLGGCIGRHEIPRFLSFAIQNTELYVAEMIRRELEHAGIE 261 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 G ++R + G V+A +SA L L+ M+K SDN+IAD + + IG FN PG++ Sbjct: 262 LQGNIIRNDRA--EGKVIARHESASLPVLIDEMVKDSDNLIADNLLKTIGRHYFNEPGSF 319 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G A++ +L+QQAG+D ++ADGSGLSR+N + +MQ+LQY+ H ELN ++ Sbjct: 320 DNGVAAIKAVLKQQAGIDFSAAVLADGSGLSRNNRMTTHHIMQILQYVYSHP-ELNLMAA 378 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 + ++G G+L+YR L + V KTGSL G +N+AG +T +G+ + FVQ ++ Y Sbjct: 379 MAVSGKSGTLRYRYSLRTDELRNNVKGKTGSLFGTFNIAGVLTAKTGKDLLFVQLVTNYH 438 Query: 450 VEPADQRNRRIPLVRFESRLYKDIYQNN 477 P R+ + + RFE +LY+ +Y NN Sbjct: 439 -HPDFHRHEKREIRRFERKLYQSLYSNN 465 >UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Psychromonas RepID=A1SZR5_PSYIN Length = 480 Score = 306 bits (785), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 170/452 (37%), Positives = 264/452 (58%), Gaps = 6/452 (1%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE-T 88 LP G L+ +V + + +++ + PAS QK++TA AA + LG +FR+ TTLE Sbjct: 29 LPKGTQLSYLVLDPANNQLLAESNAEILRTPASLQKLLTATAAKLYLGENFRYQTTLEGN 88 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 K +++N +GD+ RF DPTL R DI+ M+ + K GV QI G++LI+ + F+ + + Sbjct: 89 KSHIKNNHYQGDIRLRFVGDPTLSRADIKEMLTSFKALGVKQIRGDLLINAAHFSGYQWS 148 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 G WND+ C+++P A IV+RNC +L A + + SY PV + S V + Sbjct: 149 DGQAWNDLGVCYTSPSNAIIVNRNCVLGNLSVVSADAKKARLFIPSYEPVEISSNVDVVT 208 Query: 209 RGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 + Q+C L + NR+ L GC+ R+ P LAF+V D +YA I++ ELK GI Sbjct: 209 SAQRDEQFCALKMTRNSDNRYHLWGCMVPRNRPFGLAFSVNDPFAYASQIIESELKNVGI 268 Query: 269 TWSGTL-LRQTQV-NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 +G + + Q + + V+ QS L LL+IMLK SDN+IAD++F+ +G A F Sbjct: 269 KLTGKVKIEQIKTAKKVSQVLVKYQSPELGKLLEIMLKDSDNLIADSLFKTLGAAYFQQD 328 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 G + G+ A++ IL Q+ GVD+ N +ADGSGLSRHNL++ M VL+Y+ Q+D +LN Sbjct: 329 GNFLNGAKALKLIL-QENGVDLENAYLADGSGLSRHNLMSAKLFMTVLKYVYQNDAKLNL 387 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 + +AG DG+L Y G+ + G + AKTGS++GV NL G + TA G+R+ F ++ Sbjct: 388 LDSFSIAGVDGTLHYHKGVAGPLLKGNIVAKTGSMKGVANLLGIVKTARGERL-FALIIN 446 Query: 447 GYAVEPAD-QRNRRIPLVRFESRLYKDIYQNN 477 GY D + + P+V FE ++ I +++ Sbjct: 447 GYNWPETDLTKATKSPVVIFEHAFFETIIKSS 478 >UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibrionales RepID=B7VJI8_VIBSL Length = 477 Score = 297 bits (761), Expect = 5e-79, Method: Compositional matrix adjust. Identities = 155/452 (34%), Positives = 265/452 (58%), Gaps = 13/452 (2%) Query: 27 ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 + +LP G++ +L+++ + + ++ +S PAST K++TALAA ++LG +F +TT++ Sbjct: 27 LDKLPDGSSTSLILKSLSDDSSELNTNSDGFYPPASTLKLVTALAAKLELGDNFNYTTSI 86 Query: 87 ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 D+V F DPTL+R+ ++N++ KS I GN+ +D S F + Sbjct: 87 ARSNK--------DVVIAFSGDPTLQREHLKNLLDQYAKSQSKTIKGNLYLDNSAFTGYQ 138 Query: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206 +A GWPW+ + C+SAP +A +D NC S+Y+ K + + ++YP+ + + T Sbjct: 139 RAVGWPWDILGVCYSAPSSAMTLDSNCAQASIYT--KDNGTTRVYIPAHYPIDVTTTATT 196 Query: 207 LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 + R +A C+L+++ N + L+GCL +R +PLPL FA+Q Y ++ LK+ Sbjct: 197 VTRSGQKATQCDLELITTPDNTYKLSGCLVERKKPLPLKFAIQSPELYTVQVVTSILKEL 256 Query: 267 GITWSGTLLRQTQVNE-PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 I G ++ + T++AS S L +L+ IMLKKSDN+IAD + + +G + Sbjct: 257 RIEVKGNVVVGKKAKSGKSTLIASHSSEKLPELINIMLKKSDNLIADNLTKTLGATFYVQ 316 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 PG++ G++A++QIL +A +D+ + DGSGLSR+N + TM QVL+YI ++D +LN Sbjct: 317 PGSFNNGTEAIKQILLTKANIDLSQAQLVDGSGLSRNNRMTSQTMAQVLRYIWENDKQLN 376 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA-FVQY 444 I +P +G DG+L+YR + +A + G + AK+GSL G YN+AGF +G+ + FVQ+ Sbjct: 377 LIEAMPTSGTDGTLKYRQSMRKAPIQGNIIAKSGSLYGSYNMAGFGLDKAGKPNSLFVQF 436 Query: 445 LSGYAVE-PADQRNRRIPLVRFESRLYKDIYQ 475 + Y + P ++ P+ +FE Y D+ + Sbjct: 437 VRDYFPDTPDPEKPVEAPITQFERAFYTDVVE 468 >UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Vibrio fischeri RepID=B5FA68_VIBFM Length = 468 Score = 295 bits (754), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 159/483 (32%), Positives = 268/483 (55%), Gaps = 31/483 (6%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M F R+ + S I+FS A++ E ++ LP+G+ A+ V+ + ++ ++ P Sbjct: 1 MFFFRYSLIALSLISFS-SIADIKETLSSLPSGSRAAITVENLQSNKIEFQQKQDELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST K++TAL A + LG +F FTTTL D+V F DP+L R+ + + Sbjct: 60 ASTLKIVTALVARLALGTEFTFTTTLYKADK--------DVVLTFSGDPSLSRKQLSEL- 110 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 S + I G++ ID SIF +++A GWPW+ + C+SAP +A +D NC S+ + Sbjct: 111 --FNDSELKTIQGDLWIDGSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASITT 168 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F+ + + P++ S +++ R ++ +C+L++ N + L GCL +R++ Sbjct: 169 HEDGSTRVFVPI--HQPISFSSYAKSVSREEQKSTFCDLELTTQG-NHYELNGCLVKRNK 225 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT------VVASKQSAP 294 PLPL FAVQD + + L + I +G + + P T V+A S P Sbjct: 226 PLPLKFAVQDTRDFTKRTVSKILAEHNIKLNG----EIRFGAPKTELTNLNVLAKHNSKP 281 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L +LL MLKKSDN AD + +M+GH + PG++ G+ A++ IL +QA +D+ N ++ Sbjct: 282 LMELLDHMLKKSDNHYADNLTKMLGHLNYQQPGSFTNGTAAIKDILLKQADIDLSNAVLV 341 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLSR+N + M +LQ+I +++ EL I +LP +G DG+L+YR+ + + + G + Sbjct: 342 DGSGLSRNNRMTANQMKSILQFIHKYNKELGLIELLPTSGIDGTLKYRSSMRKEPIKGSM 401 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR----FESRLY 470 +K+GSL G YN+AGF+ + + FVQ+++ Y P + +P+ R FE Y Sbjct: 402 KSKSGSLFGSYNMAGFVGLENKEPQLFVQFVADY--HPVAAKEGAVPVERPIDTFEKSFY 459 Query: 471 KDI 473 +++ Sbjct: 460 QEL 462 >UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Aeromonas RepID=A4SLJ6_AERS4 Length = 481 Score = 290 bits (742), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 176/465 (37%), Positives = 260/465 (55%), Gaps = 26/465 (5%) Query: 5 RFIIGLTSCIAFS------VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMA 58 R +IG C FS VQAA + P G A++VQ G A ++ M Sbjct: 3 RLLIGF--CALFSTLVPTLVQAATLTP-----PKGGQYAIIVQGNGGIEFA--RNADDMI 53 Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG-VLKGDLVARFGADPTLKRQDIR 117 PAST KV+TALAA ++LG DFRF T ++ + + G + GD+ F DPTL R D Sbjct: 54 APASTMKVLTALAARLELGADFRFATDIQAQPGAKQGDAINGDIWINFVGDPTLSRMD-- 111 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++A K+ GVN+I GNV ++T + +++ GW W D T CF+AP ++ I+D+NC + Sbjct: 112 -LLALFKQLGVNRIKGNVYVNTGAYNGYERGNGWSWGDQTLCFAAPVSSVIIDKNCAYAT 170 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFS-QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + +A + G A VA+ P+ + + +V + G Q+C L+V N + L GC+ Sbjct: 171 I-TATQIGRPATGNVATGVPIGIGTDRVDVMSYGDMARQFCALEVDMAKGNFYELKGCIT 229 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT--VVASKQSAP 294 EP L FA+ D ++ ++ + +AGI G L Q PG+ + + S Sbjct: 230 PNKEPQGLRFAIHDVEAWGWDNIRWAMDRAGIAHEGLL--QVTHKAPGSAETLGTHYSVS 287 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L +L MLKKSDN+ ADT + +G +N PG++R+G+ AVR IL +Q G+D+GN +A Sbjct: 288 LPIMLSKMLKKSDNLYADTFLKTVGRHYYNKPGSYRSGTMAVRAILTKQ-GIDLGNATLA 346 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLS HNLI+ M+ VL +I ++D EL I +LP + DG+L +R + + +V Sbjct: 347 DGSGLSAHNLISARQMLSVLNFIQKNDAELGLIKLLPSSQVDGTLAWRRSVTAPMMKNRV 406 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 AKTG++ G NLAGFI T GQR AFV + G + +PA R Sbjct: 407 HAKTGTITGTSNLAGFIDTVGGQRKAFVMFQRGLSQDPATHERYR 451 >UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6END1_ALISL Length = 469 Score = 288 bits (737), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 166/478 (34%), Positives = 260/478 (54%), Gaps = 20/478 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M SR I S +FS A++ I LP+G+ A++V+ + + ++ P Sbjct: 1 MPLSRLFILSLSLYSFST-FASIPSSIQLLPSGSRAAIVVESLHDQSIEFQQKENELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTL-ETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 AST KV TALA+ + LG +F+F TTL +TK N + F DP+L R+ N+ Sbjct: 60 ASTLKVATALASRLALGKNFQFKTTLHKTKHN--------SVQLTFSGDPSLTRE---NL 108 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + K SG+ I G++ +D SIF +++A GWPW+ + C+SAP +A +D NC S+ Sbjct: 109 SSLFKNSGLKNIKGDLWVDDSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASIS 168 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + F+ + + P++ + RT+ + +C+L++ N + L+GCL RS Sbjct: 169 TNENGTTRVFVPI--HQPISFTTAARTVSAKEKKNSFCDLELTTQG-NNYHLSGCLVARS 225 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL--RQTQVNEPGTVVASKQSAPLHD 297 +PLPL FAVQ+ + L L + I SG ++ T + ++AS QS PL Sbjct: 226 KPLPLKFAVQNTTEFTEQTLLRILNEQNINLSGKIIFGNSTGKIQKTVLLASHQSEPLMV 285 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 LL MLKKSDN AD + + +GH + PG++ G+ AV+ IL +QA VD+ N +I DGS Sbjct: 286 LLNHMLKKSDNHYADNLVKTLGHYHYQQPGSFSNGTAAVKDILLKQANVDLTNAVIVDGS 345 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR+N + M +LQ++ ++D EL I++LP +G DG+L YR + + + G + +K Sbjct: 346 GLSRNNRMTANQMKSLLQFVYRYDKELGLIALLPTSGIDGTLIYRNSMRKEPIKGSIKSK 405 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 +GSL G YN+AGF+ FVQ+++ Y P +P+ R K YQ Sbjct: 406 SGSLFGSYNMAGFVGLEGNNPQLFVQFVADY--HPIAAEEGVLPVERPIDSFEKAFYQ 461 >UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Shewanella RepID=B0TT55_SHEHH Length = 476 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 170/475 (35%), Positives = 264/475 (55%), Gaps = 29/475 (6%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVG------ASAPAID 51 RF+ T C+ + +A D+Y+ + P + A++V + S+PA Sbjct: 2 LKRFVAATTLCLIAT--SAVADDYLANMVKAIEPKTSQTAIVVSPLNLNDEGHVSSPAYR 59 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 +Q++ +PAST K++TA+AA LG DFRF T +++ ++N ++GDL RF DPTL Sbjct: 60 KDAQRLFVPASTMKLLTAVAATTALGKDFRFKTQIDSFVGIKNRRIEGDLFIRFDGDPTL 119 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD--KAPGWPWNDMTQCFSAPPAAAIV 169 +D+R + LKK G++ IDGN+ + I + +APGW W+D+ C++AP + IV Sbjct: 120 TGRDLRQLFKQLKKHGLDHIDGNLYL---IGDQQETLQAPGWVWDDLGICYAAPVSRYIV 176 Query: 170 DRNCFSVSLYS--APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 ++NC L A G + F + + PV++ S G + +CEL + N Sbjct: 177 NQNCVKAKLSPTLADNQGKLTF---SQFEPVSIASTAVFDKVG--DTPFCELSLQRQANN 231 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 F L+GC + +PL LA A+ D A YA + + L GI G +L ++ ++ Sbjct: 232 EFILSGCHAGQ-KPLNLAIAISDPALYAQKTVANTLTSIGINIKGDVLLTSKRPANTILL 290 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A QS PL +L IML KSDN+IAD++ + +G + VPGT+ GS A++QIL +Q GVD Sbjct: 291 AEHQSKPLSELTDIMLLKSDNLIADSLLKRLGQYIYGVPGTFINGSAAMKQILTEQ-GVD 349 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 + + I DGSGLSR+NL++ ++QVL + Q + I LP+AG G+L+YR G Sbjct: 350 LSSANIVDGSGLSRYNLLSADQLIQVLLLLKQKEQLNFLIDQLPIAGKSGTLKYRNGYTA 409 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 + + G V AKTGS+ GV NLAGFI AFV +G++ P+ +++ P Sbjct: 410 SPLKGSVLAKTGSMMGVTNLAGFIKKDGQLSQAFVILENGHS--PSVKKSELAPF 462 >UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Shewanella RepID=A3QED0_SHELP Length = 543 Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 155/426 (36%), Positives = 243/426 (57%), Gaps = 8/426 (1%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P + L++ Q + + +++ + LPASTQK++TA+AA+ LG +F F T TKG Sbjct: 84 PPHSQLSIFAQDLSNNEILYQHNADTLVLPASTQKLLTAVAAMRVLGEEFSFATQFSTKG 143 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + +GVL GDL F DPTL D+R M+ +LK +G++ + GN+L+ +APG Sbjct: 144 RLSHGVLTGDLYLSFSGDPTLTTDDLRAMLKSLKDAGIHTVKGNLLL-VGQAKEQTRAPG 202 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF-IRVASYYPVTMFSQVRTLPR 209 W W+D+ C++AP ++ IV++NC L PK A + Y P+ + S + Sbjct: 203 WVWDDLGICYAAPVSSFIVNQNCVKGQL--KPKLASSASQLNFPRYLPIKV-STTAVFDK 259 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 E +CEL++ N + ++GC P +PL LA AV D A YA +L LK A I Sbjct: 260 TQQEP-FCELNLARLPDNHYHISGCYPG-DKPLNLAIAVDDPALYAKEMLTRMLKSAHIK 317 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 SG + + + + +S L LL+ ML SDN+IAD++F+ +G + V + Sbjct: 318 MSGQVAIAHRTPIGLKPLVTHKSEGLEALLRTMLLDSDNLIADSLFKAVGAHYYKVAENF 377 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 AG+ AV+ IL + G+D+ ++ I DGSGLSR+NLI+ + +VL +A+ + I + Sbjct: 378 HAGARAVKAIL-EADGIDLSHSQIIDGSGLSRYNLISARQLAEVLGLMAKDEKLRPLIEL 436 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 LP+AG G+L Y+ G HQA + KVSAKTGS+QGV NLAG+++ + ++ FV +G + Sbjct: 437 LPVAGVSGTLNYKRGFHQAPLMNKVSAKTGSMQGVDNLAGYLSLDASHQILFVVMENGQS 496 Query: 450 VEPADQ 455 + Q Sbjct: 497 QKSKKQ 502 >UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Shewanella RepID=A0KWP7_SHESA Length = 513 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 154/428 (35%), Positives = 241/428 (56%), Gaps = 8/428 (1%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P + +AL+ + + + + + +PASTQKV+TA+ AL LGPDFR+ T L + Sbjct: 57 PRHSQVALLARDLSTNTLLYSQQADTLFIPASTQKVLTAVTALATLGPDFRYVTELWSDA 116 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + G + G + RF DPTL + D++ + A L+K G+ I+G++ + +APG Sbjct: 117 PIRQGHIAGSVYLRFSGDPTLTQDDLKALFAHLQKQGITSIEGHLYL-IGDKQEQLQAPG 175 Query: 151 WPWNDMTQCFSAPPAAAIVDRNC-FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 W W+D+ CF+AP ++ I+++NC + S+ K +R AS + V + S P+ Sbjct: 176 WVWDDLGICFAAPVSSYIINQNCVYGQFAPSSAKHASEVKLR-ASSFGVKVSSDAIFSPK 234 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 + +C+LD+V N++ L GC P +E +PLA A+ D +A L LK ++ Sbjct: 235 AGHD--FCQLDLVRLGQNQYHLRGCYPG-NEAIPLAIAISDPEKFAMDTLTATLK-GEMS 290 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 SG + + ++AS SAPL +LLK ML KSDN+IAD++F+ +G + + G++ Sbjct: 291 LSGKVKIGNAIPSKAKLIASHSSAPLPELLKTMLLKSDNLIADSLFKRVGQSYYKAQGSF 350 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G+ A+R IL + G+D+ N I DGSGLSR+NL++ + VL I Q + I Sbjct: 351 THGAAAMRHIL-TELGIDLTNANIVDGSGLSRYNLLSAKQLADVLALIYQDARFHSLIDS 409 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 LP AG G+LQYR G + + +V AKTGS+QGV NLAGF+ A + + FV +G + Sbjct: 410 LPEAGVSGTLQYRLGYTKPPLKHRVFAKTGSMQGVANLAGFMRLAQQRDILFVVLENGIS 469 Query: 450 VEPADQRN 457 E QR Sbjct: 470 PETKKQRK 477 >UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CP00_SHEPW Length = 463 Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 161/449 (35%), Positives = 241/449 (53%), Gaps = 11/449 (2%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R I+ + FS A D + LP + L + ++ +D +S +M +PAST Sbjct: 4 RKILASAILLTFSSNVAANDIKLI-LPDTSALTAIKYSNHQNSTKLDQNSDKMFIPASTM 62 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA+AA LG F++ T + K +ENG + GD+ F DPTL DI ++ A L+ Sbjct: 63 KLLTAIAATASLGDQFKYQTKVLAKTPIENGKIDGDVYILFSGDPTLTSLDIESLFAQLQ 122 Query: 125 KSGVNQIDGNV-LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 + G+ I GN+ L+ H APG W+D+ C+SAP ++ I++ NCF P+ Sbjct: 123 QQGLALITGNIYLVGEEYELQH--APGRVWDDLGICYSAPVSSFIINENCFKAEF--VPR 178 Query: 184 PGDMA-FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 D A +++ PV++ S R + S + C+L + + N F L GC P S+PL Sbjct: 179 LADDAGEVKIVGSEPVSIES--RAVFDKSLQQPICDLTLARLENNHFRLDGCYPG-SKPL 235 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 L A+ D A +A L +K I G +L +Q VA QS PL DL+ M Sbjct: 236 KLNIAITDPARFAKDKLTQIVKNTKIVLRGQVLIASQFPAYSLSVAEHQSEPLTDLIATM 295 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 L KSDN+IAD++ + +G + PGT+ +GS A++ IL QQ G+D+ N I DGSGLSR+ Sbjct: 296 LLKSDNLIADSLLKRLGQQVYGAPGTFASGSAAMKLILTQQ-GIDLSNAHIVDGSGLSRY 354 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 NL++ + + L + + N I+ LP+AG G+L+YR G + GKV AKTGS+ Sbjct: 355 NLLSANQIAEGLALVRDNPAYTNIINSLPVAGESGTLKYRKGYANVSLKGKVLAKTGSML 414 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVE 451 GV N+AGFI FV +G + E Sbjct: 415 GVSNMAGFIKNGDKITATFVVLQNGVSPE 443 >UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q082P9_SHEFN Length = 554 Score = 240 bits (613), Expect = 8e-62, Method: Compositional matrix adjust. Identities = 153/466 (32%), Positives = 244/466 (52%), Gaps = 39/466 (8%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET-- 88 PA + L + V + +Y++Q + PAS QK++TALAA QLG DF + T L T Sbjct: 81 PAHSQLGITVWDMTTQKTVFEYNNQSLMQPASVQKLLTALAATKQLGKDFIYQTRLTTLA 140 Query: 89 -----KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 K +ENG+ GD+ F DPTLK QD+R ++A+L + G+ ++ GN+++ TS Sbjct: 141 QQPLDKSLIENGIYSGDIYIEFSGDPTLKYQDLRQLLASLSQLGITELTGNIVL-TSEQD 199 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA------------PKP----GDM 187 S +APGW W+D+ C++AP + I+D+NC L + +P D Sbjct: 200 SQLQAPGWVWDDLGICYAAPISPFIIDKNCVYGRLATTGYNKVANITMMGNRPIEISNDA 259 Query: 188 AFI-----RVASYYPVTMFSQVRTLPRGSAEA-QYCELDVVPGDLNRFTLTGCLPQRSEP 241 F+ R + V + LP E+ C+L + D NR+ L+GC ++ Sbjct: 260 YFVTPIVNRPVAKPAVQTLTDAVVLPAYLTESVPQCQLTLSRFDNNRYHLSGC-HVGAKS 318 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITW-----SGTLLRQTQVNEPGTVVASKQSAPLH 296 LPLA A+ + YA I+ +L GI + + + Q V+AS QSA L Sbjct: 319 LPLAIAITEPQLYAQQIVAKQLASLGIVHQLPITASIMNTEAQFMAQRQVIASHQSAALP 378 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 LL+ ML KSDN+IAD++ + +G + P + A++ IL G+D+ N IADG Sbjct: 379 QLLETMLLKSDNLIADSLLKKLGEVYYQAPSDFARSGQALKTILYS-IGIDLSNANIADG 437 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR+NL+ P ++ VL + Q + +LP +G G+L+Y+ +++ + V A Sbjct: 438 SGLSRYNLLTPEHVLSVLTTLYQQPEYRFLLELLPQSGVSGTLRYKRYFNKSPLKNHVFA 497 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 KTGS+ G+ NLAG + ++G FV + +G + P ++ ++ P Sbjct: 498 KTGSMLGIANLAGRVNVSNGHDYLFVLFENG--LSPQIKKQQKAPF 541 >UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Coxiella burnetii RepID=A9NBH1_COXBR Length = 477 Score = 232 bits (592), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 141/433 (32%), Positives = 233/433 (53%), Gaps = 11/433 (2%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 N++ + + + ANL +V V SQ + PASTQK+ TA+AAL LG D++ Sbjct: 29 NINTILRSIKSKANLGFIVSDVKTGRVIFSERSQFLFSPASTQKLFTAVAALYYLGSDYQ 88 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 FTT L T G ++ L+G+L +F DP L +D+ ++ LK+ G+++I G+V ID + Sbjct: 89 FTTALLTNGAIKGQTLQGNLTLKFSGDPELTTEDLNRLIEKLKELGIHRISGHVYIDNTA 148 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 + PGW +D++ ++AP +A I++RN F + + A K + V F Sbjct: 149 YNDVPYPPGWMLDDLSYGYAAPVSAIIINRNKFLLHILPAKKGNAQPTLSPILPAGVAHF 208 Query: 202 S-QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 S +VRT + + + C L V + N + L GC+ + A+++ YA +LK Sbjct: 209 SNRVRT---TAHQIKQCPLTVYSDNRNNYQLAGCINRAWGQQRRTLAIRNPVIYANVLLK 265 Query: 261 DELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 L I + G LL + N+ V+A +S PL +LK MLK SDN+ D++ + +G Sbjct: 266 QALADNVIQYQGPILLAGSSAND--VVLAEHKSPPLRHMLKEMLKNSDNLTTDSLLKKMG 323 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + PGTW+ G A+++IL + G+D N +I DG+GLSR+NL++P M ++L++ Sbjct: 324 ERFYKKPGTWQNGLHALKKIL-EPTGIDFKNNLINDGAGLSRYNLVSPDQMAKLLRFAYN 382 Query: 380 HDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + + LP+ G DG+L R + +V AKTGS+ GV LAG++ T + Sbjct: 383 QKTIRDPLLKALPIGGKDGTLAGR--MRSIANSERVHAKTGSMAGVSALAGYLRTRQNKV 440 Query: 439 MAFVQYLSGYAVE 451 ++F ++G+ E Sbjct: 441 LSFAIMINGFVGE 453 >UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rickettsiella grylli RepID=A8PP32_9COXI Length = 497 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 141/427 (33%), Positives = 236/427 (55%), Gaps = 18/427 (4%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 N+++ ++ G N + +Q + Y++ + +PAST K+ T +AAL LGP F+ Sbjct: 49 NINQILSHF-KGFNTGISIQSLSTGKIIYQYNANRRFIPASTLKLFTGIAALEYLGPHFQ 107 Query: 82 FTTTLETKGN--VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 F T T V +G L G+L +F DP L D+++M+ TL + +N++ GN++ID Sbjct: 108 FKTRFLTNSGSIVRHGTLMGNLYIKFSGDPYLTLNDLKDMLETLNEQHINKVQGNIIIDD 167 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 ++ PG +D C++AP A I++RNCF++S+ + + + + Sbjct: 168 TVIDRSTWPPGRVIDDRIFCYAAPVTATIINRNCFNLSIKPTQNLLHPTVTKSSRHLGIV 227 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDL--NRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 + +Q T + +A+Y LD+ P + N +TLTG L ++ PL A A+Q+ Sbjct: 228 IDNQAVT--KRLKQARY-SLDLKPNAVSKNHYTLTGYLSRKMGPLSFAVALQNPNLATYD 284 Query: 258 ILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP-LHDLLKIMLKKSDNMIADTVFR 316 I+ LK+ I +S + +T P ++ S+P L L+K MLKKSDN+IAD++ + Sbjct: 285 IVAGLLKKYSIRYSSLIFGKT---PPFAKTLAENSSPELAFLIKNMLKKSDNLIADSLLK 341 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ- 375 +G F+V G+W++G +AV+ IL + ++ ++ DGSGLSR N I P +++L Sbjct: 342 KLGEKYFSVQGSWKSGRNAVQAILANKTNINFKQLVMVDGSGLSRANSITPNAFVKLLNF 401 Query: 376 -YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 Y D++L F LP +G DG+L++R G GK+ AKTGS+ G+ +LAG+I TA Sbjct: 402 AYTQLPDSDL-FFESLPRSGIDGTLKHRLG---GASLGKIHAKTGSMHGISSLAGYIQTA 457 Query: 435 SGQRMAF 441 + +AF Sbjct: 458 NHHILAF 464 >UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6E3_SHEAM Length = 554 Score = 218 bits (555), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 159/453 (35%), Positives = 237/453 (52%), Gaps = 16/453 (3%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 Y+ P N+A++ + I +S++ LPAS QK++ ALAA LGPDFRF T Sbjct: 109 YLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLPASVQKLLLALAAQHTLGPDFRFHTQ 168 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 L +G + VL+ L F DP L ++ ++ +LK+ GV I+ L+ S Sbjct: 169 LFVQG-FKPPVLE-RLYIGFSGDPLLTSAELSALLGSLKQQGVRTINQVYLV--SAVDKS 224 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 DKAPGW W+D+ C+++P A +D+NC SL K GD ++R+A +++ +Q+ Sbjct: 225 DKAPGWVWDDLGVCYASPVAEFSLDKNCVKASLRPTEK-GDGTYVRLAKDAAISIENQLN 283 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 P S + L VV NR+ L GC + + LPL+ AV D ++ + LK Sbjct: 284 YRPGASFKECSPHLSVV--GPNRYLLHGCYSGK-QALPLSIAVTDTDAWLQEKVAGLLKA 340 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 AG S T R + ++A QSA + LL MLK+SDN+IAD + + +G + Sbjct: 341 AGFN-SHTPKRLHTLPANAHLIADHQSATMDSLLSEMLKESDNLIADALLKQLGKRKGQD 399 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 + GS + L GVD+ + + DGSGLSR+NL+ +MQ L I + + Sbjct: 400 ESDFYQGSKEMAANL-TLLGVDLSSANLVDGSGLSRYNLLNARQLMQTLLLIHHTEAYAS 458 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQY 444 LP++G DG+L Y+ G + + +V AKTGS+QGV NLAGF+ SG R AFV Sbjct: 459 LKDGLPVSGKDGTLLYKRGFNSLPLKDRVQAKTGSMQGVSNLAGFLR--SGDREYAFVVL 516 Query: 445 LSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 +G VEP Q +R P F + L K + Q+ Sbjct: 517 ENGL-VEPESQNGKRKP--GFAATLLKALLQHE 546 >UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Sulfurihydrogenibium RepID=B2V8H3_SULSY Length = 475 Score = 213 bits (543), Expect = 9e-54, Method: Compositional matrix adjust. Identities = 133/409 (32%), Positives = 217/409 (53%), Gaps = 16/409 (3%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A + + ++ + Y+ + +PAS QK+IT ++A+ L PDF++ TTL T GNV+ Sbjct: 39 AKVGIFIKSLSEDDFTYMYNYRNPFIPASNQKLITTISAIANLSPDFKYRTTLATNGNVK 98 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 NG L G+L G DP+L QD+ NMV LK+ G+N+++GN++ D S F+ GWP Sbjct: 99 NGTLYGNLYLIGGGDPSLTVQDLENMVKKLKEYGINRVEGNLIGDNSYFSEEGTGQGWPE 158 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 +D+ CF+A + V+ NC +S+ K G + S P+ + Q+ S + Sbjct: 159 DDLNYCFTARFSGLSVNENCLRISV--NIKNGKV----YVSMNPLNNYYQIVNNIEFSKK 212 Query: 214 AQYCELDVVPGDLNRFTLTGCL-PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 A L V + NR L G + +RS L + V + + ++L L + GI SG Sbjct: 213 AGNVILRV---EGNRLILEGKVSSKRSLNLEFSIPVNHPSIFTLSVLSKILDENGIKVSG 269 Query: 273 TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAG 332 + + V+ QS PL +L+K K S+N A+ +FR IG + V T+ A Sbjct: 270 KMYLGKAASYKYFVI--HQSKPLRELIKKANKDSNNFYAEQIFRTIGKEVYGVGSTY-AS 326 Query: 333 SDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL 392 + A+ LR+ V N I DGSGLS++N P +++VL YI + +F L + Sbjct: 327 ARAIIDTLRKMH-VATENIRIYDGSGLSKYNYTTPEALVKVLDYIYKTPYFYDFFESLAI 385 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 +G DG+L++R L+ + G++ AKTG ++ V NL+G++ ++G+ F Sbjct: 386 SGVDGTLKHR--LNDQSLKGRIIAKTGYIKKVKNLSGYVKASNGEVFVF 432 >UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=2 Tax=Legionella RepID=C6N6B5_9GAMM Length = 611 Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 133/435 (30%), Positives = 235/435 (54%), Gaps = 15/435 (3%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 SVQ VD+ I ++ NL ++V + + ++Q++ +PAS K+ + AAL+ L Sbjct: 36 SVQG-EVDKLIQRVNPQVNLGMVVVDLNSGETLYRRNAQKLFIPASNMKLFSEAAALMVL 94 Query: 77 GPDFRFTTTLE-TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 GPD+ F L + G V+ GVL+G++ + DP+ R+D++ ++++LK +N I GNV Sbjct: 95 GPDYHFKNQLSLSSGKVQQGVLQGNVYVQLSGDPSFSREDLKKLLSSLKDWNINTIQGNV 154 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS- 194 ID+S+ PGW +D++ + AP A +VD N +V++ GD+A + V Sbjct: 155 YIDSSLAQVDAYPPGWLTSDLSYSYGAPTAPVMVDANRLTVTVNPGAHTGDLAVVEVDDG 214 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 +++ +QV T A A+ C + N T GC+ + A+++ +Y Sbjct: 215 GGAISINNQVTT----KASAKGCGVGFSLDKDNHLTARGCVGVDQWAVQQRMAIKNPLAY 270 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTV-VASKQSAPLHDLLKIMLKKSDNMIADT 313 A ++K+ L A I +G + Q G++ +A++ S L +L+ LK SDN+ AD+ Sbjct: 271 AQGMIKNNLASANIQLNGEV--QLGTAPAGSILIATQYSKALSELMADTLKPSDNLYADS 328 Query: 314 VFRMIGHARFN-VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 ++ + A+ N P W+ ++ L+ Q G+D N + DGSGLSR++L+ P + Sbjct: 329 LY-LHAAAKLNGSPVNWKGAEPLIKNFLQAQTGIDFKNAVFTDGSGLSRYSLVTPEQTIS 387 Query: 373 VLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 +L ++ Q +IS LP++G DG+LQ R G V AKTG++ G+ +L+G++ Sbjct: 388 LLTFLHQRFPLSYEYISALPVSGRDGTLQKR--FRVPTQQGFVRAKTGTMTGINSLSGYL 445 Query: 432 TTASGQRMAFVQYLS 446 T++G +AF Y++ Sbjct: 446 YTSNGHTLAFAMYIN 460 >UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=6 Tax=cellular organisms RepID=A5IAY8_LEGPC Length = 597 Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 132/438 (30%), Positives = 234/438 (53%), Gaps = 18/438 (4%) Query: 23 VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRF 82 VD+ I +L NL ++V + + ++ ++ +PAS K+ + AAL+ LGPD++F Sbjct: 27 VDKLINRLNPHVNLGIVVTDLTSGETLYKRNANRLYIPASNMKLFSEAAALMALGPDYQF 86 Query: 83 TTTLETKGN-VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 L T N ++ GVL G+L DP+ R+D++ ++++LK + I GNV+ID+S+ Sbjct: 87 KNQLSTSANQLQQGVLHGNLYLHLSGDPSFSREDLKTLLSSLKDWNITTIQGNVIIDSSL 146 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS-YYPVTM 200 + PGW +D++ + AP A +VD N ++++ K G A + V + + Sbjct: 147 MSIPAYPPGWLTSDLSYSYGAPIAPLMVDSNRLTITVNPGAKAGAPAIVEVDDGGGTINL 206 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 +Q T A + C + N T+ GC+ + A+++ YA ++ Sbjct: 207 NNQATT----KASEKGCGVGFYLDPENNLTVRGCVGLGQWAVQQRIAIKNPFVYAQGMIV 262 Query: 261 DELKQAGITWSGTLLRQTQVNEPGT-VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 EL ++ I +G +L GT ++A++ S P+ L+ LK SDN+ AD+++ Sbjct: 263 SELAKSNIKLNGQVLLGRA--PAGTLLIATRYSKPISQLMADTLKPSDNLYADSLYL--- 317 Query: 320 HARFNVPGT---WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 HA + G+ W+ ++ L+QQ G+D+ ++ DGSGLSR+NL+ PA M +L++ Sbjct: 318 HAAAKIKGSPVDWKQAQPVIKNFLQQQTGIDLKDSNFTDGSGLSRYNLVTPAQTMALLKF 377 Query: 377 IAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 + Q +I+ LP++G DG+LQ R G V AKTG++ G+ +L+G++ TA+ Sbjct: 378 LYQRFPLSYEYIAALPISGRDGTLQKR--FKTPNQQGFVRAKTGTMTGMNSLSGYLYTAN 435 Query: 436 GQRMAFVQYLSGYAVEPA 453 G +AF Y++ +PA Sbjct: 436 GHTLAFAMYINRLPGKPA 453 >UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Marinomonas sp. MED121 RepID=A3YAM6_9GAMM Length = 496 Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 146/448 (32%), Positives = 230/448 (51%), Gaps = 39/448 (8%) Query: 51 DYHSQQ---MALPASTQKVITALAALIQLGPDFRFTTTLE-TKGNVENGVLKGDLVARFG 106 D+HSQ +A PAS K+ TA A LG ++RF T L + ++ G L G L Sbjct: 48 DWHSQNTQYLANPASLMKIFTATLATETLGKNYRFKTELAYDETSLNQGRLTGPLTLTLT 107 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP+ ++D+ ++ TL K+GV ++D V ID S + H + G WND CF+AP +A Sbjct: 108 GDPSFTQKDLHTLLMTLAKAGVKKLD-KVEIDASRYQGHAWSLGQVWNDHGICFAAPTSA 166 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 A+++RNC +L A KPG +A P+T+ +QV T+ A+ L V+ Sbjct: 167 AMINRNCVFGNL-KATKPGQVAHFYQTPNSPLTVENQVVTIEANKAKGCQVLLKVLGA-- 223 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV 286 N + LTGC+ ++ + LPL F+ + ++ I EL G G+ + + +++ + Sbjct: 224 NHYRLTGCIDEKRKTLPLGFSANEANTFFAHIFMQELILLGF---GSEIEISFIDQAPSW 280 Query: 287 VA---------SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH----------ARFNVPG 327 +A S SAPL L+ MLK+SDN++AD +F+ GH A F Sbjct: 281 LAKTDKSVKRISHHSAPLTKLVARMLKRSDNLVADALFKASGHQYFLSENAGAASFETLD 340 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 ++ GS A+ +L + +D ++ DGSGLSR NL+ ++ QVL+ H + + Sbjct: 341 AYQKGSLALMSLLDKNQ-IDSQGLVVRDGSGLSRENLLYATSLYQVLELWLSHPKFVWLV 399 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR------MAF 441 LP+A G+L+ R L + G+V AK+GS+QGV NLAGF+ A + F Sbjct: 400 EALPIAAQSGTLKNRESLKHDMLKGRVLAKSGSMQGVVNLAGFVQVADENKGLKLRPFVF 459 Query: 442 V--QYLSGYAVEPADQRNRRIPLVRFES 467 + Q+ AV+PA + L +FE+ Sbjct: 460 MVNQFSKSKAVKPAKFSVEELSLFKFEA 487 >UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NB4_SHEDO Length = 560 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 137/443 (30%), Positives = 224/443 (50%), Gaps = 42/443 (9%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 + ++Q++ PAS K+ TA+ A+ +LG D+R+ + + KG + N L+GD+ DP Sbjct: 106 ELNTQKLMQPASVMKLFTAVTAIAELGHDYRYRSQVFIKGPIINKALEGDVWINLSGDPK 165 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 L QD+ ++A K +G+ +I+G V + T+ +APGW W+D+ C++AP + I+D Sbjct: 166 LTTQDLSRLIAQFKYAGIEKINGQVQLLTTA-NEQVRAPGWVWDDLGICYAAPVSRLILD 224 Query: 171 RNCFSVSLYSAPK--PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ--YCELDVVPGDL 226 NC L + G+ + +++ P+ +F+Q R +P S + C+L + D Sbjct: 225 GNCILAKLIPSQNGIKGETR-LSISTSSPIKVFNQARFIPTSSNKQSRDLCQLSLARFDN 283 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT-------- 278 N++ L+GC P + LA AV D Y A L+ KQ I + T Sbjct: 284 NQYKLSGCYPSDG-GINLAIAVNDVEPYMLAKLEALFKQHQIVLKHAINLLTDDDSALSA 342 Query: 279 QVNEPGT---------------VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 Q NE + ++AS S L +L MLK S+N+IAD VF+ IG + + Sbjct: 343 QFNEASSSKDEPSLVSDDEELRLIASHSSESLMAMLDTMLKDSNNLIADRVFKTIGRSFY 402 Query: 324 -----NVPGTWRAGSDAVRQILR-QQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 V + S A Q+ R + G+ + + + DGSGLSR+N I+ A +M +++ I Sbjct: 403 QTTHPQVSDNFTHASKA--QLARLNEMGIKLDSANLVDGSGLSRYNAISAAQLMSLIKLI 460 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + + S LP AG G+L Y+ G Q + KV AKTG++ GV N AG + T+ G Sbjct: 461 YSDERFTSLDSALPEAGVSGTLAYKRGF-QTKLRAKVKAKTGTMLGVANFAGRMQTSQGD 519 Query: 438 RMAFVQYLSGYAVEPADQRNRRI 460 + FV +G + P Q ++ Sbjct: 520 -LYFVILENG--INPHQQAQHQV 539 >UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE58_BREBN Length = 964 Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 118/414 (28%), Positives = 219/414 (52%), Gaps = 10/414 (2%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG-VLKGDLVARFGADPT 110 +++++ +PAS K+ T +A + +LGPD+++ T + G V NG +L+GDL+ + DP+ Sbjct: 78 HNAERNFVPASNMKLFTTIAGMDKLGPDYQWKTEVFVSGKVNNGGILQGDLILKGYGDPS 137 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 LK +D++ M +K G+ +I+GN+L+D S F W W+D +SA + V+ Sbjct: 138 LKPEDLQQMAKAIKDLGIKRINGNLLLDDSYFDETRLGTSWMWDDEPYGYSAQISGLAVN 197 Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 +N +++ D V + P T + V + +A + L P + Sbjct: 198 KNVTTLTATPGKTVNDAP---VLTMNPATTYITVTNQLKTTAGKESNVLVERPRGKSEII 254 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 ++G + ++ P ++D A Y G + KD+L++ GI + V + G + + Sbjct: 255 VSGTIGVQAAPYDEDVTMEDPAFYVGDLWKDQLQKQGIALHPKAEVKKTVLQSGVPLYTH 314 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 S PL ++ + K+SDN A+ + + +G + G++ AGS+AV +++ +AG++ G Sbjct: 315 LSKPLGEITVELNKESDNFYAEMLVKTLGVTQKG-EGSFEAGSEAVADVMK-RAGIESGF 372 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 + DGSGLSR N I P M++ L ++ + + LP+AG DG+L+ R + Sbjct: 373 RQV-DGSGLSRFNWITPEQMIEALIFLQEQEYRTELEKSLPIAGVDGTLKNR--MKGTSA 429 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG-YAVEPADQRNRRIPLV 463 + + AKTGSL GV ++G++T +G ++AF ++G Y + A + RI ++ Sbjct: 430 EKNLVAKTGSLSGVNTMSGYVTAKNGHKLAFSILINGIYKSKYARELQDRIGIL 483 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 123/440 (27%), Positives = 215/440 (48%), Gaps = 40/440 (9%) Query: 32 AGANLALMVQKVGASAPAIDYH--SQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 AG ++++ + + + Y + + PAS K++T AL QLG D+ F T E Sbjct: 520 AGVTAGILIKSLDTTGDPVLYERDADTLLTPASNLKLLTTATALNQLGSDYVFKT--EVF 577 Query: 90 GN---VENGVLKGDLVARFGADPTLKRQD---------IRNMVATLKKSGVNQIDGNVLI 137 G+ +G+ +G+L + DPTL ++ I + LK+ G+ +I+GN+++ Sbjct: 578 GDAPITSSGIQQGNLYVKGYGDPTLHTENALQVQEGVSIEKIAGWLKQQGITRINGNLVM 637 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY---SAPKPGDMAFIRVAS 194 D S F GW W+D + ++ A ++R + A KP D+ + + Sbjct: 638 DDSYFDQQRLGLGWAWDDESYYYNPTIGALALNRGTVMIEFKPANDAGKPVDINVLPKTA 697 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 Y V + ++ +T+ +G D N L G LP E V++ A Y Sbjct: 698 Y--VQVINEAKTVQKGEENTFAILRDR---GTNTIRLLGNLPLDHEGDYERVPVEEPAKY 752 Query: 255 AGAILKDELKQAGITW---SGTLLRQTQVNEPGTVVASK-QSAPLHDLLKIMLKKSDNMI 310 G +LK+ L+Q GI + S L++Q P V ++ +S PL D+++ + K+SDN Sbjct: 753 VGTVLKETLQQQGIAFAPKSEVLIQQV---PPAAVKWTQFESLPLKDIVQYLNKRSDNYY 809 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI--IADGSGLSRHNLIAPA 368 A+ + + +G A+ G+ +G++ V++ + GNT + DGSGL+R+NLI+ Sbjct: 810 AEMLLKTLGAAKKG-KGSAASGAEVVQEAVASLG----GNTTFDMMDGSGLTRYNLISAR 864 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 + VL+ + + + LP+AG DG+L+ R L + AKTGS+ GV L+ Sbjct: 865 QIASVLEGMTKESTFAAYDESLPIAGIDGTLKNR--LKDTPAANNLHAKTGSMTGVNTLS 922 Query: 429 GFITTASGQRMAFVQYLSGY 448 G+ITT G+++ +GY Sbjct: 923 GYITTKGGEKLIVSILFNGY 942 >UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Bacteroides RepID=D1K326_9BACE Length = 466 Score = 173 bits (439), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 123/413 (29%), Positives = 192/413 (46%), Gaps = 13/413 (3%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 + + + V + A Y ++ PAS +K+IT++ AL+QLG D+ T+L +G +E Sbjct: 38 SEVGIAVFDLTAGESVYRYQDDKLYRPASVEKIITSVTALVQLGADYTMDTSLRYRGKIE 97 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 N LKG L G DP +D+ +V L G+ + + D S+ S GW W Sbjct: 98 NDTLKGSLYLIGGFDPEFMDEDLDRLVDALASKGIRYVTDTLAADVSMTDSVYWGSGWCW 157 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG--DMAFIRVASYYPVTMFSQVRTLPRGS 211 +D F + +++R C VS+ A K + V+ YY V R G Sbjct: 158 DDTPYSFQPYLSPLMLNRGCVDVSVSPAQKDSLPKVVCTPVSDYYQVHNHGVSRNPQAGK 217 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 + L + N T++G + S P V + L+ GI Sbjct: 218 LKITRNWL----SNGNIITVSGNV---SYPYTEKLNVYTSKDFFFHTFVSRLRSKGIEAR 270 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR-FNVPGTWR 330 V V PL ++L+ LKKSDN+ A+++F + R + T Sbjct: 271 TCTYADCPVTADSIVTLYTVRRPLKEVLERALKKSDNLCAESMFYHLAAKRSLHKRVTGE 330 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISM 389 G+DA+ ++ G + N IADGSG+S +N I+P +++ L+Y H + L F Sbjct: 331 DGTDAIHAFMKTALGFNPENYKIADGSGVSVYNYISPRLLLEYLKYAYYHREVFLPFYES 390 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 LP+AG DG+LQ R + Q G V AKTGS+ GV +LAG++ A+G ++AFV Sbjct: 391 LPIAGVDGTLQNR--MKQTKARGNVHAKTGSVTGVSSLAGYVKAANGHQLAFV 441 >UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Beggiatoa sp. PS RepID=A7C340_9GAMM Length = 405 Score = 169 bits (429), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 116/387 (29%), Positives = 196/387 (50%), Gaps = 13/387 (3%) Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++T AAL L P++RF T +G +NG ++G+LV R G DP L QDI + +K Sbjct: 2 KLVTTAAALHYLSPEYRFKTEFLYQGQRQNGKIQGNLVIRGGGDPRLSSQDIWQIAKQIK 61 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 SG+N+I GN+++D F ++D+AP W + A +A ++ N V + P Sbjct: 62 ASGINEITGNLIVDVHFFDAYDRAPQWETERTQWAYDARLSALALNFNTIVVHVLPGPYI 121 Query: 185 GDM--AFIRVASYYPVTMFSQVRTLPRGSAE--AQYCELDVVPGDLNRFTLTGCLPQRSE 240 G A++ A Y + + + +T+ +G AQ E + PG + ++G LP +E Sbjct: 122 GSRLNAWLDPAPAY-IHLRNMTKTIKKGRTTIFAQRSEKE--PGQV-EIRVSGNLPSHAE 177 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + V+ YA + L++AG+ +G + + G + SA L +LK Sbjct: 178 EKMIRLNVEHPIRYAAESFRAVLQEAGVKINGE-TKVVSTAQFGHKIYEHYSANLSLILK 236 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 + S+N A+ + + I RF PG+ G +++ L +G + N I+ADGSGLS Sbjct: 237 ELNTYSNNFTAEQIVKTIAAERFGTPGSHAEGLKLMKEFL-HISGANTENVILADGSGLS 295 Query: 361 RHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 R N + + L+ + ++ D +F++ L + G +G +R L + GK+ AKTG Sbjct: 296 RRNRMTTQAITGFLKEMHSRFDIGPDFLAALRVMGANGVNSHR--LSNSPAKGKIRAKTG 353 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLS 446 +L GV LAG+++ Q AF +L+ Sbjct: 354 TLNGVSTLAGYVSNQQNQIFAFALFLN 380 >UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Legionella RepID=D1RE40_LEGLO Length = 469 Score = 165 bits (417), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 126/457 (27%), Positives = 231/457 (50%), Gaps = 27/457 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN-------VDEYITQLPAGANLALMVQKVGASAPAIDYH 53 MR+S + L + I F+ QAAN +DE I Q A + + V+ + Sbjct: 1 MRYSNCLCFL-AAILFN-QAANSQTLAEKIDEIIKQQLPHATIGVFVKDAQTGKVIYRRN 58 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 + ++ PAS+ K+ TA AAL QL PDFRF TTL K + +F P+ + Sbjct: 59 ADKLLSPASSMKLFTAAAALYQLKPDFRFATTLFQKDQ--------NYYIKFTGSPSFTQ 110 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +++ ++ + KK+ ++ I+GN++ID+S + + + G ++D+ ++AP A I++ N Sbjct: 111 KNLTELLLSFKKNHISTINGNIIIDSSQYQAPNYPSGTSYDDLGWYYAAPDTAVILNENK 170 Query: 174 FSVSLYSAPKPGDMAFIRVASY-YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 S L SA + G A I+ + + + +QV T+ + E +C L++ N + Sbjct: 171 VSFDLISAKQLGKPAQIKAKTTPNALKLINQVITVSK-EEEKGHCSLNLEIKPDNTIRIF 229 Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 GC+ Q P + A+ D +K L + GI G + + V+ S S Sbjct: 230 GCMIQDKNPKLIELAIPDPILLVKQNIKKILGKNGIVLKGEITSGLSPADAQKVM-SFHS 288 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L L+ ML++SDN+ A+++ + +G++ GT + G+ A++++L + +D+ Sbjct: 289 KSLDKLITHMLQQSDNLYANSLTKKLGYS-LTGKGTHKEGAFAIKKVLSEHTHLDMSQIE 347 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM--LPLAGYDGSLQYRAGLHQAGV 410 + DG G +R+NL+ P ++ +L + D + I + LP AG G+L+ R + + + Sbjct: 348 LVDGEG-TRYNLVTPEQIVLLLSDLYD-DKGIQSILLHALPQAGVSGTLKER--MKKTIL 403 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 D KV AKTGS+ + +L+GF+ + + F ++G Sbjct: 404 DKKVYAKTGSMHDISSLSGFMVNPNEKTYIFSIIING 440 >UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJV1_RHOM4 Length = 497 Score = 164 bits (416), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 130/438 (29%), Positives = 215/438 (49%), Gaps = 44/438 (10%) Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL- 111 H++Q PAS K+ AAL QLGPDFR+ T L G V +GVL+G+L+ R DP + Sbjct: 62 HARQNFTPASVTKLFITAAALEQLGPDFRYVTRLLADGPVVDGVLQGNLIVRGAGDPAIG 121 Query: 112 -------KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPP 164 + R +L++ G+++I G+++ D + F GW W+D+T ++A Sbjct: 122 GRFTDGDRTATFRAWADSLRRRGIHRIAGDLIGDDNYFDDTPLGTGWSWDDLTYWYAAEI 181 Query: 165 AAAIVDRNCFSVSLYS--APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ-YCELDV 221 +A + NC V++ + +PG + + +Y VT+ +Q T+P G + Y L Sbjct: 182 SALSFNDNCVDVTIEARRPGEPGRLTWEPPTTY--VTLINQTYTIPAGQQLKEGYRRL-- 237 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 PG N L +P+ + V + Y +L++ L GI G + + + Sbjct: 238 -PG-TNTIVLFSRVPEGRRDTE-SLTVHNPTRYFVHVLREVLLAEGIAVEGQPVDVDEFS 294 Query: 282 -EPG------TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR-----FNVPGTW 329 +P VA+ S PL ++++++ ++S N+ A+ + R +G R PG+ Sbjct: 295 IKPDYTAPNLWTVATYTSPPLSEIVRVINRRSQNLYAEMLLRTLGAERPVPDSTLTPGSA 354 Query: 330 RAG-SDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL---N 385 G + A R LR AG+D DGSGLS NL++P +++L Y+A H + Sbjct: 355 EMGLAAAARTWLR--AGIDTSRIQFVDGSGLSAQNLVSPEATVRLLAYMAAHPDRAVWRA 412 Query: 386 FISMLPLAGYDGSL---QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 F + LP G + + ++RAG + G V AKTG++ LAG++ TA G+ +AF Sbjct: 413 FYASLPTGGEEATTLQNRFRAGRAR----GNVRAKTGTISNTSALAGYVRTADGRLLAFA 468 Query: 443 QYLSGYAVEPADQRNRRI 460 + + Y V P Q R I Sbjct: 469 IFCNHYTV-PTRQVRRTI 485 >UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Tax=Francisella RepID=B0U095_FRAP2 Length = 485 Score = 164 bits (415), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 120/445 (26%), Positives = 211/445 (47%), Gaps = 21/445 (4%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN-V 92 A +A+ Q+ Y + PAS KV T ++ L+ + DFRFTTT+ N V Sbjct: 59 AKIAIATQRTMTGNDLYSYAQNRSMKPASNNKVFTIVSGLLSIPDDFRFTTTILYPSNRV 118 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLK-KSGVNQIDGNVLIDTSIFASHDKAPGW 151 N +L GD+ +F +P L + +++ +K + G+++I G+V + +F+ GW Sbjct: 119 NNNILHGDMYIKFTGNPALTGGQLSSLIKKIKTEKGISKITGDVYL-VGVFSGPYTPEGW 177 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D T C+ AP ++ ++RNC + L P + +++ + + + Sbjct: 178 SKEDSTLCYGAPASSFTLNRNCTVIKLVKNPNSMTTRVVELSNASNIGIKNSATYTSASK 237 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 A + D N ++G L + +E + A+++ A + D L GI Sbjct: 238 ATI------ISMNDNNVLYISGYLSRTAEKM-FKLAIKNPALKTIDTVNDFLSSNGIKHG 290 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 ++ T + +K SA + LK SDN+ A+T+ IG + G+ +A Sbjct: 291 NVIITGNIPAGYDTQLVTK-SATIGHFFDQTLKHSDNLYAETILNTIGLKEKGI-GSTKA 348 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 G++AV+ IL ++ G+D I DGSGLS + + P M+ L + F + LP Sbjct: 349 GTEAVQSILYKKLGLDTSALTIYDGSGLSHLDRVTPEFMVDFLTKTYNSEVGKQFYNYLP 408 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 +G G++ YR G + G+V AKTG+L GV L+G++ TA R++F L+ ++ Sbjct: 409 ASGISGTISYRMG---GKLLGRVHAKTGTLAGVSTLSGYVLTAKNHRISFSIMLND--LK 463 Query: 452 PADQRNRRIPLVRFESRLYKDIYQN 476 +D+ N R RF+ ++ Y+N Sbjct: 464 HSDRYNAR----RFQDKVVDVFYRN 484 >UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PF66_BACCO Length = 495 Score = 160 bits (404), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 121/419 (28%), Positives = 201/419 (47%), Gaps = 14/419 (3%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G +A+ V+ + + + + PAS K++TA AAL LG + RF T + G + Sbjct: 50 GGIVAISVRSADSGKLLYEQNGNTLLRPASNMKLLTAAAALETLGKNTRFKTGVYRTGAI 109 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 +NG L GD+ + G DP L + D+ + A LKK G+ +I G+++ D S + + P Sbjct: 110 QNGTLYGDIYIQGGGDPALLKSDLADWAAELKKQGIRRIQGDLVGDDSRYDDTRYSLDLP 169 Query: 153 WNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIR-VASYYPVTMFSQVR 205 W+D + + A +A + D + A KPG A I+ V V + + VR Sbjct: 170 WSDEQEYYGAQISALTLSPNRDYDAGTAIFEVVPAKKPGMKARIKMVPESGMVKLVNHVR 229 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T+ G + + G N FT +G + S + AV D A + ++ K L++ Sbjct: 230 TVRDGEQQEDDIVISRAHGG-NTFTASGTITADSAAVRQWKAVWDPAKWVLSVFKKTLEE 288 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 GIT GT ++ +V + V QS PL ++ LK S+N IA+ + + +G Sbjct: 289 NGITVQGT-IKTGRVKDAAVPVLFSQSPPLSSIMVPFLKFSNNTIAEMLVKEMGKTEKG- 346 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 G+W G + +R + G+D ++ DGSG+S +L+ + +L I + D Sbjct: 347 EGSWEKGLEVIRSVA-GNFGMDPDQMMLRDGSGISHADLVRANDLTALLYRIQEKDWFPC 405 Query: 386 FISMLPLAGYDGSLQ---YRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 F LP+AG + L+ R G+V AKTGS+ GV L+G++ SG+++ F Sbjct: 406 FFDALPVAGAENRLEGGTLRNRFKGTAARGQVFAKTGSITGVSTLSGYMQATSGEKLIF 464 >UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=bacterium Ellin514 RepID=B9XRU4_9BACT Length = 514 Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 121/426 (28%), Positives = 208/426 (48%), Gaps = 38/426 (8%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADP 109 ++ + ++ PAS K+ T AL +LGPD+R T+L KG ENGVLKGDLV DP Sbjct: 70 EHDANKLCSPASNSKLYTMAMALDRLGPDYRIKTSLYAKGKPDENGVLKGDLVIYGRGDP 129 Query: 110 TLKRQ--------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 T+ + ++ V L +GV QI G+++ D S F GW +D+ + Sbjct: 130 TINLKLHGNSMDMALQPFVDVLTNAGVKQISGDLIGDDSYFKQPPYGSGWSCDDLENYYG 189 Query: 162 APPAAAIVDRNCFSVSLYSAPK---PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 A +A ++ N + + A + P ++ + Y + + ++ +T+ RG Q+ Sbjct: 190 AEISALTINDNELILKVKPATQEGAPCELTLVPSTGY--LQLINRTKTVARG----QHRN 243 Query: 219 LDVV-PGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-- 275 +++ P N + G + + A +L + L + GI +G++ Sbjct: 244 INLYRPLGENVVYVEGEMAVDDAGSNEDATFHNPAGMFVTLLNETLAKRGIKITGSVRTV 303 Query: 276 ----RQTQ--VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG-- 327 R+ Q +E + + S P+HD+++ + K S N+ D + +G + PG Sbjct: 304 NWKDREVQPFKSEEWVELGAVSSLPMHDIIREVQKPSQNLYTDLMLLHVG-TKTAKPGAA 362 Query: 328 -----TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 T G A+R L + G+ TI +GSGLSR N+ PA +++LQ++ H Sbjct: 363 MEGTTTEELGIKALRTFL-SEIGIKRNETIFDEGSGLSRDNVTTPAATVKLLQHMGHHKC 421 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 +I+ LP+AG DG+L+ R + + V AKTG+L+ +L+G++TTASG+R+ F Sbjct: 422 SDVYITALPIAGVDGTLRKR--MKGTAGENNVHAKTGTLRWANSLSGYVTTASGERLVFS 479 Query: 443 QYLSGY 448 L+ Y Sbjct: 480 MMLNRY 485 >UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=2 Tax=Bacteria RepID=Q1II05_ACIBL Length = 518 Score = 155 bits (393), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 129/435 (29%), Positives = 204/435 (46%), Gaps = 54/435 (12%) Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTL 111 +S ++ PAS K+ T A LGPDFRF TT+ET G V+ G L DLV DP L Sbjct: 61 NSDKLFTPASNTKLFTTSTAFALLGPDFRFHTTVETSGTVDKRGRLDSDLVIVGRGDPNL 120 Query: 112 ------------KRQD----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 ++Q + N+ L + GV +DG+++ D S +A GW +D Sbjct: 121 SGRTLPYNLRTERKQPPIAALENLADQLVQKGVRYVDGDIVADDSYYAFERYGEGWAQDD 180 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA---SYYPVTMFSQVRTLPRGSA 212 + + AP +A V+ N VS+ A + G+ AF+ + +YY V ++V T P+G+ Sbjct: 181 LVWEWGAPVSALTVNDNVIFVSIQPADRVGERAFVDITPFPAYYRVD--NRVMTTPQGTG 238 Query: 213 EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 + ++ PG N+ TL G +P + A A++D A + + ++ L + G+T G Sbjct: 239 PRK-IYINREPGS-NQLTLWGNIPVDDQGANEALAIEDPADFTAKLFRELLDKRGVTVYG 296 Query: 273 T-LLRQTQVNEPGT-------------------------VVASKQSAPLHDLLKIMLKKS 306 + T++ T V+ S PL LK++ K S Sbjct: 297 RPKTKHTELASLSTFSITATASAGGGADRAPAPVSRLPLVLGQYDSQPLSADLKVINKVS 356 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 N+ A+ + R++G + GT G + R L A + + DGSGLSR +L Sbjct: 357 QNLHAELLLRLLGKEK-GTAGTIEGGLEVERAFL-ASADIRPEEYTLYDGSGLSRQDLAT 414 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P +++L Y + F LP+AG DGSL R ++ +V AKTGSL V + Sbjct: 415 PHAFVKLLTYAHKQPWGATFEDTLPVAGVDGSLVER--FTKSTAQSRVHAKTGSLDHVNS 472 Query: 427 LAGFITTASGQRMAF 441 L+G++TT G+ + F Sbjct: 473 LSGYLTTEKGEHVVF 487 >UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cystobacterineae RepID=Q1DDE3_MYXXD Length = 748 Score = 152 bits (383), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 111/415 (26%), Positives = 207/415 (49%), Gaps = 17/415 (4%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV- 92 + + +++Q + A +++ ++ PAS K++T+ AAL LGP+FR+ T + + Sbjct: 56 SRMGVLMQSLDDGAVVFSHNADELLNPASNVKLVTSAAALASLGPEFRYDTEFLVEPELG 115 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 +G +K L R DP++ + + +VA L +GV + G +++D S F + PG+ Sbjct: 116 ADGKVK-TLYVRGKGDPSMTTERLWGIVAELWHAGVRDV-GEIVVDDSWFDAERTPPGYD 173 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV---ASYYPVTMFSQVRTLPR 209 D + + AP A ++ N ++ L PG + + + Y+ V +Q+ T PR Sbjct: 174 QEDTDRAYMAPTGAVSLNWNAVAIYLRPGNAPGAKGVVEMDPPSDYFVVE--NQLTTGPR 231 Query: 210 GSAEAQYCELDVVPGDLN-RFTLTGCLP-QRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 A+ + P L + + G LP +R + + + + Y G LK L G Sbjct: 232 ---RARRVSVTSDPSGLQQKIVVRGQLPGERGGAVSVWKKIDNPPMYFGQSLKQMLVTRG 288 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 + G + + + + ++ QS LLK + K S N +A+ + + +G PG Sbjct: 289 VKMKGKV-KLGKTSTKARMLHVSQSDTFDVLLKRLNKLSSNFVAEQLLKTMGAELRGSPG 347 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNF 386 ++ G D V Q L + G+ G ++ +GSGL+ N + + Q+L+++ Q + Sbjct: 348 SFTKGVDVVEQFLERDVGIPRGTYVMKNGSGLNDANRFSATQLNQLLRHMVQRFPFSPEY 407 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 +S +P+AG DG+L+YR + G++ AKTG+L+ V L+G++T+A G+R F Sbjct: 408 LSSVPIAGKDGTLKYR--FEGSDAVGRLRAKTGTLESVSALSGYVTSAGGERFTF 460 >UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1R5_SALRD Length = 498 Score = 149 bits (375), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 130/458 (28%), Positives = 212/458 (46%), Gaps = 48/458 (10%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 GA + V + ++ + PAS K++TA AAL +LGP +R+ T L G V Sbjct: 40 GALWGIEVTNLETGERLFQHNPDHLFTPASNAKLLTAAAALRRLGPSYRYNTRLYVDGPV 99 Query: 93 ENGVLKGDLVARFGADPTL----KRQD----IRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 NGVL+G+L+ R DPTL +R D R+ +L+ +G+ +I+G++L D + F+ Sbjct: 100 RNGVLRGNLIVRGSGDPTLGGYAQRDDPTAVFRDWADSLRAAGITRIEGDILGDDNPFSD 159 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL----YSAP-----KPGDMAFIRVASY 195 GW WND+ ++A + + N + + AP P + F+RV Sbjct: 160 VPLGDGWSWNDVPYAYAAEINGLVFNGNTIDLEVRGRQVGAPGRVTWSPFETDFVRVR-- 217 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 +Q RT+PR S + E P N FT+ + +E + + Y Sbjct: 218 ------NQSRTVPRDSTSDEDYER---PFSENTFTVRSRI-HPNEVQEETLTITEPTKYF 267 Query: 256 GAILKDELKQAGITWSG-------TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 L+ L + GI+ G + L + V + +S PL ++++ M +S N Sbjct: 268 THTLRSVLLREGISVGGQGRDVDDSPLTPRYEADSVRRVGTYRSPPLREVVQTMNHESQN 327 Query: 309 MIADTVFRMIG-------HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 + A+ + R + A G+ G+ AVR L + G+D + DGSGLSR Sbjct: 328 LYAEQLLRTLAVVGPPDTTADDLTEGSAALGALAVRTEL-SEVGIDTSRVRVVDGSGLSR 386 Query: 362 HNLIAPATMMQVLQYI---AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 N + P M ++L ++ A D F LP+ G +G+L+YR A G+V AKT Sbjct: 387 KNYVRPRAMTRLLVHMWSEAPSDRRAAFYDSLPMGGREGTLEYRF-PRGAAARGEVRAKT 445 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G+L G L+G++ T G +AFV + + + + D R Sbjct: 446 GTLTGASALSGYVRTPRGTPLAFVIFCNHHLADAEDVR 483 >UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q300_9BACT Length = 497 Score = 148 bits (374), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 118/468 (25%), Positives = 205/468 (43%), Gaps = 37/468 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQA-----ANVDEYITQ-----LPAGANLALMVQKVGASAPAI 50 MR I L +C+ V+ +++E I L A+ + V + + P + Sbjct: 12 MRSCIIFIALFTCLTLPVKVIKAEPTHLNEQIRNILQKYLLKNAHCGISVVSLKTNTPVV 71 Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADP 109 +Y S + + AS K+ T AL LG DF++ T++E GN++ +G L+G+++ R DP Sbjct: 72 NYQSNDLFMVASNMKLATTATALEYLGTDFKYNTSVEADGNIKSDGTLEGNIIIRGSGDP 131 Query: 110 TLKRQDIRNMVATL--------KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L + N + T+ K G+ +I G+++ D SIF + WP N + + + Sbjct: 132 NLSGRFYNNNILTIPNAWLQATKNLGIQKITGDIVADDSIFDRNYINDAWPKNQLHEWYC 191 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 AP + + NC + + + P T F + ++E + + Sbjct: 192 APTSGLSFNDNCIDIIFVPRNNVNKKVSLLIE---PNTSFVTIHNECIYTSEEKQHAYSI 248 Query: 222 V--PGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL---- 275 PG N + G + +V + Y + K+ LK GI+ G Sbjct: 249 YRKPGT-NDIYVKGKFWTNASQKREWVSVHSPSLYLATLFKEMLKNGGISVFGIARLINE 307 Query: 276 --RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 R + N+P + ++ + + + I K+S N A+ + + +G A G G Sbjct: 308 NDRISYSNKP--IKIAQTISTMEQSIHITNKRSQNFYAEQIIKTLG-AHIKGCGNTENGL 364 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 + ++ + G D I DGSGLS+ N ++P + +L Y+ H + F LP++ Sbjct: 365 QVISAFMK-KLGYDSEEYKIRDGSGLSKENKLSPNMITTLLSYMNTHKHGKVFCDSLPIS 423 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G DG L R Q GK+ AKTG + G L+G+I T+ G R+AF Sbjct: 424 GIDGGLHRRMASLQ--YKGKIHAKTGYIAGASALSGYIDTSKGDRLAF 469 >UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC611F Length = 477 Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust. Identities = 125/482 (25%), Positives = 228/482 (47%), Gaps = 50/482 (10%) Query: 8 IGLTSCIAFSVQAAN-------VDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 I L+SC V + V E++ ++ +L+ + D+ + + Sbjct: 14 IFLSSCTKLPVSSGELSSQPKVVKEFVKAEIVEHGDLSFYAVDLKTGKVVADHRGKSALV 73 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQDIR- 117 PAS K+IT+ AAL +G D F T L +GN+ ++G+LKG L + G DPTL I Sbjct: 74 PASVMKIITSAAALEVMGGDKTFETKLMYEGNINKDGILKGTLYIQGGGDPTLGSDGISA 133 Query: 118 -------NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG-WPWNDMTQCFSAPPAAAIV 169 + V +KK+G+ ++G++++ +F +D PG W W DM ++ + Sbjct: 134 APEAFLADWVKEMKKAGITSVNGDIIVLDDLFG-YDGIPGKWLWEDMGTDYAPGTYGISI 192 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYP----VTMFSQVRTLPRGSAEAQYCELDVVPGD 225 N +++ L S+ PG ++ P +T +Q P G + + VP + Sbjct: 193 FDNIYTLYL-SSGAPGTTP--KIIGTKPEMKDLTFDNQAVVSPDGKRD---IYVRGVPFE 246 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG--TLLRQTQVNEP 283 NR G +PQ + + + + D + G D +K+ GI ++G T R T Sbjct: 247 -NRRGFYGIVPQDKKEITIKSDIPDPGLFLGQYFSDYMKKNGIKFNGKVTTARLTAKRPK 305 Query: 284 GTVV-ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR-FNVPGTWRAGSDAVRQILR 341 TVV A +SAP+ +++K++L +SDN A+ +F+++ NV W+ Sbjct: 306 NTVVIAVTKSAPVSEIIKVLLTRSDNHYAEHLFQILEKVEGVNVVEFWK----------- 354 Query: 342 QQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQY 401 + G+D+ + + DGSGLSR + ++ + V+ Y+ + EL F + P+AG +G++ Sbjct: 355 -EKGLDVDSLTMRDGSGLSRGDTLSTKLLTDVIMYM-DNKKELKFEELFPVAGKEGTVA- 411 Query: 402 RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIP 461 + L ++ K K+GS+ G+ + AG++ +R AF ++ + E + R Sbjct: 412 -SFLKNTPLNEKARIKSGSMGGIQSYAGYL-EKDNKRYAFAIIVNHWNGERTELRTEMEK 469 Query: 462 LV 463 L+ Sbjct: 470 LL 471 >UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alvinella pompejana epibiont 6C6 RepID=Q6W3N7_9PROT Length = 470 Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 113/430 (26%), Positives = 214/430 (49%), Gaps = 25/430 (5%) Query: 25 EY-ITQLPAGAN-LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRF 82 EY I+ +P + ++ ++ + + +++ + PAS K++T A ++ LG D+R+ Sbjct: 27 EYRISSIPLSKDSYSIYIKGLDSGQEIASWNTYRAMKPASVIKLLTTYAGVLGLGFDYRW 86 Query: 83 TTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF 142 T G ++NG L G+L+ + DPTLK +DI ++V ++ G+ +I G+++ID +IF Sbjct: 87 ETKFFHSGYIKNGTLHGNLIIKASGDPTLKSRDIPSIVDNIQSLGIRKILGDIVIDRTIF 146 Query: 143 -------ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 + DK P+N M P A +R +L PK + RV + Sbjct: 147 QVPWQNSSRFDKNRYSPYNAM------PDAMMFNERKS---TLCVTPKGRGVRLNRVDND 197 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT---LTGCLPQRSEPLPLAFAVQDGA 252 + ++++ + R + D N+ + L+G L +R + V Sbjct: 198 RSYRVVNRLKVVNRSCKSGYSWPKVTIKTDANQRSTIFLSGKLSKRCGTRKICKVVSMPH 257 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 LK E+ + GI + GT L+ +V++ + S S L ++L I+LK+S+N++A Sbjct: 258 RAFYYALKSEIGRRGIKFLGT-LKLRRVSKRDRYIFSHFSPTLEEVLPIILKRSNNLVAR 316 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 +F IG + P S AV+++L+ + + TII +GSGLSR + ++ T+ Sbjct: 317 QLFLTIGTTYYQPPINTLKASTAVKRLLKHRHILADDYTIIQNGSGLSRVSRVSTKTLAN 376 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 +L+ A + ++ L +AG DG+++ R + V G+ KTG+++ V N+AG++ Sbjct: 377 LLE-DAYFNYGYRWLDSLSIAGIDGTIRRR--FQNSSVYGRAWMKTGTIKSVANIAGYVE 433 Query: 433 TASGQRMAFV 442 SG++ + Sbjct: 434 GISGEKFVVI 443 >UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDV4_RHOM4 Length = 477 Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 126/419 (30%), Positives = 197/419 (47%), Gaps = 31/419 (7%) Query: 38 LMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVL 97 L V V + + +++Q LPAST K++T AAL LGPD+R+ T L G V+ L Sbjct: 46 LYVADVESGRVLVAQNAEQGLLPASTHKLLTTAAALDLLGPDYRYQTVLYFVGQVDGATL 105 Query: 98 KGDLVARFGADPTLKRQD------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 +GDL+ R DPT +R L + G+ +I+G ++ D + F A GW Sbjct: 106 RGDLILRGSGDPTFGSPSWPGPDPLRTWAQELARMGIRRIEGRLIGDDNRFDDRPYADGW 165 Query: 152 PWNDMTQCFSAPPAAAI--VDRNCFSVSLY-SAPKPG-DMAFIRVASYYPVTMFSQVRTL 207 + +T + A+ + + V L+ A +PG +AF + Y +T+ ++ T Sbjct: 166 DIDYVTTQINLGLGFAVGGLSYHDNIVRLHMQATRPGAPLAFTQEPFDY-LTIENRAYTA 224 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 R EA E + LTG +P + V + YA A + L+QAG Sbjct: 225 ARRYGEAIRIERAFAS---EQVRLTGSVPATYRGT-IELPVANPTRYALAAFRHYLEQAG 280 Query: 268 ITWSGTLLRQTQVNEPGT-----VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 IT + L ++ P + S PL ++++++ +S N A+ VFR + Sbjct: 281 ITVAAELFDVDELPAPPRYDRRHALLVHFSPPLAEIVRVINHRSHNFYAEQVFRTL---- 336 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 + G+ + +R L++Q G+D I DGSGLSR NL+ PA + Q+L + H N Sbjct: 337 -SPDGSAEGAARRIRAFLQRQ-GIDTRGLTIRDGSGLSRKNLVPPAVLGQLLVAMQHHPN 394 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 F++ LP G R+ L D V AKTGSL V L+G++TT G +AF Sbjct: 395 RDAFVASLPQGG-----TRRSTLEDRLRDVPVRAKTGSLLHVRTLSGYLTTRDGHTLAF 448 >UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEI1_BACSK Length = 489 Score = 145 bits (367), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 124/439 (28%), Positives = 204/439 (46%), Gaps = 24/439 (5%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMAL-PASTQKVITALAALIQLGPDFRFTTTLETKG 90 AGA++A+ V+ GA+ + H+ M L PAS+ KV+TA+AAL +LG D F TT+ T G Sbjct: 48 AGASVAVSVRD-GATNELLFEHNGNMLLHPASSMKVLTAVAALTELGSDHTFKTTVFTDG 106 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + VL G++ + G DPTL ++ + ++ G+ +I+G+++ D S + + Sbjct: 107 KISKRVLHGNVYIKGGGDPTLMEAELNELAQEVRNKGIKKINGDIIADESRYDDVRLSQD 166 Query: 151 WPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVA-SYYPVTMFSQ 203 W+D + A +A + D V + K G + V + ++ Sbjct: 167 LNWSDESFYTGAQVSALTLSPTDDYDAGTILVEVTPGKKAGQKPIVTTQPDVKAVPIINE 226 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 T+ ++ E + D+ +TG +P + AV + A Y A+ K L Sbjct: 227 AVTVAAEEQKSLKIEREHGKADIR---ITGNVPIGASATRSWVAVWEPAQYTTAVFKQAL 283 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 AGI V + A ++S PLH+LL LK S+N + + + IG+ + Sbjct: 284 NNAGIDIKKADETIGYVPKKAVKQAERESMPLHELLVPFLKLSNNGHGEVLVKEIGYVKE 343 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+W AG V + Q G ++ DGSG+S L+A + VL + Q Sbjct: 344 G-EGSWDAGLPLVAESTEQLGAS--GPLLLRDGSGMSHKTLVAANDLTSVLYHAQQQHWF 400 Query: 384 LNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 +F + LP+AG G+L+ R G G++G+V AKTGSL GV +L G+ T G Sbjct: 401 TDFYNGLPVAGEKERLVGGTLRNRLG----GIEGEVRAKTGSLTGVSSLTGYARTNDGDS 456 Query: 439 MAFVQYLSGYAVEPADQRN 457 F ++ + E R+ Sbjct: 457 YLFTIMVNNFIGESQTIRH 475 >UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIK8_NATMA Length = 457 Score = 145 bits (366), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 111/383 (28%), Positives = 180/383 (46%), Gaps = 36/383 (9%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 LPAS K++TA A +LGP +RF TTL G ++ G L GDLV L + D+ Sbjct: 57 LPASNTKLVTAARAFDELGPAYRFETTLHADGPIQEGHLLGDLVLTGYGAADLSQGDLLA 116 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF---- 174 + + +G++ + G ++ID S F PGW W+D + A ++RN Sbjct: 117 LAEDIADAGIDTVAGELVIDASAFDRQSLGPGWTWDDGQFEYGAKSTPLALERNTVDITV 176 Query: 175 -----SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 SV++ ++P +R+ S Q+ + ++E E + PG Sbjct: 177 SHRNGSVTVDASPT---SEIVRIESDVTTGPTEQLEVYKKRASEVIRVEGQIPPG----- 228 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVA 288 E A V D +AG++L+ L+ G+T G T + V+ G A Sbjct: 229 ----------ETTVEASPVDDPMMHAGSLLRQALESTGVTIDGWTRIEHDPVDTDGPPCA 278 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 + +S+PL ++ ML SDN +A+ + R + + G+W A V L + G D Sbjct: 279 AVESSPLSAQVRTMLVTSDNFVAEQLARTVA-LELDGEGSWNAWETHVNDFLEAR-GADA 336 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 + + DGSGLSR+NL++ + + VL++ + LPLAG +G++ R L A Sbjct: 337 AH--LRDGSGLSRYNLLSASGIAAVLEWSLDQPWGDRYRRSLPLAGVEGTVSNR--LEDA 392 Query: 409 GVDGKVSAKTGSLQGVYNLAGFI 431 + V AKTG+L GV L+G++ Sbjct: 393 PL--PVRAKTGTLTGVRTLSGYV 413 >UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M0Q1_BACS4 Length = 494 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 111/400 (27%), Positives = 193/400 (48%), Gaps = 22/400 (5%) Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 Q+ PAS K++T++AAL LGP++ FTT L GN +LKG++ + D TL Sbjct: 75 NQLLTPASNMKILTSIAALELLGPNYHFTTELLIDGNTRWQLLKGNVYIKGKGDATLLPT 134 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAI------ 168 DI +V+ LK+ G+ I G+++ D S F S PW+D + AP +A Sbjct: 135 DIEKLVSELKQQGIKYIFGDIVADDSWFDSIRHPIDMPWSDEMYGYGAPISALTVAPKKN 194 Query: 169 VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV--RTLPRGSAEAQYCELDVVPGDL 226 V+ + + + G A I+ P T + +V ++ +E + G Sbjct: 195 VEGGTIIIEIMPNEQIGQPAVIKTV---PDTEYVEVINESITVTDSERNNISIKKKHG-T 250 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV 286 N+ + G + Q + + +V + +Y + + LK+ I G + E + Sbjct: 251 NQIYINGHINQTEKKIEKLMSVWEPTNYVLHLFSEYLKKEEIRHLGNVTLGDTPKE-AKL 309 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 S+PL +LL +K SDN++ +++ + +G ++ G+W G A+++ L + Sbjct: 310 FTVHHSSPLSELLFPFMKYSDNVLGESITKEMGKFKYG-DGSWECGLRALQEAL-AHYDM 367 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQY 401 NTII DGSG+S N I+ + ++L I + F S LP++G+D G+L+ Sbjct: 368 KTENTIIRDGSGISHVNAISTNDITKLLYEIKKEHWFPLFKSSLPISGHDSKYLGGTLKD 427 Query: 402 RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 R + + GKV AKTG+L V +L+G++ T + + F Sbjct: 428 R--FTNSRMKGKVKAKTGTLTSVSSLSGYLETKGEESIIF 465 >UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7M7_9PROT Length = 459 Score = 143 bits (361), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 112/411 (27%), Positives = 202/411 (49%), Gaps = 13/411 (3%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 ++ V+K+GA AI +++Q PAST K++T A L LGP + + T G +ENGV Sbjct: 40 SITVRKIGAPKAAISINAEQPMNPASTMKLLTTFAGLELLGPAYTWKTEAYLDGKLENGV 99 Query: 97 LKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM 156 L+GDL+ + DP + +A L+ G+ +I GN++ID S F G ND Sbjct: 100 LQGDLILKGYGDPKFTIEQFWLWMAELRARGLREIRGNLVIDRSFFDLPQLDSGAFDNDP 159 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 + ++ P A +++ N ++ L P+ + I V + SQ+ P+ + + Sbjct: 160 VRAYNVTPDALLLNFN--TLRLRYIPEGNRLRVIIEPMLEGVRLDSQLA--PQAGSCEDW 215 Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR 276 + V + R L G P + +V + Y A+ + Q G + +G R Sbjct: 216 DDTIRVQANDERLLLQGGYPAECGEREHSLSVLSHSRYVDAVFRAAWHQLGGSLTGR-QR 274 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG-HARFNVPGTWRAGSDA 335 ++ + ++ +S P+ ++ + K S+N++A +F +G ++PG+ + A Sbjct: 275 DGLLSSSAQLFSTHRSEPMSLAIRDINKYSNNVMARQLFLTLGTTTSASIPGS----TAA 330 Query: 336 VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGY 395 +R L ++ G++ ++ +G+GLSR I+ M Q+LQ I + I+ LP+ G Sbjct: 331 MRSWLTKK-GLNFPELVLENGAGLSRVERISAEHMAQLLQSITESPYSAELIASLPILGI 389 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 DGS++ R L + KTG+L GV LAGF+ SG++ + V +++ Sbjct: 390 DGSVKKR--LKNSPAASHAHLKTGTLDGVKTLAGFVQAHSGKQWSVVFFIN 438 >UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4D8_METFK Length = 468 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 123/441 (27%), Positives = 197/441 (44%), Gaps = 31/441 (7%) Query: 18 VQAANVDEYITQL------PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + AA + E +++L PA N+A+ VQ+V S+P +D+ S + AST K+++ A Sbjct: 17 LHAAAIPEPVSELLRKSGIPA-ENVAVYVQRVDQSSPLVDHQSDRPMKTASTMKLLSTYA 75 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 L LGP +R+ T + G++E+GVL G+L+ + DP L D+R M+ L+ +GV I Sbjct: 76 GLELLGPGYRWRTQVYHDGSLEDGVLHGNLIIQGRGDPYLLAADMRMMLENLRLAGVEDI 135 Query: 132 DGNVLIDTSIFAS--HDKA-----PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 G++++DT FA HD A P P+N + F+ N S S + + Sbjct: 136 QGDIVLDTHYFARRFHDTAEFDGKPHAPYNAVPNAFAV---------NIKSTSFHFLVER 186 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP---GDLNRFTLTGCLPQRSEP 241 G +A I P L RG L V G+ T G P Sbjct: 187 GKLA-IEADPILPEIHIHNQTNLVRGECGDWKSRLRFVVEPMGNEVAVTFKGDYPLACGS 245 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 L V + YA + + G G R + E ++ + S PL ++++ Sbjct: 246 KTLELNVLEDGPYAYGLFRSNWLSLGGKLQGG-WRYGVLPEDARLLLTHDSLPLSEIIRT 304 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 + K S+N++ +F +G R + P G AV+ L + G+ ++ +GSGLSR Sbjct: 305 INKYSNNLMVRQLFLTMGAERVSSPAMEADGVLAVKAWLASK-GLHFPELVLENGSGLSR 363 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 H I M L ++S LP+ DG++ R L + G KTG++ Sbjct: 364 HEQITARHMAAFLLAAYASPVMPEYLSALPIPSVDGTMANR--LRHSEARGSAHLKTGTI 421 Query: 422 QGVYNLAGFITTASGQRMAFV 442 GV LAG++ G+R V Sbjct: 422 NGVSALAGYVHDRRGRRWVAV 442 >UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AA2_SOLUE Length = 502 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 123/424 (29%), Positives = 205/424 (48%), Gaps = 44/424 (10%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTLKRQDI- 116 +PAS K+ + AL +LGPD+ F T + ++ G + GDL G DP L + I Sbjct: 68 VPASNAKLFSTALALTRLGPDYTFQTRVFADAPPDSQGRISGDLRLIGGGDPNLSARAIP 127 Query: 117 --------------RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSA 162 ++ L G+ + G+++ D + + A GW +D Q Sbjct: 128 YRMGPPTGNPLAAIEDLADQLAARGIRIVSGDIVGDDTWYVWQPYAVGWAIDD-PQSDDG 186 Query: 163 PPAAAI-VDRNCFSVSLYSAPKPGD---MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 PP +A+ + N ++S++ G+ +AF +Y + ++VRT+ G + Sbjct: 187 PPISALTLSDNALNLSVHPGAAVGEVAELAFSPPLEFYRIE--NRVRTVAAGGE--RRVH 242 Query: 219 LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL---- 274 +PG + L G +P R + +V+D A +A L++ L+ GIT G Sbjct: 243 FHRIPGSRDA-VLWGTIPLRDRGQDMLTSVEDPAEFAAEALRNALEARGITVEGAARSQH 301 Query: 275 --------LRQTQVNEP--GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 L Q +E G +A++ SA L + L++ K S N+ A+ + R +G AR N Sbjct: 302 LFPNQLADLTQAPPSEAVGGVELANRSSARLVEDLRVTAKVSQNLHAELLLRAVGRARRN 361 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 V G++ AG ++ I AGV+ + DGSGLSR +L+ PAT++++L+++ Sbjct: 362 V-GSFEAGMTEMK-IFLADAGVEPTGYNLLDGSGLSRLDLVTPATVVRLLRFMYDSPARD 419 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 N++S+ P+ G DG+L R G A G+V AKTGSL V L+G+I G +AF Sbjct: 420 NWLSIFPIGGQDGTLSTRFGGTPAA--GRVLAKTGSLSHVSALSGYIQRLDGTWLAFSIL 477 Query: 445 LSGY 448 ++ Y Sbjct: 478 VNNY 481 >UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bacteroidales RepID=A6LH98_PARD8 Length = 485 Score = 142 bits (359), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 128/467 (27%), Positives = 215/467 (46%), Gaps = 33/467 (7%) Query: 10 LTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 L SC+ SV A V + I Q GA+ +L+V+ V Y + + PAS Sbjct: 10 LISCLYLSV-GAQVPQPIKQFLRKPYMEGASFSLIVKDVHNGETVFAYDTLRQLTPASVM 68 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL--------KRQDI 116 K +T AL LG D+RF TTL G++E G+LKG+L + DP+L ++ + Sbjct: 69 KTVTTATALEILGEDYRFPTTLAYDGSIEKGLLKGNLYIKGSGDPSLGSAHFAPYHKRFL 128 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 + ++ LKK G+++I G V+ D SIF + + W DM + A V N + + Sbjct: 129 QEWISALKKVGIHKIQGAVIADESIFDTEGTSFKWVGEDMGSYYGAGSYGLCVFDNLYKL 188 Query: 177 SLYSAPKPGDMAFIR-VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 L + PG ++ F T + S+++ + + P +R+ L G + Sbjct: 189 GLQTGA-PGSRPKLKGTEPELSGIHFHNYLTAQQVSSDSSF--IVGAPFATDRY-LYGIV 244 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT-----LLRQTQVNEPG--TVVA 288 P E PL + D A + L +L+ GIT + +LR+ +PG T + Sbjct: 245 PANREWYPLKGDIPDPALFLADYLTRQLEHEGITVGESPSCFRILREAGRWQPGKRTEIV 304 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR---QQAG 345 + S L +++++ S N+ AD + + IG G + + Q+LR Q G Sbjct: 305 TTYSPTLREIVEVTNHVSHNLFADALIKTIGLRYTPRKGEVISSFNRGIQVLRDYWQGKG 364 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGYDGSLQYRAG 404 +D+ + DGSGL+ N ++ A + +L Y+ + F LP+AG +GS+ R Sbjct: 365 LDLSCVWMYDGSGLAVTNKLSTAFVADLLIYMRTRSQQHTAFYESLPVAGVEGSV--RNF 422 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 L + + GK K+GS+ V AG+I Q A +++ Y+ + Sbjct: 423 LKGSSLQGKAHLKSGSMSRVKGYAGYINKGDKQ-YAIALFVNNYSCD 468 >UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZME1_9GAMM Length = 488 Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 111/430 (25%), Positives = 202/430 (46%), Gaps = 17/430 (3%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 ++ L VQ+V A ++ PAST K+ T+LAAL +LGP++ +TT + V++ Sbjct: 57 SVGLWVQRVPDGAVLARLNADTPYNPASTVKLATSLAALHELGPNYTWTTEIWATRPVQD 116 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 GVL+GDLV R DP + ++ M+ L+++G+ +I+G+V++D S F + PG Sbjct: 117 GVLRGDLVIRGTGDPGMVTEEYWRMIGELRRTGLKRIEGDVILDASHFQLPNGDPGDFNR 176 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 + ++ P A V+ N + + + + + + ++++ G E Sbjct: 177 QPLRAYNQLPYALHVNSNSQRFHVRPERRGNGIDVVVDPPLPGLEVVNRLQPTRGGCGEW 236 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL 274 Q V + R T +G P + +V + + + Q W G L Sbjct: 237 QRGIQFNVDQNAQRVTFSGQYPVNCGNYEMLRSVLTPEANHAEMFRMAWDQ----WGGEL 292 Query: 275 LRQTQV-------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 + + +EP + +S PL DL+++ K S N+++D + +G + P Sbjct: 293 TGRVRTGVLPVLHDEP---IVRHRSRPLSDLIRVSNKWSSNVMSDHLLLTLGARKNGPPA 349 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T G +A+ LR GVD+G ++ +GSGLSR + + ++L+ +H + F Sbjct: 350 TMDKGREALVHSLRD-LGVDVGGMVVDNGSGLSRDARMTARQLGEILEAGWKHPHRPEFQ 408 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 S L L+G DG+L+ R + G++ KTG + V +AG++ T+SG + ++G Sbjct: 409 SSLALSGLDGTLRNR--FRNGDLRGQMHLKTGHINEVSAVAGYVRTSSGDDVIVTVLVNG 466 Query: 448 YAVEPADQRN 457 RN Sbjct: 467 PRAHIGHGRN 476 >UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7Z9_ALHEH Length = 480 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 120/443 (27%), Positives = 199/443 (44%), Gaps = 26/443 (5%) Query: 9 GLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 GL +A +V VD +++ VQ+VG P + + PAS K++T Sbjct: 28 GLPDALAQAVDRLGVDR--------EQVSIWVQRVGEPEPLLAHQVDTARNPASVLKLVT 79 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 + AAL LGPD+R+ T L G V +GVL+GDL+ R G DP L ++ + L++ GV Sbjct: 80 SFAALEGLGPDYRWRTELYALGPVRDGVLEGDLLIRGGGDPFLVTEEFWKLTGALRRQGV 139 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 +I G+++ D S F + + PG + ++ PP +V+ N S + KP Sbjct: 140 REITGDLVYDLSYFNLYPEDPGAFDGRPHRAYNQPPHPLLVNFNAISFEI----KPTTGG 195 Query: 189 FIRVASYYP---VTMFSQVRTLPRGSAEAQ----YCELDVVPGDLNRFTLTGCLPQRSEP 241 RV + P +T+ +++ G Q + ++ G L L G P + Sbjct: 196 APRVVADPPLPGLTLDNRLGLRQSGCGGFQRGIAFQVVEQPGGSLPGVLLEGRYPSHCDE 255 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV-VASKQSAPLHDLLK 300 L V Y + Q G ++G R+ + PG V +S PL LL+ Sbjct: 256 WRLVRTVLPVEDYVHQLFTLLWGQWGGIFAGG-WREGRGPAPGAEPVVVHESPPLGQLLR 314 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 ++ K S+N++ + +G + P T G +V +L G+D + +G+GLS Sbjct: 315 LVNKYSNNVMTRHLKLTLGAEHYGAPATSEKGRRSVLDVLHAH-GIDTAGIVFDNGAGLS 373 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD-GKVSAKTG 419 R I + Q+L + F+S L +AG DG++ R Q G + G++ KTG Sbjct: 374 RDTRITARQVAQLLTVARERPWMAEFVSSLAIAGTDGTMGRR---FQDGPERGRMHLKTG 430 Query: 420 SLQGVYNLAGFITTASGQRMAFV 442 L V +AG++ + + V Sbjct: 431 HLNDVAAIAGYLHPPGAEPLVAV 453 >UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geobacter sp. M18 RepID=C6MX86_9DELT Length = 503 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 126/404 (31%), Positives = 194/404 (48%), Gaps = 25/404 (6%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 D++ + + +PASTQK+ TA AAL LGPD TT++ LKG D Sbjct: 94 DFNPRLLLVPASTQKLFTAAAALSLLGPDREVTTSVALDAAGGRAYLKG------CGDSL 147 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 L D+ + A + ++ D S F + GW W+D S + Sbjct: 148 LSGADLAALAAAAASKMDKGREYSLAADLSCFDDLYRGKGWMWDDDEMLISP------LS 201 Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVV--PGDL-N 227 N +V+L P PG A V + P T + V L R + + PGD N Sbjct: 202 VNQNAVTLLVQPGPGAGAPA-VVTAEPHTSYYTVENLARTGTGKEPSSIQAARRPGDRDN 260 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 T+TG + S PL +V A + +D L+ G+ T + VV Sbjct: 261 VVTVTGVIALGSAPLVKHASVWRPELMALTLFRDALRAQGVKV--TSMTAAPTPAGAAVV 318 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A + L +L++ LK SDN+ A+++ +++G PG+ +GS AVR L +Q G+ Sbjct: 319 A-RVPRRLEELVRFALKTSDNVTAESLLKLMGLQASGQPGSGESGSAAVRGYLERQ-GIP 376 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN--FISMLPLAGYDGSLQYRAGL 405 N ++ADGSGLSR+NL + TM ++LQ I D EL F LP+AG DG+L+ R + Sbjct: 377 TENLVLADGSGLSRYNLSSAETMTRLLQAI-HLDPELYRIFQQSLPVAGKDGTLKGR--M 433 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 + +G + KTG++ GV L+G++++A G+ +AF + YA Sbjct: 434 KGSCAEGNLRGKTGNMSGVSALSGYLSSAEGEPLAFSIIIQNYA 477 >UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Microcystis aeruginosa RepID=B0JUK1_MICAN Length = 474 Score = 139 bits (349), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 117/417 (28%), Positives = 202/417 (48%), Gaps = 43/417 (10%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 GA ++V+ + + H PAST K++T AA + D+R T + +GN Sbjct: 62 GAYWGILVKSLNSQENLYSLHENNFFTPASTAKLLTTAAAFSKFNRDYRLKTPILAQGNP 121 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 + + LV R D T+ + + LK G+N I +L+ S F D W Sbjct: 122 PD-LETLTLVGR--GDATITTEKLEKFAEKLKAQGINSI-YRLLVVASPFVVSDSQKTWE 177 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK----PGDMAFIRVASYYPVTMFSQVRTLP 208 W D+ ++ P ++ +++ N SV+L P+ D+ + + + +Q T Sbjct: 178 WEDVFFDYAVPASSLVLNEN--SVTLKLLPRQLGQSLDLQWSDPIAAKQWLIENQTSTAA 235 Query: 209 RGSAEAQYCELDVVPGDL--NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 +GS + G+L NR +TG L S+ A+ + Y A ++ L++A Sbjct: 236 QGSPNTL-----AIKGNLANNRLIITGSLAIDSQD-DFNLAIPQPSEYFLARWRNILEKA 289 Query: 267 GITWSGTLLRQTQVNEP--GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 GIT ++ +++ G + + +S PL L++ + K SDN++A+T+ +M+G Sbjct: 290 GIT-----VKNAEISSQILGHEITNLESEPLAYLVEKVNKNSDNLLAETLLQMLG----- 339 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 G +++ L + G+D + I DGSGLSR NLI P T+ Q+LQ +A++ Sbjct: 340 -------GVSGLQETL-TKLGIDSDSYKIGDGSGLSRQNLIKPKTLGQILQLMAENP--- 388 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 ++ L + G DG+L R Q ++G++ AKTG+L GV LAG++ TA Q + F Sbjct: 389 DYRRSLAIGGVDGTLTNR--FRQTPLEGRLQAKTGTLTGVIALAGYLATADNQPLIF 443 >UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELS3_OCEIH Length = 508 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 109/401 (27%), Positives = 197/401 (49%), Gaps = 19/401 (4%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS KV+TA++AL LGPD RFTT + T G + VL GD+ + DPTL + D+ Sbjct: 92 PASNMKVLTAVSALETLGPDHRFTTEVLTDGKIRGKVLHGDVYVKGKGDPTLLQSDLEAF 151 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV---DRNCFSV 176 LKK G+++I G+++ D + + + W+D F+ +A+ D + + Sbjct: 152 AKELKKQGIHKIKGDLVGDDTWYDDVRLSQDLNWSD-EPFFTGAQVSALTMSPDDDYDAG 210 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQV--RTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 ++ +P + + P + + +T + E + ++ G+ N + G Sbjct: 211 TVIVEVRPSENGKKAEVTLTPENNYISIENKTKMVANGEEKDISIERQHGN-NTIVIEGE 269 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSA 293 +P+ +V + +Y ++ + L++ GIT+ G + R + + +K+S Sbjct: 270 MPKDGSLSRSWASVWEPTNYVISVFRQTLEEEGITFIGKSKDRFEETPSSAEIRVAKESM 329 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL +LL +K S+N +T+ + +G + G+W G + +L + G+++ ++ Sbjct: 330 PLKELLIPFMKLSNNGHGETLVKEMGKVVED-DGSWDEGLVVMEDVL-GELGLNMDTILL 387 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGY-----DGSLQYRAGLHQ 407 DGSG+S N I PA + L Y+ Q +F S LPLAG+ G+L+ R + Sbjct: 388 RDGSGMSHKNFI-PAVELSELLYVIQEKEWFPSFQSALPLAGHPERMVGGTLRNR--MTN 444 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 + AKTGS+ GV L+G++TTA G+ + F ++ Y Sbjct: 445 SPATENAMAKTGSITGVSTLSGYVTTADGKEVVFSILINNY 485 >UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C8_PSEFS Length = 514 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 126/436 (28%), Positives = 200/436 (45%), Gaps = 39/436 (8%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 GA ++LMV+ + + ++ + +PAS K++T AA+ LGP +RF+T L G Sbjct: 75 GATVSLMVRDARSGSTLYQHNPRTRVIPASNLKLLTTAAAMDVLGPQYRFSTQLLGNGTQ 134 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 + L G+L R DPT + D + + A L GV Q+ G+++ D + F + W Sbjct: 135 QGERLSGNLYLRGLGDPTTQFADYQALAAQLAGQGVRQVQGDLVFDDTWFDAERLGVDWA 194 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSA 212 +D + + A +A V N D + V + PV + V + S Sbjct: 195 QDDESTYYGAQISALTVSPNA----------DFDAGTLLVTAKAPVAVGQPVSVVVSPST 244 Query: 213 EAQYCELD----VVPGD---------LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + Y +L+ PG+ N LTG L + +V + + Sbjct: 245 D--YVQLNNRAVSGPGNTYGITRQHGTNLLQLTGALAPGKQSRQW-VSVWEPTQLVANLF 301 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGT--VVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 + L Q GI G R P T V+A QSAPL +L+ +LK S+N +++ + + Sbjct: 302 EQALAQQGIQVLGR--RVIGGTSPATARVLAEHQSAPLQELITPLLKLSNNNMSEALLKA 359 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 +G N GT +AG AV +R+Q G+D DGSGLSR N ++ + +L Sbjct: 360 MGRKTANA-GTAQAGVAAVADFMRRQ-GLDPMTLSQVDGSGLSRRNWVSSQNLTDLLLAA 417 Query: 378 AQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 A+ + + LP+AG GSL+YR L + AKTGS+ GV +L+G+IT Sbjct: 418 AKQPWFEAWYNALPIAGDPDRMTGGSLRYR--LRGTAAQNNLHAKTGSMAGVSSLSGYIT 475 Query: 433 TASGQRMAFVQYLSGY 448 A G+R+ F + Y Sbjct: 476 DADGRRLVFSMISNNY 491 >UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax=Bacillus RepID=DACC_BACSU Length = 491 Score = 137 bits (344), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 124/442 (28%), Positives = 208/442 (47%), Gaps = 22/442 (4%) Query: 20 AANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 + +D+ + PA GA + V+ A ++ PAS+ K++TA AAL LG Sbjct: 37 SGQIDKILADHPALEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKLLTAAAALSVLG 96 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 ++ FTT + T G ++ L G+L + DPTL D M LK SGV I GN++ Sbjct: 97 ENYSFTTEVRTDGTLKGKKLNGNLYLKGKGDPTLLPSDFDKMAEILKHSGVKVIKGNLIG 156 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV----DRNCFSVSLYSAP--KPGDMAFIR 191 D + +P PW+D + AP +A D + +V + P K G+ + Sbjct: 157 DDTWHDDMRLSPDMPWSDEYTYYGAPISALTASPNEDYDAGTVIVEVTPNQKEGEEPAVS 216 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVV-PGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 V+ P T + ++ + +A +L + N T+ G +P + +V + Sbjct: 217 VS---PKTDYITIKNDAKTTAAGSEKDLTIEREHGTNTITIEGSVPVDANKTKEWISVWE 273 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 A YA + K LK+ GIT G ++ + V+ S +S PL L +K S+N Sbjct: 274 PAGYALDLFKQSLKKQGITVKGD-IKTGEAPSSSDVLLSHRSMPLSKLFVPFMKLSNNGH 332 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + + +G + G+W G + + L + GVD + ++ DGSG+S + ++ + Sbjct: 333 AEVLVKEMGKVKKG-EGSWEKGLEVLNSTL-PEFGVDSKSLVLRDGSGISHIDAVSSDQL 390 Query: 371 MQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 Q+L I +++ LP+AG G+L+ R + GKV AKTGSL V Sbjct: 391 SQLLYDIQDQSWFSAYLNSLPVAGNPDRMVGGTLRNR--MKGTPAQGKVRAKTGSLSTVS 448 Query: 426 NLAGFITTASGQRMAFVQYLSG 447 +L+G+ T SG+++ F L+G Sbjct: 449 SLSGYAETKSGKKLVFSILLNG 470 >UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMJ1_THIDA Length = 488 Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 121/429 (28%), Positives = 199/429 (46%), Gaps = 41/429 (9%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 +A++VQK+ A P + ++++ PAS K++T+ AAL QLGP +R+TT L G V +G Sbjct: 55 VAVVVQKLDAEQPLLSHNAEAALNPASVMKLVTSFAALDQLGPGYRWTTELWLDGPVAHG 114 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 VL GDLV + DPTL + + + L+ GV+Q+ G +++DT F + PG + Sbjct: 115 VLGGDLVVKGRGDPTLTLERMWLLQRALRARGVSQVRGRLVLDTGYFVLPELDPGAFDGE 174 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKP-GDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 ++A P + + N +V L +P G+ + P S L + Sbjct: 175 PLALYNALPGPLVANFNAITVHL----RPNGETVRVVPDVALPGVDLSSELVLSDEAGCD 230 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI----LKDELKQAGIT- 269 + + G RFT+ G A+ G YA A L L + T Sbjct: 231 GWSD-----GIEPRFTVEG-----------GRALVFGGRYAAACGERSLSLNLFEPATTF 274 Query: 270 -------WSGTLLRQTQVNEPGTVVASK-----QSAPLHDLLKIMLKKSDNMIADTVFRM 317 W+ + R G V AS S PL + L + K S+N++ +F Sbjct: 275 DFMFRGLWAESGGRIDGATVFGAVPASAPALRFASEPLTEALVRLNKYSNNLMTRNLFLT 334 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 +G + P T +DAVR L ++ G+ +I +G+GLSR ++ A + Q+L+ Sbjct: 335 LGAEAYGPPATPEKAADAVRASLTRR-GISTRKLVIENGAGLSRIERLSAAALTQLLRAA 393 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + F S LP+ DG+L+ R + + + G KTG+L+ V LAG++ G+ Sbjct: 394 YRSPLFAEFESALPIVAIDGTLKRR--FNGSPLAGNAHLKTGTLRDVSALAGYVVDVRGE 451 Query: 438 RMAFVQYLS 446 R +FV ++ Sbjct: 452 RWSFVMLVN 460 >UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=20 Tax=Bacteroides RepID=D2EX46_9BACE Length = 479 Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 120/439 (27%), Positives = 210/439 (47%), Gaps = 32/439 (7%) Query: 20 AANVDEYIT-QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 +A +D I +LPAG+N+A+ V + A P Y + +++ PAST K++T + AL + Sbjct: 30 SARIDALIEHKLPAGSNVAISVYDLTAGKPLYGYQADKLSRPASTMKLLTTITALSRPEA 89 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLID 138 D F T + +G +E L+GD+ G DP + + ++VAT+ + + I G V D Sbjct: 90 DEPFRTEVWYQGTIERDTLQGDMYVIGGYDPEFDEEALDSLVATVARFPFSVIKGKVYGD 149 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV---ASY 195 S+ S GW W+D F + ++++ V+ + GD A + +SY Sbjct: 150 VSMKDSLYWGSGWLWDDTPYSFQPYLSPLMLNKGVVKVTATPGER-GDSARLECTPASSY 208 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 Y +T +Q RT G L V G N T+TG + R F+ QD + Sbjct: 209 YTLTNKTQSRTPSAGRFRVSRDWL--VNG--NNITVTGNVDARRAGTVNIFSSQD---FF 261 Query: 256 GAILKDELKQAGITW-------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 + L+ GI L + + + +AS +++ + D++K ++K+SDN Sbjct: 262 MHTFMERLQARGIRCIPAVDAEVSYLFGEFRQDSLSVRMASYETS-VQDVVKQIMKESDN 320 Query: 309 MIADTVFRMIGHARFNVPGTWRA----GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 + A+ + +G G R G A+R ++++ G + +ADG GLS +N Sbjct: 321 LNAEAMLCRLG---VQSSGKKRVSAEDGLSAIRMLIKEM-GYNPDRYNLADGCGLSNYNY 376 Query: 365 IAPATMMQVLQY-IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK-VSAKTGSLQ 422 I+P ++ L+Y ++ D LP+ G DG+L++R + + + + V AKTGS Sbjct: 377 ISPELLVSFLRYAYSRTDVFQKLYKALPIGGVDGTLEFR--MKKGTLSHRNVHAKTGSFT 434 Query: 423 GVYNLAGFITTASGQRMAF 441 + LAG++ +G +AF Sbjct: 435 AINCLAGYLKARNGHEIAF 453 >UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Rhodocyclaceae RepID=A1KBR6_AZOSB Length = 488 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 124/424 (29%), Positives = 205/424 (48%), Gaps = 20/424 (4%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 ++PA A ++ VQ V S PA+ +++ + PAST K++TA AA QLGP + + T + Sbjct: 57 RIPAEA-VSAWVQPVDGSPPALAHNAARPMNPASTMKLVTAFAAFSQLGPAYTWHTRVAR 115 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA--SHD 146 G V NG L+G+L GADP L +R ++ ++ GV I G +++D S A HD Sbjct: 116 AGEVRNGRLEGELFLIGGADPMLDEDRVRRLLRKVRGLGVQHIAGGIVLDASALALPPHD 175 Query: 147 KA--PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV 204 A G P + +++ P ++ N ++L+ A G + V + P+ + Sbjct: 176 PALFDGRP----LRPYNSGPYGLLMHYNTLQLALFPAEAGGP---VTVVAEPPLAGLALE 228 Query: 205 RTLPRGSAEAQYCE--LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 L GS + + L+ L+G LP + A ++YA A++ Sbjct: 229 NRLVGGSGACEPWQRGLEAALSPAGGLILSGSLPVACGVRNWSAAPLAPSAYAAALVGAV 288 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 + G T +G +R+ T++ ++S PL D+++ M K S N+IA + +G Sbjct: 289 WGELGGT-AGNAVREAVTPGSATILLDEESRPLADVIRDMNKWSSNVIARQLLATLG--- 344 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 N PG A Q AG+D +I +G+GLSR + T+ L Q Sbjct: 345 MNQPGDAVQAGAAAAQRALAAAGIDTSGLVIENGAGLSRLERVRADTLAATLLAAWQRPW 404 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 +I+ LP+AG DG+ + R L+ + +G KTG+L+GV +AG++T A GQR V Sbjct: 405 MPEYIAALPVAGVDGTARRR--LNGSPANGYAHLKTGTLEGVRAMAGYVTDARGQRHIVV 462 Query: 443 QYLS 446 ++ Sbjct: 463 MMVN 466 >UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X959_METSD Length = 480 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 120/426 (28%), Positives = 197/426 (46%), Gaps = 21/426 (4%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A ++A+ Q++ P I + + PAST K++T AAL LGP +R+ T + G Sbjct: 34 ADDDVAVYAQRLDLPLPVIAHRADAALNPASTMKLLTTYAALDMLGPAYRWRTEIYRDGP 93 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + +GVL+G+L+ R DP L +D ++ L++ GV I G+++ID S FA + Sbjct: 94 LVDGVLQGNLILRGEGDPALMAEDFWRLLGRLRQLGVRDITGDLIIDNSYFAPQAQDAAA 153 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSL-YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 D + ++ +A +++ S+ L SA P + + P + + R Sbjct: 154 FDGDGYRAYNVTASALVINLQASSLRLAVSADSPARVE-VSAEPALPGVVVQNRLQVTRD 212 Query: 211 S-----AEAQY-CELDVVPGDLN------RFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 S + QY + V P N TL+G L +V DG Y + Sbjct: 213 SCGDWRSRLQYKVQPKVEPQAANDPVRGVSITLSGTFSADCGEKYLELSVLDGPQYTYQL 272 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA--PLHDLLKIMLKKSDNMIADTVFR 316 + + G + G + + Q P V + Q + PL D+L+ + K S+N++A + Sbjct: 273 FQSLWQSLGGSLHGEV--RLQALPPQAVKLTDQLSPLPLADVLRRLNKYSNNLMARQLLL 330 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 + + N+P T AG++AVRQ L ++ G +I +G+GLSR I+P + +L Sbjct: 331 TVAAQQGNLPATEEAGANAVRQWLVKK-GYRFPELMIENGAGLSRVERISPRHLGNILAD 389 Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 +S LP+ G DG+L R + V G+ KTGSL GV LAG++ G Sbjct: 390 AYAGPWMPELMSSLPVLGVDGTLLKR--MQGQPVQGRAHLKTGSLNGVSTLAGYVLDQHG 447 Query: 437 QRMAFV 442 Q V Sbjct: 448 QPWLLV 453 >UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Geobacter RepID=B5ECV6_GEOBB Length = 495 Score = 135 bits (340), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 25/403 (6%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 +++ + + +PASTQKV TA+AAL LGPD TT+ LKG D Sbjct: 88 EFNPRLLLVPASTQKVFTAVAALSILGPDREVATTVALDAAGARIYLKG------CGDSL 141 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 L D+ + A + + D S F + GW W+D S P + V+ Sbjct: 142 LSAADLATLAAAAASKLDKGREYTLAADLSCFDDLYRGMGWMWDDDEMMIS--PLS--VN 197 Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR-GSAEAQYC-ELDVVPGDL-N 227 N S+ + K G A V + P T + V+ L R GSA+ + + PG+ N Sbjct: 198 HNAVSLLVKPGAKAGAPA---VVTAEPRTSYYTVQNLTRTGSAKDESSIQASRRPGERDN 254 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 T+TG + S P +V A + +D L+ G+ T + T V Sbjct: 255 VVTVTGVIALGSAPQVKQASVWRPELMALTLFRDALRAQGVKV--TDMTTATTPAGATEV 312 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A + S L ++++ LK SDN+ A+++ +++G G+ AGS VR+ L +Q G+ Sbjct: 313 A-RSSHSLEEMVRFALKTSDNVTAESLLKLLGLHGSGKRGSAEAGSAVVRRYLERQ-GIA 370 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN--FISMLPLAGYDGSLQYRAGL 405 N ++ADGSGLSR+NL + TM+QVL+ I Q D L F LP+AG DG+L+ R + Sbjct: 371 TDNVVVADGSGLSRYNLSSADTMIQVLRAI-QRDPGLYRIFQESLPIAGIDGTLKNR--M 427 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 + +G V KTG+++GV LAG+ T+A G+ AF + Y Sbjct: 428 KGSCAEGNVRGKTGNMKGVSALAGYATSADGEPFAFSIIIQNY 470 >UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q2Y6_9ACTO Length = 528 Score = 134 bits (337), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 121/435 (27%), Positives = 194/435 (44%), Gaps = 25/435 (5%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G+ + L+V+ D + LPAS K+ ++ AA+ LG D+RF T + V Sbjct: 60 GSQVGLLVRDATTGETLYDRNGGTRLLPASNTKLFSSAAAMETLGADYRFHTDVLATAPV 119 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 +G L+GDL + DPT D + + +SGV +IDG+++ D + F W Sbjct: 120 RDGKLRGDLYLKGYGDPTSLESDYVALAKQVAQSGVRRIDGDLVADDTYFDHVRLGDSWA 179 Query: 153 WNDMTQCFSAPPAAAIV----DRNCFSVSLYSAP-----KPGDMAFIRVASYYPVTMFSQ 203 W+D ++A +A + D + + + S P P D+ + S + + S Sbjct: 180 WDDEPFYYAAQISALTLAPNADYDSGTAIVESRPGSTVGAPVDLKLVPATSV--LKLVST 237 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 T GSA E D N +TG +P S V + YA + + L Sbjct: 238 ATTGAAGSANTLSIERD---HGTNIVRVTGSVPAGSSVGTEWVTVWEPQVYAADVFRRAL 294 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 G+ G + +A +S + L+ +K S+NM A+T+ + +G A Sbjct: 295 AAQGVRVDGRIKVAATPAAGTRRLARDESMTVGQLMNPFMKLSNNMHAETLVKAMG-AVA 353 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+W AG V Q + GVD G ++DGSGLSR + P ++ +L + + Sbjct: 354 AANGSWPAGLGVVTQYAK-SVGVDTGTIRLSDGSGLSRKVNVTPKSVTDLLVAVQKEPWF 412 Query: 384 LNFISMLPLAG-----YDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + LP+AG G+L+ R AG A V AKTGSL GV L+G+++T G+ Sbjct: 413 QQWYDALPIAGNPDRFTGGTLRNRMAGTPAA---NNVHAKTGSLTGVTALSGYVSTKDGR 469 Query: 438 RMAFVQYLSGYAVEP 452 ++ F + Y V P Sbjct: 470 KLVFSMISNNYLVSP 484 >UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7A0_SULNB Length = 577 Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 112/426 (26%), Positives = 194/426 (45%), Gaps = 21/426 (4%) Query: 26 YITQLPAGAN------------LALMVQKVGASAPAI-DYHSQQMALPASTQKVITALAA 72 YI LPAG N +++ +++ G S + ++ + PAS KV++ AA Sbjct: 14 YIHALPAGINQIIGKSGIPKKDISIYIKEAGNSNRVVASLNADKSRTPASVVKVLSTYAA 73 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 +++LG D+R+ T + G ++NGVL GDL+ + DPTL +D+ +VA +K G+ QI Sbjct: 74 VLKLGFDYRWPTKFYSTGKIKNGVLYGDLLIKGFGDPTLSDKDLPEIVAKIKAKGIRQIT 133 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF-IR 191 GN++ID S F K ++A P A + + ++ + PK + Sbjct: 134 GNIVIDRSYFKVGTKDNSGFDQHTYSPYNAMPDAMMFNERISTICV--TPKKNVVTKQTP 191 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 ASY V V RG ++D + L G + + L + Sbjct: 192 DASYRVVNKLKPVNKPCRGRYSWPSFKVD-KKQNPTTVLLKGPISKHCGTRKLCQVITKP 250 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 LKD L+++G++ G R ++ + + S PL ++ KKS+N+ A Sbjct: 251 YKSFYYALKDALQKSGVSVKGG-FRLNKIPRDAKELFTHYSQPLEKIISKTAKKSNNLYA 309 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + +G + P T G AV IL+ + + G I +G GLSR + I + Sbjct: 310 RHIMLFLGAKMYGAPSTLSKGRQAVEYILKSRGALKSGPLHIDNGCGLSRSSRITAKILA 369 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 VL A + ++ L +AG DG+++ R V + KTG+L+ V N++G++ Sbjct: 370 GVLD-DAYTRYGMRWMKTLSIAGVDGTIKRR--FRGTIVRNRAWMKTGTLKRVKNISGYV 426 Query: 432 TTASGQ 437 + +G+ Sbjct: 427 KSRNGR 432 >UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYI7_9SPHI Length = 515 Score = 134 bits (336), Expect = 9e-30, Method: Compositional matrix adjust. Identities = 115/439 (26%), Positives = 199/439 (45%), Gaps = 30/439 (6%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 AL VQ V + + + Q AS+ K +T A L LG +++F T ++ G + GV Sbjct: 73 ALSVQDVTSGRQLVQVNPYQTMTVASSLKTVTTSAGLGILGSNYKFATQIQYDGALNGGV 132 Query: 97 LKGDLVARFGADPTLKR--------QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 + G++ + G DPTL + + +A +KK+G+ +I G ++ID ++F + Sbjct: 133 INGNVYIKGGGDPTLGSPLLGYSLDRTMNEWIAAMKKAGIRRIKGQLIIDETLFEENVTP 192 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVASYYPVTMF-SQVRT 206 W W DM ++AP A V N + + L A + +R + + P F + ++T Sbjct: 193 SSWIWADMGNYYAAPAGAINVLDNTYKLYLQPANRLNTTPKVLRTSPWVPRIQFVNHLKT 252 Query: 207 LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 G+ + Y + P D R+ + G +P S + A+ D Y G + +L Q Sbjct: 253 AAAGTGDQAY--IHGAPYDHVRY-INGTIPMGST-FSIKGALPDPGFYLGIAFRKKLIQN 308 Query: 267 GI--------TWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 G+ T L + ++N T+V + +S L L+K + S N+ A+ V + I Sbjct: 309 GLMTNKNKATTTRMMKLDKQRINYRRTLVYTHRSTTLKSLVKWINLYSINLYAEAVLKAI 368 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 G + G+ AG+ A+ Q + + G+ I DGSGL++ N I + QV + A Sbjct: 369 G-IKQQAEGSTAAGAKAITQYWKAK-GLSTSGLYIEDGSGLAQSNGITAYQLAQVQRLTA 426 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + ++ LP+AG G++ R + AKTG + V + G+ +GQ Sbjct: 427 KQSYFNDYYQSLPVAGVSGTM--RGLCRGTRAQNNLRAKTGGMTRVISFTGYFKNRAGQL 484 Query: 439 MAFV----QYLSGYAVEPA 453 +F QY Y + A Sbjct: 485 RSFALVANQYTCKYNIIKA 503 >UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTM3_METML Length = 477 Score = 134 bits (336), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 115/431 (26%), Positives = 214/431 (49%), Gaps = 31/431 (7%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 +PA +++++ VQ V + P + +++ + PAS K++T AAL L P +R+ T L Sbjct: 34 VPA-SDVSIYVQAVDSRVPILSHYADKSMNPASVMKMVTTNAALDLLTPAYRWKTELYQD 92 Query: 90 GNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 G +++GVL G+L+ + DP+ K QD ++ +LK++GV +I+G++LID S FA D Sbjct: 93 GLIKDGVLNGNLIIKGYGDPSFKVQDFWRLLMSLKQAGVEKINGDLLIDKSYFAD-DVDN 151 Query: 150 GWPWNDMT-QCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 G ++D + ++A P+A V+ S + A + G + V + + + V + Sbjct: 152 GVSFDDEKWRAYNAKPSAFSVNGRSTSFR-FLANEIG----VSVNQEFELPEVAIVNHMK 206 Query: 209 RGSAEA----QYCELDVVP------GDLNR-----FTLTGCLPQRSEPLPLAFAVQDGAS 253 R + D+ P G N+ + G + ++ D Sbjct: 207 RVDGDCGNWRGRMSYDIQPYGSQSVGTQNKAAKAVVSFKGIYAADCGERYIELSLFDDTQ 266 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 YA K ++ G ++ G L Q V + + S PL +++ + K S+N++A Sbjct: 267 YAFFTFKKLWRELGGSFDGKLKLQP-VPANAKKLLEQASEPLGTVVRDINKWSNNLMARQ 325 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM--M 371 + +G + P T + G+ A++ L G+ +I +GSGLSR I+ + M Sbjct: 326 LLLTLGAEKSGAPATMQKGAAAIQDWLSTN-GLSFKGLVIENGSGLSRVERISAEHLGKM 384 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 V Y++ E +++ +P+ DG++++R L ++ V+G+ KTGS+ GV ++AG++ Sbjct: 385 LVRAYLSPVMPE--YMASMPILSLDGTVKHR--LEESAVNGRAHLKTGSINGVSSIAGYV 440 Query: 432 TTASGQRMAFV 442 +ASG R V Sbjct: 441 LSASGHRYVMV 451 >UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fusobacterium RepID=C3WBP8_FUSMR Length = 555 Score = 133 bits (335), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 103/421 (24%), Positives = 196/421 (46%), Gaps = 36/421 (8%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 +N+ + V+++ + Y+ PAS KVIT+ AL LG D R T + G ++ Sbjct: 132 SNIGIEVREIESGEIIAQYNKGVAITPASIMKVITSATALEVLGADTRLETKVVYDGKID 191 Query: 94 N-GVLKGDLVARFGADPTLKRQDIR--------NMVATLKKSGVNQIDGNVLIDTSIFAS 144 + G L GD+ G DPTL I+ ++ +K SG+ +I G++++ ++F Sbjct: 192 SEGTLTGDIYIIGGGDPTLGSDGIKKEQTAFITEWISKVKSSGIKKIKGDIIVIDNLFGY 251 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV 204 W W D + V N +++ L S K D+ + + +++ Sbjct: 252 VGVEEKWLWEDFGTNYGQGTYGISVFDNLYTLYLSSTDKKIDILGTK-PEIDGLKFENRL 310 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 + PRG + L P + N+ L G +P + + + + A + G K LK Sbjct: 311 KISPRGRRDFSVRGL---PFE-NKRVLNGEVPANLKKIVTKSDIPNPALFLGQYFKKNLK 366 Query: 265 QAGITWSGTLLRQTQVNE----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 +G++ SG + N+ P T+ +K SA + ++++++LK+SDN + +++++ Sbjct: 367 NSGVSVSGDIKTSRNSNKRPKNPKTLAITK-SATIEEMVRVLLKRSDNHYTEHLYQLLKL 425 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 + W+ + G+D ++ DGSGLSR + ++ + + +L Y+ + Sbjct: 426 KDVKISEFWK------------EKGIDTKALVMLDGSGLSRGDYVSASILTDILAYM--N 471 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 +N F +LP GY+G++ L DG V K+GS+ G+ + G+I G ++A Sbjct: 472 ENYPEFEKLLPRGGYEGTVS--DFLEPKVFDGIVRVKSGSMSGIQSYTGYI-EKDGTKLA 528 Query: 441 F 441 F Sbjct: 529 F 529 >UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY12_CHLT3 Length = 521 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 212/466 (45%), Gaps = 51/466 (10%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 ++T+ P + ++ + + + + +PAS QK++T AA L +FR++T Sbjct: 53 FLTRSPGNFFWGVRIESLEKNQMIYSLNDHKNFIPASNQKILTVAAAFNFLDTNFRYSTE 112 Query: 86 LETKGNVEN-----GVLKGDLVARFGADPTLKRQDIRN--------MVATLKKSGVNQID 132 + GN + G+ GD++ + +P + + + +LK+ G I Sbjct: 113 VYLSGNGNSNGNTQGIFDGDVIVKSNGNPCIASHWLEARPTIFFQWLADSLKRMGYAVIK 172 Query: 133 GNVLIDTSIFASHDKA----------PG-WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 G+ + D S F D PG W W DM ++P +A + N V+ Y Sbjct: 173 GDFIGDDSAFLISDMGRDFRGGDGDYPGSWEWGDMLFAMASPASAISFNENMVRVTAYPG 232 Query: 182 PKPGDMAFIRV---ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP-- 236 K GD + +++ P+T +Q T G A +Q N + G +P Sbjct: 233 AKVGDKPIVETTVESAFLPIT--NQAVT---GEANSQKTIRITRELGTNHVLIVGNIPIG 287 Query: 237 --QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT-----VVAS 289 + SEP+ AV+ + ++++ ++ GI +G LLR+ + PG+ ++ Sbjct: 288 RWRESEPI----AVEQPTLFFLTVMRETFEKKGILHAG-LLRRAEGVWPGSGDSLRLLYR 342 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 +S L +L+ + K+S+N A V R +G + N + AG A+ +I + G+ Sbjct: 343 YESPRLIRILEYINKESNNFAAGQVLRTLGKSVVN-EASHEAGLQAI-EIYLESLGITEV 400 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 + + DGSGLSR NLI+P +++VL+++ Q F++ L +AG DG+L R L Sbjct: 401 SYRLKDGSGLSRQNLISPEALVKVLKHVYQSKYFGAFLNTLSVAGVDGTLSRR--LVGTN 458 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 + +V KTG L V G++ A G+ + V +S +P Q Sbjct: 459 AETRVFGKTGFLSSVRTFIGYVQAADGEWLG-VSLMSMNYTQPTRQ 503 >UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Anaeromyxobacter RepID=A7HHA8_ANADF Length = 758 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 107/396 (27%), Positives = 193/396 (48%), Gaps = 18/396 (4%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K++T+ AAL +LGP +RF+T L L R DPTL + + + Sbjct: 101 PASNVKLVTSAAALARLGPGYRFSTELLVDPASARAASVRTLYVRGRGDPTLVTERLWAV 160 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 L G+ +I G V++D F PG+ + + + AP A + N +V++Y Sbjct: 161 SGELVHQGIRRI-GEVVLDDGFFDGERIGPGYDQEEGDRSYLAPTGA--LSLNWNTVAVY 217 Query: 180 SAP-----KPGDMAFIRVASYYPVTMFSQVRTL-PRGSAEAQYCELDVVPGDLNRFTLTG 233 AP + G + ++Y+ V ++ RT+ PRG E +V G R ++G Sbjct: 218 VAPGDRRGQKGRVELEPQSAYFEV--VNRTRTVGPRGRRHVT-VESSLVNGK-QRIVVSG 273 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 +P S + + D Y G L L+ G+ +G +R V +V +S Sbjct: 274 PVPAGSRVQAVWRKIDDPPRYLGHTLAKLLELRGVKVTGA-IRVGTVPPGAKLVHVAESE 332 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 L ++++ + K S+N +A+ + + +G PG+W G +A + L GV G ++ Sbjct: 333 TLAEIVRRLNKSSNNFVAEQLLKTLGAEAKGAPGSWSKGVEAAGEFL-ASIGVSRGAYVM 391 Query: 354 ADGSGLSRHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 +GSGL+ N + ++ +L+ + ++ + +++ LP+AG DG+ ++R + DG Sbjct: 392 KNGSGLNDANRFSARQLVTLLRAMWSRFPLQAEYVTSLPVAGRDGTTRWR--MDGTAADG 449 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 + AKTG+L V +L+G++ TA + +AF ++ Y Sbjct: 450 HLRAKTGTLDNVTSLSGYVETAGKRTLAFAILVNDY 485 >UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VD0_CYTH3 Length = 483 Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 122/460 (26%), Positives = 207/460 (45%), Gaps = 46/460 (10%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A + + ++ + A+ + ++QQ PAS K++T AAL LG D+RF T + GN+E Sbjct: 44 AQVGISIRDITANTLVFEKNAQQAFTPASNLKIVTTAAALELLGSDYRFVTKVLYTGNIE 103 Query: 94 NGVLKGDLVARFGADPTLKRQD----------IRNMVATLKKSGVNQIDGNVLIDTSIFA 143 G G L + DPTL +RN V LK G+ GN++ID + F Sbjct: 104 AGNFSGTLYVKGSGDPTLGSDKMTAAGSYQTLVRNWVTALKNKGITAFTGNLVIDPTHFG 163 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM--AFIRVASYYP---- 197 + + W D+ + A ++ N +++ KPG + + S P Sbjct: 164 YNAIPNDYTWGDIGNYYGAGSYGLNINENQNVIAI----KPGTSLGSITTILSITPKDTS 219 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT-LTGCLPQRSEPLPLAFAVQDGASYAG 256 + V+T GS + V N F + G +P S + ++ D A G Sbjct: 220 CVYVNHVKTGAAGSGDQSI----VYSSPYNPFVYIEGTVPAGST-YNVKASISDPARLLG 274 Query: 257 AILKDELKQAGITWSGTLLRQTQVNE-PGT---VVASKQSAP-LHDLLKIMLKKSDNMIA 311 +L E+ GI W G + TQ + P T + +Q +P L ++ S+N+ A Sbjct: 275 QLLTKEMAVQGIQWKGEMRVLTQDDTIPDTTNWITLLEQRSPRLKEIAVYTNLVSNNLYA 334 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + + + I + + G+ G+ AV++ L+ + GVD ++ DGSG+S N I+P Sbjct: 335 ECLLKEIAFNKTGI-GSTELGAAAVKKYLK-KIGVDTSGLVLRDGSGMSPFNSISPN--- 389 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 Q+ +A+ F+ LP AG +G++ + ++G GK+ K+G++ G +G++ Sbjct: 390 QLTSLLAKQQANTVFVGCLPTAGKEGTVAHIC--KESG--GKIRVKSGTMNGTTCYSGYV 445 Query: 432 TTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 T ASG+ Y V + +NR I V E L K Sbjct: 446 TAASGKV-----YAVSLMVNKHEAKNRTIQRV-LEKVLLK 479 >UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K701_CYAP7 Length = 475 Score = 130 bits (328), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 111/391 (28%), Positives = 192/391 (49%), Gaps = 22/391 (5%) Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 Q +PAS K++T AAL LG DFR T++ G E +L V G DP+L + Sbjct: 71 QYFVPASNTKLLTTAAALRVLGADFRVRTSVYGVG--EPPILASLRVVGRG-DPSLTNKQ 127 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 ++ + LK+ GV QI +++D S F P W W+D+ ++ + I++ N Sbjct: 128 LKLLAQQLKEKGVQQI-SELIVDDSYFKELPLNPSWEWSDLLFYYTPSVNSLILNENTSL 186 Query: 176 VSLYSAPK----PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 + + P+ P + + +++ V T +GS + D + + Sbjct: 187 IKI--VPQGLNYPAKLVWSDAIVARQWRVYNDVITTRQGSRKTIDFYRDF---EQPIIYI 241 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASK 290 TG LP E A AV D ASY + L + GI + T+++++ + G +A Sbjct: 242 TGQLPVDDEGYTTAIAVADPASYFLESFRSILLEEGIKVNRATIIKESSRFDLGEELAFV 301 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +S PL +L+ + +S+N+ A+ + R++G N + G + +++ L G++ + Sbjct: 302 ESPPLGNLIDKINGESNNLFAEAILRILGSESRN-----QMGVEVIKENLID-LGIEEDS 355 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 +ADGSGLSR NL+ P T++QVL+ +AQ + + + L +AG G+LQ R Sbjct: 356 FSLADGSGLSRQNLVTPETLVQVLRLMAQSPDAEIYQNSLAVAGEKGTLQRR--FLDTDF 413 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G + KTG+L GV L+G++ + Q + F Sbjct: 414 VGNLQGKTGTLTGVSALSGYLFVPNYQPLVF 444 >UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7B3_9GAMM Length = 470 Score = 130 bits (328), Expect = 8e-29, Method: Compositional matrix adjust. Identities = 121/468 (25%), Positives = 214/468 (45%), Gaps = 49/468 (10%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGASAPAIDYHSQ 55 MR F+ L S QA + +T++ A ++++ VQ + A P +D + + Sbjct: 1 MRIGFFL--LCSWFCLLAQAQQLPAAVTEMLNKNKVAPEDVSIWVQGIEAEVPLVDLNGK 58 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-----NGVLKGDLVARFGADPT 110 Q+ PAS +KV+T + LI+LG DFR+ ETK V+ NGV+ G+L G DP Sbjct: 59 QLRHPASVEKVLTTASGLIRLGADFRW----ETKFYVDSLPDANGVVDGNLYVVGGGDPF 114 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF----ASHDKAP--GWPWNDMTQCFSAPP 164 L + + M+ L+++GV I G++++D S++ D A G PW ++A P Sbjct: 115 LVEEQLLAMLQGLQQAGVRHITGDIVLDDSLYHLSPQERDAAAFDGKPW----AAYNAVP 170 Query: 165 AAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG 224 +V N +V + P+ G V + +Q++ + + V+ Sbjct: 171 HPLMV--NFRTVKMQVTPQAGKPKLALVPEIVNWKIDNQLQVRKGNCSGDGFTPSAVLER 228 Query: 225 DLNRFTL--------TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR 276 D + + TGC Q + + + + + +D + G ++ G Sbjct: 229 DDKGYAVMHVAGTYATGCGAQ-----DVMLVLGEASEQFYYLFRDLWYRLGGSFDGA--- 280 Query: 277 QTQVNEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD 334 P T + + S PL ++ M ++S+N++ + +G F+ PG+ G + Sbjct: 281 GKVAKTPSTAKHIYTGLSEPLAVQIQRMNQESNNVMTRQLMLTLGAKTFDPPGSLEKGRN 340 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG 394 AVR L + G++ II +G+GLSR L + + Q+L+YI D F+ L +AG Sbjct: 341 AVRMTL-EAFGINTDGMIIDNGAGLSRLELTSAEQLAQLLRYIYLSDQGQTFLQSLAVAG 399 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 G+L+ R + G+V KTG++ V + AG++ SG+ V Sbjct: 400 ESGTLRKR--YRGEALAGRVIGKTGTIDNVRSFAGYVRAESGRNYVVV 445 >UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZN5_THIIN Length = 501 Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 121/415 (29%), Positives = 184/415 (44%), Gaps = 20/415 (4%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 + A ++Q + + +P I ++ + PAS K++T AAL LGP + + T + G + Sbjct: 72 SCAFVLQPLDSPSPQIAFNGAALMNPASVLKLVTTYAALRILGPAYVWKTPVYATGPIRA 131 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 GVL+GDL DP L ++ ++ L+ G+ +I G+VLID F PG Sbjct: 132 GVLQGDLAFVGSGDPHLMADNLWSIAVRLRDLGIRRIRGDVLIDRQAFDLPPHNPGAFDG 191 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D T ++ P +V+ + + +RV PV F +R P+ ++ A Sbjct: 192 DATAPYNVGPDPFLVNFGVLRLGFVPDAQGQQ---VRVTVEPPVAGFD-LREAPKLTSAA 247 Query: 215 QYCELDVVPGDLN-----RFT---LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 D + D RF C PQ +A V D A Y +L Q Sbjct: 248 CGNWKDKLRADWKQPFAPRFAGGFAAACGPQTWN---IAPEVSDNA-YVQRLLAALFAQV 303 Query: 267 GITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 GI W G +R + T + S L L++ + K S+N++A VF + Sbjct: 304 GIDWKGR-VRTANLPAGATELTVWDSPALAVLVRDINKYSNNVMAQQVFLTLALQAGAQR 362 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 TW AV Q L + + ++ +G GLSR I+ A + +L+ F Sbjct: 363 ATWGLAQQAVEQWLSTH-NLSMPGLVLDNGCGLSRIARISAADLNALLRSAWNSPVMPEF 421 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 IS LPLAG DG+L R G++ AKTGSL GV +LAG+ T +GQR F Sbjct: 422 ISSLPLAGEDGTL--RRHFRDPDTAGRIHAKTGSLDGVLSLAGYAQTRAGQRYTF 474 >UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3H6_9CYAN Length = 515 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 107/413 (25%), Positives = 197/413 (47%), Gaps = 17/413 (4%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A +++Q + + P + +PAS K+ T AAL QLG +FR T++ G Sbjct: 84 ARWGILIQPLFSDTPLYSRERDRYFIPASNLKLFTTAAALSQLGANFRIRTSV--YGTPT 141 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 G + V G DP+L ++++ L++ G+ ++D ++++ F+ P W W Sbjct: 142 EGTIPQLRVVGRG-DPSLNTDQLKDLAQQLRRQGIRRVD-QLIVEDRYFSEPKVNPTWEW 199 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLY--SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 +D+ + + I++ N ++L + +P + + + + +Q T Sbjct: 200 SDIQFYYGTAVNSLILNENAVLLTLTPQTVGQPLTVTWADPIAAKQWQIENQTVT----- 254 Query: 212 AEAQYCELDVVPGDLNR--FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 EA+ E + G L + + G L + A A+ D A+Y + L +GI Sbjct: 255 TEAEPTESINISGVLGKPLLRIRGQLAADAGLWLTAVAIPDPANYFLQHFRRALADSGIQ 314 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV-PGT 328 L+ + T +A+ S PL +L+ ++S+N+ A+ + R +G T Sbjct: 315 VERGLVTTEPNFQEDTELAAVDSPPLSELIAETNQQSNNLYAEALLRSLGVTDKEADEST 374 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 AG + +R L + GV+ + ++ADGSGLSRHNL++P ++Q LQ IA+ +++ Sbjct: 375 ATAGREQIRASL-AELGVEPESYVLADGSGLSRHNLVSPTAIVQTLQAIARTPMAQSYLD 433 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 L +AG +G+L+ R G+V AKTG++ GV L+G++ Q + F Sbjct: 434 SLAVAGVEGTLRQR--FQNTPAQGRVYAKTGTMTGVSALSGYVEVPDYQPLVF 484 >UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkholderiaceae RepID=Q3JVI2_BURP1 Length = 800 Score = 128 bits (322), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 14/422 (3%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 ++PA ++L+++V+++G PA+ +++ + PAST K++T A L LG D+R+ T+ Sbjct: 366 RVPA-SSLSVVVERIGDRTPAVAWNASRPMQPASTMKLVTTYAGLSLLGADYRWRTSAYA 424 Query: 89 KGNV-ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 G+V ENG L G L + DP L +++ ++V ++++G+ +DG +++D + FA + Sbjct: 425 DGDVDENGTLHGTLYIKGTGDPKLVPEELIDLVNKIRRAGIVNVDGALVLDKTFFAPQTR 484 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 +D + ++ P + S ++ P D I V + + L Sbjct: 485 DLPPLDDDASAPYNVGPDPLLYAFKALSFTV----TPTDSGAIAVDVVPALANLNVDNRL 540 Query: 208 PRGSAEAQYCELDVVP---GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 G +V G+L + G P P AV + +++ + Sbjct: 541 VEGQGSCDAARPTLVTDANGELT-ASFAGDYPPSCGPTTTNLAVLNHSTFFARGFLALWR 599 Query: 265 QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 Q G ++SGT+ + +V VAS L ++ + K S+N++A +F IG Sbjct: 600 QTGGSFSGTIA-EGKVPGRARPVASHHGPVLSSVVHDINKFSNNVMARNLFLTIGAVEHR 658 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 P T +D +R L +G+ + +GSGLSR ++ + +LQ Sbjct: 659 PPATPAQSADTIRAFL-AHSGLPTDGLALENGSGLSRDERVSALGLADMLQAANASPVAQ 717 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 F+ LP+AG DG+++ R L A V G KTG+L+ V +AG++ +A G V + Sbjct: 718 AFVDSLPIAGVDGTMRNR--LTNAPVGGNAHIKTGTLRDVRAIAGYVASADGSSYVVVSF 775 Query: 445 LS 446 ++ Sbjct: 776 IN 777 >UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisella RepID=Q0BKW3_FRATO Length = 464 Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 111/391 (28%), Positives = 185/391 (47%), Gaps = 35/391 (8%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 +PAS K++T +A L+ LG DFRF T L + N + +L F DP+ R+D+ Sbjct: 71 IPASNTKLLTGIAGLLFLGKDFRFETKL-YYDKINNQSI-DNLYIEFSGDPSFTREDLHK 128 Query: 119 MVATLKKSGVNQIDGNVLI-------DTSIFASHDKAP---GWPWNDMTQCFSAPPAAAI 168 ++ +L K + I + DT I S+ + G P + +A I Sbjct: 129 LLISLHKKNIKNIKNIYFVNRYFEGRDTPINQSNTSSIFGYGAPSSIYNLNENAITLQLI 188 Query: 169 VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR 228 N F VS K + I +AS Q++T C+ + D N Sbjct: 189 PQSNTFEVSQSVGEKINFINKIFIAS------VEQLKT----------CQFNAYYKD-NT 231 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA 288 L GCLP S +FA++D + EL Q I+ + ++ + T++A Sbjct: 232 LVLNGCLPSNS--YTFSFAIEDPQQQMQQAVLAELAQLKISLDTQIKTTNKLPDNLTLLA 289 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 +SA L LLK M SDN+ A T+ R IG+ +N G+ +G +A+ +IL+ + +D Sbjct: 290 KHKSADLTQLLKHMFVTSDNLYAQTITRTIGY-YYNQVGSIVSGKNAIIKILKTKLNLDT 348 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 + + DG+G+S +NL++ ++ +LQ I+Q+ N +LP+ G G+L+ R+ Sbjct: 349 DSIQLEDGAGMSENNLLSANFIVSLLQKISQNKNFELLKCLLPIYGETGTLKNRSS---K 405 Query: 409 GVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 + GKV AKTG+ V L+G++ + Q + Sbjct: 406 LLKGKVFAKTGTETTVVALSGYLYANNKQYI 436 >UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, peptidase family s13) n=2 Tax=Oxalobacteraceae RepID=A6SVJ3_JANMA Length = 475 Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 114/413 (27%), Positives = 185/413 (44%), Gaps = 25/413 (6%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 VQ+V P I + PAST K++T+ AAL LGP F + T G + VL G Sbjct: 52 VQEVSGQKPWIAVNETTGFNPASTMKLVTSDAALELLGPTFNWKTQAYMTGTLNGDVLDG 111 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF-------ASHDKAPGWP 152 DL+ + DP L ++ + ++ +G+ +I GN+++D SIF A D P P Sbjct: 112 DLIIKGSGDPKLVTENFWQFLRKIRAAGIREIRGNLILDRSIFEDMPYDAAQFDGDPLKP 171 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYS--APKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 +N A P A +++ F+ A D+ + YPV L G Sbjct: 172 YN-------AGPDALLLNYKVFAFHFLPNVARNQVDITIDPPVATYPV----MAPALTNG 220 Query: 211 SAEAQYCELDVVPGDLN-RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 + +L G ++ FT + + L + + + Y G + + G Sbjct: 221 ACGDWQGKLLPNMGRVSTNFTGSYSAACGEKTWYLHPYLMNHSEYFGVVFRQLWNDVGGV 280 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 ++G + V V QS L ++++ + K S+N++A + + VP + Sbjct: 281 FNGAV-NNGMVPPAARFVTEWQSTSLPEVIRDINKYSNNVMARQLLLTVAADVLKVPASP 339 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G+ V+ L + G+D +I +GSGLSR I M ++L Q F+S Sbjct: 340 ERGARVVKTWLANK-GMDTSQVVIENGSGLSRTERIPVGVMGRMLVSTFQSPTMPEFMSS 398 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 LPL GYDG+++ R L + V G+ KTG+L V +AG++ ASG+R A V Sbjct: 399 LPLVGYDGTMRKR--LTKQTVAGRAHIKTGTLNDVRAIAGYVLAASGKRYAVV 449 >UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=9 Tax=Xylella fastidiosa RepID=Q3R3H3_XYLFA Length = 498 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 118/415 (28%), Positives = 189/415 (45%), Gaps = 34/415 (8%) Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 A PAS K++T +A LG D++F T+L T G + G L G+L + DPTL D Sbjct: 85 ASPASNLKLVTLYSAFSVLGSDYKFETSLMTDGTQKEGHLSGNLYLKGTGDPTLSADDYD 144 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 + L G+ +IDGN+++D + F S GW +D + FSA +A N Sbjct: 145 RLAKDLAARGIRKIDGNLVLDDTSFDSIALGSGWMIDDEDKYFSAQISALTFSPN----- 199 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 A I V++ ++ LPR + VV G+ + T++ + Sbjct: 200 ---ADFNAGSVIIDVSAAGTENSTPKITVLPRNNVVKVINR--VVNGNTSAVTVSRA--R 252 Query: 238 RSEPLPLAFAVQDGAS------------YAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 S + ++ V+ G S I + LK+ GI +G + Sbjct: 253 GSNDIYVSGTVKAGDSIQELCSVWMPSLIVSDIFQTALKRHGIEVAGHAVVGQATPMQAL 312 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 ++ +QSAPL L+ ++K S++ +A+ + IG N G+ AG A +L G Sbjct: 313 MLVRRQSAPLESLVIPLMKLSNDTMAEIFLKSIGRKSLN-QGSASAGIQATLSVLAMD-G 370 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQ 400 ++ + + DGSGLSR+NLI + +L + F + LP+AG G+L+ Sbjct: 371 INSESLVQVDGSGLSRYNLITSRILTDILLAARKKPWFAAFYASLPVAGQPDRLIGGTLR 430 Query: 401 YRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 R + +GKV AKTGSL GV +L+G++T A + F L+ + ADQ Sbjct: 431 NR--MRGTAAEGKVIAKTGSLTGVSSLSGYVTAADEYPLVFSILLNNLIIS-ADQ 482 >UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERE3_OCEIH Length = 459 Score = 127 bits (320), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 115/421 (27%), Positives = 189/421 (44%), Gaps = 22/421 (5%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 AG L L V+ ++ PAS K++TA+AAL LGP +RFTT + +G Sbjct: 18 AGGILGLSVRSADTGDIYFSHNGDIRLHPASNMKILTAVAALKILGPGYRFTTEIRLEGK 77 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + V +GD+ DPTL+ D + L K G+ +I G+++ D + + + Sbjct: 78 LVGDVWEGDVYIVGKGDPTLQLNDYQRFATILHKYGIRKITGSIIADDTWYDDIRLSEDL 137 Query: 152 PWNDMTQCFSAPPAAAIV--DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 W+D + A +A + D++ + S+ KPG + YP T + + Sbjct: 138 IWSDAQYYYGAEVSALTLSPDKDYDTGSVKIIIKPGQLGDPPEYQLYPNTSYVMIENHAV 197 Query: 210 GSAEAQYCELDVV-PGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 A+ EL + + NR + G + + AV Y L + GI Sbjct: 198 TVDHAEEEELCITREHNGNRIYIKGKIGINQDIRKEWMAVWGVTDYVVNTFVQALNETGI 257 Query: 269 TWSGTLLRQTQVNEP-GTVVASKQSAP-LHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 T +T + P GT S+P L ++L +K S+N I + + + +G + Sbjct: 258 TIKDK--SKTGRSVPSGTACIHVHSSPTLAEILIPFMKLSNNGIGEMLVKEMGRFVYE-E 314 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 GTW AG +++ + Q GV++ I DGSG+S +NL+ + +L I + Sbjct: 315 GTWEAGLKVMKEQI-QSYGVNMKTLQIKDGSGISHNNLLPANELTHLLHCIQTEEWFPLL 373 Query: 387 ISMLPLAGYD-----GSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LPLAG G+L+ R GL V AKTG+++GV L+G+I + QR+ Sbjct: 374 LDTLPLAGEQNRMVGGTLRERMKGL-------SVKAKTGTIEGVSTLSGYIKMETDQRVI 426 Query: 441 F 441 F Sbjct: 427 F 427 >UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Chroococcales RepID=Q4C8Q4_CROWT Length = 491 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 42/420 (10%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-G 95 ++V+ + + +SQ+ +PAS K++T A LI+ G +++ T + G+ N Sbjct: 68 GILVKNLDNQTTLYELNSQKYFIPASNVKLLTTAATLIKFGANYQIKTPVYVSGSYPNLS 127 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 VLK +V + DPT + + + LK G+N ID N+++ S P W W D Sbjct: 128 VLK--IVGQ--GDPTFNSKQLETLAKELKARGINSID-NLIVQDSPLEKPSINPTWEWED 182 Query: 156 MTQCFSAPPA-AAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 + Q + AP I++ N ++L + +A S +T+ G ++ Sbjct: 183 I-QFYYAPAVNKLILNENTVILTLNTQEIGEKLAMDWSDSIAANQWIIDNKTV-TGEEDS 240 Query: 215 QYCELDVVPGDLNR------FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 Y +NR T+TG L S+P L V + Y ++ L++ GI Sbjct: 241 SYSV------SINRNFAKPLLTITGSLAINSDPRILGMTVVNPGEYFLNSVQFYLEKEGI 294 Query: 269 TWSGTLLRQTQV------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 + ++QV E + S PL +++ + S+N+ A+++ ++ Sbjct: 295 N-----IIKSQVVYGDSATENLVKIIEINSDPLQEIITKTNQDSNNLYAESLLNLL---- 345 Query: 323 FNVPGTWRAGS-DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 V GT S D +++IL + G+D + + D SGLSRHNL+ P T++ +L +A+ Sbjct: 346 --VNGTPENSSLDNLKEILTE-LGLDTNSYHLKDASGLSRHNLVTPETLVNLLTLMAETP 402 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 +N+ LP+ G +G++ R + ++GKV AKTG+L G +L+G+I + +AF Sbjct: 403 EGINYRDSLPIGGVNGTITNR--FKKTIIEGKVQAKTGTLSGTSSLSGYINPPNYAPLAF 460 >UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDC7_ACAM1 Length = 488 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 120/425 (28%), Positives = 200/425 (47%), Gaps = 36/425 (8%) Query: 22 NVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++DE +Q L A L + VQ + AS P +Q+ LPAST KV+T AAL +LGP F Sbjct: 39 DMDEIASQPLFTQARLGIAVQPLQASQPLYTKDAQRYFLPASTTKVMTTAAALTRLGPQF 98 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 R T + G G L DPTL Q ++ + LK+ G+ QI+ ++L D + Sbjct: 99 RIQTDIYGSG---TGPALDHLRIVGRGDPTLSDQQLQQIATQLKQKGIRQIN-HLLGDDT 154 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY--SAPKPGDMAFIRVASYYPV 198 F P W W D+ + AP + I+++N + + ++ + +P + ++ P Sbjct: 155 YFQGPGIVPSWEWEDLQAGYGAPVNSLILNQNAYELKIWPQALGQPLRVEWLSPHPIGPW 214 Query: 199 TMFSQVRTLPRGSAEAQYCEL-DVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA-- 255 ++ RT+ + + E Y E+ + G+ +TG L + A AV D + Sbjct: 215 RQINRTRTVAQNAPE--YIEIVRRLKGNTLEIEITGQLRAGAPHDRSAVAVIDPGWFLLK 272 Query: 256 --GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK------QSAPLHDLLKIMLKKSD 307 AIL + + G +LL Q S+ QS+PL L+KI ++S+ Sbjct: 273 RFRAILAAQQIKVGRL---SLLSTPQERNAALKGKSEQRLTQIQSSPLTTLIKITNQESN 329 Query: 308 NMIADTVFRMIGHARFNVP-GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 N+ A+ + + +G A+ T + G A++Q L Q GV+ +ADGSGLSR NL++ Sbjct: 330 NLYAEALVKALGAAQKQTSQNTHQQGLKALKQTLT-QLGVNASTYAVADGSGLSRQNLVS 388 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P + Q L I + + F + LP + + Q + +K+G ++GV Sbjct: 389 PLALTQTLNGILKSPHASTFQTSLP----------KDSIGQNSPSA-LWSKSGGMRGVST 437 Query: 427 LAGFI 431 L G++ Sbjct: 438 LTGYL 442 >UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxalobacter formigenes RepID=C3XCM9_OXAFO Length = 473 Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 112/448 (25%), Positives = 199/448 (44%), Gaps = 43/448 (9%) Query: 10 LTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 L S + + ++ A + E ++ ++V++V ++ + +++ PAST KV+T Sbjct: 28 LPSSVKYELELAGIPE--------NSVGIVVEQVDSNVSRLTHNADIAFAPASTMKVLTT 79 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AAL LGP + + T G E+GVL GDL+ + DP ++++ + ++ +GV Sbjct: 80 YAALELLGPSYTWETGAYISGKPEDGVLYGDLIIKGSGDPVFSQKELWLFIRQIQDAGVR 139 Query: 130 QIDGNVLIDTSIF-------ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 I GNV++D S+F A+ D P P+N A P A +++ V L Sbjct: 140 DIRGNVILDRSVFKTGSFDAAAFDAEPLKPYN-------AGPDALLLNEKKIDVRLV--- 189 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLP--RGSAEAQYCELDVV------PGDLNRFTLTGC 234 P + + P V+ P + E + D+V + + + C Sbjct: 190 -PNESENTVKVVFEP--RLDGVKITPPLLSNGECGNWKKDIVLQFDDRHANFDGIYSSTC 246 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 + LP + Y ++ K+AG + G + T E +A +S Sbjct: 247 QEKIWSVLPYQMS---NTRYFESVFSTLWKEAGGRFKGRFVDGTLPPE-ALKIAEWRSPE 302 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L ++ + K S+N++A + IGH G A++ L + + G+ +I Sbjct: 303 LSSVVSTVNKHSNNVMARQLLLGIGHHELGDNADESMGIKAIKNWLASK-NISSGDLVIE 361 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 +GSGLSR I+P TM ++L+ +S P+AG DG++ R L + + GK Sbjct: 362 NGSGLSRLEKISPLTMSRILKAAFHSPVMPELMSSFPIAGKDGTMSKR--LKEDAIAGKA 419 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFV 442 KTG++ V +AG++ SG+R V Sbjct: 420 HIKTGAIDNVRAIAGYVLAKSGRRYIVV 447 >UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIC0_BDEBA Length = 436 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/398 (26%), Positives = 195/398 (48%), Gaps = 15/398 (3%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 +D + +M +PAS K+ TA A L P +F T L T G++++G LKG L + G DP Sbjct: 22 LDVNGNKMMVPASISKIATASAVLASFPPGTKFKTQLLTSGDLKSGTLKGTLYLKGGGDP 81 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 + +++ +V ++ + +I+G++++D S+F + + + AP A Sbjct: 82 SFVSENMWYLVNAFTRTKIKKIEGDIVVDDSLFDRVRYDLSRQKERVDRAYDAPVGAMSF 141 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELD---VVPGD 225 + N ++ A G+ A + + + + ++ +T+ GSA + D PGD Sbjct: 142 NWNSVNI-FVRANGAGNGAEVTIDPENDYIRLVNKAKTVS-GSANNLLADRDEDKKFPGD 199 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 + + G + Q + + + + +AG LK L Q GI +GT +R E Sbjct: 200 V--IHVGGSIGQGLKEVVVFKNITQPDLWAGYNLKAFLAQRGIQLTGT-IRNGVTPEKAE 256 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 +VA +S P+ ++ M K S+N +A+ + + +G + T G + + + Q G Sbjct: 257 LVAESESKPIEQMVADMNKFSNNYVAEMLTKNLGAVKKTKGATLADGVLVINEHM-QSLG 315 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL--NFISMLPLAGYDGSLQYRA 403 V + SGLSR N ++ M +VLQ++ ++D + F++ LP+AG DG+L+ R Sbjct: 316 VPAEQYNLQSPSGLSRQNKLSSFAMWKVLQHL-RNDFRVQPEFLTSLPIAGVDGTLKKR- 373 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + + + V AKTG L GV +LAG+ G+ + F Sbjct: 374 -MKNSPAERWVRAKTGFLTGVVSLAGYAGLEDGRVVTF 410 >UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G894_9DELT Length = 543 Score = 125 bits (315), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/406 (26%), Positives = 183/406 (45%), Gaps = 41/406 (10%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRN 118 PAS K++T AAL LGP+ R++T + T G ++ +GVL+GDL + G DP+L ++ Sbjct: 135 PASNAKLVTTAAALSILGPEHRYSTRVWTAGTIDADGVLQGDLYLQGGGDPSLVTGEVYE 194 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 + L +G+ ++ G +++D + F PG+ AP A V+ N F V Sbjct: 195 LAGQLVAAGLTRVKGKIIVDATRFDGDGWPPGFEQKSEFASHRAPGGAMSVNYNTFEVHA 254 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF--------- 229 +PG V +R LP A + V G N+ Sbjct: 255 ----RPG-----------AVGASPTLRLLPEVDDLALESKATTVAGKRNKLWVSTREEGG 299 Query: 230 ----TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT-QVNEPG 284 T G + + + V D + YAG +L L+Q G+ Q+ +V + Sbjct: 300 KTVVTFHGEIGTEAPAASYRYPVADPSRYAGELLALSLRQRGVKLGNKARAQSGEVPKDA 359 Query: 285 TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR--Q 342 ++A+ +S L L + + K S+N +A+ + R + PG A+ ++ + Sbjct: 360 RLLATHRSETLSQLCRSVNKWSNNFMAEQILRTL------EPGDGATAEQALERMREYTK 413 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGYDGSLQY 401 GV+ ++ +GSGL +N I+PA M Q+L + A ++++ L + G DG+ + Sbjct: 414 SIGVEQSGLVLGNGSGLYDNNAISPAAMTQLLAAVYADFRIRSDYLASLAVMGKDGTTRS 473 Query: 402 RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 R LH + G V KTG+L V L+G+ +AF ++G Sbjct: 474 R--LHDSQAGGWVRVKTGTLDDVSALSGYAGAQGKDPIAFSILMNG 517 >UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCC2_9PROT Length = 468 Score = 125 bits (314), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 107/416 (25%), Positives = 191/416 (45%), Gaps = 14/416 (3%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 + + V ++G+S P + ++ PAS K++T A L LGP + + T L G + + Sbjct: 44 IGIYVHEIGSSQPVLTINADSSMNPASVMKLLTTYAGLELLGPAYTWQTILYANGKITDD 103 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 VL GDLV + DP L ++ +V L+ +G+ +I GN+++D S + + PG Sbjct: 104 VLYGDLVIKGYGDPKLDLENFWLLVHRLRLTGLREIKGNLILDHSHYEIPRENPGEFDEQ 163 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR-TLPRGSAEA 214 + ++ PP A +++ + L+ P+ + + + + + ++ T + A Sbjct: 164 PYRTYNVPPEALLINYRASTFHLFPQPEKNSVRVVIDPVPESLRIKNNLKLTQDKCVAWQ 223 Query: 215 QYCELDVVPG--DLNRFT--LTGCLPQRSEPLPLAFAVQDGASYAGAILKD-ELKQAGIT 269 ++ + N FT L G Q ++QD ASY + + ++Q GI Sbjct: 224 NSLTIEAIADKESKNNFTIILNGRFSQHCGKQSYMLSLQDSASYTDDLFRQLWIQQGGIF 283 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF---NVP 326 T+L Q P + QS PL ++++ + K S+N+ A ++ +G N P Sbjct: 284 NGHTILGQAPQYLPPLKI--HQSPPLAEIVRGINKFSNNIAARQLYLALGTGNSSIDNSP 341 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 T A+R+ L + ++ +I +GSGLSR I+ M ++L F Sbjct: 342 ATLAKSDAAIRRWLASKQ-MNFTELVIENGSGLSRKERISARHMGKLLLAAFNSPVMPEF 400 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 I+ LP+A DG+L+ R G KTG+L V LAG++ G+R+ V Sbjct: 401 IASLPIAAVDGTLKNR--FADTPAKGLAHMKTGALNNVRALAGYLIDGMGRRVIIV 454 >UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5P5_GEMAT Length = 545 Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 106/400 (26%), Positives = 189/400 (47%), Gaps = 20/400 (5%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIR 117 +PAST K+ T+ A +LGP+ F+T + G V+ NGVL GDLV R DP+L + +R Sbjct: 132 VPASTMKLFTSAIAFEKLGPEHTFSTDVLRDGTVDANGVLSGDLVLRGDGDPSLSPRFVR 191 Query: 118 -------NMVATLKK-SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 N++A +G+ ++ G+++ D S F S GW ++AP +A + Sbjct: 192 GGPDASMNLLAQFTAGTGIKRVTGDIIADASAFESRRIPEGWLSRYAGAGYAAPFSALSL 251 Query: 170 DRNCFSVSLY-SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR 228 + N V + G F+ A+ +T+ + VRT+ G + + GD +R Sbjct: 252 NENIVIVGVTPGGSGDGAKVFLEPATQA-LTITNTVRTVAGGGSRITARRV----GD-DR 305 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA 288 ++G + R+ + V D +++ + L+ G+ G + + + TVV Sbjct: 306 VVVSGTIGARAGTVRYQLVVGDPSTFTAGAFRAALEAQGVKVDGA-TKAGRTSSTATVVT 364 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH-ARFNVPGTWRAGSDAVRQILRQQAGVD 347 S S PL L+ +M ++S N+ A+ ++R A G+ + ++ + +Q G Sbjct: 365 SLPSPPLARLVSVMNRESINLYAEMLYRNAARGADKTTVGSAETAATVLKDFMVRQVGAA 424 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 DGSGLS + + P +++Q+L + F + LP+AG L+ R + Sbjct: 425 PDAVTATDGSGLSVLDRVTPRSLVQLLDHAHHAQWGSAFHASLPVAGESELLRNR--MRA 482 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 G + AKTG+ V L+G++T +G+ +AF +G Sbjct: 483 TPAQGNLHAKTGTTNDVIGLSGYVTAENGEILAFAFLYNG 522 >UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH25_HALO1 Length = 514 Score = 124 bits (312), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 127/447 (28%), Positives = 204/447 (45%), Gaps = 44/447 (9%) Query: 12 SCIAFSVQAANVDEYITQLPAG------ANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 S I A ++ I L AG A + + VQ +G A + AS K Sbjct: 35 SGIGMEAAALSLGARIDALLAGHAPLTDARVGIFVQDLGTGAVLYAREAGNSFNVASVTK 94 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 VIT A+L LGPDFR+ T + T +E V+ G+L + +PTL D+ + L++ Sbjct: 95 VITMAASLALLGPDFRYRTAVLTD-KIEGSVVTGNLYLQPRGNPTLSSADLELLSTHLER 153 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ-CFSAPPAAAIVDRNCFSVSLYSAP-- 182 +G+ QI G +++D F P + Q F AP AA ++RN F+V + +A Sbjct: 154 AGITQIRGELIVDAGYFDDAASPPHFDEQPEEQAAFRAPVGAANLERNAFTVRVRAARAG 213 Query: 183 --------KPGDMAFIRVASYYPVTMFS---QVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 +P + +++R+ +T S VR + + + + +DVV Sbjct: 214 GQRAAVWIEP-ETSYVRLGRDEVITQSSGRDSVRVVSKLDDDGRMV-VDVV--------- 262 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 G + S+ + ++D ++AG + L G+ R +V ++A+ Sbjct: 263 -GRVRAGSDTMGFRRRIEDPVAFAGETFRAVLAARGLRIRKP-SRAGEVPSDARLLATVD 320 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMI-GHARFNV----PGTWRAGSDAVRQILRQQAGV 346 S PL +++ + K SDN +A+T+ + I R N P TW G AV + L Q G+ Sbjct: 321 SEPLSVMVQRLGKYSDNFVAETLLKTIAAEHRANADAAPPATWAEGVAAVERFLVDQVGL 380 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL--NFISMLPLAGYDGSLQYRAG 404 D +GSGL + +PA + VL AQ D +S L +AG DG+L+ R Sbjct: 381 DDDAFRYENGSGLFDASGFSPAQVGAVLA-AAQGDMRYGPELMSALAIAGVDGTLRGR-- 437 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFI 431 + + G+V AKTG+L V LAG+I Sbjct: 438 MKRTDARGRVRAKTGTLAAVIALAGYI 464 >UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C561_HYPNA Length = 480 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 121/410 (29%), Positives = 187/410 (45%), Gaps = 35/410 (8%) Query: 54 SQQMALPASTQKVITALAALIQLG----PDFRFTTTL--ETKGNVENGVLKGDLVARFGA 107 +++ +PAS KV T+ AA L PD T+L E G E DLV Sbjct: 61 AEERFIPASNTKVFTSAAAFHYLTGLDTPDPAGGTSLWLEPGGEGE----APDLVLMGAG 116 Query: 108 DPTLKRQD------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 DP L + + + +G+ ++ G+V+ D ++ + GW WN+ ++ Sbjct: 117 DPGLMDSADCVDNCLHQLADAVVAAGITRV-GDVIGDDTLLPAALWGQGWSWNNFVWYYT 175 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP----VTMFSQVRTLPRGSAEAQYC 217 AP +A V+ N +++ PG+ A V S+ P + + ++V T P GS Q Sbjct: 176 APISALTVNENTLGLTVSPGAAPGEPA---VLSWAPGDDLLLVDNKVITGPPGSL--QTL 230 Query: 218 ELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL-LR 276 + VPG L LT +P + P A A+ D A A L + G+T G + R Sbjct: 231 RMVRVPG-LEMLRLTEYIPADAAPRMYAVAMHDPAETAALRFVRLLIERGVTVEGLMRAR 289 Query: 277 QTQVNEPG--TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD 334 + P ++A AP+ + +L S N+ A+ + R I AR + G Sbjct: 290 HEADDSPAEQVLIARLTPAPIKASIGRILVNSQNLHAELLLRKIALARGQLS---PEGGQ 346 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG 394 V L +AG+ + DGSGLS +N + P M Q L++ A + +MLP+ G Sbjct: 347 EVLTALVAEAGLTPVEAELFDGSGLSTYNRVTPRGMAQFLRWAAGQPWGDAWRAMLPVGG 406 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 DG+L R ++GKV AKTGSL GV L+G++T SGQ + F Y Sbjct: 407 ADGTLARR--FKGTSLEGKVFAKTGSLHGVNALSGYMTARSGQTLVFAVY 454 >UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESX9_AMOA5 Length = 532 Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 115/450 (25%), Positives = 197/450 (43%), Gaps = 60/450 (13%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTLKRQDIR 117 +PAS+ K+ T AL LG DF+F T L+ G V+ G L+G+L DPTL + R Sbjct: 75 VPASSLKLFTTATALEILGEDFKFQTRLQYNGEVDKRGTLRGNLYILGEGDPTLGSKMFR 134 Query: 118 NM----------VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 + T+K G+ +I+G V+ DT + W D+ + A + Sbjct: 135 EYYYDPYFIETWINTIKAKGIKRINGAVIGDTKTLEDYTAPDTWVVEDLGNEYGAVYSEL 194 Query: 168 IVDRNCFSVSLYSAPKPGD---MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG 224 + N + + P+ D + ++++ P + + L R + Q+C + +P Sbjct: 195 SIFDNKYEMLF--MPRLIDETKLDIVQISPQIPEEV-KIINRLQRVGDKYQFC-IYGMPY 250 Query: 225 DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT--------------- 269 R + G +PQ L + ++ D A +A L++EL++ GI Sbjct: 251 KNTRI-IKGAIPQDKLTLVVKASIPDPAYWAAYTLRNELEKNGIKVKKGPTTTRRKQELH 309 Query: 270 -WSGTL---LRQTQVNEPGTVVASKQ----------------SAPLHDLLKIMLKKSDNM 309 G L +RQ + + G SK+ S PL D++ I ++S+N+ Sbjct: 310 LHKGNLEPEIRQVKRQQEGKYQKSKRNVKKDETPRVDLYTNYSPPLKDIVVITNRESNNL 369 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQI-LRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 A+ + IG ++ G + I AG+D + DGSGLSR+N I Sbjct: 370 YAEHIINQIG---LHIAGKEDTENGIKAAIDFWCAAGIDTTGIFLHDGSGLSRYNSITTK 426 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 ++ +L Y+ N F LP+AG G+L + +A + G + AKTG ++ V + Sbjct: 427 QLVDILCYMKNSKNFDAFYHSLPIAGETGTL--KELFTKAPLKGNLKAKTGGMKRVLSYT 484 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRNR 458 G+ TT SG +AF ++ Y P + + + Sbjct: 485 GYCTTISGTEIAFSLIVNNYNGTPKELKQQ 514 >UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Betaproteobacteria RepID=Q47J01_DECAR Length = 479 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 107/416 (25%), Positives = 201/416 (48%), Gaps = 12/416 (2%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 Q+PA N+A+++Q V + +P + +++ Q PAS K++T AAL LGP + + TT+ T Sbjct: 35 QIPA-KNVAVVIQAVDSGSPLVAHNASQAMNPASVMKLVTTYAALDLLGPAYTWKTTVWT 93 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 + +G+L G+L + DP + + +++ L+ G+ QI G+V++D + F Sbjct: 94 ESAPVDGILSGNLYIKGSGDPRFAIEHLWSLLRQLQVRGIRQIAGDVVLDRTAFNVPSID 153 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR--T 206 PG + + ++ P ++ N S+ P G + + + +Q+R Sbjct: 154 PGAFDDKPMRPYNVGPDGLLL--NFRSLRFTLVPDNGKPRVLMETPSEGLRVDNQLRAGN 211 Query: 207 LPRGSAEAQYCELDVVPGDL-NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 GS + ++P + NR TG PL + + A +++ K+ Sbjct: 212 GDCGSNWKDLINVRLIPENSGNRLEFTGTYSALCGEKPLNLSPLPADAQADGLIRALWKE 271 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 G +G +R V ++A +SAPL D ++ + K S+N++A VF +G+ + Sbjct: 272 LGGNLNGQ-VRGGTVPIGAKLLAQHESAPLADAVRDINKFSNNVMARQVFLTLGND--SA 328 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 P T + L + + G ++ +GSGLSR I+ ++ ++L ++ Sbjct: 329 PATAERSKQRISDWLAAR-NLRFGELVLDNGSGLSRVERISADSLNRLLLDAWKNPVMPE 387 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 F+S +P+ G DG+++ R L+ + G+ KTG+L GV +G+ A G+R AF Sbjct: 388 FVSSMPIVGIDGTMKKR--LNSSEATGRAHIKTGTLDGVKAASGYALDALGRRYAF 441 >UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT5_HALNC Length = 489 Score = 123 bits (308), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 111/420 (26%), Positives = 195/420 (46%), Gaps = 22/420 (5%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 +L + VQ V ++ P + + + PAS K++T++ AL LG +F++TT + Sbjct: 53 GDLGIWVQAVDSNKPLLTHLPDDLFNPASVMKLVTSVVALDVLGTNFQWTTRVYADALPV 112 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP- 152 NGV+ G+L + DP + +D+ ++V L G++++ G +++D S F D P P Sbjct: 113 NGVVHGNLYIKGEGDPWFRSEDLWDLVRQLSDLGIHEVTGKLVLDNSYF---DPGPADPS 169 Query: 153 -WNDMTQ-CFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 ++D + ++A P A ++D V + + G A +R + L +G Sbjct: 170 DFDDHPERVYNALPQALLLDNRATRVLIVPPDRSGAGAVVRAWPPNSNIAINNDVKLVKG 229 Query: 211 SAEAQYCE--LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG----ASYAG--AILKDE 262 + Q + + V+ D N TL +E P F + G A Y+ + + + Sbjct: 230 ACTGQTNQPSIAVLGPDTNTPTLNVSGKISTECQPDQFYLVAGNANDAFYSAFKHLFEGQ 289 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 + TW+ ++ +T V + S L L + K S+N++A +F +G Sbjct: 290 GGKIDGTWAEGVVPKTAV-----YLVQHNSENLTQYLYLQNKWSNNLMARQIFLTMGAEI 344 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 PGT + L++Q G + I +GSGLSR I+P M Q+L Y + Sbjct: 345 KGAPGTLLKSKAVIADWLKRQ-GFNWPGFDIENGSGLSRKARISPKEMGQLLMYAWRSPT 403 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 ++ LP+AG DG+++ R + G + KTG+L+ V AG+I T SG+R V Sbjct: 404 MPELMASLPIAGIDGTMRKR--MRGEPARGMIHLKTGTLRDVRAGAGYIITQSGRRYVVV 461 >UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Chromobacterium violaceum RepID=Q7NYZ7_CHRVO Length = 463 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 126/425 (29%), Positives = 192/425 (45%), Gaps = 34/425 (8%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 +A+ V APAI + + PAST K++T AAL +LGPD+R+ T L + VE Sbjct: 29 EIAVWAAPVEGDAPAITHRADAPVNPASTMKLLTGWAALNRLGPDYRWKTALLSAAPVEG 88 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 G LKGDL G DP D+ +++ +L+ G+ Q+DG +L+D F + A + Sbjct: 89 GALKGDLYWLGGGDPRFDNGDLLSLLYSLRLRGIRQLDGRLLLDKRAFGNVGGADDFD-G 147 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE- 213 D + F P A + + ++ ++ D RVA P+ L G + Sbjct: 148 DAGRAFVVGPDAHLTNLKVAWLTFFN-----DGQGARVALDPPLAGVELRAALTPGPDQP 202 Query: 214 -AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 A + D R +TG LP + V D ++AG L QA + SG Sbjct: 203 CADVRRFVSIDNDGRRVRVTGSLPPACDGQRAYVNVLDHDAFAGQDFS-ALWQA-LGGSG 260 Query: 273 TL-LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 L + + + + +AS QS PL L + K S+N +A T+F +G A Sbjct: 261 PLRVARGRAPDDARELASWQSQPLAVALSDINKYSNNTMARTLFLTLGRA--------AG 312 Query: 332 GSDAVRQI---------LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 G D LR A D G + +GSGLSR + + +VL A+ Sbjct: 313 GEDTAAAAERALREELSLRGIA--DAGALRLENGSGLSRRERVTARLLGEVLLDAARGPY 370 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 FI+ LP+A DG+L+ R + G ++ KTG+L V LAG+ A G+R+A V Sbjct: 371 AGEFIASLPIAATDGTLKKR--FVELGP--RLRMKTGTLNDVKALAGYWQAADGRRLAIV 426 Query: 443 QYLSG 447 ++G Sbjct: 427 AIVNG 431 >UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2C7_9PROT Length = 494 Score = 122 bits (305), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 116/481 (24%), Positives = 210/481 (43%), Gaps = 45/481 (9%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQM 57 R L C+A +V AA++ + Q A++ A+ V++VG AP I ++Q+ Sbjct: 1 MKRPYAALLLCLAVNVHAASLPATVVQELKNAHIPRSGIAVEVREVGKHAPLISINAQRP 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAST K++T ++L LGP + + T G +++GVL G+L+ + DP + Sbjct: 61 MNPASTMKLLTTYSSLDLLGPAYTWKTEAWIDGELKDGVLDGNLILKGYGDPKFTIEQFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++ L+ G+ +I G++++D S F PG D + ++ P A +++ N + Sbjct: 121 LWLSELRARGLREIRGDLILDRSYFDLPPYDPGAFDADPVRAYNVGPDALLLNFNTLRLR 180 Query: 178 LYSAPKPGDMAFIRVASYYPV---TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 D ++V + P+ T+ +Q+ + +L V + L G Sbjct: 181 YMP-----DGIGLKVVTEPPLDGMTLHNQLTPNNEKVNCDNWDDLFQVQPQGDSVVLQGD 235 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 P +V Y GA+ K+ G T G R V + ++ +S P Sbjct: 236 YPMGCGEREQNLSVMPHTRYVGAVFSAVWKELGGTLQGK-ERDGVVGTGAKLFSTHRSEP 294 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGH----ARFNVPGT--------------------WR 330 L +++ + K S+N++A +F +G A+ N P T W Sbjct: 295 LSSIIRDINKYSNNVMARQLFLTLGETVPVAKDNEPPTENEPASGVAATQASFPENEEWT 354 Query: 331 AGSDAVRQILRQQAG-----VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 R +L Q + ++ +G+GLSR+ I+ A+M ++LQ Sbjct: 355 GRMSIERSVLAMQLWLARNHLHFPELVLENGAGLSRNERISVASMDKLLQLAYDDPLSAE 414 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL 445 + LP+ G DGS++ R L + KTG+L+GV +AG++ + SG+ V Y+ Sbjct: 415 LQASLPILGVDGSVRRR--LKDSPAASHAHLKTGTLEGVKTIAGYVRSKSGREWIVVFYI 472 Query: 446 S 446 + Sbjct: 473 N 473 >UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW12_EIKCO Length = 475 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 128/459 (27%), Positives = 206/459 (44%), Gaps = 24/459 (5%) Query: 10 LTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 LT + F Q A ++ P A A+ VQ + + + + + PAST K++T Sbjct: 17 LTFALFFYFQVAFAIDFGRIQPDEA--AVYVQDLDSGEVLLAHRADVSMNPASTMKLVTT 74 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AAL LG D+R+ T + G V NG L+GDL DP + D+ +M L + G+ Sbjct: 75 FAALRGLGGDYRWQTQWRSSGTVANGALQGDLYWVGSGDPAFDQPDLLDMQQQLVRQGIV 134 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 ++G V++D ++ A G+ ND + F PP ++ ++ + + G AF Sbjct: 135 SLNGKVVLDRRVWGGLASAEGFE-NDADESFVVPPDPHMIAYKALWIT-AARNETGQPAF 192 Query: 190 IRVASYYPV-TMFSQV-RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 + Y + T SQ+ T R + + G L G LP + Sbjct: 193 LLNPPLYGIQTDLSQLTETDGRCGKLSNHVSAKFENGML---VFRGRLPAACMGEKMFIN 249 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT--VVASKQSAPLHDLLKIMLKK 305 + D +A + G+ G L + P ++A+ S L ++L M K Sbjct: 250 LFDAPRFAEESFRGYWLAQGL---GGLYGFGRGAAPSNSRILATHFSKSLGEVLTDMNKH 306 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 S+N+IA +VF +GH + N P + + AVR+ L AG+D ++ +GSGLSR + Sbjct: 307 SNNLIARSVFLTLGH-QANGPHSVQNAEAAVRRQL-VSAGLDDEALVLENGSGLSRRERL 364 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 + +L + FI LP+AG DG+L+ R Q G + KTG+L+ V Sbjct: 365 TARFLGSMLFQAYRSPFRDTFIHTLPIAGTDGTLRGR--FRQLGR--SLRMKTGTLRDVR 420 Query: 426 NLAGFITTASGQRMAFV----QYLSGYAVEPADQRNRRI 460 LAG+ +G+R+A V + SG + D RRI Sbjct: 421 ALAGYWLPPNGRRLAVVVIINSHRSGGYLPDMDAMVRRI 459 >UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family n=6 Tax=Burkholderiaceae RepID=Q0KE47_RALEH Length = 533 Score = 121 bits (304), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 122/439 (27%), Positives = 190/439 (43%), Gaps = 61/439 (13%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLK 98 V ++GA +++QQ PAST K++T A L LGPD+R+ T+L +G + Sbjct: 101 VVRLGAGTARASWNAQQPMNPASTMKLVTTFAGLQLLGPDYRWQTSLYADAQPGFDGTVN 160 Query: 99 GDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ 158 G++ R DP L +++ +VA + G I+G++++D S FA G ++ + Sbjct: 161 GNVYLRGHGDPKLVPEEMAKLVAKARAGGATGINGDLVLDRSYFADGLDGNGTIDGEVQR 220 Query: 159 CFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 ++ P A + S +L P +A V P E + Sbjct: 221 AYNVGPDALLYAFKTLSFTLTPDPASQTVA---------------VSVTP----ELAQLK 261 Query: 219 LDVVPGDLNRFTLTG--CLPQRSEPLPLAFAVQDG---ASYAGAILKD---------ELK 264 LD NR TLT C +S P DG AS++G D L Sbjct: 262 LD------NRLTLTNGRCGDWQSSASPSVLPQADGTVLASFSGDYASDCGEHVLNIATLS 315 Query: 265 QAGITWSGTL---------------LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 A TW G + LR +V ++A PL D+++ + K S+N+ Sbjct: 316 HAEFTWGGFVAEWQRAGGRFAHMPALRSGKVPRGAVLLARHYGLPLADIVRDINKFSNNV 375 Query: 310 IADTVFRMIGHA--RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 +A +F IG R T R+ R + RQ G+D+ ++ +GSGLSR I+ Sbjct: 376 MARQLFLTIGAEMDRGGPASTGRSIRVVQRWLARQ--GLDMPGLVLDNGSGLSREERISA 433 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 M ++LQ A + I LP+ G DG+L+ R L +A G KTG+L V L Sbjct: 434 YDMARLLQQAAASNVGPVLIDSLPVLGVDGTLRNR--LTRANAAGNGYLKTGTLADVRAL 491 Query: 428 AGFITTASGQRMAFVQYLS 446 AG++ A G R V ++ Sbjct: 492 AGYVDAADGGRYVVVSMIN 510 >UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax=Actinomycetales RepID=D2AVR4_STRRD Length = 516 Score = 121 bits (303), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 123/433 (28%), Positives = 200/433 (46%), Gaps = 28/433 (6%) Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 S ++ PAS K++T+ AA LG DFRFTT++ + G L G+L + DPTL Sbjct: 74 SGKVLTPASNAKLVTSAAAADTLGLDFRFTTSVLSTGRRAGSALTGNLYLKGTGDPTLLA 133 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA--AIVDR 171 D + A + SG+ + G ++ D + F S W W+D ++A +A A D Sbjct: 134 ADYDALAARVAASGIKMVTGKLVADDTWFDSVRLGTDWAWDDEPYYYAAQISALTASPDT 193 Query: 172 NCFSVSLYSAPKPGDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 + + ++ + PGD A S P T + ++ + R + A+ L N Sbjct: 194 DYDAGTVIVSVAPGDAAGKPAKVSTTPETDY--LKIVNRATTGAETDVLIERQHSTNTVL 251 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 +TG + + AV D YA ++ + L + G+ G R+ TV AS+ Sbjct: 252 ITGTVADGYDEW---VAVDDPTGYAASLFRKALAKHGVRVLGPTAREATPAGAATV-ASR 307 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 S PL +LL +K S+NM A+ + + IG + + GTW AG ++ + + Sbjct: 308 DSMPLSELLVPFMKLSNNMHAEILTKSIGR-KVSGAGTWSAGLASLTSFAQANG---MPT 363 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGL 405 + DGSGLSR + + P + +L + + LP+AG G+L+ R + Sbjct: 364 LRMRDGSGLSRADGLTPGGVTGLLLALRSKPWFSTWYGSLPIAGDPDRMVGGTLRSR--M 421 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV----QYLSGYAVEPADQRNR-RI 460 G V AKTGSL GV +L+G++T+A + + F Q+LSG P D ++ I Sbjct: 422 RGTPAAGNVHAKTGSLTGVTSLSGYVTSADNEPLVFSVMLNQFLSG---SPKDIEDKIAI 478 Query: 461 PLVRFESRLYKDI 473 L +F D+ Sbjct: 479 RLAQFSRTAPADV 491 >UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3M3_SALRD Length = 477 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 117/404 (28%), Positives = 178/404 (44%), Gaps = 31/404 (7%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT-----LKR 113 LPAS QK+ T AAL LGP+ R+ TTL G + V++GDL DPT L+R Sbjct: 68 LPASNQKLFTTAAALDLLGPEHRYETTLSFDGTTRDSVMRGDLRLVGSGDPTFGSTALER 127 Query: 114 QD-IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT----QCFSAPPAAAI 168 D +RN L + GV +I+G ++ D F + GW + +T Q Sbjct: 128 TDPLRNWAERLAEMGVRRIEGRLIGDDQAFLNGFYPDGWSVSYLTRQKGQQMGVRAGGLS 187 Query: 169 VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR 228 N V++ A PG +R+ +++ ++ T R NR Sbjct: 188 YRDNTVPVTV-RATTPGTPPEVRIQPEGVLSVKNEAVTSERWRGSTLLINRTF---STNR 243 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP---GT 285 LTG + RS V D ++ I ++ L+ AGI L+ V+ P G Sbjct: 244 IVLTGSV-ARSYGGVRNVPVSDPTAFTLRIFRERLQDAGIETDLELVNAEAVDAPSGGGK 302 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 + S L +++ + K+S+N A+ V R G G+ R G LR +AG Sbjct: 303 PLFVYVSPLLSEIVTEINKRSNNFYAEQVLRTYGWG-----GSTRGGIQRTESFLR-RAG 356 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-YDGSLQYRAG 404 ++ + DGSGLSR NL+ P + +L ++ H F + +P G + +L+ R G Sbjct: 357 INTRPLSLNDGSGLSRKNLVTPRALQALLAHMNDHAAGDVFRASIPRGGERNTTLRTRLG 416 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 Q V AKTGSL V L+G+ G R+AF + + Y Sbjct: 417 RTQ------VRAKTGSLAFVRGLSGYAERPDGGRVAFALFANNY 454 >UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6C9_9NEIS Length = 477 Score = 120 bits (302), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 114/399 (28%), Positives = 184/399 (46%), Gaps = 26/399 (6%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 Y ++Q PAST K++T +AL +L PD+R+ + L + + +GVL+GDL DP Sbjct: 48 YRAEQAVNPASTMKLLTGWSALTRLTPDYRWHSELVSAAPLRHGVLQGDLYWIGSGDPRF 107 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 +D++ M+ TL+ G+ +I G +L+D F+ A + D+ + F P + Sbjct: 108 ANRDLQGMLRTLRARGIERIQGRLLLDKRAFSRIGSASDFG-GDVGRVFMVDPDTHLTGL 166 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV-----VPGDL 226 + ++ D RV P+ L G C+ DV + + Sbjct: 167 KVAWLRFFN-----DGNGARVTLDPPLAGVRLSSALSDGGEGP--CD-DVRRSVSIQVEN 218 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAG---AILKDELKQAGITWSGTLLRQTQVNEP 283 + +++G LP+ + V D YA A L EL G SG R T E Sbjct: 219 EQVSVSGALPRSCDGAQSYVNVLDHDQYAAQAFAALWRELGGRGPAASG---RGTAPPE- 274 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 V+AS S PL L + K S+N +A +F +G T AVR+ L + Sbjct: 275 ARVLASHDSDPLLVALADINKYSNNTMARALFLTLGRVAGGSGDTVADAERAVRETL-AE 333 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 AG+ + +G+GLSR ++ + +VL+ A+ F++ LP+A DG+L+ R Sbjct: 334 AGISAAPLALENGAGLSRQERVSARLLGEVLRSAARGPYAGEFLASLPIAAADGTLKKRF 393 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 A + ++ KTG+L GV LAG+ A G+R+A V Sbjct: 394 ----ANLGPRLRLKTGTLDGVRALAGYWQAADGRRLAIV 428 >UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=4 Tax=Nostocaceae RepID=Q3MFE3_ANAVT Length = 487 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 113/404 (27%), Positives = 177/404 (43%), Gaps = 44/404 (10%) Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 +Q+ PAS K++T AAL QLG DFR T++ N G+ DP+L Sbjct: 81 AQKYFTPASNAKLLTTAAALQQLGADFRIRTSIYENAN-------GNFTIVGRGDPSLSD 133 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 ++ + LK+ G+ QI + DT + + W W D+ + AP + I+++N Sbjct: 134 TQLQALAEQLKQKGITQIRQLIADDTYVQGDIVNS-TWQWEDVQSDYGAPVNSFILNQNV 192 Query: 174 FSVSL------------YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 F + L ++ P G + S VT+ + + Y E Sbjct: 193 FGLKLTPQTVGKTPQLSWNDPNEGRQWLVINKS---VTV---------AANQPSYIE--- 237 Query: 222 VPGDL--NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ 279 V DL + G + S P V D Y L+ A I TL+ + Sbjct: 238 VTRDLTGKVLRIQGQVAANSTPYLAELPVVDPNYYFLRRLRTIFTTAKINLGTTLVASST 297 Query: 280 VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG--HARFNVPGTWRAGSDAVR 337 N+ VA+ QS PL LL + S+N+ A+ + R + R T G D ++ Sbjct: 298 NNQQE--VAAVQSPPLSQLLFETNQNSNNLYAEALLRALAFKQPRVQNKSTANIGLDVIK 355 Query: 338 QILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDG 397 L + GVD ++ D SGLSR NL+ P ++Q LQ IA+ + + LP+AG G Sbjct: 356 VTL-DKLGVDPTGYVLIDASGLSRRNLVTPEALVQTLQGIAKTPAANVYRASLPIAGKSG 414 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 +L R L +G V AKTG+L G +L+G++ + + +AF Sbjct: 415 TLSNR--LRNTPAEGIVQAKTGTLSGAISLSGYVNSPQYEPLAF 456 >UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWZ8_LEPCP Length = 474 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 116/422 (27%), Positives = 192/422 (45%), Gaps = 21/422 (4%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 QLPA +L L + G + + + Q+A PAS K++T+ AAL QLG F++ TTL Sbjct: 42 QLPAD-SLYLWIAPAGGGEARLSHQAGQLAHPASLMKLVTSAAALQQLGRSFQWHTTLHL 100 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 G GVL G L + G DP L + + ++ +++ G+++I G++++D S +A + Sbjct: 101 DGTPRQGVLAGSLHIKGGGDPKLVPERLWLLLRQVQQLGIDEIRGDIVLDRSAYALPEID 160 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 P + + ++ P A +V+ ++ P G + + T VR L Sbjct: 161 PAAFDGEPLKPYNVRPDALLVNYKSITLGFRPDPARGVASVSAEPALAGWTPPDSVR-LS 219 Query: 209 RGSAEAQYCELDVVPGDLNRFTLTGCLP----QRSEPLPLAFAVQDGASYAGAILKDELK 264 G L R+ LTG P +R+ P+ A + ASYA +++ + + Sbjct: 220 DGPCNDWRAGLQADFSSPQRWRLTGSYPLACGERNWPI----AYNEPASYAARVIEAQWR 275 Query: 265 QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 G G +R+ V A+ S PL ++++ M S+N IA + + Sbjct: 276 ALGGRLQGR-VREGLVPAGLPETAAFLSPPLAEVMRDMNLHSNNQIAQQMLLALSP---Q 331 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 +P T+ A V +L G D + +GSGLSR I P + + LQ+ + Sbjct: 332 LPATFEAARQPVANLL-GAVGCDSAELRLDNGSGLSRDERITPRCLGRWLQWSWRQPWMP 390 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + + LPLAG +G+ + V G+ KTGSL V +AG + A GQR V Sbjct: 391 DLLGSLPLAG-EGTAR-----RAFSVAGRAHLKTGSLANVAAIAGVVHGADGQRQVVVAM 444 Query: 445 LS 446 L+ Sbjct: 445 LN 446 >UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=15 Tax=cellular organisms RepID=A1VU15_POLNA Length = 528 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 118/424 (27%), Positives = 202/424 (47%), Gaps = 41/424 (9%) Query: 44 GASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVA 103 G +AP + + + PAS K++T A L LGP + ++T + G + NGVL G+L+ Sbjct: 93 GRAAPLLSWRAGSAMNPASVMKLVTTYAGLELLGPAYTWSTPVYADGPIANGVLSGNLII 152 Query: 104 RFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 + DP L + + ++ ++ G+ I G++L+D S FA+ + PG + + ++ Sbjct: 153 QGRGDPKLVMERLWLLLRRVQGLGIKTITGDILLDRSAFAASTQHPGDFDGEALRPYNVQ 212 Query: 164 PAAAIVDRNCFSVSLYSAPKPGD----------MAFIRVASYYPVTMFSQVRTLPRGSAE 213 P A ++ N SV + AP PG +A +R+ P++ S R G AE Sbjct: 213 PDALLL--NYKSVVMTFAPNPGSGSASISYDPPLAGVRMQPGVPLSAGSNGRA---GLAE 267 Query: 214 AQYCELDVVP--GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 + P D R G P A A D ASYA + ++ G T Sbjct: 268 CGDYRAQLQPDFADPLRMAFAGSYPAACGEKVWAIAYPDPASYAQRAIAGLWQEMGGTLG 327 Query: 272 GTLLRQTQVNEPGTVVA-SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG--T 328 G + + V PG A +SA L ++++ + K S+N++A +F + R PG + Sbjct: 328 GQV--RDGVAPPGLAPAFEMESASLAEIIRDINKFSNNVMAQQLFLTLSLQR---PGGAS 382 Query: 329 WRAGSDAVRQILRQQAGVDIGN-------TIIADGSGLSRHNLIAPATMMQVLQ--YIAQ 379 A +AVR + + G G ++ +GSGLSR + P + ++LQ Y++ Sbjct: 383 NEASREAVRGWWQGRFGAQNGGPGNAPDMPVLDNGSGLSRLERVTPQGLARMLQTAYVSG 442 Query: 380 HDNELNFISMLPLAGYDGSLQY-RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 EL ++ LP++G DG+L+ ++ + Q G K+G+L+ LAG++ T SG+R Sbjct: 443 AMPEL--MASLPISGVDGTLKRSKSQVSQ----GWAHLKSGTLRDATALAGYVHTPSGRR 496 Query: 439 MAFV 442 + V Sbjct: 497 LVVV 500 >UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB97_GEMAT Length = 545 Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 111/438 (25%), Positives = 190/438 (43%), Gaps = 49/438 (11%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 + + + ++ +PAS QK++TA AL LGPDFR+ T + G V GDL+ + DP Sbjct: 94 LSHDADRLFMPASNQKLLTAAIALQHLGPDFRWRTPVLLDGTQRGSVFHGDLLVQGSGDP 153 Query: 110 TLK--------RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 ++ ++ TL+ G+ +I G VL GW W+D +S Sbjct: 154 SISDALRGGRASSAFDAILDTLQARGIKRITGRVLPWGDALPGATTGFGWAWDDFDAGYS 213 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA--SYYPVTMFSQVRTLPRGSAEAQYCEL 219 A + + + + K G +R A YP ++ + R +A + + Sbjct: 214 AAIDELTYNEGELYLHIVAGSKIGSPVTVRRAPTERYPAV---RIEAITRDTATSAVSAI 270 Query: 220 DVVPGDL--------NRFTLTGCLPQ-RSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 P L ++ ++G + Q S + LA+ A A L D L+ I+ Sbjct: 271 APRPMPLSVVYDSIGHQVVVSGTMSQGDSTRVTLAYRHPSDAFLAA--LGDALRARKISV 328 Query: 271 SGTLLRQTQVNEPGTVVASK---------------QSAPLHDLLKIMLKKSDNMIADTVF 315 G ++ + + PG V + +S D+L+ MLK S N +A+ +F Sbjct: 329 QGGVIARPAPHGPGRVASRSTKRAVAHAIDTLGVIESVSFADVLRRMLKPSQNQMAELIF 388 Query: 316 RMIGHARFNVPGTWRAGSDAVRQI-LRQQAGVDIGNTIIA--DGSGLSRHNLIAPATMMQ 372 R G+ + D+ R + R AG I +A DGSGLSRH+ + P +++ Sbjct: 389 RTSGYV-----ASGDGSLDSARAVGTRTLAGWGITGQDVAYRDGSGLSRHDYLTPRAVVR 443 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 VL + + F LP+AG DG++ R + G AKTG+L L+G++T Sbjct: 444 VLDAMHRSPWYAVFRDGLPIAGVDGTIANR--MKDTPAQGNARAKTGTLDKARALSGYVT 501 Query: 433 TASGQRMAFVQYLSGYAV 450 ++ G+ + F + ++V Sbjct: 502 SSDGRLLFFSLLCNNFSV 519 >UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Actinomadura sp. R39 RepID=DAC_ACTSP Length = 538 Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 120/412 (29%), Positives = 185/412 (44%), Gaps = 37/412 (8%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLET------KGNVENGVLKGDLVARFGADPTLK 112 LPAS K+ TA AAL LG D F T + +G V++ L G DPTL Sbjct: 95 LPASNMKLFTAAAALEVLGADHSFGTEVAAESAPGRRGEVQDLYLVGR------GDPTLS 148 Query: 113 RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV--- 169 +D+ M A + SGV + G++ D + F S W D +SA +A V Sbjct: 149 AEDLDAMAAEVAASGVRTVRGDLYADDTWFDSERLVDDWWPEDEPYAYSAQISALTVAHG 208 Query: 170 ---DRNCFSVSLYSAPK--PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG 224 D VS+ A + P D+ Y + ++ T GSA + P Sbjct: 209 ERFDTGVTEVSVTPAAEGEPADVDLGAAEGY--AELDNRAVTGAAGSANTLVIDR---PV 263 Query: 225 DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL-LRQTQVN-E 282 N +TG LP + P+ V + A+ AG + ++ L+ G+T G + L + + Sbjct: 264 GTNTIAVTGSLPADAAPVTALRTVDEPAALAGHLFEEALESNGVTVKGDVGLGGVPADWQ 323 Query: 283 PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 V+A SA L ++L +K S+N A+ + + IG GTW AG V + L Sbjct: 324 DAEVLADHTSAELSEILVPFMKFSNNGHAEMLVKSIGQETAGA-GTWDAGLVGVEEAL-S 381 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-----G 397 GVD ++ DGSGLSR NL+ T++ +L + + LP+AG G Sbjct: 382 GLGVDTAGLVLNDGSGLSRGNLVTADTVVDLLGQAGSAPWAQTWSASLPVAGESDPFVGG 441 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 +L R + +G V AKTG++ GV L+G++ G+ +AF +G++ Sbjct: 442 TLANR--MRGTAAEGVVEAKTGTMSGVSALSGYVPGPEGE-LAFSIVNNGHS 490 >UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=2 Tax=Actinomycetales RepID=C1YFR4_NOCDA Length = 545 Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 124/416 (29%), Positives = 190/416 (45%), Gaps = 35/416 (8%) Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 S + +PAS K+ TA AAL LG D F+T + +G+ + ++ DL G DPTL Sbjct: 95 SGEQLVPASNMKLFTAAAALDVLGADHTFSTEVVAEGHRQRRSVE-DLYLVGGGDPTLSE 153 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV---- 169 QD+ + A + SGV + G+VL D + F S W D +SA +A V Sbjct: 154 QDLDALAADVAASGVRTVRGDVLADDTWFDSQRLVDDWWPEDEPYAYSAQISALTVAHGE 213 Query: 170 --DRNCFSVSLY--SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 D V + +A P + Y + +Q T P G + + P Sbjct: 214 RYDTGVTEVVVTPGAAGAPATVDLGAAEGY--AELDNQAVTGPPGGTSSVVVDR---PVG 268 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE-PG 284 N T+TG +P + P+ V + A AG + L++ G+T G + + E PG Sbjct: 269 TNTITVTGTIPADAAPVTALRTVDEPAGLAGHLFAQALERHGVTVEGGV----EFGEAPG 324 Query: 285 ------TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 +VA +S L ++L +K S+N A+ + + IG G+W AG V + Sbjct: 325 RGRHGARLVADHESPELAEILVPFMKFSNNGHAEMLVKSIGQ-EVAGEGSWDAGLTGVER 383 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-- 396 L GVD + ++ DGSGLSR NL+ T++ +L + LPLAG Sbjct: 384 SL-AGLGVDTSDLVLNDGSGLSRGNLVTSDTVVDLLVSTRDASWHGVWADSLPLAGESDP 442 Query: 397 ---GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT-TASGQRMAFVQYLSGY 448 G+L++R G A G VSAKTG++ G+ L+G++ G +AF +GY Sbjct: 443 FTGGTLRFRMGGTAAA--GVVSAKTGTMTGISALSGYVAGQGGGDGLAFSVVNNGY 496 >UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCL1_ELUMP Length = 496 Score = 118 bits (295), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 109/412 (26%), Positives = 193/412 (46%), Gaps = 33/412 (8%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTL--ETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 P S K+ T AA+ +GP+ +F T + + K N+ G LKG++ + G DP+L I+ Sbjct: 59 PGSLIKLFTTAAAIEYMGPEHKFKTEIYFDGKKNIF-GTLKGNVYIKGGGDPSLGSNRIK 117 Query: 118 N----------MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 + ++ + +IDG+++ D S+F+ ++ P W DM F A A Sbjct: 118 TNPSMEEILDFWASRIESQEIKKIDGDIIADVSLFSGNNLPPKTAWEDMGNYFGATSEAL 177 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYP----VTMFSQVRTLPRGSAEAQYCELDVVP 223 + N F++ P+P ++ + S P +++ S V T P S++ Y + P Sbjct: 178 NFNDNMFTLRF--KPQPQKLSLVEFDSMSPQVERISVKSYVVTDPFSSSDEIY--IFAAP 233 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN-- 281 G G +P ++ + ++ D + K+EL + GI +G R + N Sbjct: 234 GQF-ELIARGTVPIKTTASYVYASLPDPPLFTAQQFKNELLKRGIKITGR-ARVSYGNFN 291 Query: 282 -EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP-GTWRAGSDAVRQI 339 T++AS S L +++ I+ KKS N+ ++ + + I A FN G+ G V Sbjct: 292 YTDKTLLASSYSPALFEIINIINKKSFNLYSEVLLKNI--AVFNTGIGSTEQGIIEVENF 349 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGS 398 LR Q + N I DGSGLSR++ + T++ L+ + + E+ + S+L AG + Sbjct: 350 LRAQNNL-TDNFKIYDGSGLSRNSFVNTKTVITFLENMTKKPYFEIFYNSLLTPAGEEKH 408 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 A + D + KTG L GV + +G+I +G+ + F ++ Y V Sbjct: 409 RLKNAFSNSPAFD--LHMKTGFLTGVRSYSGYIKDCNGKMITFSFIVNNYTV 458 >UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=3 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWR1_DYAFD Length = 492 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 111/432 (25%), Positives = 180/432 (41%), Gaps = 37/432 (8%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 +LA+ ++ V + + ++ AST K+++ L G DF+F T LE G + Sbjct: 47 GSLAVSIKAVKENKNVFSLNHERSLPSASTLKLVSTATVLALFGGDFKFQTFLEHDGIIR 106 Query: 94 NGVLKGDLVARFGADPTL----------KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 L G+L DP+L ++ I VA +K++G+ I G VL D S F Sbjct: 107 GDTLAGNLYIHGTGDPSLGSDRFKGYPTAQEIITRWVAAVKRAGIRYIKGKVLADASFFD 166 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD-MAFIRVASYYPVTMFS 202 A W W DM + A + N + V GD + + P F+ Sbjct: 167 KEAVASTWIWGDMGNYYGAGVQGLNFNENLYRVKFKPGGDVGDPTSVLGTDPAIPYLSFT 226 Query: 203 -QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 QV T RGS + + N LTG +P + + ++ D A YA LK+ Sbjct: 227 NQVTTGERGSGDKTVIYSSPLG---NNVVLTGTVPAGNATFTVKGSIPDPAWYAAYALKN 283 Query: 262 ELKQAGITW------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 L G+ SG TQ P ++ +S PL +L + S N+ AD F Sbjct: 284 ALSGNGVVVAEAAQPSGNAASTTQ--NPKRIIDEYKSPPLRELCQQTNFWSINLFADAFF 341 Query: 316 -----RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 R+ G + F+ T G + R G D+ I DGSGLS I +++ Sbjct: 342 KQSGKRLSGSSGFDDAATAITGYWSGR-------GADLRGFYIKDGSGLSPSGSITASSL 394 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 +L + + +F + + G +G+++ +A G + AK+GS++G AG+ Sbjct: 395 TDILNLANKDVSFKDFYQSIAILGQNGTVRNLGKGSRAA--GNMHAKSGSIEGTRAFAGY 452 Query: 431 ITTASGQRMAFV 442 + SG ++F Sbjct: 453 VNAKSGALLSFT 464 >UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria RepID=A9M1W1_NEIM0 Length = 515 Score = 117 bits (293), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 106/412 (25%), Positives = 184/412 (44%), Gaps = 43/412 (10%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 +A+ VQ++ + ID+ S PAST K++TA AA G ++R+ T ++ G V +G Sbjct: 78 IAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDG 137 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 L G+L DP ++++ + L++ G+ I G++++D S++ +P D Sbjct: 138 TLDGNLYWAGSGDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEV-GSPDDFEAD 196 Query: 156 MTQCFSAPPAAAIV---------DRNCFSVS--LYSAPKPGDMAFIRVASYYPVTMFSQV 204 F PP ++ +RN + L P P A + + Sbjct: 197 SGSPFMTPPNPTMLSAGMVMVRAERNAADSTDILTDPPLPHIFAQNNLKITASQAACPSI 256 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA---FAVQDGASYAGAILKD 261 + L R S N L G +P+ P+ FA+ + +++ Sbjct: 257 KKLMRASFSD------------NTLKLRGNIPESCLGKPVGVRMFALDE-------LIRQ 297 Query: 262 ELKQAGITWSGTL---LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 + G + + + E +A S P+ ++L M K+SDN+IA +VF + Sbjct: 298 SFTNHWLLGGGRISDGIGISDTPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKL 357 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 G +P + AVR+ L +G+D+ + ++ +GSGLSR + M Q+L+ Sbjct: 358 G-GNGKLPAVSEQAASAVRREL-AVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAY 415 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 +FI LP+AG DG+L+ R Q+G G + KTG+L V LAG+ Sbjct: 416 FSPFAQDFIDTLPIAGTDGTLRNR--FKQSG--GLLRLKTGTLNNVRALAGY 463 >UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55728_SYNY3 Length = 486 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 110/414 (26%), Positives = 190/414 (45%), Gaps = 33/414 (7%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A + +Q + S P Y + + +PAS QK+IT AL +LGP+FRFTT + + Sbjct: 62 AQWGIAIQPLTDSQPIYQYQADRFFIPASNQKLITTAMALQELGPNFRFTTQVYQR---- 117 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD-KAPGWP 152 +G K +++ DP+ D+ + LK GV I+ L+DT A D + P W Sbjct: 118 DGGKKVQVIS--SGDPSFDVDDLTAIAKGLKDRGVTAIEELELVDT--IAPQDYQRPSWE 173 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSA 212 W+D+ ++ P AI+ N ++L P ++ ++ +Q + + + Sbjct: 174 WDDLHYGYAPPVNGAILTGNQVILTL----TPQNLGEPLTPTWSDPIAGAQWQIINQTET 229 Query: 213 EA---QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 Q ++ + G + +TG LP E + AV D Y A L+ +L + GI+ Sbjct: 230 AVDPHQPPQVQQIFGQ-RQLVITGGLPPAGETRSITLAVADPQQYFLASLQQKLAEQGIS 288 Query: 270 WSGTLLR-QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT 328 S +++ T+ P ++A S PL L+K + + S+N+ A+ + I Sbjct: 289 VSTSIVSANTKAIAPAPLLALT-SPPLWTLIKTVNQDSNNLYAEALLNAI---------- 337 Query: 329 WRAGSDAVR-QILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 + S A Q ++ G+ + DGSGLSR +L+ P ++Q+L Q + Sbjct: 338 -QPPSQATDWQSYVERLGLATTTVRLRDGSGLSRQDLVTPQALVQLLINQTQKSTGTIYQ 396 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 L +AG G+L+ + GK+ KTG+L GV +L G++ +AF Sbjct: 397 QSLAVAGRSGTLER--SFADTPLVGKMRGKTGTLTGVVSLTGYVENQQWGTVAF 448 >UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX09_9GAMM Length = 536 Score = 117 bits (292), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 203/459 (44%), Gaps = 50/459 (10%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 +++++K+G S P + + + PAS K+ + L +LG D R T L +G ++ G Sbjct: 58 SVLLEKIGDSHPLVAHRPDALLAPASVLKLFSTAYILDRLGADARQCTQLRARG-LDQGT 116 Query: 97 LKGDLVARFGADPTLKRQD----------------IRNMVATLKKSGVNQI-DGNVLIDT 139 L+G LV G DP L + +R + L ++GV ++ DG V +D Sbjct: 117 LQGPLVFVGGGDPNLSSRRFPYTGNSEHEADSLVVLRELAEQLWQAGVRRVPDGIVAVDG 176 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 A PGW +D + AP ++ V + A KPG +A +++ Sbjct: 177 PFPAETGSPPGWTEDDQRFWYGAPIHGLYINDASVLVRVRPAAKPGALATVQITPNPQGF 236 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + + VRT+ + Q E + D + L+G + S L A D +A L Sbjct: 237 IRNAVRTV----GKRQPTEPVRLVTDTTGWRLSGSVRAGSRTLVAGLAQPDPPRFAAITL 292 Query: 260 KDELKQAGITWSGTL------------LRQTQVNEPGTVV-------ASKQSAPLHDLLK 300 + L++ GI SG + L ++ + E +V+ A S PL + ++ Sbjct: 293 AEVLRERGIAVSGDIRVRGLSRNRDAGLEESGIPEQASVLTHARLLLAEHWSPPLAEEIQ 352 Query: 301 IMLKKSDNMIADTVFRM--IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 ++ K S N +T+ R+ I R R+ + A + ++ G+ G T D SG Sbjct: 353 VINKVSQNTHIETLTRLADIAQGRSGT----RSSAVAGLETWARERGLLAGQTRFVDASG 408 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR + ++ + ++++L + Q + + LP AG DG+L++R AG+ + AKT Sbjct: 409 LSRDDRLSASDLVRLLNWATQQPWWPEYAASLPEAGSDGTLRHRFRTLDAGM---LLAKT 465 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 G+L +LAG + Q F ++ +++ A R Sbjct: 466 GTLSDAISLAGILYIKPEQAYVFAILVNDFSLSRAALRG 504 >UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FLH3_SACEN Length = 512 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 122/405 (30%), Positives = 181/405 (44%), Gaps = 26/405 (6%) Query: 52 YHSQQ--MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 Y SQ A PAS K++TA AAL LGPD+RF T + T G VL+GDL R DP Sbjct: 54 YSSQADARATPASNAKLLTAAAALEALGPDYRFRTDVLTDGQQRGPVLQGDLFLRGTGDP 113 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 T+ D + A + +SGV ++ G + D F GW W+D ++AP +A V Sbjct: 114 TMLAADYDRLAAQVAESGVREVKGKLRTDAGAFDDVPLGSGWAWDDEPYYYAAPISALTV 173 Query: 170 DRNC---FSVSLYSAPKPGDMAFIRVASYYPVTMFSQV--RTLPRGSAEAQYCELDVVPG 224 N +L A PG + P T ++ RT A ++ G Sbjct: 174 APNTDFDAGTALVRA-TPGAEGEPAEVALEPATAVLEIDNRTTTSAPGSAPALSVEREHG 232 Query: 225 DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG 284 NR ++G +P + V D A+YAG + L G+ G +T E Sbjct: 233 G-NRVVVSGSVPAGGPVVEDFSTVPDPAAYAGDVFARALAAHGVQVGGVAPGRTP--EGA 289 Query: 285 TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ- 343 +A + S PL DLL +K S+N A+ + + +G ++L ++ Sbjct: 290 RSLAGRDSMPLRDLLVPFMKLSNNGHAEVLVKAMGRQATGT-----GTWGGGIEVLNEKL 344 Query: 344 --AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YD 396 GVD + DGSGLS + + P + +L Q + LP+AG Sbjct: 345 NGLGVDSKVMRMVDGSGLSTMDAVTPRQLALLLDNARQRPWFQVWYDSLPVAGNADRMVG 404 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G+L+ R + G D V AKTGSL GV +L+G++T A+G+ + F Sbjct: 405 GTLRSRM-VGTPGQD-NVHAKTGSLTGVTSLSGYVTAANGRPLVF 447 >UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA56_ACIC5 Length = 518 Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 114/459 (24%), Positives = 194/459 (42%), Gaps = 70/459 (15%) Query: 45 ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVA 103 A AP ++ Q+ PAS K+ T A L + PD R+ T + T G V+ G L GDL+ Sbjct: 39 AGAPVYSLNNAQLFHPASNAKLFTTAAVLGLMSPDARWRTQVVTSGQVDAKGTLHGDLIL 98 Query: 104 RFGADPTLKRQ----------------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 DPTL + + M + K G+++I+G+++ + + F Sbjct: 99 LGSGDPTLSGRVYPYGGHTERASDTLAALEQMADEVVKDGIHRIEGDIIGNDTWFTWQPY 158 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT- 206 GW +D+T + AP +A ++ N +++ P+ +P + + T Sbjct: 159 GAGWAQDDLTWDYGAPISALTLNDNVAYLNI--VPQQEAAQLPNEPGAHPEKLVTPTGTE 216 Query: 207 LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR--------------SEPLPLAFAVQDGA 252 L + Y L+ +L R T + R + L +A A+ D A Sbjct: 217 LAEWNPPTPYYYLNN-ESNLTRATRSYAGIDRRLGSHTVRVFGNIDAHGLHVALAIGDPA 275 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV--VASKQSAPLHDL------------ 298 YA D L++ G+ G + Q++ T S+ PLH + Sbjct: 276 QYAAQTFADLLRERGVQIDGMARAEHQLSTDTTHFRTESELPIPLHRIPDTVLGPPSGNM 335 Query: 299 ---------------LKIMLKKSDNMIADTVFRMIGHARFNV-PGTWRAGSDAVRQILRQ 342 +++ LK S N+ A+ R +G R+ G++ G+ +RQ + Sbjct: 336 HVLASWLSHATLAQDVEVTLKVSQNLHAELYLRDLG--RYEAGEGSFAEGARVIRQ-FAE 392 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 AGV G+ DGSG+S +++ P + +L Y A + LP+ G DG+L R Sbjct: 393 DAGVKPGDFFFYDGSGMSHQDVVTPRALTTMLAYAAHQPWGKLYRESLPVGGVDGTLSDR 452 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G+ +V AKTG+L V +L+G++ T SG+ + F Sbjct: 453 --FVSPGMRNRVDAKTGTLSEVNSLSGYVRTRSGRTLVF 489 >UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=beta proteobacterium KB13 RepID=B6BV24_9PROT Length = 460 Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 31/402 (7%) Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS K++TA AL +LGPDF+F T + ++ L GDL+ + DPTL ++++++ Sbjct: 55 ASVNKLVTATIALDELGPDFKFRTLFFSSKQIKENTLAGDLIIKGEGDPTLSIENLKDIF 114 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW-NDMT-QCFSAPPAAAIVDRNCFSVSL 178 LK G+NQI GNV +D S F P + +D++ + ++ P + +++ + Sbjct: 115 YRLKARGINQITGNVFLDDSYFKLQ---PNREYIDDLSYRAYNVQPKSLLIEAGAIEIQF 171 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCEL-------DVVPGDLN-RFT 230 + S Y + + + CE +V+ D + + + Sbjct: 172 LNQDNN--------VSIYNKPFIEGIEVVNNLKITKEACEDWKSKIQPEVIFTDESMQIS 223 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP---GTVV 287 L G ++ + L D Y + + L + I ++G + +Q +E ++ Sbjct: 224 LNGSFSKKCKNKSLYLNALDQDEYMKVAISNILDEVEIEFAGEIQKQGFADEELNSFVLL 283 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADT--VFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 S PL+ L+ M K S N+ + + M F+ D + ++ G Sbjct: 284 DEHFSDPLNQLMYQMNKYSLNLFSRNLALTAMKQKTEFDAD---EFNVDIYFKSWFEKKG 340 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 + I +G+GLSR + ++L +I + D + IS LP+AG DG+L ++ Sbjct: 341 ISANEFFIENGAGLSRSSHANTFLFQEILVFIEESDWKSEIISSLPIAGIDGTL--KSMF 398 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 + KTG L+ V+ L+GF+ ++ G+ L+G Sbjct: 399 KEKSFSNATHLKTGRLKNVFALSGFMKSSKGEEYIVTFVLNG 440 >UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Nitrosomonas RepID=Q0AJG3_NITEC Length = 475 Score = 115 bits (288), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 104/428 (24%), Positives = 200/428 (46%), Gaps = 26/428 (6%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 T +P A + + V++VGA P + ++ PAS KV+T A L LGP + + T + Sbjct: 35 TGIPEAA-VGIYVREVGAERPLVSVNADVPMNPASVMKVVTTYAGLEMLGPSYTWRTKVY 93 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 GN+ENG L+GDL+ + DP+L ++ ++ L++SG+ I G++++D S ++ + Sbjct: 94 ANGNLENGRLQGDLIIKGYGDPSLNLENFWLLLRQLRQSGLKDISGDLVLDYSYYSFPTE 153 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT- 206 PG + ++ P A +V+ + ++ L+ + G +RV + P + V+ Sbjct: 154 NPGAFDGKRYKTYNVAPEALLVNYHTSTLHLFPESQHGG---VRVTA-DPESQLLNVQNH 209 Query: 207 --LPRGSAEAQYCELDV-----VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 L + +++ PG + L G ++ + ++Y + Sbjct: 210 LKLTQKKCSTSGVRVNIRDDVPRPGHVT-VMLEGDYSAHCGQTAYYLSLHESSTYIHQLF 268 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 KQ T++G+ +R ++ ++ S PL ++++ + K S+N+ A +F +G Sbjct: 269 SGLWKQLDGTFNGS-VRHGVTSKTLNPISVYHSPPLAEVIRGINKFSNNVAAKQLFLSLG 327 Query: 320 H-----ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 F P R+G +RQ L + +D ++ +GSGLSR I+ + +L Sbjct: 328 ETESNGGEFVSPNLARSG---IRQWLFSK-NMDFPELVLENGSGLSRIERISARHLNDLL 383 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 F++ L + G DG+ + R L ++ V K KTG+L+ V +AG++ Sbjct: 384 NAAYFSPTMPEFMASLAVVGVDGTARKR--LKKSVVAQKAHIKTGTLKDVSAIAGYVLNH 441 Query: 435 SGQRMAFV 442 +R V Sbjct: 442 KKKRYVIV 449 >UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=23 Tax=Pseudomonadaceae RepID=Q4ZUL8_PSEU2 Length = 488 Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 53/450 (11%) Query: 28 TQLPAGANLALMVQKVGASA-------------PAIDYHSQQMALPASTQKVITALAALI 74 T LP AL K+G A P + +++ PAST K+IT AAL Sbjct: 28 TTLPPKVQQALKASKLGDDALSLVMLPLNGPGTPTV-FNADVSVNPASTMKLITTYAALE 86 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 LGP ++ T T G + NGVL+G+L + G DP L + + ++ L+ +GV Q+ G+ Sbjct: 87 MLGPTHQWKTEFFTDGTLSNGVLRGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGD 146 Query: 135 VLIDTSIFASHDKAPGWP-----WNDMTQCFSAPPAAAIVD--------RNCFSVSLYSA 181 +++D S F P P ND + F P A +V+ RN L S Sbjct: 147 LVLDRSHFVQ----PQLPVFNDDGNDDNKPFLVKPDALMVNLKALRFVTRNDDGRILVSV 202 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 P +A IR+ + + Q + + +Y + G +N T+TG L Sbjct: 203 EPP--IASIRIDNQVKASASKQC------TGDVRYNPVTQADGSVN-VTVTGQLGNGCNS 253 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE-PGT--VVASKQSAPLHDL 298 ++ D +YA ++ ++ G GT+ + +V PG ++A S L ++ Sbjct: 254 -QTYLSLLDHPTYAAGAVRAIWQELG----GTIQGKDRVGVLPGNAKLLAKAFSPDLVEV 308 Query: 299 LKIMLKKSDNMIADTVFRMIGHA-RFNVPG-TWRAGSDAVRQILRQQAGVDIGNTIIADG 356 ++ + K S+N +A +F +G R G +A +RQ L ++ G+ + ++ +G Sbjct: 309 IRDINKFSNNTMAQQLFLSLGEEFRNEADGDDGKAAQRVIRQWLAKK-GITAPHLVMENG 367 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR ++ M +LQ + F+S +PLAG DG+++ R L + + G+ Sbjct: 368 SGLSRAERVSAREMAVILQAAWRSPYAAEFMSSMPLAGLDGTMRKR--LKRTPLLGEAHI 425 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 KTG+L V +AGF ++G A V L+ Sbjct: 426 KTGTLNTVRAIAGFSRDSNGNTWAVVAILN 455 >UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Cyanobacteria RepID=Q10X51_TRIEI Length = 487 Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 107/410 (26%), Positives = 193/410 (47%), Gaps = 29/410 (7%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K++T A L +L P+FR T++ G KG++ DP+L ++++ Sbjct: 79 PASTAKLLTTAAVLKELKPNFRIRTSIYGDG-------KGNIYIVGRGDPSLAETQLKSL 131 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 LK+ G+ I+ ++ D + F W W D+ + AP + I ++N ++ L Sbjct: 132 AEQLKEGGIENIN-QLISDDTYFQGMAVNSNWEWEDVQAGYGAPINSLIFNQN--AIDLV 188 Query: 180 SAPK----PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 +P+ P + F+ A + + T+ E D + + ++G L Sbjct: 189 LSPQGNGQPLKVTFVNPAESKKWQIENNSVTVATNKKEFVEVGRDFIQPIIR---ISGQL 245 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV--NEPGTVVASKQSA 293 S P+ AV + A + L+ GI+ S +++ +Q+ N T +A +S Sbjct: 246 RIGSASEPVYVAVVEPADNFLNNFRRVLELEGISVS-RIVKSSQITSNLNLTELAFVESP 304 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG------TWRAGSDAVRQILRQQAGVD 347 + +L++ + KKS+N+ A+ + R +G VP T + V+ IL + GV Sbjct: 305 TVGELIEEVNKKSNNVYAEALLRQLGVRSKLVPNKKSDYQTLAKSLEEVKVIL-TRLGVT 363 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 + + DGSGLSRHNL++P ++Q L+ +A + + LP+AG G+L R Sbjct: 364 PNSFRLNDGSGLSRHNLVSPEALVQTLRIMANSPWANAYRNSLPIAGVSGTLSRR--FIN 421 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 + G + AKTG++ GV LAG++ + + + F ++ +E RN Sbjct: 422 SFATGNIQAKTGTISGVSGLAGYVQPINFEPLVFSVIVNQSDLETKYLRN 471 >UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Nostocaceae RepID=UPI0001C16732 Length = 504 Score = 114 bits (285), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 106/420 (25%), Positives = 197/420 (46%), Gaps = 37/420 (8%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 ++++ + + +Q+ +PAST K++TA AA +LG DFR T++ +G+ N Sbjct: 77 GILIKNLSSDQILYSRDAQKYFIPASTTKILTAAAAWQKLGKDFRIRTSIH-QGDEGNFY 135 Query: 97 LKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM 156 L G DP+ + + L++ G+ I+ +++D S F W W D+ Sbjct: 136 LVGR------GDPSFNNAQLTALAQKLQQRGIRSIN-KLIVDDSYFQGEYIDASWQWEDI 188 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 + AP + +V+ N ++L S K G+ I ++ + + ++ E+++ Sbjct: 189 QADYGAPVNSLMVNENTGILTL-SPNKIGEKLNITWSNDMELYSGIENNSITVAENESRF 247 Query: 217 CELDVVPGDLN--RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS--G 272 + V DL + G LP S + +V D + + LK +TW+ G Sbjct: 248 FQ---VTRDLKGQVLKIDGKLPINSPSQTIGLSVIDP-------IDNFLKNLRLTWAKVG 297 Query: 273 TLLRQTQ---------VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 +++ Q + E +A +S L DLLK + + S+N+ A+++ R +G++ Sbjct: 298 INVKEIQPIFEYQHYKIAEQKPEIAVVESLTLPDLLKEVNRNSNNLYAESLLRHLGNSES 357 Query: 324 NVPG--TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 T G ++ L + G++ +I DGSGLSR NLI+P +++ LQ +A+ Sbjct: 358 TNKNETTVNQGLKILKTTL-SEWGIEPNTYMIVDGSGLSRKNLISPEALVKTLQVMAKSP 416 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + F + L G +G+L+ R + G V KTGS+ GV +L+G+I + + F Sbjct: 417 DGNLFRASLATGGMNGTLKNR--FLKTPAWGIVQGKTGSMTGVISLSGYINVPNYDDLVF 474 >UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV28_CYAP4 Length = 490 Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 107/384 (27%), Positives = 181/384 (47%), Gaps = 19/384 (4%) Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 Q +PAS K+ T AAL+++G FR+ T +G+ G +L DPTLK+ D Sbjct: 75 QYFIPASNVKLFTTAAALLRMGAKFRWITPFYARGS---GATLAELRVVGQGDPTLKQTD 131 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + + A L + GV +I + D S+ + P W W D+ + P + IVD N Sbjct: 132 LEQVAADLHRQGVRRIRQLQVEDRSLDTTGIN-PTWEWGDLQSANAVPVSRLIVDENTIG 190 Query: 176 VSLY--SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR--FTL 231 ++L + +P + F+ + + +Q RT+ E ++ E V DL R + Sbjct: 191 LNLLPQAIGQPLQVQFVDPEAAAQWQVVNQSRTV--TGQEPEWIE---VQRDLIRPILRV 245 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV--VAS 289 TG L S P P AV + + + L+ L++ GI +++ + + + +A Sbjct: 246 TGQLRVGSTPEPAFVAVLEPSRHFLTKLQAALRKQGIKVDQAIVQASPSEDKQNLYRIAH 305 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFR-MIGHARFNV-PGTWRAGSDAVRQILRQQAGVD 347 S PL +++ + S+N+ A+ + ++ A V P T A + Q GVD Sbjct: 306 LSSPPLAEVIATTNQDSNNLYAEALLESLLAQAGGTVSPPTPEADPLTILQSTLATVGVD 365 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 + DGSGLSR NL+ P +++Q+L+ + F + L +AG G+L R L Sbjct: 366 PQAYQLQDGSGLSRRNLVTPTSLIQLLEGMHAFPQADIFRASLAVAGQTGTLAQR--LRG 423 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFI 431 GK+ KTG+L V +L+G++ Sbjct: 424 TVGAGKLQGKTGTLSAVVSLSGYL 447 >UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH3_METPP Length = 514 Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 128/460 (27%), Positives = 212/460 (46%), Gaps = 66/460 (14%) Query: 29 QLPAGANLALMVQKVGASAPAI----DYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 QLPA A +A +++ P + +QQ PAS K+ T AL LGP + + T Sbjct: 47 QLPADALVAYIIELGPPGPPRGLPRLTHRAQQPVNPASLMKLYTTGVALELLGPAWTWPT 106 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 + T G V +GVL+GDL+ + DPTL + + ++ +++ G+++I G++++D S F Sbjct: 107 PVLTTGQVVDGVLQGDLILQGRGDPTLVIERLWLLLREVRQRGIHEIRGDIVLDGSAFML 166 Query: 145 HDKAPGWPWN---DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG----------DMAFIR 191 + G P + + + ++ P A ++ N SV+L P+P ++A ++ Sbjct: 167 NGADAGDPADFDGERFRPYNVRPDALLL--NHKSVTLRFVPEPSRGVARVSTDVNLAGVQ 224 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR--SEPLPLAFAVQ 249 + S P M S RGS + + D R LTG P + P+A+A Sbjct: 225 IDSAVP--MVSGPCGDWRGSLKPAF-------DDPGRIRLTGLYPVSCGEKTWPVAYA-- 273 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA----SKQSAPLHDLLKIMLKK 305 + SY ++ + + G +G++ N P V A S PL +++ + K Sbjct: 274 EPGSYNVRLIAEAWHEVGGQLAGSVR-----NGPAPVAAQPLFEATSPPLAAVVRDINKF 328 Query: 306 SDNMIADTVFRMIG-----------------HARFNVPGTWRAG--SDAVRQILRQQ--- 343 S+N++A +F +G + P T AG +DA R+++R Q Sbjct: 329 SNNVMAQQLFLSLGLIPAGTLPLPASATTVATGEVSTPQT-PAGNTADAAREMVRAQVRS 387 Query: 344 -AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 AG G I +GSGLSR + + + LQ + +S LPL G DG+ + R Sbjct: 388 RAGCTDGEFSIDNGSGLSRQSRSSARCLGAWLQALWASPVMPELMSSLPLTGIDGTAR-R 446 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 G + G+ KTGSL+ LAG++ SG+R AFV Sbjct: 447 PGRNWGAALGRAHLKTGSLRDAMGLAGYVLGQSGRRYAFV 486 >UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIE9_9SPHI Length = 514 Score = 112 bits (281), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 113/430 (26%), Positives = 192/430 (44%), Gaps = 33/430 (7%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 +AL V++V S I Y+++Q AST K+IT A L P+F +TTTLE G + + Sbjct: 62 VALSVRRVRDSKELIGYNARQSLPSASTLKLITTATAFAVLNPNFSYTTTLEYDGTISDS 121 Query: 96 VLKGDLVARFGADPTLKRQD----------IRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 VL G+L R DP+L +++ ++K +G+ +I G V+ D S++ Sbjct: 122 VLTGNLYIRGTGDPSLGSWRFSGYYDLTALLKSWSESVKNAGIRRIQGTVVGDASLYDDL 181 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD-----MAFIRVASYYPVTM 200 WP+ D+ + A +A ++ N + V +PG +R P Sbjct: 182 TTPDTWPFGDLGNYYGASLSALNINENLYRVFF----RPGKSIGMPTTVLRTDPLVPYLN 237 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP--QRSEPLPLAFAVQDGASYAGAI 258 F T + Q + P LN+ LTG +P + + + ++ D A +A Sbjct: 238 FRNTVTTDAANTGDQ-VNIYGAP-FLNQQWLTGKVPLGEPANEFSVKGSLPDPAYFAAYS 295 Query: 259 LKDELKQAGITWS------GTLLRQTQVNEPGTVVASKQSAP-LHDLLKIMLKKSDNMIA 311 L+++L + IT S G L T + VV ++ +P L +L + +S N+ A Sbjct: 296 LQNQLIRDNITVSSPPISLGGGLPATVSSTGKRVVLNQHKSPLLTELAQQTNFQSINLYA 355 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + + R + A DA+ + + GV + I DGSGLS + M Sbjct: 356 EALLRTTAITLDKSVRSTAASIDALTTYWKSK-GVLMDGFRIRDGSGLSTVGALTADNMT 414 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 +L + + F +P+ G G+++ A G + AK+GS++GV AG+ Sbjct: 415 GILSTMGREKAFPPFYETIPIIGQTGTVRNLA--RGTAAAGNIRAKSGSIEGVRAYAGYF 472 Query: 432 TTASGQRMAF 441 T A G++M+F Sbjct: 473 TAADGEQMSF 482 >UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87CD0 Length = 464 Score = 112 bits (280), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 101/430 (23%), Positives = 181/430 (42%), Gaps = 26/430 (6%) Query: 34 ANLALMVQKV-GASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 AN +Q + + I +++++ AS K+ T AL LGP +++ + G V Sbjct: 39 ANYGFAIQNLSNKTKKPITHNAEKSFNTASLVKIFTTYIALKDLGPSYKWRSEFLYTGKV 98 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 + +LKGDL+ R D + D+ M+ +++ G+ +I GN+++D S F K + Sbjct: 99 DKDILKGDLIFRGTGDASFSIADLEKMIREVQRLGIKKITGNLVLDYSFFGVMPKDINFD 158 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSL---------YSAPKPGDMAFIRVASYYPVTMFSQ 203 N + ++ P+ + N + S P + I + Sbjct: 159 DNPY-RAYNVLPSPISLQSNTINFKFNIDKNIIKIISEPNLSQLKII-----------NN 206 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 ++ R A + L V D G R + A+ D + Y KD Sbjct: 207 LKKTNRSCANWK-SSLGVDKIDSETIEFKGSFSDRCVGKEIDLALLDNSVYFHENFKDIW 265 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 ++ G +SG + + + V+++ S P+ +L++ + K S N++A + I Sbjct: 266 QRNGGLYSGIMKKNFEEPTNAIVISTHHSKPVSELIRDINKFSLNLMARNLMLTIIKEVT 325 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 T +D V L Q+ + N + +G+GLSR I+P ++Q+LQ I Sbjct: 326 GERPTEDMVNDYVNNWLSQKE-MTFENFYVDNGAGLSRDIKISPNQLLQILQKIYNDPLM 384 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 I+ P+A DG+L+ R + K KTGSL+ V +AGF G +FV Sbjct: 385 PEIIASFPIASIDGTLRDR--MQSKKFKQKGHFKTGSLKDVVGIAGFFLNNDGDMHSFVF 442 Query: 444 YLSGYAVEPA 453 ++G + A Sbjct: 443 IMNGKNAKKA 452 >UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 family n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWP7_DICNV Length = 460 Score = 110 bits (276), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 111/447 (24%), Positives = 204/447 (45%), Gaps = 24/447 (5%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 IA + A VD A +++++VQ V + P ++ + + PAST K++T A Sbjct: 6 AIAQQIPVAIVDLLNKHHLAQEDVSVVVQNVRNTVPLVNLNDTTLRAPASTAKLLTTAAG 65 Query: 73 LIQLGPDFRFTTTLET-KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 LI++ D+R+ T K NGV +G+L + G DP L + + M+ L+ G+ I Sbjct: 66 LIRMSADYRWQTEFYLDKLPDANGVSQGNLYIKGGGDPFLVEEQLTQMLQALRDQGLRHI 125 Query: 132 DGNVLIDTSIF----ASHDKAP--GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG 185 GN+++D S++ D A G P + ++A P +V+ V + P+ G Sbjct: 126 TGNIVLDMSLYQLPPEERDAAAFDGHPLS----AYNAIPNPLMVNFRTIKVQI--VPQ-G 178 Query: 186 DMA--FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN---RFTLTGCLPQRSE 240 D A + + T+ +Q+ T+ S + Y + + N R ++G Sbjct: 179 DRAVRLLLSPNIANWTIENQL-TISNKSCQKNYAPNVALIREENGFARLQVSGAYSTACG 237 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 L A+ + + + Q G ++ G+ T V + + + S PL + ++ Sbjct: 238 ACELTLALGEASEQFYYLFYQIWHQLGGSFDGSGTIAT-VPKTAKIYYTGLSLPLAEQIQ 296 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M + S+N++ + +G + P +G AV + LR Q GV + + II +GSGLS Sbjct: 297 KMNQLSNNVMTRQLMLTLGAFAYGQPANLESGRRAVLETLR-QFGVPLEHAIIDNGSGLS 355 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R ++ + +L + + FIS L +AG+ G+L+ R + G++ KTG+ Sbjct: 356 RQTRVSAGDLATLLFKMYHSEYADTFISSLAVAGHSGTLKKR--FRGEKLAGRIYGKTGT 413 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSG 447 + V + AG++ +G V +G Sbjct: 414 IDEVRSFAGYLLAENGNTYIVVIITNG 440 >UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X6E6_FLAB3 Length = 475 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/425 (24%), Positives = 180/425 (42%), Gaps = 67/425 (15%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 +Y+ Q ASTQK+ TA AAL LG ++++TTT G + NG L +L + DPT Sbjct: 74 EYNGNQGLSTASTQKIFTAAAALETLGTNYQYTTTASYSGTISNGNLSENLYIQSNGDPT 133 Query: 111 L--------KRQDIRN-MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L K ++ RN ++ L++ G+ ++ G+++ID S F GWPWND+ + Sbjct: 134 LGSWRYDGYKPENFRNKLIEALRQKGIRKVSGDLVIDDSYFNFQTVPGGWPWNDIGNYYG 193 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ------ 215 A N F +++ G + ++ V L G + Q Sbjct: 194 AGVWGVNWRENQFDLNMNGKEMKGQNVDLPNVAW--------VNDLKTGGSSDQSLIYTA 245 Query: 216 -YCELDVVPGDL--NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 + ++ + G L T++G P + PL L G +K +AGI ++G Sbjct: 246 PFSDVAYISGTLPAKNITVSGATP--NPPLTL-----------GMEIKTWFNEAGIEFNG 292 Query: 273 --TLLRQTQVNEPGTVVASK-------QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 T Q+N VA K +S L ++ ++KS N +T+ + +G + Sbjct: 293 KVTTASMQQINGEKIPVAPKSNIILEHKSPTLDKIVYWFMRKSVNFYGETLIKTLGKEKK 352 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 N G++ AG +++ + + G+ ADGSGLS N ++ +Q L + + Sbjct: 353 N-EGSFDAGIAYLKEFWKGK-GISPAMINFADGSGLSPQNYVSARAEVQSLLWSRKQPWF 410 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 F P + K+G+++ + AG+ T+ G++ F Sbjct: 411 NAFFEGFPTQ-----------------TNSMKMKSGTMKDTKSFAGYHTSKDGKKYVFAI 453 Query: 444 YLSGY 448 ++ Y Sbjct: 454 IINNY 458 >UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cyanothece RepID=B7JUC0_CYAP8 Length = 501 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 20/409 (4%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 ++VQ + + + LPAS K++T AAL + G +FRF T + GN + Sbjct: 78 GILVQTLESGDMLYALEKDKYFLPASNVKLLTTAAALFKFGSEFRFKTPIYISGNFPH-- 135 Query: 97 LKG-DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 LK LV + DP+L + ++N+ LK GV QID +++I+ P W W D Sbjct: 136 LKTLRLVGK--GDPSLTTEKLQNLAKLLKLRGVTQID-HLIIEAENIDESGINPTWEWED 192 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 + ++ I++ N +++L +P + + + + Q T +G+ Sbjct: 193 VHYNYATAVNDLILNENSVTLTLVPQKIGEPLKLEWSDPIAAEQWQVNHQAITGKKGTPY 252 Query: 214 AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT 273 + E + LN + G L SEP AV + +Y LK L + GI + Sbjct: 253 SIAIETKLGQPILN---IKGELAIDSEPDQFGLAVVNPNAYFLETLKTILIREGIGVNSA 309 Query: 274 LLRQTQVN-EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAG 332 + Q + + + +S L L+ + + S N+ A+++ +++ + R N ++ Sbjct: 310 TINQLKKDSNDDKKMTELESENLDKLVTKVNQDSHNLFAESLLKLLANDRMN-----KSN 364 Query: 333 SDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL 392 + + + L Q GV+ + + DGSGLSR NL+ P ++ L+ +A+ + + L + Sbjct: 365 LEGLNETLTQ-LGVNPISYQLKDGSGLSRQNLVTPEALVSTLRLMAKTPDAKTYQQSLAI 423 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G +G+L+ R + G V AKTG+L G L+G++ + + F Sbjct: 424 GGVNGTLKNR--FQGTPIQGIVQAKTGTLLGTSTLSGYLQPPNYPELVF 470 >UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces RepID=Q9Z541_STRCO Length = 451 Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 131/447 (29%), Positives = 189/447 (42%), Gaps = 101/447 (22%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 N+DE + G +++ +V + D++ +PAS K+ TA AL LG + Sbjct: 81 NLDERLADERLGTDVSGVVLDADSDTALWDHNGSTALMPASNAKLATATTALTLLGANHE 140 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT----LKKSGVNQIDGNVLI 137 FTT + +G L G D TL +D+ + T L+ +G + D V + Sbjct: 141 FTTKVVYG--------EGTLTLVGGGDRTLTGEDVAELARTAADGLRAAG--RTDVQVRV 190 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP 197 D S+FA A G WN+ YYP Sbjct: 191 DDSLFADPSLAEG--WNE--------------------------------------GYYP 210 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 T + VR+L VV G AVQD + AG Sbjct: 211 -TEVAPVRSL-------------VVDG---------------------AAVQDTSIDAGK 235 Query: 258 ILKDELKQAGITWSGTLLRQT--QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 + +L GIT +G + RQT Q + P VA +SAPL D++K MLK SDN IA+T+ Sbjct: 236 VFAKKLAAQGITVTGEVGRQTAKQSDVP---VAQHKSAPLSDIVKKMLKTSDNNIAETLL 292 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 RM PGT+ AG+ VRQ+L G+ + N + DGSGLSR + I AT+ Q+L Sbjct: 293 RMTA-VELGKPGTFEAGTALVRQVLSSY-GISLDNFEMHDGSGLSRADRIPAATLAQLLD 350 Query: 376 YIAQHDNELNFISMLPLAGYDG-SLQYRAGL----HQAGVDGKVSAKTGSLQGVYNLAGF 430 I + + + LP++G G SL G + GKV AKTG+L G L+G Sbjct: 351 AITESPALGSILEGLPVSGEAGASLGPEWGRFDDPNSECAVGKVHAKTGTLTGAIALSGV 410 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRN 457 T G F + +P+D ++ Sbjct: 411 TRTDDGDWRIFSFIENNSTADPSDIKD 437 >UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHU7_9SPHN Length = 480 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 118/442 (26%), Positives = 202/442 (45%), Gaps = 40/442 (9%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A +++ + Q P G L+V + AP + + +PAS K+ T A L Sbjct: 28 AGIEQQLEQGPEGTRYGLLVATLDG-APVLAIAPDERFIPASNTKIFTTATAYADLPALD 86 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 R + + N +L+G AR + P + + + D V+ D S Sbjct: 87 RAAQGTGVRIDQGNVILEGRGDARLSSAPDCTVDCLATLADAIAARTRRVRD--VVGDDS 144 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF---IRVASYYP 197 + PG WN++ + +A +D N + ++ PG + ++ + YY Sbjct: 145 WYPDERWGPGMSWNNIQSRYGTGISALTLDDNHLTATI----APGTIGAPPAVQASGYY- 199 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVP-GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 T+ +++ T+P G EA D P G L R LTG + + P L F+V D A YA Sbjct: 200 -TIDNRIVTVP-GKGEAIVA--DRAPNGRLVR--LTGTIGADASPETLHFSVDDPAHYAA 253 Query: 257 AILKDELKQAGITWSGTLLRQTQVNEPG-----------------TVVASKQSAPLHDLL 299 L+D L G+ +G + + + P +++A + PL D + Sbjct: 254 WRLRDLLVARGVIVTGDIRTRHRSLSPADDPAIRGGAPAARPPAASLLAQLPALPLADDM 313 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 +I+ K+S N+ AD + R + AR G+ G A+ +++ QAGV+ + ADGSG+ Sbjct: 314 RIINKQSQNLHADLMLRRV--ARAQGSGSIADGQAALDRLM-GQAGVNKASYSFADGSGM 370 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 S +N ++P + +L +IA+ + LP+AG DG+L+ R ++GK+ AKTG Sbjct: 371 SSYNRVSPRAAVTLLAWIARQPWGAAWRDTLPIAGQDGTLRNR--FKGTVLEGKLFAKTG 428 Query: 420 SLQGVYNLAGFITTASGQRMAF 441 SL L+G++ T SG+ + F Sbjct: 429 SLNASRALSGYLITRSGRTLVF 450 >UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN1_FIBSS Length = 715 Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 112/478 (23%), Positives = 205/478 (42%), Gaps = 37/478 (7%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 V A+ Y+ L G+ + ++ V + + ++ PAST K +T AA+ L Sbjct: 22 VNVASYKSYVDSLLPGSRFGMSLRSVKMGKEIGNVNGNELFTPASTLKTLTTAAAIHLLP 81 Query: 78 PDFRFTTTLETKGNV--ENGVLKGDLVARFGADPTLKRQD-------IRNMVATLKKSGV 128 D+ T + G++ + L G L R DP + + + NM +L+ GV Sbjct: 82 LDYEPKTEMTVFGDINKKKRTLTGTLKVRGEGDPNISARYYDDPFYILNNMADSLRAMGV 141 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 + I G + +DTS + KA W N + A + NC ++ + GD A Sbjct: 142 DTIVGQIDLDTSYYTGPWKAENWRRNYYDSWYGAEIGPLGFNDNCVTIRFWPGYFIGDTA 201 Query: 189 FIRV---ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 + + Y V + + ++T+ +G+ + +D D + TL G + + + + Sbjct: 202 VVSIQPDVGY--VKVVNNLKTV-KGTKKKWVYGID---PDKSIITLGGTIGEDIDSASMV 255 Query: 246 FAVQDGASYAGAILKDELKQAGITWS--GTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 +++ Y A LK GI + T+ T++ + S +APL +L + Sbjct: 256 LPIRNPIGYFRAAFMYALKDRGIVFKEDATIASNTELKK-----FSYSAAPLLSILDEIN 310 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 ++S N A+T+ R +G A+ G+ G A R+ L Q G+ + + DGSGLS N Sbjct: 311 QRSQNFHAETLLRNLG-AQIAGEGSVEGGRKAERRFL-QDMGLKASDFEVFDGSGLSPEN 368 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 + P+T+ ++L +A+H +I+ G + + KTG + Sbjct: 369 KVKPSTVARLLAKMARHPKGAYYINSFASPGVGSGAKRMIDFEAPWL---TRFKTGYIAE 425 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI------PLVRFESRLYKDIYQ 475 V+ L G+I T G + YL+G P D +++ + L+ + + YK + Q Sbjct: 426 VHGLVGYIYTVDGDTLTAAMYLNGTNTNP-DYKSKDVLDTLWMRLISYTNNNYKSLLQ 482 >UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5 Tax=Bordetella RepID=Q2KWB6_BORA1 Length = 483 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 113/434 (26%), Positives = 201/434 (46%), Gaps = 33/434 (7%) Query: 28 TQLPAGANLALMVQKV-GASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 T+LP A L+++VQ+V G AI+ + + PAS K++T AL +LGP++ + T Sbjct: 47 TKLPDEA-LSVVVQEVNGPRMLAINAQTPRN--PASVMKLVTTWVALSELGPNYSWRTDF 103 Query: 87 ETKGNVE---NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 T V G L G L R G DP QD+ ++ L+ GV +I ++++D SIF Sbjct: 104 LTDPGVRPDAQGRLNGPLYWRAGGDPQFMLQDLWTLLRDLRLRGVKEIS-DLVVDRSIFG 162 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ 203 PG + ++A P A +V ++ L P P VA + T+ Sbjct: 163 QVAIDPGAFDGAPDRAYNASPDALMV--GFGALRLLVTPDP-------VARKWVATVDPP 213 Query: 204 VRTLPRGSAEAQYCELD-----------VVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 V L R Q+ + VV + L+G + L Sbjct: 214 VSGL-RLEGAIQWTDARCPGAPAVSTQPVVTQEGVSLRLSGAVAGSCGEFSLYRLALSQP 272 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 Y A+ + ++ G T+ G + R V V+AS +S L + ++++ K+S+N++A Sbjct: 273 EYTDAVFRLLWRELGGTFKGKM-RPGVVPGDAIVLASHESPTLGEAIRVINKRSNNVMAR 331 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 T+ +G R P T + +Q+L Q G+++ ++ +G+GLSR ++ ++ Sbjct: 332 TLLLTLGAERGRRPATVASSESVAKQLLSGQ-GLNMPELVLDNGAGLSRDARVSADSLAA 390 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 +L + +++ + +AG DG+++ R + G G KTGSL+ V ++AG++ Sbjct: 391 MLSLAWRSPVMPEYLASMAIAGVDGTVRRR--MQGKGALGMAHLKTGSLRDVRSIAGYVL 448 Query: 433 TASGQRMAFVQYLS 446 SG+R V ++ Sbjct: 449 GNSGKRYVVVSMVN 462 >UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XIE9_SYNP2 Length = 479 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 93/378 (24%), Positives = 171/378 (45%), Gaps = 27/378 (7%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 +PAS QK++T AAL+ GP++++ T + T G N L+ R DP+L + + Sbjct: 78 VPASNQKLLTTAAALVSFGPNYQYQTPIYTVGTAPN---LEKLIIRGVGDPSLTTEKLTT 134 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 ++ L + ++ ID V++D+S F P W W+D++ + P + +++ N +++ Sbjct: 135 ALSQLSQQQIHHID-QVILDSSHFPEPGVNPTWEWSDLSFYYGVPVTSLMLNENAVVLTV 193 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 + + G + + + + + Y TLTG L Sbjct: 194 FPT-ESGQTTTVGWSDDIAAQQWQLENQMVTAPDDTPYSGSLTQTYGTTTLTLTGKLAAD 252 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV-----NEPGTVVASKQSA 293 + P ++ D YA + L + GIT +L QT + +P +AS Sbjct: 253 AMPDIWGLSIPDPDRYALDKITQILGEQGITVGKSLTTQTPIPNLDQAQPLGAIASD--- 309 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL ++LK + S+N+ A+++ + + +D + + + GVD + Sbjct: 310 PLAEILKTTNQDSNNLFAESLLKTL------------TAADRDPETILESIGVDPATYRL 357 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DGSGLSRHNL+ P ++Q L + H + + L +AG G+LQ R V+ + Sbjct: 358 RDGSGLSRHNLVTPMALIQTLDGMLTHPQGETYRNSLAIAGRTGTLQNR--FQDTPVENQ 415 Query: 414 VSAKTGSLQGVYNLAGFI 431 KTG++ V L+G++ Sbjct: 416 FFGKTGTMTHVSALSGYL 433 >UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AVY5_9CHRO Length = 492 Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 99/396 (25%), Positives = 182/396 (45%), Gaps = 28/396 (7%) Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 Q+ + AS K++T AAL +LG DFR T++ G LK DL DP+L Sbjct: 86 EQKYFVAASNVKLLTTAAALRELGADFRIRTSVYAVGKPPR--LK-DLRVVGRGDPSLTT 142 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 ++ + LK+ G+ I+ +++D S F P W W+D+ + + I++ N Sbjct: 143 AQLKLLAQQLKQKGIRYIE-QLIVDDSYFKELPLNPSWEWSDLVFNIAPSVNSLILNENA 201 Query: 174 FSVSLY--SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA-----QYCELDVVPGDL 226 ++ L +P + ++ + + ++ T P+G+ + +LD Sbjct: 202 ATIKLIPQQVDEPTQLEWLDSVAARQWQVENESITGPKGTKNTIDFNRSFTQLD------ 255 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGT 285 +TG L E A+ D A Y + L + GI + T+++ + E G Sbjct: 256 --LKITGQLAVDQEADTTTIAIPDPARYFLESFRQVLLEEGIEINQATIVKDSSAAEEGK 313 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 +A +S PL L+ +S+N+ A+ + +++ + +A D ++Q L G Sbjct: 314 ELAFVESPPLIMLVDKANTESNNLYAEAIAKILATQSRD-----KAAVDVIKQSLID-LG 367 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 V+ + + DGSGLSR NL++P +++ L+ +A+ + + L + G+LQ R Sbjct: 368 VEADSFKLVDGSGLSRQNLVSPEAIVETLELMAESLQGEIYRNSLAVGAEKGTLQGR--F 425 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 V G + KTG+L GV L+G++ + Q + F Sbjct: 426 IDTAVAGNLQGKTGTLTGVSALSGYLNVPNYQPLVF 461 >UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6G5_NITMU Length = 548 Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 113/459 (24%), Positives = 200/459 (43%), Gaps = 57/459 (12%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 + + V + GA P + ++ PAS K++T A L LGP + + T L G V Sbjct: 77 VGIYVHETGAGQPLLAVNAGVGMSPASVMKLLTTFAGLELLGPGYAWKTELYADGIVRGD 136 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF--ASHDKAP--GW 151 L G+LV + DP L ++ + L+++G+ +I G++++D+S F D A G Sbjct: 137 ALHGNLVIKGYGDPRLNLENFWLLTRRLRQTGLREITGDLVLDSSHFDLPGSDSAAFDGR 196 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 P+ + ++ P A +V+ ++ L P+ + + V P TL G+ Sbjct: 197 PY----RAYNVLPEALMVNYRTLALRLLPQPESRSVRIV-VDPLLPSLDLKNSLTLTNGA 251 Query: 212 AEAQY----CELDVVPGDLNRFTLT--GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 ++ G +R ++T G L +V D A Y + + +Q Sbjct: 252 CNDWKDDLGTDIQFATGLDSRVSVTFKGSYALACGEKTLFLSVHDTARYTFDLFRQLWEQ 311 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG------ 319 G G+ +R++ E + + QS PL D+++ + K S+N A ++ +G Sbjct: 312 QGGVLRGS-VRRSAAPEGIVPLETHQSPPLTDIVRDINKFSNNTAARQLYLTLGLGSGPF 370 Query: 320 ------HARFNV----------------------PGTWRA----GSDAVRQILRQQAGVD 347 A FN+ P RA A+RQ L + V Sbjct: 371 REPQVMPASFNIGYGNDRTAKSGTILSLDGIGEDPDPSRATLAKSETAIRQWLASRQLV- 429 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 I+ +GSGLSR+ I+ M ++L Q F+S LP+ DG+++ R L++ Sbjct: 430 FPELILENGSGLSRNERISAGHMGKLLLAAFQSHVMPEFVSSLPIVAVDGTMKKR--LNR 487 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 + + G+ KTG L+GV +AG++ SG+R V +++ Sbjct: 488 SAIAGQAHIKTGLLEGVKTIAGYVRDKSGRRSVVVFFIN 526 >UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DJ53_THEEB Length = 465 Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 107/402 (26%), Positives = 178/402 (44%), Gaps = 51/402 (12%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV-LKGDLVARFGADP 109 ++ +++ L AS K+ T AAL G RF TTL + + L+G DP Sbjct: 63 NHQGEKLFLVASNVKLTTVAAALDYWGASHRFVTTLSARSPDRTTLRLQGSF------DP 116 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 + QD++ M L + G+ QI +++ P W D+T A + Sbjct: 117 SFSSQDLQQMATRLVQQGIRQIQ---VLELGGVTPVRIEPTWAIEDLTMGNVAVVTRLSI 173 Query: 170 DRNCFSV---------SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELD 220 ++N + L P GD+ P + ++ RT+P + E + E + Sbjct: 174 NQNALKLIATPQGLAQPLILQPPEGDL---------PWPVVNETRTVPTDAPE--FLESE 222 Query: 221 VVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV 280 V + + G L + SEP + +++ Y ++ QAGI +R + Sbjct: 223 V---RGQQIIVRGQLHRGSEPAEMPIPLREPIPYLQQQVQRAFAQAGI--QVQQIRPMET 277 Query: 281 NEP-GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI 339 EP V+ S PL L+ +L++SDN A+ +F + A+ PG RQ Sbjct: 278 AEPLPDVLVRHASPPLSRLILPILQESDNFYAEMLFAALEAAQ---PG--------YRQR 326 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL 399 +Q GV ++ DGSGLSR N + P ++ +LQ +A+ D+ + LPLAG G+L Sbjct: 327 YLEQMGVP--GAVLVDGSGLSRQNWLTPKGLVTLLQQMARSDHASLWRRSLPLAGRSGTL 384 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + R L ++ AKTG+L+GV LAG++ + + F Sbjct: 385 RQR--LRDTAAQDRLWAKTGTLRGVAALAGYVEPLEDRPLVF 424 >UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZBZ1_NATMA Length = 508 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 116/434 (26%), Positives = 190/434 (43%), Gaps = 48/434 (11%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 V A +V +++ Q A +++ + + D S++ PAST K++T AA +LG Sbjct: 62 VDAGDVFDHLDQ----AAISVFARDIETGDVIADSGSERPVQPASTAKLLTTAAAFDELG 117 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 PD+R+ TT+ G+ N + L DP L D+ + A + +G+ ++ +++ Sbjct: 118 PDYRYETTVGVVGDRRNQRVVESLGVVASGDPDLTASDLEALAAAVADAGIERVTDRLVV 177 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP 197 D S F + P W D + + +A +V+ N A I V+ Sbjct: 178 DVSAFDDGEYPPAWTLGDAVNTYGSKSSAFVVNHN--------------EAEITVSRQGD 223 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDL-------NRFTLTGCLPQRSEP-------LP 243 F G + + EL+ V D N +T T + R P +P Sbjct: 224 TCEFEHTVEPDSGLVDVE-IELECVDSDRFVTITTPNHWTNTAEVNGRMVPDDEATASVP 282 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSG----TLLRQTQVN-EPGTVVASKQSAPLHDL 298 +A + A L DE + IT G + T V E VA+ +SAPL D+ Sbjct: 283 VATPNEHAARVFARALADEGVE--ITPGGGGPEPEIEITDVPIELTEEVATHESAPLSDI 340 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 + + S NM+A+ + R + + R G+W + + L AG + I DGS Sbjct: 341 AEGVNHWSYNMVAENIARTVAYEREGTGNGSWSVWEAYLDETL-AAAGAETPQ--IRDGS 397 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSRH+L + ++ ++++ D F + +AG DG+L+ R G VD + K Sbjct: 398 GLSRHDLASARDVVSMIEWGLDADWGEEFYGTMAVAGEDGTLRNRLG----DVDATIRGK 453 Query: 418 TGSLQGVYNLAGFI 431 TGSL+GV LAG I Sbjct: 454 TGSLRGVTCLAGVI 467 >UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Synechococcus elongatus RepID=Q31LV5_SYNE7 Length = 449 Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 110/384 (28%), Positives = 175/384 (45%), Gaps = 21/384 (5%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 Y + + +PAS QK++T +AAL +LGPD R T L + + + +++G DP+ Sbjct: 42 YRAAEALIPASNQKLLTTIAALNRLGPDARLQTRLWLQPSRQTLIVEG------AGDPSF 95 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 R I + AT+ NQ+ G L D AS W D Q + AP I Sbjct: 96 DRAGINALAATVPSDRYNQLIG--LDDP---ASSYWPAAWSGLDRLQGYGAPLNRLIFLE 150 Query: 172 NCFSVSL--YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 N ++L S +P + + + ++ RT+ S A++ LD P Sbjct: 151 NAHQLTLQPRSLGQPLGVLWEDPLDRQRWQVRNRSRTV--SSQAAEFINLDRDP-QRPIL 207 Query: 230 TLTGCLPQRSEPLPLAFA-VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA 288 T+ G L SE +A A Q G + A L+ L AG + S L+ + ++ Sbjct: 208 TVAGQLRAGSESEAVAIAATQPGQRFLEA-LQIRLGTAGSSISTVSLQTNWPSGDRILLT 266 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA-GVD 347 + +S PL +L++ + S N+ A+ + R IG + P R +D QA G+ Sbjct: 267 TVESPPLRELIRTTNEDSQNLYAEALLRWIGRSGQPDPVRDRRAADQAELGRALQAIGIS 326 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 ++ DGSGLSR N ++ T+++ L + Q LP+AG G+L+ R Sbjct: 327 TTGLVVDDGSGLSRRNRVSAQTLLEALLWQVQQPTNQALRDSLPIAGSSGTLRRR--FAN 384 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFI 431 + + G+V AKTG L G L+GFI Sbjct: 385 SPLRGRVQAKTGFLTGAAGLSGFI 408 >UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Rhodobacteraceae RepID=Q2CEY9_9RHOB Length = 516 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 115/406 (28%), Positives = 168/406 (41%), Gaps = 51/406 (12%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 Y + + PAS K +TAL AL LGPD+RFTT L G V GVL+GDL G DPTL Sbjct: 88 YAADEGLPPASVTKAMTALYALETLGPDYRFTTRLVALGEVREGVLEGDLALVGGGDPTL 147 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 ++ ++ LK +G+ ++ G L+ + D PA + ++ Sbjct: 148 GSNNLGDLAKALKAAGITEVAGRFLVWGGALPHEHEID----TDQLDHLGYNPAISGLNL 203 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFS----------------QVRTLPRGSAEAQ 215 N V A+ R S Y VTM + + RTLP + Sbjct: 204 NYNRVHF---------AWARSGSGYDVTMEAVSEGYAPAVATSRMTVEDRTLPVYT---- 250 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 Y D D++ +T+ Q + V++ A YAG + + + GI L Sbjct: 251 YASRD----DIDEWTV--ARRQLGDGGARWLPVREPALYAGDVFRTIARSEGIELDAAEL 304 Query: 276 RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDA 335 + GT +A SAPL +L+ ML S N+ A+ V P + A + A Sbjct: 305 VEEAPE--GTEIARHDSAPLVTILEEMLLYSTNLTAEVVGLSATRELHGRPDSLLASAQA 362 Query: 336 VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGY 395 + LR GV + D SGL + I M+++ D + P+ Sbjct: 363 MNDWLRDTYGV---TSAFVDHSGLGDRSRIGAGEMVKMFVAPGVMDK------LRPILKR 413 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 L+ AG G V AKTG+L V L G+ITTA G+ +AF Sbjct: 414 H-VLKDDAGAPIDGYPATVRAKTGTLNFVSALGGYITTAEGKTLAF 458 >UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porphyromonas gingivalis RepID=Q7MUR9_PORGI Length = 510 Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 100/385 (25%), Positives = 174/385 (45%), Gaps = 21/385 (5%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN- 118 PAS K++T+ + L G + F T + G + G+L G+L+ + G DP+L + Sbjct: 86 PASLVKLVTSASILRLRGTEIPFYTGVGMDGKIRKGILDGNLIIKGGGDPSLASNYLPTD 145 Query: 119 -------MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 +V +K+ G+ +I G++++D S F W D F A ++ Sbjct: 146 SGRFAYALVDAVKQWGIKEITGDIIVDASAFDIEGVNDSWLDEDKGNYFGAGVYGFNIND 205 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 N V L + + +R+ +P V +++ + RG A C + + DL R T Sbjct: 206 NRIDVILATGKAGSEAHILRIEPPHPEVRWENRIEVIHRGKDTAG-CYGEGL--DLKR-T 261 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 LTG LP L + D A Y A K L AG G Q + Sbjct: 262 LTGVLPTNIVSYRLKTDLPDPALYGAAWAKGLLSAAGTLCQGKCRASYQAVPITQELLIY 321 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIG--HARFNVPGTWRAGSDAVRQILRQQAGVDI 348 +S PL L+++M +S N A+ + + ++ + T G +R Q G+ Sbjct: 322 ESLPLDSLVRVMNFRSLNHFAEAFVKQLAPLASKNHRGNTTERGLSVIRNYWTSQTGLQH 381 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVL-QYIAQHD-NELNFISMLPLAGYDGSLQYRAGLH 406 + ++DGSGLSR N +P + Q+L I++ D +F++ LPLAG +G++ + + Sbjct: 382 TDISLSDGSGLSRKNRFSPNALSQILIDMISRGDLVTTSFLNSLPLAGREGTV--KNFMK 439 Query: 407 QAGVDGKVSAKTGSLQGVYNLAGFI 431 ++ + K+GS++GV AG++ Sbjct: 440 DEAIEAYL--KSGSMKGVLGYAGYV 462 >UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G425_9DELT Length = 548 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 120/448 (26%), Positives = 198/448 (44%), Gaps = 46/448 (10%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 + ++ L A +A+ ++ + + A +++ PASTQK+ITA+AA+ LGPD++F T Sbjct: 109 DAVSGLGPKARVAVELRDLDSGARLASIGAERGLHPASTQKLITAIAAVELLGPDYQFET 168 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG--NVLIDTSIF 142 +L +G+ LV R DP L D+ + +A+ + G V++D S F Sbjct: 169 SLSREGDA--------LVLRGQGDPDLHLADL-HALASAAMDDPESLAGVTRVVVDDSAF 219 Query: 143 ASHDKAPGWPW---NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVASYYP- 197 + H PG+ D + AP A +D V++ +PG RVA P Sbjct: 220 SHHRLGPGFGSARPGDFGHSYMAPSGALAMDYATVEVTV----RPGRFNGPARVALSLPD 275 Query: 198 --VTMFSQVRTLPRGSAEAQYCELDVVPGD--LNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 V + + RT G E+ PG R + G +P P + V D Sbjct: 276 AAVELVNHARTGFGGE-----LEVRTEPGSQGRTRVIVEGWIPAGHAPASVRRRVSDPGL 330 Query: 254 YAGAILKDELKQAGITWSGTLL----RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 AGA D L + + L R +A +SAPL ++L L+ S+N Sbjct: 331 AAGAAFADVLARVAGEGAEPLPVVRGRLGATAARSKELAVHRSAPLTEVLSSALRFSNNF 390 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD----IGNTIIADGSGLSRHNLI 365 A+ V R + + PG+W D V + R A + + + +GSGL+R + Sbjct: 391 TAEQVLRTLAWRATDTPGSW---DDGVAVLERFAAALTDDERLADQHFVNGSGLNRDGRL 447 Query: 366 APATMMQVLQYIAQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 +PA ++ L + + ++ AG +G+L+ R G G++ AKTG+ Sbjct: 448 SPAFLVDALALTQRPGSPAQALLASFAEAGSEGTLRGR----LPGAGGRLIAKTGTYGST 503 Query: 425 YNLAGFITTASGQR-MAFVQYLSGYAVE 451 +LAG + GQR +AF ++G +VE Sbjct: 504 SSLAGIVYDEPGQRPVAFAILVNGESVE 531 >UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDI4_LARHH Length = 478 Score = 108 bits (269), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 111/421 (26%), Positives = 180/421 (42%), Gaps = 36/421 (8%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 +L++ + V AP + + + PAST K++T+ AAL LGPD+R+ T + + + Sbjct: 46 DLSVWIAPVEGGAPWLSHRANVAVNPASTMKLVTSFAALDLLGPDYRWRTRWLSPAAIRD 105 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF----ASHDKAPG 150 G L GDL + DP R + +M T++ G+ QIDG +L+D +F +S + P Sbjct: 106 GHLTGDLYWQGSGDPAFDRDALADMARTIRARGIGQIDGRLLLDGQVFRTLGSSSELDP- 164 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFS---QVRTL 207 D + + P A + ++L + P +R A P Q Sbjct: 165 ----DEGRSYQVGPDALLTQFKTVELTLLATPS---GWAVRPAPALPGLQIDNRLQRDDS 217 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 R A V G R L+G LP+ + L V D A + + + Sbjct: 218 GRECPSAARLVSQTVRGQEVR--LSGRLPESCDGSHLYVPVFDHARF-------QSEAFA 268 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHD------LLKIMLKKSDNMIADTVFRMIGHA 321 W + G+ A + HD +L + + S+N++A VF +G A Sbjct: 269 AAWQAAGGQGQPAAASGSTPAGARELARHDSPPLSQVLTDLNRYSNNVMARQVFLTLGAA 328 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 T R + AVR L + G+D +G+GLSRH + A + ++L+ Sbjct: 329 NPQSGDTARDAASAVRASLARH-GIDTQGFAFENGAGLSRHERVTAAGLGEMLRAAQATP 387 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 F S+LP G +G+L+ R + + KTG+L V LAG++ A G+R A Sbjct: 388 FWAEFASLLPRPGGEGTLKRRL----PALAEQARFKTGTLNDVRALAGYL-DAGGRRWAV 442 Query: 442 V 442 V Sbjct: 443 V 443 >UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Gammaproteobacteria RepID=A1U2Q6_MARAV Length = 523 Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 106/415 (25%), Positives = 186/415 (44%), Gaps = 16/415 (3%) Query: 37 ALMVQKVGASAPAIDYH--SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 AL V + + P I+ + + + P S K++T AAL LGP + T T G + Sbjct: 71 ALSVAVIPLNGPGIEQYVNADTLMSPGSIMKLVTTYAALELLGPTHHWKTDFLTDGMMVG 130 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 L+G+L RFG DP L + + + + LK G+N+I+G++++D S F P + N Sbjct: 131 DSLEGNLYVRFGGDPKLTLERLWSTLRELKSMGINRIEGDLVLDGSYFRVDGGFPTFEDN 190 Query: 155 --DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSA 212 + F P+ + + N + A + G A+ V++ ++V LP G Sbjct: 191 GDNPHAPFLVEPSGYLTNLNLLHFQV-RADERGTQAWT-TPDLGEVSIDNRVTALPEGPC 248 Query: 213 EAQ-YCELDVVPGDLNRFT--LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 A+ + + V + ++ T +TG LPQ ++ Y+ ++++ L GI Sbjct: 249 PARSRFDWEPVFHENHQVTVRVTGQLPQGCRSTTY-LSLLPHERYSASVIRSVLSDMGII 307 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 SG R E +V S L +++ + K S N++A + IG A F Sbjct: 308 VSGG-DRFENTPEDARLVMRATSPDLVSMVRDINKWSSNVMARQMLLTIG-AEFRKEDDK 365 Query: 330 RAGSDAVRQILR--QQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 +R + + G++ +I +G+GL+RH I Q+LQ + + Sbjct: 366 DDRVAGIRTVYEWLENTGINTAGMVIDNGAGLTRHGRITARQGAQILQQAWDSPYASDLM 425 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + +P+ DG++ R L G+DG+ KTG L+ V ++AGF + A V Sbjct: 426 ASMPIIAMDGTMARR--LRNTGMDGEGRIKTGYLENVRSIAGFTRDDNNTTWAIV 478 >UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESR7_SORC5 Length = 524 Score = 107 bits (267), Expect = 9e-22, Method: Compositional matrix adjust. Identities = 111/412 (26%), Positives = 188/412 (45%), Gaps = 23/412 (5%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G + ++ V + A + + + PAS K+ TA AAL LGP +R+ T L G+ Sbjct: 88 GGRVGVLALDVASGATLAAFDQRGLYNPASNAKLFTAAAALRLLGPSYRYLTGL--YGDA 145 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW- 151 NG + +LV R DP+L+ +D+ M L+ SGV ++ + ID F + P + Sbjct: 146 SNGTV-AELVLRGSGDPSLRTRDLWEMARALRASGVRKV-AAIAIDQGYFDTRYVPPAFE 203 Query: 152 --PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 P A+ + F+V K G A + + + V T R Sbjct: 204 QQPEEWAAFRAPVAAASLNANALLFTVR---PSKAGQAASVAIDPPGFAVLQGTVTTARR 260 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 G+ E L+ G L+G +P+ + LA V D LK+ L + G+ Sbjct: 261 GAPEKLGVRLEPN-GQRLVAHLSGHIPEGGRAVSLARRVDDPRLVVAYALKEMLLEVGVD 319 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 SG + + + ++ + +SAPL +LL + K SDN A+T+F+ + + PGT Sbjct: 320 VSGEVRLGGERQK--RLLVAHRSAPLGELLSALGKDSDNFYAETIFKTLAAEKRGRPGTA 377 Query: 330 RAGSDAVRQILRQ--QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL--N 385 ++ V + LR+ G D+ ++ +GSGL +P ++++L+ A D L + Sbjct: 378 EGAAEVVGETLRELDAFGQDV---VLRNGSGLFDAARASPEAIVRLLR-AALLDPALGAD 433 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 F + L + G DG+L+ R + + AKTG+L V L+G+I G+ Sbjct: 434 FTAQLAIGGVDGTLRSR--FRGWSKERAIRAKTGTLASVVALSGYILAPPGR 483 >UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Bacteria RepID=C3J9L9_9PORP Length = 483 Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 114/433 (26%), Positives = 194/433 (44%), Gaps = 41/433 (9%) Query: 21 ANVDEYI--TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 A VD I ++ A + VQ V Y +++ PAS K++TA AL LG Sbjct: 32 ARVDSLIRASEESGVARYSFAVQDVSQDTLWAAYRPEELCTPASITKLVTAATALESLGA 91 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTL--------KRQDIRNMVATLKKSGVNQ 130 D+ F T L +G ++ GVL G+L+ DP++ K + ++++ T++ G+ + Sbjct: 92 DYSFCTELYMEGELKRGVLYGNLLVIGSGDPSIDSKFFEQDKERWQQSVLQTVQAKGIRR 151 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS--VSLYSAPKPGDMA 188 I+GN++ID S F P W +D + AA + N + + LY A G Sbjct: 152 IEGNIVIDASRFERMGIHPRWAPDDRGDYY----AAGVYGFNLYDNWLDLYFATG-GVED 206 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 IR+ YP + + + + + Q E D +R TL G LP E + +A + Sbjct: 207 SIRLVGTYPKGVQLALDNRLKVNCKTQGWEGDGANLVEHR-TLLGTLPCNRESVRVAIDL 265 Query: 249 QDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 +A +L+ L+ G+ G R + P T++ S L DL + M +S Sbjct: 266 PHPPLHAARLLRATLEGQGVEILGQEEARFESSSHPRTLIGRYYSPSLRDLCREMNYRSL 325 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA-----GVDIG-NTIIADGSGLSR 361 N A+ +F+ + G+ + LR+Q GV + + DGSGL+R Sbjct: 326 NHYAEALFKALVKEN---------GATSNAAWLREQEILSNWGVTLSPKAHLYDGSGLTR 376 Query: 362 HNLIAPATMMQVLQYIAQ--HDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 N ++ M+ +L ++ N L+ F LP G +G+++ G K+ K+ Sbjct: 377 ANRLSAQDMVALLVGVSTKARGNTLDAFAQSLPRVGREGTVKS----FMPGTSLKLYCKS 432 Query: 419 GSLQGVYNLAGFI 431 GS++GV AG++ Sbjct: 433 GSMRGVQTYAGYL 445 >UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRR0_9FLAO Length = 457 Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 102/426 (23%), Positives = 183/426 (42%), Gaps = 68/426 (15%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 +Y + ASTQK+ TA AAL LG ++ +TTT GN+ G L G+L DPT Sbjct: 56 EYQGNKGLSTASTQKIFTAGAALETLGKNYTYTTTSSYSGNISAGTLNGNLFISSNGDPT 115 Query: 111 L--------KRQDI-RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L K ++ + ++ +K SG+ +I G+++ID S F GWPW+D+ + Sbjct: 116 LGSWRYEGYKPENFKKKLIDAIKNSGITKISGDLVIDDSYFDHQTIPGGWPWDDLGNYYG 175 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ------ 215 A N F +++ F + YP+ + L G + Q Sbjct: 176 AGVWGINWKENQFDININGTD------FKSFS--YPLEGVKWLNDLKTGGSSDQSLIFTA 227 Query: 216 -YCELDVVPGDL---NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 + ++ ++ G L T++G P + PL LA A +K LK++GI S Sbjct: 228 PHSDVALINGMLPSGKTVTVSGSTP--NPPLQLA-----------AEIKQWLKESGIELS 274 Query: 272 GTLLRQTQVNEPG---------TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 G + +Q+ G ++ + QS L ++ L+KS N+ +T+ + +G + Sbjct: 275 GKAVTNSQLEIDGKQALEALKNNIILTYQSPTLDKIVYWFLRKSINLYGETLIKTLGKEK 334 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 +++G +++ + + G++ ADGSGLS N +A +Q L Y + Sbjct: 335 -KGNSNFKSGVSYLKEFWKSK-GINPNMINFADGSGLSPQNYVAAKAEVQALLYARKQSW 392 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + P+ D + K+G+++ + AG+ T G++ F Sbjct: 393 FEAYYDGFPVQ-----------------DNGMKMKSGTMRDTKSFAGYHTAKDGKKYVFS 435 Query: 443 QYLSGY 448 ++ Y Sbjct: 436 IIINNY 441 >UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAN1_9DELT Length = 662 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 117/460 (25%), Positives = 190/460 (41%), Gaps = 69/460 (15%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A+VDE A +++ V+ + ++ DY + PAS KV+T+ AAL LG DF Sbjct: 123 ADVDER-------ARVSVHVRDLSSARVLFDYDGDRALNPASNHKVLTSAAALDLLGEDF 175 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL-KKSGVNQIDGNVLIDT 139 F T + G +L G DPT+ + +R + A + ++ VN+++ ++ID Sbjct: 176 EFETRVLRVG--------AELYLVGGGDPTIDGEALRELAAQVAERVTVNELE-RIVIDD 226 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV----ASY 195 + F PG+ + AP A + N +++Y A +R+ Sbjct: 227 TAFTERQFGPGYSTGGDGVSYMAPSGALSANFNTVEITVYPASGT-KTPLVRLEPDSTHA 285 Query: 196 YPV--TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 Y V + +S +L ++ + E D R + G LP+ S V D Sbjct: 286 YVVNRSRYSSSASLAVSTSAIAWPEPGPRHHDFTRVEIEGGLPRGSRGYRFRRRVADPGM 345 Query: 254 YAGAILKDELKQAGITWS-----------------------------GTLLRQTQVNEPG 284 + G L + + G L R +E Sbjct: 346 FTGGAFARALADVSHSEALPVREGRAPVVEELDELDVLELLDSQDDGGGLPRSVHRSEGP 405 Query: 285 TV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 V VA ++S PL +++ +L S+N IA+ + R +G PG+W G +R Sbjct: 406 DVELVALRRSPPLSEIVAGLLAYSNNFIAEQLLRTLGWKTTGQPGSWDNGGAVLRGYWEA 465 Query: 343 QAGVDIGNT----IIADGSGLSRHNLIAPATMMQVL-QYIAQHDNELNFISMLPLAGYDG 397 +GN +GSGLSR ++ A +++VL H+ LP+AG G Sbjct: 466 -----VGNAPEQLRFENGSGLSRVGRVSAAGLVEVLASSYRTHEGRPALFEALPVAGSKG 520 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 +L R L ++G +V AKTG+L GV L G IT SG+ Sbjct: 521 TLGGR--LLRSGQ--RVRAKTGTLDGVSGLTGVITAESGE 556 >UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=2 Tax=Actinobacteria (class) RepID=C8XK26_NAKMY Length = 554 Score = 105 bits (262), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 118/466 (25%), Positives = 188/466 (40%), Gaps = 87/466 (18%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 A+ V+ + + H + PAS K + AA +LGPD TT ++ G V G Sbjct: 88 AISVRDIDTGEQIVSLHPDTLFEPASVTKTYSTGAAWQELGPDSTVTTPVKRTGEVTGGT 147 Query: 97 LKGDLVARFGAD----------------------------PTLKRQD----IRNMVATLK 124 L GDLV D TL +D + + A +K Sbjct: 148 LNGDLVLVGKGDITMGGRTKPDGTVDFTNLDHNDANGIPGATLTTEDPLTGLNELAAQVK 207 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 SG+N++ G+V++D ++ HD P I+++N + +A P Sbjct: 208 ASGINEVSGDVIVDDRLWQPHD------------LVGNPVTPIIINQNVIDFT-TTATTP 254 Query: 185 GDMAFIRVASYY-PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 G A I ++ P + +QV+T+ G ++ D TLTG + S P+ Sbjct: 255 GQPASIVMSPVVAPWQIDNQVQTVEAGGK----TQIKPTSTDEKTVTLTGTIAADSAPVV 310 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT-------QVNEPG-TVVASKQSAPL 295 + +D A+YA + L +AG+T + + + + G T VA S PL Sbjct: 311 NVYLFKDPATYARTAFIEALGRAGVTVTADPVATNPDSALPPKADVDGLTSVAELTSLPL 370 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR------QQAGVDIG 349 + + + K S N + +F + A AGSD Q LR Q AG+D Sbjct: 371 KEEITYINKISYNNGGEAMFCRLAVA---------AGSDDCEQGLRKGQEIWQAAGLDTN 421 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 ++ DGSGL N + P + +Q+ +A+ + ++ LP+ G DGSL + Sbjct: 422 AVVLVDGSGL-EGNYVTPNSQVQLQTIMAKRPDSQEWLDTLPILGVDGSLATVQSTSPSA 480 Query: 410 VDGKVSAKTGSLQG-----------VYNLAGFITTASGQRMAFVQY 444 GKV KTG+L V L G + T G+ AF + Sbjct: 481 --GKVFGKTGTLAAGDAFNDRYRLPVKALGGQMDTEGGRHFAFAVF 524 >UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4C4A Length = 520 Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust. Identities = 119/441 (26%), Positives = 189/441 (42%), Gaps = 78/441 (17%) Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL--KRQ 114 M PAS K+ T AAL+ LGPD + T + +G V G L+GDLV D L + + Sbjct: 68 MLAPASVTKLFTCAAALVTLGPDHKRETAVYQRGIVLKGTLRGDLVLVASGDLMLGGRTK 127 Query: 115 DIRN------------------------------MVATLKKSGVNQIDGNVLIDTSIFAS 144 D R + +K +G+N+I+G VLID +FA Sbjct: 128 DGRTVFKDKDHTYANGGFGDCEVTDTDPLAGLNALAKQVKDAGINEINGEVLIDDRLFA- 186 Query: 145 HDKAPGWPWNDMTQCFSAPPAAA--IVDRNCFSVSLYSAPKPGDMAFIRV---ASYYPVT 199 + G S P A +V+ N V + K G A + + S Y T Sbjct: 187 RTRGSG----------SGPDAVTPIVVNDNAIDVVVTPGEKEGAPATVTMRPETSLY--T 234 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 M + V T +A + ++P +F + G +P +P F V + AS+A A+ Sbjct: 235 MDATVST----AAAGATANIQLIPIGATQFAVRGTVPVGGKPQLRVFNVDEPASFARALF 290 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTV-------VASKQSAPLHDLLKIMLKKSDNMIAD 312 + L++AG+ +LR V P VA+ SAP D + + LK S N+ A Sbjct: 291 VEALRRAGVRAQCAVLRPGAVLLPPKADYEKLPKVAALASAPFKDTVTVTLKVSHNLYAS 350 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 + ++ A+ T AG R +L+ GVD G+G ++ + ++ +Q Sbjct: 351 AIPCLLAVAQGA--STLDAGLKEERAVLKDL-GVDTNAISFGGGAGGAQSDYVSARATVQ 407 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN------ 426 +LQ +++ + + LP+ G DG+L A + GK AKTG+L Y+ Sbjct: 408 LLQGMSKRSEWDAYKAALPILGVDGTLS-DAVKDDSPARGKAHAKTGTLL-WYDAANERF 465 Query: 427 ------LAGFITTASGQRMAF 441 LAG +TT +G+ + F Sbjct: 466 LLKSKALAGSLTTKNGKELLF 486 >UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRV5_THISH Length = 460 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 7/345 (2%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A +A+ VQ V A P + ++ PAS K+ T+LAAL LGP + + T + G VE Sbjct: 41 ARVAIWVQPVNADKPWLAHNPDTALNPASVIKLATSLAALEVLGPAYTWKTRVHLGGPVE 100 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 GVLKGDL G DP L ++ ++ L++ G+ +I+G+++ D S F D+ P Sbjct: 101 QGVLKGDLWLIGGGDPFLVTEEFWKLLGALRRQGIRRIEGDLVFDLSYFRLPDEEPAAFD 160 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 + ++ P +V+ N V + P GD V P+ L + + Sbjct: 161 GQPHRVYNQGPHPLLVNFNALHVEVMPDPD-GDAVSAVVDP--PIAGLHIDNRLRQRAGP 217 Query: 214 AQYCELDVVPGDLNRFT---LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 L + L T L G P P A +Y + + Q G + Sbjct: 218 CGGYRLGISYRVLEERTGIGLDGRFPGSCGPHRFARTALTPEAYVHGLFRSLWAQWGGEF 277 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 G T + +S PL +L+++ K S+N++ +G F +P T Sbjct: 278 EGGWRVDTWSDVEREPTLVHESRPLGELIRLANKHSNNVMTRHFELTLGAETFGMPATPE 337 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 G +A+ L + G+D ++ + +GLSRHN + + +L+ Sbjct: 338 KGLNAILDYLAAR-GIDSKGLVLDNAAGLSRHNRVTARQLAGILR 381 >UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN6_9SPHI Length = 457 Score = 104 bits (260), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 112/451 (24%), Positives = 186/451 (41%), Gaps = 48/451 (10%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALP-ASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 A+L ++ K G I + Q LP AST KVIT+ AL LG +F F T L G + Sbjct: 30 ASLTVLDSKTG---NVIFSKNGQTGLPTASTLKVITSATALDLLGSNFTFKTKLYYTGEI 86 Query: 93 EN-GVLKGDLVARFGADPTLKRQDIRNM---------VATLKKSGVNQIDGNVLIDTSIF 142 ++ G LKG++V G DPTL M V ++ +G+ ++G+++ D F Sbjct: 87 DSLGTLKGNIVIEGGGDPTLASSRFEGMNEETLLNKWVYAIQNAGIKCVEGSIIGDDRFF 146 Query: 143 ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF---IRVASYYPVT 199 + GW W D+ + A + N V + G A + V S Y + Sbjct: 147 NGNTVPGGWIWTDIGNYYGAGVSGLNWRENSVGVQFKAGNTAGSKATLTSLTVDSSY-LD 205 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + ++ T +GS + Y R + G + + AV D A A L Sbjct: 206 IHNETLTGSKGSGDNVYAYSAPYS---TRIYIRGTYGLDLKK-TIEIAVPDPAFDAAFQL 261 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVAS-------KQSAPLHDLLKIMLKKSDNMIAD 312 + L++AGI L Q++E G +A +S + D++ +KS N+ + Sbjct: 262 QKSLRRAGILTENEPLTGKQLSERGETIAKDRKELDVHESPKMQDIVYWFNQKSINLYGE 321 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 T+ + IG T A +D V++ + + + G I DGSGLS N + M + Sbjct: 322 TLLKTIGMYSGQKIETADA-ADMVKKFWKAKLNIPEGELNIVDGSGLSPQNRVTSLAMAK 380 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 ++ Y + F LP Y+ ++ K+G++ GV G+ T Sbjct: 381 IMNYAKTRNWYDIFYKSLPT--YN----------------EMKMKSGTIGGVLGYTGYHT 422 Query: 433 TASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + +GQ F ++ Y + R L+ Sbjct: 423 SKAGQEYTFTLLVNNYEGSGSAMRKSMFGLL 453 >UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precursor] n=1 Tax=Desulfotalea psychrophila RepID=Q6AJD7_DESPS Length = 413 Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 101/373 (27%), Positives = 159/373 (42%), Gaps = 61/373 (16%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 +PAST K++TALA L LG D+RF+T G KG L G DP L ++I Sbjct: 62 IPASTTKLVTALAGLRILGSDYRFSTDFLYDG-------KGALTIIGGGDPLLISEEIDK 114 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 + LK GV+++ + ++TS+F H P Q + A A +V+ N +V + Sbjct: 115 ICRALKLRGVSRVH-TLRLETSLF--HLPQPALGTEQTEQPYDAHNGALVVNFNSINVRV 171 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 D I +++ + ++ + A ++ + D Sbjct: 172 -------DETGIVLSAEEQTPQLALMKDIVGLEAGKHRINVNQMVAD------------- 211 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGI-TWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 LP Y+G + LK+ GI T + R V + V+ + S L + Sbjct: 212 --DLPPVL------RYSGELFLALLKRNGINTEDARIARGKAVEKSQLVLHWQSSCNLQE 263 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 + LK S+N IA+ +F IG ++ P TW G A+ ++ ++ + +GS Sbjct: 264 TIGKCLKYSNNFIANQIFLQIGLHQYGAPATWEKGRRALNTFIQNDLRIEKSQLQLVEGS 323 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR N I+P M+ VL+ NF A Y L Y + + K Sbjct: 324 GLSRDNHISPRAMITVLE---------NF------APYHSLLPYNS-------QTRTFIK 361 Query: 418 TGSLQGVYNLAGF 430 TG+L+GVY LAGF Sbjct: 362 TGTLRGVYCLAGF 374 >UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Limnobacter sp. MED105 RepID=A6GSV9_9BURK Length = 467 Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 116/425 (27%), Positives = 172/425 (40%), Gaps = 70/425 (16%) Query: 49 AIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 A + S Q+ PAS KV T AL +L +RF T +GVL G L + D Sbjct: 52 AYAHGSSQLVNPASVAKVFTTALALQKLESTYRFKTGFHAVSEPVDGVLAGPLYIKGSGD 111 Query: 109 PTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM-----TQCFSAP 163 P D+ + L+ GV+ I+G V++D S FA + G D + + A Sbjct: 112 PAFLSADLWASLRQLRTKGVDIINGPVVLDDSAFAEQLPSLGLAEEDAFDDAPHRAYHAQ 171 Query: 164 PAAAIVDRNCFSVSL---------YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 P A +++ S+ L P D AF+ S++ L G A Sbjct: 172 PDALLLNFGAMSIDLKINENTVLVVPEEAPKDWAFV-----------SEI-NLTGGGCGA 219 Query: 215 QYCELDVVPGDLNR---FTLTGCLPQR--SEPLPLAFAVQD--------------GASYA 255 + V R T+ G P+R LP+ QD G +A Sbjct: 220 WKNGMSVDFAKAGRDVVVTVKGNYPRRCGQSRLPIRVPAQDWLWESWVQEIWLELGGKFA 279 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 G +K G+T + T+ T +P L DL+K + K S N++A Sbjct: 280 GPQGGQVIK--GVTPANTIALYTHYGKP-----------LSDLIKQINKWSSNVMAR--- 323 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 H V GT A + ++ L+QQ G+ + +GSGLSR I + + L+ Sbjct: 324 ----HLELAVAGTPEAFNVQLKDWLKQQ-GISSNDWFFENGSGLSRDTRIDAKGLAEFLR 378 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 +A + +F++ P AG DG+L R VDG KTGSL GV +L G++ Sbjct: 379 NMAARSDFPDFLASFPRAGADGTLHRRV----TNVDGFAYLKTGSLNGVRSLGGYLRDRE 434 Query: 436 GQRMA 440 GQ A Sbjct: 435 GQLWA 439 >UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXB7_CHLT3 Length = 455 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 101/391 (25%), Positives = 167/391 (42%), Gaps = 51/391 (13%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK------- 112 PAS K++T AAL +LGPDF+F T + G + GVL G+L+ DP L Sbjct: 81 PASNLKLVTTAAALEKLGPDFKFRTDIFIDGYLSYGVLHGNLIISGSTDPLLSGFFDGQI 140 Query: 113 RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN 172 + ++ V TL GV Q+ G V++D S + ND+ + A + Sbjct: 141 NEIVKQWVDTLYTLGVQQVRGEVILDNSYYVG---------NDV-EIDDGEEYAPVQFST 190 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 S + + + ++ +RV + T R RGS L V + N + LT Sbjct: 191 VASFTRANTSQLNRVSRVRVINTRSGTKKVVRRGFSRGS------RLKRVRIEPNIY-LT 243 Query: 233 GCLPQRSEPLPLAFAVQ-DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 L + + F+ + +Y+ I + + K + S Sbjct: 244 DALVGEMKARNIIFSEGIEKINYSQKIDRTQWKH---------------------IYSHY 282 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 SAPL ++L K SDN AD + R +G + + G + V L G Sbjct: 283 SAPLSEILSRTNKTSDNFYADQLLRTLG-GEYRGEASIEKGIEVVNDFLLYNVGASRDEF 341 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGYDGSLQYRAGLHQAGV 410 I DGSGLS N + P +++V++Y+ + ++ L + DG+L R H+ Sbjct: 342 HIVDGSGLSHDNQVTPNLLVEVMKYMKRRSKYFSDYYESLSIPTVDGTLVSRIH-HELAT 400 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + + AKTGS+ G+ +L+G++ + SG + F Sbjct: 401 N--IRAKTGSISGITSLSGYLKSRSGMDIYF 429 >UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Methanosarcina acetivorans RepID=Q8TPE4_METAC Length = 568 Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 117/483 (24%), Positives = 207/483 (42%), Gaps = 100/483 (20%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-G 95 ++V+ + + ++M +P ST K+ T AAL +G D+RF T + +GNV++ G Sbjct: 95 GILVEDLETGEVVYQLNPEKMFIPGSTTKLYTGAAALDIIGADYRFETPIYARGNVDSSG 154 Query: 96 VLKGDLV----------ARFGADPTLKRQDIRNMVAT----------------------L 123 L GDL+ R D + DI + A + Sbjct: 155 NLNGDLILVASGDLTMGGRTTPDGKIDYTDIDHSYANSIGNAILTTPDPLSGLDQLAQQV 214 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKA-PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 +G+ + G+V+ID +F DK P ND T +++ N + + A Sbjct: 215 SAAGIKSVSGDVIIDDRLF---DKINPPDSANDYTL------TPIVINDNLIDIMVKPA- 264 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR-------------F 229 +PG M ++V P+ +A A E DVV D N Sbjct: 265 QPG--------------MAAEVDWRPQTAAYA--IEADVVTTDANETARIEISTGGPGII 308 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT--------LLRQTQVN 281 ++G +P + + + V D +S+A ++L + L++ G+ + + LL T Sbjct: 309 NVSGQVPAGEDTIVQTYTVDDPSSFARSLLIEALERQGVKVNASVKGNNPADLLPATTNY 368 Query: 282 EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDA--VRQI 339 VA S P + LK+++K S NM AD++ ++ V R+ D + + Sbjct: 369 SEFERVALLTSLPFSENLKLIMKVSQNMQADSLLPLMA-----VKEGKRSFWDGLIIERS 423 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL 399 ++ G+D+ I+DG G S + + P T + +L+Y++ ++ + LP+ G DGSL Sbjct: 424 FLEKTGIDLNAVSISDGRGNSPADYMTPRTTVDLLRYMSSGNDSQVYRDALPILGVDGSL 483 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQ--GVYN---------LAGFITTASGQRMAFVQYLSGY 448 G ++ GKV AKTG+ V N L G++ T+ +++AF Y++ Sbjct: 484 ATSVG-PESPAKGKVQAKTGTTAKYDVVNDRLILCSQALGGYMNTSEDRKLAFAIYVNNV 542 Query: 449 AVE 451 V+ Sbjct: 543 PVK 545 >UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJH6_ACIF5 Length = 500 Score = 101 bits (252), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 110/454 (24%), Positives = 198/454 (43%), Gaps = 50/454 (11%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 ++++Q V P + + LPAST K++T L +LGP+ T + + +++GV Sbjct: 51 SILIQDVQKGRPTLSVQADHGQLPASTAKLLTTAYILHELGPESHQKTRILAR-TIDDGV 109 Query: 97 LKGDLVARFGADPTLK-----------RQD----IRNMVATLKKSGVNQIDGNVLIDTSI 141 ++G L+ G DP L R D +R + A + +GV QI +L D + Sbjct: 110 VRGPLIFLGGGDPDLSSRRFPFVRRTVRDDPMYPMRMLAAQVWAAGVRQIPEGILADATY 169 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F + PGW D + AP A + + +V + +PG +R + + Sbjct: 170 FPADSALPGWTEQDQRYWYGAPIHALMFNDAMIAVRI----RPGRAPGVRTNA----EIM 221 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNR----FTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 R + E + P L + + LTG + + A D A +A Sbjct: 222 PNPGGFIRNTVITVSAEDPIRPVRLEKSGSGYLLTGAISAKGGIFAAMLAQPDPAYFAAV 281 Query: 258 ILKDELKQAGITWSGTL--------LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 L+ L++ GI + +Q++ ++A +S PL + + + K S+N Sbjct: 282 ALRQALEEKGILVGNPIQALNNKRGAKQSRGYAHYALLAKHESPPLVEEITVANKVSENT 341 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 + + R AR G+ + + + L +D + ++ DG GLSR + ++ A Sbjct: 342 HVEVLLRDADLARGG-DGSRASTMQGLHRWLSVNGILDTQSRLV-DGCGLSREDRLSAAD 399 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 ++++L + Q ++ LP+ DG+L++R AG V AKTG+L+ +LAG Sbjct: 400 LVRMLLHSYQEPWGGSWRDSLPVNAEDGTLRHRLSALPAGT---VQAKTGTLRDALSLAG 456 Query: 430 FITTASGQ-RMAF---VQYLSGYAVEPADQRNRR 459 FI G + AF V++ G +++R RR Sbjct: 457 FIRDNLGHPQYAFAILVEHFRG-----SEERIRR 485 >UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WKN5_9SYNE Length = 504 Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 111/457 (24%), Positives = 198/457 (43%), Gaps = 46/457 (10%) Query: 1 MRFSRFIIGLTSCIAFSVQA-----------------ANVDEYITQLPAGANLALMVQKV 43 +F ++GL + +A QA A D+Y G ++ ++++ + Sbjct: 27 FKFGELVLGLATSLAILAQAEIAFAGVCRADLPGKIDAIADKYTLD---GTDIGILIEDL 83 Query: 44 GASAPAI-DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV 102 A+ ++Q+ +PAS K++T AAL LGPDF T++ G + + +V Sbjct: 84 TPDTRALYARNAQEKLVPASNVKLLTTAAALQALGPDFSIRTSV--YGQPDAAIQDLYVV 141 Query: 103 ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSA 162 R DPT I + + LK+ GV +++ +D F P W D + A Sbjct: 142 GR--GDPTFTSYQINLLSSQLKQKGVRRVNSLTAVDNH-FTGPVANPYWDEEDYRAGYGA 198 Query: 163 PPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV-----TMFSQVRTLPRGSAEAQYC 217 + I++RN ++A G + + P + + RT+ G+ ++ Sbjct: 199 VANSLILNRNELG---FTAIPNGIGQLLSIVWDRPEFVQGWRIENNTRTVGDGN---EFI 252 Query: 218 ELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 + PG L + G L + + A+ D SY + L G+ + + Sbjct: 253 DAGQKPG-LKVMDVRGQLIAGTASENTSIALLDPGSYFAEQFQQSLSAYGLGNASVQVTT 311 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT---WRAGSD 334 T E +A+ +S PL + S N+ A+ + + +G R VP T + AG+ Sbjct: 312 TSPPEGTVELAAIESPPLRAFIDPTNLYSVNIYAEAMIKTLG--RSLVPETGNAYTAGAI 369 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG 394 AV +L + GV I DGSGLS+ N + P ++ LQ +A+ +N + + L +AG Sbjct: 370 AVGSVL-TELGVSPDGISIVDGSGLSKQNKVTPEAFVETLQVMARTENATTYRNSLAVAG 428 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 G+L+ R + +G+ KTG+L Y L+G++ Sbjct: 429 SSGTLRNR--MQGTLAEGRFQGKTGTLSNTYTLSGYL 463 >UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Polynucleobacter necessarius RepID=A4SZV9_POLSQ Length = 513 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 104/426 (24%), Positives = 188/426 (44%), Gaps = 46/426 (10%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 +++H+ + PAST KV+T L++L LGP +R+ T + T G + G LKG++ + DP Sbjct: 76 LNWHANEAMNPASTMKVLTTLSSLDILGPQYRWRTNVYTDGVIHQGTLKGNIYLQGTGDP 135 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 L +++ ++ L+ G+ +IDGN+ D S +A + + ++ P + Sbjct: 136 KLVPEELAKLMKDLQGLGIQKIDGNLFFDRSAYAPSVMETNTIDGESLRAYNVSPDPLLY 195 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 F + K FI + SY P SQ++ + + + C D ++ RF Sbjct: 196 ---AFRTLSFQLGKSRTADFIDL-SYSPA--LSQLKVVNQMQLVDKPC--DNWKSNI-RF 246 Query: 230 TL----------------TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT 273 L +G P + + D ++ + AG W+ Sbjct: 247 NLDPENSSNTDQAITAQFSGTFPSSCKGVNYNVVALDANTFLTQGFAAAWELAGGAWA-- 304 Query: 274 LLRQTQVNEPGTV-VASK-----QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 Q + G V +A++ + L D ++ + K S+N++A + + + P Sbjct: 305 ---QAPTGKSGNVPLAARLLLQFEGINLGDDVQDINKYSNNVMARQLLLTLALEKMGKPA 361 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T A D V Q +Q ++ +I +GSGLSR+ I+ M Q+L F Sbjct: 362 T-TANGDLVIQSWLKQNSMNFSGLVIENGSGLSRNEAISANQMNQLLLTARNLPISDIFY 420 Query: 388 SMLPLAGYDGSL------QYRAGLH-QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LP+AG DG++ Q R LH + + ++ KTGSL V +AG++ + SG+ A Sbjct: 421 NSLPIAGTDGTMRNRLMTQLRKFLHLKKKPEARI--KTGSLADVRAIAGYVMSKSGKLYA 478 Query: 441 FVQYLS 446 +++ Sbjct: 479 VTSFIN 484 >UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU5_SYNFM Length = 430 Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 102/395 (25%), Positives = 173/395 (43%), Gaps = 31/395 (7%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 ++ S++ +PAS KV+T+ AAL L P ++F T+L ++G L + D Sbjct: 12 EFRSEEPLVPASLVKVLTSYAALKYLKPQYQFRTSLYALDEPRGDTVRGHLWIKSTGDIF 71 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH------DKAPGWPWNDMTQCFSAPP 164 L +++++M LK+ G+ ++G V D S F D+ +N + Sbjct: 72 LLGENLKDMALRLKERGIRFVEGGVFADNSFFNPQAEQICLDERCASSYNPVV------- 124 Query: 165 AAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR-GSAEAQYCELDVVP 223 +A ++ N + ++ K G + S++P + QV L R S +A L V Sbjct: 125 SATSIEFNTIAFTVSGGAKSGTAPQV---SWFPPGDYVQVDNLARTASKKAARVGLAVRS 181 Query: 224 GDL-----NRFTLTGCL-PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 + RF +TG + P+R+ V D AS+ K+ L++ GI G Sbjct: 182 AGMTGTGRERFRVTGKVGPRRN--FEYRLNVDDPASFVARSFKEVLRREGIEVRGADAGP 239 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVR 337 V + + +S L D++ + + S+N +A+ + R +G PGT G + VR Sbjct: 240 GTVPPGAKPLVTHESRALGDIIYGLNRYSNNFMAEMLLRSLGGLVLGPPGTVDKGVELVR 299 Query: 338 QILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL-QYIAQHDNELNFISMLPLAGYD 396 + L GV + GSGLSR + +L A E +FIS G + Sbjct: 300 KSL-VGLGVPPHEVQLKSGSGLSRECRASARAFCTLLANAYADPSIEPDFISSFATNGSE 358 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 G+L+ R D +V KTG+L+ V AG++ Sbjct: 359 GTLRRRI----CKPDVEVRGKTGTLRDVVGFAGYV 389 >UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFU5_NAEGR Length = 453 Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 110/431 (25%), Positives = 175/431 (40%), Gaps = 56/431 (12%) Query: 43 VGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV 102 V + Y+ PAS K++T +AAL LG FRF+T +V Sbjct: 2 VNQTIELFSYNPDPFLQPASNNKLLTTIAALNHLGSKFRFSTDFFYDYKNRR------VV 55 Query: 103 ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF--------ASHDKAP-GWPW 153 R DPTL + ++ + + + + +++D S F ++ P W W Sbjct: 56 VRPKGDPTLTFEQLQKSLMNVLEKVTSMNPHEIVVDASFFNPIPFTNGGDDEEFPDSWEW 115 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG-------DMAFIRVASYYPVTMFSQVRT 206 ++ FS+ P+A ++ N + ++ G D F A + S RT Sbjct: 116 GNLQYSFSSVPSALSLEHNTLTFTVKGGEVAGQGLSIVLDEPFQSFAKDFFEFDTSLSRT 175 Query: 207 L--------PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 L + S + Y LD N+ + G L + E + + A+ Sbjct: 176 LDCSNANIISKESVTSYYKPLD------NKIIVRGQLCAKKESKQTLTVLDTYGFFLQAV 229 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD-LLKIM---LKKSDNMIADTV 314 G + E ++ K+ D +L +M L++SDNM A+ Sbjct: 230 SSASASSNGP--KSVKIDYLSEEERSSMFEFKEECVYSDNILTVMNTTLQESDNMYAELF 287 Query: 315 FRMIG-----HARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 R +G ++ +V P G V+ IL Q + DGSGLSRHNLI+P Sbjct: 288 LRQLGTFIKANSSLDVFPSITTRGIQVVKDILTSQFNLSPFTFFQNDGSGLSRHNLISPR 347 Query: 369 TMMQVLQYI----AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 +++ L I A + F+S+LPL G G+L+ R G VSAKTGSL GV Sbjct: 348 SLVDALSAIYYKGAGGVSGETFVSLLPLGGRSGTLRNRF----VDFPGIVSAKTGSLDGV 403 Query: 425 YNLAGFITTAS 435 +L+G+I A+ Sbjct: 404 SSLSGYIRNAN 414 >UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VN35_ALCBS Length = 502 Score = 99.0 bits (245), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 107/381 (28%), Positives = 171/381 (44%), Gaps = 19/381 (4%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 P S KVIT AAL LGP F++ T L T G +E L G+L DP L + + + Sbjct: 83 PGSIMKVITTYAALELLGPTFQWHTRLYTDGTIEGETLSGNLYFVGSGDPKLTEERLWLL 142 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP----PAAAIVDRNCFS 175 + L+ G+ I G++++D S+F + + ND +AP P + + N Sbjct: 143 LRELRAMGITHITGDLILDGSVFNLPNGITAF--NDDGDNPNAPFLVEPNGLLTNLNVLR 200 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN----RFTL 231 + A G + A + + +Q+ G +Y + D P + T+ Sbjct: 201 IR-ARADNRGIHTWTEPA-LNGIHINNQLVLREYGHCPRRY-QFDYEPTTRDDGSISITV 257 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 TG LP + A Y GA+L +Q G T SGT+ + ++ + Sbjct: 258 TGVLPVGCSTSSYLSLLSQPA-YTGALLSSLWQQLGGTLSGTIREGLRPRADTELLVTTS 316 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA--GVDIG 349 S L +++ + K S+N++ VF +G A+ PG + A R+I A G+D Sbjct: 317 SRDLVTMVRDINKWSNNVMVRQVFLTLG-AKHRQPGDKDDLAAAEREIRAWLAHKGIDSR 375 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 + + +G+GLSR I M Q+LQ + I+ LPL DG+++ R G A Sbjct: 376 SMVFENGAGLSRIERITARQMAQLLQQAWESRFAAELIASLPLVAMDGTMRRRLG--NAN 433 Query: 410 VDGKVSAKTGSLQGVYNLAGF 430 + G KTGSL+ V ++AGF Sbjct: 434 MAGMGHIKTGSLRNVRSIAGF 454 >UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7A5_9PLAN Length = 524 Score = 98.6 bits (244), Expect = 4e-19, Method: Compositional matrix adjust. Identities = 114/453 (25%), Positives = 193/453 (42%), Gaps = 75/453 (16%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVAR---- 104 ++ S ++ PAS K+ + +AL LG +R T L +G + +G L GDL+ R Sbjct: 65 LERDSGKLFAPASVTKLFSCASALDYLGASYRSRTPLLMRGTLASDGTLTGDLILRASGD 124 Query: 105 ------------------------FGADPTLKRQDIRNMVATLKKS----GVNQIDGNVL 136 + +D L QD + L K+ G+ ++ G VL Sbjct: 125 FHLGNRLREDGTIDFTSSDHTYSNWASDSRLTPQDPLTGIIQLAKAARAFGIRKVTGEVL 184 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 +D ++F H + G +T F V+ N +++ A G+MA I Sbjct: 185 VDDTLF-DHTTSSGSGPAQVTPIF--------VNDNVLDLTITPAAA-GEMATIEA---R 231 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 P T ++ + A + V + G +P PL V A YA Sbjct: 232 PATALFKITSEVTTGASDSKASVQVSCDPRGNVVVKGTIPAGRAPLLRHVEVPSPAGYAR 291 Query: 257 AILKDELKQAGITWSGTL-LRQTQVNEPGT-------VVASKQSAPLHDLLKIMLKKSDN 308 A+L + L + GI + L Q P V S PL + +K++LK S N Sbjct: 292 ALLIEALAREGIELVAKISLDHPQAKLPTADDYQKLAAVGEVVSPPLSESVKLILKVSHN 351 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVR---QILRQQAGVDIGNTIIADGSGLSRHNLI 365 + A ++ ++ ++ R ++ ++ + L++ AGVD+G G+G S + + Sbjct: 352 LHASSLPLVVAASQGK-----RTAAEGMKLEGEFLKR-AGVDVGTISFGGGAGGSSADFV 405 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG------ 419 P +Q+LQY+ + D+ +I+ LP+ G DG+L A ++ GKV KTG Sbjct: 406 TPRATVQLLQYMVKRDDAKEYIAGLPILGVDGTLAT-AIDPESPARGKVQGKTGTLVWDN 464 Query: 420 -----SLQGVYNLAGFITTASGQRMAFVQYLSG 447 SL LAG++TT G+R+AF +++G Sbjct: 465 LLNGDSLLTSKGLAGYMTTTKGRRLAFALFVNG 497 >UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flavobacteriaceae RepID=C6X4B5_FLAB3 Length = 486 Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 100/426 (23%), Positives = 184/426 (43%), Gaps = 79/426 (18%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPT 110 Y+ + AST K++T A+ LG +FR+ T LE G V+ +GVL+G+L DP+ Sbjct: 92 YNENTPLIAASTTKLLTTDTAMSLLGSNFRWHTQLEHSGTVDADGVLQGNLYIVGSGDPS 151 Query: 111 LKRQD---------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L + + + L + G+ +++G+++I T IF + N M + Sbjct: 152 LGTNKAGASSYSAVVSDFLYALSEKGIKKVNGDIIIQTGIFKA---------NKMQRL-- 200 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSA------EAQ 215 P ++ ++ SYY LP GS + Sbjct: 201 ----------------------PENIVWLENGSYY----------LPAGSTFQISPQNEK 228 Query: 216 YCELDVVPGDLNR--FTLTGCLPQ-----RSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 P + N+ + ++ + Q + E L V D +Y ++ + + G+ Sbjct: 229 LIAKSSNPFNENKNFYYISPYIKQMVYADKFEGAGLTTKVADPPAYLANTMRASMIKKGV 288 Query: 269 TWSGTLLRQ-TQVN-EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF--- 323 SG ++ + T V+ E T VA S L +++ + ++SDN +A+ R +G + Sbjct: 289 HVSGKVITKITDVDPEIRTKVAVYASPTLGEIVHYINQRSDNALAEATLRTVGFQKEGDQ 348 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 + R +D ++ I +G++ DGSGLSR N++ P + + L + Sbjct: 349 TLESGRRVVTDHLKSINFDTSGLNY-----MDGSGLSRGNVVTPISQAKFLTGLMDEKYF 403 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 + LP+AG G+L+ +G++ AKTG+L V LAG++ T +G+ + F Sbjct: 404 KTYFESLPVAGQSGTLK---NTFTGEGNGQIFAKTGTLNKVKTLAGYLKTNTGKTLVFSL 460 Query: 444 YLSGYA 449 ++ Y Sbjct: 461 LINNYG 466 >UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EI99_9RHOB Length = 490 Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 109/405 (26%), Positives = 177/405 (43%), Gaps = 36/405 (8%) Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 D S + PAS K TAL A+ LG F T + G +ENG+L G+L+ G DP Sbjct: 71 DIQSAKAQPPASVTKAFTALYAIEALGAGHTFATRIFADGIIENGILSGNLILAGGGDPN 130 Query: 111 LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC--FSAPPAAAI 168 L I ++ LK +G+ ++ G+ L+ + + ++ D +Q P Sbjct: 131 LVTDQIADLAQRLKDTGLREVKGDFLVWDNALINQEEI------DESQFDYLGYNPTITG 184 Query: 169 VDRNCFSVSLYSAPKPGDMAFI---RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 ++ N V D R +Y P +++ + R S Y ++ GD Sbjct: 185 LNLNYNRVHFEWKLDGEDYVTTLDARSENYRPAVTTARISVVDRSSPVFTYSDI----GD 240 Query: 226 LNRFTLTGCLPQR--SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 ++++T+ G + S LP V+ A YAG + + GI ++T V Sbjct: 241 VDQWTVAGSALNKEGSRWLP----VRHPALYAGEVFATFARSHGILLKAP--KETAVAPT 294 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G +AS +SAPL +++ ML+ S N+ A+ AR P R + + + + Sbjct: 295 GMTLASLESAPLRQMMRGMLRFSTNLTAEAAGMAATAARAGTPRGLRTSALGMARWANAR 354 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 AG I + + D SGL + ++PA M+++L + + L G D Sbjct: 355 AG-SITPSFV-DHSGLGDQSRVSPADMVRLLGAPDVIQTLRPIMRDIRLVGDD------- 405 Query: 404 GLHQAGVDGKVS--AKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 Q D VS AKTG+L V +LAG+I T SG+ +AF + S Sbjct: 406 --QQVISDPAVSVKAKTGTLNFVSSLAGYIRTKSGRDLAFAFFAS 448 >UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VVH9_9PROT Length = 471 Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 49/380 (12%) Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 V +GD FG P + + + + SG+ +I+ +++ D FA + GW W+D Sbjct: 78 VGRGDPTVGFG--PGCEMPCLETLAEAVADSGITEIE-DIVGDDRWFADERRPLGWSWDD 134 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPG---DMAFIRVASYYPVTMFSQVRTLPRGSA 212 + ++ ++ V+ N + + + PG A++ Y T+ +Q +T SA Sbjct: 135 LKFGYATSISSIAVNDNILPLRVRPSESPGAQVQTAWLDAGDGY-FTLQNQAKT----SA 189 Query: 213 EAQYCELDVVPGDLNRFT-LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 + L + + R L G +P S + L V D A A + LK G+T Sbjct: 190 SSGELALRLERREGERAARLYGEMPSGSRSMTLDLGVDDPAHLAVWYFEQALKAEGVTVQ 249 Query: 272 GTLLRQTQ---------------------------VNEPGTVVASKQSAPLHDLLKIMLK 304 G L + + V G V+AS + P+ D++ + + Sbjct: 250 GELRSRHRALQYTDETIKADLDDPDSPKTCRVSPPVKSDGVVIASLPATPIRDIVNTINR 309 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRA--GSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 S N+ A+ + R +G + GT + G + + L GV + AD SGLS + Sbjct: 310 DSQNLYAEVLLRQLGW----IEGTASSFCGLLHIERFL-NDVGVPRSSYDFADASGLSSY 364 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-GSLQYRAGLHQAGVDGKVSAKTGSL 421 N + PAT+ +L+Y A D + LP+ G G+L+YR ++ V AKTG+L Sbjct: 365 NRVTPATITALLRYAAAQDWGDAYRESLPVGGAPIGTLKYR--FRGTALENNVFAKTGTL 422 Query: 422 QGVYNLAGFITTASGQRMAF 441 V L+G++ SG+ + F Sbjct: 423 NHVDALSGYLVAQSGKVLVF 442 >UniRef50_C9PY01 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Prevotella RepID=C9PY01_9BACT Length = 428 Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 6/181 (3%) Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 EL++AGI Q + T + ++ + +L M+K+SDN+ A+ +F I A Sbjct: 226 ELRKAGIVLDA-FTATGQRPQDATCICTRFHT-MDQILMRMMKESDNLYAEAMFYQIAAA 283 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 N P T + + V++++ + G++ +ADGSGLS +N ++ + +L+Y ++D Sbjct: 284 TGNKPATAKNAAQVVKRLI-SKLGLNAAAYNVADGSGLSLYNYVSAELEVAMLRYAFRND 342 Query: 382 N-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 N L+ LP+AG DG+L+ R + G V AKTGS+ GV++LAG+ T A+G R+ Sbjct: 343 NIYLHLSPSLPIAGIDGTLKSR--MKGVFTRGNVRAKTGSVTGVFSLAGYCTAANGHRLC 400 Query: 441 F 441 F Sbjct: 401 F 401 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 67/129 (51%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 + L LMV + A + ++ Q PAST KVITA+AAL +LG +F T L G++E Sbjct: 82 SQLGLMVYDLDADSAIYRFNEYQTMRPASTMKVITAIAALDKLGGSHQFKTELCYTGSIE 141 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 N L G++ G DP D+ V +L+K GV+ I G + D S+ + GW W Sbjct: 142 NRTLTGNVYCVGGFDPRFNADDMHAFVESLQKMGVDTIRGTLYADKSMKTTDILGKGWCW 201 Query: 154 NDMTQCFSA 162 +D SA Sbjct: 202 DDDNPVLSA 210 >UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW4_ACIBL Length = 1076 Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 128/506 (25%), Positives = 205/506 (40%), Gaps = 76/506 (15%) Query: 12 SCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 S A S A V+E +T+ A A + + + + ++Q++ +P ST K+ T Sbjct: 19 SAQAPSDLAQRVEEIMTRPEFAHATFGMQFYSLKSGKVVYELNAQKLMVPGSTTKLFTEG 78 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTL------------KRQD-- 115 AL LG D+RF T + G ++ NG L+GD+V DP L + +D Sbjct: 79 TALETLGADYRFHTRIYHTGTLKSNGTLEGDIVLVASGDPNLSGRIQPDGTLGFENEDHS 138 Query: 116 ----------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC 159 IR + GV ++ G VLID +F + G T Sbjct: 139 YGGVDSRGVGSDPLLVIREFAQQIASKGVKRVKGRVLIDARLFPQGTRELG------TGV 192 Query: 160 FSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA---SYYPVTMFSQVRTLPRGSA-EAQ 215 +P +V+ N V G A +++A SY V ++V T GS E Sbjct: 193 VMSP---IVVNDNLIDVIATPGATEGAPAQLKIAPETSY--VRFVNKVTTGKTGSKLEFD 247 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 Y + P T TG LP +++ V D A YA +L + L+ I Sbjct: 248 YSDPQPGPNGSQVVTATGSLPLGKPVGMVSYPVPDPARYAQVVLSEALRSQKIEVEIPAN 307 Query: 276 RQTQVN------EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG----HARFNV 325 +P ++A S PL + +KI LK S N+ A ++G HA ++ Sbjct: 308 NDADFKALEPSYKPENLLAEHVSPPLSEEVKITLKVSQNLHASMTPYLLGALAGHATKDI 367 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 +AG D L + G+D+ +DG+G + P +++ L ++A + Sbjct: 368 D---QAGFDVEHDFL-SKVGLDLTAASQSDGAG--GNAFFTPDFVVKYLVHMASSKDAAL 421 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQGVYNLAGFITTA 434 F LP+ G DG+L A G V AKTG+ L LAG++ T+ Sbjct: 422 FRRGLPILGRDGTLAKIETDSPAA--GHVFAKTGTYFVSDALNKNLLVTGKGLAGYMETS 479 Query: 435 SGQRMAFVQYLSGYAVEPADQRNRRI 460 G +AF Y + +V ++ ++I Sbjct: 480 GGDELAFAIYANNVSVPMDSEQAQKI 505 >UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B3Z9_9RHOB Length = 503 Score = 92.8 bits (229), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 111/407 (27%), Positives = 167/407 (41%), Gaps = 68/407 (16%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K ITAL AL LGP+ RF T + T G++ GV+ DL G DPTL + +M Sbjct: 93 PASTAKAITALYALDALGPNHRFATRISTNGSIAGGVISEDLFLIGGGDPTLDTNALASM 152 Query: 120 VATLKKSGVNQIDGNVL-IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN----CF 174 A LK G+ ++ G +D ++ D P P S PA + ++ N CF Sbjct: 153 AAQLKSLGIREVRGQFFYVDNTLPNLRDIDPSQP-----DHVSYNPAISGLNLNFNRVCF 207 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQV----RTLPRGSAE--AQYCELDVVPGDLNR 228 S M R + P S++ R LP + + ++ + V G L + Sbjct: 208 EWRRGSNGYAITMD-ARSTKHRPNVYISKMQIAARDLPVYTYKDGGKFDQWTVARGALGK 266 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT-VV 287 + LP R L A Q A G ILK+ + P T + Sbjct: 267 GG-SRWLPVRKPGLYAADVFQTFARSQGIILKNP--------------KRSTKSPKTRAL 311 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 + SAPL +L+ MLK S N+ A+ V R + +A + + + + Sbjct: 312 VTHTSAPLTTILRDMLKFSTNLTAEVVGLTATRKRGGRATSLKASAKDMSRW--ANTALS 369 Query: 348 IGNTIIADGSGLSRHNLIAPATMM-------------QVLQYIAQHDNELNFISMLPLAG 394 +GN D SGLS + ++ M+ Q+L+ A D + I P+ Sbjct: 370 MGNASFTDHSGLSDASKVSAQGMLNAMIVARRRAGFAQLLKPFAMRDAKRKLIKNHPI-- 427 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 KV+AKTG+L V L+G+IT G+++AF Sbjct: 428 ------------------KVNAKTGTLNFVSALSGYITAPDGKQLAF 456 >UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Deltaproteobacteria RepID=Q1NK58_9DELT Length = 428 Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 104/410 (25%), Positives = 172/410 (41%), Gaps = 58/410 (14%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K+ TAL AL +LG D+RF T T G+ DLV DP L +++ + Sbjct: 54 PASTWKIATALLALERLGEDYRFQTLFYTAGD--------DLVIEGRGDPLLVSEEVAAI 105 Query: 120 VATLKKSGVNQIDGNVLIDTSIFA-SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 A L +GV +++ N+++D S F H PG + A A +V+ N + + Sbjct: 106 AARLAAAGVKRLE-NLILDDSFFRLEHSPPPGA--GTSRRSHDAANGALVVNFNTVHLEI 162 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 +A G ++ + Q TLP A + +R LT C Sbjct: 163 GTA---GQVS----------SAEEQTPTLPLMHKLA-----TGLAAGRHRLNLTSC--DV 202 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 +E + Q Y+G + + L Q GI G ++ + + + S L ++ Sbjct: 203 TEHGACEVSKQYSQRYSGELFRHLLAQHGIEIDGNVVSGRRPADSQLLYRHHSSRTLAEV 262 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 + ML S+N +A+ + + A P TW G + L ++AG+ + +A+GSG Sbjct: 263 VAEMLLYSNNFVANQLLLTVA-ALEQPPATWEKGRQTLAAYL-EEAGLAANSFQVAEGSG 320 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR N I P + +L+ H +LP +G+ K+ Sbjct: 321 LSRANRITPRALGHLLELFKPH------AQLLP------------------REGQKLLKS 356 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 G+L+GVY AG+ + A + +PA+ R+R + L+ R Sbjct: 357 GTLRGVYAYAGYFQHPAANGAAGLDPFVLILEQPANTRDRALELLEQHYR 406 >UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Rhodobacteraceae RepID=B9KKY6_RHOSK Length = 507 Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 113/399 (28%), Positives = 166/399 (41%), Gaps = 51/399 (12%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K +TAL L LGPDFRFTT L G V NG+L+GDL+ DPTL + M Sbjct: 102 PASTAKTVTALYGLETLGPDFRFTTRLLATGPVTNGILQGDLILSGSGDPTLSTDALGEM 161 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC--FSAPPAAAIVDRNCFSVS 177 A L+ GV I G L D S P P D Q PA + ++ N V Sbjct: 162 AARLRARGVTGITGRYLADASAL------PAVPLIDPEQPDHVGYNPALSGLNLNFNRVH 215 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQV-RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + + A + VTM ++ R +P + VV DL +T G Sbjct: 216 FE---------WKQAAKGWSVTMDARAERFVP----PVSMARMKVVTRDLPIYTYAGD-- 260 Query: 237 QRSEPLPLA-----------FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 Q S+ +A V+ +Y + + + GI + +V G Sbjct: 261 QGSDSWTVASGALGAAGSRWLPVRHPEAYTAEVFQTLARAQGIELPAAQV--VRVRPEGA 318 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 + QS PL ++L+ MLK S N+ A+ V G A P ++ + A+ ++ G Sbjct: 319 ALVEWQSDPLREILRDMLKFSTNITAEAV----GLAASGAPSLAQSAA-AMSAWANRRFG 373 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 + +T D SGL +L++ A M+ L +A L ++ G + G Sbjct: 374 I---STAFHDHSGLGGGSLVSAADMVTAL--LAAEREGLGLRPLMKRTEIGGGKGTKKGA 428 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + V+AKTG+L V L G T G+ + F Y Sbjct: 429 RRIA----VAAKTGTLNFVSGLVGIATAEDGRDLVFAIY 463 >UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RY58_RHORT Length = 528 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 114/438 (26%), Positives = 178/438 (40%), Gaps = 86/438 (19%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 +++Q+ LPAS KV T +AAL LGP +R+ T L + G+V +GVLKGDL G DP L Sbjct: 79 HNAQEPFLPASVSKVPTTVAALELLGPSYRWETRLVSTGSVVDGVLKGDLYLVGGGDPVL 138 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 + + +V +L +G+ +DG L D ++ AS + P ++ A +D Sbjct: 139 DGRRLSALVDSLGTAGIRAVDGRFLYDDTLIASAPEIE--PSQPADLAYNPGFGALALDF 196 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 N V L PK G R+ + V VR G + + T Sbjct: 197 N--RVMLTWDPKGGP----RMGEVFDVPPVDSVRFRVSGPQDPPWS------------TK 238 Query: 232 TGCLPQRSEPLPLAFA---------VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE 282 G L P P+ A G S+ +L K +G TW V Sbjct: 239 AGALRYEDTPPPVVTAGLAPMAHPPQTPGESW---VLAPTWKGSGSTW-------LPVKH 288 Query: 283 PGTVVAS------------------------------KQSAPLHDLLKIMLKKSDNMIAD 312 PG VA +S PL ++ LK S+N++A+ Sbjct: 289 PGAHVAQVARALAQRDGVTLPPPQPGAAPPRARVIGLSESPPLFEVATAALKHSNNLVAE 348 Query: 313 TV-----FRMIGHARFNVPGTWRAGSDAVRQILRQQ-AGVDIGNTIIADGSGLSRHNLIA 366 + R+ G A ++ + + R G+D +A+ SGL+ + + Sbjct: 349 MIGMTATRRITGRALAPT-----ESAETLAALFRATLPGLDWSTFRLANHSGLTMDSRMT 403 Query: 367 PATMMQVLQYIAQHD-NELNFISMLPLAGYDGSLQYRAGLHQAGVDGK--VSAKTGSLQG 423 P M +L Y H + L++ +LP + L+ + L + DG+ V AKTG++ Sbjct: 404 PEQMTAILDYAQLHAFSGLDYAGLLPTRRW--GLEDDSDLPET-RDGRLPVWAKTGTVYY 460 Query: 424 VYNLAGFITTASGQRMAF 441 LAG+I SG +AF Sbjct: 461 GRGLAGYIVPRSGHLLAF 478 >UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGJ9_KOSOT Length = 380 Score = 92.0 bits (227), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 59/221 (26%), Positives = 118/221 (53%), Gaps = 21/221 (9%) Query: 259 LKDELKQAGITWSGTLLRQ--TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 LK ++ G++ G ++ + ++ +EP + +S PL ++LK M++ SDN +A+ +FR Sbjct: 179 LKSTFEELGVSVKGEMVVKYISKKHEPAYI---HESKPLREILKSMIEVSDNQVAEQIFR 235 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 +G A+ GT A+ + ++ + + I DG GLSR+NL++P ++++L++ Sbjct: 236 TVG-AKVLKKGTINNSIAALIRTVKSVTEYGVNDFTITDGPGLSRYNLVSPKLVVEILKH 294 Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 + + + + +L + DG+++ R D +V KTG+L GV LAGF+ T SG Sbjct: 295 MYKKYGD-TLLDILSYSKNDGTIKGR-------FDFEVWGKTGTLTGVSGLAGFMKTKSG 346 Query: 437 QRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 + + F + + ++ D + FE+ + + Y+ N Sbjct: 347 KMVVFSLFENNFSKSKTDAKG-------FENSILEIFYEGN 380 Score = 44.3 bits (103), Expect = 0.012, Method: Compositional matrix adjust. Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 11/122 (9%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 + + V+ + Y++ ++ PAS K+ T LAAL LG ++ + T G Sbjct: 32 VGIYVEDIETGEIITQYNATKLFTPASVTKLFTLLAALENLGLEYTYKTKFYLIGE---- 87 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATL-KKSGVNQIDGNVLIDTSIFASHD-KAPGWPW 153 D + DPT+ + +++A + + + +I+ N+++D +F + GW W Sbjct: 88 ----DFGVKGSGDPTIYVSTLHDIIAKIVEDKKIVEIN-NIILDDRLFDRKEIYGRGWMW 142 Query: 154 ND 155 +D Sbjct: 143 DD 144 >UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MCM7_9PORP Length = 500 Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 116/456 (25%), Positives = 196/456 (42%), Gaps = 101/456 (22%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV- 92 A + V ++ + PA+ YH+ + PAS K+ ++ ALI LG D++F T + +G + Sbjct: 45 ARYGVSVWRIDQTKPALSYHASERFTPASVTKIFSSATALIVLGADYQFPTEIGYRGTIT 104 Query: 93 ENGVLKGDLVARFGADPTL------KRQDI--RNMVATLKKSGVNQIDGNVLIDTSIFAS 144 GVL GDL+ DP+L +R+ I + L+K+G+ QI G +++D S + Sbjct: 105 SEGVLDGDLIIVGHGDPSLESKHYPRRKGIFYDQVYLALQKAGIRQIRGRIVVDASAYCD 164 Query: 145 HDKAPGWPWNDMTQCFSAPP---------------AAAIVDRNCFSVSLYSAPKPG---- 185 W D + + AP +A V R S PG Sbjct: 165 EGYLEAWSRGDWGKRY-APALYGVNLCDNIMQVGISAQDVARGASEPSYLHPATPGHAWQ 223 Query: 186 -DMAFIRVASYYPVTMFSQVRT-------LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 D+ ++ + ++ + RT L RGS++ Q V+ DL Sbjct: 224 IDIQLVKRGNLLAISADRESRTTRRLSGRLARGSSKRQ-----VIACDL----------- 267 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP-LH 296 S P +A A+Q L + L+Q GI +++E +V +SAP L Sbjct: 268 -SNP-AMALALQ---------LAEHLQQRGI----------ELSECRSVAYYDRSAPVLT 306 Query: 297 DLLKIMLK------------KSDNMIADTVFRMIGHARFNV-PGTWRAGSDAVRQIL--- 340 LL I L S N+ A+ + R IG+ +V G + A+++ + Sbjct: 307 TLLDIYLSPHLSELIRTCNFHSVNLYAEALLRSIGNHFGSVQQGECFSTHQALKREMNYW 366 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN--FISMLPLAGYDGS 398 R+ + + DGSGLS + ++P + L+ + Q + FI LP G G+ Sbjct: 367 RETCALPADQLELYDGSGLSPRSKLSPYALTAALRQVYQLPLPTSDPFILSLPQVGRQGT 426 Query: 399 LQYRAGLHQAGVDGKVSA--KTGSLQGVYNLAGFIT 432 ++ L A +++A K+GS+QGV N AG+++ Sbjct: 427 VR---SLMPA---SRITAYFKSGSIQGVQNYAGYVS 456 >UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Rhodobacteraceae RepID=Q16AV2_ROSDO Length = 499 Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 107/409 (26%), Positives = 167/409 (40%), Gaps = 36/409 (8%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K ITAL AL LG RF T + G V +GV++GDLV G DPT + + Sbjct: 86 PASVTKAITALYALDTLGAAHRFKTRVIATGGVTDGVVRGDLVLAGGCDPTTDTRAFAAL 145 Query: 120 VATLKKSGVNQIDGNVLI-DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 A LK++G+ ++ G+ + + + P P PA A + N V Sbjct: 146 AAQLKEAGIREVKGDFRVYEGPVATVRSIDPEQP-----DHVGYSPAVAGIALNFNRVHF 200 Query: 179 YSAPKPGDMAFI---RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 G R Y P ++++ + R + Y E + G N +G L Sbjct: 201 EWKRAGGKYTVTMDARAGRYRPEVAVARMKVVQRRAPIYTYEEAN---GRDNWTVASGAL 257 Query: 236 PQ-RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 S LP V+ YAG + + GI L++ G V+A +SAP Sbjct: 258 GSGGSRWLP----VRRPGLYAGEVFATLARSHGIVLPAAKLQKAAPQ--GAVLAEIESAP 311 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARF----NVPGTWRAGSDAVRQILRQQAGVDIGN 350 L D+L+ MLK S+N+ A+ + AR ++ + R + + +L+ Q + Sbjct: 312 LSDVLRAMLKYSNNLTAEMIGMAATQARTGQVRSLAASAREMNAWAKDVLKMQ------S 365 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 D SGL + ++ M++ L I + + L G L H Sbjct: 366 PAFVDHSGLGGDSRVSAQDMVRGLGAIGHAALLRPLLKSVKLLDSQGRL---VNEHPVQA 422 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 D AKTG+L V L G++TT G+ + F + + A R +R Sbjct: 423 D----AKTGTLNFVSGLGGYVTTPEGRELVFAIFAADEATRAGITRAQR 467 >UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W606_9ACTO Length = 465 Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 65/203 (32%), Positives = 103/203 (50%), Gaps = 8/203 (3%) Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 QD A A L AGI+ G + R + V E +V+AS SAPL ++L + LK SDN Sbjct: 241 QDPAMEAAQAFATALTAAGISIEGDITR-SHVAEGTSVIASVDSAPLSEILAVSLKASDN 299 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 + + R++ A + ++ + AV + L+ G D+ + + D SGL+R + + Sbjct: 300 TMTEVEGRVLAAATGH-EASFAGAAQAVLERLKAD-GFDVSDVTMLDCSGLARADRVPAR 357 Query: 369 TMMQVLQYIAQHDNEL---NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 + Q+L A D + I+ LP+AG DG+L R + G V AKTGSL Sbjct: 358 LLAQILARAAGDDGGTVGRSLITALPVAGLDGTLHDR--FTEGAATGTVRAKTGSLDQTA 415 Query: 426 NLAGFITTASGQRMAFVQYLSGY 448 +L+G + T G+ +AF + G+ Sbjct: 416 SLSGTVVTRQGRLLAFSVIVDGF 438 >UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S792_9ACTO Length = 487 Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 57/159 (35%), Positives = 91/159 (57%), Gaps = 8/159 (5%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 + S +SAP+ L++ L +SDN++ +++ R + AR ++P T+ ++AV L AG+ Sbjct: 302 LGSVRSAPVARLVEQALSQSDNLLTESLARHVALAR-DLPATFEGAAEAVTGAL-TDAGL 359 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL----NFISMLPLAGYDGSLQYR 402 D+ ++DGSGLS + + P ++ L + D L +S LP+AGYDG+L R Sbjct: 360 DVTGVSLSDGSGLSTTDRV-PVELLTEL-FTGAADGTLPGTSAVLSGLPVAGYDGTLFDR 417 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 A G V AKTG+L GV+ LAG + TA G+ + F Sbjct: 418 GDADPATAPGSVRAKTGTLLGVHGLAGTVVTAEGRLLVF 456 Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 52/151 (34%), Positives = 69/151 (45%), Gaps = 21/151 (13%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G + V V A +D S + PAST K++TA+AAL LGPD TTLET V Sbjct: 114 GPGVEARVVDVAAGEVLLDQDSDVPSTPASTAKLLTAVAALTTLGPD----TTLET--TV 167 Query: 93 ENGVLKGDLVARFGADPTLKRQ----------DIRNMVATLKKS---GVNQIDGNVLIDT 139 G G++V G DPTL R + ++ A ++ S G V+ID Sbjct: 168 VAGSAPGEVVLVGGGDPTLSRTVPSLTYPGAPTVADLAAQVRGSLPAGTRVT--RVVIDN 225 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 S+F A GW D ++AP A VD Sbjct: 226 SLFQGPLTASGWGPGDAPSTYAAPVTATAVD 256 >UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LES6_9BACT Length = 406 Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 57/174 (32%), Positives = 93/174 (53%), Gaps = 11/174 (6%) Query: 23 VDEYIT-QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 VD +T +L + + L + + A + + + + Q+ PAS QKVITA+ AL QLG DF Sbjct: 48 VDSLLTPELLTRSQVGLHIYDLTADSTILAFGADQLMRPASNQKVITAVTALSQLGTDFN 107 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T+L +G++ + L+G++ + G DP D+ ++ L GV I G+V++D S+ Sbjct: 108 FRTSLYGEGSINDSTLEGNIYIKGGFDPRFGHDDLWALIHALNARGVRAIAGDVILDLSL 167 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIV--DRNCFSVSLYSAPKPGDMAFIRVA 193 S GW W+D PP ++ R+ F+ +L +A K A IR+A Sbjct: 168 KDSARLGWGWCWDD-----DNPPLTPLLYNQRDNFTAALSAALKD---AGIRLA 213 Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 71/226 (31%), Positives = 119/226 (52%), Gaps = 12/226 (5%) Query: 219 LDVVPGDLNRFTLTGCLPQRSEPL-PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 LD+ D R C + PL PL + +D + A L LK AGI +G+L+ + Sbjct: 163 LDLSLKDSARLGWGWCWDDDNPPLTPLLYNQRDNFT---AALSAALKDAGIRLAGSLI-E 218 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF-RMIGHARFNVPGTWRAGSDAV 336 +++ G + + +S + +L M+K+SDN+ A+ +F ++ H+ G +A + + Sbjct: 219 GRISS-GASLWTVRSHTIDQILLRMMKQSDNLYAEALFYQLAAHSGKAYAGRKQAVA-YI 276 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGY 395 +++ R Q G+ + ADGSGLS +N +P + L+Y H+ L+ LPLAG Sbjct: 277 KELARHQ-GLAPADFSFADGSGLSLYNYASPRLLTAFLRYAYTHEGIFLHLQPSLPLAGV 335 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 DG+L+ R + VSAKTG+L+GV L+G+ T +G + F Sbjct: 336 DGTLRKR--MTSGPAYANVSAKTGTLEGVSTLSGYCTAPNGHTLCF 379 >UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Pedobacter RepID=C6XU53_PEDHD Length = 468 Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 108/412 (26%), Positives = 174/412 (42%), Gaps = 51/412 (12%) Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRN- 118 AST K ITA A LG DF+F TTL G + +G LKG+LV DPTL +N Sbjct: 69 ASTLKTITAATAFNILGKDFQFQTTLGYTGQLTPDGTLKGNLVITGSGDPTLGSARYQNK 128 Query: 119 -------MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 V + +G+ +I+G V+ D IF + GW W D+ + A + Sbjct: 129 EKAVLDQWVNAISAAGIKRIEGMVIGDDRIFGTQTTPEGWTWQDIGNYYGAGTSGLAWRE 188 Query: 172 NCFSVSLYSAPKPGD-----MAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGD 225 N F + L +PG + +R P + + ++++T G+ + Y L P Sbjct: 189 NQFDIHL----QPGQGINTAVKLLRTVPEMPYLKLVNELKTGASGTGDNAYAFL---PPY 241 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS--GTLLRQTQVNE- 282 N L G ++ A+ D A L+D LK+ GI+ + T R +N Sbjct: 242 SNIGYLRGSWGMGIGKNGISAALPDPAFDCAYRLQDTLKRLGISTAKPATSTRMMALNGE 301 Query: 283 --PGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 PG ++S S PL +++ LKKS N+ +T+ + + + T + Sbjct: 302 ELPGITKNLSSISSPPLSEIVFWFLKKSINLYGETLLKTLALKSGKMAKTTEGAKAEIN- 360 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGYDG 397 G+D I DGSGLS N + A M +L ++AQ + ++ P Y+G Sbjct: 361 -FWADKGIDRNALNIIDGSGLSPANRVTAAAMGSIL-FMAQTASWFSDYYKAFPE--YNG 416 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 + K+G++ V AG+ T +G + V ++ Y+ Sbjct: 417 ----------------MKIKSGTINDVSAFAGYYTNGAGNKYIIVININNYS 452 >UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Micromonosporaceae RepID=A4XCT3_SALTO Length = 593 Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 57/163 (34%), Positives = 95/163 (58%), Gaps = 7/163 (4%) Query: 283 PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 PG+ + +S P+ L+ IM+ SDN++A+ + R + AR P ++ ++++R + Sbjct: 402 PGSELGVVESLPMVRLVDIMISDSDNVVAEVLARQVALARGQ-PASFSGAAESMRAVA-G 459 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-EL-NFISMLPLAGYDGSL- 399 + G+ + +ADGSGLSR N I+P+ + +++ A EL LP+A + G+L Sbjct: 460 ELGLPVAALTLADGSGLSRANRISPSLLTDLVRLAADGSRPELATLFGGLPVAAWSGTLT 519 Query: 400 -QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 +Y QAG G V AKTG+L GV+ +AG +TTA G+ +AF Sbjct: 520 KRYTDVAAQAGA-GMVRAKTGTLTGVHAIAGLVTTADGRLLAF 561 >UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTD2_CHRSD Length = 492 Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 114/420 (27%), Positives = 183/420 (43%), Gaps = 30/420 (7%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRN 118 PAS K+ TA A+L + GP RFTT L G V+ GVL+GDLV G DP L +++ Sbjct: 76 PASVTKLYTAAASLDRWGPQHRFTTQLMATGEVDAQGVLQGDLVFDGGGDPALTSENLWR 135 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFA-----SHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +V L++ GV +++G +++ F + D+ +D +SA ++A V+ Sbjct: 136 LVQRLRERGVRKVNGELVVSQWRFGPVTCVTTDRCEARTRSD--NAYSALLSSAAVNYGS 193 Query: 174 FSVSLYSAPKPGDMAFIR-VASYYPVTMF-SQVRTL-PRGSAEAQYCELDVVPGDLNRFT 230 + + GD A I + P+T ++V T+ P G L GD R Sbjct: 194 WCNLIKPGAAVGDAATISDCTTVAPLTRIDNRVTTVAPGGDTRLSAERLSDAQGDTLR-- 251 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 ++G + + A D A L L QAGI G T +A+ Sbjct: 252 ISGQIAHGGFSREIYRASSDPAEQTAKTLVALLGQAGIEVDGHATSTTPPPTTAKRLAAV 311 Query: 291 QSAPLHDLLKIMLKKSDNMIADTV-FRMIGHARFNVPG-TWRAGSDAVRQILRQQAGVDI 348 PL ++L ML S+N +ADT+ ++ PG + R DA+ + R G Sbjct: 312 DGKPLQEVLLRMLNYSNNFMADTLALDLVAK-----PGASLRDAGDALMRFARDLPG--H 364 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGYDGSLQY-RAGLH 406 G + GSGL+ N ++ + +L + + F++ L L +G + + R G Sbjct: 365 GVPTLVSGSGLTPENRVSAQDINALLSAMYRRSALFPTFVAGLQLP-TNGPMHFIRRGSE 423 Query: 407 QAGVDGKVSAKTGSLQ---GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V KTG+L V +AG+ T G+ +F ++G A P + +PLV Sbjct: 424 T--FQQNVMLKTGTLNEPVTVRAVAGYFRTRQGRWGSFAVLVNGTAQTPYLAWRQVLPLV 481 >UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QDN4_PSYCK Length = 707 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/446 (21%), Positives = 184/446 (41%), Gaps = 60/446 (13%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 +P +++ PAST K++ + AL LG DF + T + G + L GDL+ + Sbjct: 244 SPLLNHQPDIARTPASTMKLVPSFIALDILGADFVWHTRVYHTGIIIGNTLLGDLIIQGS 303 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP + + ++ ++ +K +G+ IDG++++D++IF K P N + ++A P Sbjct: 304 GDPKMTHERLQQLLYKVKAAGIRHIDGDIIVDSTIFNHVTKDPAAFDNAPLRPYNASPDG 363 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYP----VTMFSQVRTLPRGSAEAQYCELDVV 222 +V+ + + Y P + A ++ +Y P + S++ P +A+Y + Sbjct: 364 FLVNFSTIGIQSY----PLNNAQAQL-TYTPQLADYKLPSKINIRPSACGQARYS---LA 415 Query: 223 PG-DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 P + T LP A D +A ++K + + T +G ++ Q Sbjct: 416 PQWQATQLTFDTSLPDNCGNHAFYVAYPDAKDFAARVIKAKWQALDNTLTGNVVAQETPY 475 Query: 282 EPGTVVASKQSAPL-----------------------HDLLKIML-----------KKSD 307 + ++++ A L H +M K D Sbjct: 476 KNKKSISARGLAALPMSPLPIVSYPSLNLTQQIYDINHFSNNVMTEQVALSIGAYHKPKD 535 Query: 308 NMIADTVFRMIGHA--------RFNVPGTWRAGSDAVRQILRQ--QAGVDIGNTIIADGS 357 + T+ + + A +F P T A Q + + Q + + +GS Sbjct: 536 ETVNPTINKNVDKAINSQHSLYQFGKPAT--TSYPAALQTINEWWQTHLSTPPPHLTNGS 593 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS-LQYRAGLHQAGVDGKVSA 416 GL R I+ A + ++L Y H + +++ L +AG G+ L + L ++ G+ Sbjct: 594 GLCRDCTISAANLSELLTYAYAHPSFNAYVNSLGIAGVSGTILTHSERLPESNAIGRAWI 653 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFV 442 KTG+L V ++AG++ SGQ V Sbjct: 654 KTGTLNNVTSMAGYVKGLSGQDYVVV 679 >UniRef50_UPI0000382F06 COG2027: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382F06 Length = 251 Score = 84.3 bits (207), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 64/179 (35%), Positives = 96/179 (53%), Gaps = 7/179 (3%) Query: 265 QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 Q G+T SG ++R +E G V +SAPL D++ +L+ SDN I + V R++ Sbjct: 45 QEGVTVSGDVVRAPAPSE-GRTVGEVESAPLGDVVAYLLQHSDNTITEVVGRVVAL-DAG 102 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ--HDN 382 +PG+ + AVR + + GVD+ +AD SGL +++ PA + +V+ +A H Sbjct: 103 LPGSGAGATQAVRAAV-EGLGVDLTGATLADLSGLGDGSVVTPAQLDEVVGLLADPAHPR 161 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 LP+AG G+L R L AG G V AKTGSL V +LAG + TA + + F Sbjct: 162 LRPGAVGLPVAGLSGTLDERY-LANAG-RGVVRAKTGSLPNVTSLAGTVVTADDRLLVF 218 >UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHL4_CORU7 Length = 458 Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 99/182 (54%), Gaps = 12/182 (6%) Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 SAPL L+ M+ SDNM+A+ V R + ++ ++PGT++ ++ V ++L+ GVD Sbjct: 286 SAPLSTRLRDMMLHSDNMLAEAVGREVAISQ-DLPGTFKGATEGVLKVLKDN-GVDTEGA 343 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQ--YRAGLHQAG 409 ++ D SG+S N ++ + L H + + LP+AG +G+L+ Y AG Sbjct: 344 VLHDTSGMSEDNRLSAHNLNSALGSKKLHALQQD----LPVAGAEGALRNRYLAGSGAED 399 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 G V AKTG L GV LAG + T SG+ ++F +LS PAD + R L R + + Sbjct: 400 AAGWVRAKTGFLDGVNALAGTVVTKSGRPLSFA-FLSNT---PADVGDGREALDRLAAAV 455 Query: 470 YK 471 Y+ Sbjct: 456 YR 457 >UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI39_DESAA Length = 417 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 97/388 (25%), Positives = 155/388 (39%), Gaps = 85/388 (21%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 Y+ + PAST KV T+L AL LG DF F T + G +G+L + DP L Sbjct: 74 YNPNALRTPASTFKVFTSLLALKILGEDFHFKTEIYQDG-------EGNLKIKGYGDPLL 126 Query: 112 KRQDIRNMVATL--KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 + + + + + QI ++D+S F + + PG + AP A V Sbjct: 127 ISEVLEPLAGEIAFRTKSCKQI----VLDSSYFKTPLEIPGT--GSTANPYDAPVGALCV 180 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ----VRTLPRGSAEAQYCELDVVPGD 225 + F+ ++ G +A P+ F++ + LPRG A Sbjct: 181 N---FNTVFFTCDANGKLA--SAEDQTPLIPFAEKIIRSKKLPRGRA------------- 222 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 L Q E L YAG +L+ L++ G+ +L + + PG Sbjct: 223 --------LLTQEHEQTTL---------YAGHLLRYFLREKGVVCGEVVLGRVK---PGD 262 Query: 286 VVASKQSAP--LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 + + +P L ++ L+ S+N I + VF +G P T + R+ + Sbjct: 263 TLLFEHESPYSLTEVAGKALEFSNNFIVNQVFLSVGAHEKGAPATLENAVNTAREFAAKD 322 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 G I + I+A+GSGLSR N I + MM+VL+ + L Y+ + Y Sbjct: 323 LG--IKDLIVAEGSGLSRKNRITASQMMKVLRAFQPYQT---------LMHYEDGVWY-- 369 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 KTG+L GV L G+I Sbjct: 370 -------------KTGTLHGVRTLVGYI 384 >UniRef50_D0WMC5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WMC5_9ACTO Length = 447 Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 7/195 (3%) Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 AG EL G+ SG++ R+ Q + AS +SAP+ DL+ MLK SDN A+ + Sbjct: 235 AGQAFAKELAARGVPVSGSV-RRGQAPKQAREAASVESAPVRDLVDFMLKHSDNTTAEIL 293 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 +I + P ++ A L++ GV +I D SGLS N ++ + + +++ Sbjct: 294 GHLIA-VKSGEPASFEGAGRATLADLKK-IGVKASGVVIDDNSGLSPKNRLSASLLNEIV 351 Query: 375 QYIAQ-HDNELNFI-SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 +A + L I S P++ DG+L R +H + GKV AKTG+L +L+GF+ Sbjct: 352 GKVASCYGCALESIASGFPVSALDGTLDDR--MHGSAAAGKVRAKTGTLSNAASLSGFLE 409 Query: 433 TASGQRMAFVQYLSG 447 T +G+ + F + G Sbjct: 410 TKNGRLLTFSILIDG 424 >UniRef50_Q2J4Y5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Frankia sp. CcI3 RepID=Q2J4Y5_FRASC Length = 483 Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 56/159 (35%), Positives = 92/159 (57%), Gaps = 7/159 (4%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 VA+ S P+ L++ ML +SDN +A+++ R++ H R +P ++ + AVR +L +AG+ Sbjct: 275 VAAVYSPPVRVLVERMLTQSDNDLAESLGRLVAH-RRGLPASFTGATRAVRDVL-AEAGL 332 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQ--YIAQHDNELNFISMLPLAGYDGSL--QYR 402 + +AD SGLS NLI P T++ +L+ + ++ LP+AG+ G+L +Y Sbjct: 333 PVAGMALADVSGLSIANLIMPMTLVAILRAAVLPGRPALRTILTGLPVAGFSGTLGDRYT 392 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G G G V AKTG+L V +LAG + A G+ + F Sbjct: 393 TGDTAIGA-GDVRAKTGTLHNVSSLAGQLVDADGRLLLF 430 >UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Rhodobacterales RepID=A9DV35_9RHOB Length = 510 Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 107/402 (26%), Positives = 160/402 (39%), Gaps = 59/402 (14%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS+ K ITAL AL QLGPD F T L G V NG ++GDL+ G DPTL ++ M Sbjct: 69 PASSIKAITALYALDQLGPDHVFETRLLATGGVVNGEVQGDLILVGGGDPTLDSDNLGKM 128 Query: 120 VATLKKSGVNQIDGNVLIDT----SIFASHDKAPGWPWNDMTQCFSAPPAAAIV------ 169 LK++G+ + G + S FA + P P + I Sbjct: 129 AEELKEAGIIGVKGKFKVYEGSLPSTFAIDPEQP-------DHVGYNPGVSGIALNYNRV 181 Query: 170 ------DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 D N + V++ R A Y P + + + R Y Sbjct: 182 HFEWKRDGNGYDVTMEG----------RAARYAPAVRAASMEVVDRSGPVYTYENRP--- 228 Query: 224 GDLNRFTLT----GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ 279 D + +T+ G R P ++ YAG + + GI L + Sbjct: 229 -DRDVWTVAKSALGSGGARWLP------IRRPGVYAGDLFATIARSHGIKLGDAELAEAL 281 Query: 280 VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI 339 G + + +SA L +LK ML+ S N+ A+ V R + RA + + + Sbjct: 282 PE--GETLVTHRSAKLQPILKDMLEYSTNLTAEMVGMAASSKRLGTVASLRASAAEMNKW 339 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL 399 ++ G++ N + D SGL + + M L I H L I + P+ L Sbjct: 340 AVEELGME--NPAMVDHSGLGDDSKMTVHDMAGGLARI--HGTGLRPI-LKPV-----YL 389 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + G Q K+ AKTG+L V LAGF+TT + +AF Sbjct: 390 RDDRGRPQTNGPIKIDAKTGTLNFVSALAGFLTTPEDRVLAF 431 >UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWS1_9RHOB Length = 499 Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 106/402 (26%), Positives = 176/402 (43%), Gaps = 51/402 (12%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K ITAL A LGP RF+T + ++G NGV++GD++ G DPTL + +M Sbjct: 88 PASVAKAITALYAWENLGPGHRFSTRVLSEGQTNNGVVQGDIMLVGGGDPTLDTDGLFDM 147 Query: 120 VATLKKSGVNQIDG--NVLIDT--SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 A +KK GV + G V D+ IF DK D + PA A ++ N F+ Sbjct: 148 AAKMKKGGVRGLSGKFKVYADSIPEIF-QIDK-------DQPKHVGYNPAIAALNLN-FN 198 Query: 176 VSLYSAPKPGDMAFI----RVASYYPVTMFSQV----RTLPRGSAEAQYCELDVVPGDLN 227 + + G + R ++ P F+++ R LP + + Q G + Sbjct: 199 RVYFEWKRNGSGHSVTMDARGRNHRPAVSFAKMTIKNRKLPTYTYKDQ--------GGRD 250 Query: 228 RFTL-TGCLPQ-RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP-- 283 ++T+ +G L + LP+ V Y + + + GI L + +N P Sbjct: 251 QWTVASGALGKGGGRWLPVRRPV----VYTAEVFRTFARSHGI----DLPKPEYINGPAP 302 Query: 284 -GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 G V+ + SA L +++ ML+ S N+ A+ V A G+ RA ++ + +++ Sbjct: 303 IGGVLVERPSADLRNIMTGMLRYSTNLTAEIVGLAATQASGGKAGSLRASANEMSAWMQR 362 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 + G + D SGL + I+ M+ VL+ +N + + ++ Sbjct: 363 RLGNK--RAKLEDHSGLGDGSRISAHDMVNVLRSSGTDGPLINIMK-------EYGIRDA 413 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 G A V AKTG+L V LAG+I G+ + F + Sbjct: 414 KGRPLANQPADVVAKTGTLNFVSALAGYIRQKDGRILTFAIF 455 >UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C315E5 Length = 458 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 112/431 (25%), Positives = 169/431 (39%), Gaps = 88/431 (20%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVAR----- 104 D S ++ L AS K+ T ALI+LG D R TT + G GDL R Sbjct: 70 FDDRSDRLRLSASVTKLYTTSTALIELGSDTRLTTHVLGVGRRSGATWSGDLYLRGAGDF 129 Query: 105 -----------FGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 +G+D +++R + A L++SG+ + G VL D S++ Sbjct: 130 TFGTAAFARKAYGSDASVER-----LAAELRRSGLRHVTGRVLGDASLYRD--------- 175 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 N T+ F + L + P F R Y F R +P G Sbjct: 176 NGGTE---------------FPLVLCADP-----LFGRGCPYGVAGAFE--RPIPNGPR- 212 Query: 214 AQYCELDVVPGDLNR--FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 P NR T PQR A++A + L L+ AGI Sbjct: 213 --------TPIGFNRGLRDATSAAPQRRP-----------ATFAASGLTRALRDAGIRVD 253 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 G+ + +AS +S L ++ K SDN AD R++G AR G+ Sbjct: 254 GSAG-TARTPARARTLASTRSPAFARLAALINKPSDNYAADATLRLVG-ARVAGDGSRAG 311 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 G+ V + + G+ I GSG + + +P ++ +L+ + + F L Sbjct: 312 GARVVSRTIADTFGL---APAIRSGSGETLTDRTSPRQLVGLLRGMRERPEGRAFARSLS 368 Query: 392 LAGYDGSLQYRAGLHQAG----VDG-KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 AG DG+L+ AG G DG +V AK N+ G+ T+ SG+R AF L+ Sbjct: 369 RAGRDGTLRRFAGTVAEGRCQLKDGTRVDAK--QANSTLNMTGYCTSVSGKRFAFAVMLN 426 Query: 447 GYAVE--PADQ 455 G +E P D+ Sbjct: 427 GMRMEFVPPDR 437 >UniRef50_C7PWZ8 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Actinomycetales RepID=C7PWZ8_CATAD Length = 508 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 71/192 (36%), Positives = 100/192 (52%), Gaps = 13/192 (6%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G +A S L +L++ ML SDN +A+++ R + A P T+ G AVR L + Sbjct: 310 GAELARVTSPRLANLVEHMLTVSDNDLAESLLRHVALADSK-PATFDGGVAAVRDQLGKL 368 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNF-ISMLPLAGYDGSL-- 399 G+D+ + DGSGLSR + I PA ++VL A D+ EL ++ LP+AG+ G+L Sbjct: 369 -GLDLTGLNVLDGSGLSRKDSITPAFEVKVLSTAAADDHPELRAALTGLPVAGFTGTLDE 427 Query: 400 --QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 +Y AG G V AKTGSL GV LAG + +SGQ + F S A E D Sbjct: 428 DGRYTTAPSLAGA-GLVRAKTGSLTGVVTLAGLVRDSSGQLLVF----SLMADEATDSTA 482 Query: 458 RRIPLVRFESRL 469 R + R + L Sbjct: 483 ARAAVDRLATTL 494 Score = 43.5 bits (101), Expect = 0.020, Method: Compositional matrix adjust. Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 3/82 (3%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G ++ + V + A D H+ PAST KV+TA+AAL LGPD RF T + +G Sbjct: 116 GKHVGIAVADPASPALLFDEHAADGFAPASTNKVVTAVAALSALGPDDRFATRV-VQG-- 172 Query: 93 ENGVLKGDLVARFGADPTLKRQ 114 + +V G DPTL Q Sbjct: 173 PDSAATPTIVLVGGGDPTLSTQ 194 >UniRef50_C8RSC7 PBP4 family D-alanyl-D-alanine carboxypeptidase, serine-type n=2 Tax=Corynebacterium jeikeium RepID=C8RSC7_CORJE Length = 444 Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 55/157 (35%), Positives = 84/157 (53%), Gaps = 8/157 (5%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 +AS QSAPL+ L+ ML SDN++A+ + R I ++ P T+ + A +L++ G+ Sbjct: 267 IASVQSAPLNVRLRDMLVHSDNIMAEAIGREIAKSQGE-PHTFEGATSATLDVLKEH-GI 324 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLH 406 D + + D SG+S N + + VL D + MLP+A +G+L+ R G Sbjct: 325 DTKDATLFDNSGMSEKNRLTAHELDGVLSNKEVRD----ILDMLPVASVEGTLEARYGSG 380 Query: 407 QAGVD--GKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 D G V AKTG+L GV LAG + T SG+ + F Sbjct: 381 SGSEDSAGWVRAKTGTLSGVNALAGTVMTDSGRALTF 417 >UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKK1_9CAUL Length = 506 Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 91/330 (27%), Positives = 145/330 (43%), Gaps = 27/330 (8%) Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 G+V+ D ++ + PGW W DM + F +A V+ N V L +P A ++ Sbjct: 160 GDVVGDDRLYPDERRGPGWAWEDMQEGFGTAVSALTVNDNI--VVLQVSPVQTAGAPVQA 217 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 A + V T + ++ PG+ + L G +P S+ + L + D A Sbjct: 218 AWRAGDDLLPLVNTAVTVAVGETDLRVERRPGE-DVVRLYGQMPTGSDAVALRVGLDDPA 276 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQ----------------VNEP-GTVVASKQSAPL 295 A + L+ G+T GT+ + + V++P G VA PL Sbjct: 277 LTAALRFRRLLEARGVTVEGTVRARHRPLELSDDPTRGDSLPPVDQPDGVEVARLARPPL 336 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW-RAGSDAVRQILRQQAGVDIGNTIIA 354 L + S N+ A+ + + GT RA A + + AG++ + Sbjct: 337 LASLNRTARFSQNLHAELLL----RRLGRLDGTGARAEGLAQVEAVMATAGLERAAFDLY 392 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLS +N I+P L + ++ + + LP+AG G+L R ++G+V Sbjct: 393 DGSGLSAYNRISPRATTTFLVWTSRQPWGEAWRATLPVAGQAGTLLRR--FAGTPLEGRV 450 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 AKTGSL GV LAGF+T ASG+ +AF Y Sbjct: 451 FAKTGSLNGVNALAGFLTAASGRTVAFSIY 480 >UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=Dictyostelium discoideum RepID=PSCA_DICDI Length = 522 Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 98/418 (23%), Positives = 172/418 (41%), Gaps = 72/418 (17%) Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETK-----GNVENGVLKGDLVARFG-ADP 109 Q PAS K+ T ++ G DF+ T T + + + D + G DP Sbjct: 88 QAFTPASNTKLFTTISIFYTFGEDFKVFTPFFTDKPFNSVSGGSSNSELDFICVKGMGDP 147 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG-----WPWNDMTQCFSAPP 164 ++ ++ + + +L+DTS + + G W W D+T + + P Sbjct: 148 SMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFYNIGNGVDGNIPSAWEWEDLTSTYGSIP 207 Query: 165 AAAIVDRNCFSVSLYSAP------KP-GDMAFIRVASYYPVTMFSQVRTLP--------- 208 I++ N ++ +Y P KP + Y PV + + T Sbjct: 208 TPLIINEN--TMDIYITPSNVIGGKPTASFKYSGEDKYLPVIILATTTTTSNSSTSTLNY 265 Query: 209 --RGSAEAQY----CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 + S+++ Y C+++ G + T+ P++ + ++DG E Sbjct: 266 SFKMSSQSIYITGNCDIN---GGIQIITVPILDPEQYFLTVFSALLEDGGV--------E 314 Query: 263 LKQAGI---TWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 + Q I ++G + +V P L ++L L S+N+ A+T R +G Sbjct: 315 ISQTAIGSCNYTGMDYKSFEVISP----------ELSEMLNYTLLTSNNLYAETFLRQMG 364 Query: 320 H----ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 A + P T++AG + ++Q L + DGSGLSR+N I P +++ V++ Sbjct: 365 TFNSAASESTP-TYQAGLEYIQQTLSIPTSLYTQ----VDGSGLSRNNFITPKSLITVIE 419 Query: 376 --YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 Y D + ++IS LP+A G+L R G V AKTGS+ GV +L G I Sbjct: 420 NVYTNVGDPQHDYISYLPVASLSGTLSKR--FINTPASGIVHAKTGSMTGVNSLTGVI 475 >UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Corynebacterium RepID=C0WGS1_9CORY Length = 451 Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 56/165 (33%), Positives = 89/165 (53%), Gaps = 10/165 (6%) Query: 283 PGTV------VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 PGTV +AS +SAPL + M++ SDN++A+ + R + AR P +++A + A Sbjct: 265 PGTVTEGAEELASVESAPLSERALEMVRHSDNVMAEAIARELADARGKQP-SFQADTQAT 323 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 +LR+ G D+ I D SGLS N ++ + + +++ + + LP+AG D Sbjct: 324 LDVLREH-GFDVSGVDIKDNSGLSVDNRLSASVLAEIVNGAVEEPQLRPLAAYLPVAGGD 382 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G+L R G ++ G V AKTG+L GV LAG SG+ +F Sbjct: 383 GTLHERYG--ESAARGFVRAKTGTLTGVSALAGTAQGQSGRVYSF 425 >UniRef50_A0R596 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=32 Tax=Corynebacterineae RepID=A0R596_MYCS2 Length = 480 Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 6/162 (3%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 GT +A QSAPL + L+ M+ +SDN++A+++ R + A P ++ AV LR Sbjct: 292 GTTIAEVQSAPLIERLRQMMNESDNVMAESIAREVAEA-LGRPQSFEGAVGAVLTQLR-S 349 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL--NFISMLPLAGYDGSLQY 401 G+D + D SGLS N + T+ +V+ A H + +LP+AG G+L Sbjct: 350 VGIDTSGAKLVDSSGLSVDNRLTALTLDEVVNAAAGHTQPALRPLVDLLPIAGGSGTLSN 409 Query: 402 RAGLHQAG--VDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 R AG G + AKTGSL G LAG +T SG+ + F Sbjct: 410 RYLDTDAGRAAAGWLRAKTGSLTGTNALAGIVTDRSGRVLTF 451 >UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQK2_SACVD Length = 517 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 118/441 (26%), Positives = 187/441 (42%), Gaps = 87/441 (19%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A +D+ +T G L +V + + ++ Q PAST K++T+ AAL+ L D Sbjct: 128 AAIDDLVTDPALGTLLGSVVDPATGTT-LWERNADQALAPASTTKLLTSAAALLVLDHDM 186 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 RF T V G G +V G D TL ++L + + S Sbjct: 187 RFPT------KVVAGAEPGTVVLVGGGDVTL---------SSLPEG-----------EES 220 Query: 141 IF--ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG-DMAFIRVASYYP 197 IF A+H +D+ + V R +S ++ P G D A V S Y Sbjct: 221 IFPGAAH-------LDDLVEQVREA-TGGQVSRVELDLSAFTGPTEGRDWAPEDVPSTYM 272 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 V + Q LD G T G + RS+P AG Sbjct: 273 V--------------QTQPVMLD---GGRTDPTDEGSM-GRSDP-------------AGH 301 Query: 258 ILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 +++ ++ G GT T E V+ S P+ +L+++ L +SDN++++ + R Sbjct: 302 LVETFAERLGAEAGGT----TTAPEGAKVLGEVWSPPVDELVRVALVESDNLVSEVLARQ 357 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 + A P ++ ++A ++L + GVD+ + DGSGLS N I PAT+ Q+L Sbjct: 358 VAIAEGKQP-SFEGAAEATLEVLSRH-GVDVTGVELNDGSGLSPSNRIPPATLTQLLAMA 415 Query: 378 A--QHDNELN-----FISMLPLAGYDGSL--QYRAGLHQAGVDGKVSAKTGSL--QGVYN 426 A DNE+ + LP+AG G+L +Y G G G V AKTG++ + V+ Sbjct: 416 ASPDTDNEVTVKLRPLLDGLPVAGGSGTLSTRYDQGPATQG-RGWVRAKTGTIPVERVHT 474 Query: 427 LAGFITTASGQRMAFVQYLSG 447 LAG + T + + F +G Sbjct: 475 LAGVVLTEDDRVLVFALMSNG 495 >UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FDCA Length = 485 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 10/196 (5%) Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPG-----TVVASKQSAPLHDLLKIMLKKS 306 A A A+ ELK AGIT S + G T +A +SA + ++++ L S Sbjct: 262 AKDAFAVFTKELKAAGITVSKDPQPADATDATGDEAKPTELAEVESATISEIVEYALVHS 321 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 DN++A+ + + A+ PG+ AG AV L VD+G T + D SGLS N I+ Sbjct: 322 DNVVAEVLGNEVAIAQGE-PGSLEAGPQAVLDALSDT--VDLGQTHLEDTSGLSYDNQIS 378 Query: 367 PATMMQVLQYIAQHDNEL-NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 P + +LQ D+ L + I+ +P+ G G+L R + G V AKTG+L V Sbjct: 379 PHDLTTILQASVVADDSLSDLIAAMPVGGLTGTLTDRFTKDRNAA-GAVHAKTGTLSTVT 437 Query: 426 NLAGFITTASGQRMAF 441 +LAG + A G+ + F Sbjct: 438 SLAGGVLDADGRYLVF 453 >UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HI4_THICR Length = 415 Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 104/428 (24%), Positives = 178/428 (41%), Gaps = 90/428 (21%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 + ++ E ++QL L L Q+ P I+ + ++ +PAST K++TA AL G D Sbjct: 27 SVSLKEALSQLHETGVLMLNAQQ----EPVIEKDASKLRVPASTTKLVTAYLALKHWGAD 82 Query: 80 FRFTT----TLETKGNVENGVLKGDLVARFGADPTLKRQDIR----NMVATLKKSGVNQI 131 +RF T T T G L + DP L ++I+ N+ LK SG+ + Sbjct: 83 YRFKTDFYITRTTHGT-------SSLWVKGYGDPFLVSEEIQKLAENLAYRLKASGIKTV 135 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 D +++DT F ++ PG ++ + A P A + N +LY G A + Sbjct: 136 D-EIILDTGYFETNVVLPG--RSNTDNPYDAIPGALAANFN----TLYLKKVRG--AIVS 186 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 P+T P A ++ L RF L G + G Sbjct: 187 AEPQTPLT--------PLAVALGKHTNLKH-----GRFNLGGN-------------AKTG 220 Query: 252 ASYAGAILKDELKQAGIT------WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 Y +L L+++GI W +L Q + E S L ++++ M++ Sbjct: 221 ERYFAELLSVFLQRSGIAVAQNVKWR-SLNHQQDLKESPPFYRHLNSLTLAEIIQPMMRY 279 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG--NTIIADGSGLSRHN 363 S N IA+ + + R VP A + V+Q++R +G + + DG+GLS N Sbjct: 280 STNFIANQLALKLSAERLGVP----ASPEKVKQMMRTDLTHYLGWQDFYLEDGAGLSHQN 335 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 ++P ++ +L+ + S+LP ++ ++ AK+G+L G Sbjct: 336 RLSPQQLVVLLEAFRP------WKSLLP-----------------EIEDQIFAKSGTLIG 372 Query: 424 VYNLAGFI 431 V LAG+I Sbjct: 373 VSTLAGYI 380 >UniRef50_A8LF22 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Frankia RepID=A8LF22_FRASN Length = 495 Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 7/159 (4%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 V S QS P+ L++ ML SDN +A+++ R + AR +P ++ + V LR AG+ Sbjct: 294 VGSVQSPPIPVLVERMLTDSDNDLAESLGRQVAIAR-GLPASFDGATRGVLGALRD-AGI 351 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--QHDNELNFISMLPLAGYDGSL--QYR 402 + D SGLS N IAPAT++ L+ A H +S LP+AG+ G+L +Y Sbjct: 352 PTDGASLRDTSGLSIDNRIAPATLVAALRTAALPGHPALRTVLSGLPVAGFTGTLGDRYG 411 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G G G V AKTGSL+ V +LAG +T + G+ + F Sbjct: 412 PGDTSPGA-GVVRAKTGSLRIVTSLAGMVTDSDGRLLLF 449 >UniRef50_D2PYA1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2PYA1_9ACTO Length = 456 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 5/153 (3%) Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +SAP+ DL++ + SDN A+ + R +G A N G++ G +R L + G+++ Sbjct: 274 RSAPVGDLVEHVNLHSDNDGAEVLLRHVGLATKN-GGSYAGGLKGLRSTL-TKLGLNVTK 331 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF-ISMLPLAGYDGSLQYRAGLHQAG 409 + DGSGLSR N + P ++ +A EL + IS LP+AG+ GSL+ R + AG Sbjct: 332 ARLEDGSGLSRTNQV-PLDVLAGAVRVAVSRPELRYLISGLPVAGFTGSLEERFAVPGAG 390 Query: 410 VD-GKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G V AKTG+L GV++LAG + + +G + F Sbjct: 391 AGTGLVRAKTGTLTGVHSLAGLVRSRTGTLLVF 423 Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust. Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 19/141 (13%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 V VGA+ P + PAST K++T +AAL LGPD F+T G+ V G Sbjct: 93 VYSVGAAKPFV---------PASTLKLLTTVAALEALGPDHWFSTRTVRAGSSLVLVGGG 143 Query: 100 D--LVARFGADPTL--KRQDIRNMVATLKKS----GVNQIDGNVLIDTSIFASHDKAPGW 151 D L + ADP +R ++++ A+ KS GV I + D S+F W Sbjct: 144 DPLLTIKRSADPLEFPRRATLQDLAASTAKSLRAGGVTSI--TLGYDASLFTGPAANAKW 201 Query: 152 PWNDMTQCFSAPPAAAIVDRN 172 N + + + P +A VD+ Sbjct: 202 EPNYVPEGIAGPTSALWVDQG 222 >UniRef50_D1Y0J6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0J6_9BACT Length = 446 Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 9/183 (4%) Query: 262 ELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF-RMIG 319 +L+Q GIT SG RQ N + + + D++ M+K SDN+ A+++F ++ Sbjct: 244 KLRQNGITIDSGYGTRQYPSNAQNIITTTH---SIGDVMHHMMKASDNLYAESMFYQLAS 300 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + N + ++Q++R+ G++ N IADGSGLS +N + +++L+Y Q Sbjct: 301 NGGINKHASANNARIYIQQLIRK-LGLNPSNYKIADGSGLSLYNYLTAELEVKLLRYAYQ 359 Query: 380 HDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + + N + LP+AG DG+L+ R + V AKTG++ GV +LAG++T A+G Sbjct: 360 NPDIYNTLLPTLPIAGVDGTLRKR--MRNTPAARNVKAKTGTVVGVTSLAGYLTAANGHL 417 Query: 439 MAF 441 + F Sbjct: 418 ICF 420 Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 3/106 (2%) Query: 53 HSQQMAL-PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV--LKGDLVARFGADP 109 H++Q+ L PAST K +TA+AAL +LG + + T+L GN+ + L+GDL G DP Sbjct: 116 HNEQLHLRPASTMKCVTAIAALDKLGSSYTYKTSLYYTGNLVDSTQTLEGDLYIVGGMDP 175 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 + ++ +VA +K G+N I G + D S S GW W+D Sbjct: 176 MFRATEMNQLVAAIKNLGINHITGTLYADLSFKDSKQFGRGWCWDD 221 >UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CXB9_METMJ Length = 531 Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 121/486 (24%), Positives = 196/486 (40%), Gaps = 82/486 (16%) Query: 19 QAANVDEYITQLPAG--------ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 +AAN E+ ++ A A +M + + + ++ P ST KV T Sbjct: 47 EAANATEFKERIDAVISQERYDYATWGMMARDTSTGEVLLSMNGDRLFTPGSTTKVFTVS 106 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLV--ARFGADPTLKRQD------------- 115 AL LGPD+RF T + G+ V GDL R G + TL + Sbjct: 107 TALDVLGPDYRFRTPVYRVGDDLVLVASGDLAMGGRAGPNGTLAFTNEDHGDARAFGDCL 166 Query: 116 ---------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 + N+ + +G+ +D +V++D +F M++ P Sbjct: 167 LVDADPLAGLENLAEQVAAAGITAVD-DVIVDDRLFCETQM--------MSEGLVTP--- 214 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYP----VTMFSQVRTLPRGSAEAQYCELDVV 222 +V+ N V++ PG A + P T+ S+V T GS A + Sbjct: 215 IVVNDNLIDVTIV----PGREGEPATADWRPRSSAYTIESRVVTGAPGSDPAV-----AI 265 Query: 223 PGDLNR--FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV 280 P + +TG +P + P+ L V+ A++A ++ D L+ AG+ + Sbjct: 266 PAYTGQALIEVTGTVPADAGPVNLTSNVEIPAAFARSLFIDALENAGVAVVAPAAGENPS 325 Query: 281 ----NEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMI-GHARFNVPGTWRAGS 333 +E G+V VA S P + K+ LK S N+ A+ + +I H ++ T AG Sbjct: 326 GRLPDEYGSVGRVAELVSLPFSEYAKVTLKVSQNLYANCLLGIIAAHEGYD---TVEAGL 382 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 V ++ GV+ ++ADG G S N I+P + Y+A D LP+ Sbjct: 383 -FVEGAFLEEIGVNPDTLLLADGEG-SIVNRISPLAATDLAAYMAGTDLYAPLSDALPVL 440 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQG----------VYNLAGFITTASGQRMAFVQ 443 G DG+L A G G + AKTG+ G L G++TTA G + F Sbjct: 441 GVDGTLAANAKPGDPGY-GAIRAKTGTSAGGDQQGGIFLYTRGLLGYMTTAKGTPVTFAI 499 Query: 444 YLSGYA 449 Y++ A Sbjct: 500 YVNNIA 505 >UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGG4_KOCRD Length = 522 Score = 77.8 bits (190), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 106/434 (24%), Positives = 170/434 (39%), Gaps = 80/434 (18%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG-NVENGVLK 98 V ++GA P + +PAS QK+++ALA +G R TT+ + G V Sbjct: 142 VGELGADGPVAGREQARPVVPASNQKLLSALAVAEHVGAQDRLVTTVVSGGPGALTLVAG 201 Query: 99 GD-LVARFGADP----------TLKRQDIRNMVATLKKSGVNQIDG--NVLIDTSIFASH 145 GD ++A DP TL R+ R L++ + + G V +DTS+FA Sbjct: 202 GDTMLAPGQGDPAAVNGHAGLGTLARRTAR----ALEQRSPDGVPGAVEVTVDTSLFAGP 257 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 D P W D+ A ++ P+ ++S Sbjct: 258 DLNPAWEKEDV-------------------------------ASGEISRVAPIALYSHRV 286 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 G+ PGD R +E F+ Q L+ EL Sbjct: 287 PAADGTD----------PGDRGRRPADPAGEALAE-----FSRQ---------LQKELGD 322 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 A +T GT + E T +A +SAP+H+ ML SDN +A+T+ R + AR Sbjct: 323 AAVTARGT----ARAPEGATELARVESAPVHEQSAYMLAHSDNSLAETLTR-VAAARSGR 377 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 + D + LR+ G+D + D SG++ N + AT+ + + + Sbjct: 378 EASVAGVQDLLPAALREH-GIDTSGLRVLDASGMAPGNRVTAATLARAVDTLLTEPRFGP 436 Query: 386 FISMLPLAGYDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + LP+AG G+L R + G AKTG+L V L+G++ G + + Sbjct: 437 YGRGLPVAGGTGTLAERFDDPAEQPARGVARAKTGTLLDVVALSGYVQREDGAVLVYAVV 496 Query: 445 LSGYAVEPADQRNR 458 L+G A ++R Sbjct: 497 LNGVTGHTARAKDR 510 >UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Actinomycetales RepID=A6W5C7_KINRD Length = 478 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 12/185 (6%) Query: 271 SGTLLRQTQVNEPGT-VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 +G ++R V PG +AS +SA + +++ML SDN +A+ + R + A + P T+ Sbjct: 276 AGPVVRAAAV--PGAATLASVESATTAEQVELMLTASDNTLAEVLTRRVALA-ADRPATF 332 Query: 330 RAGSDAVRQILRQQA--GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--QHDNELN 385 DA R ++ Q A GVD+ T + GSGL R + + VL +A +H Sbjct: 333 ---DDASRAVVDQVAALGVDVTGTSLQGGSGLGRATRVPARVVTDVLTLVAGGEHPELGA 389 Query: 386 FISMLPLAGYDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + LP+AG G+L R A A G V AKTG+L GV +LAG++ A G+ +AF Sbjct: 390 AAAGLPVAGVSGTLLERYAEPGSASAAGVVRAKTGTLTGVSSLAGYVRDADGRLLAFAVM 449 Query: 445 LSGYA 449 G A Sbjct: 450 SDGVA 454 >UniRef50_A0LRB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidothermus cellulolyticus 11B RepID=A0LRB4_ACIC1 Length = 496 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 56/158 (35%), Positives = 83/158 (52%), Gaps = 5/158 (3%) Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 V+A QS L DL++ ML SDN +A+ + R + AR +P ++ + A+R L G Sbjct: 309 VLAVVQSPTLADLVRQMLTVSDNDLAEAIARQVAIAR-GLPASFAGATQAIRDTL-NDLG 366 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR--A 403 +D I+D SGLS + + P + +L+ + +D LP+AG G+L R A Sbjct: 367 IDTSGLTISDASGLSTLDRLQPRMLTALLRLVLTNDRFSAVREGLPVAGLTGTLASRFTA 426 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 GV G V AKTG+L V LAG+ T G+ +AF Sbjct: 427 PAAAPGV-GVVHAKTGTLATVVTLAGYTTDYDGRVLAF 463 >UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Corynebacterineae RepID=A3Q701_MYCSJ Length = 462 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 57/164 (34%), Positives = 91/164 (55%), Gaps = 10/164 (6%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ- 342 G +A+ QS PL + L++M+ SDN++A+ + R + A+ P ++ DA + +L Q Sbjct: 274 GRQIAAVQSPPLMERLRVMMNLSDNVMAEAIGREVA-AQLGRPQSF---DDAAKAVLAQL 329 Query: 343 -QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELN-FISMLPLAGYDGSL 399 +AG+D + D SGLS + + T+ V+ A D+ EL + +LP+AG G+L Sbjct: 330 RKAGIDTTGARLFDSSGLSVDDRLTARTLDDVITAAAGDDHPELRPLVDLLPIAGGSGTL 389 Query: 400 QYRAGLHQAGVD--GKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 R AG + G + AKTGSL G +LAG +T A G+ + F Sbjct: 390 SNRYLDTAAGREAAGWLRAKTGSLTGTNSLAGIVTDARGRVLTF 433 >UniRef50_A1SDU6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Nocardioides sp. JS614 RepID=A1SDU6_NOCSJ Length = 460 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 8/170 (4%) Query: 277 QTQVNEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD 334 Q + P V +A S PL +++ L SDN A+ + R +G A G++ G+ Sbjct: 262 QREAAAPADVAELARTDSLPLDRIVEHTLATSDNEAAEVLARHVGLATSGD-GSFAGGAR 320 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--QHDNELNFISMLPL 392 A+ ++L GV T DGSGLSR + + P T+ VL+ A + + ++ LP+ Sbjct: 321 ALLRVL-DGLGVPTQGTTTYDGSGLSREDRLDPDTLTAVLELAASPEQPDLRAVLTGLPV 379 Query: 393 AGYDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 AG+ GSL R AG G G V AKTG+L GV +LAG +T G+ M F Sbjct: 380 AGFTGSLTERFAGPDDQG-RGLVRAKTGTLSGVSSLAGIVTDREGRPMVF 428 >UniRef50_A7HML0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HML0_FERNB Length = 395 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 2/128 (1%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 ++ P + + + Q + + Y+ + +PAS K+ + L A LGPDFR+TTT+ Sbjct: 32 SKAPLSSYVGVYFQDIENGNVLVQYNEHNLYVPASITKIFSTLVAWEVLGPDFRYTTTVY 91 Query: 88 T-KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 +GN+ + G ++ + DP++ + +R + GV +I G+++ID S F++ Sbjct: 92 VPRGNIS-PTINGSIIIKGNGDPSMSVEILRENLKKFVYEGVKEIKGDIIIDNSFFSNER 150 Query: 147 KAPGWPWN 154 GW W+ Sbjct: 151 WGIGWEWD 158 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 54/207 (26%), Positives = 104/207 (50%), Gaps = 16/207 (7%) Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG--- 319 LK+ GI G + + ++N+ +S PL +L+ + K S N A+ + R +G Sbjct: 196 LKEYGIKVYGNV-KVGKLNQSYREFIVIKSVPLSNLISVANKYSSNSYAEQILRTVGLRV 254 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + N+ + + +D R++ + + D GLS N++ P ++ VL Y + Sbjct: 255 YGYGNIYNSLKVMNDFYRKLFGEYYPFRLN-----DACGLSTKNVVTPYMVVNVLSYAYK 309 Query: 380 HDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 ++ L+ FIS L ++G +G+++ R G D AKTG+LQ V N+AG + T +G++ Sbjct: 310 NEGGLSGFISTLAVSGKEGTMKNRLG------DIIAYAKTGTLQNVSNIAGIMITRTGRK 363 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLVRF 465 +AF ++ + + N ++R+ Sbjct: 364 VAFCIMVNNFTIPTYVVTNYHDEIIRY 390 >UniRef50_C5VM55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Prevotella RepID=C5VM55_9BACT Length = 442 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 16/227 (7%) Query: 220 DVVPGDLNRFTLTGCLPQRSEPL-PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT 278 D+ D +R C ++ L PL +D +Y +L+ G+T +G+ + Sbjct: 201 DLSFKDRDRLGEGWCWDDKNPNLSPLLVDGKDEFTYR---FSRKLEDMGVTLNGST-GER 256 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 Q+ ++ ++ + + +L M+K SDN+ A+++F + GT AG+ RQ Sbjct: 257 QLPTDAQLLTTRTHS-IRQVLHRMMKVSDNLYAESMFYQLAAN----GGTRWAGAKTARQ 311 Query: 339 I---LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN-FISMLPLAG 394 L + G++ + +ADGSGLS +N ++ ++L+Y Q + ++ P+AG Sbjct: 312 YENALFSRIGLNPRDYNVADGSGLSLYNYVSTELETKLLRYAYQRSDIYGAYLEAQPIAG 371 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 DG+L+ R + G V AKTG+++GV +LAG++TT++G + F Sbjct: 372 VDGTLKSR--MRGTAAAGNVRAKTGTVKGVSSLAGYLTTSNGHLLCF 416 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 4/122 (3%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG- 95 ++MV + P + + PAST K +TA+A L +LG D+ F T L G +++ Sbjct: 98 SVMVWDLTDDVPVYQFRERLHMRPASTMKCVTAIATLDKLGADYDFKTNLYYTGVIDDST 157 Query: 96 -VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK-APGWPW 153 VL+GDL G DP L D+ M ++ G+ I+G V D S F D+ GW W Sbjct: 158 QVLRGDLYCVGGMDPMLSSSDLTEMARAVRDLGIKTIEGGVYADLS-FKDRDRLGEGWCW 216 Query: 154 ND 155 +D Sbjct: 217 DD 218 >UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKM6_DESAH Length = 393 Score = 77.0 bits (188), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 95/404 (23%), Positives = 157/404 (38%), Gaps = 98/404 (24%) Query: 56 QMALPASTQKVITALAALIQLGPDFRFTT--------TLETKGNVENGVLKGDLVARFGA 107 Q +PAST K++TAL A +LG +FRF T TL+ KG+ Sbjct: 49 QAFVPASTFKLLTALGAFNELGENFRFKTKFFLGPDRTLKIKGS---------------G 93 Query: 108 DPTLKRQDIR----NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW-----PWNDMTQ 158 DP + + + ++ + L K GV+ I +++D F + PG P++ Sbjct: 94 DPLITSEILEKSCCDLASILLKKGVSTIK-TLVVDNLFFEPDIQIPGTGGSTNPYDAGVN 152 Query: 159 CFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 SA N +VS G + + P+ F++ R L G Sbjct: 153 ALSA---------NFNTVSFRFDKHDGQL--LSGEPQTPLLSFTRPRILASGL------- 194 Query: 219 LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT 278 D R L+ + +YAG ++K L+Q GI G + Sbjct: 195 ------DRGRIVLSRI---------------ESRTYAGRLVKFFLEQKGIKVMGGVEEGQ 233 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 + + + L +L++ +L+ S+N +A+ +F G A F+ P + A+R Sbjct: 234 VLQQDLHIYTHVSPYTLAELVRQLLQFSNNFMANQIFLTAGAAAFSPPASLEKSVGALRA 293 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 G++ N IA+GSG+SR N I+P M++VL H + +N Sbjct: 294 YASNTLGIE--NISIAEGSGISRRNRISPREMLKVLMAFKSHYSLMN------------- 338 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 R + KTG+L GV G+ T + F+ Sbjct: 339 -HERDEFY----------KTGTLDGVRTRVGYFTGKNNSLFPFI 371 >UniRef50_D1QRI9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Prevotella RepID=D1QRI9_9BACT Length = 418 Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 68/219 (31%), Positives = 106/219 (48%), Gaps = 17/219 (7%) Query: 236 PQRSE----PLPLAFAVQDGASYAGA-----ILKDELKQAGITWSGTLLRQTQVNEPGTV 286 P +SE P L+F+ + G Y GA +K+ L+ AGI+ + + G+ Sbjct: 173 PVQSEEHWYPWDLSFS-KYGLFYKGADRITKEVKNALRTAGISVDDKQVVMGRTPR-GSH 230 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 + + +++ M+K S N A + IG+ +AG +R +RQ+ G+ Sbjct: 231 CIFRFYRSIDRVIQRMMKNSSNTQATALLYTIGYKANPHASPVKAGVAYLRAFVRQELGL 290 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI-SMLPLAGYDGSLQYRAGL 405 + +I DG GL HN IAP T+ VL+Y H + L +AG DG+L R L Sbjct: 291 RDSSIVIHDGCGLCTHNQIAPTTLTTVLRYAYNHKPIYRMLHDNLAVAGVDGTL--RREL 348 Query: 406 HQAGVDGKVSAKTGSLQ---GVYNLAGFITTASGQRMAF 441 + GKV AKTG+L G+ +LAG+ A+G +AF Sbjct: 349 SSPVLHGKVRAKTGTLSHPYGISSLAGYCQGANGHLLAF 387 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 2/125 (1%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P GA V + A P + ++ AS K+++ +A L LG + + T+L TKG Sbjct: 61 PRGA-FGFHVYDLTADKPVYGCNENKVQPSASCMKLLSGVAGLHLLGTKYLYATSLYTKG 119 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 +G KGD+ + G DP L D+ L++ GV ++DG ++ID I Sbjct: 120 TATDGTFKGDISFKAGLDPQLNGPDLVMFAKALRRKGVQKLDGRLIIDLVISDPVQSEEH 179 Query: 151 W-PWN 154 W PW+ Sbjct: 180 WYPWD 184 >UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NF89_CORDI Length = 426 Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 59/160 (36%), Positives = 82/160 (51%), Gaps = 16/160 (10%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G VVA+ +S L + M++ SDN++A+ + R I A V T R IL + Sbjct: 255 GEVVATTESEALEKRISQMMQHSDNVMAEAIGREI-DATQPVQATLR--------ILSEH 305 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 G+ IG + +AD SGLS HN I PA + QV + I LP+AG G+L R Sbjct: 306 -GITIGASEVADNSGLSLHNRITPALLTQVATKAVTDPEVHSLILALPVAGGSGTLADR- 363 Query: 404 GLHQAGVDGK--VSAKTGSLQGVYNLAGFITTASGQRMAF 441 A +DG+ V AKTG+L GV L G + + SG +F Sbjct: 364 ---YAELDGRGWVRAKTGTLTGVSALVGVVPSTSGHIYSF 400 Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust. Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 19/109 (17%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD---LVARFGADPTLKRQDI 116 PAS K++TA AAL +LGP+ R TT V+K D +V + D L + + Sbjct: 112 PASATKMLTATAALYELGPEHRITTE----------VIKQDDHTVVIKAAGDVWLTDERL 161 Query: 117 RNMVATLKKS--GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 + +K+ VN VL+DTS ++ GW +D+ + AP Sbjct: 162 DQLARKIKEQMPSVN----TVLVDTSAWSGDKILGGWDPDDVNAGYVAP 206 >UniRef50_C8NYS1 Penicillin-binDing protein, d-ala-d-ala carboxypeptidase (Fragment) n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NYS1_9CORY Length = 393 Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 11/155 (7%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G VVA+ +S PL + L+ M+K SDN++A+ + R I AR + +A DA+ + Sbjct: 247 GEVVATVESPPLTERLRDMMKDSDNVMAEAIGREIARARGGT--SPQATLDAL-----TE 299 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGYDGSLQYR 402 G +I +AD SGLSR +LI P + V+ A NEL + ++ L +AG DG+L R Sbjct: 300 HGFNINGVTLADSSGLSRFDLIPPRLLDDVM-VRATSTNELRDLLTTLAVAGGDGTLIDR 358 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 G G V AKTG+L G L G +T+ +G Sbjct: 359 YGDLSG--RGWVHAKTGTLTGTSALVGTVTSKAGN 391 >UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F2A Length = 431 Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 94/178 (52%), Gaps = 23/178 (12%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 +AS S P+ L ++ L SDN++A+ + + +G A F G+ AG+ R L + G+ Sbjct: 238 LASIPSLPMSTLARLTLVPSDNLLAEMLLKGVG-ASFGTAGSTAAGATVARSTL-SRFGI 295 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLH 406 + +ADGSGLSR N +P QV+Q + ++ F S +P+AG G+L R Sbjct: 296 ---SPRLADGSGLSRANATSP---RQVVQLLDGMRDQAGFRSGMPVAGRSGTLMKR---- 345 Query: 407 QAGVDGKVS-----AKTGSLQGVYNLAGFITTASGQRMAFV---QYLSGYAVEPADQR 456 V G ++ AKTG+L V L G+ +++G ++AF +S YA + A+ R Sbjct: 346 ---VRGTIAQDNCQAKTGTLSNVSALGGYCRSSNGHQIAFAFMFNSVSTYAAKAAEDR 400 Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKR---- 113 +PAS +K+ T AL++ G D T + G +E +G +GDL R DPT Sbjct: 66 IPASVEKLYTTSTALLRYGADGTLDTRVLGSGALEDDGTWRGDLYLRGSGDPTFGSARYT 125 Query: 114 -------QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 + ++ A + ++G+ ++ G V D S F S P Sbjct: 126 QYAFGGGATVTDLAAAVAEAGITRVSGRVYGDESFFDSKRGGP 168 >UniRef50_A8ZL72 D-alanyl-D-alanine carboxypeptidase, putative n=2 Tax=Acaryochloris marina MBIC11017 RepID=A8ZL72_ACAM1 Length = 284 Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 15/148 (10%) Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL+ L + + S+N AD + R +G G R + +R LR ++ + + Sbjct: 117 PLNQQLIEVNRYSNNSEADALLRQVG-------GQRRVNQELMRLGLRPESYIQV----- 164 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DGSGLSR N + P+T++ +L+ + +H + F + LP+AG +G+L+ R + GK Sbjct: 165 -DGSGLSRSNRMPPSTLITLLKAMKRHREGVVFYNSLPIAGVNGTLRNR--FQNTRLHGK 221 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAF 441 + KTG+L+GV L+G++ A +AF Sbjct: 222 LHGKTGTLRGVRALSGYLDNADYGTIAF 249 >UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Rhodobacteraceae RepID=Q28L64_JANSC Length = 493 Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 101/411 (24%), Positives = 165/411 (40%), Gaps = 38/411 (9%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K ++ L +LGP++RF T L + G + +G L GDL DP + M Sbjct: 82 PASVAKTVSCAYGLDRLGPNYRFRTRLVSNGVLADGRLDGDLWLVGSGDPLFDTDALAAM 141 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN-DMTQC--FSAPPAAAIVDRNCFSV 176 L G+ ++ G ++ T W D +Q PA + ++ N F+ Sbjct: 142 ADDLVNMGLREVTGRFMVATGALPEI-------WQIDPSQLPHVGYNPAISALNLN-FNR 193 Query: 177 SLYSAPKPGDMAFI----RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 + + G+ I R AS P +++R R + Y + + + +T+ Sbjct: 194 VHFEWERVGEDYTISMDARSASLRPAVQVARMRVEERTTPVYTYSDAE----SHDAWTVA 249 Query: 233 -GCLPQR-SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 G L S LP V+ A+Y + + + + G+ + E V+A Sbjct: 250 RGALGDAGSRWLP----VRRPAAYMAEVFQTLMGRHGVRLPSPTY-ELSAPETALVLAEH 304 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 S PL ++L+ M++ S N+ A+ V M A + A+ +++ G N Sbjct: 305 VSDPLDEILRGMMRWSTNLTAEVVGLMATQATGQSASSLPESGAAMTAWMQETLGAR--N 362 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 D SGL + I P M L + + +P+ DG++ G Sbjct: 363 ATFVDHSGLGVGSRIRPQDMTHALVSAGSDSLLRDLMKDIPMRDRDGNVIQ-------GH 415 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY---LSGYAVEPADQRNR 458 +V AKTG+L V LAGF SG+ +AF + L P DQR R Sbjct: 416 PIEVVAKTGTLDFVSALAGFARMPSGRDLAFAIFSADLDRREAIPDDQRER 466 >UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I3D7_9SPHI Length = 435 Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 105/413 (25%), Positives = 168/413 (40%), Gaps = 83/413 (20%) Query: 53 HSQQMALPASTQKVITALAALIQLGPD---FRFTTTLETKGNVENGVLKGDLVARFGA-D 108 +S+Q +PAST K+ T A + L R+TT +GD + +GA D Sbjct: 67 NSEQRFIPASTTKLFTLFAGVSILNDSTQTLRYTT-------------QGDTIRIWGAGD 113 Query: 109 PT-----LKRQDIRNMVA---TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF 160 P+ L + + + +A T+ S NQ D+ F GW W+D + Sbjct: 114 PSWGYKELYQPEFKKFLAPFQTVIFSDANQ-------DSPAFGY-----GWQWDDYYYDY 161 Query: 161 SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELD 220 SA + + N V + +P + +S YP R L R Sbjct: 162 SAERTSLPIFGNLVQVKR-NGNRPVVSPKVFQSSVYPTQ--RSTRELERDFHS------- 211 Query: 221 VVPGDLNRFTLT-GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW---SGTLLR 276 NRF R E +P ++ + A + G TW S +L + Sbjct: 212 ------NRFYYNPNNFRGREEFIPFIYSPELFTQLAS-------EATGKTWIYQSDSLPK 258 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 + QV +++PL +LK M+ +SDN +A+ M+ F T RA + Sbjct: 259 ENQV---------WRASPLLPILKEMMLESDNFLAEQTMLMVSDRIFQRLDTERAIEYLL 309 Query: 337 RQILRQQAGVDIGNT-IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGY 395 + L D+ + DGSGLSRHNL+ P TM+ + + I + + +LP G Sbjct: 310 KTYL-----FDLPDKPQWVDGSGLSRHNLMTPRTMVALFEKIYRMLPDDQLYELLPTGGV 364 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 G+++ +QA + + AKTG++ ++L G I T SG+ F S Y Sbjct: 365 SGTIE---NSYQAQ-EPYIFAKTGTMSNNHSLVGLIKTKSGKIYCFAFMNSNY 413 >UniRef50_C9Z722 Putative carboxypeptidase n=2 Tax=Streptomyces RepID=C9Z722_STRSW Length = 444 Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 17/221 (7%) Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V D + AG + +L G+T G + R V + VAS S L ++K MLK SD Sbjct: 216 VDDTSLDAGGVFAKQLAARGVTVDGGVTRGV-VGKGDVPVASHTSGKLSAVVKQMLKVSD 274 Query: 308 NMIADTVFRM--IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 N IA+++ R+ +G R T+ G+ VR++L + G+ +GN + DGSGLSR I Sbjct: 275 NDIAESLLRLTALGAGR---SATFEDGTAVVREVLTRY-GISLGNFEMYDGSGLSRATRI 330 Query: 366 APATMMQVLQYIA--QHDNELNF-ISMLPLAGYDGSL------QYRAGLHQAGVDGKVSA 416 T+ ++ A +H L + I LP++G G+ ++ + V G+V A Sbjct: 331 PARTIADIVDLAADPRHARTLRYVIDGLPVSGEAGATLGPEFGRFDTADSKCAV-GQVMA 389 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 KTG+L G L+G G+ F + P+D ++ Sbjct: 390 KTGTLTGAVALSGLTKAQDGEWKVFSFIENDSTAGPSDIKD 430 Score = 44.7 bits (104), Expect = 0.009, Method: Compositional matrix adjust. Identities = 40/106 (37%), Positives = 50/106 (47%), Gaps = 19/106 (17%) Query: 53 HSQQMAL-PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD--LVARFGADP 109 H+ AL AS K+ TA AAL LGP+ RFTT V+ GD L G D Sbjct: 101 HNADTALMAASNTKLATATAALTVLGPEHRFTTK----------VVYGDGTLTLVGGGDR 150 Query: 110 TLKRQDIRNM----VATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 TL D+ + VA LK +G+ + V ID S+F A GW Sbjct: 151 TLTTADLDALAGTAVAGLKNAGLTSV--KVRIDDSLFPEPTLANGW 194 >UniRef50_A7BBM9 Putative uncharacterized protein n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BBM9_9ACTO Length = 446 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 54/152 (35%), Positives = 81/152 (53%), Gaps = 5/152 (3%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 VA SA + + L+ ML SDN +AD R A P T+ ++ VR+ L +AGV Sbjct: 266 VAQVSSATMGEQLRWMLAHSDNTLADQYCRFAARAA-GAPSTYEGATETVRKTL-TEAGV 323 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ-HDNELNFISMLPLAGYDGSLQYRAGL 405 + D SGLS ++ I+ T++ VL+ + E N + +LP AG G+L R + Sbjct: 324 PTEGLTLEDCSGLSSNDKISAHTLVGVLKASYEGTGTEANTMRLLPWAGLVGTLSKR--M 381 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + G V AKTG+LQ V +L+G + T SG+ Sbjct: 382 TEEPAAGNVQAKTGALQEVTSLSGSVMTKSGR 413 >UniRef50_UPI000185C037 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Corynebacterium amycolatum SK46 RepID=UPI000185C037 Length = 498 Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 26/176 (14%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 VA QSAPL + M+ SDN++A+++ R + +R +P T+ + AVR L + G Sbjct: 302 VALVQSAPLVTRVHEMMNYSDNVLAESIAREVAISR-GLPPTFEGAARAVRDTLAEH-GF 359 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--------------QHDNELN------F 386 + +++D SGLS N I+P + +VL A Q +E Sbjct: 360 PLDGAVLSDSSGLSTDNRISPQHLSEVLNSAAGPVESAEQGGLAESQESSESTALRLRPL 419 Query: 387 ISMLPLAGYDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + LP+A G+L R AG AG+ V AKTG+L LAG++ T SGQ + F Sbjct: 420 LDSLPVAAVSGTLATRFAGQSGAGI---VRAKTGTLNKASALAGYVVTKSGQVLTF 472 Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust. Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 19/124 (15%) Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR--- 113 +A+PAS+ K++TA AAL+ LG D R +T + + VL G G DPTL + Sbjct: 134 VAMPASSMKILTASAALLDLGEDHRVSTRVSRVTGTNDIVLHG------GGDPTLSKDGE 187 Query: 114 ---QDIRNMVATLKKSGV--NQIDGNVLIDTSIFAS--HDKAPGWPWNDMTQCFSAPPAA 166 QD ++ KK V + G V +D S+F H+ W + + AP + Sbjct: 188 GFFQDSASIAELAKKISVVIPEGVGKVYLDNSLFTESFHET---WERAGLEDGYIAPVES 244 Query: 167 AIVD 170 ++D Sbjct: 245 VMMD 248 >UniRef50_A4F6R6 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F6R6_SACEN Length = 1264 Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 17/169 (10%) Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 V+ +S P+ D+ +I+L+ SDN++A+ + R + A N P ++ S AVR++L Q+ G Sbjct: 1073 VLGEVKSPPVQDMAEIVLQHSDNVLAEALAREVAIATGNEP-SFAGASKAVREVL-QRNG 1130 Query: 346 VDI-GNTIIADGSGLSRHNLIAP---ATMMQVLQYIAQHDNELN--------FISMLPLA 393 D+ GNT++ DGSGLS + + P +++ A + L + LP+A Sbjct: 1131 FDLSGNTMV-DGSGLSLDDRVTPQLLGSLLAAATAPAGPEGGLEPKSAKLRALLPGLPVA 1189 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 GSL R + G V AKTG+L G +LAG + T +G+ + F Sbjct: 1190 AGSGSLHDR--YTDSSGRGWVRAKTGTLDGANSLAGTVVTENGRLLVFA 1236 >UniRef50_A5CPH1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Microbacteriaceae RepID=A5CPH1_CLAM3 Length = 452 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%) Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT------VVASKQSAP 294 PL L D + A +D L + G T+ L V + GT V+ +S P Sbjct: 215 PLQLDADRADPVAVVSARSEDPLARVGSTFRSMLGGSADVTQ-GTAPAGAAVLGEVESQP 273 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 + L++ L SDN++A+++ R++ + T ++ + + + L Q G+D I Sbjct: 274 VSSLIQTALINSDNVLAESLARLV-SIQVGAGNTQQSLATGIPKAL-QAYGLDTSTLTIV 331 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI-SMLPLAGYDGSLQYRAGLHQAGVDGK 413 DG GLS N + P+ + Q++ + Q L ++ LP+AG G+L R A G Sbjct: 332 DGQGLSPENRVPPSLLAQLMIQVDQRQQALGYLHDGLPVAGRTGTLAGRFTGDSAVARGH 391 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 + AKTG + Y LAG + A G ++ F Y G Sbjct: 392 IVAKTGWIDTGYTLAGIVDAADGTKLTFAFYAIG 425 Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust. Identities = 37/120 (30%), Positives = 50/120 (41%), Gaps = 25/120 (20%) Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR------- 113 AS KVIT+ AAL LGPD R TT V G G +V G DPTL R Sbjct: 99 ASVMKVITSAAALAALGPDRRIATT------VVRGSEPGTVVLVGGGDPTLSRLTSGSSV 152 Query: 114 -----------QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSA 162 Q +R A + I +++DTS+F+ P W ++ +S+ Sbjct: 153 YPGAPRLSDLAQQVRAAWAADPATAGTPIT-RIVLDTSLFSGDTWIPSWAASERKAGYSS 211 >UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B57936 Length = 370 Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 8/170 (4%) Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 +AS SAPL +++ ML SDN IA+ + R A ++ G+ AV L + G+ Sbjct: 188 IASVSSAPLATIVERMLTYSDNDIAEHLARQTALA-TGATADFKGGARAVHDRL-DKLGL 245 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE--LNFISMLPLAGYDGSL--QYR 402 + +T DGSGL R + + P + +L A+ D ++ LP+AG+ G+L +Y Sbjct: 246 PVEDTSFHDGSGLDRADKLTPRLLTALLAEAARKDQPGLRPVLTGLPVAGFTGTLATRYT 305 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 A ++AG G V AKTG+L GV LAG + T SG+ + F ++S A +P Sbjct: 306 AEHNKAGT-GLVRAKTGTLTGVNTLAGTVVTRSGRLLGFA-FMSHDAPDP 353 >UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Micrococcineae RepID=C7R121_JONDD Length = 476 Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 11/199 (5%) Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQT-------QVNEPGTVVASKQSAPLHDLLKIM 302 D A++A D L + GIT + T R+ + V+AS QSA + +++ Sbjct: 250 DPATHALTTFADHLTELGITVTNTPSRRVLDRDGYAATIDDERVIASVQSATVGEIVDYF 309 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 LK SDN I + + R++ R +PGT+ + AV Q L G+D + D SGL Sbjct: 310 LKTSDNTITEVMGRLVAVER-GLPGTFDGATTAVIQALTTM-GLDTTGVDLVDCSGLGDT 367 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 + + + + + + +AQ + + +A YDG+L R G V AKTGSL Sbjct: 368 STVTASLINEAINTMAQAPAYRQAVRGMAVAAYDGTLNDRYTNRNG--RGLVRAKTGSLP 425 Query: 423 GVYNLAGFITTASGQRMAF 441 GV LAG + T + + F Sbjct: 426 GVTALAGTLLTLDDRTLTF 444 Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust. Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 13/131 (9%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G ++A++V P ++ + AS QK++T LAA+ L P+ R +TT+ GN Sbjct: 93 GPSVAVVVSDTFTGDPITAVNADTPIVAASVQKILTGLAAMDVLDPNSRISTTVVQAGNN 152 Query: 93 ENGVLKGD--LVARFGADPTL--KRQDIRNM----VATLKKSGVNQIDGNVLIDTSIFAS 144 ++ G ++A DP +RN+ A+LK +G I N+ +D S+F Sbjct: 153 TLYLVGGGDMMLAANTGDPDAVNGHAGMRNLAEDTAASLKLTGRTTI--NLYLDDSLFTG 210 Query: 145 HDKAPGWPWND 155 +P PW D Sbjct: 211 ---SPTGPWAD 218 >UniRef50_Q3AXV2 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=12 Tax=Cyanobacteria RepID=Q3AXV2_SYNS9 Length = 441 Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 21/195 (10%) Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 + V+E V+ ++SAP+H LL + +S N A+ + R +W G ++ Sbjct: 245 EESVDEKSVVLHREESAPMHALLSLANTESHNFTAEVLMR-------EAANSWDLGQASL 297 Query: 337 RQILRQQA-GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGY 395 QA GV +G I DGSGLSR N + + +L +AQH + + + +AG Sbjct: 298 ITTRWLQAQGVPMGGVRIRDGSGLSRGNRLTTRAISTLLWRMAQHPLGSYYQASMAIAGQ 357 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP--- 452 G+L+ R G + G+ KTG+L GV +++G + T G R +V +S P Sbjct: 358 RGTLRKRFG--STTLYGRFWGKTGTLSGVRSISGVLETKHGPR--YVSMISNGGSAPFAV 413 Query: 453 ------ADQRNRRIP 461 A QR R P Sbjct: 414 MGDVLLASQRISRCP 428 >UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUJ7_DESOH Length = 435 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 95/411 (23%), Positives = 157/411 (38%), Gaps = 77/411 (18%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 +++VQ++ + + + +PAS K++T+LAA LG DFRF T T Sbjct: 60 SVLVQRMDDGRVVLAENPDTLLVPASILKIVTSLAAFEILGKDFRFITEFYTTPG----- 114 Query: 97 LKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM 156 GDL+ + DP+L ++I A + + + G++L+D S FA PG Sbjct: 115 --GDLIIKGYGDPSLVSEEIE--AAAFRIAAMVPSVGDILVDASFFAPGIAVPGRKIGS- 169 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 +Q + A A + N +V+ D ++ P+ F++ R Sbjct: 170 SQPYDAVNGALCANYNTVNVTR------KDGRYVSAEPQTPLLDFARRRI---------- 213 Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS----YAGAILKDELKQAGITWSG 272 R +P A + AS YAG + L++ G SG Sbjct: 214 --------------------ARMDPFSGRVAFIEDASAAALYAGELFAWFLEKHGCHVSG 253 Query: 273 TL-LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 + + + S+ L D ++ +L+ S+N A+ + G + P Sbjct: 254 KVACGRVEKGRDTLEFTHVSSSALGDNVEKLLRYSNNFTANQLLLACGAKAYGPPADLAR 313 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 G AV+ ++ +D + +GSGLSR N ++ M VL + P Sbjct: 314 GVAAVQDYVKTVLAID--GMKVVEGSGLSRENRMSARMMAGVLA------------AFEP 359 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 AG + V G KTG+L GV AG+ G R FV Sbjct: 360 YAG------------RMRVFGNEYYKTGTLSGVNTRAGYFLYEDGPRYLFV 398 >UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M516_GRAFK Length = 445 Score = 71.6 bits (174), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 98/438 (22%), Positives = 178/438 (40%), Gaps = 74/438 (16%) Query: 48 PAID-----YHSQQMALPASTQKVITALAALIQLG---PDFRFTTTLETKGNVENGVLKG 99 PAID +++++ PAS K+ + L LG P ++TT ++ + KG Sbjct: 58 PAIDKMLYTHNAEKYFTPASNTKLFSLYTGLKILGGSIPALKYTTVGDSL------IFKG 111 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC 159 F +P L + + N LK S D + +F GW W+D Sbjct: 112 TGDPSF-LNPELPKSHVWNF---LKNS-----DKKLFYAPPVFKEKRLGSGWAWDDYDSY 162 Query: 160 FSAPPAAAIVDRNCFSVSLYS-APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 +SA + N + A KP S P + + + + +Y + Sbjct: 163 YSAEKIDFPIYGNLIEIKFEKGASKP---------SIKPGLLSDSIHAIKPAKVKNKYVQ 213 Query: 219 LDVVPGDLNRFTLTGCLPQR---SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 ++ + P+ ++ +P F+ + I+K S TL Sbjct: 214 REIASNKMEY----QNFPREEDFTQNIPFNFSSE-------LIVK--------LLSDTLN 254 Query: 276 RQTQV--NEPGTVVASKQ--SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 R+ ++ + T+ +K S P + K M++ SDN IA+ + M + T Sbjct: 255 RKVEIYRGDTKTLKFNKTLYSVPGDSIYKRMMQVSDNFIAEQILLMAADKISDSLKT--- 311 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 S A+ + G + DGSGLSR+NL P +M+++++ I + + +L Sbjct: 312 -SIAIDYMKENYLGDLLDEAKWVDGSGLSRYNLFTPRSMIKLIEKIEKEMPKEELFKILA 370 Query: 392 LAGYDGSLQ--YRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 G G+L+ Y+A + AKTG+L+ ++L+GF+ T SG+ + F S Y Sbjct: 371 AGGESGTLKNYYKAETPY------IYAKTGTLRNNHSLSGFLITKSGKTLIFSFMNSNYT 424 Query: 450 VEPADQR---NRRIPLVR 464 V ++ + R + ++R Sbjct: 425 VPTSELKQGMTRILEMIR 442 >UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGG1_ACTMD Length = 1016 Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 13/175 (7%) Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 V+ +S PL L++ M++ SDN++A+T+ R + AR N ++ + AVR +L + G Sbjct: 826 VLGEVKSVPLDQLIENMMQLSDNVLAETLAREVAKAR-NAETSYEGATKAVRDVLTEN-G 883 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN--------FISMLPLAGYDG 397 D+ I +D SG+S N + + +L A+ D + ++ L +AG +G Sbjct: 884 FDLTGVITSDASGMSVQNKVPAKLLGDLLTAAARPDAATDPVTTRLRPLLTALAVAGGNG 943 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM--AFVQYLSGYAV 450 +L+ R AG G + KTG+L V++LAG + G+ + AF+ SG A+ Sbjct: 944 TLKERFAQSPAG-KGWIRGKTGTLTEVHSLAGVVVDTDGRLLVFAFMSNGSGDAL 997 >UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WUR8_RENSM Length = 475 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 110/429 (25%), Positives = 169/429 (39%), Gaps = 95/429 (22%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 N V + A D S+ ++PAS K++TA A L LG D R LETK V Sbjct: 89 NFTAQVLDAASGAVLFDRKSEAPSIPASNLKLLTAAAVLKNLGADSR----LETK--VFR 142 Query: 95 GVLKGDLVARFGADPTLKR-QDIRNMV------ATLKKSGVNQIDGN-------VLIDTS 140 G G +V R G D L + + V ATL + V + G+ V+ID S Sbjct: 143 GTEPGTIVLRAGGDSLLAAGESVAGAVNGHAGLATLAQRVVAALAGSAGPAPLRVIIDDS 202 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 IF P W PGD+A +A +P+ + Sbjct: 203 IFTGPALNPAW-------------------------------DPGDVAVGEIAPIFPLAV 231 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP-LPLAFAVQDGASYAGAIL 259 SA A + P D + S+ LP + Sbjct: 232 ---------NSARADVKSVAGRPKDSAFASAQAFAAALSQAGLPASV------------- 269 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 D ++ AG + L T N V+AS QSA + + + ML+ SDN +A+ + RM Sbjct: 270 -DSVRAAGADLT---LNDTTKN----VLASVQSATIAEQVGYMLQNSDNFVAEVLARMSA 321 Query: 320 HARFNVPGTWRAGSD----AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 ++ ++GS AV + + G+ I D GL+ + ++ A + QV++ Sbjct: 322 ISQ------QKSGSSDDSIAVTESTVKGLGLATEGLKIFDNCGLAPADRVSAALLGQVMR 375 Query: 376 YIAQ--HDNELNFISMLPLAGYDGSLQYRAGL-HQAGVDGKVSAKTGSLQGVYNLAGFIT 432 + Q N + LP+AG G+L+ R G + G + AKTG+L V L G++ Sbjct: 376 LMTQGPDANVRRAVDGLPIAGLSGTLENRYGTAATSNAAGLIRAKTGTLNTVMTLTGYVV 435 Query: 433 TASGQRMAF 441 G+ + F Sbjct: 436 DLDGRLLIF 444 >UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Rhodobacteraceae RepID=C7DAS9_9RHOB Length = 504 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 100/420 (23%), Positives = 170/420 (40%), Gaps = 39/420 (9%) Query: 50 IDYHSQQMALP-ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 ++ +++Q+A P AS K +TAL AL QLG + RF T + G +GV GDLV D Sbjct: 82 LEANAEQIAQPPASVAKAVTALYALDQLGAEHRFETQVIATGGFADGVCLGDLVLVGSGD 141 Query: 109 PTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ--CFSAPPAA 166 PTL + ++ LK G+ ++ G I D P D Q P+ Sbjct: 142 PTLDTDAMESVARDLKAVGLREVRGEFQI------YEDALPYVATIDAQQPDYLGYSPSV 195 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFI---RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 + ++ N V D + R + P +++R R + Y + Sbjct: 196 SGLNLNFNRVHFEWRRAGADYSVTMDARSEKHRPDVAMARMRVERRETPVYAYSD----G 251 Query: 224 GDLNRFTLT----GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ 279 G +++++ G R P V+ YA +L+ + GI + T+ Sbjct: 252 GHFDQWSVARSALGNAGARWLP------VRKPGLYAADVLRTFARAQGIALGTASV--TR 303 Query: 280 VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI 339 G V+A S + + ++ MLK S N+ A+ + R A + + + Sbjct: 304 ARPEGAVLARFLSGTMTEQMRGMLKFSTNLTAEAAG-LAASQRTGAIDGLSASASLMNRW 362 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL 399 + + G+D D SGL + I+ M+ L + + N + + + D Sbjct: 363 CKAELGID---ATFVDHSGLGDQSRISAEQMVAALVRVGPNGNLRPILKDIDMTDED--- 416 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 + R G H +V+AKTG+L V LAG+I G+ +AF + + A R+ R Sbjct: 417 RKRIGDHPV----QVAAKTGTLNFVSALAGYIRAVDGRMLAFAFFAADVERRAAISRSDR 472 >UniRef50_D1Y9P2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Propionibacterium acnes RepID=D1Y9P2_PROAC Length = 457 Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 54/177 (30%), Positives = 92/177 (51%), Gaps = 4/177 (2%) Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 L+ AGIT +G++ R + + +A+ QS P+ DL+ L++SDN A+ + R + A Sbjct: 251 SLRSAGITVNGSVSRH-KADRSAKEIAAVQSLPVEDLVTRTLEESDNSAAEVLSRQMALA 309 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 PG++ G+ A+ + L+ G +I DGSGLS+ N I + + + + Sbjct: 310 SGK-PGSFAGGTQALEEHLKNIGAWQDG-AVIQDGSGLSQGNRITALMLSRAWRKVLTTL 367 Query: 382 NELNFISMLPLAGYDGSLQYR-AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + +P+ G+L R + A G V AKTGSLQGV +++G++ A G+ Sbjct: 368 KLQPVANAVPVGRVSGTLHKRFSDPSTAAGRGVVHAKTGSLQGVISMSGWLRDADGR 424 >UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXX7_DEIDV Length = 486 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 77/266 (28%), Positives = 116/266 (43%), Gaps = 65/266 (24%) Query: 247 AVQDGASYAGAILKDELKQAGITWSGTLLRQ----------TQVNEPGTV---------- 286 A + S GA L EL+QAG+ +RQ T++++ G Sbjct: 207 ASAEARSRLGAALIAELRQAGVRVVSDRVRQAARSRPYVPPTRLDDQGRALPPDPQVPVS 266 Query: 287 ------VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 +AS +SA + +L L+ SDN+ A+ + + R GT + R +L Sbjct: 267 RRPEQGIASVRSASVAGVLARTLRPSDNLRAEELLATLA-VRPQGTGTLQDALARERAML 325 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD------NELNFISMLPLAG 394 R+ G D+ ++ADGSGLSR N + P + Q+L+ + HD L + +LP G Sbjct: 326 RR-TGADLSGVVLADGSGLSRKNRLTPRALAQLLKVM--HDLPYPNRAGLRQLQLLPQRG 382 Query: 395 YDGSLQYRA-------GLHQAGV-------DGK--------------VSAKTGSLQGVYN 426 L YR+ L QAG DG+ V AKTG+L GV Sbjct: 383 LPERL-YRSRQNVFVEALPQAGTGENVPGHDGRGGTLALRLQDEGLDVRAKTGTLPGVSA 441 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEP 452 LAG++T SG+ + FV ++G P Sbjct: 442 LAGYVTARSGRILVFVVLMNGPESSP 467 >UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XA90_NAKMY Length = 466 Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 62/197 (31%), Positives = 97/197 (49%), Gaps = 14/197 (7%) Query: 250 DGASYAGAILKDELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 D A+ AG L + Q +T GT QV + S P+ LL L+ SDN Sbjct: 251 DPATTAGKALARMIGQPDVTIVDGTAPEDAQV------LGQVSSQPMSVLLAQALENSDN 304 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 ++A+ + R + AR P ++ S A+ + L + +D + DGSGLS + + P+ Sbjct: 305 VLAEALARQVAIAR-GAPPSFDGASAAMLEAL-EDLKIDTIGIEMYDGSGLSTKDQVPPS 362 Query: 369 TMMQVLQYIAQHDNEL--NFISMLPLAGYDGSL--QYRAGLHQAGVDGKVSAKTGSLQGV 424 M QV+ + D N ++ +P+AG GSL +Y+ +AG G V AKTGS+Q Sbjct: 363 VMGQVVALAVKGDPPALRNLLTGMPVAGVSGSLADRYQDDASRAGA-GWVRAKTGSVQLT 421 Query: 425 YNLAGFITTASGQRMAF 441 Y LAG++ + + F Sbjct: 422 YALAGYVPDVDNRILVF 438 >UniRef50_B4VYN4 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VYN4_9CYAN Length = 323 Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 15/141 (10%) Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 QS L + + + ++S N AD++ R IG G AV+Q L GVD + Sbjct: 156 QSKSLDEWVTVTNQRSSNSYADSLLRYIG------------GPSAVKQTL-APLGVDPNS 202 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 DGSGLSR N+ P ++ L+ + F LP+AG +G+L+ R L + Sbjct: 203 FRQVDGSGLSRQNVATPQALIATLKAMMYAKGNDLFYRSLPVAGVNGTLRNRLRLPE--T 260 Query: 411 DGKVSAKTGSLQGVYNLAGFI 431 G++ AKTG+L+GV +L+G++ Sbjct: 261 QGRIRAKTGTLRGVRSLSGYL 281 >UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S666_CHRVI Length = 409 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 101/416 (24%), Positives = 170/416 (40%), Gaps = 78/416 (18%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A D+ + Q+ A +L+V++ G I Y ++ +PAST K++TA AAL G D Sbjct: 36 ALADDPVAQVRALPQASLLVKERGQDR--IAYQAETARIPASTMKLLTAYAALETWGRDH 93 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 RF T + + G L + ADP L +++ +VA LK+ GV ++ G + +D S Sbjct: 94 RFHTDVFQDAS-------GWLWVKGAADPYLVSEELDRLVAALKRQGVRRVAG-IGLDDS 145 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 +F + G + + + AP A + N ++ + G+ R+ S P T Sbjct: 146 LFDPDVEIAG--RSSSSNPYDAPVTALAANFNTLNLI-----REGE----RIRSAEPQTP 194 Query: 201 FSQV--RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 + R G+A Q L R + L Y G + Sbjct: 195 LTATGERLGRSGAAGKQRINL------------------REREIAL--------RYFGEL 228 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 L +L+ A I ++ ++ S L +++ ML+ S N +A+ +F Sbjct: 229 LAAKLRAADIEVGDPQRIAPTPSDAKRILRHANSRTLAEMVAPMLEYSSNFVANALF--- 285 Query: 319 GHARFNVP-GTWRAGSDAVRQILRQQAGVDIGNTI--IADGSGLSRHNLIAPATMMQVLQ 375 R P G R ++ + A G T I DG+GLSR N ++ ++++L Sbjct: 286 --LRLAAPDGQGRISMTQAKRTMTDFAQRRFGWTAFKIDDGAGLSRANRLSARQLVELL- 342 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 D YR + Q D V AKTG+L+G+ + AG++ Sbjct: 343 --------------------DAFAPYRDLMPQQDDDPNVRAKTGTLRGISSYAGYV 378 >UniRef50_UPI0001B4DBAD D-alanyl-D-alanine carboxypeptidase n=5 Tax=Streptomyces RepID=UPI0001B4DBAD Length = 407 Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 65/208 (31%), Positives = 100/208 (48%), Gaps = 10/208 (4%) Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V D A+ A D LK+ GI T ++ + +A+ S PL L++ ML SD Sbjct: 189 VADPAADAARKFGDLLKEHGIKT--TPPGPSKATTRASTLATVSSPPLSALVERMLTHSD 246 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN--LI 365 N +A+++ R A P + +A+ L+Q G+ + + DGSGL R + Sbjct: 247 NDLAESLARHTALATGK-PADFAGAGEAITARLKQL-GLPVKGADVKDGSGLDRRDRLTA 304 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 T + V H + ++ LP+AG+ G+L R G AGV V AKTG+L GV Sbjct: 305 DLLTALLVKAGDPAHPELRSALTGLPVAGFTGTLAGRYGDGAAGV---VRAKTGTLTGVN 361 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEPA 453 LAG + G+ +AF +L+ +PA Sbjct: 362 TLAGTVVDKDGRLLAFA-FLANATTDPA 388 >UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWB7_9GAMM Length = 604 Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 3/109 (2%) Query: 41 QKVGASAPA---IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVL 97 Q V ++AP Y++ PASTQK+I +L LG DF + T L G V G L Sbjct: 99 QNVASTAPQKPLFSYNADVPRTPASTQKLIPTYVSLDSLGKDFVWQTKLYQHGFVWKGTL 158 Query: 98 KGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 GD++ + DP L+ + + ++A +K G+ Q+ GN++ID F D Sbjct: 159 YGDVIVQGSGDPKLENERLYQLLAMIKAQGIKQVQGNLIIDNQQFQGVD 207 >UniRef50_D1A551 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=2 Tax=Streptosporangineae RepID=D1A551_THECD Length = 459 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 14/213 (6%) Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V+D A+ A LK G+ L +T ++ V S PL L++ + SD Sbjct: 235 VKDPAASAAKKFVRLLKDRGVRAE--LGERTVADKAAATVGQVHSPPLSALVERTMTVSD 292 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI-IADGSGLSRHNLIA 366 N +A+ + R + R P ++ G+ R ++ + A + + + + DGSGLS N I Sbjct: 293 NDVAEALLRQVALKR-GAPVSFEGGA---RAVMAELARLGVAEGVRVHDGSGLSTRNRIT 348 Query: 367 PATMMQV--LQYIAQHDNELNFISMLPLAGYDGSL---QYRAGLHQAGVDGKVSAKTGSL 421 P + ++ L A+H I+ +P+AG+ G+L +Y AG V AKTG+L Sbjct: 349 PLALARIVSLAASAEHPELRAAITGMPVAGFTGTLAAPRYTTAQTAAGAG-AVRAKTGTL 407 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 GV LAG + A G+ +AF ++ G P D Sbjct: 408 SGVSTLAGLVHDADGRLLAFA-FMMGDGRGPVD 439 Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 24/134 (17%) Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 + + + A+PAST K++T++AAL LGP R TT + +G VL G G DPTL Sbjct: 101 HRADRPAVPASTTKLVTSVAALSALGPHHRITTRV-VRGGPRAVVLVG------GGDPTL 153 Query: 112 KRQ--------------DIRN-MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM 156 + D+ + A LK++G +I V D S++ A GW N + Sbjct: 154 TARTPSAGAYPRYASLADLADQTAAALKQTGTGEI--RVDYDASLYEGAGTAEGWKPNYL 211 Query: 157 TQCFSAPPAAAIVD 170 AP +A VD Sbjct: 212 PDGEVAPMSALTVD 225 >UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312D4 Length = 535 Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 109/456 (23%), Positives = 175/456 (38%), Gaps = 99/456 (21%) Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK 112 ++Q+M P ST K+ + AL + G ++RF T + +G V G L G LV D TL Sbjct: 81 NAQKMFDPGSTMKLYSVSTALSRYGTNYRFRTPVYRQGTVSGGTLGGSLVLVGSGDLTLG 140 Query: 113 -------RQDIRNMVAT----------------------------LKKSGVNQIDGNVLI 137 R N+ A ++ SG+ ++ G+V++ Sbjct: 141 LRAEPGGRLAYANLPAVDHSYADQLPGAVLPKGDPMAGLDELARDVRASGITRVSGDVVV 200 Query: 138 DTSIFASHDK------APGWPWNDMTQCFSAPPAA---AIVDRNCFSVSLYSAPKPGDMA 188 D +FA +D +P W ++ P A A +D+ + S Y+ D Sbjct: 201 DDRLFAPYDGFPDGLISPIWVNENLVDLLVKPGAVGQPASIDQRPLTAS-YTV----DNR 255 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + V + P T+ T PG + +TG + S P + V Sbjct: 256 VVTVRAGKPTTLNVSEPT----------------PGTIE---VTGQIAAGSGPTLKVWEV 296 Query: 249 QDGASYAGAILKDELKQAGITWSGT--------LLRQTQVNEPGTVVASKQSAPLHDLLK 300 D A++A L++AG+T + T LL + V S+ L K Sbjct: 297 DDPAAFARTAFIAALQRAGVTVTATATGPNPATLLPPKGSYQAADRVGEHVSSTLSQYAK 356 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA------GVDIGNTIIA 354 ++LK S N AD + + R GS L + GV I Sbjct: 357 LILKVSHNRGADLMTCL---------AAVRRGSTDCEDGLTSEVQTASGLGVPYAGVIPM 407 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL---QYR---AGLHQA 408 DG+G PA + +L+++ + F+ LP+ G DG+L + R AG Q Sbjct: 408 DGAGSDDQGRTTPAALATLLRHVVRAPYGRAFVDALPILGRDGTLANVESRSPAAGRSQM 467 Query: 409 GVDGK-VSAKTGSLQGVYN-LAGFITTASGQRMAFV 442 + VS G + + N LAG+ T SG+R+ F+ Sbjct: 468 KTGNRVVSNAAGQIIVLGNSLAGYAETKSGRRVVFM 503 >UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4G7_GORB4 Length = 465 Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 84/170 (49%), Gaps = 6/170 (3%) Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 G V+AS QSAPL + ML+ SDN++A+T+ + + P T +G AVR L+Q Sbjct: 277 GQVIASVQSAPLVTRVNDMLRYSDNVLAETLSVELAVHQGLSP-TLESGVSAVRNTLQQT 335 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM---LPL-AGYDGSL 399 T + D SGLS N + PA ++ V+ A + M LP+ AG G+L Sbjct: 336 FAQQWEGTSLHDASGLSYANRV-PAELLDVVMTAASGPAQPKMRPMLDGLPVAAGLAGTL 394 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 R G V AKTG+L GV +L G + T G+ ++F G + Sbjct: 395 SDRFDPRTNPGAGWVRAKTGTLTGVSSLTGIVQTVDGRVLSFAMMSGGTS 444 >UniRef50_B9XI94 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=bacterium Ellin514 RepID=B9XI94_9BACT Length = 802 Score = 68.6 bits (166), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 15/200 (7%) Query: 267 GITWSGTLLRQTQVNEPGTVVASKQSAPL-HDLLKI--------MLKKSDNMIADTVFRM 317 GIT SG + +T PGT++ + S L ++ L + MLK S N++AD + R Sbjct: 191 GITVSGIPVGKTGFTVPGTLMYTHLSTDLTYNSLPLRMDVACTPMLKVSHNVMADALLRH 250 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 I + + N ++ AG+ V L+ AGV + DGSGLS +N + + +L+Y+ Sbjct: 251 ISY-KINGNDSFAAGAAQVLPWLKNVAGVSTNGIAMNDGSGLSHNNKFSGRQTVTLLRYM 309 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA-SG 436 + + S LP+ DG+L R G+V AKTGSL L+G+I G Sbjct: 310 LGTFSS--YASTLPIGCVDGTLGSR--FCSTDGSGQVHAKTGSLSISIALSGYIDNKYDG 365 Query: 437 QRMAFVQYLSGYAVEPADQR 456 +R F + A++ AD R Sbjct: 366 RRYLFSFIANTNAIDQADTR 385 >UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCW6_PSYWF Length = 682 Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 4/154 (2%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K+I AL LGP+F + T G + L GDL+ + DP L Q + + Sbjct: 211 PASTMKLIPTFIALDLLGPNFVWVTQAYHTGFISANTLYGDLIIKGSGDPKLTLQRLNKL 270 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + +K++G+ I G++++D+S+F K P ND + ++A P +V N ++ L Sbjct: 271 LEQVKQAGIQHIKGDIVLDSSVFQGVTKDPAAFDNDPLRPYNASPDGLLV--NFSTLELT 328 Query: 180 SAPKPGDMAFIRVASYYPVTM--FSQVRTLPRGS 211 + P D YY M + TLP S Sbjct: 329 AVPLLNDAQRGTAKLYYKPLMADYDLPTTLPTAS 362 Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 9/122 (7%) Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAG-LHQAGV 410 ++++GSGL R + + +LQ+ H +++ L +AG G++ A L + Sbjct: 560 VMSNGSGLCRDCSVTAENLADLLQFAYNHRYFDTYVNSLGVAGISGTITEHAERLPSSAA 619 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 G+ KTG+L V ++AG++ SGQ V ++G + PL +E+R Sbjct: 620 IGRAWIKTGTLNNVTSMAGYVHGKSGQDYIVVGIING--------STNQAPLNTYEARYV 671 Query: 471 KD 472 D Sbjct: 672 LD 673 >UniRef50_B4VC16 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VC16_9ACTO Length = 476 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 113/389 (29%), Positives = 159/389 (40%), Gaps = 77/389 (19%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K+ TA A L LGP+ RF TT V G G ++ G DP+L Sbjct: 132 PASTVKIATATAVLAALGPEHRFRTT------VTPGAAPGQIILVGGGDPSL-------- 177 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 T +K G+++ + A KA G T S + SLY Sbjct: 178 --TARKKPPAGSGGSLVALAADTAQALKAAG------TDSVSL----------GYDDSLY 219 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 S P + +P+ + V A L G LN +L+G RS Sbjct: 220 SGP-----------ARHPIGLNPNV---------APLSALTADEGRLND-SLSGPA-DRS 257 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHD 297 E D + D L GI +G + EP +A+ S PL Sbjct: 258 E---------DPSGDTARAFADLLADRGIKVTGAPAKARAAADAEP---LATTLSTPLGG 305 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 L++ ML SDN IA+ + R A PG++ AV L G+D ADGS Sbjct: 306 LVERMLTNSDNDIAEALARQSALASGQ-PGSFEGAGKAVAATL-ASLGIDTTGARFADGS 363 Query: 358 GLSRHNLIAPATMMQVLQYIA--QHDNELNFISMLPLAGYDGSLQYR--AGLHQAGVDGK 413 GL R + ++ + +L A Q ++ LP+AG++G+L+ R G AG+ Sbjct: 364 GLDRSDKVSAGLLTALLAKAADPQRPELRPVLTGLPVAGFNGTLRSRNSGGSPAAGL--- 420 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFV 442 V AKTG+L GV LAG + SG+ +AF Sbjct: 421 VRAKTGTLSGVNALAGTVVDPSGRLLAFA 449 >UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XXH2_PEDHD Length = 450 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 8/169 (4%) Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 +LK M+ SDN IA+ + + N G S A+ I + DGS Sbjct: 284 VLKAMMLPSDNFIAEQLLLVYA----NQLGEELNTSKAISYIEKTYLSELPDKPRWQDGS 339 Query: 358 GLSRHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 GLSR NL P M+++L+ I Q +N +M+P G G+L+ + V Sbjct: 340 GLSRRNLFTPRDMIKLLELIYKQVNNPARLFNMMPAGGKSGTLR---NAYPKTDQPFVFG 396 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 KTG+L GV+N +G++ T G+ F + Y V AD RN + ++ + Sbjct: 397 KTGTLSGVHNQSGYVLTKKGKTYIFSFMNNNYVVPTADVRNEMVRVMTY 445 >UniRef50_C2KSC9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Mobiluncus mulieris RepID=C2KSC9_9ACTO Length = 505 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 53/173 (30%), Positives = 87/173 (50%), Gaps = 7/173 (4%) Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 +E T+VA Q AP +++ MLK SDN +A+T+ R++ R P +G Q Sbjct: 302 HESPTIVALAQGAPFAQVIRKMLKVSDNTLAETLGRLVALHRGAKPTFTDSGKSV--QTA 359 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--QHDNELNFISMLPLAGYDGS 398 + GV +GNT + SGL+ I + +++ A +H ++ LP+AG DG+ Sbjct: 360 IGELGVHLGNTNLVGCSGLAHSTQIPAQALANLVRTAASPEHPELRAMLANLPVAGADGT 419 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 L R + G + KTG+L ++LAG + + Q +A+ +SGY E Sbjct: 420 L--RNVYQETTAAGNLRGKTGTLAISHSLAGTMVYQN-QVLAYALIISGYPEE 469 >UniRef50_D2NQQ1 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Rothia mucilaginosa RepID=D2NQQ1_9MICC Length = 563 Score = 67.8 bits (164), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 57/185 (30%), Positives = 93/185 (50%), Gaps = 7/185 (3%) Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 K++G+++ TL + +A+ +SA L + + M+ +SDN +A+ + R A Sbjct: 324 KESGMSF--TLAERRTAPAEAVEIAAVESATLLEQAQHMMLESDNALAEVLGRCAAIA-A 380 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+ A VRQ L AGV+I N + AD G+S + + T++QV+ + ++ Sbjct: 381 GKEGSGEAAQQTVRQAL-VDAGVNIENLVQADVCGMSLTDRVTARTLVQVVALLNADEHA 439 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGK--VSAKTGSLQGVYNLAGFITTASGQRMAF 441 +S P+AG G+L R G A V + V AKTG+L V +L G T G R+ F Sbjct: 440 EQLMSTFPVAGVSGTLSGRFGAANA-VHARTFVQAKTGTLYTVSSLCGVATRPDGTRLIF 498 Query: 442 VQYLS 446 L+ Sbjct: 499 AIILN 503 >UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Arthrobacter RepID=B8H9S3_ARTCA Length = 509 Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 120/449 (26%), Positives = 176/449 (39%), Gaps = 92/449 (20%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 +V AA VD + Q G +VQ D +PAS K++T++AAL L Sbjct: 98 AVLAARVDPLL-QADGGGTFTGIVQDALTGQVLFDRGGADGRVPASNMKLLTSVAALRAL 156 Query: 77 GPDFRFTTTLETKGNVENGVL---------------KGDLVARFGADPTLKRQDIRNMVA 121 GP+ F T + G N V+ G+++ R G TL Q VA Sbjct: 157 GPEHTFATRV-VAGPAANQVVLVGGGDVLLGPGESKPGEVMGRAGLT-TLAAQ----TVA 210 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 +L+ +G + VL+D S+F P W Sbjct: 211 SLQANGATG-EIKVLLDDSLFTGPALNPAW------------------------------ 239 Query: 182 PKPGDMAFIRVASYYPVTMFSQ-----VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + GD+A VA YP+ M S V T PR AQ Sbjct: 240 -QEGDVAAGEVAPVYPLAMNSARYDPAVTTGPRPQDAAQSAA------------------ 280 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLH 296 E A A A A + AG T + T E V+A QSA + Sbjct: 281 --EEFASRLRAAGAAAGLAVAAGVERSPGAGST------KPTAGTERPEVLAEVQSATVA 332 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 + ++L++SDN +A+ + RM A PG+ + AV L QAG+ G + D Sbjct: 333 SQVDLLLQESDNYLAEVMGRMASIADGG-PGSNDGATAAVSNQL-AQAGIAAGPLTLVDV 390 Query: 357 SGLSRHNLIAPATMMQVLQYIAQH-DNELNF-ISMLPLAGYDGSLQYRAGLHQAGVDGK- 413 GL+ N ++ A +V++ I D L + P+AG G+L R G ++ V G Sbjct: 391 CGLAMGNQVSAAQFAEVVRAITTGTDARLRAALDGFPVAGLTGTLDSRYG-DESTVQGAG 449 Query: 414 -VSAKTGSLQGVYNLAGFITTASGQRMAF 441 V AKTG+L V L+G++ A G+ + F Sbjct: 450 LVRAKTGTLNTVLALSGYVVDADGRLLVF 478 >UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWF5_DYAFD Length = 424 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 10/158 (6%) Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT-IIADGSGLS 360 M++ SDNM+A+ + + A T +A + AV L D+ + + DGSGLS Sbjct: 264 MMQASDNMLAEQLMLLYATANKLPLSTEKAIAHAVEHHL-----ADLPDKPVWKDGSGLS 318 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R+NL P TM+ +LQ I + +LP G G+L+ L + + AKTGS Sbjct: 319 RYNLFTPRTMVALLQKIYAKVPQERLFRILPAGGKTGTLK---NLFKEEPPF-IFAKTGS 374 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 L VYNL+G++ T G+ + F + + AD R Sbjct: 375 LSNVYNLSGYLITRKGKVLVFSFMNNNFTKPTADVRKE 412 >UniRef50_A5CSQ9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Clavibacter michiganensis RepID=A5CSQ9_CLAM3 Length = 479 Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 50/173 (28%), Positives = 88/173 (50%), Gaps = 20/173 (11%) Query: 283 PGT-VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI------GHARFNVPGTWRAGSDA 335 PG+ V+ + +SAP+ DL+ ML SD+ +A+T+ R++ G A ++ R+G+ A Sbjct: 283 PGSAVLGTVESAPVRDLVGYMLTHSDDTLAETLARLVAIETGAGSAAADI----RSGTPA 338 Query: 336 VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM-LPLAG 394 L + ++ DGSGLS N + A + +++ +A+H +L + L +AG Sbjct: 339 ALADLD----LPTDGVVLVDGSGLSDANRVPAALLTRLMVRVAEHRGDLAIVDAGLAVAG 394 Query: 395 YDGSLQYRAGLHQAGVD---GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 G+L G D G++ KTG+L+ ++ L G A G +AF + Sbjct: 395 RTGTLA-EGGRFTGAADAAAGRIRGKTGTLERMHGLTGIADAADGTEVAFTIW 446 >UniRef50_B0CEL8 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CEL8_ACAM1 Length = 437 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Query: 53 HSQQMALPA-STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 H + LPA S KV T+LA L +LGPD RF T + G ++NG L GDLV GADP Sbjct: 90 HQGTIPLPAASITKVATSLAVLKKLGPDHRFETKIGYIGTLQNGELNGDLVIEGGADPFF 149 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 +D + L ++G+ + GN+++ + +++ P Sbjct: 150 VWEDAIALGNLLNQNGIRNVSGNLIVVGPFYMNYEPDP 187 Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 21/161 (13%) Query: 277 QTQVNEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD 334 QT + P V + +S P+ +LLK M + S+N +++ + +G G+ Sbjct: 230 QTAASRPDQVKPLIQHRSLPVAELLKKMNQYSNNAMSEMLAEYVG------------GAT 277 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ--HDNELNFISMLPL 392 V Q+ Q+AGV + +GSGL N I+P + Q IA H E+ + + Sbjct: 278 QVAQMAAQEAGVPSQEIQLINGSGLGVDNRISPRAACGMFQAIAHLLHLQEMTIADIFAV 337 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 G D + L Q K K+G+L V ++AG + T Sbjct: 338 IGTDPGVHNERPLPQ-----KFVMKSGTLNRVSSIAGALPT 373 >UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxypeptidase n=5 Tax=Corynebacterium RepID=C8NJZ8_COREF Length = 421 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 53/159 (33%), Positives = 78/159 (49%), Gaps = 8/159 (5%) Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDA--VRQILRQQ 343 V+A+ +S L L+ M+++SDN++A+ + R R T GS A IL++ Sbjct: 246 VLATTESENLEQRLRRMMEESDNVMAEAIGRETAQNRGAATDT---GSSAQLTMDILKEH 302 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 G D+ I D SGLS NLI P + +L A + ++ LP+AG +G+L R Sbjct: 303 -GFDLRGVSIVDNSGLSFDNLITPRLLDDILHAAATDETLRPLLNTLPIAGGNGTLVDR- 360 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 G V AKTG+L LAG +T+ AFV Sbjct: 361 -YDDLSGAGWVRAKTGTLTATSALAGTVTSDRVYTFAFV 398 Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 10/104 (9%) Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K++TA AAL +LG D T +V G G V R D TL + ++ Sbjct: 101 PASATKILTAAAALYELGWDDTIHT------DVVVGQTPGTAVIRAAGDVTLSTDQLDDL 154 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 A L ++ VL+DTSI++ APGW D+ + AP Sbjct: 155 AAQLTGQDID----TVLVDTSIWSDETFAPGWERIDIDAGYIAP 194 >UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Corynebacterium matruchotii RepID=C5V8S4_9CORY Length = 420 Score = 66.2 bits (160), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 100/392 (25%), Positives = 161/392 (41%), Gaps = 104/392 (26%) Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 LPAS+ KV+T AAL++L D R TT + G+ + V+K D + + I++ Sbjct: 98 LPASSTKVLTVSAALLKLDLDDRITTRVVQSGS-DIAVIKA------AGDVWMTYETIKD 150 Query: 119 MVATLKKS--GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 + ++K+ GV Q+ IDTS + + W ++T+ F AP A++ + Sbjct: 151 LAEQIRKNLPGVKQVQ----IDTSAWTAPSFIESWGRENITEGFIAPMEPAMI----YGA 202 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 L A + GD +PR + A LDV +T Sbjct: 203 RLNGA-RSGD--------------------VPRSNTPA----LDVAGAVARELGVT---- 233 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLH 296 AF+ +G AG +K+ +A +S L Sbjct: 234 --------AFSKAEGTVPAGEGVKE-------------------------LAKVESPTLR 260 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ-----QAGVDIGNT 351 + ++ +++ SDN++A+ V R + +GSD V + LR Q D+ Sbjct: 261 ERIEKLMETSDNVMAEAVGREL------------SGSDPVGETLRILGEHFQIPADLK-- 306 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL--NFISMLPLAGYDGSLQYRAGLHQAG 409 I D SG+S+ N I PA + L + A DN ++ LP+A G+L+ R + Sbjct: 307 -IFDNSGMSKANRI-PAEFLDSLMFAAAKDNSRLSAILATLPVAAGTGTLESRYTTLRG- 363 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 G V AKTG+L L G I + SG+ F Sbjct: 364 -RGYVRAKTGTLTDTSALVGTILSESGRVYTF 394 >UniRef50_A9BIW7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIW7_PETMO Length = 453 Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 11/179 (6%) Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 L++ G+ + G + R +V ++ + S PL ++++ ML+ SDN IA+ +FR +G Sbjct: 257 LQEIGVEFWGEI-RYDEVPFNANLLYTNHSPPLINIIQQMLETSDNQIAEQIFRNLGAIY 315 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 N G + ++++++ G D + +I DG GLS +NL+ P + L Y+ Sbjct: 316 GN--GKIEDSENHFQKVIKETLGYDPTDYVIKDGCGLSMYNLLPPKMISDTLFYLYSK-Y 372 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + F L +L+ R ++ AKTG+L ++G + SG+ F Sbjct: 373 QSKFFDYLASPYEKSTLENRFNF-------EIYAKTGTLYYDSAISGIFKSKSGKYYIF 424 Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 4/122 (3%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 + ++ +G + +Y+S ++ +PAS K+ITAL AL LG +++F T + G + Sbjct: 100 VGFELRDLGTNEVLFNYNSDKLFIPASNTKLITALVALESLGDNYKFETKIYHTGEISPN 159 Query: 96 VLKGDLVARFGADPTLKRQDIRNMV--ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 +G+L + DP L + ++ AT+ + G+ +I G+++ D S GW W Sbjct: 160 -FRGNLYIKGFGDPVLTSLQYKEILKRATVDR-GIKRIYGDIIFDYSFMTEEGFGRGWMW 217 Query: 154 ND 155 +D Sbjct: 218 DD 219 >UniRef50_B4VTW2 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VTW2_9CYAN Length = 453 Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 50/89 (56%) Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS KV T+LAAL GPD +F T + G VENGVL+GDLV G DP ++ + Sbjct: 115 ASITKVATSLAALQTFGPDHQFITLIGATGAVENGVLQGDLVIEGGDDPFFVWEEAIALG 174 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 L + G+ Q+ GN++I + + + P Sbjct: 175 NLLNQMGIQQVAGNLIITGKFYMNFEFEP 203 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 T... 642 0.0 UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax... 603 e-171 UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 469 e-131 UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Ta... 467 e-130 UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Phot... 438 e-121 UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibr... 422 e-116 UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grim... 420 e-116 UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 417 e-115 UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 413 e-114 UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 412 e-113 UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1... 412 e-113 UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 411 e-113 UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 411 e-113 UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 403 e-111 UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 403 e-111 UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 403 e-111 UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B;... 403 e-110 UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 400 e-110 UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 400 e-110 UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibr... 398 e-109 UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 398 e-109 UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio ... 397 e-109 UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B;... 395 e-108 UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 395 e-108 UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 391 e-107 UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 388 e-106 UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 386 e-106 UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 385 e-105 UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 385 e-105 UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella ... 385 e-105 UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 385 e-105 UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 384 e-105 UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 383 e-105 UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 382 e-104 UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 382 e-104 UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 379 e-103 UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 378 e-103 UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 376 e-103 UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 376 e-102 UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 376 e-102 UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 375 e-102 UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 375 e-102 UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 373 e-102 UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax... 373 e-102 UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 373 e-102 UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 373 e-101 UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 370 e-101 UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1... 370 e-101 UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Baci... 369 e-100 UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 369 e-100 UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candida... 368 e-100 UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 367 e-100 UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkhol... 366 e-100 UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 366 e-100 UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 366 e-100 UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 366 e-100 UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 366 1e-99 UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 366 1e-99 UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ocea... 366 1e-99 UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 365 2e-99 UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxal... 364 3e-99 UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 364 4e-99 UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, pepti... 363 7e-99 UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptida... 363 7e-99 UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 362 1e-98 UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 361 2e-98 UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 361 4e-98 UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 360 9e-98 UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 359 1e-97 UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acti... 358 3e-97 UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 355 2e-96 UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 355 3e-96 UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 353 6e-96 UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bact... 352 2e-95 UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 352 2e-95 UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 famil... 351 3e-95 UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenel... 351 4e-95 UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 349 1e-94 UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 348 2e-94 UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 348 2e-94 UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 348 3e-94 UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 348 3e-94 UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 347 5e-94 UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candida... 346 7e-94 UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax... 346 9e-94 UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 346 1e-93 UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillu... 346 1e-93 UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 345 2e-93 UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family ... 345 2e-93 UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 345 3e-93 UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 344 5e-93 UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolys... 343 6e-93 UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 343 7e-93 UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 343 7e-93 UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocyst... 343 9e-93 UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 343 1e-92 UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 342 1e-92 UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 341 3e-92 UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 341 3e-92 UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 341 5e-92 UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 338 2e-91 UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5... 337 5e-91 UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acid... 337 5e-91 UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 337 5e-91 UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type... 337 5e-91 UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 337 6e-91 UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 T... 336 8e-91 UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 336 1e-90 UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acar... 335 2e-90 UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 333 8e-90 UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) fami... 332 2e-89 UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 331 3e-89 UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 331 3e-89 UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 331 3e-89 UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 329 1e-88 UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax... 329 2e-88 UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Ta... 328 4e-88 UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ther... 325 2e-87 UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 325 2e-87 UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria ... 324 4e-87 UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 323 9e-87 UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 323 1e-86 UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fuso... 323 1e-86 UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 322 2e-86 UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 321 4e-86 UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 320 6e-86 UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 320 6e-86 UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 319 1e-85 UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 317 5e-85 UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-a... 317 6e-85 UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 315 2e-84 UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 314 5e-84 UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 313 7e-84 UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 313 1e-83 UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 311 3e-83 UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flav... 311 3e-83 UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 310 8e-83 UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 309 1e-82 UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 308 2e-82 UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisel... 307 6e-82 UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 305 2e-81 UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase ... 304 4e-81 UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porp... 303 1e-80 UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alca... 303 1e-80 UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 301 3e-80 UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 301 5e-80 UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1... 299 2e-79 UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 296 1e-78 UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine c... 296 1e-78 UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 291 4e-77 UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvula... 289 2e-76 UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 289 2e-76 UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 288 3e-76 UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flav... 287 6e-76 UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 287 8e-76 UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 286 2e-75 UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 283 9e-75 UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 283 1e-74 UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 282 2e-74 UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 281 3e-74 UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 281 4e-74 UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 280 8e-74 UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 280 1e-73 UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 277 8e-73 UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 274 5e-72 UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 273 1e-71 UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 270 7e-71 UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1... 269 2e-70 UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase ... 266 2e-69 UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 264 7e-69 UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 262 1e-68 UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 262 2e-68 UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 262 2e-68 UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 259 2e-67 UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 259 2e-67 UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 259 2e-67 UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=... 259 2e-67 UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 255 3e-66 UniRef50_B2T8J3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=2... 252 2e-65 UniRef50_D1UR62 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 250 9e-65 UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 250 1e-64 UniRef50_A3I000 Hypothetical D-alanyl-D-alanine carboxypeptidase... 249 2e-64 UniRef50_Q5ZVH0 Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax... 249 2e-64 UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 249 2e-64 UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precurs... 246 2e-63 UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 245 3e-63 UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 245 3e-63 UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 240 7e-62 UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 240 7e-62 UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type... 240 1e-61 UniRef50_Q47KT6 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 240 1e-61 UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thi... 238 4e-61 UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2... 237 8e-61 UniRef50_C0ZYE1 Putative D-alanyl-D-alanine carboxypeptidase n=1... 237 8e-61 UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 233 1e-59 UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 232 2e-59 UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 231 5e-59 UniRef50_B4V6I2 Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax... 230 7e-59 UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 229 1e-58 UniRef50_A4AQH7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 229 2e-58 UniRef50_C4LKM4 Putative penicillin-binding protein 4 n=1 Tax=Co... 228 4e-58 UniRef50_D2QFU8 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 228 4e-58 UniRef50_A4CNT5 Putative uncharacterized protein n=1 Tax=Robigin... 227 9e-58 UniRef50_C5PW65 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 225 2e-57 UniRef50_D2S5C3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 225 4e-57 UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxyp... 224 9e-57 UniRef50_C0VXH6 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Cory... 221 5e-56 UniRef50_Q3AXV2 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 219 2e-55 UniRef50_C7PJX0 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 219 3e-55 UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alan... 217 1e-54 UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 216 2e-54 UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 216 2e-54 UniRef50_A6EDL0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 215 2e-54 UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 215 3e-54 UniRef50_D0LZE4 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 213 1e-53 UniRef50_Q0FY12 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 212 3e-53 UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Co... 212 3e-53 UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1... 211 5e-53 UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 ... 210 1e-52 UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 208 3e-52 UniRef50_UPI0001B57B89 hypothetical protein StAA4_36716 n=1 Tax=... 208 4e-52 UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alan... 207 9e-52 UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 203 1e-50 UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 203 1e-50 UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax... 199 3e-49 UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces R... 197 5e-49 UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 196 1e-48 UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 196 2e-48 UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=De... 195 4e-48 UniRef50_B8DWB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 193 1e-47 UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Co... 193 2e-47 UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alan... 191 6e-47 UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 190 8e-47 UniRef50_Q1J234 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 190 9e-47 UniRef50_B3DR07 D-alanyl-D-alanine carboxypeptidase n=11 Tax=Bif... 190 9e-47 UniRef50_Q46L11 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Proc... 189 2e-46 UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 187 7e-46 UniRef50_C9PY01 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Prev... 187 1e-45 UniRef50_C0BK36 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 187 1e-45 UniRef50_C5VM55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 183 1e-44 UniRef50_D1Y0J6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 181 4e-44 UniRef50_D2NQQ1 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Roth... 179 2e-43 UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Cory... 178 3e-43 UniRef50_B9TF38 D-alanyl-D-alanine carboxypeptidase, putative (F... 178 4e-43 UniRef50_C2CX37 Possible D-alanyl-D-alanine carboxypeptidase (Pe... 177 7e-43 UniRef50_D2RBZ9 Putative D-alanyl-D-alanine carboxypeptidase/D-a... 177 1e-42 UniRef50_C2BSG4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 176 2e-42 UniRef50_C8NYS1 Penicillin-binDing protein, d-ala-d-ala carboxyp... 175 3e-42 UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 175 4e-42 Sequences not found previously or not previously below threshold: UniRef50_A1B1N0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 202 4e-50 >UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 Tax=Gammaproteobacteria RepID=DACB_ECOLI Length = 477 Score = 642 bits (1655), Expect = 0.0, Method: Composition-based stats. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP Sbjct: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV Sbjct: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS Sbjct: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE Sbjct: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK Sbjct: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS Sbjct: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS Sbjct: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN Sbjct: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 >UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax=Enterobacteriaceae RepID=C9XU16_CROTZ Length = 478 Score = 603 bits (1554), Expect = e-171, Method: Composition-based stats. Identities = 396/477 (83%), Positives = 444/477 (93%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRF +GLT+ +A + AANV+EYI QLPAGANLALMVQKVGAS+P ID+HSQQMALP Sbjct: 2 MRFSRFAVGLTTSVALNASAANVEEYINQLPAGANLALMVQKVGASSPEIDFHSQQMALP 61 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAAL+QLGPD+RFTTTLE++G+V +GVL GDL+ARF DPT KRQD+RNMV Sbjct: 62 ASTQKVITALAALLQLGPDYRFTTTLESRGDVRDGVLDGDLIARFTGDPTFKRQDMRNMV 121 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LKK+GV QI GNVLIDTS FASHDKAPGWPWNDMTQCFSAPP+AAIVDRNCFSVSLYS Sbjct: 122 TALKKAGVQQIKGNVLIDTSAFASHDKAPGWPWNDMTQCFSAPPSAAIVDRNCFSVSLYS 181 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 AP+ G+ AF+R+ASYYPVT++SQV+TLPRGS+EAQYCELDVV GDLNR+TLTGC+ QR++ Sbjct: 182 APQAGEPAFVRIASYYPVTVYSQVKTLPRGSSEAQYCELDVVTGDLNRYTLTGCMTQRAD 241 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFA+QDGA YAGAILK ELKQAGIT++GTLLRQTQ NEPGTV+AS+QS PLHDLL+ Sbjct: 242 PLPLAFAIQDGAGYAGAILKAELKQAGITYNGTLLRQTQPNEPGTVIASRQSPPLHDLLR 301 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 +MLKKSDNMIADTVFR IG + VPGTWRAGSDAVRQILRQ+AGVD+GNTI+ DGSGLS Sbjct: 302 VMLKKSDNMIADTVFRTIGRNFYGVPGTWRAGSDAVRQILRQKAGVDLGNTIVVDGSGLS 361 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIA++D++LNFISMLPLAG+DGSL YRAGLH+AGVDGKVSAKTGS Sbjct: 362 RHNLIAPATMMQVLQYIARNDSQLNFISMLPLAGHDGSLLYRAGLHEAGVDGKVSAKTGS 421 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEP DQRNRRIPLVRFESRLY+D+YQNN Sbjct: 422 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPTDQRNRRIPLVRFESRLYRDLYQNN 478 >UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQB2_9PAST Length = 489 Score = 469 bits (1208), Expect = e-131, Method: Composition-based stats. Identities = 193/461 (41%), Positives = 295/461 (63%), Gaps = 3/461 (0%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 F+ + +V LP G + +++ + + + ++ + LPASTQKV+TAL A + Sbjct: 32 FAYTSVDVSSLNQVLPDGTSSSVIAKNLTRNEIIAEHQANTFMLPASTQKVLTALTAKLA 91 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 L +FRF T+L T G V+ LKGDL+ RF DP L + N++A LKK + +I GN+ Sbjct: 92 LSDEFRFETSLLTNGKVQGNTLKGDLIVRFTGDPDLTSGQLSNLLAQLKKQKITKITGNL 151 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 ++DT++F SHD+ GW WND+T CF+APPAA +D NCF + L + G+ I + + Sbjct: 152 ILDTAVFTSHDRGLGWIWNDLTMCFNAPPAAVNIDNNCFYLELDANQAIGESVKINIPAQ 211 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 YPV +F QV + EA YC+LDV+ D NR+ + GCL ++++P L+FA+QD ++Y Sbjct: 212 YPVQVFGQVYVASQ--QEAPYCQLDVMVNDNNRYQVKGCLARQNKPFGLSFAIQDPSAYG 269 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 A+++ +LK+ GI ++G + + + G ++A S PL DL+K M+KKSDN IAD +F Sbjct: 270 AAMIQRQLKRLGIEFNGKVQTPL-MQQKGQLLAQHFSKPLPDLIKKMMKKSDNQIADALF 328 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 R + + P +++ GS A+RQIL +AG+ + N+IIADGSGLSRHNLI+ M+QVL Sbjct: 329 RSVAFHYYKRPASFQLGSQAMRQILHSKAGIKLSNSIIADGSGLSRHNLISANLMLQVLD 388 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 YIA+++ L + P+AG DG+L R L + V AKTG+L+GVYNLAGF+T + Sbjct: 389 YIAKNEATLKLMDSFPIAGVDGTLSGRGSLINPPLVKNVIAKTGALKGVYNLAGFMTNSR 448 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 + +AFVQ+++GY+ + + +R PLV+FES LY +Y+ Sbjct: 449 NETLAFVQFINGYSTGDFESKTKRAPLVQFESGLYNTLYKE 489 >UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Tax=Pasteurellaceae RepID=DACB_HAEIN Length = 479 Score = 467 bits (1203), Expect = e-130, Method: Composition-based stats. Identities = 203/472 (43%), Positives = 310/472 (65%), Gaps = 6/472 (1%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAST 63 S + S F+ NV + +LP G+N+ + + + + DY+ L AST Sbjct: 13 SFLLSVSFSLPTFA--NINVSDLTQKLPEGSNVGFIAKNINQNQIIADYNGSTFMLSAST 70 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 QKV TA+AA + L F+F T L + G ++NG L G+L+ RF DP L R + +++A L Sbjct: 71 QKVFTAVAAKLALDDQFQFETALLSNGKIQNGNLDGNLIVRFTGDPDLTRGQLYSLLAEL 130 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 KK G+ +I+G++++DTS+F+SHD+ GW WND+T CF++PPAAA +D NCF L + Sbjct: 131 KKQGIKKINGDLVLDTSVFSSHDRGLGWIWNDLTMCFNSPPAAANIDNNCFYAELDANKN 190 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 PG++ I V + +P+ +F QV S EA YC+LDVV D NR+ + GCL ++ +P Sbjct: 191 PGEIVKINVPAQFPIQVFGQVYVAD--SNEAPYCQLDVVVHDNNRYQVKGCLARQYKPFG 248 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 L+FAVQ+ +YA I++ +L+Q GI ++G +L Q + G ++A S PL DLLK M+ Sbjct: 249 LSFAVQNTDAYAAEIIQRQLRQLGIEFNGKVL-LPQKPQQGQLLAKHLSKPLPDLLKKMM 307 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 KKSDN IAD++FR + + P +++ G+ AV+ IL Q+ G+ GN+I+ADGSGLSRHN Sbjct: 308 KKSDNQIADSLFRAVAFNYYKRPASFQLGTLAVKSIL-QKQGIRFGNSILADGSGLSRHN 366 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 L+AP TM+ VL+YIA+++++L+ + P+AG DG++ R GL + V AKTGSL+G Sbjct: 367 LVAPKTMLSVLEYIAKNEDKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKG 426 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 VYNLAGF+T A G+++AFVQ+++GY+ + + +R PLV+FE LY ++Y+ Sbjct: 427 VYNLAGFMTNARGEKVAFVQFINGYSTGDLESKTKRAPLVQFERNLYNELYK 478 >UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Photobacterium RepID=D0YZY0_LISDA Length = 464 Score = 438 bits (1126), Expect = e-121, Method: Composition-based stats. Identities = 169/474 (35%), Positives = 271/474 (57%), Gaps = 14/474 (2%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEY-ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 F + + + AA + I +LP G +LAL+++ + + PA Sbjct: 2 FKQLLCVSLLATSLPTLAAFNPQAAIAKLPQGHDLALLIKDPATGKIIYQQRTDNLQAPA 61 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 STQK ITALAA + LG +FRF T +ETKG D++ F DPT R D+R +++ Sbjct: 62 STQKTITALAAKLYLGDNFRFYTDVETKGK--------DIIFNFSGDPTFSRTDLRELLS 113 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 +K G I GN+ ++ F +++ GWPW+ + C+SAP ++ ++ NC +LY+ Sbjct: 114 QIKAKGYKSIQGNIYLNGGHFTGYERGIGWPWDILGSCYSAPSSSITLEHNCVQGALYTN 173 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 G+ A I V S+ P+ + S + +AQ+C+LD++ N + ++GC EP Sbjct: 174 KGIGNKARINVPSHQPIQVTSTATIVTPSQKKAQFCQLDLISNPNNSYQVSGCSLAYKEP 233 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 +PL FAVQ+ Y A+++ ELK+AGI++ G + R + G +A S P+ +LL I Sbjct: 234 MPLKFAVQNTTKYTMAVMRQELKRAGISFKGQIYRNDTI--KGQRIARNSSKPMSELLDI 291 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 MLK+SDN+ AD + + IG + PG++ G A+++IL+ +A +D+ +TI+ DGSGLSR Sbjct: 292 MLKRSDNLFADNIAKTIGAKYYQQPGSYNNGVAAIKEILKTKANIDLSDTIMVDGSGLSR 351 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +N ++ +MQV+ YI +H N L P+AG G+L+YR + + GKV AK+GSL Sbjct: 352 NNRLSANDLMQVITYIYKHKN-LKLFDDFPVAGESGTLRYRKSMRAGELKGKVIAKSGSL 410 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 YNLAG I T SG+ + F+Q ++ Y P ++ P+ +FE +LY+ +YQ Sbjct: 411 FATYNLAGMIKTKSGKPLLFIQLVTDY--HPINKTKGLPPISQFEQKLYQSLYQ 462 >UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibrio RepID=D0M7Y1_VIBSE Length = 473 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 172/480 (35%), Positives = 277/480 (57%), Gaps = 16/480 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHS-QQMAL 59 MR ++ +S ++ QA E LP G+ ++L+ +K+ +A H +Q+ Sbjct: 1 MRLRWPLLIFSSLLSAFSQAYPHQEV---LPEGSRISLVAEKLSENAELDGVHPTEQLFP 57 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K++TALAA ++LG +FRF T LE + D V F DPTL+ D++++ Sbjct: 58 PASTLKIVTALAAKLELGDNFRFRTKLEASSS--------DAVIYFVGDPTLQTNDLKSL 109 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + KK+G+ +IDG++ +D S F +++A GWPW+ + C+SAP + ++ NC S+Y Sbjct: 110 LTLAKKNGLKRIDGDLWLDNSAFTGYNRAVGWPWDILGVCYSAPASTITLNNNCVQASIY 169 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + G + V + P+ + S V T+ + ++++C+L +V N + LTGCL +R Sbjct: 170 TQKDGGT--RVYVPEHQPIRVTSTVETVSKTIKKSRHCDLGLVANPDNNYKLTGCLVERD 227 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 +PLPL FAVQD Y L LKQ I SG + + + ++A QS L D+L Sbjct: 228 KPLPLKFAVQDPELYTSHRLAALLKQLNIELSGKIRIGSAPEKQRKLIAMHQSEALTDIL 287 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 + MLK SDN+IADT+ + +G F G++ G++A++QI+ G+DI N + DGSGL Sbjct: 288 EEMLKNSDNLIADTLTKTLGAKFFVQSGSFANGTEAIKQIIFANTGIDIRNARLEDGSGL 347 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SR+N I+ M ++L+YI QH++EL I+++P +G G+L+YR + + + G++ AK+G Sbjct: 348 SRNNRISATKMAEILRYIWQHEDELKLIAIMPKSGESGTLKYRQSMRKLPIKGQLIAKSG 407 Query: 420 SLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEP-ADQRNRRIPLVRFESRLYKDIYQNN 477 SL G YN+AG+ +GQ FVQ++S Y E D + P+ FE Y DI + Sbjct: 408 SLYGTYNMAGYGLDKNGQPNTVFVQFVSDYFPEKRDDNKPVIAPITHFEQLFYSDIVNFS 467 >UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I802_VIBHO Length = 471 Score = 420 bits (1081), Expect = e-116, Method: Composition-based stats. Identities = 179/474 (37%), Positives = 272/474 (57%), Gaps = 13/474 (2%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 I L ++F+ A +++ LPAG+ LAL V A A + + PASTQK Sbjct: 5 LIFFLLLPLSFATSAVPLNKIEAMLPAGSQLALSVYDASARAKIVSVDDDILLPPASTQK 64 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 V+TALAA + L PDF F TTL G DLV F DPTL R DIR +++ LK Sbjct: 65 VVTALAATLSLPPDFTFDTTLGQVGQ--------DLVFTFSGDPTLTRNDIRLLISALKA 116 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG 185 G+ I G++ +D SIF+ H++A GWPW+ + C+SAP +A ++RNC ++YS K Sbjct: 117 KGIQHIRGDIWLDGSIFSGHERAVGWPWDILGVCYSAPSSAIALERNCVQGAIYS-EKNQ 175 Query: 186 DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 + V + PV + + + + E C+L++ N + L+GCL RS PLPL Sbjct: 176 PHTRVFVPEHQPVKVTTDAMAVTQSQQEQSLCDLELHYDSNNHYQLSGCLAHRSTPLPLK 235 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 FA+Q+ Y IL+ ELK A I G + + T++A +S LL+ MLK+ Sbjct: 236 FAIQNPQKYVQDILQAELKTAAIIVDGKI-KTGSPTGTRTLLAKHRSDNRDALLETMLKR 294 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 SDN+IAD + ++IGH +N PGT+ G+ A++ IL ++ G+D+ + +I DGSGLSR+N + Sbjct: 295 SDNLIADNLLKIIGHRYYNQPGTFANGAAAIKAILLEKTGIDLTHAVIVDGSGLSRNNRM 354 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 + +M VLQY+ H L ++MLP++G DG+L+YRA + A + ++ AKTGSL G Y Sbjct: 355 TASQLMDVLQYVYAHPQ-LGLLAMLPVSGVDGTLKYRASVRHAPLKQRLIAKTGSLYGSY 413 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEPADQR--NRRIPLVRFESRLYKDIYQNN 477 NLAG + G+ + VQ ++ Y + + R N P+ +FE LY+ + ++ Sbjct: 414 NLAGVLKNDLGKDLLVVQLVTNYHIPETEDRPDNVASPITQFERELYQALLTSS 467 >UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Coxiella burnetii RepID=A9NBH1_COXBR Length = 477 Score = 417 bits (1071), Expect = e-115, Method: Composition-based stats. Identities = 140/477 (29%), Positives = 239/477 (50%), Gaps = 14/477 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQAA-------NVDEYITQLPAGANLALMVQKVGASAPAIDYH 53 M+ ++ L S + A N++ + + + ANL +V V Sbjct: 1 MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 SQ + PASTQK+ TA+AAL LG D++FTT L T G ++ L+G+L +F DP L Sbjct: 61 SQFLFSPASTQKLFTAVAALYYLGSDYQFTTALLTNGAIKGQTLQGNLTLKFSGDPELTT 120 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +D+ ++ LK+ G+++I G+V ID + + PGW +D++ ++AP +A I++RN Sbjct: 121 EDLNRLIEKLKELGIHRISGHVYIDNTAYNDVPYPPGWMLDDLSYGYAAPVSAIIINRNK 180 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 F + + A K + + P + + + + + C L V + N + L G Sbjct: 181 FLLHILPAKKGNAQPTL--SPILPAGVAHFSNRVRTTAHQIKQCPLTVYSDNRNNYQLAG 238 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 C+ + A+++ YA +LK L I + G +L + V+A +S Sbjct: 239 CINRAWGQQRRTLAIRNPVIYANVLLKQALADNVIQYQGPILLAG-SSANDVVLAEHKSP 297 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL +LK MLK SDN+ D++ + +G + PGTW+ G A+++IL + G+D N +I Sbjct: 298 PLRHMLKEMLKNSDNLTTDSLLKKMGERFYKKPGTWQNGLHALKKIL-EPTGIDFKNNLI 356 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 DG+GLSR+NL++P M ++L++ + LP+ G DG+L R + Sbjct: 357 NDGAGLSRYNLVSPDQMAKLLRFAYNQKTIRDPLLKALPIGGKDGTLAGR--MRSIANSE 414 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +V AKTGS+ GV LAG++ T + ++F ++G+ E + L F + Sbjct: 415 RVHAKTGSMAGVSALAGYLRTRQNKVLSFAIMINGFVGETHAYSHLEDRLCEFLVKF 471 >UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Psychromonas RepID=A1SZR5_PSYIN Length = 480 Score = 413 bits (1061), Expect = e-114, Method: Composition-based stats. Identities = 171/479 (35%), Positives = 269/479 (56%), Gaps = 6/479 (1%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 F R + + ++ A LP G L+ +V + + +++ + PAS Sbjct: 2 FKRILCFALFLLPVNLLADQWSALHALLPKGTQLSYLVLDPANNQLLAESNAEILRTPAS 61 Query: 63 TQKVITALAALIQLGPDFRFTTTLET-KGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 QK++TA AA + LG +FR+ TTLE K +++N +GD+ RF DPTL R DI+ M+ Sbjct: 62 LQKLLTATAAKLYLGENFRYQTTLEGNKSHIKNNHYQGDIRLRFVGDPTLSRADIKEMLT 121 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 + K GV QI G++LI+ + F+ + + G WND+ C+++P A IV+RNC +L Sbjct: 122 SFKALGVKQIRGDLLINAAHFSGYQWSDGQAWNDLGVCYTSPSNAIIVNRNCVLGNLSVV 181 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 A + + SY PV + S V + + Q+C L + NR+ L GC+ R+ P Sbjct: 182 SADAKKARLFIPSYEPVEISSNVDVVTSAQRDEQFCALKMTRNSDNRYHLWGCMVPRNRP 241 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT--QVNEPGTVVASKQSAPLHDLL 299 LAF+V D +YA I++ ELK GI +G + + + V+ QS L LL Sbjct: 242 FGLAFSVNDPFAYASQIIESELKNVGIKLTGKVKIEQIKTAKKVSQVLVKYQSPELGKLL 301 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 +IMLK SDN+IAD++F+ +G A F G + G+ A++ IL++ GVD+ N +ADGSGL Sbjct: 302 EIMLKDSDNLIADSLFKTLGAAYFQQDGNFLNGAKALKLILQEN-GVDLENAYLADGSGL 360 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SRHNL++ M VL+Y+ Q+D +LN + +AG DG+L Y G+ + G + AKTG Sbjct: 361 SRHNLMSAKLFMTVLKYVYQNDAKLNLLDSFSIAGVDGTLHYHKGVAGPLLKGNIVAKTG 420 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD-QRNRRIPLVRFESRLYKDIYQNN 477 S++GV NL G + TA G+R+ F ++GY D + + P+V FE ++ I +++ Sbjct: 421 SMKGVANLLGIVKTARGERL-FALIINGYNWPETDLTKATKSPVVIFEHAFFETIIKSS 478 >UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Shewanella RepID=A0KWP7_SHESA Length = 513 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 155/474 (32%), Positives = 246/474 (51%), Gaps = 11/474 (2%) Query: 1 MRFSRFIIGLTSCIAFSV-----QAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQ 55 + + L S A + ++ + P + +AL+ + + + + Sbjct: 22 LLLGSLVSMLLSTQAHAAIHPMDESILAKQIADIAPRHSQVALLARDLSTNTLLYSQQAD 81 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + +PASTQKV+TA+ AL LGPDFR+ T L + + G + G + RF DPTL + D Sbjct: 82 TLFIPASTQKVLTAVTALATLGPDFRYVTELWSDAPIRQGHIAGSVYLRFSGDPTLTQDD 141 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 ++ + A L+K G+ I+G++ + +APGW W+D+ CF+AP ++ I+++NC Sbjct: 142 LKALFAHLQKQGITSIEGHLYL-IGDKQEQLQAPGWVWDDLGICFAAPVSSYIINQNCVY 200 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 + AS + V + S P+ + +C+LD+V N++ L GC Sbjct: 201 GQFAPSSAKHASEVKLRASSFGVKVSSDAIFSPKAGHD--FCQLDLVRLGQNQYHLRGCY 258 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 P +E +PLA A+ D +A L LK ++ SG + + ++AS SAPL Sbjct: 259 P-GNEAIPLAIAISDPEKFAMDTLTATLKGE-MSLSGKVKIGNAIPSKAKLIASHSSAPL 316 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +LLK ML KSDN+IAD++F+ +G + + G++ G+ A+R IL + G+D+ N I D Sbjct: 317 PELLKTMLLKSDNLIADSLFKRVGQSYYKAQGSFTHGAAAMRHILTE-LGIDLTNANIVD 375 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+NL++ + VL I Q + I LP AG G+LQYR G + + +V Sbjct: 376 GSGLSRYNLLSAKQLADVLALIYQDARFHSLIDSLPEAGVSGTLQYRLGYTKPPLKHRVF 435 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 AKTGS+QGV NLAGF+ A + + FV +G + E QR L Sbjct: 436 AKTGSMQGVANLAGFMRLAQQRDILFVVLENGISPETKKQRKPAFSADFLTRLL 489 >UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE58_BREBN Length = 964 Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 121/455 (26%), Positives = 229/455 (50%), Gaps = 10/455 (2%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 +S +A ++ D + G + V + +++++ +PAS K+ T + Sbjct: 37 SSPLALHIEKFLADLKNDENSKGMYAGIAVYDLTEKRYVYKHNAERNFVPASNMKLFTTI 96 Query: 71 AALIQLGPDFRFTTTLETKGNVENG-VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 A + +LGPD+++ T + G V NG +L+GDL+ + DP+LK +D++ M +K G+ Sbjct: 97 AGMDKLGPDYQWKTEVFVSGKVNNGGILQGDLILKGYGDPSLKPEDLQQMAKAIKDLGIK 156 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 +I+GN+L+D S F W W+D +SA + V++N +++ D Sbjct: 157 RINGNLLLDDSYFDETRLGTSWMWDDEPYGYSAQISGLAVNKNVTTLTATPGKTVNDAPV 216 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + + P T + V + +A + L P + ++G + ++ P ++ Sbjct: 217 L---TMNPATTYITVTNQLKTTAGKESNVLVERPRGKSEIIVSGTIGVQAAPYDEDVTME 273 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 D A Y G + KD+L++ GI + V + G + + S PL ++ + K+SDN Sbjct: 274 DPAFYVGDLWKDQLQKQGIALHPKAEVKKTVLQSGVPLYTHLSKPLGEITVELNKESDNF 333 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ + + +G + G++ AGS+AV +++ +AG++ DGSGLSR N I P Sbjct: 334 YAEMLVKTLGVTQKG-EGSFEAGSEAVADVMK-RAGIE-SGFRQVDGSGLSRFNWITPEQ 390 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M++ L ++ + + LP+AG DG+L+ R + + + AKTGSL GV ++G Sbjct: 391 MIEALIFLQEQEYRTELEKSLPIAGVDGTLKNR--MKGTSAEKNLVAKTGSLSGVNTMSG 448 Query: 430 FITTASGQRMAFVQYLSG-YAVEPADQRNRRIPLV 463 ++T +G ++AF ++G Y + A + RI ++ Sbjct: 449 YVTAKNGHKLAFSILINGIYKSKYARELQDRIGIL 483 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 116/444 (26%), Positives = 207/444 (46%), Gaps = 23/444 (5%) Query: 20 AANVDEYITQL-PAGANLALMVQKVGA--SAPAIDYHSQQMALPASTQKVITALAALIQL 76 +A +D + AG ++++ + + + + PAS K++T AL QL Sbjct: 507 SAMIDPILDTPEAAGVTAGILIKSLDTTGDPVLYERDADTLLTPASNLKLLTTATALNQL 566 Query: 77 GPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD---------IRNMVATLKKS 126 G D+ F T + + +G+ +G+L + DPTL ++ I + LK+ Sbjct: 567 GSDYVFKTEVFGDAPITSSGIQQGNLYVKGYGDPTLHTENALQVQEGVSIEKIAGWLKQQ 626 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +I+GN+++D S F GW W+D + ++ A ++R + A G Sbjct: 627 GITRINGNLVMDDSYFDQQRLGLGWAWDDESYYYNPTIGALALNRGTVMIEFKPANDAGK 686 Query: 187 MAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 I V V + ++ +T+ +G D N L G LP E Sbjct: 687 PVDINVLPKTAYVQVINEAKTVQKGEENTFAILRDR---GTNTIRLLGNLPLDHEGDYER 743 Query: 246 FAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 V++ A Y G +LK+ L+Q GI ++ + + QV +S PL D+++ + K Sbjct: 744 VPVEEPAKYVGTVLKETLQQQGIAFAPKSEVLIQQVPPAAVKWTQFESLPLKDIVQYLNK 803 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +SDN A+ + + +G A+ G+ +G++ V++ + G + DGSGL+R+NL Sbjct: 804 RSDNYYAEMLLKTLGAAKKGK-GSAASGAEVVQEAVASLGG--NTTFDMMDGSGLTRYNL 860 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I+ + VL+ + + + LP+AG DG+L+ R L + AKTGS+ GV Sbjct: 861 ISARQIASVLEGMTKESTFAAYDESLPIAGIDGTLKNR--LKDTPAANNLHAKTGSMTGV 918 Query: 425 YNLAGFITTASGQRMAFVQYLSGY 448 L+G+ITT G+++ +GY Sbjct: 919 NTLSGYITTKGGEKLIVSILFNGY 942 >UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PF66_BACCO Length = 495 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 126/468 (26%), Positives = 216/468 (46%), Gaps = 18/468 (3%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 C A G +A+ V+ + + + + PAS K++TA AA Sbjct: 30 CGKKETDAKIAGILEAAPLKGGIVAISVRSADSGKLLYEQNGNTLLRPASNMKLLTAAAA 89 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L LG + RF T + G ++NG L GD+ + G DP L + D+ + A LKK G+ +I Sbjct: 90 LETLGKNTRFKTGVYRTGAIQNGTLYGDIYIQGGGDPALLKSDLADWAAELKKQGIRRIQ 149 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN------CFSVSLYSAPKPGD 186 G+++ D S + + PW+D + + A +A + N + A KPG Sbjct: 150 GDLVGDDSRYDDTRYSLDLPWSDEQEYYGAQISALTLSPNRDYDAGTAIFEVVPAKKPGM 209 Query: 187 MAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 A I++ V + + VRT+ G + + G N FT +G + S + Sbjct: 210 KARIKMVPESGMVKLVNHVRTVRDGEQQEDDIVISRAHGG-NTFTASGTITADSAAVRQW 268 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 AV D A + ++ K L++ GIT GT+ + +V + V QS PL ++ LK Sbjct: 269 KAVWDPAKWVLSVFKKTLEENGITVQGTI-KTGRVKDAAVPVLFSQSPPLSSIMVPFLKF 327 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 S+N IA+ + + +G G+W G + +R + G+D ++ DGSG+S +L+ Sbjct: 328 SNNTIAEMLVKEMGKTEKG-EGSWEKGLEVIRSV-AGNFGMDPDQMMLRDGSGISHADLV 385 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGS 420 + +L I + D F LP+AG + G+L+ R G+V AKTGS Sbjct: 386 RANDLTALLYRIQEKDWFPCFFDALPVAGAENRLEGGTLRNR--FKGTAARGQVFAKTGS 443 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 + GV L+G++ SG+++ F ++ E A + +++F ++ Sbjct: 444 ITGVSTLSGYMQATSGEKLIFSILINNVLDEEAVHQAEEQIVLQFINQ 491 >UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2B8_9GAMM Length = 465 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 159/448 (35%), Positives = 257/448 (57%), Gaps = 15/448 (3%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 LP G+ +++V + + +++ S + PAS QK++TALAA +QLG DF FTT +E K Sbjct: 33 LPTGSEASILVVESNTNKTLLNHRSDTLRPPASVQKLVTALAATLQLGTDFTFTTDIEAK 92 Query: 90 GNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 D++ RF DP+L+R +IR +VA LK + I GNV ++ S F ++A Sbjct: 93 DQ--------DVIFRFSGDPSLRRDNIRQLVARLK-RDRSVIRGNVYLNGSAFNEFERAD 143 Query: 150 GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 GWPW+++ C+SAP ++ +D NC + K ++ P+ + + L Sbjct: 144 GWPWDNLGVCYSAPASSISLDDNCAVAKMVFKDKESTKLGFEISRDAPINIIENLDLLD- 202 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 E +YC ++ + N+F L GC+ + P L+FA+Q+ Y +++ EL+ AGI Sbjct: 203 -GLEKRYCNFKLLADNTNQFKLGGCIGRHEIPRFLSFAIQNTELYVAEMIRRELEHAGIE 261 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 G ++R + G V+A +SA L L+ M+K SDN+IAD + + IG FN PG++ Sbjct: 262 LQGNIIRNDR--AEGKVIARHESASLPVLIDEMVKDSDNLIADNLLKTIGRHYFNEPGSF 319 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G A++ +L+QQAG+D ++ADGSGLSR+N + +MQ+LQY+ H ELN ++ Sbjct: 320 DNGVAAIKAVLKQQAGIDFSAAVLADGSGLSRNNRMTTHHIMQILQYVYSHP-ELNLMAA 378 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 + ++G G+L+YR L + V KTGSL G +N+AG +T +G+ + FVQ ++ Y Sbjct: 379 MAVSGKSGTLRYRYSLRTDELRNNVKGKTGSLFGTFNIAGVLTAKTGKDLLFVQLVTNYH 438 Query: 450 VEPADQRNRRIPLVRFESRLYKDIYQNN 477 P R+ + + RFE +LY+ +Y NN Sbjct: 439 -HPDFHRHEKREIRRFERKLYQSLYSNN 465 >UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Shewanella RepID=A3QED0_SHELP Length = 543 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 152/447 (34%), Positives = 247/447 (55%), Gaps = 11/447 (2%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P + L++ Q + + +++ + LPASTQK++TA+AA+ LG +F F T TKG Sbjct: 84 PPHSQLSIFAQDLSNNEILYQHNADTLVLPASTQKLLTAVAAMRVLGEEFSFATQFSTKG 143 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + +GVL GDL F DPTL D+R M+ +LK +G++ + GN+L+ +APG Sbjct: 144 RLSHGVLTGDLYLSFSGDPTLTTDDLRAMLKSLKDAGIHTVKGNLLLVGQA-KEQTRAPG 202 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 W W+D+ C++AP ++ IV++NC L + + Y P+ + + Sbjct: 203 WVWDDLGICYAAPVSSFIVNQNCVKGQLKP-KLASSASQLNFPRYLPIKV--STTAVFDK 259 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 + + +CEL++ N + ++GC P +PL LA AV D A YA +L LK A I Sbjct: 260 TQQEPFCELNLARLPDNHYHISGCYP-GDKPLNLAIAVDDPALYAKEMLTRMLKSAHIKM 318 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 SG + + + + +S L LL+ ML SDN+IAD++F+ +G + V + Sbjct: 319 SGQVAIAHRTPIGLKPLVTHKSEGLEALLRTMLLDSDNLIADSLFKAVGAHYYKVAENFH 378 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 AG+ AV+ IL G+D+ ++ I DGSGLSR+NLI+ + +VL +A+ + I +L Sbjct: 379 AGARAVKAILEAD-GIDLSHSQIIDGSGLSRYNLISARQLAEVLGLMAKDEKLRPLIELL 437 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 P+AG G+L Y+ G HQA + KVSAKTGS+QGV NLAG+++ + ++ FV +G + Sbjct: 438 PVAGVSGTLNYKRGFHQAPLMNKVSAKTGSMQGVDNLAGYLSLDASHQILFVVMENGQSQ 497 Query: 451 EPADQRNRRIPLVRFESRLYKDIYQNN 477 + ++ P F + + + N Sbjct: 498 K--SKKQSPAP---FSALFLQSLLDNQ 519 >UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=45 Tax=Vibrionaceae RepID=A5F933_VIBC3 Length = 487 Score = 403 bits (1037), Expect = e-111, Method: Composition-based stats. Identities = 169/484 (34%), Positives = 275/484 (56%), Gaps = 17/484 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQA-----ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQ 55 M F + L S F + + + T+LP GA +L+++ V ++ ++ Sbjct: 7 MLFRFIPVWLLSISGFLIASPIYAQTPLTAATTKLPQGARYSLLIEDVALQQNTLELNTH 66 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 PASTQK++TALAA ++LG FRF T L G D + RF DPTL D Sbjct: 67 LYYPPASTQKILTALAAKLELGDKFRFHTDLMRSGQ--------DWIIRFSGDPTLTTAD 118 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + ++ +K +I+G++ +D S+F+ +++A GWPW+ + C+SAP +A +D NC Sbjct: 119 LTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAPASAINLDANCIQ 178 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 S+Y+ P+ + V +YPV + SQ ++ + E+ C+L++ N +TL GCL Sbjct: 179 ASIYTEPQG--KTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATPENHYTLDGCL 236 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 R +PLPL FAVQD Y ++ L Q I G + + +AS S PL Sbjct: 237 ALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGKANTKQAQKIASHHSQPL 296 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 LLK ML++SDN+IADT+ + +GH ++ PG++ G+ A++QI + G+ + +T +AD Sbjct: 297 PVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFYSRTGISLEDTQLAD 356 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+N + P M++ L+Y+ QH+ EL I+MLP AG G+LQYR + + G++ Sbjct: 357 GSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRAPQISGQIK 416 Query: 416 AKTGSLQGVYNLAGFITTASGQRMA-FVQYLSGYAVEPADQRNRRI-PLVRFESRLYKDI 473 AK+GSL G YN+AGF+ + + FVQ+++ Y ++ P+++FE++LY+++ Sbjct: 417 AKSGSLYGTYNMAGFVMDENQRPKTLFVQFVTDYFPPRSNPEVAVEPPIIQFETQLYQEL 476 Query: 474 YQNN 477 Q N Sbjct: 477 IQFN 480 >UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Vibrio fischeri RepID=B5FA68_VIBFM Length = 468 Score = 403 bits (1035), Expect = e-111, Method: Composition-based stats. Identities = 158/478 (33%), Positives = 263/478 (55%), Gaps = 19/478 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M F R+ + S I+FS A++ E ++ LP+G+ A+ V+ + ++ ++ P Sbjct: 1 MFFFRYSLIALSLISFS-SIADIKETLSSLPSGSRAAITVENLQSNKIEFQQKQDELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST K++TAL A + LG +F FTTTL D+V F DP+L R+ + + Sbjct: 60 ASTLKIVTALVARLALGTEFTFTTTLYKADK--------DVVLTFSGDPSLSRKQLSEL- 110 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 S + I G++ ID SIF +++A GWPW+ + C+SAP +A +D NC S+ + Sbjct: 111 --FNDSELKTIQGDLWIDGSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASITT 168 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F+ + + P++ S +++ R ++ +C+L++ N + L GCL +R++ Sbjct: 169 HEDGSTRVFVPI--HQPISFSSYAKSVSREEQKSTFCDLELTTQG-NHYELNGCLVKRNK 225 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--PGTVVASKQSAPLHDL 298 PLPL FAVQD + + L + I +G + E V+A S PL +L Sbjct: 226 PLPLKFAVQDTRDFTKRTVSKILAEHNIKLNGEIRFGAPKTELTNLNVLAKHNSKPLMEL 285 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLKKSDN AD + +M+GH + PG++ G+ A++ IL +QA +D+ N ++ DGSG Sbjct: 286 LDHMLKKSDNHYADNLTKMLGHLNYQQPGSFTNGTAAIKDILLKQADIDLSNAVLVDGSG 345 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+N + M +LQ+I +++ EL I +LP +G DG+L+YR+ + + + G + +K+ Sbjct: 346 LSRNNRMTANQMKSILQFIHKYNKELGLIELLPTSGIDGTLKYRSSMRKEPIKGSMKSKS 405 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 GSL G YN+AGF+ + + FVQ+++ Y P + +P+ R K YQ Sbjct: 406 GSLFGSYNMAGFVGLENKEPQLFVQFVADY--HPVAAKEGAVPVERPIDTFEKSFYQE 461 >UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=6 Tax=cellular organisms RepID=A5IAY8_LEGPC Length = 597 Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 130/445 (29%), Positives = 231/445 (51%), Gaps = 12/445 (2%) Query: 15 AFSVQAAN----VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + S AA+ VD+ I +L NL ++V + + ++ ++ +PAS K+ + Sbjct: 15 SLSSHAASMQFEVDKLINRLNPHVNLGIVVTDLTSGETLYKRNANRLYIPASNMKLFSEA 74 Query: 71 AALIQLGPDFRFTTTLETKGN-VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AAL+ LGPD++F L T N ++ GVL G+L DP+ R+D++ ++++LK + Sbjct: 75 AALMALGPDYQFKNQLSTSANQLQQGVLHGNLYLHLSGDPSFSREDLKTLLSSLKDWNIT 134 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 I GNV+ID+S+ + PGW +D++ + AP A +VD N ++++ K G A Sbjct: 135 TIQGNVIIDSSLMSIPAYPPGWLTSDLSYSYGAPIAPLMVDSNRLTITVNPGAKAGAPAI 194 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + V + T A + C + N T+ GC+ + A++ Sbjct: 195 VEVDDGGGTINLNNQAT---TKASEKGCGVGFYLDPENNLTVRGCVGLGQWAVQQRIAIK 251 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + YA ++ EL ++ I +G +L + ++A++ S P+ L+ LK SDN+ Sbjct: 252 NPFVYAQGMIVSELAKSNIKLNGQVL-LGRAPAGTLLIATRYSKPISQLMADTLKPSDNL 310 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 AD+++ P W+ ++ L+QQ G+D+ ++ DGSGLSR+NL+ PA Sbjct: 311 YADSLYLHAAAKIKGSPVDWKQAQPVIKNFLQQQTGIDLKDSNFTDGSGLSRYNLVTPAQ 370 Query: 370 MMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 M +L+++ Q +I+ LP++G DG+LQ R G V AKTG++ G+ +L+ Sbjct: 371 TMALLKFLYQRFPLSYEYIAALPISGRDGTLQKR--FKTPNQQGFVRAKTGTMTGMNSLS 428 Query: 429 GFITTASGQRMAFVQYLSGYAVEPA 453 G++ TA+G +AF Y++ +PA Sbjct: 429 GYLYTANGHTLAFAMYINRLPGKPA 453 >UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB78_TOLAT Length = 484 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 191/483 (39%), Positives = 285/483 (59%), Gaps = 16/483 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 S F I L+ S QAA +P G+ +AL ++ G+ + YH +P Sbjct: 4 FISSAFAIFLSVLTVCSAQAAI------SVPEGSRIALAFKEPGSDS-VAAYHGDTFMIP 56 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLET-KGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 ASTQK++TALAA + GPD++F T + KG ++NGVL GDLV F P L RQ + N+ Sbjct: 57 ASTQKLLTALAASLYFGPDWQFKTRMLAPKGAIQNGVLNGDLVLEFDGAPDLTRQALVNL 116 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 +A LK+ V QI+G++L+D S + +D GW WND+ CF+AP +A ++DRNC L Sbjct: 117 LAYLKQQKVTQINGDILLDVSGYGGYDHGDGWSWNDLPICFTAPASAVVIDRNCVFAQLK 176 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 A + G +A + + P+T+ S+ R + + C+L V N + LTGC+PQ+S Sbjct: 177 -ANQLGAIAEPIIPAGQPITITSEARVVTQ-QEYYSGCDLRVDMNSSNNYHLTGCIPQQS 234 Query: 240 E-PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 P PL+FA+ D ++ ++ ++A I +G + + + +A SAPL L Sbjct: 235 GKPWPLSFAITDPTAWGVELVSWAARRADINLTGQVKAVRHIPDNLVELAHVPSAPLKKL 294 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLK+SDN+IAD++ R +GH ++ AG+DAVR IL+ +AG+D+G+ ++ADGSG Sbjct: 295 LDRMLKRSDNLIADSLSRALGHYYLKRAASYAAGADAVRGILKNKAGIDLGSALLADGSG 354 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LS HNLI M++VL Y+A HD+EL I +LP+AG G+L R + + V+AKT Sbjct: 355 LSAHNLITAKQMLEVLDYMALHDDELKLIGLLPVAGMSGTLGSRGSVQNPPLVKNVTAKT 414 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ---RNRRI--PLVRFESRLYKDI 473 G+LQ V NLAGFITTASG+R AFV +G P+ + + RI P +FE ++ + I Sbjct: 415 GTLQNVSNLAGFITTASGKRKAFVLMANGLTFPPSVRQALKAHRIASPHYKFERQILEQI 474 Query: 474 YQN 476 Y+ Sbjct: 475 YRE 477 >UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3H6_9CYAN Length = 515 Score = 400 bits (1028), Expect = e-110, Method: Composition-based stats. Identities = 111/460 (24%), Positives = 206/460 (44%), Gaps = 14/460 (3%) Query: 14 IAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + A++D + A +++Q + + P + +PAS K+ T AA Sbjct: 63 ICPADLKASIDAIANRPEFDYARWGILIQPLFSDTPLYSRERDRYFIPASNLKLFTTAAA 122 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L QLG +FR T++ G G + L DP+L ++++ L++ G+ ++D Sbjct: 123 LSQLGANFRIRTSVY--GTPTEGTIP-QLRVVGRGDPSLNTDQLKDLAQQLRRQGIRRVD 179 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PKPGDMAFI 190 ++ D F+ P W W+D+ + + I++ N ++L +P + + Sbjct: 180 QLIVEDR-YFSEPKVNPTWEWSDIQFYYGTAVNSLILNENAVLLTLTPQTVGQPLTVTWA 238 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +Q T E+ + + G L + A A+ D Sbjct: 239 DPIAAKQWQIENQTVTTEAEPTESINISGVL---GKPLLRIRGQLAADAGLWLTAVAIPD 295 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 A+Y + L +GI L+ + T +A+ S PL +L+ ++S+N+ Sbjct: 296 PANYFLQHFRRALADSGIQVERGLVTTEPNFQEDTELAAVDSPPLSELIAETNQQSNNLY 355 Query: 311 ADTVFRMIGHA-RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ + R +G + T AG + +R L + GV+ + ++ADGSGLSRHNL++P Sbjct: 356 AEALLRSLGVTDKEADESTATAGREQIRASLAE-LGVEPESYVLADGSGLSRHNLVSPTA 414 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 ++Q LQ IA+ +++ L +AG +G+L+ R G+V AKTG++ GV L+G Sbjct: 415 IVQTLQAIARTPMAQSYLDSLAVAGVEGTLRQR--FQNTPAQGRVYAKTGTMTGVSALSG 472 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 ++ Q + F ++ + R +V SRL Sbjct: 473 YVEVPDYQPLVFSIMVNQSNQSVSTIRQAIDEIVVLLSRL 512 >UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibrionales RepID=B7VJI8_VIBSL Length = 477 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 155/455 (34%), Positives = 265/455 (58%), Gaps = 13/455 (2%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 + +LP G++ +L+++ + + ++ +S PAST K++TALAA ++LG +F +TT+ Sbjct: 26 PLDKLPDGSSTSLILKSLSDDSSELNTNSDGFYPPASTLKLVTALAAKLELGDNFNYTTS 85 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 + D+V F DPTL+R+ ++N++ KS I GN+ +D S F + Sbjct: 86 IARSNK--------DVVIAFSGDPTLQREHLKNLLDQYAKSQSKTIKGNLYLDNSAFTGY 137 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 +A GWPW+ + C+SAP +A +D NC S+Y+ K + + ++YP+ + + Sbjct: 138 QRAVGWPWDILGVCYSAPSSAMTLDSNCAQASIYT--KDNGTTRVYIPAHYPIDVTTTAT 195 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T+ R +A C+L+++ N + L+GCL +R +PLPL FA+Q Y ++ LK+ Sbjct: 196 TVTRSGQKATQCDLELITTPDNTYKLSGCLVERKKPLPLKFAIQSPELYTVQVVTSILKE 255 Query: 266 AGITWSGTLLRQTQVNEPG-TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 I G ++ + T++AS S L +L+ IMLKKSDN+IAD + + +G + Sbjct: 256 LRIEVKGNVVVGKKAKSGKSTLIASHSSEKLPELINIMLKKSDNLIADNLTKTLGATFYV 315 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 PG++ G++A++QIL +A +D+ + DGSGLSR+N + TM QVL+YI ++D +L Sbjct: 316 QPGSFNNGTEAIKQILLTKANIDLSQAQLVDGSGLSRNNRMTSQTMAQVLRYIWENDKQL 375 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQ 443 N I +P +G DG+L+YR + +A + G + AK+GSL G YN+AGF +G+ FVQ Sbjct: 376 NLIEAMPTSGTDGTLKYRQSMRKAPIQGNIIAKSGSLYGSYNMAGFGLDKAGKPNSLFVQ 435 Query: 444 YLSGYAVE-PADQRNRRIPLVRFESRLYKDIYQNN 477 ++ Y + P ++ P+ +FE Y D+ + + Sbjct: 436 FVRDYFPDTPDPEKPVEAPITQFERAFYTDVVEFS 470 >UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Moritella sp. PE36 RepID=A6F7V3_9GAMM Length = 464 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 165/469 (35%), Positives = 269/469 (57%), Gaps = 14/469 (2%) Query: 16 FSVQAANVDEYITQLPAGANLALMV-QKVGASA-----PAIDYHSQQMALPASTQKVITA 69 + A+ + LP+G N+A ++ Q A+ ++++ + PASTQK++TA Sbjct: 1 MNTHASEIAPLEKLLPSGTNVAYIIGQPFTATEKVSHNAISQHNAELLLTPASTQKLLTA 60 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 L A + L ++ F T+L G++ + ++ F DPT R D+R+M+ LK SG+ Sbjct: 61 LTAKLYLTDEYIFNTSLH--GSISKQSIS-EMEFNFTGDPTFSRDDLRDMLKRLKASGIT 117 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 +I G++ ++ S F ++ G WND C++ +A +++ NC +L + A Sbjct: 118 KISGDITLNQSRFNGYNWGNGQVWNDQAVCYATQASALVINNNCVLGNLRRSADL-KKAT 176 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 I + Y P+ + SQV + + +AQ+C+L+V+ N +TL GC+ LPL+FA+ Sbjct: 177 IYIPEYEPIILTSQVDIISKEQQQAQFCDLEVIRHPNNNYTLFGCITPSKRNLPLSFAIS 236 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 D SY A+L EL QA I ++G ++ + V+ + QS PL D++ M+K+SDN+ Sbjct: 237 DPVSYFTALLNAELAQANIEFTGNVVESFKTVNTA-VIVNHQSPPLADIITEMMKESDNL 295 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 IAD +F+ IG F PG +R G+ A+R+IL + G+ + + +IADGSGLSRHNL++ T Sbjct: 296 IADILFKTIGAEYFQQPGNYRNGAKAMREILADE-GLSLASNVIADGSGLSRHNLVSAQT 354 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M VL+YI HD+EL + +P++G DG+LQYR GL + GKV AKTGSL+G+ NL G Sbjct: 355 MFNVLEYIISHDDELQLLKTMPISGVDGTLQYRRGLLTKKLTGKVVAKTGSLKGLSNLVG 414 Query: 430 FITTASGQRMAFVQYLSGYAVEP--ADQRNRRIPLVRFESRLYKDIYQN 476 + T + FV +SGY +P AD+ + PL ++ + + I + Sbjct: 415 IVKTEKNHMVPFVLMVSGYNPQPRDADKPKQPSPLTQYSAAFFNTIVSH 463 >UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6END1_ALISL Length = 469 Score = 397 bits (1021), Expect = e-109, Method: Composition-based stats. Identities = 161/479 (33%), Positives = 261/479 (54%), Gaps = 18/479 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M SR I S +FS A++ I LP+G+ A++V+ + + ++ P Sbjct: 1 MPLSRLFILSLSLYSFST-FASIPSSIQLLPSGSRAAIVVESLHDQSIEFQQKENELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST KV TALA+ + LG +F+F TTL + F DP+L R+++ ++ Sbjct: 60 ASTLKVATALASRLALGKNFQFKTTLHK-------TKHNSVQLTFSGDPSLTRENLSSL- 111 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 K SG+ I G++ +D SIF +++A GWPW+ + C+SAP +A +D NC S+ + Sbjct: 112 --FKNSGLKNIKGDLWVDDSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASIST 169 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F+ + + P++ + RT+ + +C+L++ N + L+GCL RS+ Sbjct: 170 NENGTTRVFVPI--HQPISFTTAARTVSAKEKKNSFCDLELTTQG-NNYHLSGCLVARSK 226 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL--RQTQVNEPGTVVASKQSAPLHDL 298 PLPL FAVQ+ + L L + I SG ++ T + ++AS QS PL L Sbjct: 227 PLPLKFAVQNTTEFTEQTLLRILNEQNINLSGKIIFGNSTGKIQKTVLLASHQSEPLMVL 286 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLKKSDN AD + + +GH + PG++ G+ AV+ IL +QA VD+ N +I DGSG Sbjct: 287 LNHMLKKSDNHYADNLVKTLGHYHYQQPGSFSNGTAAVKDILLKQANVDLTNAVIVDGSG 346 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+N + M +LQ++ ++D EL I++LP +G DG+L YR + + + G + +K+ Sbjct: 347 LSRNNRMTANQMKSLLQFVYRYDKELGLIALLPTSGIDGTLIYRNSMRKEPIKGSIKSKS 406 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI--PLVRFESRLYKDIYQ 475 GSL G YN+AGF+ FVQ+++ Y A++ + P+ FE Y+ + + Sbjct: 407 GSLFGSYNMAGFVGLEGNNPQLFVQFVADYHPIAAEEGVLPVERPIDSFEKAFYQALIK 465 >UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=2 Tax=Legionella RepID=C6N6B5_9GAMM Length = 611 Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats. Identities = 126/445 (28%), Positives = 225/445 (50%), Gaps = 8/445 (1%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAST 63 + L S + VD+ I ++ NL ++V + + ++Q++ +PAS Sbjct: 22 GFCLWALWSGSQCASVQGEVDKLIQRVNPQVNLGMVVVDLNSGETLYRRNAQKLFIPASN 81 Query: 64 QKVITALAALIQLGPDFRFTTTL-ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT 122 K+ + AAL+ LGPD+ F L + G V+ GVL+G++ + DP+ R+D++ ++++ Sbjct: 82 MKLFSEAAALMVLGPDYHFKNQLSLSSGKVQQGVLQGNVYVQLSGDPSFSREDLKKLLSS 141 Query: 123 LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 LK +N I GNV ID+S+ PGW +D++ + AP A +VD N +V++ Sbjct: 142 LKDWNINTIQGNVYIDSSLAQVDAYPPGWLTSDLSYSYGAPTAPVMVDANRLTVTVNPGA 201 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 GD+A + V + T A A+ C + N T GC+ + Sbjct: 202 HTGDLAVVEVDDGGGAISINNQVT---TKASAKGCGVGFSLDKDNHLTARGCVGVDQWAV 258 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 A+++ +YA ++K+ L A I +G + + ++A++ S L +L+ Sbjct: 259 QQRMAIKNPLAYAQGMIKNNLASANIQLNGEV-QLGTAPAGSILIATQYSKALSELMADT 317 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 LK SDN+ AD+++ P W+ ++ L+ Q G+D N + DGSGLSR+ Sbjct: 318 LKPSDNLYADSLYLHAAAKLNGSPVNWKGAEPLIKNFLQAQTGIDFKNAVFTDGSGLSRY 377 Query: 363 NLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +L+ P + +L ++ Q +IS LP++G DG+LQ R G V AKTG++ Sbjct: 378 SLVTPEQTISLLTFLHQRFPLSYEYISALPVSGRDGTLQKR--FRVPTQQGFVRAKTGTM 435 Query: 422 QGVYNLAGFITTASGQRMAFVQYLS 446 G+ +L+G++ T++G +AF Y++ Sbjct: 436 TGINSLSGYLYTSNGHTLAFAMYIN 460 >UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rickettsiella grylli RepID=A8PP32_9COXI Length = 497 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 135/442 (30%), Positives = 228/442 (51%), Gaps = 10/442 (2%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 N+++ ++ G N + +Q + Y++ + +PAST K+ T +AAL LGP F+ Sbjct: 49 NINQILSHF-KGFNTGISIQSLSTGKIIYQYNANRRFIPASTLKLFTGIAALEYLGPHFQ 107 Query: 82 FTTTLETKGN--VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 F T T V +G L G+L +F DP L D+++M+ TL + +N++ GN++ID Sbjct: 108 FKTRFLTNSGSIVRHGTLMGNLYIKFSGDPYLTLNDLKDMLETLNEQHINKVQGNIIIDD 167 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 ++ PG +D C++AP A I++RNCF++S+ + + + + Sbjct: 168 TVIDRSTWPPGRVIDDRIFCYAAPVTATIINRNCFNLSIKPTQNLLHPTVTKSSRHLGIV 227 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + +Q T R +L N +TLTG L ++ PL A A+Q+ I+ Sbjct: 228 IDNQAVT-KRLKQARYSLDLKPNAVSKNHYTLTGYLSRKMGPLSFAVALQNPNLATYDIV 286 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 LK+ I +S + + +A S L L+K MLKKSDN+IAD++ + +G Sbjct: 287 AGLLKKYSIRYSSLIF--GKTPPFAKTLAENSSPELAFLIKNMLKKSDNLIADSLLKKLG 344 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 F+V G+W++G +AV+ IL + ++ ++ DGSGLSR N I P +++L + Sbjct: 345 EKYFSVQGSWKSGRNAVQAILANKTNINFKQLVMVDGSGLSRANSITPNAFVKLLNFAYT 404 Query: 380 H-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + F LP +G DG+L++R G GK+ AKTGS+ G+ +LAG+I TA+ Sbjct: 405 QLPDSDLFFESLPRSGIDGTLKHRLG---GASLGKIHAKTGSMHGISSLAGYIQTANHHI 461 Query: 439 MAFVQYLSGYAVEPADQRNRRI 460 +AF ++ +Q R+ Sbjct: 462 LAFSILINDPVPGKNNQGGYRL 483 >UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q2Y6_9ACTO Length = 528 Score = 391 bits (1004), Expect = e-107, Method: Composition-based stats. Identities = 116/438 (26%), Positives = 188/438 (42%), Gaps = 19/438 (4%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G+ + L+V+ D + LPAS K+ ++ AA+ LG D+RF T + V Sbjct: 60 GSQVGLLVRDATTGETLYDRNGGTRLLPASNTKLFSSAAAMETLGADYRFHTDVLATAPV 119 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 +G L+GDL + DPT D + + +SGV +IDG+++ D + F W Sbjct: 120 RDGKLRGDLYLKGYGDPTSLESDYVALAKQVAQSGVRRIDGDLVADDTYFDHVRLGDSWA 179 Query: 153 WNDMTQCFSAPPAAAIVDRN------CFSVSLYSAPKPGDMAFIRVASYYPV-TMFSQVR 205 W+D ++A +A + N V G +++ V + S Sbjct: 180 WDDEPFYYAAQISALTLAPNADYDSGTAIVESRPGSTVGAPVDLKLVPATSVLKLVSTAT 239 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T GSA E D N +TG +P S V + YA + + L Sbjct: 240 TGAAGSANTLSIERD---HGTNIVRVTGSVPAGSSVGTEWVTVWEPQVYAADVFRRALAA 296 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 G+ G + +A +S + L+ +K S+NM A+T+ + +G A Sbjct: 297 QGVRVDGRIKVAATPAAGTRRLARDESMTVGQLMNPFMKLSNNMHAETLVKAMG-AVAAA 355 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 G+W AG V Q + GVD G ++DGSGLSR + P ++ +L + + Sbjct: 356 NGSWPAGLGVVTQYAKS-VGVDTGTIRLSDGSGLSRKVNVTPKSVTDLLVAVQKEPWFQQ 414 Query: 386 FISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LP+AG G+L+ R + V AKTGSL GV L+G+++T G+++ Sbjct: 415 WYDALPIAGNPDRFTGGTLRNR--MAGTPAANNVHAKTGSLTGVTALSGYVSTKDGRKLV 472 Query: 441 FVQYLSGYAVEPADQRNR 458 F + Y V P + Sbjct: 473 FSMISNNYLVSPRAVEDA 490 >UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Shewanella RepID=B0TT55_SHEHH Length = 476 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 169/485 (34%), Positives = 263/485 (54%), Gaps = 26/485 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGAS------APAID 51 RF+ T C+ +A D+Y+ + P + A++V + + +PA Sbjct: 2 LKRFVAATTLCLI--ATSAVADDYLANMVKAIEPKTSQTAIVVSPLNLNDEGHVSSPAYR 59 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 +Q++ +PAST K++TA+AA LG DFRF T +++ ++N ++GDL RF DPTL Sbjct: 60 KDAQRLFVPASTMKLLTAVAATTALGKDFRFKTQIDSFVGIKNRRIEGDLFIRFDGDPTL 119 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 +D+R + LKK G++ IDGN+ + +APGW W+D+ C++AP + IV++ Sbjct: 120 TGRDLRQLFKQLKKHGLDHIDGNLYL-IGDQQETLQAPGWVWDDLGICYAAPVSRYIVNQ 178 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 NC L + + + PV++ S G + +CEL + N F L Sbjct: 179 NCVKAKLSPTLADNQG-KLTFSQFEPVSIASTAVFDKVG--DTPFCELSLQRQANNEFIL 235 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 +GC +PL LA A+ D A YA + + L GI G +L ++ ++A Q Sbjct: 236 SGC-HAGQKPLNLAIAISDPALYAQKTVANTLTSIGINIKGDVLLTSKRPANTILLAEHQ 294 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S PL +L IML KSDN+IAD++ + +G + VPGT+ GS A++QIL +Q GVD+ + Sbjct: 295 SKPLSELTDIMLLKSDNLIADSLLKRLGQYIYGVPGTFINGSAAMKQILTEQ-GVDLSSA 353 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 I DGSGLSR+NL++ ++QVL + Q + I LP+AG G+L+YR G + + Sbjct: 354 NIVDGSGLSRYNLLSADQLIQVLLLLKQKEQLNFLIDQLPIAGKSGTLKYRNGYTASPLK 413 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 G V AKTGS+ GV NLAGFI GQ AFV +G++ P+ +++ P F Sbjct: 414 GSVLAKTGSMMGVTNLAGFIK-KDGQLSQAFVILENGHS--PSVKKSELAP---FNVLFL 467 Query: 471 KDIYQ 475 + + Q Sbjct: 468 QSMVQ 472 >UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Sulfurihydrogenibium RepID=B2V8H3_SULSY Length = 475 Score = 386 bits (992), Expect = e-106, Method: Composition-based stats. Identities = 139/453 (30%), Positives = 232/453 (51%), Gaps = 21/453 (4%) Query: 1 MRFSRFIIGL---TSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQ 55 MR+ F++ L S + + + I + A + + ++ + Y+ + Sbjct: 1 MRYIIFLLLLIFSFSAYSSEILKYQFESIIRDINNENDAKVGIFIKSLSEDDFTYMYNYR 60 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 +PAS QK+IT ++A+ L PDF++ TTL T GNV+NG L G+L G DP+L QD Sbjct: 61 NPFIPASNQKLITTISAIANLSPDFKYRTTLATNGNVKNGTLYGNLYLIGGGDPSLTVQD 120 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + NMV LK+ G+N+++GN++ D S F+ GWP +D+ CF+A + V+ NC Sbjct: 121 LENMVKKLKEYGINRVEGNLIGDNSYFSEEGTGQGWPEDDLNYCFTARFSGLSVNENCLR 180 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 +S+ K G + S P+ + Q+ S +A L V + NR L G + Sbjct: 181 ISVNI--KNGKVY----VSMNPLNNYYQIVNNIEFSKKAGNVILRV---EGNRLILEGKV 231 Query: 236 -PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 +RS L + V + + ++L L + GI SG + + V+ QS P Sbjct: 232 SSKRSLNLEFSIPVNHPSIFTLSVLSKILDENGIKVSGKMYLGKAASYKYFVI--HQSKP 289 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L +L+K K S+N A+ +FR IG + V G+ A + A+ LR + V N I Sbjct: 290 LRELIKKANKDSNNFYAEQIFRTIGKEVYGV-GSTYASARAIIDTLR-KMHVATENIRIY 347 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLS++N P +++VL YI + +F L ++G DG+L++R L+ + G++ Sbjct: 348 DGSGLSKYNYTTPEALVKVLDYIYKTPYFYDFFESLAISGVDGTLKHR--LNDQSLKGRI 405 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 AKTG ++ V NL+G++ ++G+ F ++ Sbjct: 406 IAKTGYIKKVKNLSGYVKASNGEVFVFSILVND 438 >UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJV1_RHOM4 Length = 497 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 129/502 (25%), Positives = 212/502 (42%), Gaps = 40/502 (7%) Query: 1 MRFSRFIIGLTSCIAFS-VQA-------ANVDEYITQLP-AGANLALMVQKVGASAPAID 51 MR + I L + V A A +D + A +V + S Sbjct: 1 MRLRIWPILLLLWTVPAPVHAQSPRTLQATLDRVLDDPAYESAFWGALVLDLRDSTVLYA 60 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 H++Q PAS K+ AAL QLGPDFR+ T L G V +GVL+G+L+ R DP + Sbjct: 61 RHARQNFTPASVTKLFITAAALEQLGPDFRYVTRLLADGPVVDGVLQGNLIVRGAGDPAI 120 Query: 112 K--------RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 R +L++ G+++I G+++ D + F GW W+D+T ++A Sbjct: 121 GGRFTDGDRTATFRAWADSLRRRGIHRIAGDLIGDDNYFDDTPLGTGWSWDDLTYWYAAE 180 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 +A + NC V++ + VT+ +Q T+P G + Sbjct: 181 ISALSFNDNCVDVTIEARRPGEPGRLTWEPPTTYVTLINQTYTIPAGQQLKEGYRRLP-- 238 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-------R 276 N L +P+ + V + Y +L++ L GI G + + Sbjct: 239 -GTNTIVLFSRVPEGRRD-TESLTVHNPTRYFVHVLREVLLAEGIAVEGQPVDVDEFSIK 296 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR-----FNVPGTWRA 331 VA+ S PL ++++++ ++S N+ A+ + R +G R PG+ Sbjct: 297 PDYTAPNLWTVATYTSPPLSEIVRVINRRSQNLYAEMLLRTLGAERPVPDSTLTPGSAEM 356 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN---ELNFIS 388 G A + +AG+D DGSGLS NL++P +++L Y+A H + F + Sbjct: 357 GLAAAARTWL-RAGIDTSRIQFVDGSGLSAQNLVSPEATVRLLAYMAAHPDRAVWRAFYA 415 Query: 389 MLPLAGYDG-SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LP G + +LQ R G V AKTG++ LAG++ TA G+ +AF + + Sbjct: 416 SLPTGGEEATTLQNR--FRAGRARGNVRAKTGTISNTSALAGYVRTADGRLLAFAIFCNH 473 Query: 448 YAVEPADQRNRRIPLVRFESRL 469 Y V R V +R Sbjct: 474 YTVPTRQVRRTIDAFVEHLARY 495 >UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2C7_9PROT Length = 494 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 110/479 (22%), Positives = 205/479 (42%), Gaps = 39/479 (8%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQM 57 R L C+A +V AA++ + Q A++ A+ V++VG AP I ++Q+ Sbjct: 1 MKRPYAALLLCLAVNVHAASLPATVVQELKNAHIPRSGIAVEVREVGKHAPLISINAQRP 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAST K++T ++L LGP + + T G +++GVL G+L+ + DP + Sbjct: 61 MNPASTMKLLTTYSSLDLLGPAYTWKTEAWIDGELKDGVLDGNLILKGYGDPKFTIEQFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++ L+ G+ +I G++++D S F PG D + ++ P A +++ N + Sbjct: 121 LWLSELRARGLREIRGDLILDRSYFDLPPYDPGAFDADPVRAYNVGPDALLLNFNTLRLR 180 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + + +T+ +Q+ + +L V + L G P Sbjct: 181 YMPDGIGLKV--VTEPPLDGMTLHNQLTPNNEKVNCDNWDDLFQVQPQGDSVVLQGDYPM 238 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 +V Y GA+ K+ G T G R V + ++ +S PL Sbjct: 239 GCGEREQNLSVMPHTRYVGAVFSAVWKELGGTLQGKE-RDGVVGTGAKLFSTHRSEPLSS 297 Query: 298 LLKIMLKKSDNMIADTVFRMIGHA----------RFNVPGTWRAGSDA------------ 335 +++ + K S+N++A +F +G N P + A + A Sbjct: 298 IIRDINKYSNNVMARQLFLTLGETVPVAKDNEPPTENEPASGVAATQASFPENEEWTGRM 357 Query: 336 -------VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 Q+ + + ++ +G+GLSR+ I+ A+M ++LQ + Sbjct: 358 SIERSVLAMQLWLARNHLHFPELVLENGAGLSRNERISVASMDKLLQLAYDDPLSAELQA 417 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LP+ G DGS++ R L + KTG+L+GV +AG++ + SG+ V Y++ Sbjct: 418 SLPILGVDGSVRRR--LKDSPAASHAHLKTGTLEGVKTIAGYVRSKSGREWIVVFYINH 474 >UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CP00_SHEPW Length = 463 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 156/448 (34%), Positives = 237/448 (52%), Gaps = 7/448 (1%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R I+ + FS A D + LP + L + ++ +D +S +M +PAST Sbjct: 4 RKILASAILLTFSSNVAANDIKLI-LPDTSALTAIKYSNHQNSTKLDQNSDKMFIPASTM 62 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA+AA LG F++ T + K +ENG + GD+ F DPTL DI ++ A L+ Sbjct: 63 KLLTAIAATASLGDQFKYQTKVLAKTPIENGKIDGDVYILFSGDPTLTSLDIESLFAQLQ 122 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + G+ I GN+ + + APG W+D+ C+SAP ++ I++ NCF Sbjct: 123 QQGLALITGNIYLVGEEY-ELQHAPGRVWDDLGICYSAPVSSFIINENCFKAEFVPRLAD 181 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 D +++ PV++ S+ + S + C+L + + N F L GC P S+PL L Sbjct: 182 -DAGEVKIVGSEPVSIESRA--VFDKSLQQPICDLTLARLENNHFRLDGCYP-GSKPLKL 237 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 A+ D A +A L +K I G +L +Q VA QS PL DL+ ML Sbjct: 238 NIAITDPARFAKDKLTQIVKNTKIVLRGQVLIASQFPAYSLSVAEHQSEPLTDLIATMLL 297 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 KSDN+IAD++ + +G + PGT+ +GS A++ IL QQ G+D+ N I DGSGLSR+NL Sbjct: 298 KSDNLIADSLLKRLGQQVYGAPGTFASGSAAMKLILTQQ-GIDLSNAHIVDGSGLSRYNL 356 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 ++ + + L + + N I+ LP+AG G+L+YR G + GKV AKTGS+ GV Sbjct: 357 LSANQIAEGLALVRDNPAYTNIINSLPVAGESGTLKYRKGYANVSLKGKVLAKTGSMLGV 416 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEP 452 N+AGFI FV +G + E Sbjct: 417 SNMAGFIKNGDKITATFVVLQNGVSPEK 444 >UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7Z9_ALHEH Length = 480 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 113/461 (24%), Positives = 194/461 (42%), Gaps = 16/461 (3%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 GL +A +V VD +++ VQ+VG P + + PAS K++ Sbjct: 27 AGLPDALAQAVDRLGVDR--------EQVSIWVQRVGEPEPLLAHQVDTARNPASVLKLV 78 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 T+ AAL LGPD+R+ T L G V +GVL+GDL+ R G DP L ++ + L++ G Sbjct: 79 TSFAALEGLGPDYRWRTELYALGPVRDGVLEGDLLIRGGGDPFLVTEEFWKLTGALRRQG 138 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 V +I G+++ D S F + + PG + ++ PP +V+ N S + G Sbjct: 139 VREITGDLVYDLSYFNLYPEDPGAFDGRPHRAYNQPPHPLLVNFNAISFEIKPT-TGGAP 197 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQ----YCELDVVPGDLNRFTLTGCLPQRSEPLP 243 + +T+ +++ G Q + ++ G L L G P + Sbjct: 198 RVVADPPLPGLTLDNRLGLRQSGCGGFQRGIAFQVVEQPGGSLPGVLLEGRYPSHCDEWR 257 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 L V Y + Q G ++G V +S PL LL+++ Sbjct: 258 LVRTVLPVEDYVHQLFTLLWGQWGGIFAGGWREGRGPAPGAEPVVVHESPPLGQLLRLVN 317 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 K S+N++ + +G + P T G +V +L G+D + +G+GLSR Sbjct: 318 KYSNNVMTRHLKLTLGAEHYGAPATSEKGRRSVLDVLHAH-GIDTAGIVFDNGAGLSRDT 376 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 I + Q+L + F+S L +AG DG++ R G++ KTG L Sbjct: 377 RITARQVAQLLTVARERPWMAEFVSSLAIAGTDGTMGRR--FQDGPERGRMHLKTGHLND 434 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 V +AG++ + + V ++ R + ++R Sbjct: 435 VAAIAGYLHPPGAEPLVAVVLVNHPDAHRGAGRGIQEAVLR 475 >UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZME1_9GAMM Length = 488 Score = 384 bits (986), Expect = e-105, Method: Composition-based stats. Identities = 110/442 (24%), Positives = 204/442 (46%), Gaps = 3/442 (0%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 Q ++ L VQ+V A ++ PAST K+ T+LAAL +LGP++ +TT + Sbjct: 50 AQGLPPDSVGLWVQRVPDGAVLARLNADTPYNPASTVKLATSLAALHELGPNYTWTTEIW 109 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 V++GVL+GDLV R DP + ++ M+ L+++G+ +I+G+V++D S F + Sbjct: 110 ATRPVQDGVLRGDLVIRGTGDPGMVTEEYWRMIGELRRTGLKRIEGDVILDASHFQLPNG 169 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 PG + ++ P A V+ N + + + + + + ++++ Sbjct: 170 DPGDFNRQPLRAYNQLPYALHVNSNSQRFHVRPERRGNGIDVVVDPPLPGLEVVNRLQPT 229 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 G E Q V + R T +G P + +V + + + Q G Sbjct: 230 RGGCGEWQRGIQFNVDQNAQRVTFSGQYPVNCGNYEMLRSVLTPEANHAEMFRMAWDQWG 289 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 +G + + +S PL DL+++ K S N+++D + +G + P Sbjct: 290 GELTGRVRTGVLPVLHDEPIVRHRSRPLSDLIRVSNKWSSNVMSDHLLLTLGARKNGPPA 349 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T G +A+ LR GVD+G ++ +GSGLSR + + ++L+ +H + F Sbjct: 350 TMDKGREALVHSLRD-LGVDVGGMVVDNGSGLSRDARMTARQLGEILEAGWKHPHRPEFQ 408 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 S L L+G DG+L+ R + G++ KTG + V +AG++ T+SG + ++G Sbjct: 409 SSLALSGLDGTLRNR--FRNGDLRGQMHLKTGHINEVSAVAGYVRTSSGDDVIVTVLVNG 466 Query: 448 YAVEPADQRNRRIPLVRFESRL 469 RN + ++ + L Sbjct: 467 PRAHIGHGRNLQDAVLEWAHGL 488 >UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K701_CYAP7 Length = 475 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 115/467 (24%), Positives = 209/467 (44%), Gaps = 19/467 (4%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 G I S ++ I + + ++V+ + Q +PAS K Sbjct: 21 FPGFAQSICPSNLGQEIEAVIQRPEWRRSRWGILVETLEDGQILYGVDENQYFVPASNTK 80 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 ++T AAL LG DFR T++ G + L DP+L + ++ + LK+ Sbjct: 81 LLTTAAALRVLGADFRVRTSVYGVGEPP---ILASLRVVGRGDPSLTNKQLKLLAQQLKE 137 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PK 183 GV QI +++D S F P W W+D+ ++ + I++ N + + Sbjct: 138 KGVQQIS-ELIVDDSYFKELPLNPSWEWSDLLFYYTPSVNSLILNENTSLIKIVPQGLNY 196 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 P + + +++ V T +GS + D +TG LP E Sbjct: 197 PAKLVWSDAIVARQWRVYNDVITTRQGSRKTIDFYRDFEQP---IIYITGQLPVDDEGYT 253 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 A AV D ASY + L + GI + T+++++ + G +A +S PL +L+ + Sbjct: 254 TAIAVADPASYFLESFRSILLEEGIKVNRATIIKESSRFDLGEELAFVESPPLGNLIDKI 313 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 +S+N+ A+ + R++G N + G + +++ L G++ + +ADGSGLSR Sbjct: 314 NGESNNLFAEAILRILGSESRN-----QMGVEVIKENLID-LGIEEDSFSLADGSGLSRQ 367 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 NL+ P T++QVL+ +AQ + + + L +AG G+LQ R G + KTG+L Sbjct: 368 NLVTPETLVQVLRLMAQSPDAEIYQNSLAVAGEKGTLQRR--FLDTDFVGNLQGKTGTLT 425 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 GV L+G++ + Q + F ++ ++ R ++ S+L Sbjct: 426 GVSALSGYLFVPNYQPLVFSIMINYTDQPGSNLRKAIDEIIILMSQL 472 >UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4D8_METFK Length = 468 Score = 382 bits (982), Expect = e-104, Method: Composition-based stats. Identities = 118/454 (25%), Positives = 198/454 (43%), Gaps = 17/454 (3%) Query: 18 VQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + AA + E +++L + N+A+ VQ+V S+P +D+ S + AST K+++ A Sbjct: 17 LHAAAIPEPVSELLRKSGIPAENVAVYVQRVDQSSPLVDHQSDRPMKTASTMKLLSTYAG 76 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L LGP +R+ T + G++E+GVL G+L+ + DP L D+R M+ L+ +GV I Sbjct: 77 LELLGPGYRWRTQVYHDGSLEDGVLHGNLIIQGRGDPYLLAADMRMMLENLRLAGVEDIQ 136 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 G++++DT FA ++A P A V+ S + G +A I Sbjct: 137 GDIVLDTHYFARRFHDTAEFDGKPHAPYNAVPNAFAVNIKSTSFHFLV--ERGKLA-IEA 193 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVV---PGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 P L RG L V G+ T G P L V Sbjct: 194 DPILPEIHIHNQTNLVRGECGDWKSRLRFVVEPMGNEVAVTFKGDYPLACGSKTLELNVL 253 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + YA + + G G R + E ++ + S PL ++++ + K S+N+ Sbjct: 254 EDGPYAYGLFRSNWLSLGGKLQGG-WRYGVLPEDARLLLTHDSLPLSEIIRTINKYSNNL 312 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 + +F +G R + P G AV+ L + G+ ++ +GSGLSRH I Sbjct: 313 MVRQLFLTMGAERVSSPAMEADGVLAVKAWLASK-GLHFPELVLENGSGLSRHEQITARH 371 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M L ++S LP+ DG++ R L + G KTG++ GV LAG Sbjct: 372 MAAFLLAAYASPVMPEYLSALPIPSVDGTMANR--LRHSEARGSAHLKTGTINGVSALAG 429 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 ++ G+R V ++ + + R + L+ Sbjct: 430 YVHDRRGRRWVAVIMVND--PKASSSRAAQDALI 461 >UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT5_HALNC Length = 489 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 199/458 (43%), Gaps = 16/458 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN--------VDEYITQLPAGANLALMVQKVGASAPAIDY 52 + F +G+ S S AA ++ Q + +L + VQ V ++ P + + Sbjct: 12 FLLAAFFLGIGSANIQSATAAGAVGMPPSVLETLKKQKLSLGDLGIWVQAVDSNKPLLTH 71 Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK 112 + PAS K++T++ AL LG +F++TT + NGV+ G+L + DP + Sbjct: 72 LPDDLFNPASVMKLVTSVVALDVLGTNFQWTTRVYADALPVNGVVHGNLYIKGEGDPWFR 131 Query: 113 RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN 172 +D+ ++V L G++++ G +++D S F P + + ++A P A ++D Sbjct: 132 SEDLWDLVRQLSDLGIHEVTGKLVLDNSYFDPGPADPSDFDDHPERVYNALPQALLLDNR 191 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE--LDVVPGDLNRFT 230 V + + G A +R + L +G+ Q + + V+ D N T Sbjct: 192 ATRVLIVPPDRSGAGAVVRAWPPNSNIAINNDVKLVKGACTGQTNQPSIAVLGPDTNTPT 251 Query: 231 --LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA 288 ++G + +P + + K + G GT + V + + Sbjct: 252 LNVSGKISTECQPDQFYLVAGNANDAFYSAFKHLFEGQGGKIDGT-WAEGVVPKTAVYLV 310 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 S L L + K S+N++A +F +G PGT + L++Q G + Sbjct: 311 QHNSENLTQYLYLQNKWSNNLMARQIFLTMGAEIKGAPGTLLKSKAVIADWLKRQ-GFNW 369 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 I +GSGLSR I+P M Q+L Y + ++ LP+AG DG+++ R + Sbjct: 370 PGFDIENGSGLSRKARISPKEMGQLLMYAWRSPTMPELMASLPIAGIDGTMRKR--MRGE 427 Query: 409 GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 G + KTG+L+ V AG+I T SG+R V + Sbjct: 428 PARGMIHLKTGTLRDVRAGAGYIITQSGRRYVVVILQN 465 >UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X959_METSD Length = 480 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 120/473 (25%), Positives = 204/473 (43%), Gaps = 25/473 (5%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 L ++ ++Q A + A ++A+ Q++ P I + + PAST K++ Sbjct: 18 AVLPLPVSQALQQAGL--------ADDDVAVYAQRLDLPLPVIAHRADAALNPASTMKLL 69 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 T AAL LGP +R+ T + G + +GVL+G+L+ R DP L +D ++ L++ G Sbjct: 70 TTYAALDMLGPAYRWRTEIYRDGPLVDGVLQGNLILRGEGDPALMAEDFWRLLGRLRQLG 129 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 V I G+++ID S FA + D + ++ +A +++ S+ L + Sbjct: 130 VRDITGDLIIDNSYFAPQAQDAAAFDGDGYRAYNVTASALVINLQASSLRLAVSADSPAR 189 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELD------VVPGDLN------RFTLTGCL 235 + P + + R S L V P N TL+G Sbjct: 190 VEVSAEPALPGVVVQNRLQVTRDSCGDWRSRLQYKVQPKVEPQAANDPVRGVSITLSGTF 249 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 L +V DG Y + + + G + G + Q + + PL Sbjct: 250 SADCGEKYLELSVLDGPQYTYQLFQSLWQSLGGSLHGEVRLQALPPQAVKLTDQLSPLPL 309 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 D+L+ + K S+N++A + + + N+P T AG++AVRQ L ++ G +I + Sbjct: 310 ADVLRRLNKYSNNLMARQLLLTVAAQQGNLPATEEAGANAVRQWLVKK-GYRFPELMIEN 368 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 G+GLSR I+P + +L +S LP+ G DG+L R + V G+ Sbjct: 369 GAGLSRVERISPRHLGNILADAYAGPWMPELMSSLPVLGVDGTLLKR--MQGQPVQGRAH 426 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 KTGSL GV LAG++ GQ V + A R+ + L+ + R Sbjct: 427 LKTGSLNGVSTLAGYVLDQHGQPWLLVFMANH--PRAAATRSAQDALINWIYR 477 >UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCC2_9PROT Length = 468 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 109/453 (24%), Positives = 198/453 (43%), Gaps = 15/453 (3%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPA 61 F + L + + + V + + QL + + V ++G+S P + ++ PA Sbjct: 10 FLIKLTALATPLFANELPFVVKQKLHQLAIPETAIGIYVHEIGSSQPVLTINADSSMNPA 69 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 S K++T A L LGP + + T L G + + VL GDLV + DP L ++ +V Sbjct: 70 SVMKLLTTYAGLELLGPAYTWQTILYANGKITDDVLYGDLVIKGYGDPKLDLENFWLLVH 129 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 L+ +G+ +I GN+++D S + + PG + ++ PP A +++ + L+ Sbjct: 130 RLRLTGLREIKGNLILDHSHYEIPRENPGEFDEQPYRTYNVPPEALLINYRASTFHLFPQ 189 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCEL------DVVPGDLNRFTLTGCL 235 P+ + + + + + ++ L + A L D + L G Sbjct: 190 PEKNSVRVVIDPVPESLRIKNNLK-LTQDKCVAWQNSLTIEAIADKESKNNFTIILNGRF 248 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 Q ++QD ASY + + Q G ++G + Q + + QS PL Sbjct: 249 SQHCGKQSYMLSLQDSASYTDDLFRQLWIQQGGIFNGHTI-LGQAPQYLPPLKIHQSPPL 307 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARF---NVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 ++++ + K S+N+ A ++ +G N P T A+R+ L + ++ + Sbjct: 308 AEIVRGINKFSNNIAARQLYLALGTGNSSIDNSPATLAKSDAAIRRWLASKQ-MNFTELV 366 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 I +GSGLSR I+ M ++L FI+ LP+A DG+L+ R G Sbjct: 367 IENGSGLSRKERISARHMGKLLLAAFNSPVMPEFIASLPIAAVDGTLKNR--FADTPAKG 424 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL 445 KTG+L V LAG++ G+R+ V L Sbjct: 425 LAHMKTGALNNVRALAGYLIDGMGRRVIIVFLL 457 >UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=2 Tax=Bacteria RepID=Q1II05_ACIBL Length = 518 Score = 376 bits (966), Expect = e-103, Method: Composition-based stats. Identities = 133/516 (25%), Positives = 222/516 (43%), Gaps = 58/516 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP--------AGANLALMVQKVGASAPAIDY 52 M SR I L + ++ A D+ +++ + A + + + Sbjct: 1 MSRSRTIPALFFLVLIALYAPAADKLSSKIDRVLSAPDVSRAFWGIEIVSLDNGKTLYSR 60 Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTL 111 +S ++ PAS K+ T A LGPDFRF TT+ET G V+ G L DLV DP L Sbjct: 61 NSDKLFTPASNTKLFTTSTAFALLGPDFRFHTTVETSGTVDKRGRLDSDLVIVGRGDPNL 120 Query: 112 KRQ----------------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 + + N+ L + GV +DG+++ D S +A GW +D Sbjct: 121 SGRTLPYNLRTERKQPPIAALENLADQLVQKGVRYVDGDIVADDSYYAFERYGEGWAQDD 180 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEA 214 + + AP +A V+ N VS+ A + G+ AF+ + + + ++V T P+G+ Sbjct: 181 LVWEWGAPVSALTVNDNVIFVSIQPADRVGERAFVDITPFPAYYRVDNRVMTTPQGTGPR 240 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW---- 270 + ++ PG N+ TL G +P + A A++D A + + ++ L + G+T Sbjct: 241 K-IYINREPGS-NQLTLWGNIPVDDQGANEALAIEDPADFTAKLFRELLDKRGVTVYGRP 298 Query: 271 ----------------------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 G V+ V+ S PL LK++ K S N Sbjct: 299 KTKHTELASLSTFSITATASAGGGADRAPAPVSRLPLVLGQYDSQPLSADLKVINKVSQN 358 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 + A+ + R++G + GT G + R L A + + DGSGLSR +L P Sbjct: 359 LHAELLLRLLGKEK-GTAGTIEGGLEVERAFLAS-ADIRPEEYTLYDGSGLSRQDLATPH 416 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 +++L Y + F LP+AG DGSL R ++ +V AKTGSL V +L+ Sbjct: 417 AFVKLLTYAHKQPWGATFEDTLPVAGVDGSLVER--FTKSTAQSRVHAKTGSLDHVNSLS 474 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G++TT G+ + F + + + +V+ Sbjct: 475 GYLTTEKGEHVVFSILSNNHNLTNKHAIETIDAIVQ 510 >UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Aeromonas RepID=A4SLJ6_AERS4 Length = 481 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 171/479 (35%), Positives = 256/479 (53%), Gaps = 20/479 (4%) Query: 2 RFSRFIIGLTSCIAFS-VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 R L S + + VQAA + P G A++VQ G ++ M P Sbjct: 3 RLLIGFCALFSTLVPTLVQAATLTP-----PKGGQYAIIVQ--GNGGIEFARNADDMIAP 55 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETK-GNVENGVLKGDLVARFGADPTLKRQDIRNM 119 AST KV+TALAA ++LG DFRF T ++ + G + + GD+ F DPTL R D+ + Sbjct: 56 ASTMKVLTALAARLELGADFRFATDIQAQPGAKQGDAINGDIWINFVGDPTLSRMDLLAL 115 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 L GVN+I GNV ++T + +++ GW W D T CF+AP ++ I+D+NC ++ Sbjct: 116 FKQL---GVNRIKGNVYVNTGAYNGYERGNGWSWGDQTLCFAAPVSSVIIDKNCAYATI- 171 Query: 180 SAPKPGDMAFIRVASYYPVTM-FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 +A + G A VA+ P+ + +V + G Q+C L+V N + L GC+ Sbjct: 172 TATQIGRPATGNVATGVPIGIGTDRVDVMSYGDMARQFCALEVDMAKGNFYELKGCITPN 231 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 EP L FA+ D ++ ++ + +AGI G L + + + S L + Sbjct: 232 KEPQGLRFAIHDVEAWGWDNIRWAMDRAGIAHEGLLQVTHKAPGSAETLGTHYSVSLPIM 291 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLKKSDN+ ADT + +G +N PG++R+G+ AVR IL +Q G+D+GN +ADGSG Sbjct: 292 LSKMLKKSDNLYADTFLKTVGRHYYNKPGSYRSGTMAVRAILTKQ-GIDLGNATLADGSG 350 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LS HNLI+ M+ VL +I ++D EL I +LP + DG+L +R + + +V AKT Sbjct: 351 LSAHNLISARQMLSVLNFIQKNDAELGLIKLLPSSQVDGTLAWRRSVTAPMMKNRVHAKT 410 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI-----PLVRFESRLYKD 472 G++ G NLAGFI T GQR AFV + G + +PA R P FE + + Sbjct: 411 GTITGTSNLAGFIDTVGGQRKAFVMFQRGLSQDPATHERYRASKAPWPWTVFEKGVLES 469 >UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Cyanobacteria RepID=Q10X51_TRIEI Length = 487 Score = 376 bits (965), Expect = e-102, Method: Composition-based stats. Identities = 108/446 (24%), Positives = 201/446 (45%), Gaps = 25/446 (5%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 + ++V+ + ++ PAST K++T A L +L P+FR T++ G Sbjct: 53 SRWGILVETLSGKRKIYSRDAEYYFTPASTAKLLTTAAVLKELKPNFRIRTSIYGDG--- 109 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 KG++ DP+L ++++ LK+ G+ I+ ++ D + F W W Sbjct: 110 ----KGNIYIVGRGDPSLAETQLKSLAEQLKEGGIENINQ-LISDDTYFQGMAVNSNWEW 164 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D+ + AP + I ++N + L +P + F+ A + + T+ Sbjct: 165 EDVQAGYGAPINSLIFNQNAIDLVLSPQGNGQPLKVTFVNPAESKKWQIENNSVTVATNK 224 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 E D + ++G L S P+ AV + A + L+ GI+ S Sbjct: 225 KEFVEVGRDFIQP---IIRISGQLRIGSASEPVYVAVVEPADNFLNNFRRVLELEGISVS 281 Query: 272 GTLLRQTQVNEPG--TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG-- 327 +++ +Q+ T +A +S + +L++ + KKS+N+ A+ + R +G VP Sbjct: 282 -RIVKSSQITSNLNLTELAFVESPTVGELIEEVNKKSNNVYAEALLRQLGVRSKLVPNKK 340 Query: 328 ----TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 T + V+ IL + GV + + DGSGLSRHNL++P ++Q L+ +A Sbjct: 341 SDYQTLAKSLEEVKVIL-TRLGVTPNSFRLNDGSGLSRHNLVSPEALVQTLRIMANSPWA 399 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 + + LP+AG G+L R + G + AKTG++ GV LAG++ + + + F Sbjct: 400 NAYRNSLPIAGVSGTLSRR--FINSFATGNIQAKTGTISGVSGLAGYVQPINFEPLVFSV 457 Query: 444 YLSGYAVEPADQRNRRIPLVRFESRL 469 ++ +E RN +V ++L Sbjct: 458 IVNQSDLETKYLRNAIDEIVLLFTQL 483 >UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Betaproteobacteria RepID=Q47J01_DECAR Length = 479 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 109/456 (23%), Positives = 210/456 (46%), Gaps = 18/456 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYI------TQLPAGANLALMVQKVGASAPAIDYHS 54 M R + + I+ + A + + Q+PA N+A+++Q V + +P + +++ Sbjct: 1 MFIKRLAPLILAGISLAALADGLPPSVLGALKAAQIPAK-NVAVVIQAVDSGSPLVAHNA 59 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 Q PAS K++T AAL LGP + + TT+ T+ +G+L G+L + DP + Sbjct: 60 SQAMNPASVMKLVTTYAALDLLGPAYTWKTTVWTESAPVDGILSGNLYIKGSGDPRFAIE 119 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 + +++ L+ G+ QI G+V++D + F PG + + ++ P +++ Sbjct: 120 HLWSLLRQLQVRGIRQIAGDVVLDRTAFNVPSIDPGAFDDKPMRPYNVGPDGLLLNFRSL 179 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVR--TLPRGSAEAQYCELDVVP-GDLNRFTL 231 +L G + + + +Q+R GS + ++P NR Sbjct: 180 RFTLVPDN--GKPRVLMETPSEGLRVDNQLRAGNGDCGSNWKDLINVRLIPENSGNRLEF 237 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 TG PL + + A +++ K+ G +G + R V ++A + Sbjct: 238 TGTYSALCGEKPLNLSPLPADAQADGLIRALWKELGGNLNGQV-RGGTVPIGAKLLAQHE 296 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 SAPL D ++ + K S+N++A VF +G + P T + L + + G Sbjct: 297 SAPLADAVRDINKFSNNVMARQVFLTLG--NDSAPATAERSKQRISDWLAAR-NLRFGEL 353 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 ++ +GSGLSR I+ ++ ++L ++ F+S +P+ G DG+++ R L+ + Sbjct: 354 VLDNGSGLSRVERISADSLNRLLLDAWKNPVMPEFVSSMPIVGIDGTMKKR--LNSSEAT 411 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 G+ KTG+L GV +G+ A G+R AF ++ Sbjct: 412 GRAHIKTGTLDGVKAASGYALDALGRRYAFTFLINH 447 >UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTM3_METML Length = 477 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 111/486 (22%), Positives = 223/486 (45%), Gaps = 27/486 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQM 57 +F ++ + + A + + + A + ++++ VQ V + P + +++ + Sbjct: 1 MKKFTFIVSLMLLSGLAHAELPKTVAAELAQSGVPASDVSIYVQAVDSRVPILSHYADKS 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAS K++T AAL L P +R+ T L G +++GVL G+L+ + DP+ K QD Sbjct: 61 MNPASVMKMVTTNAALDLLTPAYRWKTELYQDGLIKDGVLNGNLIIKGYGDPSFKVQDFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT-QCFSAPPAAAIVDRNCFSV 176 ++ +LK++GV +I+G++LID S FA D G ++D + ++A P+A V+ S Sbjct: 121 RLLMSLKQAGVEKINGDLLIDKSYFAD-DVDNGVSFDDEKWRAYNAKPSAFSVNGRSTSF 179 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ-YCELDVVPGDLN-------- 227 + + V + + ++ + + D+ P Sbjct: 180 RFLANEIGVSVNQEFELPE--VAIVNHMKRVDGDCGNWRGRMSYDIQPYGSQSVGTQNKA 237 Query: 228 ---RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG 284 + G + ++ D YA K ++ G ++ G L + V Sbjct: 238 AKAVVSFKGIYAADCGERYIELSLFDDTQYAFFTFKKLWRELGGSFDGKL-KLQPVPANA 296 Query: 285 TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA 344 + + S PL +++ + K S+N++A + +G + P T + G+ A++ L Sbjct: 297 KKLLEQASEPLGTVVRDINKWSNNLMARQLLLTLGAEKSGAPATMQKGAAAIQDWLSTN- 355 Query: 345 GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAG 404 G+ +I +GSGLSR I+ + ++L +++ +P+ DG++++R Sbjct: 356 GLSFKGLVIENGSGLSRVERISAEHLGKMLVRAYLSPVMPEYMASMPILSLDGTVKHR-- 413 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 L ++ V+G+ KTGS+ GV ++AG++ +ASG R V ++ + R+ + LV Sbjct: 414 LEESAVNGRAHLKTGSINGVSSIAGYVLSASGHRYVMVMLVNHPNAGAS--RDAQDALVE 471 Query: 465 FESRLY 470 + RL Sbjct: 472 WVHRLP 477 >UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7M7_9PROT Length = 459 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 114/454 (25%), Positives = 209/454 (46%), Gaps = 16/454 (3%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQM 57 + LT A + A ++ + + A + ++ V+K+GA AI +++Q Sbjct: 1 MNYLFALLTLFAALNATATHLPPAVLRELKSAGIPLSATSITVRKIGAPKAAISINAEQP 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAST K++T A L LGP + + T G +ENGVL+GDL+ + DP + Sbjct: 61 MNPASTMKLLTTFAGLELLGPAYTWKTEAYLDGKLENGVLQGDLILKGYGDPKFTIEQFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 +A L+ G+ +I GN++ID S F G ND + ++ P A +++ N + Sbjct: 121 LWMAELRARGLREIRGNLVIDRSFFDLPQLDSGAFDNDPVRAYNVTPDALLLNFNTLRLR 180 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 P+ + I V + SQ+ P+ + + + V + R L G P Sbjct: 181 YI--PEGNRLRVIIEPMLEGVRLDSQL--APQAGSCEDWDDTIRVQANDERLLLQGGYPA 236 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 + +V + Y A+ + Q G + +G R ++ + ++ +S P+ Sbjct: 237 ECGEREHSLSVLSHSRYVDAVFRAAWHQLGGSLTGRQ-RDGLLSSSAQLFSTHRSEPMSL 295 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ + K S+N++A +F +G + + A+R L ++ G++ ++ +G+ Sbjct: 296 AIRDINKYSNNVMARQLFLTLGTTTS---ASIPGSTAAMRSWLTKK-GLNFPELVLENGA 351 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR I+ M Q+LQ I + I+ LP+ G DGS++ R L + K Sbjct: 352 GLSRVERISAEHMAQLLQSITESPYSAELIASLPILGIDGSVKKR--LKNSPAASHAHLK 409 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 TG+L GV LAGF+ SG++ + V +++ + Sbjct: 410 TGTLDGVKTLAGFVQAHSGKQWSVVFFINHPNAK 443 >UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax=Bacillus RepID=DACC_BACSU Length = 491 Score = 373 bits (959), Expect = e-102, Method: Composition-based stats. Identities = 124/453 (27%), Positives = 206/453 (45%), Gaps = 22/453 (4%) Query: 9 GLTSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 + + +D+ + PA GA + V+ A ++ PAS+ K+ Sbjct: 26 AALAAEKQDALSGQIDKILADHPALEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKL 85 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 +TA AAL LG ++ FTT + T G ++ L G+L + DPTL D M LK S Sbjct: 86 LTAAAALSVLGENYSFTTEVRTDGTLKGKKLNGNLYLKGKGDPTLLPSDFDKMAEILKHS 145 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN------CFSVSLYS 180 GV I GN++ D + +P PW+D + AP +A N V + Sbjct: 146 GVKVIKGNLIGDDTWHDDMRLSPDMPWSDEYTYYGAPISALTASPNEDYDAGTVIVEVTP 205 Query: 181 APKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 K G+ + V+ +T+ + +T GS + E + N T+ G +P + Sbjct: 206 NQKEGEEPAVSVSPKTDYITIKNDAKTTAAGSEKDLTIERE---HGTNTITIEGSVPVDA 262 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 +V + A YA + K LK+ GIT G + + + V+ S +S PL L Sbjct: 263 NKTKEWISVWEPAGYALDLFKQSLKKQGITVKGDI-KTGEAPSSSDVLLSHRSMPLSKLF 321 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 +K S+N A+ + + +G + G+W G + + L + GVD + ++ DGSG+ Sbjct: 322 VPFMKLSNNGHAEVLVKEMGKVKKG-EGSWEKGLEVLNSTLPE-FGVDSKSLVLRDGSGI 379 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKV 414 S + ++ + Q+L I +++ LP+AG G+L+ R + GKV Sbjct: 380 SHIDAVSSDQLSQLLYDIQDQSWFSAYLNSLPVAGNPDRMVGGTLRNR--MKGTPAQGKV 437 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 AKTGSL V +L+G+ T SG+++ F L+G Sbjct: 438 RAKTGSLSTVSSLSGYAETKSGKKLVFSILLNG 470 >UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q082P9_SHEFN Length = 554 Score = 373 bits (957), Expect = e-102, Method: Composition-based stats. Identities = 151/477 (31%), Positives = 241/477 (50%), Gaps = 42/477 (8%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 PA + L + V + +Y++Q + PAS QK++TALAA QLG DF + T L T Sbjct: 81 PAHSQLGITVWDMTTQKTVFEYNNQSLMQPASVQKLLTALAATKQLGKDFIYQTRLTTLA 140 Query: 91 N-------VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 +ENG+ GD+ F DPTLK QD+R ++A+L + G+ ++ GN+++ TS Sbjct: 141 QQPLDKSLIENGIYSGDIYIEFSGDPTLKYQDLRQLLASLSQLGITELTGNIVL-TSEQD 199 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL----------------YSAPKPGDM 187 S +APGW W+D+ C++AP + I+D+NC L D Sbjct: 200 SQLQAPGWVWDDLGICYAAPISPFIIDKNCVYGRLATTGYNKVANITMMGNRPIEISNDA 259 Query: 188 AFIRVASYYPV------TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 F+ PV T+ V + C+L + D NR+ L+GC ++ Sbjct: 260 YFVTPIVNRPVAKPAVQTLTDAVVLPAYLTESVPQCQLTLSRFDNNRYHLSGC-HVGAKS 318 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-----RQTQVNEPGTVVASKQSAPLH 296 LPLA A+ + YA I+ +L GI + + Q V+AS QSA L Sbjct: 319 LPLAIAITEPQLYAQQIVAKQLASLGIVHQLPITASIMNTEAQFMAQRQVIASHQSAALP 378 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 LL+ ML KSDN+IAD++ + +G + P + A++ IL G+D+ N IADG Sbjct: 379 QLLETMLLKSDNLIADSLLKKLGEVYYQAPSDFARSGQALKTILYS-IGIDLSNANIADG 437 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR+NL+ P ++ VL + Q + +LP +G G+L+Y+ +++ + V A Sbjct: 438 SGLSRYNLLTPEHVLSVLTTLYQQPEYRFLLELLPQSGVSGTLRYKRYFNKSPLKNHVFA 497 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDI 473 KTGS+ G+ NLAG + ++G FV + +G + P ++ ++ P F + + + Sbjct: 498 KTGSMLGIANLAGRVNVSNGHDYLFVLFENG--LSPQIKKQQKAP---FSAVFLQTM 549 >UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Bacteroides RepID=D1K326_9BACE Length = 466 Score = 373 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 127/452 (28%), Positives = 202/452 (44%), Gaps = 14/452 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 + F +I I + +D + ++ + + + V + A Y ++ Sbjct: 4 VLFFFLLILSIHSINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTAGESVYRYQDDKLYR 63 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS +K+IT++ AL+QLG D+ T+L +G +EN LKG L G DP +D+ + Sbjct: 64 PASVEKIITSVTALVQLGADYTMDTSLRYRGKIENDTLKGSLYLIGGFDPEFMDEDLDRL 123 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 V L G+ + + D S+ S GW W+D F + +++R C VS+ Sbjct: 124 VDALASKGIRYVTDTLAADVSMTDSVYWGSGWCWDDTPYSFQPYLSPLMLNRGCVDVSVS 183 Query: 180 SAPKPG--DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 A K + V+ YY V R G + L + N T++G + Sbjct: 184 PAQKDSLPKVVCTPVSDYYQVHNHGVSRNPQAGKLKITRNWLS----NGNIITVSGNV-- 237 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 S P V + L+ GI V V PL + Sbjct: 238 -SYPYTEKLNVYTSKDFFFHTFVSRLRSKGIEARTCTYADCPVTADSIVTLYTVRRPLKE 296 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARF-NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 +L+ LKKSDN+ A+++F + R + T G+DA+ ++ G + N IADG Sbjct: 297 VLERALKKSDNLCAESMFYHLAAKRSLHKRVTGEDGTDAIHAFMKTALGFNPENYKIADG 356 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 SG+S +N I+P +++ L+Y H L F LP+AG DG+LQ R + Q G V Sbjct: 357 SGVSVYNYISPRLLLEYLKYAYYHREVFLPFYESLPIAGVDGTLQNR--MKQTKARGNVH 414 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 AKTGS+ GV +LAG++ A+G ++AFV Sbjct: 415 AKTGSVTGVSSLAGYVKAANGHQLAFVIINQN 446 >UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AVY5_9CHRO Length = 492 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 105/468 (22%), Positives = 203/468 (43%), Gaps = 19/468 (4%) Query: 8 IGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 + I + ++E IT+ + ++++ + Q+ + AS K+ Sbjct: 39 VATAEPICPANLREAIEEVITRPEWRRSRWGILIKTLKDGKRLYGLDEQKYFVAASNVKL 98 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 +T AAL +LG DFR T++ G DL DP+L ++ + LK+ Sbjct: 99 LTTAAALRELGADFRIRTSVYAVGKPPRLK---DLRVVGRGDPSLTTAQLKLLAQQLKQK 155 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PKP 184 G+ I+ +++D S F P W W+D+ + + I++ N ++ L +P Sbjct: 156 GIRYIEQ-LIVDDSYFKELPLNPSWEWSDLVFNIAPSVNSLILNENAATIKLIPQQVDEP 214 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + ++ + + ++ T P+G+ D +TG L E Sbjct: 215 TQLEWLDSVAARQWQVENESITGPKGTKNTIDFNRSFTQLD---LKITGQLAVDQEADTT 271 Query: 245 AFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 A+ D A Y + L + GI + T+++ + E G +A +S PL L+ Sbjct: 272 TIAIPDPARYFLESFRQVLLEEGIEINQATIVKDSSAAEEGKELAFVESPPLIMLVDKAN 331 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 +S+N+ A+ + +++ + +A D ++Q L GV+ + + DGSGLSR N Sbjct: 332 TESNNLYAEAIAKILATQSRD-----KAAVDVIKQSLID-LGVEADSFKLVDGSGLSRQN 385 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 L++P +++ L+ +A+ + + L + G+LQ R V G + KTG+L G Sbjct: 386 LVSPEAIVETLELMAESLQGEIYRNSLAVGAEKGTLQGR--FIDTAVAGNLQGKTGTLTG 443 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 V L+G++ + Q + F ++ + R +V F S L++ Sbjct: 444 VSALSGYLNVPNYQPLVFSIIVNSTDQSSINVRKAIDEIVIFSSGLHR 491 >UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C8_PSEFS Length = 514 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 121/433 (27%), Positives = 193/433 (44%), Gaps = 15/433 (3%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 GA ++LMV+ + + ++ + +PAS K++T AA+ LGP +RF+T L G Sbjct: 75 GATVSLMVRDARSGSTLYQHNPRTRVIPASNLKLLTTAAAMDVLGPQYRFSTQLLGNGTQ 134 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 + L G+L R DPT + D + + A L GV Q+ G+++ D + F + W Sbjct: 135 QGERLSGNLYLRGLGDPTTQFADYQALAAQLAGQGVRQVQGDLVFDDTWFDAERLGVDWA 194 Query: 153 WNDMTQCFSAPPAAAIVDRNC---FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 +D + + A +A V N L +A P + P T + Q+ Sbjct: 195 QDDESTYYGAQISALTVSPNADFDAGTLLVTAKAPVAVGQPVSVVVSPSTDYVQLNNRAV 254 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 Y N LTG L + +V + + + L Q GI Sbjct: 255 SGPGNTY--GITRQHGTNLLQLTGALAPGKQSRQ-WVSVWEPTQLVANLFEQALAQQGIQ 311 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 G + V+A QSAPL +L+ +LK S+N +++ + + +G N GT Sbjct: 312 VLGRRVIGGTSPATARVLAEHQSAPLQELITPLLKLSNNNMSEALLKAMGRKTANA-GTA 370 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 +AG AV +R+Q G+D DGSGLSR N ++ + +L A+ + + Sbjct: 371 QAGVAAVADFMRRQ-GLDPMTLSQVDGSGLSRRNWVSSQNLTDLLLAAAKQPWFEAWYNA 429 Query: 390 LPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 LP+AG GSL+YR L + AKTGS+ GV +L+G+IT A G+R+ F Sbjct: 430 LPIAGDPDRMTGGSLRYR--LRGTAAQNNLHAKTGSMAGVSSLSGYITDADGRRLVFSMI 487 Query: 445 LSGYAVEPADQRN 457 + Y + R Sbjct: 488 SNNYVSDATPIRA 500 >UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEI1_BACSK Length = 489 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 121/445 (27%), Positives = 204/445 (45%), Gaps = 22/445 (4%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 AGA++A+ V+ + +++ + PAS+ KV+TA+AAL +LG D F TT+ T G Sbjct: 47 LAGASVAVSVRDGATNELLFEHNGNMLLHPASSMKVLTAVAALTELGSDHTFKTTVFTDG 106 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + VL G++ + G DPTL ++ + ++ G+ +I+G+++ D S + + Sbjct: 107 KISKRVLHGNVYIKGGGDPTLMEAELNELAQEVRNKGIKKINGDIIADESRYDDVRLSQD 166 Query: 151 WPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVASY-YPVTMFSQ 203 W+D + A +A + D V + K G + V + ++ Sbjct: 167 LNWSDESFYTGAQVSALTLSPTDDYDAGTILVEVTPGKKAGQKPIVTTQPDVKAVPIINE 226 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 T+ ++ E + D +TG +P + AV + A Y A+ K L Sbjct: 227 AVTVAAEEQKSLKIEREHGKAD---IRITGNVPIGASATRSWVAVWEPAQYTTAVFKQAL 283 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 AGI V + A ++S PLH+LL LK S+N + + + IG+ + Sbjct: 284 NNAGIDIKKADETIGYVPKKAVKQAERESMPLHELLVPFLKLSNNGHGEVLVKEIGYVKE 343 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+W AG V + +Q G G ++ DGSG+S L+A + VL + Q Sbjct: 344 G-EGSWDAGLPLVAES-TEQLGAS-GPLLLRDGSGMSHKTLVAANDLTSVLYHAQQQHWF 400 Query: 384 LNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 +F + LP+AG G+L+ R G G++G+V AKTGSL GV +L G+ T G Sbjct: 401 TDFYNGLPVAGEKERLVGGTLRNRLG----GIEGEVRAKTGSLTGVSSLTGYARTNDGDS 456 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLV 463 F ++ + E R+ +V Sbjct: 457 YLFTIMVNNFIGESQTIRHIEDEIV 481 >UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6E3_SHEAM Length = 554 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 159/477 (33%), Positives = 242/477 (50%), Gaps = 19/477 (3%) Query: 6 FIIGLTSCIAFSVQAANVDE-----YITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 F S I + + + + Y+ P N+A++ + I +S++ LP Sbjct: 84 FFADTPSSIPPASSLSPLKDIAPAWYLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLP 143 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS QK++ ALAA LGPDFRF T L +G + VL+ L F DP L ++ ++ Sbjct: 144 ASVQKLLLALAAQHTLGPDFRFHTQLFVQG-FKPPVLE-RLYIGFSGDPLLTSAELSALL 201 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 +LK+ GV I+ L+ S DKAPGW W+D+ C+++P A +D+NC SL Sbjct: 202 GSLKQQGVRTINQVYLV--SAVDKSDKAPGWVWDDLGVCYASPVAEFSLDKNCVKASLRP 259 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 K GD ++R+A +++ +Q+ P S + L VV NR+ L GC + Sbjct: 260 TEK-GDGTYVRLAKDAAISIENQLNYRPGASFKECSPHLSVV--GPNRYLLHGCYS-GKQ 315 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 LPL+ AV D ++ + LK AG S T R + ++A QSA + LL Sbjct: 316 ALPLSIAVTDTDAWLQEKVAGLLKAAGFN-SHTPKRLHTLPANAHLIADHQSATMDSLLS 374 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 MLK+SDN+IAD + + +G + + GS + L GVD+ + + DGSGLS Sbjct: 375 EMLKESDNLIADALLKQLGKRKGQDESDFYQGSKEMAANL-TLLGVDLSSANLVDGSGLS 433 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R+NL+ +MQ L I + + LP++G DG+L Y+ G + + +V AKTGS Sbjct: 434 RYNLLNARQLMQTLLLIHHTEAYASLKDGLPVSGKDGTLLYKRGFNSLPLKDRVQAKTGS 493 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 +QGV NLAGF+ + + AFV +G VEP Q +R P F + L K + Q+ Sbjct: 494 MQGVSNLAGFLRSGD-REYAFVVLENGL-VEPESQNGKRKP--GFAATLLKALLQHE 546 >UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q300_9BACT Length = 497 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 113/489 (23%), Positives = 200/489 (40%), Gaps = 32/489 (6%) Query: 1 MRFSRFIIGLTSCIAFSVQAA-----NVDEYITQ-----LPAGANLALMVQKVGASAPAI 50 MR I L +C+ V+ +++E I L A+ + V + + P + Sbjct: 12 MRSCIIFIALFTCLTLPVKVIKAEPTHLNEQIRNILQKYLLKNAHCGISVVSLKTNTPVV 71 Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADP 109 +Y S + + AS K+ T AL LG DF++ T++E GN++ +G L+G+++ R DP Sbjct: 72 NYQSNDLFMVASNMKLATTATALEYLGTDFKYNTSVEADGNIKSDGTLEGNIIIRGSGDP 131 Query: 110 TLKRQDIRN--------MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L + N + K G+ +I G+++ D SIF + WP N + + + Sbjct: 132 NLSGRFYNNNILTIPNAWLQATKNLGIQKITGDIVADDSIFDRNYINDAWPKNQLHEWYC 191 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 AP + + NC + + + S E Q+ Sbjct: 192 APTSGLSFNDNCIDIIFVPRNNVNKKVSLLIEPNTSFVTIHNECI--YTSEEKQHAYSIY 249 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 N + G + +V + Y + K+ LK GI+ G + + Sbjct: 250 RKPGTNDIYVKGKFWTNASQKREWVSVHSPSLYLATLFKEMLKNGGISVFGIARLINEND 309 Query: 282 E-----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 +A S + + I K+S N A+ + + +G G G + Sbjct: 310 RISYSNKPIKIAQTIS-TMEQSIHITNKRSQNFYAEQIIKTLGAHIKGC-GNTENGLQVI 367 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 ++ + G D I DGSGLS+ N ++P + +L Y+ H + F LP++G D Sbjct: 368 SAFMK-KLGYDSEEYKIRDGSGLSKENKLSPNMITTLLSYMNTHKHGKVFCDSLPISGID 426 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G L R + GK+ AKTG + G L+G+I T+ G R+AF ++ + D + Sbjct: 427 GGLHRR--MASLQYKGKIHAKTGYIAGASALSGYIDTSKGDRLAFSILINNFK-SLRDAK 483 Query: 457 NRRIPLVRF 465 + + +F Sbjct: 484 KAQDEICQF 492 >UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Anaeromyxobacter RepID=A7HHA8_ANADF Length = 758 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 104/425 (24%), Positives = 193/425 (45%), Gaps = 8/425 (1%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 +GA ++V V + + + PAS K++T+ AAL +LGP +RF+T L Sbjct: 72 LSGARAGVVVADVASGEVLYARDADVLLNPASNVKLVTSAAALARLGPGYRFSTELLVDP 131 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 L R DPTL + + + L G+ +I G V++D F PG Sbjct: 132 ASARAASVRTLYVRGRGDPTLVTERLWAVSGELVHQGIRRI-GEVVLDDGFFDGERIGPG 190 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV-TMFSQVRTLPR 209 + + + + AP A ++ N +V + + G + + + ++ RT+ Sbjct: 191 YDQEEGDRSYLAPTGALSLNWNTVAVYVAPGDRRGQKGRVELEPQSAYFEVVNRTRTVGP 250 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 E +V G R ++G +P S + + D Y G L L+ G+ Sbjct: 251 RGRRHVTVESSLVNGK-QRIVVSGPVPAGSRVQAVWRKIDDPPRYLGHTLAKLLELRGVK 309 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 +G + R V +V +S L ++++ + K S+N +A+ + + +G PG+W Sbjct: 310 VTGAI-RVGTVPPGAKLVHVAESETLAEIVRRLNKSSNNFVAEQLLKTLGAEAKGAPGSW 368 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFIS 388 G +A + L GV G ++ +GSGL+ N + ++ +L+ + + +++ Sbjct: 369 SKGVEAAGEFLAS-IGVSRGAYVMKNGSGLNDANRFSARQLVTLLRAMWSRFPLQAEYVT 427 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 LP+AG DG+ ++R + DG + AKTG+L V +L+G++ TA + +AF ++ Y Sbjct: 428 SLPVAGRDGTTRWR--MDGTAADGHLRAKTGTLDNVTSLSGYVETAGKRTLAFAILVNDY 485 Query: 449 AVEPA 453 A Sbjct: 486 PGRHA 490 >UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkholderiaceae RepID=Q3JVI2_BURP1 Length = 800 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 108/438 (24%), Positives = 206/438 (47%), Gaps = 15/438 (3%) Query: 10 LTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 L + + ++Q A V ++L+++V+++G PA+ +++ + PAST K++T Sbjct: 354 LPASVLVALQRARVPA--------SSLSVVVERIGDRTPAVAWNASRPMQPASTMKLVTT 405 Query: 70 LAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 A L LG D+R+ T+ G+V ENG L G L + DP L +++ ++V ++++G+ Sbjct: 406 YAGLSLLGADYRWRTSAYADGDVDENGTLHGTLYIKGTGDPKLVPEELIDLVNKIRRAGI 465 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 +DG +++D + FA + +D + ++ P + S ++ G +A Sbjct: 466 VNVDGALVLDKTFFAPQTRDLPPLDDDASAPYNVGPDPLLYAFKALSFTVTPTD-SGAIA 524 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 V + + + +++ +GS +A L + G P P AV Sbjct: 525 VDVVPALANLNVDNRLVEG-QGSCDAARPTLVTDANGELTASFAGDYPPSCGPTTTNLAV 583 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 + +++ +Q G ++SGT+ + +V VAS L ++ + K S+N Sbjct: 584 LNHSTFFARGFLALWRQTGGSFSGTIA-EGKVPGRARPVASHHGPVLSSVVHDINKFSNN 642 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 ++A +F IG P T +D +R L +G+ + +GSGLSR ++ Sbjct: 643 VMARNLFLTIGAVEHRPPATPAQSADTIRAFL-AHSGLPTDGLALENGSGLSRDERVSAL 701 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 + +LQ F+ LP+AG DG+++ R L A V G KTG+L+ V +A Sbjct: 702 GLADMLQAANASPVAQAFVDSLPIAGVDGTMRNR--LTNAPVGGNAHIKTGTLRDVRAIA 759 Query: 429 GFITTASGQRMAFVQYLS 446 G++ +A G V +++ Sbjct: 760 GYVASADGSSYVVVSFIN 777 >UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7B3_9GAMM Length = 470 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 108/461 (23%), Positives = 207/461 (44%), Gaps = 19/461 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQ 55 MR F+ L S QA + +T++ A ++++ VQ + A P +D + + Sbjct: 1 MRIGFFL--LCSWFCLLAQAQQLPAAVTEMLNKNKVAPEDVSIWVQGIEAEVPLVDLNGK 58 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKG-NVENGVLKGDLVARFGADPTLKRQ 114 Q+ PAS +KV+T + LI+LG DFR+ T NGV+ G+L G DP L + Sbjct: 59 QLRHPASVEKVLTTASGLIRLGADFRWETKFYVDSLPDANGVVDGNLYVVGGGDPFLVEE 118 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIF--ASHDKAPGWPWNDMTQCFSAPPAAAIVDRN 172 + M+ L+++GV I G++++D S++ + ++ ++A P +V+ Sbjct: 119 QLLAMLQGLQQAGVRHITGDIVLDDSLYHLSPQERDAAAFDGKPWAAYNAVPHPLMVNFR 178 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF--- 229 V + P+ G V + +Q++ + + V+ D + Sbjct: 179 T--VKMQVTPQAGKPKLALVPEIVNWKIDNQLQVRKGNCSGDGFTPSAVLERDDKGYAVM 236 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVAS 289 + G + + + + + +D + G ++ G + + + + Sbjct: 237 HVAGTYATGCGAQDVMLVLGEASEQFYYLFRDLWYRLGGSFDGA-GKVAKTPSTAKHIYT 295 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S PL ++ M ++S+N++ + +G F+ PG+ G +AVR L + G++ Sbjct: 296 GLSEPLAVQIQRMNQESNNVMTRQLMLTLGAKTFDPPGSLEKGRNAVRMTL-EAFGINTD 354 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 II +G+GLSR L + + Q+L+YI D F+ L +AG G+L+ R Sbjct: 355 GMIIDNGAGLSRLELTSAEQLAQLLRYIYLSDQGQTFLQSLAVAGESGTLRKRY--RGEA 412 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 + G+V KTG++ V + AG++ SG+ V +G + Sbjct: 413 LAGRVIGKTGTIDNVRSFAGYVRAESGRNYVVVIIGNGKSA 453 >UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1R5_SALRD Length = 498 Score = 366 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 128/469 (27%), Positives = 214/469 (45%), Gaps = 35/469 (7%) Query: 23 VDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 V + I P GA + V + ++ + PAS K++TA AAL +LGP +R Sbjct: 29 VTDTIEAAPYTGALWGIEVTNLETGERLFQHNPDHLFTPASNAKLLTAAAALRRLGPSYR 88 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLK--------RQDIRNMVATLKKSGVNQIDG 133 + T L G V NGVL+G+L+ R DPTL R+ +L+ +G+ +I+G Sbjct: 89 YNTRLYVDGPVRNGVLRGNLIVRGSGDPTLGGYAQRDDPTAVFRDWADSLRAAGITRIEG 148 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS--APKPGDMAFIR 191 ++L D + F+ GW WND+ ++A + + N + + PG + + Sbjct: 149 DILGDDNPFSDVPLGDGWSWNDVPYAYAAEINGLVFNGNTIDLEVRGRQVGAPGRVTWSP 208 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 + + V + +Q RT+PR S + E P N FT+ + E + + Sbjct: 209 FETDF-VRVRNQSRTVPRDSTSDEDYER---PFSENTFTVRSRIHPN-EVQEETLTITEP 263 Query: 252 ASYAGAILKDELKQAGITWSG-------TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 Y L+ L + GI+ G + L + V + +S PL ++++ M Sbjct: 264 TKYFTHTLRSVLLREGISVGGQGRDVDDSPLTPRYEADSVRRVGTYRSPPLREVVQTMNH 323 Query: 305 KSDNMIADTVFRMIG-------HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 +S N+ A+ + R + A G+ G+ AVR L + G+D + DGS Sbjct: 324 ESQNLYAEQLLRTLAVVGPPDTTADDLTEGSAALGALAVRTELSE-VGIDTSRVRVVDGS 382 Query: 358 GLSRHNLIAPATMMQVLQYIAQ---HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 GLSR N + P M ++L ++ D F LP+ G +G+L+YR A G+V Sbjct: 383 GLSRKNYVRPRAMTRLLVHMWSEAPSDRRAAFYDSLPMGGREGTLEYRF-PRGAAARGEV 441 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 AKTG+L G L+G++ T G +AFV + + + + D R + +V Sbjct: 442 RAKTGTLTGASALSGYVRTPRGTPLAFVIFCNHHLADAEDVRAAQDAIV 490 >UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Beggiatoa sp. PS RepID=A7C340_9GAMM Length = 405 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 118/417 (28%), Positives = 201/417 (48%), Gaps = 16/417 (3%) Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 K++T AAL L P++RF T +G +NG ++G+LV R G DP L QDI + + Sbjct: 1 MKLVTTAAALHYLSPEYRFKTEFLYQGQRQNGKIQGNLVIRGGGDPRLSSQDIWQIAKQI 60 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 K SG+N+I GN+++D F ++D+AP W + A +A ++ N V + P Sbjct: 61 KASGINEITGNLIVDVHFFDAYDRAPQWETERTQWAYDARLSALALNFNTIVVHVLPGPY 120 Query: 184 PGD--MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 G A++ A Y + + + +T+ +G + PG + ++G LP +E Sbjct: 121 IGSRLNAWLDPAPAY-IHLRNMTKTIKKGRTTIFAQRSEKEPGQVE-IRVSGNLPSHAEE 178 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + V+ YA + L++AG+ +G + + G + SA L +LK Sbjct: 179 KMIRLNVEHPIRYAAESFRAVLQEAGVKINGE-TKVVSTAQFGHKIYEHYSANLSLILKE 237 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 + S+N A+ + + I RF PG+ G +++ L +G + N I+ADGSGLSR Sbjct: 238 LNTYSNNFTAEQIVKTIAAERFGTPGSHAEGLKLMKEFL-HISGANTENVILADGSGLSR 296 Query: 362 HNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 N + + L+ + D +F++ L + G +G +R L + GK+ AKTG+ Sbjct: 297 RNRMTTQAITGFLKEMHSRFDIGPDFLAALRVMGANGVNSHR--LSNSPAKGKIRAKTGT 354 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 L GV LAG+++ Q AF +L+ R R E ++ IY+++ Sbjct: 355 LNGVSTLAGYVSNQQNQIFAFALFLNNN-------RCGSRGADRIEDKIVNAIYEHS 404 >UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Nitrosomonas