Phyre 2 alignment of P18472 with c3e7hA_

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Job Description | P18472
Confidence | 47.73% | Date | Thu Jan 5 11:37:00 GMT 2012
Rank | 9 | Aligned Residues | 23
% Identity | 13% | Template | c3e7hA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; | PDBTitle: the crystal structure of the beta subunit of the dna-2 directed rna polymerase from vibrio cholerae o1 biovar3 eltor
Resolution | 1.70 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 92 | . | . | . | . | . | . | . | 100 | . |  | . | . | . | . | . | . | . | . | 110 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | L | A | A | D | I | R | D | N | E | . | G | R | V | F | A | R | Q | G | E | V | M | N | P
Query Conservation |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | V | S | A | K | D | Y | V | N | E | A | T | G | E | L | I | I | T | A | N | Q | E | I | S | L
Template Known Secondary structure |  | S |  |  |  | T | T | B |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | .

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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