BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= batch____
         (210 letters)

Database: uniref50.fasta 
           3,077,464 sequences; 1,040,396,356 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI           428   e-119
UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A...   191   1e-47
UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=...   170   3e-41
UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=...   164   1e-39
UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ...   156   3e-37
UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=...   155   9e-37
UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati...   154   2e-36
UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula...   142   1e-32
UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ...   135   1e-30
UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga...   133   3e-30
UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH      130   2e-29
UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6...   129   7e-29
UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax...   124   2e-27
UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum...   123   5e-27
UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro...   122   6e-27
UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID...   121   1e-26
UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto...   119   9e-26
UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C...   118   1e-25
UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol...   115   6e-25
UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5...   114   2e-24
UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ...   114   3e-24
UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax...   113   4e-24
UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ...   111   1e-23
UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=...   110   3e-23
UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax...   109   5e-23
UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ...   109   7e-23
UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea...   105   7e-22
UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ...   103   4e-21
UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket...    99   8e-20
UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=...    98   1e-19
UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ...    97   2e-19
UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ...    97   3e-19
UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T...    94   3e-18
UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_...    91   2e-17
UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_...    86   6e-16
UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo...    71   2e-11
UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob...    71   3e-11
UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax...    69   8e-11
UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta...    67   4e-10
UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax...    66   9e-10
UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1     62   1e-08
UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba...    60   3e-08
UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu...    56   6e-07
UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac...    56   6e-07
UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane...    56   7e-07
UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ...    56   8e-07
UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob...    54   3e-06
UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX    53   7e-06
UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari...    53   8e-06
UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro...    50   3e-05
UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU...    48   2e-04

>UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI
          Length = 210

 Score =  428 bits (1101), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK
Sbjct: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF
Sbjct: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL
Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210
           GIDQVPARVSAVPGDRFLKVEFIPAEEGRK
Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210


>UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4
          Length = 209

 Score =  191 bits (485), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 1/176 (0%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           IAL + GQ+  AA+LGTWGDL+P+ EPDMLT I  RL A+++SGE+  + +AFK+RVI+N
Sbjct: 8   IALALGGQA-HAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFKQRVIKN 66

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126
           SLRP  V G+    +  +   DP+  +  D+ D+EGRVFAR+G+ +NPL  VPF QTL+F
Sbjct: 67  SLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPFLQTLFF 126

Query: 127 INGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
           I+ DD  Q+AWM+ Q P T   K+ILV G I +  + LD+R+YFDQ GVL Q+  +
Sbjct: 127 IDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKFAL 182


>UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9
          Length = 203

 Score =  170 bits (431), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 118/189 (62%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+ + LI L     SV A D+GT+G L+P+ EPDM+ +I  RL  ++++GEM R  +  +
Sbjct: 1   MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           + V  +++RPP V G+    +  + LFDPS     DI D  G     +G+  NPL ++PF
Sbjct: 61  KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
             TLYFINGD+PA++ W+K +   ++  KIILV+GS+PE  + LD +++FDQ GV+  R 
Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180

Query: 181 GIDQVPARV 189
           GI   PA V
Sbjct: 181 GITHTPAEV 189


>UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus
           nasoniae RepID=D2TZZ5_9ENTR
          Length = 198

 Score =  164 bits (416), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/195 (40%), Positives = 121/195 (62%), Gaps = 7/195 (3%)

Query: 9   LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRK---MDAFKERVIR 65
           L+ +     A ++GT+GD+W + E ++LTVI  ++    +S  +G +      ++ERV +
Sbjct: 2   LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQV----ESAFLGNEEKIHQEWRERVTK 57

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
           N+ RP  V G+ +  K  +R FDPS  +  DIRD+ G VFA +G+ +NP    PFN+TLY
Sbjct: 58  NAERPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLY 117

Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           FI+GDD  Q+AW+  Q P T   KIILV G+I    ++L+ R+YFDQ GVL  R GI+++
Sbjct: 118 FIDGDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKL 177

Query: 186 PARVSAVPGDRFLKV 200
           P+ V  +P    L++
Sbjct: 178 PSVVDEMPNHSLLRI 192


>UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3
           Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR
          Length = 206

 Score =  156 bits (395), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 84/200 (42%), Positives = 123/200 (61%), Gaps = 2/200 (1%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   L+ +L +     A DLGT G L+P+ EPD+LT I QRL  +++SGE+ R     + 
Sbjct: 4   RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           RV  +++RP  V G+    K  S  +DP+  +   IRD +G V AR G+ +NPL  VP++
Sbjct: 64  RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
           +TLYFI+GD+PAQ+ W+K+Q       K+ILV+G+I +   +LD  VYFDQ G L  + G
Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183

Query: 182 IDQVPARVSAVPGDRFLKVE 201
            +  P RV+    DR+L+VE
Sbjct: 184 FEHTPVRVTR--DDRWLRVE 201


>UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL
          Length = 237

 Score =  155 bits (392), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/129 (58%), Positives = 92/129 (71%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           A D G  G+++PV EPDML  + QR  +L  SG   ++MDAF +RV RNS RP  V GIG
Sbjct: 2   AKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGIG 61

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137
           ++  Y  R FDPSV L  D++D +GRVFARQGEV+NPL  VPF QTLYFI+GDD  QVAW
Sbjct: 62  KSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVAW 121

Query: 138 MKRQTPPTL 146
           M+RQ P TL
Sbjct: 122 MQRQRPQTL 130


>UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S166_SEROD
          Length = 208

 Score =  154 bits (389), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 77/181 (42%), Positives = 114/181 (62%), Gaps = 1/181 (0%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
           V AA+LG  G L+P+ E DM+  I QRLTA+EQSGE+ +     +ERV  +++RP  V G
Sbjct: 17  VYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKETEERVKEHAVRPTPVDG 76

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
           +  T++  +  +DP+  +   I D  G V A +G+ +NPL  + ++QTLYFI+GDD  Q+
Sbjct: 77  LSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTITYDQTLYFIDGDDKQQM 136

Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGD 195
           +W+ +        K+ILV G++ +   +LD  VYFDQ+G L Q+ G   VPAR+ AV GD
Sbjct: 137 SWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQKFGFKHVPARI-AVEGD 195

Query: 196 R 196
           R
Sbjct: 196 R 196


>UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VN17_9PROT
          Length = 205

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 2/204 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R     A L       A DLG  G ++PV EPD+   I  +L  LE +GE+ R  +  ++
Sbjct: 3   RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + ++ RP  VPG+ RT+       DP++ +  DI   +G+V AR GE  NPL YVP  
Sbjct: 63  RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122

Query: 122 QTLYFINGDDPAQVAWMK-RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           QTL F +GDD  QVAW K R         +ILV G + E+ +  + +++FDQ G L  R 
Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182

Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204
           GI QVPARVS   GD  L  E +P
Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205


>UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2
           Tax=Sphingomonadales RepID=A5VGR7_SPHWW
          Length = 217

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 103/188 (54%), Gaps = 1/188 (0%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
           C G   L + G +  A D GT G  +P+ EPD+L  I  RL   E SGE+ R    F +R
Sbjct: 13  CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           V     RP  V GI   ++  S  FDPSVR+  D+RD +G + A+ G+ +NPL +V  +Q
Sbjct: 73  VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L F++GD+  Q+ W   +    +++KII V+GS  E       R YFDQ G L  R GI
Sbjct: 133 DLVFVDGDNAEQLDWACGKY-SDVKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191

Query: 183 DQVPARVS 190
           +  PA VS
Sbjct: 192 EHTPAVVS 199


>UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms
           RepID=A2SNI4_METPP
          Length = 230

 Score =  133 bits (335), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 1/183 (0%)

Query: 9   LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68
            L+   S  A  LG +G++W ++EPD +  +  +LT +E+ GE+ R  + +++R + +  
Sbjct: 25  FLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYRDRYVASIE 84

Query: 69  RPPAVPGIGRTEKYGSRLFDPSVRLAADIRD-NEGRVFARQGEVMNPLQYVPFNQTLYFI 127
            P  + GI +      R FDPSV    D+ D + G++  + G  +NPL Y P  + L FI
Sbjct: 85  NPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTPLTKALIFI 144

Query: 128 NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
           +G DPAQVA+ K ++      K+ILV GS  E+ +      YFDQ G L  R GI +VPA
Sbjct: 145 DGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTRFGIKRVPA 204

Query: 188 RVS 190
            VS
Sbjct: 205 VVS 207


>UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH
          Length = 210

 Score =  130 bits (328), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/170 (42%), Positives = 98/170 (57%), Gaps = 3/170 (1%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           D G  G ++PV E D+L  I  RL  +E+SGE  +     K R I    RP  V G+ R 
Sbjct: 23  DYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIRA 82

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139
            +  S  FDP++ LAADIR+ +G +    G  +NPL  V     L F++GDDPAQ+AW  
Sbjct: 83  HESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWAL 142

Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARV 189
           RQ P    +K+ILV+G+  E+ K+   R YFDQ G L ++ GI  VPARV
Sbjct: 143 RQDP---NAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARV 189


>UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN
          Length = 212

 Score =  129 bits (324), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 3/193 (1%)

Query: 7   IALLIWGQSVA-AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           +A    G + A A DLG  G  +P+ E D+  VI  +L  +++SG+M +           
Sbjct: 14  LAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAHAAE 73

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
            + RP  V G+GRT+   S  +DPS+ +  DI D +G VFA  G+ +NPL  V   Q L 
Sbjct: 74  KARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQKLI 133

Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           FI+GD+     W   Q    +++KIILV+G+  ++ K+ D R+YFDQNG L  + GI+ V
Sbjct: 134 FIDGDNAKDFQWALDQG-SEVQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGIENV 192

Query: 186 PARVSAVPGDRFL 198
           PA V    GD+ L
Sbjct: 193 PAVVKQ-EGDKLL 204


>UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum
           aromaticum EbN1 RepID=Q5NX38_AZOSE
          Length = 211

 Score =  124 bits (311), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 3/186 (1%)

Query: 6   LIALLIWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64
           L AL+    S +A  +G T+G  WP+ EPDM+  I   +  L+ +GEM      F+E  +
Sbjct: 15  LTALMC--SSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQEETL 72

Query: 65  RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124
                PP VPGI    +  +  FDPSV  + D+ D +GRV A+ G V NP  Y+  +++L
Sbjct: 73  ATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIALSKSL 132

Query: 125 YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184
            FI+  D  QV+   R       ++++LV GS  E+Q     ++Y+DQ+G L Q  GI +
Sbjct: 133 VFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHFGIKR 192

Query: 185 VPARVS 190
           VPA +S
Sbjct: 193 VPAVLS 198


>UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1 RepID=Q5ZTS5_LEGPH
          Length = 202

 Score =  123 bits (308), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 1/189 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+   LI  +++     A D G +G  + + E D L  I Q++  ++ +GE       FK
Sbjct: 1   MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +RV  +  RP  +  + R E   +  F+PS+ +  D++D+ G+V  +QG V+NPL  V  
Sbjct: 61  KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           + TL F +GDD AQVAW+ ++     + K+IL  GS+ E+   L   +YFD NG L  + 
Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179

Query: 181 GIDQVPARV 189
            I  +PARV
Sbjct: 180 QIKYLPARV 188


>UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F366_9PROT
          Length = 228

 Score =  122 bits (307), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 101/186 (54%), Gaps = 2/186 (1%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           DLG  G  +P++E D L  I +RL+A+++SGE+ R  +       +   RP  V GI RT
Sbjct: 44  DLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIERPKPVSGITRT 103

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW-M 138
           EK      DP++ L   IRD +GR+    G  +NP  ++  ++ L FI+GDD  QVAW +
Sbjct: 104 EKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDGDDKEQVAWAL 163

Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198
                   + K ILV+GS  E+ K    RVYFDQ GVL ++L I  VPA VS   G R  
Sbjct: 164 TMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAIVSQ-DGKRLR 222

Query: 199 KVEFIP 204
             E  P
Sbjct: 223 VAEMAP 228


>UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4
          Length = 212

 Score =  121 bits (304), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 115/211 (54%), Gaps = 6/211 (2%)

Query: 2   RCRGLIALLIWGQSVAAA---DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           R R L AL +   +  AA   D G +G L+P+ EPD+L  I+ RL  +E SGE+     A
Sbjct: 4   RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
            +ER      RP     +   E+Y +  FDPS+ L  D+ D++GRVFAR G V+NPL Y 
Sbjct: 64  MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
            F + +  I+GD   QV +   +    L++ I++ +GS   + ++   R +FDQ+ V+  
Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182

Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           R G++++P+ +     D  L +E IP  E +
Sbjct: 183 RFGLERLPSVIKR--ADPILLIEEIPTGEAQ 211


>UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
           ACICU RepID=B2I3Z4_ACIBC
          Length = 212

 Score =  119 bits (297), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 112/204 (54%), Gaps = 5/204 (2%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           L+ +L    +  + DLG  G ++ ++EPD L  I  +L ALE++GE+ RK      R + 
Sbjct: 9   LLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVSRAMN 68

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
           ++  P  V  I        RLFDP++ L+ DI+ +EG V AR G  +NPL  V   +TL 
Sbjct: 69  SAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMTKTLV 128

Query: 126 FINGDDPAQVAWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183
              G DP QV  +K+ T    +++I  ILV GS  ++ ++   +VYFDQ G + +RL I 
Sbjct: 129 LFKGSDPEQVQAVKKLT-ELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRLQIT 187

Query: 184 QVPARVSAVPGDRFLKVEFIPAEE 207
            VP+ V      + L++  +PA+E
Sbjct: 188 SVPSIVRQ--NGKMLEISEVPAKE 209


>UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus
           Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW
          Length = 210

 Score =  118 bits (296), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 112/204 (54%), Gaps = 6/204 (2%)

Query: 5   GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64
           G++ +L+   S+ A +LG +G    ++E D+L + MQ+   L    +  + M   +  ++
Sbjct: 7   GILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSHLL 65

Query: 65  RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124
               +P  + GIG+T+ Y    FDPS+ +  DI ++  ++  ++G  +NPL  V  +Q L
Sbjct: 66  AQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQDL 125

Query: 125 YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184
            F++  D  Q+AW +   P     K ILV+G   ++++ L   +YFDQ GVL ++ GI  
Sbjct: 126 LFVDATDTEQLAWAQALYP---SGKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGIQS 182

Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208
           VPARVS   G R LK+E IP  E 
Sbjct: 183 VPARVSQ-EGLR-LKIELIPIGES 204


>UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales
           RepID=A0B4N9_BURCH
          Length = 213

 Score =  115 bits (289), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/196 (36%), Positives = 104/196 (53%), Gaps = 3/196 (1%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
           S  A DLG  G  +P+ E D + ++ +RL  L  +G +       ++R + +    P VP
Sbjct: 20  SAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRARQRALHDVTSLPPVP 79

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
           GI    +Y SRL DP+V  A  + ++EG V    G  +NPL  V  ++ L F +G DPAQ
Sbjct: 80  GISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTLHERLVFFDGRDPAQ 139

Query: 135 VAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
           V  ++     + +S K IL  GS  ++ KS   +VYFDQ G L QR GI +VPA +S   
Sbjct: 140 VKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQRFGITRVPAVISQRG 199

Query: 194 GDRFLKVEFIPAEEGR 209
               L+ E  PAE+ R
Sbjct: 200 NQLLLEEE--PAEQLR 213


>UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM
          Length = 211

 Score =  114 bits (285), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 3/204 (1%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           LI L+I    + A   G  G+++PV E   L +I +RLTAL  SG +      + +    
Sbjct: 7   LILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAAE 66

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
           ++ RP A+  + RT    +  + P + L+ DIRD  GRV   +G  +N L  +P  Q  +
Sbjct: 67  HANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPCW 125

Query: 126 -FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184
            F N DD AQ+ W + Q       K+IL  G+I   +K L S +YFDQ G + ++L I  
Sbjct: 126 LFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRITH 185

Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208
           VPA V+   G+R + VE    E G
Sbjct: 186 VPAIVTR-KGNRLVIVEHAIKENG 208


>UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1
           Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL
          Length = 210

 Score =  114 bits (284), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 111/198 (56%), Gaps = 12/198 (6%)

Query: 1   MRCRGLIALLIWGQSVA-AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSG---EMGRKM 56
           +R    IA+ I     A A DLG +G  + + E D+L  I+ +L   E+ G   E+ RK 
Sbjct: 4   VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63

Query: 57  -DAFKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL 115
            DA ++RV      PP VPGI  T K  + L+DPS+ +  +I D++GRVFAR+GE +NPL
Sbjct: 64  ADATRKRV----ESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPL 119

