BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= batch____ (210 letters) Database: uniref50.fasta 3,077,464 sequences; 1,040,396,356 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI 428 e-119 UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A... 191 1e-47 UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=... 170 3e-41 UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=... 164 1e-39 UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ... 156 3e-37 UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=... 155 9e-37 UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati... 154 2e-36 UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula... 142 1e-32 UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ... 135 1e-30 UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga... 133 3e-30 UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH 130 2e-29 UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6... 129 7e-29 UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax... 124 2e-27 UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum... 123 5e-27 UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro... 122 6e-27 UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 121 1e-26 UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto... 119 9e-26 UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C... 118 1e-25 UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol... 115 6e-25 UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5... 114 2e-24 UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ... 114 3e-24 UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax... 113 4e-24 UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ... 111 1e-23 UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=... 110 3e-23 UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax... 109 5e-23 UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ... 109 7e-23 UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea... 105 7e-22 UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ... 103 4e-21 UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket... 99 8e-20 UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=... 98 1e-19 UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ... 97 2e-19 UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ... 97 3e-19 UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T... 94 3e-18 UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_... 91 2e-17 UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_... 86 6e-16 UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo... 71 2e-11 UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob... 71 3e-11 UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax... 69 8e-11 UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta... 67 4e-10 UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax... 66 9e-10 UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 62 1e-08 UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba... 60 3e-08 UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu... 56 6e-07 UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac... 56 6e-07 UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane... 56 7e-07 UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ... 56 8e-07 UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob... 54 3e-06 UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX 53 7e-06 UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari... 53 8e-06 UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro... 50 3e-05 UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU... 48 2e-04 >UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI Length = 210 Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK Sbjct: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF Sbjct: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 >UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4 Length = 209 Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 1/176 (0%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 IAL + GQ+ AA+LGTWGDL+P+ EPDMLT I RL A+++SGE+ + +AFK+RVI+N Sbjct: 8 IALALGGQA-HAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFKQRVIKN 66 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126 SLRP V G+ + + DP+ + D+ D+EGRVFAR+G+ +NPL VPF QTL+F Sbjct: 67 SLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPFLQTLFF 126 Query: 127 INGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 I+ DD Q+AWM+ Q P T K+ILV G I + + LD+R+YFDQ GVL Q+ + Sbjct: 127 IDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKFAL 182 >UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9 Length = 203 Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 118/189 (62%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ + LI L SV A D+GT+G L+P+ EPDM+ +I RL ++++GEM R + + Sbjct: 1 MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + V +++RPP V G+ + + LFDPS DI D G +G+ NPL ++PF Sbjct: 61 KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 TLYFINGD+PA++ W+K + ++ KIILV+GS+PE + LD +++FDQ GV+ R Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180 Query: 181 GIDQVPARV 189 GI PA V Sbjct: 181 GITHTPAEV 189 >UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ5_9ENTR Length = 198 Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 79/195 (40%), Positives = 121/195 (62%), Gaps = 7/195 (3%) Query: 9 LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRK---MDAFKERVIR 65 L+ + A ++GT+GD+W + E ++LTVI ++ +S +G + ++ERV + Sbjct: 2 LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQV----ESAFLGNEEKIHQEWRERVTK 57 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 N+ RP V G+ + K +R FDPS + DIRD+ G VFA +G+ +NP PFN+TLY Sbjct: 58 NAERPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLY 117 Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 FI+GDD Q+AW+ Q P T KIILV G+I ++L+ R+YFDQ GVL R GI+++ Sbjct: 118 FIDGDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKL 177 Query: 186 PARVSAVPGDRFLKV 200 P+ V +P L++ Sbjct: 178 PSVVDEMPNHSLLRI 192 >UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3 Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR Length = 206 Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 2/200 (1%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R L+ +L + A DLGT G L+P+ EPD+LT I QRL +++SGE+ R + Sbjct: 4 RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 RV +++RP V G+ K S +DP+ + IRD +G V AR G+ +NPL VP++ Sbjct: 64 RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 +TLYFI+GD+PAQ+ W+K+Q K+ILV+G+I + +LD VYFDQ G L + G Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183 Query: 182 IDQVPARVSAVPGDRFLKVE 201 + P RV+ DR+L+VE Sbjct: 184 FEHTPVRVTR--DDRWLRVE 201 >UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL Length = 237 Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 76/129 (58%), Positives = 92/129 (71%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 A D G G+++PV EPDML + QR +L SG ++MDAF +RV RNS RP V GIG Sbjct: 2 AKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGIG 61 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137 ++ Y R FDPSV L D++D +GRVFARQGEV+NPL VPF QTLYFI+GDD QVAW Sbjct: 62 KSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVAW 121 Query: 138 MKRQTPPTL 146 M+RQ P TL Sbjct: 122 MQRQRPQTL 130 >UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S166_SEROD Length = 208 Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 1/181 (0%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 V AA+LG G L+P+ E DM+ I QRLTA+EQSGE+ + +ERV +++RP V G Sbjct: 17 VYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKETEERVKEHAVRPTPVDG 76 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + T++ + +DP+ + I D G V A +G+ +NPL + ++QTLYFI+GDD Q+ Sbjct: 77 LSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTITYDQTLYFIDGDDKQQM 136 Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGD 195 +W+ + K+ILV G++ + +LD VYFDQ+G L Q+ G VPAR+ AV GD Sbjct: 137 SWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQKFGFKHVPARI-AVEGD 195 Query: 196 R 196 R Sbjct: 196 R 196 >UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN17_9PROT Length = 205 Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 2/204 (0%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R A L A DLG G ++PV EPD+ I +L LE +GE+ R + ++ Sbjct: 3 RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + ++ RP VPG+ RT+ DP++ + DI +G+V AR GE NPL YVP Sbjct: 63 RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122 Query: 122 QTLYFINGDDPAQVAWMK-RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 QTL F +GDD QVAW K R +ILV G + E+ + + +++FDQ G L R Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182 Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204 GI QVPARVS GD L E +P Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205 >UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2 Tax=Sphingomonadales RepID=A5VGR7_SPHWW Length = 217 Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 1/188 (0%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 C G L + G + A D GT G +P+ EPD+L I RL E SGE+ R F +R Sbjct: 13 CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 V RP V GI ++ S FDPSVR+ D+RD +G + A+ G+ +NPL +V +Q Sbjct: 73 VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L F++GD+ Q+ W + +++KII V+GS E R YFDQ G L R GI Sbjct: 133 DLVFVDGDNAEQLDWACGKY-SDVKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191 Query: 183 DQVPARVS 190 + PA VS Sbjct: 192 EHTPAVVS 199 >UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms RepID=A2SNI4_METPP Length = 230 Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 1/183 (0%) Query: 9 LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68 L+ S A LG +G++W ++EPD + + +LT +E+ GE+ R + +++R + + Sbjct: 25 FLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYRDRYVASIE 84 Query: 69 RPPAVPGIGRTEKYGSRLFDPSVRLAADIRD-NEGRVFARQGEVMNPLQYVPFNQTLYFI 127 P + GI + R FDPSV D+ D + G++ + G +NPL Y P + L FI Sbjct: 85 NPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTPLTKALIFI 144 Query: 128 NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 +G DPAQVA+ K ++ K+ILV GS E+ + YFDQ G L R GI +VPA Sbjct: 145 DGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTRFGIKRVPA 204 Query: 188 RVS 190 VS Sbjct: 205 VVS 207 >UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH Length = 210 Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/170 (42%), Positives = 98/170 (57%), Gaps = 3/170 (1%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 D G G ++PV E D+L I RL +E+SGE + K R I RP V G+ R Sbjct: 23 DYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIRA 82 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139 + S FDP++ LAADIR+ +G + G +NPL V L F++GDDPAQ+AW Sbjct: 83 HESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWAL 142 Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARV 189 RQ P +K+ILV+G+ E+ K+ R YFDQ G L ++ GI VPARV Sbjct: 143 RQDP---NAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARV 189 >UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN Length = 212 Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 3/193 (1%) Query: 7 IALLIWGQSVA-AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 +A G + A A DLG G +P+ E D+ VI +L +++SG+M + Sbjct: 14 LAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAHAAE 73 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 + RP V G+GRT+ S +DPS+ + DI D +G VFA G+ +NPL V Q L Sbjct: 74 KARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQKLI 133 Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 FI+GD+ W Q +++KIILV+G+ ++ K+ D R+YFDQNG L + GI+ V Sbjct: 134 FIDGDNAKDFQWALDQG-SEVQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGIENV 192 Query: 186 PARVSAVPGDRFL 198 PA V GD+ L Sbjct: 193 PAVVKQ-EGDKLL 204 >UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX38_AZOSE Length = 211 Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%) Query: 6 LIALLIWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64 L AL+ S +A +G T+G WP+ EPDM+ I + L+ +GEM F+E + Sbjct: 15 LTALMC--SSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQEETL 72 Query: 65 RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124 PP VPGI + + FDPSV + D+ D +GRV A+ G V NP Y+ +++L Sbjct: 73 ATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIALSKSL 132 Query: 125 YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184 FI+ D QV+ R ++++LV GS E+Q ++Y+DQ+G L Q GI + Sbjct: 133 VFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHFGIKR 192 Query: 185 VPARVS 190 VPA +S Sbjct: 193 VPAVLS 198 >UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS5_LEGPH Length = 202 Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 1/189 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ LI +++ A D G +G + + E D L I Q++ ++ +GE FK Sbjct: 1 MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +RV + RP + + R E + F+PS+ + D++D+ G+V +QG V+NPL V Sbjct: 61 KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 + TL F +GDD AQVAW+ ++ + K+IL GS+ E+ L +YFD NG L + Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179 Query: 181 GIDQVPARV 189 I +PARV Sbjct: 180 QIKYLPARV 188 >UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F366_9PROT Length = 228 Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust. Identities = 74/186 (39%), Positives = 101/186 (54%), Gaps = 2/186 (1%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 DLG G +P++E D L I +RL+A+++SGE+ R + + RP V GI RT Sbjct: 44 DLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIERPKPVSGITRT 103 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW-M 138 EK DP++ L IRD +GR+ G +NP ++ ++ L FI+GDD QVAW + Sbjct: 104 EKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDGDDKEQVAWAL 163 Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198 + K ILV+GS E+ K RVYFDQ GVL ++L I VPA VS G R Sbjct: 164 TMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAIVSQ-DGKRLR 222 Query: 199 KVEFIP 204 E P Sbjct: 223 VAEMAP 228 >UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4 Length = 212 Score = 121 bits (304), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 6/211 (2%) Query: 2 RCRGLIALLIWGQSVAAA---DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 R R L AL + + AA D G +G L+P+ EPD+L I+ RL +E SGE+ A Sbjct: 4 RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 +ER RP + E+Y + FDPS+ L D+ D++GRVFAR G V+NPL Y Sbjct: 64 MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 F + + I+GD QV + + L++ I++ +GS + ++ R +FDQ+ V+ Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182 Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 R G++++P+ + D L +E IP E + Sbjct: 183 RFGLERLPSVIKR--ADPILLIEEIPTGEAQ 211 >UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z4_ACIBC Length = 212 Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 5/204 (2%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 L+ +L + + DLG G ++ ++EPD L I +L ALE++GE+ RK R + Sbjct: 9 LLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVSRAMN 68 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 ++ P V I RLFDP++ L+ DI+ +EG V AR G +NPL V +TL Sbjct: 69 SAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMTKTLV 128 Query: 126 FINGDDPAQVAWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183 G DP QV +K+ T +++I ILV GS ++ ++ +VYFDQ G + +RL I Sbjct: 129 LFKGSDPEQVQAVKKLT-ELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRLQIT 187 Query: 184 QVPARVSAVPGDRFLKVEFIPAEE 207 VP+ V + L++ +PA+E Sbjct: 188 SVPSIVRQ--NGKMLEISEVPAKE 209 >UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW Length = 210 Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 6/204 (2%) Query: 5 GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64 G++ +L+ S+ A +LG +G ++E D+L + MQ+ L + + M + ++ Sbjct: 7 GILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSHLL 65 Query: 65 RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124 +P + GIG+T+ Y FDPS+ + DI ++ ++ ++G +NPL V +Q L Sbjct: 66 AQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQDL 125 Query: 125 YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184 F++ D Q+AW + P K ILV+G ++++ L +YFDQ GVL ++ GI Sbjct: 126 LFVDATDTEQLAWAQALYP---SGKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGIQS 182 Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208 VPARVS G R LK+E IP E Sbjct: 183 VPARVSQ-EGLR-LKIELIPIGES 204 >UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales RepID=A0B4N9_BURCH Length = 213 Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 3/196 (1%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 S A DLG G +P+ E D + ++ +RL L +G + ++R + + P VP Sbjct: 20 SAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRARQRALHDVTSLPPVP 79 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 GI +Y SRL DP+V A + ++EG V G +NPL V ++ L F +G DPAQ Sbjct: 80 GISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTLHERLVFFDGRDPAQ 139 Query: 135 VAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 V ++ + +S K IL GS ++ KS +VYFDQ G L QR GI +VPA +S Sbjct: 140 VKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQRFGITRVPAVISQRG 199 Query: 194 GDRFLKVEFIPAEEGR 209 L+ E PAE+ R Sbjct: 200 NQLLLEEE--PAEQLR 213 >UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM Length = 211 Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 3/204 (1%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 LI L+I + A G G+++PV E L +I +RLTAL SG + + + Sbjct: 7 LILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAAE 66 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 ++ RP A+ + RT + + P + L+ DIRD GRV +G +N L +P Q + Sbjct: 67 HANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPCW 125 Query: 126 -FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184 F N DD AQ+ W + Q K+IL G+I +K L S +YFDQ G + ++L I Sbjct: 126 LFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRITH 185 Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208 VPA V+ G+R + VE E G Sbjct: 186 VPAIVTR-KGNRLVIVEHAIKENG 208 >UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL Length = 210 Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 77/198 (38%), Positives = 