RepID=Q0AJG3_NITEC Length = 475 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 198/449 (44%), Gaps = 14/449 (3%) Query: 9 GLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQQMALPAST 63 L + F A ++ + + Q A + + V++VGA P + ++ PAS Sbjct: 10 LLWGALTFPAYAVDLPDTVRQALKKTGIPEAAVGIYVREVGAERPLVSVNADVPMNPASV 69 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 KV+T A L LGP + + T + GN+ENG L+GDL+ + DP+L ++ ++ L Sbjct: 70 MKVVTTYAGLEMLGPSYTWRTKVYANGNLENGRLQGDLIIKGYGDPSLNLENFWLLLRQL 129 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 ++SG+ I G++++D S ++ + PG + ++ P A +V+ + ++ L+ + Sbjct: 130 RQSGLKDISGDLVLDYSYYSFPTENPGAFDGKRYKTYNVAPEALLVNYHTSTLHLFPESQ 189 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPR---GSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 G + + + + ++ + S DV L G Sbjct: 190 HGGVRVTADPESQLLNVQNHLKLTQKKCSTSGVRVNIRDDVPRPGHVTVMLEGDYSAHCG 249 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 ++ + ++Y + KQ T++G++ R ++ ++ S PL ++++ Sbjct: 250 QTAYYLSLHESSTYIHQLFSGLWKQLDGTFNGSV-RHGVTSKTLNPISVYHSPPLAEVIR 308 Query: 301 IMLKKSDNMIADTVFRMIGHAR--FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 + K S+N+ A +F +G + +RQ L + +D ++ +GSG Sbjct: 309 GINKFSNNVAAKQLFLSLGETESNGGEFVSPNLARSGIRQWLFSK-NMDFPELVLENGSG 367 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR I+ + +L F++ L + G DG+ + R L ++ V K KT Sbjct: 368 LSRIERISARHLNDLLNAAYFSPTMPEFMASLAVVGVDGTARKR--LKKSVVAQKAHIKT 425 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSG 447 G+L+ V +AG++ +R V ++ Sbjct: 426 GTLKDVSAIAGYVLNHKKKRYVIVFIVNH 454 >UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Legionella RepID=D1RE40_LEGLO Length = 469 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 124/472 (26%), Positives = 229/472 (48%), Gaps = 25/472 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN-------VDEYITQLPAGANLALMVQKVGASAPAIDYH 53 MR+S + L I F+ QAAN +DE I Q A + + V+ + Sbjct: 1 MRYSNCLCFLA-AILFN-QAANSQTLAEKIDEIIKQQLPHATIGVFVKDAQTGKVIYRRN 58 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 + ++ PAS+ K+ TA AAL QL PDFRF TTL K + +F P+ + Sbjct: 59 ADKLLSPASSMKLFTAAAALYQLKPDFRFATTLFQKDQ--------NYYIKFTGSPSFTQ 110 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +++ ++ + KK+ ++ I+GN++ID+S + + + G ++D+ ++AP A I++ N Sbjct: 111 KNLTELLLSFKKNHISTINGNIIIDSSQYQAPNYPSGTSYDDLGWYYAAPDTAVILNENK 170 Query: 174 FSVSLYSAPKPGDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 S L SA + G A I+ + + + +QV T+ + E +C L++ N + Sbjct: 171 VSFDLISAKQLGKPAQIKAKTTPNALKLINQVITVSK-EEEKGHCSLNLEIKPDNTIRIF 229 Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 GC+ Q P + A+ D +K L + GI G + V S S Sbjct: 230 GCMIQDKNPKLIELAIPDPILLVKQNIKKILGKNGIVLKGEI-TSGLSPADAQKVMSFHS 288 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L L+ ML++SDN+ A+++ + +G++ GT + G+ A++++L + +D+ Sbjct: 289 KSLDKLITHMLQQSDNLYANSLTKKLGYSLTGK-GTHKEGAFAIKKVLSEHTHLDMSQIE 347 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVD 411 + DG G +R+NL+ P ++ +L + + + LP AG G+L+ R + + +D Sbjct: 348 LVDGEG-TRYNLVTPEQIVLLLSDLYDDKGIQSILLHALPQAGVSGTLKER--MKKTILD 404 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 KV AKTGS+ + +L+GF+ + + F ++G + ++ Sbjct: 405 KKVYAKTGSMHDISSLSGFMVNPNEKTYIFSIIINGVNKPLEKAKALEEKIL 456 >UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELS3_OCEIH Length = 508 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 107/439 (24%), Positives = 192/439 (43%), Gaps = 19/439 (4%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 G + V + PAS KV+TA++AL LGPD RFTT + T G Sbjct: 63 LEGGITGVSVMDAANGDQLFSRNIDIRLHPASNMKVLTAVSALETLGPDHRFTTEVLTDG 122 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + VL GD+ + DPTL + D+ LKK G+++I G+++ D + + + Sbjct: 123 KIRGKVLHGDVYVKGKGDPTLLQSDLEAFAKELKKQGIHKIKGDLVGDDTWYDDVRLSQD 182 Query: 151 WPWNDMTQCFSAPPAAAI------VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV 204 W+D A +A D V + + +++ ++ Sbjct: 183 LNWSDEPFFTGAQVSALTMSPDDDYDAGTVIVEVRPSENGKKAEVTLTPENNYISIENKT 242 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 + + G + E N + G +P+ +V + +Y ++ + L+ Sbjct: 243 KMVANGEEKDISIERQ---HGNNTIVIEGEMPKDGSLSRSWASVWEPTNYVISVFRQTLE 299 Query: 265 QAGITWSGTLL-RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 + GIT+ G R + + +K+S PL +LL +K S+N +T+ + +G Sbjct: 300 EEGITFIGKSKDRFEETPSSAEIRVAKESMPLKELLIPFMKLSNNGHGETLVKEMGKVVE 359 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 + G+W G + +L + G+++ ++ DGSG+S N I + ++L I + + Sbjct: 360 D-DGSWDEGLVVMEDVLGE-LGLNMDTILLRDGSGMSHKNFIPAVELSELLYVIQEKEWF 417 Query: 384 LNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 +F S LPLAG G+L+ R + + AKTGS+ GV L+G++TTA G+ Sbjct: 418 PSFQSALPLAGHPERMVGGTLRNR--MTNSPATENAMAKTGSITGVSTLSGYVTTADGKE 475 Query: 439 MAFVQYLSGYAVEPADQRN 457 + F ++ Y + R Sbjct: 476 VVFSILINNYLGSSSTMRG 494 >UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=4 Tax=Nostocaceae RepID=Q3MFE3_ANAVT Length = 487 Score = 365 bits (938), Expect = 2e-99, Method: Composition-based stats. Identities = 108/433 (24%), Positives = 183/433 (42%), Gaps = 20/433 (4%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 ++V+ + + +Q+ PAS K++T AAL QLG DFR T++ N Sbjct: 62 RWGILVKPLSSVQTLYSRDAQKYFTPASNAKLLTTAAALQQLGADFRIRTSIYENAN--- 118 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 G+ DP+L ++ + LK+ G+ QI ++ D + W W Sbjct: 119 ----GNFTIVGRGDPSLSDTQLQALAEQLKQKGITQIRQ-LIADDTYVQGDIVNSTWQWE 173 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSA--PKPGDMAFIRVASYYPVTMFSQVRTLPRGSA 212 D+ + AP + I+++N F + L K +++ + ++ T+ Sbjct: 174 DVQSDYGAPVNSFILNQNVFGLKLTPQTVGKTPQLSWNDPNEGRQWLVINKSVTVAANQP 233 Query: 213 EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 D+ + G + S P V D Y L+ A I Sbjct: 234 SYIEVTRDLT---GKVLRIQGQVAANSTPYLAELPVVDPNYYFLRRLRTIFTTAKINLGT 290 Query: 273 TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA--RFNVPGTWR 330 TL+ + N+ VA+ QS PL LL + S+N+ A+ + R + R T Sbjct: 291 TLVASSTNNQ--QEVAAVQSPPLSQLLFETNQNSNNLYAEALLRALAFKQPRVQNKSTAN 348 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 G D ++ L + GVD ++ D SGLSR NL+ P ++Q LQ IA+ + + L Sbjct: 349 IGLDVIKVTL-DKLGVDPTGYVLIDASGLSRRNLVTPEALVQTLQGIAKTPAANVYRASL 407 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 P+AG G+L R L +G V AKTG+L G +L+G++ + + +AF ++ Sbjct: 408 PIAGKSGTLSNR--LRNTPAEGIVQAKTGTLSGAISLSGYVNSPQYEPLAFSIMVNQSEQ 465 Query: 451 EPADQRNRRIPLV 463 + R +V Sbjct: 466 PASALRQAIDEIV 478 >UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxalobacter formigenes RepID=C3XCM9_OXAFO Length = 473 Score = 364 bits (935), Expect = 3e-99, Method: Composition-based stats. Identities = 103/449 (22%), Positives = 194/449 (43%), Gaps = 10/449 (2%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 FI+ L + + + +P + + ++V++V ++ + +++ PAST Sbjct: 16 FFILALPVFAQQLPSSVKYELELAGIPENS-VGIVVEQVDSNVSRLTHNADIAFAPASTM 74 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 KV+T AAL LGP + + T G E+GVL GDL+ + DP ++++ + ++ Sbjct: 75 KVLTTYAALELLGPSYTWETGAYISGKPEDGVLYGDLIIKGSGDPVFSQKELWLFIRQIQ 134 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 +GV I GNV++D S+F + + + ++A P A +++ V L Sbjct: 135 DAGVRDIRGNVILDRSVFKTGSFDAAAFDAEPLKPYNAGPDALLLNEKKIDVRLVPNESE 194 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP--L 242 + + V + + L G ++ V+ D G + Sbjct: 195 NTVKVVFEPRLDGVKITPPL--LSNGECGNWKKDI-VLQFDDRHANFDGIYSSTCQEKIW 251 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 + Y ++ K+AG + G + T E +A +S L ++ + Sbjct: 252 SVLPYQMSNTRYFESVFSTLWKEAGGRFKGRFVDGTLPPE-ALKIAEWRSPELSSVVSTV 310 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 K S+N++A + IGH G A++ L + + G+ +I +GSGLSR Sbjct: 311 NKHSNNVMARQLLLGIGHHELGDNADESMGIKAIKNWLASK-NISSGDLVIENGSGLSRL 369 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 I+P TM ++L+ +S P+AG DG++ R L + + GK KTG++ Sbjct: 370 EKISPLTMSRILKAAFHSPVMPELMSSFPIAGKDGTMSKR--LKEDAIAGKAHIKTGAID 427 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVE 451 V +AG++ SG+R V ++ + Sbjct: 428 NVRAIAGYVLAKSGRRYIVVCMVNDPNAK 456 >UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=bacterium Ellin514 RepID=B9XRU4_9BACT Length = 514 Score = 364 bits (935), Expect = 4e-99, Method: Composition-based stats. Identities = 116/437 (26%), Positives = 199/437 (45%), Gaps = 30/437 (6%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV-EN 94 + + + ++ + ++ PAS K+ T AL +LGPD+R T+L KG EN Sbjct: 55 FGVKIVSLDTGKTIYEHDANKLCSPASNSKLYTMAMALDRLGPDYRIKTSLYAKGKPDEN 114 Query: 95 GVLKGDLVARFGADPTLKRQ--------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 GVLKGDLV DPT+ + ++ V L +GV QI G+++ D S F Sbjct: 115 GVLKGDLVIYGRGDPTINLKLHGNSMDMALQPFVDVLTNAGVKQISGDLIGDDSYFKQPP 174 Query: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVR 205 GW +D+ + A +A ++ N + + A + G + + + + ++ + Sbjct: 175 YGSGWSCDDLENYYGAEISALTINDNELILKVKPATQEGAPCELTLVPSTGYLQLINRTK 234 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T+ RG P N + G + + A +L + L + Sbjct: 235 TVARGQHRNINLYR---PLGENVVYVEGEMAVDDAGSNEDATFHNPAGMFVTLLNETLAK 291 Query: 266 AGITWSGTLLR--------QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 GI +G++ Q +E + + S P+HD+++ + K S N+ D + Sbjct: 292 RGIKITGSVRTVNWKDREVQPFKSEEWVELGAVSSLPMHDIIREVQKPSQNLYTDLMLLH 351 Query: 318 IGHARFNVPG------TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 +G T G A+R L + G+ TI +GSGLSR N+ PA + Sbjct: 352 VGTKTAKPGAAMEGTTTEELGIKALRTFLSE-IGIKRNETIFDEGSGLSRDNVTTPAATV 410 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 ++LQ++ H +I+ LP+AG DG+L+ R + + V AKTG+L+ +L+G++ Sbjct: 411 KLLQHMGHHKCSDVYITALPIAGVDGTLRKR--MKGTAGENNVHAKTGTLRWANSLSGYV 468 Query: 432 TTASGQRMAFVQYLSGY 448 TTASG+R+ F L+ Y Sbjct: 469 TTASGERLVFSMMLNRY 485 >UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, peptidase family s13) n=2 Tax=Oxalobacteraceae RepID=A6SVJ3_JANMA Length = 475 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 193/458 (42%), Gaps = 15/458 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN-----VDEYITQ-LPAGANLALMVQKVGASAPAIDYHS 54 + S +I + F+ AA V E + + + + VQ+V P I + Sbjct: 7 LPLSLALIFSFTVAPFAAYAAEGLPTVVSEALKRSAIPQSAVGTYVQEVSGQKPWIAVNE 66 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 PAST K++T+ AAL LGP F + T G + VL GDL+ + DP L + Sbjct: 67 TTGFNPASTMKLVTSDAALELLGPTFNWKTQAYMTGTLNGDVLDGDLIIKGSGDPKLVTE 126 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 + + ++ +G+ +I GN+++D SIF D + ++A P A +++ F Sbjct: 127 NFWQFLRKIRAAGIREIRGNLILDRSIFEDMPYDAAQFDGDPLKPYNAGPDALLLNYKVF 186 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 + + + + L G+ +L G ++ TG Sbjct: 187 AFHFLPNVARNQVDITIDPPVATYPVMAPA--LTNGACGDWQGKLLPNMGRVST-NFTGS 243 Query: 235 LPQRSEPLPLAF--AVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 + + + Y G + + G ++G + V V QS Sbjct: 244 YSAACGEKTWYLHPYLMNHSEYFGVVFRQLWNDVGGVFNGAV-NNGMVPPAARFVTEWQS 302 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L ++++ + K S+N++A + + VP + G+ V+ L + G+D + Sbjct: 303 TSLPEVIRDINKYSNNVMARQLLLTVAADVLKVPASPERGARVVKTWLANK-GMDTSQVV 361 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 I +GSGLSR I M ++L Q F+S LPL GYDG+++ R L + V G Sbjct: 362 IENGSGLSRTERIPVGVMGRMLVSTFQSPTMPEFMSSLPLVGYDGTMRKR--LTKQTVAG 419 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 + KTG+L V +AG++ ASG+R A V ++ Sbjct: 420 RAHIKTGTLNDVRAIAGYVLAASGKRYAVVCIINHPNA 457 >UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Nostocaceae RepID=UPI0001C16732 Length = 504 Score = 363 bits (932), Expect = 7e-99, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 198/443 (44%), Gaps = 20/443 (4%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 ++++ + + +Q+ +PAST K++TA AA +LG DFR T++ Sbjct: 75 RWGILIKNLSSDQILYSRDAQKYFIPASTTKILTAAAAWQKLGKDFRIRTSIHQGD---- 130 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 +G+ DP+ + + L++ G+ I+ +++D S F W W Sbjct: 131 ---EGNFYLVGRGDPSFNNAQLTALAQKLQQRGIRSIN-KLIVDDSYFQGEYIDASWQWE 186 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D+ + AP + +V+ N ++L K G+ I ++ + + ++ E+ Sbjct: 187 DIQADYGAPVNSLMVNENTGILTLSP-NKIGEKLNITWSNDMELYSGIENNSITVAENES 245 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL 274 ++ ++ + G LP S + +V D L+ + GI Sbjct: 246 RFFQVTRDLKG-QVLKIDGKLPINSPSQTIGLSVIDPIDNFLKNLRLTWAKVGINVKEIQ 304 Query: 275 L----RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF--NVPGT 328 + ++ E +A +S L DLLK + + S+N+ A+++ R +G++ T Sbjct: 305 PIFEYQHYKIAEQKPEIAVVESLTLPDLLKEVNRNSNNLYAESLLRHLGNSESTNKNETT 364 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 G ++ L + G++ +I DGSGLSR NLI+P +++ LQ +A+ + F + Sbjct: 365 VNQGLKILKTTLSE-WGIEPNTYMIVDGSGLSRKNLISPEALVKTLQVMAKSPDGNLFRA 423 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 L G +G+L+ R + G V KTGS+ GV +L+G+I + + F ++ Sbjct: 424 SLATGGMNGTLKNR--FLKTPAWGIVQGKTGSMTGVISLSGYINVPNYDDLVFSMIVN-Q 480 Query: 449 AVEPADQRNRRIPLVRFESRLYK 471 + P+ R ++ ++L+K Sbjct: 481 SQHPSAVRKAMDEIIILLAKLHK 503 >UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M0Q1_BACS4 Length = 494 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 111/456 (24%), Positives = 203/456 (44%), Gaps = 22/456 (4%) Query: 11 TSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 + + ++DE I + + V+ + + Q+ PAS K++T Sbjct: 29 AAALDTLALKEDLDELIIHHSDINHGKIGVSVRSFQTGELLYEQNVNQLLTPASNMKILT 88 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 ++AAL LGP++ FTT L GN +LKG++ + D TL DI +V+ LK+ G+ Sbjct: 89 SIAALELLGPNYHFTTELLIDGNTRWQLLKGNVYIKGKGDATLLPTDIEKLVSELKQQGI 148 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAI------VDRNCFSVSLYSAP 182 I G+++ D S F S PW+D + AP +A V+ + + Sbjct: 149 KYIFGDIVADDSWFDSIRHPIDMPWSDEMYGYGAPISALTVAPKKNVEGGTIIIEIMPNE 208 Query: 183 KPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + G A I+ V + ++ T+ + N+ + G + Q + Sbjct: 209 QIGQPAVIKTVPDTEYVEVINESITVTDSERNNISIKKK---HGTNQIYINGHINQTEKK 265 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + +V + +Y + + LK+ I G + + + S+PL +LL Sbjct: 266 IEKLMSVWEPTNYVLHLFSEYLKKEEIRHLGNV-TLGDTPKEAKLFTVHHSSPLSELLFP 324 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 +K SDN++ +++ + +G ++ G+W G A+++ L + NTII DGSG+S Sbjct: 325 FMKYSDNVLGESITKEMGKFKYG-DGSWECGLRALQEAL-AHYDMKTENTIIRDGSGISH 382 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSA 416 N I+ + ++L I + F S LP++G+D G+L+ R + + GKV A Sbjct: 383 VNAISTNDITKLLYEIKKEHWFPLFKSSLPISGHDSKYLGGTLKDR--FTNSRMKGKVKA 440 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 KTG+L V +L+G++ T + + F + Sbjct: 441 KTGTLTSVSSLSGYLETKGEESIIFSIITNDITNSK 476 >UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cystobacterineae RepID=Q1DDE3_MYXXD Length = 748 Score = 361 bits (928), Expect = 2e-98, Method: Composition-based stats. Identities = 109/437 (24%), Positives = 209/437 (47%), Gaps = 11/437 (2%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 ++++A + + + +++Q + A +++ ++ PAS K++T+ AAL L Sbjct: 39 ALKSALLQVLQRAPLKASRMGVLMQSLDDGAVVFSHNADELLNPASNVKLVTSAAALASL 98 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 GP+FR+ T + + L R DP++ + + +VA L +GV + G ++ Sbjct: 99 GPEFRYDTEFLVEPELGADGKVKTLYVRGKGDPSMTTERLWGIVAELWHAGVRDV-GEIV 157 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 +D S F + PG+ D + + AP A ++ N ++ L PG + + Sbjct: 158 VDDSWFDAERTPPGYDQEDTDRAYMAPTGAVSLNWNAVAIYLRPGNAPGAKGVVEMDPPS 217 Query: 197 PV-TMFSQVRTLPRGSAEAQYCELDVVPGDLNR-FTLTGCLP-QRSEPLPLAFAVQDGAS 253 + +Q+ T PR A+ + P L + + G LP +R + + + + Sbjct: 218 DYFVVENQLTTGPR---RARRVSVTSDPSGLQQKIVVRGQLPGERGGAVSVWKKIDNPPM 274 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 Y G LK L G+ G + + + + ++ QS LLK + K S N +A+ Sbjct: 275 YFGQSLKQMLVTRGVKMKGKV-KLGKTSTKARMLHVSQSDTFDVLLKRLNKLSSNFVAEQ 333 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + + +G PG++ G D V Q L + G+ G ++ +GSGL+ N + + Q+ Sbjct: 334 LLKTMGAELRGSPGSFTKGVDVVEQFLERDVGIPRGTYVMKNGSGLNDANRFSATQLNQL 393 Query: 374 LQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 L+++ Q ++S +P+AG DG+L+YR + G++ AKTG+L+ V L+G++T Sbjct: 394 LRHMVQRFPFSPEYLSSVPIAGKDGTLKYR--FEGSDAVGRLRAKTGTLESVSALSGYVT 451 Query: 433 TASGQRMAFVQYLSGYA 449 +A G+R F + +A Sbjct: 452 SAGGERFTFSIMANDFA 468 >UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDV4_RHOM4 Length = 477 Score = 361 bits (926), Expect = 4e-98, Method: Composition-based stats. Identities = 123/449 (27%), Positives = 196/449 (43%), Gaps = 33/449 (7%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A L V V + + +++Q LPAST K++T AAL LGPD+R+ T L G Sbjct: 40 EQAFWGLYVADVESGRVLVAQNAEQGLLPASTHKLLTTAAALDLLGPDYRYQTVLYFVGQ 99 Query: 92 VENGVLKGDLVARFGADPTLKRQD------IRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 V+ L+GDL+ R DPT +R L + G+ +I+G ++ D + F Sbjct: 100 VDGATLRGDLILRGSGDPTFGSPSWPGPDPLRTWAQELARMGIRRIEGRLIGDDNRFDDR 159 Query: 146 DKAPGWPWNDMTQCFSAP----PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 A GW + +T + N + + + +AF + Y +T+ Sbjct: 160 PYADGWDIDYVTTQINLGLGFAVGGLSYHDNIVRLHMQATRPGAPLAFTQEPFDY-LTIE 218 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 ++ T R EA E + LTG +P + V + YA A + Sbjct: 219 NRAYTAARRYGEAIRIERAFAS---EQVRLTGSVPATYRG-TIELPVANPTRYALAAFRH 274 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTV-----VASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 L+QAGIT + L ++ P + S PL ++++++ +S N A+ VFR Sbjct: 275 YLEQAGITVAAELFDVDELPAPPRYDRRHALLVHFSPPLAEIVRVINHRSHNFYAEQVFR 334 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 + G+ + +R L++Q G+D I DGSGLSR NL+ PA + Q+L Sbjct: 335 TLS-----PDGSAEGAARRIRAFLQRQ-GIDTRGLTIRDGSGLSRKNLVPPAVLGQLLVA 388 Query: 377 IAQHDNELNFISMLPLAG-YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 + H N F++ LP G +L+ R V AKTGSL V L+G++TT Sbjct: 389 MQHHPNRDAFVASLPQGGTRRSTLEDRLRDVP------VRAKTGSLLHVRTLSGYLTTRD 442 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G +AF + + + +VR Sbjct: 443 GHTLAFALMANNFTTPSSRIVRTLDEMVR 471 >UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMJ1_THIDA Length = 488 Score = 360 bits (923), Expect = 9e-98, Method: Composition-based stats. Identities = 114/452 (25%), Positives = 207/452 (45%), Gaps = 16/452 (3%) Query: 17 SVQAANVDE-YITQLPAGA----NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 SV AA + E ++ L +A++VQK+ A P + ++++ PAS K++T+ A Sbjct: 31 SVPAAELPEGFVAALDTAGIPRERVAVVVQKLDAEQPLLSHNAEAALNPASVMKLVTSFA 90 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 AL QLGP +R+TT L G V +GVL GDLV + DPTL + + + L+ GV+Q+ Sbjct: 91 ALDQLGPGYRWTTELWLDGPVAHGVLGGDLVVKGRGDPTLTLERMWLLQRALRARGVSQV 150 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 G +++DT F + PG + ++A P + + N +V L + + + Sbjct: 151 RGRLVLDTGYFVLPELDPGAFDGEPLALYNALPGPLVANFNAITVHLRPNGE--TVRVVP 208 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG--DLNRFTLTGCLPQRSEPLPLAFAVQ 249 + V + S++ + ++ G L+ + Sbjct: 209 DVALPGVDLSSELVLSDEAGCDGWSDGIEPRFTVEGGRALVFGGRYAAACGERSLSLNLF 268 Query: 250 DGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 + A+ + + ++G G T+ + P A S PL + L + K S+N Sbjct: 269 EPATTFDFMFRGLWAESGGRIDGATVFGAVPASAPALRFA---SEPLTEALVRLNKYSNN 325 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 ++ +F +G + P T +DAVR L ++ G+ +I +G+GLSR ++ A Sbjct: 326 LMTRNLFLTLGAEAYGPPATPEKAADAVRASLTRR-GISTRKLVIENGAGLSRIERLSAA 384 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 + Q+L+ + F S LP+ DG+L+ R + + + G KTG+L+ V LA Sbjct: 385 ALTQLLRAAYRSPLFAEFESALPIVAIDGTLKRR--FNGSPLAGNAHLKTGTLRDVSALA 442 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 G++ G+R +FV ++ ++ R + Sbjct: 443 GYVVDVRGERWSFVMLVNHAQARRSEAAQRAL 474 >UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AA2_SOLUE Length = 502 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 122/475 (25%), Positives = 211/475 (44%), Gaps = 41/475 (8%) Query: 22 NVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 + + I PA A + + + + + + +PAS K+ + AL +LGPD Sbjct: 29 AIQKLIDSSPAARTAFWGIQIVDLASGKTLYELNPDHYFVPASNAKLFSTALALTRLGPD 88 Query: 80 FRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDI---------------RNMVATL 123 + F T + + G + GDL G DP L + I ++ L Sbjct: 89 YTFQTRVFADAPPDSQGRISGDLRLIGGGDPNLSARAIPYRMGPPTGNPLAAIEDLADQL 148 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 G+ + G+++ D + + A GW +D P +A + N ++S++ Sbjct: 149 AARGIRIVSGDIVGDDTWYVWQPYAVGWAIDDPQSDDGPPISALTLSDNALNLSVHPGAA 208 Query: 184 PGDMAFIR-VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 G++A + + ++VRT+ G + +PG + L G +P R Sbjct: 209 VGEVAELAFSPPLEFYRIENRVRTVAAGG--ERRVHFHRIPGSRDAV-LWGTIPLRDRGQ 265 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--------------PGTVVA 288 + +V+D A +A L++ L+ GIT G Q G +A Sbjct: 266 DMLTSVEDPAEFAAEALRNALEARGITVEGAARSQHLFPNQLADLTQAPPSEAVGGVELA 325 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 ++ SA L + L++ K S N+ A+ + R +G AR NV G++ AG ++ L AGV+ Sbjct: 326 NRSSARLVEDLRVTAKVSQNLHAELLLRAVGRARRNV-GSFEAGMTEMKIFLAD-AGVEP 383 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 + DGSGLSR +L+ PAT++++L+++ N++S+ P+ G DG+L R G Sbjct: 384 TGYNLLDGSGLSRLDLVTPATVVRLLRFMYDSPARDNWLSIFPIGGQDGTLSTRFG--GT 441 Query: 409 GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP-ADQRNRRIPL 462 G+V AKTGSL V L+G+I G +AF ++ Y A+ R + Sbjct: 442 PAAGRVLAKTGSLSHVSALSGYIQRLDGTWLAFSILVNNYGGRSVAEVRGVMDRI 496 >UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Actinomadura sp. R39 RepID=DAC_ACTSP Length = 538 Score = 358 bits (919), Expect = 3e-97, Method: Composition-based stats. Identities = 120/455 (26%), Positives = 189/455 (41%), Gaps = 22/455 (4%) Query: 22 NVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++D + GA ++V + LPAS K+ TA AAL LG D Sbjct: 57 DIDAILEDPALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALEVLGADH 116 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 F T + + DL DPTL +D+ M A + SGV + G++ D + Sbjct: 117 SFGTEVAAESAPGRRGEVQDLYLVGRGDPTLSAEDLDAMAAEVAASGVRTVRGDLYADDT 176 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVAS 194 F S W D +SA +A V D VS+ A + A+ Sbjct: 177 WFDSERLVDDWWPEDEPYAYSAQISALTVAHGERFDTGVTEVSVTPAAEGEPADVDLGAA 236 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 + ++ T GSA + P N +TG LP + P+ V + A+ Sbjct: 237 EGYAELDNRAVTGAAGSANTLVIDR---PVGTNTIAVTGSLPADAAPVTALRTVDEPAAL 293 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 AG + ++ L+ G+T G + + V+A SA L ++L +K S+N A+ Sbjct: 294 AGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMKFSNNGHAE 353 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 + + IG GTW AG V + L GVD ++ DGSGLSR NL+ T++ Sbjct: 354 MLVKSIGQETAGA-GTWDAGLVGVEEAL-SGLGVDTAGLVLNDGSGLSRGNLVTADTVVD 411 Query: 373 VLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 +L + + LP+AG G+L R + +G V AKTG++ GV L Sbjct: 412 LLGQAGSAPWAQTWSASLPVAGESDPFVGGTLANR--MRGTAAEGVVEAKTGTMSGVSAL 469 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 +G++ G+ +AF +G++ I + Sbjct: 470 SGYVPGPEGE-LAFSIVNNGHSGPAPLAVQDAIAV 503 >UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Chroococcales RepID=Q4C8Q4_CROWT Length = 491 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 99/449 (22%), Positives = 199/449 (44%), Gaps = 19/449 (4%) Query: 13 CIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + + + +D + Q ++ ++V+ + + +SQ+ +PAS K++T A Sbjct: 43 SVCQADLKSKIDTILDQEELKRSHWGILVKNLDNQTTLYELNSQKYFIPASNVKLLTTAA 102 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 LI+ G +++ T + G+ N + L DPT + + + LK G+N I Sbjct: 103 TLIKFGANYQIKTPVYVSGSYPNLSV---LKIVGQGDPTFNSKQLETLAKELKARGINSI 159 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA--F 189 D N+++ S P W W D+ ++ I++ N ++L + +A + Sbjct: 160 D-NLIVQDSPLEKPSINPTWEWEDIQFYYAPAVNKLILNENTVILTLNTQEIGEKLAMDW 218 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + + ++ T G ++ Y T+TG L S+P L V Sbjct: 219 SDSIAANQWIIDNKTVT---GEEDSSYSVSINRNFAKPLLTITGSLAINSDPRILGMTVV 275 Query: 250 DGASYAGAILKDELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 + Y ++ L++ GI ++ E + S PL +++ + S+N Sbjct: 276 NPGEYFLNSVQFYLEKEGINIIKSQVVYGDSATENLVKIIEINSDPLQEIITKTNQDSNN 335 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 + A+++ ++ V GT S + + + G+D + + D SGLSRHNL+ P Sbjct: 336 LYAESLLNLL------VNGTPENSSLDNLKEILTELGLDTNSYHLKDASGLSRHNLVTPE 389 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 T++ +L +A+ +N+ LP+ G +G++ R + ++GKV AKTG+L G +L+ Sbjct: 390 TLVNLLTLMAETPEGINYRDSLPIGGVNGTITNR--FKKTIIEGKVQAKTGTLSGTSSLS 447 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRN 457 G+I + +AF ++ ++ + R Sbjct: 448 GYINPPNYAPLAFSILVNKSDLKSSQLRQ 476 >UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cyanothece RepID=B7JUC0_CYAP8 Length = 501 Score = 355 bits (910), Expect = 3e-96, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 204/462 (44%), Gaps = 23/462 (4%) Query: 18 VQAANVDEYITQLPAG-----ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 V +A+V E I + + ++VQ + + + LPAS K++T AA Sbjct: 54 VCSADVAELINDIITQDKFKRSRWGILVQTLESGDMLYALEKDKYFLPASNVKLLTTAAA 113 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L + G +FRF T + GN + L DP+L + ++N+ LK GV QID Sbjct: 114 LFKFGSEFRFKTPIYISGNFPHLK---TLRLVGKGDPSLTTEKLQNLAKLLKLRGVTQID 170 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFI 190 +++I+ P W W D+ ++ I++ N +++L +P + + Sbjct: 171 -HLIIEAENIDESGINPTWEWEDVHYNYATAVNDLILNENSVTLTLVPQKIGEPLKLEWS 229 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + Q T +G+ + E + LN + G L SEP AV + Sbjct: 230 DPIAAEQWQVNHQAITGKKGTPYSIAIETKLGQPILN---IKGELAIDSEPDQFGLAVVN 286 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNE-PGTVVASKQSAPLHDLLKIMLKKSDNM 309 +Y LK L + GI + + Q + + + +S L L+ + + S N+ Sbjct: 287 PNAYFLETLKTILIREGIGVNSATINQLKKDSNDDKKMTELESENLDKLVTKVNQDSHNL 346 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+++ +++ + R N ++ + + + L Q GV+ + + DGSGLSR NL+ P Sbjct: 347 FAESLLKLLANDRMN-----KSNLEGLNETLTQ-LGVNPISYQLKDGSGLSRQNLVTPEA 400 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 ++ L+ +A+ + + L + G +G+L+ R + G V AKTG+L G L+G Sbjct: 401 LVSTLRLMAKTPDAKTYQQSLAIGGVNGTLKNR--FQGTPIQGIVQAKTGTLLGTSTLSG 458 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 ++ + + F ++ V + R ++ S+L K Sbjct: 459 YLQPPNYPELVFSIMVNQSEVSLPELRQGIDDIIILLSQLKK 500 >UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZN5_THIIN Length = 501 Score = 353 bits (907), Expect = 6e-96, Method: Composition-based stats. Identities = 115/441 (26%), Positives = 184/441 (41%), Gaps = 16/441 (3%) Query: 9 GLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 L + +A +++ A + + + A ++Q + + +P I ++ + PAS K++T Sbjct: 54 ALPAGVAQALETARIPQQ--------SCAFVLQPLDSPSPQIAFNGAALMNPASVLKLVT 105 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 AAL LGP + + T + G + GVL+GDL DP L ++ ++ L+ G+ Sbjct: 106 TYAALRILGPAYVWKTPVYATGPIRAGVLQGDLAFVGSGDPHLMADNLWSIAVRLRDLGI 165 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 +I G+VLID F PG D T ++ P +V+ + + G Sbjct: 166 RRIRGDVLIDRQAFDLPPHNPGAFDGDATAPYNVGPDPFLVNFGVLRLGFVPDAQ-GQQV 224 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA- 247 + V + L + +L G P A Sbjct: 225 RVTVEPPVAGFDLREAPKLTSAACGNWKDKLRADWKQPFAPRFAGGFAAACGPQTWNIAP 284 Query: 248 -VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKS 306 V D A Y +L Q GI W G + R + T + S L L++ + K S Sbjct: 285 EVSDNA-YVQRLLAALFAQVGIDWKGRV-RTANLPAGATELTVWDSPALAVLVRDINKYS 342 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 +N++A VF + TW AV Q L + + ++ +G GLSR I+ Sbjct: 343 NNVMAQQVFLTLALQAGAQRATWGLAQQAVEQWLSTH-NLSMPGLVLDNGCGLSRIARIS 401 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 A + +L+ FIS LPLAG DG+L R G++ AKTGSL GV + Sbjct: 402 AADLNALLRSAWNSPVMPEFISSLPLAGEDGTL--RRHFRDPDTAGRIHAKTGSLDGVLS 459 Query: 427 LAGFITTASGQRMAFVQYLSG 447 LAG+ T +GQR F ++ Sbjct: 460 LAGYAQTRAGQRYTFAALVND 480 >UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bacteroidales RepID=A6LH98_PARD8 Length = 485 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 127/496 (25%), Positives = 218/496 (43%), Gaps = 36/496 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQ 55 M L SC+ SV A V + I Q GA+ +L+V+ V Y + Sbjct: 1 MIRKISFFFLISCLYLSV-GAQVPQPIKQFLRKPYMEGASFSLIVKDVHNGETVFAYDTL 59 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + PAS K +T AL LG D+RF TTL G++E G+LKG+L + DP+L Sbjct: 60 RQLTPASVMKTVTTATALEILGEDYRFPTTLAYDGSIEKGLLKGNLYIKGSGDPSLGSAH 119 Query: 116 --------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 ++ ++ LKK G+++I G V+ D SIF + + W DM + A Sbjct: 120 FAPYHKRFLQEWISALKKVGIHKIQGAVIADESIFDTEGTSFKWVGEDMGSYYGAGSYGL 179 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 V N + + L + F T + S+++ + + P + Sbjct: 180 CVFDNLYKLGLQTGAPGSRPKLKGTEPELSGIHFHNYLTAQQVSSDSSF--IVGAPFATD 237 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT-----LLRQTQVNE 282 R+ L G +P E PL + D A + L +L+ GIT + +LR+ + Sbjct: 238 RY-LYGIVPANREWYPLKGDIPDPALFLADYLTRQLEHEGITVGESPSCFRILREAGRWQ 296 Query: 283 PG--TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG----TWRAGSDAV 336 PG T + + S L +++++ S N+ AD + + IG G ++ G + Sbjct: 297 PGKRTEIVTTYSPTLREIVEVTNHVSHNLFADALIKTIGLRYTPRKGEVISSFNRGIQVL 356 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-AQHDNELNFISMLPLAGY 395 R + + G+D+ + DGSGL+ N ++ A + +L Y+ + F LP+AG Sbjct: 357 RDYWQGK-GLDLSCVWMYDGSGLAVTNKLSTAFVADLLIYMRTRSQQHTAFYESLPVAGV 415 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 +GS+ R L + + GK K+GS+ V AG+I ++ A +++ Y+ D Sbjct: 416 EGSV--RNFLKGSSLQGKAHLKSGSMSRVKGYAGYI-NKGDKQYAIALFVNNYSC---DG 469 Query: 456 RNRRIPLVRFESRLYK 471 R + + + +L+ Sbjct: 470 RPMTVAIEKLLLQLFN 485 >UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=9 Tax=Xylella fastidiosa RepID=Q3R3H3_XYLFA Length = 498 Score = 352 bits (903), Expect = 2e-95, Method: Composition-based stats. Identities = 114/441 (25%), Positives = 193/441 (43%), Gaps = 17/441 (3%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 G+ +AL V+ ++ A PAS K++T +A LG D++F T+L T G Sbjct: 59 DGSLVALTVRDGKTGDVLYARNTWSRASPASNLKLVTLYSAFSVLGSDYKFETSLMTDGT 118 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + G L G+L + DPTL D + L G+ +IDGN+++D + F S GW Sbjct: 119 QKEGHLSGNLYLKGTGDPTLSADDYDRLAKDLAARGIRKIDGNLVLDDTSFDSIALGSGW 178 Query: 152 PWNDMTQCFSAPPAAAIV----DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 +D + FSA +A D N SV + + + + ++ + + + Sbjct: 179 MIDDEDKYFSAQISALTFSPNADFNAGSVIIDVSAAGTENSTPKITVLPRNNVVKVINRV 238 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 G+ A N ++G + L +V + I + LK+ G Sbjct: 239 VNGNTSAVTVSRAR---GSNDIYVSGTVKAGDSIQELC-SVWMPSLIVSDIFQTALKRHG 294 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 I +G + ++ +QSAPL L+ ++K S++ +A+ + IG N G Sbjct: 295 IEVAGHAVVGQATPMQALMLVRRQSAPLESLVIPLMKLSNDTMAEIFLKSIGRKSLNQ-G 353 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 + AG A +L G++ + + DGSGLSR+NLI + +L + F Sbjct: 354 SASAGIQATLSVLAMD-GINSESLVQVDGSGLSRYNLITSRILTDILLAARKKPWFAAFY 412 Query: 388 SMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + LP+AG G+L+ R + +GKV AKTGSL GV +L+G++T A + F Sbjct: 413 ASLPVAGQPDRLIGGTLRNR--MRGTAAEGKVIAKTGSLTGVSSLSGYVTAADEYPLVFS 470 Query: 443 QYLSGYAVEPADQRNRRIPLV 463 L+ + + + Sbjct: 471 ILLNNLIISADQTEDTLAETL 491 >UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 family n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWP7_DICNV Length = 460 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 192/443 (43%), Gaps = 10/443 (2%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 IA + A VD A +++++VQ V + P ++ + + PAST K++T A Sbjct: 6 AIAQQIPVAIVDLLNKHHLAQEDVSVVVQNVRNTVPLVNLNDTTLRAPASTAKLLTTAAG 65 Query: 73 LIQLGPDFRFTTTLETKG-NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 LI++ D+R+ T NGV +G+L + G DP L + + M+ L+ G+ I Sbjct: 66 LIRMSADYRWQTEFYLDKLPDANGVSQGNLYIKGGGDPFLVEEQLTQMLQALRDQGLRHI 125 Query: 132 DGNVLIDTSIFA--SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 GN+++D S++ ++ ++A P +V+ V + + Sbjct: 126 TGNIVLDMSLYQLPPEERDAAAFDGHPLSAYNAIPNPLMVNFRTIKVQIVPQGDR-AVRL 184 Query: 190 IRVASYYPVTMFSQVRTLPRGSAE--AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 + + T+ +Q+ + + A L R ++G L A Sbjct: 185 LLSPNIANWTIENQLTISNKSCQKNYAPNVALIREENGFARLQVSGAYSTACGACELTLA 244 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 + + + + Q G ++ G+ T V + + + S PL + ++ M + S+ Sbjct: 245 LGEASEQFYYLFYQIWHQLGGSFDGSGTIAT-VPKTAKIYYTGLSLPLAEQIQKMNQLSN 303 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++ + +G + P +G AV + LRQ GV + + II +GSGLSR ++ Sbjct: 304 NVMTRQLMLTLGAFAYGQPANLESGRRAVLETLRQ-FGVPLEHAIIDNGSGLSRQTRVSA 362 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 + +L + + FIS L +AG+ G+L+ R + G++ KTG++ V + Sbjct: 363 GDLATLLFKMYHSEYADTFISSLAVAGHSGTLKKR--FRGEKLAGRIYGKTGTIDEVRSF 420 Query: 428 AGFITTASGQRMAFVQYLSGYAV 450 AG++ +G V +G Sbjct: 421 AGYLLAENGNTYIVVIITNGKTA 443 >UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW12_EIKCO Length = 475 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 118/458 (25%), Positives = 194/458 (42%), Gaps = 18/458 (3%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + LT + F Q A ++ P A A+ VQ + + + + + PAST K++ Sbjct: 15 LLLTFALFFYFQVAFAIDFGRIQPDEA--AVYVQDLDSGEVLLAHRADVSMNPASTMKLV 72 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 T AAL LG D+R+ T + G V NG L+GDL DP + D+ +M L + G Sbjct: 73 TTFAALRGLGGDYRWQTQWRSSGTVANGALQGDLYWVGSGDPAFDQPDLLDMQQQLVRQG 132 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 + ++G V++D ++ A G+ ND + F PP ++ ++ G Sbjct: 133 IVSLNGKVVLDRRVWGGLASAEGFE-NDADESFVVPPDPHMIAYKALWITAARNET-GQP 190 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 AF+ Y + T G + + G LP + Sbjct: 191 AFLLNPPLYGIQTDLSQLTETDGRCGKLSNHVS-AKFENGMLVFRGRLPAACMGEKMFIN 249 Query: 248 VQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKS 306 + D +A + G G + ++A+ S L ++L M K S Sbjct: 250 LFDAPRFAEESFRGYWLAQG--LGGLYGFGRGAAPSNSRILATHFSKSLGEVLTDMNKHS 307 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 +N+IA +VF +GH + N P + + AVR+ L AG+D ++ +GSGLSR + Sbjct: 308 NNLIARSVFLTLGH-QANGPHSVQNAEAAVRRQLVS-AGLDDEALVLENGSGLSRRERLT 365 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 + +L + FI LP+AG DG+L+ R + KTG+L+ V Sbjct: 366 ARFLGSMLFQAYRSPFRDTFIHTLPIAGTDGTLRGRFRQLGRSL----RMKTGTLRDVRA 421 Query: 427 LAGFITTASGQRMAFVQYLS----GYAVEPADQRNRRI 460 LAG+ +G+R+A V ++ G + D RRI Sbjct: 422 LAGYWLPPNGRRLAVVVIINSHRSGGYLPDMDAMVRRI 459 >UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G894_9DELT Length = 543 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 106/445 (23%), Positives = 196/445 (44%), Gaps = 15/445 (3%) Query: 21 ANVDEYI--TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 A++D + + +GA + + V + + + + PAS K++T AAL LGP Sbjct: 94 ADLDALVDGARDLSGAQIGVSVVDLASGEVLYAREADRALNPASNAKLVTTAAALSILGP 153 Query: 79 DFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 + R++T + T G ++ +GVL+GDL + G DP+L ++ + L +G+ ++ G +++ Sbjct: 154 EHRYSTRVWTAGTIDADGVLQGDLYLQGGGDPSLVTGEVYELAGQLVAAGLTRVKGKIIV 213 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP 197 D + F PG+ AP A V+ N F V + Sbjct: 214 DATRFDGDGWPPGFEQKSEFASHRAPGGAMSVNYNTFEVHARPGAVGASPTLRLLPEVDD 273 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 + + S+ T+ + G T G + + + V D + YAG Sbjct: 274 LALESKATTVA--GKRNKLWVSTREEGGKTVVTFHGEIGTEAPAASYRYPVADPSRYAGE 331 Query: 258 ILKDELKQAGITWSGTLLRQ-TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 +L L+Q G+ Q +V + ++A+ +S L L + + K S+N +A+ + R Sbjct: 332 LLALSLRQRGVKLGNKARAQSGEVPKDARLLATHRSETLSQLCRSVNKWSNNFMAEQILR 391 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 + T + +R+ + GV+ ++ +GSGL +N I+PA M Q+L Sbjct: 392 TL---EPGDGATAEQALERMREY-TKSIGVEQSGLVLGNGSGLYDNNAISPAAMTQLLAA 447 Query: 377 IAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 + ++++ L + G DG+ + R LH + G V KTG+L V L+G+ Sbjct: 448 VYADFRIRSDYLASLAVMGKDGTTRSR--LHDSQAGGWVRVKTGTLDDVSALSGYAGAQG 505 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRI 460 +AF ++G +E +R R Sbjct: 506 KDPIAFSILMNG--LERKQRRQARA 528 >UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7A0_SULNB Length = 577 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 105/447 (23%), Positives = 194/447 (43%), Gaps = 7/447 (1%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVG-ASAPAIDYHSQQMAL 59 M+ S + ++ A ++++ +++ G ++ ++ + Sbjct: 1 MKRSIVWFFALTMYIHALPAGINQIIGKSGIPKKDISIYIKEAGNSNRVVASLNADKSRT 60 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS KV++ AA+++LG D+R+ T + G ++NGVL GDL+ + DPTL +D+ + Sbjct: 61 PASVVKVLSTYAAVLKLGFDYRWPTKFYSTGKIKNGVLYGDLLIKGFGDPTLSDKDLPEI 120 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 VA +K G+ QI GN++ID S F K ++A P A + + ++ + Sbjct: 121 VAKIKAKGIRQITGNIVIDRSYFKVGTKDNSGFDQHTYSPYNAMPDAMMFNERISTICVT 180 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 ASY V V RG ++D + L G + + Sbjct: 181 PKKNVVTKQTPD-ASYRVVNKLKPVNKPCRGRYSWPSFKVD-KKQNPTTVLLKGPISKHC 238 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 L + LKD L+++G++ G R ++ + + S PL ++ Sbjct: 239 GTRKLCQVITKPYKSFYYALKDALQKSGVSVKGG-FRLNKIPRDAKELFTHYSQPLEKII 297 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 KKS+N+ A + +G + P T G AV IL+ + + G I +G GL Sbjct: 298 SKTAKKSNNLYARHIMLFLGAKMYGAPSTLSKGRQAVEYILKSRGALKSGPLHIDNGCGL 357 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SR + I + VL + ++ L +AG DG+++ R V + KTG Sbjct: 358 SRSSRITAKILAGVLDDAYTR-YGMRWMKTLSIAGVDGTIKRR--FRGTIVRNRAWMKTG 414 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLS 446 +L+ V N++G++ + +G+ V ++ Sbjct: 415 TLKRVKNISGYVKSRNGRVYTTVILVN 441 >UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=15 Tax=cellular organisms RepID=A1VU15_POLNA Length = 528 Score = 348 bits (894), Expect = 2e-94, Method: Composition-based stats. Identities = 100/423 (23%), Positives = 181/423 (42%), Gaps = 21/423 (4%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 AP + + + PAS K++T A L LGP + ++T + G + NGVL G+L+ + Sbjct: 96 APLLSWRAGSAMNPASVMKLVTTYAGLELLGPAYTWSTPVYADGPIANGVLSGNLIIQGR 155 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP L + + ++ ++ G+ I G++L+D S FA+ + PG + + ++ P A Sbjct: 156 GDPKLVMERLWLLLRRVQGLGIKTITGDILLDRSAFAASTQHPGDFDGEALRPYNVQPDA 215 Query: 167 AIVDRNCFSVSLYSAPKPGD--------MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE 218 +++ ++ P G +A +R+ P++ S R + Sbjct: 216 LLLNYKSVVMTFAPNPGSGSASISYDPPLAGVRMQPGVPLSAGSNGRAGL-AECGDYRAQ 274 Query: 219 LDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT 278 L D R G P A A D ASYA + ++ G T G + R Sbjct: 275 LQPDFADPLRMAFAGSYPAACGEKVWAIAYPDPASYAQRAIAGLWQEMGGTLGGQV-RDG 333 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 +SA L ++++ + K S+N++A +F + R + A +AVR Sbjct: 334 VAPPGLAPAFEMESASLAEIIRDINKFSNNVMAQQLFLTLSLQRPGG-ASNEASREAVRG 392 Query: 339 ILRQQAGV-------DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 + + G ++ +GSGLSR + P + ++LQ ++ LP Sbjct: 393 WWQGRFGAQNGGPGNAPDMPVLDNGSGLSRLERVTPQGLARMLQTAYVSGAMPELMASLP 452 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 ++G DG+L+ G K+G+L+ LAG++ T SG+R+ V ++ Sbjct: 453 ISGVDGTLKR---SKSQVSQGWAHLKSGTLRDATALAGYVHTPSGRRLVVVGIVNHANAP 509 Query: 452 PAD 454 A Sbjct: 510 AAR 512 >UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV28_CYAP4 Length = 490 Score = 348 bits (893), Expect = 3e-94, Method: Composition-based stats. Identities = 109/436 (25%), Positives = 190/436 (43%), Gaps = 16/436 (3%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 ++VQ +G + Q +PAS K+ T AAL+++G FR+ T +G+ Sbjct: 54 GRWGIVVQTLG-GKTLYSQAADQYFIPASNVKLFTTAAALLRMGAKFRWITPFYARGS-- 110 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 G +L DPTLK+ D+ + A L + GV +I + D S+ + P W W Sbjct: 111 -GATLAELRVVGQGDPTLKQTDLEQVAADLHRQGVRRIRQLQVEDRSL-DTTGINPTWEW 168 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D+ + P + IVD N ++L +P + F+ + + +Q RT+ Sbjct: 169 GDLQSANAVPVSRLIVDENTIGLNLLPQAIGQPLQVQFVDPEAAAQWQVVNQSRTVTGQE 228 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 E + D++ +TG L S P P AV + + + L+ L++ GI Sbjct: 229 PEWIEVQRDLIRP---ILRVTGQLRVGSTPEPAFVAVLEPSRHFLTKLQAALRKQGIKVD 285 Query: 272 GTLLRQTQVNEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV--PG 327 +++ + + + +A S PL +++ + S+N+ A+ + + P Sbjct: 286 QAIVQASPSEDKQNLYRIAHLSSPPLAEVIATTNQDSNNLYAEALLESLLAQAGGTVSPP 345 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T A + Q GVD + DGSGLSR NL+ P +++Q+L+ + F Sbjct: 346 TPEADPLTILQSTLATVGVDPQAYQLQDGSGLSRRNLVTPTSLIQLLEGMHAFPQADIFR 405 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 + L +AG G+L R L GK+ KTG+L V +L+G++ + F ++ Sbjct: 406 ASLAVAGQTGTLAQR--LRGTVGAGKLQGKTGTLSAVVSLSGYLNPPRFSPLVFSVLVNQ 463 Query: 448 YAVEPADQRNRRIPLV 463 V + R LV Sbjct: 464 TGVANSQVRQAIDELV 479 >UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3M3_SALRD Length = 477 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 119/474 (25%), Positives = 194/474 (40%), Gaps = 32/474 (6%) Query: 7 IIGLTSCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 ++ L + A +D + + A A + + + + + + + LPAS QK Sbjct: 15 VVSLPTEALAQPLPARIDSLLQERRAAHAFWGVSIYDLEGDSLLYERNGDRGFLPASNQK 74 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR------NM 119 + T AAL LGP+ R+ TTL G + V++GDL DPT + N Sbjct: 75 LFTTAAALDLLGPEHRYETTLSFDGTTRDSVMRGDLRLVGSGDPTFGSTALERTDPLRNW 134 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM----TQCFSAPPAAAIVDRNCFS 175 L + GV +I+G ++ D F + GW + + Q N Sbjct: 135 AERLAEMGVRRIEGRLIGDDQAFLNGFYPDGWSVSYLTRQKGQQMGVRAGGLSYRDNTVP 194 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 V++ A PG +R+ +++ ++ T R NR LTG + Sbjct: 195 VTVR-ATTPGTPPEVRIQPEGVLSVKNEAVTSERWRGSTLLINRTF---STNRIVLTGSV 250 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP---GTVVASKQS 292 RS V D ++ I ++ L+ AGI L+ V+ P G + S Sbjct: 251 -ARSYGGVRNVPVSDPTAFTLRIFRERLQDAGIETDLELVNAEAVDAPSGGGKPLFVYVS 309 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L +++ + K+S+N A+ V R G G+ R G LR +AG++ Sbjct: 310 PLLSEIVTEINKRSNNFYAEQVLRTYGWG-----GSTRGGIQRTESFLR-RAGINTRPLS 363 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-YDGSLQYRAGLHQAGVD 411 + DGSGLSR NL+ P + +L ++ H F + +P G + +L+ R G Q Sbjct: 364 LNDGSGLSRKNLVTPRALQALLAHMNDHAAGDVFRASIPRGGERNTTLRTRLGRTQ---- 419 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 V AKTGSL V L+G+ G R+AF + + Y + +VR Sbjct: 420 --VRAKTGSLAFVRGLSGYAERPDGGRVAFALFANNYTGPSYQITHTMDDIVRL 471 >UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XIE9_SYNP2 Length = 479 Score = 347 bits (891), Expect = 5e-94, Method: Composition-based stats. Identities = 99/459 (21%), Positives = 195/459 (42%), Gaps = 30/459 (6%) Query: 9 GLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQMALPAST 63 + +A S + ++ I+Q+ + +Q + ++ + +PAS Sbjct: 23 FSSQSLAQSQETCDLSGTISQILQRPEQQQTQWGIAIQDPQTDSLLFEHRADTFFVPASN 82 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 QK++T AAL+ GP++++ T + T G N L+ R DP+L + + ++ L Sbjct: 83 QKLLTTAAALVSFGPNYQYQTPIYTVGTAPNLEK---LIIRGVGDPSLTTEKLTTALSQL 139 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP- 182 + ++ ID V++D+S F P W W+D++ + P + +++ N ++++ Sbjct: 140 SQQQIHHIDQ-VILDSSHFPEPGVNPTWEWSDLSFYYGVPVTSLMLNENAVVLTVFPTES 198 Query: 183 -KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + + + + + +Q+ T P + Y TLTG L + P Sbjct: 199 GQTTTVGWSDDIAAQQWQLENQMVTAP---DDTPYSGSLTQTYGTTTLTLTGKLAADAMP 255 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHDLL 299 ++ D YA + L + GIT +L QT + + + + S PL ++L Sbjct: 256 DIWGLSIPDPDRYALDKITQILGEQGITVGKSLTTQTPIPNLDQAQPLGAIASDPLAEIL 315 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 K + S+N+ A+++ + + A + + + + GVD + DGSGL Sbjct: 316 KTTNQDSNNLFAESLLKTLTAADRDP------------ETILESIGVDPATYRLRDGSGL 363 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SRHNL+ P ++Q L + H + + L +AG G+LQ R V+ + KTG Sbjct: 364 SRHNLVTPMALIQTLDGMLTHPQGETYRNSLAIAGRTGTLQNR--FQDTPVENQFFGKTG 421 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 ++ V L+G++ + + R Sbjct: 422 TMTHVSALSGYLDLPDDSTLLVSILANQTGQSARITRQA 460 >UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESX9_AMOA5 Length = 532 Score = 346 bits (889), Expect = 7e-94, Method: Composition-based stats. Identities = 112/484 (23%), Positives = 195/484 (40%), Gaps = 54/484 (11%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + A+++L + +PAS+ K+ T AL LG DF+F T L+ Sbjct: 44 ESVLKNASVSLYAVNTATREVIHSINPHISLVPASSLKLFTTATALEILGEDFKFQTRLQ 103 Query: 88 TKGNVE-NGVLKGDLVARFGADPTLKRQDIRN----------MVATLKKSGVNQIDGNVL 136 G V+ G L+G+L DPTL + R + T+K G+ +I+G V+ Sbjct: 104 YNGEVDKRGTLRGNLYILGEGDPTLGSKMFREYYYDPYFIETWINTIKAKGIKRINGAVI 163 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA-PKPGDMAFIRVASY 195 DT + W D+ + A + + N + + + ++++ Sbjct: 164 GDTKTLEDYTAPDTWVVEDLGNEYGAVYSELSIFDNKYEMLFMPRLIDETKLDIVQISPQ 223 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 P + + L R + Q+C + +P R + G +PQ L + ++ D A +A Sbjct: 224 IPEEVKI-INRLQRVGDKYQFC-IYGMPYKNTRI-IKGAIPQDKLTLVVKASIPDPAYWA 280 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNE--------------------------------- 282 L++EL++ GI + E Sbjct: 281 AYTLRNELEKNGIKVKKGPTTTRRKQELHLHKGNLEPEIRQVKRQQEGKYQKSKRNVKKD 340 Query: 283 --PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 P + + S PL D++ I ++S+N+ A+ + IG T G A Sbjct: 341 ETPRVDLYTNYSPPLKDIVVITNRESNNLYAEHIINQIGLHIAGKEDT-ENGIKAAIDFW 399 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQ 400 AG+D + DGSGLSR+N I ++ +L Y+ N F LP+AG G+L+ Sbjct: 400 CA-AGIDTTGIFLHDGSGLSRYNSITTKQLVDILCYMKNSKNFDAFYHSLPIAGETGTLK 458 Query: 401 YRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 +A + G + AKTG ++ V + G+ TT SG +AF ++ Y P + + + Sbjct: 459 E--LFTKAPLKGNLKAKTGGMKRVLSYTGYCTTISGTEIAFSLIVNNYNGTPKELKQQIE 516 Query: 461 PLVR 464 L+ Sbjct: 517 KLLT 520 >UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax=Actinomycetales RepID=D2AVR4_STRRD Length = 516 Score = 346 bits (889), Expect = 9e-94, Method: Composition-based stats. Identities = 120/468 (25%), Positives = 201/468 (42%), Gaps = 29/468 (6%) Query: 20 AANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 ++D+ ++ A ++V+ + S ++ PAS K++T+ AA LG Sbjct: 39 VKDIDQILSDARLTPARAGVVVKSAASGEELYAQDSGKVLTPASNAKLVTSAAAADTLGL 98 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLID 138 DFRFTT++ + G L G+L + DPTL D + A + SG+ + G ++ D Sbjct: 99 DFRFTTSVLSTGRRAGSALTGNLYLKGTGDPTLLAADYDALAARVAASGIKMVTGKLVAD 158 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAI------VDRNCFSVSLYSAPKPGDMAFIRV 192 + F S W W+D ++A +A D VS+ G A + Sbjct: 159 DTWFDSVRLGTDWAWDDEPYYYAAQISALTASPDTDYDAGTVIVSVAPGDAAGKPAKVST 218 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 ++ + R + A+ L N +TG + + AV D Sbjct: 219 TPETDY-----LKIVNRATTGAETDVLIERQHSTNTVLITGTVADGYDE---WVAVDDPT 270 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 YA ++ + L + G+ G R+ VAS+ S PL +LL +K S+NM A+ Sbjct: 271 GYAASLFRKALAKHGVRVLGPTARE-ATPAGAATVASRDSMPLSELLVPFMKLSNNMHAE 329 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 + + IG GTW AG ++ Q G+ + DGSGLSR + + P + Sbjct: 330 ILTKSIGRKVSGA-GTWSAGLASLTSF-AQANGMPT--LRMRDGSGLSRADGLTPGGVTG 385 Query: 373 VLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 +L + + LP+AG G+L+ R + G V AKTGSL GV +L Sbjct: 386 LLLALRSKPWFSTWYGSLPIAGDPDRMVGGTLRSR--MRGTPAAGNVHAKTGSLTGVTSL 443 Query: 428 AGFITTASGQRMAFVQYLSGY-AVEPADQRNR-RIPLVRFESRLYKDI 473 +G++T+A + + F L+ + + P D ++ I L +F D+ Sbjct: 444 SGYVTSADNEPLVFSVMLNQFLSGSPKDIEDKIAIRLAQFSRTAPADV 491 >UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA56_ACIC5 Length = 518 Score = 346 bits (888), Expect = 1e-93, Method: Composition-based stats. Identities = 113/494 (22%), Positives = 199/494 (40%), Gaps = 73/494 (14%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 A+ + V + A AP ++ Q+ PAS K+ T A L + PD R+ T + T G V Sbjct: 28 QAHWGINVTTL-AGAPVYSLNNAQLFHPASNAKLFTTAAVLGLMSPDARWRTQVVTSGQV 86 Query: 93 E-NGVLKGDLVARFGADPTLKRQ----------------DIRNMVATLKKSGVNQIDGNV 135 + G L GDL+ DPTL + + M + K G+++I+G++ Sbjct: 87 DAKGTLHGDLILLGSGDPTLSGRVYPYGGHTERASDTLAALEQMADEVVKDGIHRIEGDI 146 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA------- 188 + + + F GW +D+T + AP +A ++ N +++ + + Sbjct: 147 IGNDTWFTWQPYGAGWAQDDLTWDYGAPISALTLNDNVAYLNIVPQQEAAQLPNEPGAHP 206 Query: 189 ----------FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 P + L R + + + + + G + Sbjct: 207 EKLVTPTGTELAEWNPPTPYYYLNNESNLTRATRSYAGIDRRL---GSHTVRVFGNIDAH 263 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT------------- 285 L +A A+ D A YA D L++ G+ G + Q++ T Sbjct: 264 --GLHVALAIGDPAQYAAQTFADLLRERGVQIDGMARAEHQLSTDTTHFRTESELPIPLH 321 Query: 286 ---------------VVASKQS-APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 V+AS S A L +++ LK S N+ A+ R +G G++ Sbjct: 322 RIPDTVLGPPSGNMHVLASWLSHATLAQDVEVTLKVSQNLHAELYLRDLGRYEAG-EGSF 380 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G+ +RQ + AGV G+ DGSG+S +++ P + +L Y A + Sbjct: 381 AEGARVIRQF-AEDAGVKPGDFFFYDGSGMSHQDVVTPRALTTMLAYAAHQPWGKLYRES 439 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 LP+ G DG+L R G+ +V AKTG+L V +L+G++ T SG+ + F + + Sbjct: 440 LPVGGVDGTLSDR--FVSPGMRNRVDAKTGTLSEVNSLSGYVRTRSGRTLVFSILCNAHH 497 Query: 450 VEPADQRNRRIPLV 463 ++R +V Sbjct: 498 PGSYEERAVMDRIV 511 >UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERE3_OCEIH Length = 459 Score = 346 bits (887), Expect = 1e-93, Method: Composition-based stats. Identities = 110/424 (25%), Positives = 183/424 (43%), Gaps = 16/424 (3%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 AG L L V+ ++ PAS K++TA+AAL LGP +RFTT + +G Sbjct: 18 AGGILGLSVRSADTGDIYFSHNGDIRLHPASNMKILTAVAALKILGPGYRFTTEIRLEGK 77 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + V +GD+ DPTL+ D + L K G+ +I G+++ D + + + Sbjct: 78 LVGDVWEGDVYIVGKGDPTLQLNDYQRFATILHKYGIRKITGSIIADDTWYDDIRLSEDL 137 Query: 152 PWNDMTQCFSAPPAAAIV--DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 W+D + A +A + D++ + S+ KPG + YP T + + Sbjct: 138 IWSDAQYYYGAEVSALTLSPDKDYDTGSVKIIIKPGQLGDPPEYQLYPNTSYVMIENHAV 197 Query: 210 GSAEAQYCELDVVP-GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGI 268 A+ EL + + NR + G + + AV Y L + GI Sbjct: 198 TVDHAEEEELCITREHNGNRIYIKGKIGINQDIRKEWMAVWGVTDYVVNTFVQALNETGI 257 Query: 269 TWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT 328 T V + S L ++L +K S+N I + + + +G + GT Sbjct: 258 TIKDKSKTGRSVPSGTACIHVHSSPTLAEILIPFMKLSNNGIGEMLVKEMGRFVY-EEGT 316 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 W AG +++ + Q GV++ I DGSG+S +NL+ + +L I + + Sbjct: 317 WEAGLKVMKEQI-QSYGVNMKTLQIKDGSGISHNNLLPANELTHLLHCIQTEEWFPLLLD 375 Query: 389 MLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 LPLAG G+L+ R V AKTG+++GV L+G+I + QR+ F Sbjct: 376 TLPLAGEQNRMVGGTLRERMKGLS------VKAKTGTIEGVSTLSGYIKMETDQRVIFSI 429 Query: 444 YLSG 447 L+ Sbjct: 430 LLNN 433 >UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5P5_GEMAT Length = 545 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 105/463 (22%), Positives = 198/463 (42%), Gaps = 23/463 (4%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 T+ +++ + + +V + + +PAST K+ T+ Sbjct: 84 TTPRGTEALTSDLSTLLGSRTRNGDWGAIVVSISRGDTLFARGADAPMVPASTMKLFTSA 143 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIR-------NMVAT 122 A +LGP+ F+T + G V+ NGVL GDLV R DP+L + +R N++A Sbjct: 144 IAFEKLGPEHTFSTDVLRDGTVDANGVLSGDLVLRGDGDPSLSPRFVRGGPDASMNLLAQ 203 Query: 123 LKK-SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 +G+ ++ G+++ D S F S GW ++AP +A ++ N V + Sbjct: 204 FTAGTGIKRVTGDIIADASAFESRRIPEGWLSRYAGAGYAAPFSALSLNENIVIVGVTPG 263 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + +T+ + VRT+ G + +R ++G + R+ Sbjct: 264 GSGDGAKVFLEPATQALTITNTVRTVAGGG-----SRITARRVGDDRVVVSGTIGARAGT 318 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + V D +++ + L+ G+ G + + + TVV S S PL L+ + Sbjct: 319 VRYQLVVGDPSTFTAGAFRAALEAQGVKVDGA-TKAGRTSSTATVVTSLPSPPLARLVSV 377 Query: 302 MLKKSDNMIADTVFRMIGH-ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M ++S N+ A+ ++R A G+ + ++ + +Q G DGSGLS Sbjct: 378 MNRESINLYAEMLYRNAARGADKTTVGSAETAATVLKDFMVRQVGAAPDAVTATDGSGLS 437 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 + + P +++Q+L + F + LP+AG L+ R + G + AKTG+ Sbjct: 438 VLDRVTPRSLVQLLDHAHHAQWGSAFHASLPVAGESELLRNR--MRATPAQGNLHAKTGT 495 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V L+G++T +G+ +AF +G D+ + R + Sbjct: 496 TNDVIGLSGYVTAENGEILAFAFLYNG-----KDRWHARETID 533 >UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family n=6 Tax=Burkholderiaceae RepID=Q0KE47_RALEH Length = 533 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 112/452 (24%), Positives = 198/452 (43%), Gaps = 17/452 (3%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 G+ + +A +++ A V + + V ++GA +++QQ PAST K++ Sbjct: 77 AGVPTPVAAALRRAGVPA--------SAASFYVVRLGAGTARASWNAQQPMNPASTMKLV 128 Query: 68 TALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 T A L LGPD+R+ T+L +G + G++ R DP L +++ +VA + Sbjct: 129 TTFAGLQLLGPDYRWQTSLYADAQPGFDGTVNGNVYLRGHGDPKLVPEEMAKLVAKARAG 188 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G I+G++++D S FA G ++ + ++ P A + S +L P Sbjct: 189 GATGINGDLVLDRSYFADGLDGNGTIDGEVQRAYNVGPDALLYAFKTLSFTLTPDPASQT 248 Query: 187 MAFIRVASYYPVTMFSQVR-TLPRGSAEAQYCELDVVPGDLNRF--TLTGCLPQRSEPLP 243 +A + + +++ T R V+P + +G Sbjct: 249 VAVSVTPELAQLKLDNRLTLTNGRCGDWQSSASPSVLPQADGTVLASFSGDYASDCGEHV 308 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 L A A + E ++AG ++ LR +V ++A PL D+++ + Sbjct: 309 LNIATLSHAEFTWGGFVAEWQRAGGRFAHMPALRSGKVPRGAVLLARHYGLPLADIVRDI 368 Query: 303 LKKSDNMIADTVFRMIGHA-RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 K S+N++A +F IG P + V++ L +Q G+D+ ++ +GSGLSR Sbjct: 369 NKFSNNVMARQLFLTIGAEMDRGGPASTGRSIRVVQRWLARQ-GLDMPGLVLDNGSGLSR 427 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 I+ M ++LQ A + I LP+ G DG+L+ R L +A G KTG+L Sbjct: 428 EERISAYDMARLLQQAAASNVGPVLIDSLPVLGVDGTLRNR--LTRANAAGNGYLKTGTL 485 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 V LAG++ A G R V ++ A Sbjct: 486 ADVRALAGYVDAADGGRYVVVSMINHPNAAQA 517 >UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6G5_NITMU Length = 548 Score = 345 bits (884), Expect = 3e-93, Method: Composition-based stats. Identities = 107/490 (21%), Positives = 199/490 (40%), Gaps = 57/490 (11%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 + L + +++ A + + + + V + GA P + ++ PAS K Sbjct: 55 LALDLPDSVKYALARAGIPR--------SAVGIYVHETGAGQPLLAVNAGVGMSPASVMK 106 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 ++T A L LGP + + T L G V L G+LV + DP L ++ + L++ Sbjct: 107 LLTTFAGLELLGPGYAWKTELYADGIVRGDALHGNLVIKGYGDPRLNLENFWLLTRRLRQ 166 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG 185 +G+ +I G++++D+S F + ++ P A +V+ ++ L P+ Sbjct: 167 TGLREITGDLVLDSSHFDLPGSDSAAFDGRPYRAYNVLPEALMVNYRTLALRLLPQPESR 226 Query: 186 DMAFIRVASYYPVTMFSQVRTLPRGSAEAQY----CELDVVPGDLNRFTLT--GCLPQRS 239 + + V P TL G+ ++ G +R ++T G Sbjct: 227 SVRIV-VDPLLPSLDLKNSLTLTNGACNDWKDDLGTDIQFATGLDSRVSVTFKGSYALAC 285 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 L +V D A Y + + +Q G G++ R++ E + + QS PL D++ Sbjct: 286 GEKTLFLSVHDTARYTFDLFRQLWEQQGGVLRGSV-RRSAAPEGIVPLETHQSPPLTDIV 344 Query: 300 KIMLKKSDNMIADTVFRMIGHARF------------------------------------ 323 + + K S+N A ++ +G Sbjct: 345 RDINKFSNNTAARQLYLTLGLGSGPFREPQVMPASFNIGYGNDRTAKSGTILSLDGIGED 404 Query: 324 --NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 T A+RQ L + V I+ +GSGLSR+ I+ M ++L Q Sbjct: 405 PDPSRATLAKSETAIRQWLASRQLV-FPELILENGSGLSRNERISAGHMGKLLLAAFQSH 463 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 F+S LP+ DG+++ R L+++ + G+ KTG L+GV +AG++ SG+R Sbjct: 464 VMPEFVSSLPIVAVDGTMKKR--LNRSAIAGQAHIKTGLLEGVKTIAGYVRDKSGRRSVV 521 Query: 442 VQYLSGYAVE 451 V +++ E Sbjct: 522 VFFINHPRAE 531 >UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Microcystis aeruginosa RepID=B0JUK1_MICAN Length = 474 Score = 344 bits (882), Expect = 5e-93, Method: Composition-based stats. Identities = 115/453 (25%), Positives = 206/453 (45%), Gaps = 32/453 (7%) Query: 14 IAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + A +D + + GA ++V+ + + H PAST K++T AA Sbjct: 42 ICPADLATRIDRILARPDYQGAYWGILVKSLNSQENLYSLHENNFFTPASTAKLLTTAAA 101 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 + D+R T + +GN + L D T+ + + LK G+N I Sbjct: 102 FSKFNRDYRLKTPILAQGNPPDLE---TLTLVGRGDATITTEKLEKFAEKLKAQGINSI- 157 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PKPGDMAFI 190 +L+ S F D W W D+ ++ P ++ +++ N ++ L + D+ + Sbjct: 158 YRLLVVASPFVVSDSQKTWEWEDVFFDYAVPASSLVLNENSVTLKLLPRQLGQSLDLQWS 217 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +Q T +GS + ++ NR +TG L S+ A+ Sbjct: 218 DPIAAKQWLIENQTSTAAQGSPNTLAIKGNLA---NNRLIITGSLAIDSQD-DFNLAIPQ 273 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 + Y A ++ L++AGIT + + G + + +S PL L++ + K SDN++ Sbjct: 274 PSEYFLARWRNILEKAGITVKNAEISSQIL---GHEITNLESEPLAYLVEKVNKNSDNLL 330 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+T+ +M+G G +++ L + G+D + I DGSGLSR NLI P T+ Sbjct: 331 AETLLQMLG------------GVSGLQETL-TKLGIDSDSYKIGDGSGLSRQNLIKPKTL 377 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 Q+LQ +A++ ++ L + G DG+L R Q ++G++ AKTG+L GV LAG+ Sbjct: 378 GQILQLMAENP---DYRRSLAIGGVDGTLTNR--FRQTPLEGRLQAKTGTLTGVIALAGY 432 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + TA Q + F ++ RN ++ Sbjct: 433 LATADNQPLIFSITVNNSDQPATTLRNGIDEVI 465 >UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FLH3_SACEN Length = 512 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 122/453 (26%), Positives = 197/453 (43%), Gaps = 22/453 (4%) Query: 21 ANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 ++D+ + G++ ++V+ + A PAS K++TA AAL LGPD Sbjct: 24 VDLDKILADPRLDGSHAGVVVRDPETDEVLYSSQADARATPASNAKLLTAAAALEALGPD 83 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 +RF T + T G VL+GDL R DPT+ D + A + +SGV ++ G + D Sbjct: 84 YRFRTDVLTDGQQRGPVLQGDLFLRGTGDPTMLAADYDRLAAQVAESGVREVKGKLRTDA 143 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN------CFSVSLYSAPKPGDMAFIRVA 193 F GW W+D ++AP +A V N V + Sbjct: 144 GAFDDVPLGSGWAWDDEPYYYAAPISALTVAPNTDFDAGTALVRATPGAEGEPAEVALEP 203 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 + + + ++ T GSA A E + NR ++G +P + V D A+ Sbjct: 204 ATAVLEIDNRTTTSAPGSAPALSVERE---HGGNRVVVSGSVPAGGPVVEDFSTVPDPAA 260 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 YAG + L G+ G + + E +A + S PL DLL +K S+N A+ Sbjct: 261 YAGDVFARALAAHGVQVGG--VAPGRTPEGARSLAGRDSMPLRDLLVPFMKLSNNGHAEV 318 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + + +G + GTW G + + + L GVD + DGSGLS + + P + + Sbjct: 319 LVKAMGR-QATGTGTWGGGIEVLNEKLNG-LGVDSKVMRMVDGSGLSTMDAVTPRQLALL 376 Query: 374 LQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 L Q + LP+AG G+L+ R + V AKTGSL GV +L+ Sbjct: 377 LDNARQRPWFQVWYDSLPVAGNADRMVGGTLRSR--MVGTPGQDNVHAKTGSLTGVTSLS 434 Query: 429 GFITTASGQRMAFVQYLSGY-AVEPADQRNRRI 460 G++T A+G+ + F + + + P D + Sbjct: 435 GYVTAANGRPLVFSVVFNDFVSSSPKDLEDAIA 467 >UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NB4_SHEDO Length = 560 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 135/470 (28%), Positives = 222/470 (47%), Gaps = 36/470 (7%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 + LA+ + + ++Q++ PAS K+ TA+ A+ +LG D+R+ + + KG + Sbjct: 89 SQLAIAIWDPQQQRSLFELNTQKLMQPASVMKLFTAVTAIAELGHDYRYRSQVFIKGPII 148 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 N L+GD+ DP L QD+ ++A K +G+ +I+G V + T+ +APGW W Sbjct: 149 NKALEGDVWINLSGDPKLTTQDLSRLIAQFKYAGIEKINGQVQLLTTA-NEQVRAPGWVW 207 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVASYYPVTMFSQVRTLPRGSA 212 +D+ C++AP + I+D NC L + + +++ P+ +F+Q R +P S Sbjct: 208 DDLGICYAAPVSRLILDGNCILAKLIPSQNGIKGETRLSISTSSPIKVFNQARFIPTSSN 267 Query: 213 EAQY--CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 + C+L + D N++ L+GC P + LA AV D Y A L+ KQ I Sbjct: 268 KQSRDLCQLSLARFDNNQYKLSGCYPSD-GGINLAIAVNDVEPYMLAKLEALFKQHQIVL 326 Query: 271 SGTLLRQT-----------------------QVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 + T +E ++AS S L +L MLK S+ Sbjct: 327 KHAINLLTDDDSALSAQFNEASSSKDEPSLVSDDEELRLIASHSSESLMAMLDTMLKDSN 386 Query: 308 NMIADTVFRMIGHARFNV-----PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 N+IAD VF+ IG + + + S A L + G+ + + + DGSGLSR+ Sbjct: 387 NLIADRVFKTIGRSFYQTTHPQVSDNFTHASKAQLARLNE-MGIKLDSANLVDGSGLSRY 445 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 N I+ A +M +++ I + + S LP AG G+L Y+ G Q + KV AKTG++ Sbjct: 446 NAISAAQLMSLIKLIYSDERFTSLDSALPEAGVSGTLAYKRGF-QTKLRAKVKAKTGTML 504 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKD 472 GV N AG + T+ G FV +G Q L+ +Y+ Sbjct: 505 GVANFAGRMQTSQGDLY-FVILENGINPHQQAQHQVSSELLTAIMAIYET 553 >UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWZ8_LEPCP Length = 474 Score = 343 bits (881), Expect = 7e-93, Method: Composition-based stats. Identities = 115/437 (26%), Positives = 190/437 (43%), Gaps = 13/437 (2%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 QLPA + L + G + + + Q+A PAS K++T+ AAL QLG F++ TTL Sbjct: 41 AQLPADSLY-LWIAPAGGGEARLSHQAGQLAHPASLMKLVTSAAALQQLGRSFQWHTTLH 99 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 G GVL G L + G DP L + + ++ +++ G+++I G++++D S +A + Sbjct: 100 LDGTPRQGVLAGSLHIKGGGDPKLVPERLWLLLRQVQQLGIDEIRGDIVLDRSAYALPEI 159 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 P + + ++ P A +V+ ++ P G + + T VR L Sbjct: 160 DPAAFDGEPLKPYNVRPDALLVNYKSITLGFRPDPARGVASVSAEPALAGWTPPDSVR-L 218 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 G L R+ LTG P A + ASYA +++ + + G Sbjct: 219 SDGPCNDWRAGLQADFSSPQRWRLTGSYPLACGERNWPIAYNEPASYAARVIEAQWRALG 278 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 G + R+ V A+ S PL ++++ M S+N IA + + +P Sbjct: 279 GRLQGRV-REGLVPAGLPETAAFLSPPLAEVMRDMNLHSNNQIAQQMLLALSP---QLPA 334 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T+ A V +L G D + +GSGLSR I P + + LQ+ + + + Sbjct: 335 TFEAARQPVANLLGA-VGCDSAELRLDNGSGLSRDERITPRCLGRWLQWSWRQPWMPDLL 393 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LPLAG +G+ + V G+ KTGSL V +AG + A GQR V L+ Sbjct: 394 GSLPLAG-EGTAR-----RAFSVAGRAHLKTGSLANVAAIAGVVHGADGQRQVVVAMLNH 447 Query: 448 YAVEPADQRNRRIPLVR 464 R ++R Sbjct: 448 PQASRDGARQVLDAVLR 464 >UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55728_SYNY3 Length = 486 Score = 343 bits (880), Expect = 9e-93, Method: Composition-based stats. Identities = 111/478 (23%), Positives = 198/478 (41%), Gaps = 33/478 (6%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQLPAG--------ANLALMVQKVGASAPAIDYHSQ 55 F + LT+ + V + +L + A + +Q + S P Y + Sbjct: 24 GIFYLCLTTGVGAQADRLCVGDLQQKLESHLQQPELSRAQWGIAIQPLTDSQPIYQYQAD 83 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + +PAS QK+IT AL +LGP+FRFTT + + + + DP+ D Sbjct: 84 RFFIPASNQKLITTAMALQELGPNFRFTTQVYQRDGGKK------VQVISSGDPSFDVDD 137 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + + LK GV I+ L+DT I + P W W+D+ ++ P AI+ N Sbjct: 138 LTAIAKGLKDRGVTAIEELELVDT-IAPQDYQRPSWEWDDLHYGYAPPVNGAILTGNQVI 196 Query: 176 VSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 ++L +P + + + +Q T Q ++ + +TG Sbjct: 197 LTLTPQNLGEPLTPTWSDPIAGAQWQIINQTETAVDPHQPPQVQQI----FGQRQLVITG 252 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 LP E + AV D Y A L+ +L + GI+ S +++ + + S Sbjct: 253 GLPPAGETRSITLAVADPQQYFLASLQQKLAEQGISVSTSIVSANTKAIAPAPLLALTSP 312 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL L+K + + S+N+ A+ + I P V ++ G+ + Sbjct: 313 PLWTLIKTVNQDSNNLYAEALLNAI-----QPPSQATDWQSYV-----ERLGLATTTVRL 362 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DGSGLSR +L+ P ++Q+L Q + L +AG G+L+ + GK Sbjct: 363 RDGSGLSRQDLVTPQALVQLLINQTQKSTGTIYQQSLAVAGRSGTLER--SFADTPLVGK 420 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 + KTG+L GV +L G++ +AF ++ + + R +V + +++ K Sbjct: 421 MRGKTGTLTGVVSLTGYVENQQWGTVAFSFMVNNSDLGASVLREAMKQMVLWTAQVEK 478 >UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB97_GEMAT Length = 545 Score = 343 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 106/463 (22%), Positives = 194/463 (41%), Gaps = 37/463 (7%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 A +++ + + + + ++ +PAS QK++TA AL LGPDFR+ T + G Sbjct: 77 NARWGILLVDAERNDTILSHDADRLFMPASNQKLLTAAIALQHLGPDFRWRTPVLLDGTQ 136 Query: 93 ENGVLKGDLVARFGADPTLK--------RQDIRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 V GDL+ + DP++ ++ TL+ G+ +I G VL Sbjct: 137 RGSVFHGDLLVQGSGDPSISDALRGGRASSAFDAILDTLQARGIKRITGRVLPWGDALPG 196 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV 204 GW W+D +SA + + + + K G +R A ++ Sbjct: 197 ATTGFGWAWDDFDAGYSAAIDELTYNEGELYLHIVAGSKIGSPVTVRRAPTERYPAV-RI 255 Query: 205 RTLPRGSAEAQYCELDVVPGDL--------NRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 + R +A + + P L ++ ++G + Q + + A + + Sbjct: 256 EAITRDTATSAVSAIAPRPMPLSVVYDSIGHQVVVSGTMSQG-DSTRVTLAYRHPSDAFL 314 Query: 257 AILKDELKQAGITWSGTLLRQTQVNEPGTV---------------VASKQSAPLHDLLKI 301 A L D L+ I+ G ++ + + PG V + +S D+L+ Sbjct: 315 AALGDALRARKISVQGGVIARPAPHGPGRVASRSTKRAVAHAIDTLGVIESVSFADVLRR 374 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 MLK S N +A+ +FR G+ G+ + + L G+ + DGSGLSR Sbjct: 375 MLKPSQNQMAELIFRTSGYVASG-DGSLDSARAVGTRTL-AGWGITGQDVAYRDGSGLSR 432 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 H+ + P +++VL + + F LP+AG DG++ R + G AKTG+L Sbjct: 433 HDYLTPRAVVRVLDAMHRSPWYAVFRDGLPIAGVDGTIANR--MKDTPAQGNARAKTGTL 490 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 L+G++T++ G+ + F + ++V + + LVR Sbjct: 491 DKARALSGYVTSSDGRLLFFSLLCNNFSVPTREVERVQDLLVR 533 >UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIK8_NATMA Length = 457 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 114/428 (26%), Positives = 186/428 (43%), Gaps = 19/428 (4%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 + ++ + P + + LPAS K++TA A +LGP +RF TTL G ++ Sbjct: 33 SASVYAADLRTGEPIVAANPNIPLLPASNTKLVTAARAFDELGPAYRFETTLHADGPIQE 92 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 G L GDLV L + D+ + + +G++ + G ++ID S F PGW W+ Sbjct: 93 GHLLGDLVLTGYGAADLSQGDLLALAEDIADAGIDTVAGELVIDASAFDRQSLGPGWTWD 152 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D + A ++RN +++ + G + + V + S V T P E Sbjct: 153 DGQFEYGAKSTPLALERNTVDITVSH--RNGSVTVDASPTSEIVRIESDVTTGPTEQLEV 210 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG-T 273 V + G +P E A V D +AG++L+ L+ G+T G T Sbjct: 211 YKKRASEV------IRVEGQIPPG-ETTVEASPVDDPMMHAGSLLRQALESTGVTIDGWT 263 Query: 274 LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 + V+ G A+ +S+PL ++ ML SDN +A+ + R + G+W A Sbjct: 264 RIEHDPVDTDGPPCAAVESSPLSAQVRTMLVTSDNFVAEQLARTVALELDG-EGSWNAWE 322 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 V L + + DGSGLSR+NL++ + + VL++ + LPLA Sbjct: 323 THVNDFLEARG---ADAAHLRDGSGLSRYNLLSASGIAAVLEWSLDQPWGDRYRRSLPLA 379 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEP 452 G +G++ R V AKTG+L GV L+G++ + + F LS E Sbjct: 380 GVEGTVSNRLEDAPLP----VRAKTGTLTGVRTLSGYVENRENEPEIVFSCLLSNLTGEH 435 Query: 453 ADQRNRRI 460 RI Sbjct: 436 EATATDRI 443 >UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIC0_BDEBA Length = 436 Score = 341 bits (876), Expect = 3e-92, Method: Composition-based stats. Identities = 101/411 (24%), Positives = 190/411 (46%), Gaps = 7/411 (1%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 +D + +M +PAS K+ TA A L P +F T L T G++++G LKG L + G Sbjct: 19 KTLLDVNGNKMMVPASISKIATASAVLASFPPGTKFKTQLLTSGDLKSGTLKGTLYLKGG 78 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP+ +++ +V ++ + +I+G++++D S+F + + + AP A Sbjct: 79 GDPSFVSENMWYLVNAFTRTKIKKIEGDIVVDDSLFDRVRYDLSRQKERVDRAYDAPVGA 138 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGD 225 + N ++ A G+ A + + + + ++ +T+ + + Sbjct: 139 MSFNWNSVNI-FVRANGAGNGAEVTIDPENDYIRLVNKAKTVSGSANNLLADRDEDKKFP 197 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 + + G + Q + + + + +AG LK L Q GI +GT+ R E Sbjct: 198 GDVIHVGGSIGQGLKEVVVFKNITQPDLWAGYNLKAFLAQRGIQLTGTI-RNGVTPEKAE 256 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 +VA +S P+ ++ M K S+N +A+ + + +G + T G + + + Q G Sbjct: 257 LVAESESKPIEQMVADMNKFSNNYVAEMLTKNLGAVKKTKGATLADGVLVINEHM-QSLG 315 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAG 404 V + SGLSR N ++ M +VLQ++ + F++ LP+AG DG+L+ R Sbjct: 316 VPAEQYNLQSPSGLSRQNKLSSFAMWKVLQHLRNDFRVQPEFLTSLPIAGVDGTLKKR-- 373 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 + + + V AKTG L GV +LAG+ G+ + F +G E + Sbjct: 374 MKNSPAERWVRAKTGFLTGVVSLAGYAGLEDGRVVTFSFVYNGSTDETKIR 424 >UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYI7_9SPHI Length = 515 Score = 341 bits (875), Expect = 3e-92, Method: Composition-based stats. Identities = 112/460 (24%), Positives = 205/460 (44%), Gaps = 27/460 (5%) Query: 23 VDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 +D+ + + AL VQ V + + + Q AS+ K +T A L LG +++ Sbjct: 58 IDQLNRDAVLRHGSWALSVQDVTSGRQLVQVNPYQTMTVASSLKTVTTSAGLGILGSNYK 117 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKR--------QDIRNMVATLKKSGVNQIDG 133 F T ++ G + GV+ G++ + G DPTL + + +A +KK+G+ +I G Sbjct: 118 FATQIQYDGALNGGVINGNVYIKGGGDPTLGSPLLGYSLDRTMNEWIAAMKKAGIRRIKG 177 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RV 192 ++ID ++F + W W DM ++AP A V N + + L A + + R Sbjct: 178 QLIIDETLFEENVTPSSWIWADMGNYYAAPAGAINVLDNTYKLYLQPANRLNTTPKVLRT 237 Query: 193 ASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 + + P + + ++T G+ + Y + P D R+ + G +P S + A+ D Sbjct: 238 SPWVPRIQFVNHLKTAAAGTGDQAY--IHGAPYDHVRY-INGTIPMGS-TFSIKGALPDP 293 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQT--------QVNEPGTVVASKQSAPLHDLLKIML 303 Y G + +L Q G+ + T ++N T+V + +S L L+K + Sbjct: 294 GFYLGIAFRKKLIQNGLMTNKNKATTTRMMKLDKQRINYRRTLVYTHRSTTLKSLVKWIN 353 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 S N+ A+ V + IG + G+ AG+ A+ Q + + G+ I DGSGL++ N Sbjct: 354 LYSINLYAEAVLKAIGIKQ-QAEGSTAAGAKAITQYWKAK-GLSTSGLYIEDGSGLAQSN 411 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 I + QV + A+ ++ LP+AG G++ R + AKTG + Sbjct: 412 GITAYQLAQVQRLTAKQSYFNDYYQSLPVAGVSGTM--RGLCRGTRAQNNLRAKTGGMTR 469 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V + G+ +GQ +F + Y + + + L+ Sbjct: 470 VISFTGYFKNRAGQLRSFALVANQYTCKYNIIKAKLARLM 509 >UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VD0_CYTH3 Length = 483 Score = 341 bits (874), Expect = 5e-92, Method: Composition-based stats. Identities = 116/485 (23%), Positives = 203/485 (41%), Gaps = 38/485 (7%) Query: 6 FIIGLTSCIAFSV--QAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAST 63 + LTS + V + L A + + ++ + A+ + ++QQ PAS Sbjct: 14 ILFFLTSLVQAQVSWNSQLKPILEDSLLKRAQVGISIRDITANTLVFEKNAQQAFTPASN 73 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI------- 116 K++T AAL LG D+RF T + GN+E G G L + DPTL + Sbjct: 74 LKIVTTAAALELLGSDYRFVTKVLYTGNIEAGNFSGTLYVKGSGDPTLGSDKMTAAGSYQ 133 Query: 117 ---RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 RN V LK G+ GN++ID + F + + W D+ + A ++ N Sbjct: 134 TLVRNWVTALKNKGITAFTGNLVIDPTHFGYNAIPNDYTWGDIGNYYGAGSYGLNINENQ 193 Query: 174 FSVSLYSAPKPGDMAFI--RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 +++ G + I + V+T GS + + Sbjct: 194 NVIAIKPGTSLGSITTILSITPKDTSCVYVNHVKTGAAGSGDQSIVYSSPYNP---FVYI 250 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN-----EPGTV 286 G +P S + ++ D A G +L E+ GI W G + TQ + Sbjct: 251 EGTVPAGS-TYNVKASISDPARLLGQLLTKEMAVQGIQWKGEMRVLTQDDTIPDTTNWIT 309 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 + ++S L ++ S+N+ A+ + + I + + G+ G+ AV++ L+ + GV Sbjct: 310 LLEQRSPRLKEIAVYTNLVSNNLYAECLLKEIAFNKTGI-GSTELGAAAVKKYLK-KIGV 367 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLH 406 D ++ DGSG+S N I+P + +L A+ F+ LP AG +G++ + Sbjct: 368 DTSGLVLRDGSGMSPFNSISPNQLTSLL---AKQQANTVFVGCLPTAGKEGTVAHICKES 424 Query: 407 QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFE 466 GK+ K+G++ G +G++T ASG+ A ++ + +NR I V E Sbjct: 425 G----GKIRVKSGTMNGTTCYSGYVTAASGKVYAVSLMVN-----KHEAKNRTIQRV-LE 474 Query: 467 SRLYK 471 L K Sbjct: 475 KVLLK 479 >UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=23 Tax=Pseudomonadaceae RepID=Q4ZUL8_PSEU2 Length = 488 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 106/417 (25%), Positives = 193/417 (46%), Gaps = 13/417 (3%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 L+L++ + +++ PAST K+IT AAL LGP ++ T T G + NG Sbjct: 48 LSLVMLPLNGPGTPTVFNADVSVNPASTMKLITTYAALEMLGPTHQWKTEFFTDGTLSNG 107 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP-GWPWN 154 VL+G+L + G DP L + + ++ L+ +GV Q+ G++++D S F N Sbjct: 108 VLRGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQVTGDLVLDRSHFVQPQLPVFNDDGN 167 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP--RGSA 212 D + F P A +V+ + + G + + + +QV+ + + Sbjct: 168 DDNKPFLVKPDALMVNLKA--LRFVTRNDDGRILVSVEPPIASIRIDNQVKASASKQCTG 225 Query: 213 EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 + +Y + G +N T+TG L ++ D +YA ++ ++ G T G Sbjct: 226 DVRYNPVTQADGSVN-VTVTGQLGNGCNSQT-YLSLLDHPTYAAGAVRAIWQELGGTIQG 283 Query: 273 TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP--GTWR 330 R + ++A S L ++++ + K S+N +A +F +G N + Sbjct: 284 KD-RVGVLPGNAKLLAKAFSPDLVEVIRDINKFSNNTMAQQLFLSLGEEFRNEADGDDGK 342 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 A +RQ L ++ G+ + ++ +GSGLSR ++ M +LQ + F+S + Sbjct: 343 AAQRVIRQWLAKK-GITAPHLVMENGSGLSRAERVSAREMAVILQAAWRSPYAAEFMSSM 401 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 PLAG DG+++ R L + + G+ KTG+L V +AGF ++G A V L+ Sbjct: 402 PLAGLDGTMRKR--LKRTPLLGEAHIKTGTLNTVRAIAGFSRDSNGNTWAVVAILND 456 >UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5 Tax=Bordetella RepID=Q2KWB6_BORA1 Length = 483 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 106/443 (23%), Positives = 196/443 (44%), Gaps = 17/443 (3%) Query: 18 VQAANVDEYI------TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 Q A + + T+LP A L+++VQ+V + ++Q PAS K++T Sbjct: 31 AQVAGLPPKLMQAWKATKLPDEA-LSVVVQEVN-GPRMLAINAQTPRNPASVMKLVTTWV 88 Query: 72 ALIQLGPDFRFTTTLETKGNVE---NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 AL +LGP++ + T T V G L G L R G DP QD+ ++ L+ GV Sbjct: 89 ALSELGPNYSWRTDFLTDPGVRPDAQGRLNGPLYWRAGGDPQFMLQDLWTLLRDLRLRGV 148 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 +I ++++D SIF PG + ++A P A +V + + P Sbjct: 149 KEIS-DLVVDRSIFGQVAIDPGAFDGAPDRAYNASPDALMVGFGALRLLVTPDPVARKWV 207 Query: 189 FIRVASYYPVTMFSQVR-TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 + + ++ T R VV + L+G + L Sbjct: 208 ATVDPPVSGLRLEGAIQWTDARCPGAPAVSTQPVVTQEGVSLRLSGAVAGSCGEFSLYRL 267 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 Y A+ + ++ G T+ G + R V V+AS +S L + ++++ K+S+ Sbjct: 268 ALSQPEYTDAVFRLLWRELGGTFKGKM-RPGVVPGDAIVLASHESPTLGEAIRVINKRSN 326 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++A T+ +G R P T + +Q+L Q G+++ ++ +G+GLSR ++ Sbjct: 327 NVMARTLLLTLGAERGRRPATVASSESVAKQLLSGQ-GLNMPELVLDNGAGLSRDARVSA 385 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ +L + +++ + +AG DG+++ R + G G KTGSL+ V ++ Sbjct: 386 DSLAAMLSLAWRSPVMPEYLASMAIAGVDGTVRRR--MQGKGALGMAHLKTGSLRDVRSI 443 Query: 428 AGFITTASGQRMAFVQYLSGYAV 450 AG++ SG+R V ++ Sbjct: 444 AGYVLGNSGKRYVVVSMVNHENA 466 >UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX09_9GAMM Length = 536 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 120/500 (24%), Positives = 216/500 (43%), Gaps = 47/500 (9%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 +R R ++ C+ + +A + +++++K+G S P + + + P Sbjct: 23 LRHLRMLLLCVICLGVA-RAQAMPLLAPPASTDGRWSVLLEKIGDSHPLVAHRPDALLAP 81 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----- 115 AS K+ + L +LG D R T L +G ++ G L+G LV G DP L + Sbjct: 82 ASVLKLFSTAYILDRLGADARQCTQLRARG-LDQGTLQGPLVFVGGGDPNLSSRRFPYTG 140 Query: 116 -----------IRNMVATLKKSGVNQI-DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 +R + L ++GV ++ DG V +D A PGW +D + AP Sbjct: 141 NSEHEADSLVVLRELAEQLWQAGVRRVPDGIVAVDGPFPAETGSPPGWTEDDQRFWYGAP 200 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 ++ V + A KPG +A +++ + + VRT+ + Q E + Sbjct: 201 IHGLYINDASVLVRVRPAAKPGALATVQITPNPQGFIRNAVRTV----GKRQPTEPVRLV 256 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL--------- 274 D + L+G + S L A D +A L + L++ GI SG + Sbjct: 257 TDTTGWRLSGSVRAGSRTLVAGLAQPDPPRFAAITLAEVLRERGIAVSGDIRVRGLSRNR 316 Query: 275 ---LRQTQVNEPGTVV-------ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 L ++ + E +V+ A S PL + ++++ K S N +T+ R+ A+ Sbjct: 317 DAGLEESGIPEQASVLTHARLLLAEHWSPPLAEEIQVINKVSQNTHIETLTRLADIAQ-G 375 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 GT + + R++ G+ G T D SGLSR + ++ + ++++L + Q Sbjct: 376 RSGTRSSAVAGLETWARER-GLLAGQTRFVDASGLSRDDRLSASDLVRLLNWATQQPWWP 434 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + + LP AG DG+L++R A G + AKTG+L +LAG + Q F Sbjct: 435 EYAASLPEAGSDGTLRHRFRTLDA---GMLLAKTGTLSDAISLAGILYIKPEQAYVFAIL 491 Query: 445 LSGYAVEPADQRNRRIPLVR 464 ++ +++ A R LV+ Sbjct: 492 VNDFSLSRAALRGVLDRLVQ 511 >UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alvinella pompejana epibiont 6C6 RepID=Q6W3N7_9PROT Length = 470 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 106/453 (23%), Positives = 223/453 (49%), Gaps = 13/453 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQA---ANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQ 56 MR ++ L +++S+ ++ I+ +P + + ++ ++ + + +++ + Sbjct: 1 MRRIISVVTLILSLSYSLYGDIPYELEYRISSIPLSKDSYSIYIKGLDSGQEIASWNTYR 60 Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI 116 PAS K++T A ++ LG D+R+ T G ++NG L G+L+ + DPTLK +DI Sbjct: 61 AMKPASVIKLLTTYAGVLGLGFDYRWETKFFHSGYIKNGTLHGNLIIKASGDPTLKSRDI 120 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 ++V ++ G+ +I G+++ID +IF + + ++A P A + + ++ Sbjct: 121 PSIVDNIQSLGIRKILGDIVIDRTIFQVPWQNSSRFDKNRYSPYNAMPDAMMFNERKSTL 180 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR---FTLTG 233 + + + RV + + ++++ + R + D N+ L+G Sbjct: 181 CVTPKGRG--VRLNRVDNDRSYRVVNRLKVVNRSCKSGYSWPKVTIKTDANQRSTIFLSG 238 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 L +R + V LK E+ + GI + GTL + +V++ + S S Sbjct: 239 KLSKRCGTRKICKVVSMPHRAFYYALKSEIGRRGIKFLGTL-KLRRVSKRDRYIFSHFSP 297 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 L ++L I+LK+S+N++A +F IG + P S AV+++L+ + + TII Sbjct: 298 TLEEVLPIILKRSNNLVARQLFLTIGTTYYQPPINTLKASTAVKRLLKHRHILADDYTII 357 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 +GSGLSR + ++ T+ +L+ + ++ L +AG DG+++ R + V G+ Sbjct: 358 QNGSGLSRVSRVSTKTLANLLEDAYFN-YGYRWLDSLSIAGIDGTIRRR--FQNSSVYGR 414 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 KTG+++ V N+AG++ SG++ + ++ Sbjct: 415 AWMKTGTIKSVANIAGYVEGISGEKFVVIVLVN 447 >UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=2 Tax=Actinomycetales RepID=C1YFR4_NOCDA Length = 545 Score = 337 bits (865), Expect = 5e-91, Method: Composition-based stats. Identities = 122/447 (27%), Positives = 192/447 (42%), Gaps = 24/447 (5%) Query: 21 ANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A++D + G + V A S + +PAS K+ TA AAL LG D Sbjct: 61 ADIDALLADPSLEGGVSGVTVTDPATGAVLYSRDSGEQLVPASNMKLFTAAAALDVLGAD 120 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 F+T + +G+ + ++ DL G DPTL QD+ + A + SGV + G+VL D Sbjct: 121 HTFSTEVVAEGHRQRRSVE-DLYLVGGGDPTLSEQDLDALAADVAASGVRTVRGDVLADD 179 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVA 193 + F S W D +SA +A V D V + A Sbjct: 180 TWFDSQRLVDDWWPEDEPYAYSAQISALTVAHGERYDTGVTEVVVTPGAAGAPATVDLGA 239 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 + + +Q T P G + + P N T+TG +P + P+ V + A Sbjct: 240 AEGYAELDNQAVTGPPGGTSSVVVDR---PVGTNTITVTGTIPADAAPVTALRTVDEPAG 296 Query: 254 YAGAILKDELKQAGITWSGTL---LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 AG + L++ G+T G + + +VA +S L ++L +K S+N Sbjct: 297 LAGHLFAQALERHGVTVEGGVEFGEAPGRGRHGARLVADHESPELAEILVPFMKFSNNGH 356 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + + IG G+W AG V + L GVD + ++ DGSGLSR NL+ T+ Sbjct: 357 AEMLVKSIGQEVAG-EGSWDAGLTGVERSL-AGLGVDTSDLVLNDGSGLSRGNLVTSDTV 414 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 + +L + LPLAG G+L++R + G VSAKTG++ G+ Sbjct: 415 VDLLVSTRDASWHGVWADSLPLAGESDPFTGGTLRFR--MGGTAAAGVVSAKTGTMTGIS 472 Query: 426 NLAGFITTASGQR-MAFVQYLSGYAVE 451 L+G++ G +AF +GY Sbjct: 473 ALSGYVAGQGGGDGLAFSVVNNGYGGP 499 >UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WKN5_9SYNE Length = 504 Score = 337 bits (864), Expect = 6e-91, Method: Composition-based stats. Identities = 107/487 (21%), Positives = 202/487 (41%), Gaps = 30/487 (6%) Query: 1 MRFSRFIIGLTSCIAFSVQA---------ANVDEYITQL-----PAGANLALMVQKVGAS 46 +F ++GL + +A QA A++ I + G ++ ++++ + Sbjct: 27 FKFGELVLGLATSLAILAQAEIAFAGVCRADLPGKIDAIADKYTLDGTDIGILIEDLTPD 86 Query: 47 A-PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARF 105 ++Q+ +PAS K++T AAL LGPDF T++ + + DL Sbjct: 87 TRALYARNAQEKLVPASNVKLLTTAAALQALGPDFSIRTSVYGQPDAAIQ----DLYVVG 142 Query: 106 GADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 DPT I + + LK+ GV +++ +D F P W D + A Sbjct: 143 RGDPTFTSYQINLLSSQLKQKGVRRVNSLTAVDN-HFTGPVANPYWDEEDYRAGYGAVAN 201 Query: 166 AAIVDRNCFSVSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 + I++RN + + + + R + + RT+ G+ ++ + P Sbjct: 202 SLILNRNELGFTAIPNGIGQLLSIVWDRPEFVQGWRIENNTRTVGDGN---EFIDAGQKP 258 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 G L + G L + + A+ D SY + L G+ + + T E Sbjct: 259 G-LKVMDVRGQLIAGTASENTSIALLDPGSYFAEQFQQSLSAYGLGNASVQVTTTSPPEG 317 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT-WRAGSDAVRQILRQ 342 +A+ +S PL + S N+ A+ + + +G + G + AG+ AV +L + Sbjct: 318 TVELAAIESPPLRAFIDPTNLYSVNIYAEAMIKTLGRSLVPETGNAYTAGAIAVGSVLTE 377 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 GV I DGSGLS+ N + P ++ LQ +A+ +N + + L +AG G+L+ R Sbjct: 378 -LGVSPDGISIVDGSGLSKQNKVTPEAFVETLQVMARTENATTYRNSLAVAGSSGTLRNR 436 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 + +G+ KTG+L Y L+G++ + + ++ D R + Sbjct: 437 --MQGTLAEGRFQGKTGTLSNTYTLSGYLNPPNHPPLVLSILINNTDASGRDVRGSIDQI 494 Query: 463 VRFESRL 469 V + + L Sbjct: 495 VTYAASL 501 >UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC611F Length = 477 Score = 336 bits (863), Expect = 8e-91, Method: Composition-based stats. Identities = 115/478 (24%), Positives = 222/478 (46%), Gaps = 42/478 (8%) Query: 8 IGLTSCIAFSVQAAN-------VDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 I L+SC V + V E++ ++ +L+ + D+ + + Sbjct: 14 IFLSSCTKLPVSSGELSSQPKVVKEFVKAEIVEHGDLSFYAVDLKTGKVVADHRGKSALV 73 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD--- 115 PAS K+IT+ AAL +G D F T L +GN+ ++G+LKG L + G DPTL Sbjct: 74 PASVMKIITSAAALEVMGGDKTFETKLMYEGNINKDGILKGTLYIQGGGDPTLGSDGISA 133 Query: 116 -----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 + + V +KK+G+ ++G++++ +F W W DM ++ + Sbjct: 134 APEAFLADWVKEMKKAGITSVNGDIIVLDDLFGYDGIPGKWLWEDMGTDYAPGTYGISIF 193 Query: 171 RNCFSVSLYSAPKPGDMAFI--RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR 228 N +++ L S PG I +T +Q P G + + VP + NR Sbjct: 194 DNIYTLYLSSGA-PGTTPKIIGTKPEMKDLTFDNQAVVSPDGKRD---IYVRGVPFE-NR 248 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR---QTQVNEPGT 285 G +PQ + + + + D + G D +K+ GI ++G + + + Sbjct: 249 RGFYGIVPQDKKEITIKSDIPDPGLFLGQYFSDYMKKNGIKFNGKVTTARLTAKRPKNTV 308 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 V+A +SAP+ +++K++L +SDN A+ +F+++ G + V + +++ G Sbjct: 309 VIAVTKSAPVSEIIKVLLTRSDNHYAEHLFQILEKVE---------GVNVV-EFWKEK-G 357 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 +D+ + + DGSGLSR + ++ + V+ Y+ + EL F + P+AG +G++ + L Sbjct: 358 LDVDSLTMRDGSGLSRGDTLSTKLLTDVIMYM-DNKKELKFEELFPVAGKEGTVA--SFL 414 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 ++ K K+GS+ G+ + AG++ +R AF ++ + E + R L+ Sbjct: 415 KNTPLNEKARIKSGSMGGIQSYAGYLE-KDNKRYAFAIIVNHWNGERTELRTEMEKLL 471 >UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=20 Tax=Bacteroides RepID=D2EX46_9BACE Length = 479 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 113/440 (25%), Positives = 198/440 (45%), Gaps = 22/440 (5%) Query: 20 AANVDEYIT-QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 +A +D I +LPAG+N+A+ V + A P Y + +++ PAST K++T + AL + Sbjct: 30 SARIDALIEHKLPAGSNVAISVYDLTAGKPLYGYQADKLSRPASTMKLLTTITALSRPEA 89 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLID 138 D F T + +G +E L+GD+ G DP + + ++VAT+ + + I G V D Sbjct: 90 DEPFRTEVWYQGTIERDTLQGDMYVIGGYDPEFDEEALDSLVATVARFPFSVIKGKVYGD 149 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP--GDMAFIRVASYY 196 S+ S GW W+D F + ++++ V+ + + +SYY Sbjct: 150 VSMKDSLYWGSGWLWDDTPYSFQPYLSPLMLNKGVVKVTATPGERGDSARLECTPASSYY 209 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 +T +Q RT G L + N T+TG + R F+ QD + Sbjct: 210 TLTNKTQSRTPSAGRFRVSRDWLV----NGNNITVTGNVDARRAGTVNIFSSQD---FFM 262 Query: 257 AILKDELKQAGIT----WSGTL---LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + L+ GI + + + + +AS + + D++K ++K+SDN+ Sbjct: 263 HTFMERLQARGIRCIPAVDAEVSYLFGEFRQDSLSVRMASYE-TSVQDVVKQIMKESDNL 321 Query: 310 IADTVFRMIGHARFNVP-GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 A+ + +G + G A+R +L ++ G + +ADG GLS +N I+P Sbjct: 322 NAEAMLCRLGVQSSGKKRVSAEDGLSAIR-MLIKEMGYNPDRYNLADGCGLSNYNYISPE 380 Query: 369 TMMQVLQYIA-QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ L+Y + D LP+ G DG+L++R V AKTGS + L Sbjct: 381 LLVSFLRYAYSRTDVFQKLYKALPIGGVDGTLEFRMK-KGTLSHRNVHAKTGSFTAINCL 439 Query: 428 AGFITTASGQRMAFVQYLSG 447 AG++ +G +AF Sbjct: 440 AGYLKARNGHEIAFAIMNQN 459 >UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDC7_ACAM1 Length = 488 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 117/453 (25%), Positives = 201/453 (44%), Gaps = 28/453 (6%) Query: 22 NVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++DE +Q L A L + VQ + AS P +Q+ LPAST KV+T AAL +LGP F Sbjct: 39 DMDEIASQPLFTQARLGIAVQPLQASQPLYTKDAQRYFLPASTTKVMTTAAALTRLGPQF 98 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 R T + G G L DPTL Q ++ + LK+ G+ QI+ ++L D + Sbjct: 99 RIQTDIYGSGT---GPALDHLRIVGRGDPTLSDQQLQQIATQLKQKGIRQIN-HLLGDDT 154 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFIRVASYYPV 198 F P W W D+ + AP + I+++N + + ++ +P + ++ P Sbjct: 155 YFQGPGIVPSWEWEDLQAGYGAPVNSLILNQNAYELKIWPQALGQPLRVEWLSPHPIGPW 214 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 ++ RT+ + + E + + G+ +TG L + A AV D + Sbjct: 215 RQINRTRTVAQNAPEYIEI-VRRLKGNTLEIEITGQLRAGAPHDRSAVAVIDPGWFLLKR 273 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTV-------VASKQSAPLHDLLKIMLKKSDNMIA 311 + L I L T + + QS+PL L+KI ++S+N+ A Sbjct: 274 FRAILAAQQIKVGRLSLLSTPQERNAALKGKSEQRLTQIQSSPLTTLIKITNQESNNLYA 333 Query: 312 DTVFRMIGHARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 + + + +G A+ T + G A++Q L Q GV+ +ADGSGLSR NL++P + Sbjct: 334 EALVKALGAAQKQTSQNTHQQGLKALKQTLTQ-LGVNASTYAVADGSGLSRQNLVSPLAL 392 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 Q L I + + F + LP + G + + +K+G ++GV L G+ Sbjct: 393 TQTLNGILKSPHASTFQTSLP--------KDSIGQNSPSA---LWSKSGGMRGVSTLTGY 441 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + + F + Y + +R ++ Sbjct: 442 LQHPQSSPVLFSLMFNQYNQSSSKRRQAMDAML 474 >UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJH6_ACIF5 Length = 500 Score = 333 bits (855), Expect = 8e-90, Method: Composition-based stats. Identities = 110/487 (22%), Positives = 198/487 (40%), Gaps = 35/487 (7%) Query: 2 RFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 R+ I + ++ A + TQ G ++++Q V P + + LPA Sbjct: 17 RYFFVGILPFFWLMPAIAATGQKDANTQFGDG-QWSILIQDVQKGRPTLSVQADHGQLPA 75 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI----- 116 ST K++T L +LGP+ T + + +++GV++G L+ G DP L + Sbjct: 76 STAKLLTTAYILHELGPESHQKTRILAR-TIDDGVVRGPLIFLGGGDPDLSSRRFPFVRR 134 Query: 117 ----------RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 R + A + +GV QI +L D + F + PGW D + AP A Sbjct: 135 TVRDDPMYPMRMLAAQVWAAGVRQIPEGILADATYFPADSALPGWTEQDQRYWYGAPIHA 194 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 + + +V + PG + + + V T+ + Sbjct: 195 LMFNDAMIAVRIRPGRAPGVRTNAEIMPNPGGFIRNTVITVSA----EDPIRPVRLEKSG 250 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL--------LRQT 278 + + LTG + + A D A +A L+ L++ GI + +Q+ Sbjct: 251 SGYLLTGAISAKGGIFAAMLAQPDPAYFAAVALRQALEEKGILVGNPIQALNNKRGAKQS 310 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 + ++A +S PL + + + K S+N + + R AR G+ + + + Sbjct: 311 RGYAHYALLAKHESPPLVEEITVANKVSENTHVEVLLRDADLARGG-DGSRASTMQGLHR 369 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L G+ + + DG GLSR + ++ A ++++L + Q ++ LP+ DG+ Sbjct: 370 WLSVN-GILDTQSRLVDGCGLSREDRLSAADLVRMLLHSYQEPWGGSWRDSLPVNAEDGT 428 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEPADQRN 457 L++R A G V AKTG+L+ +LAGFI G AF + + R Sbjct: 429 LRHRLSALPA---GTVQAKTGTLRDALSLAGFIRDNLGHPQYAFAILVEHFRGSEERIRR 485 Query: 458 RRIPLVR 464 R LV+ Sbjct: 486 RMDALVQ 492 >UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87CD0 Length = 464 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 104/459 (22%), Positives = 195/459 (42%), Gaps = 14/459 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGA-SAPAIDYHS 54 +R F+ G + ++ A++ E L AN +Q + + I +++ Sbjct: 2 LRTVIFLTGFFILFSTNLY-ADLPEKFKSLSQKYRFNEANYGFAIQNLSNKTKKPITHNA 60 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 ++ AS K+ T AL LGP +++ + G V+ +LKGDL+ R D + Sbjct: 61 EKSFNTASLVKIFTTYIALKDLGPSYKWRSEFLYTGKVDKDILKGDLIFRGTGDASFSIA 120 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 D+ M+ +++ G+ +I GN+++D S F K + ++ + ++ P+ + N Sbjct: 121 DLEKMIREVQRLGIKKITGNLVLDYSFFGVMPKDINF-DDNPYRAYNVLPSPISLQSNTI 179 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 + + I + + + + ++ R S L V D G Sbjct: 180 NFKFNIDKN--IIKIISEPNLSQLKIINNLKKTNR-SCANWKSSLGVDKIDSETIEFKGS 236 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 R + A+ D + Y KD ++ G +SG + + + V+++ S P Sbjct: 237 FSDRCVGKEIDLALLDNSVYFHENFKDIWQRNGGLYSGIMKKNFEEPTNAIVISTHHSKP 296 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 + +L++ + K S N++A + I T +D V L Q+ + N + Sbjct: 297 VSELIRDINKFSLNLMARNLMLTIIKEVTGERPTEDMVNDYVNNWLSQKE-MTFENFYVD 355 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 +G+GLSR I+P ++Q+LQ I I+ P+A DG+L+ R + G Sbjct: 356 NGAGLSRDIKISPNQLLQILQKIYNDPLMPEIIASFPIASIDGTLRDRMQSKKFKQKG-- 413 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 KTGSL+ V +AGF G +FV ++G + A Sbjct: 414 HFKTGSLKDVVGIAGFFLNNDGDMHSFVFIMNGKNAKKA 452 >UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH25_HALO1 Length = 514 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 120/479 (25%), Positives = 205/479 (42%), Gaps = 22/479 (4%) Query: 12 SCIAFSVQAANVDEYITQLPAG------ANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 S I A ++ I L AG A + + VQ +G A + AS K Sbjct: 35 SGIGMEAAALSLGARIDALLAGHAPLTDARVGIFVQDLGTGAVLYAREAGNSFNVASVTK 94 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 VIT A+L LGPDFR+ T + T +E V+ G+L + +PTL D+ + L++ Sbjct: 95 VITMAASLALLGPDFRYRTAVLTD-KIEGSVVTGNLYLQPRGNPTLSSADLELLSTHLER 153 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWN-DMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 +G+ QI G +++D F P + + F AP AA ++RN F+V + +A Sbjct: 154 AGITQIRGELIVDAGYFDDAASPPHFDEQPEEQAAFRAPVGAANLERNAFTVRVRAARAG 213 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT-LTGCLPQRSEPLP 243 G A + + + + + S + + D + G + S+ + Sbjct: 214 GQRAAVWIEPETSYVRLGRDEVITQSSGRDSVRVVSKLDDDGRMVVDVVGRVRAGSDTMG 273 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 ++D ++AG + L G+ R +V ++A+ S PL +++ + Sbjct: 274 FRRRIEDPVAFAGETFRAVLAARGLRIR-KPSRAGEVPSDARLLATVDSEPLSVMVQRLG 332 Query: 304 KKSDNMIADTVFRMIGH-----ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 K SDN +A+T+ + I A P TW G AV + L Q G+D +GSG Sbjct: 333 KYSDNFVAETLLKTIAAEHRANADAAPPATWAEGVAAVERFLVDQVGLDDDAFRYENGSG 392 Query: 359 LSRHNLIAPATMMQVLQYIA-QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 L + +PA + VL +S L +AG DG+L+ R + + G+V AK Sbjct: 393 LFDASGFSPAQVGAVLAAAQGDMRYGPELMSALAIAGVDGTLRGR--MKRTDARGRVRAK 450 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 TG+L V LAG+I F +++ + R R + ++ + + ++ Sbjct: 451 TGTLAAVIALAGYIDAGPRAPAVFAIFVNDIEP----RWIARTAARRLQDQVVEAVIEH 505 >UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY12_CHLT3 Length = 521 Score = 331 bits (850), Expect = 3e-89, Method: Composition-based stats. Identities = 105/469 (22%), Positives = 194/469 (41%), Gaps = 36/469 (7%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 ++T+ P + ++ + + + + +PAS QK++T AA L +FR++T Sbjct: 53 FLTRSPGNFFWGVRIESLEKNQMIYSLNDHKNFIPASNQKILTVAAAFNFLDTNFRYSTE 112 Query: 86 LETKGNVE-----NGVLKGDLVARFGADPTLKRQDIRN--------MVATLKKSGVNQID 132 + GN G+ GD++ + +P + + + +LK+ G I Sbjct: 113 VYLSGNGNSNGNTQGIFDGDVIVKSNGNPCIASHWLEARPTIFFQWLADSLKRMGYAVIK 172 Query: 133 GNVLIDTSIF-----------ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 G+ + D S F D W W DM ++P +A + N V+ Y Sbjct: 173 GDFIGDDSAFLISDMGRDFRGGDGDYPGSWEWGDMLFAMASPASAISFNENMVRVTAYPG 232 Query: 182 PKPGDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 K GD + + + +Q T S + ++ N + G +P Sbjct: 233 AKVGDKPIVETTVESAFLPITNQAVTGEANSQKTIRITREL---GTNHVLIVGNIPIGRW 289 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG----TVVASKQSAPLH 296 AV+ + ++++ ++ GI +G L R V ++ +S L Sbjct: 290 RESEPIAVEQPTLFFLTVMRETFEKKGILHAGLLRRAEGVWPGSGDSLRLLYRYESPRLI 349 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 +L+ + K+S+N A V R +G + N + AG A+ L + G+ + + DG Sbjct: 350 RILEYINKESNNFAAGQVLRTLGKSVVN-EASHEAGLQAIEIYL-ESLGITEVSYRLKDG 407 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR NLI+P +++VL+++ Q F++ L +AG DG+L R L + +V Sbjct: 408 SGLSRQNLISPEALVKVLKHVYQSKYFGAFLNTLSVAGVDGTLSRR--LVGTNAETRVFG 465 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 KTG L V G++ A G+ + Y + + ++R Sbjct: 466 KTGFLSSVRTFIGYVQAADGEWLGVSLMSMNYTQPTRQIESLQDEVLRL 514 >UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH3_METPP Length = 514 Score = 331 bits (849), Expect = 3e-89, Method: Composition-based stats. Identities = 112/456 (24%), Positives = 191/456 (41%), Gaps = 32/456 (7%) Query: 28 TQLPAGANLALMVQKVGASAPAI----DYHSQQMALPASTQKVITALAALIQLGPDFRFT 83 QLPA A +A +++ P + +QQ PAS K+ T AL LGP + + Sbjct: 46 AQLPADALVAYIIELGPPGPPRGLPRLTHRAQQPVNPASLMKLYTTGVALELLGPAWTWP 105 Query: 84 TTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF- 142 T + T G V +GVL+GDL+ + DPTL + + ++ +++ G+++I G++++D S F Sbjct: 106 TPVLTTGQVVDGVLQGDLILQGRGDPTLVIERLWLLLREVRQRGIHEIRGDIVLDGSAFM 165 Query: 143 --ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 + P + + ++ P A +++ ++ P G + V + Sbjct: 166 LNGADAGDPADFDGERFRPYNVRPDALLLNHKSVTLRFVPEPSRGVARVSTDVNLAGVQI 225 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 S V + G L D R LTG P A + SY ++ Sbjct: 226 DSAVPMVS-GPCGDWRGSLKPAFDDPGRIRLTGLYPVSCGEKTWPVAYAEPGSYNVRLIA 284 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + + G +G++ R + S PL +++ + K S+N++A +F +G Sbjct: 285 EAWHEVGGQLAGSV-RNGPAPVAAQPLFEATSPPLAAVVRDINKFSNNVMAQQLFLSLGL 343 Query: 321 ARFNV----------------------PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 T A + VR +R +AG G I +GSG Sbjct: 344 IPAGTLPLPASATTVATGEVSTPQTPAGNTADAAREMVRAQVRSRAGCTDGEFSIDNGSG 403 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR + + + LQ + +S LPL G DG+ + R G + G+ KT Sbjct: 404 LSRQSRSSARCLGAWLQALWASPVMPELMSSLPLTGIDGTAR-RPGRNWGAALGRAHLKT 462 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 GSL+ LAG++ SG+R AFV ++ + A Sbjct: 463 GSLRDAMGLAGYVLGQSGRRYAFVAIVNHPSAGAAR 498 >UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN1_FIBSS Length = 715 Score = 329 bits (845), Expect = 1e-88, Method: Composition-based stats. Identities = 112/490 (22%), Positives = 204/490 (41%), Gaps = 27/490 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + + + + + V A+ Y+ L G+ + ++ V + + ++ P Sbjct: 5 FKVASLLPFFVAPLFAHVNVASYKSYVDSLLPGSRFGMSLRSVKMGKEIGNVNGNELFTP 64 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNV--ENGVLKGDLVARFGADPTLKRQD--- 115 AST K +T AA+ L D+ T + G++ + L G L R DP + + Sbjct: 65 ASTLKTLTTAAAIHLLPLDYEPKTEMTVFGDINKKKRTLTGTLKVRGEGDPNISARYYDD 124 Query: 116 ----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 + NM +L+ GV+ I G + +DTS + KA W N + A + Sbjct: 125 PFYILNNMADSLRAMGVDTIVGQIDLDTSYYTGPWKAENWRRNYYDSWYGAEIGPLGFND 184 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 NC ++ + GD A + + V + + ++T+ +G+ + +D D + T Sbjct: 185 NCVTIRFWPGYFIGDTAVVSIQPDVGYVKVVNNLKTV-KGTKKKWVYGIDP---DKSIIT 240 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 L G + + + + +++ Y A LK GI + + S Sbjct: 241 LGGTIGEDIDSASMVLPIRNPIGYFRAAFMYALKDRGIVFKEDATIASNTELKK---FSY 297 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +APL +L + ++S N A+T+ R +G A+ G+ G A R+ L Q G+ + Sbjct: 298 SAAPLLSILDEINQRSQNFHAETLLRNLG-AQIAGEGSVEGGRKAERRFL-QDMGLKASD 355 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 + DGSGLS N + P+T+ ++L +A+H +I+ G GS R +A Sbjct: 356 FEVFDGSGLSPENKVKPSTVARLLAKMARHPKGAYYINSFASPGV-GSGAKRMIDFEAPW 414 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI-----PLVRF 465 KTG + V+ L G+I T G + YL+G P + + L+ + Sbjct: 415 --LTRFKTGYIAEVHGLVGYIYTVDGDTLTAAMYLNGTNTNPDYKSKDVLDTLWMRLISY 472 Query: 466 ESRLYKDIYQ 475 + YK + Q Sbjct: 473 TNNNYKSLLQ 482 >UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Rhodocyclaceae RepID=A1KBR6_AZOSB Length = 488 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 120/432 (27%), Positives = 204/432 (47%), Gaps = 10/432 (2%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 AA +D ++PA A ++ VQ V S PA+ +++ + PAST K++TA AA Q Sbjct: 46 PPAVAAALD--TARIPAEA-VSAWVQPVDGSPPALAHNAARPMNPASTMKLVTAFAAFSQ 102 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 LGP + + T + G V NG L+G+L GADP L +R ++ ++ GV I G + Sbjct: 103 LGPAYTWHTRVARAGEVRNGRLEGELFLIGGADPMLDEDRVRRLLRKVRGLGVQHIAGGI 162 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 ++D S A P + +++ P ++ N ++L+ A G + + Sbjct: 163 VLDASALALPPHDPALFDGRPLRPYNSGPYGLLMHYNTLQLALFPAEAGGPVTVVAEPPL 222 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 + + +++ G+ E L+ L+G LP + A ++YA Sbjct: 223 AGLALENRL-VGGSGACEPWQRGLEAALSPAGGLILSGSLPVACGVRNWSAAPLAPSAYA 281 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 A++ + G T +G +R+ T++ ++S PL D+++ M K S N+IA + Sbjct: 282 AALVGAVWGELGGT-AGNAVREAVTPGSATILLDEESRPLADVIRDMNKWSSNVIARQLL 340 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 +G N PG A Q AG+D +I +G+GLSR + T+ L Sbjct: 341 ATLG---MNQPGDAVQAGAAAAQRALAAAGIDTSGLVIENGAGLSRLERVRADTLAATLL 397 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 Q +I+ LP+AG DG+ + R L+ + +G KTG+L+GV +AG++T A Sbjct: 398 AAWQRPWMPEYIAALPVAGVDGTARRR--LNGSPANGYAHLKTGTLEGVRAMAGYVTDAR 455 Query: 436 GQRMAFVQYLSG 447 GQR V ++ Sbjct: 456 GQRHIVVMMVNH 467 >UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Tax=Francisella RepID=B0U095_FRAP2 Length = 485 Score = 328 bits (840), Expect = 4e-88, Method: Composition-based stats. Identities = 124/477 (25%), Positives = 221/477 (46%), Gaps = 24/477 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPA 61 S FII L + ++ + + + + A +A+ Q+ Y + PA Sbjct: 29 LSIFIISLNAS--YASTRSEIQSLVKKYNLTDAKIAIATQRTMTGNDLYSYAQNRSMKPA 86 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGN-VENGVLKGDLVARFGADPTLKRQDIRNMV 120 S KV T ++ L+ + DFRFTTT+ N V N +L GD+ +F +P L + +++ Sbjct: 87 SNNKVFTIVSGLLSIPDDFRFTTTILYPSNRVNNNILHGDMYIKFTGNPALTGGQLSSLI 146 Query: 121 ATLK-KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 +K + G+++I G+V + +F+ GW D T C+ AP ++ ++RNC + L Sbjct: 147 KKIKTEKGISKITGDVYL-VGVFSGPYTPEGWSKEDSTLCYGAPASSFTLNRNCTVIKLV 205 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 P + +++ + + + A + D N ++G L R+ Sbjct: 206 KNPNSMTTRVVELSNASNIGIKNSATYTSASKATI------ISMNDNNVLYISGYLS-RT 258 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 A+++ A + D L GI ++ T + + +SA + Sbjct: 259 AEKMFKLAIKNPALKTIDTVNDFLSSNGIKHGNVIITGNIPAGYDTQLVT-KSATIGHFF 317 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 LK SDN+ A+T+ IG + G+ +AG++AV+ IL ++ G+D I DGSGL Sbjct: 318 DQTLKHSDNLYAETILNTIGLKEKGI-GSTKAGTEAVQSILYKKLGLDTSALTIYDGSGL 376 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 S + + P M+ L + F + LP +G G++ YR G + G+V AKTG Sbjct: 377 SHLDRVTPEFMVDFLTKTYNSEVGKQFYNYLPASGISGTISYRMG---GKLLGRVHAKTG 433 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 +L GV L+G++ TA R++F L+ ++ +D+ N R RF+ ++ Y+N Sbjct: 434 TLAGVSTLSGYVLTAKNHRISFSIMLND--LKHSDRYNAR----RFQDKVVDVFYRN 484 >UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DJ53_THEEB Length = 465 Score = 325 bits (834), Expect = 2e-87, Method: Composition-based stats. Identities = 99/429 (23%), Positives = 173/429 (40%), Gaps = 29/429 (6%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 ++V+ + + ++ +++ L AS K+ T AAL G RF TTL + Sbjct: 46 GQWGIVVEDLRSGEVLYNHQGEKLFLVASNVKLTTVAAALDYWGASHRFVTTLSARSPDR 105 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 L + DP+ QD++ M L + G+ QI +++ P W Sbjct: 106 T-----TLRLQGSFDPSFSSQDLQQMATRLVQQGIRQIQ---VLELGGVTPVRIEPTWAI 157 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 D+T A +++N + + P + ++ RT+P + E Sbjct: 158 EDLTMGNVAVVTRLSINQNALKLIATPQGLAQPLILQPPEGDLPWPVVNETRTVPTDAPE 217 Query: 214 AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT 273 E+ + + G L + SEP + +++ Y ++ QAGI Sbjct: 218 FLESEVRG-----QQIIVRGQLHRGSEPAEMPIPLREPIPYLQQQVQRAFAQAGIQVQ-Q 271 Query: 274 LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 + V+ S PL L+ +L++SDN A+ +F A Sbjct: 272 IRPMETAEPLPDVLVRHASPPLSRLILPILQESDNFYAEMLF-----------AALEAAQ 320 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 RQ +Q GV ++ DGSGLSR N + P ++ +LQ +A+ D+ + LPLA Sbjct: 321 PGYRQRYLEQMGVP--GAVLVDGSGLSRQNWLTPKGLVTLLQQMARSDHASLWRRSLPLA 378 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G G+L+ R L ++ AKTG+L+GV LAG++ + + F ++ A Sbjct: 379 GRSGTLRQR--LRDTAAQDRLWAKTGTLRGVAALAGYVEPLEDRPLVFSMVVNQAGETTA 436 Query: 454 DQRNRRIPL 462 R + Sbjct: 437 HLRAGLDRI 445 >UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=3 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWR1_DYAFD Length = 492 Score = 325 bits (833), Expect = 2e-87, Method: Composition-based stats. Identities = 103/444 (23%), Positives = 179/444 (40%), Gaps = 23/444 (5%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A ++ ++ +LA+ ++ V + + ++ AST K+++ L G DF Sbjct: 34 AVLELQNSEFMRSGSLAVSIKAVKENKNVFSLNHERSLPSASTLKLVSTATVLALFGGDF 93 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR----------NMVATLKKSGVNQ 130 +F T LE G + L G+L DP+L + VA +K++G+ Sbjct: 94 KFQTFLEHDGIIRGDTLAGNLYIHGTGDPSLGSDRFKGYPTAQEIITRWVAAVKRAGIRY 153 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 I G VL D S F A W W DM + A + N + V GD + Sbjct: 154 IKGKVLADASFFDKEAVASTWIWGDMGNYYGAGVQGLNFNENLYRVKFKPGGDVGDPTSV 213 Query: 191 --RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + ++ +QV T RGS + + N LTG +P + + ++ Sbjct: 214 LGTDPAIPYLSFTNQVTTGERGSGDKTVIYSSPL---GNNVVLTGTVPAGNATFTVKGSI 270 Query: 249 QDGASYAGAILKDELKQAGITWSGTLL----RQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 D A YA LK+ L G+ + + P ++ +S PL +L + Sbjct: 271 PDPAWYAAYALKNALSGNGVVVAEAAQPSGNAASTTQNPKRIIDEYKSPPLRELCQQTNF 330 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 S N+ AD F+ G G + + A+ + G D+ I DGSGLS Sbjct: 331 WSINLFADAFFKQSGKRLSGSSG-FDDAATAITGYWSGR-GADLRGFYIKDGSGLSPSGS 388 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I +++ +L + + +F + + G +G++ R + G + AK+GS++G Sbjct: 389 ITASSLTDILNLANKDVSFKDFYQSIAILGQNGTV--RNLGKGSRAAGNMHAKSGSIEGT 446 Query: 425 YNLAGFITTASGQRMAFVQYLSGY 448 AG++ SG ++F Y Sbjct: 447 RAFAGYVNAKSGALLSFTIIAHKY 470 >UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria RepID=A9M1W1_NEIM0 Length = 515 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 100/415 (24%), Positives = 177/415 (42%), Gaps = 11/415 (2%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 +A+ VQ++ + ID+ S PAST K++TA AA G ++R+ T ++ G Sbjct: 74 PQNEIAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGT 133 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 V +G L G+L DP ++++ + L++ G+ I G++++D S++ +P Sbjct: 134 VNDGTLDGNLYWAGSGDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVG-SPDD 192 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D F PP ++ V + + + ++ + Sbjct: 193 FEADSGSPFMTPPNPTMLSAGMVMVRAERNAAD-STDILTDPPLPHIFAQNNLKITASQA 251 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 A +L N L G +P+ P+ + + G S Sbjct: 252 ACPSIKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRIS 311 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 + + E +A S P+ ++L M K+SDN+IA +VF +G +P Sbjct: 312 DGI-GISDTPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLG-GNGKLPAVSEQ 369 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 + AVR+ L +G+D+ + ++ +GSGLSR + M Q+L+ +FI LP Sbjct: 370 AASAVRREL-AVSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLP 428 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 +AG DG+L+ R G + KTG+L V LAG+ + MA V ++ Sbjct: 429 IAGTDGTLRNRFKQSG----GLLRLKTGTLNNVRALAGYWLGD--KPMAVVVIIN 477 >UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6C9_9NEIS Length = 477 Score = 323 bits (828), Expect = 9e-87, Method: Composition-based stats. Identities = 110/439 (25%), Positives = 194/439 (44%), Gaps = 13/439 (2%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + L +++ A ++ Y +PA ++AL V Y ++Q PAST K++ Sbjct: 7 VALLMLACWTLPACALELY--GIPAD-DIALWAAPVEGKGVFAAYRAEQAVNPASTMKLL 63 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 T +AL +L PD+R+ + L + + +GVL+GDL DP +D++ M+ TL+ G Sbjct: 64 TGWSALTRLTPDYRWHSELVSAAPLRHGVLQGDLYWIGSGDPRFANRDLQGMLRTLRARG 123 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 + +I G +L+D F+ A + D+ + F P + + + G+ Sbjct: 124 IERIQGRLLLDKRAFSRIGSASDFG-GDVGRVFMVDPDTHLTGLKVAWLRFF---NDGNG 179 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 A + + S + + + + +++G LP+ + Sbjct: 180 ARVTLDPPLAGVRLSSALSDGGEGPCDDVRRSVSIQVENEQVSVSGALPRSCDGAQSYVN 239 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V D YA ++ G R T E V+AS S PL L + K S+ Sbjct: 240 VLDHDQYAAQAFAALWRELGGRGPAASGRGTAPPE-ARVLASHDSDPLLVALADINKYSN 298 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N +A +F +G T AVR+ L + AG+ + +G+GLSR ++ Sbjct: 299 NTMARALFLTLGRVAGGSGDTVADAERAVRETLAE-AGISAAPLALENGAGLSRQERVSA 357 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 + +VL+ A+ F++ LP+A DG+L+ R A + ++ KTG+L GV L Sbjct: 358 RLLGEVLRSAARGPYAGEFLASLPIAAADGTLKKRF----ANLGPRLRLKTGTLDGVRAL 413 Query: 428 AGFITTASGQRMAFVQYLS 446 AG+ A G+R+A V ++ Sbjct: 414 AGYWQAADGRRLAIVAIVN 432 >UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Polynucleobacter necessarius RepID=A4SZV9_POLSQ Length = 513 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 91/444 (20%), Positives = 183/444 (41%), Gaps = 24/444 (5%) Query: 28 TQLPAGANLALMVQKVGASAP-------AIDYHSQQMALPASTQKVITALAALIQLGPDF 80 Q+P A +++ V ++ P +++H+ + PAST KV+T L++L LGP + Sbjct: 48 NQIPLDA-VSISVIEIEPGRPGKQVAKTLLNWHANEAMNPASTMKVLTTLSSLDILGPQY 106 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 R+ T + T G + G LKG++ + DP L +++ ++ L+ G+ +IDGN+ D S Sbjct: 107 RWRTNVYTDGVIHQGTLKGNIYLQGTGDPKLVPEELAKLMKDLQGLGIQKIDGNLFFDRS 166 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 +A + + ++ P + S L + + + + + Sbjct: 167 AYAPSVMETNTIDGESLRAYNVSPDPLLYAFRTLSFQLGKSRTADFIDLSYSPALSQLKV 226 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLN--------RFTLTGCLPQRSEPLPLAFAVQDGA 252 +Q++ + + + + N +G P + + D Sbjct: 227 VNQMQLVDK-PCDNWKSNIRFNLDPENSSNTDQAITAQFSGTFPSSCKGVNYNVVALDAN 285 Query: 253 SYAGAILKDELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 ++ + AG W + V ++ + L D ++ + K S+N++A Sbjct: 286 TFLTQGFAAAWELAGGAWAQAPTGKSGNVPLAARLLLQFEGINLGDDVQDINKYSNNVMA 345 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + + + P T G ++ L+Q + ++ +I +GSGLSR+ I+ M Sbjct: 346 RQLLLTLALEKMGKPATTANGDLVIQSWLKQNS-MNFSGLVIENGSGLSRNEAISANQMN 404 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYR-----AGLHQAGVDGKVSAKTGSLQGVYN 426 Q+L F + LP+AG DG+++ R + KTGSL V Sbjct: 405 QLLLTARNLPISDIFYNSLPIAGTDGTMRNRLMTQLRKFLHLKKKPEARIKTGSLADVRA 464 Query: 427 LAGFITTASGQRMAFVQYLSGYAV 450 +AG++ + SG+ A +++ Sbjct: 465 IAGYVMSKSGKLYAVTSFINHPNA 488 >UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fusobacterium RepID=C3WBP8_FUSMR Length = 555 Score = 323 bits (827), Expect = 1e-86, Method: Composition-based stats. Identities = 100/454 (22%), Positives = 205/454 (45%), Gaps = 37/454 (8%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 ++ +N+ + V+++ + Y+ PAS KVIT+ AL LG D R T + Sbjct: 127 EMLEHSNIGIEVREIESGEIIAQYNKGVAITPASIMKVITSATALEVLGADTRLETKVVY 186 Query: 89 KGNVEN-GVLKGDLVARFGADPTLKRQDIR--------NMVATLKKSGVNQIDGNVLIDT 139 G +++ G L GD+ G DPTL I+ ++ +K SG+ +I G++++ Sbjct: 187 DGKIDSEGTLTGDIYIIGGGDPTLGSDGIKKEQTAFITEWISKVKSSGIKKIKGDIIVID 246 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 ++F W W D + V N +++ L S K D+ + + Sbjct: 247 NLFGYVGVEEKWLWEDFGTNYGQGTYGISVFDNLYTLYLSSTDKKIDILGTK-PEIDGLK 305 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 ++++ PRG + L N+ L G +P + + + + A + G Sbjct: 306 FENRLKISPRGRRDFSVRGLPF----ENKRVLNGEVPANLKKIVTKSDIPNPALFLGQYF 361 Query: 260 KDELKQAGITWSGTLLR---QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 K LK +G++ SG + + + +A +SA + ++++++LK+SDN + +++ Sbjct: 362 KKNLKNSGVSVSGDIKTSRNSNKRPKNPKTLAITKSATIEEMVRVLLKRSDNHYTEHLYQ 421 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 ++ + + +++ G+D ++ DGSGLSR + ++ + + +L Y Sbjct: 422 LLKLKDVK-----------ISEFWKEK-GIDTKALVMLDGSGLSRGDYVSASILTDILAY 469 Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 + ++N F +LP GY+G++ L DG V K+GS+ G+ + G+I G Sbjct: 470 M--NENYPEFEKLLPRGGYEGTVSD--FLEPKVFDGIVRVKSGSMSGIQSYTGYIE-KDG 524 Query: 437 QRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 ++AF ++ + ++ +F + L+ Sbjct: 525 TKLAFTIIVNHWNGSRNRLKDEME---KFINNLF 555 >UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCL1_ELUMP Length = 496 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 99/468 (21%), Positives = 193/468 (41%), Gaps = 23/468 (4%) Query: 6 FIIGLTSCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 F+ + C + ++ A + + ++ + + + V + + + P S Sbjct: 5 FLTFIILCFSLTLHGAEIKVPLQSEALKNTSYSFYAKYVD-GEDILTINPELRLTPGSLI 63 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTLKRQDIRN----- 118 K+ T AA+ +GP+ +F T + G G LKG++ + G DP+L I+ Sbjct: 64 KLFTTAAAIEYMGPEHKFKTEIYFDGKKNIFGTLKGNVYIKGGGDPSLGSNRIKTNPSME 123 Query: 119 -----MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 + ++ + +IDG+++ D S+F+ ++ P W DM F A A + N Sbjct: 124 EILDFWASRIESQEIKKIDGDIIADVSLFSGNNLPPKTAWEDMGNYFGATSEALNFNDNM 183 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 F++ P+ + S + + + + + + PG G Sbjct: 184 FTLRFKPQPQKLSLVEFDSMSPQVERISVKSYVVTDPFSSSDEIYIFAAPGQFE-LIARG 242 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR--QTQVNEPGTVVASKQ 291 +P ++ + ++ D + K+EL + GI +G T++AS Sbjct: 243 TVPIKTTASYVYASLPDPPLFTAQQFKNELLKRGIKITGRARVSYGNFNYTDKTLLASSY 302 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S L +++ I+ KKS N+ ++ + + I + G+ G V LR Q + N Sbjct: 303 SPALFEIINIINKKSFNLYSEVLLKNIAVFNTGI-GSTEQGIIEVENFLRAQNNL-TDNF 360 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML--PLAGYDGSLQYRAGLHQAG 409 I DGSGLSR++ + T++ L+ + + F + L P AG + A + Sbjct: 361 KIYDGSGLSRNSFVNTKTVITFLENMTKKPYFEIFYNSLLTP-AGEEKHRLKNAFSNSPA 419 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 D + KTG L GV + +G+I +G+ + F ++ Y V + Sbjct: 420 FD--LHMKTGFLTGVRSYSGYIKDCNGKMITFSFIVNNYTVTTNEINK 465 >UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C561_HYPNA Length = 480 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 121/481 (25%), Positives = 198/481 (41%), Gaps = 34/481 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQA--------ANVDEYITQLPAGANLALMVQKVGASAPAIDY 52 M RF+ G + + F+V A + G + V + Sbjct: 1 MIRPRFLSGALAAVVFAVSACTTTPAEPPPPAPFEAMQVEGVRWGVSVMTLD-GREVFSR 59 Query: 53 HSQQMALPASTQKVITALAALIQLG----PDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 +++ +PAS KV T+ AA L PD T+L + E DLV D Sbjct: 60 SAEERFIPASNTKVFTSAAAFHYLTGLDTPDPAGGTSLWLEPGGEGEAP--DLVLMGAGD 117 Query: 109 PTL------KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSA 162 P L + + + +G+ ++ G+V+ D ++ + GW WN+ ++A Sbjct: 118 PGLMDSADCVDNCLHQLADAVVAAGITRV-GDVIGDDTLLPAALWGQGWSWNNFVWYYTA 176 Query: 163 PPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT-MFSQVRTLPRGSAEAQYCELDV 221 P +A V+ N +++ PG+ A + A + + ++V T P GS + V Sbjct: 177 PISALTVNENTLGLTVSPGAAPGEPAVLSWAPGDDLLLVDNKVITGPPGSLQTLRM---V 233 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV- 280 L LT +P + P A A+ D A A L + G+T G + + + Sbjct: 234 RVPGLEMLRLTEYIPADAAPRMYAVAMHDPAETAALRFVRLLIERGVTVEGLMRARHEAD 293 Query: 281 --NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 ++A AP+ + +L S N+ A+ + R I AR + G V Sbjct: 294 DSPAEQVLIARLTPAPIKASIGRILVNSQNLHAELLLRKIALARGQLSP---EGGQEVLT 350 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L +AG+ + DGSGLS +N + P M Q L++ A + +MLP+ G DG+ Sbjct: 351 ALVAEAGLTPVEAELFDGSGLSTYNRVTPRGMAQFLRWAAGQPWGDAWRAMLPVGGADGT 410 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 L R ++GKV AKTGSL GV L+G++T SGQ + F Y + + Sbjct: 411 LARR--FKGTSLEGKVFAKTGSLHGVNALSGYMTARSGQTLVFAVYANDRPADAPSIIAE 468 Query: 459 R 459 Sbjct: 469 M 469 >UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDI4_LARHH Length = 478 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 111/464 (23%), Positives = 192/464 (41%), Gaps = 21/464 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQAANV---------DEYITQLPAGA--NLALMVQKVGASAPA 49 M+F S ++ +V A + + +P + +L++ + V AP Sbjct: 1 MKFKHISDKSHSWLSAAVLVAGLLGPAGWAVAAPALPGVPGLSARDLSVWIAPVEGGAPW 60 Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 + + + PAST K++T+ AAL LGPD+R+ T + + +G L GDL + DP Sbjct: 61 LSHRANVAVNPASTMKLVTSFAALDLLGPDYRWRTRWLSPAAIRDGHLTGDLYWQGSGDP 120 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 R + +M T++ G+ QIDG +L+D +F + + D + + P A + Sbjct: 121 AFDRDALADMARTIRARGIGQIDGRLLLDGQVFRTLGSSSELDP-DEGRSYQVGPDALLT 179 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 ++L + P A + + + ++++ G L Sbjct: 180 QFKTVELTLLATPSG--WAVRPAPALPGLQIDNRLQRDDSGRECPSAARLVSQTVRGQEV 237 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVAS 289 L+G LP+ + L V D A + QA +A Sbjct: 238 RLSGRLPESCDGSHLYVPVFDHARFQSEA-FAAAWQAAGGQGQPAAASGSTPAGARELAR 296 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S PL +L + + S+N++A VF +G A T R + AVR L + G+D Sbjct: 297 HDSPPLSQVLTDLNRYSNNVMARQVFLTLGAANPQSGDTARDAASAVRASLARH-GIDTQ 355 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 +G+GLSRH + A + ++L+ F S+LP G +G+L+ R Sbjct: 356 GFAFENGAGLSRHERVTAAGLGEMLRAAQATPFWAEFASLLPRPGGEGTLKRRL----PA 411 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 + + KTG+L V LAG++ A G+R A V + + A Sbjct: 412 LAEQARFKTGTLNDVRALAGYL-DAGGRRWAVVLIANRAGISNA 454 >UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRV5_THISH Length = 460 Score = 320 bits (821), Expect = 6e-86, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 168/408 (41%), Gaps = 8/408 (1%) Query: 12 SCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + A ++ A V+ I A +A+ VQ V A P + ++ PAS K+ T+L Sbjct: 18 TASAQNLLPAQVNRVIQAHGMDPARVAIWVQPVNADKPWLAHNPDTALNPASVIKLATSL 77 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQ 130 AAL LGP + + T + G VE GVLKGDL G DP L ++ ++ L++ G+ + Sbjct: 78 AALEVLGPAYTWKTRVHLGGPVEQGVLKGDLWLIGGGDPFLVTEEFWKLLGALRRQGIRR 137 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 I+G+++ D S F D+ P + ++ P +V+ N V + P ++ + Sbjct: 138 IEGDLVFDLSYFRLPDEEPAAFDGQPHRVYNQGPHPLLVNFNALHVEVMPDPDGDAVSAV 197 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +++R + V + L G P P A Sbjct: 198 VDPPIAGLHIDNRLRQRAGPCGGYRLGISYRVLEERTGIGLDGRFPGSCGPHRFARTALT 257 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 +Y + + Q G + G T + +S PL +L+++ K S+N++ Sbjct: 258 PEAYVHGLFRSLWAQWGGEFEGGWRVDTWSDVEREPTLVHESRPLGELIRLANKHSNNVM 317 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 +G F +P T G +A+ L + G+D ++ + +GLSRHN + + Sbjct: 318 TRHFELTLGAETFGMPATPEKGLNAILDYLAAR-GIDSKGLVLDNAAGLSRHNRVTARQL 376 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGS-----LQYRAGLHQAGVDGK 413 +L+ Q I +L G G L+ R+ + Sbjct: 377 AGILRAGRQSPLHAG-IHLLSGPGRSGRHPAQPLRGRSCRRAHAPQNR 423 >UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Marinomonas sp. MED121 RepID=A3YAM6_9GAMM Length = 496 Score = 319 bits (818), Expect = 1e-85, Method: Composition-based stats. Identities = 146/500 (29%), Positives = 242/500 (48%), Gaps = 44/500 (8%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 F I L I+ + Q+ + + P GA + + ++Q +A PAS Sbjct: 13 FKAAFIFLICLISMAAQSQAL---LNNAPKGALV-------ITQSDWHSQNTQYLANPAS 62 Query: 63 TQKVITALAALIQLGPDFRFTTTLETK-GNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 K+ TA A LG ++RF T L ++ G L G L DP+ ++D+ ++ Sbjct: 63 LMKIFTATLATETLGKNYRFKTELAYDETSLNQGRLTGPLTLTLTGDPSFTQKDLHTLLM 122 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 TL K+GV ++D V ID S + H + G WND CF+AP +AA+++RNC +L A Sbjct: 123 TLAKAGVKKLD-KVEIDASRYQGHAWSLGQVWNDHGICFAAPTSAAMINRNCVFGNLK-A 180 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 KPG +A P+T+ +QV T+ +A+ C++ + N + LTGC+ ++ + Sbjct: 181 TKPGQVAHFYQTPNSPLTVENQVVTIEAN--KAKGCQVLLKVLGANHYRLTGCIDEKRKT 238 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA---------SKQS 292 LPL F+ + ++ I EL G G+ + + +++ + +A S S Sbjct: 239 LPLGFSANEANTFFAHIFMQELILLGF---GSEIEISFIDQAPSWLAKTDKSVKRISHHS 295 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI---------LRQQ 343 APL L+ MLK+SDN++AD +F+ GH F A + + L + Sbjct: 296 APLTKLVARMLKRSDNLVADALFKASGHQYFLSENAGAASFETLDAYQKGSLALMSLLDK 355 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 +D ++ DGSGLSR NL+ ++ QVL+ H + + LP+A G+L+ R Sbjct: 356 NQIDSQGLVVRDGSGLSRENLLYATSLYQVLELWLSHPKFVWLVEALPIAAQSGTLKNRE 415 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG----QRMAFVQYLSGYA----VEPADQ 455 L + G+V AK+GS+QGV NLAGF+ A + FV ++ ++ V+PA Sbjct: 416 SLKHDMLKGRVLAKSGSMQGVVNLAGFVQVADENKGLKLRPFVFMVNQFSKSKAVKPAKF 475 Query: 456 RNRRIPLVRFESRLYKDIYQ 475 + L +FE+ ++ Sbjct: 476 SVEELSLFKFEAGFLTQGFR 495 >UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Gammaproteobacteria RepID=A1U2Q6_MARAV Length = 523 Score = 317 bits (813), Expect = 5e-85, Method: Composition-based stats. Identities = 103/427 (24%), Positives = 189/427 (44%), Gaps = 14/427 (3%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 L + L++ V + ++ + P S K++T AAL LGP + T Sbjct: 64 KSLNSDEALSVAVIPLNGPGIEQYVNADTLMSPGSIMKLVTTYAALELLGPTHHWKTDFL 123 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 T G + L+G+L RFG DP L + + + + LK G+N+I+G++++D S F Sbjct: 124 TDGMMVGDSLEGNLYVRFGGDPKLTLERLWSTLRELKSMGINRIEGDLVLDGSYFRVDGG 183 Query: 148 APGWPW--NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 P + ++ F P+ + + N + + + G A+ V++ ++V Sbjct: 184 FPTFEDNGDNPHAPFLVEPSGYLTNLNLLHFQVRADER-GTQAWT-TPDLGEVSIDNRVT 241 Query: 206 TLPRGSAEAQ-YCELDVVPGDLNRFT--LTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 LP G A+ + + V + ++ T +TG LPQ ++ Y+ ++++ Sbjct: 242 ALPEGPCPARSRFDWEPVFHENHQVTVRVTGQLPQGCRSTT-YLSLLPHERYSASVIRSV 300 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA- 321 L GI SG R E +V S L +++ + K S N++A + IG Sbjct: 301 LSDMGIIVSGGD-RFENTPEDARLVMRATSPDLVSMVRDINKWSSNVMARQMLLTIGAEF 359 Query: 322 -RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 + + AG V + L + G++ +I +G+GL+RH I Q+LQ Sbjct: 360 RKEDDKDDRVAGIRTVYEWL-ENTGINTAGMVIDNGAGLTRHGRITARQGAQILQQAWDS 418 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + ++ +P+ DG++ R L G+DG+ KTG L+ V ++AGF + A Sbjct: 419 PYASDLMASMPIIAMDGTMARR--LRNTGMDGEGRIKTGYLENVRSIAGFTRDDNNTTWA 476 Query: 441 FVQYLSG 447 V ++ Sbjct: 477 IVGMVNN 483 >UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIE9_9SPHI Length = 514 Score = 317 bits (812), Expect = 6e-85, Method: Composition-based stats. Identities = 110/437 (25%), Positives = 187/437 (42%), Gaps = 25/437 (5%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 +AL V++V S I Y+++Q AST K+IT A L P+F +TTTLE G + Sbjct: 60 GTVALSVRRVRDSKELIGYNARQSLPSASTLKLITTATAFAVLNPNFSYTTTLEYDGTIS 119 Query: 94 NGVLKGDLVARFGADPTLKRQD----------IRNMVATLKKSGVNQIDGNVLIDTSIFA 143 + VL G+L R DP+L +++ ++K +G+ +I G V+ D S++ Sbjct: 120 DSVLTGNLYIRGTGDPSLGSWRFSGYYDLTALLKSWSESVKNAGIRRIQGTVVGDASLYD 179 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVASYYPVTMFS 202 WP+ D+ + A +A ++ N + V G + R P F Sbjct: 180 DLTTPDTWPFGDLGNYYGASLSALNINENLYRVFFRPGKSIGMPTTVLRTDPLVPYLNFR 239 Query: 203 QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR--SEPLPLAFAVQDGASYAGAILK 260 T + Q + P LN+ LTG +P + + ++ D A +A L+ Sbjct: 240 NTVTTDAANTGDQ-VNIYGAPF-LNQQWLTGKVPLGEPANEFSVKGSLPDPAYFAAYSLQ 297 Query: 261 DELKQAGITWS-------GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 ++L + IT S G L V+ +S L +L + +S N+ A+ Sbjct: 298 NQLIRDNITVSSPPISLGGGLPATVSSTGKRVVLNQHKSPLLTELAQQTNFQSINLYAEA 357 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + R + A DA+ + + GV + I DGSGLS + M + Sbjct: 358 LLRTTAITLDKSVRSTAASIDALTTYWKSK-GVLMDGFRIRDGSGLSTVGALTADNMTGI 416 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 L + + F +P+ G G++ R G + AK+GS++GV AG+ T Sbjct: 417 LSTMGREKAFPPFYETIPIIGQTGTV--RNLARGTAAAGNIRAKSGSIEGVRAYAGYFTA 474 Query: 434 ASGQRMAFVQYLSGYAV 450 A G++M+F ++ + Sbjct: 475 ADGEQMSFCILVNKFTP 491 >UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geobacter sp. M18 RepID=C6MX86_9DELT Length = 503 Score = 315 bits (808), Expect = 2e-84, Method: Composition-based stats. Identities = 118/444 (26%), Positives = 199/444 (44%), Gaps = 22/444 (4%) Query: 23 VDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 +D + + + + V + D++ + + +PASTQK+ TA AAL LGPD Sbjct: 65 IDAILAREFLPVTTVGIKVISLRKGDTIYDFNPRLLLVPASTQKLFTAAAALSLLGPDRE 124 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 TT++ G + D L D+ + A + ++ D S Sbjct: 125 VTTSVALDAAG------GRAYLKGCGDSLLSGADLAALAAAAASKMDKGREYSLAADLSC 178 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTM 200 F + GW W+D + V++N ++ + P G A + + T+ Sbjct: 179 FDDLYRGKGWMWDDDEML----ISPLSVNQNAVTLLVQPGPGAGAPAVVTAEPHTSYYTV 234 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDL-NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + RT E + PGD N T+TG + S PL +V A + Sbjct: 235 ENLARTGT--GKEPSSIQAARRPGDRDNVVTVTGVIALGSAPLVKHASVWRPELMALTLF 292 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 +D L+ G+ + T VVA L +L++ LK SDN+ A+++ +++G Sbjct: 293 RDALRAQGVKVTSMTAAPTPA--GAAVVARVPRR-LEELVRFALKTSDNVTAESLLKLMG 349 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 PG+ +GS AVR L ++ G+ N ++ADGSGLSR+NL + TM ++LQ I Sbjct: 350 LQASGQPGSGESGSAAVRGYL-ERQGIPTENLVLADGSGLSRYNLSSAETMTRLLQAIHL 408 Query: 380 HDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 F LP+AG DG+L+ R + + +G + KTG++ GV L+G++++A G+ Sbjct: 409 DPELYRIFQQSLPVAGKDGTLKGR--MKGSCAEGNLRGKTGNMSGVSALSGYLSSAEGEP 466 Query: 439 MAFVQYLSGYAVEPADQRNRRIPL 462 +AF + YA R + + Sbjct: 467 LAFSIIIQNYAGSGRQAREVQDRI 490 >UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Geobacter RepID=B5ECV6_GEOBB Length = 495 Score = 314 bits (805), Expect = 5e-84, Method: Composition-based stats. Identities = 116/449 (25%), Positives = 200/449 (44%), Gaps = 24/449 (5%) Query: 22 NVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++D + + + + V + +++ + + +PASTQKV TA+AAL LGPD Sbjct: 58 DIDAILAREFLPVTSAGIKVVSLKHGDTIYEFNPRLLLVPASTQKVFTAVAALSILGPDR 117 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 TT+ + + D L D+ + A + + D S Sbjct: 118 EVATTVALDAAGAR------IYLKGCGDSLLSAADLATLAAAAASKLDKGREYTLAADLS 171 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 F + GW W+D + V+ N S+ + K G A + + P T Sbjct: 172 CFDDLYRGMGWMWDDDEMM----ISPLSVNHNAVSLLVKPGAKAGAPAVV---TAEPRTS 224 Query: 201 FSQVRTLPRGSA--EAQYCELDVVPGDL-NRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 + V+ L R + + + PG+ N T+TG + S P +V A Sbjct: 225 YYTVQNLTRTGSAKDESSIQASRRPGERDNVVTVTGVIALGSAPQVKQASVWRPELMALT 284 Query: 258 ILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 + +D L+ G+ + T ++ S L ++++ LK SDN+ A+++ ++ Sbjct: 285 LFRDALRAQGVKVTDMTTATTPAGATE---VARSSHSLEEMVRFALKTSDNVTAESLLKL 341 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 +G G+ AGS VR+ L ++ G+ N ++ADGSGLSR+NL + TM+QVL+ I Sbjct: 342 LGLHGSGKRGSAEAGSAVVRRYL-ERQGIATDNVVVADGSGLSRYNLSSADTMIQVLRAI 400 Query: 378 AQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 + F LP+AG DG+L+ R + + +G V KTG+++GV LAG+ T+A G Sbjct: 401 QRDPGLYRIFQESLPIAGIDGTLKNR--MKGSCAEGNVRGKTGNMKGVSALAGYATSADG 458 Query: 437 QRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 + AF + Y R + + + Sbjct: 459 EPFAFSIIIQNYPRSGRQAREVQDRIAKL 487 >UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW4_ACIBL Length = 1076 Score = 313 bits (803), Expect = 7e-84, Method: Composition-based stats. Identities = 121/518 (23%), Positives = 196/518 (37%), Gaps = 73/518 (14%) Query: 3 FSRFIIGLT---------SCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDY 52 RF I L S A S A V+E +T+ A A + + + + Sbjct: 1 MKRFRILLPAFFLATTWVSAQAPSDLAQRVEEIMTRPEFAHATFGMQFYSLKSGKVVYEL 60 Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTL 111 ++Q++ +P ST K+ T AL LG D+RF T + G ++ NG L+GD+V DP L Sbjct: 61 NAQKLMVPGSTTKLFTEGTALETLGADYRFHTRIYHTGTLKSNGTLEGDIVLVASGDPNL 120 Query: 112 KRQD------------------------------IRNMVATLKKSGVNQIDGNVLIDTSI 141 + IR + GV ++ G VLID + Sbjct: 121 SGRIQPDGTLGFENEDHSYGGVDSRGVGSDPLLVIREFAQQIASKGVKRVKGRVLIDARL 180 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTM 200 F + G + +V+ N V G A +++A V Sbjct: 181 FPQGTRELGT---------GVVMSPIVVNDNLIDVIATPGATEGAPAQLKIAPETSYVRF 231 Query: 201 FSQVRTLPRGSA-EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 ++V T GS E Y + P T TG LP +++ V D A YA +L Sbjct: 232 VNKVTTGKTGSKLEFDYSDPQPGPNGSQVVTATGSLPLGKPVGMVSYPVPDPARYAQVVL 291 Query: 260 KDELKQAGITW------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 + L+ I +P ++A S PL + +KI LK S N+ A Sbjct: 292 SEALRSQKIEVEIPANNDADFKALEPSYKPENLLAEHVSPPLSEEVKITLKVSQNLHASM 351 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 ++G + V + G+D+ +DG+G + P +++ Sbjct: 352 TPYLLGALAGHATKDIDQAGFDVEHDFLSKVGLDLTAASQSDGAGG--NAFFTPDFVVKY 409 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQ 422 L ++A + F LP+ G DG+L + G V AKTG+ L Sbjct: 410 LVHMASSKDAALFRRGLPILGRDGTLAK--IETDSPAAGHVFAKTGTYFVSDALNKNLLV 467 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 LAG++ T+ G +AF Y + +V ++ ++I Sbjct: 468 TGKGLAGYMETSGGDELAFAIYANNVSVPMDSEQAQKI 505 >UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Chromobacterium violaceum RepID=Q7NYZ7_CHRVO Length = 463 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 119/414 (28%), Positives = 187/414 (45%), Gaps = 12/414 (2%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 +A+ V APAI + + PAST K++T AAL +LGPD+R+ T L + VE Sbjct: 29 EIAVWAAPVEGDAPAITHRADAPVNPASTMKLLTGWAALNRLGPDYRWKTALLSAAPVEG 88 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 G LKGDL G DP D+ +++ +L+ G+ Q+DG +L+D F + A + Sbjct: 89 GALKGDLYWLGGGDPRFDNGDLLSLLYSLRLRGIRQLDGRLLLDKRAFGNVGGADDF-DG 147 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D + F P A + + ++ + G A + + T A Sbjct: 148 DAGRAFVVGPDAHLTNLKVAWLTFF---NDGQGARVALDPPLAGVELRAALTPGPDQPCA 204 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL 274 + D R +TG LP + V D ++AG + G SG L Sbjct: 205 DVRRFVSIDNDGRRVRVTGSLPPACDGQRAYVNVLDHDAFAGQDFSALWQALGG--SGPL 262 Query: 275 -LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 + + + + +AS QS PL L + K S+N +A T+F +G A T A Sbjct: 263 RVARGRAPDDARELASWQSQPLAVALSDINKYSNNTMARTLFLTLGRAAGG-EDTAAAAE 321 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 A+R+ L + D G + +GSGLSR + + +VL A+ FI+ LP+A Sbjct: 322 RALREELSLRGIADAGALRLENGSGLSRRERVTARLLGEVLLDAARGPYAGEFIASLPIA 381 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 DG+L+ R + ++ KTG+L V LAG+ A G+R+A V ++G Sbjct: 382 ATDGTLKKRFV----ELGPRLRMKTGTLNDVKALAGYWQAADGRRLAIVAIVNG 431 >UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN6_9SPHI Length = 457 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 102/446 (22%), Positives = 174/446 (39%), Gaps = 42/446 (9%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN-G 95 +L V + Q AST KVIT+ AL LG +F F T L G +++ G Sbjct: 31 SLTVLDSKTGNVIFSKNGQTGLPTASTLKVITSATALDLLGSNFTFKTKLYYTGEIDSLG 90 Query: 96 VLKGDLVARFGADPTLKRQD---------IRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 LKG++V G DPTL + V ++ +G+ ++G+++ D F + Sbjct: 91 TLKGNIVIEGGGDPTLASSRFEGMNEETLLNKWVYAIQNAGIKCVEGSIIGDDRFFNGNT 150 Query: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR--VASYYPVTMFSQV 204 GW W D+ + A + N V + G A + + + ++ Sbjct: 151 VPGGWIWTDIGNYYGAGVSGLNWRENSVGVQFKAGNTAGSKATLTSLTVDSSYLDIHNET 210 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 T +GS + Y R + G + + AV D A A L+ L+ Sbjct: 211 LTGSKGSGDNVYAYSAPYS---TRIYIRGTYGLDLK-KTIEIAVPDPAFDAAFQLQKSLR 266 Query: 265 QAGITWSGTLLRQTQVNEPGTVVA-------SKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 +AGI L Q++E G +A +S + D++ +KS N+ +T+ + Sbjct: 267 RAGILTENEPLTGKQLSERGETIAKDRKELDVHESPKMQDIVYWFNQKSINLYGETLLKT 326 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 IG T A +D V++ + + + G I DGSGLS N + M +++ Y Sbjct: 327 IGMYSGQKIETADA-ADMVKKFWKAKLNIPEGELNIVDGSGLSPQNRVTSLAMAKIMNYA 385 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + F LP ++ K+G++ GV G+ T+ +GQ Sbjct: 386 KTRNWYDIFYKSLPT------------------YNEMKMKSGTIGGVLGYTGYHTSKAGQ 427 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLV 463 F ++ Y + R L+ Sbjct: 428 EYTFTLLVNNYEGSGSAMRKSMFGLL 453 >UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X6E6_FLAB3 Length = 475 Score = 311 bits (798), Expect = 3e-83, Method: Composition-based stats. Identities = 97/449 (21%), Positives = 182/449 (40%), Gaps = 51/449 (11%) Query: 26 YITQLPA-GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 + PA ANL++ V +Y+ Q ASTQK+ TA AAL LG ++++TT Sbjct: 49 LLASTPAYSANLSVYVAD-ENGEFVYEYNGNQGLSTASTQKIFTAAAALETLGTNYQYTT 107 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIR---------NMVATLKKSGVNQIDGNV 135 T G + NG L +L + DPTL ++ L++ G+ ++ G++ Sbjct: 108 TASYSGTISNGNLSENLYIQSNGDPTLGSWRYDGYKPENFRNKLIEALRQKGIRKVSGDL 167 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 +ID S F GWPWND+ + A N F +++ G + ++ Sbjct: 168 VIDDSYFNFQTVPGGWPWNDIGNYYGAGVWGVNWRENQFDLNMNGKEMKGQNVDLPNVAW 227 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 V L G + Q D+ ++G LP + + ++ A + Sbjct: 228 --------VNDLKTGGSSDQSLIYTAPFSDV--AYISGTLPA--KNITVSGATPNPPLTL 275 Query: 256 GAILKDELKQAGITWSGTLLRQT---------QVNEPGTVVASKQSAPLHDLLKIMLKKS 306 G +K +AGI ++G + + V ++ +S L ++ ++KS Sbjct: 276 GMEIKTWFNEAGIEFNGKVTTASMQQINGEKIPVAPKSNIILEHKSPTLDKIVYWFMRKS 335 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 N +T+ + +G + N G++ AG +++ + + G+ ADGSGLS N ++ Sbjct: 336 VNFYGETLIKTLGKEKKN-EGSFDAGIAYLKEFWKGK-GISPAMINFADGSGLSPQNYVS 393 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 +Q L + + F P + K+G+++ + Sbjct: 394 ARAEVQSLLWSRKQPWFNAFFEGFPT-----------------QTNSMKMKSGTMKDTKS 436 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQ 455 AG+ T+ G++ F ++ Y + + Sbjct: 437 FAGYHTSKDGKKYVFAIIINNYQGSNSSE 465 >UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU5_SYNFM Length = 430 Score = 310 bits (794), Expect = 8e-83, Method: Composition-based stats. Identities = 99/418 (23%), Positives = 171/418 (40%), Gaps = 17/418 (4%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 ++ S++ +PAS KV+T+ AAL L P ++F T+L ++G L + Sbjct: 8 KVIWEFRSEEPLVPASLVKVLTSYAALKYLKPQYQFRTSLYALDEPRGDTVRGHLWIKST 67 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 D L +++++M LK+ G+ ++G V D S F + ++ +A Sbjct: 68 GDIFLLGENLKDMALRLKERGIRFVEGGVFADNSFFNPQAEQIC-LDERCASSYNPVVSA 126 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR-GSAEAQYCELDVVPG- 224 ++ N + ++ K G + S++P + QV L R S +A L V Sbjct: 127 TSIEFNTIAFTVSGGAKSGTAPQV---SWFPPGDYVQVDNLARTASKKAARVGLAVRSAG 183 Query: 225 ----DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV 280 RF +TG + R V D AS+ K+ L++ GI G V Sbjct: 184 MTGTGRERFRVTGKVGPR-RNFEYRLNVDDPASFVARSFKEVLRREGIEVRGADAGPGTV 242 Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 + + +S L D++ + + S+N +A+ + R +G PGT G + VR+ L Sbjct: 243 PPGAKPLVTHESRALGDIIYGLNRYSNNFMAEMLLRSLGGLVLGPPGTVDKGVELVRKSL 302 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGSL 399 GV + GSGLSR + +L + E +FIS G +G+L Sbjct: 303 VG-LGVPPHEVQLKSGSGLSRECRASARAFCTLLANAYADPSIEPDFISSFATNGSEGTL 361 Query: 400 QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 + R +V KTG+L+ V AG++ L+ + +R Sbjct: 362 RRRICKPDV----EVRGKTGTLRDVVGFAGYVAGCGRGPYVVTVILNDVSNIGEARRA 415 >UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAN1_9DELT Length = 662 Score = 309 bits (793), Expect = 1e-82, Method: Composition-based stats. Identities = 107/465 (23%), Positives = 182/465 (39%), Gaps = 55/465 (11%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 ++ I + A +++ V+ + ++ DY + PAS KV+T+ AAL LG DF Sbjct: 117 ELEAIIADVDERARVSVHVRDLSSARVLFDYDGDRALNPASNHKVLTSAAALDLLGEDFE 176 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T + G +L G DPT+ + +R + A + + ++ID + Sbjct: 177 FETRVLRVGA--------ELYLVGGGDPTIDGEALRELAAQVAERVTVNELERIVIDDTA 228 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F PG+ + AP A + N +++Y A + Sbjct: 229 FTERQFGPGYSTGGDGVSYMAPSGALSANFNTVEITVYPASGTKTPLVRLEPDSTHAYVV 288 Query: 202 SQVR-----TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 ++ R +L ++ + E D R + G LP+ S V D + G Sbjct: 289 NRSRYSSSASLAVSTSAIAWPEPGPRHHDFTRVEIEGGLPRGSRGYRFRRRVADPGMFTG 348 Query: 257 AILKDELKQAGITWSGTL-LRQTQVN--------------------------------EP 283 L A ++ S L +R+ + Sbjct: 349 GAFARAL--ADVSHSEALPVREGRAPVVEELDELDVLELLDSQDDGGGLPRSVHRSEGPD 406 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 +VA ++S PL +++ +L S+N IA+ + R +G PG+W G +R + Sbjct: 407 VELVALRRSPPLSEIVAGLLAYSNNFIAEQLLRTLGWKTTGQPGSWDNGGAVLRGYW-EA 465 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ-HDNELNFISMLPLAGYDGSLQYR 402 G +GSGLSR ++ A +++VL + H+ LP+AG G+L R Sbjct: 466 VGNAPEQLRFENGSGLSRVGRVSAAGLVEVLASSYRTHEGRPALFEALPVAGSKGTLGGR 525 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLS 446 +V AKTG+L GV L G IT SG+ +AF ++ Sbjct: 526 LLRSGQ----RVRAKTGTLDGVSGLTGVITAESGEPQVAFSILIN 566 >UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Methanosarcina acetivorans RepID=Q8TPE4_METAC Length = 568 Score = 308 bits (790), Expect = 2e-82, Method: Composition-based stats. Identities = 109/510 (21%), Positives = 211/510 (41%), Gaps = 72/510 (14%) Query: 21 ANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A+V E + A ++V+ + + ++M +P ST K+ T AAL +G D Sbjct: 78 ASVTEIMNDTKYDHAFWGILVEDLETGEVVYQLNPEKMFIPGSTTKLYTGAAALDIIGAD 137 Query: 80 FRFTTTLETKGNVE-NGVLKGDLVARFGADPT---------------------------- 110 +RF T + +GNV+ +G L GDL+ D T Sbjct: 138 YRFETPIYARGNVDSSGNLNGDLILVASGDLTMGGRTTPDGKIDYTDIDHSYANSIGNAI 197 Query: 111 LKRQD----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 L D + + + +G+ + G+V+ID +F + D ++ Sbjct: 198 LTTPDPLSGLDQLAQQVSAAGIKSVSGDVIIDDRLFDKINPP------DSANDYT--LTP 249 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 +++ N + + A +PG A + + P T + + + +++ G Sbjct: 250 IVINDNLIDIMVKPA-QPGMAAEV---DWRPQTAAYAIEADVVTTDANETARIEISTGGP 305 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL--------LRQT 278 ++G +P + + + V D +S+A ++L + L++ G+ + ++ L T Sbjct: 306 GIINVSGQVPAGEDTIVQTYTVDDPSSFARSLLIEALERQGVKVNASVKGNNPADLLPAT 365 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 VA S P + LK+++K S NM AD++ ++ ++ G R Sbjct: 366 TNYSEFERVALLTSLPFSENLKLIMKVSQNMQADSLLPLMAVKEGKR--SFWDGLIIERS 423 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L ++ G+D+ I+DG G S + + P T + +L+Y++ ++ + LP+ G DGS Sbjct: 424 FL-EKTGIDLNAVSISDGRGNSPADYMTPRTTVDLLRYMSSGNDSQVYRDALPILGVDGS 482 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQ--GV---------YNLAGFITTASGQRMAFVQYLSG 447 L G ++ GKV AKTG+ V L G++ T+ +++AF Y++ Sbjct: 483 LATSVG-PESPAKGKVQAKTGTTAKYDVVNDRLILCSQALGGYMNTSEDRKLAFAIYVNN 541 Query: 448 YAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 P + + + IY+ N Sbjct: 542 V---PVKDVKEMKQVSNDLGSICEAIYEEN 568 >UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisella RepID=Q0BKW3_FRATO Length = 464 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 105/443 (23%), Positives = 194/443 (43%), Gaps = 21/443 (4%) Query: 10 LTSCIAFSVQAANVDEYITQLPAG-----ANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 + SV + +++ + A +A+ + + + ++ + +PAS Sbjct: 17 VFIAYPLSVNSIELNQVLDNSIEQNNLQSAQIAVKIIDSEKNTVILSKNADKNFIPASNT 76 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++T +A L+ LG DFRF T L + N + +L F DP+ R+D+ ++ +L Sbjct: 77 KLLTGIAGLLFLGKDFRFETKLYYD-KINNQSID-NLYIEFSGDPSFTREDLHKLLISLH 134 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 K + I + F D + AP + ++ N ++ L Sbjct: 135 KKNIKNIKNIYFV-NRYFEGRDTPINQSNTSSIFGYGAPSSIYNLNENAITLQLIPQSN- 192 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 S + + + S E N L GCLP S Sbjct: 193 -----TFEVSQSVGEKINFINKIFIASVEQLKTCQFNAYYKDNTLVLNGCLPSNS--YTF 245 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 +FA++D + EL Q I+ + ++ + T++A +SA L LLK M Sbjct: 246 SFAIEDPQQQMQQAVLAELAQLKISLDTQIKTTNKLPDNLTLLAKHKSADLTQLLKHMFV 305 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 SDN+ A T+ R IG+ +N G+ +G +A+ +IL+ + +D + + DG+G+S +NL Sbjct: 306 TSDNLYAQTITRTIGY-YYNQVGSIVSGKNAIIKILKTKLNLDTDSIQLEDGAGMSENNL 364 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 ++ ++ +LQ I+Q+ N +LP+ G G+L+ R + GKV AKTG+ V Sbjct: 365 LSANFIVSLLQKISQNKNFELLKCLLPIYGETGTLKNR---SSKLLKGKVFAKTGTETTV 421 Query: 425 YNLAGFITTASGQRMAFVQYLSG 447 L+G++ A+ ++ F ++ Sbjct: 422 VALSGYLY-ANNKQYIFSILVNN 443 >UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QDN4_PSYCK Length = 707 Score = 305 bits (782), Expect = 2e-81, Method: Composition-based stats. Identities = 89/446 (19%), Positives = 173/446 (38%), Gaps = 50/446 (11%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 +P +++ PAST K++ + AL LG DF + T + G + L GDL+ + Sbjct: 244 SPLLNHQPDIARTPASTMKLVPSFIALDILGADFVWHTRVYHTGIIIGNTLLGDLIIQGS 303 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP + + ++ ++ +K +G+ IDG++++D++IF K P N + ++A P Sbjct: 304 GDPKMTHERLQQLLYKVKAAGIRHIDGDIIVDSTIFNHVTKDPAAFDNAPLRPYNASPDG 363 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 +V+ + + Y + S++ P +A+Y Sbjct: 364 FLVNFSTIGIQSYPLNN-AQAQLTYTPQLADYKLPSKINIRPSACGQARYSLAPQW--QA 420 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT- 285 + T LP A D +A ++K + + T +G ++ Q + Sbjct: 421 TQLTFDTSLPDNCGNHAFYVAYPDAKDFAARVIKAKWQALDNTLTGNVVAQETPYKNKKS 480 Query: 286 --------------VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH----------- 320 + S S L + + S+N++ + V IG Sbjct: 481 ISARGLAALPMSPLPIVSYPSLNLTQQIYDINHFSNNVMTEQVALSIGAYHKPKDETVNP 540 Query: 321 ----------------ARFNVPGTWR--AGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 +F P T A + + + + + +GSGL R Sbjct: 541 TINKNVDKAINSQHSLYQFGKPATTSYPAALQTINEWWQTH--LSTPPPHLTNGSGLCRD 598 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS-LQYRAGLHQAGVDGKVSAKTGSL 421 I+ A + ++L Y H + +++ L +AG G+ L + L ++ G+ KTG+L Sbjct: 599 CTISAANLSELLTYAYAHPSFNAYVNSLGIAGVSGTILTHSERLPESNAIGRAWIKTGTL 658 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSG 447 V ++AG++ SGQ V ++ Sbjct: 659 NNVTSMAGYVKGLSGQDYVVVGLINN 684 >UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4C4A Length = 520 Score = 304 bits (779), Expect = 4e-81, Method: Composition-based stats. Identities = 117/506 (23%), Positives = 200/506 (39%), Gaps = 68/506 (13%) Query: 10 LTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + + A A E IT P A+ +++ + M PAS K+ Sbjct: 19 VPAPAAPPDGLAEKLEAITGAPDYKHASWGILIVDAKTGGTVYARNPDAMLAPASVTKLF 78 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------------ 115 T AAL+ LGPD + T + +G V G L+GDLV D L + Sbjct: 79 TCAAALVTLGPDHKRETAVYQRGIVLKGTLRGDLVLVASGDLMLGGRTKDGRTVFKDKDH 138 Query: 116 --------------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 + + +K +G+N+I+G VLID +FA + G + Sbjct: 139 TYANGGFGDCEVTDTDPLAGLNALAKQVKDAGINEINGEVLIDDRLFA-RTRGSGSGPD- 196 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ 215 +V+ N V + K G A + + P T + +A Sbjct: 197 -------AVTPIVVNDNAIDVVVTPGEKEGAPATV---TMRPETSLYTMDATVSTAAAGA 246 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 + ++P +F + G +P +P F V + AS+A A+ + L++AG+ +L Sbjct: 247 TANIQLIPIGATQFAVRGTVPVGGKPQLRVFNVDEPASFARALFVEALRRAGVRAQCAVL 306 Query: 276 RQTQV-------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT 328 R V E VA+ SAP D + + LK S N+ A + ++ A+ T Sbjct: 307 RPGAVLLPPKADYEKLPKVAALASAPFKDTVTVTLKVSHNLYASAIPCLLAVAQG--AST 364 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 AG R +L+ GVD G+G ++ + ++ +Q+LQ +++ + + Sbjct: 365 LDAGLKEERAVLKD-LGVDTNAISFGGGAGGAQSDYVSARATVQLLQGMSKRSEWDAYKA 423 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQGVYNLAGFITTASGQ 437 LP+ G DG+L A + GK AKTG+ L LAG +TT +G+ Sbjct: 424 ALPILGVDGTLSD-AVKDDSPARGKAHAKTGTLLWYDAANERFLLKSKALAGSLTTKNGK 482 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLV 463 + F ++ + +R ++ Sbjct: 483 ELLFCVMVNNVPLPKGVISSREGKML 508 >UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porphyromonas gingivalis RepID=Q7MUR9_PORGI Length = 510 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 104/475 (21%), Positives = 194/475 (40%), Gaps = 24/475 (5%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAG--ANLALMVQKVGASAPAIDYHSQQMALPAST 63 F++ + S Q + I + + + + +++ + + + PAS Sbjct: 30 FLLFAILGQSLSAQDRGAIDIIKKAERQTKSRIGVEIRRCRDDSLFVSNRRDEQFCPASL 89 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR------ 117 K++T+ + L G + F T + G + G+L G+L+ + G DP+L + Sbjct: 90 VKLVTSASILRLRGTEIPFYTGVGMDGKIRKGILDGNLIIKGGGDPSLASNYLPTDSGRF 149 Query: 118 --NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 +V +K+ G+ +I G++++D S F W D F A ++ N Sbjct: 150 AYALVDAVKQWGIKEITGDIIVDASAFDIEGVNDSWLDEDKGNYFGAGVYGFNINDNRID 209 Query: 176 VSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 V L + + +R+ +P V +++ + RG A G + TLTG Sbjct: 210 VILATGKAGSEAHILRIEPPHPEVRWENRIEVIHRGKDTAG----CYGEGLDLKRTLTGV 265 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 LP L + D A Y A K L AG G Q + +S P Sbjct: 266 LPTNIVSYRLKTDLPDPALYGAAWAKGLLSAAGTLCQGKCRASYQAVPITQELLIYESLP 325 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIG--HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L L+++M +S N A+ + + ++ + T G +R Q G+ + Sbjct: 326 LDSLVRVMNFRSLNHFAEAFVKQLAPLASKNHRGNTTERGLSVIRNYWTSQTGLQHTDIS 385 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELN--FISMLPLAGYDGSLQYRAGLHQAGV 410 ++DGSGLSR N +P + Q+L + + + F++ LPLAG +G+++ Sbjct: 386 LSDGSGLSRKNRFSPNALSQILIDMISRGDLVTTSFLNSLPLAGREGTVKNFMKDEAIEA 445 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 K+GS++GV AG++ G+ + V + ++ +R L+ F Sbjct: 446 ----YLKSGSMKGVLGYAGYVR-FQGEWYSVVLMGNDFSSSAPVRRAFSDFLLSF 495 >UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VN35_ALCBS Length = 502 Score = 303 bits (775), Expect = 1e-80, Method: Composition-based stats. Identities = 107/455 (23%), Positives = 181/455 (39%), Gaps = 14/455 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMAL 59 + + G + A V E L A +LA+ + A ++ Sbjct: 23 LLLGTLLAGSAQADIPAPVMAPVLEVAESLELAETDLAVASIPLDGPGKARFMNADIPLN 82 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 P S KVIT AAL LGP F++ T L T G +E L G+L DP L + + + Sbjct: 83 PGSIMKVITTYAALELLGPTFQWHTRLYTDGTIEGETLSGNLYFVGSGDPKLTEERLWLL 142 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW--NDMTQCFSAPPAAAIVDRNCFSVS 177 + L+ G+ I G++++D S+F + + ++ F P + + N + Sbjct: 143 LRELRAMGITHITGDLILDGSVFNLPNGITAFNDDGDNPNAPFLVEPNGLLTNLNVLRIR 202 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY---CELDVVPGDLNRFTLTGC 234 + + + + + +Q+ G +Y E T+TG Sbjct: 203 ARADNRGIHTWT--EPALNGIHINNQLVLREYGHCPRRYQFDYEPTTRDDGSISITVTGV 260 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 LP + A Y GA+L +Q G T SGT+ + ++ + S Sbjct: 261 LPVGCSTSSYLSLLSQPA-YTGALLSSLWQQLGGTLSGTIREGLRPRADTELLVTTSSRD 319 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHA--RFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L +++ + K S+N++ VF +G + A +R L G+D + + Sbjct: 320 LVTMVRDINKWSNNVMVRQVFLTLGAKHRQPGDKDDLAAAEREIRAWL-AHKGIDSRSMV 378 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 +G+GLSR I M Q+LQ + I+ LPL DG+++ R G A + G Sbjct: 379 FENGAGLSRIERITARQMAQLLQQAWESRFAAELIASLPLVAMDGTMRRRLG--NANMAG 436 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 KTGSL+ V ++AGF A V ++ Sbjct: 437 MGHIKTGSLRNVRSIAGFTRDEDNTTWAVVAMVNN 471 >UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Bacteria RepID=C3J9L9_9PORP Length = 483 Score = 301 bits (772), Expect = 3e-80, Method: Composition-based stats. Identities = 109/446 (24%), Positives = 193/446 (43%), Gaps = 28/446 (6%) Query: 17 SVQAANVDEYI--TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + A VD I ++ A + VQ V Y +++ PAS K++TA AL Sbjct: 28 PLALARVDSLIRASEESGVARYSFAVQDVSQDTLWAAYRPEELCTPASITKLVTAATALE 87 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN--------MVATLKKS 126 LG D+ F T L +G ++ GVL G+L+ DP++ + ++ T++ Sbjct: 88 SLGADYSFCTELYMEGELKRGVLYGNLLVIGSGDPSIDSKFFEQDKERWQQSVLQTVQAK 147 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +I+GN++ID S F P W +D ++A + N + + G Sbjct: 148 GIRRIEGNIVIDASRFERMGIHPRWAPDDRGDYYAAGVYGFNLYDNWLDLYFATG---GV 204 Query: 187 MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 IR+ YP + + + + + Q E D +R TL G LP E + +A Sbjct: 205 EDSIRLVGTYPKGVQLALDNRLKVNCKTQGWEGDGANLVEHR-TLLGTLPCNRESVRVAI 263 Query: 247 AVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 + +A +L+ L+ G+ G R + P T++ S L DL + M + Sbjct: 264 DLPHPPLHAARLLRATLEGQGVEILGQEEARFESSSHPRTLIGRYYSPSLRDLCREMNYR 323 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN-TIIADGSGLSRHNL 364 S N A+ +F+ + T A ++IL GV + + DGSGL+R N Sbjct: 324 SLNHYAEALFKALVKENG---ATSNAAWLREQEIL-SNWGVTLSPKAHLYDGSGLTRANR 379 Query: 365 IAPATMMQVLQYI---AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 ++ M+ +L + A+ + F LP G +G+++ + + + K+ K+GS+ Sbjct: 380 LSAQDMVALLVGVSTKARGNTLDAFAQSLPRVGREGTVK--SFMPGTSL--KLYCKSGSM 435 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSG 447 +GV AG++ + A +G Sbjct: 436 RGVQTYAGYLYYQR-RVYAVALLANG 460 >UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Limnobacter sp. MED105 RepID=A6GSV9_9BURK Length = 467 Score = 301 bits (770), Expect = 5e-80, Method: Composition-based stats. Identities = 106/431 (24%), Positives = 173/431 (40%), Gaps = 28/431 (6%) Query: 49 AIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 A + S Q+ PAS KV T AL +L +RF T +GVL G L + D Sbjct: 52 AYAHGSSQLVNPASVAKVFTTALALQKLESTYRFKTGFHAVSEPVDGVLAGPLYIKGSGD 111 Query: 109 PTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND-----MTQCFSAP 163 P D+ + L+ GV+ I+G V++D S FA + G D + + A Sbjct: 112 PAFLSADLWASLRQLRTKGVDIINGPVVLDDSAFAEQLPSLGLAEEDAFDDAPHRAYHAQ 171 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 P A +++ S+ L + + + S++ L G A + V Sbjct: 172 PDALLLNFGAMSIDLKINE--NTVLVVPEEAPKDWAFVSEI-NLTGGGCGAWKNGMSVDF 228 Query: 224 GDLNR---FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT---LLRQ 277 R T+ G P+R L V + +++ + G ++G + + Sbjct: 229 AKAGRDVVVTVKGNYPRRCGQSRLPIRVPAQDWLWESWVQEIWLELGGKFAGPQGGQVIK 288 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVR 337 + + PL DL+K + K S N++A + + GT A + ++ Sbjct: 289 GVTPANTIALYTHYGKPLSDLIKQINKWSSNVMARHLELAVA-------GTPEAFNVQLK 341 Query: 338 QILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDG 397 L+QQ G+ + +GSGLSR I + + L+ +A + +F++ P AG DG Sbjct: 342 DWLKQQ-GISSNDWFFENGSGLSRDTRIDAKGLAEFLRNMAARSDFPDFLASFPRAGADG 400 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRN 457 +L R VDG KTGSL GV +L G++ GQ A + + D Sbjct: 401 TLHRRV----TNVDGFAYLKTGSLNGVRSLGGYLRDREGQLWAVGVLV--KSPRAYDSWG 454 Query: 458 RRIPLVRFESR 468 L+ F R Sbjct: 455 PMESLLEFLYR 465 >UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESR7_SORC5 Length = 524 Score = 299 bits (765), Expect = 2e-79, Method: Composition-based stats. Identities = 114/459 (24%), Positives = 199/459 (43%), Gaps = 16/459 (3%) Query: 21 ANVDEYITQLPA-GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A ++ +T + G + ++ V + A + + + PAS K+ TA AAL LGP Sbjct: 75 AQIETLVTDVRRLGGRVGVLALDVASGATLAAFDQRGLYNPASNAKLFTAAAALRLLGPS 134 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 +R+ T L G+ NG + +LV R DP+L+ +D+ M L+ SGV ++ + ID Sbjct: 135 YRYLTGLY--GDASNGTVA-ELVLRGSGDPSLRTRDLWEMARALRASGVRKVA-AIAIDQ 190 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 F + P + P AA + K G A + + Sbjct: 191 GYFDTRYVPPAFEQQPEEWAAFRAPVAAASLNANALLFTVRPSKAGQAASVAIDPPGFAV 250 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + V T RG+ E L+ G L+G +P+ + LA V D L Sbjct: 251 LQGTVTTARRGAPEKLGVRLEP-NGQRLVAHLSGHIPEGGRAVSLARRVDDPRLVVAYAL 309 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 K+ L + G+ SG + + ++ + +SAPL +LL + K SDN A+T+F+ + Sbjct: 310 KEMLLEVGVDVSGEVRLGGE--RQKRLLVAHRSAPLGELLSALGKDSDNFYAETIFKTLA 367 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + PGT ++ V + LR+ + ++ +GSGL +P ++++L+ Sbjct: 368 AEKRGRPGTAEGAAEVVGETLRELDAFG-QDVVLRNGSGLFDAARASPEAIVRLLRAALL 426 Query: 380 HDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ- 437 +F + L + G DG+L+ R + + AKTG+L V L+G+I G+ Sbjct: 427 DPALGADFTAQLAIGGVDGTLRSR--FRGWSKERAIRAKTGTLASVVALSGYILAPPGRP 484 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 +AF S P R + F L +++++ Sbjct: 485 PIAFAVLASDV---PGKIDPARKAIDHFVESLADELWKD 520 >UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Synechococcus elongatus RepID=Q31LV5_SYNE7 Length = 449 Score = 296 bits (759), Expect = 1e-78, Method: Composition-based stats. Identities = 107/451 (23%), Positives = 185/451 (41%), Gaps = 21/451 (4%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + + A ++ + Q ++ + + Y + + +PAS QK++T +AA Sbjct: 5 SLCPAALPARLEALLRQ-DRSVRWSIAIADLD-GRSLFRYRAAEALIPASNQKLLTTIAA 62 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L +LGPD R T L + + + L+ DP+ R I + AT+ ++ + Sbjct: 63 LNRLGPDARLQTRLWLQPSRQ------TLIVEGAGDPSFDRAGINALAATVPS---DRYN 113 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFI 190 + +D S W D Q + AP I N ++L +P + + Sbjct: 114 QLIGLDDPA--SSYWPAAWSGLDRLQGYGAPLNRLIFLENAHQLTLQPRSLGQPLGVLWE 171 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + ++ RT+ S A++ LD P T+ G L SE +A A Sbjct: 172 DPLDRQRWQVRNRSRTVS--SQAAEFINLDRDP-QRPILTVAGQLRAGSESEAVAIAATQ 228 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 L+ L AG + S L+ + ++ + +S PL +L++ + S N+ Sbjct: 229 PGQRFLEALQIRLGTAGSSISTVSLQTNWPSGDRILLTTVESPPLRELIRTTNEDSQNLY 288 Query: 311 ADTVFRMIGHARFNVPG-TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ + R IG + P RA A Q G+ ++ DGSGLSR N ++ T Sbjct: 289 AEALLRWIGRSGQPDPVRDRRAADQAELGRALQAIGISTTGLVVDDGSGLSRRNRVSAQT 348 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 +++ L + Q LP+AG G+L+ R + + G+V AKTG L G L+G Sbjct: 349 LLEALLWQVQQPTNQALRDSLPIAGSSGTLRRR--FANSPLRGRVQAKTGFLTGAAGLSG 406 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 FI + +AF + R R+ Sbjct: 407 FIDLPNYGPIAFSILANQPNATSLTSRIDRL 437 >UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHU7_9SPHN Length = 480 Score = 296 bits (758), Expect = 1e-78, Method: Composition-based stats. Identities = 110/469 (23%), Positives = 196/469 (41%), Gaps = 44/469 (9%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 A A +++ + Q P G L+V + AP + + +PAS K+ T A Sbjct: 22 APPPLLAGIEQQLEQGPEGTRYGLLVATLD-GAPVLAIAPDERFIPASNTKIFTTATAYA 80 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD------PTLKRQDIRNMVATLKKSGV 128 L R +G + +G+++ D P + + + Sbjct: 81 DLPALDR-----AAQGTGVR-IDQGNVILEGRGDARLSSAPDCTVDCLATLADAIAAR-- 132 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 + +V+ D S + PG WN++ + +A +D N + ++ G Sbjct: 133 TRRVRDVVGDDSWYPDERWGPGMSWNNIQSRYGTGISALTLDDNHLTATIAPG-TIGAPP 191 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 ++ + YY T+ +++ T+P + + D P LTG + + P L F+V Sbjct: 192 AVQASGYY--TIDNRIVTVP---GKGEAIVADRAPNGRL-VRLTGTIGADASPETLHFSV 245 