Query: 116 QYVP-FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQ 172
           + +P +N+ L FI+G D  QV +   Q+    + + I  LV GS     ++     YFDQ
Sbjct: 120 ERLPSYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQ 179

Query: 173 NGVLCQRLGIDQVPARVS 190
            G L  + GI QVPA V+
Sbjct: 180 LGTLTTKFGITQVPATVT 197


>UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms
           RepID=O85939_SPHAR
          Length = 231

 Score =  113 bits (283), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 98/191 (51%), Gaps = 3/191 (1%)

Query: 3   CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
             GL  L+ W     + AAD G  G  +P+ E D+LT I  RL  LE +G + R     +
Sbjct: 10  ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           E+ + +  RP  V G+         LFDPS+    DI D +G + A +G  +NPL  V  
Sbjct: 70  EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +Q L F++GD+ A++AW  + T     +KII V GS  +  K    R YFDQ G L  + 
Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188

Query: 181 GIDQVPARVSA 191
           GI   PA VSA
Sbjct: 189 GIRHTPAVVSA 199


>UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V0C0_9PROT
          Length = 214

 Score =  111 bits (278), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 99/184 (53%), Gaps = 1/184 (0%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           + +L+      + DLG  G  + + E D++ +I  +L  +E++GE+ +  + +K RVI  
Sbjct: 17  LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126
              P  +PGI  T    +  +DPS+    DI D  G++   +G  +NPL Y+ +N+ L F
Sbjct: 77  IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136

Query: 127 INGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           ++G D  Q+ + K+ T  +    K++L+ G   E+ +     +YFDQ G L +R  I QV
Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196

Query: 186 PARV 189
           PA V
Sbjct: 197 PAIV 200


>UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales
           bacterium SWAT-3 RepID=A5KZG1_9GAMM
          Length = 241

 Score =  110 bits (275), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 17/201 (8%)

Query: 3   CRGL-IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
            RG+ + LL    +      G  G+L+P+ E DML  I  RLT LE +GE  +    F E
Sbjct: 15  LRGVSVTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVE 74

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL------ 115
            V  +  RPP V G+  T    +   DPS++LA DI+D +G +   +G V+NP       
Sbjct: 75  SVENSVRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWP 134

Query: 116 -----QYVPFNQTLYFINGDDPAQVAWMK--RQTPPTLESKIILVQGSIPEMQKSLDSRV 168
                +   ++  + F +GDDP Q AW K  R   P    K  L  GS  E+    D+R+
Sbjct: 135 IDIPKKSFDYSHVIVFFDGDDPRQRAWAKQYRADKPI---KWTLTNGSPEEVATEFDARI 191

Query: 169 YFDQNGVLCQRLGIDQVPARV 189
           YFDQ G   ++  +  +P+ +
Sbjct: 192 YFDQQGHYSRQFQLSHIPSLI 212


>UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia
           glumae BGR1 RepID=C5ANK9_BURGB
          Length = 212

 Score =  109 bits (273), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 66/193 (34%), Positives = 98/193 (50%), Gaps = 7/193 (3%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   + A+++      + DLG  G  +P+ E D + ++  RL  L+ SG +       + 
Sbjct: 6   RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + +    PAVPG+    +Y  RL DP+V  +  + ++EG V    G  +NPL  V  +
Sbjct: 66  RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125

Query: 122 QTLYFINGDDPAQV----AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLC 177
           + L F +G DPAQV    A   R+       K IL  GS  ++ KS   +VYFDQ G L 
Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAV---KPILTGGSWFDLTKSWKRQVYFDQQGRLT 182

Query: 178 QRLGIDQVPARVS 190
           QR GI +VPA +S
Sbjct: 183 QRFGITRVPAVIS 195


>UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1
           Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO
          Length = 213

 Score =  109 bits (272), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 5/202 (2%)

Query: 8   ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67
           AL+    +   AD GT G ++ + E + L  I ++L A+E++GE+ +K     +R + ++
Sbjct: 12  ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71

Query: 68  LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127
             P  V GI    +     FDP++ L+ +I  +EG + A  G V+NPL  +  ++TL F 
Sbjct: 72  KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131

Query: 128 NGDDPAQVAWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           +G+   QV  ++R      + K+  +LV G+  E+ K    +VYFDQ G +  R GI  V
Sbjct: 132 DGNKKDQVEAVERLI-KVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAV 190

Query: 186 PARVSAVPGDRFLKVEFIPAEE 207
           PA V      + L++  +PA+E
Sbjct: 191 PAIVRQ--KGKLLEITEMPAQE 210


>UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae
           RepID=A5CD93_ORITB
          Length = 219

 Score =  105 bits (263), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 95/172 (55%), Gaps = 5/172 (2%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
           V   D GT G ++P+ E  +L VIM +L A  +SG + +    F+E++ +  +RP  V  
Sbjct: 36  VEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVKN 95

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
           + +  +  +R++D +     DI+   G +  R+G  +NPL+ + + + L  I+GDD  QV
Sbjct: 96  LSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQV 155

Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
           AW+K +       KI+LV G+  E+   L   ++FDQ G+L ++  I  VPA
Sbjct: 156 AWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPA 202


>UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella
           RepID=D1RMN6_LEGLO
          Length = 208

 Score =  103 bits (257), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 60/175 (34%), Positives = 92/175 (52%), Gaps = 2/175 (1%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
           V A +LG +G L+PV E D+  VIM +L  LEQSG + +       RV  + LR P    
Sbjct: 18  VYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARV-EDHLRRPKPLH 76

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
           +  T    +   DPS+ +   +  ++G + A++G  +NP + V F++TL+F + DD  Q+
Sbjct: 77  LPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRKQL 136

Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190
           AW+K       + K IL  G +    + L S VYFD  G L +   +  VP+ VS
Sbjct: 137 AWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVS 190


>UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia
           RepID=Q1RJF2_RICBR
          Length = 254

 Score = 99.0 bits (245), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 5/168 (2%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           D    G ++P+ E  +L VIM +L   +Q+G + +  + FK +V +   RP  V  + + 
Sbjct: 75  DYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPVLALAKA 134

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139
               +  +DPS     D++D  G +  + G  +NPL+ + + + L FI+GDD  QV W K
Sbjct: 135 SINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQQVKWAK 194

Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
            +       K++L  G+  ++ + L+  V+FDQ GVL  R  I  VPA
Sbjct: 195 SKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPA 237


>UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T1_LISDA
          Length = 256

 Score = 98.2 bits (243), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 18/207 (8%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           A +LGT    +P+ E DML  IM RL   E +GE+ +  D F ERV ++++RP  V G+ 
Sbjct: 23  AKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTPVEGLT 82

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-----------VPFNQTLYF 126
            T    +   DP++ LA DI+D  G+V   +G  +NP              +  ++ L F
Sbjct: 83  TTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLSKILVF 142

Query: 127 INGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           ++GDD  Q+ + K      +     L+ K ILV+G   ++Q  L  +VYFDQ G + +R 
Sbjct: 143 LDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGNITKRF 202

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEE 207
            I  + +  +   G R+   EF  ++E
Sbjct: 203 DIKHI-STTAKQAGTRWEVKEFDVSQE 228


>UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6
           Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8
          Length = 234

 Score = 97.4 bits (241), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 94/190 (49%), Gaps = 21/190 (11%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           AA +GT G ++P+ E DML  I  RL  LE++GE+    + F+E V     RP  V G+ 
Sbjct: 19  AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-------------VPFNQTL 124
            T+     L DP++ LA DI D  G +   +G  +NP                  F++TL
Sbjct: 78  TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137

Query: 125 YFINGDDPAQVAWMK-----RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
            F +GDD  QV W K        P T+  K IL  G    +   LD+RVYFDQ G L + 
Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTI--KWILTGGEPETLHVQLDARVYFDQQGNLSRA 195

Query: 180 LGIDQVPARV 189
           L + +VP+ V
Sbjct: 196 LTLKRVPSVV 205


>UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia
           endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK
          Length = 213

 Score = 97.4 bits (241), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
           SV   D G  G  + V E   +++I  RL+ L+    + +  +  +    +  L P  V 
Sbjct: 15  SVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMRRIAKQQILEPAPVL 70

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
           GI  T +     +DPS  L  DI+  +G++  + G  +NPL ++ F++ L FI+G    Q
Sbjct: 71  GIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVFDRELIFIDGRSQKQ 130

Query: 135 VAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           V W+K +   T               E +IILV G I E+Q+ +   +YFDQ G L  + 
Sbjct: 131 VEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGRTLYFDQGGELTNKF 190

Query: 181 GIDQVPARV 189
           GI+QVPA V
Sbjct: 191 GIEQVPAIV 199


>UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5
           Tax=Betaproteobacteria RepID=A1W649_ACISJ
          Length = 212

 Score = 94.0 bits (232), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 87/177 (49%), Gaps = 3/177 (1%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
             A DLG  G  + + EP +L +I QRL   E+SGE+ R     + R       P  V G
Sbjct: 22  AGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAPVAG 81

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
           +  T K  +  FDP+  L  +I   +G +    G   NPL  V  ++ L F +  D  QV
Sbjct: 82  VQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDSRQV 141

Query: 136 AWMKRQTPPTLESKI--ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190
               R+     + K+  IL  GS  ++ KS    VY+DQ G+L +RLGI QVPA VS
Sbjct: 142 -RQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVS 197


>UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2
          Length = 218

 Score = 90.9 bits (224), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 1/167 (0%)

Query: 25  GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKYGS 84
           G  +P+ E   +  I  RL A + SG++       ++R+ R++L    + G+ +  K   
Sbjct: 39  GTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDRINRSALNLQPLEGLAKATKGSV 98

Query: 85  RLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTPP 144
           R FDPS  L   I D +G++ A  G V+ PL+  P    ++F +G +P Q+   K+    
Sbjct: 99  RYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPFKMFFFDGREPDQIELAKKLAAE 158

Query: 145 TLESKI-ILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190
             ES + IL  G+  E+   +D  VY+DQ G + +   +++VP+ VS
Sbjct: 159 YGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQLNEVPSLVS 205


>UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM
          Length = 205

 Score = 86.3 bits (212), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 90/183 (49%), Gaps = 2/183 (1%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           +LG  G  +PV E   L  I+     L ++G      +  KE V     RPP +  +  T
Sbjct: 22  NLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEKKKEAVKSFLERPPGIK-LPTT 80

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139
           ++Y  R +D +  +  DI   EG + A+ G+ +NPL +    +   F N DD  Q AW++
Sbjct: 81  DEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFKRMTKQYCFFNMDDKMQRAWIE 140

Query: 140 RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLK 199
           +     ++SK I V GS+ +  +S   RV+FDQ G L  R  I  VPA V  + G++   
Sbjct: 141 QNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVDRFDIRHVPAIVRQI-GNKIYV 199

Query: 200 VEF 202
            E+
Sbjct: 200 EEY 202


>UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas
           RepID=B7XGR9_PSEPU
          Length = 412

 Score = 71.2 bits (173), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 89/186 (47%), Gaps = 28/186 (15%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR----NSLRPPAVPG 75
           DLGT G    + EPD++ V  QR+  L+         DA K+R I     N    P  P 
Sbjct: 218 DLGTIGSTQEIIEPDLMEVAKQRIAELD--------TDAMKKRAIARFWDNHKGHPLPP- 268

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
                +  +RL DPSV +  DI D++GRV  + G + NPL  +PF+Q L  I+   P QV
Sbjct: 269 ---VTESATRLVDPSVIVPDDILDSQGRVVQKAGRI-NPLDMMPFDQKLVVIDPTQPWQV 324

Query: 136 AWMKRQTPPTLESKIILVQGS-IP---------EMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           A  KR+     E+  + V  + IP          +Q SLD+ +Y      + +R  I + 
Sbjct: 325 ALAKREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYLLPPD-MAERFQILRA 383

Query: 186 PARVSA 191
           P+ V+A
Sbjct: 384 PSVVTA 389


>UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria
           RepID=C6YK86_VIBCH
          Length = 406

 Score = 70.9 bits (172), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 22/199 (11%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
            LG  G +  + EPD++ V MQRL +L+        + A K++ I           + + 
Sbjct: 212 SLGQRGPIHSILEPDLMQVAMQRLQSLD--------LGALKKKAIERFWSRQTFTDLPKA 263

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV---- 135
            +Y  R  DP++ +   + D  GR     G  +NPL+ +PF Q L   N  +  +V    
Sbjct: 264 TQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAVA 323

Query: 136 AWMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
            W++ Q        +I  Q        S+  ++K+LDS VY   N  L QR  +   P+ 
Sbjct: 324 HWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPSF 382

Query: 189 VSAVPGDRFLKVEFIPAEE 207
           V A  G  F ++E IPA+E
Sbjct: 383 VQA-KGLAF-EIEEIPAKE 399


>UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A0R7Q5_PELPD
          Length = 200

 Score = 69.3 bits (168), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 77/168 (45%), Gaps = 6/168 (3%)

Query: 45  ALEQSGEMGRKMDAFK--ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEG 102
           ALE+  E  +K D  K  + +  N  RP  +  + R       L D S  + +DI +N+G
Sbjct: 35  ALEELEERVQKADWKKHIQSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKG 94

Query: 103 RVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQ 161
            +   +G   NPL ++ F +TL  INGDDP QV W K  +    +   + L QG      
Sbjct: 95  ELLYPKGYTFNPLDFISFEKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTS 154

Query: 162 KSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           K L   VY+     L  R  +  VP+ V A    R ++VE I    G+
Sbjct: 155 KDLARPVYYATKP-LVARFQLRSVPSVVKA--SGRCMEVEEIFINGGK 199


>UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia
           multivorans ATCC 17616 RepID=A9AU20_BURM1
          Length = 222

 Score = 67.0 bits (162), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 22/201 (10%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           A DLGT    +P+ + D    I       +QSGE+      +++R I +   PP++ GI 
Sbjct: 22  AEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRDRTIESIKNPPSL-GIA 79

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137
            +    + L +   ++  D RD+ G+V  R+G V+ PL+ +P    L FI+G D  QV +
Sbjct: 80  TSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLTNGLLFIDGTDARQVEY 139

Query: 138 MKRQTPPTLESKIILVQGSIPEMQKSLDSRV----------YFDQNGVLCQRLG------ 181
             R++  +   KI+L  GS P   +   ++V          YFDQ  ++   L       
Sbjct: 140 AIRRS-QSERLKIVLTAGS-PYALRVKYAKVPWHGGTGVPFYFDQRRMIISTLSKLYNIQ 197

Query: 182 IDQVPARVSAVPGDRFLKVEF 202
           I+ VPA +    GDR L V+F
Sbjct: 198 INSVPAAIFQ-QGDR-LAVQF 216


>UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales
           RepID=A1AKL5_PELPD
          Length = 218

 Score = 65.9 bits (159), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 9/184 (4%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           I LL+   S  A +LG +G  + + E D L  I +R   ++             +R + N
Sbjct: 10  IVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWH-------KVLDKRKVEN 62

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126
              PP    + R ++  S   D +     D+ D +G +   +G   NPL YV + +TL  
Sbjct: 63  FQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKTLVV 122

Query: 127 INGDDPAQVAWM-KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           I+G DP QV W    +    L+  ++L +G +  + K + SR  F  +  + +RL +  V
Sbjct: 123 IDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRI-SRPLFYADRKIIERLKLKAV 181

Query: 186 PARV 189
           P+ V
Sbjct: 182 PSVV 185


>UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1
          Length = 503

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 22/193 (11%)

Query: 25  GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKM-DAFKERVIRNSLRPPAVPGIGRTEKYG 83
           G ++PV+E  ++  + +R    +  G   R + D +K + + +   PPA       +++ 
Sbjct: 309 GTIYPVEEKSIIKELEERAQKYDWEGAKKRAVADTWKNQWMVD--LPPA-------QEHK 359

Query: 84  SRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQTP 143
             L DP+VR+  D++D +GRV A  GE++NPL   P N T+   +  +P Q+ W ++Q  
Sbjct: 360 EFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQYR 419

Query: 144 PTLESKIIL-----VQ-----GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
             L S  ++     +Q       + ++++  + +V F  N  +  R  I   PA ++   
Sbjct: 420 QRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-TD 477

Query: 194 GDRFLKVEFIPAE 206
            D+F    F  AE
Sbjct: 478 QDKFRITLFSEAE 490


>UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter
           RepID=Q4HP76_CAMUP
          Length = 248

 Score = 60.5 bits (145), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 20/174 (11%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           +++ LI+  +     LG   ++ P  E DM+ +I + +  ++   E+  + +  +E+   
Sbjct: 9   ILSTLIYAGNTKELSLG---EVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQAKE 63