111/198 (56%), Gaps = 12/198 (6%) Query: 1 MRCRGLIALLIWGQSVA-AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSG---EMGRKM 56 +R IA+ I A A DLG +G + + E D+L I+ +L E+ G E+ RK Sbjct: 4 VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63 Query: 57 -DAFKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL 115 DA ++RV PP VPGI T K + L+DPS+ + +I D++GRVFAR+GE +NPL Sbjct: 64 ADATRKRV----ESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPL 119 Query: 116 QYVP-FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQ 172 + +P +N+ L FI+G D QV + Q+ + + I LV GS ++ YFDQ Sbjct: 120 ERLPSYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQ 179 Query: 173 NGVLCQRLGIDQVPARVS 190 G L + GI QVPA V+ Sbjct: 180 LGTLTTKFGITQVPATVT 197 >UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms RepID=O85939_SPHAR Length = 231 Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 3/191 (1%) Query: 3 CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 GL L+ W + AAD G G +P+ E D+LT I RL LE +G + R + Sbjct: 10 ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 E+ + + RP V G+ LFDPS+ DI D +G + A +G +NPL V Sbjct: 70 EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +Q L F++GD+ A++AW + T +KII V GS + K R YFDQ G L + Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188 Query: 181 GIDQVPARVSA 191 GI PA VSA Sbjct: 189 GIRHTPAVVSA 199 >UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0C0_9PROT Length = 214 Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 1/184 (0%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 + +L+ + DLG G + + E D++ +I +L +E++GE+ + + +K RVI Sbjct: 17 LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126 P +PGI T + +DPS+ DI D G++ +G +NPL Y+ +N+ L F Sbjct: 77 IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136 Query: 127 INGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 ++G D Q+ + K+ T + K++L+ G E+ + +YFDQ G L +R I QV Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196 Query: 186 PARV 189 PA V Sbjct: 197 PAIV 200 >UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG1_9GAMM Length = 241 Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 17/201 (8%) Query: 3 CRGL-IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 RG+ + LL + G G+L+P+ E DML I RLT LE +GE + F E Sbjct: 15 LRGVSVTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVE 74 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL------ 115 V + RPP V G+ T + DPS++LA DI+D +G + +G V+NP Sbjct: 75 SVENSVRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWP 134 Query: 116 -----QYVPFNQTLYFINGDDPAQVAWMK--RQTPPTLESKIILVQGSIPEMQKSLDSRV 168 + ++ + F +GDDP Q AW K R P K L GS E+ D+R+ Sbjct: 135 IDIPKKSFDYSHVIVFFDGDDPRQRAWAKQYRADKPI---KWTLTNGSPEEVATEFDARI 191 Query: 169 YFDQNGVLCQRLGIDQVPARV 189 YFDQ G ++ + +P+ + Sbjct: 192 YFDQQGHYSRQFQLSHIPSLI 212 >UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANK9_BURGB Length = 212 Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 7/193 (3%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R + A+++ + DLG G +P+ E D + ++ RL L+ SG + + Sbjct: 6 RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + + PAVPG+ +Y RL DP+V + + ++EG V G +NPL V + Sbjct: 66 RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125 Query: 122 QTLYFINGDDPAQV----AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLC 177 + L F +G DPAQV A R+ K IL GS ++ KS +VYFDQ G L Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAV---KPILTGGSWFDLTKSWKRQVYFDQQGRLT 182 Query: 178 QRLGIDQVPARVS 190 QR GI +VPA +S Sbjct: 183 QRFGITRVPAVIS 195 >UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO Length = 213 Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 5/202 (2%) Query: 8 ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67 AL+ + AD GT G ++ + E + L I ++L A+E++GE+ +K +R + ++ Sbjct: 12 ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71 Query: 68 LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127 P V GI + FDP++ L+ +I +EG + A G V+NPL + ++TL F Sbjct: 72 KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131 Query: 128 NGDDPAQVAWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 +G+ QV ++R + K+ +LV G+ E+ K +VYFDQ G + R GI V Sbjct: 132 DGNKKDQVEAVERLI-KVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAV 190 Query: 186 PARVSAVPGDRFLKVEFIPAEE 207 PA V + L++ +PA+E Sbjct: 191 PAIVRQ--KGKLLEITEMPAQE 210 >UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae RepID=A5CD93_ORITB Length = 219 Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 5/172 (2%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 V D GT G ++P+ E +L VIM +L A +SG + + F+E++ + +RP V Sbjct: 36 VEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVKN 95 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + + + +R++D + DI+ G + R+G +NPL+ + + + L I+GDD QV Sbjct: 96 LSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQV 155 Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 AW+K + KI+LV G+ E+ L ++FDQ G+L ++ I VPA Sbjct: 156 AWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPA 202 >UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella RepID=D1RMN6_LEGLO Length = 208 Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 2/175 (1%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 V A +LG +G L+PV E D+ VIM +L LEQSG + + RV + LR P Sbjct: 18 VYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARV-EDHLRRPKPLH 76 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + T + DPS+ + + ++G + A++G +NP + V F++TL+F + DD Q+ Sbjct: 77 LPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRKQL 136 Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190 AW+K + K IL G + + L S VYFD G L + + VP+ VS Sbjct: 137 AWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVS 190 >UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia RepID=Q1RJF2_RICBR Length = 254 Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 5/168 (2%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 D G ++P+ E +L VIM +L +Q+G + + + FK +V + RP V + + Sbjct: 75 DYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPVLALAKA 134 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139 + +DPS D++D G + + G +NPL+ + + + L FI+GDD QV W K Sbjct: 135 SINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQQVKWAK 194 Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 + K++L G+ ++ + L+ V+FDQ GVL R I VPA Sbjct: 195 SKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPA 237 >UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T1_LISDA Length = 256 Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 18/207 (8%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 A +LGT +P+ E DML IM RL E +GE+ + D F ERV ++++RP V G+ Sbjct: 23 AKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTPVEGLT 82 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-----------VPFNQTLYF 126 T + DP++ LA DI+D G+V +G +NP + ++ L F Sbjct: 83 TTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLSKILVF 142 Query: 127 INGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 ++GDD Q+ + K + L+ K ILV+G ++Q L +VYFDQ G + +R Sbjct: 143 LDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGNITKRF 202 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEE 207 I + + + G R+ EF ++E Sbjct: 203 DIKHI-STTAKQAGTRWEVKEFDVSQE 228 >UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6 Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8 Length = 234 Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 21/190 (11%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 AA +GT G ++P+ E DML I RL LE++GE+ + F+E V RP V G+ Sbjct: 19 AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-------------VPFNQTL 124 T+ L DP++ LA DI D G + +G +NP F++TL Sbjct: 78 TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137 Query: 125 YFINGDDPAQVAWMK-----RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 F +GDD QV W K P T+ K IL G + LD+RVYFDQ G L + Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTI--KWILTGGEPETLHVQLDARVYFDQQGNLSRA 195 Query: 180 LGIDQVPARV 189 L + +VP+ V Sbjct: 196 LTLKRVPSVV 205 >UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK Length = 213 Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 SV D G G + V E +++I RL+ L+ + + + + + L P V Sbjct: 15 SVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMRRIAKQQILEPAPVL 70 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 GI T + +DPS L DI+ +G++ + G +NPL ++ F++ L FI+G Q Sbjct: 71 GIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVFDRELIFIDGRSQKQ 130 Query: 135 VAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 V W+K + T E +IILV G I E+Q+ + +YFDQ G L + Sbjct: 131 VEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGRTLYFDQGGELTNKF 190 Query: 181 GIDQVPARV 189 GI+QVPA V Sbjct: 191 GIEQVPAIV 199 >UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 Tax=Betaproteobacteria RepID=A1W649_ACISJ Length = 212 Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 87/177 (49%), Gaps = 3/177 (1%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 A DLG G + + EP +L +I QRL E+SGE+ R + R P V G Sbjct: 22 AGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAPVAG 81 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + T K + FDP+ L +I +G + G NPL V ++ L F + D QV Sbjct: 82 VQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDSRQV 141 Query: 136 AWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190 R+ + K+ IL GS ++ KS VY+DQ G+L +RLGI QVPA VS Sbjct: 142 -RQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVS 197 >UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2 Length = 218 Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 1/167 (0%) Query: 25 GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYGS 84 G +P+ E + I RL A + SG++ ++R+ R++L + G+ + K Sbjct: 39 GTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDRINRSALNLQPLEGLAKATKGSV 98 Query: 85 RLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTPP 144 R FDPS L I D +G++ A G V+ PL+ P ++F +G +P Q+ K+ Sbjct: 99 RYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPFKMFFFDGREPDQIELAKKLAAE 158 Query: 145 TLESKI-ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190 ES + IL G+ E+ +D VY+DQ G + + +++VP+ VS Sbjct: 159 YGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQLNEVPSLVS 205 >UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM Length = 205 Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 2/183 (1%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 +LG G +PV E L I+ L ++G + KE V RPP + + T Sbjct: 22 NLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEKKKEAVKSFLERPPGIK-LPTT 80 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139 ++Y R +D + + DI EG + A+ G+ +NPL + + F N DD Q AW++ Sbjct: 81 DEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFKRMTKQYCFFNMDDKMQRAWIE 140 Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLK 199 + ++SK I V GS+ + +S RV+FDQ G L R I VPA V + G++ Sbjct: 141 QNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVDRFDIRHVPAIVRQI-GNKIYV 199 Query: 200 VEF 202 E+ Sbjct: 200 EEY 202 >UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR9_PSEPU Length = 412 Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 28/186 (15%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR----NSLRPPAVPG 75 DLGT G + EPD++ V QR+ L+ DA K+R I N P P Sbjct: 218 DLGTIGSTQEIIEPDLMEVAKQRIAELD--------TDAMKKRAIARFWDNHKGHPLPP- 268 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + +RL DPSV + DI D++GRV + G + NPL +PF+Q L I+ P QV Sbjct: 269 ---VTESATRLVDPSVIVPDDILDSQGRVVQKAGRI-NPLDMMPFDQKLVVIDPTQPWQV 324 Query: 136 AWMKRQTPPTLESKIILVQGS-IP---------EMQKSLDSRVYFDQNGVLCQRLGIDQV 185 A KR+ E+ + V + IP +Q SLD+ +Y + +R I + Sbjct: 325 ALAKREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYLLPPD-MAERFQILRA 383 Query: 186 PARVSA 191 P+ V+A Sbjct: 384 PSVVTA 389 >UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria RepID=C6YK86_VIBCH Length = 406 Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 22/199 (11%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 LG G + + EPD++ V MQRL +L+ + A K++ I + + Sbjct: 212 SLGQRGPIHSILEPDLMQVAMQRLQSLD--------LGALKKKAIERFWSRQTFTDLPKA 263 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV---- 135 +Y R DP++ + + D GR G +NPL+ +PF Q L N + +V Sbjct: 264 TQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAVA 323 Query: 136 AWMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 W++ Q +I Q S+ ++K+LDS VY N L QR + P+ Sbjct: 324 HWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPSF 382 Query: 189 VSAVPGDRFLKVEFIPAEE 207 V A G F ++E IPA+E Sbjct: 383 VQA-KGLAF-EIEEIPAKE 399 >UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q5_PELPD Length = 200 Score = 69.3 bits (168), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 6/168 (3%) Query: 45 ALEQSGEMGRKMDAFK--ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEG 102 ALE+ E +K D K + + N RP + + R L D S + +DI +N+G Sbjct: 35 ALEELEERVQKADWKKHIQSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKG 94 Query: 103 RVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQ 161 + +G NPL ++ F +TL INGDDP QV W K + + + L QG Sbjct: 95 ELLYPKGYTFNPLDFISFEKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTS 154 Query: 162 KSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 K L VY+ L R + VP+ V A R ++VE I G+ Sbjct: 155 KDLARPVYYATKP-LVARFQLRSVPSVVKA--SGRCMEVEEIFINGGK 199 >UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU20_BURM1 Length = 222 Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 22/201 (10%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 A DLGT +P+ + D I +QSGE+ +++R I + PP++ GI Sbjct: 22 AEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRDRTIESIKNPPSL-GIA 79 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137 + + L + ++ D RD+ G+V R+G V+ PL+ +P L FI+G D QV + Sbjct: 80 TSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLTNGLLFIDGTDARQVEY 139 Query: 138 MKRQTPPTLESKIILVQGSIPEMQKSLDSRV----------YFDQNGVLCQRLG------ 181 R++ + KI+L GS P + ++V YFDQ ++ L Sbjct: 140 AIRRS-QSERLKIVLTAGS-PYALRVKYAKVPWHGGTGVPFYFDQRRMIISTLSKLYNIQ 197 Query: 182 IDQVPARVSAVPGDRFLKVEF 202 I+ VPA + GDR L V+F Sbjct: 198 INSVPAAIFQ-QGDR-LAVQF 216 >UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales RepID=A1AKL5_PELPD Length = 218 Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 9/184 (4%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 I LL+ S A +LG +G + + E D L I +R ++ +R + N Sbjct: 10 IVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWH-------KVLDKRKVEN 62 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126 PP + R ++ S D + D+ D +G + +G NPL YV + +TL Sbjct: 63 FQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKTLVV 122 Query: 127 INGDDPAQVAWM-KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 I+G DP QV W + L+ ++L +G + + K + SR F + + +RL + V Sbjct: 123 IDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRI-SRPLFYADRKIIERLKLKAV 181 Query: 186 PARV 189 P+ V Sbjct: 182 PSVV 185 >UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 Length = 503 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 22/193 (11%) Query: 25 GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKM-DAFKERVIRNSLRPPAVPGIGRTEKYG 83 G ++PV+E ++ + +R + G R + D +K + + + PPA +++ Sbjct: 309 GTIYPVEEKSIIKELEERAQKYDWEGAKKRAVADTWKNQWMVD--LPPA-------QEHK 359 Query: 84 SRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTP 143 L DP+VR+ D++D +GRV A GE++NPL P N T+ + +P Q+ W ++Q Sbjct: 360 EFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQYR 419 Query: 144 PTLESKIIL-----VQ-----GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 L S ++ +Q + ++++ + +V F N + R I PA ++ Sbjct: 420 QRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-TD 477 Query: 194 GDRFLKVEFIPAE 206 D+F F AE Sbjct: 478 QDKFRITLFSEAE 490 >UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter RepID=Q4HP76_CAMUP Length = 248 Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 20/174 (11%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 +++ LI+ + LG ++ P E DM+ +I + + ++ E+ + + +E+ Sbjct: 9 ILSTLIYAGNTKELSLG---EVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQAKE 63 Query: 66 NSLR------PPAVPGIGRTEKYGSRLFDP--SVRLAADIRDNEGRVFARQGEVMNPLQY 117 N ++ P P + R+F P + L DI+D G+V ++G NP Y Sbjct: 64 NVIQYKPKGLTPLTPALE------DRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANY 117 Query: 118 VPFNQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYF 170 V + L I+G + +V W K+ L K++L GS E+ K L V++ Sbjct: 118 VKISYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEVFY 171 >UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ6_SYNAS Length = 277 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 8/176 (4%) Query: 14 QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73 Q+ ADLG G +PV E D L+ I +R A++ G+ D + R + RP + Sbjct: 83 QAAVCADLGNIGATYPVVERDALSEIEERAKAVD----WGKAFDPKRTRERIQNYRPEGM 138 Query: 74 PGIGRTEKYGSRLF--DPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDD 131 + +K R+F D S L DI D G + +G NPL +V L I+G + Sbjct: 139 EALPAAKK--DRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGN 196 Query: 132 PAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 Q+ W K + ++L+ G R F + + +R + VPA Sbjct: 197 ERQIEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPAFYADARIVKRFQLKAVPA 252 >UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J843_ACIF2 Length = 422 Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%) Query: 25 GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN-SLR-PPAVPGIGRTEKY 82 G W V EP+M+++ Q++ + ++ KER N S R A+P + Y Sbjct: 236 GHTWKVAEPNMISIFEQKIKTFN----WKKTVEQAKERGWENMSTRLGDALPDSLHGKSY 291 Query: 83 GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142 ++PS+ A IR G+V R+G+ +NPL PF T +I +PAQ AW Q Sbjct: 292 ---TYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVF-NPAQ-AWQVAQV 346 Query: 143 PP--TLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARV 189 + ++++ +P+ + D V Q+ V L RLGI++VPA + Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALI 401 >UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2Z3_SHESA Length = 431 Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTAL---EQSGEMGRKMDAFKERVIRNSLRPPAVP 74 + LG D + + E DML +I Q+L + E+ E + KE + SL+ V Sbjct: 225 SGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDV- 283 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 +Y DP VR D +G+ FA+ G+V++P + L+ I+ Q Sbjct: 284 ------RYK---IDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQ 334 Query: 135 VAWMKRQTPPTLESKIILVQGSIP---------EMQKSLDSRVYFDQNGVLCQRLGIDQV 185 +AWM T ++ ++ ++P +Q L R+Y Q + R ++ + Sbjct: 335 LAWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHL 393 Query: 186 PARVSAVPGD 195 PA V G+ Sbjct: 394 PALVDLFKGE 403 >UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU3_9VIBR Length = 213 Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 27/200 (13%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 S+ AA+ G + + E D+ I QRL LE G + + ++R IR+ P Sbjct: 15 SLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQRDR-IRDQFEQPMPV 73 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQ-----------YVPFNQT 123 + T+ + L DPSVRL A G +NP + + Sbjct: 74 SLSATQSPTTFLVDPSVRLPATYDGQP------PGRWVNPFDASTWPSPPLGMTYHYPRA 127 Query: 124 LYFINGDDPAQVAWMKRQT---PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 L F +G D Q W + T P T IL G + ++L++ VYFDQ G L ++L Sbjct: 128 LVFFDGRDRKQRRWATQFTADRPITW----ILTGGRPQTLARTLNAPVYFDQGGYLSRKL 183 Query: 181 GIDQVPARVSAVPGDRFLKV 200 + VP+ V V R+ +V Sbjct: 184 RLRSVPSVV--VQAHRYWEV 201 >UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F048_9HELI Length = 219 Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%) Query: 25 GDLWPVKEPDMLTVIMQRLTA----LEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTE 80 G + KE D+L +I + LT LEQ +G++ D KE + + RP + + Sbjct: 26 GKTYEFKERDILELIQEHLTKNRPELEQKL-LGQR-DKLKENI--KNWRPKDMVKLTPAP 81 Query: 81 KYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKR 140 K + D + L DI+D+EG + QG NP +Y + + IN +D ++ W+++ Sbjct: 82 KNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKYARLSYGIVVINANDKEELEWLEK 141 Query: 141 -QTPPTLESKIILVQGSIPEMQKSLDSRVYF 170 T+ +I L +GS EM + Y+ Sbjct: 142 GGYLNTIAYRIFLSEGSYYEMIQKHKQDFYY 172 >UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX Length = 421 Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 34/211 (16%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 DLG G + + EPD++ V +RL ++ + + ++ F + N L R Sbjct: 221 DLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFNEL--------PRA 272 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFINGD 130 K +R DPSV + +DI +G VFA G+V+NPL PF Q + + Sbjct: 273 PKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDPL 332 Query: 131 DPAQVAWMKRQTPP-TLESKIILVQGSIPEMQK------------SLDSRVYFDQNGVLC 177 D Q+ + ++ P LE + + E K + D+ VY L Sbjct: 333 DKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDLI 391 Query: 178 QRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208 R ++ P+ ++A G +F+ E AEEG Sbjct: 392 TRFELEHTPSVITAR-GKKFVVREL--AEEG 419 >UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris RepID=Q8L272_PROVU Length = 416 Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 35/208 (16%) Query: 20 DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79 DLG G + E +L +I Q++ L+ +D + ++ PPA+ Sbjct: 227 DLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEFTDF-PPAL------ 279 Query: 80 EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139 K+ + +PSV + DI +G+V A+QG + NPL +PF L F + A++ W + Sbjct: 280 -KHNQKFINPSVVIPQDILAPDGQVVAKQGRI-NPLDVIPFRLKLIFFD----ARIDWQR 333 Query: 140 R-------QTPPTLESKIILVQGSI-----PEMQKSLD-----SRVYFDQNGVLCQRLGI 182 + P +E IL+ ++ Q + + SR+Y Q G + R GI Sbjct: 334 KIARREYQNAEPGIEP--ILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGI 390 Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEGRK 210 VP+ V+A D+ + P +E K Sbjct: 391 TSVPSIVTAT--DKQYVINEYPEDEANK 416 >UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHD8_9BACT Length = 216 Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS-LRPPAVPGI 76 A DLGT+G + + E D++T I +R + + RK +A K+R+ + + + ++P Sbjct: 16 AKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRLRKEAGMASMSLPPA 71 Query: 77 GRTEKYGSRLFDPSVRLAADI--RDNEGR---VFARQGEVMNPLQYVPFNQTLYFINGDD 131 + Y D + L DI D G+ V +G NPL Y +T +NG Sbjct: 72 DKDRSY---YVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYADITETYVILNGKR 128 Query: 132 PAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191 A++ W + + ++ +G E+ + L R F + +R I+ + + Sbjct: 129 EAELQWFSKYYKDDYRAYPLITEGDAFEVAEKL-GRGVFKLDSQFRERFSIENTVSVIYE 187 Query: 192 VPGDRFLKVEFIPAEEGR 209 + ++V+ I ++ + Sbjct: 188 DFSRKMMRVDVIKVKDEK 205 >UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN Length = 527 Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGR---KMDAFKER 62 +A+L+ S A G L+ + EPD L I +R+ ++ E+ + K AFK Sbjct: 11 FVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELNKDREKWGAFK-- 66 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 VP + T++ +R P +++D +GR+ +G NPL +V Q Sbjct: 67 ---------GVP-LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQ 116 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVY-FDQNGVLCQRLG 181 L + + Q W+K + T II G + E+ + + + D+N L QRL Sbjct: 117 RLIIV---EKGQEDWLK--SIATESDMIIYASGDVIEVSQRIGRNAFILDKN--LQQRLD 169 Query: 182 IDQVPARVSAVPGDRFLKVEF 202 I VP+ + G+ + EF Sbjct: 170 IKVVPSIIQQ-EGEHLIIQEF 189 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI 298 7e-80 UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ... 246 3e-64 UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=... 245 6e-64 UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula... 245 7e-64 UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ... 239 4e-62 UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati... 239 5e-62 UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro... 235 5e-61 UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga... 234 1e-60 UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ... 234 1e-60 UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum... 234 2e-60 UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax... 234 2e-60 UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax... 233 3e-60 UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ... 232 8e-60 UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=... 231 1e-59 UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6... 229 4e-59 UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A... 229 4e-59 UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol... 227 2e-58 UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto... 227 2e-58 UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 225 6e-58 UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5... 225 7e-58 UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax... 225 9e-58 UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH 218 8e-56 UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=... 216 4e-55 UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ... 211 1e-53 UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ... 211 1e-53 UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T... 210 3e-53 UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket... 210 3e-53 UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ... 210 4e-53 UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C... 209 6e-53 UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea... 206 3e-52 UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=... 204 2e-51 UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_... 199 4e-50 UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_... 198 1e-49 UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ... 195 9e-49 UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ... 186 5e-46 UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax... 183 3e-45 UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu... 180 2e-44 UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax... 180 3e-44 UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=... 174 2e-42 UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba... 166 4e-40 UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob... 161 1e-38 UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro... 161 2e-38 UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta... 160 4e-38 UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU... 152 7e-36 UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo... 151 9e-36 UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari... 149 7e-35 UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob... 148 1e-34 UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX 144 2e-33 UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 143 3e-33 UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane... 135 7e-31 UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac... 122 1e-26 Sequences not found previously or not previously below threshold: UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 123 5e-27 UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomo... 109 6e-23 UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus... 107 2e-22 UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW... 74 4e-12 UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Perseph... 63 5e-09 UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus mar... 47 4e-04 UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia ts... 43 0.006 UniRef50_B8LDJ9 Predicted protein n=1 Tax=Thalassiosira pseudona... 40 0.050 >UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI Length = 210 Score = 298 bits (764), Expect = 7e-80, Method: Composition-based stats. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK Sbjct: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF Sbjct: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 >UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3 Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR Length = 206 Score = 246 bits (629), Expect = 3e-64, Method: Composition-based stats. Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 2/202 (0%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R L+ +L + A DLGT G L+P+ EPD+LT I QRL +++SGE+ R + Sbjct: 4 RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 RV +++RP V G+ K S +DP+ + IRD +G V AR G+ +NPL VP++ Sbjct: 64 RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 +TLYFI+GD+PAQ+ W+K+Q K+ILV+G+I + +LD VYFDQ G L + G Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183 Query: 182 IDQVPARVSAVPGDRFLKVEFI 203 + P RV+ DR+L+VE + Sbjct: 184 FEHTPVRVTRD--DRWLRVEEV 203 >UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9 Length = 203 Score = 245 bits (627), Expect = 6e-64, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ + LI L SV A D+GT+G L+P+ EPDM+ +I RL ++++GEM R + + Sbjct: 1 MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + V +++RPP V G+ + + LFDPS DI D G +G+ NPL ++PF Sbjct: 61 KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 TLYFINGD+PA++ W+K + ++ KIILV+GS+PE + LD +++FDQ GV+ R Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180 Query: 181 GIDQVPARVSAVPGDRFLKVE 201 GI PA V GD E Sbjct: 181 GITHTPAEVFQ-EGDMLRVKE 200 >UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN17_9PROT Length = 205 Score = 245 bits (626), Expect = 7e-64, Method: Composition-based stats. Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 2/204 (0%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R A L A DLG G ++PV EPD+ I +L LE +GE+ R + ++ Sbjct: 3 RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + ++ RP VPG+ RT+ DP++ + DI +G+V AR GE NPL YVP Sbjct: 63 RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122 Query: 122 QTLYFINGDDPAQVAWMK-RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 QTL F +GDD QVAW K R +ILV G + E+ + + +++FDQ G L R Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182 Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204 GI QVPARVS GD L E +P Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205 >UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2 Tax=Sphingomonadales RepID=A5VGR7_SPHWW Length = 217 Score = 239 bits (611), Expect = 4e-62, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 105/206 (50%), Gaps = 2/206 (0%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 C G L + G + A D GT G +P+ EPD+L I RL E SGE+ R F +R Sbjct: 13 CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 V RP V GI ++ S FDPSVR+ D+RD +G + A+ G+ +NPL +V +Q Sbjct: 73 VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L F++GD+ Q+ W + +++KII V+GS E R YFDQ G L R GI Sbjct: 133 DLVFVDGDNAEQLDWACGKY-SDVKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191 Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208 + PA VS G E Sbjct: 192 EHTPAVVSQ-AGRVMRVTEHALKGRA 216 >UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S166_SEROD Length = 208 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 1/194 (0%) Query: 8 ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67 ++ V AA+LG G L+P+ E DM+ I QRLTA+EQSGE+ + +ERV ++ Sbjct: 9 LIIGLTGPVYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKETEERVKEHA 68 Query: 68 LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127 +RP V G+ T++ + +DP+ + I D G V A +G+ +NPL + ++QTLYFI Sbjct: 69 VRPTPVDGLSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTITYDQTLYFI 128 Query: 128 NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 +GDD Q++W+ + K+ILV G++ + +LD VYFDQ+G L Q+ G VPA Sbjct: 129 DGDDKQQMSWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQKFGFKHVPA 188 Query: 188 RVSAVPGDRFLKVE 201 R+ AV GDR E Sbjct: 189 RI-AVEGDRMRIDE 201 >UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F366_9PROT Length = 228 Score = 235 bits (601), Expect = 5e-61, Method: Composition-based stats. Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 2/187 (1%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G +P++E D L I +RL+A+++SGE+ R + + RP V GI R Sbjct: 43 GDLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIERPKPVSGITR 102 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 TEK DP++ L IRD +GR+ G +NP ++ ++ L FI+GDD QVAW Sbjct: 103 TEKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDGDDKEQVAWA 162 Query: 139 KRQTPP-TLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRF 197 + K ILV+GS E+ K RVYFDQ GVL ++L I VPA VS G R Sbjct: 163 LTMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAIVSQ-DGKRL 221 Query: 198 LKVEFIP 204 E P Sbjct: 222 RVAEMAP 228 >UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms RepID=A2SNI4_METPP Length = 230 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 2/198 (1%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 L+ S A LG +G++W ++EPD + + +LT +E+ GE+ R + +++R + + Sbjct: 23 AVFLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYRDRYVAS 82 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNE-GRVFARQGEVMNPLQYVPFNQTLY 125 P + GI + R FDPSV D+ D G++ + G +NPL Y P + L Sbjct: 83 IENPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTPLTKALI 142 Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 FI+G DPAQVA+ K ++ K+ILV GS E+ + YFDQ G L R GI +V Sbjct: 143 FIDGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTRFGIKRV 202 Query: 186 PARVSAVPGDRFLKVEFI 203 PA VS G EF Sbjct: 203 PAVVSQ-KGRALQIEEFA 219 >UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO Length = 213 Score = 234 bits (597), Expect = 1e-60, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 3/203 (1%) Query: 8 ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67 AL+ + AD GT G ++ + E + L I ++L A+E++GE+ +K +R + ++ Sbjct: 12 ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71 Query: 68 LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127 P V GI + FDP++ L+ +I +EG + A G V+NPL + ++TL F Sbjct: 72 KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131 Query: 128 NGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186 +G+ QV ++R +LV G+ E+ K +VYFDQ G + R GI VP Sbjct: 132 DGNKKDQVEAVERLIKVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAVP 191 Query: 187 ARVSAVPGDRFLKVEFIPAEEGR 209 A V + L++ +PA+E + Sbjct: 192 AIVRQK--GKLLEITEMPAQELK 212 >UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS5_LEGPH Length = 202 Score = 234 bits (597), Expect = 2e-60, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 2/202 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ LI +++ A D G +G + + E D L I Q++ ++ +GE FK Sbjct: 1 MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +RV + RP + + R E + F+PS+ + D++D+ G+V +QG V+NPL V Sbjct: 61 KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 + TL F +GDD AQVAW+ ++ + K+IL GS+ E+ L +YFD NG L + Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179 Query: 181 GIDQVPARVSAVPGDRFLKVEF 202 I +PARV G R E Sbjct: 180 QIKYLPARVFQ-AGKRLQINEV 200 >UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANK9_BURGB Length = 212 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 3/209 (1%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R + A+++ + DLG G +P+ E D + ++ RL L+ SG + + Sbjct: 6 RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + + PAVPG+ +Y RL DP+V + + ++EG V G +NPL V + Sbjct: 66 RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTL-ESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 + L F +G DPAQV + K IL GS ++ KS +VYFDQ G L QR Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAVKPILTGGSWFDLTKSWKRQVYFDQQGRLTQRF 185 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 GI +VPA +S L+ E PA + R Sbjct: 186 GITRVPAVISQRGNQLLLEEE--PAAQLR 212 >UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms RepID=O85939_SPHAR Length = 231 Score = 233 bits (595), Expect = 3e-60, Method: Composition-based stats. Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 3/195 (1%) Query: 3 CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 GL L+ W + AAD G G +P+ E D+LT I RL LE +G + R + Sbjct: 10 ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 E+ + + RP V G+ LFDPS+ DI D +G + A +G +NPL V Sbjct: 70 EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +Q L F++GD+ A++AW + T +KII V GS + K R YFDQ G L + Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188 Query: 181 GIDQVPARVSAVPGD 195 GI PA VSA + Sbjct: 189 GIRHTPAVVSAAGAN 203 >UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0C0_9PROT Length = 214 Score = 232 bits (591), Expect = 8e-60, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 2/197 (1%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 + +L+ + DLG G + + E D++ +I +L +E++GE+ + + +K RVI Sbjct: 17 LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126 P +PGI T + +DPS+ DI D G++ +G +NPL Y+ +N+ L F Sbjct: 77 IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136 Query: 127 INGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 ++G D Q+ + K+ T + K++L+ G E+ + +YFDQ G L +R I QV Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196 Query: 186 PARVSAVPGDRFLKVEF 202 PA V G R E Sbjct: 197 PAIVRQ-EGKRLRIDEL 212 >UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ5_9ENTR Length = 198 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%) Query: 9 LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68 L+ + A ++GT+GD+W + E ++LTVI ++ + G + ++ERV +N+ Sbjct: 2 LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQVESA-FLGNEEKIHQEWRERVTKNAE 60 Query: 69 RPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFIN 128 RP V G+ + K +R FDPS + DIRD+ G VFA +G+ +NP PFN+TLYFI+ Sbjct: 61 RPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLYFID 120 Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 GDD Q+AW+ Q P T KIILV G+I ++L+ R+YFDQ GVL R GI+++P+ Sbjct: 121 GDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKLPSV 180 Query: 189 VSAVPGDRFLKVEFIPAE 206 V +P L++ + + Sbjct: 181 VDEMPNHSLLRITEVAVQ 198 >UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN Length = 212 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 2/200 (1%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 GL A DLG G +P+ E D+ VI +L +++SG+M + Sbjct: 11 AAGLAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAH 70 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 + RP V G+GRT+ S +DPS+ + DI D +G VFA G+ +NPL V Q Sbjct: 71 AAEKARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQ 130 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L FI+GD+ W Q +++KIILV+G+ ++ K+ D R+YFDQNG L + GI Sbjct: 131 KLIFIDGDNAKDFQWALDQGSE-VQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGI 189 Query: 183 DQVPARVSAVPGDRFLKVEF 202 + VPA V GD+ L E Sbjct: 190 ENVPAVVKQ-EGDKLLVREV 208 >UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4 Length = 209 Score = 229 bits (585), Expect = 4e-59, Method: Composition-based stats. Identities = 97/207 (46%), Positives = 135/207 (65%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 MR + L G AA+LGTWGDL+P+ EPDMLT I RL A+++SGE+ + +AFK Sbjct: 1 MRAACVYIALALGGQAHAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +RVI+NSLRP V G+ + + DP+ + D+ D+EGRVFAR+G+ +NPL VPF Sbjct: 61 QRVIKNSLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 QTL+FI+ DD Q+AWM+ Q P T K+ILV G I + + LD+R+YFDQ GVL Q+ Sbjct: 121 LQTLFFIDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKF 180 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEE 207 + VPA V A P + L+++ E+ Sbjct: 181 ALTAVPAAVHAAPNGKRLQIDTYALEQ 207 >UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales RepID=A0B4N9_BURCH Length = 213 Score = 227 bits (580), Expect = 2e-58, Method: Composition-based stats. Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 3/210 (1%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 + + L S A DLG G +P+ E D + ++ +RL L +G + + Sbjct: 6 VTWIAALTLAASPISAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRAR 65 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +R + + P VPGI +Y SRL DP+V A + ++EG V G +NPL V Sbjct: 66 QRALHDVTSLPPVPGISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTL 125 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 ++ L F +G DPAQV ++ + +S K IL GS ++ KS +VYFDQ G L QR Sbjct: 126 HERLVFFDGRDPAQVKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQR 185 Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 GI +VPA +S L+ E PAE+ R Sbjct: 186 FGITRVPAVISQRGNQLLLEEE--PAEQLR 213 >UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z4_ACIBC Length = 212 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 3/210 (1%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 + L+ +L + + DLG G ++ ++EPD L I +L ALE++GE+ RK Sbjct: 5 KYLFLLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVS 64 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + ++ P V I RLFDP++ L+ DI+ +EG V AR G +NPL V Sbjct: 65 RAMNSAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMT 124 Query: 122 QTLYFINGDDPAQVAWMKRQTP-PTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +TL G DP QV +K+ T ILV GS ++ ++ +VYFDQ G + +RL Sbjct: 125 KTLVLFKGSDPEQVQAVKKLTELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRL 184 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 I VP+ V + L++ +PA+E K Sbjct: 185 QITSVPSIVRQ--NGKMLEISEVPAKELVK 212 >UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4 Length = 212 Score = 225 bits (575), Expect = 6e-58, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 2 RCRGLIALLIWGQSVAA---ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 R R L AL + + A D G +G L+P+ EPD+L I+ RL +E SGE+ A Sbjct: 4 RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 +ER RP + E+Y + FDPS+ L D+ D++GRVFAR G V+NPL Y Sbjct: 64 MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 F + + I+GD QV + + L++ I++ +GS + ++ R +FDQ+ V+ Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182 Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 R G++++P+ + D L +E IP E + Sbjct: 183 RFGLERLPSVIKR--ADPILLIEEIPTGEAQ 211 >UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM Length = 211 Score = 225 bits (574), Expect = 7e-58, Method: Composition-based stats. Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 3/204 (1%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 LI L+I + A G G+++PV E L +I +RLTAL SG + + + Sbjct: 7 LILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAAE 66 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 ++ RP A+ + RT + + P + L+ DIRD GRV +G +N L +P Q + Sbjct: 67 HANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPCW 125 Query: 126 -FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184 F N DD AQ+ W + Q K+IL G+I +K L S +YFDQ G + ++L I Sbjct: 126 LFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRITH 185 Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208 VPA V+ G+R + VE E G Sbjct: 186 VPAIVTR-KGNRLVIVEHAIKENG 208 >UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX38_AZOSE Length = 211 Score = 225 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 4/202 (1%) Query: 4 RGLIALL--IWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 + L+A L + S +A +G T+G WP+ EPDM+ I + L+ +GEM F+ Sbjct: 9 KILLACLTALMCSSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQ 68 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 E + PP VPGI + + FDPSV + D+ D +GRV A+ G V NP Y+ Sbjct: 69 EETLATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIAL 128 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +++L FI+ D QV+ R ++++LV GS E+Q ++Y+DQ+G L Q Sbjct: 129 SKSLVFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHF 188 Query: 181 GIDQVPARVSAVPGDRFLKVEF 202 GI +VPA +S G + E Sbjct: 189 GIKRVPAVLSQ-DGMKIRVDEV 209 >UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH Length = 210 Score = 218 bits (557), Expect = 8e-56, Method: Composition-based stats. Identities = 77/185 (41%), Positives = 103/185 (55%), Gaps = 5/185 (2%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 D G G ++PV E D+L I RL +E+SGE + K R I RP V G+ R Sbjct: 22 RDYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIR 81 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 + S FDP++ LAADIR+ +G + G +NPL V L F++GDDPAQ+AW Sbjct: 82 AHESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWA 141 Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198 RQ P +K+ILV+G+ E+ K+ R YFDQ G L ++ GI VPARV R L Sbjct: 142 LRQDP---NAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARVRQ--NGRVL 196 Query: 199 KVEFI 203 +V I Sbjct: 197 EVSEI 201 >UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG1_9GAMM Length = 241 Score = 216 bits (550), Expect = 4e-55, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 13/206 (6%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 + LL + G G+L+P+ E DML I RLT LE +GE + F E V + Sbjct: 20 VTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVESVENS 79 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY--------- 117 RPP V G+ T + DPS++LA DI+D +G + +G V+NP Sbjct: 80 VRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWPIDIPK 139 Query: 118 --VPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175 ++ + F +GDDP Q AW K+ K L GS E+ D+R+YFDQ G Sbjct: 140 KSFDYSHVIVFFDGDDPRQRAWAKQYRADKP-IKWTLTNGSPEEVATEFDARIYFDQQGH 198 Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVE 201 ++ + +P+ + G R+ E Sbjct: 199 YSRQFQLSHIPSLIEQ-DGARWKITE 223 >UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella RepID=D1RMN6_LEGLO Length = 208 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 4/195 (2%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 V A +LG +G L+PV E D+ VIM +L LEQSG + + RV + RP + Sbjct: 18 VYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARVEDHLRRPKPL-H 76 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 + T + DPS+ + + ++G + A++G +NP + V F++TL+F + DD Q+ Sbjct: 77 LPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRKQL 136 Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGD 195 AW+K + K IL G + + L S VYFD G L + + VP+ VS Sbjct: 137 AWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVSQE--G 193 Query: 196 RFLKVEFIPAEEGRK 210 +++ I E RK Sbjct: 194 LVWRIQEIGQHELRK 208 >UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL Length = 210 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%) Query: 1 MRCRGLIALLIWGQ-SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59 +R IA+ I A DLG +G + + E D+L I+ +L E+ G + F Sbjct: 4 VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63 Query: 60 KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119 + + PP VPGI T K + L+DPS+ + +I D++GRVFAR+GE +NPL+ +P Sbjct: 64 ADATRKRVESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPLERLP 123 Query: 120 -FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQNGVL 176 +N+ L FI+G D QV + Q+ + + I LV GS ++ YFDQ G L Sbjct: 124 SYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQLGTL 183 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFI 203 + GI QVPA V+ G E Sbjct: 184 TTKFGITQVPATVTK-EGTALRVREVA 209 >UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 Tax=Betaproteobacteria RepID=A1W649_ACISJ Length = 212 Score = 210 bits (535), Expect = 3e-53, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 88/191 (46%), Gaps = 2/191 (1%) Query: 13 GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72 A DLG G + + EP +L +I QRL E+SGE+ R + R P Sbjct: 19 STPAGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAP 78 Query: 73 VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDP 132 V G+ T K + FDP+ L +I +G + G NPL V ++ L F + D Sbjct: 79 VAGVQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDS 138 Query: 133 AQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191 QV + + K IL GS ++ KS VY+DQ G+L +RLGI QVPA VS Sbjct: 139 RQVRQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVSQ 198 Query: 192 VPGDRFLKVEF 202 G R E Sbjct: 199 -EGKRLRIDEM 208 >UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia RepID=Q1RJF2_RICBR Length = 254 Score = 210 bits (534), Expect = 3e-53, Method: Composition-based stats. Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 7/190 (3%) Query: 14 QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73 + D G ++P+ E +L VIM +L +Q+G + + + FK +V + RP V Sbjct: 69 SKIEIRDYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPV 128 Query: 74 PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133 + + + +DPS D++D G + + G +NPL+ + + + L FI+GDD Sbjct: 129 LALAKASINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQ 188 Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 QV W K + K++L G+ ++ + L+ V+FDQ GVL R I VPA A Sbjct: 189 QVKWAKSKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPAI--ARQ 241 Query: 194 GDRFLKVEFI 203 + LK+ I Sbjct: 242 EGKLLKISEI 251 >UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6 Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8 Length = 234 Score = 210 bits (534), Expect = 4e-53, Method: Composition-based stats. Identities = 68/205 (33%), Positives = 96/205 (46%), Gaps = 18/205 (8%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 AA +GT G ++P+ E DML I RL LE++GE+ + F+E V RP V G+ Sbjct: 19 AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-------------VPFNQTL 124 T+ L DP++ LA DI D G + +G +NP F++TL Sbjct: 78 TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137 Query: 125 YFINGDDPAQVAWMKRQTPPTLES---KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 F +GDD QV W K + K IL G + LD+RVYFDQ G L + L Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTIKWILTGGEPETLHVQLDARVYFDQQGNLSRALT 197 Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206 + +VP+ V G + E + Sbjct: 198 LKRVPSVVKQ-EGVMWQVREMDVSN 221 >UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW Length = 210 Score = 209 bits (532), Expect = 6e-53, Method: Composition-based stats. Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 6/206 (2%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 G++ +L+ S+ A +LG +G ++E D+L + MQ+ L + + M + Sbjct: 5 LTGILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSH 63 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 ++ +P + GIG+T+ Y FDPS+ + DI ++ ++ ++G +NPL V +Q Sbjct: 64 LLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQ 123 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L F++ D Q+AW + P K ILV+G ++++ L +YFDQ GVL ++ GI Sbjct: 124 DLLFVDATDTEQLAWAQALYPS---GKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI 180 Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208 VPARVS G R LK+E IP E Sbjct: 181 QSVPARVSQ-EGLR-LKIELIPIGES 204 >UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae RepID=A5CD93_ORITB Length = 219 Score = 206 bits (525), Expect = 3e-52, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 5/180 (2%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 V D GT G ++P+ E +L VIM +L A +SG + + F+E++ + +RP V Sbjct: 35 GVEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVK 94 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 + + + +R++D + DI+ G + R+G +NPL+ + + + L I+GDD Q Sbjct: 95 NLSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQ 154 Query: 135 VAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPG 194 VAW+K + KI+LV G+ E+ L ++FDQ G+L ++ I VPA + Sbjct: 155 VAWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPAIIEQENN 209 >UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T1_LISDA Length = 256 Score = 204 bits (519), Expect = 2e-51, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 18/212 (8%) Query: 13 GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72 A +LGT +P+ E DML IM RL E +GE+ + D F ERV ++++RP Sbjct: 18 FSPAYAKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTP 77 Query: 73 VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN----------- 121 V G+ T + DP++ LA DI+D G+V +G +NP + Sbjct: 78 VEGLTTTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLS 137 Query: 122 QTLYFINGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175 + L F++GDD Q+ + K + L+ K ILV+G ++Q L +VYFDQ G Sbjct: 138 KILVFLDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGN 197 Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVEFIPAEE 207 + +R I + + + G R+ EF ++E Sbjct: 198 ITKRFDIKHI-STTAKQAGTRWEVKEFDVSQE 228 >UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM Length = 205 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 4/204 (1%) Query: 1 MRCRGLIALLIWGQSVAAA--DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 M+ + L ++ V +LG G +PV E L I+ L ++G + Sbjct: 1 MKVILSVLLAVFTSFVLGDELNLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEK 60 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 KE V RPP + + T++Y R +D + + DI EG + A+ G+ +NPL + Sbjct: 61 KKEAVKSFLERPPGIK-LPTTDEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFK 119 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 + F N DD Q AW+++ ++SK I V GS+ + +S RV+FDQ G L Sbjct: 120 RMTKQYCFFNMDDKMQRAWIEQNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVD 179 Query: 179 RLGIDQVPARVSAVPGDRFLKVEF 202 R I VPA V + G++ E+ Sbjct: 180 RFDIRHVPAIVRQI-GNKIYVEEY 202 >UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2 Length = 218 Score = 198 bits (504), Expect = 1e-49, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 G+ + + G +P+ E + I RL A + SG++ ++R Sbjct: 17 ATGISSWVAASTPSVEKVGDKIGTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDR 76 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 + R++L + G+ + K R FDPS L I D +G++ A G V+ PL+ P Sbjct: 77 INRSALNLQPLEGLAKATKGSVRYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPF 136 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 ++F +G +P Q+ K+ ES IL G+ E+ +D VY+DQ G + + Sbjct: 137 KMFFFDGREPDQIELAKKLAAEYGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQ 196 Query: 182 IDQVPARVSAVPGDRFLKVEFIP 204 +++VP+ VS G R P Sbjct: 197 LNEVPSLVSQ-EGGRLRVEVMKP 218 >UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK Length = 213 Score = 195 bits (496), Expect = 9e-49, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 19/215 (8%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ + +L+ SV D G G + V E +++I RL+ L+ + + + + Sbjct: 1 MKLILGLVILVLSSSVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMR 56 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + L P V GI T + +DPS L DI+ +G++ + G +NPL ++ F Sbjct: 57 RIAKQQILEPAPVLGIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVF 116 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDS 166 ++ L FI+G QV W+K + T E +IILV G I E+Q+ + Sbjct: 117 DRELIFIDGRSQKQVEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGR 176 Query: 167 RVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVE 201 +YFDQ G L + GI+QVPA V G + E Sbjct: 177 TLYFDQGGELTNKFGIEQVPAIVVQ-DGKKLKISE 210 >UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU3_9VIBR Length = 213 Score = 186 bits (472), Expect = 5e-46, Method: Composition-based stats. Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 ++ L+ S+ AA+ G + + E D+ I QRL LE G + + ++R+ Sbjct: 6 VLVLVGAVCSLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQRDRIRD 65 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQ--------- 116 +P V + T+ + L DPSVRL A +G+ G +NP Sbjct: 66 QFEQPMPVS-LSATQSPTTFLVDPSVRLPATY---DGQ---PPGRWVNPFDASTWPSPPL 118 Query: 117 --YVPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNG 174 + + L F +G D Q W + T IL G + ++L++ VYFDQ G Sbjct: 119 GMTYHYPRALVFFDGRDRKQRRWATQFTADRP-ITWILTGGRPQTLARTLNAPVYFDQGG 177 Query: 175 VLCQRLGIDQVPARVSAVPGDRFLKVEF 202 L ++L + VP+ V V R+ +V Sbjct: 178 YLSRKLRLRSVPSVV--VQAHRYWEVTE 203 >UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales RepID=A1AKL5_PELPD Length = 218 Score = 183 bits (466), Expect = 3e-45, Method: Composition-based stats. Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 13/209 (6%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 I LL+ S A +LG +G + + E D L I +R ++ + + R Sbjct: 7 LAAIVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWHKVLDK-------RK 59 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 + N PP + R ++ S D + D+ D +G + +G NPL YV + +T Sbjct: 60 VENFQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKT 119 Query: 124 LYFINGDDPAQVAW-MKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L I+G DP QV W + L+ ++L +G + + K + + F + + +RL + Sbjct: 120 LVVIDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRISRPL-FYADRKIIERLKL 178 Query: 183 DQVPARVSAVPGDRFLKVEFI--PAEEGR 209 VP+ V R ++V + PA + Sbjct: 179 KAVPSVVRQK--GRVMEVTEVKLPAGHAK 205 >UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ6_SYNAS Length = 277 Score = 180 bits (458), Expect = 2e-44, Method: Composition-based stats. Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 7/198 (3%) Query: 14 QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73 Q+ ADLG G +PV E D L+ I +R A++ G+ D + R + RP + Sbjct: 83 QAAVCADLGNIGATYPVVERDALSEIEERAKAVDW----GKAFDPKRTRERIQNYRPEGM 138 Query: 74 PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133 + +K D S L DI D G + +G NPL +V L I+G + Sbjct: 139 EALPAAKKDRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGNER 198 Query: 134 QVAWMKRQTPPTLESKIILVQGSIPE-MQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192 Q+ W K + ++L+ G + + L F + + +R + VPA + Sbjct: 199 QIEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPA-FYADARIVKRFQLKAVPAVIVQ- 256 Query: 193 PGDRFLKVEFIPAEEGRK 210 G E+ ++G+K Sbjct: 257 KGTVMEVREYALDDKGQK 274 >UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q5_PELPD Length = 200 Score = 180 bits (457), Expect = 3e-44, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ A++I A G + + E D L + +R+ + + Sbjct: 1 MKHLLFAAIIIAHTCNAIGSEIVTGMTYQISERDALEELEERVQKADWKKHI-------- 52 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + + N RP + + R L D S + +DI +N+G + +G NPL ++ F Sbjct: 53 QSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKGELLYPKGYTFNPLDFISF 112 Query: 121 NQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 +TL INGDDP QV W K + + + L QG K L VY+ L R Sbjct: 113 EKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTSKDLARPVYYATKP-LVAR 171 Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 + VP+ V A R ++VE I G+ Sbjct: 172 FQLRSVPSVVKA--SGRCMEVEEIFINGGK 199 >UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL Length = 237 Score = 174 bits (442), Expect = 2e-42, Method: Composition-based stats. Identities = 76/130 (58%), Positives = 92/130 (70%) Query: 17 AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76 A D G G+++PV EPDML + QR +L SG ++MDAF +RV RNS RP V GI Sbjct: 1 MAKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGI 60 Query: 77 GRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA 136 G++ Y R FDPSV L D++D +GRVFARQGEV+NPL VPF QTLYFI+GDD QVA Sbjct: 61 GKSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVA 120 Query: 137 WMKRQTPPTL 146 WM+RQ P TL Sbjct: 121 WMQRQRPQTL 130 >UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter RepID=Q4HP76_CAMUP Length = 248 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 10/202 (4%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 +++ LI+ + LG ++ P E DM+ +I + + ++ E+ + + +E+ Sbjct: 6 ASFILSTLIYAGNTKELSLG---EVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQ 60 Query: 63 VIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 N +P + + + D + L DI+D G+V ++G NP YV Sbjct: 61 AKENVIQYKPKGLTPLTPALEDRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANYVKI 120 Query: 121 NQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 + L I+G + +V W K+ L K++L GS E+ K L V F + + Sbjct: 121 SYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEV-FYLMPQIKDK 179 Query: 180 LGIDQVPARVSAVPGDRFLKVE 201 I++ P+ ++ ++ E Sbjct: 180 FKIEKTPSIITQ-ESNKIKVSE 200 >UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F048_9HELI Length = 219 Score = 161 bits (409), Expect = 1e-38, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%) Query: 1 MRCRGLIALLIWGQSVAAAD-LGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59 M+ LI L D + G + KE D+L +I + LT E+ +K+ Sbjct: 1 MKKLFLILSLSASLFAKETDNILNLGKTYEFKERDILELIQEHLTK--NRPELEQKLLGQ 58 Query: 60 KERVIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY 117 ++++ N RP + + K + D + L DI+D+EG + QG NP +Y Sbjct: 59 RDKLKENIKNWRPKDMVKLTPAPKNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKY 118 Query: 118 VPFNQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVL 176 + + IN +D ++ W+++ T+ +I L +GS EM + Y+ + Sbjct: 119 ARLSYGIVVINANDKEELEWLEKGGYLNTIAYRIFLSEGSYYEMIQKHKQDFYYLL-PEI 177 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEF 202 +R + P+ + G+ + E Sbjct: 178 AKRFQLKHTPSIIKQ-EGEEIIIQEV 202 >UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHD8_9BACT Length = 216 Score = 161 bits (407), Expect = 2e-38, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 12/211 (5%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 R ++ + + A DLGT+G + + E D++T I +R + + RK +A K+R+ Sbjct: 2 RVFFIMIAFVVPLFAKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRL 57 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIR--DNEGR---VFARQGEVMNPLQYV 118 + + A + +K S D + L DI D G+ V +G NPL Y Sbjct: 58 RKEA--GMASMSLPPADKDRSYYVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYA 115 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 +T +NG A++ W + + ++ +G E+ + L V F + + Sbjct: 116 DITETYVILNGKREAELQWFSKYYKDDYRAYPLITEGDAFEVAEKLGRGV-FKLDSQFRE 174 Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 R I+ + + + ++V+ I ++ + Sbjct: 175 RFSIENTVSVIYEDFSRKMMRVDVIKVKDEK 205 >UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU20_BURM1 Length = 222 Score = 160 bits (404), Expect = 4e-38, Method: Composition-based stats. Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 + +A + A DLGT +P+ + D I +QSGE+ +++ Sbjct: 6 KLLIGLAASLQLSISYAEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRD 64 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R I + PP++ GI + + L + ++ D RD+ G+V R+G V+ PL+ +P Sbjct: 65 RTIESIKNPPSL-GIATSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLT 123 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL---------DSRVYFDQ 172 L FI+G D QV + R++ + KI+L GS ++ YFDQ Sbjct: 124 NGLLFIDGTDARQVEYAIRRS-QSERLKIVLTAGSPYALRVKYAKVPWHGGTGVPFYFDQ 182 Query: 173 NGVLCQRL------GIDQVPARVSAVPGDRFLKV 200 ++ L I+ VPA + GDR Sbjct: 183 RRMIISTLSKLYNIQINSVPAAIFQ-QGDRLAVQ 215 >UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN Length = 527 Score = 152 bits (385), Expect = 7e-36, Method: Composition-based stats. Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 18/199 (9%) Query: 6 LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65 +A+L+ S A G L+ + EPD L I +R+ ++ E+ K+R Sbjct: 11 FVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELN------KDREKW 62 Query: 66 NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125 + + + T++ +R P +++D +GR+ +G NPL +V Q L Sbjct: 63 GAFKGVP---LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQRLI 119 Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 + + Q W+K + T II G + E+ + + F + L QRL I V Sbjct: 120 IV---EKGQEDWLK--SIATESDMIIYASGDVIEVSQRIGRNA-FILDKNLQQRLDIKVV 173 Query: 186 PARVSAVPGDRFLKVEFIP 204 P+ + G+ + EF Sbjct: 174 PSIIQQ-EGEHLIIQEFSK 191 >UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR9_PSEPU Length = 412 Score = 151 bits (383), Expect = 9e-36, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 21/195 (10%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLGT G + EPD++ V QR+ L+ R + F + + + Sbjct: 217 GDLGTIGSTQEIIEPDLMEVAKQRIAELDTDAMKKRAIARFWDNHKGH--------PLPP 268 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 + +RL DPSV + DI D++GRV + G +NPL +PF+Q L I+ P QVA Sbjct: 269 VTESATRLVDPSVIVPDDILDSQGRVVQKAG-RINPLDMMPFDQKLVVIDPTQPWQVALA 327 Query: 139 KRQTPPTLESKIILVQGS----------IPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 KR+ E+ + V + +Q SLD+ +Y + +R I + P+ Sbjct: 328 KREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYL-LPPDMAERFQILRAPSV 386 Query: 189 VSAVPGDRFLKVEFI 203 V+A + F+ E Sbjct: 387 VTA-DTENFIVREVA 400 >UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris RepID=Q8L272_PROVU Length = 416 Score = 149 bits (376), Expect = 7e-35, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G + E +L +I Q++ L+ +D + ++ Sbjct: 226 GDLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEFTDF--------PP 277 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 K+ + +PSV + DI +G+V A+QG +NPL +PF L F + Q Sbjct: 278 ALKHNQKFINPSVVIPQDILAPDGQVVAKQG-RINPLDVIPFRLKLIFFDARIDWQRKIA 336 Query: 139 KRQTPP-TLESKIILVQGS-----IPEMQKSL-----DSRVYFDQNGVLCQRLGIDQVPA 187 +R+ + IL+ + Q + SR+Y Q G + R GI VP+ Sbjct: 337 RREYQNAEPGIEPILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGITSVPS 395 Query: 188 RVSAVPGDRFLKVEFIPAEEGRK 210 V+A D+ + P +E K Sbjct: 396 IVTAT--DKQYVINEYPEDEANK 416 >UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria RepID=C6YK86_VIBCH Length = 406 Score = 148 bits (373), Expect = 1e-34, Method: Composition-based stats. Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 22/200 (11%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 LG G + + EPD++ V MQRL +L+ + A K++ I + + Sbjct: 211 GSLGQRGPIHSILEPDLMQVAMQRLQSLD--------LGALKKKAIERFWSRQTFTDLPK 262 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA-- 136 +Y R DP++ + + D GR G +NPL+ +PF Q L N + +V Sbjct: 263 ATQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAV 322 Query: 137 --WMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 W++ Q +I Q S+ ++K+LDS VY N L QR + P+ Sbjct: 323 AHWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPS 381 Query: 188 RVSAVPGDRFLKVEFIPAEE 207 V G F ++E IPA+E Sbjct: 382 FV-QAKGLAF-EIEEIPAKE 399 >UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX Length = 421 Score = 144 bits (363), Expect = 2e-33, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 32/212 (15%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G + + EPD++ V +RL ++ + + ++ F + N + R Sbjct: 220 GDLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFN--------ELPR 271 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFING 129 K +R DPSV + +DI +G VFA G+V+NPL PF Q + + Sbjct: 272 APKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDP 331 Query: 130 DDPAQVAWMKRQTPP-TLESKIILVQG------------SIPEMQKSLDSRVYFDQNGVL 176 D Q+ + ++ P LE + + S + + D+ VY L Sbjct: 332 LDKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDL 390 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208 R ++ P+ ++A G +F+ E Sbjct: 391 ITRFELEHTPSVITAR-GKKFVVRELAEEGGE 421 >UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 Length = 503 Score = 143 bits (362), Expect = 3e-33, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 20/194 (10%) Query: 23 TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82 G ++PV+E ++ + +R + G K+R + ++ + + + +++ Sbjct: 307 VAGTIYPVEEKSIIKELEERAQKYDWEG--------AKKRAVADTWKNQWMVDLPPAQEH 358 Query: 83 GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142 L DP+VR+ D++D +GRV A GE++NPL P N T+ + +P Q+ W ++Q Sbjct: 359 KEFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQY 418 Query: 143 PPTLESKIILVQ----------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192 L S ++ + ++++ + +V F N + R I PA ++ Sbjct: 419 RQRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-T 476 Query: 193 PGDRFLKVEFIPAE 206 D+F F AE Sbjct: 477 DQDKFRITLFSEAE 490 >UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2Z3_SHESA Length = 431 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 17/187 (9%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 + LG D + + E DML +I Q+L ++ + + F R Sbjct: 225 SGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTE-------S 277 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137 ++ DP VR D +G+ FA+ G+V++P + L+ I+ Q+AW Sbjct: 278 LKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQLAW 337 Query: 138 MKRQTPPTLESKIILVQGSIPE---------MQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 M T ++ ++ ++P +Q L R+Y Q + R ++ +PA Sbjct: 338 MNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHLPAL 396 Query: 189 VSAVPGD 195 V G+ Sbjct: 397 VDLFKGE 403 >UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEJ2_9ENTR Length = 437 Score = 123 bits (308), Expect = 5e-27, Method: Composition-based stats. Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 22/195 (11%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G V E +++ + + + L+ G + +D + R + Sbjct: 245 GDLGVAGPAVGVVEKNLIDELQESVAKLDFDGMKKKAIDNYWPRQVFQEF--------PE 296 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 K +R DP+V + +I G + A++G NPL +PF L F + + Q + Sbjct: 297 ATKRTTRTIDPTVIIPQNITSPNGDIVAKRG-RFNPLTVMPFTIKLIFFDAREEWQRQFA 355 Query: 139 KRQTPPTLES-KIILVQGSIP--------EMQKSLD--SRVYFDQNGVLCQRLGIDQVPA 187 + Q T S ILV ++ + +K +R+Y Q G + +R G+ VP+ Sbjct: 356 RYQFEHTPASLTPILVTTNVYGDGWQTFRDTKKEYGDFARLYMIQPG-MAERYGLINVPS 414 Query: 188 RVSAVPGDRFLKVEF 202 V+A RF+ E+ Sbjct: 415 IVTA-DSKRFINDEY 428 >UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J843_ACIF2 Length = 422 Score = 122 bits (306), Expect = 1e-26, Method: Composition-based stats. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 15/176 (8%) Query: 23 TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82 G W V EP+M+++ Q++ + ++ KER N + + Sbjct: 234 IHGHTWKVAEPNMISIFEQKIKTFNW----KKTVEQAKERGWENMSTRLG-DALPDSLHG 288 Query: 83 GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--LYFINGDDPAQVAWMKR 140 S ++PS+ A IR G+V R+G+ +NPL PF T N QV + Sbjct: 289 KSYTYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVFNPAQAWQV--AQV 346 Query: 141 QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARVS 190 Q + ++++ +P+ + D V Q+ V L RLGI++VPA + Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALIQ 402 >UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT0_9SPHN Length = 211 Score = 109 bits (273), Expect = 6e-23, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 18/200 (9%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 ++AL +AA T G WP+ EPD + ++ R Sbjct: 18 ALMLALACHEPGLAATS--TIGRTWPIAEPDAMAE------IEARAARAPSLALRLGPRS 69 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 ++L+ +G+T R P + DIR +GR+ +G NPL YV Q Sbjct: 70 TWSALQAAP---LGQTRVDRVRSLVPFYTVEEDIRLPDGRLLYPKGFTFNPLDYVSLPQR 126 Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183 L ++ D + W +Q I+L G ++ + + F + +RLG+ Sbjct: 127 LVIVHPRD---LGWALKQ--ARFTDFILLTAGDALDLSERSGRPL-FILEERVKERLGLT 180 Query: 184 QVPARVSAVPGDRFLKVEFI 203 P V+ G + + E+ Sbjct: 181 VAPVIVAQ-QGKKLVLTEYA 199 >UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TFF4_RICCO Length = 239 Score = 107 bits (268), Expect = 2e-22, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 16/188 (8%) Query: 17 AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76 A D G ++WP+ E D+ ++++ ++ S ++ ++ + S R + Sbjct: 18 YAKDYGVQANVWPITEIDIRRLLLESAARVDWSKVNSEAQESGRQYLSNLSKRQ-----L 72 Query: 77 GRTEKYGSRLFDPSVRLAADI----RDNEG----RVFARQGEVMNPLQYVPFNQTLYFIN 128 + FDPS+ L +DI + +G +V +G +NPL + Sbjct: 73 PTIDHSAVSYFDPSIVLTSDIQAPVKQADGTYQWQVLYPKGTKVNPLDTARPVTAFLMFD 132 Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGS--IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186 G P QVA +K+ + + + GS + ++ S VY + + R ++ +P Sbjct: 133 GSQPEQVALVKKVLARSGDRIEAVEAGSGDLSQLGDSFTQTVY-HADDAMIARFQVNYLP 191 Query: 187 ARVSAVPG 194 + V G Sbjct: 192 SLVFPGTG 199 >UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW n=1 Tax=Arsenophonus nasoniae RepID=D2U0Q6_9ENTR Length = 312 Score = 73.8 bits (180), Expect = 4e-12, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLGT G + E +ML +I + + L+ + K+ I + + Sbjct: 220 GDLGTQGPAKSIVERNMLDLIKEGIDNLD--------FERMKKEAIERYWKNKKIYKFPV 271 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQG 109 + DPSV + DI G V A++G Sbjct: 272 ATENSVHYVDPSVVIPEDIISPNGAVVAKKG 302 >UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUV3_PERMH Length = 203 Score = 63.4 bits (153), Expect = 5e-09, Method: Composition-based stats. Identities = 36/208 (17%), Positives = 86/208 (41%), Gaps = 19/208 (9%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 ++L + G + +LGT+G ++ + ++++ + + + +R Sbjct: 6 SIFLSLGLIGFGYSLENLGTFGKVYQ-------IEEEDIIEYIKKNAKPPKFSREYIQRK 58 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 I + + + ++ R + DI EG++ A++G +N L+ + + T Sbjct: 59 IHAAAQVD--VNLPVNKRDNVRYEKIIYTVPNDII-IEGKLIAKKGTKINVLKEIKLHNT 115 Query: 124 LYFI-NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL-DSRVYFDQNGVLCQRLG 181 + + P + W K+ + ++ QG+I ++QK D R+Y VL L Sbjct: 116 YVILADYMLPYFLDWNKK-----TNAVYLITQGNILDLQKKYPDLRIYAGFPKVLSS-LK 169 Query: 182 IDQVPARVSAVPGDRFLKVEFIPAEEGR 209 + +P+ V D+ + +E + + Sbjct: 170 VKSIPSIVYQYQ-DKLVILEKGFPNDKK 196 >UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LHC5_9ALVE Length = 940 Score = 47.2 bits (111), Expect = 4e-04, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 1/91 (1%) Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 ER + R + + + R D +A ++D G+ Q E +NP Sbjct: 429 ERRGFGANREYLIQQLTAAQADLQRHKDAFRTIAQSLKDRRGQPLNPQAEFINPRSAKQI 488 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKII 151 Q L F N D+P + W+ R+ E++ I Sbjct: 489 RQ-LLFGNPDEPDHLRWVARRVRAGEEAEWI 518 >UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia tsutsugamushi str. Boryong RepID=A5CF18_ORITB Length = 50 Score = 42.9 bits (100), Expect = 0.006, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 19/40 (47%) Query: 152 LVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191 LV G+ E+ L V+FDQ G L + I + A + Sbjct: 2 LVNGNHIELNNLLGRHVFFDQFGFLSMKFKIQDMLAIIKE 41 >UniRef50_B8LDJ9 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8LDJ9_THAPS Length = 254 Score = 40.2 bits (93), Expect = 0.050, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 23 TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 T G+ WP E D L ++ A+ ++ R+ ++ V R A+ Sbjct: 194 THGNTWPYSEEDALEETKKK-KAMNRADAWDRRQTQRRDWVHEKIERGKALSNST 247 Searching..................................................done Results from round 3 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI 269 3e-71 UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=... 