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA-----------------SKQ 291 D A YA L+D L G+ +G + + + P A Sbjct: 246 DDPAHYAAWRLRDLLVARGVIVTGDIRTRHRSLSPADDPAIRGGAPAARPPAASLLAQLP 305 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 + PL D ++I+ K+S N+ AD + R + A+ + G+ G A L QAGV+ + Sbjct: 306 ALPLADDMRIINKQSQNLHADLMLRRVARAQGS--GSIADG-QAALDRLMGQAGVNKASY 362 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 ADGSG+S +N ++P + +L +IA+ + LP+AG DG+L+ R ++ Sbjct: 363 SFADGSGMSSYNRVSPRAAVTLLAWIARQPWGAAWRDTLPIAGQDGTLRNR--FKGTVLE 420 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 GK+ AKTGSL L+G++ T SG+ + F + Q + + Sbjct: 421 GKLFAKTGSLNASRALSGYLITRSGRTLVFSALANDMPDGTDAQASAAV 469 >UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Rhodobacteraceae RepID=Q2CEY9_9RHOB Length = 516 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 113/461 (24%), Positives = 183/461 (39%), Gaps = 27/461 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 ++++ + +++ V + Y + + PAS K +TAL AL LGPD+R Sbjct: 58 SLEQIVENSRVLGSVSAAVADIETGELIEGYAADEGLPPASVTKAMTALYALETLGPDYR 117 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 FTT L G V GVL+GDL G DPTL ++ ++ LK +G+ ++ G L+ Sbjct: 118 FTTRLVALGEVREGVLEGDLALVGGGDPTLGSNNLGDLAKALKAAGITEVAGRFLVWGGA 177 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS-YYPVTM 200 + + + ++ + ++ N + + D+ V+ Y P Sbjct: 178 LPHEHEIDTDQLDHLG--YNPAISGLNLNYNRVHFAWARSGSGYDVTMEAVSEGYAPAVA 235 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 S++ R Y D D++ +T+ Q + V++ A YAG + + Sbjct: 236 TSRMTVEDRTLPVYTYASRD----DIDEWTVAR--RQLGDGGARWLPVREPALYAGDVFR 289 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + GI L + GT +A SAPL +L+ ML S N+ A+ V Sbjct: 290 TIARSEGIELDAAELVEEAP--EGTEIARHDSAPLVTILEEMLLYSTNLTAEVVGLSATR 347 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 P + A + A+ LR GV D SGL + I M+++ Sbjct: 348 ELHGRPDSLLASAQAMNDWLRDTYGVTSA---FVDHSGLGDRSRIGAGEMVKMFVAPGVM 404 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 D P+ L+ AG G V AKTG+L V L G+ITTA G+ +A Sbjct: 405 DKLR------PILKRH-VLKDDAGAPIDGYPATVRAKTGTLNFVSALGGYITTAEGKTLA 457 Query: 441 FVQYLSGYAVEPA------DQRNRRIPLVRFESRLYKDIYQ 475 F A + + P RL +D+ Q Sbjct: 458 FSIICGELEAREAGEASGDEIPDGARPWNARARRLQQDLLQ 498 >UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VVH9_9PROT Length = 471 Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats. Identities = 106/470 (22%), Positives = 187/470 (39%), Gaps = 45/470 (9%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 Q AG + V + I + S++ +PAS K+ AAL L+ Sbjct: 5 QALAGLRYGISVTDLD-GNVLIAHRSEERFMPASNAKLFVTAAALAAAAELSAVERGLQV 63 Query: 89 KGNVENGVLKGDLVARFGADPT------LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF 142 + L L DPT + + + + SG+ +I+ +++ D F Sbjct: 64 MSVRGSSGLP-SLTLVGRGDPTVGFGPGCEMPCLETLAEAVADSGITEIE-DIVGDDRWF 121 Query: 143 ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFS 202 A + GW W+D+ ++ ++ V+ N + + + PG A ++ A + Sbjct: 122 ADERRPLGWSWDDLKFGYATSISSIAVNDNILPLRVRPSESPG--AQVQTAWLDAGDGYF 179 Query: 203 QVRTLPRGSAEAQYCELDVVPGDLNRF-TLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 ++ + SA + L + + R L G +P S + L V D A A + Sbjct: 180 TLQNQAKTSASSGELALRLERREGERAARLYGEMPSGSRSMTLDLGVDDPAHLAVWYFEQ 239 Query: 262 ELKQAGITWSGTLLRQTQ---------------------------VNEPGTVVASKQSAP 294 LK G+T G L + + V G V+AS + P Sbjct: 240 ALKAEGVTVQGELRSRHRALQYTDETIKADLDDPDSPKTCRVSPPVKSDGVVIASLPATP 299 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 + D++ + + S N+ A+ + R +G + G + + L GV + A Sbjct: 300 IRDIVNTINRDSQNLYAEVLLRQLGWIEGT--ASSFCGLLHIERFLND-VGVPRSSYDFA 356 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-GSLQYRAGLHQAGVDGK 413 D SGLS +N + PAT+ +L+Y A D + LP+ G G+L+YR ++ Sbjct: 357 DASGLSSYNRVTPATITALLRYAAAQDWGDAYRESLPVGGAPIGTLKYR--FRGTALENN 414 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V AKTG+L V L+G++ SG+ + F ++ +E R L+ Sbjct: 415 VFAKTGTLNHVDALSGYLVAQSGKVLVFSIIVNDRPLESLSAMERIESLL 464 >UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=beta proteobacterium KB13 RepID=B6BV24_9PROT Length = 460 Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats. Identities = 98/482 (20%), Positives = 202/482 (41%), Gaps = 28/482 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M II A+S + A ++ Q + A ++ + + + Sbjct: 1 MIRFFLIISFFVTTAYSQELAIKNKINPQ-----DFAYSIKNISTGES-WSKDADKSFNF 54 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS K++TA AL +LGPDF+F T + ++ L GDL+ + DPTL ++++++ Sbjct: 55 ASVNKLVTATIALDELGPDFKFRTLFFSSKQIKENTLAGDLIIKGEGDPTLSIENLKDIF 114 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ-CFSAPPAAAIVDRNCFSVSLY 179 LK G+NQI GNV +D S F +D++ ++ P + +++ + Sbjct: 115 YRLKARGINQITGNVFLDDSYFKLQPNREY--IDDLSYRAYNVQPKSLLIEAGAIEIQFL 172 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY-CELDVVPGDLN-RFTLTGCLPQ 237 + +++ + + + ++ + + + +V+ D + + +L G + Sbjct: 173 --NQDNNVSIYNKPFIEGIEVVNNLKITKEACEDWKSKIQPEVIFTDESMQISLNGSFSK 230 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP---GTVVASKQSAP 294 + + L D Y + + L + I ++G + +Q +E ++ S P Sbjct: 231 KCKNKSLYLNALDQDEYMKVAISNILDEVEIEFAGEIQKQGFADEELNSFVLLDEHFSDP 290 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L+ L+ M K S N+ + + + D + ++ G+ I Sbjct: 291 LNQLMYQMNKYSLNLFSRNLALTAMKQKTEFDAD-EFNVDIYFKSWFEKKGISANEFFIE 349 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 +G+GLSR + ++L +I + D + IS LP+AG DG+L+ + + Sbjct: 350 NGAGLSRSSHANTFLFQEILVFIEESDWKSEIISSLPIAGIDGTLK--SMFKEKSFSNAT 407 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIY 474 KTG L+ V+ L+GF+ ++ G+ L+G + ++F + +Y Sbjct: 408 HLKTGRLKNVFALSGFMKSSKGEEYIVTFVLNGP---------QYQSFLKFIEQSLDYLY 458 Query: 475 QN 476 Q+ Sbjct: 459 QH 460 >UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRR0_9FLAO Length = 457 Score = 288 bits (737), Expect = 3e-76, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 183/453 (40%), Gaps = 49/453 (10%) Query: 14 IAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 IA + A D + + L+ V +Y + ASTQK+ TA AAL Sbjct: 20 IAQKLDKATKDLMDSSGAISSGLSFYVSD-ENGNLIYEYQGNKGLSTASTQKIFTAGAAL 78 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR---------NMVATLK 124 LG ++ +TTT GN+ G L G+L DPTL ++ +K Sbjct: 79 ETLGKNYTYTTTSSYSGNISAGTLNGNLFISSNGDPTLGSWRYEGYKPENFKKKLIDAIK 138 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 SG+ +I G+++ID S F GWPW+D+ + A N F +++ Sbjct: 139 NSGITKISGDLVIDDSYFDHQTIPGGWPWDDLGNYYGAGVWGINWKENQFDININGTDFK 198 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + YP+ + L G + Q D+ + G LP + + + Sbjct: 199 --------SFSYPLEGVKWLNDLKTGGSSDQSLIFTAPHSDV--ALINGMLPSG-KTVTV 247 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT---------VVASKQSAPL 295 + + + A +K LK++GI SG + +Q+ G ++ + QS L Sbjct: 248 SGSTPNPPLQLAAEIKQWLKESGIELSGKAVTNSQLEIDGKQALEALKNNIILTYQSPTL 307 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 ++ L+KS N+ +T+ + +G + +++G +++ + + G++ AD Sbjct: 308 DKIVYWFLRKSINLYGETLIKTLGKEKKG-NSNFKSGVSYLKEFWKSK-GINPNMINFAD 365 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLS N +A +Q L Y + + P+ D + Sbjct: 366 GSGLSPQNYVAAKAEVQALLYARKQSWFEAYYDGFPV-----------------QDNGMK 408 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 K+G+++ + AG+ T G++ F ++ Y Sbjct: 409 MKSGTMRDTKSFAGYHTAKDGKKYVFSIIINNY 441 >UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flavobacteriaceae RepID=C6X4B5_FLAB3 Length = 486 Score = 287 bits (735), Expect = 6e-76, Method: Composition-based stats. Identities = 93/455 (20%), Positives = 179/455 (39%), Gaps = 53/455 (11%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 + AN +V Y+ + AST K++T A+ LG +FR+ T LE Sbjct: 70 VLRNANWGFVVFDPKTKKIVSSYNENTPLIAASTTKLLTTDTAMSLLGSNFRWHTQLEHS 129 Query: 90 GNVE-NGVLKGDLVARFGADPTLKRQD---------IRNMVATLKKSGVNQIDGNVLIDT 139 G V+ +GVL+G+L DP+L + + + L + G+ +++G+++I T Sbjct: 130 GTVDADGVLQGNLYIVGSGDPSLGTNKAGASSYSAVVSDFLYALSEKGIKKVNGDIIIQT 189 Query: 140 SIFAS---HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 IF + W + + + S + Sbjct: 190 GIFKANKMQRLPENIVWLENGSYY-----------------------------LPAGSTF 220 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 ++ ++ + + + + + + E L V D +Y Sbjct: 221 QISPQNEKLIAKSSNPFNENKNFYYISPYIKQMV----YADKFEGAGLTTKVADPPAYLA 276 Query: 257 AILKDELKQAGITWSGTLLRQTQV--NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 ++ + + G+ SG ++ + E T VA S L +++ + ++SDN +A+ Sbjct: 277 NTMRASMIKKGVHVSGKVITKITDVDPEIRTKVAVYASPTLGEIVHYINQRSDNALAEAT 336 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 R +G + T +G V L+ D DGSGLSR N++ P + + L Sbjct: 337 LRTVGFQKEGDQ-TLESGRRVVTDHLKS-INFDTSGLNYMDGSGLSRGNVVTPISQAKFL 394 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 + + LP+AG G+L+ +G++ AKTG+L V LAG++ T Sbjct: 395 TGLMDEKYFKTYFESLPVAGQSGTLKNTFTGEG---NGQIFAKTGTLNKVKTLAGYLKTN 451 Query: 435 SGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +G+ + F ++ Y + R +++ +L Sbjct: 452 TGKTLVFSLLINNYGGSVDQVKVRMEQILKPALQL 486 >UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=2 Tax=Actinobacteria (class) RepID=C8XK26_NAKMY Length = 554 Score = 287 bits (734), Expect = 8e-76, Method: Composition-based stats. Identities = 113/468 (24%), Positives = 186/468 (39%), Gaps = 75/468 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A A+ V+ + + H + PAS K + AA +LGPD TT ++ G Sbjct: 83 ALGQWAISVRDIDTGEQIVSLHPDTLFEPASVTKTYSTGAAWQELGPDSTVTTPVKRTGE 142 Query: 92 VENGVLKGDLVARFGAD----------------------------PTLKRQD----IRNM 119 V G L GDLV D TL +D + + Sbjct: 143 VTGGTLNGDLVLVGKGDITMGGRTKPDGTVDFTNLDHNDANGIPGATLTTEDPLTGLNEL 202 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 A +K SG+N++ G+V++D ++ HD P I+++N + Sbjct: 203 AAQVKASGINEVSGDVIVDDRLWQPHDL------------VGNPVTPIIINQNVIDFT-T 249 Query: 180 SAPKPGDMAFIRVAS-YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 +A PG A I ++ P + +QV+T+ G ++ D TLTG + Sbjct: 250 TATTPGQPASIVMSPVVAPWQIDNQVQTVEAGGK----TQIKPTSTDEKTVTLTGTIAAD 305 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--------PGTVVASK 290 S P+ + +D A+YA + L +AG+T + + + T VA Sbjct: 306 SAPVVNVYLFKDPATYARTAFIEALGRAGVTVTADPVATNPDSALPPKADVDGLTSVAEL 365 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 S PL + + + K S N + +F + A + G ++I Q AG+D Sbjct: 366 TSLPLKEEITYINKISYNNGGEAMFCRLAVAAGS--DDCEQGLRKGQEIW-QAAGLDTNA 422 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 ++ DGSGL N + P + +Q+ +A+ + ++ LP+ G DGSL + Sbjct: 423 VVLVDGSGL-EGNYVTPNSQVQLQTIMAKRPDSQEWLDTLPILGVDGSLATVQSTSPSA- 480 Query: 411 DGKVSAKTGSLQG-----------VYNLAGFITTASGQRMAFVQYLSG 447 GKV KTG+L V L G + T G+ AF + + Sbjct: 481 -GKVFGKTGTLAAGDAFNDRYRLPVKALGGQMDTEGGRHFAFAVFSTN 527 >UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G425_9DELT Length = 548 Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats. Identities = 106/451 (23%), Positives = 187/451 (41%), Gaps = 34/451 (7%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 + ++ L A +A+ ++ + + A +++ PASTQK+ITA+AA+ LGPD++F T Sbjct: 109 DAVSGLGPKARVAVELRDLDSGARLASIGAERGLHPASTQKLITAIAAVELLGPDYQFET 168 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK-----SGVNQIDGNVLIDT 139 +L +G+ LV R DP L D+ + + +GV ++ ++D Sbjct: 169 SLSREGDA--------LVLRGQGDPDLHLADLHALASAAMDDPESLAGVTRV----VVDD 216 Query: 140 SIFASHDKAPGWP---WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 S F+ H PG+ D + AP A +D V++ G Sbjct: 217 SAFSHHRLGPGFGSARPGDFGHSYMAPSGALAMDYATVEVTVRPGRFNGPARVALSLPDA 276 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 V + + RT G + R + G +P P + V D AG Sbjct: 277 AVELVNHART---GFGGELEVRTEPGSQGRTRVIVEGWIPAGHAPASVRRRVSDPGLAAG 333 Query: 257 AILKDELKQAGITWSGTLL----RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 A D L + + L R +A +SAPL ++L L+ S+N A+ Sbjct: 334 AAFADVLARVAGEGAEPLPVVRGRLGATAARSKELAVHRSAPLTEVLSSALRFSNNFTAE 393 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD-IGNTIIADGSGLSRHNLIAPATMM 371 V R + + PG+W G + + + + + +GSGL+R ++PA ++ Sbjct: 394 QVLRTLAWRATDTPGSWDDGVAVLERFAAALTDDERLADQHFVNGSGLNRDGRLSPAFLV 453 Query: 372 QVLQYIAQ-HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 L + ++ AG +G+L+ R G G++ AKTG+ +LAG Sbjct: 454 DALALTQRPGSPAQALLASFAEAGSEGTLRGRL----PGAGGRLIAKTGTYGSTSSLAGI 509 Query: 431 ITTASG-QRMAFVQYLSGYAVEPADQRNRRI 460 + G + +AF ++G +VE + + Sbjct: 510 VYDEPGQRPVAFAILVNGESVERSRAAQDAV 540 >UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Pedobacter RepID=C6XU53_PEDHD Length = 468 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 170/441 (38%), Gaps = 41/441 (9%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 A+ +L+V + AST K ITA A LG DF+F TTL G + Sbjct: 42 ASTSLLVLDANTGKTLFGRNENIGLATASTLKTITAATAFNILGKDFQFQTTLGYTGQLT 101 Query: 94 -NGVLKGDLVARFGADPTLKRQD--------IRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 +G LKG+LV DPTL + V + +G+ +I+G V+ D IF + Sbjct: 102 PDGTLKGNLVITGSGDPTLGSARYQNKEKAVLDQWVNAISAAGIKRIEGMVIGDDRIFGT 161 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA-FIRVASYYP-VTMFS 202 GW W D+ + A + N F + L +R P + + + Sbjct: 162 QTTPEGWTWQDIGNYYGAGTSGLAWRENQFDIHLQPGQGINTAVKLLRTVPEMPYLKLVN 221 Query: 203 QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 +++T G+ + Y L P N L G ++ A+ D A L+D Sbjct: 222 ELKTGASGTGDNAYAFL---PPYSNIGYLRGSWGMGIGKNGISAALPDPAFDCAYRLQDT 278 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVV-------ASKQSAPLHDLLKIMLKKSDNMIADTVF 315 LK+ GI+ + + G + +S S PL +++ LKKS N+ +T+ Sbjct: 279 LKRLGISTAKPATSTRMMALNGEELPGITKNLSSISSPPLSEIVFWFLKKSINLYGETLL 338 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 + + + T G+ A + G+D I DGSGLS N + A M +L Sbjct: 339 KTLALKSGKMAKTTE-GAKAEINFWADK-GIDRNALNIIDGSGLSPANRVTAAAMGSILF 396 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 ++ P + K+G++ V AG+ T + Sbjct: 397 MAQTASWFSDYYKAFP------------------EYNGMKIKSGTINDVSAFAGYYTNGA 438 Query: 436 GQRMAFVQYLSGYAVEPADQR 456 G + V ++ Y+ +++ Sbjct: 439 GNKYIIVININNYSGSGINRK 459 >UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCW6_PSYWF Length = 682 Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats. Identities = 95/494 (19%), Positives = 182/494 (36%), Gaps = 75/494 (15%) Query: 43 VGASAPA---IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 V + P + + S+ PAST K+I AL LGP+F + T G + L G Sbjct: 191 VDDNQPLAYPLRHLSELPRTPASTMKLIPTFIALDLLGPNFVWVTQAYHTGFISANTLYG 250 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC 159 DL+ + DP L Q + ++ +K++G+ I G++++D+S+F K P ND + Sbjct: 251 DLIIKGSGDPKLTLQRLNKLLEQVKQAGIQHIKGDIVLDSSVFQGVTKDPAAFDNDPLRP 310 Query: 160 FSAPPAAAIVDRNCFSVSLYS---APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 ++A P +V+ + ++ + G + + + T G+ + Sbjct: 311 YNASPDGLLVNFSTLELTAVPLLNDAQRGTAKLYYKPLMADYDLPTTLPTASLGNCSSAR 370 Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL- 275 L + LP A D +A ++K + G T SG++ Sbjct: 371 SSLAPI-WQAQGLKFNKSLPTSCGARTFYIAYPDAKDFAKRVVKGQWLSLGNTLSGSIKF 429 Query: 276 ----------------------------------------RQTQVNEPGTVVASKQSAPL 295 + + S PL Sbjct: 430 LGLGNTVAGDMINTETPLKTSAGTYLDMSSSTDKNAVLAQSVSVLPASPLPFVRYPSLPL 489 Query: 296 HDLLKIMLKKSDNMIADTVFRMI-------------GHARFNVPGTWRAGSDA---VRQI 339 + + S+N++ + + + GHA ++ + A + Q Sbjct: 490 SQQIFDINHYSNNVMTEQLTLTLPLFSDPSAAPDTTGHAIKPQKDSYSNYTKALGTINQW 549 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL 399 Q + ++++GSGL R + + +LQ+ H +++ L +AG G++ Sbjct: 550 W--QKNLSTPAPVMSNGSGLCRDCSVTAENLADLLQFAYNHRYFDTYVNSLGVAGISGTI 607 Query: 400 -QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 ++ L + G+ KTG+L V ++AG++ SGQ V ++G + Sbjct: 608 TEHAERLPSSAAIGRAWIKTGTLNNVTSMAGYVHGKSGQDYIVVGIINGSTNQ------- 660 Query: 459 RIPLVRFESRLYKD 472 PL +E+R D Sbjct: 661 -APLNTYEARYVLD 673 >UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZBZ1_NATMA Length = 508 Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats. Identities = 101/453 (22%), Positives = 187/453 (41%), Gaps = 24/453 (5%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 V A +V +++ Q A +++ + + D S++ PAST K++T AA + Sbjct: 60 PPVDAGDVFDHLDQ----AAISVFARDIETGDVIADSGSERPVQPASTAKLLTTAAAFDE 115 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 LGPD+R+ TT+ G+ N + L DP L D+ + A + +G+ ++ + Sbjct: 116 LGPDYRYETTVGVVGDRRNQRVVESLGVVASGDPDLTASDLEALAAAVADAGIERVTDRL 175 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 ++D S F + P W D + + +A +V+ N +++ + Sbjct: 176 VVDVSAFDDGEYPPAWTLGDAVNTYGSKSSAFVVNHNEAEITVSRQGDTCEFEHTVEPDS 235 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 V + ++ + ++ + N + G + E + V +A Sbjct: 236 GLVDVEIELECV----DSDRFVTITTPNHWTNTAEVNGRMVPDDEA-TASVPVATPNEHA 290 Query: 256 GAILKDELKQAGITWS----GTLLRQTQVNEP---GTVVASKQSAPLHDLLKIMLKKSDN 308 + L G+ + G + P VA+ +SAPL D+ + + S N Sbjct: 291 ARVFARALADEGVEITPGGGGPEPEIEITDVPIELTEEVATHESAPLSDIAEGVNHWSYN 350 Query: 309 MIADTVFRMIGHARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 M+A+ + R + + R G+W + + L I DGSGLSRH+L + Sbjct: 351 MVAENIARTVAYEREGTGNGSWSVWEAYLDETLAAAG---AETPQIRDGSGLSRHDLASA 407 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ ++++ D F + +AG DG+L+ R G A + KTGSL+GV L Sbjct: 408 RDVVSMIEWGLDADWGEEFYGTMAVAGEDGTLRNRLGDVDAT----IRGKTGSLRGVTCL 463 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 AG I +F + E A+ + R+ Sbjct: 464 AGVIEDDGEPATSFAVLAANLTGERANGASPRV 496 >UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXB7_CHLT3 Length = 455 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 99/430 (23%), Positives = 167/430 (38%), Gaps = 58/430 (13%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 + +++Q + + + PAS K++T AAL +LGPDF+F T + G Sbjct: 53 LSATRFGILIQTAD-GETIYEQNPNGLIKPASNLKLVTTAAALEKLGPDFKFRTDIFIDG 111 Query: 91 NVENGVLKGDLVARFGADPTLKR-------QDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 + GVL G+L+ DP L + ++ V TL GV Q+ G V++D S + Sbjct: 112 YLSYGVLHGNLIISGSTDPLLSGFFDGQINEIVKQWVDTLYTLGVQQVRGEVILDNSYYV 171 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ 203 +D +D + AP + +A A+ + S+ Sbjct: 172 GNDV----EIDDGEEY--APV------------------QFSTVASFTRANTSQLNRVSR 207 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 VR + S + G L + Y L E+ Sbjct: 208 VRVINTRSGTKKVVRRGFSRGSR-----------------LKRVRIEPNIYLTDALVGEM 250 Query: 264 KQAGITWSGTLLRQTQVNE----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 K I +S + + + + S SAPL ++L K SDN AD + R +G Sbjct: 251 KARNIIFSEGIEKINYSQKIDRTQWKHIYSHYSAPLSEILSRTNKTSDNFYADQLLRTLG 310 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-A 378 + G + V L G I DGSGLS N + P +++V++Y+ Sbjct: 311 GEYRG-EASIEKGIEVVNDFLLYNVGASRDEFHIVDGSGLSHDNQVTPNLLVEVMKYMKR 369 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + ++ L + DG+L R + + AKTGS+ G+ +L+G++ + SG Sbjct: 370 RSKYFSDYYESLSIPTVDGTLVSRIHHE---LATNIRAKTGSISGITSLSGYLKSRSGMD 426 Query: 439 MAFVQYLSGY 448 + F + Y Sbjct: 427 IYFSIIGNSY 436 >UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7A5_9PLAN Length = 524 Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats. Identities = 116/492 (23%), Positives = 199/492 (40%), Gaps = 77/492 (15%) Query: 13 CIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 +A +VQA + P A A+ ++ + + ++ S ++ PAS K+ + Sbjct: 32 SLAMAVQA------LADQPLYAQAHWGILAVDLESGEVVLERDSGKLFAPASVTKLFSCA 85 Query: 71 AALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGAD--------------------- 108 +AL LG +R T L +G + +G L GDL+ R D Sbjct: 86 SALDYLGASYRSRTPLLMRGTLASDGTLTGDLILRASGDFHLGNRLREDGTIDFTSSDHT 145 Query: 109 -------PTLKRQD----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT 157 L QD I + + G+ ++ G VL+D ++F + P Sbjct: 146 YSNWASDSRLTPQDPLTGIIQLAKAARAFGIRKVTGEVLVDDTLFDHTTSSGSGP----- 200 Query: 158 QCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYC 217 A V+ N +++ A G+MA I P T ++ + A Sbjct: 201 ----AQVTPIFVNDNVLDLTITPAAA-GEMATIEA---RPATALFKITSEVTTGASDSKA 252 Query: 218 ELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL--- 274 + V + G +P PL V A YA A+L + L + GI + Sbjct: 253 SVQVSCDPRGNVVVKGTIPAGRAPLLRHVEVPSPAGYARALLIEALAREGIELVAKISLD 312 Query: 275 -----LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 L + V S PL + +K++LK S N+ A ++ ++ ++ T Sbjct: 313 HPQAKLPTADDYQKLAAVGEVVSPPLSESVKLILKVSHNLHASSLPLVVAASQGKR--TA 370 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G + L+ +AGVD+G G+G S + + P +Q+LQY+ + D+ +I+ Sbjct: 371 AEGMKLEGEFLK-RAGVDVGTISFGGGAGGSSADFVTPRATVQLLQYMVKRDDAKEYIAG 429 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ-----------GVYNLAGFITTASGQR 438 LP+ G DG+L A ++ GKV KTG+L LAG++TT G+R Sbjct: 430 LPILGVDGTLAT-AIDPESPARGKVQGKTGTLVWDNLLNGDSLLTSKGLAGYMTTTKGRR 488 Query: 439 MAFVQYLSGYAV 450 +AF +++G + Sbjct: 489 LAFALFVNGVHL 500 >UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTD2_CHRSD Length = 492 Score = 280 bits (716), Expect = 8e-74, Method: Composition-based stats. Identities = 109/467 (23%), Positives = 185/467 (39%), Gaps = 20/467 (4%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + + + S A T G + Q +G+ + PAS K+ Sbjct: 24 MLVLLGLPLSAVADGFSNLATLADKGFVIGAQAQLLGSGENLGSIQPTRRLSPASVTKLY 83 Query: 68 TALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 TA A+L + GP RFTT L G V+ GVL+GDLV G DP L +++ +V L++ Sbjct: 84 TAAASLDRWGPQHRFTTQLMATGEVDAQGVLQGDLVFDGGGDPALTSENLWRLVQRLRER 143 Query: 127 GVNQIDGNVLIDTSIFASH-----DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 GV +++G +++ F D+ +D +SA ++A V+ + + Sbjct: 144 GVRKVNGELVVSQWRFGPVTCVTTDRCEARTRSD--NAYSALLSSAAVNYGSWCNLIKPG 201 Query: 182 PKPGDMAFI-RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 GD A I + P+T T + + + + ++G + Sbjct: 202 AAVGDAATISDCTTVAPLTRIDNRVTTVAPGGDTRLSAERLSDAQGDTLRISGQIAHGGF 261 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + A D A L L QAGI G T +A+ PL ++L Sbjct: 262 SREIYRASSDPAEQTAKTLVALLGQAGIEVDGHATSTTPPPTTAKRLAAVDGKPLQEVLL 321 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 ML S+N +ADT+ + + R DA+ + R G G + GSGL+ Sbjct: 322 RMLNYSNNFMADTLALDLVAKPG---ASLRDAGDALMRFARDLPG--HGVPTLVSGSGLT 376 Query: 361 RHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 N ++ + +L + + F++ L L +G + + + V KTG Sbjct: 377 PENRVSAQDINALLSAMYRRSALFPTFVAGLQLP-TNGPMHFIRRGSET-FQQNVMLKTG 434 Query: 420 SLQ---GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 +L V +AG+ T G+ +F ++G A P + +PLV Sbjct: 435 TLNEPVTVRAVAGYFRTRQGRWGSFAVLVNGTAQTPYLAWRQVLPLV 481 >UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Rhodobacteraceae RepID=Q28L64_JANSC Length = 493 Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats. Identities = 96/450 (21%), Positives = 162/450 (36%), Gaps = 26/450 (5%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 E I G + V V + PAS K ++ L +LGP++RF T Sbjct: 47 EIIRDAGLGGRVGFAVADVATGEILEVVNPLYPLPPASVAKTVSCAYGLDRLGPNYRFRT 106 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 L + G + +G L GDL DP + M L G+ ++ G ++ T Sbjct: 107 RLVSNGVLADGRLDGDLWLVGSGDPLFDTDALAAMADDLVNMGLREVTGRFMVATGALPE 166 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF---IRVASYYPVTMF 201 + P ++ +A ++ N V D R AS P Sbjct: 167 IWQID--PSQLPHVGYNPAISALNLNFN--RVHFEWERVGEDYTISMDARSASLRPAVQV 222 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 +++R R + Y + + + +T+ + V+ A+Y + + Sbjct: 223 ARMRVEERTTPVYTYSDAE----SHDAWTVAR--GALGDAGSRWLPVRRPAAYMAEVFQT 276 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 + + G+ + E V+A S PL ++L+ M++ S N+ A+ V M A Sbjct: 277 LMGRHGVRLPSPTYELS-APETALVLAEHVSDPLDEILRGMMRWSTNLTAEVVGLMATQA 335 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 + A+ +++ G N D SGL + I P M L Sbjct: 336 TGQSASSLPESGAAMTAWMQETLG--ARNATFVDHSGLGVGSRIRPQDMTHALVSAGSDS 393 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 + + +P ++ R G G +V AKTG+L V LAGF SG+ +AF Sbjct: 394 LLRDLMKDIP-------MRDRDGNVIQGHPIEVVAKTGTLDFVSALAGFARMPSGRDLAF 446 Query: 442 VQYLSGY---AVEPADQRNRRIPLVRFESR 468 + + P DQR R + Sbjct: 447 AIFSADLDRREAIPDDQRERPTGTRTYNRA 476 >UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Rhodobacteraceae RepID=Q16AV2_ROSDO Length = 499 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 100/441 (22%), Positives = 166/441 (37%), Gaps = 24/441 (5%) Query: 24 DEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFT 83 + + + ++A V + PAS K ITAL AL LG RF Sbjct: 50 EALVKKARLSGDVAFAVADAKTGEILEARAPELGIAPASVTKAITALYALDTLGAAHRFK 109 Query: 84 TTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 T + G V +GV++GDLV G DPT + + A LK++G+ ++ G+ + A Sbjct: 110 TRVIATGGVTDGVVRGDLVLAGGCDPTTDTRAFAALAAQLKEAGIREVKGDFRVYEGPVA 169 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI---RVASYYPVTM 200 + P +S A ++ N V G R Y P Sbjct: 170 TVRSID--PEQPDHVGYSPAVAGIALNFN--RVHFEWKRAGGKYTVTMDARAGRYRPEVA 225 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 ++++ + R + Y E G N +G L V+ YAG + Sbjct: 226 VARMKVVQRRAPIYTYEE---ANGRDNWTVASGALGSGG---SRWLPVRRPGLYAGEVFA 279 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + GI + + G V+A +SAPL D+L+ MLK S+N+ A+ + Sbjct: 280 TLARSHGIVL--PAAKLQKAAPQGAVLAEIESAPLSDVLRAMLKYSNNLTAEMIGMAATQ 337 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 AR + A + + + + + + D SGL + ++ M++ L I Sbjct: 338 ARTGQVRSLAASAREMNAWAKDV--LKMQSPAFVDHSGLGGDSRVSAQDMVRGLGAIGHA 395 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + + L G L + AKTG+L V L G++TT G+ + Sbjct: 396 ALLRPLLKSVKLLDSQGRLVNEHPVQAD-------AKTGTLNFVSGLGGYVTTPEGRELV 448 Query: 441 FVQYLSGYAVEPADQRNRRIP 461 F + + A R +R Sbjct: 449 FAIFAADEATRAGITRAQRER 469 >UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B3Z9_9RHOB Length = 503 Score = 274 bits (701), Expect = 5e-72, Method: Composition-based stats. Identities = 98/445 (22%), Positives = 174/445 (39%), Gaps = 24/445 (5%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A++ I G + V + + PAST K ITAL AL LGP+ Sbjct: 53 ASSSKALIDAAQLGGAVGFAVADLSTGKLLETKNKAIGLPPASTAKAITALYALDALGPN 112 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL-ID 138 RF T + T G++ GV+ DL G DPTL + +M A LK G+ ++ G +D Sbjct: 113 HRFATRISTNGSIAGGVISEDLFLIGGGDPTLDTNALASMAAQLKSLGIREVRGQFFYVD 172 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF-IRVASYYP 197 ++ D P P ++ + ++ N + R + P Sbjct: 173 NTLPNLRDIDPSQPD---HVSYNPAISGLNLNFNRVCFEWRRGSNGYAITMDARSTKHRP 229 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL-TGCLPQRSEPLPLAFAVQDGASYAG 256 S+++ R Y + G +++T+ G L + V+ YA Sbjct: 230 NVYISKMQIAARDLPVYTYKD----GGKFDQWTVARGALGKGG---SRWLPVRKPGLYAA 282 Query: 257 AILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 + + + GI +++ + + + SAPL +L+ MLK S N+ A+ V Sbjct: 283 DVFQTFARSQGIILKNP--KRSTKSPKTRALVTHTSAPLTTILRDMLKFSTNLTAEVVGL 340 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 R + +A + + + + +GN D SGLS + ++ M+ + Sbjct: 341 TATRKRGGRATSLKASAKDMSRW--ANTALSMGNASFTDHSGLSDASKVSAQGMLNAMIV 398 Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 + + P A D R + + KV+AKTG+L V L+G+IT G Sbjct: 399 ARRRAGFAQLLK--PFAMRD---AKRKLIKNHPI--KVNAKTGTLNFVSALSGYITAPDG 451 Query: 437 QRMAFVQYLSGYAVEPADQRNRRIP 461 +++AF + +++ + Sbjct: 452 KQLAFAMICADTNRRRGIKKSNKEA 476 >UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EI99_9RHOB Length = 490 Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats. Identities = 104/435 (23%), Positives = 176/435 (40%), Gaps = 24/435 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 VD + + ++V + D S + PAS K TAL A+ LG Sbjct: 42 AVDSMVAGRGFSGDFGVLVADLQTGEVLEDIQSAKAQPPASVTKAFTALYAIEALGAGHT 101 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T + G +ENG+L G+L+ G DP L I ++ LK +G+ ++ G+ L+ + Sbjct: 102 FATRIFADGIIENGILSGNLILAGGGDPNLVTDQIADLAQRLKDTGLREVKGDFLVWDNA 161 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI---RVASYYPV 198 + ++ P ++ N V D R +Y P Sbjct: 162 LINQEEI----DESQFDYLGYNPTITGLNLNYNRVHFEWKLDGEDYVTTLDARSENYRPA 217 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 +++ + R S Y ++ GD++++T+ G ++ V+ A YAG + Sbjct: 218 VTTARISVVDRSSPVFTYSDI----GDVDQWTVAGS--ALNKEGSRWLPVRHPALYAGEV 271 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 + GI ++T V G +AS +SAPL +++ ML+ S N+ A+ Sbjct: 272 FATFARSHGILLKAP--KETAVAPTGMTLASLESAPLRQMMRGMLRFSTNLTAEAAGMAA 329 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 AR P R + + + +AG D SGL + ++PA M+++L Sbjct: 330 TAARAGTPRGLRTSALGMARWANARAG--SITPSFVDHSGLGDQSRVSPADMVRLLGAPD 387 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + + L G D + V AKTG+L V +LAG+I T SG+ Sbjct: 388 VIQTLRPIMRDIRLVGDD-------QQVISDPAVSVKAKTGTLNFVSSLAGYIRTKSGRD 440 Query: 439 MAFVQYLSGYAVEPA 453 +AF + S A Sbjct: 441 LAFAFFASDLEAREA 455 >UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Rhodobacterales RepID=A9DV35_9RHOB Length = 510 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 106/442 (23%), Positives = 167/442 (37%), Gaps = 23/442 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 NV E I +A V V + ++ PAS+ K ITAL AL QLGPD Sbjct: 31 NVSEIIADSGITGTVAFAVIDVESGIWLEASNATDGIPPASSIKAITALYALDQLGPDHV 90 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV-LIDTS 140 F T L G V NG ++GDL+ G DPTL ++ M LK++G+ + G + + S Sbjct: 91 FETRLLATGGVVNGEVQGDLILVGGGDPTLDSDNLGKMAEELKEAGIIGVKGKFKVYEGS 150 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA-FIRVASYYPVT 199 + ++ P P ++ + ++ N D+ R A Y P Sbjct: 151 LPSTFAIDPEQPD---HVGYNPGVSGIALNYNRVHFEWKRDGNGYDVTMEGRAARYAPAV 207 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + + + R Y D + +T+ ++ YAG + Sbjct: 208 RAASMEVVDRSGPVYTYEN----RPDRDVWTV--AKSALGSGGARWLPIRRPGVYAGDLF 261 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 + GI L + G + + +SA L +LK ML+ S N+ A+ V Sbjct: 262 ATIARSHGIKLGDAELAEALP--EGETLVTHRSAKLQPILKDMLEYSTNLTAEMVGMAAS 319 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 R + RA + + + ++ G+ N + D SGL + + M L I Sbjct: 320 SKRLGTVASLRASAAEMNKWAVEELGM--ENPAMVDHSGLGDDSKMTVHDMAGGLARIHG 377 Query: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 P+ L+ G Q K+ AKTG+L V LAGF+TT + + Sbjct: 378 TGLRPILK---PV-----YLRDDRGRPQTNGPIKIDAKTGTLNFVSALAGFLTTPEDRVL 429 Query: 440 AFVQYLSGYAVEPADQRNRRIP 461 AF + R R Sbjct: 430 AFAILTANMDQRAKIPRAERER 451 >UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MCM7_9PORP Length = 500 Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats. Identities = 95/453 (20%), Positives = 170/453 (37%), Gaps = 30/453 (6%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + A + V ++ + PA+ YH+ + PAS K+ ++ ALI LG D++F T + Sbjct: 39 AEQRGEARYGVSVWRIDQTKPALSYHASERFTPASVTKIFSSATALIVLGADYQFPTEIG 98 Query: 88 TKGNV-ENGVLKGDLVARFGADPTLKRQD--------IRNMVATLKKSGVNQIDGNVLID 138 +G + GVL GDL+ DP+L+ + + L+K+G+ QI G +++D Sbjct: 99 YRGTITSEGVLDGDLIIVGHGDPSLESKHYPRRKGIFYDQVYLALQKAGIRQIRGRIVVD 158 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY-- 196 S + W D + ++ + N V + + D+A Y Sbjct: 159 ASAYCDEGYLEAWSRGDWGKRYAPALYGVNLCDNIMQVGISAQ----DVARGASEPSYLH 214 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF-AVQDGASYA 255 P T + + + L+G L + S + + + A Sbjct: 215 PATPGHAWQIDIQLVKRGNLLAISADRESRTTRRLSGRLARGSSKRQVIACDLSNPAMAL 274 Query: 256 GAILKDELKQAGITWS---GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 L + L+Q GI S T++ S L +L++ S N+ A+ Sbjct: 275 ALQLAEHLQQRGIELSECRSVAYYDRSAPVLTTLLDIYLSPHLSELIRTCNFHSVNLYAE 334 Query: 313 TVFRMIGHARFNVPG----TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 + R IG+ +V + R+ + + DGSGLS + ++P Sbjct: 335 ALLRSIGNHFGSVQQGECFSTHQALKREMNYWRETCALPADQLELYDGSGLSPRSKLSPY 394 Query: 369 TMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 + L+ + Q FI LP G G+++ K+GS+QGV N Sbjct: 395 ALTAALRQVYQLPLPTSDPFILSLPQVGRQGTVRS----LMPASRITAYFKSGSIQGVQN 450 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 AG+++ G + P + R Sbjct: 451 YAGYVSYK-GHTYCVSLLANNMRHRPTTRSTMR 482 >UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312D4 Length = 535 Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats. Identities = 99/494 (20%), Positives = 174/494 (35%), Gaps = 79/494 (15%) Query: 17 SVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + + A + I P A+ + ++Q+M P ST K+ + AL Sbjct: 43 ADKVAKIIARIEAKPRYRHADWGFQILDQRTGDVLGAQNAQKMFDPGSTMKLYSVSTALS 102 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------------------- 115 + G ++RF T + +G V G L G LV D TL + Sbjct: 103 RYGTNYRFRTPVYRQGTVSGGTLGGSLVLVGSGDLTLGLRAEPGGRLAYANLPAVDHSYA 162 Query: 116 ----------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQC 159 + + ++ SG+ ++ G+V++D +FA +D P Sbjct: 163 DQLPGAVLPKGDPMAGLDELARDVRASGITRVSGDVVVDDRLFAPYDGFP---------- 212 Query: 160 FSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCEL 219 + V+ N + + + + T+ ++V T+ G L Sbjct: 213 -DGLISPIWVNENLVDLLVKPGAVGQPASIDQRPLTASYTVDNRVVTVRAGKPTT----L 267 Query: 220 DVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ 279 +V +TG + S P + V D A++A L++AG+T + T Sbjct: 268 NVSEPTPGTIEVTGQIAAGSGPTLKVWEVDDPAAFARTAFIAALQRAGVTVTATATGPNP 327 Query: 280 V--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 + V S+ L K++LK S N AD + + R + Sbjct: 328 ATLLPPKGSYQAADRVGEHVSSTLSQYAKLILKVSHNRGADLMTCLAAVRRGST--DCED 385 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 G + Q GV I DG+G PA + +L+++ + F+ LP Sbjct: 386 GLTSEVQT-ASGLGVPYAGVIPMDGAGSDDQGRTTPAALATLLRHVVRAPYGRAFVDALP 444 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV------------YNLAGFITTASGQRM 439 + G DG+L ++ G+ KTG V +LAG+ T SG+R+ Sbjct: 445 ILGRDGTLANVE--SRSPAAGRSQMKTG--NRVVSNAAGQIIVLGNSLAGYAETKSGRRV 500 Query: 440 AFVQYLSGYAVEPA 453 F+ + A Sbjct: 501 VFMIAVGNVPTRTA 514 >UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Rhodobacteraceae RepID=B9KKY6_RHOSK Length = 507 Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats. Identities = 101/427 (23%), Positives = 163/427 (38%), Gaps = 25/427 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 + + + G +A +V + ++ PAST K +TAL L LGPDFR Sbjct: 64 EAGDLVARAALGGAVAYVVADARSGTVLEAANAALRLPPASTAKTVTALYGLETLGPDFR 123 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 FTT L G V NG+L+GDL+ DPTL + M A L+ GV I G L D S Sbjct: 124 FTTRLLATGPVTNGILQGDLILSGSGDPTLSTDALGEMAARLRARGVTGITGRYLADASA 183 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF-IRVASYYPVTM 200 + P ++ + ++ N A K + R + P Sbjct: 184 LPAVPLID--PEQPDHVGYNPALSGLNLNFNRVHFEWKQAAKGWSVTMDARAERFVPPVS 241 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 ++++ + R Y G + +G L V+ +Y + + Sbjct: 242 MARMKVVTRDLPIYTYA---GDQGSDSWTVASGALGAAG---SRWLPVRHPEAYTAEVFQ 295 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + GI + + + G + QS PL ++L+ MLK S N+ A+ +G Sbjct: 296 TLARAQGIELPAAQVVRVRP--EGAALVEWQSDPLREILRDMLKFSTNITAEA----VGL 349 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 A P + + A+ ++ G+ D SGL +L++ A M+ L + Sbjct: 350 AASGAP-SLAQSAAAMSAWANRRFGISTA---FHDHSGLGGGSLVSAADMVTALLAAERE 405 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 L PL + G + V+AKTG+L V L G T G+ + Sbjct: 406 GLGLR-----PLMKRTE-IGGGKGTKKGARRIAVAAKTGTLNFVSGLVGIATAEDGRDLV 459 Query: 441 FVQYLSG 447 F Y + Sbjct: 460 FAIYCAD 466 >UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RY58_RHORT Length = 528 Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats. Identities = 98/433 (22%), Positives = 172/433 (39%), Gaps = 30/433 (6%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 + V+ + +++Q+ LPAS KV T +AAL LGP +R+ T L + G+V + Sbjct: 62 QIGFAVRDLQTGRWLSAHNAQEPFLPASVSKVPTTVAALELLGPSYRWETRLVSTGSVVD 121 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 GVLKGDL G DP L + + +V +L +G+ +DG L D ++ AS + Sbjct: 122 GVLKGDLYLVGGGDPVLDGRRLSALVDSLGTAGIRAVDGRFLYDDTLIASAPEIEPSQPA 181 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D+ ++ A +D N ++ P V V P S +A Sbjct: 182 DL--AYNPGFGALALDFNRVMLTWDPKGGPRMGEVFDVPPVDSVRFRVSGPQDPPWSTKA 239 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLP----------------LAFAVQDGASYAGAI 258 + P G P P V+ ++ + Sbjct: 240 GALRYEDTPPP---VVTAGLAPMAHPPQTPGESWVLAPTWKGSGSTWLPVKHPGAHVAQV 296 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 + ++ G+T + V+ +S PL ++ LK S+N++A+ + Sbjct: 297 ARALAQRDGVTL--PPPQPGAAPPRARVIGLSESPPLFEVATAALKHSNNLVAEMIGMTA 354 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQA-GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 ++ + + R G+D +A+ SGL+ + + P M +L Y Sbjct: 355 TRRITGRALAPTESAETLAALFRATLPGLDWSTFRLANHSGLTMDSRMTPEQMTAILDYA 414 Query: 378 AQHD-NELNFISMLPLAGYDGSLQYRAGLHQAGVDGK--VSAKTGSLQGVYNLAGFITTA 434 H + L++ +LP L+ + L + DG+ V AKTG++ LAG+I Sbjct: 415 QLHAFSGLDYAGLLPT--RRWGLEDDSDLPETR-DGRLPVWAKTGTVYYGRGLAGYIVPR 471 Query: 435 SGQRMAFVQYLSG 447 SG +AF + + Sbjct: 472 SGHLLAFSFFAND 484 >UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKK1_9CAUL Length = 506 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 111/453 (24%), Positives = 175/453 (38%), Gaps = 39/453 (8%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL--- 76 AA +DE AG +M + +D + PAS K+ T AA L Sbjct: 45 AAILDEP---GLAGTRWGMMAMTLD-GQVLVDIRADDRFSPASNTKIFTTAAAFALLQDP 100 Query: 77 -GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ----DIRNMVATLKKSGVNQI 131 PD T++ + E D V DP L + Sbjct: 101 GDPDPMDGTSVRLEARGEGRAP--DAVLMGAGDPALGDGPDCVADCLAALADATAARTTR 158 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 G+V+ D ++ + PGW W DM + F +A V+ N + + G A ++ Sbjct: 159 VGDVVGDDRLYPDERRGPGWAWEDMQEGFGTAVSALTVNDNIVVLQVSPVQTAG--APVQ 216 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 A + V T + ++ PG+ + L G +P S+ + L + D Sbjct: 217 AAWRAGDDLLPLVNTAVTVAVGETDLRVERRPGE-DVVRLYGQMPTGSDAVALRVGLDDP 275 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQV-----------------NEPGTVVASKQSAP 294 A A + L+ G+T GT+ + + G VA P Sbjct: 276 ALTAALRFRRLLEARGVTVEGTVRARHRPLELSDDPTRGDSLPPVDQPDGVEVARLARPP 335 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L L + S N+ A+ + R + G G V ++ AG++ + Sbjct: 336 LLASLNRTARFSQNLHAE--LLLRRLGRLDGTGARAEGLAQVEAVMAT-AGLERAAFDLY 392 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLS +N I+P L + ++ + + LP+AG G+L R ++G+V Sbjct: 393 DGSGLSAYNRISPRATTTFLVWTSRQPWGEAWRATLPVAGQAGTLLRR--FAGTPLEGRV 450 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 AKTGSL GV LAGF+T ASG+ +AF Y + Sbjct: 451 FAKTGSLNGVNALAGFLTAASGRTVAFSIYAND 483 >UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWB7_9GAMM Length = 604 Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats. Identities = 99/513 (19%), Positives = 177/513 (34%), Gaps = 90/513 (17%) Query: 23 VDEYITQLPAGAN-----LALMVQKVGAS----------APAIDYHSQQMALPASTQKVI 67 + E I A AN L+++VQ + + P Y++ PASTQK+I Sbjct: 69 LPETIQAKLAQANIPTDSLSMVVQPLTDNAQNVASTAPQKPLFSYNADVPRTPASTQKLI 128 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 +L LG DF + T L G V G L GD++ + DP L+ + + ++A +K G Sbjct: 129 PTYVSLDSLGKDFVWQTKLYQHGFVWKGTLYGDVIVQGSGDPKLENERLYQLLAMIKAQG 188 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG-- 185 + Q+ GN++ID F D + ++A P A + + V L KP Sbjct: 189 IKQVQGNLIIDNQQFQGVDFDVNAFDGKGLRPYNAQPNALLTNFGTVEVDLVPIAKPNAI 248 Query: 186 ------------------------------------------DMAFIRVASYYPVTMFSQ 203 D+A +V + F+ Sbjct: 249 AAIKPAKASASGSSATTSNTSDLYNEAANLEQIQSKPSINPKDVAAYQVILKPALANFTM 308 Query: 204 VRTLPRGSAEAQYCELD-VVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 TL A + D + + DG + + Sbjct: 309 PTTLKASQAPCNSSQDDWIGTLTSTGLSFHQTASAFCGEQKRYLTFPDGDVLVKQQIIAD 368 Query: 263 LKQA------GITWSGTLLRQTQ---------------------VNEPGTVVASKQSAPL 295 ++ I ++ + Q +V S PL Sbjct: 369 WQKILPNFTGNIEFANPAVPYMQQAKAIPQALPWYIRLYLKYFGKPLTPKLVGYVASNPL 428 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGH-ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 H+ +K + + S+N++ + + + A T+ + Q +Q+ ++ Sbjct: 429 HEQIKDINQHSNNVMTEQIALSLPLYADKQRISTYPKTFAYIHQWWQQKLP-QAQPPVMT 487 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQY-RAGLHQAGVDGK 413 SGL R +AP +M+ +L N + L +AG G+++ + G Sbjct: 488 RASGLCRDCRVAPNSMLALLTLAYHSPNFTVYRDSLGVAGESGTIKALKLRQPNNPAIGH 547 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 KTG+L V ++AG++ SG+ A V ++ Sbjct: 548 AWIKTGTLDNVTSMAGYVQGKSGKWYAVVGMIN 580 >UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Rhodobacteraceae RepID=C7DAS9_9RHOB Length = 504 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 93/429 (21%), Positives = 162/429 (37%), Gaps = 26/429 (6%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 +A M+ Q PAS K +TAL AL QLG + RF T + G Sbjct: 67 GTVAFMLADAETGEVLEANAEQIAQPPASVAKAVTALYALDQLGAEHRFETQVIATGGFA 126 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 +GV GDLV DPTL + ++ LK G+ ++ G I Sbjct: 127 DGVCLGDLVLVGSGDPTLDTDAMESVARDLKAVGLREVRGEFQIYEDALPYVATIDAQQP 186 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI---RVASYYPVTMFSQVRTLPRG 210 + + +S + ++ N V D + R + P +++R R Sbjct: 187 DYLG--YSPSVSGLNLNFN--RVHFEWRRAGADYSVTMDARSEKHRPDVAMARMRVERRE 242 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 + Y + G +++++ + V+ YA +L+ + GI Sbjct: 243 TPVYAYSD----GGHFDQWSVARSALGNAGAR--WLPVRKPGLYAADVLRTFARAQGIAL 296 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 + + + G V+A S + + ++ MLK S N+ A+ R Sbjct: 297 GTASVTRARP--EGAVLARFLSGTMTEQMRGMLKFSTNLTAEAAGL-AASQRTGAIDGLS 353 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 A + + + + + G+D D SGL + I+ M+ L + + N + + Sbjct: 354 ASASLMNRWCKAELGID---ATFVDHSGLGDQSRISAEQMVAALVRVGPNGNLRPILKDI 410 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 + D + R G H +V+AKTG+L V LAG+I G+ +AF + + Sbjct: 411 DMTDED---RKRIGDHPV----QVAAKTGTLNFVSALAGYIRAVDGRMLAFAFFAADVER 463 Query: 451 EPADQRNRR 459 A R+ R Sbjct: 464 RAAISRSDR 472 >UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFU5_NAEGR Length = 453 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 102/438 (23%), Positives = 168/438 (38%), Gaps = 47/438 (10%) Query: 43 VGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV 102 V + Y+ PAS K++T +AAL LG FRF+T +V Sbjct: 2 VNQTIELFSYNPDPFLQPASNNKLLTTIAALNHLGSKFRFSTDFFYDYKNRR------VV 55 Query: 103 ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF---------ASHDKAPGWPW 153 R DPTL + ++ + + + + +++D S F + W W Sbjct: 56 VRPKGDPTLTFEQLQKSLMNVLEKVTSMNPHEIVVDASFFNPIPFTNGGDDEEFPDSWEW 115 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG-------DMAFIRVASYYPVTMFSQVRT 206 ++ FS+ P+A ++ N + ++ G D F A + S RT Sbjct: 116 GNLQYSFSSVPSALSLEHNTLTFTVKGGEVAGQGLSIVLDEPFQSFAKDFFEFDTSLSRT 175 Query: 207 LPRGSAE--AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 L +A ++ N+ + G L + E + + A+ Sbjct: 176 LDCSNANIISKESVTSYYKPLDNKIIVRGQLCAKKESKQTLTVLDTYGFFLQAVSSASAS 235 Query: 265 QAGITWSGTLLRQTQVNEPGTVVAS-----KQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 G ++ E + + S + ++ L++SDNM A+ R +G Sbjct: 236 SNGPK---SVKIDYLSEEERSSMFEFKEECVYSDNILTVMNTTLQESDNMYAELFLRQLG 292 Query: 320 HARFNV------PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 P G V+ IL Q + DGSGLSRHNLI+P +++ Sbjct: 293 TFIKANSSLDVFPSITTRGIQVVKDILTSQFNLSPFTFFQNDGSGLSRHNLISPRSLVDA 352 Query: 374 LQYIAQHDN----ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 L I F+S+LPL G G+L+ R G VSAKTGSL GV +L+G Sbjct: 353 LSAIYYKGAGGVSGETFVSLLPLGGRSGTLRNRFVD----FPGIVSAKTGSLDGVSSLSG 408 Query: 430 FITTASGQ-RMAFVQYLS 446 +I A+ + + F ++ Sbjct: 409 YIRNANYRDPIVFSIIVN 426 >UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWS1_9RHOB Length = 499 Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats. Identities = 94/441 (21%), Positives = 168/441 (38%), Gaps = 25/441 (5%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 + + + ++ +V + PAS K ITAL A LGP RF+T Sbjct: 53 DIVAKTGLTGKVSCVVADARTGKVLEVLNPVLQLPPASVAKAITALYAWENLGPGHRFST 112 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFAS 144 + ++G NGV++GD++ G DPTL + +M A +KK GV + G + +A Sbjct: 113 RVLSEGQTNNGVVQGDIMLVGGGDPTLDTDGLFDMAAKMKKGGVRGLSGKFKV----YAD 168 Query: 145 HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI---RVASYYPVTMF 201 D + PA A ++ N V + R ++ P F Sbjct: 169 SIPEIFQIDKDQPKHVGYNPAIAALNLNFNRVYFEWKRNGSGHSVTMDARGRNHRPAVSF 228 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTL-TGCLPQRSEPLPLAFAVQDGASYAGAILK 260 +++ R Y + G +++T+ +G L + V+ Y + + Sbjct: 229 AKMTIKNRKLPTYTYKD----QGGRDQWTVASGALGKGGG---RWLPVRRPVVYTAEVFR 281 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + GI G V+ + SA L +++ ML+ S N+ A+ V Sbjct: 282 TFARSHGIDLPKPEYINGPAPIGG-VLVERPSADLRNIMTGMLRYSTNLTAEIVGLAATQ 340 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 A G+ RA ++ + ++++ G + D SGL + I+ M+ VL+ Sbjct: 341 ASGGKAGSLRASANEMSAWMQRRLG--NKRAKLEDHSGLGDGSRISAHDMVNVLRSSGTD 398 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 +N + + ++ G A V AKTG+L V LAG+I G+ + Sbjct: 399 GPLINIMK-------EYGIRDAKGRPLANQPADVVAKTGTLNFVSALAGYIRQKDGRILT 451 Query: 441 FVQYLSGYAVEPADQRNRRIP 461 F + + + Sbjct: 452 FAIFTADMKARDRIAKGDEER 472 >UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=Dictyostelium discoideum RepID=PSCA_DICDI Length = 522 Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats. Identities = 90/452 (19%), Positives = 161/452 (35%), Gaps = 41/452 (9%) Query: 33 GANLALM--VQKVGASA--PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 G ++ + + Q PAS K+ T ++ G DF+ T T Sbjct: 61 GTQWGVVADIYTPSNGEFTNIFSLNELQAFTPASNTKLFTTISIFYTFGEDFKVFTPFFT 120 Query: 89 KGN-----VENGVLKGDLV-ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF 142 + + D + + DP++ ++ + + +L+DTS + Sbjct: 121 DKPFNSVSGGSSNSELDFICVKGMGDPSMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFY 180 Query: 143 A-----SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR-----V 192 + W W D+T + + P I++ N + + + G Sbjct: 181 NIGNGVDGNIPSAWEWEDLTSTYGSIPTPLIINENTMDIYITPSNVIGGKPTASFKYSGE 240 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 Y PV + + T S + +TG + + D Sbjct: 241 DKYLPVIILATTTTTSNSSTSTLNYSFKMSSQS---IYITGNCDINGGIQIITVPILDPE 297 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 Y + L+ G+ S T + S L ++L L S+N+ A+ Sbjct: 298 QYFLTVFSALLEDGGVEISQTAIGSCNYTGMDYKSFEVISPELSEMLNYTLLTSNNLYAE 357 Query: 313 TVFRMIGH---ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 T R +G A T++AG + ++Q L + DGSGLSR+N I P + Sbjct: 358 TFLRQMGTFNSAASESTPTYQAGLEYIQQTLS----IPTSLYTQVDGSGLSRNNFITPKS 413 Query: 370 MMQVLQYIAQH--DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ V++ + + D + ++IS LP+A G+L R G V AKTGS+ GV +L Sbjct: 414 LITVIENVYTNVGDPQHDYISYLPVASLSGTLSKR--FINTPASGIVHAKTGSMTGVNSL 471 Query: 428 AGFITTASG------QRMAFVQYLSGYAVEPA 453 G I +G + F + + Sbjct: 472 TGVIL-PNGLSDDQQNSIFFSIIANNSPAQNT 502 >UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGJ9_KOSOT Length = 380 Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats. Identities = 93/476 (19%), Positives = 190/476 (39%), Gaps = 97/476 (20%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 + I + + S+ V E + + + V+ + Y++ ++ PAS Sbjct: 1 MKKVIFLIFILLTTSIFGDTVRELVDNFD--GFVGIYVEDIETGEIITQYNATKLFTPAS 58 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT 122 K+ T LAAL LG ++ + T G D + DPT+ + +++A Sbjct: 59 VTKLFTLLAALENLGLEYTYKTKFYLIGE--------DFGVKGSGDPTIYVSTLHDIIAK 110 Query: 123 -LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 ++ + +I+ N+++D +F D + + ++ Sbjct: 111 IVEDKKIVEIN-NIILDDRLF------------DRKEIYG-------------RGWMWDD 144 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 P P A YP + ++++TLT Sbjct: 145 PNPMIGALTIKGPSYP-----------------------SISSGIDQYTLT--------- 172 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 LK ++ G++ G ++ + +++ +S PL ++LK Sbjct: 173 -----------RKFFETLKSTFEELGVSVKGEMVVK-YISKKHEPAYIHESKPLREILKS 220 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 M++ SDN +A+ +FR +G A+ GT A+ + ++ + + I DG GLSR Sbjct: 221 MIEVSDNQVAEQIFRTVG-AKVLKKGTINNSIAALIRTVKSVTEYGVNDFTITDGPGLSR 279 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +NL++P ++++L+++ + + +L + DG+++ R V KTG+L Sbjct: 280 YNLVSPKLVVEILKHMYK-KYGDTLLDILSYSKNDGTIKGRFDFE-------VWGKTGTL 331 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 GV LAGF+ T SG+ + F + + ++ D + FE+ + + Y+ N Sbjct: 332 TGVSGLAGFMKTKSGKMVVFSLFENNFSKSKTDAKG-------FENSILEIFYEGN 380 >UniRef50_B2T8J3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=2 Tax=Bacteria RepID=B2T8J3_BURPP Length = 544 Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats. Identities = 109/519 (21%), Positives = 191/519 (36%), Gaps = 91/519 (17%) Query: 8 IGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQQMALPAS 62 + L SC V + I Q+ A ++ V + + D +S L S Sbjct: 19 VLLVSCGDSLSSNPTVPDSIMQVMQKPVYKNATWSMQVVDLDSGHVIYDLNSDAQMLVGS 78 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQD------ 115 +K+ + +AL QLG +F T + +G ++ G L G+L+ D T+ + Sbjct: 79 VRKLFSVGSALNQLGAQHQFVTPVYRQGTLDAGGTLTGNLILLASGDLTMGGRANPDGTI 138 Query: 116 --------------------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 ++ + +G+ +I+G+V+ID +F Sbjct: 139 AITNFDHNEANSLGNAILATPDPLAGFNSLATQVAAAGIKKINGDVVIDDRLFEPF---- 194 Query: 150 GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 D F+ P V+ + VSL + + + F ++ S + T Sbjct: 195 -----DFRGEFNVRP--IFVNDDVVDVSLDQSAEGSAVPFDWRPRTAAFSVQSALATGSA 247 Query: 210 GSAEAQYCELDV-----VPGDLNRFTLTGCLPQR-------SEPLPLAFAVQDGASYAGA 257 S ++ PG + T G +P + PL F V + ++YA Sbjct: 248 ASQLDIELAPELPLCIGSPGCIGNIT--GNVPAGFVPPLTNAYPLIRTFRVTEPSNYART 305 Query: 258 ILKDELKQAGITWSGTLLRQTQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + + L +AG++ + + V T VA S P ++ ++K S N+ Sbjct: 306 VFIEALARAGVSVTAAPVAANPVQLLPAKGSYSSATQVAQLTSQPYEQYVRYVMKVSYNI 365 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 ADT + G AR T A + L + DGSG + + Sbjct: 366 GADTSLMLFGLARDGST-TLSGALAAEQAELSTTFKIASNQYHFIDGSGGG-DSTASGTA 423 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ----AGVDGKVSAKTGS----- 420 ++ +L+ ++ + LP+ G DGSL AG G+V AKTG+ Sbjct: 424 VIAMLRGMSTTQVFSPYFDALPVLGVDGSLATITAFESDATLAGAKGQVHAKTGTYVTEN 483 Query: 421 --------LQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 L+G +LAG+I SG R+AFV ++ + Sbjct: 484 PNTPTLPFLRG-QSLAGYIDAKSGHRIAFVLTVNNVPIS 521 >UniRef50_D1UR62 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UR62_9BURK Length = 550 Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats. Identities = 108/518 (20%), Positives = 176/518 (33%), Gaps = 87/518 (16%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQMALPA 61 + L SC V I Q+ A+ ++ V + + D +S L Sbjct: 24 VCLLASCGGSVNSNTTVPTSIMQIMQKPVYRNASWSMQVVDLDSGGAIYDLNSSTQMLIG 83 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPT---------- 110 S +K+ + A LG D RF T + +G+V NG L G L+ D T Sbjct: 84 SVRKLFSTGNAFNALGADHRFVTPVYRQGSVAPNGTLNGSLILVASGDLTMGGRANPDGT 143 Query: 111 ------------------LKRQD----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 L D ++ A + +G+ I+G+V+ID +F + Sbjct: 144 TAFTAFDHNEANALGNAVLTTPDPLAGYDSLAAQVAAAGITTINGDVVIDDRLFEPFNFR 203 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 + V+ + V+L + + F ++ S + T Sbjct: 204 DQFD-----------VRPIFVNDDVVDVTLAQSAGGAAVPFDWRPKSAAFSVQSTLTTGS 252 Query: 209 RGSAEAQYCELDV---VPGDLNRFTLTGCLPQR-------SEPLPLAFAVQDGASYAGAI 258 S A + + T++G +P + PL F V ++YA + Sbjct: 253 ATSKLAIDLNPESPTCIGAPNCGGTVSGNVPAGLVPPLTNTYPLVRTFRVTQPSNYARTV 312 Query: 259 LKDELKQAGITWSGTLLRQTQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 + L +AG+T + V VA SA L+ + K S N+ Sbjct: 313 FIEALARAGVTVTAAPAEANPVQLLPAKGSYSSSQQVAQLTSATYAQDLRFVNKVSYNIG 372 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 AD G A T A + L + DGSG + Sbjct: 373 ADVTLMQFGLAHNGST-TMANSLAAEQGELSATFNISPDQYHFIDGSGGGDTT-ANARAV 430 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ----AGVDGKVSAKTGS------ 420 + +L+ ++ + LP+ G DGSL AG G+V AKTG+ Sbjct: 431 IAMLRGMSTKPAFAPYFDTLPVLGVDGSLASITDFEADSTLAGAKGQVHAKTGTYVTENP 490 Query: 421 -------LQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 L+G LAGFI SG+R+AF ++ + Sbjct: 491 AAPGTPILKG-QALAGFIDAKSGRRIAFFVTVNNVPIT 527 >UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CXB9_METMJ Length = 531 Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats. Identities = 113/483 (23%), Positives = 183/483 (37%), Gaps = 70/483 (14%) Query: 16 FSVQAANVDEYITQLPAG--------ANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + +AAN E+ ++ A A +M + + + ++ P ST KV Sbjct: 44 IASEAANATEFKERIDAVISQERYDYATWGMMARDTSTGEVLLSMNGDRLFTPGSTTKVF 103 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG--------------------A 107 T AL LGPD+RF T + G+ V GDL Sbjct: 104 TVSTALDVLGPDYRFRTPVYRVGDDLVLVASGDLAMGGRAGPNGTLAFTNEDHGDARAFG 163 Query: 108 DPTLKRQD----IRNMVATLKKSGVNQIDGNVLIDTSIF-ASHDKAPGWPWNDMTQCFSA 162 D L D + N+ + +G+ +D +V++D +F + + G Sbjct: 164 DCLLVDADPLAGLENLAEQVAAAGITAVD-DVIVDDRLFCETQMMSEGL----------- 211 Query: 163 PPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVV 222 +V+ N V++ + T+ S+V T GS A Sbjct: 212 -VTPIVVNDNLIDVTIVPGREGEPATADWRPRSSAYTIESRVVTGAPGSDPAVAI---PA 267 Query: 223 PGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQ--- 279 +TG +P + P+ L V+ A++A ++ D L+ AG+ + Sbjct: 268 YTGQALIEVTGTVPADAGPVNLTSNVEIPAAFARSLFIDALENAGVAVVAPAAGENPSGR 327 Query: 280 -VNEPGTV--VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 +E G+V VA S P + K+ LK S N+ A+ + +I T AG Sbjct: 328 LPDEYGSVGRVAELVSLPFSEYAKVTLKVSQNLYANCLLGIIAAHEG--YDTVEAGLFVE 385 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 L ++ GV+ ++ADG G S N I+P + Y+A D LP+ G D Sbjct: 386 GAFL-EEIGVNPDTLLLADGEG-SIVNRISPLAATDLAAYMAGTDLYAPLSDALPVLGVD 443 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQG----------VYNLAGFITTASGQRMAFVQYLS 446 G+L A G G + AKTG+ G L G++TTA G + F Y++ Sbjct: 444 GTLAANAKPGDPGY-GAIRAKTGTSAGGDQQGGIFLYTRGLLGYMTTAKGTPVTFAIYVN 502 Query: 447 GYA 449 A Sbjct: 503 NIA 505 >UniRef50_A3I000 Hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I000_9SPHI Length = 435 Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats. Identities = 93/467 (19%), Positives = 168/467 (35%), Gaps = 47/467 (10%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 +I ++SC +VQ N + + + ++ M+ + +D +S + +PAS K Sbjct: 8 LLILVSSC---TVQKINKSLKNSDVLSQGHMGFMLLDPESDKVLVDINSDKYFIPASNTK 64 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKRQDIRNMVATLK 124 + T + LG + N N + KGD L+ DP L D+ N + Sbjct: 65 LFTFYTSYSILGDELV---------NGLNYLEKGDSLIFWGTGDPGLLHPDLDN---EVA 112 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + + D ++ + + PGW W+ ++ +A V N Sbjct: 113 INFLRASDKDLYLLDNFGQVDAFGPGWSWDWYNYYYATERSALPVYGNIVRFKFEEGQNN 172 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 ++ R + L ++ N F+ S+P Sbjct: 173 FTISPERFKPF-----------LEAKKTDSWNGYRFRRDRYKNLFSYQFTDVVPSDPFET 221 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV-VASKQSAPLHDLLKIML 303 A +A +L + SG +R Q Q+ P + M+ Sbjct: 222 DIPFVTSAEFAAQLLTEA--------SGKKVRVIQNEAYFQEDPIKLQTTPADSIYAQMM 273 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 K SDN +A+ + ++ N T A + + +L+ I DGSGLS N Sbjct: 274 KISDNFLAEQLMLLVSDQLSNQLSTSDAIAYSKENLLKDL----PDEPIWVDGSGLSAKN 329 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 + P +++ +L I + P G G+++ G + AKTG+L Sbjct: 330 MFTPRSIIALLGKIRAEVPLEKIKAYFPAGGESGTIRN-WYKADEGQPAYIYAKTGTLSM 388 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 L+GF+ T SG+ + F L+ YA+ ++ + E LY Sbjct: 389 SNALSGFLITKSGKILHFSCILNNYALSGSELKRE------LEKTLY 429 >UniRef50_Q5ZVH0 Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Legionella RepID=Q5ZVH0_LEGPH Length = 553 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 93/486 (19%), Positives = 177/486 (36%), Gaps = 82/486 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A L V + ++ +S S +K+ + L + G D++ T + G Sbjct: 61 KKALWGLRVVDLDTGNVLLNLNSSTQFYIGSVRKIFSVGELLNERGADYQSVTRVHYDGV 120 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRN--------------------------------M 119 V NG L G+LV D T+ + + + + Sbjct: 121 VHNGNLNGNLVLVASGDLTMGGRTLPDGHVAITEYDHNEANSLGNAIITQTNLLAGYQYL 180 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + K+G+ I G+++ID +F + + ++ + + + Sbjct: 181 AKQVYKAGIRSISGDIVIDDRLFEPFNFRGEFD-----------VTPIFINDDVVDIVIL 229 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV-----VPGDLNRFTLTGC 234 + + + T+ +Q+ T+ E + PG + G Sbjct: 230 PSLINENANVSWLPHSSAFTVINQLLTVNPHEKYNLELESKLPACIGKPGCSG--IIKGH 287 Query: 235 LPQR-------SEPLPLAFAVQDGASYAGAILKDELKQAGITWSG---------TLLRQT 278 LP + PL F + ++YA I + L++AGI S LL+ T Sbjct: 288 LPINFIPPLTHNYPLVQTFRITKPSNYARTIFIEALQEAGINVSSIDKTKENPKKLLKST 347 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 + +A+ +S PL + +K +LK S N+ ADT + G + + + ++ Sbjct: 348 NLYNKNNKIAALKSLPLGEHVKYILKVSYNIGADTSLVLYGLTKGAR--SMIESLNVEKK 405 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 IL ++ G+ DGSG +++ L +++ F + LP+ DGS Sbjct: 406 ILDKKYGISPSEYHFIDGSGGG-ETKATNTAIIKWLTIMSKRPVFNIFYNSLPILAVDGS 464 Query: 399 LQYRAGLHQ----AGVDGKVSAKTGS---------LQGVYNLAGFITTASGQRMAFVQYL 445 L +G G+V AKTG+ L +LAG+I + R+AF + Sbjct: 465 LGSINNFQSDPSLSGATGRVHAKTGTYVLGNESGMLVKGRSLAGYIISKKNHRLAFALVV 524 Query: 446 SGYAVE 451 + ++ Sbjct: 525 NNIPIQ 530 >UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M516_GRAFK Length = 445 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 86/483 (17%), Positives = 171/483 (35%), Gaps = 66/483 (13%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + S +I S I + + D + + + + +++++ P Sbjct: 16 LFLSSLLIISCSAIKKTNKEIETDFHESPVFKKGYAGFALYDPAIDKMLYTHNAEKYFTP 75 Query: 61 ASTQKVITALAALIQLG---PDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKRQDI 116 AS K+ + L LG P ++TT GD L+ + DP+ ++ Sbjct: 76 ASNTKLFSLYTGLKILGGSIPALKYTT-------------VGDSLIFKGTGDPSFLNPEL 122 Query: 117 -----RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 N + D + +F GW W+D +SA + Sbjct: 123 PKSHVWNFL--------KNSDKKLFYAPPVFKEKRLGSGWAWDDYDSYYSAEKIDFPIYG 174 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 N + S P + + + + +Y + ++ + Sbjct: 175 NLIEIKFEKGA--------SKPSIKPGLLSDSIHAIKPAKVKNKYVQREIASNKMEY--- 223 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA--- 288 ++ P F +++ ++ L S TL R+ ++ T Sbjct: 224 ------QNFPREEDFTQNIPFNFSSELIVKLL-------SDTLNRKVEIYRGDTKTLKFN 270 Query: 289 -SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 + S P + K M++ SDN IA+ + M + T D +++ G Sbjct: 271 KTLYSVPGDSIYKRMMQVSDNFIAEQILLMAADKISDSLKT-SIAIDYMKE---NYLGDL 326 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 + DGSGLSR+NL P +M+++++ I + + +L G G+L+ Sbjct: 327 LDEAKWVDGSGLSRYNLFTPRSMIKLIEKIEKEMPKEELFKILAAGGESGTLKNYYKAET 386 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 + AKTG+L+ ++L+GF+ T SG+ + F S Y V ++ + ++ Sbjct: 387 P----YIYAKTGTLRNNHSLSGFLITKSGKTLIFSFMNSNYTVPTSELKQGMTRILEMIR 442 Query: 468 RLY 470 Y Sbjct: 443 DNY 445 >UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precursor] n=1 Tax=Desulfotalea psychrophila RepID=Q6AJD7_DESPS Length = 413 Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats. Identities = 103/443 (23%), Positives = 177/443 (39%), Gaps = 68/443 (15%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R ++ L + + + + G ++ + +PAST Sbjct: 14 RLLLVLLAWVFLPTGWVSSSSLQEDIDHGGYWF------TTTSKPLRLKETTGFIPASTT 67 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TALA L LG D+RF+T G KG L G DP L ++I + LK Sbjct: 68 KLVTALAGLRILGSDYRFSTDFLYDG-------KGALTIIGGGDPLLISEEIDKICRALK 120 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 GV+++ + ++TS+F H P Q + A A +V+ N +V + Sbjct: 121 LRGVSRV-HTLRLETSLF--HLPQPALGTEQTEQPYDAHNGALVVNFNSINVRV------ 171 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 D I +++ + ++ ++ + +R + + P+ Sbjct: 172 -DETGIVLSAEEQTPQLALMK------------DIVGLEAGKHRINVNQMVADDLPPVL- 217 Query: 245 AFAVQDGASYAGAILKDELKQAGI-TWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 Y+G + LK+ GI T + R V + V+ + S L + + L Sbjct: 218 --------RYSGELFLALLKRNGINTEDARIARGKAVEKSQLVLHWQSSCNLQETIGKCL 269 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 K S+N IA+ +F IG ++ P TW G A+ ++ ++ + +GSGLSR N Sbjct: 270 KYSNNFIANQIFLQIGLHQYGAPATWEKGRRALNTFIQNDLRIEKSQLQLVEGSGLSRDN 329 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 I+P M+ VL +N + S+LP + KTG+L+G Sbjct: 330 HISPRAMITVL------ENFAPYHSLLPY----------------NSQTRTFIKTGTLRG 367 Query: 424 VYNLAGFITTASGQRMAFVQYLS 446 VY LAGF + FV +L+ Sbjct: 368 VYCLAGF-QPRGEKLYPFVIFLN 389 >UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWF5_DYAFD Length = 424 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 165/466 (35%), Gaps = 53/466 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + F II L+ C A + + + + + + + +V Y + +P Sbjct: 4 LLFIISIIVLSGCSASHFLKREITR--SAVLSQQHTGISITRVNEQKAMAAYQDNKYFVP 61 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI--RN 118 AS K+ + A L LG ++ +E G L L+ R DP+L D+ Sbjct: 62 ASNTKLFSFYAGLSALGD------SIPGLEYLEWGEL---LIIRGTGDPSLLHPDLPSSK 112 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 ++ LK + F + PGW W+D + A V N Sbjct: 113 VLDFLKSR-----KEPIFFTPYHFENKRFGPGWAWSDYNDYYQPEVTAMPVYGNIVRFQS 167 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 + K R ++ + T+ + EL + Sbjct: 168 QNGGK------YRAHPHFWQKSMVEDTTVS----GIERDELQNIFHYPKT--------AG 209 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 ++ + V +L D LK+ I L + + S L Sbjct: 210 TQWITKDIPVHMTDQLTLQLLSDTLKKE-IKLINIPLE--------IELQTVNSIASDSL 260 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 M++ SDNM+A+ + + A T +A + AV L + DGSG Sbjct: 261 YTRMMQASDNMLAEQLMLLYATANKLPLSTEKAIAHAVEHHLADL----PDKPVWKDGSG 316 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+NL P TM+ +LQ I + +LP G G+L+ + AKT Sbjct: 317 LSRYNLFTPRTMVALLQKIYAKVPQERLFRILPAGGKTGTLKNLFKEEPP----FIFAKT 372 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 GSL VYNL+G++ T G+ + F + + AD R ++ Sbjct: 373 GSLSNVYNLSGYLITRKGKVLVFSFMNNNFTKPTADVRKEVERILT 418 >UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUJ7_DESOH Length = 435 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 167/449 (37%), Gaps = 73/449 (16%) Query: 2 RFSRFIIGLTSCIAFSVQA---ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMA 58 R R + L + + A A + ++QL + +++VQ++ + + + Sbjct: 23 RAVRTVAVLATAMVLCTVAFAPAFAERPLSQLLEPGD-SVLVQRMDDGRVVLAENPDTLL 81 Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN 118 +PAS K++T+LAA LG DFRF T T GDL+ + DP+L ++I Sbjct: 82 VPASILKIVTSLAAFEILGKDFRFITEFYTTPG-------GDLIIKGYGDPSLVSEEIE- 133 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 A + + + G++L+D S FA PG +Q + A A + N +V+ Sbjct: 134 -AAAFRIAAMVPSVGDILVDASFFAPGIAVPGRKIG-SSQPYDAVNGALCANYNTVNVTR 191 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 D ++ P+ F++ R + ++ Sbjct: 192 K------DGRYVSAEPQTPLLDFARRRIARMDPFSGRVAFIEDASA-------------- 231 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-RQTQVNEPGTVVASKQSAPLHD 297 A YAG + L++ G SG + + + S+ L D Sbjct: 232 ------------AALYAGELFAWFLEKHGCHVSGKVACGRVEKGRDTLEFTHVSSSALGD 279 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ +L+ S+N A+ + G + P G AV+ ++ +D + +GS Sbjct: 280 NVEKLLRYSNNFTANQLLLACGAKAYGPPADLARGVAAVQDYVKTVLAID--GMKVVEGS 337 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR N ++ M VL P AG V G K Sbjct: 338 GLSRENRMSARMMAGVLAAFE------------PYAGR------------MRVFGNEYYK 373 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLS 446 TG+L GV AG+ G R FV + Sbjct: 374 TGTLSGVNTRAGYFLYEDGPRYLFVVMSN 402 >UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Micromonosporaceae RepID=A4XCT3_SALTO Length = 593 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 103/469 (21%), Positives = 178/469 (37%), Gaps = 89/469 (18%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A +D + G + + V V + A D + +PAS K++TA L P Sbjct: 188 AALDPLVNSAALGDRVNVSVTDVASGAILYDQGAADGTVPASVTKLVTAATVLAARDPGH 247 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLK---------RQDIRNMVATLKKSGVNQI 131 R T G G++V G DPTL + + A +K + Sbjct: 248 RIPTRAVA------GAAPGEVVLIGGGDPTLAVDGTGFYPGAARLDELAAQVKTALGGVA 301 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 V++D+S+++ PGW + +++ + A A + Sbjct: 302 PTRVVVDSSLYSGPVHEPGWDDDILSEGYGAAITALM----------------------- 338 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 + +L+ D + A V++ Sbjct: 339 --------------------TDGARSDLEQAKRD------------HDDGRHAAKRVKEP 366 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNE--------PGTVVASKQSAPLHDLLKIML 303 +AGA L +G + R T PG+ + +S P+ L+ IM+ Sbjct: 367 DLHAGAAFAQLL----GVPTGAVERGTAPEAGADATAGAPGSELGVVESLPMVRLVDIMI 422 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 SDN++A+ + R + AR P ++ ++++R + + G+ + +ADGSGLSR N Sbjct: 423 SDSDNVVAEVLARQVALAR-GQPASFSGAAESMRAV-AGELGLPVAALTLADGSGLSRAN 480 Query: 364 LIAPATMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQAGV-DGKVSAKTGS 420 I+P+ + +++ A LP+A + G+L R A G V AKTG+ Sbjct: 481 RISPSLLTDLVRLAADGSRPELATLFGGLPVAAWSGTLTKRYTDVAAQAGAGMVRAKTGT 540 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 L GV+ +AG +TTA G+ +AF R+ L R + L Sbjct: 541 LTGVHAIAGLVTTADGRLLAFAVLTD--RAPDDGLTAARVALDRITAAL 587 >UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S666_CHRVI Length = 409 Score = 240 bits (613), Expect = 7e-62, Method: Composition-based stats. Identities = 93/441 (21%), Positives = 166/441 (37%), Gaps = 70/441 (15%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R ++ + + A D+ + Q+ A +L+V++ G I Y ++ +PAST Sbjct: 21 RLVLIAALWLGLA-HTALADDPVAQVRALPQASLLVKERGQDR--IAYQAETARIPASTM 77 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA AAL G D RF T + + G L + ADP L +++ +VA LK Sbjct: 78 KLLTAYAALETWGRDHRFHTDVFQDAS-------GWLWVKGAADPYLVSEELDRLVAALK 130 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + GV ++ G + +D S+F + G + + + AP A + N Sbjct: 131 RQGVRRVAG-IGLDDSLFDPDVEIAGRSSS--SNPYDAPVTALAANFNTL---------- 177 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + +R R + L L R G + Sbjct: 178 -----------------NLIREGERIRSAEPQTPLTATGERLGRSGAAGKQRINLREREI 220 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 A Y G +L +L+ A I ++ ++ S L +++ ML+ Sbjct: 221 AL------RYFGELLAAKLRAADIEVGDPQRIAPTPSDAKRILRHANSRTLAEMVAPMLE 274 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 S N +A+ +F + + + +++ G I DG+GLSR N Sbjct: 275 YSSNFVANALFLRLAAPDGQGRISMTQAKRTMTDFAQRRFGW--TAFKIDDGAGLSRANR 332 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 ++ ++++L A YR + Q D V AKTG+L+G+ Sbjct: 333 LSARQLVELLDAFAP---------------------YRDLMPQQDDDPNVRAKTGTLRGI 371 Query: 425 YNLAGFITTASGQRMAFVQYL 445 + AG++ G F + Sbjct: 372 SSYAGYVR-RGGAWEPFALLI 391 >UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQK2_SACVD Length = 517 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 104/467 (22%), Positives = 170/467 (36%), Gaps = 105/467 (22%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 A +D+ +T G L V + ++ Q PAST K++T+ AAL+ L D Sbjct: 128 AAIDDLVTDPALGTLLG-SVVDPATGTTLWERNADQALAPASTTKLLTSAAALLVLDHDM 186 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKR------------QDIRNMVATLKKSGV 128 RF T + G G +V G D TL + ++V ++++ Sbjct: 187 RFPTKVVA------GAEPGTVVLVGGGDVTLSSLPEGEESIFPGAAHLDDLVEQVREATG 240 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 Q+ V +D S F G W P D+ Sbjct: 241 GQVS-RVELDLSAFTGPT--EGRDW-----------------------------APEDVP 268 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + PV + G T G + + Sbjct: 269 STYMVQTQPVMLD----------------------GGRTDPTDEGSMGR----------- 295 Query: 249 QDGASYAGAILKDEL-KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 D A + + L +AG T T E V+ S P+ +L+++ L +SD Sbjct: 296 SDPAGHLVETFAERLGAEAGGT--------TTAPEGAKVLGEVWSPPVDELVRVALVESD 347 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++++ + R + A P ++ ++A ++L + GVD+ + DGSGLS N I P Sbjct: 348 NLVSEVLARQVAIAEGKQP-SFEGAAEATLEVLSRH-GVDVTGVELNDGSGLSPSNRIPP 405 Query: 368 ATMMQVLQYIAQHD-------NELNFISMLPLAGYDGSLQYRAGL-HQAGVDGKVSAKTG 419 AT+ Q+L A D + LP+AG G+L R G V AKTG Sbjct: 406 ATLTQLLAMAASPDTDNEVTVKLRPLLDGLPVAGGSGTLSTRYDQGPATQGRGWVRAKTG 465 Query: 420 SL--QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 ++ + V+ LAG + T + + F +G +R +R Sbjct: 466 TIPVERVHTLAGVVLTEDDRVLVFALMSNGGDSGAPAALDRISARLR 512 >UniRef50_Q47KT6 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Nocardiopsaceae RepID=Q47KT6_THEFY Length = 464 Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats. Identities = 105/449 (23%), Positives = 169/449 (37%), Gaps = 84/449 (18%) Query: 23 VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRF 82 +D+ ++Q G L+ V + + +PAST KV+T++AAL LGPD + Sbjct: 68 LDDPMSQSGIGEGLSAYVIDAETHQELYARDADEGLVPASTTKVVTSVAALHVLGPDAQI 127 Query: 83 TTTLETKGNVENGVLKGDLVARFGADPTLKR-------------QDIRN-MVATLKKSGV 128 T + G ++V G DPTL +++ A L ++GV Sbjct: 128 HTDV------VQGASPEEIVLVGGGDPTLTENADPHRYPRLASLEELAEQTAAALSEAGV 181 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 + + DTS +A PGW + + +A A +VD V + G + Sbjct: 182 TAV--RLGYDTSAYAGEPLGPGWKQGYIDEGSTASVHALMVDCGLARVI----DECGRID 235 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + Y P V Sbjct: 236 IPVESKYGP-------------------------------------------------RV 246 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 D A +L +AGI+ T + TQ ++A S P+ L++ L SDN Sbjct: 247 ADPPLAAAEAFARKLDEAGISVLETP-QPTQAPAGAELLARVSSPPISALVEKTLMDSDN 305 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 +A+ + R + A+ P ++ + AV ++ + + + ++DGSGLS I Sbjct: 306 NVAEALARQVAIAQGEEP-SFAGAARAVMAVMDE---LGVAGVQVSDGSGLSVDTRITSK 361 Query: 369 TMMQVLQYIA--QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK--VSAKTGSLQGV 424 + +L A + +S LP A GSL R G V AKTG+L GV Sbjct: 362 ALATLLVLAADPERPELYPVLSGLPTAHSTGSLSARYAPESDAASGAGLVRAKTGTLNGV 421 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPA 453 +LAG I TA G+ + F + + A Sbjct: 422 SSLAGTIYTAQGRLLVFAFVANHPSATGA 450 >UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HI4_THICR Length = 415 Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats. Identities = 93/449 (20%), Positives = 169/449 (37%), Gaps = 77/449 (17%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 ++ + + + + ++ E ++QL L L Q P I+ + ++ +PAST K+ Sbjct: 14 LLLGSFLLHAAPASVSLKEALSQLHETGVLMLNAQ----QEPVIEKDASKLRVPASTTKL 69 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA----T 122 +TA AL G D+RF T L + DP L ++I+ + Sbjct: 70 VTAYLALKHWGADYRFKTDFYITRTTHG---TSSLWVKGYGDPFLVSEEIQKLAENLAYR 126 Query: 123 LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 LK SG+ +D +++DT F ++ PG D + A P A + N + Sbjct: 127 LKASGIKTVD-EIILDTGYFETNVVLPGRSNTD--NPYDAIPGALAANFNTLYL------ 177 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 K A + P+T L V G + Sbjct: 178 KKVRGAIVSAEPQTPLT------------------PLAVALGKHTNL--------KHGRF 211 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTL----LRQTQVNEPGTVVASK-QSAPLHD 297 L + G Y +L L+++GI + + L Q + S L + Sbjct: 212 NLGGNAKTGERYFAELLSVFLQRSGIAVAQNVKWRSLNHQQDLKESPPFYRHLNSLTLAE 271 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 +++ M++ S N IA+ + + R VP + +R L G + + DG+ Sbjct: 272 IIQPMMRYSTNFIANQLALKLSAERLGVPASPEKVKQMMRTDLTHYLGW--QDFYLEDGA 329 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLS N ++P ++ +L+ + S+LP ++ ++ AK Sbjct: 330 GLSHQNRLSPQQLVVLLEA------FRPWKSLLP-----------------EIEDQIFAK 366 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLS 446 +G+L GV LAG+I + F ++ Sbjct: 367 SGTLIGVSTLAGYIYQQQ-HWLPFALMIN 394 >UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKM6_DESAH Length = 393 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 105/469 (22%), Positives = 174/469 (37%), Gaps = 81/469 (17%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M F I L VQ+ I P + +V + Q +P Sbjct: 1 MPFLHKWILLLFLAMALVQS---PGAIAGTPK---IGYLVAD-SHGKVMDALNPDQAFVP 53 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR--- 117 AST K++TAL A +LG +FRF T + L + DP + + + Sbjct: 54 ASTFKLLTALGAFNELGENFRFKTKFFLGPDR-------TLKIKGSGDPLITSEILEKSC 106 Query: 118 -NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 ++ + L K GV+ I +++D F + PG T + A A + N S Sbjct: 107 CDLASILLKKGVSTIK-TLVVDNLFFEPDIQIPG--TGGSTNPYDAGVNALSANFNTVSF 163 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 D + P+ F++ R L G D R L+ Sbjct: 164 RF----DKHDGQLLSGEPQTPLLSFTRPRILASG-------------LDRGRIVLSR--- 203 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA-PL 295 + +YAG ++K L+Q GI G + + QV + + + S L Sbjct: 204 ------------IESRTYAGRLVKFFLEQKGIKVMGGV-EEGQVLQQDLHIYTHVSPYTL 250 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +L++ +L+ S+N +A+ +F G A F+ P + A+R G+ N IA+ Sbjct: 251 AELVRQLLQFSNNFMANQIFLTAGAAAFSPPASLEKSVGALRAYASNTLGI--ENISIAE 308 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSG+SR N I+P M++VL H + +N R + Sbjct: 309 GSGISRRNRISPREMLKVLMAFKSHYSLMN--------------HERDEFY--------- 345 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 KTG+L GV G+ T + F+ ++ + R +V+ Sbjct: 346 -KTGTLDGVRTRVGYFTGKNNSLFPFIIMINQQGQGYKIIKERLKSMVQ 393 >UniRef50_C0ZYE1 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZYE1_RHOE4 Length = 530 Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats. Identities = 99/504 (19%), Positives = 177/504 (35%), Gaps = 85/504 (16%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGA------------NLALMVQKVGASAPAIDYHSQ 55 + LT+C A + + Q+P A + ++ ++ Sbjct: 18 VVLTACSAKPSNSDSASAPAQQVPEEAARIMATDPYAMARWSYLLVDPATDEVVYSNNAD 77 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 AS K T A LG D TT + G L GDLV D L ++ Sbjct: 78 SSMFLASQTKHFTVGTAYDTLGVDHTVTTPVYATSLPVEGTLTGDLVLVGSGDLALGGRN 137 Query: 116 ----------------------------------IRNMVATLKKSGVNQIDGNVLIDTSI 141 + ++ + +G+ +++G+VL+D + Sbjct: 138 AAQGRFDFATDGIDHVYADALPGAVLAPGDPLAGLNDLARQVADAGITRVNGDVLVDPRL 197 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 + ++ G + V+ + + A + + Sbjct: 198 WDTYSTVEGLVP------------SIFVNDSLVDIQASPGAVGEPAAIDMLPGNGLFRVD 245 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 +QV T GS D P D + +TG +P L + + + D ++A + + Sbjct: 246 AQVTTGEEGSDSTLKVAAD--PSDPTQLDVTGSVPAGKTSLTV-YRITDAPTWARQLFVE 302 Query: 262 ELKQAGITW-------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 L++ GI S L + VAS QSAP+ + ++L S N A+T Sbjct: 303 ALRRNGIEVASVSRTNSTAALPVDRTYSGSRQVASLQSAPISESGGMILATSYNTGANTF 362 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 ++ A + + G VR L ++AG+ + ++ DG G + PA ++Q L Sbjct: 363 LCLLAVATGS--SSCSDGLPTVRA-LAEKAGIAASDLVVMDGQG-GDPSQSTPAAVLQWL 418 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV---------- 424 ++ Q F + P+ G GSL + GKV KTG+ V Sbjct: 419 DWVDQQPWADTFWAGQPVLGERGSLSGVG--TDSPAKGKVIGKTGTSADVESDTGRLIVT 476 Query: 425 -YNLAGFITTASGQRMAFVQYLSG 447 L+G++ T +R+ FV +S Sbjct: 477 LQALSGYMITPDDRRLLFVVAVSD 500 >UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Deltaproteobacteria RepID=Q1NK58_9DELT Length = 428 Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats. Identities = 106/429 (24%), Positives = 175/429 (40%), Gaps = 66/429 (15%) Query: 45 ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVAR 104 ++ + PAST K+ TAL AL +LG D+RF T T G+ DLV Sbjct: 39 DGRLLAAHNLDRPLTPASTWKIATALLALERLGEDYRFQTLFYTAGD--------DLVIE 90 Query: 105 FGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA-SHDKAPGWPWNDMTQCFSAP 163 DP L +++ + A L +GV +++ N+++D S F H PG + + A Sbjct: 91 GRGDPLLVSEEVAAIAARLAAAGVKRLE-NLILDDSFFRLEHSPPPGAGTS--RRSHDAA 147 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 A +V+ N + + +A + + Q TLP A + Sbjct: 148 NGALVVNFNTVHLEIGTAGQVS-------------SAEEQTPTLPLMHKLA-----TGLA 189 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 +R LT C + Q Y+G + + L Q GI G ++ + + Sbjct: 190 AGRHRLNLTSCDVTEHGACE--VSKQYSQRYSGELFRHLLAQHGIEIDGNVVSGRRPADS 247 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 + S L +++ ML S+N +A+ + + A P TW G + L ++ Sbjct: 248 QLLYRHHSSRTLAEVVAEMLLYSNNFVANQLLLTVA-ALEQPPATWEKGRQTLAAYL-EE 305 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA 403 AG+ + +A+GSGLSR N I P + +L+ H +LP Sbjct: 306 AGLAANSFQVAEGSGLSRANRITPRALGHLLELFKPH------AQLLPR----------- 348 Query: 404 GLHQAGVDGKVSAKTGSLQGVYNLAGFIT--TASG--QRMAFVQYLSGYAVEPADQRNRR 459 +G+ K+G+L+GVY AG+ A+G FV L +PA+ R+R Sbjct: 349 -------EGQKLLKSGTLRGVYAYAGYFQHPAANGAAGLDPFVLIL----EQPANTRDRA 397 Query: 460 IPLVRFESR 468 + L+ R Sbjct: 398 LELLEQHYR 406 >UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI39_DESAA Length = 417 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 94/429 (21%), Positives = 166/429 (38%), Gaps = 74/429 (17%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 + ++ + I +L G +L+ + Y+ + PAST KV T+L AL LG D Sbjct: 44 SKDLPQSIARLL-GPKDSLLAEN-SKGEILYSYNPNALRTPASTFKVFTSLLALKILGED 101 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 F F T + G +G+L + DP L + + + + + +++D+ Sbjct: 102 FHFKTEIYQDG-------EGNLKIKGYGDPLLISEVLEPLAGEIAFR--TKSCKQIVLDS 152 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 S F + + PG + AP A V+ N + A A + Sbjct: 153 SYFKTPLEIPG--TGSTANPYDAPVGALCVNFNTVFFT-CDANGKLASAEDQTPLIPFAE 209 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + + LPRG A ++ + + TL YAG +L Sbjct: 210 KIIRSKKLPRGRA--------LLTQEHEQTTL----------------------YAGHLL 239 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA-PLHDLLKIMLKKSDNMIADTVFRMI 318 + L++ G+ +L +V T++ +S L ++ L+ S+N I + VF + Sbjct: 240 RYFLREKGVVCGEVVL--GRVKPGDTLLFEHESPYSLTEVAGKALEFSNNFIVNQVFLSV 297 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 G P T + R+ + G+ + I+A+GSGLSR N I + MM+VL+ Sbjct: 298 GAHEKGAPATLENAVNTAREFAAKDLGI--KDLIVAEGSGLSRKNRITASQMMKVLRAFQ 355 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + +++ V KTG+L GV L G+I Sbjct: 356 PYQTLMHYEDG------------------------VWYKTGTLHGVRTLVGYIPEGDSDG 391 Query: 439 MA-FVQYLS 446 + FV +++ Sbjct: 392 LTRFVIFIN 400 >UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XXH2_PEDHD Length = 450 Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats. Identities = 90/439 (20%), Positives = 158/439 (35%), Gaps = 56/439 (12%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG---PDFRFTTTLETKGNVE 93 + + + + H+ Q PAS K+ T A L L P R+ Sbjct: 59 GFALYDMATARMLFERHADQYFTPASNTKLFTFYAGLKMLPDSIPSLRY----------- 107 Query: 94 NGVLKGD-LVARFGADPTLKRQDIR--NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 V +GD L+ DP+L + ++ + LK S + + G Sbjct: 108 --VERGDSLIFWGTGDPSLLQSKLKGTKAMEFLKAS-----PKKLFYAPGRYTGDFYGSG 160 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 W W+D + + A + N S+ + ++ L Sbjct: 161 WQWDDYNEYYQAEINELPLMDNLLSLKAENGRLSMVPRLLKDC-------------LSAD 207 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 S + Q N F P PLP ++ + Y ++ + Sbjct: 208 SGDTQKTFSVTRDFYTNHF----KYPA--IPLPAGYSQEVP--YKVSLPLTLSLLSDTLK 259 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 +L + ++ V + ++ +LK M+ SDN IA+ + + + T + Sbjct: 260 KTVMLAKMKMPADAKTVYNMRT---DSVLKAMMLPSDNFIAEQLLLVYANQLGEELNTSK 316 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISM 389 A S + L + DGSGLSR NL P M+++L+ I + +N +M Sbjct: 317 AISYIEKTYLSEL----PDKPRWQDGSGLSRRNLFTPRDMIKLLELIYKQVNNPARLFNM 372 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 +P G G+L+ V KTG+L GV+N +G++ T G+ F + Y Sbjct: 373 MPAGGKSGTLRNAYPKTDQPF---VFGKTGTLSGVHNQSGYVLTKKGKTYIFSFMNNNYV 429 Query: 450 VEPADQRNRRIPLVRFESR 468 V AD RN + ++ + Sbjct: 430 VPTADVRNEMVRVMTYIHE 448 >UniRef50_B4V6I2 Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Streptomyces RepID=B4V6I2_9ACTO Length = 536 Score = 230 bits (588), Expect = 7e-59, Method: Composition-based stats. Identities = 99/473 (20%), Positives = 162/473 (34%), Gaps = 71/473 (15%) Query: 33 GANLALMVQKVGASAPAI-DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A L+ + GA + Q +P ST K+ LG RF T L G Sbjct: 61 HAQWGLLQTEPGADGRVLRSLFPGQFFIPGSTAKLFPVSGTWQTLGAGHRFVTPLYEVGK 120 Query: 92 VENGVLKGDLVARFGAD----------------------------PTLKRQD----IRNM 119 L GDL D TL ++ I + Sbjct: 121 RSGETLIGDLDLVAQGDLTMGGRTRPDGTVAYTDLDHTYANDFPGATLTPENPLAGIDQL 180 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 ++ SG+ +DG+V++D+ +FA P I++ N + Sbjct: 181 ARQVRDSGITGVDGDVIVDSRLFAPDPV------------LDPTPTPLIINDNLIDLLTT 228 Query: 180 SAPKPGDMAFIRVAS-YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 + G A + P + S V+T+ G R L+G + Sbjct: 229 PGDRAGAAARLDWRPKVAPYEVTSTVKTVAAGGPTDVTV---TATDGGTRIRLSGTIAAG 285 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWS------GTLLRQTQVNEPGTVVASKQS 292 + PL V D A++ L + L +AG+ + R + + VA+ S Sbjct: 286 AAPLLRTSPVTDPAAFGRTALIEALARAGVEVTSPATGPNPAARLPRDYDGRPRVAAYTS 345 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 P K++LK S N+ A+ ++ + G + L +AGVD Sbjct: 346 PPYEQYAKLILKVSHNLGANLDICLLAVTTGSHQ--CADGFPVLAGFL-DRAGVDRRQVE 402 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 + DG G + + P ++++L Y + F LP+ G DG L G Sbjct: 403 LMDGRGGNPADRATPRAVVRMLAYWQGTPDARRFREALPILGVDGLLAENC--RDCPARG 460 Query: 413 KVSAKTG------SLQ-----GVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 KV AKTG +L G +AG++ G+ F ++G + D Sbjct: 461 KVFAKTGAAVGGDALNDRFSVGAITIAGYLDKGGGRFDPFYAGVTGASTANTD 513 >UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I3D7_9SPHI Length = 435 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 98/478 (20%), Positives = 176/478 (36%), Gaps = 76/478 (15%) Query: 4 SRFIIGLTSCIA-FSVQAANVDEYITQLPAGANL--------ALMVQKVGASAPAIDYHS 54 I L C + FS D+Y+ A + + + + + +S Sbjct: 9 KILFIFLLFCFSQFSYGQLTRDQYLKLESALGDQSFFSKHLSGFELYDLDSQTVVFERNS 68 Query: 55 QQMALPASTQKVITALAALIQLGPD---FRFTTTLETKGNVENGVLKGDLV-ARFGADPT 110 +Q +PAST K+ T A + L R+TT +GD + DP+ Sbjct: 69 EQRFIPASTTKLFTLFAGVSILNDSTQTLRYTT-------------QGDTIRIWGAGDPS 115 Query: 111 -----LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 L + + + +A + V+ + S GW W+D +SA Sbjct: 116 WGYKELYQPEFKKFLAPFQ---------TVIFSDANQDSPAFGYGWQWDDYYYDYSAERT 166 Query: 166 AAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 + + N V + +P + +S YP ++ EL+ Sbjct: 167 SLPIFGNLVQVK-RNGNRPVVSPKVFQSSVYPTQRSTR--------------ELERDFHS 211 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 + R E +P ++ + + + + I S +L ++ QV Sbjct: 212 NRFYYNPNNFRGREEFIPFIYS---PELFT-QLASEATGKTWIYQSDSLPKENQV----- 262 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 +++PL +LK M+ +SDN +A+ M+ F T RA ++ L Sbjct: 263 ----WRASPLLPILKEMMLESDNFLAEQTMLMVSDRIFQRLDTERAIEYLLKTYLFDL-- 316 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 DGSGLSRHNL+ P TM+ + + I + + +LP G G+++ Sbjct: 317 --PDKPQWVDGSGLSRHNLMTPRTMVALFEKIYRMLPDDQLYELLPTGGVSGTIENSYQA 374 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + + AKTG++ ++L G I T SG+ F S Y + + R ++ Sbjct: 375 QEP----YIFAKTGTMSNNHSLVGLIKTKSGKIYCFAFMNSNYPYKASVVRREMEKVM 428 >UniRef50_A4AQH7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AQH7_9FLAO Length = 422 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 89/474 (18%), Positives = 167/474 (35%), Gaps = 63/474 (13%) Query: 1 MRFSRFIIGLTSCIAFSVQ----AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQ 56 + FS IG +S V+ + N D+Y Q ++ + + + +S + Sbjct: 8 LLFSFLFIGCSSARKSLVKKIDSSINSDDYNNQF-----TGFLLVDIESRDTIYNVNSTK 62 Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI 116 PAS K+ T +L L E ++ K L DP+ + Sbjct: 63 YFTPASNTKIFTLYTSLKLLP---------ERIPALKYIEKKDTLFVEGTGDPSFLHPSL 113 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 + K + NV + F PGW W+D +SA V N + Sbjct: 114 ND-STAFKFL---EKHDNVALHLDNFNDAKFGPGWSWDDYHYYYSAERNGFPVFGNILT- 168 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + + LP ++ + + +L + T Sbjct: 169 ---------------------IQNSDSLNILPSFFQDSIIDKEYYINRELEQNTFYFN-S 206 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLH 296 + + + + VQ G +L++ LK+ SG + V+ QS Sbjct: 207 TQKDTVEIPLMVQKG--LTKNLLENILKKEVRLVSGM------PSGEKKVLYGIQS---D 255 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 + + M++ SDN +A+ + ++G + + + D + L+ DG Sbjct: 256 SVFRRMMEVSDNFLAEQLL-IVGSSTLSDTLNSKKSRDFI---LKNHLSGLRQPPRWVDG 311 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR+NL P +M+ +LQ + + P G G+++ + + A Sbjct: 312 SGLSRYNLFTPESMVHILQKLYSEIPKERLFQFFPTGGVSGTIED---WYAGNTKPYIYA 368 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 KTGSL + L+G++ T SG+ + F + + + + R + Y Sbjct: 369 KTGSLGNNHCLSGYLITNSGKTLVFSFMNNHFMESSSVIKERMQTIFEEIRDNY 422 >UniRef50_C4LKM4 Putative penicillin-binding protein 4 n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKM4_CORK4 Length = 557 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 93/452 (20%), Positives = 164/452 (36%), Gaps = 69/452 (15%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A LA V + +S +PAS+ K++T AAL+ LGP R T + Sbjct: 132 ALGQLAGQVTDASTGKTLWEKNSSTAMVPASSTKMMTTAAALLTLGPKDRVRTVV----- 186 Query: 92 VENGVLKGDLVARFGADPTL----------KRQDIRNMVATLKK-SGVNQIDGNVLIDTS 140 + G G +V G D TL I+++ + +KK G + V+ ++ Sbjct: 187 -KRGTKPGQIVLVGGGDVTLAASKDNAFYTNAPTIQDLASQVKKNMGGQPVTSVVVDNSR 245 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTM 200 W D++ + +++ S +P+ + A + + Sbjct: 246 AGQGDTFNSTWSRGDISGGNVTSVDSVMLNGGRQDPSDADSPRTDNPALVAGQALANALG 305 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 S + A+ D + +G + Sbjct: 306 LSSSSSDDGNGADNAGDSGDFGESNDE----SGNSGGGDDN------------------- 342 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 G++ S + V+ + + +SAPL + ML SDNM A+ + R I Sbjct: 343 ----SQGVSVS-----KKSVDTEDGELGAVESAPLDIRIHDMLVNSDNMEAEAIGREIAK 393 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ- 379 P T+ + A +++L Q G + + ++ D SG+S N I P + +++ + Sbjct: 394 KE-GKPLTFEGATSATKEVLSQH-GFPLESVVLKDNSGMSPDNRITPRLLDRIMVKASSP 451 Query: 380 ---------------HDNELNFISMLPLAGYDGSLQYRA--GLHQAGVDGKVSAKTGSLQ 422 + + LP+AG +G+L R G G V AKTG+L Sbjct: 452 VTNEGNSDSSSADSQSHDLRPILDGLPVAGGNGTLAGRFTPGSSSGPGAGWVRAKTGTLD 511 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 GV L G + G+ + F +G +EPA Sbjct: 512 GVSALVGTVMNQQGRVLTFAFMSNGSDIEPAR 543 >UniRef50_D2QFU8 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QFU8_9SPHI Length = 400 Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats. Identities = 86/431 (19%), Positives = 143/431 (33%), Gaps = 56/431 (12%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG---PDFRFTTTLETKGNVE 93 + + G I +++ + PAS K+ + A L+ L P R+ T Sbjct: 17 GVALYDPGQKRALIQHNADKPFTPASNTKLFSFYAGLLSLHDSLPTLRYITR-------- 68 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 L+ +P L D+ + A + + + + + PGW W Sbjct: 69 ----NDSLIFWGTGNPLLLHPDLPDTTAL---AFLRSRPERLFFSPANYTGPRFGPGWAW 121 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 +D +SA A V N S P T+ Sbjct: 122 DDYNDDYSAELAPLPVYGNVVRFS--------------AGKTSPARFTDSTHTVADAPGG 167 Query: 214 AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT 273 E N+F P + + A +L D L +A Sbjct: 168 VYRTEF------GNQFVR----PANDKVKRQDVPFRWSGELAAQLLADTLHRAVGVVKMP 217 Query: 274 LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 ++ ++ + L K ML SDN A+ V M P A Sbjct: 218 IVANARLLRGSST---------DSLYKRMLFVSDNQFAEQVLFMASTEHSTGPLDPLAEL 268 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 L+ G+ DGSGLSR+N P ++ +L I + ++LP A Sbjct: 269 RRTADSLQHTTTFK-GSARWVDGSGLSRYNQFTPNVLIDLLSRIYARVPQQRLFALLPAA 327 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G G+L+ V AK+GS+ GVYNL+G++ T + + F + + + Sbjct: 328 GQSGTLKS----LDMKGKPYVFAKSGSMTGVYNLSGYVLTKRNRLLYFSIMHNNFTQTVS 383 Query: 454 DQRNRRIPLVR 464 + R R L++ Sbjct: 384 EMRRRTAELLK 394 >UniRef50_A4CNT5 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CNT5_9FLAO Length = 432 Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats. Identities = 85/473 (17%), Positives = 165/473 (34%), Gaps = 60/473 (12%) Query: 3 FSRFIIGLTSCIAFSVQAAN---VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 I + V+ N +++ + + +++ + ++++ Sbjct: 15 LGALAILVFLSGCSPVRKVNRHLNNQFQNEAHSNQFTGILLVDATSRDTLFSLNAEKYFT 74 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K+ T AAL L PD ++ + + DP+ D+ + Sbjct: 75 PASNVKLFTLYAALKTL-PD--------RVPALKYARHRDSVYVVGTGDPSALHPDLMDS 125 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 A + ++ S PGW W+D + +A V N + Y Sbjct: 126 TAL---KFIRGFPHVTMV-NSNLTDPAWGPGWSWDDFDAYYMPGRSAFPVHGNILRLIGY 181 Query: 180 SAPKPGDMAFIR--VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + R ++ SQ+R + + P Sbjct: 182 PDSLHVSPSIFRDSLSPRRGGRARSQLRNVFLRTPS----------------------PG 219 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 + +PL + G + +D +SG ++ + P T + + Sbjct: 220 DTLDIPLRIS--------GQLERDLWAA----FSGRVIVRGDTLPP-TPLETLPGMASDS 266 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 L M+K+SDN IA+ + ++ + + A + + L V DGS Sbjct: 267 LYAKMMKESDNFIAEQLMLLVSGTQSDTLSFEAARDRVLEEFLPGMPQVP----RWVDGS 322 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR+NL P +++ +L + + E ++L G DG+L + V K Sbjct: 323 GLSRYNLFTPESVVFLLDKLYREFPEPRLFALLAQGGQDGTLAEWYRDSASP---YVFGK 379 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 TGSL +NL+G++ T SG+R+ F + + + L+++ Y Sbjct: 380 TGSLSNNHNLSGYLVTLSGKRVCFSMMNNHFTQPSDVIKENMQELLQWVRENY 432 >UniRef50_C5PW65 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Sphingobacterium spiritivorum RepID=C5PW65_9SPHI Length = 454 Score = 225 bits (575), Expect = 2e-57, Method: Composition-based stats. Identities = 88/481 (18%), Positives = 174/481 (36%), Gaps = 55/481 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGAN------LALMVQKVGASAPAIDYHS 54 M+ F ++ + + + Q + A + +S + Sbjct: 18 MKLYLFSFFVSLLVYIMPVKGQISNDLQQKFSQAEGLKKHFYGFSLYDADSSRFLFGINE 77 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKR 113 ++ +PAS K+ T LAA+ L PD ++GD L+ DPT Sbjct: 78 EKHFMPASNTKIFTLLAAIHTL-PD---------SIPGLQYTVRGDSLIFWGTGDPTFLH 127 Query: 114 QDIR--NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 + + LK SG ++ + GW D + + + + Sbjct: 128 NRLDSHKVYNFLKSSG-----KHLYYVPTASKEPFYRNGWSVEDYDEYYQPEISTFPIYG 182 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 + + + +R Y V+ + + + D N F + Sbjct: 183 DVVTFRAR------EKGSLRATPEY-FQKDVHVKDDEKSKGKFKLTRA----FDKNIFYM 231 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 +G +R F D S +L D LK+ + E + V + Sbjct: 232 SGIDVKRGYVNEKPFKYSD--SLFLKLLVDTLKK---------DVKMISYEKPSDVKTVY 280 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA-GVDIGN 350 S + +L+ M+ SDN +A+ M ++ T R +R+ ++Q+ Sbjct: 281 SNSRNKMLREMMLPSDNFMAEQFQMMSSLVKYGEFDTNR-----LREWMQQEYYKYFTDK 335 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAG 409 + DGSGLS +NL+ P ++ ++L + + + + P G DG++ R+ Sbjct: 336 VDLKDGSGLSVYNLVTPRSIAELLVVLQKDIPDTEILHKLFPTGGVDGTI--RSAYKLDR 393 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + V AKTG+L V+ +G++ T SG+++ F + + + R + +V + + Sbjct: 394 GEPFVWAKTGTLNSVHCQSGYLITRSGRKLIFSFLNNNFVTSASTVRREMVNIVTYIRQN 453 Query: 470 Y 470 Y Sbjct: 454 Y 454 >UniRef50_D2S5C3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5C3_9ACTO Length = 538 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 98/475 (20%), Positives = 163/475 (34%), Gaps = 76/475 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A V + + + + AST K T LG D TT + Sbjct: 61 ETARWLYSVAEAETGRVVLAGRAGESVFTASTAKNFTVGTTYATLGTDATLTTPVYATAE 120 Query: 92 VENGVLKGDLVARFGAD------------------------------------PTLKRQD 115 GVL GDLV D P Sbjct: 121 PAGGVLAGDLVLVASGDLAMGGRGAMSGRVDHAFTAGTIDHVYGDIAPNAAFVPDGPLAG 180 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + ++ + SGV +I G+V+IDT ++ + D G P + V+ N Sbjct: 181 LDDLARQVAGSGVTEIAGDVVIDTRLWNTFDGQEG------------PAPSIYVNDNILD 228 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 +++ +A G A + + T + PGD T++G + Sbjct: 229 ITVTAAG-IGQPAVLDLRPQTQAVTVESTVTTTDAGTPTSLT-VAADPGDPTSVTVSGTI 286 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR--------QTQVNEPGTVV 287 + L + + AS+A + + L +AG+T + + V Sbjct: 287 AAGASQLTIH-RIPHAASWARTLFVEALGRAGVTVTSPAVGPNDQAGLPPAGSYPAEDRV 345 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 AS S P+ +++L+ S N A+ + ++ A P G AV L +AGV Sbjct: 346 ASLTSPPMKAFGRMILETSYNTGANALMCLLA-AHGGSPDCLD-GLQAVHSQL-DRAGVA 402 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 + ++ DG G + P M+ ++ + F + P+ G G+L Sbjct: 403 PEDVVLFDGQGADPAS-TTPDQMVAWTRWAQRQPWGEEFAAGQPVLGVSGTLASTG--QD 459 Query: 408 AGVDGKVSAKTGS-----------LQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 G+V+AKTG+ L V +LAG +TT G+R F +SG Sbjct: 460 DPAAGEVAAKTGTSVDVDPTTGRVLYKVQSLAGHLTTERGERFVFSLSMSGATYP 514 >UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxypeptidase n=5 Tax=Corynebacterium RepID=C8NJZ8_COREF Length = 421 Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 153/465 (32%), Gaps = 92/465 (19%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLA---LMVQKVGASAPAIDYHSQQMALPASTQ 64 I V + +++ +TQ A L V+ + PAS Sbjct: 46 IFRPVVATAEVDFSALNQQLTQAAADPRLGRFVGQVRDTATGEVIWSQNPDTPVRPASAT 105 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA AAL +LG D T + G G V R D TL + ++ A L Sbjct: 106 KILTAAAALYELGWDDTIHTDVVV------GQTPGTAVIRAAGDVTLSTDQLDDLAAQLT 159 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 ++ + L+DTSI W+D + + Sbjct: 160 GQDIDTV----LVDTSI-----------WSDE--------------------TFAPGWER 184 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 D+ +A PV + G + LP Sbjct: 185 IDIDAGYIAPVEPVMIE------------------------------GGRIGGSHGDLPR 214 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 A L T + V+A+ +S L L+ M++ Sbjct: 215 T---HTPALDVAQALAQ-------RIGATDTGKGTAPADALVLATTESENLEQRLRRMME 264 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +SDN++A+ + R R T + + IL++ G D+ I D SGLS NL Sbjct: 265 ESDNVMAEAIGRETAQNRGAATDTG-SSAQLTMDILKEH-GFDLRGVSIVDNSGLSFDNL 322 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I P + +L A + ++ LP+AG +G+L R G V AKTG+L Sbjct: 323 ITPRLLDDILHAAATDETLRPLLNTLPIAGGNGTLVDRYDDLSGA--GWVRAKTGTLTAT 380 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 LAG +T S + F + + D R + Sbjct: 381 SALAGTVT--SDRVYTFAFVSNDSNIP--DARAAMDEMASVLREF 421 >UniRef50_C0VXH6 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXH6_9CORY Length = 414 Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats. Identities = 103/458 (22%), Positives = 152/458 (33%), Gaps = 102/458 (22%) Query: 17 SVQAANVDEY--ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 V A E ++Q PA +V V + ++ PAS KV+TA AA+ Sbjct: 56 PVDPAQAPELEALSQDPALGEFFGIVTDVQTGETVWEKNADVPGRPASITKVLTATAAVH 115 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 L R T + G+ + G D L + + + Sbjct: 116 ALPAGHRLVTEVYADGDTS--------YIKAGGDVWLSDTSLDRLAGMVT-------TPR 160 Query: 135 VLIDTSIFAS-HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 V++DTS++ AP W D+ F AP ++ Sbjct: 161 VVLDTSVWDGFEPFAPTWDPADIDAGFVAPIEPVMI------------------------ 196 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 +Q R TG +P+ P Sbjct: 197 --------NQARIDAT----------------------TGDVPRSHTP------------ 214 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 A +L ++G T +G + V T + + +S L D L M+ SDN++A+ Sbjct: 215 -AQDVLASVAARSGATPAG----LSTVPPTATKIGTVESPRLDDRLNAMMDHSDNVMAEA 269 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + R + A+ DAV L + + D SGLS N IAP T+ Sbjct: 270 IGRELAVAKGATNP-----VDAVIAELHA-LSIPTDGLNLNDCSGLSADNRIAPRTIDIA 323 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 L A D + LP+A G+L R G G V AKTG+L LAG +T Sbjct: 324 LYTAATDDKLHPVLRSLPVAYGSGTLAERFGGKDG--QGWVRAKTGTLDATSGLAGTVTG 381 Query: 434 ASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 G F +G +D R L S L K Sbjct: 382 EDGSVYTFAFLSNG-----SDILAARESLDTLASALRK 414 >UniRef50_Q3AXV2 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=12 Tax=Cyanobacteria RepID=Q3AXV2_SYNS9 Length = 441 Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats. Identities = 92/422 (21%), Positives = 154/422 (36%), Gaps = 80/422 (18%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 ++ V D + +PAS QK+++ AL +LGPDFR T L N Sbjct: 63 WSISVLD-DRGQALADLNGGLARIPASNQKLVSTAFALDRLGPDFRLRTELLRHPN---- 117 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVA-TLKKSGVNQIDGNV----LIDTSIFASHDKAPG 150 G L DP L +++ + L + G + + L+ Sbjct: 118 ---GTLELVGEGDPDLSVAEVQRIAMVALGQGGSRRPSVSTQPVKLVVREEPRQRWWPSD 174 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 W D + + AP + N +++ + P QV L Sbjct: 175 WHPADRSYAYGAPITRLALTSNALYMAVMN----------------PAARLQQVLDLAIR 218 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 Q +L++ D +V+D S+ +E Sbjct: 219 RQGGQ-VQLELQDHD---------------------SVED--SFVEESFVEE-------- 246 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 V+E V+ ++SAP+H LL + +S N A+ + R +W Sbjct: 247 --------SVDEKSVVLHREESAPMHALLSLANTESHNFTAEVLMREAA-------NSWD 291 Query: 331 AGSDAVRQI-LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G ++ Q GV +G I DGSGLSR N + + +L +AQH + + Sbjct: 292 LGQASLITTRWLQAQGVPMGGVRIRDGSGLSRGNRLTTRAISTLLWRMAQHPLGSYYQAS 351 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 + +AG G+L+ R G + G+ KTG+L GV +++G + T G R +G + Sbjct: 352 MAIAGQRGTLRKRFG--STTLYGRFWGKTGTLSGVRSISGVLETKHGPRYV-SMISNGGS 408 Query: 450 VE 451 Sbjct: 409 AP 410 >UniRef50_C7PJX0 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJX0_CHIPD Length = 440 Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats. Identities = 92/489 (18%), Positives = 157/489 (32%), Gaps = 68/489 (13%) Query: 1 MRFSRFIIGLTSCIAFSVQAANV---------DEYITQLP-AGANLALMVQKVGASAPAI 50 MR R ++ ++F A +E +T P A+ + + + Sbjct: 1 MRSFRIVLSACLLLSFIKPVAAQYGPIRKWAEEELLTSAPLKQAHTGISIYEPATGKYWY 60 Query: 51 DYHSQQMALPASTQKVITALAALIQLG---PDFR-FTTTLETKGNVENGVLKGDLVARFG 106 +Y PAS K+ T L LG P R F T L + Sbjct: 61 NYQEDHYFTPASNTKIFTLYTGLRLLGDSLPALRYFRTDSA-------------LYVKGM 107 Query: 107 ADPTLKRQDI-----RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 ADP D ++ + +++ + + GW W+D + Sbjct: 108 ADPAFLHPDYNVQPAWQLLQQASQ--------PIVLVPAAIENKRFGSGWAWSDYADYYQ 159 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 V N V GD I MF+ + L Sbjct: 160 PELNEWPVYGNVARVR-----HHGDSTLIWP------RMFNDTVHFSVHRNDKLEELLTE 208 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 +NRF++T +S + G+ L+D L + IT + R Sbjct: 209 RDERINRFSVTYNGNDKSVQEGEIPFITGGSDDLVYRLQDTLHKP-ITIAAAGNR--PAP 265 Query: 282 EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR 341 +++ + P+ L + M+ +SDN A+ M ++ T R + + L Sbjct: 266 ASFSLL---RGIPVDTLFQPMMHRSDNFFAEQTLMMCSALLWDTISTARTIAFMQKSYLA 322 Query: 342 QQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQY 401 DGSGLSR+NL P + VL + + ++ P G G+L+ Sbjct: 323 NL----PDTPKWVDGSGLSRYNLFTPRDFVSVLSDMYKSYPSQRLYALFPTGGK-GTLKN 377 Query: 402 RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIP 461 V AKTG+L G L+G++ T + + F ++ + R Sbjct: 378 YYK------QQFVHAKTGTLSGCVALSGYLVTKKNKTLVFSVLVNNHNNSATAVRRTVER 431 Query: 462 LVRFESRLY 470 + Y Sbjct: 432 FLTQIWEQY 440 >UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C315E5 Length = 458 Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats. Identities = 101/443 (22%), Positives = 160/443 (36%), Gaps = 76/443 (17%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 I + P+ A V + D S ++ L AS K+ T ALI+LG D R TT Sbjct: 48 QIAKGPSAA--GAYVVDLSDGRVVFDDRSDRLRLSASVTKLYTTSTALIELGSDTRLTTH 105 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDI-----------RNMVATLKKSGVNQIDGN 134 + G GDL R D T + A L++SG+ + G Sbjct: 106 VLGVGRRSGATWSGDLYLRGAGDFTFGTAAFARKAYGSDASVERLAAELRRSGLRHVTGR 165 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 VL D S++ + F + L + P G VA Sbjct: 166 VLGDASLYRDNGGTE------------------------FPLVLCADPLFGRGCPYGVAG 201 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 + + + RT P NR A + A++ Sbjct: 202 AFERPIPNGPRT----------------PIGFNR---------GLRDATSAAPQRRPATF 236 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 A + L L+ AGI G+ + +AS +S L ++ K SDN AD Sbjct: 237 AASGLTRALRDAGIRVDGSA-GTARTPARARTLASTRSPAFARLAALINKPSDNYAADAT 295 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 R++G AR G+ G+ V + + G+ I GSG + + +P ++ +L Sbjct: 296 LRLVG-ARVAGDGSRAGGARVVSRTIADTFGLAPA---IRSGSGETLTDRTSPRQLVGLL 351 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS------LQGVYNLA 428 + + + F L AG DG+L+ +G+ K G+ N+ Sbjct: 352 RGMRERPEGRAFARSLSRAGRDGTLRR---FAGTVAEGRCQLKDGTRVDAKQANSTLNMT 408 Query: 429 GFITTASGQRMAFVQYLSGYAVE 451 G+ T+ SG+R AF L+G +E Sbjct: 409 GYCTSVSGKRFAFAVMLNGMRME 431 >UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W606_9ACTO Length = 465 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 104/428 (24%), Positives = 165/428 (38%), Gaps = 76/428 (17%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 +L A+ A+ + V +D+++ PAS+ K++TA A+L LG D R TT+ Sbjct: 84 DELVGTASTAVAIIDVATGQTLVDHNASTALTPASSNKLLTAWASLSTLGADHRMTTSAT 143 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 + G L G D L Sbjct: 144 FQ--------DGTLTLVGGGDVLLAAD--------------------------------- 162 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 + P A + ++ A K D A V T+F+ Sbjct: 163 -------------AGDPDAVVGHAGLGDLARDVAAKLADQAVTSVKLALDDTLFTGATFS 209 Query: 208 PR--GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 P EA + + D+ + T P QD A A L Sbjct: 210 PDWEAGNEAWVAPIQPLMIDVTSYGGTTAYP------------QDPAMEAAQAFATALTA 257 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 AGI+ G + R + V E +V+AS SAPL ++L + LK SDN + + R++ A Sbjct: 258 AGISIEGDITR-SHVAEGTSVIASVDSAPLSEILAVSLKASDNTMTEVEGRVLAAAT-GH 315 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE-- 383 ++ + AV + L+ G D+ + + D SGL+R + + + Q+L A D Sbjct: 316 EASFAGAAQAVLERLKAD-GFDVSDVTMLDCSGLARADRVPARLLAQILARAAGDDGGTV 374 Query: 384 -LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + I+ LP+AG DG+L R + G V AKTGSL +L+G + T G+ +AF Sbjct: 375 GRSLITALPVAGLDGTLHDR--FTEGAATGTVRAKTGSLDQTASLSGTVVTRQGRLLAFS 432 Query: 443 QYLSGYAV 450 + G+ Sbjct: 433 VIVDGFEA 440 >UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Arthrobacter RepID=B8H9S3_ARTCA Length = 509 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 104/456 (22%), Positives = 159/456 (34%), Gaps = 80/456 (17%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 +V AA VD + Q G +VQ D +PAS K++T++AAL Sbjct: 97 PAVLAARVDPLL-QADGGGTFTGIVQDALTGQVLFDRGGADGRVPASNMKLLTSVAALRA 155 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK-----------RQDIRNMVAT-- 122 LGP+ F T + G N V V G D L R + + A Sbjct: 156 LGPEHTFATRVVA-GPAANQV-----VLVGGGDVLLGPGESKPGEVMGRAGLTTLAAQTV 209 Query: 123 --LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 L+ +G + VL+D S+F P W D+ Sbjct: 210 ASLQANGATG-EIKVLLDDSLFTGPALNPAWQEGDV------------------------ 244 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 G++A + + V T PR AQ + G Sbjct: 245 --AAGEVAPVYPLAMNSARYDPAVTTGPRPQDAAQSAAEEFASRLRAAGAAAGLAVAAGV 302 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + + T E V+A QSA + + Sbjct: 303 ER--------------------------SPGAGSTKPTAGTERPEVLAEVQSATVASQVD 336 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 ++L++SDN +A+ + RM A PG+ + AV L Q AG+ G + D GL+ Sbjct: 337 LLLQESDNYLAEVMGRMASIADGG-PGSNDGATAAVSNQLAQ-AGIAAGPLTLVDVCGLA 394 Query: 361 RHNLIAPATMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQA-GVDGKVSAK 417 N ++ A +V++ I + P+AG G+L R G G V AK Sbjct: 395 MGNQVSAAQFAEVVRAITTGTDARLRAALDGFPVAGLTGTLDSRYGDESTVQGAGLVRAK 454 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 TG+L V L+G++ A G+ + F +G A Sbjct: 455 TGTLNTVLALSGYVVDADGRLLVFSFIGNGLTPGAA 490 >UniRef50_A6EDL0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDL0_9SPHI Length = 448 Score = 215 bits (549), Expect = 2e-54, Method: Composition-based stats. Identities = 87/468 (18%), Positives = 152/468 (32%), Gaps = 57/468 (12%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPAS 62 L+ C A A+ + + + P + + +++ +PAS Sbjct: 24 FCAQLLSGCSADRRLASTLKKTFKRSPVLRQYQAGFALYDPENDRMIFEKDAEKYFIPAS 83 Query: 63 TQKVITALAALIQLG---PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR-- 117 K+ T A L L P R+ V L+ DP+ + ++ Sbjct: 84 NTKLFTFYAGLKILPERVPALRYV------------VRNDSLIFWGTGDPSFLQSRLKGK 131 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 LK+S + + + GW W+D + A + N S+S Sbjct: 132 KAFDFLKQSQL-----QLFYAPGRYTGQVYGKGWAWDDYNDYYQAEINDFPIQDNLVSLS 186 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 S+ F R + R + + A + VP + +P Sbjct: 187 EKSSLLQVSPGFFRDCLFKDADTAGPFRVVRDFNTNAFHYHDRPVPQGYHE-----QVPY 241 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 + + D L + G L + ++ + P Sbjct: 242 KLSLATTLSLLAD-----------TLGR------GVSLLELKMPADAQTIEDV---PRDS 281 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 LL+ M+ SDN IA+ + + N G + IL+ DGS Sbjct: 282 LLREMMLPSDNFIAEQLILLYA----NQTGIEMNTDTTINYILKTYLSDLPDRPSWVDGS 337 Query: 358 GLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 GLSR NL P + +L I + +N +MLP G G+L+ + V Sbjct: 338 GLSRMNLFTPRDITFLLNKIYKTVNNPERLYAMLPAGGKTGTLKNAYPATEKPF---VFG 394 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 KTGS +N +G++ T G+ F + Y + A R + ++ Sbjct: 395 KTGSFSNNHNQSGYVLTKKGKTYLFSFMNNSYTLPTAAVRQEMVRIIT 442 >UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XA90_NAKMY Length = 466 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 100/437 (22%), Positives = 164/437 (37%), Gaps = 88/437 (20%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 PA A + ++ + + +S LPAST K++T A L + P +F T + Sbjct: 86 PALAQFSGVIIDPESGTVLWNQNSTAPQLPASTAKLLTGTALLTSVDPTSKFVTKV---- 141 Query: 91 NVENGVLKGDLVARFGADPTLKRQD------------IRNMVATLKKSGVNQIDGNVLID 138 G +GD+V G D TL + + ++ A ++ SGV +++D Sbjct: 142 --VKGDQEGDIVLVGGGDVTLSARADGVDTVYKGAPLMSDLAAQVRASGVEV--KRIVLD 197 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 T + D A GW + GD+ + + Sbjct: 198 TDYWTGPDLADGW-------------------------------QTGDIRGTPTVAQGYI 226 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 T S + P + N TG D A+ AG Sbjct: 227 TRMSPLMVDGDRED----------PANENSIR-TG----------------DPATTAGKA 259 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 L + Q +T E V+ S P+ LL L+ SDN++A+ + R + Sbjct: 260 LARMIGQPDVTI-----VDGTAPEDAQVLGQVSSQPMSVLLAQALENSDNVLAEALARQV 314 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 AR P ++ S A+ + L + +D + DGSGLS + + P+ M QV+ Sbjct: 315 AIAR-GAPPSFDGASAAMLEAL-EDLKIDTIGIEMYDGSGLSTKDQVPPSVMGQVVALAV 372 Query: 379 QH--DNELNFISMLPLAGYDGSLQYRAGLHQAGV-DGKVSAKTGSLQGVYNLAGFITTAS 435 + N ++ +P+AG GSL R + G V AKTGS+Q Y LAG++ Sbjct: 373 KGDPPALRNLLTGMPVAGVSGSLADRYQDDASRAGAGWVRAKTGSVQLTYALAGYVPDVD 432 Query: 436 GQRMAFVQYLSGYAVEP 452 + + F +G + Sbjct: 433 NRILVFAFVSNGVSSGT 449 >UniRef50_D0LZE4 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZE4_HALO1 Length = 627 Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats. Identities = 80/365 (21%), Positives = 139/365 (38%), Gaps = 21/365 (5%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGV 96 A+ + AP ++ PAS K+I+ AL LGP++R+ T L G Sbjct: 101 AIYIVDAKTGAPLFAAQEDELLNPASNVKLISTATALDALGPNWRYATRLIGPAPDGEGA 160 Query: 97 LKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM 156 + GD+ DPTL+ DI + A L ++GV +IDG++++ + + Sbjct: 161 IAGDVYLLGSYDPTLRASDIWELAAGLGEAGVARIDGDIVVGSDALRDSLGRIRATFRIR 220 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 + P V + + ++ TL Sbjct: 221 GERAGEAP----------EVRIDPGLDFLTDEVREQFLAETFELDNRAETLRARKRARMQ 270 Query: 217 CELDVVPGDLN-RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL- 274 + + L R ++G + +R + Y G IL+ L QAG+ SG + Sbjct: 271 VRVRMDEDALPYRVEVSGHVSKR-RRDKKRRRIPSPQLYTGQILRAALLQAGVEVSGAVR 329 Query: 275 --------LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 + +A +S P+ L+ + K+S N +AD V G A + P Sbjct: 330 VSELGVYTAQHAAAGSVPVELARHESKPISALVARINKRSLNALADRVLMTAGAALYGGP 389 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 T G A+ LR AG+D ++ GSGLS ++ ++ VL+ A + + Sbjct: 390 PTMENGVRAMHAWLRDHAGIDPAEVVLDTGSGLSYRTELSARHIVGVLRTAAGYRASEHP 449 Query: 387 ISMLP 391 ++ P Sbjct: 450 LAPQP 454 Score = 68.4 bits (166), Expect = 5e-10, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 5/75 (6%) Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 + A E F+ L + G DG+L+ R V G+V KTG+L V L+G + Sbjct: 530 EAAAGSSLEQVFLHSLAVGGIDGTLRGRLR----PVRGQVHGKTGTLTRVIALSGIVEHG 585 Query: 435 SGQRMAFVQYLSGYA 449 Q +AF +G+ Sbjct: 586 D-QAVAFSLVTNGHT 599 >UniRef50_Q0FY12 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Aurantimonadaceae RepID=Q0FY12_9RHIZ Length = 396 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 97/417 (23%), Positives = 153/417 (36%), Gaps = 71/417 (17%) Query: 38 LMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVL 97 ++V + ++ + +PAS K++TA A+ LG D+RF T + Sbjct: 35 VLVLD-EDGEDLVAQNTDEAFVPASVAKLVTAWLAMEVLGGDYRFKTKFYMDEDRV---- 89 Query: 98 KGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT 157 L R G DP L ++ + L S + V++D S F + PG D Sbjct: 90 ---LYVRGGGDPFLVSEEFALLAPKLVDSVGEEPLKRVVLDASYFPDDLQIPGIEATDE- 145 Query: 158 QCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYC 217 + A AA + N A + G P+T + + L G Sbjct: 146 -AYDARNAAFAANFNTIH-----AERRGSTVR-SAEEQTPITPLAIEQFLAHG------- 191 Query: 218 ELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA---SYAGAILKDELKQAGITWSGTL 274 P R +L A +D YAG +L +++AG G L Sbjct: 192 -----PAGRGRISL---------------AQEDPKVGLLYAGELLIAFIERAGGDVEGEL 231 Query: 275 LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD 334 + +E V +QS PL +++ ML S+N IA+ +F +G R P + D Sbjct: 232 TTGSVPDELKPVYVHEQSRPLSEIVGQMLLGSNNYIANQLFLEVGAHRRGSPVSLEKSLD 291 Query: 335 AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG 394 ++ L + +D + +GSG+SR N + +L H L Sbjct: 292 VAQEELAELELID--AIQLVEGSGISRDNRFTARGLAVLLDDFRPHAELLR--------- 340 Query: 395 YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 RAG KTG+ GV LAGF T++ FV L+G + Sbjct: 341 -----STRAGS---------RYKTGTFSGVRTLAGFARTSNHGDALFVISLTGNTGK 383 >UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NF89_CORDI Length = 426 Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats. Identities = 101/444 (22%), Positives = 162/444 (36%), Gaps = 98/444 (22%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 + Q P A A + ++ + + PAS K++TA AAL +LGP+ R TT Sbjct: 78 ALAQDPRLAGFAGKIVDATTGEVILEKDADKPLTPASATKMLTATAALYELGPEHRITTE 137 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 + + + +V + D L + + + +K+ + VL+DTS ++ Sbjct: 138 VIKQDDH-------TVVIKAAGDVWLTDERLDQLARKIKEQMPSV--NTVLVDTSAWSGD 188 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 G W+ P D+ VA P+ ++ Sbjct: 189 KILGG--WD-----------------------------PDDVNAGYVAPLEPIMLY---- 213 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 G L + +P + + A L L Sbjct: 214 --------------------------GGRLGAKEGDVPRS---HNPGLDVAAALAQRL-- 242 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 G + + G VVA+ +S L + M++ SDN++A+ + R I + Sbjct: 243 ------GAGTKGYTDSATGEVVATTESEALEKRISQMMQHSDNVMAEAIGREIDATQP-- 294 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 A +IL + G+ IG + +AD SGLS HN I PA + QV + Sbjct: 295 -------VQATLRILSEH-GITIGASEVADNSGLSLHNRITPALLTQVATKAVTDPEVHS 346 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL 445 I LP+AG G+L R G V AKTG+L GV L G + + SG +F Sbjct: 347 LILALPVAGGSGTLADRYAELDG--RGWVRAKTGTLTGVSALVGVVPSTSGHIYSFGLIS 404 Query: 446 SGYAVEPADQRNRRIPLVRFESRL 469 +G ++ R L S L Sbjct: 405 NG-----SEILEARAALDTIASAL 423 >UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGG4_KOCRD Length = 522 Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats. Identities = 100/443 (22%), Positives = 162/443 (36%), Gaps = 72/443 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A + V ++GA P + +PAS QK+++ALA +G R TT+ + G Sbjct: 134 APGVVTAAVGELGADGPVAGREQARPVVPASNQKLLSALAVAEHVGAQDRLVTTVVSGGP 193 Query: 92 VE-NGVLKGDLVAR-FGADPTLKRQDI------RNMVATLKKSGVNQIDG--NVLIDTSI 141 V GD + DP R L++ + + G V +DTS+ Sbjct: 194 GALTLVAGGDTMLAPGQGDPAAVNGHAGLGTLARRTARALEQRSPDGVPGAVEVTVDTSL 253 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 FA D P W D +A ++ P+ ++ Sbjct: 254 FAGPDLNPAWEKED-------------------------------VASGEISRVAPIALY 282 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 S G+ PGD R D A A A Sbjct: 283 SHRVPAADGTD----------PGDRGR------------------RPADPAGEALAEFSR 314 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 +L++ + T + E T +A +SAP+H+ ML SDN +A+T+ R + A Sbjct: 315 QLQKELGDAAVTARGTARAPEGATELARVESAPVHEQSAYMLAHSDNSLAETLTR-VAAA 373 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 R + D + LR+ G+D + D SG++ N + AT+ + + + Sbjct: 374 RSGREASVAGVQDLLPAALREH-GIDTSGLRVLDASGMAPGNRVTAATLARAVDTLLTEP 432 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQA-GVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LP+AG G+L R G AKTG+L V L+G++ G + Sbjct: 433 RFGPYGRGLPVAGGTGTLAERFDDPAEQPARGVARAKTGTLLDVVALSGYVQREDGAVLV 492 Query: 441 FVQYLSGYAVEPADQRNRRIPLV 463 + L+G A ++R V Sbjct: 493 YAVVLNGVTGHTARAKDRVDRTV 515 >UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WUR8_RENSM Length = 475 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 99/466 (21%), Positives = 164/466 (35%), Gaps = 87/466 (18%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 + G A V AA + + + N V + A D S+ ++PAS Sbjct: 59 LAGSLKPDAAKVDAAKLGPLLDSILVSDQGNFTAQVLDAASGAVLFDRKSEAPSIPASNL 118 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD-------IR 117 K++TA A L LG D R T + G G +V R G D L + Sbjct: 119 KLLTAAAVLKNLGADSRLETKVF------RGTEPGTIVLRAGGDSLLAAGESVAGAVNGH 172 Query: 118 NMVATLKKSGVNQIDG-------NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 +ATL + V + G V+ID SIF P W Sbjct: 173 AGLATLAQRVVAALAGSAGPAPLRVIIDDSIFTGPALNPAWD------------------ 214 Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 PGD+A +A +P+ + S + + + + Sbjct: 215 -------------PGDVAVGEIAPIFPLAVNSARADVKSVAGRPKDSAFASAQAFAAALS 261 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 G L +V + T + V+AS Sbjct: 262 QAG----------LPASVD-------------------SVRAAGADLTLNDTTKNVLASV 292 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 QSA + + + ML+ SDN +A+ + RM ++ + + AV + + G+ Sbjct: 293 QSATIAEQVGYMLQNSDNFVAEVLARMSAISQQKSGSSDDS--IAVTESTVKGLGLATEG 350 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE--LNFISMLPLAGYDGSLQYRAGLHQA 408 I D GL+ + ++ A + QV++ + Q + + LP+AG G+L+ R G Sbjct: 351 LKIFDNCGLAPADRVSAALLGQVMRLMTQGPDANVRRAVDGLPIAGLSGTLENRYGTAAT 410 Query: 409 -GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G + AKTG+L V L G++ G+ + F + + A Sbjct: 411 SNAAGLIRAKTGTLNTVMTLTGYVVDLDGRLLIFSLMANDFNAGSA 456 >UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Corynebacterineae RepID=A3Q701_MYCSJ Length = 462 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 109/433 (25%), Positives = 163/433 (37%), Gaps = 91/433 (21%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P LA V P D H+ PAST KV+TA AAL+ L + R TTT+ Sbjct: 82 PNLGELAGRVTDAMTGDPLWDRHADVPMQPASTNKVLTAAAALLTLDREARLTTTVVAGD 141 Query: 91 NVENGVLKGDLVARFGADPTLKRQ------------DIRNMVATLKKSGVNQIDGNVLID 138 + G +V + G DPTL I + +++SG+ V +D Sbjct: 142 QKRD---PGLVVLKGGGDPTLSAAPRGTDSWYRDAARIGELADQVRRSGIE--PTAVAVD 196 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 TS ++ P A D P D+ +A PV Sbjct: 197 TS------------------AYTGPEMAFGWD-------------PLDIPGGDIAPMVPV 225 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 L G + E P A+ AG Sbjct: 226 M-------LDGGRTQPVSEESRRSPT--------------------------PAADAGRA 252 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 L L+ + G +A+ QS PL + L++M+ SDN++A+ + R + Sbjct: 253 LATALR----IDPAAVTVLRGPYRGGRQIAAVQSPPLMERLRVMMNLSDNVMAEAIGREV 308 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 A+ P ++ + AV LR +AG+D + D SGLS + + T+ V+ A Sbjct: 309 A-AQLGRPQSFDDAAKAVLAQLR-KAGIDTTGARLFDSSGLSVDDRLTARTLDDVITAAA 366 Query: 379 --QHDNELNFISMLPLAGYDGSLQYRAGLHQAG--VDGKVSAKTGSLQGVYNLAGFITTA 434 H + +LP+AG G+L R AG G + AKTGSL G +LAG +T A Sbjct: 367 GDDHPELRPLVDLLPIAGGSGTLSNRYLDTAAGREAAGWLRAKTGSLTGTNSLAGIVTDA 426 Query: 435 SGQRMAFVQYLSG 447 G+ + F + Sbjct: 427 RGRVLTFALMSNN 439 >UniRef50_UPI0001B57B89 hypothetical protein StAA4_36716 n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57B89 Length = 918 Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats. Identities = 94/425 (22%), Positives = 157/425 (36%), Gaps = 77/425 (18%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A + L+ V + D+ S PAST K++T AAL+ + P R +T Sbjct: 539 ALSQLSGSVIDPASGTVLWDHASNTPLTPASTTKILTVSAALLAMEPTKRIST------K 592 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + G G ++ G DP+L V D+ ++ Sbjct: 593 IVQGAQPGTVIIVGGGDPSLTAL-------------------PVGTDSPLY--------- 624 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 P AA VD V GD+ +++ + + P + Sbjct: 625 ------------PGAAHVDDLVNQVK----KAGGDVKKVQLDASAFSGPNTAPGWEPSDA 668 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 + D R + + + + ++ D+L Sbjct: 669 PSLYGAPIVPAMTDGGR---------GNPKVDETMRSGNPGTALTQLVADKL-------G 712 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 + + E V+ QSAPL DL +L+ SDN++AD++ R + A ++ Sbjct: 713 ASPAGPAKAPEGAKVLGEVQSAPLPDLAYALLQISDNVLADSLGRQVAMATGG-EASFAG 771 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA-------QHDNEL 384 S AV+++L G D+ + D SGLS N + + QVL A Sbjct: 772 ASAAVKKVLADH-GFDVNGLQLFDTSGLSNQNKVPARLLAQVLAAAAGPDGKDPNTPKLR 830 Query: 385 NFISMLPLAGY-DGSLQYRAGLHQA-GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 ++ LP+AG +G+L R + G G V AKTG+L GV LAG++ + + +AF Sbjct: 831 PLLAGLPVAGSPEGTLHGRYHSGETQGGKGWVRAKTGTLTGVNTLAGYVLDSDNRVLAFA 890 Query: 443 QYLSG 447 +G Sbjct: 891 FMSNG 895 >UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FDCA Length = 485 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 96/446 (21%), Positives = 166/446 (37%), Gaps = 99/446 (22%) Query: 22 NVDEYITQLPAGANL---ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 + + + ++ + A + + ++ + + + PAS KV+T AAL+ +G Sbjct: 85 AIPDEVDKVLSDAKVKGFGIEIRDGLSDDILYAKNENKPRTPASVTKVLTGSAALLTIGG 144 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD-----------IRNMVAT----L 123 + R +TT + L+G G D L + + + L Sbjct: 145 EKRLSTTTQFDPATSTVTLQG------GGDSLLGAGESQPGAVNGHAGLATLAQQTAESL 198 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 K V ++ + +DTS ++ D + Sbjct: 199 KSQNVAEVA--LDLDTSRYSGKD-------------------------------FSPGWE 225 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 D+A + P+ + TG + S+ Sbjct: 226 RVDIAKGVITPIQPLMID------------------------------TGYV--GSKDKE 253 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG-----TVVASKQSAPLHDL 298 + A A A+ ELK AGIT S + G T +A +SA + ++ Sbjct: 254 WRGRSEHPAKDAFAVFTKELKAAGITVSKDPQPADATDATGDEAKPTELAEVESATISEI 313 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 ++ L SDN++A+ + + A+ PG+ AG AV L VD+G T + D SG Sbjct: 314 VEYALVHSDNVVAEVLGNEVAIAQ-GEPGSLEAGPQAVLDALSDT--VDLGQTHLEDTSG 370 Query: 359 LSRHNLIAPATMMQVLQY-IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 LS N I+P + +LQ + D+ + I+ +P+ G G+L R G V AK Sbjct: 371 LSYDNQISPHDLTTILQASVVADDSLSDLIAAMPVGGLTGTLTDRFT-KDRNAAGAVHAK 429 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQ 443 TG+L V +LAG + A G+ + F Sbjct: 430 TGTLSTVTSLAGGVLDADGRYLVFTL 455 >UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S792_9ACTO Length = 487 Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats. Identities = 103/433 (23%), Positives = 162/433 (37%), Gaps = 70/433 (16%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 +V A + + G + V V A +D S + PAST K++TA+AAL L Sbjct: 98 AVLADELAPLLASPALGPGVEARVVDVAAGEVLLDQDSDVPSTPASTAKLLTAVAALTTL 157 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 GPD TT+ G G++V G DPTL + Sbjct: 158 GPDTTLETTVVA------GSAPGEVVLVGGGDPTLS----------------RTVPSLTY 195 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 P A V V S P + + + + Sbjct: 196 ---------------------------PGAPTVADLAAQVR-GSLPAGTRVTRVVIDNSL 227 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 + P + + D R +G LP+ + AG Sbjct: 228 FQGPLTASGWGPGDAPSTYAAPVTATAVDGARVR-SGDLPRSGA----------PGTDAG 276 Query: 257 AILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 L L + + + S +SAP+ L++ L +SDN++ +++ R Sbjct: 277 TALAVALG-----VPDATVVLGNAPQGAQTLGSVRSAPVARLVEQALSQSDNLLTESLAR 331 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 + AR ++P T+ ++AV L AG+D+ ++DGSGLS + + + ++ Sbjct: 332 HVALAR-DLPATFEGAAEAVTGALTD-AGLDVTGVSLSDGSGLSTTDRVPVELLTELFTG 389 Query: 377 IAQH--DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 A +S LP+AGYDG+L R A G V AKTG+L GV+ LAG + TA Sbjct: 390 AADGTLPGTSAVLSGLPVAGYDGTLFDRGDADPATAPGSVRAKTGTLLGVHGLAGTVVTA 449 Query: 435 SGQRMAFVQYLSG 447 G+ + F G Sbjct: 450 EGRLLVFGVVADG 462 >UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Micrococcineae RepID=C7R121_JONDD Length = 476 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 101/449 (22%), Positives = 157/449 (34%), Gaps = 88/449 (19%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G ++A++V P ++ + AS QK++T LAA+ L P+ R +TT+ GN Sbjct: 93 GPSVAVVVSDTFTGDPITAVNADTPIVAASVQKILTGLAAMDVLDPNSRISTTVVQAGNN 152 Query: 93 ENGVLKGDLVARFGADPTLKRQD---------------IRNMVATLKKSGVNQIDGNVLI 137 L G D L + A+LK +G I+ + + Sbjct: 153 -------TLYLVGGGDMMLAANTGDPDAVNGHAGMRNLAEDTAASLKLTGRTTIN--LYL 203 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP 197 D S+F P W + ++A A V D+ R +Y P Sbjct: 204 DDSLFTGSPTGP-WADDIPPLGYAAAVHAIGV----------------DVGRQREGTYAP 246 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 L + + V R V D YA Sbjct: 247 RYADPATHALTTFADHLTELGITVTNTPSRR-------------------VLDRDGYAAT 287 Query: 258 ILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 I + V+AS QSA + +++ LK SDN I + + R+ Sbjct: 288 I-----------------------DDERVIASVQSATVGEIVDYFLKTSDNTITEVMGRL 324 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 + R +PGT+ + AV Q L G+D + D SGL + + + + + + + Sbjct: 325 VAVER-GLPGTFDGATTAVIQAL-TTMGLDTTGVDLVDCSGLGDTSTVTASLINEAINTM 382 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 AQ + + +A YDG+L R G V AKTGSL GV LAG + T + Sbjct: 383 AQAPAYRQAVRGMAVAAYDGTLNDRYTNRNG--RGLVRAKTGSLPGVTALAGTLLTLDDR 440 Query: 438 RMAFVQYLSGYA-VEPADQRNRRIPLVRF 465 + F P R V Sbjct: 441 TLTFTIIADDLPDGGPWAARQAMDAFVEQ 469 >UniRef50_A1B1N0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B1N0_PARDP Length = 484 Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats. Identities = 80/422 (18%), Positives = 145/422 (34%), Gaps = 36/422 (8%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 V + + + PAST K +TAL AL +LG RF T + GN Sbjct: 55 VIDPASGQVLAERQPEPSMAPASTLKAVTALYALDRLGERHRFATRVIRAGN-------- 106 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGV---NQIDGNVLIDTSIFASHDKAPGWPWNDM 156 L+ G DP L + + A + P D Sbjct: 107 TLILAGGGDPVLDTDALDELAAAAVADEQAAGRPAPTAFAVWGGAL--PRIGRLDPAQDE 164 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 ++ + I++ N + + GD + + + T + + Sbjct: 165 HLPYNPSISGMILNFNRVHLDW----RRGDKGYQLSLQARGRKLSPRAYTTAIAAVDRGL 220 Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR 276 G L +T+ +S V+ YAG + + + G+ + Sbjct: 221 PLFTYEAGKLESWTIARSSLGKSGSR--WLPVRRPELYAGDVFQTLCRARGLALPNPEVI 278 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 + + G +A +S L +++ M++ S N+ A+ + A G A + A+ Sbjct: 279 E--ILPEGAEIARHESPDLRRIVRDMMEYSTNLTAEVIGLAASRA-----GDVGASAAAM 331 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 LR Q G+ G+ D SGLS N + + ++ + + + ++PL Sbjct: 332 ADWLRGQ-GIG-GDFAFHDHSGLSPLNRVNAGMLAALVAGPGRTRDLRGLMKLIPLRDAR 389 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G + D ++ AKTG+L V NLAG+ G+ + F + A + Sbjct: 390 G--------KRKDSDIRIEAKTGTLNFVSNLAGYAQAPDGRELGFAILTADEDRRAASEG 441 Query: 457 NR 458 Sbjct: 442 QE 443 >UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B57936 Length = 370 Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats. Identities = 98/422 (23%), Positives = 156/422 (36%), Gaps = 63/422 (14%) Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------ 115 S K+ TA+AAL LGPD R T +E G+ LV G DPTL + Sbjct: 1 SVTKIATAVAALDALGPDHRIRTRVEKDGHR--------LVLVGGGDPTLTARAHPGEYA 52 Query: 116 -IRNMVATLKKS-GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +R + ++ G ++ DTS +A + P + N Sbjct: 53 SLRTLARRTAEALGTEHGTYTLVYDTSRYAGTTRHP-----------------IGPNENL 95 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 V+ P D + + + P T P ++ +L G R + Sbjct: 96 APVT----PLIADEGRLDSSDHGPAARG----TDPALDTARRFHDLLAEAGVKLRDEVE- 146 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 + P A + + +AS SA Sbjct: 147 TGDGKKAPAEDPSGSPKPGDDAKGG------------QDAKGGKGGKDGKDGGIASVSSA 194 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL +++ ML SDN IA+ + R A ++ G+ AV L + G+ + +T Sbjct: 195 PLATIVERMLTYSDNDIAEHLARQTALAT-GATADFKGGARAVHDRL-DKLGLPVEDTSF 252 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGL-HQAGV 410 DGSGL R + + P + +L A+ ++ LP+AG+ G+L R H Sbjct: 253 HDGSGLDRADKLTPRLLTALLAEAARKDQPGLRPVLTGLPVAGFTGTLATRYTAEHNKAG 312 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 G V AKTG+L GV LAG + T SG+ + F + + D + L + + L Sbjct: 313 TGLVRAKTGTLTGVNTLAGTVVTRSGRLLGFAFM----SHDAPDPMAAQAALDKMATALA 368 Query: 471 KD 472 + Sbjct: 369 ES 370 >UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces RepID=Q9Z541_STRCO Length = 451 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 84/240 (35%), Positives = 117/240 (48%), Gaps = 12/240 (5%) Query: 232 TGCLPQRSEPLPLAF----AVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 G P P+ AVQD + AG + +L GIT +G + RQT V Sbjct: 206 EGYYPTEVAPVRSLVVDGAAVQDTSIDAGKVFAKKLAAQGITVTGEVGRQTAKQSD-VPV 264 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A +SAPL D++K MLK SDN IA+T+ RM PGT+ AG+ VRQ+L G+ Sbjct: 265 AQHKSAPLSDIVKKMLKTSDNNIAETLLRMTAVE-LGKPGTFEAGTALVRQVLSS-YGIS 322 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDG-SL---QYRA 403 + N + DGSGLSR + I AT+ Q+L I + + + LP++G G SL R Sbjct: 323 LDNFEMHDGSGLSRADRIPAATLAQLLDAITESPALGSILEGLPVSGEAGASLGPEWGRF 382 Query: 404 GLHQAG-VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 + GKV AKTG+L G L+G T G F + +P+D ++ L Sbjct: 383 DDPNSECAVGKVHAKTGTLTGAIALSGVTRTDDGDWRIFSFIENNSTADPSDIKDAMDGL 442 Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats. Identities = 59/303 (19%), Positives = 104/303 (34%), Gaps = 40/303 (13%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 N+DE + G +++ +V + D++ +PAS K+ TA AL LG + Sbjct: 79 VKNLDERLADERLGTDVSGVVLDADSDTALWDHNGSTALMPASNAKLATATTALTLLGAN 138 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT----LKKSGVNQIDGNV 135 FTT + +G L G D TL +D+ + T L+ +G + D V Sbjct: 139 HEFTTKVVYG--------EGTLTLVGGGDRTLTGEDVAELARTAADGLRAAG--RTDVQV 188 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS------LYSAPKPGDMAF 189 +D S+FA A GW AP + +VD + +++ Sbjct: 189 RVDDSLFADPSLAEGWNEGYYPTEV-APVRSLVVDGAAVQDTSIDAGKVFAKKLAAQGIT 247 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + S V SA ++ N + A + Sbjct: 248 VTGEVGRQTAKQSDVPVAQHKSAPLSDIVKKMLKTSDNNI-------AETLLRMTAVELG 300 Query: 250 DGASYAG--AILKDELKQAGITW------SGTLLRQTQVNEPGTVV----ASKQSAPLHD 297 ++ A+++ L GI+ G+ L + T+ A +S L Sbjct: 301 KPGTFEAGTALVRQVLSSYGISLDNFEMHDGSGLSRADRIPAATLAQLLDAITESPALGS 360 Query: 298 LLK 300 +L+ Sbjct: 361 ILE 363 >UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4G7_GORB4 Length = 465 Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats. Identities = 96/439 (21%), Positives = 151/439 (34%), Gaps = 75/439 (17%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 + PA L + ++ +PAS KV+TA AAL+ L D R TT++ Sbjct: 89 RDPALGALTGQISDAITGQVLWSRNAGTPRIPASNDKVLTAAAALLALPHDQRLTTSVVA 148 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 G ++ + DPTL Q + + + + Sbjct: 149 G-------TNGQIILKGAGDPTLSAQPVGA--------------------DTFYTDPGRI 181 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSV-SLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 P + +D + F ++ S D+A +A + S + Sbjct: 182 ADLATQIRRS--GVPVRSVAIDLSAFEGPTMDSTWDRRDIAGGDIAP-----IESLMVDG 234 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 R +Y AG L L Sbjct: 235 ARVEPLDEYSPRT----------------------------PTPGLAAGRALAKALD--- 263 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 G + + G V+AS QSAPL + ML+ SDN++A+T+ + + P Sbjct: 264 --VDGDVA-EATAPVNGQVIASVQSAPLVTRVNDMLRYSDNVLAETLSVELAVHQGLSP- 319 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA--QHDNELN 385 T +G AVR L+Q T + D SGLS N + + V+ + Sbjct: 320 TLESGVSAVRNTLQQTFAQQWEGTSLHDASGLSYANRVPAELLDVVMTAASGPAQPKMRP 379 Query: 386 FISMLPLA-GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + LP+A G G+L R G V AKTG+L GV +L G + T G+ ++F Sbjct: 380 MLDGLPVAAGLAGTLSDRFDPRTNPGAGWVRAKTGTLTGVSSLTGIVQTVDGRVLSFAMM 439 Query: 445 LSGYAVEPADQRNRRIPLV 463 G PA R ++ Sbjct: 440 SGG--TSPAAARPALDAVI 456 >UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Corynebacterium matruchotii RepID=C5V8S4_9CORY Length = 420 Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats. Identities = 84/430 (19%), Positives = 158/430 (36%), Gaps = 93/430 (21%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 AN+ + G ++ + V + + Q LPAS+ KV+T AAL++L D Sbjct: 61 ANLAPMLDDARLG-KASIQFRDVTTGNVVLAKNPQLPLLPASSTKVLTVSAALLKLDLDD 119 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS--GVNQIDGNVLID 138 R TT + G+ V + D + + I+++ ++K+ GV Q+ ID Sbjct: 120 RITTRVVQSGSDIA-------VIKAAGDVWMTYETIKDLAEQIRKNLPGVKQVQ----ID 168 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 TS + + W ++T+ F +A P Sbjct: 169 TSAWTAPSFIESWGRENITEGF-------------------------------IAPMEPA 197 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 ++ R +G +P+ + P A + Sbjct: 198 MIYGARLNGAR----------------------SGDVPRSNTP-------------ALDV 222 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 ++ G+T E +A +S L + ++ +++ SDN++A+ V R + Sbjct: 223 AGAVARELGVTAFSKAEGTVPAGEGVKELAKVESPTLRERIEKLMETSDNVMAEAVGREL 282 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 + +IL + + + I D SG+S+ N I + ++ A Sbjct: 283 ---------SGSDPVGETLRILGEHFQI-PADLKIFDNSGMSKANRIPAEFLDSLMFAAA 332 Query: 379 QHDNEL-NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + ++ L ++ LP+A G+L+ R + G V AKTG+L L G I + SG+ Sbjct: 333 KDNSRLSAILATLPVAAGTGTLESRYTTLRG--RGYVRAKTGTLTDTSALVGTILSESGR 390 Query: 438 RMAFVQYLSG 447 F + Sbjct: 391 VYTFAIISND 400 >UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXX7_DEIDV Length = 486 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 166/495 (33%), Gaps = 98/495 (19%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 +A V + +P ++ ++V+ G+ ++ +PAST K+ITA + L + Sbjct: 49 PALSAGVRLALKDVPQDVSVGVLVRDAGSGQVLEALRDRESFIPASTVKLITASSVLAER 108 Query: 77 G-PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----IRNMVATLKKSGVNQI 131 G ++T L + R DPTL ++ +R++ G+ ++ Sbjct: 109 GGAQGYWSTDLTIPAVQVGRSHAKTVTLRGSGDPTLSVRNGSYSLRSLARQAYARGLRKV 168 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 + D ++ + P + SA + Sbjct: 169 GEVRVADGTL---------DVDSWQGVSLGVPMTGLRLADWHDDPPAASAEARSRLGAAL 219 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 +A + + + + Y + +P P Sbjct: 220 IAELRQAGVRVVSDRVRQAARSRPYVPPTRLDDQGRALPPDPQVPVSRRP---------- 269 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 + GI AS +SA + +L L+ SDN+ A Sbjct: 270 -------------EQGI-------------------ASVRSASVAGVLARTLRPSDNLRA 297 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + + + R GT + R +LR + G D+ ++ADGSGLSR N + P + Sbjct: 298 EELLATLAV-RPQGTGTLQDALARERAMLR-RTGADLSGVVLADGSGLSRKNRLTPRALA 355 Query: 372 QVLQYIAQHDNELN-------------------------FISMLPLAG----------YD 396 Q+L+ + F+ LP AG Sbjct: 356 QLLKVMHDLPYPNRAGLRQLQLLPQRGLPERLYRSRQNVFVEALPQAGTGENVPGHDGRG 415 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA-DQ 455 G+L R V AKTG+L GV LAG++T SG+ + FV ++G P Sbjct: 416 GTLALRLQDEGLD----VRAKTGTLPGVSALAGYVTARSGRILVFVVLMNGPESSPILTL 471 Query: 456 RNRRIPLVRFESRLY 470 R+ + LV+ + Y Sbjct: 472 RDAQDRLVQALAAAY 486 >UniRef50_B8DWB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Bifidobacterium RepID=B8DWB9_BIFA0 Length = 481 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 99/465 (21%), Positives = 162/465 (34%), Gaps = 84/465 (18%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A +D + G +++ ++ + D+ + PAST K +T+LAA L Sbjct: 83 AKLIDALRAKNGVGPDVSAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMG 141 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD---------------IRNMVATLK 124 T E G +V + D L D +N LK Sbjct: 142 DTLPTQTFLL-QAEQGT--DTVVIKGNGDMLLGAGDSDPDHVNGRAGLLTLAKNTAHALK 198 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + GV +++ + D S+F + G N+ + P ++ +D Sbjct: 199 QRGVTKVN--LQYDDSLFGADRTPTGIEANNPDSLYYTPVSSMAID-------------- 242 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 G + P S P S Sbjct: 243 GGRQWNGANPRNPDVFES--------------------------------YPALS----- 265 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 Q+ A+ AI ++ L GIT QT V+ T +A +SAPL ++ ML+ Sbjct: 266 ----QNTAADVTAIFRNLLGAQGITIVNAEPTQTTVSADRTPIAEVESAPLAMVMAFMLR 321 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 SDN +A+ R++ + + + AVR LR G+D+ +AD SGL+ + Sbjct: 322 HSDNTLAEEFGRLLALSTKQ-ENSPAGATAAVRNELRT-LGIDLTGLQMADCSGLTPGSR 379 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 + T+ QV + L + G G+ R L G KTGSLQ V Sbjct: 380 LTANTLAQVQARNLDVGGAVAAAEGLSIPGLVGTAANR--LASTQAAGLTRVKTGSLQEV 437 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 ++ G ++ G AF ++ P D R + F + L Sbjct: 438 SSMTGNVSREQGGVAAFAVIVNN----PEDFEATRTAINEFVAGL 478 >UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHL4_CORU7 Length = 458 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 97/465 (20%), Positives = 162/465 (34%), Gaps = 85/465 (18%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 V+ A D + L+ + + + + +PAS+ KV T AAL+ Sbjct: 68 EVKKAAKDRQL------GRLSAEITDLETGEVIYANNEGKHLVPASSTKVYTTAAALLAK 121 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 GP R V+ G G+L+ L + + Sbjct: 122 GPQDR-----LATSVVKGG--PGELI--------LVGEGDITLARK-------------- 152 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 G+ + AP + + D+ A + + I V + Sbjct: 153 ----------PGSGFFTD-------APAISDLADQ---VRRALPAEELKKITKITVDNSM 192 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 LD V D R T RS A Sbjct: 193 REKSTFHKSWDLVEIGMGNVTFLDSVMIDAGRIIPTENYSARSNT---------PARDVA 243 Query: 257 AILKDELK--------QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 L +++ + + S + + SAPL L+ M+ SDN Sbjct: 244 QALAEDMGLGEKLKSKKLKLEVSDDPVGPAHPTAE-EALGQVLSAPLSTRLRDMMLHSDN 302 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 M+A+ V R + ++ ++PGT++ ++ V ++L+ GVD ++ D SG+S N ++ Sbjct: 303 MLAEAVGREVAISQ-DLPGTFKGATEGVLKVLKDN-GVDTEGAVLHDTSGMSEDNRLSAH 360 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRA--GLHQAGVDGKVSAKTGSLQGVYN 426 + L LP+AG +G+L+ R G G V AKTG L GV Sbjct: 361 NLNSAL----GSKKLHALQQDLPVAGAEGALRNRYLAGSGAEDAAGWVRAKTGFLDGVNA 416 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 LAG + T SG+ ++F + PAD + R L R + +Y+ Sbjct: 417 LAGTVVTKSGRPLSFAFLSN----TPADVGDGREALDRLAAAVYR 457 >UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F2A Length = 431 Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats. Identities = 92/430 (21%), Positives = 155/430 (36%), Gaps = 68/430 (15%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 G V + + + +PAS +K+ T AL++ G D T + G Sbjct: 39 GGGVNGAYVLNMTTGSVLASVRADTARIPASVEKLYTTSTALLRYGADGTLDTRVLGSGA 98 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 +E+ + D L+ G+ ++ + + G Sbjct: 99 LEDD-------GTWRGDLYLRG------------------SGDPTFGSARYTQYAFGGGA 133 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D+ + ++ S GD +F P + + Sbjct: 134 TVTDLAAAVA-----------EAGITRVSGRVYGDESFFDSKRGGPASSY---------- 172 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ-DGASYAGAILKDELKQAGITW 270 DV G LTG L R A+Q A +A L L+Q+G+ Sbjct: 173 ------GFDVWIGSP----LTGLLYNRGLAKEDGSALQKQPALFAAQQLTTALRQSGVRV 222 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 +AS S P+ L ++ L SDN++A+ + + +G A F G+ Sbjct: 223 -ARAASSGIAPTGAEQLASIPSLPMSTLARLTLVPSDNLLAEMLLKGVG-ASFGTAGSTA 280 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 AG+ R L + G+ +ADGSGLSR N +P ++Q+L + F S + Sbjct: 281 AGATVARSTL-SRFGISP---RLADGSGLSRANATSPRQVVQLLDGMRDQ---AGFRSGM 333 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 P+AG G+L R AKTG+L V L G+ +++G ++AF + + Sbjct: 334 PVAGRSGTLMKRV--RGTIAQDNCQAKTGTLSNVSALGGYCRSSNGHQIAFAFMFNSVST 391 Query: 451 EPADQRNRRI 460 A R+ Sbjct: 392 YAAKAAEDRL 401 >UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGG1_ACTMD Length = 1016 Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats. Identities = 102/459 (22%), Positives = 165/459 (35%), Gaps = 108/459 (23%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A NL V + +PAST K + A AAL+QL +FTT + Sbjct: 639 ALGNLTGTVIDPASKTVLWHQGETTPLVPASTVKNLVAAAALLQLDHTTQFTTKV----- 693 Query: 92 VENGVLKGDLVARFGADPTLKR------------QDIRNMVATLKKSG-VNQIDGNVLID 138 G G +V G DPTL + +V +K SG + +++ ++ Sbjct: 694 -VQGAEPGTVVLVGGGDPTLSSLPEGRSSVYPGAPTLDELVEQVKASGPITEVEYDI--- 749 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 +SA P L P D+A + + P+ Sbjct: 750 -------------------SRYSAEPG------------LAPGVDPNDVAAGFITNIGPL 778 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 + +G A A Sbjct: 779 MLDGARSDPTKGDTPRTAT---------------------------------PAPDAAKA 805 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 L D L G T G L + V+ +S PL L++ M++ SDN++A+T+ R + Sbjct: 806 LADRL---GATVGGKTL----APQAAKVLGEVKSVPLDQLIENMMQLSDNVLAETLAREV 858 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 AR N ++ + AVR +L + G D+ I +D SG+S N + + +L A Sbjct: 859 AKAR-NAETSYEGATKAVRDVLTEN-GFDLTGVITSDASGMSVQNKVPAKLLGDLLTAAA 916 Query: 379 QHDNE--------LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 + D ++ L +AG +G+L+ R AG G + KTG+L V++LAG Sbjct: 917 RPDAATDPVTTRLRPLLTALAVAGGNGTLKERFAQSPAG-KGWIRGKTGTLTEVHSLAGV 975 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + G+ + F +G D R L ++L Sbjct: 976 VVDTDGRLLVFAFMSNGSG----DALGARAGLDALAAQL 1010 >UniRef50_Q1J234 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Deinococcus RepID=Q1J234_DEIGD Length = 473 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 102/465 (21%), Positives = 160/465 (34%), Gaps = 89/465 (19%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP- 78 +A V +T+LP G + L+V+ + + +PAS K++TA + L+ G Sbjct: 47 SAGVQRALTRLPEGVRVGLLVRDLTTGELLEAREADLPLIPASNMKLVTAASVLLDRGGV 106 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----IRNMVATLKKSGVNQIDGN 134 ++T L L R ADPTL D ++ + + GV ++ G Sbjct: 107 GGWWSTELTLPAAEVGRASVSHLTLRGDADPTLTAVDGPNSLQALARQVHARGVREV-GA 165 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 V +D S A W P A ++ + P A R Sbjct: 166 VWVDESRLD----AATW----RGLALGVPMTA-------VRLAEWHDDPPASAAEARARV 210 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 + + + S R G L D Sbjct: 211 GAALIRELRRAGVRVRSDAVIPAPPFRPYTPPPRRDERGHLLP-----------PDP--- 256 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 + E G VAS +S +L L+ SDN+ A+ + Sbjct: 257 -------------------FIPPEHRPEEG--VASVRSGSPFGVLAATLRPSDNLRAEEL 295 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 + R + GT R +LR + VD+ + DGSGLSR N + ++Q+L Sbjct: 296 LATLAV-RPSGNGTLPGALARERGVLR-RLDVDLTGIRLVDGSGLSRENRLTVRALVQLL 353 Query: 375 QYIAQHDN-----------------ELNFISMLPLAG----------YDGSLQYRAGLHQ 407 + + + LP AG G+L R L Sbjct: 354 KVMYDLPYPTGTPQAELPSRTYRDRRNAYAEALPQAGTGENVPAHDGRGGTLALR--LMG 411 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 +G+D V AKTG+L GV +LAG++T SG +AF ++G P Sbjct: 412 SGLD--VRAKTGTLPGVSSLAGYVTGRSGHPLAFALLMNGPEDSP 454 >UniRef50_B3DR07 D-alanyl-D-alanine carboxypeptidase n=11 Tax=Bifidobacterium RepID=B3DR07_BIFLD Length = 496 Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats. Identities = 101/477 (21%), Positives = 170/477 (35%), Gaps = 89/477 (18%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + +A V+E ++ G + +++++ A ++ S PAST K +TALAA Sbjct: 86 AIDSTAASALVNELLSAQGVGNDTSVIIEDAQ-GTVAAEHESNTPREPASTLKTLTALAA 144 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD---------------IR 117 L T + ++G L + D L D + Sbjct: 145 SSTLNMASTLDTQVFLT-QSDDGT--NTLTLKGNGDMLLSAGDSDANHTNGRAGLNTLAK 201 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN-----DMTQCFSAPPAAAIVDRN 172 VA L + G+ ++ + D ++F G D T F P ++ +D Sbjct: 202 ATVAALAQRGITSVN--LEYDDTLFGDSRIPAGLSEGGAVLSDYTVYF-TPVSSMAID-- 256 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 QY P D Sbjct: 257 ---------------------------------------GGRQYTADTPAPAD------- 270 Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 P S P Q AS + L+ G+ +G + T T +AS S Sbjct: 271 ---PDDSAGYPELS--QHTASDVATKFAELLQSNGVAVTGDVTANT-APSGETPLASVSS 324 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 A L +++ L+ SDN +A+ R+ A+ + G++AV+ L G+D Sbjct: 325 ATLSEIMAYTLRHSDNTLAEEFGRLTALAKSAT-NSPEGGTEAVKSTLND-LGLDTSGLT 382 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 +AD SGLS + + T+ V Q ++ L +AG G+ Q R V G Sbjct: 383 MADCSGLSPGSRLIVRTLAAVQQRNLTTESGAAGAEGLSIAGLVGTAQDRY--TDDAVAG 440 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + KTGSL V ++AG ++ +G ++F ++ P D R + F ++L Sbjct: 441 LLRVKTGSLGTVTSMAGNVSRTNGGALSFAVVVNN----PEDYAAARSAIDSFITKL 493 >UniRef50_Q46L11 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Prochlorococcus marinus RepID=Q46L11_PROMT Length = 411 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 85/445 (19%), Positives = 161/445 (36%), Gaps = 96/445 (21%) Query: 14 IAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 I +++Q +++YI + ++ ++ +D + + +PAS QK++++ +L Sbjct: 46 ICYALQK-KIEDYIDNFNSQISVNIL---NKNGEYIVDINGKIPRIPASNQKILSSAFSL 101 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV-NQID 132 LGP++ T+L+ + G L DP ++ + ++ L + I Sbjct: 102 DNLGPNYILKTSLKEMSS-------GGLYFDASGDPDFNKRHLDELLRGLNSKEINTGIK 154 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 +LI +S + P W ++D + + A Sbjct: 155 LPILISSSN-KNTWWPPSWSYSDRKEEYGA------------------------------ 183 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 P+T +S S +A +D +LN + L + P+ +D + Sbjct: 184 ----PITKYS---IASNASTKALNNPIDNFINELNTSLVRNNLSSKYFIKPVY---KDFS 233 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 + +K S SAPL+ LL ++ +S N A+ Sbjct: 234 VDFASTIK----------------------------SVNSAPLYILLNLVNSESHNYTAE 265 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVR--QILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 VFR W V+ + L Q D + I AD SGLSR N + + Sbjct: 266 VVFRH-------SLNNWSHDFPNVKYTKWLNDQ-NFDSDDFIFADASGLSRENRVTTYGL 317 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 Q L+ + + S + G GSL+ + G++ AK+G L V +++G Sbjct: 318 SQFLRRMQLSRYSDYYFSSFSILGVRGSLKNVKA--PINLKGRILAKSGRLSNVRSISGI 375 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQ 455 I G+ F ++ + Sbjct: 376 IL---GKDKIFSIIVNNKENSTKNI 397 >UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LES6_9BACT Length = 406 Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats. Identities = 69/240 (28%), Positives = 110/240 (45%), Gaps = 10/240 (4%) Query: 219 LDVVPGDLNRFTLTGCLPQRSEPL-PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 LD+ D R C + PL PL + +D A L LK AGI +G+L+ Sbjct: 163 LDLSLKDSARLGWGWCWDDDNPPLTPLLYNQRDN---FTAALSAALKDAGIRLAGSLIEG 219 Query: 278 TQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVR 337 G + + +S + +L M+K+SDN+ A+ +F + + ++ Sbjct: 220 R--ISSGASLWTVRSHTIDQILLRMMKQSDNLYAEALFYQLAAHSGKAYAGRKQAVAYIK 277 Query: 338 QILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYD 396 + L + G+ + ADGSGLS +N +P + L+Y H+ L+ LPLAG D Sbjct: 278 E-LARHQGLAPADFSFADGSGLSLYNYASPRLLTAFLRYAYTHEGIFLHLQPSLPLAGVD 336 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G+L+ R + VSAKTG+L+GV L+G+ T +G + F G + R Sbjct: 337 GTLRKR--MTSGPAYANVSAKTGTLEGVSTLSGYCTAPNGHTLCFAIMNQGILRQSVAHR 394 >UniRef50_C9PY01 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Prevotella RepID=C9PY01_9BACT Length = 428 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 62/196 (31%), Positives = 102/196 (52%), Gaps = 6/196 (3%) Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 EL++AGI Q + T + ++ + +L M+K+SDN+ A+ + Sbjct: 219 FMDRFMQELRKAGIVLDA-FTATGQRPQDATCICTRF-HTMDQILMRMMKESDNLYAEAM 276 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 F I A N P T + + V++ L + G++ +ADGSGLS +N ++ + +L Sbjct: 277 FYQIAAATGNKPATAKNAAQVVKR-LISKLGLNAAAYNVADGSGLSLYNYVSAELEVAML 335 Query: 375 QYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 +Y ++DN L+ LP+AG DG+L+ R + G V AKTGS+ GV++LAG+ T Sbjct: 336 RYAFRNDNIYLHLSPSLPIAGIDGTLKSR--MKGVFTRGNVRAKTGSVTGVFSLAGYCTA 393 Query: 434 ASGQRMAFVQYLSGYA 449 A+G R+ F G Sbjct: 394 ANGHRLCFAIINQGVM 409 Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats. Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Query: 20 AANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGP 78 A +D + + + L LMV + A + ++ Q PAST KVITA+AAL +LG Sbjct: 67 KARIDRLLQADMLRTSQLGLMVYDLDADSAIYRFNEYQTMRPASTMKVITAIAALDKLGG 126 Query: 79 DFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLID 138 +F T L G++EN L G++ G DP D+ V +L+K GV+ I G + D Sbjct: 127 SHQFKTELCYTGSIENRTLTGNVYCVGGFDPRFNADDMHAFVESLQKMGVDTIRGTLYAD 186 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPA 165 S+ + GW W+D SA Sbjct: 187 KSMKTTDILGKGWCWDDDNPVLSALVY 213 >UniRef50_C0BK36 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BK36_9BACT Length = 425 Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats. Identities = 92/476 (19%), Positives = 167/476 (35%), Gaps = 66/476 (13%) Query: 5 RFIIGLTSCIAFS----VQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMA 58 R I L C++ + V + ++ A A++A+ + + + P Y + Sbjct: 4 RLFIFLFVCVSSLWSQRLSEKRVGRQVQKIEAFQKAHVAISISPLEGATPMAQYQAAHYM 63 Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARF--GADPTLKRQDI 116 PAS K++T LG +F + + + D + F P L Sbjct: 64 TPASNTKLLT------FLGASQQFK-----ELPAVSYFKEKDSIIHFKSTGYPLLFHPFY 112 Query: 117 RNMV--ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 ++ + A + G+ + +V D+ GW W+D + ++A + + N Sbjct: 113 KDTILDAFFNQKGLW--NYHVNKDSP----KPHGSGWAWDDYSYYYAAETSVFPIYGNTL 166 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 + + +F F+ L + D N F Sbjct: 167 QAQIDAKELKMSPSF-----------FASKTILDSLGKAFKRAY------DRNTFHFNPA 209 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 + L F D ++ L + I + + + Sbjct: 210 AWSAGDTLYRPFITSD------SLFVKLL-EHEIGQPVHVADGNSAEPQWNFLYTAAEET 262 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L+ L L+ SDN IA+ + MI FN A+ +L Q Sbjct: 263 LYSAL---LQDSDNGIAEALLLMISQKNFNG----MTPEKAIALLLDQWKPWLPDPIAWV 315 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSG+SR+N+I P T+++VLQ I + S P G+L+ + + Sbjct: 316 DGSGISRYNMITPRTVVRVLQKIYETAGWQTIESYFPKGATSGTLKKYSNTA-------L 368 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR-FESRL 469 AKTG+L+ +NL+G+ G+ F ++ + A+ R L+ FE +L Sbjct: 369 YAKTGTLRHNHNLSGYWVHPKGKTYVFSIMVNHHTASTAEVREGIGTLLEWFERKL 424 >UniRef50_C5VM55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Prevotella RepID=C5VM55_9BACT Length = 442 Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats. Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 14/235 (5%) Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR 276 D+ D +R C ++ L DG +L+ G+T +G+ Sbjct: 198 VYADLSFKDRDRLGEGWCWDDKNPNLSPLL--VDGKDEFTYRFSRKLEDMGVTLNGS-TG 254 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 + Q+ ++ ++ + +L M+K SDN+ A+++F + GT AG+ Sbjct: 255 ERQLPTDAQLLTTRT-HSIRQVLHRMMKVSDNLYAESMFYQLAA----NGGTRWAGAKTA 309 Query: 337 RQI---LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPL 392 RQ L + G++ + +ADGSGLS +N ++ ++L+Y Q D ++ P+ Sbjct: 310 RQYENALFSRIGLNPRDYNVADGSGLSLYNYVSTELETKLLRYAYQRSDIYGAYLEAQPI 369 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 AG DG+L+ R + G V AKTG+++GV +LAG++TT++G + F +G Sbjct: 370 AGVDGTLKSR--MRGTAAAGNVRAKTGTVKGVSSLAGYLTTSNGHLLCFSIINNG 422 Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats. Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 7/153 (4%) Query: 21 ANVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A +D + L ++MV + P + + PAST K +TA+A L +LG D Sbjct: 81 ARLDGILRSPLLETVQTSVMVWDLTDDVPVYQFRERLHMRPASTMKCVTAIATLDKLGAD 140 Query: 80 FRFTTTLETKGNVENG--VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 + F T L G +++ VL+GDL G DP L D+ M ++ G+ I+G V Sbjct: 141 YDFKTNLYYTGVIDDSTQVLRGDLYCVGGMDPMLSSSDLTEMARAVRDLGIKTIEGGVYA 200 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 D S GW W+D + + +VD Sbjct: 201 DLSFKDRDRLGEGWCWDDK----NPNLSPLLVD 229 >UniRef50_D1Y0J6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Prevotella bivia JCVIHMP010 RepID=D1Y0J6_9BACT Length = 446 Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats. Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 5/194 (2%) Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 +L+Q GIT + + ++ + S + D++ M+K SDN+ A+++ Sbjct: 237 FIEQFNQKLRQNGITIDSGYGTRQYPSNAQNIITTTHS--IGDVMHHMMKASDNLYAESM 294 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 F + + Q L ++ G++ N IADGSGLS +N + +++L Sbjct: 295 FYQLASNGGINKHASANNARIYIQQLIRKLGLNPSNYKIADGSGLSLYNYLTAELEVKLL 354 Query: 375 QYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 +Y Q+ + + LP+AG DG+L+ R + V AKTG++ GV +LAG++T Sbjct: 355 RYAYQNPDIYNTLLPTLPIAGVDGTLRKR--MRNTPAARNVKAKTGTVVGVTSLAGYLTA 412 Query: 434 ASGQRMAFVQYLSG 447 A+G + F +G Sbjct: 413 ANGHLICFSIINNG 426 Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats. Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 9/182 (4%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 L +M+ + ++ Q PAST K +TA+AAL +LG + + T+L Sbjct: 94 LLQTVQAGVMIWDLTDDTLLFQHNEQLHLRPASTMKCVTAIAALDKLGSSYTYKTSLYYT 153 Query: 90 GNVENG--VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 GN+ + L+GDL G DP + ++ +VA +K G+N I G + D S S Sbjct: 154 GNLVDSTQTLEGDLYIVGGMDPMFRATEMNQLVAAIKNLGINHITGTLYADLSFKDSKQF 213 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV---ASYYPVTMFSQV 204 GW W+D + + ++ + ++ + I YP + + Sbjct: 214 GRGWCWDDK----NPTLTPLLYNKKDIFIEQFNQKLRQNGITIDSGYGTRQYPSNAQNII 269 Query: 205 RT 206 T Sbjct: 270 TT 271 >UniRef50_D2NQQ1 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Rothia mucilaginosa RepID=D2NQQ1_9MICC Length = 563 Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats. Identities = 95/423 (22%), Positives = 154/423 (36%), Gaps = 70/423 (16%) Query: 39 MVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLK 98 ++ A A ++ +PAST KV+T A R T + + Sbjct: 150 SIKATTAPADLYAANADTARVPASTFKVLTLFALNHYANLQARLRTRVTRDAAGLYLMAG 209 Query: 99 GD-LVARFGADPT--LKRQDIRNMVA-TLKK--SGVNQIDGN-VLIDTSIFASHDKAPGW 151 GD L+ +DP + R + + T+K G V +D + F PGW Sbjct: 210 GDTLLGVGASDPKQIVGRAGLTTLAELTVKALLQGEKPTAALPVYLDGTFFTGPGVNPGW 269 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D +A ++ +P+ + S T+P S Sbjct: 270 DDAD-------------------------------VASGQITPIHPIALESH--TVPGKS 296 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 S P+ A L K++G+++ Sbjct: 297 TA-------------------------SNPVRPDDAAVAAQQAFVDALNTAGKESGMSF- 330 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 TL + +A+ +SA L + + M+ +SDN +A+ + R A G+ A Sbjct: 331 -TLAERRTAPAEAVEIAAVESATLLEQAQHMMLESDNALAEVLGRCAAIA-AGKEGSGEA 388 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 VRQ L AGV+I N + AD G+S + + T++QV+ + ++ +S P Sbjct: 389 AQQTVRQALVD-AGVNIENLVQADVCGMSLTDRVTARTLVQVVALLNADEHAEQLMSTFP 447 Query: 392 LAGYDGSLQYRAGLHQAG-VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 +AG G+L R G A V AKTG+L V +L G T G R+ F L+ Sbjct: 448 VAGVSGTLSGRFGAANAVHARTFVQAKTGTLYTVSSLCGVATRPDGTRLIFAIILNDLGG 507 Query: 451 EPA 453 A Sbjct: 508 ADA 510 >UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Corynebacterium RepID=C0WGS1_9CORY Length = 451 Score = 178 bits (452), Expect = 3e-43, Method: Composition-based stats. Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 14/215 (6%) Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 G + +P + A L L V E +AS +S Sbjct: 231 GRIGATEGDVPRS---HTPALDVAGELAKRL-------GTDKFAPGTVTEGAEELASVES 280 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 APL + M++ SDN++A+ + R + AR P +++A + A +LR+ G D+ Sbjct: 281 APLSERALEMVRHSDNVMAEAIARELADARGKQP-SFQADTQATLDVLREH-GFDVSGVD 338 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 I D SGLS N ++ + + +++ + + LP+AG DG+L R G ++ G Sbjct: 339 IKDNSGLSVDNRLSASVLAEIVNGAVEEPQLRPLAAYLPVAGGDGTLHERYG--ESAARG 396 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 V AKTG+L GV LAG SG+ +F ++ Sbjct: 397 FVRAKTGTLTGVSALAGTAQGQSGRVYSFAFLVND 431 Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 9/174 (5%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 F+ +A +DE A V + + + PAS+ KV+T AA + Sbjct: 84 FAALSAKLDELGKNEDL-ATFGGQVIDSETGTVVWERAADKALTPASSTKVLTTAAATLA 142 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 L R TT + G ++V + D + + + ++ +KK+G Q+ G V Sbjct: 143 LDESKRITTKVY------RGKDPNNVVIKAAGDVWMTNEQLDDLANQIKKTG-TQVAG-V 194 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 IDTS +A +APGW ++ + F AP A++ + P+ A Sbjct: 195 YIDTSAWAGEPQAPGWDPENVDEGFVAPMEPAMLYGGRIGATEGDVPRSHTPAL 248 >UniRef50_B9TF38 D-alanyl-D-alanine carboxypeptidase, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9TF38_RICCO Length = 276 Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 109/265 (41%), Gaps = 24/265 (9%) Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 GD L G P+ A V D Y G +L E ++ G + G + + Sbjct: 1 GDRIEVVLHGSFPKDC-TRTTAINVLDSHDYLGRLLLAEWRKLGGSVGGDVREAAPADPA 59 Query: 284 G-------TVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV----------- 325 ++A S L ++++ K+SDN +A T+F +G + Sbjct: 60 TTAAAPATRLLAEHVSRTLPEIVRDTNKQSDNTLARTIFLSLGSLEADPVLGSKPLPPDA 119 Query: 326 --PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 T A+R L+Q +D +I +GSGLSR PA + +LQ + Sbjct: 120 SGASTPMLADTAIRSWLQQHH-IDGNGLVIDNGSGLSRSERATPAQLAGLLQAGLKSLWM 178 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 F++ LP+A DG+++ R L + + KTGSL G+ +AG++ A+ Q V Sbjct: 179 PEFLASLPVAATDGTMRRR--LKDSPAAQRARLKTGSLNGMIAIAGYVPDANNQPCIVVA 236 Query: 444 YLSGYAVEPADQRNRRIPLVRFESR 468 L+ V R LV + +R Sbjct: 237 ILNDPHVANGAGRAVLDELVDWVAR 261 >UniRef50_C2CX37 Possible D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CX37_GARVA Length = 594 Score = 177 bits (449), Expect = 7e-43, Method: Composition-based stats. Identities = 96/482 (19%), Positives = 162/482 (33%), Gaps = 69/482 (14%) Query: 17 SVQAANVDEYITQLPA----GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 V ++ ++ + + G N + ++ + PAST K +TALAA Sbjct: 150 PVDKSSAEKILKEFFEYPGLGPNASAVIADAN-GKIIAAKNENLALQPASTMKTLTALAA 208 Query: 73 LIQLGPDFRFTTTLETK--GNVEN------GVLKG--DLVARFGADPTLK---------- 112 L +TT+ G+ N GV G LV G D + Sbjct: 209 SHVLDMGSTLSTTVYANYVGSSRNADSAVSGVKNGFARLVLHGGGDMLMGAATNDPNHVN 268 Query: 113 -RQDIRNMV----ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 R + + +LKK GV ++ + +D S+F ND F AP ++ Sbjct: 269 GRAGLETLASNTVNSLKKQGVKVVE--LAVDDSLFGEKRYPDLIHENDEEGRFYAPTSSL 326 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 VD D + + ++ D Sbjct: 327 AVDEGRDRNFAAWVAAGNDADDPDDYPLLDRHPAVSTGLIFANLLKKFGIDVRTWSTDSA 386 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 + T + S + R+ ++ + Sbjct: 387 KIGKTSKIDGLSSIYVSS------------------------------RKPMISSDFKQI 416 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A SAPL++++ ML+ SDN IA+ R+ A + +DAVR +LR GVD Sbjct: 417 ARVSSAPLNEIMAYMLRHSDNSIAEEFGRLTALA-MRKSNSPEGATDAVRDVLRD-LGVD 474 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 I ++D SGLS + + T++QV + L L G + R L Sbjct: 475 INGLHMSDCSGLSPKSAVRAVTLVQVQAQNLKIGKGAAAAEGLALPGVWCT-SARHRLSD 533 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 G + KTG L V ++ G ++ SG + F ++ P D + + + + Sbjct: 534 PSAAGLLRVKTGFLGDVSSMVGNVSRKSGGALTFAVVVN----PPGDVNYTYVGINKMMA 589 Query: 468 RL 469 L Sbjct: 590 EL 591 >UniRef50_D2RBZ9 Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBZ9_GARVA Length = 596 Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats. Identities = 85/450 (18%), Positives = 158/450 (35%), Gaps = 45/450 (10%) Query: 45 ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET---KGNVENGVLKGD- 100 + + PAST K +TA A L T + G + + Sbjct: 168 NGRVVASHEPNALREPASTLKTLTASVASRTLDMGSTLDTQVFLLPKTGGIPERASSTNA 227 Query: 101 --LVARFGADPTLK-----------RQDIRNMVA----TLKKSGVNQIDGNVLIDTSIFA 143 LV R D L R + + LK ++ + + +D S+F Sbjct: 228 RKLVLRGNGDMLLGVGENDWHHVNGRAGLTTLARRTANALKLENIHTVS--LAVDDSLFG 285 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDR-NCFSVSLYSAPKPGDMAFIRVASYYPVTMFS 202 + D+ + F A ++ +D +S+ F + +++ Sbjct: 286 AKRAPDLIYETDVERRFYAQTSSLAIDDARQRDLSVQGVDADAMTDFPLSDPHPALSVGH 345 Query: 203 QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 L + D + +G +P ++ A + Sbjct: 346 VFAKLLSKQGIVISNYSNKTASDEKK---SGSGSSADDPSENNKDSENENKSAQS----- 397 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 + I S T Q+ ++ ++A SAPL++++ L+ SDN +A+ R+ A Sbjct: 398 -ENLVIPVSET---QSLISSNSRLIAQVSSAPLNEIMAYTLRISDNTLAEEFGRLTALAT 453 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY-IAQHD 381 + AV++ LR + +DI ++D SGLS + + T+ QV I Sbjct: 454 HKS-NSPEGAVQAVKEGLR-KLNIDIRGLHMSDCSGLSPKSRLRATTLAQVQVLNIKADS 511 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAF 441 L L G G+ + R + G + KTGSL V ++ G ++ +G + F Sbjct: 512 GGAAAAEGLSLPGLVGTARKRLADESSA--GMLRVKTGSLSEVTSMVGNVSRKNGGVLTF 569 Query: 442 VQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 + +PAD + + +F + L K Sbjct: 570 AVVAN----QPADIWGAFVAINKFMAELPK 595 >UniRef50_C2BSG4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Mobiluncus curtisii ATCC 43063 RepID=C2BSG4_9ACTO Length = 555 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 99/474 (20%), Positives = 167/474 (35%), Gaps = 55/474 (11%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPAST 63 + ++ + A V E+ T A A L+ V + Q AST Sbjct: 60 IPLFAKSTNFDANTYKALVREFATDYRLANAKLSFWVGD-RDGVELASHEPQSALTAAST 118 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 K++TA+AAL + GPD R T + + L G D L + ++ Sbjct: 119 TKLLTAVAALHEFGPDARARTVVAWDNDKRK------LFLIGGGDMLLGAG--ADTPRSV 170 Query: 124 KK-SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 K +G++ + + ++ S + P PP++A + S + S Sbjct: 171 KGYAGLDTLAADTIVALSAQTPGNTKPAAG--------GPPPSSA---KKSKSATSNSPA 219 Query: 183 KPGDMAFIRVASYYPVTMFSQVR-TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + + P T+ + ++ + D G + + L +P Sbjct: 220 SRDKSPAGSLLNGKPYTLVLDTSWFGSQTASPSWRDGDDRWVGPIQGMAINTGLV---DP 276 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSG----------------------TLLRQTQ 279 D A AG L + G + + Sbjct: 277 NAYRGYQSDPAGVAGQAFAQALSRLGGAGPAKVEVGKSGLASKELLDPLSPLPKVSTEVS 336 Query: 280 VNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI 339 + +A Q APL + + MLK SDN +A+++ R++ R P T+ AV Sbjct: 337 ASHGPVPIAYAQGAPLAQVERQMLKISDNTLAESLGRLVALHRNAKP-TFAGSGAAVMDS 395 Query: 340 LRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV--LQYIAQHDNELNFISMLPLAGYDG 397 LR+ GVD+G T + SGL+ I + V L H + + +P+AG DG Sbjct: 396 LRE-LGVDLGKTELKGCSGLAYETRIPARVLADVVRLTTSRDHPELHSVTANVPVAGADG 454 Query: 398 SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 +L++ G V KTG+L +LAG Q + +SGY Sbjct: 455 TLEH--TYQGTLAAGVVRGKTGTLAITNSLAGTFV-RDNQEFIYALVISGYPES 505 >UniRef50_C8NYS1 Penicillin-binDing protein, d-ala-d-ala carboxypeptidase (Fragment) n=1 Tax=Corynebacterium genitalium ATCC 33030 RepID=C8NYS1_9CORY Length = 393 Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats. Identities = 93/425 (21%), Positives = 145/425 (34%), Gaps = 102/425 (24%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + QAAN PA L + + + + + PAS K++TA AAL Sbjct: 71 KLAAQAAN--------PALGTLHVRISDGLTGKTVFEQRAGEPLQPASATKLLTAAAALY 122 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 L PD +T + KG+ + + D L D+ + A + + Sbjct: 123 TLEPDATVSTQVLRKGDA--------VTIKAAGDVWLTASDVDELAAKVGSA------SA 168 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 V +D SI WP + P D+ +A Sbjct: 169 VYVDKSI---------WPEE----------------------TFMPGWDPEDIDGGYIAP 197 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 P+ + + EP+ A Sbjct: 198 MEPIMV---------------------------------HGGRLGEPVGDVPRTHTPALD 224 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 + D + G VVA+ +S PL + L+ M+K SDN++A+ + Sbjct: 225 VAQSIAD-------RVGAETVGFGPAPADGEVVATVESPPLTERLRDMMKDSDNVMAEAI 277 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 R I AR A L + G +I +AD SGLSR +LI P + V+ Sbjct: 278 GREIARARGGT------SPQATLDALTEH-GFNINGVTLADSSGLSRFDLIPPRLLDDVM 330 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 + + ++ L +AG DG+L R G G V AKTG+L G L G +T+ Sbjct: 331 VRATSTNELRDLLTTLAVAGGDGTLIDRYGDLSG--RGWVHAKTGTLTGTSALVGTVTSK 388 Query: 435 SGQRM 439 +G Sbjct: 389 AGNVY 393 >UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Actinomycetales RepID=A6W5C7_KINRD Length = 478 Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats. Identities = 103/464 (22%), Positives = 158/464 (34%), Gaps = 76/464 (16%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 + V + GA+++ V + + PAS K++TA+AAL Sbjct: 75 PAALGGVVAPLLADPALGASVSTSVVDALTGETLLATAADVPRTPASVAKLLTAVAALHT 134 Query: 76 LGPDFRFTTTLETKGNVENGVL--KGDLVA-RFGADPTLKRQDIRNMVATLKKSGVNQID 132 LGP R TT++ + VL GD++ DP + Sbjct: 135 LGPTSRATTSVVDGATPDEVVLVAGGDVLLAAGAGDPDAVDGHAGLDDLAAATAAELLAA 194 Query: 133 GN----VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 G V +D + F +PGW D+ F P A VD +AP+ GD A Sbjct: 195 GRTAVAVRLDDASFTGPATSPGWGSGDVAAGFVMPVAPLAVDEGRL-AEGETAPRTGDPA 253 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 ++ V+ L +G + P+ A AV Sbjct: 254 LAAARTFAAALAAHGVQVLDQG----------------------------AGPVVRAAAV 285 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 A+ A +Q + + + +V +A+ + A D Sbjct: 286 PGAATLASVESATTAEQVELMLTASDNTLAEVLTRRVALAADRPATFDD----------- 334 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 A V Q+ GVD+ T + GSGL R + Sbjct: 335 ----------------------ASRAVVDQV--AALGVDVTGTSLQGGSGLGRATRVPAR 370 Query: 369 TMMQVLQYIA--QHDNELNFISMLPLAGYDGSLQYRAGLHQAG-VDGKVSAKTGSLQGVY 425 + VL +A +H + LP+AG G+L R + G V AKTG+L GV Sbjct: 371 VVTDVLTLVAGGEHPELGAAAAGLPVAGVSGTLLERYAEPGSASAAGVVRAKTGTLTGVS 430 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +LAG++ A G+ +AF G A P R RF + L Sbjct: 431 SLAGYVRDADGRLLAFAVMSDGVA--PGASLAARRAQDRFAAAL 472 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 T... 508 e-142 UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax... 491 e-137 UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 434 e-120 UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Ta... 425 e-117 UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Phot... 415 e-114 UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 409 e-112 UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 400 e-110 UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 398 e-109 UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1... 396 e-109 UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibr... 395 e-108 UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grim... 393 e-108 UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 392 e-107 UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 392 e-107 UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B;... 390 e-107 UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 388 e-106 UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 385 e-105 UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 385 e-105 UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 383 e-105 UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B;... 383 e-105 UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 382 e-104 UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio ... 380 e-104 UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 380 e-104 UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 380 e-104 UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 379 e-103 UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 378 e-103 UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 377 e-103 UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 376 e-102 UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 375 e-102 UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 374 e-102 UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax... 372 e-101 UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 372 e-101 UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 372 e-101 UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 372 e-101 UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 371 e-101 UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ocea... 371 e-101 UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibr... 370 e-101 UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptida... 370 e-101 UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 369 e-100 UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 369 e-100 UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 368 e-100 UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 367 e-100 UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 367 e-100 UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 367 e-100 UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, pepti... 367 e-100 UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 367 e-100 UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxal... 366 e-100 UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 366 1e-99 UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 366 1e-99 UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 366 1e-99 UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 363 8e-99 UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 363 1e-98 UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Baci... 362 1e-98 UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 361 3e-98 UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 360 5e-98 UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 360 7e-98 UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candida... 360 8e-98 UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 359 1e-97 UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 359 1e-97 UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. ... 359 2e-97 UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1... 359 2e-97 UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 357 4e-97 UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acti... 355 2e-96 UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 355 2e-96 UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella ... 353 9e-96 UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 352 1e-95 UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 352 1e-95 UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 351 3e-95 UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 351 3e-95 UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillu... 351 3e-95 UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 351 4e-95 UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 349 1e-94 UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 348 3e-94 UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolys... 347 4e-94 UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 famil... 347 6e-94 UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 347 6e-94 UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 345 2e-93 UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 345 2e-93 UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptid... 343 6e-93 UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family ... 343 1e-92 UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 342 1e-92 UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 342 1e-92 UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 342 2e-92 UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 342 2e-92 UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 341 4e-92 UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bact... 341 4e-92 UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenel... 340 7e-92 UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkhol... 340 8e-92 UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 339 2e-91 UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax... 338 2e-91 UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 338 2e-91 UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 336 9e-91 UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type... 336 1e-90 UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 336 1e-90 UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 335 2e-90 UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 335 2e-90 UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 T... 334 4e-90 UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 ... 334 4e-90 UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candida... 334 5e-90 UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 332 2e-89 UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocyst... 332 2e-89 UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 331 2e-89 UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acar... 330 9e-89 UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 329 2e-88 UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acid... 328 3e-88 UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 327 4e-88 UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 327 5e-88 UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 327 6e-88 UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 327 7e-88 UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 326 8e-88 UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) fami... 326 1e-87 UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 326 2e-87 UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5... 325 3e-87 UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 324 4e-87 UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 323 8e-87 UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fuso... 322 2e-86 UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ther... 322 2e-86 UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Ta... 321 3e-86 UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemm... 321 3e-86 UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria ... 321 4e-86 UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 321 4e-86 UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 321 5e-86 UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 319 2e-85 UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 316 9e-85 UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 316 1e-84 UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax... 314 5e-84 UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 313 8e-84 UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 313 1e-83 UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porp... 312 2e-83 UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 311 4e-83 UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-a... 311 4e-83 UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 310 7e-83 UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alca... 309 1e-82 UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepI... 309 2e-82 UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flav... 309 2e-82 UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 307 6e-82 UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 307 6e-82 UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 307 7e-82 UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 305 2e-81 UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/... 302 2e-80 UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisel... 302 2e-80 UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 301 4e-80 UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 297 6e-79 UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 295 2e-78 UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 293 8e-78 UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvula... 293 9e-78 UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 292 2e-77 UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 292 2e-77 UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase ... 291 4e-77 UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 291 4e-77 UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flav... 291 4e-77 UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax... 290 6e-77 UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-... 290 7e-77 UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 285 2e-75 UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 285 2e-75 UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 285 2e-75 UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 285 3e-75 UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 284 6e-75 UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 283 8e-75 UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1... 283 9e-75 UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 281 3e-74 UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine c... 279 1e-73 UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 278 4e-73 UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 277 5e-73 UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 277 8e-73 UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 274 6e-72 UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 272 2e-71 UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 271 3e-71 UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 271 6e-71 UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 270 7e-71 UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase ... 270 1e-70 UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1... 269 2e-70 UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 268 4e-70 UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 267 7e-70 UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 263 9e-69 UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=... 263 2e-68 UniRef50_Q5ZVH0 Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax... 261 4e-68 UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 260 8e-68 UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 260 1e-67 UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 259 1e-67 UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepI... 257 9e-67 UniRef50_D1UR62 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 256 1e-66 UniRef50_B2T8J3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=2... 256 1e-66 UniRef50_A3I000 Hypothetical D-alanyl-D-alanine carboxypeptidase... 256 1e-66 UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 252 3e-65 UniRef50_A4CNT5 Putative uncharacterized protein n=1 Tax=Robigin... 250 8e-65 UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 250 8e-65 UniRef50_C5PW65 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 249 2e-64 UniRef50_C0ZYE1 Putative D-alanyl-D-alanine carboxypeptidase n=1... 248 4e-64 UniRef50_Q47KT6 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 245 3e-63 UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 245 3e-63 UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2... 244 8e-63 UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 242 2e-62 UniRef50_C4LKM4 Putative penicillin-binding protein 4 n=1 Tax=Co... 241 3e-62 UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precurs... 240 8e-62 UniRef50_C7PJX0 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 238 3e-61 UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 237 5e-61 UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 237 7e-61 UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxyp... 235 2e-60 UniRef50_A6EDL0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 235 3e-60 UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Cory... 234 7e-60 UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 233 1e-59 UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thi... 233 1e-59 UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type... 232 2e-59 UniRef50_D2QFU8 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 232 2e-59 UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 231 4e-59 UniRef50_A9BIW7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 229 1e-58 UniRef50_A4F6R6 Putative uncharacterized protein n=1 Tax=Sacchar... 229 2e-58 UniRef50_A4AQH7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 228 3e-58 UniRef50_B4V6I2 Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax... 227 6e-58 UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Co... 225 4e-57 UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alan... 223 1e-56 UniRef50_C0VXH6 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Cory... 222 3e-56 UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 221 3e-56 UniRef50_A7HML0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 221 3e-56 UniRef50_D2S5C3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 221 7e-56 UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 220 9e-56 UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alan... 220 1e-55 UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 217 5e-55 UniRef50_C0BK36 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 216 1e-54 UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Co... 216 2e-54 UniRef50_A1B1N0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 215 3e-54 UniRef50_UPI0001B57B89 hypothetical protein StAA4_36716 n=1 Tax=... 214 8e-54 UniRef50_D1XTI9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 213 1e-53 UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 213 1e-53 UniRef50_D0LZE4 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1... 213 1e-53 UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 212 2e-53 UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alan... 212 2e-53 UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 211 4e-53 UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax... 211 4e-53 UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 211 4e-53 UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 211 6e-53 UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 210 1e-52 UniRef50_C8RSC7 PBP4 family D-alanyl-D-alanine carboxypeptidase,... 209 2e-52 UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=De... 207 6e-52 UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 207 9e-52 UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 ... 207 1e-51 UniRef50_Q0FY12 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 206 1e-51 UniRef50_C2CX37 Possible D-alanyl-D-alanine carboxypeptidase (Pe... 206 1e-51 UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al... 205 3e-51 UniRef50_C9NA46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 202 2e-50 UniRef50_B3DR07 D-alanyl-D-alanine carboxypeptidase n=11 Tax=Bif... 202 2e-50 UniRef50_D2RBZ9 Putative D-alanyl-D-alanine carboxypeptidase/D-a... 202 3e-50 UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 202 3e-50 UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1... 200 1e-49 UniRef50_Q1J234 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=... 197 5e-49 UniRef50_B8DWB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 195 4e-48 UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces R... 194 7e-48 UniRef50_C4DKZ5 D-alanyl-D-alanine carboxypeptidase, serine-type... 193 1e-47 UniRef50_A0R596 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-a... 193 1e-47 UniRef50_A5CPH1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Micr... 193 1e-47 Sequences not found previously or not previously below threshold: >UniRef50_P24228 D-alanyl-D-alanine carboxypeptidase dacB n=157 Tax=Gammaproteobacteria RepID=DACB_ECOLI Length = 477 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 477/477 (100%), Positives = 477/477 (100%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP Sbjct: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV Sbjct: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS Sbjct: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE Sbjct: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK Sbjct: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS Sbjct: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS Sbjct: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN Sbjct: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 >UniRef50_C9XU16 D-alanyl-D-alanine carboxypeptidase dacB n=8 Tax=Enterobacteriaceae RepID=C9XU16_CROTZ Length = 478 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 396/477 (83%), Positives = 444/477 (93%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 MRFSRF +GLT+ +A + AANV+EYI QLPAGANLALMVQKVGAS+P ID+HSQQMALP Sbjct: 2 MRFSRFAVGLTTSVALNASAANVEEYINQLPAGANLALMVQKVGASSPEIDFHSQQMALP 61 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 ASTQKVITALAAL+QLGPD+RFTTTLE++G+V +GVL GDL+ARF DPT KRQD+RNMV Sbjct: 62 ASTQKVITALAALLQLGPDYRFTTTLESRGDVRDGVLDGDLIARFTGDPTFKRQDMRNMV 121 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LKK+GV QI GNVLIDTS FASHDKAPGWPWNDMTQCFSAPP+AAIVDRNCFSVSLYS Sbjct: 122 TALKKAGVQQIKGNVLIDTSAFASHDKAPGWPWNDMTQCFSAPPSAAIVDRNCFSVSLYS 181 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 AP+ G+ AF+R+ASYYPVT++SQV+TLPRGS+EAQYCELDVV GDLNR+TLTGC+ QR++ Sbjct: 182 APQAGEPAFVRIASYYPVTVYSQVKTLPRGSSEAQYCELDVVTGDLNRYTLTGCMTQRAD 241 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLPLAFA+QDGA YAGAILK ELKQAGIT++GTLLRQTQ NEPGTV+AS+QS PLHDLL+ Sbjct: 242 PLPLAFAIQDGAGYAGAILKAELKQAGITYNGTLLRQTQPNEPGTVIASRQSPPLHDLLR 301 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 +MLKKSDNMIADTVFR IG + VPGTWRAGSDAVRQILRQ+AGVD+GNTI+ DGSGLS Sbjct: 302 VMLKKSDNMIADTVFRTIGRNFYGVPGTWRAGSDAVRQILRQKAGVDLGNTIVVDGSGLS 361 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 RHNLIAPATMMQVLQYIA++D++LNFISMLPLAG+DGSL YRAGLH+AGVDGKVSAKTGS Sbjct: 362 RHNLIAPATMMQVLQYIARNDSQLNFISMLPLAGHDGSLLYRAGLHEAGVDGKVSAKTGS 421 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEP DQRNRRIPLVRFESRLY+D+YQNN Sbjct: 422 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPTDQRNRRIPLVRFESRLYRDLYQNN 478 >UniRef50_C9PQB2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PQB2_9PAST Length = 489 Score = 434 bits (1115), Expect = e-120, Method: Composition-based stats. Identities = 193/470 (41%), Positives = 295/470 (62%), Gaps = 3/470 (0%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 + F+ + +V LP G + +++ + + + ++ + LPASTQKV Sbjct: 23 LALFCLFSPFAYTSVDVSSLNQVLPDGTSSSVIAKNLTRNEIIAEHQANTFMLPASTQKV 82 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 +TAL A + L +FRF T+L T G V+ LKGDL+ RF DP L + N++A LKK Sbjct: 83 LTALTAKLALSDEFRFETSLLTNGKVQGNTLKGDLIVRFTGDPDLTSGQLSNLLAQLKKQ 142 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 + +I GN+++DT++F SHD+ GW WND+T CF+APPAA +D NCF + L + G+ Sbjct: 143 KITKITGNLILDTAVFTSHDRGLGWIWNDLTMCFNAPPAAVNIDNNCFYLELDANQAIGE 202 Query: 187 MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 I + + YPV +F QV EA YC+LDV+ D NR+ + GCL ++++P L+F Sbjct: 203 SVKINIPAQYPVQVFGQVYV--ASQQEAPYCQLDVMVNDNNRYQVKGCLARQNKPFGLSF 260 Query: 247 AVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKS 306 A+QD ++Y A+++ +LK+ GI ++G + + + G ++A S PL DL+K M+KKS Sbjct: 261 AIQDPSAYGAAMIQRQLKRLGIEFNGKVQTP-LMQQKGQLLAQHFSKPLPDLIKKMMKKS 319 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 DN IAD +FR + + P +++ GS A+RQIL +AG+ + N+IIADGSGLSRHNLI+ Sbjct: 320 DNQIADALFRSVAFHYYKRPASFQLGSQAMRQILHSKAGIKLSNSIIADGSGLSRHNLIS 379 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 M+QVL YIA+++ L + P+AG DG+L R L + V AKTG+L+GVYN Sbjct: 380 ANLMLQVLDYIAKNEATLKLMDSFPIAGVDGTLSGRGSLINPPLVKNVIAKTGALKGVYN 439 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 LAGF+T + + +AFVQ+++GY+ + + +R PLV+FES LY +Y+ Sbjct: 440 LAGFMTNSRNETLAFVQFINGYSTGDFESKTKRAPLVQFESGLYNTLYKE 489 >UniRef50_P45161 D-alanyl-D-alanine carboxypeptidase dacB n=37 Tax=Pasteurellaceae RepID=DACB_HAEIN Length = 479 Score = 425 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 201/469 (42%), Positives = 309/469 (65%), Gaps = 5/469 (1%) Query: 8 IGLTSCIAFSVQA-ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 L+ + A NV + +LP G+N+ + + + + DY+ L ASTQKV Sbjct: 14 FLLSVSFSLPTFANINVSDLTQKLPEGSNVGFIAKNINQNQIIADYNGSTFMLSASTQKV 73 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 TA+AA + L F+F T L + G ++NG L G+L+ RF DP L R + +++A LKK Sbjct: 74 FTAVAAKLALDDQFQFETALLSNGKIQNGNLDGNLIVRFTGDPDLTRGQLYSLLAELKKQ 133 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +I+G++++DTS+F+SHD+ GW WND+T CF++PPAAA +D NCF L + PG+ Sbjct: 134 GIKKINGDLVLDTSVFSSHDRGLGWIWNDLTMCFNSPPAAANIDNNCFYAELDANKNPGE 193 Query: 187 MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 + I V + +P+ +F QV S EA YC+LDVV D NR+ + GCL ++ +P L+F Sbjct: 194 IVKINVPAQFPIQVFGQVYV--ADSNEAPYCQLDVVVHDNNRYQVKGCLARQYKPFGLSF 251 Query: 247 AVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKS 306 AVQ+ +YA I++ +L+Q GI ++G +L + + G ++A S PL DLLK M+KKS Sbjct: 252 AVQNTDAYAAEIIQRQLRQLGIEFNGKVLLPQK-PQQGQLLAKHLSKPLPDLLKKMMKKS 310 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 DN IAD++FR + + P +++ G+ AV+ IL Q+ G+ GN+I+ADGSGLSRHNL+A Sbjct: 311 DNQIADSLFRAVAFNYYKRPASFQLGTLAVKSIL-QKQGIRFGNSILADGSGLSRHNLVA 369 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P TM+ VL+YIA+++++L+ + P+AG DG++ R GL + V AKTGSL+GVYN Sbjct: 370 PKTMLSVLEYIAKNEDKLHLMETFPIAGVDGTISGRGGLISPPLVKNVIAKTGSLKGVYN 429 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 LAGF+T A G+++AFVQ+++GY+ + + +R PLV+FE LY ++Y+ Sbjct: 430 LAGFMTNARGEKVAFVQFINGYSTGDLESKTKRAPLVQFERNLYNELYK 478 >UniRef50_D0YZY0 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Photobacterium RepID=D0YZY0_LISDA Length = 464 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 168/474 (35%), Positives = 270/474 (56%), Gaps = 14/474 (2%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEY-ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 F + + + AA + I +LP G +LAL+++ + + PA Sbjct: 2 FKQLLCVSLLATSLPTLAAFNPQAAIAKLPQGHDLALLIKDPATGKIIYQQRTDNLQAPA 61 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 STQK ITALAA + LG +FRF T +ETKG D++ F DPT R D+R +++ Sbjct: 62 STQKTITALAAKLYLGDNFRFYTDVETKGK--------DIIFNFSGDPTFSRTDLRELLS 113 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 +K G I GN+ ++ F +++ GWPW+ + C+SAP ++ ++ NC +LY+ Sbjct: 114 QIKAKGYKSIQGNIYLNGGHFTGYERGIGWPWDILGSCYSAPSSSITLEHNCVQGALYTN 173 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 G+ A I V S+ P+ + S + +AQ+C+LD++ N + ++GC EP Sbjct: 174 KGIGNKARINVPSHQPIQVTSTATIVTPSQKKAQFCQLDLISNPNNSYQVSGCSLAYKEP 233 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 +PL FAVQ+ Y A+++ ELK+AGI++ G + R + G +A S P+ +LL I Sbjct: 234 MPLKFAVQNTTKYTMAVMRQELKRAGISFKGQIYRNDTI--KGQRIARNSSKPMSELLDI 291 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 MLK+SDN+ AD + + IG + PG++ G A+++IL+ +A +D+ +TI+ DGSGLSR Sbjct: 292 MLKRSDNLFADNIAKTIGAKYYQQPGSYNNGVAAIKEILKTKANIDLSDTIMVDGSGLSR 351 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +N ++ +MQV+ YI +H N P+AG G+L+YR + + GKV AK+GSL Sbjct: 352 NNRLSANDLMQVITYIYKHKNLK-LFDDFPVAGESGTLRYRKSMRAGELKGKVIAKSGSL 410 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 YNLAG I T SG+ + F+Q ++ Y P ++ P+ +FE +LY+ +YQ Sbjct: 411 FATYNLAGMIKTKSGKPLLFIQLVTDY--HPINKTKGLPPISQFEQKLYQSLYQ 462 >UniRef50_A9NBH1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Coxiella burnetii RepID=A9NBH1_COXBR Length = 477 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 141/477 (29%), Positives = 240/477 (50%), Gaps = 14/477 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQAA-------NVDEYITQLPAGANLALMVQKVGASAPAIDYH 53 M+ ++ L S + A N++ + + + ANL +V V Sbjct: 1 MKKPFYLAILLSLFCSPLFAVEKQNPQTNINTILRSIKSKANLGFIVSDVKTGRVIFSER 60 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 SQ + PASTQK+ TA+AAL LG D++FTT L T G ++ L+G+L +F DP L Sbjct: 61 SQFLFSPASTQKLFTAVAALYYLGSDYQFTTALLTNGAIKGQTLQGNLTLKFSGDPELTT 120 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +D+ ++ LK+ G+++I G+V ID + + PGW +D++ ++AP +A I++RN Sbjct: 121 EDLNRLIEKLKELGIHRISGHVYIDNTAYNDVPYPPGWMLDDLSYGYAAPVSAIIINRNK 180 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 F + + A K A ++ P + + + + + C L V + N + L G Sbjct: 181 FLLHILPAKKGN--AQPTLSPILPAGVAHFSNRVRTTAHQIKQCPLTVYSDNRNNYQLAG 238 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 C+ + A+++ YA +LK L I + G +L + V+A +S Sbjct: 239 CINRAWGQQRRTLAIRNPVIYANVLLKQALADNVIQYQGPILLAGS-SANDVVLAEHKSP 297 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL +LK MLK SDN+ D++ + +G + PGTW+ G A+++IL + G+D N +I Sbjct: 298 PLRHMLKEMLKNSDNLTTDSLLKKMGERFYKKPGTWQNGLHALKKIL-EPTGIDFKNNLI 356 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNEL-NFISMLPLAGYDGSLQYRAGLHQAGVDG 412 DG+GLSR+NL++P M ++L++ + LP+ G DG+L R + Sbjct: 357 NDGAGLSRYNLVSPDQMAKLLRFAYNQKTIRDPLLKALPIGGKDGTLAGR--MRSIANSE 414 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +V AKTGS+ GV LAG++ T + ++F ++G+ E + L F + Sbjct: 415 RVHAKTGSMAGVSALAGYLRTRQNKVLSFAIMINGFVGETHAYSHLEDRLCEFLVKF 471 >UniRef50_B4W3H6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4W3H6_9CYAN Length = 515 Score = 400 bits (1027), Expect = e-110, Method: Composition-based stats. Identities = 110/460 (23%), Positives = 207/460 (45%), Gaps = 14/460 (3%) Query: 14 IAFSVQAANVDEYITQLPAG-ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + A++D + A +++Q + + P + +PAS K+ T AA Sbjct: 63 ICPADLKASIDAIANRPEFDYARWGILIQPLFSDTPLYSRERDRYFIPASNLKLFTTAAA 122 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L QLG +FR T++ G G + L DP+L ++++ L++ G+ ++D Sbjct: 123 LSQLGANFRIRTSVY--GTPTEGTIP-QLRVVGRGDPSLNTDQLKDLAQQLRRQGIRRVD 179 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PKPGDMAFI 190 ++++ F+ P W W+D+ + + I++ N ++L +P + + Sbjct: 180 -QLIVEDRYFSEPKVNPTWEWSDIQFYYGTAVNSLILNENAVLLTLTPQTVGQPLTVTWA 238 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +Q T E+ + + G L + A A+ D Sbjct: 239 DPIAAKQWQIENQTVTTEAEPTESINISGVL---GKPLLRIRGQLAADAGLWLTAVAIPD 295 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 A+Y + L +GI L+ + T +A+ S PL +L+ ++S+N+ Sbjct: 296 PANYFLQHFRRALADSGIQVERGLVTTEPNFQEDTELAAVDSPPLSELIAETNQQSNNLY 355 Query: 311 ADTVFRMIGHA-RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ + R +G + T AG + +R L + GV+ + ++ADGSGLSRHNL++P Sbjct: 356 AEALLRSLGVTDKEADESTATAGREQIRASLAE-LGVEPESYVLADGSGLSRHNLVSPTA 414 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 ++Q LQ IA+ +++ L +AG +G+L+ R G+V AKTG++ GV L+G Sbjct: 415 IVQTLQAIARTPMAQSYLDSLAVAGVEGTLRQR--FQNTPAQGRVYAKTGTMTGVSALSG 472 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 ++ Q + F ++ + R +V SRL Sbjct: 473 YVEVPDYQPLVFSIMVNQSNQSVSTIRQAIDEIVVLLSRL 512 >UniRef50_C1PF66 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus coagulans 36D1 RepID=C1PF66_BACCO Length = 495 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 125/468 (26%), Positives = 214/468 (45%), Gaps = 18/468 (3%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 C A G +A+ V+ + + + + PAS K++TA AA Sbjct: 30 CGKKETDAKIAGILEAAPLKGGIVAISVRSADSGKLLYEQNGNTLLRPASNMKLLTAAAA 89 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L LG + RF T + G ++NG L GD+ + G DP L + D+ + A LKK G+ +I Sbjct: 90 LETLGKNTRFKTGVYRTGAIQNGTLYGDIYIQGGGDPALLKSDLADWAAELKKQGIRRIQ 149 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN------CFSVSLYSAPKPGD 186 G+++ D S + + PW+D + + A +A + N + A KPG Sbjct: 150 GDLVGDDSRYDDTRYSLDLPWSDEQEYYGAQISALTLSPNRDYDAGTAIFEVVPAKKPGM 209 Query: 187 MAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 A I++ V + + VRT+ G + + N FT +G + S + Sbjct: 210 KARIKMVPESGMVKLVNHVRTVRDGEQQEDDIVISRA-HGGNTFTASGTITADSAAVRQW 268 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 AV D A + ++ K L++ GIT GT+ +V + V QS PL ++ LK Sbjct: 269 KAVWDPAKWVLSVFKKTLEENGITVQGTIKT-GRVKDAAVPVLFSQSPPLSSIMVPFLKF 327 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 S+N IA+ + + +G G+W G + +R + G+D ++ DGSG+S +L+ Sbjct: 328 SNNTIAEMLVKEMGKTEKG-EGSWEKGLEVIRSV-AGNFGMDPDQMMLRDGSGISHADLV 385 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGS 420 + +L I + D F LP+AG + G+L+ R G+V AKTGS Sbjct: 386 RANDLTALLYRIQEKDWFPCFFDALPVAGAENRLEGGTLRNR--FKGTAARGQVFAKTGS 443 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 + GV L+G++ SG+++ F ++ E A + +++F ++ Sbjct: 444 ITGVSTLSGYMQATSGEKLIFSILINNVLDEEAVHQAEEQIVLQFINQ 491 >UniRef50_C0ZE58 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Brevibacillus brevis NBRC 100599 RepID=C0ZE58_BREBN Length = 964 Score = 396 bits (1018), Expect = e-109, Method: Composition-based stats. Identities = 117/466 (25%), Positives = 227/466 (48%), Gaps = 12/466 (2%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 +S +A ++ D + G + V + +++++ +PAS K+ Sbjct: 34 ATSSSPLALHIEKFLADLKNDENSKGMYAGIAVYDLTEKRYVYKHNAERNFVPASNMKLF 93 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENG-VLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 T +A + +LGPD+++ T + G V NG +L+GDL+ + DP+LK +D++ M +K Sbjct: 94 TTIAGMDKLGPDYQWKTEVFVSGKVNNGGILQGDLILKGYGDPSLKPEDLQQMAKAIKDL 153 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +I+GN+L+D S F W W+D +SA + V++N +++ D Sbjct: 154 GIKRINGNLLLDDSYFDETRLGTSWMWDDEPYGYSAQISGLAVNKNVTTLTATPGKTVND 213 Query: 187 MAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 + + + +T+ +Q++T + L P + ++G + ++ P Sbjct: 214 APVLTMNPATTYITVTNQLKTTA----GKESNVLVERPRGKSEIIVSGTIGVQAAPYDED 269 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 ++D A Y G + KD+L++ GI + V + G + + S PL ++ + K+ Sbjct: 270 VTMEDPAFYVGDLWKDQLQKQGIALHPKAEVKKTVLQSGVPLYTHLSKPLGEITVELNKE 329 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 SDN A+ + + +G + G++ AGS+AV +++ +AG++ DGSGLSR N I Sbjct: 330 SDNFYAEMLVKTLGVTQKG-EGSFEAGSEAVADVMK-RAGIE-SGFRQVDGSGLSRFNWI 386 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 P M++ L ++ + + LP+AG DG+L+ R + + + AKTGSL GV Sbjct: 387 TPEQMIEALIFLQEQEYRTELEKSLPIAGVDGTLKNR--MKGTSAEKNLVAKTGSLSGVN 444 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 ++G++T +G ++AF ++G R + + + Sbjct: 445 TMSGYVTAKNGHKLAFSILINGIYKSKY-ARELQDRIGILLTTYPD 489 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 115/466 (24%), Positives = 211/466 (45%), Gaps = 23/466 (4%) Query: 18 VQAANVDEYITQLPAGA-NLALMVQKVGA--SAPAIDYHSQQMALPASTQKVITALAALI 74 +A +D + A ++++ + + + + PAS K++T AL Sbjct: 505 PLSAMIDPILDTPEAAGVTAGILIKSLDTTGDPVLYERDADTLLTPASNLKLLTTATALN 564 Query: 75 QLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD---------IRNMVATLK 124 QLG D+ F T + + +G+ +G+L + DPTL ++ I + LK Sbjct: 565 QLGSDYVFKTEVFGDAPITSSGIQQGNLYVKGYGDPTLHTENALQVQEGVSIEKIAGWLK 624 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + G+ +I+GN+++D S F GW W+D + ++ A ++R + A Sbjct: 625 QQGITRINGNLVMDDSYFDQQRLGLGWAWDDESYYYNPTIGALALNRGTVMIEFKPANDA 684 Query: 185 GDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 G I V V + ++ +T+ +G + N L G LP E Sbjct: 685 GKPVDINVLPKTAYVQVINEAKTVQKGEENTFAI---LRDRGTNTIRLLGNLPLDHEGDY 741 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 V++ A Y G +LK+ L+Q GI ++ + + QV +S PL D+++ + Sbjct: 742 ERVPVEEPAKYVGTVLKETLQQQGIAFAPKSEVLIQQVPPAAVKWTQFESLPLKDIVQYL 801 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 K+SDN A+ + + +G A+ G+ +G++ V++ + G + DGSGL+R+ Sbjct: 802 NKRSDNYYAEMLLKTLGAAKKGK-GSAASGAEVVQEAVASLGG--NTTFDMMDGSGLTRY 858 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 NLI+ + VL+ + + + LP+AG DG+L+ R L + AKTGS+ Sbjct: 859 NLISARQIASVLEGMTKESTFAAYDESLPIAGIDGTLKNR--LKDTPAANNLHAKTGSMT 916 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 GV L+G+ITT G+++ +GY + + L+ + Sbjct: 917 GVNTLSGYITTKGGEKLIVSILFNGYVEDEELFTKMQDQLITILAS 962 >UniRef50_D0M7Y1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Vibrio RepID=D0M7Y1_VIBSE Length = 473 Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 170/480 (35%), Positives = 277/480 (57%), Gaps = 16/480 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHS-QQMAL 59 MR ++ +S ++ QA E + P G+ ++L+ +K+ +A H +Q+ Sbjct: 1 MRLRWPLLIFSSLLSAFSQAYPHQEVL---PEGSRISLVAEKLSENAELDGVHPTEQLFP 57 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K++TALAA ++LG +FRF T LE + D V F DPTL+ D++++ Sbjct: 58 PASTLKIVTALAAKLELGDNFRFRTKLEASSS--------DAVIYFVGDPTLQTNDLKSL 109 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + KK+G+ +IDG++ +D S F +++A GWPW+ + C+SAP + ++ NC S+Y Sbjct: 110 LTLAKKNGLKRIDGDLWLDNSAFTGYNRAVGWPWDILGVCYSAPASTITLNNNCVQASIY 169 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + G + V + P+ + S V T+ + ++++C+L +V N + LTGCL +R Sbjct: 170 TQKDGG--TRVYVPEHQPIRVTSTVETVSKTIKKSRHCDLGLVANPDNNYKLTGCLVERD 227 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 +PLPL FAVQD Y L LKQ I SG + + + ++A QS L D+L Sbjct: 228 KPLPLKFAVQDPELYTSHRLAALLKQLNIELSGKIRIGSAPEKQRKLIAMHQSEALTDIL 287 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 + MLK SDN+IADT+ + +G F G++ G++A++QI+ G+DI N + DGSGL Sbjct: 288 EEMLKNSDNLIADTLTKTLGAKFFVQSGSFANGTEAIKQIIFANTGIDIRNARLEDGSGL 347 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SR+N I+ M ++L+YI QH++EL I+++P +G G+L+YR + + + G++ AK+G Sbjct: 348 SRNNRISATKMAEILRYIWQHEDELKLIAIMPKSGESGTLKYRQSMRKLPIKGQLIAKSG 407 Query: 420 SLQGVYNLAGFITTASGQR-MAFVQYLSGY-AVEPADQRNRRIPLVRFESRLYKDIYQNN 477 SL G YN+AG+ +GQ FVQ++S Y + D + P+ FE Y DI + Sbjct: 408 SLYGTYNMAGYGLDKNGQPNTVFVQFVSDYFPEKRDDNKPVIAPITHFEQLFYSDIVNFS 467 >UniRef50_D0I802 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Grimontia hollisae CIP 101886 RepID=D0I802_VIBHO Length = 471 Score = 393 bits (1011), Expect = e-108, Method: Composition-based stats. Identities = 176/474 (37%), Positives = 269/474 (56%), Gaps = 13/474 (2%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 I L ++F+ A +++ LPAG+ LAL V A A + + PASTQK Sbjct: 5 LIFFLLLPLSFATSAVPLNKIEAMLPAGSQLALSVYDASARAKIVSVDDDILLPPASTQK 64 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 V+TALAA + L PDF F TTL G DLV F DPTL R DIR +++ LK Sbjct: 65 VVTALAATLSLPPDFTFDTTLGQVGQ--------DLVFTFSGDPTLTRNDIRLLISALKA 116 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG 185 G+ I G++ +D SIF+ H++A GWPW+ + C+SAP +A ++RNC ++Y + K Sbjct: 117 KGIQHIRGDIWLDGSIFSGHERAVGWPWDILGVCYSAPSSAIALERNCVQGAIY-SEKNQ 175 Query: 186 DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 + V + PV + + + + E C+L++ N + L+GCL RS PLPL Sbjct: 176 PHTRVFVPEHQPVKVTTDAMAVTQSQQEQSLCDLELHYDSNNHYQLSGCLAHRSTPLPLK 235 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 FA+Q+ Y IL+ ELK A I G + T++A +S LL+ MLK+ Sbjct: 236 FAIQNPQKYVQDILQAELKTAAIIVDGKIKT-GSPTGTRTLLAKHRSDNRDALLETMLKR 294 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 SDN+IAD + ++IGH +N PGT+ G+ A++ IL ++ G+D+ + +I DGSGLSR+N + Sbjct: 295 SDNLIADNLLKIIGHRYYNQPGTFANGAAAIKAILLEKTGIDLTHAVIVDGSGLSRNNRM 354 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVY 425 + +M VLQY+ H ++MLP++G DG+L+YRA + A + ++ AKTGSL G Y Sbjct: 355 TASQLMDVLQYVYAHPQL-GLLAMLPVSGVDGTLKYRASVRHAPLKQRLIAKTGSLYGSY 413 Query: 426 NLAGFITTASGQRMAFVQYLSGYAVEPADQRNR--RIPLVRFESRLYKDIYQNN 477 NLAG + G+ + VQ ++ Y + + R P+ +FE LY+ + ++ Sbjct: 414 NLAGVLKNDLGKDLLVVQLVTNYHIPETEDRPDNVASPITQFERELYQALLTSS 467 >UniRef50_A1SZR5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Psychromonas RepID=A1SZR5_PSYIN Length = 480 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 170/479 (35%), Positives = 268/479 (55%), Gaps = 6/479 (1%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 F R + + ++ A LP G L+ +V + + +++ + PAS Sbjct: 2 FKRILCFALFLLPVNLLADQWSALHALLPKGTQLSYLVLDPANNQLLAESNAEILRTPAS 61 Query: 63 TQKVITALAALIQLGPDFRFTTTLETK-GNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 QK++TA AA + LG +FR+ TTLE +++N +GD+ RF DPTL R DI+ M+ Sbjct: 62 LQKLLTATAAKLYLGENFRYQTTLEGNKSHIKNNHYQGDIRLRFVGDPTLSRADIKEMLT 121 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 + K GV QI G++LI+ + F+ + + G WND+ C+++P A IV+RNC +L Sbjct: 122 SFKALGVKQIRGDLLINAAHFSGYQWSDGQAWNDLGVCYTSPSNAIIVNRNCVLGNLSVV 181 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 A + + SY PV + S V + + Q+C L + NR+ L GC+ R+ P Sbjct: 182 SADAKKARLFIPSYEPVEISSNVDVVTSAQRDEQFCALKMTRNSDNRYHLWGCMVPRNRP 241 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT--QVNEPGTVVASKQSAPLHDLL 299 LAF+V D +YA I++ ELK GI +G + + + V+ QS L LL Sbjct: 242 FGLAFSVNDPFAYASQIIESELKNVGIKLTGKVKIEQIKTAKKVSQVLVKYQSPELGKLL 301 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 +IMLK SDN+IAD++F+ +G A F G + G+ A++ IL++ GVD+ N +ADGSGL Sbjct: 302 EIMLKDSDNLIADSLFKTLGAAYFQQDGNFLNGAKALKLILQEN-GVDLENAYLADGSGL 360 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SRHNL++ M VL+Y+ Q+D +LN + +AG DG+L Y G+ + G + AKTG Sbjct: 361 SRHNLMSAKLFMTVLKYVYQNDAKLNLLDSFSIAGVDGTLHYHKGVAGPLLKGNIVAKTG 420 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ-RNRRIPLVRFESRLYKDIYQNN 477 S++GV NL G + TA G+R+ F ++GY D + + P+V FE ++ I +++ Sbjct: 421 SMKGVANLLGIVKTARGERL-FALIINGYNWPETDLTKATKSPVVIFEHAFFETIIKSS 478 >UniRef50_A0KWP7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Shewanella RepID=A0KWP7_SHESA Length = 513 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 155/474 (32%), Positives = 246/474 (51%), Gaps = 11/474 (2%) Query: 1 MRFSRFIIGLTSCIAFSV-----QAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQ 55 + + L S A + ++ + P + +AL+ + + + + Sbjct: 22 LLLGSLVSMLLSTQAHAAIHPMDESILAKQIADIAPRHSQVALLARDLSTNTLLYSQQAD 81 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + +PASTQKV+TA+ AL LGPDFR+ T L + + G + G + RF DPTL + D Sbjct: 82 TLFIPASTQKVLTAVTALATLGPDFRYVTELWSDAPIRQGHIAGSVYLRFSGDPTLTQDD 141 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 ++ + A L+K G+ I+G++ + +APGW W+D+ CF+AP ++ I+++NC Sbjct: 142 LKALFAHLQKQGITSIEGHLYLIGD-KQEQLQAPGWVWDDLGICFAAPVSSYIINQNCVY 200 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 + AS + V + S P+ + +C+LD+V N++ L GC Sbjct: 201 GQFAPSSAKHASEVKLRASSFGVKVSSDAIFSPKAGHD--FCQLDLVRLGQNQYHLRGCY 258 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 P +E +PLA A+ D +A L LK ++ SG + + ++AS SAPL Sbjct: 259 P-GNEAIPLAIAISDPEKFAMDTLTATLKGE-MSLSGKVKIGNAIPSKAKLIASHSSAPL 316 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +LLK ML KSDN+IAD++F+ +G + + G++ G+ A+R IL + G+D+ N I D Sbjct: 317 PELLKTMLLKSDNLIADSLFKRVGQSYYKAQGSFTHGAAAMRHILTE-LGIDLTNANIVD 375 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+NL++ + VL I Q + I LP AG G+LQYR G + + +V Sbjct: 376 GSGLSRYNLLSAKQLADVLALIYQDARFHSLIDSLPEAGVSGTLQYRLGYTKPPLKHRVF 435 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 AKTGS+QGV NLAGF+ A + + FV +G + E QR L Sbjct: 436 AKTGSMQGVANLAGFMRLAQQRDILFVVLENGISPETKKQRKPAFSADFLTRLL 489 >UniRef50_A5IAY8 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=6 Tax=cellular organisms RepID=A5IAY8_LEGPC Length = 597 Score = 390 bits (1001), Expect = e-107, Method: Composition-based stats. Identities = 132/472 (27%), Positives = 237/472 (50%), Gaps = 13/472 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN----VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQ 56 M+ + + + + S AA+ VD+ I +L NL ++V + + ++ + Sbjct: 1 MKRTLTGAFMWAVWSLSSHAASMQFEVDKLINRLNPHVNLGIVVTDLTSGETLYKRNANR 60 Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGN-VENGVLKGDLVARFGADPTLKRQD 115 + +PAS K+ + AAL+ LGPD++F L T N ++ GVL G+L DP+ R+D Sbjct: 61 LYIPASNMKLFSEAAALMALGPDYQFKNQLSTSANQLQQGVLHGNLYLHLSGDPSFSRED 120 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 ++ ++++LK + I GNV+ID+S+ + PGW +D++ + AP A +VD N + Sbjct: 121 LKTLLSSLKDWNITTIQGNVIIDSSLMSIPAYPPGWLTSDLSYSYGAPIAPLMVDSNRLT 180 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 +++ K G A + V + T C + N T+ GC+ Sbjct: 181 ITVNPGAKAGAPAIVEVDDGGGTINLNNQATTKASEKG---CGVGFYLDPENNLTVRGCV 237 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 + A+++ YA ++ EL ++ I +G +L + ++A++ S P+ Sbjct: 238 GLGQWAVQQRIAIKNPFVYAQGMIVSELAKSNIKLNGQVL-LGRAPAGTLLIATRYSKPI 296 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 L+ LK SDN+ AD+++ P W+ ++ L+QQ G+D+ ++ D Sbjct: 297 SQLMADTLKPSDNLYADSLYLHAAAKIKGSPVDWKQAQPVIKNFLQQQTGIDLKDSNFTD 356 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 GSGLSR+NL+ PA M +L+++ Q +I+ LP++G DG+LQ R G V Sbjct: 357 GSGLSRYNLVTPAQTMALLKFLYQRFPLSYEYIAALPISGRDGTLQKR--FKTPNQQGFV 414 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ-RNRRIPLVRF 465 AKTG++ G+ +L+G++ TA+G +AF Y++ +PA R L + Sbjct: 415 RAKTGTMTGMNSLSGYLYTANGHTLAFAMYINRLPGKPAGPGRPLLDALCTY 466 >UniRef50_D0MJV1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MJV1_RHOM4 Length = 497 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 126/504 (25%), Positives = 208/504 (41%), Gaps = 40/504 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP---------AGANLALMVQKVGASAPAID 51 MR + I L + A + A +V + S Sbjct: 1 MRLRIWPILLLLWTVPAPVHAQSPRTLQATLDRVLDDPAYESAFWGALVLDLRDSTVLYA 60 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 H++Q PAS K+ AAL QLGPDFR+ T L G V +GVL+G+L+ R DP + Sbjct: 61 RHARQNFTPASVTKLFITAAALEQLGPDFRYVTRLLADGPVVDGVLQGNLIVRGAGDPAI 120 Query: 112 K--------RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 R +L++ G+++I G+++ D + F GW W+D+T ++A Sbjct: 121 GGRFTDGDRTATFRAWADSLRRRGIHRIAGDLIGDDNYFDDTPLGTGWSWDDLTYWYAAE 180 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 +A + NC V++ + VT+ +Q T+P G + Sbjct: 181 ISALSFNDNCVDVTIEARRPGEPGRLTWEPPTTYVTLINQTYTIPAGQQLKEGYRRLP-- 238 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-------R 276 N L +P+ + V + Y +L++ L GI G + + Sbjct: 239 -GTNTIVLFSRVPEGRRDTE-SLTVHNPTRYFVHVLREVLLAEGIAVEGQPVDVDEFSIK 296 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR-----FNVPGTWRA 331 VA+ S PL ++++++ ++S N+ A+ + R +G R PG+ Sbjct: 297 PDYTAPNLWTVATYTSPPLSEIVRVINRRSQNLYAEMLLRTLGAERPVPDSTLTPGSAEM 356 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN---ELNFIS 388 G A + +AG+D DGSGLS NL++P +++L Y+A H + F + Sbjct: 357 GLAAAARTWL-RAGIDTSRIQFVDGSGLSAQNLVSPEATVRLLAYMAAHPDRAVWRAFYA 415 Query: 389 MLPLAGYDG-SLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LP G + +LQ R G V AKTG++ LAG++ TA G+ +AF + + Sbjct: 416 SLPTGGEEATTLQNR--FRAGRARGNVRAKTGTISNTSALAGYVRTADGRLLAFAIFCNH 473 Query: 448 YAVEPADQRNRRIPLVRFESRLYK 471 Y V R V +R Sbjct: 474 YTVPTRQVRRTIDAFVEHLARYRN 497 >UniRef50_B9ZME1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZME1_9GAMM Length = 488 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 114/470 (24%), Positives = 211/470 (44%), Gaps = 10/470 (2%) Query: 7 IIGLTSCIAFSVQA------ANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 + + QA A + I Q ++ L VQ+V A ++ Sbjct: 22 LCAALLLVLPPAQAQFEHLPAPLQRAIQAQGLPPDSVGLWVQRVPDGAVLARLNADTPYN 81 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST K+ T+LAAL +LGP++ +TT + V++GVL+GDLV R DP + ++ M Sbjct: 82 PASTVKLATSLAALHELGPNYTWTTEIWATRPVQDGVLRGDLVIRGTGDPGMVTEEYWRM 141 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + L+++G+ +I+G+V++D S F + PG + ++ P A V+ N + Sbjct: 142 IGELRRTGLKRIEGDVILDASHFQLPNGDPGDFNRQPLRAYNQLPYALHVNSNSQRFHVR 201 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + + + + + ++++ G E Q V + R T +G P Sbjct: 202 PERRGNGIDVVVDPPLPGLEVVNRLQPTRGGCGEWQRGIQFNVDQNAQRVTFSGQYPVNC 261 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 + +V + + + Q G +G + + +S PL DL+ Sbjct: 262 GNYEMLRSVLTPEANHAEMFRMAWDQWGGELTGRVRTGVLPVLHDEPIVRHRSRPLSDLI 321 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 ++ K S N+++D + +G + P T G +A+ LR GVD+G ++ +GSGL Sbjct: 322 RVSNKWSSNVMSDHLLLTLGARKNGPPATMDKGREALVHSLRD-LGVDVGGMVVDNGSGL 380 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SR + + ++L+ +H + F S L L+G DG+L+ R + G++ KTG Sbjct: 381 SRDARMTARQLGEILEAGWKHPHRPEFQSSLALSGLDGTLRNR--FRNGDLRGQMHLKTG 438 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + V +AG++ T+SG + ++G RN + ++ + L Sbjct: 439 HINEVSAVAGYVRTSSGDDVIVTVLVNGPRAHIGHGRNLQDAVLEWAHGL 488 >UniRef50_A8PP32 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rickettsiella grylli RepID=A8PP32_9COXI Length = 497 Score = 385 bits (988), Expect = e-105, Method: Composition-based stats. Identities = 138/486 (28%), Positives = 238/486 (48%), Gaps = 24/486 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQ---------AANVDEYITQLP---AGANLALMVQKVGASAP 48 + I+ + I ++++ + I Q+ G N + +Q + Sbjct: 15 LIRLFCIVLFINPIKSLAYYNNDYTQEPSSSIQQNINQILSHFKGFNTGISIQSLSTGKI 74 Query: 49 AIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN--VENGVLKGDLVARFG 106 Y++ + +PAST K+ T +AAL LGP F+F T T V +G L G+L +F Sbjct: 75 IYQYNANRRFIPASTLKLFTGIAALEYLGPHFQFKTRFLTNSGSIVRHGTLMGNLYIKFS 134 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP L D+++M+ TL + +N++ GN++ID ++ PG +D C++AP A Sbjct: 135 GDPYLTLNDLKDMLETLNEQHINKVQGNIIIDDTVIDRSTWPPGRVIDDRIFCYAAPVTA 194 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 I++RNCF++S+ + + + + + +Q T R +L Sbjct: 195 TIINRNCFNLSIKPTQNLLHPTVTKSSRHLGIVIDNQAVT-KRLKQARYSLDLKPNAVSK 253 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV 286 N +TLTG L ++ PL A A+Q+ I+ LK+ I +S + + Sbjct: 254 NHYTLTGYLSRKMGPLSFAVALQNPNLATYDIVAGLLKKYSIRYSSLIF--GKTPPFAKT 311 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 +A S L L+K MLKKSDN+IAD++ + +G F+V G+W++G +AV+ IL + + Sbjct: 312 LAENSSPELAFLIKNMLKKSDNLIADSLLKKLGEKYFSVQGSWKSGRNAVQAILANKTNI 371 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGL 405 + ++ DGSGLSR N I P +++L + + F LP +G DG+L++R Sbjct: 372 NFKQLVMVDGSGLSRANSITPNAFVKLLNFAYTQLPDSDLFFESLPRSGIDGTLKHRL-- 429 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI---PL 462 GK+ AKTGS+ G+ +LAG+I TA+ +AF ++ +Q R+ + Sbjct: 430 -GGASLGKIHAKTGSMHGISSLAGYIQTANHHILAFSILINDPVPGKNNQGGYRLLENRI 488 Query: 463 VRFESR 468 F ++ Sbjct: 489 CEFLAK 494 >UniRef50_B7K701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7K701_CYAP7 Length = 475 Score = 383 bits (985), Expect = e-105, Method: Composition-based stats. Identities = 115/467 (24%), Positives = 207/467 (44%), Gaps = 19/467 (4%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 G I S ++ I + + ++V+ + Q +PAS K Sbjct: 21 FPGFAQSICPSNLGQEIEAVIQRPEWRRSRWGILVETLEDGQILYGVDENQYFVPASNTK 80 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 ++T AAL LG DFR T++ G L DP+L + ++ + LK+ Sbjct: 81 LLTTAAALRVLGADFRVRTSVYGVGEPPILA---SLRVVGRGDPSLTNKQLKLLAQQLKE 137 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PK 183 GV QI +++D S F P W W+D+ ++ + I++ N + + Sbjct: 138 KGVQQIS-ELIVDDSYFKELPLNPSWEWSDLLFYYTPSVNSLILNENTSLIKIVPQGLNY 196 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 P + + +++ V T +GS + D +TG LP E Sbjct: 197 PAKLVWSDAIVARQWRVYNDVITTRQGSRKTIDFYRDFEQP---IIYITGQLPVDDEGYT 253 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 A AV D ASY + L + GI + T+++++ + G +A +S PL +L+ + Sbjct: 254 TAIAVADPASYFLESFRSILLEEGIKVNRATIIKESSRFDLGEELAFVESPPLGNLIDKI 313 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 +S+N+ A+ + R++G N G + +++ L G++ + +ADGSGLSR Sbjct: 314 NGESNNLFAEAILRILGSESRNQ-----MGVEVIKENLID-LGIEEDSFSLADGSGLSRQ 367 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 NL+ P T++QVL+ +AQ + + + L +AG G+LQ R G + KTG+L Sbjct: 368 NLVTPETLVQVLRLMAQSPDAEIYQNSLAVAGEKGTLQRR--FLDTDFVGNLQGKTGTLT 425 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 GV L+G++ + Q + F ++ ++ R ++ S+L Sbjct: 426 GVSALSGYLFVPNYQPLVFSIMINYTDQPGSNLRKAIDEIIILMSQL 472 >UniRef50_C6N6B5 D-alanyl-D-alanine carboxypeptidase, fraction B; penicillin binding protein 4 n=2 Tax=Legionella RepID=C6N6B5_9GAMM Length = 611 Score = 383 bits (983), Expect = e-105, Method: Composition-based stats. Identities = 126/469 (26%), Positives = 228/469 (48%), Gaps = 9/469 (1%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAST 63 + L S + VD+ I ++ NL ++V + + ++Q++ +PAS Sbjct: 22 GFCLWALWSGSQCASVQGEVDKLIQRVNPQVNLGMVVVDLNSGETLYRRNAQKLFIPASN 81 Query: 64 QKVITALAALIQLGPDFRFTTTL-ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT 122 K+ + AAL+ LGPD+ F L + G V+ GVL+G++ + DP+ R+D++ ++++ Sbjct: 82 MKLFSEAAALMVLGPDYHFKNQLSLSSGKVQQGVLQGNVYVQLSGDPSFSREDLKKLLSS 141 Query: 123 LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 LK +N I GNV ID+S+ PGW +D++ + AP A +VD N +V++ Sbjct: 142 LKDWNINTIQGNVYIDSSLAQVDAYPPGWLTSDLSYSYGAPTAPVMVDANRLTVTVNPGA 201 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 GD+A + V + T + C + N T GC+ + Sbjct: 202 HTGDLAVVEVDDGGGAISINNQVTTKASAKG---CGVGFSLDKDNHLTARGCVGVDQWAV 258 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 A+++ +YA ++K+ L A I +G + ++A++ S L +L+ Sbjct: 259 QQRMAIKNPLAYAQGMIKNNLASANIQLNGEVQ-LGTAPAGSILIATQYSKALSELMADT 317 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 LK SDN+ AD+++ P W+ ++ L+ Q G+D N + DGSGLSR+ Sbjct: 318 LKPSDNLYADSLYLHAAAKLNGSPVNWKGAEPLIKNFLQAQTGIDFKNAVFTDGSGLSRY 377 Query: 363 NLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +L+ P + +L ++ Q +IS LP++G DG+LQ R + G V AKTG++ Sbjct: 378 SLVTPEQTISLLTFLHQRFPLSYEYISALPVSGRDGTLQKRFRVPT--QQGFVRAKTGTM 435 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSG-YAVEPADQRNRRIPLVRFESRL 469 G+ +L+G++ T++G +AF Y++ R + + +L Sbjct: 436 TGINSLSGYLYTSNGHTLAFAMYINRKPGTSAGPGRPVLDAICTYFLQL 484 >UniRef50_A3QED0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Shewanella RepID=A3QED0_SHELP Length = 543 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 152/448 (33%), Positives = 246/448 (54%), Gaps = 11/448 (2%) Query: 30 LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETK 89 P + L++ Q + + +++ + LPASTQK++TA+AA+ LG +F F T TK Sbjct: 83 APPHSQLSIFAQDLSNNEILYQHNADTLVLPASTQKLLTAVAAMRVLGEEFSFATQFSTK 142 Query: 90 GNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 G + +GVL GDL F DPTL D+R M+ +LK +G++ + GN+L+ +AP Sbjct: 143 GRLSHGVLTGDLYLSFSGDPTLTTDDLRAMLKSLKDAGIHTVKGNLLLVGQA-KEQTRAP 201 Query: 150 GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 GW W+D+ C++AP ++ IV++NC L + + Y P+ + + Sbjct: 202 GWVWDDLGICYAAPVSSFIVNQNCVKGQLKP-KLASSASQLNFPRYLPIKV--STTAVFD 258 Query: 210 GSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGIT 269 + + +CEL++ N + ++GC P +PL LA AV D A YA +L LK A I Sbjct: 259 KTQQEPFCELNLARLPDNHYHISGCYP-GDKPLNLAIAVDDPALYAKEMLTRMLKSAHIK 317 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 SG + + + + +S L LL+ ML SDN+IAD++F+ +G + V + Sbjct: 318 MSGQVAIAHRTPIGLKPLVTHKSEGLEALLRTMLLDSDNLIADSLFKAVGAHYYKVAENF 377 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 AG+ AV+ IL + G+D+ ++ I DGSGLSR+NLI+ + +VL +A+ + I + Sbjct: 378 HAGARAVKAIL-EADGIDLSHSQIIDGSGLSRYNLISARQLAEVLGLMAKDEKLRPLIEL 436 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYA 449 LP+AG G+L Y+ G HQA + KVSAKTGS+QGV NLAG+++ + ++ FV +G + Sbjct: 437 LPVAGVSGTLNYKRGFHQAPLMNKVSAKTGSMQGVDNLAGYLSLDASHQILFVVMENGQS 496 Query: 450 VEPADQRNRRIPLVRFESRLYKDIYQNN 477 + Q F + + + N Sbjct: 497 QKSKKQSPAP-----FSALFLQSLLDNQ 519 >UniRef50_B6END1 Penicillin-binding protein 4 n=1 Tax=Aliivibrio salmonicida LFI1238 RepID=B6END1_ALISL Length = 469 Score = 380 bits (977), Expect = e-104, Method: Composition-based stats. Identities = 160/479 (33%), Positives = 258/479 (53%), Gaps = 18/479 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M SR I S +FS A++ I LP+G+ A++V+ + + ++ P Sbjct: 1 MPLSRLFILSLSLYSFSTF-ASIPSSIQLLPSGSRAAIVVESLHDQSIEFQQKENELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST KV TALA+ + LG +F+F TTL + F DP+L R+++ ++ Sbjct: 60 ASTLKVATALASRLALGKNFQFKTTLHK-------TKHNSVQLTFSGDPSLTRENLSSL- 111 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 K SG+ I G++ +D SIF +++A GWPW+ + C+SAP +A +D NC S+ + Sbjct: 112 --FKNSGLKNIKGDLWVDDSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASIST 169 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F+ + + P++ + RT+ + +C+L++ N + L+GCL RS+ Sbjct: 170 NENGTTRVFVPI--HQPISFTTAARTVSAKEKKNSFCDLELTTQGNN-YHLSGCLVARSK 226 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHDL 298 PLPL FAVQ+ + L L + I SG ++ + ++AS QS PL L Sbjct: 227 PLPLKFAVQNTTEFTEQTLLRILNEQNINLSGKIIFGNSTGKIQKTVLLASHQSEPLMVL 286 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLKKSDN AD + + +GH + PG++ G+ AV+ IL +QA VD+ N +I DGSG Sbjct: 287 LNHMLKKSDNHYADNLVKTLGHYHYQQPGSFSNGTAAVKDILLKQANVDLTNAVIVDGSG 346 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+N + M +LQ++ ++D EL I++LP +G DG+L YR + + + G + +K+ Sbjct: 347 LSRNNRMTANQMKSLLQFVYRYDKELGLIALLPTSGIDGTLIYRNSMRKEPIKGSIKSKS 406 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD--QRNRRIPLVRFESRLYKDIYQ 475 GSL G YN+AGF+ FVQ+++ Y A+ P+ FE Y+ + + Sbjct: 407 GSLFGSYNMAGFVGLEGNNPQLFVQFVADYHPIAAEEGVLPVERPIDSFEKAFYQALIK 465 >UniRef50_Q0A7Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=Q0A7Z9_ALHEH Length = 480 Score = 380 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 110/456 (24%), Positives = 193/456 (42%), Gaps = 13/456 (2%) Query: 20 AANVDEYITQLPAG-----ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 AA + + + Q +++ VQ+VG P + + PAS K++T+ AAL Sbjct: 26 AAGLPDALAQAVDRLGVDREQVSIWVQRVGEPEPLLAHQVDTARNPASVLKLVTSFAALE 85 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 LGPD+R+ T L G V +GVL+GDL+ R G DP L ++ + L++ GV +I G+ Sbjct: 86 GLGPDYRWRTELYALGPVRDGVLEGDLLIRGGGDPFLVTEEFWKLTGALRRQGVREITGD 145 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 ++ D S F + + PG + ++ PP +V+ N S + G + Sbjct: 146 LVYDLSYFNLYPEDPGAFDGRPHRAYNQPPHPLLVNFNAISFEIKPT-TGGAPRVVADPP 204 Query: 195 YYPVTMFSQVRTLPRGSAEAQ----YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 +T+ +++ G Q + ++ G L L G P + L V Sbjct: 205 LPGLTLDNRLGLRQSGCGGFQRGIAFQVVEQPGGSLPGVLLEGRYPSHCDEWRLVRTVLP 264 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 Y + Q G ++G V +S PL LL+++ K S+N++ Sbjct: 265 VEDYVHQLFTLLWGQWGGIFAGGWREGRGPAPGAEPVVVHESPPLGQLLRLVNKYSNNVM 324 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 + +G + P T G +V +L G+D + +G+GLSR I + Sbjct: 325 TRHLKLTLGAEHYGAPATSEKGRRSVLDVLHAH-GIDTAGIVFDNGAGLSRDTRITARQV 383 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 Q+L + F+S L +AG DG++ R G++ KTG L V +AG+ Sbjct: 384 AQLLTVARERPWMAEFVSSLAIAGTDGTMGRR--FQDGPERGRMHLKTGHLNDVAAIAGY 441 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFE 466 + + + V ++ R + ++R+ Sbjct: 442 LHPPGAEPLVAVVLVNHPDAHRGAGRGIQEAVLRWA 477 >UniRef50_D2Q2Y6 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kribbella flavida DSM 17836 RepID=D2Q2Y6_9ACTO Length = 528 Score = 380 bits (975), Expect = e-104, Method: Composition-based stats. Identities = 117/452 (25%), Positives = 191/452 (42%), Gaps = 20/452 (4%) Query: 21 ANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 +D + G+ + L+V+ D + LPAS K+ ++ AA+ LG D Sbjct: 47 QQLDTLLGDPRFQGSQVGLLVRDATTGETLYDRNGGTRLLPASNTKLFSSAAAMETLGAD 106 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 +RF T + V +G L+GDL + DPT D + + +SGV +IDG+++ D Sbjct: 107 YRFHTDVLATAPVRDGKLRGDLYLKGYGDPTSLESDYVALAKQVAQSGVRRIDGDLVADD 166 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVA 193 + F W W+D ++A +A + D V G +++ Sbjct: 167 TYFDHVRLGDSWAWDDEPFYYAAQISALTLAPNADYDSGTAIVESRPGSTVGAPVDLKLV 226 Query: 194 SYYPV-TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 V + S T GSA E D N +TG +P S V + Sbjct: 227 PATSVLKLVSTATTGAAGSANTLSIERD---HGTNIVRVTGSVPAGSSVGTEWVTVWEPQ 283 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 YA + + L G+ G + +A +S + L+ +K S+NM A+ Sbjct: 284 VYAADVFRRALAAQGVRVDGRIKVAATPAAGTRRLARDESMTVGQLMNPFMKLSNNMHAE 343 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 T+ + +G A G+W AG V Q + GVD G ++DGSGLSR + P ++ Sbjct: 344 TLVKAMG-AVAAANGSWPAGLGVVTQYAKS-VGVDTGTIRLSDGSGLSRKVNVTPKSVTD 401 Query: 373 VLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 +L + + + LP+AG G+L+ R + V AKTGSL GV L Sbjct: 402 LLVAVQKEPWFQQWYDALPIAGNPDRFTGGTLRNR--MAGTPAANNVHAKTGSLTGVTAL 459 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 +G+++T G+++ F + Y V P + Sbjct: 460 SGYVSTKDGRKLVFSMISNNYLVSPRAVEDAV 491 >UniRef50_D0KXT5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KXT5_HALNC Length = 489 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 107/482 (22%), Positives = 202/482 (41%), Gaps = 19/482 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN-----------VDEYITQLPAGANLALMVQKVGASAPA 49 +RF + ++Q+A ++ Q + +L + VQ V ++ P Sbjct: 9 LRFFLLAAFFLGIGSANIQSATAAGAVGMPPSVLETLKKQKLSLGDLGIWVQAVDSNKPL 68 Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 + + + PAS K++T++ AL LG +F++TT + NGV+ G+L + DP Sbjct: 69 LTHLPDDLFNPASVMKLVTSVVALDVLGTNFQWTTRVYADALPVNGVVHGNLYIKGEGDP 128 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 + +D+ ++V L G++++ G +++D S F P + + ++A P A ++ Sbjct: 129 WFRSEDLWDLVRQLSDLGIHEVTGKLVLDNSYFDPGPADPSDFDDHPERVYNALPQALLL 188 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 D V + + G A +R + L +G+ Q + + + Sbjct: 189 DNRATRVLIVPPDRSGAGAVVRAWPPNSNIAINNDVKLVKGACTGQTNQPSIAVLGPDTN 248 Query: 230 T----LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 T ++G + +P + + K + G GT + V + Sbjct: 249 TPTLNVSGKISTECQPDQFYLVAGNANDAFYSAFKHLFEGQGGKIDGT-WAEGVVPKTAV 307 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 + S L L + K S+N++A +F +G PGT + L++Q G Sbjct: 308 YLVQHNSENLTQYLYLQNKWSNNLMARQIFLTMGAEIKGAPGTLLKSKAVIADWLKRQ-G 366 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 + I +GSGLSR I+P M Q+L Y + ++ LP+AG DG+++ R + Sbjct: 367 FNWPGFDIENGSGLSRKARISPKEMGQLLMYAWRSPTMPELMASLPIAGIDGTMRKR--M 424 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 G + KTG+L+ V AG+I T SG+R V + V+ + ++ + Sbjct: 425 RGEPARGMIHLKTGTLRDVRAGAGYIITQSGRRYVVVILQNEQNVQNGGGSKVQDAILDW 484 Query: 466 ES 467 Sbjct: 485 LY 486 >UniRef50_C0N2B8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N2B8_9GAMM Length = 465 Score = 378 bits (970), Expect = e-103, Method: Composition-based stats. Identities = 157/454 (34%), Positives = 258/454 (56%), Gaps = 15/454 (3%) Query: 24 DEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFT 83 + + LP G+ +++V + + +++ S + PAS QK++TALAA +QLG DF FT Sbjct: 27 NASLPLLPTGSEASILVVESNTNKTLLNHRSDTLRPPASVQKLVTALAATLQLGTDFTFT 86 Query: 84 TTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 T +E K D++ RF DP+L+R +IR +VA LK+ + I GNV ++ S F Sbjct: 87 TDIEAKDQ--------DVIFRFSGDPSLRRDNIRQLVARLKRD-RSVIRGNVYLNGSAFN 137 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ 203 ++A GWPW+++ C+SAP ++ +D NC + K ++ P+ + Sbjct: 138 EFERADGWPWDNLGVCYSAPASSISLDDNCAVAKMVFKDKESTKLGFEISRDAPINIIEN 197 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 + L E +YC ++ + N+F L GC+ + P L+FA+Q+ Y +++ EL Sbjct: 198 LDLL--DGLEKRYCNFKLLADNTNQFKLGGCIGRHEIPRFLSFAIQNTELYVAEMIRREL 255 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 + AGI G ++R + G V+A +SA L L+ M+K SDN+IAD + + IG F Sbjct: 256 EHAGIELQGNIIRNDRA--EGKVIARHESASLPVLIDEMVKDSDNLIADNLLKTIGRHYF 313 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 N PG++ G A++ +L+QQAG+D ++ADGSGLSR+N + +MQ+LQY+ H Sbjct: 314 NEPGSFDNGVAAIKAVLKQQAGIDFSAAVLADGSGLSRNNRMTTHHIMQILQYVYSHPEL 373 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 N ++ + ++G G+L+YR L + V KTGSL G +N+AG +T +G+ + FVQ Sbjct: 374 -NLMAAMAVSGKSGTLRYRYSLRTDELRNNVKGKTGSLFGTFNIAGVLTAKTGKDLLFVQ 432 Query: 444 YLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 ++ Y P R+ + + RFE +LY+ +Y NN Sbjct: 433 LVTNYH-HPDFHRHEKREIRRFERKLYQSLYSNN 465 >UniRef50_A5F933 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=45 Tax=Vibrionaceae RepID=A5F933_VIBC3 Length = 487 Score = 377 bits (969), Expect = e-103, Method: Composition-based stats. Identities = 169/484 (34%), Positives = 275/484 (56%), Gaps = 17/484 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQA-----ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQ 55 M F + L S F + + + T+LP GA +L+++ V ++ ++ Sbjct: 7 MLFRFIPVWLLSISGFLIASPIYAQTPLTAATTKLPQGARYSLLIEDVALQQNTLELNTH 66 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 PASTQK++TALAA ++LG FRF T L G D + RF DPTL D Sbjct: 67 LYYPPASTQKILTALAAKLELGDKFRFHTDLMRSGQ--------DWIIRFSGDPTLTTAD 118 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + ++ +K +I+G++ +D S+F+ +++A GWPW+ + C+SAP +A +D NC Sbjct: 119 LTTLLKAMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAPASAINLDANCIQ 178 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 S+Y+ P+ + V +YPV + SQ ++ + E+ C+L++ N +TL GCL Sbjct: 179 ASIYTEPQG--KTRVYVPEHYPVHVQSQAISVTQSEQESLLCDLELTATPENHYTLDGCL 236 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 R +PLPL FAVQD Y ++ L Q I G + + +AS S PL Sbjct: 237 ALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGKANTKQAQKIASHHSQPL 296 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 LLK ML++SDN+IADT+ + +GH ++ PG++ G+ A++QI + G+ + +T +AD Sbjct: 297 PVLLKTMLQESDNLIADTLTKALGHRFYSQPGSFTNGTQAIKQIFYSRTGISLEDTQLAD 356 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+N + P M++ L+Y+ QH+ EL I+MLP AG G+LQYR + + G++ Sbjct: 357 GSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRAPQISGQIK 416 Query: 416 AKTGSLQGVYNLAGFITTASGQRMA-FVQYLSGYAVEPADQRNRRI-PLVRFESRLYKDI 473 AK+GSL G YN+AGF+ + + FVQ+++ Y ++ P+++FE++LY+++ Sbjct: 417 AKSGSLYGTYNMAGFVMDENQRPKTLFVQFVTDYFPPRSNPEVAVEPPIIQFETQLYQEL 476 Query: 474 YQNN 477 Q N Sbjct: 477 IQFN 480 >UniRef50_B5FA68 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Vibrio fischeri RepID=B5FA68_VIBFM Length = 468 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 158/478 (33%), Positives = 263/478 (55%), Gaps = 19/478 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M F R+ + S I+FS A++ E ++ LP+G+ A+ V+ + ++ ++ P Sbjct: 1 MFFFRYSLIALSLISFSSI-ADIKETLSSLPSGSRAAITVENLQSNKIEFQQKQDELLPP 59 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST K++TAL A + LG +F FTTTL D+V F DP+L R+ + + Sbjct: 60 ASTLKIVTALVARLALGTEFTFTTTLYKADK--------DVVLTFSGDPSLSRKQLSEL- 110 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 S + I G++ ID SIF +++A GWPW+ + C+SAP +A +D NC S+ + Sbjct: 111 --FNDSELKTIQGDLWIDGSIFTGYERAVGWPWDILGVCYSAPSSALSIDENCVQASITT 168 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F+ + + P++ S +++ R ++ +C+L++ N + L GCL +R++ Sbjct: 169 HEDGSTRVFVPI--HQPISFSSYAKSVSREEQKSTFCDLELTTQG-NHYELNGCLVKRNK 225 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--PGTVVASKQSAPLHDL 298 PLPL FAVQD + + L + I +G + E V+A S PL +L Sbjct: 226 PLPLKFAVQDTRDFTKRTVSKILAEHNIKLNGEIRFGAPKTELTNLNVLAKHNSKPLMEL 285 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L MLKKSDN AD + +M+GH + PG++ G+ A++ IL +QA +D+ N ++ DGSG Sbjct: 286 LDHMLKKSDNHYADNLTKMLGHLNYQQPGSFTNGTAAIKDILLKQADIDLSNAVLVDGSG 345 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+N + M +LQ+I +++ EL I +LP +G DG+L+YR+ + + + G + +K+ Sbjct: 346 LSRNNRMTANQMKSILQFIHKYNKELGLIELLPTSGIDGTLKYRSSMRKEPIKGSMKSKS 405 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 GSL G YN+AGF+ + + FVQ+++ Y P + +P+ R K YQ Sbjct: 406 GSLFGSYNMAGFVGLENKEPQLFVQFVADY--HPVAAKEGAVPVERPIDTFEKSFYQE 461 >UniRef50_B2V8H3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Sulfurihydrogenibium RepID=B2V8H3_SULSY Length = 475 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 133/476 (27%), Positives = 228/476 (47%), Gaps = 22/476 (4%) Query: 1 MRFSRFIIGL---TSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQ 55 MR+ F++ L S + + + I + A + + ++ + Y+ + Sbjct: 1 MRYIIFLLLLIFSFSAYSSEILKYQFESIIRDINNENDAKVGIFIKSLSEDDFTYMYNYR 60 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 +PAS QK+IT ++A+ L PDF++ TTL T GNV+NG L G+L G DP+L QD Sbjct: 61 NPFIPASNQKLITTISAIANLSPDFKYRTTLATNGNVKNGTLYGNLYLIGGGDPSLTVQD 120 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + NMV LK+ G+N+++GN++ D S F+ GWP +D+ CF+A + V+ NC Sbjct: 121 LENMVKKLKEYGINRVEGNLIGDNSYFSEEGTGQGWPEDDLNYCFTARFSGLSVNENCLR 180 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 +S+ K G + + + + + E NR L G + Sbjct: 181 ISV--NIKNGKVYVSMNPLNNYYQIVNNIEFSKKAGNVILRVE-------GNRLILEGKV 231 Query: 236 PQ-RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 RS L + V + + ++L L + GI SG + + V+ QS P Sbjct: 232 SSKRSLNLEFSIPVNHPSIFTLSVLSKILDENGIKVSGKMYLGKAASYKYFVI--HQSKP 289 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L +L+K K S+N A+ +FR IG + V G+ A + A+ LR + V N I Sbjct: 290 LRELIKKANKDSNNFYAEQIFRTIGKEVYGV-GSTYASARAIIDTLR-KMHVATENIRIY 347 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKV 414 DGSGLS++N P +++VL YI + +F L ++G DG+L++R L+ + G++ Sbjct: 348 DGSGLSKYNYTTPEALVKVLDYIYKTPYFYDFFESLAISGVDGTLKHR--LNDQSLKGRI 405 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 AKTG ++ V NL+G++ ++G+ F ++ + + ++ Sbjct: 406 IAKTGYIKKVKNLSGYVKASNGEVFVFSILVNDL-KTTEIANKLQEKICSILAQYP 460 >UniRef50_C6WTM3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WTM3_METML Length = 477 Score = 374 bits (960), Expect = e-102, Method: Composition-based stats. Identities = 106/485 (21%), Positives = 220/485 (45%), Gaps = 25/485 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQM 57 +F ++ + + A + + + A + ++++ VQ V + P + +++ + Sbjct: 1 MKKFTFIVSLMLLSGLAHAELPKTVAAELAQSGVPASDVSIYVQAVDSRVPILSHYADKS 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAS K++T AAL L P +R+ T L G +++GVL G+L+ + DP+ K QD Sbjct: 61 MNPASVMKMVTTNAALDLLTPAYRWKTELYQDGLIKDGVLNGNLIIKGYGDPSFKVQDFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++ +LK++GV +I+G++LID S FA ++ + ++A P+A V+ S Sbjct: 121 RLLMSLKQAGVEKINGDLLIDKSYFADDVDNGVSFDDEKWRAYNAKPSAFSVNGRSTSFR 180 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR--------- 228 + + V + + ++ + + + ++ Sbjct: 181 FLANEIGVSVNQEFELPE--VAIVNHMKRVDGDCGNWRGRMSYDIQPYGSQSVGTQNKAA 238 Query: 229 ---FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 + G + ++ D YA K ++ G ++ G L+ V Sbjct: 239 KAVVSFKGIYAADCGERYIELSLFDDTQYAFFTFKKLWRELGGSFDGK-LKLQPVPANAK 297 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 + + S PL +++ + K S+N++A + +G + P T + G+ A++ L G Sbjct: 298 KLLEQASEPLGTVVRDINKWSNNLMARQLLLTLGAEKSGAPATMQKGAAAIQDWLSTN-G 356 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 + +I +GSGLSR I+ + ++L +++ +P+ DG++++R L Sbjct: 357 LSFKGLVIENGSGLSRVERISAEHLGKMLVRAYLSPVMPEYMASMPILSLDGTVKHR--L 414 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 ++ V+G+ KTGS+ GV ++AG++ +ASG R V ++ + R+ + LV + Sbjct: 415 EESAVNGRAHLKTGSINGVSSIAGYVLSASGHRYVMVMLVNHPNAGAS--RDAQDALVEW 472 Query: 466 ESRLY 470 RL Sbjct: 473 VHRLP 477 >UniRef50_P39844 D-alanyl-D-alanine carboxypeptidase dacC n=9 Tax=Bacillus RepID=DACC_BACSU Length = 491 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 125/474 (26%), Positives = 210/474 (44%), Gaps = 23/474 (4%) Query: 9 GLTSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 + + +D+ + PA GA + V+ A ++ PAS+ K+ Sbjct: 26 AALAAEKQDALSGQIDKILADHPALEGAMAGITVRSAETGAVLYEHSGDTRMRPASSLKL 85 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 +TA AAL LG ++ FTT + T G ++ L G+L + DPTL D M LK S Sbjct: 86 LTAAAALSVLGENYSFTTEVRTDGTLKGKKLNGNLYLKGKGDPTLLPSDFDKMAEILKHS 145 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAI------VDRNCFSVSLYS 180 GV I GN++ D + +P PW+D + AP +A D V + Sbjct: 146 GVKVIKGNLIGDDTWHDDMRLSPDMPWSDEYTYYGAPISALTASPNEDYDAGTVIVEVTP 205 Query: 181 APKPG-DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 K G + A +T+ + +T GS + E + N T+ G +P + Sbjct: 206 NQKEGEEPAVSVSPKTDYITIKNDAKTTAAGSEKDLTIERE---HGTNTITIEGSVPVDA 262 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 +V + A YA + K LK+ GIT G + + V+ S +S PL L Sbjct: 263 NKTKEWISVWEPAGYALDLFKQSLKKQGITVKGDIKT-GEAPSSSDVLLSHRSMPLSKLF 321 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 +K S+N A+ + + +G + G+W G + + L + GVD + ++ DGSG+ Sbjct: 322 VPFMKLSNNGHAEVLVKEMGKVKKG-EGSWEKGLEVLNSTLPE-FGVDSKSLVLRDGSGI 379 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKV 414 S + ++ + Q+L I +++ LP+AG G+L+ R + GKV Sbjct: 380 SHIDAVSSDQLSQLLYDIQDQSWFSAYLNSLPVAGNPDRMVGGTLRNR--MKGTPAQGKV 437 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 AKTGSL V +L+G+ T SG+++ F L+G ++ D ++ + + Sbjct: 438 RAKTGSLSTVSSLSGYAETKSGKKLVFSILLNGL-IDEEDGKDIEDQIAVILAN 490 >UniRef50_Q0AJG3 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Nitrosomonas RepID=Q0AJG3_NITEC Length = 475 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 101/475 (21%), Positives = 204/475 (42%), Gaps = 16/475 (3%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQM 57 + L + F A ++ + + Q A + + V++VGA P + ++ Sbjct: 4 LLKITWLLWGALTFPAYAVDLPDTVRQALKKTGIPEAAVGIYVREVGAERPLVSVNADVP 63 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAS KV+T A L LGP + + T + GN+ENG L+GDL+ + DP+L ++ Sbjct: 64 MNPASVMKVVTTYAGLEMLGPSYTWRTKVYANGNLENGRLQGDLIIKGYGDPSLNLENFW 123 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++ L++SG+ I G++++D S ++ + PG + ++ P A +V+ + ++ Sbjct: 124 LLLRQLRQSGLKDISGDLVLDYSYYSFPTENPGAFDGKRYKTYNVAPEALLVNYHTSTLH 183 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR---GSAEAQYCELDVVPGDLNRFTLTGC 234 L+ + G + + + + ++ + S DV L G Sbjct: 184 LFPESQHGGVRVTADPESQLLNVQNHLKLTQKKCSTSGVRVNIRDDVPRPGHVTVMLEGD 243 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 ++ + ++Y + KQ T++G++ R ++ ++ S P Sbjct: 244 YSAHCGQTAYYLSLHESSTYIHQLFSGLWKQLDGTFNGSV-RHGVTSKTLNPISVYHSPP 302 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHAR--FNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L ++++ + K S+N+ A +F +G + +RQ L + +D + Sbjct: 303 LAEVIRGINKFSNNVAAKQLFLSLGETESNGGEFVSPNLARSGIRQWLFSK-NMDFPELV 361 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 + +GSGLSR I+ + +L F++ L + G DG+ + R L ++ V Sbjct: 362 LENGSGLSRIERISARHLNDLLNAAYFSPTMPEFMASLAVVGVDGTARKR--LKKSVVAQ 419 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 K KTG+L+ V +AG++ +R V ++ A R L+ + Sbjct: 420 KAHIKTGTLKDVSAIAGYVLNHKKKRYVIVFIVNHPKSGGA--RVAMDALLEWLY 472 >UniRef50_Q10X51 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Cyanobacteria RepID=Q10X51_TRIEI Length = 487 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 108/466 (23%), Positives = 200/466 (42%), Gaps = 24/466 (5%) Query: 14 IAFSVQAANVDEYITQLPAG-ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I ++ I + + ++V+ + ++ PAST K++T A Sbjct: 32 ICPIELNNAINSIINRPIFNRSRWGILVETLSGKRKIYSRDAEYYFTPASTAKLLTTAAV 91 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L +L P+FR T++ G G++ DP+L ++++ LK+ G+ I+ Sbjct: 92 LKELKPNFRIRTSIYGDGK-------GNIYIVGRGDPSLAETQLKSLAEQLKEGGIENIN 144 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK--PGDMAFI 190 ++ D + F W W D+ + AP + I ++N + L P + F+ Sbjct: 145 -QLISDDTYFQGMAVNSNWEWEDVQAGYGAPINSLIFNQNAIDLVLSPQGNGQPLKVTFV 203 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 A + + T+ E D + ++G L S P+ AV + Sbjct: 204 NPAESKKWQIENNSVTVATNKKEFVEVGRDFIQP---IIRISGQLRIGSASEPVYVAVVE 260 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNE-PGTVVASKQSAPLHDLLKIMLKKSDNM 309 A + L+ GI+ S + + T +A +S + +L++ + KKS+N+ Sbjct: 261 PADNFLNNFRRVLELEGISVSRIVKSSQITSNLNLTELAFVESPTVGELIEEVNKKSNNV 320 Query: 310 IADTVFRMIGHARFNVPG------TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 A+ + R +G VP T + V+ IL + GV + + DGSGLSRHN Sbjct: 321 YAEALLRQLGVRSKLVPNKKSDYQTLAKSLEEVKVILT-RLGVTPNSFRLNDGSGLSRHN 379 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 L++P ++Q L+ +A + + LP+AG G+L R + G + AKTG++ G Sbjct: 380 LVSPEALVQTLRIMANSPWANAYRNSLPIAGVSGTLSRR--FINSFATGNIQAKTGTISG 437 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 V LAG++ + + + F ++ +E RN +V ++L Sbjct: 438 VSGLAGYVQPINFEPLVFSVIVNQSDLETKYLRNAIDEIVLLFTQL 483 >UniRef50_Q47J01 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=2 Tax=Betaproteobacteria RepID=Q47J01_DECAR Length = 479 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 105/476 (22%), Positives = 209/476 (43%), Gaps = 18/476 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGAN-----LALMVQKVGASAPAIDYHSQ 55 M R + + I+ + A + + A +A+++Q V + +P + +++ Sbjct: 1 MFIKRLAPLILAGISLAALADGLPPSVLGALKAAQIPAKNVAVVIQAVDSGSPLVAHNAS 60 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 Q PAS K++T AAL LGP + + TT+ T+ +G+L G+L + DP + Sbjct: 61 QAMNPASVMKLVTTYAALDLLGPAYTWKTTVWTESAPVDGILSGNLYIKGSGDPRFAIEH 120 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + +++ L+ G+ QI G+V++D + F PG + + ++ P +++ Sbjct: 121 LWSLLRQLQVRGIRQIAGDVVLDRTAFNVPSIDPGAFDDKPMRPYNVGPDGLLLNFRSLR 180 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVV---PGDLNRFTLT 232 +L G + + + +Q+R ++V NR T Sbjct: 181 FTLVPDN--GKPRVLMETPSEGLRVDNQLRAGNGDCGSNWKDLINVRLIPENSGNRLEFT 238 Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 G PL + + A +++ K+ G +G + R V ++A +S Sbjct: 239 GTYSALCGEKPLNLSPLPADAQADGLIRALWKELGGNLNGQV-RGGTVPIGAKLLAQHES 297 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 APL D ++ + K S+N++A VF +G + P T + L + + G + Sbjct: 298 APLADAVRDINKFSNNVMARQVFLTLG--NDSAPATAERSKQRISDWLAAR-NLRFGELV 354 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 + +GSGLSR I+ ++ ++L ++ F+S +P+ G DG+++ R L+ + G Sbjct: 355 LDNGSGLSRVERISADSLNRLLLDAWKNPVMPEFVSSMPIVGIDGTMKKR--LNSSEATG 412 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 + KTG+L GV +G+ A G+R AF ++ + L+ + ++ Sbjct: 413 RAHIKTGTLDGVKAASGYALDALGRRYAFTFLINHPKAQAGS--AAIDALLVWVAQ 466 >UniRef50_C6P2C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sideroxydans lithotrophicus ES-1 RepID=C6P2C7_9PROT Length = 494 Score = 371 bits (953), Expect = e-101, Method: Composition-based stats. Identities = 112/500 (22%), Positives = 211/500 (42%), Gaps = 41/500 (8%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQM 57 R L C+A +V AA++ + Q A++ A+ V++VG AP I ++Q+ Sbjct: 1 MKRPYAALLLCLAVNVHAASLPATVVQELKNAHIPRSGIAVEVREVGKHAPLISINAQRP 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAST K++T ++L LGP + + T G +++GVL G+L+ + DP + Sbjct: 61 MNPASTMKLLTTYSSLDLLGPAYTWKTEAWIDGELKDGVLDGNLILKGYGDPKFTIEQFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 ++ L+ G+ +I G++++D S F PG D + ++ P A +++ N + Sbjct: 121 LWLSELRARGLREIRGDLILDRSYFDLPPYDPGAFDADPVRAYNVGPDALLLNFNTLRLR 180 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + +T+ +Q+ + +L V + L G P Sbjct: 181 YMPDGIGLK--VVTEPPLDGMTLHNQLTPNNEKVNCDNWDDLFQVQPQGDSVVLQGDYPM 238 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 +V Y GA+ K+ G T G R V + ++ +S PL Sbjct: 239 GCGEREQNLSVMPHTRYVGAVFSAVWKELGGTLQGKE-RDGVVGTGAKLFSTHRSEPLSS 297 Query: 298 LLKIMLKKSDNMIADTVFRMIGHA----------RFNVPGTWRAGSDA------------ 335 +++ + K S+N++A +F +G N P + A + A Sbjct: 298 IIRDINKYSNNVMARQLFLTLGETVPVAKDNEPPTENEPASGVAATQASFPENEEWTGRM 357 Query: 336 -------VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 Q+ + + ++ +G+GLSR+ I+ A+M ++LQ + Sbjct: 358 SIERSVLAMQLWLARNHLHFPELVLENGAGLSRNERISVASMDKLLQLAYDDPLSAELQA 417 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY 448 LP+ G DGS++ R L + KTG+L+GV +AG++ + SG+ V Y++ Sbjct: 418 SLPILGVDGSVRRR--LKDSPAASHAHLKTGTLEGVKTIAGYVRSKSGREWIVVFYINHP 475 Query: 449 AVEPADQRNRRIPLVRFESR 468 + + L+ + +R Sbjct: 476 YAKAGQ--GAQDALIEWVAR 493 >UniRef50_Q8ELS3 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Oceanobacillus iheyensis RepID=Q8ELS3_OCEIH Length = 508 Score = 371 bits (952), Expect = e-101, Method: Composition-based stats. Identities = 108/445 (24%), Positives = 193/445 (43%), Gaps = 19/445 (4%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 G + V + PAS KV+TA++AL LGPD RFTT + T G Sbjct: 63 LEGGITGVSVMDAANGDQLFSRNIDIRLHPASNMKVLTAVSALETLGPDHRFTTEVLTDG 122 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + VL GD+ + DPTL + D+ LKK G+++I G+++ D + + + Sbjct: 123 KIRGKVLHGDVYVKGKGDPTLLQSDLEAFAKELKKQGIHKIKGDLVGDDTWYDDVRLSQD 182 Query: 151 WPWNDMTQCFSAPPAAAI------VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQV 204 W+D A +A D V + + +++ ++ Sbjct: 183 LNWSDEPFFTGAQVSALTMSPDDDYDAGTVIVEVRPSENGKKAEVTLTPENNYISIENKT 242 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 + + G + E N + G +P+ +V + +Y ++ + L+ Sbjct: 243 KMVANGEEKDISIE---RQHGNNTIVIEGEMPKDGSLSRSWASVWEPTNYVISVFRQTLE 299 Query: 265 QAGITWSGTLL-RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 + GIT+ G R + + +K+S PL +LL +K S+N +T+ + +G Sbjct: 300 EEGITFIGKSKDRFEETPSSAEIRVAKESMPLKELLIPFMKLSNNGHGETLVKEMG-KVV 358 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+W G + +L + G+++ ++ DGSG+S N I + ++L I + + Sbjct: 359 EDDGSWDEGLVVMEDVLGE-LGLNMDTILLRDGSGMSHKNFIPAVELSELLYVIQEKEWF 417 Query: 384 LNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 +F S LPLAG G+L+ R + + AKTGS+ GV L+G++TTA G+ Sbjct: 418 PSFQSALPLAGHPERMVGGTLRNR--MTNSPATENAMAKTGSITGVSTLSGYVTTADGKE 475 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLV 463 + F ++ Y + R +V Sbjct: 476 VVFSILINNYLGSSSTMRGIEDSIV 500 >UniRef50_B7VJI8 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Vibrionales RepID=B7VJI8_VIBSL Length = 477 Score = 370 bits (951), Expect = e-101, Method: Composition-based stats. Identities = 154/455 (33%), Positives = 263/455 (57%), Gaps = 13/455 (2%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 + +LP G++ +L+++ + + ++ +S PAST K++TALAA ++LG +F +TT+ Sbjct: 26 PLDKLPDGSSTSLILKSLSDDSSELNTNSDGFYPPASTLKLVTALAAKLELGDNFNYTTS 85 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 + D+V F DPTL+R+ ++N++ KS I GN+ +D S F + Sbjct: 86 IARS--------NKDVVIAFSGDPTLQREHLKNLLDQYAKSQSKTIKGNLYLDNSAFTGY 137 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 +A GWPW+ + C+SAP +A +D NC S+Y+ + + ++YP+ + + Sbjct: 138 QRAVGWPWDILGVCYSAPSSAMTLDSNCAQASIYTKDNG--TTRVYIPAHYPIDVTTTAT 195 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T+ R +A C+L+++ N + L+GCL +R +PLPL FA+Q Y ++ LK+ Sbjct: 196 TVTRSGQKATQCDLELITTPDNTYKLSGCLVERKKPLPLKFAIQSPELYTVQVVTSILKE 255 Query: 266 AGITWSGTLLRQTQVNEP-GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 I G ++ + T++AS S L +L+ IMLKKSDN+IAD + + +G + Sbjct: 256 LRIEVKGNVVVGKKAKSGKSTLIASHSSEKLPELINIMLKKSDNLIADNLTKTLGATFYV 315 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 PG++ G++A++QIL +A +D+ + DGSGLSR+N + TM QVL+YI ++D +L Sbjct: 316 QPGSFNNGTEAIKQILLTKANIDLSQAQLVDGSGLSRNNRMTSQTMAQVLRYIWENDKQL 375 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQ 443 N I +P +G DG+L+YR + +A + G + AK+GSL G YN+AGF +G+ FVQ Sbjct: 376 NLIEAMPTSGTDGTLKYRQSMRKAPIQGNIIAKSGSLYGSYNMAGFGLDKAGKPNSLFVQ 435 Query: 444 YLSGY-AVEPADQRNRRIPLVRFESRLYKDIYQNN 477 ++ Y P ++ P+ +FE Y D+ + + Sbjct: 436 FVRDYFPDTPDPEKPVEAPITQFERAFYTDVVEFS 470 >UniRef50_UPI0001C16732 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Nostocaceae RepID=UPI0001C16732 Length = 504 Score = 370 bits (950), Expect = e-101, Method: Composition-based stats. Identities = 100/465 (21%), Positives = 200/465 (43%), Gaps = 23/465 (4%) Query: 15 AFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 S +++++ I ++++ + + +Q+ +PAST K++TA AA Sbjct: 54 CASQIPSSIEKIINSPTFERMRWGILIKNLSSDQILYSRDAQKYFIPASTTKILTAAAAW 113 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 +LG DFR T++ +G+ DP+ + + L++ G+ I+ Sbjct: 114 QKLGKDFRIRTSIHQGD-------EGNFYLVGRGDPSFNNAQLTALAQKLQQRGIRSIN- 165 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 +++D S F W W D+ + AP + +V+ N ++L + Sbjct: 166 KLIVDDSYFQGEYIDASWQWEDIQADYGAPVNSLMVNENTGILTLSPNKIGEKLNITWSN 225 Query: 194 SYYPVT-MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 + + + T+ E+++ ++ + G LP S + +V D Sbjct: 226 DMELYSGIENNSITVA--ENESRFFQVTRDLKG-QVLKIDGKLPINSPSQTIGLSVIDPI 282 Query: 253 SYAGAILKDELKQAGITWSGTLLR----QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 L+ + GI ++ E +A +S L DLLK + + S+N Sbjct: 283 DNFLKNLRLTWAKVGINVKEIQPIFEYQHYKIAEQKPEIAVVESLTLPDLLKEVNRNSNN 342 Query: 309 MIADTVFRMIGHARF--NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 + A+++ R +G++ T G ++ L + G++ +I DGSGLSR NLI+ Sbjct: 343 LYAESLLRHLGNSESTNKNETTVNQGLKILKTTLSE-WGIEPNTYMIVDGSGLSRKNLIS 401 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P +++ LQ +A+ + F + L G +G+L+ R + G V KTGS+ GV + Sbjct: 402 PEALVKTLQVMAKSPDGNLFRASLATGGMNGTLKNR--FLKTPAWGIVQGKTGSMTGVIS 459 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 L+G+I + + F ++ + P+ R ++ ++L+K Sbjct: 460 LSGYINVPNYDDLVFSMIVNQ-SQHPSAVRKAMDEIIILLAKLHK 503 >UniRef50_B4AVY5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AVY5_9CHRO Length = 492 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 105/468 (22%), Positives = 202/468 (43%), Gaps = 19/468 (4%) Query: 8 IGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 + I + ++E IT+ + ++++ + Q+ + AS K+ Sbjct: 39 VATAEPICPANLREAIEEVITRPEWRRSRWGILIKTLKDGKRLYGLDEQKYFVAASNVKL 98 Query: 67 ITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 +T AAL +LG DFR T++ G DL DP+L ++ + LK+ Sbjct: 99 LTTAAALRELGADFRIRTSVYAVGKPPRL---KDLRVVGRGDPSLTTAQLKLLAQQLKQK 155 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA--PKP 184 G+ I+ +++D S F P W W+D+ + + I++ N ++ L +P Sbjct: 156 GIRYIE-QLIVDDSYFKELPLNPSWEWSDLVFNIAPSVNSLILNENAATIKLIPQQVDEP 214 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + ++ + + ++ T P+G+ D +TG L E Sbjct: 215 TQLEWLDSVAARQWQVENESITGPKGTKNTIDFNRSFTQLD---LKITGQLAVDQEADTT 271 Query: 245 AFAVQDGASYAGAILKDELKQAGITWS-GTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 A+ D A Y + L + GI + T+++ + E G +A +S PL L+ Sbjct: 272 TIAIPDPARYFLESFRQVLLEEGIEINQATIVKDSSAAEEGKELAFVESPPLIMLVDKAN 331 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 +S+N+ A+ + +++ + A D ++Q L GV+ + + DGSGLSR N Sbjct: 332 TESNNLYAEAIAKILATQSRDK-----AAVDVIKQSLID-LGVEADSFKLVDGSGLSRQN 385 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 L++P +++ L+ +A+ + + L + G+LQ R V G + KTG+L G Sbjct: 386 LVSPEAIVETLELMAESLQGEIYRNSLAVGAEKGTLQGR--FIDTAVAGNLQGKTGTLTG 443 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 V L+G++ + Q + F ++ + R +V F S L++ Sbjct: 444 VSALSGYLNVPNYQPLVFSIIVNSTDQSSINVRKAIDEIVIFSSGLHR 491 >UniRef50_Q1II05 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=2 Tax=Bacteria RepID=Q1II05_ACIBL Length = 518 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 128/506 (25%), Positives = 214/506 (42%), Gaps = 53/506 (10%) Query: 6 FIIGLTSCIAFSV--QAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPAS 62 F + L + A + ++ +D ++ + A + + + +S ++ PAS Sbjct: 11 FFLVLIALYAPAADKLSSKIDRVLSAPDVSRAFWGIEIVSLDNGKTLYSRNSDKLFTPAS 70 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKR-------- 113 K+ T A LGPDFRF TT+ET G V + G L DLV DP L Sbjct: 71 NTKLFTTSTAFALLGPDFRFHTTVETSGTVDKRGRLDSDLVIVGRGDPNLSGRTLPYNLR 130 Query: 114 --------QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 + N+ L + GV +DG+++ D S +A GW +D+ + AP + Sbjct: 131 TERKQPPIAALENLADQLVQKGVRYVDGDIVADDSYYAFERYGEGWAQDDLVWEWGAPVS 190 Query: 166 AAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPG 224 A V+ N VS+ A + G+ AF+ + + + ++V T P+G+ + Sbjct: 191 ALTVNDNVIFVSIQPADRVGERAFVDITPFPAYYRVDNRVMTTPQGTGPRKIY--INREP 248 Query: 225 DLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW-------------- 270 N+ TL G +P + A A++D A + + ++ L + G+T Sbjct: 249 GSNQLTLWGNIPVDDQGANEALAIEDPADFTAKLFRELLDKRGVTVYGRPKTKHTELASL 308 Query: 271 ------------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 G V+ V+ S PL LK++ K S N+ A+ + R++ Sbjct: 309 STFSITATASAGGGADRAPAPVSRLPLVLGQYDSQPLSADLKVINKVSQNLHAELLLRLL 368 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 G GT G + R L A + + DGSGLSR +L P +++L Y Sbjct: 369 G-KEKGTAGTIEGGLEVERAFLAS-ADIRPEEYTLYDGSGLSRQDLATPHAFVKLLTYAH 426 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + F LP+AG DGSL R ++ +V AKTGSL V +L+G++TT G+ Sbjct: 427 KQPWGATFEDTLPVAGVDGSLVER--FTKSTAQSRVHAKTGSLDHVNSLSGYLTTEKGEH 484 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLVR 464 + F + + + +V+ Sbjct: 485 VVFSILSNNHNLTNKHAIETIDAIVQ 510 >UniRef50_Q3MFE3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=4 Tax=Nostocaceae RepID=Q3MFE3_ANAVT Length = 487 Score = 368 bits (944), Expect = e-100, Method: Composition-based stats. Identities = 107/462 (23%), Positives = 184/462 (39%), Gaps = 21/462 (4%) Query: 13 CIAFSVQAANVDEYITQLPAG-ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 I +D + + ++V+ + + +Q+ PAS K++T A Sbjct: 39 SICPGELGTAIDTIVNRPLFNRVRWGILVKPLSSVQTLYSRDAQKYFTPASNAKLLTTAA 98 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 AL QLG DFR T++ G+ DP+L ++ + LK+ G+ QI Sbjct: 99 ALQQLGADFRIRTSIYENA-------NGNFTIVGRGDPSLSDTQLQALAEQLKQKGITQI 151 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 ++ D + W W D+ + AP + I+++N F + L Sbjct: 152 R-QLIADDTYVQGDIVNSTWQWEDVQSDYGAPVNSFILNQNVFGLKLTPQTVGKTPQLSW 210 Query: 192 VASY--YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + ++ T+ D+ + G + S P V Sbjct: 211 NDPNEGRQWLVINKSVTVAANQPSYIEVTRDLT---GKVLRIQGQVAANSTPYLAELPVV 267 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 D Y L+ A I TL+ + VA+ QS PL LL + S+N+ Sbjct: 268 DPNYYFLRRLRTIFTTAKINLGTTLVASST--NNQQEVAAVQSPPLSQLLFETNQNSNNL 325 Query: 310 IADTVFRMIGHA--RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 A+ + R + R T G D ++ L + GVD ++ D SGLSR NL+ P Sbjct: 326 YAEALLRALAFKQPRVQNKSTANIGLDVIKVTL-DKLGVDPTGYVLIDASGLSRRNLVTP 384 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++Q LQ IA+ + + LP+AG G+L R L +G V AKTG+L G +L Sbjct: 385 EALVQTLQGIAKTPAANVYRASLPIAGKSGTLSNR--LRNTPAEGIVQAKTGTLSGAISL 442 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +G++ + + +AF ++ + R +V +++ Sbjct: 443 SGYVNSPQYEPLAFSIMVNQSEQPASALRQAIDEIVVLLAQI 484 >UniRef50_C4LB78 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Tolumonas auensis DSM 9187 RepID=C4LB78_TOLAT Length = 484 Score = 367 bits (943), Expect = e-100, Method: Composition-based stats. Identities = 185/477 (38%), Positives = 280/477 (58%), Gaps = 10/477 (2%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKV 66 I I SV + +P G+ +AL ++ G+ + YH +PASTQK+ Sbjct: 4 FISSAFAIFLSVLTVCSAQAAISVPEGSRIALAFKEPGSDSV-AAYHGDTFMIPASTQKL 62 Query: 67 ITALAALIQLGPDFRFTTTLET-KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK 125 +TALAA + GPD++F T + KG ++NGVL GDLV F P L RQ + N++A LK+ Sbjct: 63 LTALAASLYFGPDWQFKTRMLAPKGAIQNGVLNGDLVLEFDGAPDLTRQALVNLLAYLKQ 122 Query: 126 SGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG 185 V QI+G++L+D S + +D GW WND+ CF+AP +A ++DRNC L A + G Sbjct: 123 QKVTQINGDILLDVSGYGGYDHGDGWSWNDLPICFTAPASAVVIDRNCVFAQLK-ANQLG 181 Query: 186 DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE-PLPL 244 +A + + P+T+ S+ R + + C+L V N + LTGC+PQ+S P PL Sbjct: 182 AIAEPIIPAGQPITITSEARVVTQ-QEYYSGCDLRVDMNSSNNYHLTGCIPQQSGKPWPL 240 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 +FA+ D ++ ++ ++A I +G + + + +A SAPL LL MLK Sbjct: 241 SFAITDPTAWGVELVSWAARRADINLTGQVKAVRHIPDNLVELAHVPSAPLKKLLDRMLK 300 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +SDN+IAD++ R +GH ++ AG+DAVR IL+ +AG+D+G+ ++ADGSGLS HNL Sbjct: 301 RSDNLIADSLSRALGHYYLKRAASYAAGADAVRGILKNKAGIDLGSALLADGSGLSAHNL 360 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I M++VL Y+A HD+EL I +LP+AG G+L R + + V+AKTG+LQ V Sbjct: 361 ITAKQMLEVLDYMALHDDELKLIGLLPVAGMSGTLGSRGSVQNPPLVKNVTAKTGTLQNV 420 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI-----PLVRFESRLYKDIYQN 476 NLAGFITTASG+R AFV +G P+ ++ + P +FE ++ + IY+ Sbjct: 421 SNLAGFITTASGKRKAFVLMANGLTFPPSVRQALKAHRIASPHYKFERQILEQIYRE 477 >UniRef50_A6F7V3 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Moritella sp. PE36 RepID=A6F7V3_9GAMM Length = 464 Score = 367 bits (942), Expect = e-100, Method: Composition-based stats. Identities = 163/469 (34%), Positives = 268/469 (57%), Gaps = 14/469 (2%) Query: 16 FSVQAANVDEYITQLPAGANLALMV------QKVGASAPAIDYHSQQMALPASTQKVITA 69 + A+ + LP+G N+A ++ + + ++++ + PASTQK++TA Sbjct: 1 MNTHASEIAPLEKLLPSGTNVAYIIGQPFTATEKVSHNAISQHNAELLLTPASTQKLLTA 60 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 L A + L ++ F T+L G++ + ++ F DPT R D+R+M+ LK SG+ Sbjct: 61 LTAKLYLTDEYIFNTSLH--GSISKQSIS-EMEFNFTGDPTFSRDDLRDMLKRLKASGIT 117 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 +I G++ ++ S F ++ G WND C++ +A +++ NC +L + A Sbjct: 118 KISGDITLNQSRFNGYNWGNGQVWNDQAVCYATQASALVINNNCVLGNLRRSAD-LKKAT 176 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 I + Y P+ + SQV + + +AQ+C+L+V+ N +TL GC+ LPL+FA+ Sbjct: 177 IYIPEYEPIILTSQVDIISKEQQQAQFCDLEVIRHPNNNYTLFGCITPSKRNLPLSFAIS 236 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 D SY A+L EL QA I ++G ++ + V+ + QS PL D++ M+K+SDN+ Sbjct: 237 DPVSYFTALLNAELAQANIEFTGNVVESFKT-VNTAVIVNHQSPPLADIITEMMKESDNL 295 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 IAD +F+ IG F PG +R G+ A+R+IL + G+ + + +IADGSGLSRHNL++ T Sbjct: 296 IADILFKTIGAEYFQQPGNYRNGAKAMREILADE-GLSLASNVIADGSGLSRHNLVSAQT 354 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M VL+YI HD+EL + +P++G DG+LQYR GL + GKV AKTGSL+G+ NL G Sbjct: 355 MFNVLEYIISHDDELQLLKTMPISGVDGTLQYRRGLLTKKLTGKVVAKTGSLKGLSNLVG 414 Query: 430 FITTASGQRMAFVQYLSGYAVEP--ADQRNRRIPLVRFESRLYKDIYQN 476 + T + FV +SGY +P AD+ + PL ++ + + I + Sbjct: 415 IVKTEKNHMVPFVLMVSGYNPQPRDADKPKQPSPLTQYSAAFFNTIVSH 463 >UniRef50_Q2S1R5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S1R5_SALRD Length = 498 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 123/473 (26%), Positives = 206/473 (43%), Gaps = 32/473 (6%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 +++ D GA + V + ++ + PAS K++TA AAL +LG Sbjct: 25 IRSVVTDTIEAAPYTGALWGIEVTNLETGERLFQHNPDHLFTPASNAKLLTAAAALRRLG 84 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK--------RQDIRNMVATLKKSGVN 129 P +R+ T L G V NGVL+G+L+ R DPTL R+ +L+ +G+ Sbjct: 85 PSYRYNTRLYVDGPVRNGVLRGNLIVRGSGDPTLGGYAQRDDPTAVFRDWADSLRAAGIT 144 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 +I+G++L D + F+ GW WND+ ++A + + N + + Sbjct: 145 RIEGDILGDDNPFSDVPLGDGWSWNDVPYAYAAEINGLVFNGNTIDLEVRGRQVGAPGRV 204 Query: 190 IRVA-SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 V + +Q RT+PR S + E P N FT+ + E + Sbjct: 205 TWSPFETDFVRVRNQSRTVPRDSTSDEDYE---RPFSENTFTVRSRIHPN-EVQEETLTI 260 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVN-------EPGTVVASKQSAPLHDLLKI 301 + Y L+ L + GI+ G + V + +S PL ++++ Sbjct: 261 TEPTKYFTHTLRSVLLREGISVGGQGRDVDDSPLTPRYEADSVRRVGTYRSPPLREVVQT 320 Query: 302 MLKKSDNMIADTVFRMIGH-------ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 M +S N+ A+ + R + A G+ G+ AVR L + G+D + Sbjct: 321 MNHESQNLYAEQLLRTLAVVGPPDTTADDLTEGSAALGALAVRTELSE-VGIDTSRVRVV 379 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQ---HDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 DGSGLSR N + P M ++L ++ D F LP+ G +G+L+YR A Sbjct: 380 DGSGLSRKNYVRPRAMTRLLVHMWSEAPSDRRAAFYDSLPMGGREGTLEYRF-PRGAAAR 438 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G+V AKTG+L G L+G++ T G +AFV + + + + D R + +V Sbjct: 439 GEVRAKTGTLTGASALSGYVRTPRGTPLAFVIFCNHHLADAEDVRAAQDAIVN 491 >UniRef50_A6SVJ3 D-alanyl-D-alanine carboxypeptidase (Pbp4, peptidase family s13) n=2 Tax=Oxalobacteraceae RepID=A6SVJ3_JANMA Length = 475 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 110/477 (23%), Positives = 194/477 (40%), Gaps = 17/477 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN------VDEYITQLPAGANLALMVQKVGASAPAIDYHS 54 + S +I + F+ AA + + + VQ+V P I + Sbjct: 7 LPLSLALIFSFTVAPFAAYAAEGLPTVVSEALKRSAIPQSAVGTYVQEVSGQKPWIAVNE 66 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 PAST K++T+ AAL LGP F + T G + VL GDL+ + DP L + Sbjct: 67 TTGFNPASTMKLVTSDAALELLGPTFNWKTQAYMTGTLNGDVLDGDLIIKGSGDPKLVTE 126 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 + + ++ +G+ +I GN+++D SIF D + ++A P A +++ F Sbjct: 127 NFWQFLRKIRAAGIREIRGNLILDRSIFEDMPYDAAQFDGDPLKPYNAGPDALLLNYKVF 186 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 + + + + T G+ +L G ++ TG Sbjct: 187 AFHFLPNVARNQVDITIDPPVATYPVMAPALT--NGACGDWQGKLLPNMGRVST-NFTGS 243 Query: 235 LPQRSEPLPLA--FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 + + + Y G + + G ++G + V V QS Sbjct: 244 YSAACGEKTWYLHPYLMNHSEYFGVVFRQLWNDVGGVFNGAVN-NGMVPPAARFVTEWQS 302 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L ++++ + K S+N++A + + VP + G+ V+ L + G+D + Sbjct: 303 TSLPEVIRDINKYSNNVMARQLLLTVAADVLKVPASPERGARVVKTWLANK-GMDTSQVV 361 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 I +GSGLSR I M ++L Q F+S LPL GYDG+++ R L + V G Sbjct: 362 IENGSGLSRTERIPVGVMGRMLVSTFQSPTMPEFMSSLPLVGYDGTMRKR--LTKQTVAG 419 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + KTG+L V +AG++ ASG+R A V ++ L+++ Sbjct: 420 RAHIKTGTLNDVRAIAGYVLAASGKRYAVVCIINHPNAVGGQ--AAHDALLQWIYEN 474 >UniRef50_C8N7B3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7B3_9GAMM Length = 470 Score = 367 bits (941), Expect = e-100, Method: Composition-based stats. Identities = 108/479 (22%), Positives = 207/479 (43%), Gaps = 21/479 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQ 55 MR F+ L S QA + +T++ A ++++ VQ + A P +D + + Sbjct: 1 MRIGFFL--LCSWFCLLAQAQQLPAAVTEMLNKNKVAPEDVSIWVQGIEAEVPLVDLNGK 58 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKG-NVENGVLKGDLVARFGADPTLKRQ 114 Q+ PAS +KV+T + LI+LG DFR+ T NGV+ G+L G DP L + Sbjct: 59 QLRHPASVEKVLTTASGLIRLGADFRWETKFYVDSLPDANGVVDGNLYVVGGGDPFLVEE 118 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIF--ASHDKAPGWPWNDMTQCFSAPPAAAIVDRN 172 + M+ L+++GV I G++++D S++ + ++ ++A P +V+ Sbjct: 119 QLLAMLQGLQQAGVRHITGDIVLDDSLYHLSPQERDAAAFDGKPWAAYNAVPHPLMVNFR 178 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE---LDVVPGDLNRF 229 + + G V + +Q++ + + L+ Sbjct: 179 TVKMQVTPQA--GKPKLALVPEIVNWKIDNQLQVRKGNCSGDGFTPSAVLERDDKGYAVM 236 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVAS 289 + G + + + + + +D + G ++ G + + + Sbjct: 237 HVAGTYATGCGAQDVMLVLGEASEQFYYLFRDLWYRLGGSFDGAGKV-AKTPSTAKHIYT 295 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S PL ++ M ++S+N++ + +G F+ PG+ G +AVR L + G++ Sbjct: 296 GLSEPLAVQIQRMNQESNNVMTRQLMLTLGAKTFDPPGSLEKGRNAVRMTL-EAFGINTD 354 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 II +G+GLSR L + + Q+L+YI D F+ L +AG G+L+ R Sbjct: 355 GMIIDNGAGLSRLELTSAEQLAQLLRYIYLSDQGQTFLQSLAVAGESGTLRKRY--RGEA 412 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 + G+V KTG++ V + AG++ SG+ V +G R + L R+ + Sbjct: 413 LAGRVIGKTGTIDNVRSFAGYVRAESGRNYVVVIIGNG--KSAVRSRAMQDDLFRWLYQ 469 >UniRef50_C3XCM9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Oxalobacter formigenes RepID=C3XCM9_OXAFO Length = 473 Score = 366 bits (940), Expect = e-100, Method: Composition-based stats. Identities = 106/480 (22%), Positives = 201/480 (41%), Gaps = 23/480 (4%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQMAL 59 ++ GL +A V A + + A ++ ++V++V ++ + +++ Sbjct: 10 KWFSGLFFILALPVFAQQLPSSVKYELELAGIPENSVGIVVEQVDSNVSRLTHNADIAFA 69 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAST KV+T AAL LGP + + T G E+GVL GDL+ + DP ++++ Sbjct: 70 PASTMKVLTTYAALELLGPSYTWETGAYISGKPEDGVLYGDLIIKGSGDPVFSQKELWLF 129 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + ++ +GV I GNV++D S+F + + + ++A P A +++ V L Sbjct: 130 IRQIQDAGVRDIRGNVILDRSVFKTGSFDAAAFDAEPLKPYNAGPDALLLNEKKIDVRLV 189 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + + V + + L G ++ + D G Sbjct: 190 PNESENTVKVVFEPRLDGVKITPPL--LSNGECGNWKKDIVL-QFDDRHANFDGIYSSTC 246 Query: 240 EP--LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 + + Y ++ K+AG + G + + +A +S L Sbjct: 247 QEKIWSVLPYQMSNTRYFESVFSTLWKEAGGRFKGRFV-DGTLPPEALKIAEWRSPELSS 305 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ + K S+N++A + IGH G A++ L + + G+ +I +GS Sbjct: 306 VVSTVNKHSNNVMARQLLLGIGHHELGDNADESMGIKAIKNWLASK-NISSGDLVIENGS 364 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR I+P TM ++L+ +S P+AG DG++ R L + + GK K Sbjct: 365 GLSRLEKISPLTMSRILKAAFHSPVMPELMSSFPIAGKDGTMSKR--LKEDAIAGKAHIK 422 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 TG++ V +AG++ SG+R V ++ + + + L Y+NN Sbjct: 423 TGAIDNVRAIAGYVLAKSGRRYIVVCMVNDPNAKLSR---------NMLNELLNWTYENN 473 >UniRef50_Q1H4D8 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H4D8_METFK Length = 468 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 116/458 (25%), Positives = 194/458 (42%), Gaps = 17/458 (3%) Query: 18 VQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + AA + E +++L + N+A+ VQ+V S+P +D+ S + AST K+++ A Sbjct: 17 LHAAAIPEPVSELLRKSGIPAENVAVYVQRVDQSSPLVDHQSDRPMKTASTMKLLSTYAG 76 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L LGP +R+ T + G++E+GVL G+L+ + DP L D+R M+ L+ +GV I Sbjct: 77 LELLGPGYRWRTQVYHDGSLEDGVLHGNLIIQGRGDPYLLAADMRMMLENLRLAGVEDIQ 136 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 G++++DT FA ++A P A V+ S I Sbjct: 137 GDIVLDTHYFARRFHDTAEFDGKPHAPYNAVPNAFAVNIKSTSFHFLVERGKLA---IEA 193 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVV---PGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 P L RG L V G+ T G P L V Sbjct: 194 DPILPEIHIHNQTNLVRGECGDWKSRLRFVVEPMGNEVAVTFKGDYPLACGSKTLELNVL 253 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + YA + + G G R + E ++ + S PL ++++ + K S+N+ Sbjct: 254 EDGPYAYGLFRSNWLSLGGKLQGG-WRYGVLPEDARLLLTHDSLPLSEIIRTINKYSNNL 312 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 + +F +G R + P G AV+ L + G+ ++ +GSGLSRH I Sbjct: 313 MVRQLFLTMGAERVSSPAMEADGVLAVKAWLASK-GLHFPELVLENGSGLSRHEQITARH 371 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M L ++S LP+ DG++ R L + G KTG++ GV LAG Sbjct: 372 MAAFLLAAYASPVMPEYLSALPIPSVDGTMANR--LRHSEARGSAHLKTGTINGVSALAG 429 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 ++ G+R V ++ + R + L+ + Sbjct: 430 YVHDRRGRRWVAVIMVNDPKASSS--RAAQDALIDWIY 465 >UniRef50_B9XRU4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=bacterium Ellin514 RepID=B9XRU4_9BACT Length = 514 Score = 366 bits (940), Expect = 1e-99, Method: Composition-based stats. Identities = 118/502 (23%), Positives = 210/502 (41%), Gaps = 44/502 (8%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAG------------ANLALMVQKVGASAPAIDYH 53 + L +F+ + + E + L + + + ++ Sbjct: 13 LVFSLFVFRSFAQETNRLPETLESLQKRIAKLVTKPQYDAGLFGVKIVSLDTGKTIYEHD 72 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG-NVENGVLKGDLVARFGADPTLK 112 + ++ PAS K+ T AL +LGPD+R T+L KG ENGVLKGDLV DPT+ Sbjct: 73 ANKLCSPASNSKLYTMAMALDRLGPDYRIKTSLYAKGKPDENGVLKGDLVIYGRGDPTIN 132 Query: 113 RQ--------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPP 164 + ++ V L +GV QI G+++ D S F GW +D+ + A Sbjct: 133 LKLHGNSMDMALQPFVDVLTNAGVKQISGDLIGDDSYFKQPPYGSGWSCDDLENYYGAEI 192 Query: 165 AAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVP 223 +A ++ N + + A + G + + + + ++ +T+ RG P Sbjct: 193 SALTINDNELILKVKPATQEGAPCELTLVPSTGYLQLINRTKTVARGQHRNINLY---RP 249 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN-- 281 N + G + + A +L + L + GI +G++ + Sbjct: 250 LGENVVYVEGEMAVDDAGSNEDATFHNPAGMFVTLLNETLAKRGIKITGSVRTVNWKDRE 309 Query: 282 ------EPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA---- 331 E + + S P+HD+++ + K S N+ D + +G Sbjct: 310 VQPFKSEEWVELGAVSSLPMHDIIREVQKPSQNLYTDLMLLHVGTKTAKPGAAMEGTTTE 369 Query: 332 --GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G A+R L + G+ TI +GSGLSR N+ PA +++LQ++ H +I+ Sbjct: 370 ELGIKALRTFLSE-IGIKRNETIFDEGSGLSRDNVTTPAATVKLLQHMGHHKCSDVYITA 428 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY- 448 LP+AG DG+L+ R + + V AKTG+L+ +L+G++TTASG+R+ F L+ Y Sbjct: 429 LPIAGVDGTLRKR--MKGTAGENNVHAKTGTLRWANSLSGYVTTASGERLVFSMMLNRYY 486 Query: 449 -AVEPADQRNRRIPLVRFESRL 469 + + + Sbjct: 487 NTDPNLSKTADMDAIAVMLAGF 508 >UniRef50_C6MCC2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Nitrosomonas sp. AL212 RepID=C6MCC2_9PROT Length = 468 Score = 366 bits (939), Expect = 1e-99, Method: Composition-based stats. Identities = 108/464 (23%), Positives = 198/464 (42%), Gaps = 20/464 (4%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPA 61 F + L + + + V + + QL + + V ++G+S P + ++ PA Sbjct: 10 FLIKLTALATPLFANELPFVVKQKLHQLAIPETAIGIYVHEIGSSQPVLTINADSSMNPA 69 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 S K++T A L LGP + + T L G + + VL GDLV + DP L ++ +V Sbjct: 70 SVMKLLTTYAGLELLGPAYTWQTILYANGKITDDVLYGDLVIKGYGDPKLDLENFWLLVH 129 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 L+ +G+ +I GN+++D S + + PG + ++ PP A +++ + L+ Sbjct: 130 RLRLTGLREIKGNLILDHSHYEIPRENPGEFDEQPYRTYNVPPEALLINYRASTFHLFPQ 189 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV------VPGDLNRFTLTGCL 235 P+ + + + + + ++ L + A L + + L G Sbjct: 190 PEKNSVRVVIDPVPESLRIKNNLK-LTQDKCVAWQNSLTIEAIADKESKNNFTIILNGRF 248 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 Q ++QD ASY + + Q G ++G Q + + QS PL Sbjct: 249 SQHCGKQSYMLSLQDSASYTDDLFRQLWIQQGGIFNGH-TILGQAPQYLPPLKIHQSPPL 307 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARF---NVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 ++++ + K S+N+ A ++ +G N P T A+R+ L + ++ + Sbjct: 308 AEIVRGINKFSNNIAARQLYLALGTGNSSIDNSPATLAKSDAAIRRWLASK-QMNFTELV 366 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 I +GSGLSR I+ M ++L FI+ LP+A DG+L+ R G Sbjct: 367 IENGSGLSRKERISARHMGKLLLAAFNSPVMPEFIASLPIAAVDGTLKNR--FADTPAKG 424 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL-----SGYAVE 451 KTG+L V LAG++ G+R+ V L + Sbjct: 425 LAHMKTGALNNVRALAGYLIDGMGRRVIIVFLLIMIKPNNPMPS 468 >UniRef50_D2M0Q1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Bacillus cellulosilyticus DSM 2522 RepID=D2M0Q1_BACS4 Length = 494 Score = 363 bits (932), Expect = 8e-99, Method: Composition-based stats. Identities = 111/458 (24%), Positives = 203/458 (44%), Gaps = 22/458 (4%) Query: 11 TSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 + + ++DE I + + V+ + + Q+ PAS K++T Sbjct: 29 AAALDTLALKEDLDELIIHHSDINHGKIGVSVRSFQTGELLYEQNVNQLLTPASNMKILT 88 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 ++AAL LGP++ FTT L GN +LKG++ + D TL DI +V+ LK+ G+ Sbjct: 89 SIAALELLGPNYHFTTELLIDGNTRWQLLKGNVYIKGKGDATLLPTDIEKLVSELKQQGI 148 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA------IVDRNCFSVSLYSAP 182 I G+++ D S F S PW+D + AP +A V+ + + Sbjct: 149 KYIFGDIVADDSWFDSIRHPIDMPWSDEMYGYGAPISALTVAPKKNVEGGTIIIEIMPNE 208 Query: 183 KPGDMAFIRVASY-YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + G A I+ V + ++ T+ + N+ + G + Q + Sbjct: 209 QIGQPAVIKTVPDTEYVEVINESITVTDSERNNISIK---KKHGTNQIYINGHINQTEKK 265 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + +V + +Y + + LK+ I G + + + S+PL +LL Sbjct: 266 IEKLMSVWEPTNYVLHLFSEYLKKEEIRHLGNV-TLGDTPKEAKLFTVHHSSPLSELLFP 324 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 +K SDN++ +++ + +G ++ G+W G A+++ L + NTII DGSG+S Sbjct: 325 FMKYSDNVLGESITKEMGKFKYG-DGSWECGLRALQEALA-HYDMKTENTIIRDGSGISH 382 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSA 416 N I+ + ++L I + F S LP++G+D G+L+ R + + GKV A Sbjct: 383 VNAISTNDITKLLYEIKKEHWFPLFKSSLPISGHDSKYLGGTLKDR--FTNSRMKGKVKA 440 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 KTG+L V +L+G++ T + + F + Sbjct: 441 KTGTLTSVSSLSGYLETKGEESIIFSIITNDITNSKKA 478 >UniRef50_C6X959 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6X959_METSD Length = 480 Score = 363 bits (931), Expect = 1e-98, Method: Composition-based stats. Identities = 119/467 (25%), Positives = 201/467 (43%), Gaps = 18/467 (3%) Query: 15 AFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 A +V V + + Q A ++A+ Q++ P I + + PAST K++T AAL Sbjct: 16 AHAVLPLPVSQALQQAGLADDDVAVYAQRLDLPLPVIAHRADAALNPASTMKLLTTYAAL 75 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 LGP +R+ T + G + +GVL+G+L+ R DP L +D ++ L++ GV I G Sbjct: 76 DMLGPAYRWRTEIYRDGPLVDGVLQGNLILRGEGDPALMAEDFWRLLGRLRQLGVRDITG 135 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 +++ID S FA + D + ++ +A +++ S+ L + + Sbjct: 136 DLIIDNSYFAPQAQDAAAFDGDGYRAYNVTASALVINLQASSLRLAVSADSPARVEVSAE 195 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDV------------VPGDLNRFTLTGCLPQRSEP 241 P + + R S L P TL+G Sbjct: 196 PALPGVVVQNRLQVTRDSCGDWRSRLQYKVQPKVEPQAANDPVRGVSITLSGTFSADCGE 255 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 L +V DG Y + + + G + G + Q + + PL D+L+ Sbjct: 256 KYLELSVLDGPQYTYQLFQSLWQSLGGSLHGEVRLQALPPQAVKLTDQLSPLPLADVLRR 315 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 + K S+N++A + + + N+P T AG++AVRQ L ++ G +I +G+GLSR Sbjct: 316 LNKYSNNLMARQLLLTVAAQQGNLPATEEAGANAVRQWLVKK-GYRFPELMIENGAGLSR 374 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 I+P + +L +S LP+ G DG+L R + V G+ KTGSL Sbjct: 375 VERISPRHLGNILADAYAGPWMPELMSSLPVLGVDGTLLKR--MQGQPVQGRAHLKTGSL 432 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 GV LAG++ GQ V + A R+ + L+ + R Sbjct: 433 NGVSTLAGYVLDQHGQPWLLVFMANHP--RAAATRSAQDALINWIYR 477 >UniRef50_Q5WEI1 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WEI1_BACSK Length = 489 Score = 362 bits (930), Expect = 1e-98, Method: Composition-based stats. Identities = 120/445 (26%), Positives = 203/445 (45%), Gaps = 22/445 (4%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 AGA++A+ V+ + +++ + PAS+ KV+TA+AAL +LG D F TT+ T G Sbjct: 47 LAGASVAVSVRDGATNELLFEHNGNMLLHPASSMKVLTAVAALTELGSDHTFKTTVFTDG 106 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + VL G++ + G DPTL ++ + ++ G+ +I+G+++ D S + + Sbjct: 107 KISKRVLHGNVYIKGGGDPTLMEAELNELAQEVRNKGIKKINGDIIADESRYDDVRLSQD 166 Query: 151 WPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVASY-YPVTMFSQ 203 W+D + A +A + D V + K G + V + ++ Sbjct: 167 LNWSDESFYTGAQVSALTLSPTDDYDAGTILVEVTPGKKAGQKPIVTTQPDVKAVPIINE 226 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 T+ ++ E + +TG +P + AV + A Y A+ K L Sbjct: 227 AVTVAAEEQKSLKIERE---HGKADIRITGNVPIGASATRSWVAVWEPAQYTTAVFKQAL 283 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 AGI V + A ++S PLH+LL LK S+N + + + IG+ + Sbjct: 284 NNAGIDIKKADETIGYVPKKAVKQAERESMPLHELLVPFLKLSNNGHGEVLVKEIGYVKE 343 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 G+W AG V + +Q G G ++ DGSG+S L+A + VL + Q Sbjct: 344 G-EGSWDAGLPLVAES-TEQLGAS-GPLLLRDGSGMSHKTLVAANDLTSVLYHAQQQHWF 400 Query: 384 LNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 +F + LP+AG G+L+ R G G++G+V AKTGSL GV +L G+ T G Sbjct: 401 TDFYNGLPVAGEKERLVGGTLRNRLG----GIEGEVRAKTGSLTGVSSLTGYARTNDGDS 456 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLV 463 F ++ + E R+ +V Sbjct: 457 YLFTIMVNNFIGESQTIRHIEDEIV 481 >UniRef50_Q4C8Q4 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Chroococcales RepID=Q4C8Q4_CROWT Length = 491 Score = 361 bits (926), Expect = 3e-98, Method: Composition-based stats. Identities = 102/457 (22%), Positives = 204/457 (44%), Gaps = 21/457 (4%) Query: 12 SCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + + + +D + Q ++ ++V+ + + +SQ+ +PAS K++T Sbjct: 42 ISVCQADLKSKIDTILDQEELKRSHWGILVKNLDNQTTLYELNSQKYFIPASNVKLLTTA 101 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQ 130 A LI+ G +++ T + G+ N + L DPT + + + LK G+N Sbjct: 102 ATLIKFGANYQIKTPVYVSGSYPNLSV---LKIVGQGDPTFNSKQLETLAKELKARGINS 158 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA-- 188 ID N+++ S P W W D+ ++ I++ N ++L + +A Sbjct: 159 ID-NLIVQDSPLEKPSINPTWEWEDIQFYYAPAVNKLILNENTVILTLNTQEIGEKLAMD 217 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + + + ++ T G ++ Y T+TG L S+P L V Sbjct: 218 WSDSIAANQWIIDNKTVT---GEEDSSYSVSINRNFAKPLLTITGSLAINSDPRILGMTV 274 Query: 249 QDGASYAGAILKDELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 + Y ++ L++ GI ++ E + S PL +++ + S+ Sbjct: 275 VNPGEYFLNSVQFYLEKEGINIIKSQVVYGDSATENLVKIIEINSDPLQEIITKTNQDSN 334 Query: 308 NMIADTVFRMIGHARFNVPGTWRAG-SDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 N+ A+++ ++ V GT D +++IL + G+D + + D SGLSRHNL+ Sbjct: 335 NLYAESLLNLL------VNGTPENSSLDNLKEILTE-LGLDTNSYHLKDASGLSRHNLVT 387 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P T++ +L +A+ +N+ LP+ G +G++ R + ++GKV AKTG+L G + Sbjct: 388 PETLVNLLTLMAETPEGINYRDSLPIGGVNGTITNR--FKKTIIEGKVQAKTGTLSGTSS 445 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 L+G+I + +AF ++ ++ + R +V Sbjct: 446 LSGYINPPNYAPLAFSILVNKSDLKSSQLRQIIDKIV 482 >UniRef50_D1K326 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Bacteroides RepID=D1K326_9BACE Length = 466 Score = 360 bits (925), Expect = 5e-98, Method: Composition-based stats. Identities = 124/470 (26%), Positives = 206/470 (43%), Gaps = 11/470 (2%) Query: 2 RFSRFIIGLTSCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 F +I I + +D + ++ + + + V + A Y ++ P Sbjct: 5 LFFFLLILSIHSINAQPLSQRLDALLHEEVLKTSEVGIAVFDLTAGESVYRYQDDKLYRP 64 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS +K+IT++ AL+QLG D+ T+L +G +EN LKG L G DP +D+ +V Sbjct: 65 ASVEKIITSVTALVQLGADYTMDTSLRYRGKIENDTLKGSLYLIGGFDPEFMDEDLDRLV 124 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 L G+ + + D S+ S GW W+D F + +++R C VS+ Sbjct: 125 DALASKGIRYVTDTLAADVSMTDSVYWGSGWCWDDTPYSFQPYLSPLMLNRGCVDVSVSP 184 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 A K + + + + R + + N T++G + S Sbjct: 185 AQKDSLPKVVCTPVSDYYQVHNHG--VSRNPQAGKLKITRNWLSNGNIITVSGNV---SY 239 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 P V + L+ GI V V PL ++L+ Sbjct: 240 PYTEKLNVYTSKDFFFHTFVSRLRSKGIEARTCTYADCPVTADSIVTLYTVRRPLKEVLE 299 Query: 301 IMLKKSDNMIADTVFRMIGHARF-NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 LKKSDN+ A+++F + R + T G+DA+ ++ G + N IADGSG+ Sbjct: 300 RALKKSDNLCAESMFYHLAAKRSLHKRVTGEDGTDAIHAFMKTALGFNPENYKIADGSGV 359 Query: 360 SRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 S +N I+P +++ L+Y H + L F LP+AG DG+LQ R + Q G V AKT Sbjct: 360 SVYNYISPRLLLEYLKYAYYHREVFLPFYESLPIAGVDGTLQNR--MKQTKARGNVHAKT 417 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 GS+ GV +LAG++ A+G ++AFV + ++ + R + SR Sbjct: 418 GSVTGVSSLAGYVKAANGHQLAFVII-NQNVLKLSRARAFQDKFCDILSR 466 >UniRef50_A7HHA8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Anaeromyxobacter RepID=A7HHA8_ANADF Length = 758 Score = 360 bits (924), Expect = 7e-98, Method: Composition-based stats. Identities = 103/442 (23%), Positives = 193/442 (43%), Gaps = 8/442 (1%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 +GA ++V V + + + PAS K++T+ AAL +LGP +RF+T L Sbjct: 70 SALSGARAGVVVADVASGEVLYARDADVLLNPASNVKLVTSAAALARLGPGYRFSTELLV 129 Query: 89 KGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 L R DPTL + + + L G+ +I G V++D F Sbjct: 130 DPASARAASVRTLYVRGRGDPTLVTERLWAVSGELVHQGIRRI-GEVVLDDGFFDGERIG 188 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV-TMFSQVRTL 207 PG+ + + + AP A ++ N +V + + G + + + ++ RT+ Sbjct: 189 PGYDQEEGDRSYLAPTGALSLNWNTVAVYVAPGDRRGQKGRVELEPQSAYFEVVNRTRTV 248 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 E +V R ++G +P S + + D Y G L L+ G Sbjct: 249 GPRGRRHVTVESSLVN-GKQRIVVSGPVPAGSRVQAVWRKIDDPPRYLGHTLAKLLELRG 307 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 + +G + V +V +S L ++++ + K S+N +A+ + + +G PG Sbjct: 308 VKVTGAIRV-GTVPPGAKLVHVAESETLAEIVRRLNKSSNNFVAEQLLKTLGAEAKGAPG 366 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNF 386 +W G +A + L GV G ++ +GSGL+ N + ++ +L+ + + + Sbjct: 367 SWSKGVEAAGEFLAS-IGVSRGAYVMKNGSGLNDANRFSARQLVTLLRAMWSRFPLQAEY 425 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 ++ LP+AG DG+ ++R + DG + AKTG+L V +L+G++ TA + +AF ++ Sbjct: 426 VTSLPVAGRDGTTRWR--MDGTAADGHLRAKTGTLDNVTSLSGYVETAGKRTLAFAILVN 483 Query: 447 GYAVEPADQRNRRIPLVRFESR 468 Y A L + Sbjct: 484 DYPGRHAGVVRAVDALGSAIAA 505 >UniRef50_Q1Q300 Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q300_9BACT Length = 497 Score = 360 bits (923), Expect = 8e-98, Method: Composition-based stats. Identities = 110/494 (22%), Positives = 196/494 (39%), Gaps = 32/494 (6%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDE----------YITQLPAGANLALMVQKVGASAPAI 50 MR I L +C+ V+ + L A+ + V + + P + Sbjct: 12 MRSCIIFIALFTCLTLPVKVIKAEPTHLNEQIRNILQKYLLKNAHCGISVVSLKTNTPVV 71 Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADP 109 +Y S + + AS K+ T AL LG DF++ T++E GN++ +G L+G+++ R DP Sbjct: 72 NYQSNDLFMVASNMKLATTATALEYLGTDFKYNTSVEADGNIKSDGTLEGNIIIRGSGDP 131 Query: 110 TLKRQDIR--------NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 L + + K G+ +I G+++ D SIF + WP N + + + Sbjct: 132 NLSGRFYNNNILTIPNAWLQATKNLGIQKITGDIVADDSIFDRNYINDAWPKNQLHEWYC 191 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 AP + + NC + + + S E Q+ Sbjct: 192 APTSGLSFNDNCIDIIFVPRNNVNKKVSLLIEPNTSFVTIHNECI--YTSEEKQHAYSIY 249 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN 281 N + G + +V + Y + K+ LK GI+ G + + Sbjct: 250 RKPGTNDIYVKGKFWTNASQKREWVSVHSPSLYLATLFKEMLKNGGISVFGIARLINEND 309 Query: 282 E-----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 +A S + + I K+S N A+ + + +G T G + Sbjct: 310 RISYSNKPIKIAQTIS-TMEQSIHITNKRSQNFYAEQIIKTLGAHIKGCGNT-ENGLQVI 367 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 ++ + G D I DGSGLS+ N ++P + +L Y+ H + F LP++G D Sbjct: 368 SAFMK-KLGYDSEEYKIRDGSGLSKENKLSPNMITTLLSYMNTHKHGKVFCDSLPISGID 426 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G L R + GK+ AKTG + G L+G+I T+ G R+AF ++ + D + Sbjct: 427 GGLHRR--MASLQYKGKIHAKTGYIAGASALSGYIDTSKGDRLAFSILINNF-KSLRDAK 483 Query: 457 NRRIPLVRFESRLY 470 + + +F + Sbjct: 484 KAQDEICQFLADNL 497 >UniRef50_C5V7M7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V7M7_9PROT Length = 459 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 114/471 (24%), Positives = 212/471 (45%), Gaps = 18/471 (3%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQM 57 + LT A + A ++ + + A + ++ V+K+GA AI +++Q Sbjct: 1 MNYLFALLTLFAALNATATHLPPAVLRELKSAGIPLSATSITVRKIGAPKAAISINAEQP 60 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAST K++T A L LGP + + T G +ENGVL+GDL+ + DP + Sbjct: 61 MNPASTMKLLTTFAGLELLGPAYTWKTEAYLDGKLENGVLQGDLILKGYGDPKFTIEQFW 120 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 +A L+ G+ +I GN++ID S F G ND + ++ P A +++ N + Sbjct: 121 LWMAELRARGLREIRGNLVIDRSFFDLPQLDSGAFDNDPVRAYNVTPDALLLNFNTLRLR 180 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + + I V + SQ+ P+ + + + V + R L G P Sbjct: 181 YIP--EGNRLRVIIEPMLEGVRLDSQL--APQAGSCEDWDDTIRVQANDERLLLQGGYPA 236 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 + +V + Y A+ + Q G + +G R ++ + ++ +S P+ Sbjct: 237 ECGEREHSLSVLSHSRYVDAVFRAAWHQLGGSLTGR-QRDGLLSSSAQLFSTHRSEPMSL 295 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ + K S+N++A +F +G + + A+R L ++ G++ ++ +G+ Sbjct: 296 AIRDINKYSNNVMARQLFLTLGTTTS---ASIPGSTAAMRSWLTKK-GLNFPELVLENGA 351 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR I+ M Q+LQ I + I+ LP+ G DGS++ R L + K Sbjct: 352 GLSRVERISAEHMAQLLQSITESPYSAELIASLPILGIDGSVKKR--LKNSPAASHAHLK 409 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 TG+L GV LAGF+ SG++ + V +++ + + L+ + Sbjct: 410 TGTLDGVKTLAGFVQAHSGKQWSVVFFINHPNAKRGQ--AAQDALIEWLQG 458 >UniRef50_D1RE40 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Legionella RepID=D1RE40_LEGLO Length = 469 Score = 359 bits (922), Expect = 1e-97, Method: Composition-based stats. Identities = 119/470 (25%), Positives = 225/470 (47%), Gaps = 21/470 (4%) Query: 1 MRFSRFIIGLTSCIA-----FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQ 55 MR+S + L + + A +DE I Q A + + V+ ++ Sbjct: 1 MRYSNCLCFLAAILFNQAANSQTLAEKIDEIIKQQLPHATIGVFVKDAQTGKVIYRRNAD 60 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 ++ PAS+ K+ TA AAL QL PDFRF TTL K + +F P+ +++ Sbjct: 61 KLLSPASSMKLFTAAAALYQLKPDFRFATTLFQKDQ--------NYYIKFTGSPSFTQKN 112 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + ++ + KK+ ++ I+GN++ID+S + + + G ++D+ ++AP A I++ N S Sbjct: 113 LTELLLSFKKNHISTINGNIIIDSSQYQAPNYPSGTSYDDLGWYYAAPDTAVILNENKVS 172 Query: 176 VSLYSAPKPGDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGC 234 L SA + G A I+ + + + +QV T+ + E +C L++ N + GC Sbjct: 173 FDLISAKQLGKPAQIKAKTTPNALKLINQVITVSKEE-EKGHCSLNLEIKPDNTIRIFGC 231 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 + Q P + A+ D +K L + GI G + V S S Sbjct: 232 MIQDKNPKLIELAIPDPILLVKQNIKKILGKNGIVLKGEI-TSGLSPADAQKVMSFHSKS 290 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 L L+ ML++SDN+ A+++ + +G++ GT + G+ A++++L + +D+ + Sbjct: 291 LDKLITHMLQQSDNLYANSLTKKLGYSLTGK-GTHKEGAFAIKKVLSEHTHLDMSQIELV 349 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DG G +R+NL+ P ++ +L + + + LP AG G+L+ R + + +D K Sbjct: 350 DGEG-TRYNLVTPEQIVLLLSDLYDDKGIQSILLHALPQAGVSGTLKER--MKKTILDKK 406 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V AKTGS+ + +L+GF+ + + F ++G + ++ Sbjct: 407 VYAKTGSMHDISSLSGFMVNPNEKTYIFSIIINGVNKPLEKAKALEEKIL 456 >UniRef50_Q02AA2 D-Ala-D-Ala carboxypeptidase. Serine peptidase. MEROPS family S13 n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q02AA2_SOLUE Length = 502 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 121/479 (25%), Positives = 207/479 (43%), Gaps = 41/479 (8%) Query: 22 NVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 + + I PA A + + + + + + +PAS K+ + AL +LGPD Sbjct: 29 AIQKLIDSSPAARTAFWGIQIVDLASGKTLYELNPDHYFVPASNAKLFSTALALTRLGPD 88 Query: 80 FRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKR---------------QDIRNMVATL 123 + F T + + G + GDL G DP L I ++ L Sbjct: 89 YTFQTRVFADAPPDSQGRISGDLRLIGGGDPNLSARAIPYRMGPPTGNPLAAIEDLADQL 148 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 G+ + G+++ D + + A GW +D P +A + N ++S++ Sbjct: 149 AARGIRIVSGDIVGDDTWYVWQPYAVGWAIDDPQSDDGPPISALTLSDNALNLSVHPGAA 208 Query: 184 PGDMAFIR-VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 G++A + + ++VRT+ G + D L G +P R Sbjct: 209 VGEVAELAFSPPLEFYRIENRVRTVAAGGERRVHFHRIPGSRDA---VLWGTIPLRDRGQ 265 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--------------PGTVVA 288 + +V+D A +A L++ L+ GIT G Q G +A Sbjct: 266 DMLTSVEDPAEFAAEALRNALEARGITVEGAARSQHLFPNQLADLTQAPPSEAVGGVELA 325 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 ++ SA L + L++ K S N+ A+ + R +G AR NV G++ AG ++ L AGV+ Sbjct: 326 NRSSARLVEDLRVTAKVSQNLHAELLLRAVGRARRNV-GSFEAGMTEMKIFLAD-AGVEP 383 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 + DGSGLSR +L+ PAT++++L+++ N++S+ P+ G DG+L R G Sbjct: 384 TGYNLLDGSGLSRLDLVTPATVVRLLRFMYDSPARDNWLSIFPIGGQDGTLSTRFG--GT 441 Query: 409 GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP-ADQRNRRIPLVRFE 466 G+V AKTGSL V L+G+I G +AF ++ Y A+ R + Sbjct: 442 PAAGRVLAKTGSLSHVSALSGYIQRLDGTWLAFSILVNNYGGRSVAEVRGVMDRICNLI 500 >UniRef50_C3K5C8 Putative penicillin-binding exported protein n=1 Tax=Pseudomonas fluorescens SBW25 RepID=C3K5C8_PSEFS Length = 514 Score = 359 bits (921), Expect = 2e-97, Method: Composition-based stats. Identities = 119/465 (25%), Positives = 200/465 (43%), Gaps = 22/465 (4%) Query: 11 TSCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 + ++ + +D + GA ++LMV+ + + ++ + +PAS K++T Sbjct: 52 CASVSQTSTPGTLDHLMADPALNGATVSLMVRDARSGSTLYQHNPRTRVIPASNLKLLTT 111 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AA+ LGP +RF+T L G + L G+L R DPT + D + + A L GV Sbjct: 112 AAAMDVLGPQYRFSTQLLGNGTQQGERLSGNLYLRGLGDPTTQFADYQALAAQLAGQGVR 171 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN------CFSVSLYSAPK 183 Q+ G+++ D + F + W +D + + A +A V N V+ + Sbjct: 172 QVQGDLVFDDTWFDAERLGVDWAQDDESTYYGAQISALTVSPNADFDAGTLLVTAKAPVA 231 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 G + V+ + G+ N LTG L + Sbjct: 232 VGQPVSVVVSPSTDYVQLNNRAVSGPGNTYGI-----TRQHGTNLLQLTGALAPGKQSRQ 286 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 +V + + + L Q GI G + V+A QSAPL +L+ +L Sbjct: 287 -WVSVWEPTQLVANLFEQALAQQGIQVLGRRVIGGTSPATARVLAEHQSAPLQELITPLL 345 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 K S+N +++ + + +G N GT +AG AV +R+Q G+D DGSGLSR N Sbjct: 346 KLSNNNMSEALLKAMGRKTANA-GTAQAGVAAVADFMRRQ-GLDPMTLSQVDGSGLSRRN 403 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKT 418 ++ + +L A+ + + LP+AG GSL+YR L + AKT Sbjct: 404 WVSSQNLTDLLLAAAKQPWFEAWYNALPIAGDPDRMTGGSLRYR--LRGTAAQNNLHAKT 461 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 GS+ GV +L+G+IT A G+R+ F + Y + R + Sbjct: 462 GSMAGVSSLSGYITDADGRRLVFSMISNNYVSDATPIRALENRVA 506 >UniRef50_B0TT55 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Shewanella RepID=B0TT55_SHEHH Length = 476 Score = 357 bits (917), Expect = 4e-97, Method: Composition-based stats. Identities = 168/485 (34%), Positives = 256/485 (52%), Gaps = 26/485 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGASA------PAID 51 RF+ T C+ +A D+Y+ + P + A++V + + PA Sbjct: 2 LKRFVAATTLCLI--ATSAVADDYLANMVKAIEPKTSQTAIVVSPLNLNDEGHVSSPAYR 59 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 +Q++ +PAST K++TA+AA LG DFRF T +++ ++N ++GDL RF DPTL Sbjct: 60 KDAQRLFVPASTMKLLTAVAATTALGKDFRFKTQIDSFVGIKNRRIEGDLFIRFDGDPTL 119 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 +D+R + LKK G++ IDGN+ + +APGW W+D+ C++AP + IV++ Sbjct: 120 TGRDLRQLFKQLKKHGLDHIDGNLYLIGDQ-QETLQAPGWVWDDLGICYAAPVSRYIVNQ 178 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 NC L + + PV++ S G + +CEL + N F L Sbjct: 179 NCVKAKLSPTLADNQGKLTF-SQFEPVSIASTAVFDKVG--DTPFCELSLQRQANNEFIL 235 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 +GC +PL LA A+ D A YA + + L GI G +L ++ ++A Q Sbjct: 236 SGC-HAGQKPLNLAIAISDPALYAQKTVANTLTSIGINIKGDVLLTSKRPANTILLAEHQ 294 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S PL +L IML KSDN+IAD++ + +G + VPGT+ GS A++QIL +Q GVD+ + Sbjct: 295 SKPLSELTDIMLLKSDNLIADSLLKRLGQYIYGVPGTFINGSAAMKQILTEQ-GVDLSSA 353 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 I DGSGLSR+NL++ ++QVL + Q + I LP+AG G+L+YR G + + Sbjct: 354 NIVDGSGLSRYNLLSADQLIQVLLLLKQKEQLNFLIDQLPIAGKSGTLKYRNGYTASPLK 413 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 G V AKTGS+ GV NLAGFI GQ AFV +G++ L F Sbjct: 414 GSVLAKTGSMMGVTNLAGFIK-KDGQLSQAFVILENGHSPSVKKS-----ELAPFNVLFL 467 Query: 471 KDIYQ 475 + + Q Sbjct: 468 QSMVQ 472 >UniRef50_P39045 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Actinomadura sp. R39 RepID=DAC_ACTSP Length = 538 Score = 355 bits (912), Expect = 2e-96, Method: Composition-based stats. Identities = 118/455 (25%), Positives = 188/455 (41%), Gaps = 22/455 (4%) Query: 22 NVDEYITQLPAGANL-ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 ++D + + ++V + LPAS K+ TA AAL LG D Sbjct: 57 DIDAILEDPALEGAVSGVVVVDTATGEELYSRDGGEQLLPASNMKLFTAAAALEVLGADH 116 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 F T + + DL DPTL +D+ M A + SGV + G++ D + Sbjct: 117 SFGTEVAAESAPGRRGEVQDLYLVGRGDPTLSAEDLDAMAAEVAASGVRTVRGDLYADDT 176 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVAS 194 F S W D +SA +A V D VS+ A + A+ Sbjct: 177 WFDSERLVDDWWPEDEPYAYSAQISALTVAHGERFDTGVTEVSVTPAAEGEPADVDLGAA 236 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 + ++ T GSA + P N +TG LP + P+ V + A+ Sbjct: 237 EGYAELDNRAVTGAAGSANTLVID---RPVGTNTIAVTGSLPADAAPVTALRTVDEPAAL 293 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 AG + ++ L+ G+T G + + V+A SA L ++L +K S+N A+ Sbjct: 294 AGHLFEEALESNGVTVKGDVGLGGVPADWQDAEVLADHTSAELSEILVPFMKFSNNGHAE 353 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 + + IG GTW AG V + L GVD ++ DGSGLSR NL+ T++ Sbjct: 354 MLVKSIGQETAGA-GTWDAGLVGVEEALSG-LGVDTAGLVLNDGSGLSRGNLVTADTVVD 411 Query: 373 VLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 +L + + LP+AG G+L R + +G V AKTG++ GV L Sbjct: 412 LLGQAGSAPWAQTWSASLPVAGESDPFVGGTLANR--MRGTAAEGVVEAKTGTMSGVSAL 469 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 +G++ G+ +AF +G++ I + Sbjct: 470 SGYVPGPEGE-LAFSIVNNGHSGPAPLAVQDAIAV 503 >UniRef50_A6Q7A0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Sulfurovum sp. NBC37-1 RepID=A6Q7A0_SULNB Length = 577 Score = 355 bits (911), Expect = 2e-96, Method: Composition-based stats. Identities = 98/449 (21%), Positives = 192/449 (42%), Gaps = 11/449 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKV-GASAPAIDYHSQQMAL 59 M+ S + ++ A ++++ +++ ++ ++ + Sbjct: 1 MKRSIVWFFALTMYIHALPAGINQIIGKSGIPKKDISIYIKEAGNSNRVVASLNADKSRT 60 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS KV++ AA+++LG D+R+ T + G ++NGVL GDL+ + DPTL +D+ + Sbjct: 61 PASVVKVLSTYAAVLKLGFDYRWPTKFYSTGKIKNGVLYGDLLIKGFGDPTLSDKDLPEI 120 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 VA +K G+ QI GN++ID S F K ++A P A + + ++ + Sbjct: 121 VAKIKAKGIRQITGNIVIDRSYFKVGTKDNSGFDQHTYSPYNAMPDAMMFNERISTICVT 180 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN--RFTLTGCLPQ 237 + + ++++ + + V N L G + + Sbjct: 181 PKKN----VVTKQTPDASYRVVNKLKPVNKPCRGRYSWPSFKVDKKQNPTTVLLKGPISK 236 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 L + LKD L+++G++ G R ++ + + S PL Sbjct: 237 HCGTRKLCQVITKPYKSFYYALKDALQKSGVSVKGG-FRLNKIPRDAKELFTHYSQPLEK 295 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ KKS+N+ A + +G + P T G AV IL+ + + G I +G Sbjct: 296 IISKTAKKSNNLYARHIMLFLGAKMYGAPSTLSKGRQAVEYILKSRGALKSGPLHIDNGC 355 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLSR + I + VL + ++ L +AG DG+++ R V + K Sbjct: 356 GLSRSSRITAKILAGVLDDAYTR-YGMRWMKTLSIAGVDGTIKRR--FRGTIVRNRAWMK 412 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLS 446 TG+L+ V N++G++ + +G+ V ++ Sbjct: 413 TGTLKRVKNISGYVKSRNGRVYTTVILVN 441 >UniRef50_B8CP00 Penicillin-binding protein 4 n=1 Tax=Shewanella piezotolerans WP3 RepID=B8CP00_SHEPW Length = 463 Score = 353 bits (906), Expect = 9e-96, Method: Composition-based stats. Identities = 156/451 (34%), Positives = 237/451 (52%), Gaps = 8/451 (1%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M + + S AAN + I LP + L + ++ +D +S +M +P Sbjct: 1 MNLRKILASAILLTFSSNVAANDIKLI--LPDTSALTAIKYSNHQNSTKLDQNSDKMFIP 58 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST K++TA+AA LG F++ T + K +ENG + GD+ F DPTL DI ++ Sbjct: 59 ASTMKLLTAIAATASLGDQFKYQTKVLAKTPIENGKIDGDVYILFSGDPTLTSLDIESLF 118 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 A L++ G+ I GN+ + + APG W+D+ C+SAP ++ I++ NCF Sbjct: 119 AQLQQQGLALITGNIYLVGEEY-ELQHAPGRVWDDLGICYSAPVSSFIINENCFKAEFVP 177 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 D +++ PV++ S+ + S + C+L + + N F L GC P S+ Sbjct: 178 RLAD-DAGEVKIVGSEPVSIESRA--VFDKSLQQPICDLTLARLENNHFRLDGCYP-GSK 233 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PL L A+ D A +A L +K I G +L +Q VA QS PL DL+ Sbjct: 234 PLKLNIAITDPARFAKDKLTQIVKNTKIVLRGQVLIASQFPAYSLSVAEHQSEPLTDLIA 293 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 ML KSDN+IAD++ + +G + PGT+ +GS A++ IL QQ G+D+ N I DGSGLS Sbjct: 294 TMLLKSDNLIADSLLKRLGQQVYGAPGTFASGSAAMKLILTQQ-GIDLSNAHIVDGSGLS 352 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R+NL++ + + L + + N I+ LP+AG G+L+YR G + GKV AKTGS Sbjct: 353 RYNLLSANQIAEGLALVRDNPAYTNIINSLPVAGESGTLKYRKGYANVSLKGKVLAKTGS 412 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 + GV N+AGFI FV +G + E Sbjct: 413 MLGVSNMAGFIKNGDKITATFVVLQNGVSPE 443 >UniRef50_Q1DDE3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cystobacterineae RepID=Q1DDE3_MYXXD Length = 748 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 109/450 (24%), Positives = 208/450 (46%), Gaps = 11/450 (2%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 ++++A + + + +++Q + A +++ ++ PAS K++T+ AAL L Sbjct: 39 ALKSALLQVLQRAPLKASRMGVLMQSLDDGAVVFSHNADELLNPASNVKLVTSAAALASL 98 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 GP+FR+ T + + L R DP++ + + +VA L +GV + G ++ Sbjct: 99 GPEFRYDTEFLVEPELGADGKVKTLYVRGKGDPSMTTERLWGIVAELWHAGVRDV-GEIV 157 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR-VASY 195 +D S F + PG+ D + + AP A ++ N ++ L PG + Sbjct: 158 VDDSWFDAERTPPGYDQEDTDRAYMAPTGAVSLNWNAVAIYLRPGNAPGAKGVVEMDPPS 217 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR-FTLTGCLPQ-RSEPLPLAFAVQDGAS 253 + +Q+ T PR A+ + P L + + G LP R + + + + Sbjct: 218 DYFVVENQLTTGPRR---ARRVSVTSDPSGLQQKIVVRGQLPGERGGAVSVWKKIDNPPM 274 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 Y G LK L G+ G + + + + ++ QS LLK + K S N +A+ Sbjct: 275 YFGQSLKQMLVTRGVKMKGKV-KLGKTSTKARMLHVSQSDTFDVLLKRLNKLSSNFVAEQ 333 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + + +G PG++ G D V Q L + G+ G ++ +GSGL+ N + + Q+ Sbjct: 334 LLKTMGAELRGSPGSFTKGVDVVEQFLERDVGIPRGTYVMKNGSGLNDANRFSATQLNQL 393 Query: 374 LQYI-AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 L+++ + ++S +P+AG DG+L+YR + G++ AKTG+L+ V L+G++T Sbjct: 394 LRHMVQRFPFSPEYLSSVPIAGKDGTLKYR--FEGSDAVGRLRAKTGTLESVSALSGYVT 451 Query: 433 TASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 +A G+R F + +A L Sbjct: 452 SAGGERFTFSIMANDFAGRAGPIVAGLDAL 481 >UniRef50_B1XIE9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XIE9_SYNP2 Length = 479 Score = 352 bits (904), Expect = 1e-95, Method: Composition-based stats. Identities = 100/464 (21%), Positives = 194/464 (41%), Gaps = 30/464 (6%) Query: 9 GLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQMALPAST 63 + +A S + ++ I+Q+ + +Q + ++ + +PAS Sbjct: 23 FSSQSLAQSQETCDLSGTISQILQRPEQQQTQWGIAIQDPQTDSLLFEHRADTFFVPASN 82 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 QK++T AAL+ GP++++ T + T G N L+ R DP+L + + ++ L Sbjct: 83 QKLLTTAAALVSFGPNYQYQTPIYTVGTAPNLEK---LIIRGVGDPSLTTEKLTTALSQL 139 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 + ++ ID V++D+S F P W W+D++ + P + +++ N ++++ Sbjct: 140 SQQQIHHID-QVILDSSHFPEPGVNPTWEWSDLSFYYGVPVTSLMLNENAVVLTVFPTES 198 Query: 184 PGDMAFIRVA--SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + + +Q+ T P + Y TLTG L + P Sbjct: 199 GQTTTVGWSDDIAAQQWQLENQMVTAPDDTP---YSGSLTQTYGTTTLTLTGKLAADAMP 255 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN--EPGTVVASKQSAPLHDLL 299 ++ D YA + L + GIT +L QT + + + + S PL ++L Sbjct: 256 DIWGLSIPDPDRYALDKITQILGEQGITVGKSLTTQTPIPNLDQAQPLGAIASDPLAEIL 315 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 K + S+N+ A+++ + + A + + + + GVD + DGSGL Sbjct: 316 KTTNQDSNNLFAESLLKTLTAADRDP------------ETILESIGVDPATYRLRDGSGL 363 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SRHNL+ P ++Q L + H + + L +AG G+LQ R V+ + KTG Sbjct: 364 SRHNLVTPMALIQTLDGMLTHPQGETYRNSLAIAGRTGTLQNR--FQDTPVENQFFGKTG 421 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 ++ V L+G++ + + R +V Sbjct: 422 TMTHVSALSGYLDLPDDSTLLVSILANQTGQSARITRQAIDDVV 465 >UniRef50_B7JUC0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Cyanothece RepID=B7JUC0_CYAP8 Length = 501 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 109/462 (23%), Positives = 204/462 (44%), Gaps = 19/462 (4%) Query: 14 IAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + + A +++ ITQ + ++VQ + + + LPAS K++T AA Sbjct: 54 VCSADVAELINDIITQDKFKRSRWGILVQTLESGDMLYALEKDKYFLPASNVKLLTTAAA 113 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L + G +FRF T + GN + L DP+L + ++N+ LK GV QID Sbjct: 114 LFKFGSEFRFKTPIYISGNFPHL---KTLRLVGKGDPSLTTEKLQNLAKLLKLRGVTQID 170 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFI 190 +++I+ P W W D+ ++ I++ N +++L +P + + Sbjct: 171 -HLIIEAENIDESGINPTWEWEDVHYNYATAVNDLILNENSVTLTLVPQKIGEPLKLEWS 229 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + Q T +G+ + E + LN + G L SEP AV + Sbjct: 230 DPIAAEQWQVNHQAITGKKGTPYSIAIETKLGQPILN---IKGELAIDSEPDQFGLAVVN 286 Query: 251 GASYAGAILKDELKQAGITW-SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 +Y LK L + GI S T+ + + + + +S L L+ + + S N+ Sbjct: 287 PNAYFLETLKTILIREGIGVNSATINQLKKDSNDDKKMTELESENLDKLVTKVNQDSHNL 346 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+++ +++ + R N + + + L Q GV+ + + DGSGLSR NL+ P Sbjct: 347 FAESLLKLLANDRMNKSN-----LEGLNETLTQ-LGVNPISYQLKDGSGLSRQNLVTPEA 400 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 ++ L+ +A+ + + L + G +G+L+ R + G V AKTG+L G L+G Sbjct: 401 LVSTLRLMAKTPDAKTYQQSLAIGGVNGTLKNR--FQGTPIQGIVQAKTGTLLGTSTLSG 458 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 ++ + + F ++ V + R ++ S+L K Sbjct: 459 YLQPPNYPELVFSIMVNQSEVSLPELRQGIDDIIILLSQLKK 500 >UniRef50_Q3SMJ1 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Thiobacillus denitrificans ATCC 25259 RepID=Q3SMJ1_THIDA Length = 488 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 112/461 (24%), Positives = 203/461 (44%), Gaps = 16/461 (3%) Query: 15 AFSVQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQMALPASTQKVITA 69 SV AA + E A +A++VQK+ A P + ++++ PAS K++T+ Sbjct: 29 FSSVPAAELPEGFVAALDTAGIPRERVAVVVQKLDAEQPLLSHNAEAALNPASVMKLVTS 88 Query: 70 LAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AAL QLGP +R+TT L G V +GVL GDLV + DPTL + + + L+ GV+ Sbjct: 89 FAALDQLGPGYRWTTELWLDGPVAHGVLGGDLVVKGRGDPTLTLERMWLLQRALRARGVS 148 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 Q+ G +++DT F + PG + ++A P + + N +V L + Sbjct: 149 QVRGRLVLDTGYFVLPELDPGAFDGEPLALYNALPGPLVANFNAITVHLRP--NGETVRV 206 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG--DLNRFTLTGCLPQRSEPLPLAFA 247 + + V + S++ + ++ G L+ Sbjct: 207 VPDVALPGVDLSSELVLSDEAGCDGWSDGIEPRFTVEGGRALVFGGRYAAACGERSLSLN 266 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 + + A+ + + ++G G V + S PL + L + K S+ Sbjct: 267 LFEPATTFDFMFRGLWAESGGRIDGA-TVFGAVPASAPAL-RFASEPLTEALVRLNKYSN 324 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++ +F +G + P T +DAVR L ++ G+ +I +G+GLSR ++ Sbjct: 325 NLMTRNLFLTLGAEAYGPPATPEKAADAVRASLTRR-GISTRKLVIENGAGLSRIERLSA 383 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 A + Q+L+ + F S LP+ DG+L+ R + + + G KTG+L+ V L Sbjct: 384 AALTQLLRAAYRSPLFAEFESALPIVAIDGTLKRR--FNGSPLAGNAHLKTGTLRDVSAL 441 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 AG++ G+R +FV ++ ++ + L+ + Sbjct: 442 AGYVVDVRGERWSFVMLVNHAQARRSE--AAQRALLEWVQS 480 >UniRef50_Q8ERE3 Penicillin binding protein n=1 Tax=Oceanobacillus iheyensis RepID=Q8ERE3_OCEIH Length = 459 Score = 351 bits (901), Expect = 3e-95, Method: Composition-based stats. Identities = 104/448 (23%), Positives = 181/448 (40%), Gaps = 23/448 (5%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 AG L L V+ ++ PAS K++TA+AAL LGP +RFTT + +G Sbjct: 18 AGGILGLSVRSADTGDIYFSHNGDIRLHPASNMKILTAVAALKILGPGYRFTTEIRLEGK 77 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 + V +GD+ DPTL+ D + L K G+ +I G+++ D + + + Sbjct: 78 LVGDVWEGDVYIVGKGDPTLQLNDYQRFATILHKYGIRKITGSIIADDTWYDDIRLSEDL 137 Query: 152 PWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 W+D + A +A + D + + + + V + + Sbjct: 138 IWSDAQYYYGAEVSALTLSPDKDYDTGSVKIIIKPGQLGDPPEYQLYPNTSYVMIENHAV 197 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 T+ E + + NR + G + + AV Y L + Sbjct: 198 TVDHAEEEELCITRE---HNGNRIYIKGKIGINQDIRKEWMAVWGVTDYVVNTFVQALNE 254 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 GIT V + S L ++L +K S+N I + + + +G + Sbjct: 255 TGITIKDKSKTGRSVPSGTACIHVHSSPTLAEILIPFMKLSNNGIGEMLVKEMGRFVY-E 313 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 GTW AG +++ + Q GV++ I DGSG+S +NL+ + +L I + Sbjct: 314 EGTWEAGLKVMKEQI-QSYGVNMKTLQIKDGSGISHNNLLPANELTHLLHCIQTEEWFPL 372 Query: 386 FISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LPLAG G+L+ R V AKTG+++GV L+G+I + QR+ Sbjct: 373 LLDTLPLAGEQNRMVGGTLRERMKGLS------VKAKTGTIEGVSTLSGYIKMETDQRVI 426 Query: 441 FVQYLSGYAVEPADQRNRRIPLVRFESR 468 F L+ ++ + +V + Sbjct: 427 FSILLNNL-IDGEIGKEIEDEIVTYLHE 453 >UniRef50_A7C340 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Beggiatoa sp. PS RepID=A7C340_9GAMM Length = 405 Score = 351 bits (900), Expect = 4e-95, Method: Composition-based stats. Identities = 117/417 (28%), Positives = 200/417 (47%), Gaps = 16/417 (3%) Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATL 123 K++T AAL L P++RF T +G +NG ++G+LV R G DP L QDI + + Sbjct: 1 MKLVTTAAALHYLSPEYRFKTEFLYQGQRQNGKIQGNLVIRGGGDPRLSSQDIWQIAKQI 60 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 K SG+N+I GN+++D F ++D+AP W + A +A ++ N V + P Sbjct: 61 KASGINEITGNLIVDVHFFDAYDRAPQWETERTQWAYDARLSALALNFNTIVVHVLPGPY 120 Query: 184 PGDM--AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 G A++ A Y + + + +T+ +G + PG + ++G LP +E Sbjct: 121 IGSRLNAWLDPAPAY-IHLRNMTKTIKKGRTTIFAQRSEKEPGQVE-IRVSGNLPSHAEE 178 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + V+ YA + L++AG+ +G + + G + SA L +LK Sbjct: 179 KMIRLNVEHPIRYAAESFRAVLQEAGVKINGETKVVSTA-QFGHKIYEHYSANLSLILKE 237 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 + S+N A+ + + I RF PG+ G +++ L +G + N I+ADGSGLSR Sbjct: 238 LNTYSNNFTAEQIVKTIAAERFGTPGSHAEGLKLMKEFL-HISGANTENVILADGSGLSR 296 Query: 362 HNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 N + + L+ + D +F++ L + G +G +R L + GK+ AKTG+ Sbjct: 297 RNRMTTQAITGFLKEMHSRFDIGPDFLAALRVMGANGVNSHR--LSNSPAKGKIRAKTGT 354 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 L GV LAG+++ Q AF +L+ R E ++ IY+++ Sbjct: 355 LNGVSTLAGYVSNQQNQIFAFALFLNNNRCGSRGA-------DRIEDKIVNAIYEHS 404 >UniRef50_Q3R3H3 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=9 Tax=Xylella fastidiosa RepID=Q3R3H3_XYLFA Length = 498 Score = 349 bits (895), Expect = 1e-94, Method: Composition-based stats. Identities = 114/445 (25%), Positives = 190/445 (42%), Gaps = 17/445 (3%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + G+ +AL V+ ++ A PAS K++T +A LG D++F T+L Sbjct: 55 NKSTDGSLVALTVRDGKTGDVLYARNTWSRASPASNLKLVTLYSAFSVLGSDYKFETSLM 114 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 T G + G L G+L + DPTL D + L G+ +IDGN+++D + F S Sbjct: 115 TDGTQKEGHLSGNLYLKGTGDPTLSADDYDRLAKDLAARGIRKIDGNLVLDDTSFDSIAL 174 Query: 148 APGWPWNDMTQCFSAPPAAAIV----DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ 203 GW +D + FSA +A D N SV + + + + Sbjct: 175 GSGWMIDDEDKYFSAQISALTFSPNADFNAGSVIIDVSAAG---TENSTPKITVLPRNNV 231 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 V+ + R N ++G + L +V + I + L Sbjct: 232 VKVINRVVNGNTSAVTVSRARGSNDIYVSGTVKAGDSIQELC-SVWMPSLIVSDIFQTAL 290 Query: 264 KQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARF 323 K+ GI +G + ++ +QSAPL L+ ++K S++ +A+ + IG Sbjct: 291 KRHGIEVAGHAVVGQATPMQALMLVRRQSAPLESLVIPLMKLSNDTMAEIFLKSIGRKSL 350 Query: 324 NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE 383 N G+ AG A +L G++ + + DGSGLSR+NLI + +L + Sbjct: 351 NQ-GSASAGIQATLSVLAMD-GINSESLVQVDGSGLSRYNLITSRILTDILLAARKKPWF 408 Query: 384 LNFISMLPLAGY-----DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 F + LP+AG G+L+ R + +GKV AKTGSL GV +L+G++T A Sbjct: 409 AAFYASLPVAGQPDRLIGGTLRNR--MRGTAAEGKVIAKTGSLTGVSSLSGYVTAADEYP 466 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLV 463 + F L+ + + + Sbjct: 467 LVFSILLNNLIISADQTEDTLAETL 491 >UniRef50_A4SLJ6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Aeromonas RepID=A4SLJ6_AERS4 Length = 481 Score = 348 bits (892), Expect = 3e-94, Method: Composition-based stats. Identities = 166/471 (35%), Positives = 253/471 (53%), Gaps = 10/471 (2%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 R +IG + + V V P G A++VQ G ++ M PAS Sbjct: 1 MQRLLIGFCALFSTLVPT-LVQAATLTPPKGGQYAIIVQ--GNGGIEFARNADDMIAPAS 57 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVENG-VLKGDLVARFGADPTLKRQDIRNMVA 121 T KV+TALAA ++LG DFRF T ++ + + G + GD+ F DPTL R D+ + Sbjct: 58 TMKVLTALAARLELGADFRFATDIQAQPGAKQGDAINGDIWINFVGDPTLSRMDLLALFK 117 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 L GVN+I GNV ++T + +++ GW W D T CF+AP ++ I+D+NC ++ +A Sbjct: 118 QL---GVNRIKGNVYVNTGAYNGYERGNGWSWGDQTLCFAAPVSSVIIDKNCAYATI-TA 173 Query: 182 PKPGDMAFIRVASYYPVTM-FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 + G A VA+ P+ + +V + G Q+C L+V N + L GC+ E Sbjct: 174 TQIGRPATGNVATGVPIGIGTDRVDVMSYGDMARQFCALEVDMAKGNFYELKGCITPNKE 233 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 P L FA+ D ++ ++ + +AGI G L + + + S L +L Sbjct: 234 PQGLRFAIHDVEAWGWDNIRWAMDRAGIAHEGLLQVTHKAPGSAETLGTHYSVSLPIMLS 293 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 MLKKSDN+ ADT + +G +N PG++R+G+ AVR IL +Q G+D+GN +ADGSGLS Sbjct: 294 KMLKKSDNLYADTFLKTVGRHYYNKPGSYRSGTMAVRAILTKQ-GIDLGNATLADGSGLS 352 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 HNLI+ M+ VL +I ++D EL I +LP + DG+L +R + + +V AKTG+ Sbjct: 353 AHNLISARQMLSVLNFIQKNDAELGLIKLLPSSQVDGTLAWRRSVTAPMMKNRVHAKTGT 412 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 + G NLAGFI T GQR AFV + G + +PA R + +++ Sbjct: 413 ITGTSNLAGFIDTVGGQRKAFVMFQRGLSQDPATHERYRASKAPWPWTVFE 463 >UniRef50_A4FLH3 Penicillin binding protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FLH3_SACEN Length = 512 Score = 347 bits (891), Expect = 4e-94, Method: Composition-based stats. Identities = 122/459 (26%), Positives = 197/459 (42%), Gaps = 22/459 (4%) Query: 15 AFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 ++D+ + G++ ++V+ + A PAS K++TA AAL Sbjct: 18 GPDALRVDLDKILADPRLDGSHAGVVVRDPETDEVLYSSQADARATPASNAKLLTAAAAL 77 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 LGPD+RF T + T G VL+GDL R DPT+ D + A + +SGV ++ G Sbjct: 78 EALGPDYRFRTDVLTDGQQRGPVLQGDLFLRGTGDPTMLAADYDRLAAQVAESGVREVKG 137 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDM 187 + D F GW W+D ++AP +A V D V + Sbjct: 138 KLRTDAGAFDDVPLGSGWAWDDEPYYYAAPISALTVAPNTDFDAGTALVRATPGAEGEPA 197 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 + + + ++ T GSA A E + NR ++G +P + Sbjct: 198 EVALEPATAVLEIDNRTTTSAPGSAPALSVERE---HGGNRVVVSGSVPAGGPVVEDFST 254 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V D A+YAG + L G+ G + + E +A + S PL DLL +K S+ Sbjct: 255 VPDPAAYAGDVFARALAAHGVQVGG--VAPGRTPEGARSLAGRDSMPLRDLLVPFMKLSN 312 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N A+ + + +G + GTW G + + + L GVD + DGSGLS + + P Sbjct: 313 NGHAEVLVKAMGR-QATGTGTWGGGIEVLNEKLNG-LGVDSKVMRMVDGSGLSTMDAVTP 370 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 + +L Q + LP+AG G+L+ R + V AKTGSL Sbjct: 371 RQLALLLDNARQRPWFQVWYDSLPVAGNADRMVGGTLRSR--MVGTPGQDNVHAKTGSLT 428 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGY-AVEPADQRNRRI 460 GV +L+G++T A+G+ + F + + + P D + Sbjct: 429 