Query: 66  NSLR------PPAVPGIGRTEKYGSRLFDP--SVRLAADIRDNEGRVFARQGEVMNPLQY 117
           N ++       P  P +        R+F P  +  L  DI+D  G+V  ++G   NP  Y
Sbjct: 64  NVIQYKPKGLTPLTPALE------DRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANY 117

Query: 118 VPFNQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYF 170
           V  +  L  I+G +  +V W K+      L  K++L  GS  E+ K L   V++
Sbjct: 118 VKISYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEVFY 171


>UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LTZ6_SYNAS
          Length = 277

 Score = 56.2 bits (134), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 8/176 (4%)

Query: 14  QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73
           Q+   ADLG  G  +PV E D L+ I +R  A++     G+  D  + R    + RP  +
Sbjct: 83  QAAVCADLGNIGATYPVVERDALSEIEERAKAVD----WGKAFDPKRTRERIQNYRPEGM 138

Query: 74  PGIGRTEKYGSRLF--DPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDD 131
             +   +K   R+F  D S  L  DI D  G +   +G   NPL +V     L  I+G +
Sbjct: 139 EALPAAKK--DRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGN 196

Query: 132 PAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
             Q+ W K  +       ++L+ G           R  F  +  + +R  +  VPA
Sbjct: 197 ERQIEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPAFYADARIVKRFQLKAVPA 252


>UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus
           ferrooxidans ATCC 23270 RepID=B7J843_ACIF2
          Length = 422

 Score = 56.2 bits (134), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%)

Query: 25  GDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN-SLR-PPAVPGIGRTEKY 82
           G  W V EP+M+++  Q++          + ++  KER   N S R   A+P     + Y
Sbjct: 236 GHTWKVAEPNMISIFEQKIKTFN----WKKTVEQAKERGWENMSTRLGDALPDSLHGKSY 291

Query: 83  GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142
               ++PS+   A IR   G+V  R+G+ +NPL   PF  T  +I   +PAQ AW   Q 
Sbjct: 292 ---TYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVF-NPAQ-AWQVAQV 346

Query: 143 PP--TLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARV 189
               +    ++++   +P+  +  D  V   Q+ V      L  RLGI++VPA +
Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALI 401


>UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3
           RepID=A0L2Z3_SHESA
          Length = 431

 Score = 56.2 bits (134), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 23/190 (12%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTAL---EQSGEMGRKMDAFKERVIRNSLRPPAVP 74
           +  LG   D + + E DML +I Q+L  +   E+  E   +    KE  +  SL+   V 
Sbjct: 225 SGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTESLKDEDV- 283

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
                 +Y     DP VR   D    +G+ FA+ G+V++P   +     L+ I+     Q
Sbjct: 284 ------RYK---IDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQ 334

Query: 135 VAWMKRQTPPTLESKIILVQGSIP---------EMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           +AWM      T   ++ ++  ++P          +Q  L  R+Y  Q   +  R  ++ +
Sbjct: 335 LAWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHL 393

Query: 186 PARVSAVPGD 195
           PA V    G+
Sbjct: 394 PALVDLFKGE 403


>UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus
           ATCC BAA-450 RepID=C9NPU3_9VIBR
          Length = 213

 Score = 56.2 bits (134), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 27/200 (13%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
           S+ AA+    G  + + E D+   I QRL  LE  G + +     ++R IR+    P   
Sbjct: 15  SLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQRDR-IRDQFEQPMPV 73

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQ-----------YVPFNQT 123
            +  T+   + L DPSVRL A             G  +NP                + + 
Sbjct: 74  SLSATQSPTTFLVDPSVRLPATYDGQP------PGRWVNPFDASTWPSPPLGMTYHYPRA 127

Query: 124 LYFINGDDPAQVAWMKRQT---PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           L F +G D  Q  W  + T   P T     IL  G    + ++L++ VYFDQ G L ++L
Sbjct: 128 LVFFDGRDRKQRRWATQFTADRPITW----ILTGGRPQTLARTLNAPVYFDQGGYLSRKL 183

Query: 181 GIDQVPARVSAVPGDRFLKV 200
            +  VP+ V  V   R+ +V
Sbjct: 184 RLRSVPSVV--VQAHRYWEV 201


>UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F048_9HELI
          Length = 219

 Score = 53.9 bits (128), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 9/151 (5%)

Query: 25  GDLWPVKEPDMLTVIMQRLTA----LEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTE 80
           G  +  KE D+L +I + LT     LEQ   +G++ D  KE +   + RP  +  +    
Sbjct: 26  GKTYEFKERDILELIQEHLTKNRPELEQKL-LGQR-DKLKENI--KNWRPKDMVKLTPAP 81

Query: 81  KYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKR 140
           K  +   D +  L  DI+D+EG +   QG   NP +Y   +  +  IN +D  ++ W+++
Sbjct: 82  KNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKYARLSYGIVVINANDKEELEWLEK 141

Query: 141 -QTPPTLESKIILVQGSIPEMQKSLDSRVYF 170
                T+  +I L +GS  EM +      Y+
Sbjct: 142 GGYLNTIAYRIFLSEGSYYEMIQKHKQDFYY 172


>UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX
          Length = 421

 Score = 52.8 bits (125), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 34/211 (16%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           DLG  G +  + EPD++ V  +RL  ++   +  + ++ F  +   N L         R 
Sbjct: 221 DLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFNEL--------PRA 272

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFINGD 130
            K  +R  DPSV + +DI   +G VFA  G+V+NPL            PF Q +   +  
Sbjct: 273 PKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDPL 332

Query: 131 DPAQVAWMKRQTPP-TLESKIILVQGSIPEMQK------------SLDSRVYFDQNGVLC 177
           D  Q+  + ++ P   LE  +  +     E  K            + D+ VY      L 
Sbjct: 333 DKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDLI 391

Query: 178 QRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208
            R  ++  P+ ++A  G +F+  E   AEEG
Sbjct: 392 TRFELEHTPSVITAR-GKKFVVREL--AEEG 419


>UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris
           RepID=Q8L272_PROVU
          Length = 416

 Score = 52.8 bits (125), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 35/208 (16%)

Query: 20  DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRT 79
           DLG  G    + E  +L +I Q++  L+        +D + ++       PPA+      
Sbjct: 227 DLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEFTDF-PPAL------ 279

Query: 80  EKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMK 139
            K+  +  +PSV +  DI   +G+V A+QG + NPL  +PF   L F +    A++ W +
Sbjct: 280 -KHNQKFINPSVVIPQDILAPDGQVVAKQGRI-NPLDVIPFRLKLIFFD----ARIDWQR 333

Query: 140 R-------QTPPTLESKIILVQGSI-----PEMQKSLD-----SRVYFDQNGVLCQRLGI 182
           +          P +E   IL+  ++        Q + +     SR+Y  Q G +  R GI
Sbjct: 334 KIARREYQNAEPGIEP--ILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGI 390

Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEGRK 210
             VP+ V+A   D+   +   P +E  K
Sbjct: 391 TSVPSIVTAT--DKQYVINEYPEDEANK 416


>UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SHD8_9BACT
          Length = 216

 Score = 50.4 bits (119), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 14/198 (7%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS-LRPPAVPGI 76
           A DLGT+G  + + E D++T I +R +  +      RK +A K+R+ + + +   ++P  
Sbjct: 16  AKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRLRKEAGMASMSLPPA 71

Query: 77  GRTEKYGSRLFDPSVRLAADI--RDNEGR---VFARQGEVMNPLQYVPFNQTLYFINGDD 131
            +   Y     D +  L  DI   D  G+   V   +G   NPL Y    +T   +NG  
Sbjct: 72  DKDRSY---YVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYADITETYVILNGKR 128

Query: 132 PAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191
            A++ W  +       +  ++ +G   E+ + L  R  F  +    +R  I+   + +  
Sbjct: 129 EAELQWFSKYYKDDYRAYPLITEGDAFEVAEKL-GRGVFKLDSQFRERFSIENTVSVIYE 187

Query: 192 VPGDRFLKVEFIPAEEGR 209
               + ++V+ I  ++ +
Sbjct: 188 DFSRKMMRVDVIKVKDEK 205


>UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN
          Length = 527

 Score = 47.8 bits (112), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 26/201 (12%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGR---KMDAFKER 62
            +A+L+   S   A     G L+ + EPD L  I +R+  ++   E+ +   K  AFK  
Sbjct: 11  FVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELNKDREKWGAFK-- 66

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
                     VP +  T++  +R   P      +++D +GR+   +G   NPL +V   Q
Sbjct: 67  ---------GVP-LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQ 116

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVY-FDQNGVLCQRLG 181
            L  +   +  Q  W+K  +  T    II   G + E+ + +    +  D+N  L QRL 
Sbjct: 117 RLIIV---EKGQEDWLK--SIATESDMIIYASGDVIEVSQRIGRNAFILDKN--LQQRLD 169

Query: 182 IDQVPARVSAVPGDRFLKVEF 202
           I  VP+ +    G+  +  EF
Sbjct: 170 IKVVPSIIQQ-EGEHLIIQEF 189


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI           298   7e-80
UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ...   246   3e-64
UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=...   245   6e-64
UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula...   245   7e-64
UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ...   239   4e-62
UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati...   239   5e-62
UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro...   235   5e-61
UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga...   234   1e-60
UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ...   234   1e-60
UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum...   234   2e-60
UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax...   234   2e-60
UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax...   233   3e-60
UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ...   232   8e-60
UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=...   231   1e-59
UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6...   229   4e-59
UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A...   229   4e-59
UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol...   227   2e-58
UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto...   227   2e-58
UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID...   225   6e-58
UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5...   225   7e-58
UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax...   225   9e-58
UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH      218   8e-56
UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=...   216   4e-55
UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ...   211   1e-53
UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ...   211   1e-53
UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T...   210   3e-53
UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket...   210   3e-53
UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ...   210   4e-53
UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C...   209   6e-53
UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea...   206   3e-52
UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=...   204   2e-51
UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_...   199   4e-50
UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_...   198   1e-49
UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ...   195   9e-49
UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ...   186   5e-46
UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax...   183   3e-45
UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu...   180   2e-44
UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax...   180   3e-44
UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=...   174   2e-42
UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba...   166   4e-40
UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob...   161   1e-38
UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro...   161   2e-38
UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta...   160   4e-38
UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU...   152   7e-36
UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo...   151   9e-36
UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari...   149   7e-35
UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob...   148   1e-34
UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX   144   2e-33
UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1    143   3e-33
UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane...   135   7e-31
UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac...   122   1e-26

Sequences not found previously or not previously below threshold:

UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp....   123   5e-27
UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomo...   109   6e-23
UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus...   107   2e-22
UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW...    74   4e-12
UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Perseph...    63   5e-09
UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus mar...    47   4e-04
UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia ts...    43   0.006
UniRef50_B8LDJ9 Predicted protein n=1 Tax=Thalassiosira pseudona...    40   0.050

>UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI
          Length = 210

 Score =  298 bits (764), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK
Sbjct: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF
Sbjct: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL
Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210
           GIDQVPARVSAVPGDRFLKVEFIPAEEGRK
Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210


>UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3
           Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR
          Length = 206

 Score =  246 bits (629), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 84/202 (41%), Positives = 124/202 (61%), Gaps = 2/202 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   L+ +L +     A DLGT G L+P+ EPD+LT I QRL  +++SGE+ R     + 
Sbjct: 4   RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           RV  +++RP  V G+    K  S  +DP+  +   IRD +G V AR G+ +NPL  VP++
Sbjct: 64  RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
           +TLYFI+GD+PAQ+ W+K+Q       K+ILV+G+I +   +LD  VYFDQ G L  + G
Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183

Query: 182 IDQVPARVSAVPGDRFLKVEFI 203
            +  P RV+    DR+L+VE +
Sbjct: 184 FEHTPVRVTRD--DRWLRVEEV 203


>UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9
          Length = 203

 Score =  245 bits (627), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 1/201 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+ + LI L     SV A D+GT+G L+P+ EPDM+ +I  RL  ++++GEM R  +  +
Sbjct: 1   MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           + V  +++RPP V G+    +  + LFDPS     DI D  G     +G+  NPL ++PF
Sbjct: 61  KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
             TLYFINGD+PA++ W+K +   ++  KIILV+GS+PE  + LD +++FDQ GV+  R 
Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180

Query: 181 GIDQVPARVSAVPGDRFLKVE 201
           GI   PA V    GD     E
Sbjct: 181 GITHTPAEVFQ-EGDMLRVKE 200


>UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VN17_9PROT
          Length = 205

 Score =  245 bits (626), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 82/204 (40%), Positives = 111/204 (54%), Gaps = 2/204 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R     A L       A DLG  G ++PV EPD+   I  +L  LE +GE+ R  +  ++
Sbjct: 3   RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + ++ RP  VPG+ RT+       DP++ +  DI   +G+V AR GE  NPL YVP  
Sbjct: 63  RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122

Query: 122 QTLYFINGDDPAQVAWMK-RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           QTL F +GDD  QVAW K R         +ILV G + E+ +  + +++FDQ G L  R 
Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182

Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204
           GI QVPARVS   GD  L  E +P
Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205


>UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2
           Tax=Sphingomonadales RepID=A5VGR7_SPHWW
          Length = 217

 Score =  239 bits (611), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 105/206 (50%), Gaps = 2/206 (0%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
           C G   L + G +  A D GT G  +P+ EPD+L  I  RL   E SGE+ R    F +R
Sbjct: 13  CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           V     RP  V GI   ++  S  FDPSVR+  D+RD +G + A+ G+ +NPL +V  +Q
Sbjct: 73  VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L F++GD+  Q+ W   +    +++KII V+GS  E       R YFDQ G L  R GI
Sbjct: 133 DLVFVDGDNAEQLDWACGKY-SDVKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191

Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208
           +  PA VS   G      E       
Sbjct: 192 EHTPAVVSQ-AGRVMRVTEHALKGRA 216


>UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S166_SEROD
          Length = 208

 Score =  239 bits (610), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 1/194 (0%)

Query: 8   ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67
            ++     V AA+LG  G L+P+ E DM+  I QRLTA+EQSGE+ +     +ERV  ++
Sbjct: 9   LIIGLTGPVYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKETEERVKEHA 68

Query: 68  LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127
           +RP  V G+  T++  +  +DP+  +   I D  G V A +G+ +NPL  + ++QTLYFI
Sbjct: 69  VRPTPVDGLSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTITYDQTLYFI 128

Query: 128 NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
           +GDD  Q++W+ +        K+ILV G++ +   +LD  VYFDQ+G L Q+ G   VPA
Sbjct: 129 DGDDKQQMSWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQKFGFKHVPA 188

Query: 188 RVSAVPGDRFLKVE 201
           R+ AV GDR    E
Sbjct: 189 RI-AVEGDRMRIDE 201


>UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F366_9PROT
          Length = 228

 Score =  235 bits (601), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 74/187 (39%), Positives = 100/187 (53%), Gaps = 2/187 (1%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G  +P++E D L  I +RL+A+++SGE+ R  +       +   RP  V GI R
Sbjct: 43  GDLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIERPKPVSGITR 102

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
           TEK      DP++ L   IRD +GR+    G  +NP  ++  ++ L FI+GDD  QVAW 
Sbjct: 103 TEKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDGDDKEQVAWA 162

Query: 139 KRQTPP-TLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRF 197
                    + K ILV+GS  E+ K    RVYFDQ GVL ++L I  VPA VS   G R 
Sbjct: 163 LTMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAIVSQ-DGKRL 221

Query: 198 LKVEFIP 204
              E  P
Sbjct: 222 RVAEMAP 228


>UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms
           RepID=A2SNI4_METPP
          Length = 230

 Score =  234 bits (597), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 70/198 (35%), Positives = 104/198 (52%), Gaps = 2/198 (1%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
              L+   S  A  LG +G++W ++EPD +  +  +LT +E+ GE+ R  + +++R + +
Sbjct: 23  AVFLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYRDRYVAS 82

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNE-GRVFARQGEVMNPLQYVPFNQTLY 125
              P  + GI +      R FDPSV    D+ D   G++  + G  +NPL Y P  + L 
Sbjct: 83  IENPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTPLTKALI 142

Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           FI+G DPAQVA+ K ++      K+ILV GS  E+ +      YFDQ G L  R GI +V
Sbjct: 143 FIDGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTRFGIKRV 202

Query: 186 PARVSAVPGDRFLKVEFI 203
           PA VS   G      EF 
Sbjct: 203 PAVVSQ-KGRALQIEEFA 219


>UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1
           Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO
          Length = 213

 Score =  234 bits (597), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 3/203 (1%)

Query: 8   ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67
           AL+    +   AD GT G ++ + E + L  I ++L A+E++GE+ +K     +R + ++
Sbjct: 12  ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71