241 1e-62 UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula... 241 1e-62 UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ... 239 5e-62 UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ... 239 6e-62 UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati... 237 2e-61 UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum... 236 4e-61 UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro... 235 9e-61 UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ... 234 2e-60 UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga... 232 5e-60 UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ... 232 6e-60 UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax... 231 1e-59 UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax... 228 8e-59 UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6... 228 1e-58 UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto... 228 1e-58 UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol... 227 2e-58 UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=... 225 8e-58 UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax... 225 9e-58 UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A... 224 1e-57 UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID... 217 3e-55 UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5... 216 5e-55 UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T... 214 1e-54 UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH 214 1e-54 UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=... 213 3e-54 UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ... 211 1e-53 UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ... 210 2e-53 UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ... 209 4e-53 UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket... 207 3e-52 UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C... 207 3e-52 UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_... 205 5e-52 UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea... 204 1e-51 UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=... 199 4e-50 UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_... 199 5e-50 UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ... 195 8e-49 UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax... 193 2e-48 UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax... 189 5e-47 UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu... 184 2e-45 UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ... 182 5e-45 UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob... 171 1e-41 UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba... 170 2e-41 UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta... 168 9e-41 UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro... 166 4e-40 UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=... 166 4e-40 UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo... 165 9e-40 UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU... 163 3e-39 UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari... 157 2e-37 UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob... 151 2e-35 UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp.... 148 9e-35 UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX 148 1e-34 UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 147 3e-34 UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomo... 141 1e-32 UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane... 141 1e-32 UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus... 135 7e-31 UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac... 125 8e-28 UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Perseph... 120 5e-26 UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW... 84 3e-15 UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus mar... 82 1e-14 Sequences not found previously or not previously below threshold: UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia ts... 42 0.010 UniRef50_A0NRL0 Putative uncharacterized protein n=1 Tax=Labrenz... 41 0.033 CONVERGED! >UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI Length = 210 Score = 269 bits (689), Expect = 3e-71, Method: Composition-based stats. Identities = 210/210 (100%), Positives = 210/210 (100%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK Sbjct: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF Sbjct: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 >UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9 Length = 203 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 1/201 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ + LI L SV A D+GT+G L+P+ EPDM+ +I RL ++++GEM R + + Sbjct: 1 MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + V +++RPP V G+ + + LFDPS DI D G +G+ NPL ++PF Sbjct: 61 KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 TLYFINGD+PA++ W+K + ++ KIILV+GS+PE + LD +++FDQ GV+ R Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180 Query: 181 GIDQVPARVSAVPGDRFLKVE 201 GI PA V GD E Sbjct: 181 GITHTPAEVFQ-EGDMLRVKE 200 >UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VN17_9PROT Length = 205 Score = 241 bits (616), Expect = 1e-62, Method: Composition-based stats. Identities = 81/204 (39%), Positives = 111/204 (54%), Gaps = 2/204 (0%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R A L A DLG G ++PV EPD+ I +L LE +GE+ R + ++ Sbjct: 3 RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + ++ RP VPG+ RT+ DP++ + DI +G+V AR GE NPL YVP Sbjct: 63 RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 QTL F +GDD QVAW K + +ILV G + E+ + + +++FDQ G L R Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182 Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204 GI QVPARVS GD L E +P Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205 >UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3 Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR Length = 206 Score = 239 bits (610), Expect = 5e-62, Method: Composition-based stats. Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 2/205 (0%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R L+ +L + A DLGT G L+P+ EPD+LT I QRL +++SGE+ R + Sbjct: 4 RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 RV +++RP V G+ K S +DP+ + IRD +G V AR G+ +NPL VP++ Sbjct: 64 RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 +TLYFI+GD+PAQ+ W+K+Q K+ILV+G+I + +LD VYFDQ G L + G Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183 Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206 + P RV+ DR+L+VE + + Sbjct: 184 FEHTPVRVTRD--DRWLRVEEVALK 206 >UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2 Tax=Sphingomonadales RepID=A5VGR7_SPHWW Length = 217 Score = 239 bits (609), Expect = 6e-62, Method: Composition-based stats. Identities = 77/206 (37%), Positives = 105/206 (50%), Gaps = 2/206 (0%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 C G L + G + A D GT G +P+ EPD+L I RL E SGE+ R F +R Sbjct: 13 CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 V RP V GI ++ S FDPSVR+ D+RD +G + A+ G+ +NPL +V +Q Sbjct: 73 VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L F++GD+ Q+ W + +++KII V+GS E R YFDQ G L R GI Sbjct: 133 DLVFVDGDNAEQLDWACGKYSD-VKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191 Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208 + PA VS G E Sbjct: 192 EHTPAVVSQA-GRVMRVTEHALKGRA 216 >UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13 RepID=D1S166_SEROD Length = 208 Score = 237 bits (604), Expect = 2e-61, Method: Composition-based stats. Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 2/202 (0%) Query: 1 MRCR-GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59 M+ + ++ V AA+LG G L+P+ E DM+ I QRLTA+EQSGE+ + Sbjct: 1 MKLAWVMGLIIGLTGPVYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKET 60 Query: 60 KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119 +ERV +++RP V G+ T++ + +DP+ + I D G V A +G+ +NPL + Sbjct: 61 EERVKEHAVRPTPVDGLSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTIT 120 Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 ++QTLYFI+GDD Q++W+ + K+ILV G++ + +LD VYFDQ+G L Q+ Sbjct: 121 YDQTLYFIDGDDKQQMSWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQK 180 Query: 180 LGIDQVPARVSAVPGDRFLKVE 201 G VPAR+ AV GDR E Sbjct: 181 FGFKHVPARI-AVEGDRMRIDE 201 >UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZTS5_LEGPH Length = 202 Score = 236 bits (602), Expect = 4e-61, Method: Composition-based stats. Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 2/202 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ LI +++ A D G +G + + E D L I Q++ ++ +GE FK Sbjct: 1 MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +RV + RP + + R E + F+PS+ + D++D+ G+V +QG V+NPL V Sbjct: 61 KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 + TL F +GDD AQVAW+ ++ + K+IL GS+ E+ L +YFD NG L + Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179 Query: 181 GIDQVPARVSAVPGDRFLKVEF 202 I +PARV G R E Sbjct: 180 QIKYLPARVFQA-GKRLQINEV 200 >UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F366_9PROT Length = 228 Score = 235 bits (599), Expect = 9e-61, Method: Composition-based stats. Identities = 74/196 (37%), Positives = 102/196 (52%), Gaps = 2/196 (1%) Query: 10 LIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLR 69 ++ DLG G +P++E D L I +RL+A+++SGE+ R + + R Sbjct: 34 ILASVQNDRGDLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIER 93 Query: 70 PPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFING 129 P V GI RTEK DP++ L IRD +GR+ G +NP ++ ++ L FI+G Sbjct: 94 PKPVSGITRTEKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDG 153 Query: 130 DDPAQVAWMKRQTPP-TLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 DD QVAW + K ILV+GS E+ K RVYFDQ GVL ++L I VPA Sbjct: 154 DDKEQVAWALTMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAI 213 Query: 189 VSAVPGDRFLKVEFIP 204 VS G R E P Sbjct: 214 VSQ-DGKRLRVAEMAP 228 >UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO Length = 213 Score = 234 bits (596), Expect = 2e-60, Method: Composition-based stats. Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 3/203 (1%) Query: 8 ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67 AL+ + AD GT G ++ + E + L I ++L A+E++GE+ +K +R + ++ Sbjct: 12 ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71 Query: 68 LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127 P V GI + FDP++ L+ +I +EG + A G V+NPL + ++TL F Sbjct: 72 KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131 Query: 128 NGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186 +G+ QV ++R +LV G+ E+ K +VYFDQ G + R GI VP Sbjct: 132 DGNKKDQVEAVERLIKVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAVP 191 Query: 187 ARVSAVPGDRFLKVEFIPAEEGR 209 A V + L++ +PA+E + Sbjct: 192 AIVRQK--GKLLEITEMPAQELK 212 >UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms RepID=A2SNI4_METPP Length = 230 Score = 232 bits (593), Expect = 5e-60, Method: Composition-based stats. Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 2/204 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 + L+ S A LG +G++W ++EPD + + +LT +E+ GE+ R + ++ Sbjct: 17 VTAVHAAVFLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYR 76 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNE-GRVFARQGEVMNPLQYVP 119 +R + + P + GI + R FDPSV D+ D G++ + G +NPL Y P Sbjct: 77 DRYVASIENPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTP 136 Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 + L FI+G DPAQVA+ K ++ K+ILV GS E+ + YFDQ G L R Sbjct: 137 LTKALIFIDGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTR 196 Query: 180 LGIDQVPARVSAVPGDRFLKVEFI 203 GI +VPA VS G EF Sbjct: 197 FGIKRVPAVVSQ-KGRALQIEEFA 219 >UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V0C0_9PROT Length = 214 Score = 232 bits (592), Expect = 6e-60, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 2/197 (1%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 + +L+ + DLG G + + E D++ +I +L +E++GE+ + + +K RVI Sbjct: 17 LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126 P +PGI T + +DPS+ DI D G++ +G +NPL Y+ +N+ L F Sbjct: 77 IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136 Query: 127 INGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185 ++G D Q+ + K+ T + K++L+ G E+ + +YFDQ G L +R I QV Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196 Query: 186 PARVSAVPGDRFLKVEF 202 PA V G R E Sbjct: 197 PAIVRQ-EGKRLRIDEL 212 >UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia glumae BGR1 RepID=C5ANK9_BURGB Length = 212 Score = 231 bits (590), Expect = 1e-59, Method: Composition-based stats. Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 3/209 (1%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 R + A+++ + DLG G +P+ E D + ++ RL L+ SG + + Sbjct: 6 RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + + PAVPG+ +Y RL DP+V + + ++EG V G +NPL V + Sbjct: 66 RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 + L F +G DPAQV + + K IL GS ++ KS +VYFDQ G L QR Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAVKPILTGGSWFDLTKSWKRQVYFDQQGRLTQRF 185 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 GI +VPA +S L+ E PA + R Sbjct: 186 GITRVPAVISQRGNQLLLEEE--PAAQLR 212 >UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms RepID=O85939_SPHAR Length = 231 Score = 228 bits (582), Expect = 8e-59, Method: Composition-based stats. Identities = 73/202 (36%), Positives = 100/202 (49%), Gaps = 4/202 (1%) Query: 3 CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 GL L+ W + AAD G G +P+ E D+LT I RL LE +G + R + Sbjct: 10 ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 E+ + + RP V G+ LFDPS+ DI D +G + A +G +NPL V Sbjct: 70 EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +Q L F++GD+ A++AW + T +KII V GS + K R YFDQ G L + Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188 Query: 181 GIDQVPARVSAVPGDRFLKVEF 202 GI PA VSA G E Sbjct: 189 GIRHTPAVVSAA-GANLKISEV 209 >UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN Length = 212 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 2/200 (1%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 GL A DLG G +P+ E D+ VI +L +++SG+M + Sbjct: 11 AAGLAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAH 70 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 + RP V G+GRT+ S +DPS+ + DI D +G VFA G+ +NPL V Q Sbjct: 71 AAEKARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQ 130 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L FI+GD+ W Q +++KIILV+G+ ++ K+ D R+YFDQNG L + GI Sbjct: 131 KLIFIDGDNAKDFQWALDQGSE-VQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGI 189 Query: 183 DQVPARVSAVPGDRFLKVEF 202 + VPA V GD+ L E Sbjct: 190 ENVPAVVKQ-EGDKLLVREV 208 >UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii ACICU RepID=B2I3Z4_ACIBC Length = 212 Score = 228 bits (581), Expect = 1e-58, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 3/210 (1%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 + L+ +L + + DLG G ++ ++EPD L I +L ALE++GE+ RK Sbjct: 5 KYLFLLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVS 64 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R + ++ P V I RLFDP++ L+ DI+ +EG V AR G +NPL V Sbjct: 65 RAMNSAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMT 124 Query: 122 QTLYFINGDDPAQVAWMKRQTP-PTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +TL G DP QV +K+ T ILV GS ++ ++ +VYFDQ G + +RL Sbjct: 125 KTLVLFKGSDPEQVQAVKKLTELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRL 184 Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210 I VP+ V + L++ +PA+E K Sbjct: 185 QITSVPSIVRQ--NGKMLEISEVPAKELVK 212 >UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales RepID=A0B4N9_BURCH Length = 213 Score = 227 bits (579), Expect = 2e-58, Method: Composition-based stats. Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 3/210 (1%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 + + L S A DLG G +P+ E D + ++ +RL L +G + + Sbjct: 6 VTWIAALTLAASPISAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRAR 65 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +R + + P VPGI +Y SRL DP+V A + ++EG V G +NPL V Sbjct: 66 QRALHDVTSLPPVPGISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTL 125 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 ++ L F +G DPAQV ++ + + K IL GS ++ KS +VYFDQ G L QR Sbjct: 126 HERLVFFDGRDPAQVKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQR 185 Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 GI +VPA +S L+ E PAE+ R Sbjct: 186 FGITRVPAVISQRGNQLLLEEE--PAEQLR 213 >UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus nasoniae RepID=D2TZZ5_9ENTR Length = 198 Score = 225 bits (574), Expect = 8e-58, Method: Composition-based stats. Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%) Query: 9 LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68 L+ + A ++GT+GD+W + E ++LTVI ++ + G + ++ERV +N+ Sbjct: 2 LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQVESA-FLGNEEKIHQEWRERVTKNAE 60 Query: 69 RPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFIN 128 RP V G+ + K +R FDPS + DIRD+ G VFA +G+ +NP PFN+TLYFI+ Sbjct: 61 RPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLYFID 120 Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 GDD Q+AW+ Q P T KIILV G+I ++L+ R+YFDQ GVL R GI+++P+ Sbjct: 121 GDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKLPSV 180 Query: 189 VSAVPGDRFLKVEFIPAE 206 V +P L++ + + Sbjct: 181 VDEMPNHSLLRITEVAVQ 198 >UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum aromaticum EbN1 RepID=Q5NX38_AZOSE Length = 211 Score = 225 bits (573), Expect = 9e-58, Method: Composition-based stats. Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 2/202 (0%) Query: 2 RCRGLIALLIWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 + + S +A +G T+G WP+ EPDM+ I + L+ +GEM F+ Sbjct: 9 KILLACLTALMCSSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQ 68 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 E + PP VPGI + + FDPSV + D+ D +GRV A+ G V NP Y+ Sbjct: 69 EETLATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIAL 128 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 +++L FI+ D QV+ R ++++LV GS E+Q ++Y+DQ+G L Q Sbjct: 129 SKSLVFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHF 188 Query: 181 GIDQVPARVSAVPGDRFLKVEF 202 GI +VPA +S G + E Sbjct: 189 GIKRVPAVLSQ-DGMKIRVDEV 209 >UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4 Length = 209 Score = 224 bits (572), Expect = 1e-57, Method: Composition-based stats. Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 1/207 (0%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 MR + L G AA+LGTWGDL+P+ EPDMLT I RL A+++SGE+ + +AFK Sbjct: 1 MRAACVYIALALGGQAHAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFK 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +RVI+NSLRP V G+ + + DP+ + D+ D+EGRVFAR+G+ +NPL VPF Sbjct: 61 QRVIKNSLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPF 120 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180 QTL+FI+ DD Q+AWM+ Q P T K+ILV G I + + LD+R+YFDQ GVL Q+ Sbjct: 121 LQTLFFIDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKF 180 Query: 181 GID-QVPARVSAVPGDRFLKVEFIPAE 206 + A +A G R + + Sbjct: 181 ALTAVPAAVHAAPNGKRLQIDTYALEQ 207 >UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4 Length = 212 Score = 217 bits (552), Expect = 3e-55, Method: Composition-based stats. Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%) Query: 2 RCRGLIALLIWGQSVAA---ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 R R L AL + + A D G +G L+P+ EPD+L I+ RL +E SGE+ A Sbjct: 4 RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 +ER RP + E+Y + FDPS+ L D+ D++GRVFAR G V+NPL Y Sbjct: 64 MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 F + + I+GD QV + + L++ I++ +GS + ++ R +FDQ+ V+ Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182 Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 R G++++P+ + D L +E IP E + Sbjct: 183 RFGLERLPSVIKRA--DPILLIEEIPTGEAQ 211 >UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM Length = 211 Score = 216 bits (550), Expect = 5e-55, Method: Composition-based stats. Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 3/205 (1%) Query: 5 GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64 LI L+I + A G G+++PV E L +I +RLTAL SG + + + Sbjct: 6 CLILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAA 65 Query: 65 RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124 ++ RP A+ + RT + + P + L+ DIRD GRV +G +N L +P Q Sbjct: 66 EHANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPC 124 Query: 125 -YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183 F N DD AQ+ W + Q K+IL G+I +K L S +YFDQ G + ++L I Sbjct: 125 WLFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRIT 184 Query: 184 QVPARVSAVPGDRFLKVEFIPAEEG 208 VPA V+ G+R + VE E G Sbjct: 185 HVPAIVTR-KGNRLVIVEHAIKENG 208 >UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 Tax=Betaproteobacteria RepID=A1W649_ACISJ Length = 212 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 88/191 (46%), Gaps = 2/191 (1%) Query: 13 GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72 A DLG G + + EP +L +I QRL E+SGE+ R + R P Sbjct: 19 STPAGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAP 78 Query: 73 VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDP 132 V G+ T K + FDP+ L +I +G + G NPL V ++ L F + D Sbjct: 79 VAGVQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDS 138 Query: 133 AQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191 QV + + K IL GS ++ KS VY+DQ G+L +RLGI QVPA VS Sbjct: 139 RQVRQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVSQ 198 Query: 192 VPGDRFLKVEF 202 G R E Sbjct: 199 -EGKRLRIDEM 208 >UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH Length = 210 Score = 214 bits (546), Expect = 1e-54, Method: Composition-based stats. Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 4/192 (2%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 D G G ++PV E D+L I RL +E+SGE + K R I RP V G+ R Sbjct: 22 RDYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIR 81 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 + S FDP++ LAADIR+ +G + G +NPL V L F++GDDPAQ+AW Sbjct: 82 AHESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWA 141 Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198 RQ +K+ILV+G+ E+ K+ R YFDQ G L ++ GI VPARV G Sbjct: 142 LRQ---DPNAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARVRQ-NGRVLE 197 Query: 199 KVEFIPAEEGRK 210 E K Sbjct: 198 VSEIALPPRKAK 209 >UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales bacterium SWAT-3 RepID=A5KZG1_9GAMM Length = 241 Score = 213 bits (543), Expect = 3e-54, Method: Composition-based stats. Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 13/206 (6%) Query: 7 IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66 + LL + G G+L+P+ E DML I RLT LE +GE + F E V + Sbjct: 20 VTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVESVENS 79 Query: 67 SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY--------- 117 RPP V G+ T + DPS++LA DI+D +G + +G V+NP Sbjct: 80 VRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWPIDIPK 139 Query: 118 --VPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175 ++ + F +GDDP Q AW K+ K L GS E+ D+R+YFDQ G Sbjct: 140 KSFDYSHVIVFFDGDDPRQRAWAKQYRADKP-IKWTLTNGSPEEVATEFDARIYFDQQGH 198 Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVE 201 ++ + +P+ + G R+ E Sbjct: 199 YSRQFQLSHIPSLIEQ-DGARWKITE 223 >UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1 Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL Length = 210 Score = 211 bits (538), Expect = 1e-53, Method: Composition-based stats. Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%) Query: 1 MRCRGLIALLIWGQ-SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59 +R IA+ I A DLG +G + + E D+L I+ +L E+ G + F Sbjct: 4 VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63 Query: 60 KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119 + + PP VPGI T K + L+DPS+ + +I D++GRVFAR+GE +NPL+ +P Sbjct: 64 ADATRKRVESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPLERLP 123 Query: 120 -FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQNGVL 176 +N+ L FI+G D QV + Q+ + + I LV GS ++ YFDQ G L Sbjct: 124 SYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQLGTL 183 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFI 203 + GI QVPA V+ G E Sbjct: 184 TTKFGITQVPATVT-KEGTALRVREVA 209 >UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6 Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8 Length = 234 Score = 210 bits (535), Expect = 2e-53, Method: Composition-based stats. Identities = 67/205 (32%), Positives = 95/205 (46%), Gaps = 18/205 (8%) Query: 18 AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77 AA +GT G ++P+ E DML I RL LE++GE+ + F+E V RP V G+ Sbjct: 19 AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77 Query: 78 RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN-------------QTL 124 T+ L DP++ LA DI D G + +G +NP + +TL Sbjct: 78 TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137 Query: 125 YFINGDDPAQVAWMKRQTPPTLES---KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 F +GDD QV W K + K IL G + LD+RVYFDQ G L + L Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTIKWILTGGEPETLHVQLDARVYFDQQGNLSRALT 197 Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206 + +VP+ V G + E + Sbjct: 198 LKRVPSVVKQ-EGVMWQVREMDVSN 221 >UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella RepID=D1RMN6_LEGLO Length = 208 Score = 209 bits (533), Expect = 4e-53, Method: Composition-based stats. Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 4/197 (2%) Query: 14 QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73 V A +LG +G L+PV E D+ VIM +L LEQSG + + RV + RP + Sbjct: 16 TPVYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARVEDHLRRPKPL 75 Query: 74 PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133 + T + DPS+ + + ++G + A++G +NP + V F++TL+F + DD Sbjct: 76 -HLPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRK 134 Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 Q+AW+K + K IL G + + L S VYFD G L + + VP+ VS Sbjct: 135 QLAWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVSQ-E 192 Query: 194 GDRFLKVEFIPAEEGRK 210 G + E I E RK Sbjct: 193 GLVWRIQE-IGQHELRK 208 >UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia RepID=Q1RJF2_RICBR Length = 254 Score = 207 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 6/188 (3%) Query: 14 QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73 + D G ++P+ E +L VIM +L +Q+G + + + FK +V + RP V Sbjct: 69 SKIEIRDYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPV 128 Query: 74 PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133 + + + +DPS D++D G + + G +NPL+ + + + L FI+GDD Sbjct: 129 LALAKASINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQ 188 Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 QV W K + K++L G+ ++ + L+ V+FDQ GVL R I VPA Sbjct: 189 QVKWAKSKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPAIARQ-E 242 Query: 194 GDRFLKVE 201 G E Sbjct: 243 GKLLKISE 250 >UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW Length = 210 Score = 207 bits (526), Expect = 3e-52, Method: Composition-based stats. Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 6/206 (2%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 G++ +L+ S+ A +LG +G ++E D+L + MQ+ L + + M + Sbjct: 5 LTGILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSH 63 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 ++ +P + GIG+T+ Y FDPS+ + DI ++ ++ ++G +NPL V +Q Sbjct: 64 LLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQ 123 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L F++ D Q+AW + P K ILV+G ++++ L +YFDQ GVL ++ GI Sbjct: 124 DLLFVDATDTEQLAWAQALYPS---GKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI 180 Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208 VPARVS G R E IP E Sbjct: 181 QSVPARVSQ-EGLRLKI-ELIPIGES 204 >UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2 Length = 218 Score = 205 bits (523), Expect = 5e-52, Method: Composition-based stats. Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 G+ + + G +P+ E + I RL A + SG++ ++R Sbjct: 17 ATGISSWVAASTPSVEKVGDKIGTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDR 76 Query: 63 VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122 + R++L + G+ + K R FDPS L I D +G++ A G V+ PL+ P Sbjct: 77 INRSALNLQPLEGLAKATKGSVRYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPF 136 Query: 123 TLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181 ++F +G +P Q+ K+ ES IL G+ E+ +D VY+DQ G + + Sbjct: 137 KMFFFDGREPDQIELAKKLAAEYGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQ 196 Query: 182 IDQVPARVSAVPGDRFLKVEFIP 204 +++VP+ VS G R P Sbjct: 197 LNEVPSLVSQ-EGGRLRVEVMKP 218 >UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae RepID=A5CD93_ORITB Length = 219 Score = 204 bits (520), Expect = 1e-51, Method: Composition-based stats. Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 6/189 (3%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 V D GT G ++P+ E +L VIM +L A +SG + + F+E++ + +RP V Sbjct: 35 GVEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVK 94 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 + + + +R++D + DI+ G + R+G +NPL+ + + + L I+GDD Q Sbjct: 95 NLSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQ 154 Query: 135 VAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPG 194 VAW+K + KI+LV G+ E+ L ++FDQ G+L ++ I VPA + Sbjct: 155 VAWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPAIIEQ-EN 208 Query: 195 DRFLKVEFI 203 + E Sbjct: 209 NVLKISEVS 217 >UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2 Tax=Photobacterium damselae subsp. damselae CIP 102761 RepID=D0Z4T1_LISDA Length = 256 Score = 199 bits (507), Expect = 4e-50, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 18/212 (8%) Query: 13 GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72 A +LGT +P+ E DML IM RL E +GE+ + D F ERV ++++RP Sbjct: 18 FSPAYAKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTP 77 Query: 73 VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--------- 123 V G+ T + DP++ LA DI+D G+V +G +NP + Sbjct: 78 VEGLTTTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLS 137 Query: 124 --LYFINGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175 L F++GDD Q+ + K + L+ K ILV+G ++Q L +VYFDQ G Sbjct: 138 KILVFLDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGN 197 Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVEFIPAEE 207 + +R I + + + G R+ EF ++E Sbjct: 198 ITKRFDIKHI-STTAKQAGTRWEVKEFDVSQE 228 >UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM Length = 205 Score = 199 bits (507), Expect = 5e-50, Method: Composition-based stats. Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 4/204 (1%) Query: 1 MRCRGLIALLIWGQSVAAA--DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 M+ + L ++ V +LG G +PV E L I+ L ++G + Sbjct: 1 MKVILSVLLAVFTSFVLGDELNLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEK 60 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 KE V RPP + + T++Y R +D + + DI EG + A+ G+ +NPL + Sbjct: 61 KKEAVKSFLERPPGIK-LPTTDEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFK 119 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 + F N DD Q AW+++ ++SK I V GS+ + +S RV+FDQ G L Sbjct: 120 RMTKQYCFFNMDDKMQRAWIEQNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVD 179 Query: 179 RLGIDQVPARVSAVPGDRFLKVEF 202 R I VPA V + G++ E+ Sbjct: 180 RFDIRHVPAIVRQI-GNKIYVEEY 202 >UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK Length = 213 Score = 195 bits (496), Expect = 8e-49, Method: Composition-based stats. Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 19/215 (8%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ + +L+ SV D G G + V E +++I RL+ L+ + + + + Sbjct: 1 MKLILGLVILVLSSSVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMR 56 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + L P V GI T + +DPS L DI+ +G++ + G +NPL ++ F Sbjct: 57 RIAKQQILEPAPVLGIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVF 116 Query: 121 NQTLYFINGDDPAQVAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDS 166 ++ L FI+G QV W+K + T E +IILV G I E+Q+ + Sbjct: 117 DRELIFIDGRSQKQVEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGR 176 Query: 167 RVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVE 201 +YFDQ G L + GI+QVPA V G + E Sbjct: 177 TLYFDQGGELTNKFGIEQVPAIVVQ-DGKKLKISE 210 >UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7Q5_PELPD Length = 200 Score = 193 bits (492), Expect = 2e-48, Method: Composition-based stats. Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M+ A++I A G + + E D L + +R+ + + Sbjct: 1 MKHLLFAAIIIAHTCNAIGSEIVTGMTYQISERDALEELEERVQKADWKKHI-------- 52 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 + + N RP + + R L D S + +DI +N+G + +G NPL ++ F Sbjct: 53 QSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKGELLYPKGYTFNPLDFISF 112 Query: 121 NQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 +TL INGDDP QV W K + + + L QG K L VY+ L R Sbjct: 113 EKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTSKDLARPVYYATKP-LVAR 171 Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 + VP+ V A R ++VE I G+ Sbjct: 172 FQLRSVPSVVKA--SGRCMEVEEIFINGGK 199 >UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales RepID=A1AKL5_PELPD Length = 218 Score = 189 bits (481), Expect = 5e-47, Method: Composition-based stats. Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 11/208 (5%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 I LL+ S A +LG +G + + E D L I +R ++ + + R Sbjct: 7 LAAIVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWHKVLDK-------RK 59 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 + N PP + R ++ S D + D+ D +G + +G NPL YV + +T Sbjct: 60 VENFQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKT 119 Query: 124 LYFINGDDPAQVAW-MKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182 L I+G DP QV W + L+ ++L +G + + K + + F + + +RL + Sbjct: 120 LVVIDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRISRPL-FYADRKIIERLKL 178 Query: 183 DQVPARVSAVPGDRFLKVEF-IPAEEGR 209 VP+ V G E +PA + Sbjct: 179 KAVPSVVRQ-KGRVMEVTEVKLPAGHAK 205 >UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ6_SYNAS Length = 277 Score = 184 bits (467), Expect = 2e-45, Method: Composition-based stats. Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 7/197 (3%) Query: 15 SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74 + ADLG G +PV E D L+ I +R A++ G+ D + R + RP + Sbjct: 84 AAVCADLGNIGATYPVVERDALSEIEERAKAVDW----GKAFDPKRTRERIQNYRPEGME 139 Query: 75 GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134 + +K D S L DI D G + +G NPL +V L I+G + Q Sbjct: 140 ALPAAKKDRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGNERQ 199 Query: 135 VAWMKRQTPPTLESKIILVQGSIPE-MQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193 + W K + ++L+ G + + L F + + +R + VPA + Sbjct: 200 IEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPA-FYADARIVKRFQLKAVPAVIVQ-K 257 Query: 194 GDRFLKVEFIPAEEGRK 210 G E+ ++G+K Sbjct: 258 GTVMEVREYALDDKGQK 274 >UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NPU3_9VIBR Length = 213 Score = 182 bits (463), Expect = 5e-45, Method: Composition-based stats. Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 21/213 (9%) Query: 1 MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60 M ++ L+ S+ AA+ G + + E D+ I QRL LE G + + + Sbjct: 1 MSRWCVLVLVGAVCSLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQR 60 Query: 61 ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 +R+ +P V + T+ + L DPSVRL A +G+ G +NP + Sbjct: 61 DRIRDQFEQPMPVS-LSATQSPTTFLVDPSVRLPATY---DGQ---PPGRWVNPFDASTW 113 Query: 121 -----------NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVY 169 + L F +G D Q W + T IL G + ++L++ VY Sbjct: 114 PSPPLGMTYHYPRALVFFDGRDRKQRRWATQFTADRP-ITWILTGGRPQTLARTLNAPVY 172 Query: 170 FDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF 202 FDQ G L ++L + VP+ V R+ +V Sbjct: 173 FDQGGYLSRKLRLRSVPSVVVQA--HRYWEVTE 203 >UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F048_9HELI Length = 219 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%) Query: 1 MRCRGLIALLIWGQSVAAAD-LGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59 M+ LI L D + G + KE D+L +I + LT E+ +K+ Sbjct: 1 MKKLFLILSLSASLFAKETDNILNLGKTYEFKERDILELIQEHLTK--NRPELEQKLLGQ 58 Query: 60 KERVIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY 117 ++++ N RP + + K + D + L DI+D+EG + QG NP +Y Sbjct: 59 RDKLKENIKNWRPKDMVKLTPAPKNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKY 118 Query: 118 VPFNQTLYFINGDDPAQVAWMKR-QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVL 176 + + IN +D ++ W+++ T+ +I L +GS EM + Y+ + Sbjct: 119 ARLSYGIVVINANDKEELEWLEKGGYLNTIAYRIFLSEGSYYEMIQKHKQDFYYLL-PEI 177 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEF 202 +R + P+ + G+ + E Sbjct: 178 AKRFQLKHTPSIIKQ-EGEEIIIQEV 202 >UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter RepID=Q4HP76_CAMUP Length = 248 Score = 170 bits (432), Expect = 2e-41, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 10/202 (4%) Query: 3 CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62 +++ LI+ + L G++ P E DM+ +I + + ++ E+ + + +E+ Sbjct: 6 ASFILSTLIYAGNTKELSL---GEVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQ 60 Query: 63 VIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120 N +P + + + D + L DI+D G+V ++G NP YV Sbjct: 61 AKENVIQYKPKGLTPLTPALEDRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANYVKI 120 Query: 121 NQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179 + L I+G + +V W K+ L K++L GS E+ K L V F + + Sbjct: 121 SYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEV-FYLMPQIKDK 179 Query: 180 LGIDQVPARVSAVPGDRFLKVE 201 I++ P+ ++ ++ E Sbjct: 180 FKIEKTPSIITQ-ESNKIKVSE 200 >UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia multivorans ATCC 17616 RepID=A9AU20_BURM1 Length = 222 Score = 168 bits (427), Expect = 9e-41, Method: Composition-based stats. Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 19/214 (8%) Query: 2 RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61 + +A + A DLGT +P+ + D I +QSGE+ +++ Sbjct: 6 KLLIGLAASLQLSISYAEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRD 64 Query: 62 RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121 R I + P GI + + L + ++ D RD+ G+V R+G V+ PL+ +P Sbjct: 65 RTIESIKNP-PSLGIATSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLT 123 Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL---------DSRVYFDQ 172 L FI+G D QV + R++ + KI+L GS ++ YFDQ Sbjct: 124 NGLLFIDGTDARQVEYAIRRS-QSERLKIVLTAGSPYALRVKYAKVPWHGGTGVPFYFDQ 182 Query: 173 NGVLCQRL------GIDQVPARVSAVPGDRFLKV 200 ++ L I+ VPA + GDR Sbjct: 183 RRMIISTLSKLYNIQINSVPAAIFQ-QGDRLAVQ 215 >UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus DSM 12809 RepID=C1SHD8_9BACT Length = 216 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 12/211 (5%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 R ++ + + A DLGT+G + + E D++T I +R + + RK +A K+R+ Sbjct: 2 RVFFIMIAFVVPLFAKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRL 57 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIR--DNEGR---VFARQGEVMNPLQYV 118 + + A + +K S D + L DI D G+ V +G NPL Y Sbjct: 58 RKEA--GMASMSLPPADKDRSYYVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYA 115 Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178 +T +NG A++ W + + ++ +G E+ + L V F + + Sbjct: 116 DITETYVILNGKREAELQWFSKYYKDDYRAYPLITEGDAFEVAEKLGRGV-FKLDSQFRE 174 Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 R I+ + + + ++V+ I ++ + Sbjct: 175 RFSIENTVSVIYEDFSRKMMRVDVIKVKDEK 205 >UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL Length = 237 Score = 166 bits (421), Expect = 4e-40, Method: Composition-based stats. Identities = 76/130 (58%), Positives = 92/130 (70%) Query: 17 AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76 A D G G+++PV EPDML + QR +L SG ++MDAF +RV RNS RP V GI Sbjct: 1 MAKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGI 60 Query: 77 GRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA 136 G++ Y R FDPSV L D++D +GRVFARQGEV+NPL VPF QTLYFI+GDD QVA Sbjct: 61 GKSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVA 120 Query: 137 WMKRQTPPTL 146 WM+RQ P TL Sbjct: 121 WMQRQRPQTL 130 >UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas RepID=B7XGR9_PSEPU Length = 412 Score = 165 bits (418), Expect = 9e-40, Method: Composition-based stats. Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 21/195 (10%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLGT G + EPD++ V QR+ L+ R + F + + + Sbjct: 217 GDLGTIGSTQEIIEPDLMEVAKQRIAELDTDAMKKRAIARFWDNHKGH--------PLPP 268 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 + +RL DPSV + DI D++GRV + G +NPL +PF+Q L I+ P QVA Sbjct: 269 VTESATRLVDPSVIVPDDILDSQGRVVQKAG-RINPLDMMPFDQKLVVIDPTQPWQVALA 327 Query: 139 KRQTPPTLESKIILVQGS----------IPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188 KR+ E+ + V + +Q SLD+ +Y + +R I + P+ Sbjct: 328 KREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYL-LPPDMAERFQILRAPSV 386 Query: 189 VSAVPGDRFLKVEFI 203 V+A + F+ E Sbjct: 387 VTA-DTENFIVREVA 400 >UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN Length = 527 Score = 163 bits (413), Expect = 3e-39, Method: Composition-based stats. Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 18/203 (8%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 +A+L+ S A G L+ + EPD L I +R+ ++ E+ + +R Sbjct: 9 AFFVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELNK------DRE 60 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 + + + T++ +R P +++D +GR+ +G NPL +V Q Sbjct: 61 KWGAFKGVP---LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQR 117 Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183 L + + Q W+K + II G + E+ + + F + L QRL I Sbjct: 118 LIIV---EKGQEDWLKSIATESD--MIIYASGDVIEVSQRIGRNA-FILDKNLQQRLDIK 171 Query: 184 QVPARVSAVPGDRFLKVEFIPAE 206 VP+ + G+ + EF Sbjct: 172 VVPSIIQQ-EGEHLIIQEFSKQH 193 >UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris RepID=Q8L272_PROVU Length = 416 Score = 157 bits (398), Expect = 2e-37, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G + E +L +I Q++ L+ +D + ++ Sbjct: 226 GDLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEF--------TDFPP 277 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 K+ + +PSV + DI +G+V A+QG +NPL +PF L F + Q Sbjct: 278 ALKHNQKFINPSVVIPQDILAPDGQVVAKQG-RINPLDVIPFRLKLIFFDARIDWQRKIA 336 Query: 139 KRQTPP-TLESKIILVQGS-----IPEMQKSL-----DSRVYFDQNGVLCQRLGIDQVPA 187 +R+ + IL+ + Q + SR+Y Q G + R GI VP+ Sbjct: 337 RREYQNAEPGIEPILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGITSVPS 395 Query: 188 RVSAVPGDRFLKVEFIPAEEGRK 210 V+A D+ + P +E K Sbjct: 396 IVTAT--DKQYVINEYPEDEANK 416 >UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria RepID=C6YK86_VIBCH Length = 406 Score = 151 bits (381), Expect = 2e-35, Method: Composition-based stats. Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 22/201 (10%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 LG G + + EPD++ V MQRL +L+ + ++ F R + + Sbjct: 211 GSLGQRGPIHSILEPDLMQVAMQRLQSLDLGALKKKAIERFWSRQTF--------TDLPK 262 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA-- 136 +Y R DP++ + + D GR G +NPL+ +PF Q L N + +V Sbjct: 263 ATQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAV 322 Query: 137 --WMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187 W++ Q +I Q S+ ++K+LDS VY N L QR + P+ Sbjct: 323 AHWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPS 381 Query: 188 RVSAVPGDRFLKVEFIPAEEG 208 V G F ++E IPA+E Sbjct: 382 FV-QAKGLAF-EIEEIPAKEL 400 >UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1MEJ2_9ENTR Length = 437 Score = 148 bits (375), Expect = 9e-35, Method: Composition-based stats. Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 22/196 (11%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G V E +++ + + + L+ G + +D + R + Sbjct: 245 GDLGVAGPAVGVVEKNLIDELQESVAKLDFDGMKKKAIDNYWPRQVFQ--------EFPE 296 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138 K +R DP+V + +I G + A++G NPL +PF L F + + Q + Sbjct: 297 ATKRTTRTIDPTVIIPQNITSPNGDIVAKRG-RFNPLTVMPFTIKLIFFDAREEWQRQFA 355 Query: 139 KRQTPPTLES-KIILVQGSIP--------EMQKSLD--SRVYFDQNGVLCQRLGIDQVPA 187 + Q T S ILV ++ + +K +R+Y Q G + +R G+ VP+ Sbjct: 356 RYQFEHTPASLTPILVTTNVYGDGWQTFRDTKKEYGDFARLYMIQPG-MAERYGLINVPS 414 Query: 188 RVSAVPGDRFLKVEFI 203 V+A RF+ E+ Sbjct: 415 IVTA-DSKRFINDEYS 429 >UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX Length = 421 Score = 148 bits (374), Expect = 1e-34, Method: Composition-based stats. Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 32/212 (15%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLG G + + EPD++ V +RL ++ + + ++ F + N + R Sbjct: 220 GDLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFN--------ELPR 271 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFING 129 K +R DPSV + +DI +G VFA G+V+NPL PF Q + + Sbjct: 272 APKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDP 331 Query: 130 DDPAQVAWMKRQTPP------TLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVL 176 D Q+ + ++ P I + S + + D+ VY L Sbjct: 332 LDKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDL 390 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208 R ++ P+ ++A G +F+ E Sbjct: 391 ITRFELEHTPSVITAR-GKKFVVRELAEEGGE 421 >UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1 Length = 503 Score = 147 bits (371), Expect = 3e-34, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 20/194 (10%) Query: 23 TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82 G ++PV+E ++ + +R + G K+R + ++ + + + +++ Sbjct: 307 VAGTIYPVEEKSIIKELEERAQKYDWEG--------AKKRAVADTWKNQWMVDLPPAQEH 358 Query: 83 GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142 L DP+VR+ D++D +GRV A GE++NPL P N T+ + +P Q+ W ++Q Sbjct: 359 KEFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQY 418 Query: 143 PPTLESKIILVQ----------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192 L S ++ + ++++ + +V F N + R I PA ++ Sbjct: 419 RQRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-T 476 Query: 193 PGDRFLKVEFIPAE 206 D+F F AE Sbjct: 477 DQDKFRITLFSEAE 490 >UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NGT0_9SPHN Length = 211 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 18/200 (9%) Query: 4 RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63 ++AL +AA T G WP+ EPD + ++ R Sbjct: 18 ALMLALACHEPGLAATS--TIGRTWPIAEPDAMA------EIEARAARAPSLALRLGPRS 69 Query: 64 IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123 ++L+ +G+T R P + DIR +GR+ +G NPL YV Q Sbjct: 70 TWSALQAAP---LGQTRVDRVRSLVPFYTVEEDIRLPDGRLLYPKGFTFNPLDYVSLPQR 126 Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183 L ++ D + W +Q T I+L G ++ + + F + +RLG+ Sbjct: 127 LVIVHPRD---LGWALKQARFTD--FILLTAGDALDLSERSGRPL-FILEERVKERLGLT 180 Query: 184 QVPARVSAVPGDRFLKVEFI 203 P V+ G + + E+ Sbjct: 181 VAPVIVAQ-QGKKLVLTEYA 199 >UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3 RepID=A0L2Z3_SHESA Length = 431 Score = 141 bits (356), Expect = 1e-32, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 18/195 (9%) Query: 16 VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75 + + LG D + + E DML +I Q+L ++ + + F R Sbjct: 223 LQSGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTE------ 276 Query: 76 IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135 ++ DP VR D +G+ FA+ G+V++P + L+ I+ Q+ Sbjct: 277 -SLKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQL 335 Query: 136 AWMKRQTPPTLESKII-----LVQGS----IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186 AWM T ++ L GS +Q L R+Y Q + R ++ +P Sbjct: 336 AWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHLP 394 Query: 187 ARVSAVPGDRFLKVE 201 A V G+ E Sbjct: 395 ALVDLFKGE-IRVTE 408 >UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9TFF4_RICCO Length = 239 Score = 135 bits (341), Expect = 7e-31, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 16/188 (8%) Query: 17 AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76 A D G ++WP+ E D+ ++++ ++ S ++ ++ + S R + Sbjct: 18 YAKDYGVQANVWPITEIDIRRLLLESAARVDWSKVNSEAQESGRQYLSNLSKR-----QL 72 Query: 77 GRTEKYGSRLFDPSVRLAADI----RDNEG----RVFARQGEVMNPLQYVPFNQTLYFIN 128 + FDPS+ L +DI + +G +V +G +NPL + Sbjct: 73 PTIDHSAVSYFDPSIVLTSDIQAPVKQADGTYQWQVLYPKGTKVNPLDTARPVTAFLMFD 132 Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGS--IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186 G P QVA +K+ + + + GS + ++ S VY + + R ++ +P Sbjct: 133 GSQPEQVALVKKVLARSGDRIEAVEAGSGDLSQLGDSFTQTVY-HADDAMIARFQVNYLP 191 Query: 187 ARVSAVPG 194 + V G Sbjct: 192 SLVFPGTG 199 >UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus ferrooxidans ATCC 23270 RepID=B7J843_ACIF2 Length = 422 Score = 125 bits (315), Expect = 8e-28, Method: Composition-based stats. Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 16/186 (8%) Query: 23 TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82 G W V EP+M+++ Q++ + ++ KER N + + Sbjct: 234 IHGHTWKVAEPNMISIFEQKIKTFNW----KKTVEQAKERGWENMSTRLG-DALPDSLHG 288 Query: 83 GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--LYFINGDDPAQVAWMKR 140 S ++PS+ A IR G+V R+G+ +NPL PF T N QV + Sbjct: 289 KSYTYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVFNPAQAWQV--AQV 346 Query: 141 QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARVSAVPG 194 Q + ++++ +P+ + D V Q+ V L RLGI++VPA + Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALI-QPDH 405 Query: 195 DRFLKV 200 D Sbjct: 406 DVLSIT 411 >UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1 RepID=C0QUV3_PERMH Length = 203 Score = 120 bits (300), Expect = 5e-26, Method: Composition-based stats. Identities = 38/213 (17%), Positives = 88/213 (41%), Gaps = 21/213 (9%) Query: 1 MRCRG--LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58 MR ++L + G + +LGT+G ++ + ++++ + + Sbjct: 1 MRKIISIFLSLGLIGFGYSLENLGTFGKVYQ-------IEEEDIIEYIKKNAKPPKFSRE 53 Query: 59 FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118 + +R I + + + ++ R + DI EG++ A++G +N L+ + Sbjct: 54 YIQRKIHAAAQVD--VNLPVNKRDNVRYEKIIYTVPNDII-IEGKLIAKKGTKINVLKEI 110 Query: 119 PFNQTLYFI-NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL-DSRVYFDQNGVL 176 + T + + P + W K+ + ++ QG+I ++QK D R+Y VL Sbjct: 111 KLHNTYVILADYMLPYFLDWNKK-----TNAVYLITQGNILDLQKKYPDLRIYAGFPKVL 165 Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209 L + +P+ V D+ + +E + + Sbjct: 166 SS-LKVKSIPSIVYQYQ-DKLVILEKGFPNDKK 196 >UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW n=1 Tax=Arsenophonus nasoniae RepID=D2U0Q6_9ENTR Length = 312 Score = 83.8 bits (206), Expect = 3e-15, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%) Query: 19 ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78 DLGT G + E +ML +I + + L+ + K+ I + + Sbjct: 220 GDLGTQGPAKSIVERNMLDLIKEGIDNLDF--------ERMKKEAIERYWKNKKIYKFPV 271 Query: 79 TEKYGSRLFDPSVRLAADIRDNEGRVFARQG 109 + DPSV + DI G V A++G Sbjct: 272 ATENSVHYVDPSVVIPEDIISPNGAVVAKKG 302 >UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus marinus ATCC 50983 RepID=C5LHC5_9ALVE Length = 940 Score = 82.3 bits (202), Expect = 1e-14, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%) Query: 60 KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119 ER + R + + + R D +A ++D G+ Q E +NP Sbjct: 428 IERRGFGANREYLIQQLTAAQADLQRHKDAFRTIAQSLKDRRGQPLNPQAEFINPRSAKQ 487 Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKII 151 Q L F N D+P + W+ R+ E++ I Sbjct: 488 IRQ-LLFGNPDEPDHLRWVARRVRAGEEAEWI 518 >UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia tsutsugamushi str. Boryong RepID=A5CF18_ORITB Length = 50 Score = 42.2 bits (98), Expect = 0.010, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 19/41 (46%) Query: 152 LVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192 LV G+ E+ L V+FDQ G L + I + A + Sbjct: 2 LVNGNHIELNNLLGRHVFFDQFGFLSMKFKIQDMLAIIKEK 42 >UniRef50_A0NRL0 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRL0_9RHOB Length = 187 Score = 40.7 bits (94), Expect = 0.033, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 19/127 (14%) Query: 78 RTEKYGSRLFDPSV----RLAADI---RDNEGRVFARQGEVMNPLQYVPFNQTLYFINGD 130 + RL DP + + ADI +D ++ A +G N + + + + Sbjct: 64 TAYRAIQRLSDPRIIDLETIRADITLSKDQSAQIVALKGTYNNATESLRLYEGI------ 117 Query: 131 DPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190 Q+ W + T E +I L G++ DQ V+ +L D+ V Sbjct: 118 ---QLEWSEGYTVDLSEVEIDLTNGALKTSNVVSIRS---DQGRVVAGKLDYDKAKGIVR 171 Query: 191 AVPGDRF 197 G + Sbjct: 172 FSDGIKM 178 Database: uniref50.fasta Posted date: Mar 8, 2010 10:38 AM Number of letters in database: 1,040,396,356 Number of sequences in database: 3,077,464 Lambda K H 0.310 0.148 0.406 Lambda K H 0.267 0.0459 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,307,234,631 Number of Sequences: 3077464 Number of extensions: 54427921 Number of successful extensions: 166074 Number of sequences better than 1.0e-01: 59 Number of HSP's better than 0.1 without gapping: 155 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 165684 Number of HSP's gapped (non-prelim): 179 length of query: 210 length of database: 1,040,396,356 effective HSP length: 123 effective length of query: 87 effective length of database: 661,868,284 effective search space: 57582540708 effective search space used: 57582540708 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 90 (39.1 bits)