4 c3rfaA_ Probab=99.91   E-value=1.2e-22  Score=169.60  Aligned_columns=206  Identities=16%

Q ss_pred             HHEEEEC---CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             2111107---9978888757865615343333354334554321000111221111357841699999999998767423
Q batch____        39 RTVVFFK---GCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDALEREVMKDDIFFR  115 (292)
Q Consensus        39 r~~iF~~---GCnlrC~yC~N~~~~~~~~~~~~~~~~c~~c~~c~~~~~~c~~~~~~~~g~~lt~eei~~~i~~~~~~~~  115 (292)
                      |.|+-.+   |||++|.||+++..-..                                 +.+|++|+++++......+.
T Consensus        98 r~t~cissqvGC~~~C~FC~t~~~g~~---------------------------------R~ls~~EIv~qv~~~~~~~~  144 (333)
T c3rfaA_          98 RATLCVSSQVGCALECKFCSTAQQGFN---------------------------------RNLRVSEIIGQVWRAAKIVG  144 (333)
T ss_dssp             CEEEECCCEEECSSCCTTCGGGTTCEE---------------------------------EECCHHHHHHHHHHHHHHHC
T ss_pred             CEEEEEECCCCCCCCCEEEECCCCCCC---------------------------------CCCCHHHHHHHHHHHHHHHH
T ss_conf             038997267575366703411244850---------------------------------13588999999999998641


Q ss_pred             -------CCCCEEEECC-CCHHHHHHHHHHHHHHHHH-CCC-----EEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf             -------5786587059-6412318999999999987-498-----3998212249999999985036627972232216
Q batch____       116 -------TSGGGVTLSG-GEVLMQAEFATRFLQRLRL-WGV-----SCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDA  181 (292)
Q Consensus       116 -------~~~~gV~~sG-GEPll~~~~l~el~~~~k~-~g~-----~v~l~TnG~~~~~~~~~l~~~~d~v~idik~~~~  181 (292)
                             ..+.+|+|+| |||+++++.+.++++.+.+ .|+     .+.++|+| ..+...+......+.+.+|++++++
T Consensus       145 ~~~~~~~~~i~~vv~~g~GEPl~n~~~v~~~l~~l~~~~gl~i~~~~itvst~g-~~~~i~~L~~~~~~~l~isl~a~~~  223 (333)
T c3rfaA_         145 AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSG-VVPALDKLGDMIDVALAISLHAPND  223 (333)
T ss_dssp             CHHHHSSCSCSEEEECSSSCGGGCHHHHHHHHHHHHSTTTTCCCGGGEEEEESC-CHHHHHHHHHHCCCEEEEECCCSSH
T ss_pred             HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCC-CHHHHHHHHHHCCCEEEECCCCCCH
T ss_conf             433203554212575058632249899999999852115524301121015755-4178999873158489980677987


Q ss_pred             HHHHHHHCCC--------CCCCCCHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHH
Q ss_conf             8788750576--------41001015888863002320110234455899999999999985699789997243365102
Q batch____       182 TQARDVVKMN--------LPRVLENLRLLVSEGVNVIPRLPLIPGFTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPK  253 (292)
Q Consensus       182 ~~~~~~~g~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ei~~i~~~l~~lg~~~v~l~p~~p~g~~k  253 (292)
                      +.++.+++.+        .+.+..........+..+.+.++++++.||+++++.+++++++.++. .|+++||+|.....
T Consensus       224 e~r~~l~p~~k~~~l~~i~~~~~~~~~~~~~~g~~v~i~y~li~g~nDs~e~a~~l~~~l~~~~~-~Vnlip~nP~~g~~  302 (333)
T c3rfaA_         224 EIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAP  302 (333)
T ss_dssp             HHHHHHSGGGGTSCHHHHHHHHHHHHHHCTTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECCCCTTCC
T ss_pred             HHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCC-EEEEEECCCCCCCC
T ss_conf             78623140678889999999999999977643980899855408999898999999999850898-79999624688888


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             33225520007899979899999999999869869978
Q batch____       254 YRLLGKTWSMKEVPAPSSADVATMREMAERAGLQVTVG  291 (292)
Q Consensus       254 ~~~l~~~~~~~~~~~p~~e~l~~~~~~~~~~G~~V~ig  291 (292)
                      |.+            |+.+.+.++++++++.|++|.||
T Consensus       303 ~~~------------p~~e~i~~f~~~L~~~Gi~v~iR  328 (333)
T c3rfaA_         303 YGR------------SSNSRIDRFSKVLMSYGFTTIVR  328 (333)
T ss_dssp             CCB------------CCHHHHHHHHHHHHHTTCEEEEC
T ss_pred             CCC------------CCHHHHHHHHHHHHHCCCEEEEE
T ss_conf             778------------89899999999999789869976