Query: 68  LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127
             P  V GI    +     FDP++ L+ +I  +EG + A  G V+NPL  +  ++TL F 
Sbjct: 72  KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131

Query: 128 NGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186
           +G+   QV  ++R           +LV G+  E+ K    +VYFDQ G +  R GI  VP
Sbjct: 132 DGNKKDQVEAVERLIKVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAVP 191

Query: 187 ARVSAVPGDRFLKVEFIPAEEGR 209
           A V      + L++  +PA+E +
Sbjct: 192 AIVRQK--GKLLEITEMPAQELK 212


>UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1 RepID=Q5ZTS5_LEGPH
          Length = 202

 Score =  234 bits (597), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 2/202 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+   LI  +++     A D G +G  + + E D L  I Q++  ++ +GE       FK
Sbjct: 1   MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +RV  +  RP  +  + R E   +  F+PS+ +  D++D+ G+V  +QG V+NPL  V  
Sbjct: 61  KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           + TL F +GDD AQVAW+ ++     + K+IL  GS+ E+   L   +YFD NG L  + 
Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179

Query: 181 GIDQVPARVSAVPGDRFLKVEF 202
            I  +PARV    G R    E 
Sbjct: 180 QIKYLPARVFQ-AGKRLQINEV 200


>UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia
           glumae BGR1 RepID=C5ANK9_BURGB
          Length = 212

 Score =  234 bits (596), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 103/209 (49%), Gaps = 3/209 (1%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   + A+++      + DLG  G  +P+ E D + ++  RL  L+ SG +       + 
Sbjct: 6   RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + +    PAVPG+    +Y  RL DP+V  +  + ++EG V    G  +NPL  V  +
Sbjct: 66  RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTL-ESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           + L F +G DPAQV   +          K IL  GS  ++ KS   +VYFDQ G L QR 
Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAVKPILTGGSWFDLTKSWKRQVYFDQQGRLTQRF 185

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           GI +VPA +S       L+ E  PA + R
Sbjct: 186 GITRVPAVISQRGNQLLLEEE--PAAQLR 212


>UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms
           RepID=O85939_SPHAR
          Length = 231

 Score =  233 bits (595), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 3/195 (1%)

Query: 3   CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
             GL  L+ W     + AAD G  G  +P+ E D+LT I  RL  LE +G + R     +
Sbjct: 10  ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           E+ + +  RP  V G+         LFDPS+    DI D +G + A +G  +NPL  V  
Sbjct: 70  EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +Q L F++GD+ A++AW  + T     +KII V GS  +  K    R YFDQ G L  + 
Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188

Query: 181 GIDQVPARVSAVPGD 195
           GI   PA VSA   +
Sbjct: 189 GIRHTPAVVSAAGAN 203


>UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V0C0_9PROT
          Length = 214

 Score =  232 bits (591), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 2/197 (1%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           + +L+      + DLG  G  + + E D++ +I  +L  +E++GE+ +  + +K RVI  
Sbjct: 17  LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126
              P  +PGI  T    +  +DPS+    DI D  G++   +G  +NPL Y+ +N+ L F
Sbjct: 77  IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136

Query: 127 INGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           ++G D  Q+ + K+ T  +    K++L+ G   E+ +     +YFDQ G L +R  I QV
Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196

Query: 186 PARVSAVPGDRFLKVEF 202
           PA V    G R    E 
Sbjct: 197 PAIVRQ-EGKRLRIDEL 212


>UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus
           nasoniae RepID=D2TZZ5_9ENTR
          Length = 198

 Score =  231 bits (590), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)

Query: 9   LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68
           L+ +     A ++GT+GD+W + E ++LTVI  ++ +    G   +    ++ERV +N+ 
Sbjct: 2   LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQVESA-FLGNEEKIHQEWRERVTKNAE 60

Query: 69  RPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFIN 128
           RP  V G+ +  K  +R FDPS  +  DIRD+ G VFA +G+ +NP    PFN+TLYFI+
Sbjct: 61  RPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLYFID 120

Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           GDD  Q+AW+  Q P T   KIILV G+I    ++L+ R+YFDQ GVL  R GI+++P+ 
Sbjct: 121 GDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKLPSV 180

Query: 189 VSAVPGDRFLKVEFIPAE 206
           V  +P    L++  +  +
Sbjct: 181 VDEMPNHSLLRITEVAVQ 198


>UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN
          Length = 212

 Score =  229 bits (585), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 2/200 (1%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             GL           A DLG  G  +P+ E D+  VI  +L  +++SG+M +        
Sbjct: 11  AAGLAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAH 70

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
               + RP  V G+GRT+   S  +DPS+ +  DI D +G VFA  G+ +NPL  V   Q
Sbjct: 71  AAEKARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQ 130

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L FI+GD+     W   Q    +++KIILV+G+  ++ K+ D R+YFDQNG L  + GI
Sbjct: 131 KLIFIDGDNAKDFQWALDQGSE-VQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGI 189

Query: 183 DQVPARVSAVPGDRFLKVEF 202
           + VPA V    GD+ L  E 
Sbjct: 190 ENVPAVVKQ-EGDKLLVREV 208


>UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4
          Length = 209

 Score =  229 bits (585), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 97/207 (46%), Positives = 135/207 (65%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           MR   +   L  G    AA+LGTWGDL+P+ EPDMLT I  RL A+++SGE+  + +AFK
Sbjct: 1   MRAACVYIALALGGQAHAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +RVI+NSLRP  V G+    +  +   DP+  +  D+ D+EGRVFAR+G+ +NPL  VPF
Sbjct: 61  QRVIKNSLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
            QTL+FI+ DD  Q+AWM+ Q P T   K+ILV G I +  + LD+R+YFDQ GVL Q+ 
Sbjct: 121 LQTLFFIDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKF 180

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEE 207
            +  VPA V A P  + L+++    E+
Sbjct: 181 ALTAVPAAVHAAPNGKRLQIDTYALEQ 207


>UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales
           RepID=A0B4N9_BURCH
          Length = 213

 Score =  227 bits (580), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 73/210 (34%), Positives = 107/210 (50%), Gaps = 3/210 (1%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           +     + L     S  A DLG  G  +P+ E D + ++ +RL  L  +G +       +
Sbjct: 6   VTWIAALTLAASPISAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRAR 65

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +R + +    P VPGI    +Y SRL DP+V  A  + ++EG V    G  +NPL  V  
Sbjct: 66  QRALHDVTSLPPVPGISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTL 125

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
           ++ L F +G DPAQV  ++     + +S K IL  GS  ++ KS   +VYFDQ G L QR
Sbjct: 126 HERLVFFDGRDPAQVKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQR 185

Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
            GI +VPA +S       L+ E  PAE+ R
Sbjct: 186 FGITRVPAVISQRGNQLLLEEE--PAEQLR 213


>UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
           ACICU RepID=B2I3Z4_ACIBC
          Length = 212

 Score =  227 bits (579), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 3/210 (1%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           +   L+ +L    +  + DLG  G ++ ++EPD L  I  +L ALE++GE+ RK      
Sbjct: 5   KYLFLLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVS 64

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + ++  P  V  I        RLFDP++ L+ DI+ +EG V AR G  +NPL  V   
Sbjct: 65  RAMNSAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMT 124

Query: 122 QTLYFINGDDPAQVAWMKRQTP-PTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +TL    G DP QV  +K+ T         ILV GS  ++ ++   +VYFDQ G + +RL
Sbjct: 125 KTLVLFKGSDPEQVQAVKKLTELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRL 184

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210
            I  VP+ V      + L++  +PA+E  K
Sbjct: 185 QITSVPSIVRQ--NGKMLEISEVPAKELVK 212


>UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4
          Length = 212

 Score =  225 bits (575), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 2   RCRGLIALLIWGQSVAA---ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           R R L AL +   +  A    D G +G L+P+ EPD+L  I+ RL  +E SGE+     A
Sbjct: 4   RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
            +ER      RP     +   E+Y +  FDPS+ L  D+ D++GRVFAR G V+NPL Y 
Sbjct: 64  MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
            F + +  I+GD   QV +   +    L++ I++ +GS   + ++   R +FDQ+ V+  
Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182

Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           R G++++P+ +     D  L +E IP  E +
Sbjct: 183 RFGLERLPSVIKR--ADPILLIEEIPTGEAQ 211


>UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM
          Length = 211

 Score =  225 bits (574), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 71/204 (34%), Positives = 105/204 (51%), Gaps = 3/204 (1%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           LI L+I    + A   G  G+++PV E   L +I +RLTAL  SG +      + +    
Sbjct: 7   LILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAAE 66

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
           ++ RP A+  + RT    +  + P + L+ DIRD  GRV   +G  +N L  +P  Q  +
Sbjct: 67  HANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPCW 125

Query: 126 -FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQ 184
            F N DD AQ+ W + Q       K+IL  G+I   +K L S +YFDQ G + ++L I  
Sbjct: 126 LFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRITH 185

Query: 185 VPARVSAVPGDRFLKVEFIPAEEG 208
           VPA V+   G+R + VE    E G
Sbjct: 186 VPAIVTR-KGNRLVIVEHAIKENG 208


>UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum
           aromaticum EbN1 RepID=Q5NX38_AZOSE
          Length = 211

 Score =  225 bits (573), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 4/202 (1%)

Query: 4   RGLIALL--IWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           + L+A L  +   S +A  +G T+G  WP+ EPDM+  I   +  L+ +GEM      F+
Sbjct: 9   KILLACLTALMCSSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQ 68

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           E  +     PP VPGI    +  +  FDPSV  + D+ D +GRV A+ G V NP  Y+  
Sbjct: 69  EETLATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIAL 128

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +++L FI+  D  QV+   R       ++++LV GS  E+Q     ++Y+DQ+G L Q  
Sbjct: 129 SKSLVFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHF 188

Query: 181 GIDQVPARVSAVPGDRFLKVEF 202
           GI +VPA +S   G +    E 
Sbjct: 189 GIKRVPAVLSQ-DGMKIRVDEV 209


>UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH
          Length = 210

 Score =  218 bits (557), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 77/185 (41%), Positives = 103/185 (55%), Gaps = 5/185 (2%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            D G  G ++PV E D+L  I  RL  +E+SGE  +     K R I    RP  V G+ R
Sbjct: 22  RDYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIR 81

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             +  S  FDP++ LAADIR+ +G +    G  +NPL  V     L F++GDDPAQ+AW 
Sbjct: 82  AHESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWA 141

Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198
            RQ P    +K+ILV+G+  E+ K+   R YFDQ G L ++ GI  VPARV      R L
Sbjct: 142 LRQDP---NAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARVRQ--NGRVL 196

Query: 199 KVEFI 203
           +V  I
Sbjct: 197 EVSEI 201


>UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales
           bacterium SWAT-3 RepID=A5KZG1_9GAMM
          Length = 241

 Score =  216 bits (550), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 13/206 (6%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           + LL    +      G  G+L+P+ E DML  I  RLT LE +GE  +    F E V  +
Sbjct: 20  VTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVESVENS 79

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY--------- 117
             RPP V G+  T    +   DPS++LA DI+D +G +   +G V+NP            
Sbjct: 80  VRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWPIDIPK 139

Query: 118 --VPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175
               ++  + F +GDDP Q AW K+        K  L  GS  E+    D+R+YFDQ G 
Sbjct: 140 KSFDYSHVIVFFDGDDPRQRAWAKQYRADKP-IKWTLTNGSPEEVATEFDARIYFDQQGH 198

Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVE 201
             ++  +  +P+ +    G R+   E
Sbjct: 199 YSRQFQLSHIPSLIEQ-DGARWKITE 223


>UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella
           RepID=D1RMN6_LEGLO
          Length = 208

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 99/195 (50%), Gaps = 4/195 (2%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
           V A +LG +G L+PV E D+  VIM +L  LEQSG + +       RV  +  RP  +  
Sbjct: 18  VYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARVEDHLRRPKPL-H 76

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
           +  T    +   DPS+ +   +  ++G + A++G  +NP + V F++TL+F + DD  Q+
Sbjct: 77  LPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRKQL 136

Query: 136 AWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGD 195
           AW+K       + K IL  G +    + L S VYFD  G L +   +  VP+ VS     
Sbjct: 137 AWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVSQE--G 193

Query: 196 RFLKVEFIPAEEGRK 210
              +++ I   E RK
Sbjct: 194 LVWRIQEIGQHELRK 208


>UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1
           Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL
          Length = 210

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%)

Query: 1   MRCRGLIALLIWGQ-SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59
           +R    IA+ I       A DLG +G  + + E D+L  I+ +L   E+ G +      F
Sbjct: 4   VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63

Query: 60  KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119
            +   +    PP VPGI  T K  + L+DPS+ +  +I D++GRVFAR+GE +NPL+ +P
Sbjct: 64  ADATRKRVESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPLERLP 123

Query: 120 -FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQNGVL 176
            +N+ L FI+G D  QV +   Q+    + + I  LV GS     ++     YFDQ G L
Sbjct: 124 SYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQLGTL 183

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFI 203
             + GI QVPA V+   G      E  
Sbjct: 184 TTKFGITQVPATVTK-EGTALRVREVA 209


>UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5
           Tax=Betaproteobacteria RepID=A1W649_ACISJ
          Length = 212

 Score =  210 bits (535), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 65/191 (34%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 13  GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72
                A DLG  G  + + EP +L +I QRL   E+SGE+ R     + R       P  
Sbjct: 19  STPAGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAP 78

Query: 73  VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDP 132
           V G+  T K  +  FDP+  L  +I   +G +    G   NPL  V  ++ L F +  D 
Sbjct: 79  VAGVQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDS 138

Query: 133 AQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191
            QV   +        + K IL  GS  ++ KS    VY+DQ G+L +RLGI QVPA VS 
Sbjct: 139 RQVRQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVSQ 198

Query: 192 VPGDRFLKVEF 202
             G R    E 
Sbjct: 199 -EGKRLRIDEM 208


>UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia
           RepID=Q1RJF2_RICBR
          Length = 254

 Score =  210 bits (534), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 7/190 (3%)

Query: 14  QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73
             +   D    G ++P+ E  +L VIM +L   +Q+G + +  + FK +V +   RP  V
Sbjct: 69  SKIEIRDYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPV 128

Query: 74  PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133
             + +     +  +DPS     D++D  G +  + G  +NPL+ + + + L FI+GDD  
Sbjct: 129 LALAKASINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQ 188

Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
           QV W K +       K++L  G+  ++ + L+  V+FDQ GVL  R  I  VPA   A  
Sbjct: 189 QVKWAKSKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPAI--ARQ 241

Query: 194 GDRFLKVEFI 203
             + LK+  I
Sbjct: 242 EGKLLKISEI 251


>UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6
           Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8
          Length = 234

 Score =  210 bits (534), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 68/205 (33%), Positives = 96/205 (46%), Gaps = 18/205 (8%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           AA +GT G ++P+ E DML  I  RL  LE++GE+    + F+E V     RP  V G+ 
Sbjct: 19  AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY-------------VPFNQTL 124
            T+     L DP++ LA DI D  G +   +G  +NP                  F++TL
Sbjct: 78  TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137

Query: 125 YFINGDDPAQVAWMKRQTPPTLES---KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
            F +GDD  QV W K       +    K IL  G    +   LD+RVYFDQ G L + L 
Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTIKWILTGGEPETLHVQLDARVYFDQQGNLSRALT 197

Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206
           + +VP+ V    G  +   E   + 
Sbjct: 198 LKRVPSVVKQ-EGVMWQVREMDVSN 221


>UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus
           Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW
          Length = 210

 Score =  209 bits (532), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 6/206 (2%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             G++ +L+   S+ A +LG +G    ++E D+L + MQ+   L    +  + M   +  
Sbjct: 5   LTGILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSH 63

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           ++    +P  + GIG+T+ Y    FDPS+ +  DI ++  ++  ++G  +NPL  V  +Q
Sbjct: 64  LLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQ 123

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L F++  D  Q+AW +   P     K ILV+G   ++++ L   +YFDQ GVL ++ GI
Sbjct: 124 DLLFVDATDTEQLAWAQALYPS---GKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI 180

Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208
             VPARVS   G R LK+E IP  E 
Sbjct: 181 QSVPARVSQ-EGLR-LKIELIPIGES 204


>UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae
           RepID=A5CD93_ORITB
          Length = 219

 Score =  206 bits (525), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 5/180 (2%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
            V   D GT G ++P+ E  +L VIM +L A  +SG + +    F+E++ +  +RP  V 
Sbjct: 35  GVEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVK 94

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
            + +  +  +R++D +     DI+   G +  R+G  +NPL+ + + + L  I+GDD  Q
Sbjct: 95  NLSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQ 154