GVTSLSGYVTAANGRPLVFSVVFNDFVSSSPKDLEDAIA 467 >UniRef50_A5EWP7 D-alanyl-D-alanine carboxypeptidase C, S13 family n=1 Tax=Dichelobacter nodosus VCS1703A RepID=A5EWP7_DICNV Length = 460 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 100/466 (21%), Positives = 198/466 (42%), Gaps = 12/466 (2%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + IA + A VD A +++++VQ V + P ++ + + PAST K++ Sbjct: 1 MLTFPAIAQQIPVAIVDLLNKHHLAQEDVSVVVQNVRNTVPLVNLNDTTLRAPASTAKLL 60 Query: 68 TALAALIQLGPDFRFTTTLETKG-NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 T A LI++ D+R+ T NGV +G+L + G DP L + + M+ L+ Sbjct: 61 TTAAGLIRMSADYRWQTEFYLDKLPDANGVSQGNLYIKGGGDPFLVEEQLTQMLQALRDQ 120 Query: 127 GVNQIDGNVLIDTSIFASHD--KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 G+ I GN+++D S++ + ++A P +V+ V + Sbjct: 121 GLRHITGNIVLDMSLYQLPPEERDAAAFDGHPLSAYNAIPNPLMVNFRTIKVQIVPQGDR 180 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP--GDLNRFTLTGCLPQRSEPL 242 + + + T+ +Q+ + + + ++ R ++G Sbjct: 181 A-VRLLLSPNIANWTIENQLTISNKSCQKNYAPNVALIREENGFARLQVSGAYSTACGAC 239 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 L A+ + + + Q G ++ G+ V + + + S PL + ++ M Sbjct: 240 ELTLALGEASEQFYYLFYQIWHQLGGSFDGS-GTIATVPKTAKIYYTGLSLPLAEQIQKM 298 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 + S+N++ + +G + P +G AV + LRQ GV + + II +GSGLSR Sbjct: 299 NQLSNNVMTRQLMLTLGAFAYGQPANLESGRRAVLETLRQ-FGVPLEHAIIDNGSGLSRQ 357 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 ++ + +L + + FIS L +AG+ G+L+ R + G++ KTG++ Sbjct: 358 TRVSAGDLATLLFKMYHSEYADTFISSLAVAGHSGTLKKR--FRGEKLAGRIYGKTGTID 415 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 V + AG++ +G V +G A R + + R+ Sbjct: 416 EVRSFAGYLLAENGNTYIVVIITNGKT--AAAGRPFQDDVFRWVDT 459 >UniRef50_D0MDV4 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Rhodothermus marinus DSM 4252 RepID=D0MDV4_RHOM4 Length = 477 Score = 347 bits (890), Expect = 6e-94, Method: Composition-based stats. Identities = 126/467 (26%), Positives = 201/467 (43%), Gaps = 34/467 (7%) Query: 15 AFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 A + A +++ L A L V V + + +++Q LPAST K++T AAL Sbjct: 22 APASLEARLEDVRATLSTEQAFWGLYVADVESGRVLVAQNAEQGLLPASTHKLLTTAAAL 81 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------IRNMVATLKKSG 127 LGPD+R+ T L G V+ L+GDL+ R DPT +R L + G Sbjct: 82 DLLGPDYRYQTVLYFVGQVDGATLRGDLILRGSGDPTFGSPSWPGPDPLRTWAQELARMG 141 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQ----CFSAPPAAAIVDRNCFSVSLYSAPK 183 + +I+G ++ D + F A GW + +T N + + + Sbjct: 142 IRRIEGRLIGDDNRFDDRPYADGWDIDYVTTQINLGLGFAVGGLSYHDNIVRLHMQATRP 201 Query: 184 PGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP 243 +AF + Y +T+ ++ T R EA E + LTG +P Sbjct: 202 GAPLAFTQEPFDY-LTIENRAYTAARRYGEAIRIERAFAS---EQVRLTGSVPATYRG-T 256 Query: 244 LAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT-----VVASKQSAPLHDL 298 + V + YA A + L+QAGIT + L ++ P + S PL ++ Sbjct: 257 IELPVANPTRYALAAFRHYLEQAGITVAAELFDVDELPAPPRYDRRHALLVHFSPPLAEI 316 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 ++++ +S N A+ VFR + G+ + +R L Q+ G+D I DGSG Sbjct: 317 VRVINHRSHNFYAEQVFRTLS-----PDGSAEGAARRIRAFL-QRQGIDTRGLTIRDGSG 370 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-YDGSLQYRAGLHQAGVDGKVSAK 417 LSR NL+ PA + Q+L + H N F++ LP G +L+ R V AK Sbjct: 371 LSRKNLVPPAVLGQLLVAMQHHPNRDAFVASLPQGGTRRSTLEDRLRDVP------VRAK 424 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 TGSL V L+G++TT G +AF + + + +VR Sbjct: 425 TGSLLHVRTLSGYLTTRDGHTLAFALMANNFTTPSSRIVRTLDEMVR 471 >UniRef50_C7HZN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Thiomonas intermedia K12 RepID=C7HZN5_THIIN Length = 501 Score = 345 bits (886), Expect = 2e-93, Method: Composition-based stats. Identities = 113/467 (24%), Positives = 183/467 (39%), Gaps = 21/467 (4%) Query: 3 FSRFIIGLTSCIAFSVQA----------ANVDEYITQLPAGANL-----ALMVQKVGASA 47 RF+I + + A + + Q A + A ++Q + + + Sbjct: 25 RRRFLISSLAVTGMPLLARAQQVGLGGSGALPAGVAQALETARIPQQSCAFVLQPLDSPS 84 Query: 48 PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGA 107 P I ++ + PAS K++T AAL LGP + + T + G + GVL+GDL Sbjct: 85 PQIAFNGAALMNPASVLKLVTTYAALRILGPAYVWKTPVYATGPIRAGVLQGDLAFVGSG 144 Query: 108 DPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 DP L ++ ++ L+ G+ +I G+VLID F PG D T ++ P Sbjct: 145 DPHLMADNLWSIAVRLRDLGIRRIRGDVLIDRQAFDLPPHNPGAFDGDATAPYNVGPDPF 204 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 +V+ + + + + + L + +L Sbjct: 205 LVNFGVLRLGFVPDAQGQQVRVTVEPPVAGFDLR-EAPKLTSAACGNWKDKLRADWKQPF 263 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGA-SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV 286 G P A + +Y +L Q GI W G + + T Sbjct: 264 APRFAGGFAAACGPQTWNIAPEVSDNAYVQRLLAALFAQVGIDWKGRVRTAN-LPAGATE 322 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 + S L L++ + K S+N++A VF + TW AV Q L + Sbjct: 323 LTVWDSPALAVLVRDINKYSNNVMAQQVFLTLALQAGAQRATWGLAQQAVEQWLSTH-NL 381 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLH 406 + ++ +G GLSR I+ A + +L+ FIS LPLAG DG+L R Sbjct: 382 SMPGLVLDNGCGLSRIARISAADLNALLRSAWNSPVMPEFISSLPLAGEDGTL--RRHFR 439 Query: 407 QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G++ AKTGSL GV +LAG+ T +GQR F ++ A Sbjct: 440 DPDTAGRIHAKTGSLDGVLSLAGYAQTRAGQRYTFAALVNDPRAGGA 486 >UniRef50_A6G894 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G894_9DELT Length = 543 Score = 345 bits (885), Expect = 2e-93, Method: Composition-based stats. Identities = 106/462 (22%), Positives = 197/462 (42%), Gaps = 14/462 (3%) Query: 13 CIAFSVQAANVDEYI--TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 A A++D + + +GA + + V + + + + PAS K++T Sbjct: 86 SAAAGSLRADLDALVDGARDLSGAQIGVSVVDLASGEVLYAREADRALNPASNAKLVTTA 145 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 AAL LGP+ R++T + T G ++ +GVL+GDL + G DP+L ++ + L +G+ Sbjct: 146 AALSILGPEHRYSTRVWTAGTIDADGVLQGDLYLQGGGDPSLVTGEVYELAGQLVAAGLT 205 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 ++ G +++D + F PG+ AP A V+ N F V Sbjct: 206 RVKGKIIVDATRFDGDGWPPGFEQKSEFASHRAPGGAMSVNYNTFEVHARPGAVGASPTL 265 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + + + S+ T+ + G T G + + + V Sbjct: 266 RLLPEVDDLALESKATTVAGKRNK--LWVSTREEGGKTVVTFHGEIGTEAPAASYRYPVA 323 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQ-TQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 D + YAG +L L+Q G+ Q +V + ++A+ +S L L + + K S+N Sbjct: 324 DPSRYAGELLALSLRQRGVKLGNKARAQSGEVPKDARLLATHRSETLSQLCRSVNKWSNN 383 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 +A+ + R + T + +R+ + GV+ ++ +GSGL +N I+PA Sbjct: 384 FMAEQILRTL---EPGDGATAEQALERMREYTKS-IGVEQSGLVLGNGSGLYDNNAISPA 439 Query: 369 TMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 M Q+L + ++++ L + G DG+ + R LH + G V KTG+L V L Sbjct: 440 AMTQLLAAVYADFRIRSDYLASLAVMGKDGTTRSR--LHDSQAGGWVRVKTGTLDDVSAL 497 Query: 428 AGFITTASGQRMAFVQYLSGYAVE-PADQRNRRIPLVRFESR 468 +G+ +AF ++G + R + L + Sbjct: 498 SGYAGAQGKDPIAFSILMNGLERKQRRQARALQDALAERIAA 539 >UniRef50_Q2Y6G5 D-Ala-D-Ala carboxypeptidase PBP3. Serine peptidase. MEROPS family S13 n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6G5_NITMU Length = 548 Score = 343 bits (881), Expect = 6e-93, Method: Composition-based stats. Identities = 107/515 (20%), Positives = 198/515 (38%), Gaps = 56/515 (10%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGA-----NLALMVQKVGASAPAIDYHSQQM 57 + L + A ++ + + A A + + V + GA P + ++ Sbjct: 39 IKWALCSLLVFLPPPALALDLPDSVKYALARAGIPRSAVGIYVHETGAGQPLLAVNAGVG 98 Query: 58 ALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 PAS K++T A L LGP + + T L G V L G+LV + DP L ++ Sbjct: 99 MSPASVMKLLTTFAGLELLGPGYAWKTELYADGIVRGDALHGNLVIKGYGDPRLNLENFW 158 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 + L+++G+ +I G++++D+S F + ++ P A +V+ ++ Sbjct: 159 LLTRRLRQTGLREITGDLVLDSSHFDLPGSDSAAFDGRPYRAYNVLPEALMVNYRTLALR 218 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG------DLNRFTL 231 L P+ + + + + + + TL G+ +L T Sbjct: 219 LLPQPESRSVRIVVDPLLPSLDLKNSL-TLTNGACNDWKDDLGTDIQFATGLDSRVSVTF 277 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 G L +V D A Y + + +Q G G++ R E + + Q Sbjct: 278 KGSYALACGEKTLFLSVHDTARYTFDLFRQLWEQQGGVLRGSVRRSA-APEGIVPLETHQ 336 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARF---------------------------- 323 S PL D+++ + K S+N A ++ +G Sbjct: 337 SPPLTDIVRDINKFSNNTAARQLYLTLGLGSGPFREPQVMPASFNIGYGNDRTAKSGTIL 396 Query: 324 ----------NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 T A+RQ L + V I+ +GSGLSR+ I+ M ++ Sbjct: 397 SLDGIGEDPDPSRATLAKSETAIRQWLASRQLV-FPELILENGSGLSRNERISAGHMGKL 455 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 L Q F+S LP+ DG+++ R L+++ + G+ KTG L+GV +AG++ Sbjct: 456 LLAAFQSHVMPEFVSSLPIVAVDGTMKKR--LNRSAIAGQAHIKTGLLEGVKTIAGYVRD 513 Query: 434 ASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 SG+R V +++ E L+ + Sbjct: 514 KSGRRSVVVFFINHPRAENGQ--AAMDALLDWVYE 546 >UniRef50_Q0KE47 D-Alanyl-D-alanine carboxypeptidase, S13 family n=6 Tax=Burkholderiaceae RepID=Q0KE47_RALEH Length = 533 Score = 343 bits (879), Expect = 1e-92, Method: Composition-based stats. Identities = 112/464 (24%), Positives = 199/464 (42%), Gaps = 16/464 (3%) Query: 16 FSVQAANVDEYITQLPAGANL-----ALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 ++ +A V + A + + V ++GA +++QQ PAST K++T Sbjct: 72 PALVSAGVPTPVAAALRRAGVPASAASFYVVRLGAGTARASWNAQQPMNPASTMKLVTTF 131 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 A L LGPD+R+ T+L +G + G++ R DP L +++ +VA + G Sbjct: 132 AGLQLLGPDYRWQTSLYADAQPGFDGTVNGNVYLRGHGDPKLVPEEMAKLVAKARAGGAT 191 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 I+G++++D S FA G ++ + ++ P A + S +L P +A Sbjct: 192 GINGDLVLDRSYFADGLDGNGTIDGEVQRAYNVGPDALLYAFKTLSFTLTPDPASQTVAV 251 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL---TGCLPQRSEPLPLAF 246 + + +++ + Q V + L +G L Sbjct: 252 SVTPELAQLKLDNRLTLTNGRCGDWQSSASPSVLPQADGTVLASFSGDYASDCGEHVLNI 311 Query: 247 AVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 A A + E ++AG ++ LR +V ++A PL D+++ + K Sbjct: 312 ATLSHAEFTWGGFVAEWQRAGGRFAHMPALRSGKVPRGAVLLARHYGLPLADIVRDINKF 371 Query: 306 SDNMIADTVFRMIGHA-RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 S+N++A +F IG P + V++ L +Q G+D+ ++ +GSGLSR Sbjct: 372 SNNVMARQLFLTIGAEMDRGGPASTGRSIRVVQRWLARQ-GLDMPGLVLDNGSGLSREER 430 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I+ M ++LQ A + I LP+ G DG+L+ R L +A G KTG+L V Sbjct: 431 ISAYDMARLLQQAAASNVGPVLIDSLPVLGVDGTLRNR--LTRANAAGNGYLKTGTLADV 488 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 LAG++ A G R V ++ A L+++ R Sbjct: 489 RALAGYVDAADGGRYVVVSMINHPN--AAQALEAHDALLQWVYR 530 >UniRef50_A1S6E3 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6E3_SHEAM Length = 554 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 154/477 (32%), Positives = 238/477 (49%), Gaps = 19/477 (3%) Query: 6 FIIGLTSCIAFSVQAANVDE-----YITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 F S I + + + + Y+ P N+A++ + I +S++ LP Sbjct: 84 FFADTPSSIPPASSLSPLKDIAPAWYLAIKPKQTNVAVLAVDLKTQQVIISDNSERAMLP 143 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS QK++ ALAA LGPDFRF T L +G + VL+ L F DP L ++ ++ Sbjct: 144 ASVQKLLLALAAQHTLGPDFRFHTQLFVQG-FKPPVLE-RLYIGFSGDPLLTSAELSALL 201 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 +LK+ GV I+ L+ S DKAPGW W+D+ C+++P A +D+NC SL Sbjct: 202 GSLKQQGVRTINQVYLV--SAVDKSDKAPGWVWDDLGVCYASPVAEFSLDKNCVKASLRP 259 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 K GD ++R+A +++ +Q+ P S + L VV NR+ L GC + Sbjct: 260 TEK-GDGTYVRLAKDAAISIENQLNYRPGASFKECSPHLSVV--GPNRYLLHGCYS-GKQ 315 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 LPL+ AV D ++ + LK AG S T R + ++A QSA + LL Sbjct: 316 ALPLSIAVTDTDAWLQEKVAGLLKAAGFN-SHTPKRLHTLPANAHLIADHQSATMDSLLS 374 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 MLK+SDN+IAD + + +G + + GS + L GVD+ + + DGSGLS Sbjct: 375 EMLKESDNLIADALLKQLGKRKGQDESDFYQGSKEMAANLT-LLGVDLSSANLVDGSGLS 433 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R+NL+ +MQ L I + + LP++G DG+L Y+ G + + +V AKTGS Sbjct: 434 RYNLLNARQLMQTLLLIHHTEAYASLKDGLPVSGKDGTLLYKRGFNSLPLKDRVQAKTGS 493 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 +QGV NLAGF+ + + AFV +G + R+ F + L K + Q+ Sbjct: 494 MQGVSNLAGFLRSGD-REYAFVVLENGLVEPESQNGKRKPG---FAATLLKALLQHE 546 >UniRef50_Q6MIC0 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Bdellovibrio bacteriovorus RepID=Q6MIC0_BDEBA Length = 436 Score = 342 bits (878), Expect = 1e-92, Method: Composition-based stats. Identities = 98/410 (23%), Positives = 186/410 (45%), Gaps = 5/410 (1%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 +D + +M +PAS K+ TA A L P +F T L T G++++G LKG L + G Sbjct: 19 KTLLDVNGNKMMVPASISKIATASAVLASFPPGTKFKTQLLTSGDLKSGTLKGTLYLKGG 78 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 DP+ +++ +V ++ + +I+G++++D S+F + + + AP A Sbjct: 79 GDPSFVSENMWYLVNAFTRTKIKKIEGDIVVDDSLFDRVRYDLSRQKERVDRAYDAPVGA 138 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 + N ++ + + + + ++ +T+ + + Sbjct: 139 MSFNWNSVNIFVRANGAGNGAEVTIDPENDYIRLVNKAKTVSGSANNLLADRDEDKKFPG 198 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV 286 + + G + Q + + + + +AG LK L Q GI +GT+ R E + Sbjct: 199 DVIHVGGSIGQGLKEVVVFKNITQPDLWAGYNLKAFLAQRGIQLTGTI-RNGVTPEKAEL 257 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 VA +S P+ ++ M K S+N +A+ + + +G + T G + + + Q GV Sbjct: 258 VAESESKPIEQMVADMNKFSNNYVAEMLTKNLGAVKKTKGATLADGVLVINEHM-QSLGV 316 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGL 405 + SGLSR N ++ M +VLQ++ + F++ LP+AG DG+L+ R + Sbjct: 317 PAEQYNLQSPSGLSRQNKLSSFAMWKVLQHLRNDFRVQPEFLTSLPIAGVDGTLKKR--M 374 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 + + V AKTG L GV +LAG+ G+ + F +G E + Sbjct: 375 KNSPAERWVRAKTGFLTGVVSLAGYAGLEDGRVVTFSFVYNGSTDETKIR 424 >UniRef50_A1VU15 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=15 Tax=cellular organisms RepID=A1VU15_POLNA Length = 528 Score = 342 bits (878), Expect = 2e-92, Method: Composition-based stats. Identities = 100/433 (23%), Positives = 178/433 (41%), Gaps = 21/433 (4%) Query: 48 PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGA 107 P + + + PAS K++T A L LGP + ++T + G + NGVL G+L+ + Sbjct: 97 PLLSWRAGSAMNPASVMKLVTTYAGLELLGPAYTWSTPVYADGPIANGVLSGNLIIQGRG 156 Query: 108 DPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 DP L + + ++ ++ G+ I G++L+D S FA+ + PG + + ++ P A Sbjct: 157 DPKLVMERLWLLLRRVQGLGIKTITGDILLDRSAFAASTQHPGDFDGEALRPYNVQPDAL 216 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR-------GSAEAQYCELD 220 +++ ++ P G + V M V +L Sbjct: 217 LLNYKSVVMTFAPNPGSGSASISYDPPLAGVRMQPGVPLSAGSNGRAGLAECGDYRAQLQ 276 Query: 221 VVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV 280 D R G P A A D ASYA + ++ G T G + R Sbjct: 277 PDFADPLRMAFAGSYPAACGEKVWAIAYPDPASYAQRAIAGLWQEMGGTLGGQV-RDGVA 335 Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 +SA L ++++ + K S+N++A +F + R + A +AVR Sbjct: 336 PPGLAPAFEMESASLAEIIRDINKFSNNVMAQQLFLTLSLQRPGG-ASNEASREAVRGWW 394 Query: 341 RQQAGV-------DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 + + G ++ +GSGLSR + P + ++LQ ++ LP++ Sbjct: 395 QGRFGAQNGGPGNAPDMPVLDNGSGLSRLERVTPQGLARMLQTAYVSGAMPELMASLPIS 454 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G DG+L+ G K+G+L+ LAG++ T SG+R+ V ++ A Sbjct: 455 GVDGTLK---RSKSQVSQGWAHLKSGTLRDATALAGYVHTPSGRRLVVVGIVNHANAPAA 511 Query: 454 DQRNRRIPLVRFE 466 R LV + Sbjct: 512 --RPALEALVDWA 522 >UniRef50_B1XWZ8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Leptothrix cholodnii SP-6 RepID=B1XWZ8_LEPCP Length = 474 Score = 342 bits (877), Expect = 2e-92, Method: Composition-based stats. Identities = 115/439 (26%), Positives = 191/439 (43%), Gaps = 13/439 (2%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 QLPA + L + G + + + Q+A PAS K++T+ AAL QLG F++ TTL Sbjct: 41 AQLPADSLY-LWIAPAGGGEARLSHQAGQLAHPASLMKLVTSAAALQQLGRSFQWHTTLH 99 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 G GVL G L + G DP L + + ++ +++ G+++I G++++D S +A + Sbjct: 100 LDGTPRQGVLAGSLHIKGGGDPKLVPERLWLLLRQVQQLGIDEIRGDIVLDRSAYALPEI 159 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 P + + ++ P A +V+ ++ P G + + T VR L Sbjct: 160 DPAAFDGEPLKPYNVRPDALLVNYKSITLGFRPDPARGVASVSAEPALAGWTPPDSVR-L 218 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 G L R+ LTG P A + ASYA +++ + + G Sbjct: 219 SDGPCNDWRAGLQADFSSPQRWRLTGSYPLACGERNWPIAYNEPASYAARVIEAQWRALG 278 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 G + R+ V A+ S PL ++++ M S+N IA + + +P Sbjct: 279 GRLQGRV-REGLVPAGLPETAAFLSPPLAEVMRDMNLHSNNQIAQQMLLALS---PQLPA 334 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFI 387 T+ A V +L G D + +GSGLSR I P + + LQ+ + + + Sbjct: 335 TFEAARQPVANLLGA-VGCDSAELRLDNGSGLSRDERITPRCLGRWLQWSWRQPWMPDLL 393 Query: 388 SMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LPLAG +G+ + V G+ KTGSL V +AG + A GQR V L+ Sbjct: 394 GSLPLAG-EGTAR-----RAFSVAGRAHLKTGSLANVAAIAGVVHGADGQRQVVVAMLNH 447 Query: 448 YAVEPADQRNRRIPLVRFE 466 R ++R+ Sbjct: 448 PQASRDGARQVLDAVLRWS 466 >UniRef50_Q082P9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q082P9_SHEFN Length = 554 Score = 341 bits (875), Expect = 4e-92, Method: Composition-based stats. Identities = 151/478 (31%), Positives = 241/478 (50%), Gaps = 42/478 (8%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 PA + L + V + +Y++Q + PAS QK++TALAA QLG DF + T L T Sbjct: 81 PAHSQLGITVWDMTTQKTVFEYNNQSLMQPASVQKLLTALAATKQLGKDFIYQTRLTTLA 140 Query: 91 N-------VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 +ENG+ GD+ F DPTLK QD+R ++A+L + G+ ++ GN+++ TS Sbjct: 141 QQPLDKSLIENGIYSGDIYIEFSGDPTLKYQDLRQLLASLSQLGITELTGNIVL-TSEQD 199 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL----------------YSAPKPGDM 187 S +APGW W+D+ C++AP + I+D+NC L D Sbjct: 200 SQLQAPGWVWDDLGICYAAPISPFIIDKNCVYGRLATTGYNKVANITMMGNRPIEISNDA 259 Query: 188 AFIRVASYYPV------TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 F+ PV T+ V + C+L + D NR+ L+GC ++ Sbjct: 260 YFVTPIVNRPVAKPAVQTLTDAVVLPAYLTESVPQCQLTLSRFDNNRYHLSGC-HVGAKS 318 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-----RQTQVNEPGTVVASKQSAPLH 296 LPLA A+ + YA I+ +L GI + + Q V+AS QSA L Sbjct: 319 LPLAIAITEPQLYAQQIVAKQLASLGIVHQLPITASIMNTEAQFMAQRQVIASHQSAALP 378 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 LL+ ML KSDN+IAD++ + +G + P + A++ IL G+D+ N IADG Sbjct: 379 QLLETMLLKSDNLIADSLLKKLGEVYYQAPSDFARSGQALKTILYS-IGIDLSNANIADG 437 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLSR+NL+ P ++ VL + Q + +LP +G G+L+Y+ +++ + V A Sbjct: 438 SGLSRYNLLTPEHVLSVLTTLYQQPEYRFLLELLPQSGVSGTLRYKRYFNKSPLKNHVFA 497 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIY 474 KTGS+ G+ NLAG + ++G FV + +G + P ++ ++ P F + + + Sbjct: 498 KTGSMLGIANLAGRVNVSNGHDYLFVLFENG--LSPQIKKQQKAP---FSAVFLQTMM 550 >UniRef50_A6LH98 D-alanyl-D-alanine carboxypeptidase n=6 Tax=Bacteroidales RepID=A6LH98_PARD8 Length = 485 Score = 341 bits (874), Expect = 4e-92, Method: Composition-based stats. Identities = 122/496 (24%), Positives = 207/496 (41%), Gaps = 36/496 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQ 55 M L SC+ SV A V + I Q GA+ +L+V+ V Y + Sbjct: 1 MIRKISFFFLISCLYLSV-GAQVPQPIKQFLRKPYMEGASFSLIVKDVHNGETVFAYDTL 59 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + PAS K +T AL LG D+RF TTL G++E G+LKG+L + DP+L Sbjct: 60 RQLTPASVMKTVTTATALEILGEDYRFPTTLAYDGSIEKGLLKGNLYIKGSGDPSLGSAH 119 Query: 116 --------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 ++ ++ LKK G+++I G V+ D SIF + + W DM + A Sbjct: 120 FAPYHKRFLQEWISALKKVGIHKIQGAVIADESIFDTEGTSFKWVGEDMGSYYGAGSYGL 179 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 V N + + L + F T + S+++ + D Sbjct: 180 CVFDNLYKLGLQTGAPGSRPKLKGTEPELSGIHFHNYLTAQQVSSDSSFIVGAPFATDR- 238 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL-------LRQTQV 280 L G +P E PL + D A + L +L+ GIT + Sbjct: 239 --YLYGIVPANREWYPLKGDIPDPALFLADYLTRQLEHEGITVGESPSCFRILREAGRWQ 296 Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG----TWRAGSDAV 336 T + + S L +++++ S N+ AD + + IG G ++ G + Sbjct: 297 PGKRTEIVTTYSPTLREIVEVTNHVSHNLFADALIKTIGLRYTPRKGEVISSFNRGIQVL 356 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA-QHDNELNFISMLPLAGY 395 R + + G+D+ + DGSGL+ N ++ A + +L Y+ + F LP+AG Sbjct: 357 RDYWQGK-GLDLSCVWMYDGSGLAVTNKLSTAFVADLLIYMRTRSQQHTAFYESLPVAGV 415 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQ 455 +GS+ R L + + GK K+GS+ V AG+I ++ A +++ Y+ D Sbjct: 416 EGSV--RNFLKGSSLQGKAHLKSGSMSRVKGYAGYI-NKGDKQYAIALFVNNYSC---DG 469 Query: 456 RNRRIPLVRFESRLYK 471 R + + + +L+ Sbjct: 470 RPMTVAIEKLLLQLFN 485 >UniRef50_C0DW12 Putative uncharacterized protein n=1 Tax=Eikenella corrodens ATCC 23834 RepID=C0DW12_EIKCO Length = 475 Score = 340 bits (872), Expect = 7e-92, Method: Composition-based stats. Identities = 114/458 (24%), Positives = 193/458 (42%), Gaps = 16/458 (3%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + LT + F Q A ++ P A A+ VQ + + + + + PAST K++ Sbjct: 15 LLLTFALFFYFQVAFAIDFGRIQPDEA--AVYVQDLDSGEVLLAHRADVSMNPASTMKLV 72 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 T AAL LG D+R+ T + G V NG L+GDL DP + D+ +M L + G Sbjct: 73 TTFAALRGLGGDYRWQTQWRSSGTVANGALQGDLYWVGSGDPAFDQPDLLDMQQQLVRQG 132 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 + ++G V++D ++ A G+ ND + F PP ++ ++ + + G Sbjct: 133 IVSLNGKVVLDRRVWGGLASAEGFE-NDADESFVVPPDPHMIAYKALWITA-ARNETGQP 190 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 AF+ Y + T G + + G LP + Sbjct: 191 AFLLNPPLYGIQTDLSQLTETDGRCGKLSNHVS-AKFENGMLVFRGRLPAACMGEKMFIN 249 Query: 248 VQDGASYAGAILKDELKQAGITWSGT-LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKS 306 + D +A + G G + ++A+ S L ++L M K S Sbjct: 250 LFDAPRFAEESFRGYWLAQG--LGGLYGFGRGAAPSNSRILATHFSKSLGEVLTDMNKHS 307 Query: 307 DNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 +N+IA +VF +G + N P + + AVR+ L AG+D ++ +GSGLSR + Sbjct: 308 NNLIARSVFLTLG-HQANGPHSVQNAEAAVRRQLVS-AGLDDEALVLENGSGLSRRERLT 365 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 + +L + FI LP+AG DG+L+ R + KTG+L+ V Sbjct: 366 ARFLGSMLFQAYRSPFRDTFIHTLPIAGTDGTLRGRFRQLGRSL----RMKTGTLRDVRA 421 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 LAG+ +G+R+A V ++ + +VR Sbjct: 422 LAGYWLPPNGRRLAVVVIINSHRSGGY--LPDMDAMVR 457 >UniRef50_Q3JVI2 Family S13 unassigned peptidase n=67 Tax=Burkholderiaceae RepID=Q3JVI2_BURP1 Length = 800 Score = 340 bits (871), Expect = 8e-92, Method: Composition-based stats. Identities = 108/439 (24%), Positives = 206/439 (46%), Gaps = 15/439 (3%) Query: 9 GLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 L + + ++Q A V ++L+++V+++G PA+ +++ + PAST K++T Sbjct: 353 VLPASVLVALQRARVPA--------SSLSVVVERIGDRTPAVAWNASRPMQPASTMKLVT 404 Query: 69 ALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 A L LG D+R+ T+ G+V ENG L G L + DP L +++ ++V ++++G Sbjct: 405 TYAGLSLLGADYRWRTSAYADGDVDENGTLHGTLYIKGTGDPKLVPEELIDLVNKIRRAG 464 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 + +DG +++D + FA + +D + ++ P + S ++ G + Sbjct: 465 IVNVDGALVLDKTFFAPQTRDLPPLDDDASAPYNVGPDPLLYAFKALSFTVTPT-DSGAI 523 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 A V + + + +++ +GS +A L + G P P A Sbjct: 524 AVDVVPALANLNVDNRLVEG-QGSCDAARPTLVTDANGELTASFAGDYPPSCGPTTTNLA 582 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 V + +++ +Q G ++SGT+ + +V VAS L ++ + K S+ Sbjct: 583 VLNHSTFFARGFLALWRQTGGSFSGTI-AEGKVPGRARPVASHHGPVLSSVVHDINKFSN 641 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++A +F IG P T +D +R L +G+ + +GSGLSR ++ Sbjct: 642 NVMARNLFLTIGAVEHRPPATPAQSADTIRAFLA-HSGLPTDGLALENGSGLSRDERVSA 700 Query: 368 ATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 + +LQ F+ LP+AG DG+++ R L A V G KTG+L+ V + Sbjct: 701 LGLADMLQAANASPVAQAFVDSLPIAGVDGTMRNR--LTNAPVGGNAHIKTGTLRDVRAI 758 Query: 428 AGFITTASGQRMAFVQYLS 446 AG++ +A G V +++ Sbjct: 759 AGYVASADGSSYVVVSFIN 777 >UniRef50_C1A5P5 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1A5P5_GEMAT Length = 545 Score = 339 bits (869), Expect = 2e-91, Method: Composition-based stats. Identities = 102/463 (22%), Positives = 194/463 (41%), Gaps = 23/463 (4%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 T+ +++ + + +V + + +PAST K+ T+ Sbjct: 84 TTPRGTEALTSDLSTLLGSRTRNGDWGAIVVSISRGDTLFARGADAPMVPASTMKLFTSA 143 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLK--------RQDIRNMVA 121 A +LGP+ F+T + G V+ NGVL GDLV R DP+L + + Sbjct: 144 IAFEKLGPEHTFSTDVLRDGTVDANGVLSGDLVLRGDGDPSLSPRFVRGGPDASMNLLAQ 203 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 +G+ ++ G+++ D S F S GW ++AP +A ++ N V + Sbjct: 204 FTAGTGIKRVTGDIIADASAFESRRIPEGWLSRYAGAGYAAPFSALSLNENIVIVGVTPG 263 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 + +T+ + VRT+ G + + +R ++G + R+ Sbjct: 264 GSGDGAKVFLEPATQALTITNTVRTVAGGGS-----RITARRVGDDRVVVSGTIGARAGT 318 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 + V D +++ + L+ G+ G + + + TVV S S PL L+ + Sbjct: 319 VRYQLVVGDPSTFTAGAFRAALEAQGVKVDGA-TKAGRTSSTATVVTSLPSPPLARLVSV 377 Query: 302 MLKKSDNMIADTVFRMIGH-ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M ++S N+ A+ ++R A G+ + ++ + +Q G DGSGLS Sbjct: 378 MNRESINLYAEMLYRNAARGADKTTVGSAETAATVLKDFMVRQVGAAPDAVTATDGSGLS 437 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 + + P +++Q+L + F + LP+AG L+ R + G + AKTG+ Sbjct: 438 VLDRVTPRSLVQLLDHAHHAQWGSAFHASLPVAGESELLRNR--MRATPAQGNLHAKTGT 495 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V L+G++T +G+ +AF +G D+ + R + Sbjct: 496 TNDVIGLSGYVTAENGEILAFAFLYNG-----KDRWHARETID 533 >UniRef50_D2AVR4 Serine-type D-Ala-D-Ala carboxypeptidase n=7 Tax=Actinomycetales RepID=D2AVR4_STRRD Length = 516 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 122/495 (24%), Positives = 204/495 (41%), Gaps = 40/495 (8%) Query: 4 SRFIIGLTSCIAFSVQAAN-----------VDEYITQL-PAGANLALMVQKVGASAPAID 51 S +I + + A +D+ ++ A ++V+ + Sbjct: 12 SALLIASLAWASAPASAVEPASGVTDLVKDIDQILSDARLTPARAGVVVKSAASGEELYA 71 Query: 52 YHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTL 111 S ++ PAS K++T+ AA LG DFRFTT++ + G L G+L + DPTL Sbjct: 72 QDSGKVLTPASNAKLVTSAAAADTLGLDFRFTTSVLSTGRRAGSALTGNLYLKGTGDPTL 131 Query: 112 KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAI--- 168 D + A + SG+ + G ++ D + F S W W+D ++A +A Sbjct: 132 LAADYDALAARVAASGIKMVTGKLVADDTWFDSVRLGTDWAWDDEPYYYAAQISALTASP 191 Query: 169 ---VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 D VS+ G A + ++ + R + A+ L Sbjct: 192 DTDYDAGTVIVSVAPGDAAGKPAKVSTTPETDY-----LKIVNRATTGAETDVLIERQHS 246 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 N +TG + AV D YA ++ + L + G+ G R+ Sbjct: 247 TNTVLITGTVADG---YDEWVAVDDPTGYAASLFRKALAKHGVRVLGPTAREA-TPAGAA 302 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 VAS+ S PL +LL +K S+NM A+ + + IG GTW AG ++ Q G Sbjct: 303 TVASRDSMPLSELLVPFMKLSNNMHAEILTKSIGRKVSGA-GTWSAGLASLTSF-AQANG 360 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-----YDGSLQ 400 + + DGSGLSR + + P + +L + + LP+AG G+L+ Sbjct: 361 MPT--LRMRDGSGLSRADGLTPGGVTGLLLALRSKPWFSTWYGSLPIAGDPDRMVGGTLR 418 Query: 401 YRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY-AVEPADQRNRR 459 R + G V AKTGSL GV +L+G++T+A + + F L+ + + P D ++ Sbjct: 419 SR--MRGTPAAGNVHAKTGSLTGVTSLSGYVTSADNEPLVFSVMLNQFLSGSPKDIEDKI 476 Query: 460 I-PLVRFESRLYKDI 473 L +F D+ Sbjct: 477 AIRLAQFSRTAPADV 491 >UniRef50_C1FA56 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1FA56_ACIC5 Length = 518 Score = 338 bits (868), Expect = 2e-91, Method: Composition-based stats. Identities = 112/506 (22%), Positives = 199/506 (39%), Gaps = 73/506 (14%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 + A+ + V + AP ++ Q+ PAS K+ T A L + PD R+ T Sbjct: 21 LLAPGVRQAHWGINVTTLA-GAPVYSLNNAQLFHPASNAKLFTTAAVLGLMSPDARWRTQ 79 Query: 86 LETKGNVE-NGVLKGDLVARFGADPTLKR----------------QDIRNMVATLKKSGV 128 + T G V+ G L GDL+ DPTL + M + K G+ Sbjct: 80 VVTSGQVDAKGTLHGDLILLGSGDPTLSGRVYPYGGHTERASDTLAALEQMADEVVKDGI 139 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 ++I+G+++ + + F GW +D+T + AP +A ++ N +++ + + Sbjct: 140 HRIEGDIIGNDTWFTWQPYGAGWAQDDLTWDYGAPISALTLNDNVAYLNIVPQQEAAQLP 199 Query: 189 -----------------FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 P + L R + + + + + Sbjct: 200 NEPGAHPEKLVTPTGTELAEWNPPTPYYYLNNESNLTRATRSYAGIDRRL---GSHTVRV 256 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT------ 285 G + L +A A+ D A YA D L++ G+ G + Q++ T Sbjct: 257 FGNIDAH--GLHVALAIGDPAQYAAQTFADLLRERGVQIDGMARAEHQLSTDTTHFRTES 314 Query: 286 ----------------------VVASKQS-APLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 V+AS S A L +++ LK S N+ A+ R +G Sbjct: 315 ELPIPLHRIPDTVLGPPSGNMHVLASWLSHATLAQDVEVTLKVSQNLHAELYLRDLGRYE 374 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 G++ G+ +RQ + AGV G+ DGSG+S +++ P + +L Y A Sbjct: 375 AG-EGSFAEGARVIRQF-AEDAGVKPGDFFFYDGSGMSHQDVVTPRALTTMLAYAAHQPW 432 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + LP+ G DG+L R G+ +V AKTG+L V +L+G++ T SG+ + F Sbjct: 433 GKLYRESLPVGGVDGTLSDR--FVSPGMRNRVDAKTGTLSEVNSLSGYVRTRSGRTLVFS 490 Query: 443 QYLSGYAVEPADQRNRRIPLVRFESR 468 + + ++R +V + Sbjct: 491 ILCNAHHPGSYEERAVMDRIVDAIAA 516 >UniRef50_Q6W3N7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Alvinella pompejana epibiont 6C6 RepID=Q6W3N7_9PROT Length = 470 Score = 336 bits (863), Expect = 9e-91, Method: Composition-based stats. Identities = 107/473 (22%), Positives = 227/473 (47%), Gaps = 14/473 (2%) Query: 1 MRFSRFIIGLTSCIAFSVQ---AANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQ 56 MR ++ L +++S+ ++ I+ +P + + ++ ++ + + +++ + Sbjct: 1 MRRIISVVTLILSLSYSLYGDIPYELEYRISSIPLSKDSYSIYIKGLDSGQEIASWNTYR 60 Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI 116 PAS K++T A ++ LG D+R+ T G ++NG L G+L+ + DPTLK +DI Sbjct: 61 AMKPASVIKLLTTYAGVLGLGFDYRWETKFFHSGYIKNGTLHGNLIIKASGDPTLKSRDI 120 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 ++V ++ G+ +I G+++ID +IF + + ++A P A + + ++ Sbjct: 121 PSIVDNIQSLGIRKILGDIVIDRTIFQVPWQNSSRFDKNRYSPYNAMPDAMMFNERKSTL 180 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR---FTLTG 233 + + + RV + + ++++ + R + D N+ L+G Sbjct: 181 CVTPKGRG--VRLNRVDNDRSYRVVNRLKVVNRSCKSGYSWPKVTIKTDANQRSTIFLSG 238 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 L +R + V LK E+ + GI + GT L+ +V++ + S S Sbjct: 239 KLSKRCGTRKICKVVSMPHRAFYYALKSEIGRRGIKFLGT-LKLRRVSKRDRYIFSHFSP 297 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 L ++L I+LK+S+N++A +F IG + P S AV+++L+ + + TII Sbjct: 298 TLEEVLPIILKRSNNLVARQLFLTIGTTYYQPPINTLKASTAVKRLLKHRHILADDYTII 357 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 +GSGLSR + ++ T+ +L+ + ++ L +AG DG+++ R + V G+ Sbjct: 358 QNGSGLSRVSRVSTKTLANLLEDAYFN-YGYRWLDSLSIAGIDGTIRRR--FQNSSVYGR 414 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFE 466 KTG+++ V N+AG++ SG++ + ++ R ++ + Sbjct: 415 AWMKTGTIKSVANIAGYVEGISGEKFVVIVLVNSPKSSQYG-RELANRVIEWV 466 >UniRef50_C1YFR4 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=2 Tax=Actinomycetales RepID=C1YFR4_NOCDA Length = 545 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 123/463 (26%), Positives = 193/463 (41%), Gaps = 24/463 (5%) Query: 16 FSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + A++D + G + V A S + +PAS K+ TA AAL Sbjct: 56 LTDLRADIDALLADPSLEGGVSGVTVTDPATGAVLYSRDSGEQLVPASNMKLFTAAAALD 115 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 LG D F+T + +G+ + ++ DL G DPTL QD+ + A + SGV + G+ Sbjct: 116 VLGADHTFSTEVVAEGHRQRRSVE-DLYLVGGGDPTLSEQDLDALAADVAASGVRTVRGD 174 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV------DRNCFSVSLYSAPKPGDMA 188 VL D + F S W D +SA +A V D V + Sbjct: 175 VLADDTWFDSQRLVDDWWPEDEPYAYSAQISALTVAHGERYDTGVTEVVVTPGAAGAPAT 234 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 A+ + +Q T P G + + P N T+TG +P + P+ V Sbjct: 235 VDLGAAEGYAELDNQAVTGPPGGTSSVVVD---RPVGTNTITVTGTIPADAAPVTALRTV 291 Query: 249 QDGASYAGAILKDELKQAGITWSGTL---LRQTQVNEPGTVVASKQSAPLHDLLKIMLKK 305 + A AG + L++ G+T G + + +VA +S L ++L +K Sbjct: 292 DEPAGLAGHLFAQALERHGVTVEGGVEFGEAPGRGRHGARLVADHESPELAEILVPFMKF 351 Query: 306 SDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLI 365 S+N A+ + + IG G+W AG V + L GVD + ++ DGSGLSR NL+ Sbjct: 352 SNNGHAEMLVKSIGQEVAG-EGSWDAGLTGVERSLAG-LGVDTSDLVLNDGSGLSRGNLV 409 Query: 366 APATMMQVLQYIAQHDNELNFISMLPLAGYD-----GSLQYRAGLHQAGVDGKVSAKTGS 420 T++ +L + LPLAG G+L R + G VSAKTG+ Sbjct: 410 TSDTVVDLLVSTRDASWHGVWADSLPLAGESDPFTGGTL--RFRMGGTAAAGVVSAKTGT 467 Query: 421 LQGVYNLAGFITTASGQR-MAFVQYLSGYAVEPADQRNRRIPL 462 + G+ L+G++ G +AF +GY I + Sbjct: 468 MTGISALSGYVAGQGGGDGLAFSVVNNGYGGPAPTPVQDAIAV 510 >UniRef50_B8HV28 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HV28_CYAP4 Length = 490 Score = 336 bits (862), Expect = 1e-90, Method: Composition-based stats. Identities = 112/463 (24%), Positives = 198/463 (42%), Gaps = 17/463 (3%) Query: 14 IAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + + + + ++VQ +G + Q +PAS K+ T AA Sbjct: 33 ICPAQLDQAIAAIVNRPEFRRGRWGIVVQTLG-GKTLYSQAADQYFIPASNVKLFTTAAA 91 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L+++G FR+ T +G+ G +L DPTLK+ D+ + A L + GV +I Sbjct: 92 LLRMGAKFRWITPFYARGS---GATLAELRVVGQGDPTLKQTDLEQVAADLHRQGVRRIR 148 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAFI 190 + D S+ + P W W D+ + P + IVD N ++L +P + F+ Sbjct: 149 QLQVEDRSL-DTTGINPTWEWGDLQSANAVPVSRLIVDENTIGLNLLPQAIGQPLQVQFV 207 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +Q RT+ E + D++ +TG L S P P AV + Sbjct: 208 DPEAAAQWQVVNQSRTVTGQEPEWIEVQRDLIRP---ILRVTGQLRVGSTPEPAFVAVLE 264 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV--VASKQSAPLHDLLKIMLKKSDN 308 + + L+ L++ GI +++ + + + +A S PL +++ + S+N Sbjct: 265 PSRHFLTKLQAALRKQGIKVDQAIVQASPSEDKQNLYRIAHLSSPPLAEVIATTNQDSNN 324 Query: 309 MIADTVFRMIGHARFNV--PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 + A+ + + P T A + Q GVD + DGSGLSR NL+ Sbjct: 325 LYAEALLESLLAQAGGTVSPPTPEADPLTILQSTLATVGVDPQAYQLQDGSGLSRRNLVT 384 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 P +++Q+L+ + F + L +AG G+L R L GK+ KTG+L V + Sbjct: 385 PTSLIQLLEGMHAFPQADIFRASLAVAGQTGTLAQR--LRGTVGAGKLQGKTGTLSAVVS 442 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 L+G++ + F ++ V + R LV +RL Sbjct: 443 LSGYLNPPRFSPLVFSVLVNQTGVANSQVRQAIDELVVVLTRL 485 >UniRef50_Q2S3M3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Salinibacter ruber DSM 13855 RepID=Q2S3M3_SALRD Length = 477 Score = 335 bits (860), Expect = 2e-90, Method: Composition-based stats. Identities = 117/481 (24%), Positives = 192/481 (39%), Gaps = 36/481 (7%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQQMALPA 61 I+ + A + I L A A + + + + + + + LPA Sbjct: 11 ILLAVVSLPTEALAQPLPARIDSLLQERRAAHAFWGVSIYDLEGDSLLYERNGDRGFLPA 70 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN--- 118 S QK+ T AAL LGP+ R+ TTL G + V++GDL DPT + Sbjct: 71 SNQKLFTTAAALDLLGPEHRYETTLSFDGTTRDSVMRGDLRLVGSGDPTFGSTALERTDP 130 Query: 119 ---MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDM----TQCFSAPPAAAIVDR 171 L + GV +I+G ++ D F + GW + + Q Sbjct: 131 LRNWAERLAEMGVRRIEGRLIGDDQAFLNGFYPDGWSVSYLTRQKGQQMGVRAGGLSYRD 190 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 N V++ + PG +R+ +++ ++ T R L NR L Sbjct: 191 NTVPVTVRAT-TPGTPPEVRIQPEGVLSVKNEAVTSERWRGSTL---LINRTFSTNRIVL 246 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE---PGTVVA 288 TG + RS V D ++ I ++ L+ AGI L+ V+ G + Sbjct: 247 TGSV-ARSYGGVRNVPVSDPTAFTLRIFRERLQDAGIETDLELVNAEAVDAPSGGGKPLF 305 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 S L +++ + K+S+N A+ V R G G+ R G LR +AG++ Sbjct: 306 VYVSPLLSEIVTEINKRSNNFYAEQVLRTYGWG-----GSTRGGIQRTESFLR-RAGINT 359 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAG-YDGSLQYRAGLHQ 407 + DGSGLSR NL+ P + +L ++ H F + +P G + +L+ R G Sbjct: 360 RPLSLNDGSGLSRKNLVTPRALQALLAHMNDHAAGDVFRASIPRGGERNTTLRTRLGRT- 418 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 +V AKTGSL V L+G+ G R+AF + + Y + +VR + Sbjct: 419 -----QVRAKTGSLAFVRGLSGYAERPDGGRVAFALFANNYTGPSYQITHTMDDIVRLLT 473 Query: 468 R 468 Sbjct: 474 A 474 >UniRef50_Q11VD0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11VD0_CYTH3 Length = 483 Score = 335 bits (859), Expect = 2e-90, Method: Composition-based stats. Identities = 109/481 (22%), Positives = 200/481 (41%), Gaps = 32/481 (6%) Query: 2 RFSRFIIGLTSCIAFSVQ--AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 + LTS + V + L A + + ++ + A+ + ++QQ Sbjct: 10 PLLYILFFLTSLVQAQVSWNSQLKPILEDSLLKRAQVGISIRDITANTLVFEKNAQQAFT 69 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI--- 116 PAS K++T AAL LG D+RF T + GN+E G G L + DPTL + Sbjct: 70 PASNLKIVTTAAALELLGSDYRFVTKVLYTGNIEAGNFSGTLYVKGSGDPTLGSDKMTAA 129 Query: 117 -------RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 RN V LK G+ GN++ID + F + + W D+ + A + Sbjct: 130 GSYQTLVRNWVTALKNKGITAFTGNLVIDPTHFGYNAIPNDYTWGDIGNYYGAGSYGLNI 189 Query: 170 DRNCFSVSLYSAPKPGDMAFIR--VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 + N +++ G + I + V+T GS + + Sbjct: 190 NENQNVIAIKPGTSLGSITTILSITPKDTSCVYVNHVKTGAAGSGD---QSIVYSSPYNP 246 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVN-----E 282 + G +P S + ++ D A G +L E+ GI W G + TQ + Sbjct: 247 FVYIEGTVPAGS-TYNVKASISDPARLLGQLLTKEMAVQGIQWKGEMRVLTQDDTIPDTT 305 Query: 283 PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQ 342 + ++S L ++ S+N+ A+ + + I + + G+ G+ AV++ L+ Sbjct: 306 NWITLLEQRSPRLKEIAVYTNLVSNNLYAECLLKEIAFNKTGI-GSTELGAAAVKKYLK- 363 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 + GVD ++ DGSG+S N I+P + +L A+ F+ LP AG +G++ + Sbjct: 364 KIGVDTSGLVLRDGSGMSPFNSISPNQLTSLL---AKQQANTVFVGCLPTAGKEGTVAHI 420 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 GK+ K+G++ G +G++T ASG+ A ++ + + + + Sbjct: 421 CKESG----GKIRVKSGTMNGTTCYSGYVTAASGKVYAVSLMVNKHEAKNRTIQRVLEKV 476 Query: 463 V 463 + Sbjct: 477 L 477 >UniRef50_UPI0001BC611F D-alanyl-D-alanine carboxypeptidase n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=UPI0001BC611F Length = 477 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 106/478 (22%), Positives = 208/478 (43%), Gaps = 40/478 (8%) Query: 8 IGLTSCIAFSVQAANVDE--------YITQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 I L+SC V + + ++ +L+ + D+ + + Sbjct: 14 IFLSSCTKLPVSSGELSSQPKVVKEFVKAEIVEHGDLSFYAVDLKTGKVVADHRGKSALV 73 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD--- 115 PAS K+IT+ AAL +G D F T L +GN+ ++G+LKG L + G DPTL Sbjct: 74 PASVMKIITSAAALEVMGGDKTFETKLMYEGNINKDGILKGTLYIQGGGDPTLGSDGISA 133 Query: 116 -----IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 + + V +KK+G+ ++G++++ +F W W DM ++ + Sbjct: 134 APEAFLADWVKEMKKAGITSVNGDIIVLDDLFGYDGIPGKWLWEDMGTDYAPGTYGISIF 193 Query: 171 RNCFSVSLYSAPKPGDMAFI-RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 N +++ L S I +T +Q P G + + NR Sbjct: 194 DNIYTLYLSSGAPGTTPKIIGTKPEMKDLTFDNQAVVSPDGKRDIYVRGVPF----ENRR 249 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR---QTQVNEPGTV 286 G +PQ + + + + D + G D +K+ GI ++G + + + V Sbjct: 250 GFYGIVPQDKKEITIKSDIPDPGLFLGQYFSDYMKKNGIKFNGKVTTARLTAKRPKNTVV 309 Query: 287 VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGV 346 +A +SAP+ +++K++L +SDN A+ +F+++ V + +++ G+ Sbjct: 310 IAVTKSAPVSEIIKVLLTRSDNHYAEHLFQILEKVEGVN----------VVEFWKEK-GL 358 Query: 347 DIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLH 406 D+ + + DGSGLSR + ++ + V+ Y+ F + P+AG +G++ L Sbjct: 359 DVDSLTMRDGSGLSRGDTLSTKLLTDVIMYMDNKKELK-FEELFPVAGKEGTVAS--FLK 415 Query: 407 QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 ++ K K+GS+ G+ + AG++ +R AF ++ + E + R L+ Sbjct: 416 NTPLNEKARIKSGSMGGIQSYAGYLE-KDNKRYAFAIIVNHWNGERTELRTEMEKLLN 472 >UniRef50_A2SCH3 D-Ala-D-Ala carboxypeptidase 3 (S13) family n=1 Tax=Methylibium petroleiphilum PM1 RepID=A2SCH3_METPP Length = 514 Score = 334 bits (857), Expect = 4e-90, Method: Composition-based stats. Identities = 117/492 (23%), Positives = 202/492 (41%), Gaps = 36/492 (7%) Query: 8 IGLTSCIAFSVQAANVDEYI--TQLPAGANLALMVQKVGASAPAID----YHSQQMALPA 61 + + + A V + QLPA A +A +++ P + +QQ PA Sbjct: 24 MAAPNALPPDDLPAAVQTALKRAQLPADALVAYIIELGPPGPPRGLPRLTHRAQQPVNPA 83 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 S K+ T AL LGP + + T + T G V +GVL+GDL+ + DPTL + + ++ Sbjct: 84 SLMKLYTTGVALELLGPAWTWPTPVLTTGQVVDGVLQGDLILQGRGDPTLVIERLWLLLR 143 Query: 122 TLKKSGVNQIDGNVLIDTSIFA---SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 +++ G+++I G++++D S F + P + + ++ P A +++ ++ Sbjct: 144 EVRQRGIHEIRGDIVLDGSAFMLNGADAGDPADFDGERFRPYNVRPDALLLNHKSVTLRF 203 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 P G + V + S V + G L D R LTG P Sbjct: 204 VPEPSRGVARVSTDVNLAGVQIDSAVPMVS-GPCGDWRGSLKPAFDDPGRIRLTGLYPVS 262 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 A + SY ++ + + G +G++ R + S PL + Sbjct: 263 CGEKTWPVAYAEPGSYNVRLIAEAWHEVGGQLAGSV-RNGPAPVAAQPLFEATSPPLAAV 321 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNV----------------------PGTWRAGSDAV 336 ++ + K S+N++A +F +G T A + V Sbjct: 322 VRDINKFSNNVMAQQLFLSLGLIPAGTLPLPASATTVATGEVSTPQTPAGNTADAAREMV 381 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 R +R +AG G I +GSGLSR + + + LQ + +S LPL G D Sbjct: 382 RAQVRSRAGCTDGEFSIDNGSGLSRQSRSSARCLGAWLQALWASPVMPELMSSLPLTGID 441 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G+ R G + G+ KTGSL+ LAG++ SG+R AFV ++ + A R Sbjct: 442 GT-ARRPGRNWGAALGRAHLKTGSLRDAMGLAGYVLGQSGRRYAFVAIVNHPSAGAA--R 498 Query: 457 NRRIPLVRFESR 468 LV++ + Sbjct: 499 PVLDALVQWAAE 510 >UniRef50_B3ESX9 Putative uncharacterized protein n=1 Tax=Candidatus Amoebophilus asiaticus 5a2 RepID=B3ESX9_AMOA5 Length = 532 Score = 334 bits (856), Expect = 5e-90, Method: Composition-based stats. Identities = 108/486 (22%), Positives = 192/486 (39%), Gaps = 58/486 (11%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + A+++L + +PAS+ K+ T AL LG DF+F T L+ Sbjct: 44 ESVLKNASVSLYAVNTATREVIHSINPHISLVPASSLKLFTTATALEILGEDFKFQTRLQ 103 Query: 88 TKGNV-ENGVLKGDLVARFGADPTLKRQDIRN----------MVATLKKSGVNQIDGNVL 136 G V + G L+G+L DPTL + R + T+K G+ +I+G V+ Sbjct: 104 YNGEVDKRGTLRGNLYILGEGDPTLGSKMFREYYYDPYFIETWINTIKAKGIKRINGAVI 163 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA-PKPGDMAFIRVASY 195 DT + W D+ + A + + N + + + ++++ Sbjct: 164 GDTKTLEDYTAPDTWVVEDLGNEYGAVYSELSIFDNKYEMLFMPRLIDETKLDIVQISPQ 223 Query: 196 YP--VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 P V + ++++ + +Y N + G +PQ L + ++ D A Sbjct: 224 IPEEVKIINRLQRV-----GDKYQFCIYGMPYKNTRIIKGAIPQDKLTLVVKASIPDPAY 278 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQV--------------------------------- 280 +A L++EL++ GI + Sbjct: 279 WAAYTLRNELEKNGIKVKKGPTTTRRKQELHLHKGNLEPEIRQVKRQQEGKYQKSKRNVK 338 Query: 281 --NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 P + + S PL D++ I ++S+N+ A+ + IG T G A Sbjct: 339 KDETPRVDLYTNYSPPLKDIVVITNRESNNLYAEHIINQIGLHIAGKEDT-ENGIKAAID 397 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 AG+D + DGSGLSR+N I ++ +L Y+ N F LP+AG G+ Sbjct: 398 FWCA-AGIDTTGIFLHDGSGLSRYNSITTKQLVDILCYMKNSKNFDAFYHSLPIAGETGT 456 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 L+ +A + G + AKTG ++ V + G+ TT SG +AF ++ Y P + + + Sbjct: 457 LKE--LFTKAPLKGNLKAKTGGMKRVLSYTGYCTTISGTEIAFSLIVNNYNGTPKELKQQ 514 Query: 459 RIPLVR 464 L+ Sbjct: 515 IEKLLT 520 >UniRef50_B0JUK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Microcystis aeruginosa RepID=B0JUK1_MICAN Length = 474 Score = 332 bits (852), Expect = 2e-89, Method: Composition-based stats. Identities = 115/459 (25%), Positives = 204/459 (44%), Gaps = 32/459 (6%) Query: 14 IAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + A +D + + GA ++V+ + + H PAST K++T AA Sbjct: 42 ICPADLATRIDRILARPDYQGAYWGILVKSLNSQENLYSLHENNFFTPASTAKLLTTAAA 101 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 + D+R T + +GN + L D T+ + + LK G+N I Sbjct: 102 FSKFNRDYRLKTPILAQGNPPDLE---TLTLVGRGDATITTEKLEKFAEKLKAQGINSI- 157 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 +L+ S F D W W D+ ++ P ++ +++ N ++ L + Sbjct: 158 YRLLVVASPFVVSDSQKTWEWEDVFFDYAVPASSLVLNENSVTLKLLPRQLGQSLDLQWS 217 Query: 193 ASYY--PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + +Q T +GS + ++ NR +TG L S+ A+ Sbjct: 218 DPIAAKQWLIENQTSTAAQGSPNTLAIKGNLAN---NRLIITGSLAIDSQDD-FNLAIPQ 273 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 + Y A ++ L++AGIT + + G + + +S PL L++ + K SDN++ Sbjct: 274 PSEYFLARWRNILEKAGITVKNAEISSQIL---GHEITNLESEPLAYLVEKVNKNSDNLL 330 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+T+ +M+G G +++ L + G+D + I DGSGLSR NLI P T+ Sbjct: 331 AETLLQMLG------------GVSGLQETLT-KLGIDSDSYKIGDGSGLSRQNLIKPKTL 377 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 Q+LQ +A++ ++ L + G DG+L R Q ++G++ AKTG+L GV LAG+ Sbjct: 378 GQILQLMAENP---DYRRSLAIGGVDGTLTNR--FRQTPLEGRLQAKTGTLTGVIALAGY 432 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + TA Q + F ++ RN ++ +L Sbjct: 433 LATADNQPLIFSITVNNSDQPATTLRNGIDEVILLLGQL 471 >UniRef50_Q55728 Penicillin-binding protein 4 n=1 Tax=Synechocystis sp. PCC 6803 RepID=Q55728_SYNY3 Length = 486 Score = 332 bits (851), Expect = 2e-89, Method: Composition-based stats. Identities = 108/478 (22%), Positives = 197/478 (41%), Gaps = 33/478 (6%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQLPAG--------ANLALMVQKVGASAPAIDYHSQ 55 F + LT+ + V + +L + A + +Q + S P Y + Sbjct: 24 GIFYLCLTTGVGAQADRLCVGDLQQKLESHLQQPELSRAQWGIAIQPLTDSQPIYQYQAD 83 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 + +PAS QK+IT AL +LGP+FRFTT + + + + DP+ D Sbjct: 84 RFFIPASNQKLITTAMALQELGPNFRFTTQVYQRDGGKK------VQVISSGDPSFDVDD 137 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + + LK GV I+ + + +I + P W W+D+ ++ P AI+ N Sbjct: 138 LTAIAKGLKDRGVTAIE-ELELVDTIAPQDYQRPSWEWDDLHYGYAPPVNGAILTGNQVI 196 Query: 176 VSLYSAP--KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 ++L +P + + + +Q T Q ++ + +TG Sbjct: 197 LTLTPQNLGEPLTPTWSDPIAGAQWQIINQTETAVDPHQPPQVQQI----FGQRQLVITG 252 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 LP E + AV D Y A L+ +L + GI+ S +++ + + S Sbjct: 253 GLPPAGETRSITLAVADPQQYFLASLQQKLAEQGISVSTSIVSANTKAIAPAPLLALTSP 312 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL L+K + + S+N+ A+ + I P V ++ G+ + Sbjct: 313 PLWTLIKTVNQDSNNLYAEALLNAI-----QPPSQATDWQSYV-----ERLGLATTTVRL 362 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DGSGLSR +L+ P ++Q+L Q + L +AG G+L+ + GK Sbjct: 363 RDGSGLSRQDLVTPQALVQLLINQTQKSTGTIYQQSLAVAGRSGTLER--SFADTPLVGK 420 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 + KTG+L GV +L G++ +AF ++ + + R +V + +++ K Sbjct: 421 MRGKTGTLTGVVSLTGYVENQQWGTVAFSFMVNNSDLGASVLREAMKQMVLWTAQVEK 478 >UniRef50_B4WKN5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WKN5_9SYNE Length = 504 Score = 331 bits (850), Expect = 2e-89, Method: Composition-based stats. Identities = 105/487 (21%), Positives = 196/487 (40%), Gaps = 30/487 (6%) Query: 1 MRFSRFIIGLTSCIAFSVQA---------ANVDEYITQL-----PAGANLALMVQKVGAS 46 +F ++GL + +A QA A++ I + G ++ ++++ + Sbjct: 27 FKFGELVLGLATSLAILAQAEIAFAGVCRADLPGKIDAIADKYTLDGTDIGILIEDLTPD 86 Query: 47 -APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARF 105 ++Q+ +PAS K++T AAL LGPDF T++ + + DL Sbjct: 87 TRALYARNAQEKLVPASNVKLLTTAAALQALGPDFSIRTSVYGQPDAAIQ----DLYVVG 142 Query: 106 GADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 DPT I + + LK+ GV +++ +D F P W D + A Sbjct: 143 RGDPTFTSYQINLLSSQLKQKGVRRVNSLTAVDN-HFTGPVANPYWDEEDYRAGYGAVAN 201 Query: 166 AAIVDRNCFSVSLYSAPKPG--DMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 + I++RN + + + R + + RT+ G+ Sbjct: 202 SLILNRNELGFTAIPNGIGQLLSIVWDRPEFVQGWRIENNTRTVGDGN----EFIDAGQK 257 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 L + G L + + A+ D SY + L G+ + + T E Sbjct: 258 PGLKVMDVRGQLIAGTASENTSIALLDPGSYFAEQFQQSLSAYGLGNASVQVTTTSPPEG 317 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT-WRAGSDAVRQILRQ 342 +A+ +S PL + S N+ A+ + + +G + G + AG+ AV +L + Sbjct: 318 TVELAAIESPPLRAFIDPTNLYSVNIYAEAMIKTLGRSLVPETGNAYTAGAIAVGSVLTE 377 Query: 343 QAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR 402 GV I DGSGLS+ N + P ++ LQ +A+ +N + + L +AG G+L+ R Sbjct: 378 -LGVSPDGISIVDGSGLSKQNKVTPEAFVETLQVMARTENATTYRNSLAVAGSSGTLRNR 436 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 + +G+ KTG+L Y L+G++ + + ++ D R + Sbjct: 437 --MQGTLAEGRFQGKTGTLSNTYTLSGYLNPPNHPPLVLSILINNTDASGRDVRGSIDQI 494 Query: 463 VRFESRL 469 V + + L Sbjct: 495 VTYAASL 501 >UniRef50_B0CDC7 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDC7_ACAM1 Length = 488 Score = 330 bits (845), Expect = 9e-89, Method: Composition-based stats. Identities = 115/462 (24%), Positives = 198/462 (42%), Gaps = 28/462 (6%) Query: 13 CIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + ++DE +Q A L + VQ + AS P +Q+ LPAST KV+T A Sbjct: 30 PQCVAQLQRDMDEIASQPLFTQARLGIAVQPLQASQPLYTKDAQRYFLPASTTKVMTTAA 89 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 AL +LGP FR T + G G L DPTL Q ++ + LK+ G+ QI Sbjct: 90 ALTRLGPQFRIQTDIYGSGT---GPALDHLRIVGRGDPTLSDQQLQQIATQLKQKGIRQI 146 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP--KPGDMAF 189 + ++L D + F P W W D+ + AP + I+++N + + ++ +P + + Sbjct: 147 N-HLLGDDTYFQGPGIVPSWEWEDLQAGYGAPVNSLILNQNAYELKIWPQALGQPLRVEW 205 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 + P ++ RT+ + + E + + G+ +TG L + A AV Sbjct: 206 LSPHPIGPWRQINRTRTVAQNAPEYIEI-VRRLKGNTLEIEITGQLRAGAPHDRSAVAVI 264 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV-------VASKQSAPLHDLLKIM 302 D + + L I L T + + QS+PL L+KI Sbjct: 265 DPGWFLLKRFRAILAAQQIKVGRLSLLSTPQERNAALKGKSEQRLTQIQSSPLTTLIKIT 324 Query: 303 LKKSDNMIADTVFRMIGHARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 ++S+N+ A+ + + +G A+ T + G A++Q L Q GV+ +ADGSGLSR Sbjct: 325 NQESNNLYAEALVKALGAAQKQTSQNTHQQGLKALKQTLTQ-LGVNASTYAVADGSGLSR 383 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 NL++P + Q L I + + F + LP + +K+G + Sbjct: 384 QNLVSPLALTQTLNGILKSPHASTFQTSLP-----------KDSIGQNSPSALWSKSGGM 432 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 +GV L G++ + F + Y + +R ++ Sbjct: 433 RGVSTLTGYLQHPQSSPVLFSLMFNQYNQSSSKRRQAMDAML 474 >UniRef50_B9ZIK8 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZIK8_NATMA Length = 457 Score = 329 bits (843), Expect = 2e-88, Method: Composition-based stats. Identities = 110/440 (25%), Positives = 185/440 (42%), Gaps = 21/440 (4%) Query: 35 NLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVEN 94 + ++ + P + + LPAS K++TA A +LGP +RF TTL G ++ Sbjct: 33 SASVYAADLRTGEPIVAANPNIPLLPASNTKLVTAARAFDELGPAYRFETTLHADGPIQE 92 Query: 95 GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN 154 G L GDLV L + D+ + + +G++ + G ++ID S F PGW W+ Sbjct: 93 GHLLGDLVLTGYGAADLSQGDLLALAEDIADAGIDTVAGELVIDASAFDRQSLGPGWTWD 152 Query: 155 DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA 214 D + A ++RN +++ G + + V + S V T P E Sbjct: 153 DGQFEYGAKSTPLALERNTVDITVSHRN--GSVTVDASPTSEIVRIESDVTTGPTEQLEV 210 Query: 215 QYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG-T 273 + G +P + A V D +AG++L+ L+ G+T G T Sbjct: 211 YKKRA------SEVIRVEGQIPPGETTVE-ASPVDDPMMHAGSLLRQALESTGVTIDGWT 263 Query: 274 LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 + V+ G A+ +S+PL ++ ML SDN +A+ + R + G+W A Sbjct: 264 RIEHDPVDTDGPPCAAVESSPLSAQVRTMLVTSDNFVAEQLARTVALELDG-EGSWNAWE 322 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 V L + + DGSGLSR+NL++ + + VL++ + LPLA Sbjct: 323 THVNDFLEAR---GADAAHLRDGSGLSRYNLLSASGIAAVLEWSLDQPWGDRYRRSLPLA 379 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEP 452 G +G++ R V AKTG+L GV L+G++ + + F LS E Sbjct: 380 GVEGTVSNRLEDAPLP----VRAKTGTLTGVRTLSGYVENRENEPEIVFSCLLSNLTGEH 435 Query: 453 ADQRNRRIPLVRFESRLYKD 472 + + + Sbjct: 436 EAT--ATDRIDDLVESIIEA 453 >UniRef50_C6NX09 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Acidithiobacillus caldus ATCC 51756 RepID=C6NX09_9GAMM Length = 536 Score = 328 bits (841), Expect = 3e-88, Method: Composition-based stats. Identities = 119/506 (23%), Positives = 215/506 (42%), Gaps = 48/506 (9%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 +R R ++ C+ + +A + +++++K+G S P + + + P Sbjct: 23 LRHLRMLLLCVICLGVA-RAQAMPLLAPPASTDGRWSVLLEKIGDSHPLVAHRPDALLAP 81 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----- 115 AS K+ + L +LG D R T L +G ++ G L+G LV G DP L + Sbjct: 82 ASVLKLFSTAYILDRLGADARQCTQLRARG-LDQGTLQGPLVFVGGGDPNLSSRRFPYTG 140 Query: 116 -----------IRNMVATLKKSGVNQI-DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAP 163 +R + L ++GV ++ DG V +D A PGW +D + AP Sbjct: 141 NSEHEADSLVVLRELAEQLWQAGVRRVPDGIVAVDGPFPAETGSPPGWTEDDQRFWYGAP 200 Query: 164 PAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP 223 ++ V + A KPG +A +++ + + VRT+ + Q E + Sbjct: 201 IHGLYINDASVLVRVRPAAKPGALATVQITPNPQGFIRNAVRTV----GKRQPTEPVRLV 256 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT----- 278 D + L+G + S L A D +A L + L++ GI SG + + Sbjct: 257 TDTTGWRLSGSVRAGSRTLVAGLAQPDPPRFAAITLAEVLRERGIAVSGDIRVRGLSRNR 316 Query: 279 -------QVNEPGTVV-------ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 + E +V+ A S PL + ++++ K S N +T+ R+ A+ Sbjct: 317 DAGLEESGIPEQASVLTHARLLLAEHWSPPLAEEIQVINKVSQNTHIETLTRLADIAQ-G 375 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNEL 384 GT + + R++ G+ G T D SGLSR + ++ + ++++L + Q Sbjct: 376 RSGTRSSAVAGLETWARER-GLLAGQTRFVDASGLSRDDRLSASDLVRLLNWATQQPWWP 434 Query: 385 NFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQY 444 + + LP AG DG+L++R G + AKTG+L +LAG + Q F Sbjct: 435 EYAASLPEAGSDGTLRHRFR---TLDAGMLLAKTGTLSDAISLAGILYIKPEQAYVFAIL 491 Query: 445 LSGYAVEPADQRNRRIPLVR-FESRL 469 ++ +++ A R LV+ + L Sbjct: 492 VNDFSLSRAALRGVLDRLVQGWARAL 517 >UniRef50_Q0C561 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Hyphomonas neptunium ATCC 15444 RepID=Q0C561_HYPNA Length = 480 Score = 327 bits (839), Expect = 4e-88, Method: Composition-based stats. Identities = 123/492 (25%), Positives = 202/492 (41%), Gaps = 35/492 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLP--------AGANLALMVQKVGASAPAIDY 52 M RF+ G + + F+V A P G + V + Sbjct: 1 MIRPRFLSGALAAVVFAVSACTTTPAEPPPPAPFEAMQVEGVRWGVSVMTLD-GREVFSR 59 Query: 53 HSQQMALPASTQKVITALAALIQLG----PDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 +++ +PAS KV T+ AA L PD T+L + E DLV D Sbjct: 60 SAEERFIPASNTKVFTSAAAFHYLTGLDTPDPAGGTSLWLEPGGEGEAP--DLVLMGAGD 117 Query: 109 PTL------KRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSA 162 P L + + + +G+ ++ G+V+ D ++ + GW WN+ ++A Sbjct: 118 PGLMDSADCVDNCLHQLADAVVAAGITRV-GDVIGDDTLLPAALWGQGWSWNNFVWYYTA 176 Query: 163 PPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT-MFSQVRTLPRGSAEAQYCELDV 221 P +A V+ N +++ PG+ A + A + + ++V T P GS + Sbjct: 177 PISALTVNENTLGLTVSPGAAPGEPAVLSWAPGDDLLLVDNKVITGPPGSLQTLRMVRVP 236 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV- 280 L LT +P + P A A+ D A A L + G+T G + + + Sbjct: 237 ---GLEMLRLTEYIPADAAPRMYAVAMHDPAETAALRFVRLLIERGVTVEGLMRARHEAD 293 Query: 281 --NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 ++A AP+ + +L S N+ A+ + R I AR + + G + + Sbjct: 294 DSPAEQVLIARLTPAPIKASIGRILVNSQNLHAELLLRKIALARGQL--SPEGGQEVLTA 351 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L +AG+ + DGSGLS +N + P M Q L++ A + +MLP+ G DG+ Sbjct: 352 -LVAEAGLTPVEAELFDGSGLSTYNRVTPRGMAQFLRWAAGQPWGDAWRAMLPVGGADGT 410 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 L R ++GKV AKTGSL GV L+G++T SGQ + F Y + + Sbjct: 411 LARR--FKGTSLEGKVFAKTGSLHGVNALSGYMTARSGQTLVFAVYANDRPADAPSIIAE 468 Query: 459 RIP-LVRFESRL 469 LVR Sbjct: 469 MDANLVRIAEAN 480 >UniRef50_Q4ZUL8 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=23 Tax=Pseudomonadaceae RepID=Q4ZUL8_PSEU2 Length = 488 Score = 327 bits (839), Expect = 5e-88, Method: Composition-based stats. Identities = 103/444 (23%), Positives = 187/444 (42%), Gaps = 16/444 (3%) Query: 16 FSVQAANVDEYITQLPAGANLA-----LMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 +V + + Q + L L++ + +++ PAST K+IT Sbjct: 23 AAVINTTLPPKVQQALKASKLGDDALSLVMLPLNGPGTPTVFNADVSVNPASTMKLITTY 82 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQ 130 AAL LGP ++ T T G + NGVL+G+L + G DP L + + ++ L+ +GV Q Sbjct: 83 AALEMLGPTHQWKTEFFTDGTLSNGVLRGNLYLKGGGDPKLNMEKLWLLMRDLRANGVQQ 142 Query: 131 IDGNVLIDTSIFASHDKAPGWPWN-DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 + G++++D S F D + F P A +V+ + + G + Sbjct: 143 VTGDLVLDRSHFVQPQLPVFNDDGNDDNKPFLVKPDALMVNLKA--LRFVTRNDDGRILV 200 Query: 190 IRVASYYPVTMFSQVRTLPRGSA-EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + + +QV+ T+TG L ++ Sbjct: 201 SVEPPIASIRIDNQVKASASKQCTGDVRYNPVTQADGSVNVTVTGQLGNGCNSQT-YLSL 259 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 D +YA ++ ++ G T G + ++A S L ++++ + K S+N Sbjct: 260 LDHPTYAAGAVRAIWQELGGTIQGKDRV-GVLPGNAKLLAKAFSPDLVEVIRDINKFSNN 318 Query: 309 MIADTVFRMIGHARFNVP--GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 +A +F +G N +A +RQ L ++ G+ + ++ +GSGLSR ++ Sbjct: 319 TMAQQLFLSLGEEFRNEADGDDGKAAQRVIRQWLAKK-GITAPHLVMENGSGLSRAERVS 377 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 M +LQ + F+S +PLAG DG+++ R L + + G+ KTG+L V Sbjct: 378 AREMAVILQAAWRSPYAAEFMSSMPLAGLDGTMRKR--LKRTPLLGEAHIKTGTLNTVRA 435 Query: 427 LAGFITTASGQRMAFVQYLSGYAV 450 +AGF ++G A V L+ Sbjct: 436 IAGFSRDSNGNTWAVVAILNDPRP 459 >UniRef50_A1ZYI7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZYI7_9SPHI Length = 515 Score = 327 bits (838), Expect = 6e-88, Method: Composition-based stats. Identities = 108/470 (22%), Positives = 199/470 (42%), Gaps = 27/470 (5%) Query: 13 CIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 +D+ + AL VQ V + + + Q AS+ K +T A Sbjct: 48 ASIPVALKQLIDQLNRDAVLRHGSWALSVQDVTSGRQLVQVNPYQTMTVASSLKTVTTSA 107 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI--------RNMVATL 123 L LG +++F T ++ G + GV+ G++ + G DPTL + +A + Sbjct: 108 GLGILGSNYKFATQIQYDGALNGGVINGNVYIKGGGDPTLGSPLLGYSLDRTMNEWIAAM 167 Query: 124 KKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 KK+G+ +I G ++ID ++F + W W DM ++AP A V N + + L A + Sbjct: 168 KKAGIRRIKGQLIIDETLFEENVTPSSWIWADMGNYYAAPAGAINVLDNTYKLYLQPANR 227 Query: 184 PG-DMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 +R + + P + + ++T G+ + Y + + G +P S Sbjct: 228 LNTTPKVLRTSPWVPRIQFVNHLKTAAAGTGDQAYIH---GAPYDHVRYINGTIPMGS-T 283 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--------PGTVVASKQSA 293 + A+ D Y G + +L Q G+ + T++ + T+V + +S Sbjct: 284 FSIKGALPDPGFYLGIAFRKKLIQNGLMTNKNKATTTRMMKLDKQRINYRRTLVYTHRST 343 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 L L+K + S N+ A+ V + IG + G+ AG+ A+ Q + + G+ I Sbjct: 344 TLKSLVKWINLYSINLYAEAVLKAIGIKQ-QAEGSTAAGAKAITQYWKAK-GLSTSGLYI 401 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 DGSGL++ N I + QV + A+ ++ LP+AG G++ R Sbjct: 402 EDGSGLAQSNGITAYQLAQVQRLTAKQSYFNDYYQSLPVAGVSGTM--RGLCRGTRAQNN 459 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + AKTG + V + G+ +GQ +F + Y + + + L+ Sbjct: 460 LRAKTGGMTRVISFTGYFKNRAGQLRSFALVANQYTCKYNIIKAKLARLM 509 >UniRef50_B3QY12 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QY12_CHLT3 Length = 521 Score = 327 bits (838), Expect = 7e-88, Method: Composition-based stats. Identities = 105/473 (22%), Positives = 195/473 (41%), Gaps = 36/473 (7%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 ++T+ P + ++ + + + + +PAS QK++T AA L +FR++T Sbjct: 52 AFLTRSPGNFFWGVRIESLEKNQMIYSLNDHKNFIPASNQKILTVAAAFNFLDTNFRYST 111 Query: 85 TLETKGNVE-----NGVLKGDLVARFGADPTLKRQDIRN--------MVATLKKSGVNQI 131 + GN G+ GD++ + +P + + + +LK+ G I Sbjct: 112 EVYLSGNGNSNGNTQGIFDGDVIVKSNGNPCIASHWLEARPTIFFQWLADSLKRMGYAVI 171 Query: 132 DGNVLIDTSIF-----------ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 G+ + D S F D W W DM ++P +A + N V+ Y Sbjct: 172 KGDFIGDDSAFLISDMGRDFRGGDGDYPGSWEWGDMLFAMASPASAISFNENMVRVTAYP 231 Query: 181 APKPGDMAFI-RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 K GD + + + +Q T S + ++ N + G +P Sbjct: 232 GAKVGDKPIVETTVESAFLPITNQAVTGEANSQKTIRITREL---GTNHVLIVGNIPIGR 288 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG----TVVASKQSAPL 295 AV+ + ++++ ++ GI +G L R V ++ +S L Sbjct: 289 WRESEPIAVEQPTLFFLTVMRETFEKKGILHAGLLRRAEGVWPGSGDSLRLLYRYESPRL 348 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +L+ + K+S+N A V R +G + N + AG A+ L + G+ + + D Sbjct: 349 IRILEYINKESNNFAAGQVLRTLGKSVVN-EASHEAGLQAIEIYL-ESLGITEVSYRLKD 406 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR NLI+P +++VL+++ Q F++ L +AG DG+L R L + +V Sbjct: 407 GSGLSRQNLISPEALVKVLKHVYQSKYFGAFLNTLSVAGVDGTLSRR--LVGTNAETRVF 464 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 KTG L V G++ A G+ + Y + + ++R + Sbjct: 465 GKTGFLSSVRTFIGYVQAADGEWLGVSLMSMNYTQPTRQIESLQDEVLRLLAN 517 >UniRef50_B5EJH6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Acidithiobacillus ferrooxidans RepID=B5EJH6_ACIF5 Length = 500 Score = 326 bits (837), Expect = 8e-88, Method: Composition-based stats. Identities = 109/490 (22%), Positives = 198/490 (40%), Gaps = 35/490 (7%) Query: 2 RFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 R+ I + ++ A + TQ ++++Q V P + + LPA Sbjct: 17 RYFFVGILPFFWLMPAIAATGQKDANTQFGD-GQWSILIQDVQKGRPTLSVQADHGQLPA 75 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI----- 116 ST K++T L +LGP+ T + + +++GV++G L+ G DP L + Sbjct: 76 STAKLLTTAYILHELGPESHQKTRILAR-TIDDGVVRGPLIFLGGGDPDLSSRRFPFVRR 134 Query: 117 ----------RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 R + A + +GV QI +L D + F + PGW D + AP A Sbjct: 135 TVRDDPMYPMRMLAAQVWAAGVRQIPEGILADATYFPADSALPGWTEQDQRYWYGAPIHA 194 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL 226 + + +V + PG + + + V T+ + Sbjct: 195 LMFNDAMIAVRIRPGRAPGVRTNAEIMPNPGGFIRNTVITVSAEDP----IRPVRLEKSG 250 Query: 227 NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTL--------LRQT 278 + + LTG + + A D A +A L+ L++ GI + +Q+ Sbjct: 251 SGYLLTGAISAKGGIFAAMLAQPDPAYFAAVALRQALEEKGILVGNPIQALNNKRGAKQS 310 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 + ++A +S PL + + + K S+N + + R AR G+ + + + Sbjct: 311 RGYAHYALLAKHESPPLVEEITVANKVSENTHVEVLLRDADLARGG-DGSRASTMQGLHR 369 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L G+ + + DG GLSR + ++ A ++++L + Q ++ LP+ DG+ Sbjct: 370 WL-SVNGILDTQSRLVDGCGLSREDRLSAADLVRMLLHSYQEPWGGSWRDSLPVNAEDGT 428 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLSGYAVEPADQRN 457 L++R A G V AKTG+L+ +LAGFI G AF + + R Sbjct: 429 LRHRL---SALPAGTVQAKTGTLRDALSLAGFIRDNLGHPQYAFAILVEHFRGSEERIRR 485 Query: 458 RRIPLVRFES 467 R LV+ + Sbjct: 486 RMDALVQRVA 495 >UniRef50_UPI0000E87CD0 D-Ala-D-Ala carboxypeptidase 3 (S13) family protein n=1 Tax=Methylophilales bacterium HTCC2181 RepID=UPI0000E87CD0 Length = 464 Score = 326 bits (835), Expect = 1e-87, Method: Composition-based stats. Identities = 104/461 (22%), Positives = 193/461 (41%), Gaps = 16/461 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVG--ASAPAIDYH 53 +R F+ G + ++ A++ E L AN +Q + P ++ Sbjct: 2 LRTVIFLTGFFILFSTNLY-ADLPEKFKSLSQKYRFNEANYGFAIQNLSNKTKKPI-THN 59 Query: 54 SQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR 113 +++ AS K+ T AL LGP +++ + G V+ +LKGDL+ R D + Sbjct: 60 AEKSFNTASLVKIFTTYIALKDLGPSYKWRSEFLYTGKVDKDILKGDLIFRGTGDASFSI 119 Query: 114 QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 D+ M+ +++ G+ +I GN+++D S F K ++ + ++ P+ + N Sbjct: 120 ADLEKMIREVQRLGIKKITGNLVLDYSFFGVMPKDIN-FDDNPYRAYNVLPSPISLQSNT 178 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 + + I + + + + ++ R S L V D G Sbjct: 179 INFKFN--IDKNIIKIISEPNLSQLKIINNLKKTNR-SCANWKSSLGVDKIDSETIEFKG 235 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 R + A+ D + Y KD ++ G +SG + + + V+++ S Sbjct: 236 SFSDRCVGKEIDLALLDNSVYFHENFKDIWQRNGGLYSGIMKKNFEEPTNAIVISTHHSK 295 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 P+ +L++ + K S N++A + I T +D V L Q+ + N + Sbjct: 296 PVSELIRDINKFSLNLMARNLMLTIIKEVTGERPTEDMVNDYVNNWLSQKE-MTFENFYV 354 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGK 413 +G+GLSR I+P ++Q+LQ I I+ P+A DG+L+ R + G Sbjct: 355 DNGAGLSRDIKISPNQLLQILQKIYNDPLMPEIIASFPIASIDGTLRDRMQSKKFKQKG- 413 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 KTGSL+ V +AGF G +FV ++G + A Sbjct: 414 -HFKTGSLKDVVGIAGFFLNNDGDMHSFVFIMNGKNAKKAQ 453 >UniRef50_B8GRV5 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Thioalkalivibrio sp. HL-EbGR7 RepID=B8GRV5_THISH Length = 460 Score = 326 bits (835), Expect = 2e-87, Method: Composition-based stats. Identities = 94/408 (23%), Positives = 168/408 (41%), Gaps = 8/408 (1%) Query: 12 SCIAFSVQAANVDEYI-TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + A ++ A V+ I A +A+ VQ V A P + ++ PAS K+ T+L Sbjct: 18 TASAQNLLPAQVNRVIQAHGMDPARVAIWVQPVNADKPWLAHNPDTALNPASVIKLATSL 77 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQ 130 AAL LGP + + T + G VE GVLKGDL G DP L ++ ++ L++ G+ + Sbjct: 78 AALEVLGPAYTWKTRVHLGGPVEQGVLKGDLWLIGGGDPFLVTEEFWKLLGALRRQGIRR 137 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 I+G+++ D S F D+ P + ++ P +V+ N V + P ++ + Sbjct: 138 IEGDLVFDLSYFRLPDEEPAAFDGQPHRVYNQGPHPLLVNFNALHVEVMPDPDGDAVSAV 197 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + + +++R + V + L G P P A Sbjct: 198 VDPPIAGLHIDNRLRQRAGPCGGYRLGISYRVLEERTGIGLDGRFPGSCGPHRFARTALT 257 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 +Y + + Q G + G T + +S PL +L+++ K S+N++ Sbjct: 258 PEAYVHGLFRSLWAQWGGEFEGGWRVDTWSDVEREPTLVHESRPLGELIRLANKHSNNVM 317 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 +G F +P T G +A+ L + G+D ++ + +GLSRHN + + Sbjct: 318 TRHFELTLGAETFGMPATPEKGLNAILDYLAAR-GIDSKGLVLDNAAGLSRHNRVTARQL 376 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGS-----LQYRAGLHQAGVDGK 413 +L+ Q I +L G G L+ R+ + Sbjct: 377 AGILRAGRQSP-LHAGIHLLSGPGRSGRHPAQPLRGRSCRRAHAPQNR 423 >UniRef50_Q2KWB6 Probable D-alanyl-D-alanine carboxypeptidase n=5 Tax=Bordetella RepID=Q2KWB6_BORA1 Length = 483 Score = 325 bits (832), Expect = 3e-87, Method: Composition-based stats. Identities = 104/460 (22%), Positives = 196/460 (42%), Gaps = 17/460 (3%) Query: 18 VQAANVDEYITQL-----PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 Q A + + Q L+++VQ+V ++Q PAS K++T A Sbjct: 31 AQVAGLPPKLMQAWKATKLPDEALSVVVQEVNGPRML-AINAQTPRNPASVMKLVTTWVA 89 Query: 73 LIQLGPDFRFTTTLETKGNVE---NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVN 129 L +LGP++ + T T V G L G L R G DP QD+ ++ L+ GV Sbjct: 90 LSELGPNYSWRTDFLTDPGVRPDAQGRLNGPLYWRAGGDPQFMLQDLWTLLRDLRLRGVK 149 Query: 130 QIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF 189 +I ++++D SIF PG + ++A P A +V + + P Sbjct: 150 EIS-DLVVDRSIFGQVAIDPGAFDGAPDRAYNASPDALMVGFGALRLLVTPDPVARKWVA 208 Query: 190 IRVASYYPVTMFSQVRTLPRGSAEAQYCELDVV-PGDLNRFTLTGCLPQRSEPLPLAFAV 248 + + ++ A V + L+G + L Sbjct: 209 TVDPPVSGLRLEGAIQWTDARCPGAPAVSTQPVVTQEGVSLRLSGAVAGSCGEFSLYRLA 268 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDN 308 Y A+ + ++ G T+ G + R V V+AS +S L + ++++ K+S+N Sbjct: 269 LSQPEYTDAVFRLLWRELGGTFKGKM-RPGVVPGDAIVLASHESPTLGEAIRVINKRSNN 327 Query: 309 MIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 ++A T+ +G R P T + +Q+L Q G+++ ++ +G+GLSR ++ Sbjct: 328 VMARTLLLTLGAERGRRPATVASSESVAKQLLSGQ-GLNMPELVLDNGAGLSRDARVSAD 386 Query: 369 TMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 ++ +L + +++ + +AG DG+++ R + G G KTGSL+ V ++A Sbjct: 387 SLAAMLSLAWRSPVMPEYLASMAIAGVDGTVRRR--MQGKGALGMAHLKTGSLRDVRSIA 444 Query: 429 GFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 G++ SG+R V ++ A R+ L+ + + Sbjct: 445 GYVLGNSGKRYVVVSMVNHEN--AAAVRSFDDALIAWLAE 482 >UniRef50_D2EX46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=20 Tax=Bacteroides RepID=D2EX46_9BACE Length = 479 Score = 324 bits (831), Expect = 4e-87, Method: Composition-based stats. Identities = 109/455 (23%), Positives = 202/455 (44%), Gaps = 19/455 (4%) Query: 18 VQAANVDEYIT-QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 +A +D I +LPAG+N+A+ V + A P Y + +++ PAST K++T + AL + Sbjct: 28 PLSARIDALIEHKLPAGSNVAISVYDLTAGKPLYGYQADKLSRPASTMKLLTTITALSRP 87 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 D F T + +G +E L+GD+ G DP + + ++VAT+ + + I G V Sbjct: 88 EADEPFRTEVWYQGTIERDTLQGDMYVIGGYDPEFDEEALDSLVATVARFPFSVIKGKVY 147 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 D S+ S GW W+D F + ++++ V+ + + Sbjct: 148 GDVSMKDSLYWGSGWLWDDTPYSFQPYLSPLMLNKGVVKVTATPGERGDSARLECTPASS 207 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 T+ + +T R + ++ + N T+TG + R F+ QD + Sbjct: 208 YYTLTN--KTQSRTPSAGRFRVSRDWLVNGNNITVTGNVDARRAGTVNIFSSQD---FFM 262 Query: 257 AILKDELKQAGIT----WSGTLL---RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 + L+ GI + + + + +AS + + D++K ++K+SDN+ Sbjct: 263 HTFMERLQARGIRCIPAVDAEVSYLFGEFRQDSLSVRMASYE-TSVQDVVKQIMKESDNL 321 Query: 310 IADTVFRMIGHARFNVP-GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 A+ + +G + G A+R +L ++ G + +ADG GLS +N I+P Sbjct: 322 NAEAMLCRLGVQSSGKKRVSAEDGLSAIR-MLIKEMGYNPDRYNLADGCGLSNYNYISPE 380 Query: 369 TMMQVLQYIA-QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ L+Y + D LP+ G DG+L++R V AKTGS + L Sbjct: 381 LLVSFLRYAYSRTDVFQKLYKALPIGGVDGTLEFRMK-KGTLSHRNVHAKTGSFTAINCL 439 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 AG++ +G +AF + A+ + R + + Sbjct: 440 AGYLKARNGHEIAFAIM-NQNALSGREARAFQDAV 473 >UniRef50_Q12NB4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Shewanella denitrificans OS217 RepID=Q12NB4_SHEDO Length = 560 Score = 323 bits (828), Expect = 8e-87, Method: Composition-based stats. Identities = 134/470 (28%), Positives = 221/470 (47%), Gaps = 36/470 (7%) Query: 34 ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE 93 + LA+ + + ++Q++ PAS K+ TA+ A+ +LG D+R+ + + KG + Sbjct: 89 SQLAIAIWDPQQQRSLFELNTQKLMQPASVMKLFTAVTAIAELGHDYRYRSQVFIKGPII 148 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 N L+GD+ DP L QD+ ++A K +G+ +I+G V + T+ +APGW W Sbjct: 149 NKALEGDVWINLSGDPKLTTQDLSRLIAQFKYAGIEKINGQVQLLTTA-NEQVRAPGWVW 207 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVASYYPVTMFSQVRTLPRGSA 212 +D+ C++AP + I+D NC L + + +++ P+ +F+Q R +P S Sbjct: 208 DDLGICYAAPVSRLILDGNCILAKLIPSQNGIKGETRLSISTSSPIKVFNQARFIPTSSN 267 Query: 213 EAQY--CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 + C+L + D N++ L+GC P + LA AV D Y A L+ KQ I Sbjct: 268 KQSRDLCQLSLARFDNNQYKLSGCYPSD-GGINLAIAVNDVEPYMLAKLEALFKQHQIVL 326 Query: 271 SGTLLRQT-----------------------QVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 + T +E ++AS S L +L MLK S+ Sbjct: 327 KHAINLLTDDDSALSAQFNEASSSKDEPSLVSDDEELRLIASHSSESLMAMLDTMLKDSN 386 Query: 308 NMIADTVFRMIGHARFNVP-----GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 N+IAD VF+ IG + + + S A L + G+ + + + DGSGLSR+ Sbjct: 387 NLIADRVFKTIGRSFYQTTHPQVSDNFTHASKAQLARLNE-MGIKLDSANLVDGSGLSRY 445 Query: 363 NLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ 422 N I+ A +M +++ I + + S LP AG G+L Y+ G + KV AKTG++ Sbjct: 446 NAISAAQLMSLIKLIYSDERFTSLDSALPEAGVSGTLAYKRGFQ-TKLRAKVKAKTGTML 504 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKD 472 GV N AG + T+ G FV +G Q L+ +Y+ Sbjct: 505 GVANFAGRMQTSQGDLY-FVILENGINPHQQAQHQVSSELLTAIMAIYET 553 >UniRef50_C3WBP8 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Fusobacterium RepID=C3WBP8_FUSMR Length = 555 Score = 322 bits (826), Expect = 2e-86, Method: Composition-based stats. Identities = 100/454 (22%), Positives = 204/454 (44%), Gaps = 37/454 (8%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 ++ +N+ + V+++ + Y+ PAS KVIT+ AL LG D R T + Sbjct: 127 EMLEHSNIGIEVREIESGEIIAQYNKGVAITPASIMKVITSATALEVLGADTRLETKVVY 186 Query: 89 KGNVEN-GVLKGDLVARFGADPTLKRQDIR--------NMVATLKKSGVNQIDGNVLIDT 139 G +++ G L GD+ G DPTL I+ ++ +K SG+ +I G++++ Sbjct: 187 DGKIDSEGTLTGDIYIIGGGDPTLGSDGIKKEQTAFITEWISKVKSSGIKKIKGDIIVID 246 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 ++F W W D + V N +++ L S K D+ + Sbjct: 247 NLFGYVGVEEKWLWEDFGTNYGQGTYGISVFDNLYTLYLSSTDKKIDI-LGTKPEIDGLK 305 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 ++++ PRG + L N+ L G +P + + + + A + G Sbjct: 306 FENRLKISPRGRRDFSVRGLPF----ENKRVLNGEVPANLKKIVTKSDIPNPALFLGQYF 361 Query: 260 KDELKQAGITWSGTLLR---QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 K LK +G++ SG + + + +A +SA + ++++++LK+SDN + +++ Sbjct: 362 KKNLKNSGVSVSGDIKTSRNSNKRPKNPKTLAITKSATIEEMVRVLLKRSDNHYTEHLYQ 421 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 ++ + + +++ G+D ++ DGSGLSR + ++ + + +L Y Sbjct: 422 LLKLKDVK-----------ISEFWKEK-GIDTKALVMLDGSGLSRGDYVSASILTDILAY 469 Query: 377 IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASG 436 + ++N F +LP GY+G++ L DG V K+GS+ G+ + G+I G Sbjct: 470 M--NENYPEFEKLLPRGGYEGTVSD--FLEPKVFDGIVRVKSGSMSGIQSYTGYIE-KDG 524 Query: 437 QRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 ++AF ++ + ++ +F + L+ Sbjct: 525 TKLAFTIIVNHWNGSRNRLKDEME---KFINNLF 555 >UniRef50_Q8DJ53 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DJ53_THEEB Length = 465 Score = 322 bits (825), Expect = 2e-86, Method: Composition-based stats. Identities = 102/452 (22%), Positives = 179/452 (39%), Gaps = 29/452 (6%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 + A E ++V+ + + ++ +++ L AS K+ T AAL G Sbjct: 30 LARAIAQEIQNPQWQRGQWGIVVEDLRSGEVLYNHQGEKLFLVASNVKLTTVAAALDYWG 89 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLI 137 RF TTL + L + DP+ QD++ M L + G+ QI ++ Sbjct: 90 ASHRFVTTLSARSPDRT-----TLRLQGSFDPSFSSQDLQQMATRLVQQGIRQIQ---VL 141 Query: 138 DTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP 197 + P W D+T A +++N + + P Sbjct: 142 ELGGVTPVRIEPTWAIEDLTMGNVAVVTRLSINQNALKLIATPQGLAQPLILQPPEGDLP 201 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 + ++ RT+P + E E+ + + G L + SEP + +++ Y Sbjct: 202 WPVVNETRTVPTDAPEFLESEVR-----GQQIIVRGQLHRGSEPAEMPIPLREPIPYLQQ 256 Query: 258 ILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 ++ QAGI + V+ S PL L+ +L++SDN A+ +F Sbjct: 257 QVQRAFAQAGIQVQ-QIRPMETAEPLPDVLVRHASPPLSRLILPILQESDNFYAEMLF-- 313 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 A RQ +Q GV ++ DGSGLSR N + P ++ +LQ + Sbjct: 314 ---------AALEAAQPGYRQRYLEQMGVP--GAVLVDGSGLSRQNWLTPKGLVTLLQQM 362 Query: 378 AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 A+ D+ + LPLAG G+L+ R L ++ AKTG+L+GV LAG++ + Sbjct: 363 ARSDHASLWRRSLPLAGRSGTLRQR--LRDTAAQDRLWAKTGTLRGVAALAGYVEPLEDR 420 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + F ++ A R + ++L Sbjct: 421 PLVFSMVVNQAGETTAHLRAGLDRIGVLLAQL 452 >UniRef50_B0U095 Serine-type D-Ala-D-Ala carboxypeptidase n=20 Tax=Francisella RepID=B0U095_FRAP2 Length = 485 Score = 321 bits (824), Expect = 3e-86, Method: Composition-based stats. Identities = 123/480 (25%), Positives = 215/480 (44%), Gaps = 26/480 (5%) Query: 4 SRFIIGLTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGASAPAIDYHSQQMA 58 + I+ + A+ I L A +A+ Q+ Y + Sbjct: 24 KLLVALSIFIISLNASYASTRSEIQSLVKKYNLTDAKIAIATQRTMTGNDLYSYAQNRSM 83 Query: 59 LPASTQKVITALAALIQLGPDFRFTTTLETKGN-VENGVLKGDLVARFGADPTLKRQDIR 117 PAS KV T ++ L+ + DFRFTTT+ N V N +L GD+ +F +P L + Sbjct: 84 KPASNNKVFTIVSGLLSIPDDFRFTTTILYPSNRVNNNILHGDMYIKFTGNPALTGGQLS 143 Query: 118 NMVATLK-KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 +++ +K + G+++I G+V + +F+ GW D T C+ AP ++ ++RNC + Sbjct: 144 SLIKKIKTEKGISKITGDVYLVG-VFSGPYTPEGWSKEDSTLCYGAPASSFTLNRNCTVI 202 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 L P + +++ + + + A D N ++G L Sbjct: 203 KLVKNPNSMTTRVVELSNASNIGIKNSATYTSASKATIISM------NDNNVLYISGYLS 256 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLH 296 R+ A+++ A + D L GI G ++ + +SA + Sbjct: 257 -RTAEKMFKLAIKNPALKTIDTVNDFLSSNGIKH-GNVIITGNIPAGYDTQLVTKSATIG 314 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 LK SDN+ A+T+ IG + G+ +AG++AV+ IL ++ G+D I DG Sbjct: 315 HFFDQTLKHSDNLYAETILNTIGLKEKGI-GSTKAGTEAVQSILYKKLGLDTSALTIYDG 373 Query: 357 SGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSA 416 SGLS + + P M+ L + F + LP +G G++ YR G + G+V A Sbjct: 374 SGLSHLDRVTPEFMVDFLTKTYNSEVGKQFYNYLPASGISGTISYRMGGK---LLGRVHA 430 Query: 417 KTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 KTG+L GV L+G++ TA R++F L+ ++ +D+ N R RF+ ++ Y+N Sbjct: 431 KTGTLAGVSTLSGYVLTAKNHRISFSIMLND--LKHSDRYNAR----RFQDKVVDVFYRN 484 >UniRef50_C1AB97 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Gemmatimonas aurantiaca T-27 RepID=C1AB97_GEMAT Length = 545 Score = 321 bits (823), Expect = 3e-86, Method: Composition-based stats. Identities = 107/474 (22%), Positives = 196/474 (41%), Gaps = 38/474 (8%) Query: 23 VDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 VD + A +++ + + + + ++ +PAS QK++TA AL LGPDFR Sbjct: 66 VDSVLAAPMWRNARWGILLVDAERNDTILSHDADRLFMPASNQKLLTAAIALQHLGPDFR 125 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLK--------RQDIRNMVATLKKSGVNQIDG 133 + T + G V GDL+ + DP++ ++ TL+ G+ +I G Sbjct: 126 WRTPVLLDGTQRGSVFHGDLLVQGSGDPSISDALRGGRASSAFDAILDTLQARGIKRITG 185 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 VL GW W+D +SA + + + + K G +R A Sbjct: 186 RVLPWGDALPGATTGFGWAWDDFDAGYSAAIDELTYNEGELYLHIVAGSKIGSPVTVRRA 245 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD--------LNRFTLTGCLPQRSEPLPLA 245 ++ + R +A + + P ++ ++G + Q + + Sbjct: 246 PTERYPAV-RIEAITRDTATSAVSAIAPRPMPLSVVYDSIGHQVVVSGTMSQG-DSTRVT 303 Query: 246 FAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTV---------------VASK 290 A + + A L D L+ I+ G ++ + + PG V + Sbjct: 304 LAYRHPSDAFLAALGDALRARKISVQGGVIARPAPHGPGRVASRSTKRAVAHAIDTLGVI 363 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +S D+L+ MLK S N +A+ +FR G+ G+ + + L G+ + Sbjct: 364 ESVSFADVLRRMLKPSQNQMAELIFRTSGYVASG-DGSLDSARAVGTRTLAG-WGITGQD 421 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 DGSGLSRH+ + P +++VL + + F LP+AG DG++ R + Sbjct: 422 VAYRDGSGLSRHDYLTPRAVVRVLDAMHRSPWYAVFRDGLPIAGVDGTIANR--MKDTPA 479 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G AKTG+L L+G++T++ G+ + F + ++V + + LVR Sbjct: 480 QGNARAKTGTLDKARALSGYVTSSDGRLLFFSLLCNNFSVPTREVERVQDLLVR 533 >UniRef50_A9M1W1 Penicillin-binding protein 3 n=27 Tax=Neisseria RepID=A9M1W1_NEIM0 Length = 515 Score = 321 bits (823), Expect = 4e-86, Method: Composition-based stats. Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 11/411 (2%) Query: 36 LALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENG 95 +A+ VQ++ + ID+ S PAST K++TA AA G ++R+ T ++ G V +G Sbjct: 78 IAVYVQELDSGKVIIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDG 137 Query: 96 VLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 L G+L DP ++++ + L++ G+ I G++++D S++ + D Sbjct: 138 TLDGNLYWAGSGDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFE-AD 196 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ 215 F PP ++ V + + + ++ +A Sbjct: 197 SGSPFMTPPNPTMLSAGMVMVRAERNAADST-DILTDPPLPHIFAQNNLKITASQAACPS 255 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 +L N L G +P+ P+ + + G S + Sbjct: 256 IKKLMRASFSDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIG 315 Query: 276 RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDA 335 E +A S P+ ++L M K+SDN+IA +VF +G +P + A Sbjct: 316 ISD-TPEGAQTLAVAHSKPMKEILTDMNKRSDNLIARSVFLKLGG-NGKLPAVSEQAASA 373 Query: 336 VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGY 395 VR+ L +G+D+ + ++ +GSGLSR + M Q+L+ +FI LP+AG Sbjct: 374 VRRELA-VSGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGT 432 Query: 396 DGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 DG+L+ R G + KTG+L V LAG+ + MA V ++ Sbjct: 433 DGTLRNRFKQSG----GLLRLKTGTLNNVRALAGYWL--GDKPMAVVVIIN 477 >UniRef50_B2KCL1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Elusimicrobium minutum Pei191 RepID=B2KCL1_ELUMP Length = 496 Score = 321 bits (822), Expect = 4e-86, Method: Composition-based stats. Identities = 96/475 (20%), Positives = 191/475 (40%), Gaps = 23/475 (4%) Query: 6 FIIGLTSCIAFSVQAANVD-EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 F+ + C + ++ A + ++ + + + V + + + P S Sbjct: 5 FLTFIILCFSLTLHGAEIKVPLQSEALKNTSYSFYAKYVD-GEDILTINPELRLTPGSLI 63 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTLKRQDIRN----- 118 K+ T AA+ +GP+ +F T + G G LKG++ + G DP+L I+ Sbjct: 64 KLFTTAAAIEYMGPEHKFKTEIYFDGKKNIFGTLKGNVYIKGGGDPSLGSNRIKTNPSME 123 Query: 119 -----MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 + ++ + +IDG+++ D S+F+ ++ P W DM F A A + N Sbjct: 124 EILDFWASRIESQEIKKIDGDIIADVSLFSGNNLPPKTAWEDMGNYFGATSEALNFNDNM 183 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 F++ P+ + S + + + + + + PG G Sbjct: 184 FTLRFKPQPQKLSLVEFDSMSPQVERISVKSYVVTDPFSSSDEIYIFAAPGQFELIA-RG 242 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR--QTQVNEPGTVVASKQ 291 +P ++ + ++ D + K+EL + GI +G T++AS Sbjct: 243 TVPIKTTASYVYASLPDPPLFTAQQFKNELLKRGIKITGRARVSYGNFNYTDKTLLASSY 302 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S L +++ I+ KKS N+ ++ + + I + G+ G V LR Q + N Sbjct: 303 SPALFEIINIINKKSFNLYSEVLLKNIAVFNTGI-GSTEQGIIEVENFLRAQNNL-TDNF 360 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML--PLAGYDGSLQYRAGLHQAG 409 I DGSGLSR++ + T++ L+ + + F + L P L+ + Sbjct: 361 KIYDGSGLSRNSFVNTKTVITFLENMTKKPYFEIFYNSLLTPAGEEKHRLKN--AFSNSP 418 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 + KTG L GV + +G+I +G+ + F ++ Y V + ++ Sbjct: 419 AF-DLHMKTGFLTGVRSYSGYIKDCNGKMITFSFIVNNYTVTTNEINKIFEDILS 472 >UniRef50_A4SZV9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Polynucleobacter necessarius RepID=A4SZV9_POLSQ Length = 513 Score = 321 bits (822), Expect = 5e-86, Method: Composition-based stats. Identities = 95/492 (19%), Positives = 192/492 (39%), Gaps = 33/492 (6%) Query: 7 IIGLTSCIA-----FSVQAANVDEYITQLPAGANLALMVQKVGASAP-------AIDYHS 54 +I SC A F + + +++ V ++ P +++H+ Sbjct: 21 LIIPLSCFAEGSNPFPIPKGITNSLERNQIPLDAVSISVIEIEPGRPGKQVAKTLLNWHA 80 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 + PAST KV+T L++L LGP +R+ T + T G + G LKG++ + DP L + Sbjct: 81 NEAMNPASTMKVLTTLSSLDILGPQYRWRTNVYTDGVIHQGTLKGNIYLQGTGDPKLVPE 140 Query: 115 DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF 174 ++ ++ L+ G+ +IDGN+ D S +A + + ++ P + Sbjct: 141 ELAKLMKDLQGLGIQKIDGNLFFDRSAYAPSVMETNTIDGESLRAYNVSPDPLLYAFRTL 200 Query: 175 SVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN------- 227 S L + + + + + +Q++ + + + + N Sbjct: 201 SFQLGKSRTADFIDLSYSPALSQLKVVNQMQLVDK-PCDNWKSNIRFNLDPENSSNTDQA 259 Query: 228 -RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW-SGTLLRQTQVNEPGT 285 +G P + + D ++ + AG W + V Sbjct: 260 ITAQFSGTFPSSCKGVNYNVVALDANTFLTQGFAAAWELAGGAWAQAPTGKSGNVPLAAR 319 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 ++ + L D ++ + K S+N++A + + + P T G ++ L+Q + Sbjct: 320 LLLQFEGINLGDDVQDINKYSNNVMARQLLLTLALEKMGKPATTANGDLVIQSWLKQNS- 378 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYR--- 402 ++ +I +GSGLSR+ I+ M Q+L F + LP+AG DG+++ R Sbjct: 379 MNFSGLVIENGSGLSRNEAISANQMNQLLLTARNLPISDIFYNSLPIAGTDGTMRNRLMT 438 Query: 403 --AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 + KTGSL V +AG++ + SG+ A +++ Sbjct: 439 QLRKFLHLKKKPEARIKTGSLADVRAIAGYVMSKSGKLYAVTSFINHPN-----AWKGLE 493 Query: 461 PLVRFESRLYKD 472 + + L +D Sbjct: 494 AHDQLLTWLLED 505 >UniRef50_C9RRN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RRN1_FIBSS Length = 715 Score = 319 bits (817), Expect = 2e-85, Method: Composition-based stats. Identities = 108/490 (22%), Positives = 198/490 (40%), Gaps = 27/490 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + + + + + V A+ Y+ L G+ + ++ V + + ++ P Sbjct: 5 FKVASLLPFFVAPLFAHVNVASYKSYVDSLLPGSRFGMSLRSVKMGKEIGNVNGNELFTP 64 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNV--ENGVLKGDLVARFGADPTLKRQDIRN 118 AST K +T AA+ L D+ T + G++ + L G L R DP + + + Sbjct: 65 ASTLKTLTTAAAIHLLPLDYEPKTEMTVFGDINKKKRTLTGTLKVRGEGDPNISARYYDD 124 Query: 119 -------MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 M +L+ GV+ I G + +DTS + KA W N + A + Sbjct: 125 PFYILNNMADSLRAMGVDTIVGQIDLDTSYYTGPWKAENWRRNYYDSWYGAEIGPLGFND 184 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 NC ++ + GD A + + V + + ++T+ + Y + D + T Sbjct: 185 NCVTIRFWPGYFIGDTAVVSIQPDVGYVKVVNNLKTVKGTKKKWVY----GIDPDKSIIT 240 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 L G + + + + +++ Y A LK GI + + S Sbjct: 241 LGGTIGEDIDSASMVLPIRNPIGYFRAAFMYALKDRGIVFKEDATIASNTELKK---FSY 297 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +APL +L + ++S N A+T+ R +G G+ G A R+ L+ G+ + Sbjct: 298 SAAPLLSILDEINQRSQNFHAETLLRNLGAQIAG-EGSVEGGRKAERRFLQD-MGLKASD 355 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGV 410 + DGSGLS N + P+T+ ++L +A+H +I+ G GS R +A Sbjct: 356 FEVFDGSGLSPENKVKPSTVARLLAKMARHPKGAYYINSFASPGV-GSGAKRMIDFEAPW 414 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI-----PLVRF 465 KTG + V+ L G+I T G + YL+G P + + L+ + Sbjct: 415 --LTRFKTGYIAEVHGLVGYIYTVDGDTLTAAMYLNGTNTNPDYKSKDVLDTLWMRLISY 472 Query: 466 ESRLYKDIYQ 475 + YK + Q Sbjct: 473 TNNNYKSLLQ 482 >UniRef50_D0LH25 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LH25_HALO1 Length = 514 Score = 316 bits (811), Expect = 9e-85, Method: Composition-based stats. Identities = 115/470 (24%), Positives = 197/470 (41%), Gaps = 14/470 (2%) Query: 14 IAFSVQAANVDEYIT--QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 A A +D + A + + VQ +G A + AS KVIT A Sbjct: 41 AAALSLGARIDALLAGHAPLTDARVGIFVQDLGTGAVLYAREAGNSFNVASVTKVITMAA 100 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 +L LGPDFR+ T + T +E V+ G+L + +PTL D+ + L+++G+ QI Sbjct: 101 SLALLGPDFRYRTAVLTD-KIEGSVVTGNLYLQPRGNPTLSSADLELLSTHLERAGITQI 159 Query: 132 DGNVLIDTSIFASHDKAPGWPWN-DMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 G +++D F P + + F AP AA ++RN F+V + +A G A + Sbjct: 160 RGELIVDAGYFDDAASPPHFDEQPEEQAAFRAPVGAANLERNAFTVRVRAARAGGQRAAV 219 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT-LTGCLPQRSEPLPLAFAVQ 249 + + + + S + + D + G + S+ + ++ Sbjct: 220 WIEPETSYVRLGRDEVITQSSGRDSVRVVSKLDDDGRMVVDVVGRVRAGSDTMGFRRRIE 279 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 D ++AG + L G+ R +V ++A+ S PL +++ + K SDN Sbjct: 280 DPVAFAGETFRAVLAARGLRIR-KPSRAGEVPSDARLLATVDSEPLSVMVQRLGKYSDNF 338 Query: 310 IADTVFRMIGH-----ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +A+T+ + I A P TW G AV + L Q G+D +GSGL + Sbjct: 339 VAETLLKTIAAEHRANADAAPPATWAEGVAAVERFLVDQVGLDDDAFRYENGSGLFDASG 398 Query: 365 IAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 +PA + VL +S L +AG DG+L+ R + + G+V AKTG+L Sbjct: 399 FSPAQVGAVLAAAQGDMRYGPELMSALAIAGVDGTLRGR--MKRTDARGRVRAKTGTLAA 456 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDI 473 V LAG+I F +++ + R + + + + Sbjct: 457 VIALAGYIDAGPRAPAVFAIFVNDIEPRWIARTAARRLQDQVVEAVIEHL 506 >UniRef50_C6VWR1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=3 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWR1_DYAFD Length = 492 Score = 316 bits (810), Expect = 1e-84, Method: Composition-based stats. Identities = 108/499 (21%), Positives = 190/499 (38%), Gaps = 37/499 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEY-------------ITQLPAGANLALMVQKVGASA 47 M + ++ + QA +D ++ +LA+ ++ V + Sbjct: 1 MMRTTLLLFCIFLGIRAAQAQVIDSAGLVRFSDAVLELQNSEFMRSGSLAVSIKAVKENK 60 Query: 48 PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGA 107 + ++ AST K+++ L G DF+F T LE G + L G+L Sbjct: 61 NVFSLNHERSLPSASTLKLVSTATVLALFGGDFKFQTFLEHDGIIRGDTLAGNLYIHGTG 120 Query: 108 DPTLKRQDIR----------NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT 157 DP+L + VA +K++G+ I G VL D S F A W W DM Sbjct: 121 DPSLGSDRFKGYPTAQEIITRWVAAVKRAGIRYIKGKVLADASFFDKEAVASTWIWGDMG 180 Query: 158 QCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI--RVASYYPVTMFSQVRTLPRGSAEAQ 215 + A + N + V GD + + ++ +QV T RGS + Sbjct: 181 NYYGAGVQGLNFNENLYRVKFKPGGDVGDPTSVLGTDPAIPYLSFTNQVTTGERGSGDKT 240 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 + N LTG +P + + ++ D A YA LK+ L G+ + Sbjct: 241 VIYSSPL---GNNVVLTGTVPAGNATFTVKGSIPDPAWYAAYALKNALSGNGVVVAEAAQ 297 Query: 276 RQTQVNE----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 P ++ +S PL +L + S N+ AD F+ G G + Sbjct: 298 PSGNAASTTQNPKRIIDEYKSPPLRELCQQTNFWSINLFADAFFKQSGKRLSGSSG-FDD 356 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 + A+ + G D+ I DGSGLS I +++ +L + + +F + Sbjct: 357 AATAITGYWSGR-GADLRGFYIKDGSGLSPSGSITASSLTDILNLANKDVSFKDFYQSIA 415 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGY-AV 450 + G +G++ R + G + AK+GS++G AG++ SG ++F Y Sbjct: 416 ILGQNGTV--RNLGKGSRAAGNMHAKSGSIEGTRAFAGYVNAKSGALLSFTIIAHKYVPG 473 Query: 451 EPADQRNRRIPLVRFESRL 469 + + L+ + L Sbjct: 474 SNRVISDSLVKLMTLMAEL 492 >UniRef50_A1KBR6 Serine-type D-Ala-D-Ala carboxypeptidase n=3 Tax=Rhodocyclaceae RepID=A1KBR6_AZOSB Length = 488 Score = 314 bits (804), Expect = 5e-84, Method: Composition-based stats. Identities = 120/433 (27%), Positives = 204/433 (47%), Gaps = 10/433 (2%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 AA +D ++PA A ++ VQ V S PA+ +++ + PAST K++TA AA Q Sbjct: 46 PPAVAAALDT--ARIPAEA-VSAWVQPVDGSPPALAHNAARPMNPASTMKLVTAFAAFSQ 102 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 LGP + + T + G V NG L+G+L GADP L +R ++ ++ GV I G + Sbjct: 103 LGPAYTWHTRVARAGEVRNGRLEGELFLIGGADPMLDEDRVRRLLRKVRGLGVQHIAGGI 162 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 ++D S A P + +++ P ++ N ++L+ A G + + Sbjct: 163 VLDASALALPPHDPALFDGRPLRPYNSGPYGLLMHYNTLQLALFPAEAGGPVTVVAEPPL 222 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 + + +++ G+ E L+ L+G LP + A ++YA Sbjct: 223 AGLALENRL-VGGSGACEPWQRGLEAALSPAGGLILSGSLPVACGVRNWSAAPLAPSAYA 281 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 A++ + G T +G +R+ T++ ++S PL D+++ M K S N+IA + Sbjct: 282 AALVGAVWGELGGT-AGNAVREAVTPGSATILLDEESRPLADVIRDMNKWSSNVIARQLL 340 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 +G N PG A Q AG+D +I +G+GLSR + T+ L Sbjct: 341 ATLGM---NQPGDAVQAGAAAAQRALAAAGIDTSGLVIENGAGLSRLERVRADTLAATLL 397 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 Q +I+ LP+AG DG+ + R L+ + +G KTG+L+GV +AG++T A Sbjct: 398 AAWQRPWMPEYIAALPVAGVDGTARRR--LNGSPANGYAHLKTGTLEGVRAMAGYVTDAR 455 Query: 436 GQRMAFVQYLSGY 448 GQR V ++ Sbjct: 456 GQRHIVVMMVNHP 468 >UniRef50_B5ECV6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Geobacter RepID=B5ECV6_GEOBB Length = 495 Score = 313 bits (802), Expect = 8e-84, Method: Composition-based stats. Identities = 113/454 (24%), Positives = 192/454 (42%), Gaps = 18/454 (3%) Query: 15 AFSVQAANVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 + + ++D + + + + V + +++ + + +PASTQKV TA+AAL Sbjct: 51 SAARLKNDIDAILAREFLPVTSAGIKVVSLKHGDTIYEFNPRLLLVPASTQKVFTAVAAL 110 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 LGPD TT+ + + D L D+ + A + Sbjct: 111 SILGPDREVATTVALDAAGAR------IYLKGCGDSLLSAADLATLAAAAASKLDKGREY 164 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 + D S F + GW W+D + V+ N S+ + K G A + Sbjct: 165 TLAADLSCFDDLYRGMGWMWDDDEMM----ISPLSVNHNAVSLLVKPGAKAGAPAVVTAE 220 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 + E+ N T+TG + S P +V Sbjct: 221 PRTSYYTVQNLTRTGSAKDESSIQASRRPGERDNVVTVTGVIALGSAPQVKQASVWRPEL 280 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 A + +D L+ G+ + T T VA S L ++++ LK SDN+ A++ Sbjct: 281 MALTLFRDALRAQGVKVTDMTTATTPA--GATEVAR-SSHSLEEMVRFALKTSDNVTAES 337 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + +++G G+ AGS VR+ L ++ G+ N ++ADGSGLSR+NL + TM+QV Sbjct: 338 LLKLLGLHGSGKRGSAEAGSAVVRRYL-ERQGIATDNVVVADGSGLSRYNLSSADTMIQV 396 Query: 374 LQYIAQHDNE-LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 L+ I + F LP+AG DG+L+ R + + +G V KTG+++GV LAG+ T Sbjct: 397 LRAIQRDPGLYRIFQESLPIAGIDGTLKNR--MKGSCAEGNVRGKTGNMKGVSALAGYAT 454 Query: 433 TASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFE 466 +A G+ AF + Y R + + + Sbjct: 455 SADGEPFAFSIIIQNYPRSGRQAREVQDRIAKLL 488 >UniRef50_B9Z6C9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Lutiella nitroferrum 2002 RepID=B9Z6C9_9NEIS Length = 477 Score = 313 bits (801), Expect = 1e-83, Method: Composition-based stats. Identities = 108/464 (23%), Positives = 195/464 (42%), Gaps = 16/464 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M+ R + L +++ A ++ Y A A V Y ++Q P Sbjct: 1 MKRLRAVALLMLA-CWTLPACALELYGIPADDIALWAA---PVEGKGVFAAYRAEQAVNP 56 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AST K++T +AL +L PD+R+ + L + + +GVL+GDL DP +D++ M+ Sbjct: 57 ASTMKLLTGWSALTRLTPDYRWHSELVSAAPLRHGVLQGDLYWIGSGDPRFANRDLQGML 116 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 TL+ G+ +I G +L+D F+ A + D+ + F P + + ++ Sbjct: 117 RTLRARGIERIQGRLLLDKRAFSRIGSASDFG-GDVGRVFMVDPDTHLTGLKVAWLRFFN 175 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 + V + S + G + + + + + +++G LP+ + Sbjct: 176 DGNGARVTL--DPPLAGVRLSSALSDGGEGPCDDVRRSVS-IQVENEQVSVSGALPRSCD 232 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 V D YA ++ G + V+AS S PL L Sbjct: 233 GAQSYVNVLDHDQYAAQAFAALWRELGGR-GPAASGRGTAPPEARVLASHDSDPLLVALA 291 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 + K S+N +A +F +G T AVR+ L + AG+ + +G+GLS Sbjct: 292 DINKYSNNTMARALFLTLGRVAGGSGDTVADAERAVRETLAE-AGISAAPLALENGAGLS 350 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R ++ + +VL+ A+ F++ LP+A DG+L+ R ++ KTG+ Sbjct: 351 RQERVSARLLGEVLRSAARGPYAGEFLASLPIAAADGTLKKRFANLGP----RLRLKTGT 406 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 L GV LAG+ A G+R+A V ++ + A+ +V Sbjct: 407 LDGVRALAGYWQAADGRRLAIVAIVN--SPRAAELVPALDRVVS 448 >UniRef50_Q7MUR9 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Porphyromonas gingivalis RepID=Q7MUR9_PORGI Length = 510 Score = 312 bits (800), Expect = 2e-83, Method: Composition-based stats. Identities = 104/478 (21%), Positives = 195/478 (40%), Gaps = 24/478 (5%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAG--ANLALMVQKVGASAPAIDYHSQQMALP 60 + F++ + S Q + I + + + + +++ + + + P Sbjct: 27 YLLFLLFAILGQSLSAQDRGAIDIIKKAERQTKSRIGVEIRRCRDDSLFVSNRRDEQFCP 86 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI---- 116 AS K++T+ + L G + F T + G + G+L G+L+ + G DP+L + Sbjct: 87 ASLVKLVTSASILRLRGTEIPFYTGVGMDGKIRKGILDGNLIIKGGGDPSLASNYLPTDS 146 Query: 117 ----RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRN 172 +V +K+ G+ +I G++++D S F W D F A ++ N Sbjct: 147 GRFAYALVDAVKQWGIKEITGDIIVDASAFDIEGVNDSWLDEDKGNYFGAGVYGFNINDN 206 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYP-VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 V L + + +R+ +P V +++ + RG A G + TL Sbjct: 207 RIDVILATGKAGSEAHILRIEPPHPEVRWENRIEVIHRGKDTAG----CYGEGLDLKRTL 262 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 TG LP L + D A Y A K L AG G Q + + Sbjct: 263 TGVLPTNIVSYRLKTDLPDPALYGAAWAKGLLSAAGTLCQGKCRASYQAVPITQELLIYE 322 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIG--HARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S PL L+++M +S N A+ + + ++ + T G +R Q G+ Sbjct: 323 SLPLDSLVRVMNFRSLNHFAEAFVKQLAPLASKNHRGNTTERGLSVIRNYWTSQTGLQHT 382 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE--LNFISMLPLAGYDGSLQYRAGLHQ 407 + ++DGSGLSR N +P + Q+L + + +F++ LPLAG +G+++ Sbjct: 383 DISLSDGSGLSRKNRFSPNALSQILIDMISRGDLVTTSFLNSLPLAGREGTVKNFMKDEA 442 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 K+GS++GV AG++ G+ + V + ++ +R L+ F Sbjct: 443 IEA----YLKSGSMKGVLGYAGYVRFQ-GEWYSVVLMGNDFSSSAPVRRAFSDFLLSF 495 >UniRef50_A0LLU5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LLU5_SYNFM Length = 430 Score = 311 bits (797), Expect = 4e-83, Method: Composition-based stats. Identities = 94/428 (21%), Positives = 168/428 (39%), Gaps = 15/428 (3%) Query: 47 APAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFG 106 ++ S++ +PAS KV+T+ AAL L P ++F T+L ++G L + Sbjct: 8 KVIWEFRSEEPLVPASLVKVLTSYAALKYLKPQYQFRTSLYALDEPRGDTVRGHLWIKST 67 Query: 107 ADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAA 166 D L +++++M LK+ G+ ++G V D S F + ++ +A Sbjct: 68 GDIFLLGENLKDMALRLKERGIRFVEGGVFADNSFFNPQAEQIC-LDERCASSYNPVVSA 126 Query: 167 AIVDRNCFSVSLYSAPKPGDMAFI-RVASYYPVTMFSQVRTLPRGSAEA--QYCELDVVP 223 ++ N + ++ K G + V + + RT + +A + Sbjct: 127 TSIEFNTIAFTVSGGAKSGTAPQVSWFPPGDYVQVDNLARTASKKAARVGLAVRSAGMTG 186 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP 283 RF +TG + R V D AS+ K+ L++ GI G V Sbjct: 187 TGRERFRVTGKVGPRRN-FEYRLNVDDPASFVARSFKEVLRREGIEVRGADAGPGTVPPG 245 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 + + +S L D++ + + S+N +A+ + R +G PGT G + VR+ L Sbjct: 246 AKPLVTHESRALGDIIYGLNRYSNNFMAEMLLRSLGGLVLGPPGTVDKGVELVRKSLVG- 304 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE-LNFISMLPLAGYDGSLQYR 402 GV + GSGLSR + +L + +FIS G +G+L+ R Sbjct: 305 LGVPPHEVQLKSGSGLSRECRASARAFCTLLANAYADPSIEPDFISSFATNGSEGTLRRR 364 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 V KTG+L+ V AG++ L+ + + R L Sbjct: 365 ICKPDVE----VRGKTGTLRDVVGFAGYVAGCGRGPYVVTVILNDVS----NIGEARRAL 416 Query: 463 VRFESRLY 470 F ++ Sbjct: 417 DGFLEQVP 424 >UniRef50_D2QIE9 D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QIE9_9SPHI Length = 514 Score = 311 bits (796), Expect = 4e-83, Method: Composition-based stats. Identities = 111/454 (24%), Positives = 189/454 (41%), Gaps = 26/454 (5%) Query: 22 NVDEYITQLPAG-ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 V+ + A +AL V++V S I Y+++Q AST K+IT A L P+F Sbjct: 47 QVEAFQASPAARFGTVALSVRRVRDSKELIGYNARQSLPSASTLKLITTATAFAVLNPNF 106 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----------IRNMVATLKKSGVNQ 130 +TTTLE G + + VL G+L R DP+L +++ ++K +G+ + Sbjct: 107 SYTTTLEYDGTISDSVLTGNLYIRGTGDPSLGSWRFSGYYDLTALLKSWSESVKNAGIRR 166 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 I G V+ D S++ WP+ D+ + A +A ++ N + V G + Sbjct: 167 IQGTVVGDASLYDDLTTPDTWPFGDLGNYYGASLSALNINENLYRVFFRPGKSIGMPTTV 226 Query: 191 -RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR--SEPLPLAFA 247 R P F T + Q LN+ LTG +P + + + Sbjct: 227 LRTDPLVPYLNFRNTVTTDAANTGDQVNIYGAPF--LNQQWLTGKVPLGEPANEFSVKGS 284 Query: 248 VQDGASYAGAILKDELKQAGITWS-------GTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + D A +A L+++L + IT S G L V+ +S L +L + Sbjct: 285 LPDPAYFAAYSLQNQLIRDNITVSSPPISLGGGLPATVSSTGKRVVLNQHKSPLLTELAQ 344 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 +S N+ A+ + R + A DA+ + + GV + I DGSGLS Sbjct: 345 QTNFQSINLYAEALLRTTAITLDKSVRSTAASIDALTTYWKSK-GVLMDGFRIRDGSGLS 403 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 + M +L + + F +P+ G G++ R G + AK+GS Sbjct: 404 TVGALTADNMTGILSTMGREKAFPPFYETIPIIGQTGTV--RNLARGTAAAGNIRAKSGS 461 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 ++GV AG+ T A G++M+F ++ + Sbjct: 462 IEGVRAYAGYFTAADGEQMSFCILVNKFTPGQNR 495 >UniRef50_C6MX86 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geobacter sp. M18 RepID=C6MX86_9DELT Length = 503 Score = 310 bits (795), Expect = 7e-83, Method: Composition-based stats. Identities = 112/454 (24%), Positives = 194/454 (42%), Gaps = 18/454 (3%) Query: 15 AFSVQAANVDEYITQ-LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 + + +D + + + + V + D++ + + +PASTQK+ TA AAL Sbjct: 57 STARLKRKIDAILAREFLPVTTVGIKVISLRKGDTIYDFNPRLLLVPASTQKLFTAAAAL 116 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 LGPD TT++ G + D L D+ + A + Sbjct: 117 SLLGPDREVTTSVALDAAG------GRAYLKGCGDSLLSGADLAALAAAAASKMDKGREY 170 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 ++ D S F + GW W+D + V++N ++ + P G A + Sbjct: 171 SLAADLSCFDDLYRGKGWMWDDDEM----LISPLSVNQNAVTLLVQPGPGAGAPAVVTAE 226 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 + + G + N T+TG + S PL +V Sbjct: 227 PHTSYYTVENLARTGTGKEPSSIQAARRPGDRDNVVTVTGVIALGSAPLVKHASVWRPEL 286 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 A + +D L+ G+ + T VVA L +L++ LK SDN+ A++ Sbjct: 287 MALTLFRDALRAQGVKVTSMTAAPTPA--GAAVVARVP-RRLEELVRFALKTSDNVTAES 343 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + +++G PG+ +GS AVR L ++ G+ N ++ADGSGLSR+NL + TM ++ Sbjct: 344 LLKLMGLQASGQPGSGESGSAAVRGYL-ERQGIPTENLVLADGSGLSRYNLSSAETMTRL 402 Query: 374 LQYIAQHDNE-LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 LQ I F LP+AG DG+L+ R + + +G + KTG++ GV L+G+++ Sbjct: 403 LQAIHLDPELYRIFQQSLPVAGKDGTLKGR--MKGSCAEGNLRGKTGNMSGVSALSGYLS 460 Query: 433 TASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFE 466 +A G+ +AF + YA R + + Sbjct: 461 SAEGEPLAFSIIIQNYAGSGRQAREVQDRIAALL 494 >UniRef50_Q0VN35 D-alanyl-D-alanine-carboxypeptidase n=1 Tax=Alcanivorax borkumensis SK2 RepID=Q0VN35_ALCBS Length = 502 Score = 309 bits (792), Expect = 1e-82, Method: Composition-based stats. Identities = 109/478 (22%), Positives = 187/478 (39%), Gaps = 19/478 (3%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQL-PAGANLALMVQKVGASAPAIDYHSQQMAL 59 + + G + A V E L A +LA+ + A ++ Sbjct: 23 LLLGTLLAGSAQADIPAPVMAPVLEVAESLELAETDLAVASIPLDGPGKARFMNADIPLN 82 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 P S KVIT AAL LGP F++ T L T G +E L G+L DP L + + + Sbjct: 83 PGSIMKVITTYAALELLGPTFQWHTRLYTDGTIEGETLSGNLYFVGSGDPKLTEERLWLL 142 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW--NDMTQCFSAPPAAAIVDRNCFSVS 177 + L+ G+ I G++++D S+F + + ++ F P + + N + Sbjct: 143 LRELRAMGITHITGDLILDGSVFNLPNGITAFNDDGDNPNAPFLVEPNGLLTNLNVLRIR 202 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY---CELDVVPGDLNRFTLTGC 234 + + + + + +Q+ G +Y E T+TG Sbjct: 203 ARADNRGIHTW--TEPALNGIHINNQLVLREYGHCPRRYQFDYEPTTRDDGSISITVTGV 260 Query: 235 LPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAP 294 LP + A Y GA+L +Q G T SGT+ + ++ + S Sbjct: 261 LPVGCSTSSYLSLLSQPA-YTGALLSSLWQQLGGTLSGTIREGLRPRADTELLVTTSSRD 319 Query: 295 LHDLLKIMLKKSDNMIADTVFRMIGHA--RFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 L +++ + K S+N++ VF +G + A +R L + G+D + + Sbjct: 320 LVTMVRDINKWSNNVMVRQVFLTLGAKHRQPGDKDDLAAAEREIRAWLAHK-GIDSRSMV 378 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 +G+GLSR I M Q+LQ + I+ LPL DG+++ R G A + G Sbjct: 379 FENGAGLSRIERITARQMAQLLQQAWESRFAAELIASLPLVAMDGTMRRRLG--NANMAG 436 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 KTGSL+ V ++AGF A V ++ L F +++ Sbjct: 437 MGHIKTGSLRNVRSIAGFTRDEDNTTWAVVAMVNNP-----RAWQSEPVLDAFIEQVH 489 >UniRef50_C1DDI4 DacB n=1 Tax=Laribacter hongkongensis HLHK9 RepID=C1DDI4_LARHH Length = 478 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 112/473 (23%), Positives = 193/473 (40%), Gaps = 21/473 (4%) Query: 1 MRFSRFIIGLTSCIAFSVQAANV---------DEYITQLPAGA--NLALMVQKVGASAPA 49 M+F S ++ +V A + + +P + +L++ + V AP Sbjct: 1 MKFKHISDKSHSWLSAAVLVAGLLGPAGWAVAAPALPGVPGLSARDLSVWIAPVEGGAPW 60 Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 + + + PAST K++T+ AAL LGPD+R+ T + + +G L GDL + DP Sbjct: 61 LSHRANVAVNPASTMKLVTSFAALDLLGPDYRWRTRWLSPAAIRDGHLTGDLYWQGSGDP 120 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIV 169 R + +M T++ G+ QIDG +L+D +F + + D + + P A + Sbjct: 121 AFDRDALADMARTIRARGIGQIDGRLLLDGQVFRTLGSSSELDP-DEGRSYQVGPDALLT 179 Query: 170 DRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRF 229 ++L + P A + + + ++++ G L Sbjct: 180 QFKTVELTLLATPSGW--AVRPAPALPGLQIDNRLQRDDSGRECPSAARLVSQTVRGQEV 237 Query: 230 TLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVAS 289 L+G LP+ + L V D A + QA +A Sbjct: 238 RLSGRLPESCDGSHLYVPVFDHARFQSEA-FAAAWQAAGGQGQPAAASGSTPAGARELAR 296 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S PL +L + + S+N++A VF +G A T R + AVR L + G+D Sbjct: 297 HDSPPLSQVLTDLNRYSNNVMARQVFLTLGAANPQSGDTARDAASAVRASLARH-GIDTQ 355 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 +G+GLSRH + A + ++L+ F S+LP G +G+L+ R Sbjct: 356 GFAFENGAGLSRHERVTAAGLGEMLRAAQATPFWAEFASLLPRPGGEGTLKRRL----PA 411 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPL 462 + + KTG+L V LAG++ A G+R A V + + A L Sbjct: 412 LAEQARFKTGTLNDVRALAGYL-DAGGRRWAVVLIANRAGISNAQLDQVLEGL 463 >UniRef50_C6X6E6 D-alanyl-D-alanine carboxypeptidase n=1 Tax=Flavobacteriaceae bacterium 3519-10 RepID=C6X6E6_FLAB3 Length = 475 Score = 309 bits (791), Expect = 2e-82, Method: Composition-based stats. Identities = 97/478 (20%), Positives = 192/478 (40%), Gaps = 56/478 (11%) Query: 1 MRFSRFIIGLTSCIAFS------VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHS 54 M + + S +AF+ ++ A + + ANL++ V +Y+ Sbjct: 19 MNRLIVVALMASNVAFAQNVGQKLRTATQNLLASTPAYSANLSVYVAD-ENGEFVYEYNG 77 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ 114 Q ASTQK+ TA AAL LG ++++TTT G + NG L +L + DPTL Sbjct: 78 NQGLSTASTQKIFTAAAALETLGTNYQYTTTASYSGTISNGNLSENLYIQSNGDPTLGSW 137 Query: 115 DIR---------NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 ++ L++ G+ ++ G+++ID S F GWPWND+ + A Sbjct: 138 RYDGYKPENFRNKLIEALRQKGIRKVSGDLVIDDSYFNFQTVPGGWPWNDIGNYYGAGVW 197 Query: 166 AAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 N F +++ G + ++ + ++T + L Sbjct: 198 GVNWRENQFDLNMNGKEMKGQNVDLPNVAW-----VNDLKT-----GGSSDQSLIYTAPF 247 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQT------- 278 + ++G LP ++ + ++ A + G +K +AGI ++G + + Sbjct: 248 SDVAYISGTLPAKN--ITVSGATPNPPLTLGMEIKTWFNEAGIEFNGKVTTASMQQINGE 305 Query: 279 --QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 V ++ +S L ++ ++KS N +T+ + +G + N G++ AG + Sbjct: 306 KIPVAPKSNIILEHKSPTLDKIVYWFMRKSVNFYGETLIKTLGKEKKN-EGSFDAGIAYL 364 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 ++ + + G+ ADGSGLS N ++ +Q L + + F P Sbjct: 365 KEFWKGK-GISPAMINFADGSGLSPQNYVSARAEVQSLLWSRKQPWFNAFFEGFPT---- 419 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 + K+G+++ + AG+ T+ G++ F ++ Y + Sbjct: 420 -------------QTNSMKMKSGTMKDTKSFAGYHTSKDGKKYVFAIIINNYQGSNSS 464 >UniRef50_A1U2Q6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Gammaproteobacteria RepID=A1U2Q6_MARAV Length = 523 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 101/450 (22%), Positives = 189/450 (42%), Gaps = 19/450 (4%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 L + L++ V + ++ + P S K++T AAL LGP + T Sbjct: 64 KSLNSDEALSVAVIPLNGPGIEQYVNADTLMSPGSIMKLVTTYAALELLGPTHHWKTDFL 123 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 T G + L+G+L RFG DP L + + + + LK G+N+I+G++++D S F Sbjct: 124 TDGMMVGDSLEGNLYVRFGGDPKLTLERLWSTLRELKSMGINRIEGDLVLDGSYFRVDGG 183 Query: 148 APGWPW--NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 P + ++ F P+ + + N + + + V++ ++V Sbjct: 184 FPTFEDNGDNPHAPFLVEPSGYLTNLNLLHFQVRADERGTQAWTT--PDLGEVSIDNRVT 241 Query: 206 TLPRGSAEAQ-YCELDVVPGDLNRFT--LTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 LP G A+ + + V + ++ T +TG LPQ + Y+ ++++ Sbjct: 242 ALPEGPCPARSRFDWEPVFHENHQVTVRVTGQLPQGCRSTTYLSLLPH-ERYSASVIRSV 300 Query: 263 LKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA- 321 L GI SG + E +V S L +++ + K S N++A + IG Sbjct: 301 LSDMGIIVSGGDRFEN-TPEDARLVMRATSPDLVSMVRDINKWSSNVMARQMLLTIGAEF 359 Query: 322 -RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 + + AG V + L + G++ +I +G+GL+RH I Q+LQ Sbjct: 360 RKEDDKDDRVAGIRTVYEWL-ENTGINTAGMVIDNGAGLTRHGRITARQGAQILQQAWDS 418 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + ++ +P+ DG++ R +G++ KTG L+ V ++AGF + A Sbjct: 419 PYASDLMASMPIIAMDGTMARRLRNTGMDGEGRI--KTGYLENVRSIAGFTRDDNNTTWA 476 Query: 441 FVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 V ++ N + L R L+ Sbjct: 477 IVGMVNN-----DPAWNGQAVLDRVLYSLH 501 >UniRef50_C2FZN6 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=2 Tax=Sphingobacterium spiritivorum RepID=C2FZN6_9SPHI Length = 457 Score = 307 bits (786), Expect = 6e-82, Method: Composition-based stats. Identities = 104/470 (22%), Positives = 177/470 (37%), Gaps = 42/470 (8%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 ++Q A +L V + Q AST KVIT+ AL L Sbjct: 11 AIQQAYSTFEQQANLRYGIASLTVLDSKTGNVIFSKNGQTGLPTASTLKVITSATALDLL 70 Query: 77 GPDFRFTTTLETKGNVEN-GVLKGDLVARFGADPTLKRQD---------IRNMVATLKKS 126 G +F F T L G +++ G LKG++V G DPTL + V ++ + Sbjct: 71 GSNFTFKTKLYYTGEIDSLGTLKGNIVIEGGGDPTLASSRFEGMNEETLLNKWVYAIQNA 130 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ ++G+++ D F + GW W D+ + A + N V + G Sbjct: 131 GIKCVEGSIIGDDRFFNGNTVPGGWIWTDIGNYYGAGVSGLNWRENSVGVQFKAGNTAGS 190 Query: 187 MAFIR--VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 A + + + ++ T +GS + Y R + G + + Sbjct: 191 KATLTSLTVDSSYLDIHNETLTGSKGSGDNVYAYSAPYS---TRIYIRGTYGLDLK-KTI 246 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA-------SKQSAPLHD 297 AV D A A L+ L++AGI L Q++E G +A +S + D Sbjct: 247 EIAVPDPAFDAAFQLQKSLRRAGILTENEPLTGKQLSERGETIAKDRKELDVHESPKMQD 306 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 ++ +KS N+ +T+ + IG T A D V++ + + + G I DGS Sbjct: 307 IVYWFNQKSINLYGETLLKTIGMYSGQKIETADAA-DMVKKFWKAKLNIPEGELNIVDGS 365 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 GLS N + M +++ Y + F LP ++ K Sbjct: 366 GLSPQNRVTSLAMAKIMNYAKTRNWYDIFYKSLPT------------------YNEMKMK 407 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 +G++ GV G+ T+ +GQ F ++ Y + R L+ Sbjct: 408 SGTIGGVLGYTGYHTSKAGQEYTFTLLVNNYEGSGSAMRKSMFGLLDILK 457 >UniRef50_A6GAN1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6GAN1_9DELT Length = 662 Score = 307 bits (786), Expect = 7e-82, Method: Composition-based stats. Identities = 108/488 (22%), Positives = 186/488 (38%), Gaps = 61/488 (12%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 ++ I + A +++ V+ + ++ DY + PAS KV+T+ AAL LG DF Sbjct: 117 ELEAIIADVDERARVSVHVRDLSSARVLFDYDGDRALNPASNHKVLTSAAALDLLGEDFE 176 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T + G +L G DPT+ + +R + A + + ++ID + Sbjct: 177 FETRVLRVGA--------ELYLVGGGDPTIDGEALRELAAQVAERVTVNELERIVIDDTA 228 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 F PG+ + AP A + N +++Y A + Sbjct: 229 FTERQFGPGYSTGGDGVSYMAPSGALSANFNTVEITVYPASGTKTPLVRLEPDSTHAYVV 288 Query: 202 SQVR-----TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 ++ R +L ++ + E D R + G LP+ S V D + G Sbjct: 289 NRSRYSSSASLAVSTSAIAWPEPGPRHHDFTRVEIEGGLPRGSRGYRFRRRVADPGMFTG 348 Query: 257 AILKDELKQAGITWSGT-LLRQTQVN--------------------------------EP 283 L ++ S +R+ + Sbjct: 349 GAFARALAD--VSHSEALPVREGRAPVVEELDELDVLELLDSQDDGGGLPRSVHRSEGPD 406 Query: 284 GTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQ 343 +VA ++S PL +++ +L S+N IA+ + R +G PG+W G +R + Sbjct: 407 VELVALRRSPPLSEIVAGLLAYSNNFIAEQLLRTLGWKTTGQPGSWDNGGAVLRGYW-EA 465 Query: 344 AGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ-HDNELNFISMLPLAGYDGSLQYR 402 G +GSGLSR ++ A +++VL + H+ LP+AG G+L R Sbjct: 466 VGNAPEQLRFENGSGLSRVGRVSAAGLVEVLASSYRTHEGRPALFEALPVAGSKGTLGGR 525 Query: 403 AGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR-MAFVQYLS------GYAVEPADQ 455 +V AKTG+L GV L G IT SG+ +AF ++ G + + Sbjct: 526 LLRSGQ----RVRAKTGTLDGVSGLTGVITAESGEPQVAFSILINAREDWEGTGLVAPLR 581 Query: 456 RNRRIPLV 463 R +V Sbjct: 582 REVEDAIV 589 >UniRef50_Q8TPE4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Methanosarcina acetivorans RepID=Q8TPE4_METAC Length = 568 Score = 305 bits (781), Expect = 2e-81, Method: Composition-based stats. Identities = 103/519 (19%), Positives = 207/519 (39%), Gaps = 72/519 (13%) Query: 12 SCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 S + + A+V E + A ++V+ + + ++M +P ST K+ T Sbjct: 69 SPLEGNPLPASVTEIMNDTKYDHAFWGILVEDLETGEVVYQLNPEKMFIPGSTTKLYTGA 128 Query: 71 AALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQ--------------- 114 AAL +G D+RF T + +GNV+ +G L GDL+ D T+ + Sbjct: 129 AALDIIGADYRFETPIYARGNVDSSGNLNGDLILVASGDLTMGGRTTPDGKIDYTDIDHS 188 Query: 115 -----------------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMT 157 + + + +G+ + G+V+ID +F + D Sbjct: 189 YANSIGNAILTTPDPLSGLDQLAQQVSAAGIKSVSGDVIIDDRLFDKINPP------DSA 242 Query: 158 QCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYC 217 ++ +++ N + + A + + V T Sbjct: 243 NDYT--LTPIVINDNLIDIMVKPAQPGMAAEVDWRPQTAAYAIEADVVTTDANETA---- 296 Query: 218 ELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ 277 +++ G ++G +P + + + V D +S+A ++L + L++ G+ + ++ Sbjct: 297 RIEISTGGPGIINVSGQVPAGEDTIVQTYTVDDPSSFARSLLIEALERQGVKVNASVKGN 356 Query: 278 TQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 VA S P + LK+++K S NM AD++ ++ ++ Sbjct: 357 NPADLLPATTNYSEFERVALLTSLPFSENLKLIMKVSQNMQADSLLPLMAVKEGKR--SF 414 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 G R L ++ G+D+ I+DG G S + + P T + +L+Y++ ++ + Sbjct: 415 WDGLIIERSFL-EKTGIDLNAVSISDGRGNSPADYMTPRTTVDLLRYMSSGNDSQVYRDA 473 Query: 390 LPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQ--GVYN---------LAGFITTASGQR 438 LP+ G DGSL + ++ GKV AKTG+ V N L G++ T+ ++ Sbjct: 474 LPILGVDGSLA-TSVGPESPAKGKVQAKTGTTAKYDVVNDRLILCSQALGGYMNTSEDRK 532 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 +AF Y++ V+ + + + IY+ N Sbjct: 533 LAFAIYVNNVPVKDV---KEMKQVSNDLGSICEAIYEEN 568 >UniRef50_A3YAM6 Hypothetical D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine- endopeptidase n=1 Tax=Marinomonas sp. MED121 RepID=A3YAM6_9GAMM Length = 496 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 142/499 (28%), Positives = 229/499 (45%), Gaps = 35/499 (7%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + F I AA + P GA + + ++Q +A P Sbjct: 8 FKQGCFKAAFIFLICLISMAAQSQALLNNAPKGALV-------ITQSDWHSQNTQYLANP 60 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGN-VENGVLKGDLVARFGADPTLKRQDIRNM 119 AS K+ TA A LG ++RF T L + G L G L DP+ ++D+ + Sbjct: 61 ASLMKIFTATLATETLGKNYRFKTELAYDETSLNQGRLTGPLTLTLTGDPSFTQKDLHTL 120 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + TL K+GV ++D V ID S + H + G WND CF+AP +AA+++RNC +L Sbjct: 121 LMTLAKAGVKKLD-KVEIDASRYQGHAWSLGQVWNDHGICFAAPTSAAMINRNCVFGNLK 179 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + KPG +A P+T+ +QV T+ +A+ C++ + N + LTGC+ ++ Sbjct: 180 AT-KPGQVAHFYQTPNSPLTVENQVVTIEA--NKAKGCQVLLKVLGANHYRLTGCIDEKR 236 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAG------ITWSGTLLRQTQVNEPGTVVASKQSA 293 + LPL F+ + ++ I EL G I++ + S SA Sbjct: 237 KTLPLGFSANEANTFFAHIFMQELILLGFGSEIEISFIDQAPSWLAKTDKSVKRISHHSA 296 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQI---------LRQQA 344 PL L+ MLK+SDN++AD +F+ GH F A + + L + Sbjct: 297 PLTKLVARMLKRSDNLVADALFKASGHQYFLSENAGAASFETLDAYQKGSLALMSLLDKN 356 Query: 345 GVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAG 404 +D ++ DGSGLSR NL+ ++ QVL+ H + + LP+A G+L+ R Sbjct: 357 QIDSQGLVVRDGSGLSRENLLYATSLYQVLELWLSHPKFVWLVEALPIAAQSGTLKNRES 416 Query: 405 LHQAGVDGKVSAKTGSLQGVYNLAGFITTASG----QRMAFVQYLSGYAVE----PADQR 456 L + G+V AK+GS+QGV NLAGF+ A + FV ++ ++ PA Sbjct: 417 LKHDMLKGRVLAKSGSMQGVVNLAGFVQVADENKGLKLRPFVFMVNQFSKSKAVKPAKFS 476 Query: 457 NRRIPLVRFESRLYKDIYQ 475 + L +FE+ ++ Sbjct: 477 VEELSLFKFEAGFLTQGFR 495 >UniRef50_Q0BKW3 Possible S13 family peptidase n=10 Tax=Francisella RepID=Q0BKW3_FRATO Length = 464 Score = 302 bits (773), Expect = 2e-80, Method: Composition-based stats. Identities = 104/443 (23%), Positives = 192/443 (43%), Gaps = 21/443 (4%) Query: 10 LTSCIAFSVQAANVDEYITQL-----PAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 + SV + +++ + A +A+ + + + ++ + +PAS Sbjct: 17 VFIAYPLSVNSIELNQVLDNSIEQNNLQSAQIAVKIIDSEKNTVILSKNADKNFIPASNT 76 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++T +A L+ LG DFRF T L + +L F DP+ R+D+ ++ +L Sbjct: 77 KLLTGIAGLLFLGKDFRFETKLYYDKINNQSI--DNLYIEFSGDPSFTREDLHKLLISLH 134 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 K + N+ F D + AP + ++ N ++ L Sbjct: 135 KK-NIKNIKNIYFVNRYFEGRDTPINQSNTSSIFGYGAPSSIYNLNENAITLQLIPQSN- 192 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 S + + + S E N L GCLP S Sbjct: 193 -----TFEVSQSVGEKINFINKIFIASVEQLKTCQFNAYYKDNTLVLNGCLPSNS--YTF 245 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 +FA++D + EL Q I+ + ++ + T++A +SA L LLK M Sbjct: 246 SFAIEDPQQQMQQAVLAELAQLKISLDTQIKTTNKLPDNLTLLAKHKSADLTQLLKHMFV 305 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 SDN+ A T+ R IG+ +N G+ +G +A+ +IL+ + +D + + DG+G+S +NL Sbjct: 306 TSDNLYAQTITRTIGY-YYNQVGSIVSGKNAIIKILKTKLNLDTDSIQLEDGAGMSENNL 364 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 ++ ++ +LQ I+Q+ N +LP+ G G+L+ R + GKV AKTG+ V Sbjct: 365 LSANFIVSLLQKISQNKNFELLKCLLPIYGETGTLKNR---SSKLLKGKVFAKTGTETTV 421 Query: 425 YNLAGFITTASGQRMAFVQYLSG 447 L+G++ A+ ++ F ++ Sbjct: 422 VALSGYL-YANNKQYIFSILVNN 443 >UniRef50_Q1QDN4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QDN4_PSYCK Length = 707 Score = 301 bits (771), Expect = 4e-80, Method: Composition-based stats. Identities = 91/467 (19%), Positives = 180/467 (38%), Gaps = 51/467 (10%) Query: 48 PAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGA 107 P +++ PAST K++ + AL LG DF + T + G + L GDL+ + Sbjct: 245 PLLNHQPDIARTPASTMKLVPSFIALDILGADFVWHTRVYHTGIIIGNTLLGDLIIQGSG 304 Query: 108 DPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 DP + + ++ ++ +K +G+ IDG++++D++IF K P N + ++A P Sbjct: 305 DPKMTHERLQQLLYKVKAAGIRHIDGDIIVDSTIFNHVTKDPAAFDNAPLRPYNASPDGF 364 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 +V+ + + Y + S++ P +A+Y Sbjct: 365 LVNFSTIGIQSYPLNN-AQAQLTYTPQLADYKLPSKINIRPSACGQARYSLAPQWQA--T 421 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT-- 285 + T LP A D +A ++K + + T +G ++ Q + Sbjct: 422 QLTFDTSLPDNCGNHAFYVAYPDAKDFAARVIKAKWQALDNTLTGNVVAQETPYKNKKSI 481 Query: 286 -------------VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH------------ 320 + S S L + + S+N++ + V IG Sbjct: 482 SARGLAALPMSPLPIVSYPSLNLTQQIYDINHFSNNVMTEQVALSIGAYHKPKDETVNPT 541 Query: 321 ---------------ARFNVPGTWR--AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 +F P T A + + + + + +GSGL R Sbjct: 542 INKNVDKAINSQHSLYQFGKPATTSYPAALQTINEWWQTH--LSTPPPHLTNGSGLCRDC 599 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS-LQYRAGLHQAGVDGKVSAKTGSLQ 422 I+ A + ++L Y H + +++ L +AG G+ L + L ++ G+ KTG+L Sbjct: 600 TISAANLSELLTYAYAHPSFNAYVNSLGIAGVSGTILTHSERLPESNAIGRAWIKTGTLN 659 Query: 423 GVYNLAGFITTASGQRMAFVQYLSG-YAVEPADQRNRRIPLVRFESR 468 V ++AG++ SGQ V ++ A+ R ++ + ++ Sbjct: 660 NVTSMAGYVKGLSGQDYVVVGLINNEQALNTYTARTVLDAMLDWTAQ 706 >UniRef50_Q2CEY9 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Rhodobacteraceae RepID=Q2CEY9_9RHOB Length = 516 Score = 297 bits (761), Expect = 6e-79, Method: Composition-based stats. Identities = 110/469 (23%), Positives = 175/469 (37%), Gaps = 27/469 (5%) Query: 14 IAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 ++++ + +++ V + Y + + PAS K +TAL AL Sbjct: 50 ATAPAVRPSLEQIVENSRVLGSVSAAVADIETGELIEGYAADEGLPPASVTKAMTALYAL 109 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 LGPD+RFTT L G V GVL+GDL G DPTL ++ ++ LK +G+ ++ G Sbjct: 110 ETLGPDYRFTTRLVALGEVREGVLEGDLALVGGGDPTLGSNNLGDLAKALKAAGITEVAG 169 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 L+ + + ++ + ++ N + + D+ V+ Sbjct: 170 RFLVWGGALPHEHEIDTDQLD--HLGYNPAISGLNLNYNRVHFAWARSGSGYDVTMEAVS 227 Query: 194 S-YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 Y P S++ R Y D + G R V++ A Sbjct: 228 EGYAPAVATSRMTVEDRTLPVYTYASRDDIDEWTVARRQLGDGGAR------WLPVREPA 281 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 YAG + + + GI L + GT +A SAPL +L+ ML S N+ A+ Sbjct: 282 LYAGDVFRTIARSEGIELDAAELVEEAP--EGTEIARHDSAPLVTILEEMLLYSTNLTAE 339 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 V P + A + A+ LR GV D SGL + I M++ Sbjct: 340 VVGLSATRELHGRPDSLLASAQAMNDWLRDTYGVTSA---FVDHSGLGDRSRIGAGEMVK 396 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 + D + L+ AG G V AKTG+L V L G+IT Sbjct: 397 MFVAPGVMDKLRPIL-------KRHVLKDDAGAPIDGYPATVRAKTGTLNFVSALGGYIT 449 Query: 433 TASGQRMAFVQYLSGY------AVEPADQRNRRIPLVRFESRLYKDIYQ 475 TA G+ +AF + + P RL +D+ Q Sbjct: 450 TAEGKTLAFSIICGELEAREAGEASGDEIPDGARPWNARARRLQQDLLQ 498 >UniRef50_Q1IJW4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1IJW4_ACIBL Length = 1076 Score = 295 bits (756), Expect = 2e-78, Method: Composition-based stats. Identities = 119/518 (22%), Positives = 197/518 (38%), Gaps = 71/518 (13%) Query: 1 MRFSRFIIGLT-------SCIAFSVQAANVDEYITQLP-AGANLALMVQKVGASAPAIDY 52 M+ R ++ S A S A V+E +T+ A A + + + + Sbjct: 1 MKRFRILLPAFFLATTWVSAQAPSDLAQRVEEIMTRPEFAHATFGMQFYSLKSGKVVYEL 60 Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTL 111 ++Q++ +P ST K+ T AL LG D+RF T + G ++ NG L+GD+V DP L Sbjct: 61 NAQKLMVPGSTTKLFTEGTALETLGADYRFHTRIYHTGTLKSNGTLEGDIVLVASGDPNL 120 Query: 112 KRQD------------------------------IRNMVATLKKSGVNQIDGNVLIDTSI 141 + IR + GV ++ G VLID + Sbjct: 121 SGRIQPDGTLGFENEDHSYGGVDSRGVGSDPLLVIREFAQQIASKGVKRVKGRVLIDARL 180 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYP-VTM 200 F + G + +V+ N V G A +++A V Sbjct: 181 FPQGTRELGT---------GVVMSPIVVNDNLIDVIATPGATEGAPAQLKIAPETSYVRF 231 Query: 201 FSQVRTLPRGSA-EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 ++V T GS E Y + P T TG LP +++ V D A YA +L Sbjct: 232 VNKVTTGKTGSKLEFDYSDPQPGPNGSQVVTATGSLPLGKPVGMVSYPVPDPARYAQVVL 291 Query: 260 KDELKQAGITW------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 + L+ I +P ++A S PL + +KI LK S N+ A Sbjct: 292 SEALRSQKIEVEIPANNDADFKALEPSYKPENLLAEHVSPPLSEEVKITLKVSQNLHASM 351 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 ++G + V + G+D+ +DG+G + P +++ Sbjct: 352 TPYLLGALAGHATKDIDQAGFDVEHDFLSKVGLDLTAASQSDGAGG--NAFFTPDFVVKY 409 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQ 422 L ++A + F LP+ G DG+L + G V AKTG+ L Sbjct: 410 LVHMASSKDAALFRRGLPILGRDGTLAKIE--TDSPAAGHVFAKTGTYFVSDALNKNLLV 467 Query: 423 GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 LAG++ T+ G +AF Y + +V ++ ++I Sbjct: 468 TGKGLAGYMETSGGDELAFAIYANNVSVPMDSEQAQKI 505 >UniRef50_C3J9L9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Bacteria RepID=C3J9L9_9PORP Length = 483 Score = 293 bits (751), Expect = 8e-78, Method: Composition-based stats. Identities = 107/470 (22%), Positives = 198/470 (42%), Gaps = 34/470 (7%) Query: 17 SVQAANVDEYITQLPAG--ANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + A VD I A + VQ V Y +++ PAS K++TA AL Sbjct: 28 PLALARVDSLIRASEESGVARYSFAVQDVSQDTLWAAYRPEELCTPASITKLVTAATALE 87 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRN--------MVATLKKS 126 LG D+ F T L +G ++ GVL G+L+ DP++ + ++ T++ Sbjct: 88 SLGADYSFCTELYMEGELKRGVLYGNLLVIGSGDPSIDSKFFEQDKERWQQSVLQTVQAK 147 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +I+GN++ID S F P W +D ++A + N + + Sbjct: 148 GIRRIEGNIVIDASRFERMGIHPRWAPDDRGDYYAAGVYGFNLYDNWLDLYFATGGVEDS 207 Query: 187 MAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLA 245 + + + + ++++ + + Q E D +R TL G LP E + +A Sbjct: 208 IRLVGTYPKGVQLALDNRLKV----NCKTQGWEGDGANLVEHR-TLLGTLPCNRESVRVA 262 Query: 246 FAVQDGASYAGAILKDELKQAGITWSG-TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 + +A +L+ L+ G+ G R + P T++ S L DL + M Sbjct: 263 IDLPHPPLHAARLLRATLEGQGVEILGQEEARFESSSHPRTLIGRYYSPSLRDLCREMNY 322 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN-TIIADGSGLSRHN 363 +S N A+ +F+ + T A ++IL GV + + DGSGL+R N Sbjct: 323 RSLNHYAEALFKALVKENG---ATSNAAWLREQEIL-SNWGVTLSPKAHLYDGSGLTRAN 378 Query: 364 LIAPATMMQVLQYI---AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 ++ M+ +L + A+ + F LP G +G+++ + + K+ K+GS Sbjct: 379 RLSAQDMVALLVGVSTKARGNTLDAFAQSLPRVGREGTVKS--FMPGTSL--KLYCKSGS 434 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 ++GV AG++ + A +G A++ R + ++ L+ Sbjct: 435 MRGVQTYAGYLYYQR-RVYAVALLANGC----ANRAKVRQVMQQYIEGLF 479 >UniRef50_A3VVH9 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VVH9_9PROT Length = 471 Score = 293 bits (750), Expect = 9e-78, Method: Composition-based stats. Identities = 103/474 (21%), Positives = 180/474 (37%), Gaps = 43/474 (9%) Query: 29 QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 Q AG + V + I + S++ +PAS K+ AAL L+ Sbjct: 5 QALAGLRYGISVTDLD-GNVLIAHRSEERFMPASNAKLFVTAAALAAAAELSAVERGLQV 63 Query: 89 KGNVENGVLKGDLVARFGADPTLK------RQDIRNMVATLKKSGVNQIDGNVLIDTSIF 142 + L L DPT+ + + + SG+ +I+ +++ D F Sbjct: 64 MSVRGSSGLP-SLTLVGRGDPTVGFGPGCEMPCLETLAEAVADSGITEIE-DIVGDDRWF 121 Query: 143 ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFS 202 A + GW W+D+ ++ ++ V+ N + + + PG Sbjct: 122 ADERRPLGWSWDDLKFGYATSISSIAVNDNILPLRVRPSESPGAQVQTAWLDAGDGYFTL 181 Query: 203 QVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 Q + S+ L+ G+ L G +P S + L V D A A + Sbjct: 182 QNQAKTSASSGELALRLERREGER-AARLYGEMPSGSRSMTLDLGVDDPAHLAVWYFEQA 240 Query: 263 LKQAGITWSGTLLRQTQV---------------------------NEPGTVVASKQSAPL 295 LK G+T G L + + G V+AS + P+ Sbjct: 241 LKAEGVTVQGELRSRHRALQYTDETIKADLDDPDSPKTCRVSPPVKSDGVVIASLPATPI 300 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 D++ + + S N+ A+ + R +G + G + + L GV + AD Sbjct: 301 RDIVNTINRDSQNLYAEVLLRQLGWIEG--TASSFCGLLHIERFLND-VGVPRSSYDFAD 357 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD-GSLQYRAGLHQAGVDGKV 414 SGLS +N + PAT+ +L+Y A D + LP+ G G+L+YR ++ V Sbjct: 358 ASGLSSYNRVTPATITALLRYAAAQDWGDAYRESLPVGGAPIGTLKYR--FRGTALENNV 415 Query: 415 SAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 AKTG+L V L+G++ SG+ + F ++ +E R L+ + Sbjct: 416 FAKTGTLNHVDALSGYLVAQSGKVLVFSIIVNDRPLESLSAMERIESLLLQIAE 469 >UniRef50_B6BV24 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=beta proteobacterium KB13 RepID=B6BV24_9PROT Length = 460 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 97/481 (20%), Positives = 198/481 (41%), Gaps = 26/481 (5%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M II A+S + A ++ Q + A ++ + + + Sbjct: 1 MIRFFLIISFFVTTAYSQELAIKNKINPQ-----DFAYSIKNISTGES-WSKDADKSFNF 54 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS K++TA AL +LGPDF+F T + ++ L GDL+ + DPTL ++++++ Sbjct: 55 ASVNKLVTATIALDELGPDFKFRTLFFSSKQIKENTLAGDLIIKGEGDPTLSIENLKDIF 114 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LK G+NQI GNV +D S F + + + ++ P + +++ + + Sbjct: 115 YRLKARGINQITGNVFLDDSYFKLQP-NREYIDDLSYRAYNVQPKSLLIEAGAIEIQFLN 173 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEA-QYCELDVVPGDLN-RFTLTGCLPQR 238 ++ + + + ++ + + +V+ D + + +L G ++ Sbjct: 174 QDNN--VSIYNKPFIEGIEVVNNLKITKEACEDWKSKIQPEVIFTDESMQISLNGSFSKK 231 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEP---GTVVASKQSAPL 295 + L D Y + + L + I ++G + +Q +E ++ S PL Sbjct: 232 CKNKSLYLNALDQDEYMKVAISNILDEVEIEFAGEIQKQGFADEELNSFVLLDEHFSDPL 291 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 + L+ M K S N+ + + + D + ++ G+ I + Sbjct: 292 NQLMYQMNKYSLNLFSRNLALTAMKQKTEFDAD-EFNVDIYFKSWFEKKGISANEFFIEN 350 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 G+GLSR + ++L +I + D + IS LP+AG DG+L+ + Sbjct: 351 GAGLSRSSHANTFLFQEILVFIEESDWKSEIISSLPIAGIDGTLKS--MFKEKSFSNATH 408 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQ 475 KTG L+ V+ L+GF+ ++ G+ L+G + ++F + +YQ Sbjct: 409 LKTGRLKNVFALSGFMKSSKGEEYIVTFVLNGP---------QYQSFLKFIEQSLDYLYQ 459 Query: 476 N 476 + Sbjct: 460 H 460 >UniRef50_Q31LV5 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Synechococcus elongatus RepID=Q31LV5_SYNE7 Length = 449 Score = 292 bits (747), Expect = 2e-77, Method: Composition-based stats. Identities = 104/451 (23%), Positives = 181/451 (40%), Gaps = 21/451 (4%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + + A ++ + Q ++ + + Y + + +PAS QK++T +AA Sbjct: 5 SLCPAALPARLEALLRQ-DRSVRWSIAIADLD-GRSLFRYRAAEALIPASNQKLLTTIAA 62 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L +LGPD R T L + + + L+ DP+ R I + AT+ ++ + Sbjct: 63 LNRLGPDARLQTRLWLQPSRQ------TLIVEGAGDPSFDRAGINALAATVPS---DRYN 113 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 + +D S W D Q + AP I N ++L + + Sbjct: 114 QLIGLDDPA--SSYWPAAWSGLDRLQGYGAPLNRLIFLENAHQLTLQPRSLGQPLGVLWE 171 Query: 193 ASY--YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 + ++ RT+ +AE + D T+ G L SE +A A Sbjct: 172 DPLDRQRWQVRNRSRTVSSQAAEFINLDRDP---QRPILTVAGQLRAGSESEAVAIAATQ 228 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 L+ L AG + S L+ + ++ + +S PL +L++ + S N+ Sbjct: 229 PGQRFLEALQIRLGTAGSSISTVSLQTNWPSGDRILLTTVESPPLRELIRTTNEDSQNLY 288 Query: 311 ADTVFRMIGHARFNVPG-TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ + R IG + P RA A Q G+ ++ DGSGLSR N ++ T Sbjct: 289 AEALLRWIGRSGQPDPVRDRRAADQAELGRALQAIGISTTGLVVDDGSGLSRRNRVSAQT 348 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 +++ L + Q LP+AG G+L+ R + + G+V AKTG L G L+G Sbjct: 349 LLEALLWQVQQPTNQALRDSLPIAGSSGTLRRR--FANSPLRGRVQAKTGFLTGAAGLSG 406 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRI 460 FI + +AF + R R+ Sbjct: 407 FIDLPNYGPIAFSILANQPNATSLTSRIDRL 437 >UniRef50_UPI00016C4C4A serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C4C4A Length = 520 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 116/519 (22%), Positives = 205/519 (39%), Gaps = 71/519 (13%) Query: 10 LTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + + A A E IT P A+ +++ + M PAS K+ Sbjct: 19 VPAPAAPPDGLAEKLEAITGAPDYKHASWGILIVDAKTGGTVYARNPDAMLAPASVTKLF 78 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQ------------- 114 T AAL+ LGPD + T + +G V G L+GDLV D L + Sbjct: 79 TCAAALVTLGPDHKRETAVYQRGIVLKGTLRGDLVLVASGDLMLGGRTKDGRTVFKDKDH 138 Query: 115 -------------------DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND 155 + + +K +G+N+I+G VLID +FA + G + Sbjct: 139 TYANGGFGDCEVTDTDPLAGLNALAKQVKDAGINEINGEVLIDDRLFA-RTRGSGSGPD- 196 Query: 156 MTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQ 215 +V+ N V + K G A + + + + A A Sbjct: 197 -------AVTPIVVNDNAIDVVVTPGEKEGAPATVTMRPETSLYTMDATVSTAAAGATA- 248 Query: 216 YCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLL 275 + ++P +F + G +P +P F V + AS+A A+ + L++AG+ +L Sbjct: 249 --NIQLIPIGATQFAVRGTVPVGGKPQLRVFNVDEPASFARALFVEALRRAGVRAQCAVL 306 Query: 276 RQTQV-------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGT 328 R V E VA+ SAP D + + LK S N+ A + ++ A+ T Sbjct: 307 RPGAVLLPPKADYEKLPKVAALASAPFKDTVTVTLKVSHNLYASAIPCLLAVAQG--AST 364 Query: 329 WRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFIS 388 AG R +L+ GVD G+G ++ + ++ +Q+LQ +++ + + Sbjct: 365 LDAGLKEERAVLKD-LGVDTNAISFGGGAGGAQSDYVSARATVQLLQGMSKRSEWDAYKA 423 Query: 389 MLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQGVYNLAGFITTASGQ 437 LP+ G DG+L + GK AKTG+ L LAG +TT +G+ Sbjct: 424 ALPILGVDGTLSDAVKD-DSPARGKAHAKTGTLLWYDAANERFLLKSKALAGSLTTKNGK 482 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 + F ++ + +R ++ +L + ++++ Sbjct: 483 ELLFCVMVNNVPLPKGVISSREGKMLG---KLCEVLHEH 518 >UniRef50_A6GSV9 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Limnobacter sp. MED105 RepID=A6GSV9_9BURK Length = 467 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 105/430 (24%), Positives = 172/430 (40%), Gaps = 28/430 (6%) Query: 50 IDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADP 109 + S Q+ PAS KV T AL +L +RF T +GVL G L + DP Sbjct: 53 YAHGSSQLVNPASVAKVFTTALALQKLESTYRFKTGFHAVSEPVDGVLAGPLYIKGSGDP 112 Query: 110 TLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWND-----MTQCFSAPP 164 D+ + L+ GV+ I+G V++D S FA + G D + + A P Sbjct: 113 AFLSADLWASLRQLRTKGVDIINGPVVLDDSAFAEQLPSLGLAEEDAFDDAPHRAYHAQP 172 Query: 165 AAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPG 224 A +++ S+ L + + + S++ L G A + V Sbjct: 173 DALLLNFGAMSIDLKINEN--TVLVVPEEAPKDWAFVSEIN-LTGGGCGAWKNGMSVDFA 229 Query: 225 DLNR---FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT---LLRQT 278 R T+ G P+R L V + +++ + G ++G + + Sbjct: 230 KAGRDVVVTVKGNYPRRCGQSRLPIRVPAQDWLWESWVQEIWLELGGKFAGPQGGQVIKG 289 Query: 279 QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQ 338 + + PL DL+K + K S N++A + + GT A + ++ Sbjct: 290 VTPANTIALYTHYGKPLSDLIKQINKWSSNVMARHLELAVA-------GTPEAFNVQLKD 342 Query: 339 ILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGS 398 L+QQ G+ + +GSGLSR I + + L+ +A + +F++ P AG DG+ Sbjct: 343 WLKQQ-GISSNDWFFENGSGLSRDTRIDAKGLAEFLRNMAARSDFPDFLASFPRAGADGT 401 Query: 399 LQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 L R VDG KTGSL GV +L G++ GQ A + + D Sbjct: 402 LHRRV----TNVDGFAYLKTGSLNGVRSLGGYLRDREGQLWAVGVLV--KSPRAYDSWGP 455 Query: 459 RIPLVRFESR 468 L+ F R Sbjct: 456 MESLLEFLYR 465 >UniRef50_C6X4B5 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Flavobacteriaceae RepID=C6X4B5_FLAB3 Length = 486 Score = 291 bits (745), Expect = 4e-77, Method: Composition-based stats. Identities = 92/457 (20%), Positives = 176/457 (38%), Gaps = 53/457 (11%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + AN +V Y+ + AST K++T A+ LG +FR+ T LE Sbjct: 68 DPVLRNANWGFVVFDPKTKKIVSSYNENTPLIAASTTKLLTTDTAMSLLGSNFRWHTQLE 127 Query: 88 TKGNVE-NGVLKGDLVARFGADPTLKRQD---------IRNMVATLKKSGVNQIDGNVLI 137 G V+ +GVL+G+L DP+L + + + L + G+ +++G+++I Sbjct: 128 HSGTVDADGVLQGNLYIVGSGDPSLGTNKAGASSYSAVVSDFLYALSEKGIKKVNGDIII 187 Query: 138 DTSIFAS---HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 T IF + W + + + Sbjct: 188 QTGIFKANKMQRLPENIVWLENGSYYLPAGSTF--------------------------- 220 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 ++ ++ + + + + + + E L V D +Y Sbjct: 221 --QISPQNEKLIAKSSNPFNENKNFYYISPYIKQMV----YADKFEGAGLTTKVADPPAY 274 Query: 255 AGAILKDELKQAGITWSGTLLR--QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 ++ + + G+ SG ++ E T VA S L +++ + ++SDN +A+ Sbjct: 275 LANTMRASMIKKGVHVSGKVITKITDVDPEIRTKVAVYASPTLGEIVHYINQRSDNALAE 334 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 R +G + T +G V L+ D DGSGLSR N++ P + + Sbjct: 335 ATLRTVGFQKEGDQ-TLESGRRVVTDHLKS-INFDTSGLNYMDGSGLSRGNVVTPISQAK 392 Query: 373 VLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFIT 432 L + + LP+AG G+L+ +G++ AKTG+L V LAG++ Sbjct: 393 FLTGLMDEKYFKTYFESLPVAGQSGTLKNTFTGEG---NGQIFAKTGTLNKVKTLAGYLK 449 Query: 433 TASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 T +G+ + F ++ Y + R +++ +L Sbjct: 450 TNTGKTLVFSLLINNYGGSVDQVKVRMEQILKPALQL 486 >UniRef50_Q7NYZ7 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Chromobacterium violaceum RepID=Q7NYZ7_CHRVO Length = 463 Score = 290 bits (743), Expect = 6e-77, Method: Composition-based stats. Identities = 116/420 (27%), Positives = 186/420 (44%), Gaps = 10/420 (2%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 +A+ V APAI + + PAST K++T AAL +LGPD+R+ T L + Sbjct: 25 LKPDEIAVWAAPVEGDAPAITHRADAPVNPASTMKLLTGWAALNRLGPDYRWKTALLSAA 84 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 VE G LKGDL G DP D+ +++ +L+ G+ Q+DG +L+D F + Sbjct: 85 PVEGGALKGDLYWLGGGDPRFDNGDLLSLLYSLRLRGIRQLDGRLLLDKRAFGNVG-GAD 143 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 D + F P A + + ++ ++ + +A V + + + P Sbjct: 144 DFDGDAGRAFVVGPDAHLTNLKVAWLTFFNDGQGARVAL--DPPLAGVELRAALTPGP-D 200 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 A + D R +TG LP + V D ++AG + G + Sbjct: 201 QPCADVRRFVSIDNDGRRVRVTGSLPPACDGQRAYVNVLDHDAFAGQDFSALWQALGGSG 260 Query: 271 SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWR 330 + R + + +AS QS PL L + K S+N +A T+F +G A T Sbjct: 261 PLRVAR-GRAPDDARELASWQSQPLAVALSDINKYSNNTMARTLFLTLGRAAGG-EDTAA 318 Query: 331 AGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISML 390 A A+R+ L + D G + +GSGLSR + + +VL A+ FI+ L Sbjct: 319 AAERALREELSLRGIADAGALRLENGSGLSRRERVTARLLGEVLLDAARGPYAGEFIASL 378 Query: 391 PLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV 450 P+A DG+L+ R ++ KTG+L V LAG+ A G+R+A V ++G Sbjct: 379 PIAATDGTLKKRFVELGP----RLRMKTGTLNDVKALAGYWQAADGRRLAIVAIVNGPRA 434 >UniRef50_C0YRR0 D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=C0YRR0_9FLAO Length = 457 Score = 290 bits (743), Expect = 7e-77, Method: Composition-based stats. Identities = 99/475 (20%), Positives = 188/475 (39%), Gaps = 49/475 (10%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 I IA + A D + + L+ V +Y + ASTQK+ Sbjct: 14 IVAAQNIAQKLDKATKDLMDSSGAISSGLSFYVSD-ENGNLIYEYQGNKGLSTASTQKIF 72 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI---------RN 118 TA AAL LG ++ +TTT GN+ G L G+L DPTL + Sbjct: 73 TAGAALETLGKNYTYTTTSSYSGNISAGTLNGNLFISSNGDPTLGSWRYEGYKPENFKKK 132 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 ++ +K SG+ +I G+++ID S F GWPW+D+ + A N F +++ Sbjct: 133 LIDAIKNSGITKISGDLVIDDSYFDHQTIPGGWPWDDLGNYYGAGVWGINWKENQFDINI 192 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 V + ++T + L + + G LP Sbjct: 193 NGTDFKS-----FSYPLEGVKWLNDLKT-----GGSSDQSLIFTAPHSDVALINGMLPSG 242 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT---------VVAS 289 + + ++ + + A +K LK++GI SG + +Q+ G ++ + Sbjct: 243 -KTVTVSGSTPNPPLQLAAEIKQWLKESGIELSGKAVTNSQLEIDGKQALEALKNNIILT 301 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 QS L ++ L+KS N+ +T+ + +G + +++G +++ + + G++ Sbjct: 302 YQSPTLDKIVYWFLRKSINLYGETLIKTLGKEKKG-NSNFKSGVSYLKEFWKSK-GINPN 359 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 ADGSGLS N +A +Q L Y + + P+ Sbjct: 360 MINFADGSGLSPQNYVAAKAEVQALLYARKQSWFEAYYDGFPV----------------- 402 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 D + K+G+++ + AG+ T G++ F ++ Y + + + +++ Sbjct: 403 QDNGMKMKSGTMRDTKSFAGYHTAKDGKKYVFSIIINNYQGSGNAELQKILNVLK 457 >UniRef50_A9DV35 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=12 Tax=Rhodobacterales RepID=A9DV35_9RHOB Length = 510 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 106/442 (23%), Positives = 165/442 (37%), Gaps = 23/442 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 NV E I +A V V + ++ PAS+ K ITAL AL QLGPD Sbjct: 31 NVSEIIADSGITGTVAFAVIDVESGIWLEASNATDGIPPASSIKAITALYALDQLGPDHV 90 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV-LIDTS 140 F T L G V NG ++GDL+ G DPTL ++ M LK++G+ + G + + S Sbjct: 91 FETRLLATGGVVNGEVQGDLILVGGGDPTLDSDNLGKMAEELKEAGIIGVKGKFKVYEGS 150 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAF-IRVASYYPVT 199 + ++ P P ++ + ++ N D+ R A Y P Sbjct: 151 LPSTFAIDPEQPD---HVGYNPGVSGIALNYNRVHFEWKRDGNGYDVTMEGRAARYAPAV 207 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + + + R Y + G R ++ YAG + Sbjct: 208 RAASMEVVDRSGPVYTYENRPDRDVWTVAKSALGSGGAR------WLPIRRPGVYAGDLF 261 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 + GI L + G + + +SA L +LK ML+ S N+ A+ V Sbjct: 262 ATIARSHGIKLGDAELAE--ALPEGETLVTHRSAKLQPILKDMLEYSTNLTAEMVGMAAS 319 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 R + RA + + + ++ G + N + D SGL + + M L I Sbjct: 320 SKRLGTVASLRASAAEMNKWAVEELG--MENPAMVDHSGLGDDSKMTVHDMAGGLARIHG 377 Query: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 P+ L+ G Q K+ AKTG+L V LAGF+TT + + Sbjct: 378 TGLRPILK---PV-----YLRDDRGRPQTNGPIKIDAKTGTLNFVSALAGFLTTPEDRVL 429 Query: 440 AFVQYLSGYAVEPADQRNRRIP 461 AF + R R Sbjct: 430 AFAILTANMDQRAKIPRAERER 451 >UniRef50_A5WCW6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Psychrobacter sp. PRwf-1 RepID=A5WCW6_PSYWF Length = 682 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 93/513 (18%), Positives = 185/513 (36%), Gaps = 71/513 (13%) Query: 24 DEYITQLPAGANLALMVQKVGASAPAI---DYHSQQMALPASTQKVITALAALIQLGPDF 80 + + A A+ V + P + S+ PAST K+I AL LGP+F Sbjct: 172 ESASNDSASDALAAVNPSTVDDNQPLAYPLRHLSELPRTPASTMKLIPTFIALDLLGPNF 231 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTS 140 + T G + L GDL+ + DP L Q + ++ +K++G+ I G++++D+S Sbjct: 232 VWVTQAYHTGFISANTLYGDLIIKGSGDPKLTLQRLNKLLEQVKQAGIQHIKGDIVLDSS 291 Query: 141 IFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS---APKPGDMAFIRVASYYP 197 +F K P ND + ++A P +V+ + ++ + G Sbjct: 292 VFQGVTKDPAAFDNDPLRPYNASPDGLLVNFSTLELTAVPLLNDAQRGTAKLYYKPLMAD 351 Query: 198 VTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGA 257 + + + T G+ + L + LP A D +A Sbjct: 352 YDLPTTLPTASLGNCSSARSSLAPI-WQAQGLKFNKSLPTSCGARTFYIAYPDAKDFAKR 410 Query: 258 ILKDELKQAGITWSGTLLRQT--------------------------------------- 278 ++K + G T SG++ Sbjct: 411 VVKGQWLSLGNTLSGSIKFLGLGNTVAGDMINTETPLKTSAGTYLDMSSSTDKNAVLAQS 470 Query: 279 --QVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI-------------GHARF 323 + S PL + + S+N++ + + + GHA Sbjct: 471 VSVLPASPLPFVRYPSLPLSQQIFDINHYSNNVMTEQLTLTLPLFSDPSAAPDTTGHAIK 530 Query: 324 NVPGTWRAGSDA---VRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 ++ + A + Q Q + ++++GSGL R + + +LQ+ H Sbjct: 531 PQKDSYSNYTKALGTINQWW--QKNLSTPAPVMSNGSGLCRDCSVTAENLADLLQFAYNH 588 Query: 381 DNELNFISMLPLAGYDGSL-QYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 +++ L +AG G++ ++ L + G+ KTG+L V ++AG++ SGQ Sbjct: 589 RYFDTYVNSLGVAGISGTITEHAERLPSSAAIGRAWIKTGTLNNVTSMAGYVHGKSGQDY 648 Query: 440 AFVQYLSGYAVEP----ADQRNRRIPLVRFESR 468 V ++G + + R ++ + ++ Sbjct: 649 IVVGIINGSTNQAPLNTYEARYVLDTMLDWTAK 681 >UniRef50_Q28L64 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Rhodobacteraceae RepID=Q28L64_JANSC Length = 493 Score = 285 bits (730), Expect = 2e-75, Method: Composition-based stats. Identities = 91/441 (20%), Positives = 158/441 (35%), Gaps = 19/441 (4%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 E I G + V V + PAS K ++ L +LGP++R Sbjct: 44 EAAEIIRDAGLGGRVGFAVADVATGEILEVVNPLYPLPPASVAKTVSCAYGLDRLGPNYR 103 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 F T L + G + +G L GDL DP + M L G+ ++ G ++ T Sbjct: 104 FRTRLVSNGVLADGRLDGDLWLVGSGDPLFDTDALAAMADDLVNMGLREVTGRFMVATGA 163 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVASYYPVTM 200 + P ++ +A ++ N + ++ R AS P Sbjct: 164 LPEIWQID--PSQLPHVGYNPAISALNLNFNRVHFEWERVGEDYTISMDARSASLRPAVQ 221 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 +++R R + Y + + G + V+ A+Y + + Sbjct: 222 VARMRVEERTTPVYTYSDAESHDAWTVARGALG------DAGSRWLPVRRPAAYMAEVFQ 275 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + + G+ + E V+A S PL ++L+ M++ S N+ A+ V M Sbjct: 276 TLMGRHGVRLPSPTYELS-APETALVLAEHVSDPLDEILRGMMRWSTNLTAEVVGLMATQ 334 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 A + A+ +++ G N D SGL + I P M L Sbjct: 335 ATGQSASSLPESGAAMTAWMQETLG--ARNATFVDHSGLGVGSRIRPQDMTHALVSAGSD 392 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + + +P ++ R G G +V AKTG+L V LAGF SG+ +A Sbjct: 393 SLLRDLMKDIP-------MRDRDGNVIQGHPIEVVAKTGTLDFVSALAGFARMPSGRDLA 445 Query: 441 FVQYLSGYAVEPADQRNRRIP 461 F + + A ++R Sbjct: 446 FAIFSADLDRREAIPDDQRER 466 >UniRef50_B6B3Z9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2083 RepID=B6B3Z9_9RHOB Length = 503 Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats. Identities = 98/472 (20%), Positives = 179/472 (37%), Gaps = 28/472 (5%) Query: 12 SCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + + A++ I G + V + + PAST K ITAL Sbjct: 45 APAQVARTASSSKALIDAAQLGGAVGFAVADLSTGKLLETKNKAIGLPPASTAKAITALY 104 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 AL LGP+ RF T + T G++ GV+ DL G DPTL + +M A LK G+ ++ Sbjct: 105 ALDALGPNHRFATRISTNGSIAGGVISEDLFLIGGGDPTLDTNALASMAAQLKSLGIREV 164 Query: 132 DGN-VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 G +D ++ D P P ++ + ++ N + Sbjct: 165 RGQFFYVDNTLPNLRDIDPSQPD---HVSYNPAISGLNLNFNRVCFEWRRGSNGYAITMD 221 Query: 191 -RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQ 249 R + P S+++ R Y + G +++T+ + V+ Sbjct: 222 ARSTKHRPNVYISKMQIAARDLPVYTYKD----GGKFDQWTVAR--GALGKGGSRWLPVR 275 Query: 250 DGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNM 309 YA + + + GI +++ + + + SAPL +L+ MLK S N+ Sbjct: 276 KPGLYAADVFQTFARSQGIILKNP--KRSTKSPKTRALVTHTSAPLTTILRDMLKFSTNL 333 Query: 310 IADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 A+ V R + +A + + + + +GN D SGLS + ++ Sbjct: 334 TAEVVGLTATRKRGGRATSLKASAKDMSRWANTA--LSMGNASFTDHSGLSDASKVSAQG 391 Query: 370 MMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 M+ + + + P A D R + + KV+AKTG+L V L+G Sbjct: 392 MLNAMIVARRRAGFAQLLK--PFAMRD---AKRKLIKNHPI--KVNAKTGTLNFVSALSG 444 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRI------PLVRFESRLYKDIYQ 475 +IT G+++AF + +++ + R L + + + Sbjct: 445 YITAPDGKQLAFAMICADTNRRRGIKKSNKEAPQGGRAWNRRAKALQQKLIE 496 >UniRef50_C8XK26 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=2 Tax=Actinobacteria (class) RepID=C8XK26_NAKMY Length = 554 Score = 284 bits (726), Expect = 6e-75, Method: Composition-based stats. Identities = 108/467 (23%), Positives = 181/467 (38%), Gaps = 73/467 (15%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A A+ V+ + + H + PAS K + AA +LGPD TT ++ G Sbjct: 83 ALGQWAISVRDIDTGEQIVSLHPDTLFEPASVTKTYSTGAAWQELGPDSTVTTPVKRTGE 142 Query: 92 VENGVLKGDLVARFGAD----------------------------PTLKRQD----IRNM 119 V G L GDLV D TL +D + + Sbjct: 143 VTGGTLNGDLVLVGKGDITMGGRTKPDGTVDFTNLDHNDANGIPGATLTTEDPLTGLNEL 202 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 A +K SG+N++ G+V++D ++ HD P I+++N + Sbjct: 203 AAQVKASGINEVSGDVIVDDRLWQPHDL------------VGNPVTPIIINQNVIDFTTT 250 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + + + P + +QV+T+ G ++ D TLTG + S Sbjct: 251 ATTPGQPASIVMSPVVAPWQIDNQVQTVEAGGK----TQIKPTSTDEKTVTLTGTIAADS 306 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE--------PGTVVASKQ 291 P+ + +D A+YA + L +AG+T + + + T VA Sbjct: 307 APVVNVYLFKDPATYARTAFIEALGRAGVTVTADPVATNPDSALPPKADVDGLTSVAELT 366 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S PL + + + K S N + +F + A + G ++I Q AG+D Sbjct: 367 SLPLKEEITYINKISYNNGGEAMFCRLAVAAGS--DDCEQGLRKGQEIW-QAAGLDTNAV 423 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 ++ DGSGL N + P + +Q+ +A+ + ++ LP+ G DGSL + Sbjct: 424 VLVDGSGL-EGNYVTPNSQVQLQTIMAKRPDSQEWLDTLPILGVDGSLA--TVQSTSPSA 480 Query: 412 GKVSAKTGSLQG-----------VYNLAGFITTASGQRMAFVQYLSG 447 GKV KTG+L V L G + T G+ AF + + Sbjct: 481 GKVFGKTGTLAAGDAFNDRYRLPVKALGGQMDTEGGRHFAFAVFSTN 527 >UniRef50_Q16AV2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=9 Tax=Rhodobacteraceae RepID=Q16AV2_ROSDO Length = 499 Score = 283 bits (725), Expect = 8e-75, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 169/447 (37%), Gaps = 22/447 (4%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 V+ + + + ++A V + PAS K ITAL AL L Sbjct: 43 PVRPPGPEALVKKARLSGDVAFAVADAKTGEILEARAPELGIAPASVTKAITALYALDTL 102 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV- 135 G RF T + G V +GV++GDLV G DPT + + A LK++G+ ++ G+ Sbjct: 103 GAAHRFKTRVIATGGVTDGVVRGDLVLAGGCDPTTDTRAFAALAAQLKEAGIREVKGDFR 162 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVAS 194 + + + P P +S A ++ N A + R Sbjct: 163 VYEGPVATVRSIDPEQPD---HVGYSPAVAGIALNFNRVHFEWKRAGGKYTVTMDARAGR 219 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 Y P ++++ + R + Y E G N +G L V+ Y Sbjct: 220 YRPEVAVARMKVVQRRAPIYTYEE---ANGRDNWTVASGALGSGG---SRWLPVRRPGLY 273 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 AG + + GI + + G V+A +SAPL D+L+ MLK S+N+ A+ + Sbjct: 274 AGEVFATLARSHGIVL--PAAKLQKAAPQGAVLAEIESAPLSDVLRAMLKYSNNLTAEMI 331 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 AR + A + + + + + + D SGL + ++ M++ L Sbjct: 332 GMAATQARTGQVRSLAASAREMNAWAKDV--LKMQSPAFVDHSGLGGDSRVSAQDMVRGL 389 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 I + + L G L + AKTG+L V L G++TT Sbjct: 390 GAIGHAALLRPLLKSVKLLDSQGRLVNEHPVQAD-------AKTGTLNFVSGLGGYVTTP 442 Query: 435 SGQRMAFVQYLSGYAVEPADQRNRRIP 461 G+ + F + + A R +R Sbjct: 443 EGRELVFAIFAADEATRAGITRAQRER 469 >UniRef50_A9ESR7 Probable D-alanyl-D-alanine carboxypeptidase n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9ESR7_SORC5 Length = 524 Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats. Identities = 114/459 (24%), Positives = 199/459 (43%), Gaps = 16/459 (3%) Query: 21 ANVDEYITQLPA-GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A ++ +T + G + ++ V + A + + + PAS K+ TA AAL LGP Sbjct: 75 AQIETLVTDVRRLGGRVGVLALDVASGATLAAFDQRGLYNPASNAKLFTAAAALRLLGPS 134 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 +R+ T L G+ NG + +LV R DP+L+ +D+ M L+ SGV ++ + ID Sbjct: 135 YRYLTGLY--GDASNGTVA-ELVLRGSGDPSLRTRDLWEMARALRASGVRKVAA-IAIDQ 190 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 F + P + P AA + K G A + + Sbjct: 191 GYFDTRYVPPAFEQQPEEWAAFRAPVAAASLNANALLFTVRPSKAGQAASVAIDPPGFAV 250 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + V T RG+ E L+ G L+G +P+ + LA V D L Sbjct: 251 LQGTVTTARRGAPEKLGVRLEP-NGQRLVAHLSGHIPEGGRAVSLARRVDDPRLVVAYAL 309 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 K+ L + G+ SG + + ++ + +SAPL +LL + K SDN A+T+F+ + Sbjct: 310 KEMLLEVGVDVSGEVRLGGE--RQKRLLVAHRSAPLGELLSALGKDSDNFYAETIFKTLA 367 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + PGT ++ V + LR+ + ++ +GSGL +P ++++L+ Sbjct: 368 AEKRGRPGTAEGAAEVVGETLRELDAFG-QDVVLRNGSGLFDAARASPEAIVRLLRAALL 426 Query: 380 HDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ- 437 +F + L + G DG+L+ R + + AKTG+L V L+G+I G+ Sbjct: 427 DPALGADFTAQLAIGGVDGTLRSR--FRGWSKERAIRAKTGTLASVVALSGYILAPPGRP 484 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQN 476 +AF S P R + F L +++++ Sbjct: 485 PIAFAVLASDV---PGKIDPARKAIDHFVESLADELWKD 520 >UniRef50_B3QXB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chloroherpeton thalassium ATCC 35110 RepID=B3QXB7_CHLT3 Length = 455 Score = 281 bits (720), Expect = 3e-74, Method: Composition-based stats. Identities = 98/451 (21%), Positives = 170/451 (37%), Gaps = 60/451 (13%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 + +++Q + + + PAS K++T AAL +LGPDF+F T + G Sbjct: 53 LSATRFGILIQTAD-GETIYEQNPNGLIKPASNLKLVTTAAALEKLGPDFKFRTDIFIDG 111 Query: 91 NVENGVLKGDLVARFGADPTLKR-------QDIRNMVATLKKSGVNQIDGNVLIDTSIFA 143 + GVL G+L+ DP L + ++ V TL GV Q+ G V++D S + Sbjct: 112 YLSYGVLHGNLIISGSTDPLLSGFFDGQINEIVKQWVDTLYTLGVQQVRGEVILDNSYYV 171 Query: 144 SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQ 203 +D D + ++ + +A A+ + S+ Sbjct: 172 GNDVEI-----DDGEEYAPV-------------------QFSTVASFTRANTSQLNRVSR 207 Query: 204 VRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDEL 263 VR + S + G L + Y L E+ Sbjct: 208 VRVINTRSGTKKVVRRGFSRGS-----------------RLKRVRIEPNIYLTDALVGEM 250 Query: 264 KQAGITWSGTLLRQTQVNE----PGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 K I +S + + + + S SAPL ++L K SDN AD + R +G Sbjct: 251 KARNIIFSEGIEKINYSQKIDRTQWKHIYSHYSAPLSEILSRTNKTSDNFYADQLLRTLG 310 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-A 378 + G + V L G I DGSGLS N + P +++V++Y+ Sbjct: 311 GEYRG-EASIEKGIEVVNDFLLYNVGASRDEFHIVDGSGLSHDNQVTPNLLVEVMKYMKR 369 Query: 379 QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 + ++ L + DG+L R + + AKTGS+ G+ +L+G++ + SG Sbjct: 370 RSKYFSDYYESLSIPTVDGTLVSRI---HHELATNIRAKTGSISGITSLSGYLKSRSGMD 426 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + F + Y + + + L Sbjct: 427 IYFSIIGNSYRKRT--LKRVEDKICKILLDL 455 >UniRef50_Q1NHU7 Penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NHU7_9SPHN Length = 480 Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats. Identities = 109/482 (22%), Positives = 194/482 (40%), Gaps = 46/482 (9%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 A A +++ + Q P G L+V + AP + + +PAS K+ T A Sbjct: 22 APPPLLAGIEQQLEQGPEGTRYGLLVATLD-GAPVLAIAPDERFIPASNTKIFTTATAYA 80 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD------PTLKRQDIRNMVATLKKSGV 128 L R +G + +G+++ D P + + + Sbjct: 81 DLPALDR-----AAQGTGVR-IDQGNVILEGRGDARLSSAPDCTVDCLATLADAIAAR-- 132 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 + +V+ D S + PG WN++ + +A +D N + ++ A Sbjct: 133 TRRVRDVVGDDSWYPDERWGPGMSWNNIQSRYGTGISALTLDDNHLTATIAPGTIGAPPA 192 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 + T+ +++ T+P + + D P LTG + + P L F+V Sbjct: 193 V---QASGYYTIDNRIVTVP---GKGEAIVADRAPNGR-LVRLTGTIGADASPETLHFSV 245 Query: 249 QDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA-----------------SKQ 291 D A YA L+D L G+ +G + + + P A Sbjct: 246 DDPAHYAAWRLRDLLVARGVIVTGDIRTRHRSLSPADDPAIRGGAPAARPPAASLLAQLP 305 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 + PL D ++I+ K+S N+ AD + R + A+ + G+ G A+ L QAGV+ + Sbjct: 306 ALPLADDMRIINKQSQNLHADLMLRRVARAQGS--GSIADGQAAL-DRLMGQAGVNKASY 362 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 ADGSG+S +N ++P + +L +IA+ + LP+AG DG+L+ R ++ Sbjct: 363 SFADGSGMSSYNRVSPRAAVTLLAWIARQPWGAAWRDTLPIAGQDGTLRNR--FKGTVLE 420 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 GK+ AKTGSL L+G++ T SG+ + F + + R L Sbjct: 421 GKLFAKTGSLNASRALSGYLITRSGRTLVFSALANDMPDGTDA--QASAAVDRALVALAD 478 Query: 472 DI 473 + Sbjct: 479 AM 480 >UniRef50_A3JWS1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Rhodobacterales bacterium HTCC2150 RepID=A3JWS1_9RHOB Length = 499 Score = 278 bits (710), Expect = 4e-73, Method: Composition-based stats. Identities = 95/462 (20%), Positives = 173/462 (37%), Gaps = 29/462 (6%) Query: 23 VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRF 82 + + + + ++ +V + PAS K ITAL A LGP RF Sbjct: 51 LADIVAKTGLTGKVSCVVADARTGKVLEVLNPVLQLPPASVAKAITALYAWENLGPGHRF 110 Query: 83 TTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV-LIDTSI 141 +T + ++G NGV++GD++ G DPTL + +M A +KK GV + G + SI Sbjct: 111 STRVLSEGQTNNGVVQGDIMLVGGGDPTLDTDGLFDMAAKMKKGGVRGLSGKFKVYADSI 170 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVASYYPVTM 200 P ++ AA ++ N + R ++ P Sbjct: 171 PEIFQIDKDQP---KHVGYNPAIAALNLNFNRVYFEWKRNGSGHSVTMDARGRNHRPAVS 