Query: 135 VAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPG 194
           VAW+K +       KI+LV G+  E+   L   ++FDQ G+L ++  I  VPA +     
Sbjct: 155 VAWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPAIIEQENN 209


>UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T1_LISDA
          Length = 256

 Score =  204 bits (519), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 18/212 (8%)

Query: 13  GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72
                A +LGT    +P+ E DML  IM RL   E +GE+ +  D F ERV ++++RP  
Sbjct: 18  FSPAYAKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTP 77

Query: 73  VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN----------- 121
           V G+  T    +   DP++ LA DI+D  G+V   +G  +NP     +            
Sbjct: 78  VEGLTTTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLS 137

Query: 122 QTLYFINGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175
           + L F++GDD  Q+ + K      +     L+ K ILV+G   ++Q  L  +VYFDQ G 
Sbjct: 138 KILVFLDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGN 197

Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVEFIPAEE 207
           + +R  I  + +  +   G R+   EF  ++E
Sbjct: 198 ITKRFDIKHI-STTAKQAGTRWEVKEFDVSQE 228


>UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM
          Length = 205

 Score =  199 bits (507), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 4/204 (1%)

Query: 1   MRCRGLIALLIWGQSVAAA--DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           M+    + L ++   V     +LG  G  +PV E   L  I+     L ++G      + 
Sbjct: 1   MKVILSVLLAVFTSFVLGDELNLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEK 60

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
            KE V     RPP +  +  T++Y  R +D +  +  DI   EG + A+ G+ +NPL + 
Sbjct: 61  KKEAVKSFLERPPGIK-LPTTDEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFK 119

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
              +   F N DD  Q AW+++     ++SK I V GS+ +  +S   RV+FDQ G L  
Sbjct: 120 RMTKQYCFFNMDDKMQRAWIEQNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVD 179

Query: 179 RLGIDQVPARVSAVPGDRFLKVEF 202
           R  I  VPA V  + G++    E+
Sbjct: 180 RFDIRHVPAIVRQI-GNKIYVEEY 202


>UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2
          Length = 218

 Score =  198 bits (504), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             G+ + +              G  +P+ E   +  I  RL A + SG++       ++R
Sbjct: 17  ATGISSWVAASTPSVEKVGDKIGTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDR 76

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           + R++L    + G+ +  K   R FDPS  L   I D +G++ A  G V+ PL+  P   
Sbjct: 77  INRSALNLQPLEGLAKATKGSVRYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPF 136

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
            ++F +G +P Q+   K+      ES   IL  G+  E+   +D  VY+DQ G + +   
Sbjct: 137 KMFFFDGREPDQIELAKKLAAEYGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQ 196

Query: 182 IDQVPARVSAVPGDRFLKVEFIP 204
           +++VP+ VS   G R       P
Sbjct: 197 LNEVPSLVSQ-EGGRLRVEVMKP 218


>UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia
           endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK
          Length = 213

 Score =  195 bits (496), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 19/215 (8%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+    + +L+   SV   D G  G  + V E   +++I  RL+ L+    + +  +  +
Sbjct: 1   MKLILGLVILVLSSSVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMR 56

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
               +  L P  V GI  T +     +DPS  L  DI+  +G++  + G  +NPL ++ F
Sbjct: 57  RIAKQQILEPAPVLGIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVF 116

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDS 166
           ++ L FI+G    QV W+K +   T               E +IILV G I E+Q+ +  
Sbjct: 117 DRELIFIDGRSQKQVEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGR 176

Query: 167 RVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVE 201
            +YFDQ G L  + GI+QVPA V    G +    E
Sbjct: 177 TLYFDQGGELTNKFGIEQVPAIVVQ-DGKKLKISE 210


>UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus
           ATCC BAA-450 RepID=C9NPU3_9VIBR
          Length = 213

 Score =  186 bits (472), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
           ++ L+    S+ AA+    G  + + E D+   I QRL  LE  G + +     ++R+  
Sbjct: 6   VLVLVGAVCSLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQRDRIRD 65

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQ--------- 116
              +P  V  +  T+   + L DPSVRL A     +G+     G  +NP           
Sbjct: 66  QFEQPMPVS-LSATQSPTTFLVDPSVRLPATY---DGQ---PPGRWVNPFDASTWPSPPL 118

Query: 117 --YVPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNG 174
                + + L F +G D  Q  W  + T        IL  G    + ++L++ VYFDQ G
Sbjct: 119 GMTYHYPRALVFFDGRDRKQRRWATQFTADRP-ITWILTGGRPQTLARTLNAPVYFDQGG 177

Query: 175 VLCQRLGIDQVPARVSAVPGDRFLKVEF 202
            L ++L +  VP+ V  V   R+ +V  
Sbjct: 178 YLSRKLRLRSVPSVV--VQAHRYWEVTE 203


>UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales
           RepID=A1AKL5_PELPD
          Length = 218

 Score =  183 bits (466), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 13/209 (6%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
              I LL+   S  A +LG +G  + + E D L  I +R   ++    + +       R 
Sbjct: 7   LAAIVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWHKVLDK-------RK 59

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
           + N   PP    + R ++  S   D +     D+ D +G +   +G   NPL YV + +T
Sbjct: 60  VENFQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKT 119

Query: 124 LYFINGDDPAQVAW-MKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
           L  I+G DP QV W    +    L+  ++L +G +  + K +   + F  +  + +RL +
Sbjct: 120 LVVIDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRISRPL-FYADRKIIERLKL 178

Query: 183 DQVPARVSAVPGDRFLKVEFI--PAEEGR 209
             VP+ V      R ++V  +  PA   +
Sbjct: 179 KAVPSVVRQK--GRVMEVTEVKLPAGHAK 205


>UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LTZ6_SYNAS
          Length = 277

 Score =  180 bits (458), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 7/198 (3%)

Query: 14  QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73
           Q+   ADLG  G  +PV E D L+ I +R  A++     G+  D  + R    + RP  +
Sbjct: 83  QAAVCADLGNIGATYPVVERDALSEIEERAKAVDW----GKAFDPKRTRERIQNYRPEGM 138

Query: 74  PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133
             +   +K      D S  L  DI D  G +   +G   NPL +V     L  I+G +  
Sbjct: 139 EALPAAKKDRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGNER 198

Query: 134 QVAWMKRQTPPTLESKIILVQGSIPE-MQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192
           Q+ W K  +       ++L+ G     + + L     F  +  + +R  +  VPA +   
Sbjct: 199 QIEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPA-FYADARIVKRFQLKAVPAVIVQ- 256

Query: 193 PGDRFLKVEFIPAEEGRK 210
            G      E+   ++G+K
Sbjct: 257 KGTVMEVREYALDDKGQK 274


>UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A0R7Q5_PELPD
          Length = 200

 Score =  180 bits (457), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+     A++I     A       G  + + E D L  + +R+   +    +        
Sbjct: 1   MKHLLFAAIIIAHTCNAIGSEIVTGMTYQISERDALEELEERVQKADWKKHI-------- 52

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           + +  N  RP  +  + R       L D S  + +DI +N+G +   +G   NPL ++ F
Sbjct: 53  QSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKGELLYPKGYTFNPLDFISF 112

Query: 121 NQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
            +TL  INGDDP QV W K  +    +   + L QG      K L   VY+     L  R
Sbjct: 113 EKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTSKDLARPVYYATKP-LVAR 171

Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
             +  VP+ V A    R ++VE I    G+
Sbjct: 172 FQLRSVPSVVKA--SGRCMEVEEIFINGGK 199


>UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL
          Length = 237

 Score =  174 bits (442), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 76/130 (58%), Positives = 92/130 (70%)

Query: 17  AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76
            A D G  G+++PV EPDML  + QR  +L  SG   ++MDAF +RV RNS RP  V GI
Sbjct: 1   MAKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGI 60

Query: 77  GRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA 136
           G++  Y  R FDPSV L  D++D +GRVFARQGEV+NPL  VPF QTLYFI+GDD  QVA
Sbjct: 61  GKSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVA 120

Query: 137 WMKRQTPPTL 146
           WM+RQ P TL
Sbjct: 121 WMQRQRPQTL 130


>UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter
           RepID=Q4HP76_CAMUP
          Length = 248

 Score =  166 bits (421), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
              +++ LI+  +     LG   ++ P  E DM+ +I + +  ++   E+  + +  +E+
Sbjct: 6   ASFILSTLIYAGNTKELSLG---EVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQ 60

Query: 63  VIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
              N    +P  +  +    +      D +  L  DI+D  G+V  ++G   NP  YV  
Sbjct: 61  AKENVIQYKPKGLTPLTPALEDRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANYVKI 120

Query: 121 NQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
           +  L  I+G +  +V W K+      L  K++L  GS  E+ K L   V F     +  +
Sbjct: 121 SYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEV-FYLMPQIKDK 179

Query: 180 LGIDQVPARVSAVPGDRFLKVE 201
             I++ P+ ++    ++    E
Sbjct: 180 FKIEKTPSIITQ-ESNKIKVSE 200


>UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F048_9HELI
          Length = 219

 Score =  161 bits (409), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)

Query: 1   MRCRGLIALLIWGQSVAAAD-LGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59
           M+   LI  L         D +   G  +  KE D+L +I + LT      E+ +K+   
Sbjct: 1   MKKLFLILSLSASLFAKETDNILNLGKTYEFKERDILELIQEHLTK--NRPELEQKLLGQ 58

Query: 60  KERVIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY 117
           ++++  N    RP  +  +    K  +   D +  L  DI+D+EG +   QG   NP +Y
Sbjct: 59  RDKLKENIKNWRPKDMVKLTPAPKNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKY 118

Query: 118 VPFNQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVL 176
              +  +  IN +D  ++ W+++     T+  +I L +GS  EM +      Y+     +
Sbjct: 119 ARLSYGIVVINANDKEELEWLEKGGYLNTIAYRIFLSEGSYYEMIQKHKQDFYYLL-PEI 177

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEF 202
            +R  +   P+ +    G+  +  E 
Sbjct: 178 AKRFQLKHTPSIIKQ-EGEEIIIQEV 202


>UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SHD8_9BACT
          Length = 216

 Score =  161 bits (407), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 12/211 (5%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
           R    ++ +   + A DLGT+G  + + E D++T I +R +  +      RK +A K+R+
Sbjct: 2   RVFFIMIAFVVPLFAKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRL 57

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIR--DNEGR---VFARQGEVMNPLQYV 118
            + +    A   +   +K  S   D +  L  DI   D  G+   V   +G   NPL Y 
Sbjct: 58  RKEA--GMASMSLPPADKDRSYYVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYA 115

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
              +T   +NG   A++ W  +       +  ++ +G   E+ + L   V F  +    +
Sbjct: 116 DITETYVILNGKREAELQWFSKYYKDDYRAYPLITEGDAFEVAEKLGRGV-FKLDSQFRE 174

Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           R  I+   + +      + ++V+ I  ++ +
Sbjct: 175 RFSIENTVSVIYEDFSRKMMRVDVIKVKDEK 205


>UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia
           multivorans ATCC 17616 RepID=A9AU20_BURM1
          Length = 222

 Score =  160 bits (404), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           +    +A  +      A DLGT    +P+ + D    I       +QSGE+      +++
Sbjct: 6   KLLIGLAASLQLSISYAEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRD 64

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R I +   PP++ GI  +    + L +   ++  D RD+ G+V  R+G V+ PL+ +P  
Sbjct: 65  RTIESIKNPPSL-GIATSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLT 123

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL---------DSRVYFDQ 172
             L FI+G D  QV +  R++  +   KI+L  GS   ++                YFDQ
Sbjct: 124 NGLLFIDGTDARQVEYAIRRS-QSERLKIVLTAGSPYALRVKYAKVPWHGGTGVPFYFDQ 182

Query: 173 NGVLCQRL------GIDQVPARVSAVPGDRFLKV 200
             ++   L       I+ VPA +    GDR    
Sbjct: 183 RRMIISTLSKLYNIQINSVPAAIFQ-QGDRLAVQ 215


>UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN
          Length = 527

 Score =  152 bits (385), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 18/199 (9%)

Query: 6   LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIR 65
            +A+L+   S   A     G L+ + EPD L  I +R+  ++   E+       K+R   
Sbjct: 11  FVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELN------KDREKW 62

Query: 66  NSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLY 125
            + +      +  T++  +R   P      +++D +GR+   +G   NPL +V   Q L 
Sbjct: 63  GAFKGVP---LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQRLI 119

Query: 126 FINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
            +   +  Q  W+K  +  T    II   G + E+ + +     F  +  L QRL I  V
Sbjct: 120 IV---EKGQEDWLK--SIATESDMIIYASGDVIEVSQRIGRNA-FILDKNLQQRLDIKVV 173

Query: 186 PARVSAVPGDRFLKVEFIP 204
           P+ +    G+  +  EF  
Sbjct: 174 PSIIQQ-EGEHLIIQEFSK 191


>UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas
           RepID=B7XGR9_PSEPU
          Length = 412

 Score =  151 bits (383), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 21/195 (10%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLGT G    + EPD++ V  QR+  L+      R +  F +    +         +  
Sbjct: 217 GDLGTIGSTQEIIEPDLMEVAKQRIAELDTDAMKKRAIARFWDNHKGH--------PLPP 268

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             +  +RL DPSV +  DI D++GRV  + G  +NPL  +PF+Q L  I+   P QVA  
Sbjct: 269 VTESATRLVDPSVIVPDDILDSQGRVVQKAG-RINPLDMMPFDQKLVVIDPTQPWQVALA 327

Query: 139 KRQTPPTLESKIILVQGS----------IPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           KR+     E+  + V  +             +Q SLD+ +Y      + +R  I + P+ 
Sbjct: 328 KREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYL-LPPDMAERFQILRAPSV 386

Query: 189 VSAVPGDRFLKVEFI 203
           V+A   + F+  E  
Sbjct: 387 VTA-DTENFIVREVA 400


>UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris
           RepID=Q8L272_PROVU
          Length = 416

 Score =  149 bits (376), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G    + E  +L +I Q++  L+        +D + ++                
Sbjct: 226 GDLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEFTDF--------PP 277

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             K+  +  +PSV +  DI   +G+V A+QG  +NPL  +PF   L F +     Q    
Sbjct: 278 ALKHNQKFINPSVVIPQDILAPDGQVVAKQG-RINPLDVIPFRLKLIFFDARIDWQRKIA 336

Query: 139 KRQTPP-TLESKIILVQGS-----IPEMQKSL-----DSRVYFDQNGVLCQRLGIDQVPA 187
           +R+        + IL+  +         Q +       SR+Y  Q G +  R GI  VP+
Sbjct: 337 RREYQNAEPGIEPILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGITSVPS 395

Query: 188 RVSAVPGDRFLKVEFIPAEEGRK 210
            V+A   D+   +   P +E  K
Sbjct: 396 IVTAT--DKQYVINEYPEDEANK 416


>UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria
           RepID=C6YK86_VIBCH
          Length = 406

 Score =  148 bits (373), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 22/200 (11%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
             LG  G +  + EPD++ V MQRL +L+        + A K++ I           + +
Sbjct: 211 GSLGQRGPIHSILEPDLMQVAMQRLQSLD--------LGALKKKAIERFWSRQTFTDLPK 262

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA-- 136
             +Y  R  DP++ +   + D  GR     G  +NPL+ +PF Q L   N  +  +V   
Sbjct: 263 ATQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAV 322

Query: 137 --WMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
             W++ Q        +I  Q        S+  ++K+LDS VY   N  L QR  +   P+
Sbjct: 323 AHWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPS 381

Query: 188 RVSAVPGDRFLKVEFIPAEE 207
            V    G  F ++E IPA+E
Sbjct: 382 FV-QAKGLAF-EIEEIPAKE 399


>UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX
          Length = 421

 Score =  144 bits (363), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 32/212 (15%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G +  + EPD++ V  +RL  ++   +  + ++ F  +   N         + R
Sbjct: 220 GDLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFN--------ELPR 271

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFING 129
             K  +R  DPSV + +DI   +G VFA  G+V+NPL            PF Q +   + 
Sbjct: 272 APKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDP 331

Query: 130 DDPAQVAWMKRQTPP-TLESKIILVQG------------SIPEMQKSLDSRVYFDQNGVL 176
            D  Q+  + ++ P   LE  +  +              S   +  + D+ VY      L
Sbjct: 332 LDKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDL 390

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208
             R  ++  P+ ++A  G +F+  E       
Sbjct: 391 ITRFELEHTPSVITAR-GKKFVVRELAEEGGE 421


>UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1
          Length = 503

 Score =  143 bits (362), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 23  TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82
             G ++PV+E  ++  + +R    +  G         K+R + ++ +   +  +   +++
Sbjct: 307 VAGTIYPVEEKSIIKELEERAQKYDWEG--------AKKRAVADTWKNQWMVDLPPAQEH 358

Query: 83  GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142
              L DP+VR+  D++D +GRV A  GE++NPL   P N T+   +  +P Q+ W ++Q 
Sbjct: 359 KEFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQY 418

Query: 143 PPTLESKIILVQ----------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192
              L S  ++              + ++++  + +V F  N  +  R  I   PA ++  
Sbjct: 419 RQRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-T 476

Query: 193 PGDRFLKVEFIPAE 206
             D+F    F  AE
Sbjct: 477 DQDKFRITLFSEAE 490


>UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3
           RepID=A0L2Z3_SHESA
          Length = 431

 Score =  135 bits (341), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 75/187 (40%), Gaps = 17/187 (9%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           +  LG   D + + E DML +I Q+L  ++   +    +  F  R               
Sbjct: 225 SGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTE-------S 277

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAW 137
             ++      DP VR   D    +G+ FA+ G+V++P   +     L+ I+     Q+AW
Sbjct: 278 LKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQLAW 337

Query: 138 MKRQTPPTLESKIILVQGSIPE---------MQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           M      T   ++ ++  ++P          +Q  L  R+Y  Q   +  R  ++ +PA 
Sbjct: 338 MNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHLPAL 396

Query: 189 VSAVPGD 195
           V    G+
Sbjct: 397 VDLFKGE 403


>UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2
           RepID=C1MEJ2_9ENTR
          Length = 437

 Score =  123 bits (308), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 22/195 (11%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G    V E +++  + + +  L+  G   + +D +  R +              
Sbjct: 245 GDLGVAGPAVGVVEKNLIDELQESVAKLDFDGMKKKAIDNYWPRQVFQEF--------PE 296

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             K  +R  DP+V +  +I    G + A++G   NPL  +PF   L F +  +  Q  + 
Sbjct: 297 ATKRTTRTIDPTVIIPQNITSPNGDIVAKRG-RFNPLTVMPFTIKLIFFDAREEWQRQFA 355

Query: 139 KRQTPPTLES-KIILVQGSIP--------EMQKSLD--SRVYFDQNGVLCQRLGIDQVPA 187
           + Q   T  S   ILV  ++         + +K     +R+Y  Q G + +R G+  VP+
Sbjct: 356 RYQFEHTPASLTPILVTTNVYGDGWQTFRDTKKEYGDFARLYMIQPG-MAERYGLINVPS 414

Query: 188 RVSAVPGDRFLKVEF 202
            V+A    RF+  E+
Sbjct: 415 IVTA-DSKRFINDEY 428


>UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus
           ferrooxidans ATCC 23270 RepID=B7J843_ACIF2
          Length = 422

 Score =  122 bits (306), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 15/176 (8%)

Query: 23  TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82
             G  W V EP+M+++  Q++          + ++  KER   N         +  +   
Sbjct: 234 IHGHTWKVAEPNMISIFEQKIKTFNW----KKTVEQAKERGWENMSTRLG-DALPDSLHG 288

Query: 83  GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--LYFINGDDPAQVAWMKR 140
            S  ++PS+   A IR   G+V  R+G+ +NPL   PF  T      N     QV   + 
Sbjct: 289 KSYTYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVFNPAQAWQV--AQV 346

Query: 141 QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARVS 190
           Q   +    ++++   +P+  +  D  V   Q+ V      L  RLGI++VPA + 
Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALIQ 402


>UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1NGT0_9SPHN
          Length = 211

 Score =  109 bits (273), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 18/200 (9%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
             ++AL      +AA    T G  WP+ EPD +           ++            R 
Sbjct: 18  ALMLALACHEPGLAATS--TIGRTWPIAEPDAMAE------IEARAARAPSLALRLGPRS 69

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
             ++L+      +G+T     R   P   +  DIR  +GR+   +G   NPL YV   Q 
Sbjct: 70  TWSALQAAP---LGQTRVDRVRSLVPFYTVEEDIRLPDGRLLYPKGFTFNPLDYVSLPQR 126

Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183
           L  ++  D   + W  +Q        I+L  G   ++ +     + F     + +RLG+ 
Sbjct: 127 LVIVHPRD---LGWALKQ--ARFTDFILLTAGDALDLSERSGRPL-FILEERVKERLGLT 180

Query: 184 QVPARVSAVPGDRFLKVEFI 203
             P  V+   G + +  E+ 
Sbjct: 181 VAPVIVAQ-QGKKLVLTEYA 199


>UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9TFF4_RICCO
          Length = 239

 Score =  107 bits (268), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 16/188 (8%)

Query: 17  AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76
            A D G   ++WP+ E D+  ++++    ++ S       ++ ++ +   S R      +
Sbjct: 18  YAKDYGVQANVWPITEIDIRRLLLESAARVDWSKVNSEAQESGRQYLSNLSKRQ-----L 72

Query: 77  GRTEKYGSRLFDPSVRLAADI----RDNEG----RVFARQGEVMNPLQYVPFNQTLYFIN 128
              +      FDPS+ L +DI    +  +G    +V   +G  +NPL            +
Sbjct: 73  PTIDHSAVSYFDPSIVLTSDIQAPVKQADGTYQWQVLYPKGTKVNPLDTARPVTAFLMFD 132

Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGS--IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186
           G  P QVA +K+    + +    +  GS  + ++  S    VY   +  +  R  ++ +P
Sbjct: 133 GSQPEQVALVKKVLARSGDRIEAVEAGSGDLSQLGDSFTQTVY-HADDAMIARFQVNYLP 191

Query: 187 ARVSAVPG 194
           + V    G
Sbjct: 192 SLVFPGTG 199


>UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW n=1
           Tax=Arsenophonus nasoniae RepID=D2U0Q6_9ENTR
          Length = 312

 Score = 73.8 bits (180), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLGT G    + E +ML +I + +  L+         +  K+  I    +   +     
Sbjct: 220 GDLGTQGPAKSIVERNMLDLIKEGIDNLD--------FERMKKEAIERYWKNKKIYKFPV 271

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQG 109
             +      DPSV +  DI    G V A++G
Sbjct: 272 ATENSVHYVDPSVVIPEDIISPNGAVVAKKG 302


>UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1
           RepID=C0QUV3_PERMH
          Length = 203

 Score = 63.4 bits (153), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 86/208 (41%), Gaps = 19/208 (9%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
              ++L + G   +  +LGT+G ++              +  ++++ +  +    + +R 
Sbjct: 6   SIFLSLGLIGFGYSLENLGTFGKVYQ-------IEEEDIIEYIKKNAKPPKFSREYIQRK 58

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
           I  + +      +   ++   R       +  DI   EG++ A++G  +N L+ +  + T
Sbjct: 59  IHAAAQVD--VNLPVNKRDNVRYEKIIYTVPNDII-IEGKLIAKKGTKINVLKEIKLHNT 115

Query: 124 LYFI-NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL-DSRVYFDQNGVLCQRLG 181
              + +   P  + W K+       +  ++ QG+I ++QK   D R+Y     VL   L 
Sbjct: 116 YVILADYMLPYFLDWNKK-----TNAVYLITQGNILDLQKKYPDLRIYAGFPKVLSS-LK 169

Query: 182 IDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           +  +P+ V     D+ + +E     + +
Sbjct: 170 VKSIPSIVYQYQ-DKLVILEKGFPNDKK 196


>UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus marinus ATCC 50983
           RepID=C5LHC5_9ALVE
          Length = 940

 Score = 47.2 bits (111), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           ER    + R   +  +   +    R  D    +A  ++D  G+    Q E +NP      
Sbjct: 429 ERRGFGANREYLIQQLTAAQADLQRHKDAFRTIAQSLKDRRGQPLNPQAEFINPRSAKQI 488

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKII 151
            Q L F N D+P  + W+ R+     E++ I
Sbjct: 489 RQ-LLFGNPDEPDHLRWVARRVRAGEEAEWI 518


>UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia tsutsugamushi str.
           Boryong RepID=A5CF18_ORITB
          Length = 50

 Score = 42.9 bits (100), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 152 LVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191
           LV G+  E+   L   V+FDQ G L  +  I  + A +  
Sbjct: 2   LVNGNHIELNNLLGRHVFFDQFGFLSMKFKIQDMLAIIKE 41


>UniRef50_B8LDJ9 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
           RepID=B8LDJ9_THAPS
          Length = 254

 Score = 40.2 bits (93), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 1/55 (1%)

Query: 23  TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           T G+ WP  E D L    ++  A+ ++    R+    ++ V     R  A+    
Sbjct: 194 THGNTWPYSEEDALEETKKK-KAMNRADAWDRRQTQRRDWVHEKIERGKALSNST 247


Searching..................................................done


Results from round 3


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI           269   3e-71
UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=...   241   1e-62
UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvula...   241   1e-62
UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW ...   239   5e-62
UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW ...   239   6e-62
UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serrati...   237   2e-61
UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneum...   236   4e-61
UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Maripro...   235   9e-61
UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW ...   234   2e-60
UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular orga...   232   5e-60
UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW ...   232   6e-60
UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax...   231   1e-59
UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax...   228   8e-59
UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6...   228   1e-58
UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acineto...   228   1e-58
UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkhol...   227   2e-58
UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=...   225   8e-58
UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax...   225   9e-58
UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A...   224   1e-57
UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID...   217   3e-55
UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5...   216   5e-55
UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5 T...   214   1e-54
UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH      214   1e-54
UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=...   213   3e-54
UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW ...   211   1e-53
UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW ...   210   2e-53
UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW ...   209   4e-53
UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Ricket...   207   3e-52
UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=C...   207   3e-52
UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_...   205   5e-52
UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsiea...   204   1e-51
UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=...   199   4e-50
UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_...   199   5e-50
UniRef50_C4Z004 Type-F conjugative transfer system protein TraW ...   195   8e-49
UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax...   193   2e-48
UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax...   189   5e-47
UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophu...   184   2e-45
UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio ...   182   5e-45
UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicob...   171   1e-41
UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campyloba...   170   2e-41
UniRef50_A9AU20 Putative type IV secretion system protein n=1 Ta...   168   9e-41
UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitro...   166   4e-40
UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=...   166   4e-40
UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomo...   165   9e-40
UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU...   163   3e-39
UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgari...   157   2e-37
UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteob...   151   2e-35
UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp....   148   9e-35
UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX   148   1e-34
UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1    147   3e-34
UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomo...   141   1e-32
UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewane...   141   1e-32
UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus...   135   7e-31
UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Ac...   125   8e-28
UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Perseph...   120   5e-26
UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW...    84   3e-15
UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus mar...    82   1e-14

Sequences not found previously or not previously below threshold:

UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia ts...    42   0.010
UniRef50_A0NRL0 Putative uncharacterized protein n=1 Tax=Labrenz...    41   0.033


CONVERGED!
>UniRef50_P18472 Protein traW n=42 Tax=root RepID=TRAW_ECOLI
          Length = 210

 Score =  269 bits (689), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 210/210 (100%), Positives = 210/210 (100%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK
Sbjct: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF
Sbjct: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL
Sbjct: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210
           GIDQVPARVSAVPGDRFLKVEFIPAEEGRK
Sbjct: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210


>UniRef50_B2VB13 TraW protein n=1 Tax=Erwinia tasmaniensis RepID=B2VB13_ERWT9
          Length = 203

 Score =  241 bits (616), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 82/201 (40%), Positives = 121/201 (60%), Gaps = 1/201 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+ + LI L     SV A D+GT+G L+P+ EPDM+ +I  RL  ++++GEM R  +  +
Sbjct: 1   MKLKILILLTTVSISVMAKDMGTFGQLFPIDEPDMMDLINGRLKHMDENGEMARIHEKAE 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           + V  +++RPP V G+    +  + LFDPS     DI D  G     +G+  NPL ++PF
Sbjct: 61  KDVKAHAVRPPPVSGVSEARQDKTWLFDPSFVADRDITDGRGHYITHKGDRKNPLDFIPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
             TLYFINGD+PA++ W+K +   ++  KIILV+GS+PE  + LD +++FDQ GV+  R 
Sbjct: 121 KSTLYFINGDNPAELQWVKNKIKYSINFKIILVKGSVPETSEKLDEQIFFDQYGVMVTRF 180

Query: 181 GIDQVPARVSAVPGDRFLKVE 201
           GI   PA V    GD     E
Sbjct: 181 GITHTPAEVFQ-EGDMLRVKE 200


>UniRef50_A3VN17 Putative uncharacterized protein n=1 Tax=Parvularcula bermudensis
           HTCC2503 RepID=A3VN17_9PROT
          Length = 205

 Score =  241 bits (616), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 81/204 (39%), Positives = 111/204 (54%), Gaps = 2/204 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R     A L       A DLG  G ++PV EPD+   I  +L  LE +GE+ R  +  ++
Sbjct: 3   RAIAFAAWLALSSEATAKDLGVRGAVFPVTEPDLFAEIAGKLARLEAAGEIDRINERLRQ 62

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + ++ RP  VPG+ RT+       DP++ +  DI   +G+V AR GE  NPL YVP  
Sbjct: 63  RALASAERPSPVPGLTRTDTPRRFHVDPTITVLDDIVTPDGQVIARAGERFNPLDYVPMR 122

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           QTL F +GDD  QVAW K +         +ILV G + E+ +  + +++FDQ G L  R 
Sbjct: 123 QTLLFFDGDDERQVAWAKDRMHDGEALLSLILVAGPVLELTRDWERQIFFDQGGTLTTRF 182

Query: 181 GIDQVPARVSAVPGDRFLKVEFIP 204
           GI QVPARVS   GD  L  E +P
Sbjct: 183 GITQVPARVSR-EGDLLLVEEVMP 205


>UniRef50_C8QDR9 Type-F conjugative transfer system protein TraW n=3
           Tax=Enterobacteriaceae RepID=C8QDR9_9ENTR
          Length = 206

 Score =  239 bits (610), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 84/205 (40%), Positives = 125/205 (60%), Gaps = 2/205 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   L+ +L +     A DLGT G L+P+ EPD+LT I QRL  +++SGE+ R     + 
Sbjct: 4   RLAVLLLVLTFPLFTGAKDLGTLGHLFPIAEPDLLTFIGQRLQGMKESGELDRIQREAEA 63

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           RV  +++RP  V G+    K  S  +DP+  +   IRD +G V AR G+ +NPL  VP++
Sbjct: 64  RVKAHAVRPEPVAGLTPAVKDRSFRYDPTFTVQETIRDMKGNVIARAGDRVNPLDKVPYS 123

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
           +TLYFI+GD+PAQ+ W+K+Q       K+ILV+G+I +   +LD  VYFDQ G L  + G
Sbjct: 124 ETLYFIDGDNPAQMRWVKQQLTGQQNFKVILVKGNIRDSSLALDEPVYFDQYGTLTTKFG 183

Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206
            +  P RV+    DR+L+VE +  +
Sbjct: 184 FEHTPVRVTRD--DRWLRVEEVALK 206


>UniRef50_A5VGR7 Type-F conjugative transfer system protein TraW n=2
           Tax=Sphingomonadales RepID=A5VGR7_SPHWW
          Length = 217

 Score =  239 bits (609), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 77/206 (37%), Positives = 105/206 (50%), Gaps = 2/206 (0%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
           C G   L + G +  A D GT G  +P+ EPD+L  I  RL   E SGE+ R    F +R
Sbjct: 13  CLGGATLFLVGSASEARDYGTAGQAFPIIEPDLLATIEARLRHAEASGELARTNALFAKR 72

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           V     RP  V GI   ++  S  FDPSVR+  D+RD +G + A+ G+ +NPL +V  +Q
Sbjct: 73  VEAKVRRPDPVAGISPAQETRSWDFDPSVRIDHDVRDQKGNMIAKAGQKVNPLDFVGIHQ 132

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L F++GD+  Q+ W   +    +++KII V+GS  E       R YFDQ G L  R GI
Sbjct: 133 DLVFVDGDNAEQLDWACGKYSD-VKAKIIFVKGSPIEAMSQRKRRFYFDQEGKLTGRFGI 191

Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208
           +  PA VS   G      E       
Sbjct: 192 EHTPAVVSQA-GRVMRVTEHALKGRA 216


>UniRef50_D1S166 Putative uncharacterized protein n=1 Tax=Serratia odorifera 4Rx13
           RepID=D1S166_SEROD
          Length = 208

 Score =  237 bits (604), Expect = 2e-61,   Method: Composition-based stats.
 Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 2/202 (0%)

Query: 1   MRCR-GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59
           M+    +  ++     V AA+LG  G L+P+ E DM+  I QRLTA+EQSGE+ +     
Sbjct: 1   MKLAWVMGLIIGLTGPVYAANLGVKGALFPIAEQDMVDFIKQRLTAMEQSGELAQLQKET 60

Query: 60  KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119
           +ERV  +++RP  V G+  T++  +  +DP+  +   I D  G V A +G+ +NPL  + 
Sbjct: 61  EERVKEHAVRPTPVDGLSPTQEAHTFYYDPTFVVGQTITDMAGNVIALKGQRVNPLHTIT 120

Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
           ++QTLYFI+GDD  Q++W+ +        K+ILV G++ +   +LD  VYFDQ+G L Q+
Sbjct: 121 YDQTLYFIDGDDKQQMSWIGKAIKGQSNFKVILVNGNVKKTSDALDEPVYFDQHGSLTQK 180

Query: 180 LGIDQVPARVSAVPGDRFLKVE 201
            G   VPAR+ AV GDR    E
Sbjct: 181 FGFKHVPARI-AVEGDRMRIDE 201


>UniRef50_Q5ZTS5 TraW n=1 Tax=Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1 RepID=Q5ZTS5_LEGPH
          Length = 202

 Score =  236 bits (602), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 2/202 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+   LI  +++     A D G +G  + + E D L  I Q++  ++ +GE       FK
Sbjct: 1   MKKLLLIICMLYLPFAEAKDYGVFGKTFEIAEIDFLEYIQQKMKGMQVNGEWKTVQSEFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +RV  +  RP  +  + R E   +  F+PS+ +  D++D+ G+V  +QG V+NPL  V  
Sbjct: 61  KRVKEHVARPTPIR-LPRAEDNRTWFFNPSLAVPYDVKDSHGQVIVKQGTVINPLDRVGL 119

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           + TL F +GDD AQVAW+ ++     + K+IL  GS+ E+   L   +YFD NG L  + 
Sbjct: 120 SSTLLFFDGDDEAQVAWVTQELTQHQKVKLILTSGSVKEVANQLKQAIYFDLNGFLVAKF 179

Query: 181 GIDQVPARVSAVPGDRFLKVEF 202
            I  +PARV    G R    E 
Sbjct: 180 QIKYLPARVFQA-GKRLQINEV 200


>UniRef50_Q0F366 Putative uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans
           PV-1 RepID=Q0F366_9PROT
          Length = 228

 Score =  235 bits (599), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 74/196 (37%), Positives = 102/196 (52%), Gaps = 2/196 (1%)

Query: 10  LIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLR 69
           ++        DLG  G  +P++E D L  I +RL+A+++SGE+ R  +       +   R
Sbjct: 34  ILASVQNDRGDLGVIGPTYPIRERDFLEYIQKRLSAMQKSGELQRLQEREAAIAKKRIER 93

Query: 70  PPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFING 129
           P  V GI RTEK      DP++ L   IRD +GR+    G  +NP  ++  ++ L FI+G
Sbjct: 94  PKPVSGITRTEKTRVFHIDPTLTLDHAIRDAKGRILYMPGTKVNPFDHLAMSKHLLFIDG 153

Query: 130 DDPAQVAWMKRQTPP-TLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           DD  QVAW          + K ILV+GS  E+ K    RVYFDQ GVL ++L I  VPA 
Sbjct: 154 DDKEQVAWALTMAKHYDGQVKTILVKGSPTELMKQWKRRVYFDQQGVLTRKLHIRHVPAI 213

Query: 189 VSAVPGDRFLKVEFIP 204
           VS   G R    E  P
Sbjct: 214 VSQ-DGKRLRVAEMAP 228


>UniRef50_D0SGY1 Type-F conjugative transfer system protein TraW n=1
           Tax=Acinetobacter johnsonii SH046 RepID=D0SGY1_ACIJO
          Length = 213

 Score =  234 bits (596), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 63/203 (31%), Positives = 106/203 (52%), Gaps = 3/203 (1%)

Query: 8   ALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNS 67
           AL+    +   AD GT G ++ + E + L  I ++L A+E++GE+ +K     +R + ++
Sbjct: 12  ALIGCVTATMGADFGTHGQVYKITEKNALDAIYEKLKAMEKTGELAKKKKEAIDRSMHSA 71

Query: 68  LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFI 127
             P  V GI    +     FDP++ L+ +I  +EG + A  G V+NPL  +  ++TL F 
Sbjct: 72  KNPKPVEGITTATEKKVYSFDPTMTLSNNITTDEGHIVAPAGTVINPLDTITMSRTLVFF 131

Query: 128 NGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186
           +G+   QV  ++R           +LV G+  E+ K    +VYFDQ G +  R GI  VP
Sbjct: 132 DGNKKDQVEAVERLIKVYDRKVTPVLVNGTWLELTKKWKRQVYFDQYGYMTSRFGIKAVP 191

Query: 187 ARVSAVPGDRFLKVEFIPAEEGR 209
           A V      + L++  +PA+E +
Sbjct: 192 AIVRQK--GKLLEITEMPAQELK 212


>UniRef50_A2SNI4 Sex pilus assembly protein n=4 Tax=cellular organisms
           RepID=A2SNI4_METPP
          Length = 230

 Score =  232 bits (593), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 70/204 (34%), Positives = 105/204 (51%), Gaps = 2/204 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           +        L+   S  A  LG +G++W ++EPD +  +  +LT +E+ GE+ R  + ++
Sbjct: 17  VTAVHAAVFLLAAPSATAQQLGVYGNVWEIREPDAIDALKGKLTQMEKKGELKRMWENYR 76

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNE-GRVFARQGEVMNPLQYVP 119
           +R + +   P  + GI +      R FDPSV    D+ D   G++  + G  +NPL Y P
Sbjct: 77  DRYVASIENPAPIRGISKATAPAVRTFDPSVVFGDDVTDPSSGKLLVKAGTRVNPLDYTP 136

Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
             + L FI+G DPAQVA+ K ++      K+ILV GS  E+ +      YFDQ G L  R
Sbjct: 137 LTKALIFIDGRDPAQVAFAKARSDANPRDKVILVAGSFLELNRKWGRVTYFDQRGHLTTR 196

Query: 180 LGIDQVPARVSAVPGDRFLKVEFI 203
            GI +VPA VS   G      EF 
Sbjct: 197 FGIKRVPAVVSQ-KGRALQIEEFA 219


>UniRef50_C5V0C0 Type-F conjugative transfer system protein TraW n=1 Tax=Gallionella
           ferruginea ES-2 RepID=C5V0C0_9PROT
          Length = 214

 Score =  232 bits (592), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 61/197 (30%), Positives = 102/197 (51%), Gaps = 2/197 (1%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           + +L+      + DLG  G  + + E D++ +I  +L  +E++GE+ +  + +K RVI  
Sbjct: 17  LLILLAAPPAMSDDLGVIGKTYDITERDLIEIIQNKLKRMEKTGELAKFQNDYKNRVIDG 76

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYF 126
              P  +PGI  T    +  +DPS+    DI D  G++   +G  +NPL Y+ +N+ L F
Sbjct: 77  IEHPKPIPGIQATATANTHYYDPSMVTDKDIADATGKILYPRGTRVNPLDYIGWNKYLLF 136

Query: 127 INGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQV 185
           ++G D  Q+ + K+ T  +    K++L+ G   E+ +     +YFDQ G L +R  I QV
Sbjct: 137 VDGRDAKQLEFSKKITAASDRPVKLVLIAGEPLELMRKWKMTIYFDQGGKLTKRFAITQV 196

Query: 186 PARVSAVPGDRFLKVEF 202
           PA V    G R    E 
Sbjct: 197 PAIVRQ-EGKRLRIDEL 212


>UniRef50_C5ANK9 Sex pilus assembly and synthesis protein n=2 Tax=Burkholderia
           glumae BGR1 RepID=C5ANK9_BURGB
          Length = 212

 Score =  231 bits (590), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 104/209 (49%), Gaps = 3/209 (1%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           R   + A+++      + DLG  G  +P+ E D + ++  RL  L+ SG +       + 
Sbjct: 6   RWIAIAAVVLTAAGAHSEDLGVVGPTYPIAEHDAVAMLKHRLAQLQASGGLAALEQRARR 65

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + +    PAVPG+    +Y  RL DP+V  +  + ++EG V    G  +NPL  V  +
Sbjct: 66  RAMHDITDMPAVPGVSTVTEYAQRLIDPTVTYSKPVLNDEGAVIVPAGTRINPLDLVTLH 125

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           + L F +G DPAQV   +        + K IL  GS  ++ KS   +VYFDQ G L QR 
Sbjct: 126 ERLVFFDGRDPAQVKAARALADREGAAVKPILTGGSWFDLTKSWKRQVYFDQQGRLTQRF 185

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           GI +VPA +S       L+ E  PA + R
Sbjct: 186 GITRVPAVISQRGNQLLLEEE--PAAQLR 212


>UniRef50_O85939 Sex pilus assembly and synthesis protein n=4 Tax=cellular organisms
           RepID=O85939_SPHAR
          Length = 231

 Score =  228 bits (582), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 73/202 (36%), Positives = 100/202 (49%), Gaps = 4/202 (1%)

Query: 3   CRGLIALLIWG--QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
             GL  L+ W     + AAD G  G  +P+ E D+LT I  RL  LE +G + R     +
Sbjct: 10  ASGLALLVGWPGISGLRAADYGQMGQTFPIIETDLLTTIETRLRTLEANGGIERMQRQMQ 69

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           E+ + +  RP  V G+         LFDPS+    DI D +G + A +G  +NPL  V  
Sbjct: 70  EQAVASVRRPKPVDGMTPASVKREWLFDPSIVTEDDIVDAKGNLIAARGTRVNPLDMVQL 129

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +Q L F++GD+ A++AW  + T     +KII V GS  +  K    R YFDQ G L  + 
Sbjct: 130 SQALVFVDGDNAAELAWAVK-TWSDARAKIIFVSGSPFDAMKPWQRRFYFDQGGTLTAKF 188

Query: 181 GIDQVPARVSAVPGDRFLKVEF 202
           GI   PA VSA  G      E 
Sbjct: 189 GIRHTPAVVSAA-GANLKISEV 209


>UniRef50_Q1N8Z6 TraW n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N8Z6_9SPHN
          Length = 212

 Score =  228 bits (581), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 73/200 (36%), Positives = 105/200 (52%), Gaps = 2/200 (1%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             GL           A DLG  G  +P+ E D+  VI  +L  +++SG+M +        
Sbjct: 11  AAGLAFAFSGHAPALAKDLGVMGATFPLVEQDLFAVISAKLHRMQESGQMDKINRDLAAH 70

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
               + RP  V G+GRT+   S  +DPS+ +  DI D +G VFA  G+ +NPL  V   Q
Sbjct: 71  AAEKARRPNPVGGLGRTQDERSWFYDPSIVVDKDIADQKGNVFAHAGQRVNPLGLVNLRQ 130

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L FI+GD+     W   Q    +++KIILV+G+  ++ K+ D R+YFDQNG L  + GI
Sbjct: 131 KLIFIDGDNAKDFQWALDQGSE-VQTKIILVKGAPIDLMKASDRRIYFDQNGYLTHKFGI 189

Query: 183 DQVPARVSAVPGDRFLKVEF 202
           + VPA V    GD+ L  E 
Sbjct: 190 ENVPAVVKQ-EGDKLLVREV 208


>UniRef50_B2I3Z4 Putative uncharacterized protein n=1 Tax=Acinetobacter baumannii
           ACICU RepID=B2I3Z4_ACIBC
          Length = 212

 Score =  228 bits (581), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 110/210 (52%), Gaps = 3/210 (1%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           +   L+ +L    +  + DLG  G ++ ++EPD L  I  +L ALE++GE+ RK      
Sbjct: 5   KYLFLLPILAISFNSNSKDLGVNGAVYKIQEPDALEQIYTKLKALEKTGELKRKQQEAVS 64

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R + ++  P  V  I        RLFDP++ L+ DI+ +EG V AR G  +NPL  V   
Sbjct: 65  RAMNSAKNPKPVENISTVTVKKVRLFDPTMHLSNDIKTDEGVVVARAGTSVNPLDTVTMT 124

Query: 122 QTLYFINGDDPAQVAWMKRQTP-PTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +TL    G DP QV  +K+ T         ILV GS  ++ ++   +VYFDQ G + +RL
Sbjct: 125 KTLVLFKGSDPEQVQAVKKLTELYKNRITPILVDGSWFDLTRAWKRQVYFDQYGYISKRL 184

Query: 181 GIDQVPARVSAVPGDRFLKVEFIPAEEGRK 210
            I  VP+ V      + L++  +PA+E  K
Sbjct: 185 QITSVPSIVRQ--NGKMLEISEVPAKELVK 212


>UniRef50_A0B4N9 Putative uncharacterized protein n=4 Tax=Burkholderiales
           RepID=A0B4N9_BURCH
          Length = 213

 Score =  227 bits (579), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 72/210 (34%), Positives = 106/210 (50%), Gaps = 3/210 (1%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           +     + L     S  A DLG  G  +P+ E D + ++ +RL  L  +G +       +
Sbjct: 6   VTWIAALTLAASPISAVADDLGVVGPTYPIAEHDAIVMLKRRLLELRANGGLATVERRAR 65

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +R + +    P VPGI    +Y SRL DP+V  A  + ++EG V    G  +NPL  V  
Sbjct: 66  QRALHDVTSLPPVPGISTVSEYSSRLIDPTVTYAKPVTNDEGAVIVAAGTRINPLDIVTL 125

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLE-SKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
           ++ L F +G DPAQV  ++     + +  K IL  GS  ++ KS   +VYFDQ G L QR
Sbjct: 126 HERLVFFDGRDPAQVKAVQALASRSGDSIKPILTAGSWFDLTKSWKRQVYFDQQGRLSQR 185

Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
            GI +VPA +S       L+ E  PAE+ R
Sbjct: 186 FGITRVPAVISQRGNQLLLEEE--PAEQLR 213


>UniRef50_D2TZZ5 Conjugal transfer pilus assembly protein TraW n=1 Tax=Arsenophonus
           nasoniae RepID=D2TZZ5_9ENTR
          Length = 198

 Score =  225 bits (574), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 1/198 (0%)

Query: 9   LLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSL 68
           L+ +     A ++GT+GD+W + E ++LTVI  ++ +    G   +    ++ERV +N+ 
Sbjct: 2   LMSFSAGSLATEIGTFGDVWEIAEQNLLTVIEDQVESA-FLGNEEKIHQEWRERVTKNAE 60

Query: 69  RPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFIN 128
           RP  V G+ +  K  +R FDPS  +  DIRD+ G VFA +G+ +NP    PFN+TLYFI+
Sbjct: 61  RPEPVQGLTKAVKNITRTFDPSFTVTKDIRDHNGTVFAHKGQKVNPFDITPFNETLYFID 120

Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           GDD  Q+AW+  Q P T   KIILV G+I    ++L+ R+YFDQ GVL  R GI+++P+ 
Sbjct: 121 GDDEKQLAWVAAQKPATAIHKIILVNGNIKTTAETLNQRIYFDQGGVLVNRFGIEKLPSV 180

Query: 189 VSAVPGDRFLKVEFIPAE 206
           V  +P    L++  +  +
Sbjct: 181 VDEMPNHSLLRITEVAVQ 198


>UniRef50_Q5NX38 Sex pilus assembly and synthesis protein n=1 Tax=Aromatoleum
           aromaticum EbN1 RepID=Q5NX38_AZOSE
          Length = 211

 Score =  225 bits (573), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 67/202 (33%), Positives = 103/202 (50%), Gaps = 2/202 (0%)

Query: 2   RCRGLIALLIWGQSVAAADLG-TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           +        +   S +A  +G T+G  WP+ EPDM+  I   +  L+ +GEM      F+
Sbjct: 9   KILLACLTALMCSSASAERIGSTYGQTWPIAEPDMVEQIKDLIKRLQSNGEMDAMQRRFQ 68

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           E  +     PP VPGI    +  +  FDPSV  + D+ D +GRV A+ G V NP  Y+  
Sbjct: 69  EETLATFSDPPPVPGISYATENKTWHFDPSVSFSEDVVDEQGRVVAKAGVVYNPFNYIAL 128

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
           +++L FI+  D  QV+   R       ++++LV GS  E+Q     ++Y+DQ+G L Q  
Sbjct: 129 SKSLVFIDARDEKQVSIAARYLEENPLNRVVLVGGSWRELQDRWKVKIYYDQHGKLTQHF 188

Query: 181 GIDQVPARVSAVPGDRFLKVEF 202
           GI +VPA +S   G +    E 
Sbjct: 189 GIKRVPAVLSQ-DGMKIRVDEV 209


>UniRef50_A4SUD5 TraW protein n=6 Tax=Gammaproteobacteria RepID=A4SUD5_AERS4
          Length = 209