227 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTL-TGCLPQRSEPLPLAFAVQDGASYAGAIL 259 F+++ R Y + G +++T+ +G L + V+ Y + Sbjct: 228 FAKMTIKNRKLPTYTYKD----QGGRDQWTVASGALGKGGG---RWLPVRRPVVYTAEVF 280 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 + + GI G V+ + SA L +++ ML+ S N+ A+ V Sbjct: 281 RTFARSHGIDLPKPEYINGPAPIGG-VLVERPSADLRNIMTGMLRYSTNLTAEIVGLAAT 339 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 A G+ RA ++ + ++++ G + D SGL + I+ M+ VL+ Sbjct: 340 QASGGKAGSLRASANEMSAWMQRRLG--NKRAKLEDHSGLGDGSRISAHDMVNVLRSSGT 397 Query: 380 HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRM 439 +N + + ++ G A V AKTG+L V LAG+I G+ + Sbjct: 398 DGPLINIM-------KEYGIRDAKGRPLANQPADVVAKTGTLNFVSALAGYIRQKDGRIL 450 Query: 440 AFVQYLSGYAVEPADQRNRRIP------LVRFESRLYKDIYQ 475 F + + + R L ++ + Sbjct: 451 TFAIFTADMKARDRIAKGDEERPKGSRSWSRKSRALQNELVK 492 >UniRef50_B9ZBZ1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Natrialba magadii ATCC 43099 RepID=B9ZBZ1_NATMA Length = 508 Score = 277 bits (709), Expect = 5e-73, Method: Composition-based stats. Identities = 103/463 (22%), Positives = 188/463 (40%), Gaps = 25/463 (5%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 V A +V +++ Q A +++ + + D S++ PAST K++T AA Sbjct: 59 GPPVDAGDVFDHLDQ----AAISVFARDIETGDVIADSGSERPVQPASTAKLLTTAAAFD 114 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 +LGPD+R+ TT+ G+ N + L DP L D+ + A + +G+ ++ Sbjct: 115 ELGPDYRYETTVGVVGDRRNQRVVESLGVVASGDPDLTASDLEALAAAVADAGIERVTDR 174 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 +++D S F + P W D + + +A +V+ N +++ + Sbjct: 175 LVVDVSAFDDGEYPPAWTLGDAVNTYGSKSSAFVVNHNEAEITVSRQGDTCEFEHTVEPD 234 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 V + ++ + ++ + N + G + E + V + Sbjct: 235 SGLVDVEIELECV----DSDRFVTITTPNHWTNTAEVNGRMVPDDEA-TASVPVATPNEH 289 Query: 255 AGAILKDELKQAGITWS-------GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 A + L G+ + + E VA+ +SAPL D+ + + S Sbjct: 290 AARVFARALADEGVEITPGGGGPEPEIEITDVPIELTEEVATHESAPLSDIAEGVNHWSY 349 Query: 308 NMIADTVFRMIGHARFNV-PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIA 366 NM+A+ + R + + R G+W + + L I DGSGLSRH+L + Sbjct: 350 NMVAENIARTVAYEREGTGNGSWSVWEAYLDETLAAA---GAETPQIRDGSGLSRHDLAS 406 Query: 367 PATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 ++ ++++ D F + +AG DG+L+ R G VD + KTGSL+GV Sbjct: 407 ARDVVSMIEWGLDADWGEEFYGTMAVAGEDGTLRNRLGD----VDATIRGKTGSLRGVTC 462 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPAD-QRNRRIPLVRFESR 468 LAG I +F + E A+ R LV + Sbjct: 463 LAGVIEDDGEPATSFAVLAANLTGERANGASPRVDELVTAIAE 505 >UniRef50_C6XU53 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Pedobacter RepID=C6XU53_PEDHD Length = 468 Score = 277 bits (708), Expect = 8e-73, Method: Composition-based stats. Identities = 103/457 (22%), Positives = 173/457 (37%), Gaps = 41/457 (8%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 ++ A D A+ +L+V + AST K ITA A LG Sbjct: 26 LERAFNDFLANPQTRYASTSLLVLDANTGKTLFGRNENIGLATASTLKTITAATAFNILG 85 Query: 78 PDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD--------IRNMVATLKKSGV 128 DF+F TTL G + +G LKG+LV DPTL + V + +G+ Sbjct: 86 KDFQFQTTLGYTGQLTPDGTLKGNLVITGSGDPTLGSARYQNKEKAVLDQWVNAISAAGI 145 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 +I+G V+ D IF + GW W D+ + A + N F + L Sbjct: 146 KRIEGMVIGDDRIFGTQTTPEGWTWQDIGNYYGAGTSGLAWRENQFDIHLQPGQGINTAV 205 Query: 189 FI--RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 + V + + ++++T G+ + Y L P N L G ++ Sbjct: 206 KLLRTVPEMPYLKLVNELKTGASGTGDNAYAFL---PPYSNIGYLRGSWGMGIGKNGISA 262 Query: 247 AVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV-------ASKQSAPLHDLL 299 A+ D A L+D LK+ GI+ + + G + +S S PL +++ Sbjct: 263 ALPDPAFDCAYRLQDTLKRLGISTAKPATSTRMMALNGEELPGITKNLSSISSPPLSEIV 322 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 LKKS N+ +T+ + + + T G+ A + G+D I DGSGL Sbjct: 323 FWFLKKSINLYGETLLKTLALKSGKMAKTTE-GAKAEINFWADK-GIDRNALNIIDGSGL 380 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 S N + A M +L ++ P + K+G Sbjct: 381 SPANRVTAAAMGSILFMAQTASWFSDYYKAFP------------------EYNGMKIKSG 422 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 ++ V AG+ T +G + V ++ Y+ +++ Sbjct: 423 TINDVSAFAGYYTNGAGNKYIIVININNYSGSGINRK 459 >UniRef50_Q1QTD2 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Chromohalobacter salexigens DSM 3043 RepID=Q1QTD2_CHRSD Length = 492 Score = 274 bits (700), Expect = 6e-72, Method: Composition-based stats. Identities = 106/465 (22%), Positives = 181/465 (38%), Gaps = 16/465 (3%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVI 67 + + + S A T G + Q +G+ + PAS K+ Sbjct: 24 MLVLLGLPLSAVADGFSNLATLADKGFVIGAQAQLLGSGENLGSIQPTRRLSPASVTKLY 83 Query: 68 TALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQDIRNMVATLKKS 126 TA A+L + GP RFTT L G V+ GVL+GDLV G DP L +++ +V L++ Sbjct: 84 TAAASLDRWGPQHRFTTQLMATGEVDAQGVLQGDLVFDGGGDPALTSENLWRLVQRLRER 143 Query: 127 GVNQIDGNVLIDTSIFASHD---KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPK 183 GV +++G +++ F +SA ++A V+ + + Sbjct: 144 GVRKVNGELVVSQWRFGPVTCVTTDRCEARTRSDNAYSALLSSAAVNYGSWCNLIKPGAA 203 Query: 184 PGDMAFIRV-ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 GD A I + P+T T + + + + ++G + Sbjct: 204 VGDAATISDCTTVAPLTRIDNRVTTVAPGGDTRLSAERLSDAQGDTLRISGQIAHGGFSR 263 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 + A D A L L QAGI G T +A+ PL ++L M Sbjct: 264 EIYRASSDPAEQTAKTLVALLGQAGIEVDGHATSTTPPPTTAKRLAAVDGKPLQEVLLRM 323 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 L S+N +ADT+ + + R DA+ + R G + + GSGL+ Sbjct: 324 LNYSNNFMADTLALDLVAKPG---ASLRDAGDALMRFARDLPGHGV--PTLVSGSGLTPE 378 Query: 363 NLIAPATMMQVLQYIAQHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 N ++ + +L + + F++ L L +G + + + V KTG+L Sbjct: 379 NRVSAQDINALLSAMYRRSALFPTFVAGLQLP-TNGPMHFIRRGSET-FQQNVMLKTGTL 436 Query: 422 Q---GVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 V +AG+ T G+ +F ++G A P + +PLV Sbjct: 437 NEPVTVRAVAGYFRTRQGRWGSFAVLVNGTAQTPYLAWRQVLPLV 481 >UniRef50_A6G425 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G425_9DELT Length = 548 Score = 272 bits (695), Expect = 2e-71, Method: Composition-based stats. Identities = 108/454 (23%), Positives = 190/454 (41%), Gaps = 36/454 (7%) Query: 25 EYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTT 84 + ++ L A +A+ ++ + + A +++ PASTQK+ITA+AA+ LGPD++F T Sbjct: 109 DAVSGLGPKARVAVELRDLDSGARLASIGAERGLHPASTQKLITAIAAVELLGPDYQFET 168 Query: 85 TLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKK-----SGVNQIDGNVLIDT 139 +L +G+ LV R DP L D+ + + +GV ++ ++D Sbjct: 169 SLSREGDA--------LVLRGQGDPDLHLADLHALASAAMDDPESLAGVTRV----VVDD 216 Query: 140 SIFASHDKAPGW---PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 S F+ H PG+ D + AP A +D V++ G Sbjct: 217 SAFSHHRLGPGFGSARPGDFGHSYMAPSGALAMDYATVEVTVRPGRFNGPARVALSLPDA 276 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 V + + RT G + R + G +P P + V D AG Sbjct: 277 AVELVNHART---GFGGELEVRTEPGSQGRTRVIVEGWIPAGHAPASVRRRVSDPGLAAG 333 Query: 257 AILKDELKQAGITWSGTLL----RQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 A D L + + L R +A +SAPL ++L L+ S+N A+ Sbjct: 334 AAFADVLARVAGEGAEPLPVVRGRLGATAARSKELAVHRSAPLTEVLSSALRFSNNFTAE 393 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD-IGNTIIADGSGLSRHNLIAPATMM 371 V R + + PG+W G + + + + + +GSGL+R ++PA ++ Sbjct: 394 QVLRTLAWRATDTPGSWDDGVAVLERFAAALTDDERLADQHFVNGSGLNRDGRLSPAFLV 453 Query: 372 QVLQYIAQ-HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 L + ++ AG +G+L+ R G G++ AKTG+ +LAG Sbjct: 454 DALALTQRPGSPAQALLASFAEAGSEGTLRGRL----PGAGGRLIAKTGTYGSTSSLAGI 509 Query: 431 ITTASG-QRMAFVQYLSGYAVEPADQRNRRIPLV 463 + G + +AF ++G +VE + R + +V Sbjct: 510 VYDEPGQRPVAFAILVNGESVERS--RAAQDAVV 541 >UniRef50_A4EI99 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Roseobacter sp. CCS2 RepID=A4EI99_9RHOB Length = 490 Score = 271 bits (694), Expect = 3e-71, Method: Composition-based stats. Identities = 107/471 (22%), Positives = 190/471 (40%), Gaps = 26/471 (5%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 IA + VD + + ++V + D S + PAS K TAL A Sbjct: 33 PIARTPAKDAVDSMVAGRGFSGDFGVLVADLQTGEVLEDIQSAKAQPPASVTKAFTALYA 92 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 + LG F T + G +ENG+L G+L+ G DP L I ++ LK +G+ ++ Sbjct: 93 IEALGAGHTFATRIFADGIIENGILSGNLILAGGGDPNLVTDQIADLAQRLKDTGLREVK 152 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY-SAPKPGDMAFIR 191 G+ L+ + + ++ ++ + ++ ++ N R Sbjct: 153 GDFLVWDNALINQEEIDESQFDYL--GYNPTITGLNLNYNRVHFEWKLDGEDYVTTLDAR 210 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 +Y P +++ + R S Y ++ GD++++T+ G ++ V+ Sbjct: 211 SENYRPAVTTARISVVDRSSPVFTYSDI----GDVDQWTVAG--SALNKEGSRWLPVRHP 264 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 A YAG + + GI ++T V G +AS +SAPL +++ ML+ S N+ A Sbjct: 265 ALYAGEVFATFARSHGILLKAP--KETAVAPTGMTLASLESAPLRQMMRGMLRFSTNLTA 322 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + AR P R + + + +AG D SGL + ++PA M+ Sbjct: 323 EAAGMAATAARAGTPRGLRTSALGMARWANARAG--SITPSFVDHSGLGDQSRVSPADMV 380 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFI 431 ++L + + L G D + V AKTG+L V +LAG+I Sbjct: 381 RLLGAPDVIQTLRPIMRDIRLVGDD-------QQVISDPAVSVKAKTGTLNFVSSLAGYI 433 Query: 432 TTASGQRMAFVQYLSGYAVE------PADQRNRRIPLVRFESRLYKDIYQN 476 T SG+ +AF + S A+ R R+ +DI ++ Sbjct: 434 RTKSGRDLAFAFFASDLEAREAGKLTGAESPPGARGWNRRARRVQQDILKH 484 >UniRef50_D2R7A5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Pirellula staleyi DSM 6068 RepID=D2R7A5_9PLAN Length = 524 Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats. Identities = 113/519 (21%), Positives = 198/519 (38%), Gaps = 77/519 (14%) Query: 1 MRFSRFIIGLTSCIAFSVQAAN-------VDEYITQLP-AGANLALMVQKVGASAPAIDY 52 + +I + QAA V Q A A+ ++ + + ++ Sbjct: 8 LLVVAVVICSPLVVGPMNQAAAEDSLAMAVQALADQPLYAQAHWGILAVDLESGEVVLER 67 Query: 53 HSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTL 111 S ++ PAS K+ + +AL LG +R T L +G + +G L GDL+ R D L Sbjct: 68 DSGKLFAPASVTKLFSCASALDYLGASYRSRTPLLMRGTLASDGTLTGDLILRASGDFHL 127 Query: 112 KRQ--------------------------------DIRNMVATLKKSGVNQIDGNVLIDT 139 + I + + G+ ++ G VL+D Sbjct: 128 GNRLREDGTIDFTSSDHTYSNWASDSRLTPQDPLTGIIQLAKAARAFGIRKVTGEVLVDD 187 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 ++F + P A V+ N +++ A + Sbjct: 188 TLFDHTTSSGSGP---------AQVTPIFVNDNVLDLTITPAAAGEMATIEARPATALFK 238 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + S+V T S + V + G +P PL V A YA A+L Sbjct: 239 ITSEVTTGASDSKA----SVQVSCDPRGNVVVKGTIPAGRAPLLRHVEVPSPAGYARALL 294 Query: 260 KDELKQAGITWSGTL--------LRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 + L + GI + L + V S PL + +K++LK S N+ A Sbjct: 295 IEALAREGIELVAKISLDHPQAKLPTADDYQKLAAVGEVVSPPLSESVKLILKVSHNLHA 354 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 ++ ++ ++ T G + L+ +AGVD+G G+G S + + P + Sbjct: 355 SSLPLVVAASQGKR--TAAEGMKLEGEFLK-RAGVDVGTISFGGGAGGSSADFVTPRATV 411 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS------LQGVY 425 Q+LQY+ + D+ +I+ LP+ G DG+L A ++ GKV KTG+ L G Sbjct: 412 QLLQYMVKRDDAKEYIAGLPILGVDGTLA-TAIDPESPARGKVQGKTGTLVWDNLLNGDS 470 Query: 426 -----NLAGFITTASGQRMAFVQYLSGYAVEPADQRNRR 459 LAG++TT G+R+AF +++G + + + Sbjct: 471 LLTSKGLAGYMTTTKGRRLAFALFVNGVHLRDGVEAKQI 509 >UniRef50_B9KKY6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Rhodobacteraceae RepID=B9KKY6_RHOSK Length = 507 Score = 270 bits (691), Expect = 7e-71, Method: Composition-based stats. Identities = 102/441 (23%), Positives = 165/441 (37%), Gaps = 25/441 (5%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 + + + G +A +V + ++ PAST K +TAL L LGPDFR Sbjct: 64 EAGDLVARAALGGAVAYVVADARSGTVLEAANAALRLPPASTAKTVTALYGLETLGPDFR 123 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSI 141 FTT L G V NG+L+GDL+ DPTL + M A L+ GV I G L D S Sbjct: 124 FTTRLLATGPVTNGILQGDLILSGSGDPTLSTDALGEMAARLRARGVTGITGRYLADASA 183 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVASYYPVTM 200 + + ++ + ++ N A K + R + P Sbjct: 184 LPAVPLIDPEQPD--HVGYNPALSGLNLNFNRVHFEWKQAAKGWSVTMDARAERFVPPVS 241 Query: 201 FSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILK 260 ++++ + R Y G + +G L V+ +Y + + Sbjct: 242 MARMKVVTRDLPIYTY---AGDQGSDSWTVASGALGAAG---SRWLPVRHPEAYTAEVFQ 295 Query: 261 DELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGH 320 + GI + + + G + QS PL ++L+ MLK S N+ A+ +G Sbjct: 296 TLARAQGIELPAAQVVRVRP--EGAALVEWQSDPLREILRDMLKFSTNITAEA----VGL 349 Query: 321 ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH 380 A P + + A+ ++ G+ D SGL +L++ A M+ L + Sbjct: 350 AASGAP-SLAQSAAAMSAWANRRFGISTA---FHDHSGLGGGSLVSAADMVTALLAAERE 405 Query: 381 DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 L PL + G + V+AKTG+L V L G T G+ + Sbjct: 406 GLGLR-----PLMKRT-EIGGGKGTKKGARRIAVAAKTGTLNFVSGLVGIATAEDGRDLV 459 Query: 441 FVQYLSGYAVEPADQRNRRIP 461 F Y + A R Sbjct: 460 FAIYCADRDRRSALPMEARER 480 >UniRef50_UPI0001C312D4 Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C312D4 Length = 535 Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats. Identities = 101/504 (20%), Positives = 177/504 (35%), Gaps = 82/504 (16%) Query: 11 TSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 S + A V + I ++ A A+ + ++Q+M P ST K Sbjct: 34 PSASGKATGADKVAKIIARIEAKPRYRHADWGFQILDQRTGDVLGAQNAQKMFDPGSTMK 93 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK------------- 112 + + AL + G ++RF T + +G V G L G LV D TL Sbjct: 94 LYSVSTALSRYGTNYRFRTPVYRQGTVSGGTLGGSLVLVGSGDLTLGLRAEPGGRLAYAN 153 Query: 113 ----------------------RQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + + ++ SG+ ++ G+V++D +FA + G Sbjct: 154 LPAVDHSYADQLPGAVLPKGDPMAGLDELARDVRASGITRVSGDVVVDDRLFAPY---DG 210 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 +P + V+ N + + + + T+ ++V T+ G Sbjct: 211 FPDG--------LISPIWVNENLVDLLVKPGAVGQPASIDQRPLTASYTVDNRVVTVRAG 262 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 L+V +TG + S P + V D A++A L++AG+T Sbjct: 263 KPTT----LNVSEPTPGTIEVTGQIAAGSGPTLKVWEVDDPAAFARTAFIAALQRAGVTV 318 Query: 271 SGTLLRQTQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHAR 322 + T + V S+ L K++LK S N AD + + R Sbjct: 319 TATATGPNPATLLPPKGSYQAADRVGEHVSSTLSQYAKLILKVSHNRGADLMTCLAAVRR 378 Query: 323 FNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDN 382 + G + Q GV I DG+G PA + +L+++ + Sbjct: 379 GST--DCEDGLTSEVQT-ASGLGVPYAGVIPMDGAGSDDQGRTTPAALATLLRHVVRAPY 435 Query: 383 ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV------------YNLAGF 430 F+ LP+ G DG+L ++ G+ KTG V +LAG+ Sbjct: 436 GRAFVDALPILGRDGTLAN--VESRSPAAGRSQMKTG--NRVVSNAAGQIIVLGNSLAGY 491 Query: 431 ITTASGQRMAFVQYLSGYAVEPAD 454 T SG+R+ F+ + A Sbjct: 492 AETKSGRRVVFMIAVGNVPTRTAA 515 >UniRef50_C2MCM7 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Porphyromonas uenonis 60-3 RepID=C2MCM7_9PORP Length = 500 Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats. Identities = 95/458 (20%), Positives = 173/458 (37%), Gaps = 31/458 (6%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + A + V ++ + PA+ YH+ + PAS K+ ++ ALI LG D++F T + Sbjct: 39 AEQRGEARYGVSVWRIDQTKPALSYHASERFTPASVTKIFSSATALIVLGADYQFPTEIG 98 Query: 88 TKGNV-ENGVLKGDLVARFGADPTLKRQD--------IRNMVATLKKSGVNQIDGNVLID 138 +G + GVL GDL+ DP+L+ + + L+K+G+ QI G +++D Sbjct: 99 YRGTITSEGVLDGDLIIVGHGDPSLESKHYPRRKGIFYDQVYLALQKAGIRQIRGRIVVD 158 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY-- 196 S + W D + ++ + N V + + D+A Y Sbjct: 159 ASAYCDEGYLEAWSRGDWGKRYAPALYGVNLCDNIMQVGISAQ----DVARGASEPSYLH 214 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF-AVQDGASYA 255 P T + + + L+G L + S + + + A Sbjct: 215 PATPGHAWQIDIQLVKRGNLLAISADRESRTTRRLSGRLARGSSKRQVIACDLSNPAMAL 274 Query: 256 GAILKDELKQAGITWS---GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 L + L+Q GI S T++ S L +L++ S N+ A+ Sbjct: 275 ALQLAEHLQQRGIELSECRSVAYYDRSAPVLTTLLDIYLSPHLSELIRTCNFHSVNLYAE 334 Query: 313 TVFRMIGHARF----NVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPA 368 + R IG+ + R+ + + DGSGLS + ++P Sbjct: 335 ALLRSIGNHFGSVQQGECFSTHQALKREMNYWRETCALPADQLELYDGSGLSPRSKLSPY 394 Query: 369 TMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYN 426 + L+ + Q FI LP G G++ R+ + + K+GS+QGV N Sbjct: 395 ALTAALRQVYQLPLPTSDPFILSLPQVGRQGTV--RSLMPAS--RITAYFKSGSIQGVQN 450 Query: 427 LAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 AG+++ G + P R+ ++ Sbjct: 451 YAGYVSYK-GHTYCVSLLANNMRHRPT-TRSTMRRVLE 486 >UniRef50_C7DAS9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Rhodobacteraceae RepID=C7DAS9_9RHOB Length = 504 Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats. Identities = 92/445 (20%), Positives = 157/445 (35%), Gaps = 22/445 (4%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 + + +A M+ Q PAS K +TAL AL QL Sbjct: 50 PATHIAPEVMLLDAALSGTVAFMLADAETGEVLEANAEQIAQPPASVAKAVTALYALDQL 109 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 G + RF T + G +GV GDLV DPTL + ++ LK G+ ++ G Sbjct: 110 GAEHRFETQVIATGGFADGVCLGDLVLVGSGDPTLDTDAMESVARDLKAVGLREVRGEFQ 169 Query: 137 IDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI-RVASY 195 I + + +S + ++ N A + R + Sbjct: 170 IYEDALPYVATIDAQQPDYL--GYSPSVSGLNLNFNRVHFEWRRAGADYSVTMDARSEKH 227 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 P +++R R + Y + + G R V+ YA Sbjct: 228 RPDVAMARMRVERRETPVYAYSDGGHFDQWSVARSALGNAGAR------WLPVRKPGLYA 281 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 +L+ + GI + + + G V+A S + + ++ MLK S N+ A+ Sbjct: 282 ADVLRTFARAQGIALGTASVTRARP--EGAVLARFLSGTMTEQMRGMLKFSTNLTAEAAG 339 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 R A + + + + + G+D D SGL + I+ M+ L Sbjct: 340 L-AASQRTGAIDGLSASASLMNRWCKAELGIDAT---FVDHSGLGDQSRISAEQMVAALV 395 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 + + N + D + + R + V V+AKTG+L V LAG+I Sbjct: 396 RVGPNGNLRPILKD-----IDMTDEDRKRIGDHPVQ--VAAKTGTLNFVSALAGYIRAVD 448 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRI 460 G+ +AF + + A R+ R Sbjct: 449 GRMLAFAFFAADVERRAAISRSDRE 473 >UniRef50_C8PWB7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PWB7_9GAMM Length = 604 Score = 267 bits (682), Expect = 7e-70, Method: Composition-based stats. Identities = 96/535 (17%), Positives = 181/535 (33%), Gaps = 91/535 (17%) Query: 23 VDEYITQLPAGAN-----LALMVQKVGAS----------APAIDYHSQQMALPASTQKVI 67 + E I A AN L+++VQ + + P Y++ PASTQK+I Sbjct: 69 LPETIQAKLAQANIPTDSLSMVVQPLTDNAQNVASTAPQKPLFSYNADVPRTPASTQKLI 128 Query: 68 TALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSG 127 +L LG DF + T L G V G L GD++ + DP L+ + + ++A +K G Sbjct: 129 PTYVSLDSLGKDFVWQTKLYQHGFVWKGTLYGDVIVQGSGDPKLENERLYQLLAMIKAQG 188 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG-- 185 + Q+ GN++ID F D + ++A P A + + V L KP Sbjct: 189 IKQVQGNLIIDNQQFQGVDFDVNAFDGKGLRPYNAQPNALLTNFGTVEVDLVPIAKPNAI 248 Query: 186 ------------------------------------------DMAFIRVASYYPVTMFSQ 203 D+A +V + F+ Sbjct: 249 AAIKPAKASASGSSATTSNTSDLYNEAANLEQIQSKPSINPKDVAAYQVILKPALANFTM 308 Query: 204 VRTLPRGS-AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDE 262 TL + + + DG + + Sbjct: 309 PTTLKASQAPCNSSQDDWIGTLTSTGLSFHQTASAFCGEQKRYLTFPDGDVLVKQQIIAD 368 Query: 263 LKQAGITWSGTLLRQTQV---------------------------NEPGTVVASKQSAPL 295 ++ ++G + +V S PL Sbjct: 369 WQKILPNFTGNIEFANPAVPYMQQAKAIPQALPWYIRLYLKYFGKPLTPKLVGYVASNPL 428 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGH-ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIA 354 H+ +K + + S+N++ + + + A T+ + Q +Q+ ++ Sbjct: 429 HEQIKDINQHSNNVMTEQIALSLPLYADKQRISTYPKTFAYIHQWWQQKLP-QAQPPVMT 487 Query: 355 DGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQY-RAGLHQAGVDGK 413 SGL R +AP +M+ +L N + L +AG G+++ + G Sbjct: 488 RASGLCRDCRVAPNSMLALLTLAYHSPNFTVYRDSLGVAGESGTIKALKLRQPNNPAIGH 547 Query: 414 VSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS-GYAVEPADQRNRRIPLVRFES 467 KTG+L V ++AG++ SG+ A V ++ ++ + ++ + + Sbjct: 548 AWIKTGTLDNVTSMAGYVQGKSGKWYAVVGMINADNVKNNSNAKAVLDEMLAWTA 602 >UniRef50_Q2RY58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RY58_RHORT Length = 528 Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats. Identities = 99/442 (22%), Positives = 174/442 (39%), Gaps = 30/442 (6%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A + V+ + +++Q+ LPAS KV T +AAL LGP +R+ T L + G+ Sbjct: 59 APHQIGFAVRDLQTGRWLSAHNAQEPFLPASVSKVPTTVAALELLGPSYRWETRLVSTGS 118 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 V +GVLKGDL G DP L + + +V +L +G+ +DG L D ++ AS + Sbjct: 119 VVDGVLKGDLYLVGGGDPVLDGRRLSALVDSLGTAGIRAVDGRFLYDDTLIASAPEIEPS 178 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 D+ ++ A +D N ++ P V V P S Sbjct: 179 QPADL--AYNPGFGALALDFNRVMLTWDPKGGPRMGEVFDVPPVDSVRFRVSGPQDPPWS 236 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLP----------------LAFAVQDGASYA 255 +A + P + G P P V+ ++ Sbjct: 237 TKAGALRYEDTPPPVVT---AGLAPMAHPPQTPGESWVLAPTWKGSGSTWLPVKHPGAHV 293 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 + + ++ G+T + V+ +S PL ++ LK S+N++A+ + Sbjct: 294 AQVARALAQRDGVTL--PPPQPGAAPPRARVIGLSESPPLFEVATAALKHSNNLVAEMIG 351 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQA-GVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 ++ + + R G+D +A+ SGL+ + + P M +L Sbjct: 352 MTATRRITGRALAPTESAETLAALFRATLPGLDWSTFRLANHSGLTMDSRMTPEQMTAIL 411 Query: 375 QYIAQHD-NELNFISMLPLAGYDGSLQYRAGLHQAGVDGK--VSAKTGSLQGVYNLAGFI 431 Y H + L++ +LP L+ + L + DG+ V AKTG++ LAG+I Sbjct: 412 DYAQLHAFSGLDYAGLLPT--RRWGLEDDSDLPETR-DGRLPVWAKTGTVYYGRGLAGYI 468 Query: 432 TTASGQRMAFVQYLSGYAVEPA 453 SG +AF + + Sbjct: 469 VPRSGHLLAFSFFANDLDKRRT 490 >UniRef50_Q86I79 Penicillin-sensitive carboxypeptidase A n=1 Tax=Dictyostelium discoideum RepID=PSCA_DICDI Length = 522 Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats. Identities = 90/452 (19%), Positives = 161/452 (35%), Gaps = 41/452 (9%) Query: 33 GANLALM--VQKVGASAP--AIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLET 88 G ++ + + Q PAS K+ T ++ G DF+ T T Sbjct: 61 GTQWGVVADIYTPSNGEFTNIFSLNELQAFTPASNTKLFTTISIFYTFGEDFKVFTPFFT 120 Query: 89 KGN-----VENGVLKGDLV-ARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF 142 + + D + + DP++ ++ + + +L+DTS + Sbjct: 121 DKPFNSVSGGSSNSELDFICVKGMGDPSMSIDNLIEAAKFFSSNPTMKKVNKLLLDTSFY 180 Query: 143 A-----SHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR-----V 192 + W W D+T + + P I++ N + + + G Sbjct: 181 NIGNGVDGNIPSAWEWEDLTSTYGSIPTPLIINENTMDIYITPSNVIGGKPTASFKYSGE 240 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 Y PV + + T S + +TG + + D Sbjct: 241 DKYLPVIILATTTTTSNSSTSTLNYSFKMSSQS---IYITGNCDINGGIQIITVPILDPE 297 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 Y + L+ G+ S T + S L ++L L S+N+ A+ Sbjct: 298 QYFLTVFSALLEDGGVEISQTAIGSCNYTGMDYKSFEVISPELSEMLNYTLLTSNNLYAE 357 Query: 313 TVFRMIGH---ARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPAT 369 T R +G A T++AG + ++Q L + DGSGLSR+N I P + Sbjct: 358 TFLRQMGTFNSAASESTPTYQAGLEYIQQTLS----IPTSLYTQVDGSGLSRNNFITPKS 413 Query: 370 MMQVLQYIAQH--DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNL 427 ++ V++ + + D + ++IS LP+A G+L R G V AKTGS+ GV +L Sbjct: 414 LITVIENVYTNVGDPQHDYISYLPVASLSGTLSKR--FINTPASGIVHAKTGSMTGVNSL 471 Query: 428 AGFITTASG------QRMAFVQYLSGYAVEPA 453 G I +G + F + + Sbjct: 472 TGVIL-PNGLSDDQQNSIFFSIIANNSPAQNT 502 >UniRef50_Q5ZVH0 Serine-type D-Ala-D-Ala carboxypeptidase n=4 Tax=Legionella RepID=Q5ZVH0_LEGPH Length = 553 Score = 261 bits (667), Expect = 4e-68, Method: Composition-based stats. Identities = 90/485 (18%), Positives = 173/485 (35%), Gaps = 78/485 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A L V + ++ +S S +K+ + L + G D++ T + G Sbjct: 61 KKALWGLRVVDLDTGNVLLNLNSSTQFYIGSVRKIFSVGELLNERGADYQSVTRVHYDGV 120 Query: 92 VENGVLKGDLVARFGADPTLKRQDIRN--------------------------------M 119 V NG L G+LV D T+ + + + + Sbjct: 121 VHNGNLNGNLVLVASGDLTMGGRTLPDGHVAITEYDHNEANSLGNAIITQTNLLAGYQYL 180 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 + K+G+ I G+++ID +F + + ++ + + + Sbjct: 181 AKQVYKAGIRSISGDIVIDDRLFEPFNFRGEFD-----------VTPIFINDDVVDIVIL 229 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVP---GDLNRFTLTGCLP 236 + + + T+ +Q+ T+ E + + G LP Sbjct: 230 PSLINENANVSWLPHSSAFTVINQLLTVNPHEKYNLELESKLPACIGKPGCSGIIKGHLP 289 Query: 237 -------QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG---------TLLRQTQV 280 + PL F + ++YA I + L++AGI S LL+ T + Sbjct: 290 INFIPPLTHNYPLVQTFRITKPSNYARTIFIEALQEAGINVSSIDKTKENPKKLLKSTNL 349 Query: 281 NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQIL 340 +A+ +S PL + +K +LK S N+ ADT + G + + + ++IL Sbjct: 350 YNKNNKIAALKSLPLGEHVKYILKVSYNIGADTSLVLYGLTKGAR--SMIESLNVEKKIL 407 Query: 341 RQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQ 400 ++ G+ DGSG +++ L +++ F + LP+ DGSL Sbjct: 408 DKKYGISPSEYHFIDGSGGG-ETKATNTAIIKWLTIMSKRPVFNIFYNSLPILAVDGSLG 466 Query: 401 YRAGLHQAG----VDGKVSAKTGS---------LQGVYNLAGFITTASGQRMAFVQYLSG 447 G+V AKTG+ L +LAG+I + R+AF ++ Sbjct: 467 SINNFQSDPSLSGATGRVHAKTGTYVLGNESGMLVKGRSLAGYIISKKNHRLAFALVVNN 526 Query: 448 YAVEP 452 ++ Sbjct: 527 IPIQS 531 >UniRef50_C6VWF5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Dyadobacter fermentans DSM 18053 RepID=C6VWF5_DYAFD Length = 424 Score = 260 bits (664), Expect = 8e-68, Method: Composition-based stats. Identities = 101/472 (21%), Positives = 166/472 (35%), Gaps = 53/472 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + F II L+ C A + + + + + + + +V Y + +P Sbjct: 4 LLFIISIIVLSGCSASHFLKREITR--SAVLSQQHTGISITRVNEQKAMAAYQDNKYFVP 61 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI--RN 118 AS K+ + A L LG ++ +E G L L+ R DP+L D+ Sbjct: 62 ASNTKLFSFYAGLSALGD------SIPGLEYLEWGEL---LIIRGTGDPSLLHPDLPSSK 112 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 ++ LK + F + PGW W+D + A V N Sbjct: 113 VLDFLKSR-----KEPIFFTPYHFENKRFGPGWAWSDYNDYYQPEVTAMPVYGNIVRFQS 167 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 + K R ++ + T+ G + + P +T +P Sbjct: 168 QNGGK------YRAHPHFWQKSMVEDTTVS-GIERDELQNIFHYPKTAGTQWITKDIPVH 220 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 +L D LK+ I L + + S L Sbjct: 221 -----------MTDQLTLQLLSDTLKKE-IKLINIPLE--------IELQTVNSIASDSL 260 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 M++ SDNM+A+ + + A T +A + AV L + DGSG Sbjct: 261 YTRMMQASDNMLAEQLMLLYATANKLPLSTEKAIAHAVEHHLADL----PDKPVWKDGSG 316 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKT 418 LSR+NL P TM+ +LQ I + +LP G G+L+ + AKT Sbjct: 317 LSRYNLFTPRTMVALLQKIYAKVPQERLFRILPAGGKTGTLKNLFKEEPP----FIFAKT 372 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 GSL VYNL+G++ T G+ + F + + AD R ++ Y Sbjct: 373 GSLSNVYNLSGYLITRKGKVLVFSFMNNNFTKPTADVRKEVERILTAVHNKY 424 >UniRef50_D0XKK1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Brevundimonas subvibrioides ATCC 15264 RepID=D0XKK1_9CAUL Length = 506 Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats. Identities = 107/494 (21%), Positives = 174/494 (35%), Gaps = 50/494 (10%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQ------------LPAGANLALMVQKVGASAPAIDY 52 I L++ S+ A + AG +M + +D Sbjct: 15 ILICALSAGGCASLGATSASSAAGDSHRTLAAILDEPGLAGTRWGMMAMTLD-GQVLVDI 73 Query: 53 HSQQMALPASTQKVITALAALIQL----GPDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 + PAS K+ T AA L PD T++ + E D V D Sbjct: 74 RADDRFSPASNTKIFTTAAAFALLQDPGDPDPMDGTSVRLEARGEGRAP--DAVLMGAGD 131 Query: 109 PTLKRQ----DIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPP 164 P L + G+V+ D ++ + PGW W DM + F Sbjct: 132 PALGDGPDCVADCLAALADATAARTTRVGDVVGDDRLYPDERRGPGWAWEDMQEGFGTAV 191 Query: 165 AAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV-TMFSQVRTLPRGSAEAQYCELDVVP 223 +A V+ N + + G + + + + T+ G + + Sbjct: 192 SALTVNDNIVVLQVSPVQTAGAPVQAAWRAGDDLLPLVNTAVTVAVGETDLRVERR---- 247 Query: 224 GDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV--- 280 + L G +P S+ + L + D A A + L+ G+T GT+ + + Sbjct: 248 PGEDVVRLYGQMPTGSDAVALRVGLDDPALTAALRFRRLLEARGVTVEGTVRARHRPLEL 307 Query: 281 --------------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 G VA PL L + S N+ A+ + R + Sbjct: 308 SDDPTRGDSLPPVDQPDGVEVARLARPPLLASLNRTARFSQNLHAEL--LLRRLGRLDGT 365 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNF 386 G G V ++ AG++ + DGSGLS +N I+P L + ++ + Sbjct: 366 GARAEGLAQVEAVMA-TAGLERAAFDLYDGSGLSAYNRISPRATTTFLVWTSRQPWGEAW 424 Query: 387 ISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLS 446 + LP+AG G+L R ++G+V AKTGSL GV LAGF+T ASG+ +AF Y + Sbjct: 425 RATLPVAGQAGTLLRR--FAGTPLEGRVFAKTGSLNGVNALAGFLTAASGRTVAFSIYAN 482 Query: 447 GYAVEPADQRNRRI 460 Sbjct: 483 DRPSTADPALEAMD 496 >UniRef50_C5CGJ9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Kosmotoga olearia TBF 19.5.1 RepID=C5CGJ9_KOSOT Length = 380 Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats. Identities = 92/476 (19%), Positives = 188/476 (39%), Gaps = 97/476 (20%) Query: 3 FSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPAS 62 + I + + S+ V E + + + V+ + Y++ ++ PAS Sbjct: 1 MKKVIFLIFILLTTSIFGDTVRELVDNFD--GFVGIYVEDIETGEIITQYNATKLFTPAS 58 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT 122 K+ T LAAL LG ++ + T G D + DPT+ + +++A Sbjct: 59 VTKLFTLLAALENLGLEYTYKTKFYLIGE--------DFGVKGSGDPTIYVSTLHDIIAK 110 Query: 123 -LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 ++ + +I+ N+++D +F D + + ++ Sbjct: 111 IVEDKKIVEIN-NIILDDRLF------------DRKEIYG-------------RGWMWDD 144 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 P P A YP + ++++TLT Sbjct: 145 PNPMIGALTIKGPSYP-----------------------SISSGIDQYTLTRK------- 174 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKI 301 LK ++ G++ G ++ + +++ +S PL ++LK Sbjct: 175 -------------FFETLKSTFEELGVSVKGEMVVK-YISKKHEPAYIHESKPLREILKS 220 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 M++ SDN +A+ +FR +G GT A+ + ++ + + I DG GLSR Sbjct: 221 MIEVSDNQVAEQIFRTVGAKVLKK-GTINNSIAALIRTVKSVTEYGVNDFTITDGPGLSR 279 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 +NL++P ++++L+++ + + +L + DG+++ R V KTG+L Sbjct: 280 YNLVSPKLVVEILKHMYK-KYGDTLLDILSYSKNDGTIKGRFDFE-------VWGKTGTL 331 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDIYQNN 477 GV LAGF+ T SG+ + F + + ++ D + FE+ + + Y+ N Sbjct: 332 TGVSGLAGFMKTKSGKMVVFSLFENNFSKSKTDAKG-------FENSILEIFYEGN 380 >UniRef50_D2VFU5 Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VFU5_NAEGR Length = 453 Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats. Identities = 100/451 (22%), Positives = 168/451 (37%), Gaps = 47/451 (10%) Query: 49 AIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGAD 108 Y+ PAS K++T +AAL LG FRF+T +V R D Sbjct: 8 LFSYNPDPFLQPASNNKLLTTIAALNHLGSKFRFSTDFFYDYKNRR------VVVRPKGD 61 Query: 109 PTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIF---------ASHDKAPGWPWNDMTQC 159 PTL + ++ + + + + +++D S F + W W ++ Sbjct: 62 PTLTFEQLQKSLMNVLEKVTSMNPHEIVVDASFFNPIPFTNGGDDEEFPDSWEWGNLQYS 121 Query: 160 FSAPPAAAIVDRNCFSVSLYSAPKPGDM-AFIRVASYYPVTMF------SQVRTLPRGSA 212 FS+ P+A ++ N + ++ G + + + S RTL +A Sbjct: 122 FSSVPSALSLEHNTLTFTVKGGEVAGQGLSIVLDEPFQSFAKDFFEFDTSLSRTLDCSNA 181 Query: 213 EAQYCELDVVPGDL--NRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITW 270 E N+ + G L + E + + A+ G Sbjct: 182 NIISKESVTSYYKPLDNKIIVRGQLCAKKESKQTLTVLDTYGFFLQAVSSASASSNG--- 238 Query: 271 SGTLLRQTQVNEPGTVVAS-----KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 ++ E + + S + ++ L++SDNM A+ R +G Sbjct: 239 PKSVKIDYLSEEERSSMFEFKEECVYSDNILTVMNTTLQESDNMYAELFLRQLGTFIKAN 298 Query: 326 ------PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 P G V+ IL Q + DGSGLSRHNLI+P +++ L I Sbjct: 299 SSLDVFPSITTRGIQVVKDILTSQFNLSPFTFFQNDGSGLSRHNLISPRSLVDALSAIYY 358 Query: 380 HDN----ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 F+S+LPL G G+L+ R G VSAKTGSL GV +L+G+I A+ Sbjct: 359 KGAGGVSGETFVSLLPLGGRSGTLRNRFVD----FPGIVSAKTGSLDGVSSLSGYIRNAN 414 Query: 436 GQ-RMAFVQYLSGYAVEPADQRNRRIPLVRF 465 + + F ++ + + +V Sbjct: 415 YRDPIVFSIIVNQCPLSAKEMHQIIDSIVTL 445 >UniRef50_D1UR62 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Burkholderia sp. CCGE1001 RepID=D1UR62_9BURK Length = 550 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 106/519 (20%), Positives = 175/519 (33%), Gaps = 87/519 (16%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLPA-----GANLALMVQKVGASAPAIDYHSQQMALPA 61 + L SC V I Q+ A+ ++ V + + D +S L Sbjct: 24 VCLLASCGGSVNSNTTVPTSIMQIMQKPVYRNASWSMQVVDLDSGGAIYDLNSSTQMLIG 83 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNV-ENGVLKGDLVARFGADPTLKRQD----- 115 S +K+ + A LG D RF T + +G+V NG L G L+ D T+ + Sbjct: 84 SVRKLFSTGNAFNALGADHRFVTPVYRQGSVAPNGTLNGSLILVASGDLTMGGRANPDGT 143 Query: 116 ---------------------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKA 148 ++ A + +G+ I+G+V+ID +F + Sbjct: 144 TAFTAFDHNEANALGNAVLTTPDPLAGYDSLAAQVAAAGITTINGDVVIDDRLFEPFNFR 203 Query: 149 PGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLP 208 + V+ + V+L + + F ++ S + T Sbjct: 204 DQFD-----------VRPIFVNDDVVDVTLAQSAGGAAVPFDWRPKSAAFSVQSTLTTGS 252 Query: 209 RGSAEAQYCELDVVP---GDLNRFTLTGCLPQR-------SEPLPLAFAVQDGASYAGAI 258 S A + T++G +P + PL F V ++YA + Sbjct: 253 ATSKLAIDLNPESPTCIGAPNCGGTVSGNVPAGLVPPLTNTYPLVRTFRVTQPSNYARTV 312 Query: 259 LKDELKQAGITWSGTLLRQTQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 + L +AG+T + V VA SA L+ + K S N+ Sbjct: 313 FIEALARAGVTVTAAPAEANPVQLLPAKGSYSSSQQVAQLTSATYAQDLRFVNKVSYNIG 372 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 AD G A T A + L + DGSG + Sbjct: 373 ADVTLMQFGLAHNGST-TMANSLAAEQGELSATFNISPDQYHFIDGSGGG-DTTANARAV 430 Query: 371 MQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ----AGVDGKVSAKTGS------ 420 + +L+ ++ + LP+ G DGSL AG G+V AKTG+ Sbjct: 431 IAMLRGMSTKPAFAPYFDTLPVLGVDGSLASITDFEADSTLAGAKGQVHAKTGTYVTENP 490 Query: 421 -------LQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 L+G LAGFI SG+R+AF ++ + Sbjct: 491 AAPGTPILKG-QALAGFIDAKSGRRIAFFVTVNNVPITG 528 >UniRef50_B2T8J3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=2 Tax=Bacteria RepID=B2T8J3_BURPP Length = 544 Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats. Identities = 104/518 (20%), Positives = 187/518 (36%), Gaps = 87/518 (16%) Query: 8 IGLTSCIAFSVQAANVDEYITQLP-----AGANLALMVQKVGASAPAIDYHSQQMALPAS 62 + L SC V + I Q+ A ++ V + + D +S L S Sbjct: 19 VLLVSCGDSLSSNPTVPDSIMQVMQKPVYKNATWSMQVVDLDSGHVIYDLNSDAQMLVGS 78 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVE-NGVLKGDLVARFGADPTLKRQD------ 115 +K+ + +AL QLG +F T + +G ++ G L G+L+ D T+ + Sbjct: 79 VRKLFSVGSALNQLGAQHQFVTPVYRQGTLDAGGTLTGNLILLASGDLTMGGRANPDGTI 138 Query: 116 --------------------------IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAP 149 ++ + +G+ +I+G+V+ID +F Sbjct: 139 AITNFDHNEANSLGNAILATPDPLAGFNSLATQVAAAGIKKINGDVVIDDRLFEPF---- 194 Query: 150 GWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPR 209 D F+ V+ + VSL + + + F ++ S + T Sbjct: 195 -----DFRGEFN--VRPIFVNDDVVDVSLDQSAEGSAVPFDWRPRTAAFSVQSALATGSA 247 Query: 210 GSAEAQYCELDV---VPGDLNRFTLTGCLPQR-------SEPLPLAFAVQDGASYAGAIL 259 S ++ + +TG +P + PL F V + ++YA + Sbjct: 248 ASQLDIELAPELPLCIGSPGCIGNITGNVPAGFVPPLTNAYPLIRTFRVTEPSNYARTVF 307 Query: 260 KDELKQAGITWSGTLLRQTQV--------NEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 + L +AG++ + + V T VA S P ++ ++K S N+ A Sbjct: 308 IEALARAGVSVTAAPVAANPVQLLPAKGSYSSATQVAQLTSQPYEQYVRYVMKVSYNIGA 367 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 DT + G AR T A + L + DGSG + + ++ Sbjct: 368 DTSLMLFGLARDGST-TLSGALAAEQAELSTTFKIASNQYHFIDGSGGG-DSTASGTAVI 425 Query: 372 QVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG----VDGKVSAKTGS------- 420 +L+ ++ + LP+ G DGSL G+V AKTG+ Sbjct: 426 AMLRGMSTTQVFSPYFDALPVLGVDGSLATITAFESDATLAGAKGQVHAKTGTYVTENPN 485 Query: 421 ------LQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 L+G +LAG+I SG R+AFV ++ + Sbjct: 486 TPTLPFLRG-QSLAGYIDAKSGHRIAFVLTVNNVPISG 522 >UniRef50_A3I000 Hypothetical D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I000_9SPHI Length = 435 Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats. Identities = 87/470 (18%), Positives = 168/470 (35%), Gaps = 37/470 (7%) Query: 3 FSRFIIGLTSCIAF-SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 + ++GL ++ +VQ N + + + ++ M+ + +D +S + +PA Sbjct: 1 MKKLLVGLLILVSSCTVQKINKSLKNSDVLSQGHMGFMLLDPESDKVLVDINSDKYFIPA 60 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKRQDIRNMV 120 S K+ T + LG + N N + KGD L+ DP L D+ Sbjct: 61 SNTKLFTFYTSYSILGDELV---------NGLNYLEKGDSLIFWGTGDPGLLHPDLD--- 108 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 + + + D ++ + + PGW W+ ++ +A V N Sbjct: 109 NEVAINFLRASDKDLYLLDNFGQVDAFGPGWSWDWYNYYYATERSALPVYGNIVRFKFEE 168 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 ++ R + L ++ N F+ S+ Sbjct: 169 GQNNFTISPERFKPF-----------LEAKKTDSWNGYRFRRDRYKNLFSYQFTDVVPSD 217 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 P A +A +L + +G + Q + + Q+ P + Sbjct: 218 PFETDIPFVTSAEFAAQLLTEA---SGKKVR---VIQNEAYFQEDPI-KLQTTPADSIYA 270 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M+K SDN +A+ + ++ N T A + + +L+ I DGSGLS Sbjct: 271 QMMKISDNFLAEQLMLLVSDQLSNQLSTSDAIAYSKENLLKDL----PDEPIWVDGSGLS 326 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 N+ P +++ +L I + P G G+++ G + AKTG+ Sbjct: 327 AKNMFTPRSIIALLGKIRAEVPLEKIKAYFPAGGESGTIRNWYK-ADEGQPAYIYAKTGT 385 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 L L+GF+ T SG+ + F L+ YA+ ++ + + Y Sbjct: 386 LSMSNALSGFLITKSGKILHFSCILNNYALSGSELKRELEKTLYLIHDKY 435 >UniRef50_A0M516 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine endopeptidase n=1 Tax=Gramella forsetii KT0803 RepID=A0M516_GRAFK Length = 445 Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats. Identities = 82/475 (17%), Positives = 166/475 (34%), Gaps = 50/475 (10%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + S +I S I + + D + + + + +++++ P Sbjct: 16 LFLSSLLIISCSAIKKTNKEIETDFHESPVFKKGYAGFALYDPAIDKMLYTHNAEKYFTP 75 Query: 61 ASTQKVITALAALIQLG---PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR 117 AS K+ + L LG P ++TT + L+ + DP+ ++ Sbjct: 76 ASNTKLFSLYTGLKILGGSIPALKYTT------------VGDSLIFKGTGDPSFLNPELP 123 Query: 118 N--MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + LK S D + +F GW W+D +SA + N Sbjct: 124 KSHVWNFLKNS-----DKKLFYAPPVFKEKRLGSGWAWDDYDSYYSAEKIDFPIYGNLIE 178 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 + S P + + + + +Y + ++ + Sbjct: 179 IKFEKGASK--------PSIKPGLLSDSIHAIKPAKVKNKYVQREIASNKMEYQNF---- 226 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 P F +++ ++ L T + + + + S P Sbjct: 227 -----PREEDFTQNIPFNFSSELIVKLLSD---TLNRKVEIYRGDTKTLKFNKTLYSVPG 278 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 + K M++ SDN IA+ + M + T D +++ G + D Sbjct: 279 DSIYKRMMQVSDNFIAEQILLMAADKISDSLKT-SIAIDYMKE---NYLGDLLDEAKWVD 334 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+NL P +M+++++ I + + +L G G+L+ + Sbjct: 335 GSGLSRYNLFTPRSMIKLIEKIEKEMPKEELFKILAAGGESGTLKNYYKAETP----YIY 390 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 AKTG+L+ ++L+GF+ T SG+ + F S Y V ++ + ++ Y Sbjct: 391 AKTGTLRNNHSLSGFLITKSGKTLIFSFMNSNYTVPTSELKQGMTRILEMIRDNY 445 >UniRef50_A4CNT5 Putative uncharacterized protein n=1 Tax=Robiginitalea biformata HTCC2501 RepID=A4CNT5_9FLAO Length = 432 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 85/475 (17%), Positives = 164/475 (34%), Gaps = 64/475 (13%) Query: 3 FSRFIIGLTSCIAFSVQAAN---VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMAL 59 I + V+ N +++ + + +++ + ++++ Sbjct: 15 LGALAILVFLSGCSPVRKVNRHLNNQFQNEAHSNQFTGILLVDATSRDTLFSLNAEKYFT 74 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNM 119 PAS K+ T AAL L PD ++ + + DP+ D+ + Sbjct: 75 PASNVKLFTLYAALKTL-PD--------RVPALKYARHRDSVYVVGTGDPSALHPDLMD- 124 Query: 120 VATLKKSGVNQIDG--NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 + + I G +V + S PGW W+D + +A V N + Sbjct: 125 -----STALKFIRGFPHVTMVNSNLTDPAWGPGWSWDDFDAYYMPGRSAFPVHGNILRLI 179 Query: 178 LYSAPKPGDMAFIRVA--SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 Y + R + SQ+R + P + + Sbjct: 180 GYPDSLHVSPSIFRDSLSPRRGGRARSQLRNV-----------FLRTPSPGDTLDI---- 224 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 +G + +D +SG ++ + P T + + Sbjct: 225 ---------------PLRISGQLERDLWAA----FSGRVIVRGDTLPP-TPLETLPGMAS 264 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 L M+K+SDN IA+ + ++ + + A + + L V D Sbjct: 265 DSLYAKMMKESDNFIAEQLMLLVSGTQSDTLSFEAARDRVLEEFLPGMPQVP----RWVD 320 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR+NL P +++ +L + + E ++L G DG+L + V Sbjct: 321 GSGLSRYNLFTPESVVFLLDKLYREFPEPRLFALLAQGGQDGTLAEWYRDSASP---YVF 377 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 KTGSL +NL+G++ T SG+R+ F + + + L+++ Y Sbjct: 378 GKTGSLSNNHNLSGYLVTLSGKRVCFSMMNNHFTQPSDVIKENMQELLQWVRENY 432 >UniRef50_A3CXB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Methanoculleus marisnigri JR1 RepID=A3CXB9_METMJ Length = 531 Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats. Identities = 108/496 (21%), Positives = 178/496 (35%), Gaps = 65/496 (13%) Query: 22 NVDEYITQLP-AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 +D I+Q A +M + + + ++ P ST KV T AL LGPD+ Sbjct: 57 RIDAVISQERYDYATWGMMARDTSTGEVLLSMNGDRLFTPGSTTKVFTVSTALDVLGPDY 116 Query: 81 RFTTTLETKGNVENGVLKGDLVARFG--------------------ADPTLKRQD----I 116 RF T + G+ V GDL D L D + Sbjct: 117 RFRTPVYRVGDDLVLVASGDLAMGGRAGPNGTLAFTNEDHGDARAFGDCLLVDADPLAGL 176 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIF-ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 N+ + +G+ +D +V++D +F + + G +V+ N Sbjct: 177 ENLAEQVAAAGITAVD-DVIVDDRLFCETQMMSEGL------------VTPIVVNDNLID 223 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 V++ + T+ S+V T GS A +TG + Sbjct: 224 VTIVPGREGEPATADWRPRSSAYTIESRVVTGAPGSDPAVAI---PAYTGQALIEVTGTV 280 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV------NEPGTVVAS 289 P + P+ L V+ A++A ++ D L+ AG+ + VA Sbjct: 281 PADAGPVNLTSNVEIPAAFARSLFIDALENAGVAVVAPAAGENPSGRLPDEYGSVGRVAE 340 Query: 290 KQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIG 349 S P + K+ LK S N+ A+ + +I T AG L ++ GV+ Sbjct: 341 LVSLPFSEYAKVTLKVSQNLYANCLLGIIAAHEG--YDTVEAGLFVEGAFL-EEIGVNPD 397 Query: 350 NTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG 409 ++ADG G S N I+P + Y+A D LP+ G DG+L Sbjct: 398 TLLLADGEG-SIVNRISPLAATDLAAYMAGTDLYAPLSDALPVLGVDGTLAA-NAKPGDP 455 Query: 410 VDGKVSAKTGSLQG----------VYNLAGFITTASGQRMAFVQYLSGYA--VEPADQRN 457 G + AKTG+ G L G++TTA G + F Y++ A D + Sbjct: 456 GYGAIRAKTGTSAGGDQQGGIFLYTRGLLGYMTTAKGTPVTFAIYVNNIAGLASMDDLQG 515 Query: 458 RRIPLVRFESRLYKDI 473 + +Y+ + Sbjct: 516 VTDDVNDVAVLIYEYL 531 >UniRef50_C5PW65 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Sphingobacterium spiritivorum RepID=C5PW65_9SPHI Length = 454 Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats. Identities = 86/481 (17%), Positives = 171/481 (35%), Gaps = 55/481 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGAN------LALMVQKVGASAPAIDYHS 54 M+ F ++ + + + Q + A + +S + Sbjct: 18 MKLYLFSFFVSLLVYIMPVKGQISNDLQQKFSQAEGLKKHFYGFSLYDADSSRFLFGINE 77 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKR 113 ++ +PAS K+ T LAA+ L ++GD L+ DPT Sbjct: 78 EKHFMPASNTKIFTLLAAIHTLPDSI----------PGLQYTVRGDSLIFWGTGDPTFLH 127 Query: 114 QDIR--NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDR 171 + + LK SG ++ + GW D + + + + Sbjct: 128 NRLDSHKVYNFLKSSG-----KHLYYVPTASKEPFYRNGWSVEDYDEYYQPEISTFPIYG 182 Query: 172 NCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTL 231 + + A + G + V + +L D N F + Sbjct: 183 DVVTFR---AREKGSLRATPEYFQKDVHV-------KDDEKSKGKFKLTRA-FDKNIFYM 231 Query: 232 TGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQ 291 +G +R F D S +L D LK+ + E + V + Sbjct: 232 SGIDVKRGYVNEKPFKYSD--SLFLKLLVDTLKK---------DVKMISYEKPSDVKTVY 280 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQA-GVDIGN 350 S + +L+ M+ SDN +A+ M ++ T + +R+ ++Q+ Sbjct: 281 SNSRNKMLREMMLPSDNFMAEQFQMMSSLVKYGEFDT-----NRLREWMQQEYYKYFTDK 335 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQH-DNELNFISMLPLAGYDGSLQYRAGLHQAG 409 + DGSGLS +NL+ P ++ ++L + + + + P G DG++ R+ Sbjct: 336 VDLKDGSGLSVYNLVTPRSIAELLVVLQKDIPDTEILHKLFPTGGVDGTI--RSAYKLDR 393 Query: 410 VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + V AKTG+L V+ +G++ T SG+++ F + + + R + +V + + Sbjct: 394 GEPFVWAKTGTLNSVHCQSGYLITRSGRKLIFSFLNNNFVTSASTVRREMVNIVTYIRQN 453 Query: 470 Y 470 Y Sbjct: 454 Y 454 >UniRef50_C0ZYE1 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Rhodococcus erythropolis PR4 RepID=C0ZYE1_RHOE4 Length = 530 Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats. Identities = 98/504 (19%), Positives = 176/504 (34%), Gaps = 85/504 (16%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGA------------NLALMVQKVGASAPAIDYHSQ 55 + LT+C A + + Q+P A + ++ ++ Sbjct: 18 VVLTACSAKPSNSDSASAPAQQVPEEAARIMATDPYAMARWSYLLVDPATDEVVYSNNAD 77 Query: 56 QMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD 115 AS K T A LG D TT + G L GDLV D L ++ Sbjct: 78 SSMFLASQTKHFTVGTAYDTLGVDHTVTTPVYATSLPVEGTLTGDLVLVGSGDLALGGRN 137 Query: 116 ----------------------------------IRNMVATLKKSGVNQIDGNVLIDTSI 141 + ++ + +G+ +++G+VL+D + Sbjct: 138 AAQGRFDFATDGIDHVYADALPGAVLAPGDPLAGLNDLARQVADAGITRVNGDVLVDPRL 197 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 + ++ G + V+ + + A + + Sbjct: 198 WDTYSTVEGLVP------------SIFVNDSLVDIQASPGAVGEPAAIDMLPGNGLFRVD 245 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 +QV T GS + P D + +TG +P L + + D ++A + + Sbjct: 246 AQVTTGEEGSDSTLK--VAADPSDPTQLDVTGSVPAGKTSLTVY-RITDAPTWARQLFVE 302 Query: 262 ELKQAGITW-------SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 L++ GI S L + VAS QSAP+ + ++L S N A+T Sbjct: 303 ALRRNGIEVASVSRTNSTAALPVDRTYSGSRQVASLQSAPISESGGMILATSYNTGANTF 362 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 ++ A + + G VR L ++AG+ + ++ DG G + PA ++Q L Sbjct: 363 LCLLAVATGS--SSCSDGLPTVRA-LAEKAGIAASDLVVMDGQGGDP-SQSTPAAVLQWL 418 Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV---------- 424 ++ Q F + P+ G GSL + GKV KTG+ V Sbjct: 419 DWVDQQPWADTFWAGQPVLGERGSLSG--VGTDSPAKGKVIGKTGTSADVESDTGRLIVT 476 Query: 425 -YNLAGFITTASGQRMAFVQYLSG 447 L+G++ T +R+ FV +S Sbjct: 477 LQALSGYMITPDDRRLLFVVAVSD 500 >UniRef50_Q47KT6 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Nocardiopsaceae RepID=Q47KT6_THEFY Length = 464 Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats. Identities = 106/469 (22%), Positives = 168/469 (35%), Gaps = 84/469 (17%) Query: 14 IAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 + + A +D+ ++Q G L+ V + + +PAST KV+T++AAL Sbjct: 59 VDPARLADKLDDPMSQSGIGEGLSAYVIDAETHQELYARDADEGLVPASTTKVVTSVAAL 118 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD--------------IRNM 119 LGPD + T + G ++V G DPTL Sbjct: 119 HVLGPDAQIHTDVV------QGASPEEIVLVGGGDPTLTENADPHRYPRLASLEELAEQT 172 Query: 120 VATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLY 179 A L ++GV + + DTS +A PGW + + +A A +VD V Sbjct: 173 AAALSEAGVTAV--RLGYDTSAYAGEPLGPGWKQGYIDEGSTASVHALMVDCGLARVI-- 228 Query: 180 SAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRS 239 + G + + Y P Sbjct: 229 --DECGRIDIPVESKYGP------------------------------------------ 244 Query: 240 EPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLL 299 V D A +L +AGI+ T TQ ++A S P+ L+ Sbjct: 245 -------RVADPPLAAAEAFARKLDEAGISVLETPQ-PTQAPAGAELLARVSSPPISALV 296 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 + L SDN +A+ + R + A+ P ++ + AV ++ + + + ++DGSGL Sbjct: 297 EKTLMDSDNNVAEALARQVAIAQGEEP-SFAGAARAVMAVMDE---LGVAGVQVSDGSGL 352 Query: 360 SRHNLIAPATMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQAGV--DGKVS 415 S I + +L A +S LP A GSL R G V Sbjct: 353 SVDTRITSKALATLLVLAADPERPELYPVLSGLPTAHSTGSLSARYAPESDAASGAGLVR 412 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 AKTG+L GV +LAG I TA G+ + F + + A + Sbjct: 413 AKTGTLNGVSSLAGTIYTAQGRLLVFAFVANHPSATGAALDRLAAAVAE 461 >UniRef50_C6XXH2 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Pedobacter heparinus DSM 2366 RepID=C6XXH2_PEDHD Length = 450 Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats. Identities = 91/469 (19%), Positives = 162/469 (34%), Gaps = 52/469 (11%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPAST 63 + ++C +V + P + + + + H+ Q PAS Sbjct: 26 CPVLFSACSTEKQIGRSVKKVFADSPVLKKYYAGFALYDMATARMLFERHADQYFTPASN 85 Query: 64 QKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPTLKRQDIR--NMV 120 K+ T A L L V +GD L+ DP+L + ++ + Sbjct: 86 TKLFTFYAGLKMLPDSI----------PSLRYVERGDSLIFWGTGDPSLLQSKLKGTKAM 135 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LK S + + GW W+D + + A + N S+ + Sbjct: 136 EFLKAS-----PKKLFYAPGRYTGDFYGSGWQWDDYNEYYQAEINELPLMDNLLSLKAEN 190 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 ++ L S + Q N F P Sbjct: 191 GRLSMVPRLLKDC-------------LSADSGDTQKTFSVTRDFYTNHF----KYPA--I 231 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 PLP ++ + Y ++ + +L + ++ V + ++ +LK Sbjct: 232 PLPAGYSQEVP--YKVSLPLTLSLLSDTLKKTVMLAKMKMPADAKTVYNMRT---DSVLK 286 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M+ SDN IA+ + + + T +A S + L + DGSGLS Sbjct: 287 AMMLPSDNFIAEQLLLVYANQLGEELNTSKAISYIEKTYLSEL----PDKPRWQDGSGLS 342 Query: 361 RHNLIAPATMMQVLQYIAQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 R NL P M+++L+ I + N +M+P G G+L+ V KTG Sbjct: 343 RRNLFTPRDMIKLLELIYKQVNNPARLFNMMPAGGKSGTLRNAYPKTDQPF---VFGKTG 399 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 +L GV+N +G++ T G+ F + Y V AD RN + ++ + Sbjct: 400 TLSGVHNQSGYVLTKKGKTYIFSFMNNNYVVPTADVRNEMVRVMTYIHE 448 >UniRef50_C0QKM6 DacB n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QKM6_DESAH Length = 393 Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats. Identities = 105/469 (22%), Positives = 174/469 (37%), Gaps = 81/469 (17%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M F I L VQ+ I P + +V + Q +P Sbjct: 1 MPFLHKWILLLFLAMALVQS---PGAIAGTPK---IGYLVAD-SHGKVMDALNPDQAFVP 53 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR--- 117 AST K++TAL A +LG +FRF T + L + DP + + + Sbjct: 54 ASTFKLLTALGAFNELGENFRFKTKFFLGPDR-------TLKIKGSGDPLITSEILEKSC 106 Query: 118 -NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 ++ + L K GV+ I +++D F + PG T + A A + N S Sbjct: 107 CDLASILLKKGVSTIK-TLVVDNLFFEPDIQIPG--TGGSTNPYDAGVNALSANFNTVSF 163 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 D + P+ F++ R L G D R L+ Sbjct: 164 RF----DKHDGQLLSGEPQTPLLSFTRPRILASG-------------LDRGRIVLS---- 202 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA-PL 295 + +YAG ++K L+Q GI G + + QV + + + S L Sbjct: 203 -----------RIESRTYAGRLVKFFLEQKGIKVMGGV-EEGQVLQQDLHIYTHVSPYTL 250 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +L++ +L+ S+N +A+ +F G A F+ P + A+R G+ N IA+ Sbjct: 251 AELVRQLLQFSNNFMANQIFLTAGAAAFSPPASLEKSVGALRAYASNTLGI--ENISIAE 308 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSG+SR N I+P M++VL H + +N R + Sbjct: 309 GSGISRRNRISPREMLKVLMAFKSHYSLMN--------------HERDEFY--------- 345 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 KTG+L GV G+ T + F+ ++ + R +V+ Sbjct: 346 -KTGTLDGVRTRVGYFTGKNNSLFPFIIMINQQGQGYKIIKERLKSMVQ 393 >UniRef50_A8ZUJ7 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZUJ7_DESOH Length = 435 Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats. Identities = 97/464 (20%), Positives = 164/464 (35%), Gaps = 70/464 (15%) Query: 2 RFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPA 61 R + + A + ++QL + +++VQ++ + + + +PA Sbjct: 26 RTVAVLATAMVLCTVAFAPAFAERPLSQLLEPGD-SVLVQRMDDGRVVLAENPDTLLVPA 84 Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA 121 S K++T+LAA LG DFRF T T GDL+ + DP+L ++I A Sbjct: 85 SILKIVTSLAAFEILGKDFRFITEFYTTPG-------GDLIIKGYGDPSLVSEEIE--AA 135 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSA 181 + + + G++L+D S FA PG +Q + A A + N +V+ Sbjct: 136 AFRIAAMVPSVGDILVDASFFAPGIAVPGRKIG-SSQPYDAVNGALCANYNTVNVT---- 190 Query: 182 PKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP 241 D ++ P+ F++ R +G + Sbjct: 191 --RKDGRYVSAEPQTPLLDFARRRIAR-------------------MDPFSGRVA----- 224 Query: 242 LPLAFAVQDGASYAGAILKDELKQAGITWSGTLL-RQTQVNEPGTVVASKQSAPLHDLLK 300 A YAG + L++ G SG + + + S+ L D ++ Sbjct: 225 --FIEDASAAALYAGELFAWFLEKHGCHVSGKVACGRVEKGRDTLEFTHVSSSALGDNVE 282 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 +L+ S+N A+ + G + P G AV+ ++ +D + +GSGLS Sbjct: 283 KLLRYSNNFTANQLLLACGAKAYGPPADLARGVAAVQDYVKTVLAID--GMKVVEGSGLS 340 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R N ++ M VL P AG V G KTG+ Sbjct: 341 RENRMSARMMAGVLAAFE------------PYAGRM------------RVFGNEYYKTGT 376 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 L GV AG+ G R FV + V Sbjct: 377 LSGVNTRAGYFLYEDGPRYLFVVMSNTPGRSADVLMPEIRKRVE 420 >UniRef50_C4LKM4 Putative penicillin-binding protein 4 n=1 Tax=Corynebacterium kroppenstedtii DSM 44385 RepID=C4LKM4_CORK4 Length = 557 Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats. Identities = 99/471 (21%), Positives = 169/471 (35%), Gaps = 74/471 (15%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 A LA V + +S +PAS+ K++T AAL+ LGP R T + Sbjct: 128 ASNGALGQLAGQVTDASTGKTLWEKNSSTAMVPASSTKMMTTAAALLTLGPKDRVRTVV- 186 Query: 88 TKGNVENGVLKGDLVARFGADPTL----------KRQDIRNMVATLKKSGVNQIDGNVLI 137 + G G +V G D TL I+++ + +KK+ Q +V++ Sbjct: 187 -----KRGTKPGQIVLVGGGDVTLAASKDNAFYTNAPTIQDLASQVKKNMGGQPVTSVVV 241 Query: 138 DTSIF-ASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYY 196 D S W D++ + +++ S +P+ + A + + Sbjct: 242 DNSRAGQGDTFNSTWSRGDISGGNVTSVDSVMLNGGRQDPSDADSPRTDNPALVAGQALA 301 Query: 197 PVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAG 256 S + A+ D + +G + Sbjct: 302 NALGLSSSSSDDGNGADNAGDSGDFGESNDE----SGNSGGGDDN--------------- 342 Query: 257 AILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFR 316 G++ S V+ + + +SAPL + ML SDNM A+ + R Sbjct: 343 --------SQGVSVSKK-----SVDTEDGELGAVESAPLDIRIHDMLVNSDNMEAEAIGR 389 Query: 317 MIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQY 376 I P T+ + A +++L Q G + + ++ D SG+S N I P + +++ Sbjct: 390 EIAKKE-GKPLTFEGATSATKEVLSQH-GFPLESVVLKDNSGMSPDNRITPRLLDRIMVK 447 Query: 377 IAQ----------------HDNELNFISMLPLAGYDGSLQYRA--GLHQAGVDGKVSAKT 418 + + + LP+AG +G+L R G G V AKT Sbjct: 448 ASSPVTNEGNSDSSSADSQSHDLRPILDGLPVAGGNGTLAGRFTPGSSSGPGAGWVRAKT 507 Query: 419 GSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 G+L GV L G + G+ + F +G +EPA R L S L Sbjct: 508 GTLDGVSALVGTVMNQQGRVLTFAFMSNGSDIEPA-----RSALDDLASAL 553 >UniRef50_Q6AJD7 Related to penicillin-binding protein 4 [Precursor] n=1 Tax=Desulfotalea psychrophila RepID=Q6AJD7_DESPS Length = 413 Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats. Identities = 105/462 (22%), Positives = 172/462 (37%), Gaps = 68/462 (14%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R ++ L + + + + G S P +PAST Sbjct: 14 RLLLVLLAWVFLPTGWVSSSSLQEDIDHGGYWF-----TTTSKPL-RLKETTGFIPASTT 67 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TALA L LG D+RF+T G G L G DP L ++I + LK Sbjct: 68 KLVTALAGLRILGSDYRFSTDFLYDGK-------GALTIIGGGDPLLISEEIDKICRALK 120 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 GV+++ + ++TS+F P Q + A A +V+ N +V + Sbjct: 121 LRGVSRV-HTLRLETSLFHLPQ--PALGTEQTEQPYDAHNGALVVNFNSINVRVD----- 172 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + P A ++ + +R + + P+ Sbjct: 173 ETGIVLSAEEQTP--------------QLALMKDIVGLEAGKHRINVNQMVADDLPPVL- 217 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA-PLHDLLKIML 303 Y+G + LK+ GI + + + E +V QS+ L + + L Sbjct: 218 --------RYSGELFLALLKRNGINTEDARIARGKAVEKSQLVLHWQSSCNLQETIGKCL 269 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 K S+N IA+ +F IG ++ P TW G A+ ++ ++ + +GSGLSR N Sbjct: 270 KYSNNFIANQIFLQIGLHQYGAPATWEKGRRALNTFIQNDLRIEKSQLQLVEGSGLSRDN 329 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 I+P M+ VL +N + S+LP + KTG+L+G Sbjct: 330 HISPRAMITVL------ENFAPYHSLLPYNSQTRT----------------FIKTGTLRG 367 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 VY LAGF + FV +L+ I L R Sbjct: 368 VYCLAGF-QPRGEKLYPFVIFLNQIKNSRMSVLEDLIHLSRQ 408 >UniRef50_C7PJX0 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PJX0_CHIPD Length = 440 Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats. Identities = 85/485 (17%), Positives = 151/485 (31%), Gaps = 60/485 (12%) Query: 1 MRFSRFIIGLTSCIAF--SVQA--------ANVDEYITQLPAGANLALMVQKVGASAPAI 50 MR R ++ ++F V A A + + A+ + + + Sbjct: 1 MRSFRIVLSACLLLSFIKPVAAQYGPIRKWAEEELLTSAPLKQAHTGISIYEPATGKYWY 60 Query: 51 DYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPT 110 +Y PAS K+ T L LG T L + ADP Sbjct: 61 NYQEDHYFTPASNTKIFTLYTGLRLLGDSLPALRYFRTDSA---------LYVKGMADPA 111 Query: 111 LKRQDI-----RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPA 165 D ++ + +++ + + GW W+D + Sbjct: 112 FLHPDYNVQPAWQLLQQASQ--------PIVLVPAAIENKRFGSGWAWSDYADYYQPELN 163 Query: 166 AAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGD 225 V N V + GD I MF+ + L Sbjct: 164 EWPVYGNVARVRHH-----GDSTLIWP------RMFNDTVHFSVHRNDKLEELLTERDER 212 Query: 226 LNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGT 285 +NRF++T +S + G+ L+D L + + + Sbjct: 213 INRFSVTYNGNDKSVQEGEIPFITGGSDDLVYRLQDTLHK---PITIAAAGNRPAPASFS 269 Query: 286 VVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAG 345 ++ + P+ L + M+ +SDN A+ M ++ T R + + L Sbjct: 270 LL---RGIPVDTLFQPMMHRSDNFFAEQTLMMCSALLWDTISTARTIAFMQKSYLANL-- 324 Query: 346 VDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGL 405 DGSGLSR+NL P + VL + + ++ P G G+L+ Sbjct: 325 --PDTPKWVDGSGLSRYNLFTPRDFVSVLSDMYKSYPSQRLYALFPTGGK-GTLKNYYK- 380 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRF 465 V AKTG+L G L+G++ T + + F ++ + R + Sbjct: 381 -----QQFVHAKTGTLSGCVALSGYLVTKKNKTLVFSVLVNNHNNSATAVRRTVERFLTQ 435 Query: 466 ESRLY 470 Y Sbjct: 436 IWEQY 440 >UniRef50_B8FI39 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FI39_DESAA Length = 417 Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats. Identities = 93/467 (19%), Positives = 164/467 (35%), Gaps = 81/467 (17%) Query: 6 FIIGLTSCIAFSVQAANVDEYITQLPAGANLAL---------MVQKVGASAPAIDYHSQQ 56 + L ++ S A ++ ++ + Y+ Sbjct: 19 CLCLLFILVSGSRILAREPSLDLDASKDLPQSIARLLGPKDSLLAENSKGEILYSYNPNA 78 Query: 57 MALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI 116 + PAST KV T+L AL LG DF F T + G +G+L + DP L + + Sbjct: 79 LRTPASTFKVFTSLLALKILGEDFHFKTEIYQDG-------EGNLKIKGYGDPLLISEVL 131 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 + + + +++D+S F + + PG + AP A V+ N Sbjct: 132 EPLAGEIAFR--TKSCKQIVLDSSYFKTPLEIPG--TGSTANPYDAPVGALCVNFNTVFF 187 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + A A + + + LPRG A Sbjct: 188 T-CDANGKLASAEDQTPLIPFAEKIIRSKKLPRGRA------------------------ 222 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA-PL 295 L + YAG +L+ L++ G+ G ++ +V T++ +S L Sbjct: 223 ------LLTQEHEQTTLYAGHLLRYFLREKGV-VCGEVV-LGRVKPGDTLLFEHESPYSL 274 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 ++ L+ S+N I + VF +G P T + R+ + G+ + I+A+ Sbjct: 275 TEVAGKALEFSNNFIVNQVFLSVGAHEKGAPATLENAVNTAREFAAKDLGI--KDLIVAE 332 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSGLSR N I + MM+VL+ + +++ V Sbjct: 333 GSGLSRKNRITASQMMKVLRAFQPYQTLMHYEDG------------------------VW 368 Query: 416 AKTGSLQGVYNLAGFITTASGQRMA-FVQYLSGYAVEPADQRNRRIP 461 KTG+L GV L G+I + FV +++ R + Sbjct: 369 YKTGTLHGVRTLVGYIPEGDSDGLTRFVIFINTPGGSAQKVLGRILQ 415 >UniRef50_A3I3D7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Algoriphagus sp. PR1 RepID=A3I3D7_9SPHI Length = 435 Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats. Identities = 95/482 (19%), Positives = 174/482 (36%), Gaps = 70/482 (14%) Query: 4 SRFIIGLTSCIA-FSVQAANVDEYITQLPAGANL--------ALMVQKVGASAPAIDYHS 54 I L C + FS D+Y+ A + + + + + +S Sbjct: 9 KILFIFLLFCFSQFSYGQLTRDQYLKLESALGDQSFFSKHLSGFELYDLDSQTVVFERNS 68 Query: 55 QQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGD-LVARFGADPT--- 110 +Q +PAST K+ T A + L + +GD + DP+ Sbjct: 69 EQRFIPASTTKLFTLFAGVSILNDSTQ----------TLRYTTQGDTIRIWGAGDPSWGY 118 Query: 111 --LKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAI 168 L + + + +A + V+ + S GW W+D +SA + Sbjct: 119 KELYQPEFKKFLAPFQ---------TVIFSDANQDSPAFGYGWQWDDYYYDYSAERTSLP 169 Query: 169 VDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNR 228 + N V + +P + +S YP ++ EL+ Sbjct: 170 IFGNLVQVK-RNGNRPVVSPKVFQSSVYPTQRSTR--------------ELERDFHSNRF 214 Query: 229 FTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVA 288 + R E +P ++ + + + + I S +L ++ QV Sbjct: 215 YYNPNNFRGREEFIPFIYS---PELFT-QLASEATGKTWIYQSDSLPKENQV-------- 262 Query: 289 SKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDI 348 +++PL +LK M+ +SDN +A+ M+ F T RA ++ L Sbjct: 263 -WRASPLLPILKEMMLESDNFLAEQTMLMVSDRIFQRLDTERAIEYLLKTYLFDL----P 317 Query: 349 GNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQA 408 DGSGLSRHNL+ P TM+ + + I + + +LP G G+++ + Sbjct: 318 DKPQWVDGSGLSRHNLMTPRTMVALFEKIYRMLPDDQLYELLPTGGVSGTIENSYQAQEP 377 Query: 409 GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 + AKTG++ ++L G I T SG+ F S Y + + R ++ Sbjct: 378 ----YIFAKTGTMSNNHSLVGLIKTKSGKIYCFAFMNSNYPYKASVVRREMEKVMVMIRD 433 Query: 469 LY 470 + Sbjct: 434 ML 435 >UniRef50_C8NJZ8 Penicillin-binding protein, D-ala-D-ala carboxypeptidase n=5 Tax=Corynebacterium RepID=C8NJZ8_COREF Length = 421 Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats. Identities = 98/465 (21%), Positives = 154/465 (33%), Gaps = 92/465 (19%) Query: 8 IGLTSCIAFSVQAANVDEYITQLPAGANLA---LMVQKVGASAPAIDYHSQQMALPASTQ 64 I V + +++ +TQ A L V+ + PAS Sbjct: 46 IFRPVVATAEVDFSALNQQLTQAAADPRLGRFVGQVRDTATGEVIWSQNPDTPVRPASAT 105 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA AAL +LG D T + G G V R D TL + ++ A L Sbjct: 106 KILTAAAALYELGWDDTIHTDVVV------GQTPGTAVIRAAGDVTLSTDQLDDLAAQLT 159 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 ++ + L+DTSI++ APG + Sbjct: 160 GQDIDTV----LVDTSIWSDETFAPG-------------------------------WER 184 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 D+ +A PV + G + LP Sbjct: 185 IDIDAGYIAPVEPVMIEG------------------------------GRIGGSHGDLP- 213 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 A L T + V+A+ +S L L+ M++ Sbjct: 214 --RTHTPALDVAQALAQ-------RIGATDTGKGTAPADALVLATTESENLEQRLRRMME 264 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 +SDN++A+ + R R T + + IL++ G D+ I D SGLS NL Sbjct: 265 ESDNVMAEAIGRETAQNRGAATDTGSSAQLTM-DILKEH-GFDLRGVSIVDNSGLSFDNL 322 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 I P + +L A + ++ LP+AG +G+L R G V AKTG+L Sbjct: 323 ITPRLLDDILHAAATDETLRPLLNTLPIAGGNGTLVDRYD--DLSGAGWVRAKTGTLTAT 380 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 LAG +T S + F + + D R + Sbjct: 381 SALAGTVT--SDRVYTFAFVSNDSNIP--DARAAMDEMASVLREF 421 >UniRef50_A6EDL0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDL0_9SPHI Length = 448 Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats. Identities = 83/469 (17%), Positives = 149/469 (31%), Gaps = 51/469 (10%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPAS 62 L+ C A A+ + + + P + + +++ +PAS Sbjct: 24 FCAQLLSGCSADRRLASTLKKTFKRSPVLRQYQAGFALYDPENDRMIFEKDAEKYFIPAS 83 Query: 63 TQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIR--NMV 120 K+ T A L L + V L+ DP+ + ++ Sbjct: 84 NTKLFTFYAGLKILPE---------RVPALRYVVRNDSLIFWGTGDPSFLQSRLKGKKAF 134 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 LK+S + + + GW W+D + A + N S+S S Sbjct: 135 DFLKQSQLQ-----LFYAPGRYTGQVYGKGWAWDDYNDYYQAEINDFPIQDNLVSLSEKS 189 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 + F R + R + + A + VP + +P + Sbjct: 190 SLLQVSPGFFRDCLFKDADTAGPFRVVRDFNTNAFHYHDRPVPQGYHE-----QVPYKLS 244 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + D L + G L + ++ + P LL+ Sbjct: 245 LATTLSLLAD-----------TLGR------GVSLLELKMPADAQTIEDV---PRDSLLR 284 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M+ SDN IA+ + + + T + ++ L DGSGLS Sbjct: 285 EMMLPSDNFIAEQLILLYANQTGIEMNTDTTINYILKTYLSDL----PDRPSWVDGSGLS 340 Query: 361 RHNLIAPATMMQVLQYIAQHDNELN-FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 R NL P + +L I + N +MLP G G+L+ + V KTG Sbjct: 341 RMNLFTPRDITFLLNKIYKTVNNPERLYAMLPAGGKTGTLKNAYPATEKPF---VFGKTG 397 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 S +N +G++ T G+ F + Y + A R + ++ Sbjct: 398 SFSNNHNQSGYVLTKKGKTYLFSFMNNSYTLPTAAVRQEMVRIITEIHE 446 >UniRef50_C0WGS1 D-alanyl-D-alanine carboxypeptidase n=5 Tax=Corynebacterium RepID=C0WGS1_9CORY Length = 451 Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats. Identities = 99/434 (22%), Positives = 165/434 (38%), Gaps = 84/434 (19%) Query: 14 IAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL 73 + F+ +A +DE A V + + + PAS+ KV+T AA Sbjct: 82 VDFAALSAKLDELGKN-EDLATFGGQVIDSETGTVVWERAADKALTPASSTKVLTTAAAT 140 Query: 74 IQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDG 133 + L R TT + G ++V + D + + + ++ +KK+G Q+ G Sbjct: 141 LALDESKRITTKVYR------GKDPNNVVIKAAGDVWMTNEQLDDLANQIKKTG-TQVAG 193 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 V IDTS +A +APG W+ P ++ VA Sbjct: 194 -VYIDTSAWAGEPQAPG--WD-----------------------------PENVDEGFVA 221 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 P ++ G + +P A Sbjct: 222 PMEPAMLYG------------------------------GRIGATEGDVP---RSHTPAL 248 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 L L V E +AS +SAPL + M++ SDN++A+ Sbjct: 249 DVAGELAKRL-------GTDKFAPGTVTEGAEELASVESAPLSERALEMVRHSDNVMAEA 301 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + R + AR P +++A + A +LR+ G D+ I D SGLS N ++ + + ++ Sbjct: 302 IARELADARGKQP-SFQADTQATLDVLREH-GFDVSGVDIKDNSGLSVDNRLSASVLAEI 359 Query: 374 LQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 + + + LP+AG DG+L R G ++ G V AKTG+L GV LAG Sbjct: 360 VNGAVEEPQLRPLAAYLPVAGGDGTLHERYG--ESAARGFVRAKTGTLTGVSALAGTAQG 417 Query: 434 ASGQRMAFVQYLSG 447 SG+ +F ++ Sbjct: 418 QSGRVYSFAFLVND 431 >UniRef50_C5S666 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Allochromatium vinosum DSM 180 RepID=C5S666_CHRVI Length = 409 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 95/455 (20%), Positives = 166/455 (36%), Gaps = 72/455 (15%) Query: 5 RFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 R ++ + + A D+ + Q+ A +L+V++ G Y ++ +PAST Sbjct: 21 RLVLIAALWLGLA-HTALADDPVAQVRALPQASLLVKERGQDRI--AYQAETARIPASTM 77 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLK 124 K++TA AAL G D RF T + + G L + ADP L +++ +VA LK Sbjct: 78 KLLTAYAALETWGRDHRFHTDVFQDAS-------GWLWVKGAADPYLVSEELDRLVAALK 130 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + GV ++ G + +D S+F + G + + + AP A + N Sbjct: 131 RQGVRRVAG-IGLDDSLFDPDVEIAGRSSS--SNPYDAPVTALAANFNTL---------- 177 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 + +R R + L L R G + Sbjct: 178 -----------------NLIREGERIRSAEPQTPLTATGERLGRSGAAGKQRINLREREI 220 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK-QSAPLHDLLKIML 303 A Y G +L +L+ A I G R + S L +++ ML Sbjct: 221 ALR------YFGELLAAKLRAADIEV-GDPQRIAPTPSDAKRILRHANSRTLAEMVAPML 273 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 + S N +A+ +F + + + +++ G I DG+GLSR N Sbjct: 274 EYSSNFVANALFLRLAAPDGQGRISMTQAKRTMTDFAQRRFGW--TAFKIDDGAGLSRAN 331 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQG 423 ++ ++++L A YR + Q D V AKTG+L+G Sbjct: 332 RLSARQLVELLDAFAP---------------------YRDLMPQQDDDPNVRAKTGTLRG 370 Query: 424 VYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNR 458 + + AG++ G F + +R Sbjct: 371 ISSYAGYVR-RGGAWEPFALLIEQPVAYDLRRRVA 404 >UniRef50_Q31HI4 D-Ala-D-Ala carboxypeptidase 3 (S13) n=1 Tax=Thiomicrospira crunogena XCL-2 RepID=Q31HI4_THICR Length = 415 Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats. Identities = 88/447 (19%), Positives = 162/447 (36%), Gaps = 73/447 (16%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 +F + AA + + + + ++ P I+ + ++ +PAST K++TA Sbjct: 14 LLLGSFLLHAAPASVSLKEALSQLHETGVLMLNAQQEPVIEKDASKLRVPASTTKLVTAY 73 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVA----TLKKS 126 AL G D+RF T L + DP L ++I+ + LK S Sbjct: 74 LALKHWGADYRFKTDFYITRTTHG---TSSLWVKGYGDPFLVSEEIQKLAENLAYRLKAS 130 Query: 127 GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGD 186 G+ +D +++DT F ++ PG D + A P A + N + K Sbjct: 131 GIKTVD-EIILDTGYFETNVVLPGRSNTD--NPYDAIPGALAANFNTLYL------KKVR 181 Query: 187 MAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAF 246 A + P+T + V + G Sbjct: 182 GAIVSAEPQTPLTPLA-------------------VALGKHTNLKHGRFNLGGNAKT--- 219 Query: 247 AVQDGASYAGAILKDELKQAGITWSGTL----LRQTQVNEPGTVVASK-QSAPLHDLLKI 301 G Y +L L+++GI + + L Q + S L ++++ Sbjct: 220 ----GERYFAELLSVFLQRSGIAVAQNVKWRSLNHQQDLKESPPFYRHLNSLTLAEIIQP 275 Query: 302 MLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSR 361 M++ S N IA+ + + R VP + +R L G + + DG+GLS Sbjct: 276 MMRYSTNFIANQLALKLSAERLGVPASPEKVKQMMRTDLTHYLGW--QDFYLEDGAGLSH 333 Query: 362 HNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSL 421 N ++P ++ +L + + S+LP ++ ++ AK+G+L Sbjct: 334 QNRLSPQQLVVLL------EAFRPWKSLLP-----------------EIEDQIFAKSGTL 370 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGY 448 GV LAG+I + F ++ Sbjct: 371 IGVSTLAGYI-YQQQHWLPFALMINQP 396 >UniRef50_C7MQK2 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=1 Tax=Saccharomonospora viridis DSM 43017 RepID=C7MQK2_SACVD Length = 517 Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats. Identities = 100/460 (21%), Positives = 159/460 (34%), Gaps = 79/460 (17%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 + A +D+ +T G L V + ++ Q PAST K++T+ AAL+ Sbjct: 122 TPAGVGAAIDDLVTDPALGTLLG-SVVDPATGTTLWERNADQALAPASTTKLLTSAAALL 180 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 L D RF T + G G +V G D TL + Sbjct: 181 VLDHDMRFPTKVVA------GAEPGTVVLVGGGDVTLSS--LPE---------------- 216 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 + SIF P AA +D V + + + A Sbjct: 217 --GEESIF---------------------PGAAHLDDLVEQVREATGGQVSRVELDLSAF 253 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 P G A L G + + D A + Sbjct: 254 TGP----------TEGRDWAPEDVPSTYMVQTQPVMLDG--GRTDPTDEGSMGRSDPAGH 301 Query: 255 AGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTV 314 + L T E V+ S P+ +L+++ L +SDN++++ + Sbjct: 302 LVETFAERL-------GAEAGGTTTAPEGAKVLGEVWSPPVDELVRVALVESDNLVSEVL 354 Query: 315 FRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVL 374 R + A P ++ ++A ++L + GVD+ + DGSGLS N I PAT+ Q+L Sbjct: 355 ARQVAIAEGKQP-SFEGAAEATLEVLSRH-GVDVTGVELNDGSGLSPSNRIPPATLTQLL 412 Query: 375 QYIAQHDN-------ELNFISMLPLAGYDGSLQYRAGL-HQAGVDGKVSAKTGSLQ--GV 424 A D + LP+AG G+L R G V AKTG++ V Sbjct: 413 AMAASPDTDNEVTVKLRPLLDGLPVAGGSGTLSTRYDQGPATQGRGWVRAKTGTIPVERV 472 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 + LAG + T + + F +G +R +R Sbjct: 473 HTLAGVVLTEDDRVLVFALMSNGGDSGAPAALDRISARLR 512 >UniRef50_D2QFU8 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QFU8_9SPHI Length = 400 Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats. Identities = 84/431 (19%), Positives = 140/431 (32%), Gaps = 56/431 (12%) Query: 37 ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG---PDFRFTTTLETKGNVE 93 + + G I +++ + PAS K+ + A L+ L P R+ T Sbjct: 17 GVALYDPGQKRALIQHNADKPFTPASNTKLFSFYAGLLSLHDSLPTLRYITR-------- 68 Query: 94 NGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPW 153 L+ +P L D+ + A + + + + + PGW W Sbjct: 69 ----NDSLIFWGTGNPLLLHPDLPDTTA---LAFLRSRPERLFFSPANYTGPRFGPGWAW 121 Query: 154 NDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAE 213 +D +SA A V N S P T+ Sbjct: 122 DDYNDDYSAELAPLPVYGNVVRFSAG--------------KTSPARFTDSTHTVADAPGG 167 Query: 214 AQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGT 273 E P + + A +L D L +A Sbjct: 168 VYRTEFGNQFVR----------PANDKVKRQDVPFRWSGELAAQLLADTLHRAVGVVKMP 217 Query: 274 LLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 ++ ++ + L K ML SDN A+ V M P A Sbjct: 218 IVANARLLRGSST---------DSLYKRMLFVSDNQFAEQVLFMASTEHSTGPLDPLAEL 268 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 L+ G+ DGSGLSR+N P ++ +L I + ++LP A Sbjct: 269 RRTADSLQHTTTFK-GSARWVDGSGLSRYNQFTPNVLIDLLSRIYARVPQQRLFALLPAA 327 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA 453 G G+L+ V AK+GS+ GVYNL+G++ T + + F + + + Sbjct: 328 GQSGTLKS----LDMKGKPYVFAKSGSMTGVYNLSGYVLTKRNRLLYFSIMHNNFTQTVS 383 Query: 454 DQRNRRIPLVR 464 + R R L++ Sbjct: 384 EMRRRTAELLK 394 >UniRef50_Q1NK58 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Deltaproteobacteria RepID=Q1NK58_9DELT Length = 428 Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats. Identities = 98/431 (22%), Positives = 169/431 (39%), Gaps = 68/431 (15%) Query: 44 GASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVA 103 ++ + PAST K+ TAL AL +LG D+RF T T G+ DLV Sbjct: 38 RDGRLLAAHNLDRPLTPASTWKIATALLALERLGEDYRFQTLFYTAGD--------DLVI 89 Query: 104 RFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFA-SHDKAPGWPWNDMTQCFSA 162 DP L +++ + A L +GV +++ N+++D S F H PG + + A Sbjct: 90 EGRGDPLLVSEEVAAIAARLAAAGVKRLE-NLILDDSFFRLEHSPPPGAGTS--RRSHDA 146 Query: 163 PPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVV 222 A +V+ N + + +A + + + ++ T Sbjct: 147 ANGALVVNFNTVHLEIGTAGQVSSA----EEQTPTLPLMHKLATGLAA------------ 190 Query: 223 PGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNE 282 +R LT C ++ Y+G + + L Q GI G ++ + Sbjct: 191 --GRHRLNLTSCDVTEHGACEVSKQYS--QRYSGELFRHLLAQHGIEIDGNVV-SGRRPA 245 Query: 283 PGTVVASKQS-APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILR 341 ++ S L +++ ML S+N +A+ + + P TW G + L Sbjct: 246 DSQLLYRHHSSRTLAEVVAEMLLYSNNFVANQLLLTVAALE-QPPATWEKGRQTLAAYL- 303 Query: 342 QQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQY 401 ++AG+ + +A+GSGLSR N I P + +L+ H L Sbjct: 304 EEAGLAANSFQVAEGSGLSRANRITPRALGHLLELFKPHAQLL----------------- 346 Query: 402 RAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA--SG--QRMAFVQYLSGYAVEPADQRN 457 +G+ K+G+L+GVY AG+ +G FV L +PA+ R+ Sbjct: 347 -------PREGQKLLKSGTLRGVYAYAGYFQHPAANGAAGLDPFVLIL----EQPANTRD 395 Query: 458 RRIPLVRFESR 468 R + L+ R Sbjct: 396 RALELLEQHYR 406 >UniRef50_A9BIW7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Petrotoga mobilis SJ95 RepID=A9BIW7_PETMO Length = 453 Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats. Identities = 82/444 (18%), Positives = 169/444 (38%), Gaps = 88/444 (19%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 + ++ +G + +Y+S ++ +PAS K+ITAL AL LG +++F T + G + Sbjct: 97 QGFVGFELRDLGTNEVLFNYNSDKLFIPASNTKLITALVALESLGDNYKFETKIYHTGEI 156 Query: 93 ENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWP 152 +G+L + DP L + + LK++ V++ + Sbjct: 157 SP-NFRGNLYIKGFGDPVLTSLQYKEI---LKRATVDRGIKRIY---------------- 196 Query: 153 WNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSA 212 D+ + S + G ++ + + +T Sbjct: 197 -GDIIFDY----------------SFMTEEGFGRG-WMWDDPQPQIAAINIWQT------ 232 Query: 213 EAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSG 272 S ++D ++ + L++ G+ + G Sbjct: 233 -----------------------SYESFKYKTNHEIKDYINFLTTLF---LQEIGVEFWG 266 Query: 273 TLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAG 332 + R +V ++ + S PL ++++ ML+ SDN IA+ +FR +G N G Sbjct: 267 EI-RYDEVPFNANLLYTNHSPPLINIIQQMLETSDNQIAEQIFRNLGAIYGN--GKIEDS 323 Query: 333 SDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL 392 + ++++++ G D + +I DG GLS +NL+ P + L Y+ + F L Sbjct: 324 ENHFQKVIKETLGYDPTDYVIKDGCGLSMYNLLPPKMISDTLFYLY-SKYQSKFFDYLAS 382 Query: 393 AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEP 452 +L+ R + AKTG+L ++G + SG+ F + ++ Sbjct: 383 PYEKSTLENRFNFE-------IYAKTGTLYYDSAISGIFKSKSGKYYIFSLMENNFSF-- 433 Query: 453 ADQRNRRIPLVRFESRLYKDIYQN 476 + + FE+ + +Y+N Sbjct: 434 -----DVLKVKEFENSIINYLYEN 452 >UniRef50_A4F6R6 Putative uncharacterized protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4F6R6_SACEN Length = 1264 Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats. Identities = 98/478 (20%), Positives = 160/478 (33%), Gaps = 107/478 (22%) Query: 9 GLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 G V AA PA V AP Q PAST K++T Sbjct: 864 GAPLPRQQRVSAALAGPLAN--PALGTFGGTVIDAQTGAPVWQQSPGQALTPASTGKLLT 921 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR------------QDI 116 AAL+ L RF+T + G G +V G DPTL I Sbjct: 922 MSAALLALDHQQRFSTKVVR------GPEPGSVVLVGGGDPTLSTLGPGEDTVYTGAARI 975 Query: 117 RNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV 176 ++ ++K+ + + +D ++ Sbjct: 976 DDLAEQVRKATGGSVS-RIYVDVGRYSGP------------------------------- 1003 Query: 177 SLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLP 236 + P D+ VA P+ + Sbjct: 1004 KMAPGWLPEDVQAGYVAPMEPLML---------------------------------NGG 1030 Query: 237 QRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLH 296 + + Q A AG L +L +++ V+ +S P+ Sbjct: 1031 RADPTKDTSPRTQTPALQAGQRLASKL-------GTGSVQEGNAPVNAQVLGEVKSPPVQ 1083 Query: 297 DLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADG 356 D+ +I+L+ SDN++A+ + R + A N P ++ S AVR++L Q+ G D+ + DG Sbjct: 1084 DMAEIVLQHSDNVLAEALAREVAIATGNEP-SFAGASKAVREVL-QRNGFDLSGNTMVDG 1141 Query: 357 SGLSRHNLIAPATMMQVLQYIA-----------QHDNELNFISMLPLAGYDGSLQYRAGL 405 SGLS + + P + +L + + LP+A GSL R Sbjct: 1142 SGLSLDDRVTPQLLGSLLAAATAPAGPEGGLEPKSAKLRALLPGLPVAAGSGSLHDRY-- 1199 Query: 406 HQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + G V AKTG+L G +LAG + T +G+ + F +G A + + Sbjct: 1200 TDSSGRGWVRAKTGTLDGANSLAGTVVTENGRLLVFALMSNGTMSAQARPALDDLAIA 1257 >UniRef50_A4AQH7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Flavobacteriales bacterium HTCC2170 RepID=A4AQH7_9FLAO Length = 422 Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats. Identities = 83/470 (17%), Positives = 160/470 (34%), Gaps = 55/470 (11%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 + FS IG +S V+ + + ++ + + + +S + P Sbjct: 8 LLFSFLFIGCSSARKSLVKKID-SSINSDDYNNQFTGFLLVDIESRDTIYNVNSTKYFTP 66 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS K+ T +L L ++ K L DP+ + + Sbjct: 67 ASNTKIFTLYTSLKLLPE---------RIPALKYIEKKDTLFVEGTGDPSFLHPSLND-S 116 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 K + NV + F PGW W+D +SA V N + Sbjct: 117 TAFKFL---EKHDNVALHLDNFNDAKFGPGWSWDDYHYYYSAERNGFPVFGNILT----- 168 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 + + LP ++ + + +L + T + + Sbjct: 169 -----------------IQNSDSLNILPSFFQDSIIDKEYYINRELEQNTFYFN-STQKD 210 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 + + VQ +L++ LK+ SG + V+ QS + + Sbjct: 211 TVEIPLMVQK--GLTKNLLENILKKEVRLVSGM------PSGEKKVLYGIQS---DSVFR 259 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 M++ SDN +A+ + ++G + + + D + L+ DGSGLS Sbjct: 260 RMMEVSDNFLAEQLL-IVGSSTLSDTLNSKKSRDFI---LKNHLSGLRQPPRWVDGSGLS 315 Query: 361 RHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGS 420 R+NL P +M+ +LQ + + P G G+++ + AKTGS Sbjct: 316 RYNLFTPESMVHILQKLYSEIPKERLFQFFPTGGVSGTIEDWY---AGNTKPYIYAKTGS 372 Query: 421 LQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 L + L+G++ T SG+ + F + + + + R + Y Sbjct: 373 LGNNHCLSGYLITNSGKTLVFSFMNNHFMESSSVIKERMQTIFEEIRDNY 422 >UniRef50_B4V6I2 Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Streptomyces RepID=B4V6I2_9ACTO Length = 536 Score = 227 bits (579), Expect = 6e-58, Method: Composition-based stats. Identities = 95/474 (20%), Positives = 156/474 (32%), Gaps = 71/474 (14%) Query: 32 AGANLALMVQKV-GASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 A L+ + Q +P ST K+ LG RF T L G Sbjct: 60 RHAQWGLLQTEPGADGRVLRSLFPGQFFIPGSTAKLFPVSGTWQTLGAGHRFVTPLYEVG 119 Query: 91 NVENGVLKGDLVARFGADPTLKRQ--------------------------------DIRN 118 L GDL D T+ + I Sbjct: 120 KRSGETLIGDLDLVAQGDLTMGGRTRPDGTVAYTDLDHTYANDFPGATLTPENPLAGIDQ 179 Query: 119 MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 + ++ SG+ +DG+V++D+ +FA P I++ N + Sbjct: 180 LARQVRDSGITGVDGDVIVDSRLFAPDPV------------LDPTPTPLIINDNLIDLLT 227 Query: 179 YSAPKPGDMAFIRVAS-YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + G A + P + S V+T+ G R L+G + Sbjct: 228 TPGDRAGAAARLDWRPKVAPYEVTSTVKTVAAGGPTDVT---VTATDGGTRIRLSGTIAA 284 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQV------NEPGTVVASKQ 291 + PL V D A++ L + L +AG+ + + VA+ Sbjct: 285 GAAPLLRTSPVTDPAAFGRTALIEALARAGVEVTSPATGPNPAARLPRDYDGRPRVAAYT 344 Query: 292 SAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNT 351 S P K++LK S N+ A+ ++ + G + L +AGVD Sbjct: 345 SPPYEQYAKLILKVSHNLGANLDICLLAVTTGSHQ--CADGFPVLAGFL-DRAGVDRRQV 401 Query: 352 IIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 + DG G + + P ++++L Y + F LP+ G DG L Sbjct: 402 ELMDGRGGNPADRATPRAVVRMLAYWQGTPDARRFREALPILGVDGLLAENC--RDCPAR 459 Query: 412 GKVSAKTG------SLQ-----GVYNLAGFITTASGQRMAFVQYLSGYAVEPAD 454 GKV AKTG +L G +AG++ G+ F ++G + D Sbjct: 460 GKVFAKTGAAVGGDALNDRFSVGAITIAGYLDKGGGRFDPFYAGVTGASTANTD 513 >UniRef50_Q6NF89 Putative D-Ala D-Ala carboxypeptidase n=1 Tax=Corynebacterium diphtheriae RepID=Q6NF89_CORDI Length = 426 Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats. Identities = 100/447 (22%), Positives = 160/447 (35%), Gaps = 98/447 (21%) Query: 26 YITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTT 85 + Q P A A + ++ + + PAS K++TA AAL +LGP+ R TT Sbjct: 78 ALAQDPRLAGFAGKIVDATTGEVILEKDADKPLTPASATKMLTATAALYELGPEHRITTE 137 Query: 86 LETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASH 145 + + + +V + D L + + + +K+ VL+DTS ++ Sbjct: 138 VIKQDDH-------TVVIKAAGDVWLTDERLDQLARKIKEQ--MPSVNTVLVDTSAWSGD 188 Query: 146 DKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVR 205 GW + D+ VA P+ ++ Sbjct: 189 KILGGWDPD-------------------------------DVNAGYVAPLEPIMLYG--- 214 Query: 206 TLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQ 265 G L + +P + A L L Sbjct: 215 ---------------------------GRLGAKEGDVP---RSHNPGLDVAAALAQRL-- 242 Query: 266 AGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNV 325 G + + G VVA+ +S L + M++ SDN++A+ + R I + Sbjct: 243 ------GAGTKGYTDSATGEVVATTESEALEKRISQMMQHSDNVMAEAIGREIDATQP-- 294 Query: 326 PGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELN 385 A +IL + G+ IG + +AD SGLS HN I PA + QV + Sbjct: 295 -------VQATLRILSEH-GITIGASEVADNSGLSLHNRITPALLTQVATKAVTDPEVHS 346 Query: 386 FISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYL 445 I LP+AG G+L R + G V AKTG+L GV L G + + SG +F Sbjct: 347 LILALPVAGGSGTLADRYA--ELDGRGWVRAKTGTLTGVSALVGVVPSTSGHIYSFGLIS 404 Query: 446 SGYAVEPADQRNRRIPLVRFESRLYKD 472 +G ++ R L S L Sbjct: 405 NG-----SEILEARAALDTIASALRDA 426 >UniRef50_UPI000050FDCA D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Brevibacterium linens BL2 RepID=UPI000050FDCA Length = 485 Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats. Identities = 99/480 (20%), Positives = 174/480 (36%), Gaps = 101/480 (21%) Query: 16 FSVQAANVDEYITQLPAGANL---ALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 + + + + ++ + A + + ++ + + + PAS KV+T AA Sbjct: 79 SAPVPTAIPDEVDKVLSDAKVKGFGIEIRDGLSDDILYAKNENKPRTPASVTKVLTGSAA 138 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK-----------RQDIRNMVA 121 L+ +G + R +TT + + + G D L + + Sbjct: 139 LLTIGGEKRLSTTTQFDPATS------TVTLQGGGDSLLGAGESQPGAVNGHAGLATLAQ 192 Query: 122 T----LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 LK V ++ ++ DTS ++ D +PGW Sbjct: 193 QTAESLKSQNVAEVALDL--DTSRYSGKDFSPGWE------------------------- 225 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 D+A + P+ + TG + Sbjct: 226 ------RVDIAKGVITPIQPLMID------------------------------TGYV-- 247 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPG-----TVVASKQS 292 S+ + A A A+ ELK AGIT S + G T +A +S Sbjct: 248 GSKDKEWRGRSEHPAKDAFAVFTKELKAAGITVSKDPQPADATDATGDEAKPTELAEVES 307 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 A + ++++ L SDN++A+ + + A+ PG+ AG AV L VD+G T Sbjct: 308 ATISEIVEYALVHSDNVVAEVLGNEVAIAQ-GEPGSLEAGPQAVLDALSDT--VDLGQTH 364 Query: 353 IADGSGLSRHNLIAPATMMQVLQY-IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVD 411 + D SGLS N I+P + +LQ + D+ + I+ +P+ G G+L R Sbjct: 365 LEDTSGLSYDNQISPHDLTTILQASVVADDSLSDLIAAMPVGGLTGTLTDRFT-KDRNAA 423 Query: 412 GKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 G V AKTG+L V +LAG + A G+ + F + + R + + L Sbjct: 424 GAVHAKTGTLSTVTSLAGGVLDADGRYLVFTLQIDDV--DKDKILEARKTVDDIVAALAN 481 >UniRef50_C0VXH6 D-alanyl-D-alanine carboxypeptidase n=2 Tax=Corynebacterium glucuronolyticum RepID=C0VXH6_9CORY Length = 414 Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats. Identities = 100/456 (21%), Positives = 147/456 (32%), Gaps = 101/456 (22%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQL 76 QA ++ G + V V + ++ PAS KV+TA AA+ L Sbjct: 59 PAQAPELEALSQDPALGEFFGI-VTDVQTGETVWEKNADVPGRPASITKVLTATAAVHAL 117 Query: 77 GPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVL 136 R T + G+ + G D L + + + V+ Sbjct: 118 PAGHRLVTEVYADGDTS--------YIKAGGDVWLSDTSLDRLAGMVT-------TPRVV 162 Query: 137 IDTSIFAS-HDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 +DTS++ AP W D+ F A Sbjct: 163 LDTSVWDGFEPFAPTWDPADIDAGFVA-------------------------------PI 191 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 PV + +Q R TG +P+ P A Sbjct: 192 EPVMI-NQARIDAT----------------------TGDVPRSHTP-------------A 215 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 +L ++G T + V T + + +S L D L M+ SDN++A+ + Sbjct: 216 QDVLASVAARSG----ATPAGLSTVPPTATKIGTVESPRLDDRLNAMMDHSDNVMAEAIG 271 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 R + A+ DAV L + + D SGLS N IAP T+ L Sbjct: 272 RELAVAKGAT-----NPVDAVIAELHA-LSIPTDGLNLNDCSGLSADNRIAPRTIDIALY 325 Query: 376 YIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTAS 435 A D + LP+A G+L R G G V AKTG+L LAG +T Sbjct: 326 TAATDDKLHPVLRSLPVAYGSGTLAERFGGKD--GQGWVRAKTGTLDATSGLAGTVTGED 383 Query: 436 GQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 G F +G +D R L S L K Sbjct: 384 GSVYTFAFLSNG-----SDILAARESLDTLASALRK 414 >UniRef50_B8H9S3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=3 Tax=Arthrobacter RepID=B8H9S3_ARTCA Length = 509 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 100/464 (21%), Positives = 153/464 (32%), Gaps = 80/464 (17%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 +V AA VD + G + VQ D +PAS K++T++AAL Sbjct: 97 PAVLAARVDPLLQADGGGTFTGI-VQDALTGQVLFDRGGADGRVPASNMKLLTSVAALRA 155 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLK-----------RQDIRNMVAT-- 122 LGP+ F T + +V G D L R + + A Sbjct: 156 LGPEHTFATRVVAGPAANQ------VVLVGGGDVLLGPGESKPGEVMGRAGLTTLAAQTV 209 Query: 123 --LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 L+ +G + VL+D S+F P W D+ AP ++ Sbjct: 210 ASLQANGATG-EIKVLLDDSLFTGPALNPAWQEGDVAAGEVAPVYPLAMN---------- 258 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 V T PR AQ + G Sbjct: 259 ----------------SARYDPAVTTGPRPQDAAQSAAEEFASRLRAAGAAAGLAVAAGV 302 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 T E V+A QSA + + Sbjct: 303 ERSPGAGSTKP--------------------------TAGTERPEVLAEVQSATVASQVD 336 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 ++L++SDN +A+ + RM A PG+ + AV L Q AG+ G + D GL+ Sbjct: 337 LLLQESDNYLAEVMGRMASIADGG-PGSNDGATAAVSNQLAQ-AGIAAGPLTLVDVCGLA 394 Query: 361 RHNLIAPATMMQVLQYI--AQHDNELNFISMLPLAGYDGSLQYRAGLHQA-GVDGKVSAK 417 N ++ A +V++ I + P+AG G+L R G G V AK Sbjct: 395 MGNQVSAAQFAEVVRAITTGTDARLRAALDGFPVAGLTGTLDSRYGDESTVQGAGLVRAK 454 Query: 418 TGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIP 461 TG+L V L+G++ A G+ + F +G A + Sbjct: 455 TGTLNTVLALSGYVVDADGRLLVFSFIGNGLTPGAAGNKVALDR 498 >UniRef50_A7HML0 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Fervidobacterium nodosum Rt17-B1 RepID=A7HML0_FERNB Length = 395 Score = 221 bits (564), Expect = 3e-56, Method: Composition-based stats. Identities = 86/447 (19%), Positives = 166/447 (37%), Gaps = 87/447 (19%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 ++ P + + + Q + + Y+ + +PAS K+ + L A LGPDFR+TTT+ Sbjct: 32 SKAPLSSYVGVYFQDIENGNVLVQYNEHNLYVPASITKIFSTLVAWEVLGPDFRYTTTVY 91 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 + + G ++ + DP++ + +R + GV +I G+++ID S F++ Sbjct: 92 VPRGNISPTINGSIIIKGNGDPSMSVEILRENLKKFVYEGVKEIKGDIIIDNSFFSNERW 151 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPG---DMAFIRVASYYPVTMFSQV 204 GW W+ + A I+ N + + Y + + Y + ++ V Sbjct: 152 GIGWEWD----YKNPSIDALILKENTNTFNPYDENAVALNFGYNVVNILKEYGIKVYGNV 207 Query: 205 RTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELK 264 + + ++ + VP N ++ S YA IL+ Sbjct: 208 KVGKLNQSYREFIVIKSVPLS-NLISVANKYSSNS--------------YAEQILRTV-- 250 Query: 265 QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 G+ G LK+M +R + + Sbjct: 251 --GLRVYGYGNIYNS-------------------LKVMNDF---------YRKLFGEYYP 280 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE- 383 L G+ N + P ++ VL Y +++ Sbjct: 281 FR-------------LNDACGLSTKNVV-------------TPYMVVNVLSYAYKNEGGL 314 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 FIS L ++G +G+++ R G D AKTG+LQ V N+AG + T +G+++AF Sbjct: 315 SGFISTLAVSGKEGTMKNRLG------DIIAYAKTGTLQNVSNIAGIMITRTGRKVAFCI 368 Query: 444 YLSGYAVEPADQRNRRIPLVRFESRLY 470 ++ + + N ++R+ Y Sbjct: 369 MVNNFTIPTYVVTNYHDEIIRYVWNNY 395 >UniRef50_D2S5C3 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S5C3_9ACTO Length = 538 Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats. Identities = 97/489 (19%), Positives = 164/489 (33%), Gaps = 76/489 (15%) Query: 18 VQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLG 77 + AA A V + + + + AST K T LG Sbjct: 47 LPAAAAAIMSKPEFETARWLYSVAEAETGRVVLAGRAGESVFTASTAKNFTVGTTYATLG 106 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR------------------------ 113 D TT + GVL GDLV D + Sbjct: 107 TDATLTTPVYATAEPAGGVLAGDLVLVASGDLAMGGRGAMSGRVDHAFTAGTIDHVYGDI 166 Query: 114 ------------QDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFS 161 + ++ + SGV +I G+V+IDT ++ + D G Sbjct: 167 APNAAFVPDGPLAGLDDLARQVAGSGVTEIAGDVVIDTRLWNTFDGQEG----------- 215 Query: 162 APPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDV 221 P + V+ N +++ +A G A + + T + Sbjct: 216 -PAPSIYVNDNILDITV-TAAGIGQPAVLDLRPQTQAVTVESTVTTTDAGTPTSLT-VAA 272 Query: 222 VPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQ---- 277 PGD T++G + + L + + AS+A + + L +AG+T + + Sbjct: 273 DPGDPTSVTVSGTIAAGASQLTIH-RIPHAASWARTLFVEALGRAGVTVTSPAVGPNDQA 331 Query: 278 TQVNEPGTV----VASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGS 333 VAS S P+ +++L+ S N A+ + ++ G Sbjct: 332 GLPPAGSYPAEDRVASLTSPPMKAFGRMILETSYNTGANALMCLLAAH--GGSPDCLDGL 389 Query: 334 DAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLA 393 AV L +AGV + ++ DG G + P M+ ++ + F + P+ Sbjct: 390 QAVHSQL-DRAGVAPEDVVLFDGQGADPAS-TTPDQMVAWTRWAQRQPWGEEFAAGQPVL 447 Query: 394 GYDGSLQYRAGLHQAGVDGKVSAKTGS-----------LQGVYNLAGFITTASGQRMAFV 442 G G+L G+V+AKTG+ L V +LAG +TT G+R F Sbjct: 448 GVSGTLAS--TGQDDPAAGEVAAKTGTSVDVDPTTGRVLYKVQSLAGHLTTERGERFVFS 505 Query: 443 QYLSGYAVE 451 +SG Sbjct: 506 LSMSGATYP 514 >UniRef50_C8XA90 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8XA90_NAKMY Length = 466 Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats. Identities = 98/462 (21%), Positives = 166/462 (35%), Gaps = 91/462 (19%) Query: 18 VQAANVDEYITQL---PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 A ++ + PA A + ++ + + +S LPAST K++T A L Sbjct: 70 PSTAGLESQLAAQFANPALAQFSGVIIDPESGTVLWNQNSTAPQLPASTAKLLTGTALLT 129 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------------IRNMVAT 122 + P +F T + G +GD+V G D TL + + ++ A Sbjct: 130 SVDPTSKFVTKVV------KGDQEGDIVLVGGGDVTLSARADGVDTVYKGAPLMSDLAAQ 183 Query: 123 LKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAP 182 ++ SGV +++DT + D A GW Sbjct: 184 VRASGVE--VKRIVLDTDYWTGPDLADGW------------------------------- 210 Query: 183 KPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPL 242 + GD+ + +T S + A + Sbjct: 211 QTGDIRGTPTVAQGYITRMSPLMVDGDREDPANENSI----------------------- 247 Query: 243 PLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIM 302 D A+ AG L + Q +T E V+ S P+ LL Sbjct: 248 ----RTGDPATTAGKALARMIGQPDVTI-----VDGTAPEDAQVLGQVSSQPMSVLLAQA 298 Query: 303 LKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRH 362 L+ SDN++A+ + R + AR P ++ S A+ + L + +D + DGSGLS Sbjct: 299 LENSDNVLAEALARQVAIAR-GAPPSFDGASAAMLEAL-EDLKIDTIGIEMYDGSGLSTK 356 Query: 363 NLIAPATMMQVLQYIAQH--DNELNFISMLPLAGYDGSLQYRAGLHQAGV-DGKVSAKTG 419 + + P+ M QV+ + N ++ +P+AG GSL R + G V AKTG Sbjct: 357 DQVPPSVMGQVVALAVKGDPPALRNLLTGMPVAGVSGSLADRYQDDASRAGAGWVRAKTG 416 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIP 461 S+Q Y LAG++ + + F +G + + Sbjct: 417 SVQLTYALAGYVPDVDNRILVFAFVSNGVSSGTRPALDALAA 458 >UniRef50_UPI0001C30F2A D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C30F2A Length = 431 Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats. Identities = 93/437 (21%), Positives = 152/437 (34%), Gaps = 70/437 (16%) Query: 33 GANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNV 92 G V + + + +PAS +K+ T AL++ G D T + G + Sbjct: 40 GGVNGAYVLNMTTGSVLASVRADTARIPASVEKLYTTSTALLRYGADGTLDTRVLGSGAL 99 Query: 93 EN-GVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGW 151 E+ G +GDL R DPT Sbjct: 100 EDDGTWRGDLYLRGSGDPTFGSARYTQYA------------------------------- 128 Query: 152 PWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGS 211 A ++ S GD +F P Sbjct: 129 ------FGGGATVTDLAAAVAEAGITRVSGRVYGDESFFDSKRGGP-------------- 168 Query: 212 AEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWS 271 A DV G L + + L + A +A L L+Q+G+ Sbjct: 169 --ASSYGFDVWIGSPLTGLLYNRGLAKEDGSAL---QKQPALFAAQQLTTALRQSGVRV- 222 Query: 272 GTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRA 331 +AS S P+ L ++ L SDN++A+ + + +G A F G+ A Sbjct: 223 ARAASSGIAPTGAEQLASIPSLPMSTLARLTLVPSDNLLAEMLLKGVG-ASFGTAGSTAA 281 Query: 332 GSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLP 391 G+ R L + G+ +ADGSGLSR N +P ++Q+L + F S +P Sbjct: 282 GATVARSTL-SRFGISP---RLADGSGLSRANATSPRQVVQLLDGMRDQ---AGFRSGMP 334 Query: 392 LAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 +AG G+L R + AKTG+L V L G+ +++G ++AF + +V Sbjct: 335 VAGRSGTLMKR--VRGTIAQDNCQAKTGTLSNVSALGGYCRSSNGHQIAFAFMFN--SVS 390 Query: 452 PADQRNRRIPLVRFESR 468 + L++ +R Sbjct: 391 TYAAKAAEDRLMQLLAR 407 >UniRef50_A3Q701 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Corynebacterineae RepID=A3Q701_MYCSJ Length = 462 Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats. Identities = 105/450 (23%), Positives = 164/450 (36%), Gaps = 91/450 (20%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P LA V P D H+ PAST KV+TA AAL+ L + R TTT+ Sbjct: 82 PNLGELAGRVTDAMTGDPLWDRHADVPMQPASTNKVLTAAAALLTLDREARLTTTVVAGD 141 Query: 91 NVENGVLKGDLVARFGADPTLKRQ------------DIRNMVATLKKSGVNQIDGNVLID 138 + G +V + G DPTL I + +++SG+ V +D Sbjct: 142 QKRD---PGLVVLKGGGDPTLSAAPRGTDSWYRDAARIGELADQVRRSGIEPTA--VAVD 196 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 TS ++ P A P D+ +A PV Sbjct: 197 TSA------------------YTGPEMAF-------------GWDPLDIPGGDIAPMVPV 225 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 + ++ + A+ AG Sbjct: 226 MLD-----------------------GGRTQPVS----------EESRRSPTPAADAGRA 252 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 L L+ + G +A+ QS PL + L++M+ SDN++A+ + R + Sbjct: 253 LATALRID----PAAVTVLRGPYRGGRQIAAVQSPPLMERLRVMMNLSDNVMAEAIGREV 308 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 A+ P ++ + AV LR +AG+D + D SGLS + + T+ V+ A Sbjct: 309 A-AQLGRPQSFDDAAKAVLAQLR-KAGIDTTGARLFDSSGLSVDDRLTARTLDDVITAAA 366 Query: 379 --QHDNELNFISMLPLAGYDGSLQYRAGLHQAG--VDGKVSAKTGSLQGVYNLAGFITTA 434 H + +LP+AG G+L R AG G + AKTGSL G +LAG +T A Sbjct: 367 GDDHPELRPLVDLLPIAGGSGTLSNRYLDTAAGREAAGWLRAKTGSLTGTNSLAGIVTDA 426 Query: 435 SGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G+ + F + + +R Sbjct: 427 RGRVLTFALMSNNAGPTGRTALDALAATLR 456 >UniRef50_C0BK36 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Flavobacteria bacterium MS024-2A RepID=C0BK36_9BACT Length = 425 Score = 216 bits (550), Expect = 1e-54, Method: Composition-based stats. Identities = 88/475 (18%), Positives = 166/475 (34%), Gaps = 62/475 (13%) Query: 2 RFSRFIIGLTSCIAFSVQAANVDEYITQLPA--GANLALMVQKVGASAPAIDYHSQQMAL 59 F + ++S + + V + ++ A A++A+ + + + P Y + Sbjct: 5 LFIFLFVCVSSLWSQRLSEKRVGRQVQKIEAFQKAHVAISISPLEGATPMAQYQAAHYMT 64 Query: 60 PASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARF--GADPTLKRQDIR 117 PAS K++T LG +F + + + D + F P L + Sbjct: 65 PASNTKLLT------FLGASQQFK-----ELPAVSYFKEKDSIIHFKSTGYPLLFHPFYK 113 Query: 118 N--MVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + + A + G+ + +V D + GW W+D + ++A + + N Sbjct: 114 DTILDAFFNQKGLW--NYHVNKD----SPKPHGSGWAWDDYSYYYAAETSVFPIYGNTLQ 167 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 + + +F +T+ +A D N F Sbjct: 168 AQIDAKELKMSPSFFAS------------KTILDSLGKAFK-----RAYDRNTFHFNPAA 210 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 + L F D ++ L + I + + + L Sbjct: 211 WSAGDTLYRPFITSD------SLFVKLL-EHEIGQPVHVADGNSAEPQWNFLYTAAEETL 263 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 + L L+ SDN IA+ + MI FN T + + D Sbjct: 264 YSAL---LQDSDNGIAEALLLMISQKNFNG-MTPEKAIALLLDQWKPWL---PDPIAWVD 316 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 GSG+SR+N+I P T+++VLQ I + S P G+L+ + + Sbjct: 317 GSGISRYNMITPRTVVRVLQKIYETAGWQTIESYFPKGATSGTLKKYSNTA-------LY 369 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR-FESRL 469 AKTG+L+ +NL+G+ G+ F ++ + A+ R L+ FE +L Sbjct: 370 AKTGTLRHNHNLSGYWVHPKGKTYVFSIMVNHHTASTAEVREGIGTLLEWFERKL 424 >UniRef50_B1VHL4 Putative penicillin-binding protein 4 n=1 Tax=Corynebacterium urealyticum DSM 7109 RepID=B1VHL4_CORU7 Length = 458 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 94/470 (20%), Positives = 161/470 (34%), Gaps = 81/470 (17%) Query: 14 IAFSVQAANVDEY--ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + ++ E + L+ + + + + +PAS+ KV T A Sbjct: 57 ASPPATPVDLTEVKKAAKDRQLGRLSAEITDLETGEVIYANNEGKHLVPASSTKVYTTAA 116 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQI 131 AL+ GP R T++ G G+L+ D TL R+ Sbjct: 117 ALLAKGPQDRLATSVVKGGP-------GELILVGEGDITLARK----------------- 152 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 G+ + + + + A + + I Sbjct: 153 ---------------PGSGFFTD------APAISDLA---DQVR-RALPAEELKKITKIT 187 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 V + LD V D R T RS Sbjct: 188 VDNSMREKSTFHKSWDLVEIGMGNVTFLDSVMIDAGRIIPTENYSARSNT---------P 238 Query: 252 ASYAGAILKDELK--------QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIML 303 A L +++ + + S + + SAPL L+ M+ Sbjct: 239 ARDVAQALAEDMGLGEKLKSKKLKLEVSDDPVGPAHPTAE-EALGQVLSAPLSTRLRDMM 297 Query: 304 KKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHN 363 SDNM+A+ V R + ++ ++PGT++ ++ V ++L+ GVD ++ D SG+S N Sbjct: 298 LHSDNMLAEAVGREVAISQ-DLPGTFKGATEGVLKVLKDN-GVDTEGAVLHDTSGMSEDN 355 Query: 364 LIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAG--VDGKVSAKTGSL 421 ++ + L LP+AG +G+L+ R G V AKTG L Sbjct: 356 RLSAHNLNSAL----GSKKLHALQQDLPVAGAEGALRNRYLAGSGAEDAAGWVRAKTGFL 411 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 GV LAG + T SG+ ++F + PAD + R L R + +Y+ Sbjct: 412 DGVNALAGTVVTKSGRPLSFAFLSN----TPADVGDGREALDRLAAAVYR 457 >UniRef50_A1B1N0 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=1 Tax=Paracoccus denitrificans PD1222 RepID=A1B1N0_PARDP Length = 484 Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats. Identities = 80/443 (18%), Positives = 149/443 (33%), Gaps = 40/443 (9%) Query: 40 VQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKG 99 V + + + PAST K +TAL AL +LG RF T + GN Sbjct: 55 VIDPASGQVLAERQPEPSMAPASTLKAVTALYALDRLGERHRFATRVIRAGN-------- 106 Query: 100 DLVARFGADPTLKRQDIRNMVATLKKSGV---NQIDGNVLIDTSIFASHDKAPGWPWNDM 156 L+ G DP L + + A + P D Sbjct: 107 TLILAGGGDPVLDTDALDELAAAAVADEQAAGRPAPTAFAVWGGAL--PRIGRLDPAQDE 164 Query: 157 TQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQY 216 ++ + I++ N + K ++ + + T + + Sbjct: 165 HLPYNPSISGMILNFNRVHLDWRRGDKGYQLSL----QARGRKLSPRAYTTAIAAVDRGL 220 Query: 217 CELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR 276 G L +T+ +S V+ YAG + + + G+ + Sbjct: 221 PLFTYEAGKLESWTIARSSLGKSGSR--WLPVRRPELYAGDVFQTLCRARGLALPNPEVI 278 Query: 277 QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAV 336 + + G +A +S L +++ M++ S N+ A+ + A G A + A+ Sbjct: 279 E--ILPEGAEIARHESPDLRRIVRDMMEYSTNLTAEVIGLAASRA-----GDVGASAAAM 331 Query: 337 RQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYD 396 LR Q G+ G+ D SGLS N + + ++ + + + ++PL Sbjct: 332 ADWLRGQ-GIG-GDFAFHDHSGLSPLNRVNAGMLAALVAGPGRTRDLRGLMKLIPLRDAR 389 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQR 456 G + D ++ AKTG+L V NLAG+ G+ + F + A + Sbjct: 390 G--------KRKDSDIRIEAKTGTLNFVSNLAGYAQAPDGRELGFAILTADEDRRAASEG 441 Query: 457 NR----RIPLVRFESRLYKDIYQ 475 + L + + + Sbjct: 442 QELPEGVAGWTKRSKALQQALIE 464 >UniRef50_UPI0001B57B89 hypothetical protein StAA4_36716 n=1 Tax=Streptomyces sp. AA4 RepID=UPI0001B57B89 Length = 918 Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats. Identities = 96/451 (21%), Positives = 165/451 (36%), Gaps = 82/451 (18%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 A + L+ V + D+ S PAST K++T AAL+ + P R +T Sbjct: 535 AGAAALSQLSGSVIDPASGTVLWDHASNTPLTPASTTKILTVSAALLAMEPTKRISTK-- 592 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 + G G ++ G DP+L V D+ ++ Sbjct: 593 ----IVQGAQPGTVIIVGGGDPSLTAL-------------------PVGTDSPLY----- 624 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 P AA VD V GD+ +++ + + Sbjct: 625 ----------------PGAAHVDDLVNQVK----KAGGDVKKVQLDASAFSGPNTAPGWE 664 Query: 208 PRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAG 267 P + + D R + + + + ++ D+L Sbjct: 665 PSDAPSLYGAPIVPAMTDGGR---------GNPKVDETMRSGNPGTALTQLVADKL---- 711 Query: 268 ITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPG 327 + + E V+ QSAPL DL +L+ SDN++AD++ R + A Sbjct: 712 ---GASPAGPAKAPEGAKVLGEVQSAPLPDLAYALLQISDNVLADSLGRQVAMATGG-EA 767 Query: 328 TWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA-------QH 380 ++ S AV+++L G D+ + D SGLS N + + QVL A Sbjct: 768 SFAGASAAVKKVLADH-GFDVNGLQLFDTSGLSNQNKVPARLLAQVLAAAAGPDGKDPNT 826 Query: 381 DNELNFISMLPLAGY-DGSLQYRAGLHQA-GVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 ++ LP+AG +G+L R + G G V AKTG+L GV LAG++ + + Sbjct: 827 PKLRPLLAGLPVAGSPEGTLHGRYHSGETQGGKGWVRAKTGTLTGVNTLAGYVLDSDNRV 886 Query: 439 MAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 +AF +G +++ + + L + L Sbjct: 887 LAFAFMSNG-----SEKNSGQAALDVLATAL 912 >UniRef50_D1XTI9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=7 Tax=Streptomyces RepID=D1XTI9_9ACTO Length = 494 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 91/454 (20%), Positives = 145/454 (31%), Gaps = 79/454 (17%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 +A + + G A V + + PAST K+ T++AA Sbjct: 111 PVAAGALDTVLTPLLKAPGLGTVSAAAVVDTATGEQVYAHGATTPMTPASTVKIATSVAA 170 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQID 132 L LGPD R TT+ + G + G DPTL R +R + ++ + Sbjct: 171 LSALGPDHRIPTTVRVSKD------SGTVTLVGGGDPTLDRSALRALATDTARALRDGGT 224 Query: 133 GNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRV 192 V + D ++ + N + Sbjct: 225 EKVRLTY---------------DTSRYSGPALHPISPNEN-------------------I 250 Query: 193 ASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGA 252 A + + + + Sbjct: 251 APVSALMVDEGRLDGSDHGPAPRTADPARDAARA-------------------------- 284 Query: 253 SYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIAD 312 + L AG+ + VA+ S PL L++ L SDN IA+ Sbjct: 285 ------FAELLGDAGVPTRSDP-ASGRAGSGARTVATHLSKPLSALVERALTNSDNDIAE 337 Query: 313 TVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQ 372 + R P ++ G AV L+ GV + + DGSGL+R + + + Sbjct: 338 ALVRQTALK-AGEPASFAGGRRAVTNRLKG-LGVPVTGADLVDGSGLNRKDKVTAGLLTS 395 Query: 373 VLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGF 430 +L A H ++ LP+AG+ G+L R ++G G V AKTG+L GV LAG Sbjct: 396 LLALAADPDHPELRPVLTGLPVAGFSGTLGDRYS-AESGATGLVRAKTGTLTGVNALAGT 454 Query: 431 ITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 G+ +AF SG P + L Sbjct: 455 AVDPRGRLLAFAFLTSG-TTSPGEAEESLDALAT 487 >UniRef50_D0L4G7 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Gordonia bronchialis DSM 43247 RepID=D0L4G7_GORB4 Length = 465 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 95/464 (20%), Positives = 151/464 (32%), Gaps = 78/464 (16%) Query: 12 SCIAFSVQAANVDEYITQLPAGANLALM---VQKVGASAPAIDYHSQQMALPASTQKVIT 68 + A A V I L + + ++ +PAS KV+T Sbjct: 69 AANAPEPTPAGVTREIADELRDPALGALTGQISDAITGQVLWSRNAGTPRIPASNDKVLT 128 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGV 128 A AAL+ L D R TT++ G ++ + DPTL Q Sbjct: 129 AAAALLALPHDQRLTTSVVAG-------TNGQIILKGAGDPTLSAQP------------- 168 Query: 129 NQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSV-SLYSAPKPGDM 187 + + + + P + +D + F ++ S D+ Sbjct: 169 -------VGADTFYTDPGRIADLATQIRRS--GVPVRSVAIDLSAFEGPTMDSTWDRRDI 219 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFA 247 A +A + + + Sbjct: 220 AGGDIAPIESLMVDGARV---------------------------------EPLDEYSPR 246 Query: 248 VQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSD 307 AG L L G + + G V+AS QSAPL + ML+ SD Sbjct: 247 TPTPGLAAGRALAKAL-----DVDGDV-AEATAPVNGQVIASVQSAPLVTRVNDMLRYSD 300 Query: 308 NMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAP 367 N++A+T+ + + P T +G AVR L+Q T + D SGLS N + Sbjct: 301 NVLAETLSVELAVHQGLSP-TLESGVSAVRNTLQQTFAQQWEGTSLHDASGLSYANRVPA 359 Query: 368 ATMMQVLQYIA--QHDNELNFISMLPLA-GYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 + V+ + + LP+A G G+L R G V AKTG+L GV Sbjct: 360 ELLDVVMTAASGPAQPKMRPMLDGLPVAAGLAGTLSDRFDPRTNPGAGWVRAKTGTLTGV 419 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 +L G + T G+ ++F G PA R ++ Sbjct: 420 SSLTGIVQTVDGRVLSFAMMSGG--TSPAAARPALDAVIGQLRE 461 >UniRef50_D0LZE4 Peptidase S13 D-Ala-D-Ala carboxypeptidase C n=1 Tax=Haliangium ochraceum DSM 14365 RepID=D0LZE4_HALO1 Length = 627 Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats. Identities = 80/376 (21%), Positives = 139/376 (36%), Gaps = 21/376 (5%) Query: 28 TQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLE 87 + A+ + AP ++ PAS K+I+ AL LGP++R+ T L Sbjct: 92 QRYLRKGVTAIYIVDAKTGAPLFAAQEDELLNPASNVKLISTATALDALGPNWRYATRLI 151 Query: 88 TKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDK 147 G + GD+ DPTL+ DI + A L ++GV +IDG++++ + Sbjct: 152 GPAPDGEGAIAGDVYLLGSYDPTLRASDIWELAAGLGEAGVARIDGDIVVGSDALRDSLG 211 Query: 148 APGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTL 207 + + P V + + ++ TL Sbjct: 212 RIRATFRIRGERAGEAP----------EVRIDPGLDFLTDEVREQFLAETFELDNRAETL 261 Query: 208 PRGSAEAQYCELDVVPGDLN-RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 + + L R ++G + +R + Y G IL+ L QA Sbjct: 262 RARKRARMQVRVRMDEDALPYRVEVSGHVSKR-RRDKKRRRIPSPQLYTGQILRAALLQA 320 Query: 267 GITWSGTLLR---------QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRM 317 G+ SG + +A +S P+ L+ + K+S N +AD V Sbjct: 321 GVEVSGAVRVSELGVYTAQHAAAGSVPVELARHESKPISALVARINKRSLNALADRVLMT 380 Query: 318 IGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI 377 G A + P T G A+ LR AG+D ++ GSGLS ++ ++ VL+ Sbjct: 381 AGAALYGGPPTMENGVRAMHAWLRDHAGIDPAEVVLDTGSGLSYRTELSARHIVGVLRTA 440 Query: 378 AQHDNELNFISMLPLA 393 A + + ++ P Sbjct: 441 AGYRASEHPLAPQPRM 456 Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 7/99 (7%) Query: 375 QYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTA 434 + A E F+ L + G DG+L+ R V G+V KTG+L V L+G + Sbjct: 530 EAAAGSSLEQVFLHSLAVGGIDGTLRGRLR----PVRGQVHGKTGTLTRVIALSGIVEHG 585 Query: 435 SGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYKDI 473 Q +AF +G+ +R+ R + L+ + Sbjct: 586 D-QAVAFSLVTNGHTHR--KRRHVRRAHDKIVEALHDYL 621 >UniRef50_A4XCT3 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=4 Tax=Micromonosporaceae RepID=A4XCT3_SALTO Length = 593 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 102/462 (22%), Positives = 169/462 (36%), Gaps = 63/462 (13%) Query: 15 AFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALI 74 A + A +D + G + + V V + A D + +PAS K++TA L Sbjct: 182 AAAGVRAALDPLVNSAALGDRVNVSVTDVASGAILYDQGAADGTVPASVTKLVTAATVLA 241 Query: 75 QLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGN 134 P R T G G++V G DPTL Sbjct: 242 ARDPGHRIPTRAVA------GAAPGEVVLIGGGDPTLA---------------------- 273 Query: 135 VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVAS 194 +D + F P AA +D + + +A + V S Sbjct: 274 --VDGTGF--------------------YPGAARLDE--LAAQVKTALGGVAPTRVVVDS 309 Query: 195 YYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASY 254 + +E + + D R L + A V++ + Sbjct: 310 SLYSGPVHEPGWDDDILSEGYGAAITALMTDGARSDLEQAKRDHDDGRHAAKRVKEPDLH 369 Query: 255 AGAILKDELKQAGITW----SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 AGA L + PG+ + +S P+ L+ IM+ SDN++ Sbjct: 370 AGAAFAQLLGVPTGAVERGTAPEAGADATAGAPGSELGVVESLPMVRLVDIMISDSDNVV 429 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + R + AR P ++ ++++R + + G+ + +ADGSGLSR N I+P+ + Sbjct: 430 AEVLARQVALAR-GQPASFSGAAESMRAVAGE-LGLPVAALTLADGSGLSRANRISPSLL 487 Query: 371 MQVLQYIA--QHDNELNFISMLPLAGYDGSLQYRAGLHQAGV-DGKVSAKTGSLQGVYNL 427 +++ A LP+A + G+L R A G V AKTG+L GV+ + Sbjct: 488 TDLVRLAADGSRPELATLFGGLPVAAWSGTLTKRYTDVAAQAGAGMVRAKTGTLTGVHAI 547 Query: 428 AGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 AG +TTA G+ +AF R+ L R + L Sbjct: 548 AGLVTTADGRLLAFAVLTD--RAPDDGLTAARVALDRITAAL 587 >UniRef50_UPI0001C315E5 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Conexibacter woesei DSM 14684 RepID=UPI0001C315E5 Length = 458 Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats. Identities = 97/460 (21%), Positives = 159/460 (34%), Gaps = 76/460 (16%) Query: 9 GLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVIT 68 + + + + + I + P+ A V + D S ++ L AS K+ T Sbjct: 31 AVAAPSSEEQLRSTLAAQIAKGPSAA--GAYVVDLSDGRVVFDDRSDRLRLSASVTKLYT 88 Query: 69 ALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDI-----------R 117 ALI+LG D R TT + G GDL R D T Sbjct: 89 TSTALIELGSDTRLTTHVLGVGRRSGATWSGDLYLRGAGDFTFGTAAFARKAYGSDASVE 148 Query: 118 NMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVS 177 + A L++SG+ + G VL D S++ + + Sbjct: 149 RLAAELRRSGLRHVTGRVLGDASLYRDNG-----------------------------GT 179 Query: 178 LYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQ 237 + D F R Y G+ E P NR Sbjct: 180 EFPLVLCADPLFGRGCPY-----------GVAGAFERPIPNGPRTPIGFNR--------- 219 Query: 238 RSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHD 297 A + A++A + L L+ AGI G+ + +AS +S Sbjct: 220 GLRDATSAAPQRRPATFAASGLTRALRDAGIRVDGSA-GTARTPARARTLASTRSPAFAR 278 Query: 298 LLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGS 357 L ++ K SDN AD R++G G+ G+ V + + G+ I GS Sbjct: 279 LAALINKPSDNYAADATLRLVGARVAG-DGSRAGGARVVSRTIADTFGLAPA---IRSGS 334 Query: 358 GLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAK 417 G + + +P ++ +L+ + + F L AG DG+L+ +G+ K Sbjct: 335 GETLTDRTSPRQLVGLLRGMRERPEGRAFARSLSRAGRDGTLR---RFAGTVAEGRCQLK 391 Query: 418 TGS------LQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 G+ N+ G+ T+ SG+R AF L+G +E Sbjct: 392 DGTRVDAKQANSTLNMTGYCTSVSGKRFAFAVMLNGMRME 431 >UniRef50_C6WGG1 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-al anine-endopeptidase n=1 Tax=Actinosynnema mirum DSM 43827 RepID=C6WGG1_ACTMD Length = 1016 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 100/478 (20%), Positives = 165/478 (34%), Gaps = 108/478 (22%) Query: 15 AFSVQAANVDEYITQLPAGANLA---LMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 A + A V + A L V + +PAST K + A A Sbjct: 619 APAPTPAGVQAVLQGPLANGALGNLTGTVIDPASKTVLWHQGETTPLVPASTVKNLVAAA 678 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKR------------QDIRNM 119 AL+QL +FTT + G G +V G DPTL + + Sbjct: 679 ALLQLDHTTQFTTKVV------QGAEPGTVVLVGGGDPTLSSLPEGRSSVYPGAPTLDEL 732 Query: 120 VATLKKSG-VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 V +K SG + +++ ++ +SA P L Sbjct: 733 VEQVKASGPITEVEYDI----------------------SRYSAEPG------------L 758 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 P D+A + + P+ + +G Sbjct: 759 APGVDPNDVAAGFITNIGPLMLDGARSDPTKGDT-------------------------- 792 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 A A L D L G T G L + V+ +S PL L Sbjct: 793 -------PRTATPAPDAAKALADRL---GATVGGKTL----APQAAKVLGEVKSVPLDQL 838 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 ++ M++ SDN++A+T+ R + AR N ++ + AVR +L + G D+ I +D SG Sbjct: 839 IENMMQLSDNVLAETLAREVAKAR-NAETSYEGATKAVRDVLTEN-GFDLTGVITSDASG 896 Query: 359 LSRHNLIAPATMMQVLQYIAQHDN--------ELNFISMLPLAGYDGSLQYRAGLHQAGV 410 +S N + + +L A+ D ++ L +AG +G+L+ R Sbjct: 897 MSVQNKVPAKLLGDLLTAAARPDAATDPVTTRLRPLLTALAVAGGNGTLKERFA-QSPAG 955 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 G + KTG+L V++LAG + G+ + F +G + + R L Sbjct: 956 KGWIRGKTGTLTEVHSLAGVVVDTDGRLLVFAFMSNG-SGDALGARAGLDALAAQLRG 1012 >UniRef50_UPI0001B57936 hypothetical protein SSPB78_19386 n=1 Tax=Streptomyces sp. SPB78 RepID=UPI0001B57936 Length = 370 Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats. Identities = 100/422 (23%), Positives = 154/422 (36%), Gaps = 63/422 (14%) Query: 62 STQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD------ 115 S K+ TA+AAL LGPD R T +E G+ LV G DPTL + Sbjct: 1 SVTKIATAVAALDALGPDHRIRTRVEKDGHR--------LVLVGGGDPTLTARAHPGEYA 52 Query: 116 -IRNMVATLKKS-GVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNC 173 +R + ++ G ++ DTS +A + P P ++ AP I D Sbjct: 53 SLRTLARRTAEALGTEHGTYTLVYDTSRYAGTTRHPIGPNENL-----APVTPLIADEGR 107 Query: 174 FSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTG 233 S + G T P ++ +L G R + Sbjct: 108 LDSSDHGPAARG--------------------TDPALDTARRFHDLLAEAGVKLRDEVE- 146 Query: 234 CLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSA 293 + P A + + +AS SA Sbjct: 147 TGDGKKAPAEDPSGSPKPGDDAKGG------------QDAKGGKGGKDGKDGGIASVSSA 194 Query: 294 PLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTII 353 PL +++ ML SDN IA+ + R A ++ G+ AV L + G+ + +T Sbjct: 195 PLATIVERMLTYSDNDIAEHLARQTALAT-GATADFKGGARAVHDRL-DKLGLPVEDTSF 252 Query: 354 ADGSGLSRHNLIAPATMMQVLQYIAQ--HDNELNFISMLPLAGYDGSLQYRAGL-HQAGV 410 DGSGL R + + P + +L A+ ++ LP+AG+ G+L R H Sbjct: 253 HDGSGLDRADKLTPRLLTALLAEAARKDQPGLRPVLTGLPVAGFTGTLATRYTAEHNKAG 312 Query: 411 DGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLY 470 G V AKTG+L GV LAG + T SG+ + F D + L + + L Sbjct: 313 TGLVRAKTGTLTGVNTLAGTVVTRSGRLLGFAFMSHD----APDPMAAQAALDKMATALA 368 Query: 471 KD 472 + Sbjct: 369 ES 370 >UniRef50_C0W606 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Actinomyces urogenitalis DSM 15434 RepID=C0W606_9ACTO Length = 465 Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats. Identities = 103/469 (21%), Positives = 173/469 (36%), Gaps = 94/469 (20%) Query: 12 SCIAFSVQAANVDEYITQLPAG------ANLALMVQKVGASAPAIDYHSQQMALPASTQK 65 + V A V Q A A+ A+ + V +D+++ PAS+ K Sbjct: 62 LSASAPVPQAEVLAGYAQTLATDELVGTASTAVAIIDVATGQTLVDHNASTALTPASSNK 121 Query: 66 VITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARF-GADPTLK--RQDIRNMVA- 121 ++TA A+L LG D R TT+ + V GD++ DP + ++ Sbjct: 122 LLTAWASLSTLGADHRMTTSATFQDGTLTLVGGGDVLLAADAGDPDAVVGHAGLGDLARD 181 Query: 122 ---TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSL 178 L V + + +D ++F + Sbjct: 182 VAAKLADQAVTSVK--LALDDTLFTG-------------------------------ATF 208 Query: 179 YSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQR 238 + G+ A++ A P+ + Sbjct: 209 SPDWEAGNEAWV--APIQPLMIDVTSYGGTTA---------------------------- 238 Query: 239 SEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDL 298 QD A A L AGI+ G + R V E +V+AS SAPL ++ Sbjct: 239 --------YPQDPAMEAAQAFATALTAAGISIEGDITRSH-VAEGTSVIASVDSAPLSEI 289 Query: 299 LKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSG 358 L + LK SDN + + R++ A ++ + AV + L+ G D+ + + D SG Sbjct: 290 LAVSLKASDNTMTEVEGRVLAAAT-GHEASFAGAAQAVLERLKAD-GFDVSDVTMLDCSG 347 Query: 359 LSRHNLIAPATMMQVLQYIAQHDNE---LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 L+R + + + Q+L A D + I+ LP+AG DG+L R + G V Sbjct: 348 LARADRVPARLLAQILARAAGDDGGTVGRSLITALPVAGLDGTLHDR--FTEGAATGTVR 405 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 AKTGSL +L+G + T G+ +AF + G+ + R+ L + Sbjct: 406 AKTGSLDQTASLSGTVVTRQGRLLAFSVIVDGFEAGG--LYSARVALDQ 452 >UniRef50_C9LES6 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LES6_9BACT Length = 406 Score = 211 bits (536), Expect = 6e-53, Method: Composition-based stats. Identities = 90/438 (20%), Positives = 154/438 (35%), Gaps = 91/438 (20%) Query: 21 ANVDEYIT-QLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 VD +T +L + + L + + A + + + + Q+ PAS QKVITA+ AL QLG D Sbjct: 46 QRVDSLLTPELLTRSQVGLHIYDLTADSTILAFGADQLMRPASNQKVITAVTALSQLGTD 105 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDT 139 F F T+L +G++ + L+G++ + G DP D+ ++ L GV I G+V++D Sbjct: 106 FNFRTSLYGEGSINDSTLEGNIYIKGGFDPRFGHDDLWALIHALNARGVRAIAGDVILDL 165 Query: 140 SIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVT 199 S+ S GW W+D + P + + A + Sbjct: 166 SLKDSARLGWGWCWDDD----NPPLTPLLYN----------QRDNFTAALSAALKDAGIR 211 Query: 200 MFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAIL 259 + + S + + V +++ L Q YA A+ Sbjct: 212 LAGSLIEGRISSGASLW---TVRSHTIDQILLR-------------MMKQSDNLYAEALF 255 Query: 260 KDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIG 319 +G + A + + Sbjct: 256 YQLAAHSG-----------KAYAGRKQ------------------------AVAYIKELA 280 Query: 320 HARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQ 379 + P + D + +N +P + L+Y Sbjct: 281 RHQGLAPADFSFA--------------DGSGLSL--------YNYASPRLLTAFLRYAYT 318 Query: 380 HDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQR 438 H+ L+ LPLAG DG+L+ R + VSAKTG+L+GV L+G+ T +G Sbjct: 319 HEGIFLHLQPSLPLAGVDGTLRKR--MTSGPAYANVSAKTGTLEGVSTLSGYCTAPNGHT 376 Query: 439 MAFVQYLSGYAVEPADQR 456 + F G + R Sbjct: 377 LCFAIMNQGILRQSVAHR 394 >UniRef50_C7R121 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Micrococcineae RepID=C7R121_JONDD Length = 476 Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats. Identities = 103/474 (21%), Positives = 163/474 (34%), Gaps = 90/474 (18%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + + AA + + + G ++A++V P ++ + AS QK++T L Sbjct: 73 ITGDTIATLAAKLAK--NKDTLGPSVAVVVSDTFTGDPITAVNADTPIVAASVQKILTGL 130 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD--------------- 115 AA+ L P+ R +TT+ G L G D L Sbjct: 131 AAMDVLDPNSRISTTVVQAG-------NNTLYLVGGGDMMLAANTGDPDAVNGHAGMRNL 183 Query: 116 IRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFS 175 + A+LK +G I N+ +D S+F P W + ++A A VD Sbjct: 184 AEDTAASLKLTGRTTI--NLYLDDSLFTGSPTGP-WADDIPPLGYAAAVHAIGVD----- 235 Query: 176 VSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCL 235 + R +Y P L + + V R Sbjct: 236 -----------VGRQREGTYAPRYADPATHALTTFADHLTELGITVTNTPSRRV------ 278 Query: 236 PQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPL 295 D YA I + V+AS QSA + Sbjct: 279 -------------LDRDGYAATI-----------------------DDERVIASVQSATV 302 Query: 296 HDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIAD 355 +++ LK SDN I + + R++ R +PGT+ + AV Q L G+D + D Sbjct: 303 GEIVDYFLKTSDNTITEVMGRLVAVER-GLPGTFDGATTAVIQALT-TMGLDTTGVDLVD 360 Query: 356 GSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVS 415 SGL + + + + + + +AQ + + +A YDG+L R G V Sbjct: 361 CSGLGDTSTVTASLINEAINTMAQAPAYRQAVRGMAVAAYDGTLNDRYTNRN--GRGLVR 418 Query: 416 AKTGSLQGVYNLAGFITTASGQRMAFVQYLSG-YAVEPADQRNRRIPLVRFESR 468 AKTGSL GV LAG + T + + F P R V S Sbjct: 419 AKTGSLPGVTALAGTLLTLDDRTLTFTIIADDLPDGGPWAARQAMDAFVEQLSE 472 >UniRef50_C8RSC7 PBP4 family D-alanyl-D-alanine carboxypeptidase, serine-type n=2 Tax=Corynebacterium jeikeium RepID=C8RSC7_CORJE Length = 444 Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats. Identities = 98/441 (22%), Positives = 152/441 (34%), Gaps = 74/441 (16%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 PA L+ V V + PAS+ K+ TA AA++ L D R++T L Sbjct: 73 PALGVLSASVTDVETGEVLWAKDENRKLTPASSTKLYTAAAAILALDEDSRWSTDLLQDP 132 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + G L+ R D +L R F Sbjct: 133 DD-----PGRLILRSDGDVSLSRDG-----------------------DGFFTDAASVAE 164 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRG 210 + + +VD + S L++ Sbjct: 165 LAAKAKKKLGGQAVTSIVVDNSVRSGDLFNK-----------------------TWDSAD 201 Query: 211 SAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA-GIT 269 LD V D R RS + G L D L +T Sbjct: 202 IDGGNVANLDAVMLDAGRLNPYKSDSARS---------HNPGEDVGRALADALGADAEVT 252 Query: 270 WSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTW 329 + + T +AS QSAPL+ L+ ML SDN++A+ + R I ++ P T+ Sbjct: 253 VAKEV---TPSLSDQDPIASVQSAPLNVRLRDMLVHSDNIMAEAIGREIAKSQ-GEPHTF 308 Query: 330 RAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISM 389 + A +L++ G+D + + D SG+S N + + VL + + + M Sbjct: 309 EGATSATLDVLKEH-GIDTKDATLFDNSGMSEKNRLTAHELDGVL----SNKEVRDILDM 363 Query: 390 LPLAGYDGSLQYRAGLHQA--GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSG 447 LP+A +G+L+ R G G V AKTG+L GV LAG + T SG+ + F + Sbjct: 364 LPVASVEGTLEARYGSGSGSEDSAGWVRAKTGTLSGVNALAGTVMTDSGRALTFAFLSN- 422 Query: 448 YAVEPADQRNRRIPLVRFESR 468 +P R L Sbjct: 423 -ESDPNSARPALDRLANAVRS 442 >UniRef50_C1CXX7 Putative D-Ala-D-Ala carboxypeptidase n=1 Tax=Deinococcus deserti VCD115 RepID=C1CXX7_DEIDV Length = 486 Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats. Identities = 94/495 (18%), Positives = 166/495 (33%), Gaps = 98/495 (19%) Query: 17 SVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL-IQ 75 +A V + +P ++ ++V+ G+ ++ +PAST K+ITA + L + Sbjct: 49 PALSAGVRLALKDVPQDVSVGVLVRDAGSGQVLEALRDRESFIPASTVKLITASSVLAER 108 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----IRNMVATLKKSGVNQI 131 G ++T L + R DPTL ++ +R++ G+ ++ Sbjct: 109 GGAQGYWSTDLTIPAVQVGRSHAKTVTLRGSGDPTLSVRNGSYSLRSLARQAYARGLRKV 168 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 + D ++ + P + SA + Sbjct: 169 GEVRVADGTL---------DVDSWQGVSLGVPMTGLRLADWHDDPPAASAEARSRLGAAL 219 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 +A + + + + Y + +P P Sbjct: 220 IAELRQAGVRVVSDRVRQAARSRPYVPPTRLDDQGRALPPDPQVPVSRRP---------- 269 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 + GI AS +SA + +L L+ SDN+ A Sbjct: 270 -------------EQGI-------------------ASVRSASVAGVLARTLRPSDNLRA 297 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 + + + R GT + R +LR + G D+ ++ADGSGLSR N + P + Sbjct: 298 EELLATLAV-RPQGTGTLQDALARERAMLR-RTGADLSGVVLADGSGLSRKNRLTPRALA 355 Query: 372 QVLQYIAQHDNELN-------------------------FISMLPLAG----------YD 396 Q+L+ + F+ LP AG Sbjct: 356 QLLKVMHDLPYPNRAGLRQLQLLPQRGLPERLYRSRQNVFVEALPQAGTGENVPGHDGRG 415 Query: 397 GSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA-DQ 455 G+L R V AKTG+L GV LAG++T SG+ + FV ++G P Sbjct: 416 GTLALRLQDEGLD----VRAKTGTLPGVSALAGYVTARSGRILVFVVLMNGPESSPILTL 471 Query: 456 RNRRIPLVRFESRLY 470 R+ + LV+ + Y Sbjct: 472 RDAQDRLVQALAAAY 486 >UniRef50_C5V8S4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Corynebacterium matruchotii RepID=C5V8S4_9CORY Length = 420 Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats. Identities = 84/451 (18%), Positives = 157/451 (34%), Gaps = 95/451 (21%) Query: 21 ANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDF 80 AN+ + ++ + V + + Q LPAS+ KV+T AAL++L D Sbjct: 61 ANLAPMLDDA-RLGKASIQFRDVTTGNVVLAKNPQLPLLPASSTKVLTVSAALLKLDLDD 119 Query: 81 RFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKS--GVNQIDGNVLID 138 R TT + G+ V + D + + I+++ ++K+ GV Q+ ID Sbjct: 120 RITTRVVQSGSDIA-------VIKAAGDVWMTYETIKDLAEQIRKNLPGVKQVQ----ID 168 Query: 139 TSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPV 198 TS + + W ++T+ F A P Sbjct: 169 TSAWTAPSFIESWGRENITEGFIA-------------------------------PMEPA 197 Query: 199 TMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAI 258 ++ R +G +P+ + P A + Sbjct: 198 MIYGARLNGAR----------------------SGDVPRSNTP-------------ALDV 222 Query: 259 LKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMI 318 ++ G+T E +A +S L + ++ +++ SDN++A+ V R + Sbjct: 223 AGAVARELGVTAFSKAEGTVPAGEGVKELAKVESPTLRERIEKLMETSDNVMAEAVGREL 282 Query: 319 GHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIA 378 + +IL + + I D SG+S+ N I + ++ A Sbjct: 283 ---------SGSDPVGETLRILGEHFQIPAD-LKIFDNSGMSKANRIPAEFLDSLMFAAA 332 Query: 379 QHDN-ELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQ 437 + ++ ++ LP+A G+L+ R G V AKTG+L L G I + SG+ Sbjct: 333 KDNSRLSAILATLPVAAGTGTLESRY--TTLRGRGYVRAKTGTLTDTSALVGTILSESGR 390 Query: 438 RMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 F + + R+ L Sbjct: 391 VYTFAIISND--APILEARSAMDELASAVRS 419 >UniRef50_A9WUR8 D-alanyl-meso-diaminopimelate endopeptidase n=1 Tax=Renibacterium salmoninarum ATCC 33209 RepID=A9WUR8_RENSM Length = 475 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 99/474 (20%), Positives = 163/474 (34%), Gaps = 87/474 (18%) Query: 7 IIGLTSCIAFSVQAANVDEYITQLP--AGANLALMVQKVGASAPAIDYHSQQMALPASTQ 64 + G A V AA + + + N V + A D S+ ++PAS Sbjct: 59 LAGSLKPDAAKVDAAKLGPLLDSILVSDQGNFTAQVLDAASGAVLFDRKSEAPSIPASNL 118 Query: 65 KVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV---- 120 K++TA A L LG D R T + G G +V R G D L + Sbjct: 119 KLLTAAAVLKNLGADSRLETKVFR------GTEPGTIVLRAGGDSLLAAGESVAGAVNGH 172 Query: 121 ---ATLKKSGVNQIDG-------NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVD 170 ATL + V + G V+ID SIF P W Sbjct: 173 AGLATLAQRVVAALAGSAGPAPLRVIIDDSIFTGPALNPAW------------------- 213 Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 PGD+A +A +P+ + S + + + + Sbjct: 214 ------------DPGDVAVGEIAPIFPLAVNSARADVKSVAGRPKDSAFASAQAFAAALS 261 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 G L + + T + V+AS Sbjct: 262 QAG-----------------------------LPASVDSVRAAGADLTLNDTTKNVLASV 292 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 QSA + + + ML+ SDN +A+ + RM ++ G+ AV + + G+ Sbjct: 293 QSATIAEQVGYMLQNSDNFVAEVLARMSAISQ-QKSGSSDDSI-AVTESTVKGLGLATEG 350 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNE--LNFISMLPLAGYDGSLQYRAGLHQA 408 I D GL+ + ++ A + QV++ + Q + + LP+AG G+L+ R G Sbjct: 351 LKIFDNCGLAPADRVSAALLGQVMRLMTQGPDANVRRAVDGLPIAGLSGTLENRYGTAAT 410 Query: 409 -GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIP 461 G + AKTG+L V L G++ G+ + F + + A + Sbjct: 411 SNAAGLIRAKTGTLNTVMTLTGYVVDLDGRLLIFSLMANDFNAGSAAAQPLLDK 464 >UniRef50_Q0FY12 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=3 Tax=Aurantimonadaceae RepID=Q0FY12_9RHIZ Length = 396 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 91/452 (20%), Positives = 154/452 (34%), Gaps = 70/452 (15%) Query: 1 MRFSRFIIGLTSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALP 60 M + + +A +A D P+G ++V + ++ + +P Sbjct: 1 MFQLIAFVFALALLAAPAKADTADGIAAMAPSGL---VLVLD-EDGEDLVAQNTDEAFVP 56 Query: 61 ASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMV 120 AS K++TA A+ LG D+RF T + L R G DP L ++ + Sbjct: 57 ASVAKLVTAWLAMEVLGGDYRFKTKFYMDEDRV-------LYVRGGGDPFLVSEEFALLA 109 Query: 121 ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYS 180 L S + V++D S F + PG D Sbjct: 110 PKLVDSVGEEPLKRVVLDASYFPDDLQIPGIEATDEAYD--------------------- 148 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 A++ + + T+ + L + + G + E Sbjct: 149 -----ARNAAFAANFNTIHAERRGSTVRSAEEQTPITPLAIEQFLAHGPAGRGRISLAQE 203 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK-QSAPLHDLL 299 + YAG +L +++AG G L V + V QS PL +++ Sbjct: 204 DPKVGL------LYAGELLIAFIERAGGDVEGE-LTTGSVPDELKPVYVHEQSRPLSEIV 256 Query: 300 KIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGL 359 ML S+N IA+ +F +G R P + D ++ L + +D + +GSG+ Sbjct: 257 GQMLLGSNNYIANQLFLEVGAHRRGSPVSLEKSLDVAQEELAELELID--AIQLVEGSGI 314 Query: 360 SRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 SR N + +L H L R+ + KTG Sbjct: 315 SRDNRFTARGLAVLLDDFRPHAELL-----------------RSTRAGS------RYKTG 351 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVE 451 + GV LAGF T++ FV L+G + Sbjct: 352 TFSGVRTLAGFARTSNHGDALFVISLTGNTGK 383 >UniRef50_C2CX37 Possible D-alanyl-D-alanine carboxypeptidase (Penicillin-binding protein 4) n=1 Tax=Gardnerella vaginalis ATCC 14019 RepID=C2CX37_GARVA Length = 594 Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats. Identities = 94/482 (19%), Positives = 161/482 (33%), Gaps = 69/482 (14%) Query: 17 SVQAANVDEYITQ----LPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 V ++ ++ + + G N + ++ + PAST K +TALAA Sbjct: 150 PVDKSSAEKILKEFFEYPGLGPNASAVIADAN-GKIIAAKNENLALQPASTMKTLTALAA 208 Query: 73 LIQLGPDFRFTTTLETK--------GNVENGVLKG--DLVARFGADPTLK---------- 112 L +TT+ + +GV G LV G D + Sbjct: 209 SHVLDMGSTLSTTVYANYVGSSRNADSAVSGVKNGFARLVLHGGGDMLMGAATNDPNHVN 268 Query: 113 -RQDIRNMV----ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAA 167 R + + +LKK GV ++ + +D S+F ND F AP ++ Sbjct: 269 GRAGLETLASNTVNSLKKQGVKVVE--LAVDDSLFGEKRYPDLIHENDEEGRFYAPTSSL 326 Query: 168 IVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLN 227 VD D + + ++ D Sbjct: 327 AVDEGRDRNFAAWVAAGNDADDPDDYPLLDRHPAVSTGLIFANLLKKFGIDVRTWSTDSA 386 Query: 228 RFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVV 287 + T + S + R+ ++ + Sbjct: 387 KIGKTSKIDGLSSIYVSS------------------------------RKPMISSDFKQI 416 Query: 288 ASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVD 347 A SAPL++++ ML+ SDN IA+ R+ A + +DAVR +LR GVD Sbjct: 417 ARVSSAPLNEIMAYMLRHSDNSIAEEFGRLTALAMRKS-NSPEGATDAVRDVLRD-LGVD 474 Query: 348 IGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQ 407 I ++D SGLS + + T++QV + L L G + R L Sbjct: 475 INGLHMSDCSGLSPKSAVRAVTLVQVQAQNLKIGKGAAAAEGLALPGVWCT-SARHRLSD 533 Query: 408 AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFES 467 G + KTG L V ++ G ++ SG + F ++ P D + + + + Sbjct: 534 PSAAGLLRVKTGFLGDVSSMVGNVSRKSGGALTFAVVVN----PPGDVNYTYVGINKMMA 589 Query: 468 RL 469 L Sbjct: 590 EL 591 >UniRef50_D2S792 D-alanyl-D-alaninecarboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2S792_9ACTO Length = 487 Score = 205 bits (521), Expect = 3e-51, Method: Composition-based stats. Identities = 105/455 (23%), Positives = 166/455 (36%), Gaps = 70/455 (15%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 +V A + + G + V V A +D S + PAST K++TA+AAL Sbjct: 97 AAVLADELAPLLASPALGPGVEARVVDVAAGEVLLDQDSDVPSTPASTAKLLTAVAALTT 156 Query: 76 LGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNV 135 LGPD TT+ G G++V G DPTL R Sbjct: 157 LGPDTTLETTVVA------GSAPGEVVLVGGGDPTLSR---------------------- 188 Query: 136 LIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASY 195 T P A V V S P + + + + Sbjct: 189 ---------------------TVPSLTYPGAPTVADLAAQVR-GSLPAGTRVTRVVIDNS 226 Query: 196 YPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYA 255 + P + + D R +G LP+ + A Sbjct: 227 LFQGPLTASGWGPGDAPSTYAAPVTATAVDGARVR-SGDLPRSGA----------PGTDA 275 Query: 256 GAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVF 315 G L L + + + S +SAP+ L++ L +SDN++ +++ Sbjct: 276 GTALAVALG-----VPDATVVLGNAPQGAQTLGSVRSAPVARLVEQALSQSDNLLTESLA 330 Query: 316 RMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQ 375 R + AR ++P T+ ++AV L AG+D+ ++DGSGLS + + + ++ Sbjct: 331 RHVALAR-DLPATFEGAAEAVTGALTD-AGLDVTGVSLSDGSGLSTTDRVPVELLTELFT 388 Query: 376 YIAQH--DNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITT 433 A +S LP+AGYDG+L R A G V AKTG+L GV+ LAG + T Sbjct: 389 GAADGTLPGTSAVLSGLPVAGYDGTLFDRGDADPATAPGSVRAKTGTLLGVHGLAGTVVT 448 Query: 434 ASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESR 468 A G+ + F G + + + Sbjct: 449 AEGRLLVFGVVADGAPANGEAAEDALDAVASALAA 483 >UniRef50_C9NA46 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=5 Tax=Streptomyces RepID=C9NA46_9ACTO Length = 489 Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats. Identities = 83/446 (18%), Positives = 138/446 (30%), Gaps = 78/446 (17%) Query: 11 TSCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITAL 70 + S +D + + G+ +V + PAST K+ T + Sbjct: 104 LTPAGASSLRTALDPLLDKPALGSVRTAVVIDAATGKQLFARGAATPMTPASTVKIATTV 163 Query: 71 AALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQ 130 A L LGP R TT+ + L G DPTL + +R++ A Sbjct: 164 AVLSALGPAHRIATTVALSPDSR------TLTLVGGGDPTLDKAALRSLAADAA------ 211 Query: 131 IDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFI 190 P D + + N Sbjct: 212 ---------RALPDGGTGPVRLTYDTSLYSGPARHPIGPNEN------------------ 244 Query: 191 RVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQD 250 +A + + + + Sbjct: 245 -IAPVSALMVDEGRLDGSDRGPAPRSGDPAADAARAFA---------------------- 281 Query: 251 GASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMI 310 D L AG+ + + VA+ S PL L++ + SDN I Sbjct: 282 ----------DLLGDAGVATRSAP-ASGRAVKGSRTVATHWSKPLSALVERAMTNSDNDI 330 Query: 311 ADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATM 370 A+ + R P ++ A L+ + G+ + +ADGSGL R + ++ + Sbjct: 331 AEALIRQTALK-AGEPASFAGSRRATTAELK-RLGMPLTGARLADGSGLDRADRVSAGLL 388 Query: 371 MQVLQYI--AQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLA 428 ++L H ++ LP+AG+ G+L R + G + AKTG+L GV +LA Sbjct: 389 ARLLALAADRDHPELRPVLTGLPVAGFSGTLGDRYTAT-SPATGLIRAKTGTLTGVNSLA 447 Query: 429 GFITTASGQRMAFVQYLSGYAVEPAD 454 G A G+ +AF SG Sbjct: 448 GTAVDAQGRLLAFAFLASGTTSPAEA 473 >UniRef50_B3DR07 D-alanyl-D-alanine carboxypeptidase n=11 Tax=Bifidobacterium RepID=B3DR07_BIFLD Length = 496 Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats. Identities = 97/477 (20%), Positives = 167/477 (35%), Gaps = 89/477 (18%) Query: 13 CIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAA 72 I + +A V+E ++ G + +++++ A ++ S PAST K +TALAA Sbjct: 86 AIDSTAASALVNELLSAQGVGNDTSVIIEDAQ-GTVAAEHESNTPREPASTLKTLTALAA 144 Query: 73 LIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD-----------IRNMV- 120 L T + + + L + D L D + + Sbjct: 145 SSTLNMASTLDTQVFLTQSDDG---TNTLTLKGNGDMLLSAGDSDANHTNGRAGLNTLAK 201 Query: 121 ---ATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWN-----DMTQCFSAPPAAAIVDRN 172 A L + G+ + N+ D ++F G D T F P ++ +D Sbjct: 202 ATVAALAQRGITSV--NLEYDDTLFGDSRIPAGLSEGGAVLSDYTVYF-TPVSSMAIDGG 258 Query: 173 CFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLT 232 + AP Sbjct: 259 RQYTADTPAPA------------------------------------------------- 269 Query: 233 GCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQS 292 P S P Q AS + L+ G+ +G + T +AS S Sbjct: 270 --DPDDSAGYPEL--SQHTASDVATKFAELLQSNGVAVTGDV-TANTAPSGETPLASVSS 324 Query: 293 APLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTI 352 A L +++ L+ SDN +A+ R+ A+ + G++AV+ L G+D Sbjct: 325 ATLSEIMAYTLRHSDNTLAEEFGRLTALAKS-ATNSPEGGTEAVKSTLND-LGLDTSGLT 382 Query: 353 IADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDG 412 +AD SGLS + + T+ V Q ++ L +AG G+ Q R V G Sbjct: 383 MADCSGLSPGSRLIVRTLAAVQQRNLTTESGAAGAEGLSIAGLVGTAQDRY--TDDAVAG 440 Query: 413 KVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 + KTGSL V ++AG ++ +G ++F ++ P D R + F ++L Sbjct: 441 LLRVKTGSLGTVTSMAGNVSRTNGGALSFAVVVNN----PEDYAAARSAIDSFITKL 493 >UniRef50_D2RBZ9 Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Gardnerella vaginalis 409-05 RepID=D2RBZ9_GARVA Length = 596 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 85/472 (18%), Positives = 166/472 (35%), Gaps = 46/472 (9%) Query: 23 VDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRF 82 ++E ++ ++ + ++ + + PAST K +TA A L Sbjct: 147 INELVSDASMSSSTSAVIMDAN-GRVVASHEPNALREPASTLKTLTASVASRTLDMGSTL 205 Query: 83 TTTLET---KGNVENGVLKGD---LVARFGADPTLK-----------RQDIRNMVA---- 121 T + G + + LV R D L R + + Sbjct: 206 DTQVFLLPKTGGIPERASSTNARKLVLRGNGDMLLGVGENDWHHVNGRAGLTTLARRTAN 265 Query: 122 TLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCF-SVSLYS 180 LK ++ + + +D S+F + D+ + F A ++ +D +S+ Sbjct: 266 ALKLENIHTVS--LAVDDSLFGAKRAPDLIYETDVERRFYAQTSSLAIDDARQRDLSVQG 323 Query: 181 APKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSE 240 F + +++ L + D + +G + Sbjct: 324 VDADAMTDFPLSDPHPALSVGHVFAKLLSKQGIVISNYSNKTASDEKK---SGSGSSADD 380 Query: 241 PLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLK 300 P ++ A + + I S Q+ ++ ++A SAPL++++ Sbjct: 381 PSENNKDSENENKSAQS------ENLVIPVSE---TQSLISSNSRLIAQVSSAPLNEIMA 431 Query: 301 IMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLS 360 L+ SDN +A+ R+ A + AV++ LR + +DI ++D SGLS Sbjct: 432 YTLRISDNTLAEEFGRLTALATHKS-NSPEGAVQAVKEGLR-KLNIDIRGLHMSDCSGLS 489 Query: 361 RHNLIAPATMMQVLQY-IAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTG 419 + + T+ QV I L L G G+ + R + G + KTG Sbjct: 490 PKSRLRATTLAQVQVLNIKADSGGAAAAEGLSLPGLVGTARKRLADESS--AGMLRVKTG 547 Query: 420 SLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRLYK 471 SL V ++ G ++ +G + F + PAD + + +F + L K Sbjct: 548 SLSEVTSMVGNVSRKNGGVLTFAVVANQ----PADIWGAFVAINKFMAELPK 595 >UniRef50_A6W5C7 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=2 Tax=Actinomycetales RepID=A6W5C7_KINRD Length = 478 Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats. Identities = 107/468 (22%), Positives = 164/468 (35%), Gaps = 84/468 (17%) Query: 16 FSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQ 75 + V + GA+++ V + + PAS K++TA+AAL Sbjct: 75 PAALGGVVAPLLADPALGASVSTSVVDALTGETLLATAADVPRTPASVAKLLTAVAALHT 134 Query: 76 LGPDFRFTTTLETKGNVENGVL--KGDLVAR-FGADPTLKRQDIRNMVATLKKSGVNQID 132 LGP R TT++ + VL GD++ DP + Sbjct: 135 LGPTSRATTSVVDGATPDEVVLVAGGDVLLAAGAGDPDAVDGHAGLDDLAAATAAELLAA 194 Query: 133 GN----VLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMA 188 G V +D + F +PG GD+A Sbjct: 195 GRTAVAVRLDDASFTGPATSPG-------------------------------WGSGDVA 223 Query: 189 FIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAV 248 V P+ + G L + A Sbjct: 224 AGFVMPVAPLAVD------------------------------EGRLAEG----ETAPRT 249 Query: 249 QDGASYAGAILKDELKQAGITW----SGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 D A A L G+ +G ++R V +AS +SA + +++ML Sbjct: 250 GDPALAAARTFAAALAAHGVQVLDQGAGPVVRAAAVP-GAATLASVESATTAEQVELMLT 308 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 SDN +A+ + R + A + P T+ S AV + GVD+ T + GSGL R Sbjct: 309 ASDNTLAEVLTRRVALA-ADRPATFDDASRAVVDQVAA-LGVDVTGTSLQGGSGLGRATR 366 Query: 365 IAPATMMQVLQYIA--QHDNELNFISMLPLAGYDGSLQYRAGLHQAG-VDGKVSAKTGSL 421 + + VL +A +H + LP+AG G+L R + G V AKTG+L Sbjct: 367 VPARVVTDVLTLVAGGEHPELGAAAAGLPVAGVSGTLLERYAEPGSASAAGVVRAKTGTL 426 Query: 422 QGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 GV +LAG++ A G+ +AF G A P R RF + L Sbjct: 427 TGVSSLAGYVRDADGRLLAFAVMSDGVA--PGASLAARRAQDRFAAAL 472 >UniRef50_B2GGG4 Putative D-alanyl-D-alanine carboxypeptidase n=1 Tax=Kocuria rhizophila DC2201 RepID=B2GGG4_KOCRD Length = 522 Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats. Identities = 97/443 (21%), Positives = 160/443 (36%), Gaps = 72/443 (16%) Query: 32 AGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGN 91 A + V ++GA P + +PAS QK+++ALA +G R TT+ + G Sbjct: 134 APGVVTAAVGELGADGPVAGREQARPVVPASNQKLLSALAVAEHVGAQDRLVTTVVSGGP 193 Query: 92 VE-NGVLKGDLVAR-FGADPTLKRQDI------RNMVATLKKSGVNQIDG--NVLIDTSI 141 V GD + DP R L++ + + G V +DTS+ Sbjct: 194 GALTLVAGGDTMLAPGQGDPAAVNGHAGLGTLARRTARALEQRSPDGVPGAVEVTVDTSL 253 Query: 142 FASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMF 201 FA D P W D +A ++ P+ ++ Sbjct: 254 FAGPDLNPAWEKED-------------------------------VASGEISRVAPIALY 282 Query: 202 SQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKD 261 S G+ +P D A A A Sbjct: 283 SHRVPAADGT----------------------------DPGDRGRRPADPAGEALAEFSR 314 Query: 262 ELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHA 321 +L++ + T + E T +A +SAP+H+ ML SDN +A+T+ R + A Sbjct: 315 QLQKELGDAAVTARGTARAPEGATELARVESAPVHEQSAYMLAHSDNSLAETLTR-VAAA 373 Query: 322 RFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHD 381 R + D + LR+ G+D + D SG++ N + AT+ + + + Sbjct: 374 RSGREASVAGVQDLLPAALREH-GIDTSGLRVLDASGMAPGNRVTAATLARAVDTLLTEP 432 Query: 382 NELNFISMLPLAGYDGSLQYRAGLHQ-AGVDGKVSAKTGSLQGVYNLAGFITTASGQRMA 440 + LP+AG G+L R G AKTG+L V L+G++ G + Sbjct: 433 RFGPYGRGLPVAGGTGTLAERFDDPAEQPARGVARAKTGTLLDVVALSGYVQREDGAVLV 492 Query: 441 FVQYLSGYAVEPADQRNRRIPLV 463 + L+G A ++R V Sbjct: 493 YAVVLNGVTGHTARAKDRVDRTV 515 >UniRef50_Q1J234 Peptidase S13, D-Ala-D-Ala carboxypeptidase C n=2 Tax=Deinococcus RepID=Q1J234_DEIGD Length = 473 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 98/483 (20%), Positives = 159/483 (32%), Gaps = 90/483 (18%) Query: 19 QAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAAL-IQLG 77 +A V +T+LP G + L+V+ + + +PAS K++TA + L + G Sbjct: 46 LSAGVQRALTRLPEGVRVGLLVRDLTTGELLEAREADLPLIPASNMKLVTAASVLLDRGG 105 Query: 78 PDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD----IRNMVATLKKSGVNQIDG 133 ++T L L R ADPTL D ++ + + GV ++ G Sbjct: 106 VGGWWSTELTLPAAEVGRASVSHLTLRGDADPTLTAVDGPNSLQALARQVHARGVREV-G 164 Query: 134 NVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVA 193 V +D S + P A ++ + P A R Sbjct: 165 AVWVDESRLDAATW--------RGLALGVPMTA-------VRLAEWHDDPPASAAEARAR 209 Query: 194 SYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGAS 253 + + + S R G L D Sbjct: 210 VGAALIRELRRAGVRVRSDAVIPAPPFRPYTPPPRRDERGHL-----------LPPDPF- 257 Query: 254 YAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADT 313 + + + E VAS +S +L L+ SDN+ A+ Sbjct: 258 --------------------IPPEHRPEEG---VASVRSGSPFGVLAATLRPSDNLRAEE 294 Query: 314 VFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQV 373 + + GT R +LR + VD+ + DGSGLSR N + ++Q+ Sbjct: 295 LLATLAVRPSG-NGTLPGALARERGVLR-RLDVDLTGIRLVDGSGLSRENRLTVRALVQL 352 Query: 374 LQYIAQHDN-----------------ELNFISMLPLAG----------YDGSLQYRAGLH 406 L+ + + LP AG G+L R Sbjct: 353 LKVMYDLPYPTGTPQAELPSRTYRDRRNAYAEALPQAGTGENVPAHDGRGGTLALRLMGS 412 Query: 407 QAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPA-DQRNRRIPLVRF 465 V AKTG+L GV +LAG++T SG +AF ++G P R + +VR Sbjct: 413 GLD----VRAKTGTLPGVSSLAGYVTGRSGHPLAFALLMNGPEDSPILTLRAIQDEVVRA 468 Query: 466 ESR 468 + Sbjct: 469 VAA 471 >UniRef50_B8DWB9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=6 Tax=Bifidobacterium RepID=B8DWB9_BIFA0 Length = 481 Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats. Identities = 95/465 (20%), Positives = 160/465 (34%), Gaps = 84/465 (18%) Query: 20 AANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPD 79 A +D + G +++ ++ + D+ + PAST K +T+LAA L Sbjct: 83 AKLIDALRAKNGVGPDVSAIIMQAD-GTVVADHAADVAREPASTMKTLTSLAAASVLDMG 141 Query: 80 FRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQD---------------IRNMVATLK 124 T + +V + D L D +N LK Sbjct: 142 DTLPTQTFLLQAEQG---TDTVVIKGNGDMLLGAGDSDPDHVNGRAGLLTLAKNTAHALK 198 Query: 125 KSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKP 184 + GV ++ N+ D S+F Sbjct: 199 QRGVTKV--NLQYDDSLF-----------------------------------------G 215 Query: 185 GDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPL 244 D + + P +++ + Q+ + D + P S Sbjct: 216 ADRTPTGIEANNPDSLYYTPVSSMAIDGGRQWNGANPRNPD-----VFESYPALS----- 265 Query: 245 AFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLK 304 Q+ A+ AI ++ L GIT QT V+ T +A +SAPL ++ ML+ Sbjct: 266 ----QNTAADVTAIFRNLLGAQGITIVNAEPTQTTVSADRTPIAEVESAPLAMVMAFMLR 321 Query: 305 KSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNL 364 SDN +A+ R++ + + + AVR LR G+D+ +AD SGL+ + Sbjct: 322 HSDNTLAEEFGRLLALSTKQ-ENSPAGATAAVRNELR-TLGIDLTGLQMADCSGLTPGSR 379 Query: 365 IAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGV 424 + T+ QV + L + G G+ R L G KTGSLQ V Sbjct: 380 LTANTLAQVQARNLDVGGAVAAAEGLSIPGLVGTAANR--LASTQAAGLTRVKTGSLQEV 437 Query: 425 YNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVRFESRL 469 ++ G ++ G AF ++ P D R + F + L Sbjct: 438 SSMTGNVSREQGGVAAFAVIVNN----PEDFEATRTAINEFVAGL 478 >UniRef50_Q9Z541 Putative carboxypeptidase n=3 Tax=Streptomyces RepID=Q9Z541_STRCO Length = 451 Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats. Identities = 83/298 (27%), Positives = 127/298 (42%), Gaps = 8/298 (2%) Query: 171 RNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFT 230 ++ +A + + RT + + + N Sbjct: 149 EGTLTLVGGGDRTLTGEDVAELARTAADGLRAAGRTDVQVRVDDSLFADPSLAEGWNEGY 208 Query: 231 LTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASK 290 + + AVQD + AG + +L GIT +G + RQT + VA Sbjct: 209 YPTEVAPVRSLVVDGAAVQDTSIDAGKVFAKKLAAQGITVTGEVGRQT-AKQSDVPVAQH 267 Query: 291 QSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGN 350 +SAPL D++K MLK SDN IA+T+ RM PGT+ AG+ VRQ+L G+ + N Sbjct: 268 KSAPLSDIVKKMLKTSDNNIAETLLRMTAVE-LGKPGTFEAGTALVRQVLSS-YGISLDN 325 Query: 351 TIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPLAGYDGSL----QYRAGLH 406 + DGSGLSR + I AT+ Q+L I + + + LP++G G+ R Sbjct: 326 FEMHDGSGLSRADRIPAATLAQLLDAITESPALGSILEGLPVSGEAGASLGPEWGRFDDP 385 Query: 407 QAG-VDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAVEPADQRNRRIPLV 463 + GKV AKTG+L G L+G T G F + +P+D ++ L Sbjct: 386 NSECAVGKVHAKTGTLTGAIALSGVTRTDDGDWRIFSFIENNSTADPSDIKDAMDGLA 443 Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats. Identities = 56/308 (18%), Positives = 104/308 (33%), Gaps = 34/308 (11%) Query: 12 SCIAFSVQAANVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALA 71 + N+DE + G +++ +V + D++ +PAS K+ TA Sbjct: 71 LAADDAQLVKNLDERLADERLGTDVSGVVLDADSDTALWDHNGSTALMPASNAKLATATT 130 Query: 72 ALIQLGPDFRFTTTLETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVAT----LKKSG 127 AL LG + FTT + +G L G D TL +D+ + T L+ +G Sbjct: 131 ALTLLGANHEFTTKVVYG--------EGTLTLVGGGDRTLTGEDVAELARTAADGLRAAG 182 Query: 128 VNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDM 187 + V +D S+FA A GW AP + +VD + A K Sbjct: 183 RTDVQ--VRVDDSLFADPSLAEGWNEGYYPTE-VAPVRSLVVDGAAVQDTSIDAGK---- 235 Query: 188 AFIRVASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDL---NRFTLTGCLPQRSEPLPL 244 F + + +T+ +V ++ + P + + Sbjct: 236 VFAKKLAAQGITVTGEVGRQTAKQSDVPVAQHKSAPLSDIVKKMLKTSDNNIAETLLRMT 295 Query: 245 AFAVQDGASYAG--AILKDELKQAGITWSGTLLRQTQVNEPGTVV----------ASKQS 292 A + ++ A+++ L GI+ + + A +S Sbjct: 296 AVELGKPGTFEAGTALVRQVLSSYGISLDNFEMHDGSGLSRADRIPAATLAQLLDAITES 355 Query: 293 APLHDLLK 300 L +L+ Sbjct: 356 PALGSILE 363 >UniRef50_C4DKZ5 D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family n=1 Tax=Stackebrandtia nassauensis DSM 44728 RepID=C4DKZ5_9ACTO Length = 436 Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats. Identities = 92/455 (20%), Positives = 148/455 (32%), Gaps = 94/455 (20%) Query: 22 NVDEYITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFR 81 +D I V + A PAS+ KV TA AAL GP +R Sbjct: 56 ELDPLINGGSLKGKTTATVLDGFTGESLYASQGDKAATPASSTKVATAAAALTARGPAYR 115 Query: 82 FTTTLETKGNVENGVLKGDLVARFGADPTLK---------RQDIRNMVATLK-KSGVNQI 131 T + G +G++V G D L + ++ +K G QI Sbjct: 116 IPTKVV------EGESEGEVVLVAGGDVMLSKDGDGFFRGAASLADLAEQVKKAMGDKQI 169 Query: 132 DGNVLIDTSIFASHDKAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIR 191 +++D SIFA + D+A Sbjct: 170 T-KLVVDMSIFADDP-------------------------------VAPGVPAADVASGY 197 Query: 192 VASYYPVTMFSQVRTLPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDG 251 A P+ + +P A D Sbjct: 198 TAKLEPIMLDGG--------------------------------RSGPDPGSRAARHDDP 225 Query: 252 ASYAGAILKDELKQAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIA 311 ++ L + L G + + + + S + L + L SDN++A Sbjct: 226 SAAVTDALSELL-------GGVEVAEGTAKKDAAELGVVHSPTMQRLAEFALVTSDNLLA 278 Query: 312 DTVFRMIGHARFNVPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMM 371 D + R A+ + ++ G +A +L V + ++D SGLS N + + Sbjct: 279 DALARQTALAK-DKDASFAGGVEATIDVLSD-MDVPMDGVELSDNSGLSLDNRLTSDALA 336 Query: 372 QVLQYIA--QHDNELNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAG 429 V+ A +H ++ P++GY G+L R A V GKV AKTG+L V +L G Sbjct: 337 AVVYQAANGKHTAASGILAGFPVSGYSGALDDRYD--DADVVGKVHAKTGTLTTVNSLTG 394 Query: 430 FITTASGQRMAFVQYLSGYAVEPADQRNRRIPLVR 464 T G+ +AF +G P D + Sbjct: 395 MTVTKEGRLLAFSIIFNGKGNGP-DVEAAIDEVAS 428 >UniRef50_A0R596 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=32 Tax=Corynebacterineae RepID=A0R596_MYCS2 Length = 480 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 92/442 (20%), Positives = 152/442 (34%), Gaps = 77/442 (17%) Query: 31 PAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKG 90 P + + A + ++ PAS KV+T AAL+ L D R TTT+ Sbjct: 102 PDLGLITGRITDADTGAELWEQGARVPMQPASVNKVLTTAAALLTLDRDARLTTTVVAAD 161 Query: 91 NVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHDKAPG 150 + G +V R G D TL G + + + Sbjct: 162 DQ-----PGLVVLRGGGDTTLSA----------APKGT----------DTWYKGAARISD 196 Query: 151 WPWNDMTQCFSAPPAAAIVDRNCFSV-SLYSAPKPGDMAFIRVASYYPVTMF---SQVRT 206 D + VD + +S ++ P D+ +A V + +Q T Sbjct: 197 LA--DQVRARGIRVTRVRVDTSAYSGPTMAPGWDPADIDGGDIAPMESVMLDGGRTQPTT 254 Query: 207 LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQA 266 + +++ + Sbjct: 255 VESRRSKSPALDAGKALAAALGVE------------------------------------ 278 Query: 267 GITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVP 326 ++ GT +A QSAPL + L+ M+ +SDN++A+++ R + A P Sbjct: 279 ----PESVTLMPSGMRGGTTIAEVQSAPLIERLRQMMNESDNVMAESIAREVAEA-LGRP 333 Query: 327 GTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQH--DNEL 384 ++ AV LR G+D + D SGLS N + T+ +V+ A H Sbjct: 334 QSFEGAVGAVLTQLRS-VGIDTSGAKLVDSSGLSVDNRLTALTLDEVVNAAAGHTQPALR 392 Query: 385 NFISMLPLAGYDGSLQYRAGLHQA--GVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFV 442 + +LP+AG G+L R A G + AKTGSL G LAG +T SG+ + F Sbjct: 393 PLVDLLPIAGGSGTLSNRYLDTDAGRAAAGWLRAKTGSLTGTNALAGIVTDRSGRVLTFA 452 Query: 443 QYLSGYAVEPADQRNRRIPLVR 464 + + ++R Sbjct: 453 LISNNAGPTGRTAIDALAAVLR 474 >UniRef50_A5CPH1 D-alanyl-D-alanine carboxypeptidase n=3 Tax=Microbacteriaceae RepID=A5CPH1_CLAM3 Length = 452 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 92/448 (20%), Positives = 150/448 (33%), Gaps = 71/448 (15%) Query: 27 ITQLPAGANLALMVQKVGASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTL 86 + Q P A V+ D + AS KVIT+ AAL LGPD R TT+ Sbjct: 65 LAQDPRLATFEGQVRDAATGRVLFDRNGSTPERTASVMKVITSAAALAALGPDRRIATTV 124 Query: 87 ETKGNVENGVLKGDLVARFGADPTLKRQDIRNMVATLKKSGVNQIDGNVLIDTSIFASHD 146 G G +V G DPTL R Sbjct: 125 VR------GSEPGTVVLVGGGDPTLSR--------------------------------- 145 Query: 147 KAPGWPWNDMTQCFSAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRT 206 + + V +S + A + P+T + Sbjct: 146 ----------------LTSGSSVYPGAPRLSDLAQQVRAAWAADPATAGTPITRIVLDTS 189 Query: 207 LPRGSAEAQYCELDVVPGDLNRFTLTGCLPQRSEP--LPLAFAVQDGASYAGAILKDELK 264 L G + F L ++ +D + G+ + L Sbjct: 190 LFSGDTWIPSWAASERKAGYSSFMTPLQLDADRADPVAVVSARSEDPLARVGSTFRSMLG 249 Query: 265 QAGITWSGTLLRQTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFN 324 + Q V+ +S P+ L++ L SDN++A+++ R++ + Sbjct: 250 ------GSADVTQGTAPAGAAVLGEVESQPVSSLIQTALINSDNVLAESLARLVSI-QVG 302 Query: 325 VPGTWRAGSDAVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYI-AQHDNE 383 T ++ + + + L Q G+D I DG GLS N + P+ + Q++ + + Sbjct: 303 AGNTQQSLATGIPKAL-QAYGLDTSTLTIVDGQGLSPENRVPPSLLAQLMIQVDQRQQAL 361 Query: 384 LNFISMLPLAGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQ 443 LP+AG G+L R A G + AKTG + Y LAG + A G ++ F Sbjct: 362 GYLHDGLPVAGRTGTLAGRFTGDSAVARGHIVAKTGWIDTGYTLAGIVDAADGTKLTFAF 421 Query: 444 YLSGYAVEPADQRNRRIPLVRFESRLYK 471 Y G + +I L + Y+ Sbjct: 422 YAIGNVTG-----DAKIALDALAAGTYR 444 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.312 0.139 0.374 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,659,542,810 Number of Sequences: 3077464 Number of extensions: 115932983 Number of successful extensions: 353895 Number of sequences better than 1.0e-01: 250 Number of HSP's better than 0.1 without gapping: 1583 Number of HSP's successfully gapped in prelim test: 574 Number of HSP's that attempted gapping in prelim test: 347240 Number of HSP's gapped (non-prelim): 3210 length of query: 477 length of database: 1,040,396,356 effective HSP length: 133 effective length of query: 344 effective length of database: 631,093,644 effective search space: 217096213536 effective search space used: 217096213536 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 95 (41.1 bits)