 Score =  224 bits (572), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 1/207 (0%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           MR   +   L  G    AA+LGTWGDL+P+ EPDMLT I  RL A+++SGE+  + +AFK
Sbjct: 1   MRAACVYIALALGGQAHAANLGTWGDLYPITEPDMLTTIHDRLQAMQESGELAEQQEAFK 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +RVI+NSLRP  V G+    +  +   DP+  +  D+ D+EGRVFAR+G+ +NPL  VPF
Sbjct: 61  QRVIKNSLRPAPVRGLKLATQNSTHFIDPTFVVGQDLADHEGRVFARKGDKVNPLDSVPF 120

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRL 180
            QTL+FI+ DD  Q+AWM+ Q P T   K+ILV G I +  + LD+R+YFDQ GVL Q+ 
Sbjct: 121 LQTLFFIDADDDRQIAWMRNQRPATPIYKVILVNGDIRKATEQLDTRIYFDQEGVLSQKF 180

Query: 181 GID-QVPARVSAVPGDRFLKVEFIPAE 206
            +     A  +A  G R     +   +
Sbjct: 181 ALTAVPAAVHAAPNGKRLQIDTYALEQ 207


>UniRef50_Q3IUW0 TraW n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IUW0_RHOS4
          Length = 212

 Score =  217 bits (552), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 72/211 (34%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 2   RCRGLIALLIWGQSVAA---ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           R R L AL +   +  A    D G +G L+P+ EPD+L  I+ RL  +E SGE+     A
Sbjct: 4   RARILTALAVVACTAGAAAGKDFGVYGKLFPIAEPDLLEQILGRLRTMEASGELAEMERA 63

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
            +ER      RP     +   E+Y +  FDPS+ L  D+ D++GRVFAR G V+NPL Y 
Sbjct: 64  MQERTRAYVERPDTGSELPPAEEYRAFEFDPSITLNQDLADHQGRVFARAGTVVNPLAYS 123

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
            F + +  I+GD   QV +   +    L++ I++ +GS   + ++   R +FDQ+ V+  
Sbjct: 124 AFAKRIVVIDGDAEDQVRFALAEG-DELDTLIVIAKGSPLALGRAHGRRFWFDQDAVMVS 182

Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           R G++++P+ +     D  L +E IP  E +
Sbjct: 183 RFGLERLPSVIKRA--DPILLIEEIPTGEAQ 211


>UniRef50_A8QYQ5 TraW protein n=2 Tax=Legionellaceae RepID=A8QYQ5_9GAMM
          Length = 211

 Score =  216 bits (550), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 71/205 (34%), Positives = 104/205 (50%), Gaps = 3/205 (1%)

Query: 5   GLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVI 64
            LI L+I    + A   G  G+++PV E   L +I +RLTAL  SG +      + +   
Sbjct: 6   CLILLMISMGQIHAKSFGVIGEVFPVAEKSFLKIIEERLTALNDSGALEAMNQRWIQTAA 65

Query: 65  RNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTL 124
            ++ RP A+  + RT    +  + P + L+ DIRD  GRV   +G  +N L  +P  Q  
Sbjct: 66  EHANRPSAL-NLPRTNHSITHHYVPEITLSQDIRDERGRVLYVRGTHVNALSQLPSYQPC 124

Query: 125 -YFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183
             F N DD AQ+ W + Q       K+IL  G+I   +K L S +YFDQ G + ++L I 
Sbjct: 125 WLFFNADDEAQINWAQLQKTSCPNPKLILTGGAINAAEKKLHSVIYFDQAGKITRQLRIT 184

Query: 184 QVPARVSAVPGDRFLKVEFIPAEEG 208
            VPA V+   G+R + VE    E G
Sbjct: 185 HVPAIVTR-KGNRLVIVEHAIKENG 208


>UniRef50_A1W649 Membrane lipoprotein lipid attachment site n=5
           Tax=Betaproteobacteria RepID=A1W649_ACISJ
          Length = 212

 Score =  214 bits (546), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 65/191 (34%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 13  GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72
                A DLG  G  + + EP +L +I QRL   E+SGE+ R     + R       P  
Sbjct: 19  STPAGATDLGALGPTYDIAEPHLLQMIEQRLREKERSGELARIEQDARARGTEAIRSPAP 78

Query: 73  VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDP 132
           V G+  T K  +  FDP+  L  +I   +G +    G   NPL  V  ++ L F +  D 
Sbjct: 79  VAGVQTTAKSRTFYFDPTYTLDRNILGAQGELLFAAGTKANPLDVVSLSRHLLFFDARDS 138

Query: 133 AQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSA 191
            QV   +        + K IL  GS  ++ KS    VY+DQ G+L +RLGI QVPA VS 
Sbjct: 139 RQVRQARELMARYQGKVKPILTGGSYLDLMKSWRIPVYYDQQGLLTRRLGISQVPALVSQ 198

Query: 192 VPGDRFLKVEF 202
             G R    E 
Sbjct: 199 -EGKRLRIDEM 208


>UniRef50_Q2NDH5 TraW n=5 Tax=Sphingomonadales RepID=Q2NDH5_ERYLH
          Length = 210

 Score =  214 bits (546), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 75/192 (39%), Positives = 100/192 (52%), Gaps = 4/192 (2%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            D G  G ++PV E D+L  I  RL  +E+SGE  +     K R I    RP  V G+ R
Sbjct: 22  RDYGQRGAVFPVIERDLLEQIHTRLAQMEKSGETAKLNQELKRRTIARVNRPDPVAGLIR 81

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             +  S  FDP++ LAADIR+ +G +    G  +NPL  V     L F++GDDPAQ+AW 
Sbjct: 82  AHESRSWPFDPTITLAADIREAKGELIHAAGTRVNPLDSVALRVPLLFLDGDDPAQIAWA 141

Query: 139 KRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPGDRFL 198
            RQ      +K+ILV+G+  E+ K+   R YFDQ G L ++ GI  VPARV    G    
Sbjct: 142 LRQ---DPNAKLILVKGAPLELMKARQRRFYFDQGGNLTEKFGIRAVPARVRQ-NGRVLE 197

Query: 199 KVEFIPAEEGRK 210
             E        K
Sbjct: 198 VSEIALPPRKAK 209


>UniRef50_A5KZG1 Sex pilus assembly and synthesis protein TraW n=1 Tax=Vibrionales
           bacterium SWAT-3 RepID=A5KZG1_9GAMM
          Length = 241

 Score =  213 bits (543), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 65/206 (31%), Positives = 97/206 (47%), Gaps = 13/206 (6%)

Query: 7   IALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRN 66
           + LL    +      G  G+L+P+ E DML  I  RLT LE +GE  +    F E V  +
Sbjct: 20  VTLLTIAPTALGQQFGRQGELFPIAEVDMLQWINSRLTHLEATGETAKMQQQFVESVENS 79

Query: 67  SLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY--------- 117
             RPP V G+  T    +   DPS++LA DI+D +G +   +G V+NP            
Sbjct: 80  VRRPPPVEGLTTTTAPNTFYIDPSLKLATDIKDAQGHLLYAKGLVINPFDTDTWPIDIPK 139

Query: 118 --VPFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175
               ++  + F +GDDP Q AW K+        K  L  GS  E+    D+R+YFDQ G 
Sbjct: 140 KSFDYSHVIVFFDGDDPRQRAWAKQYRADKP-IKWTLTNGSPEEVATEFDARIYFDQQGH 198

Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVE 201
             ++  +  +P+ +    G R+   E
Sbjct: 199 YSRQFQLSHIPSLIEQ-DGARWKITE 223


>UniRef50_C5SIL1 Type-F conjugative transfer system protein TraW n=1
           Tax=Asticcacaulis excentricus CB 48 RepID=C5SIL1_9CAUL
          Length = 210

 Score =  211 bits (538), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 72/207 (34%), Positives = 106/207 (51%), Gaps = 5/207 (2%)

Query: 1   MRCRGLIALLIWGQ-SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59
           +R    IA+ I       A DLG +G  + + E D+L  I+ +L   E+ G +      F
Sbjct: 4   VRASLFIAMTICACLPAQAGDLGAYGPTFEIIETDLLKDILSKLRKAEKDGRIDELNRKF 63

Query: 60  KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119
            +   +    PP VPGI  T K  + L+DPS+ +  +I D++GRVFAR+GE +NPL+ +P
Sbjct: 64  ADATRKRVESPPPVPGIVTTVKTRTWLYDPSIVVPQEIADDKGRVFARRGERINPLERLP 123

Query: 120 -FNQTLYFINGDDPAQVAWMKRQTPPTLESKII--LVQGSIPEMQKSLDSRVYFDQNGVL 176
            +N+ L FI+G D  QV +   Q+    + + I  LV GS     ++     YFDQ G L
Sbjct: 124 SYNKVLIFIDGRDARQVEFAVAQSKKLGQDRTIMVLVNGSPMATMRARKQAFYFDQLGTL 183

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFI 203
             + GI QVPA V+   G      E  
Sbjct: 184 TTKFGITQVPATVT-KEGTALRVREVA 209


>UniRef50_A6WUR1 Type-F conjugative transfer system protein TraW n=6
           Tax=Gammaproteobacteria RepID=A6WUR1_SHEB8
          Length = 234

 Score =  210 bits (535), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 67/205 (32%), Positives = 95/205 (46%), Gaps = 18/205 (8%)

Query: 18  AADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIG 77
           AA +GT G ++P+ E DML  I  RL  LE++GE+    + F+E V     RP  V G+ 
Sbjct: 19  AASIGTVGQVFPIAEIDMLQWIENRLQTLEKTGELDSMREQFQENVKAGVKRPRPV-GLI 77

Query: 78  RTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN-------------QTL 124
            T+     L DP++ LA DI D  G +   +G  +NP     +              +TL
Sbjct: 78  TTKTPEVFLVDPTLTLAKDINDANGNLIYPKGTRVNPFDTKTWPALQKANVGKFEFSKTL 137

Query: 125 YFINGDDPAQVAWMKRQTPPTLES---KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
            F +GDD  QV W K       +    K IL  G    +   LD+RVYFDQ G L + L 
Sbjct: 138 VFFDGDDVQQVLWAKEFATTHDKPHTIKWILTGGEPETLHVQLDARVYFDQQGNLSRALT 197

Query: 182 IDQVPARVSAVPGDRFLKVEFIPAE 206
           + +VP+ V    G  +   E   + 
Sbjct: 198 LKRVPSVVKQ-EGVMWQVREMDVSN 221


>UniRef50_D1RMN6 Type-F conjugative transfer system protein TraW n=2 Tax=Legionella
           RepID=D1RMN6_LEGLO
          Length = 208

 Score =  209 bits (533), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 4/197 (2%)

Query: 14  QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73
             V A +LG +G L+PV E D+  VIM +L  LEQSG + +       RV  +  RP  +
Sbjct: 16  TPVYAKNLGNYGQLFPVVEKDIREVIMAKLHRLEQSGALKQHQQKIVARVEDHLRRPKPL 75

Query: 74  PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133
             +  T    +   DPS+ +   +  ++G + A++G  +NP + V F++TL+F + DD  
Sbjct: 76  -HLPTTTTPKTHELDPSIVVNQTLYAHDGTLIAKKGAHLNPFERVSFSKTLFFFDADDRK 134

Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
           Q+AW+K       + K IL  G +    + L S VYFD  G L +   +  VP+ VS   
Sbjct: 135 QLAWVKTHYTHFDQVKFILTGGDVKAASEVLGS-VYFDLEGRLSRYFHLKHVPSVVSQ-E 192

Query: 194 GDRFLKVEFIPAEEGRK 210
           G  +   E I   E RK
Sbjct: 193 GLVWRIQE-IGQHELRK 208


>UniRef50_Q1RJF2 Conjugative transfer protein TraW n=8 Tax=Rickettsia
           RepID=Q1RJF2_RICBR
          Length = 254

 Score =  207 bits (526), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 6/188 (3%)

Query: 14  QSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAV 73
             +   D    G ++P+ E  +L VIM +L   +Q+G + +  + FK +V +   RP  V
Sbjct: 69  SKIEIRDYEVQGHVFPIIEESLLEVIMAKLQIAKQNGVLEKMQEEFKNKVQQKISRPTPV 128

Query: 74  PGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPA 133
             + +     +  +DPS     D++D  G +  + G  +NPL+ + + + L FI+GDD  
Sbjct: 129 LALAKASINRNWHYDPSFIQKTDVKDQAGNIIVKVGTNVNPLEKISWGKALIFIDGDDEQ 188

Query: 134 QVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
           QV W K +       K++L  G+  ++ + L+  V+FDQ GVL  R  I  VPA      
Sbjct: 189 QVKWAKSKI-----GKLVLTSGNPIKLAQKLNKPVFFDQGGVLTTRFKIKAVPAIARQ-E 242

Query: 194 GDRFLKVE 201
           G      E
Sbjct: 243 GKLLKISE 250


>UniRef50_Q6MB93 Putative F pilus assembly protein traW n=1 Tax=Candidatus
           Protochlamydia amoebophila UWE25 RepID=Q6MB93_PARUW
          Length = 210

 Score =  207 bits (526), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 6/206 (2%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             G++ +L+   S+ A +LG +G    ++E D+L + MQ+   L    +  + M   +  
Sbjct: 5   LTGILTVLLIFSSLEAKNLGIYGATASIEEEDLL-IFMQKNMQLITEADHEKWMQNLQSH 63

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           ++    +P  + GIG+T+ Y    FDPS+ +  DI ++  ++  ++G  +NPL  V  +Q
Sbjct: 64  LLAQMKKPFVIKGIGKTQTYTVSYFDPSITVDRDILNHSQQIVVKKGTRINPLSLVMLDQ 123

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
            L F++  D  Q+AW +   P     K ILV+G   ++++ L   +YFDQ GVL ++ GI
Sbjct: 124 DLLFVDATDTEQLAWAQALYPS---GKWILVKGQPMQLEEELQRPIYFDQGGVLLKKFGI 180

Query: 183 DQVPARVSAVPGDRFLKVEFIPAEEG 208
             VPARVS   G R    E IP  E 
Sbjct: 181 QSVPARVSQ-EGLRLKI-ELIPIGES 204


>UniRef50_B4RLR5 TraW n=8 Tax=Neisseria gonorrhoeae RepID=B4RLR5_NEIG2
          Length = 218

 Score =  205 bits (523), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 2/203 (0%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
             G+ + +              G  +P+ E   +  I  RL A + SG++       ++R
Sbjct: 17  ATGISSWVAASTPSVEKVGDKIGTTYPIAEKHAIREIEARLKAKQDSGQLAAMQKEVQDR 76

Query: 63  VIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQ 122
           + R++L    + G+ +  K   R FDPS  L   I D +G++ A  G V+ PL+  P   
Sbjct: 77  INRSALNLQPLEGLAKATKGSVRYFDPSYTLTETIYDQDGQIIAPAGTVVKPLEAAPIPF 136

Query: 123 TLYFINGDDPAQVAWMKRQTPPTLES-KIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLG 181
            ++F +G +P Q+   K+      ES   IL  G+  E+   +D  VY+DQ G + +   
Sbjct: 137 KMFFFDGREPDQIELAKKLAAEYGESFMPILTAGNWYELSVEMDQAVYYDQEGRMSKSFQ 196

Query: 182 IDQVPARVSAVPGDRFLKVEFIP 204
           +++VP+ VS   G R       P
Sbjct: 197 LNEVPSLVSQ-EGGRLRVEVMKP 218


>UniRef50_A5CD93 Conjugative transfer protein n=7 Tax=Rickettsieae
           RepID=A5CD93_ORITB
          Length = 219

 Score =  204 bits (520), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 6/189 (3%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
            V   D GT G ++P+ E  +L VIM +L A  +SG + +    F+E++ +  +RP  V 
Sbjct: 35  GVEIKDYGTRGHVFPIIEESLLEVIMAKLNAASKSGLLNQMQLEFQEKIRQKIMRPVPVK 94

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
            + +  +  +R++D +     DI+   G +  R+G  +NPL+ + + + L  I+GDD  Q
Sbjct: 95  NLSKATENKTRIYDSTYVQKDDIKTKNGIIIVRRGTKINPLEMINWGEPLILIDGDDEDQ 154

Query: 135 VAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVPG 194
           VAW+K +       KI+LV G+  E+   L   ++FDQ G+L ++  I  VPA +     
Sbjct: 155 VAWVKSRP-----GKIVLVNGNPIELSNLLGRHIFFDQFGMLIRKFKIQAVPAIIEQ-EN 208

Query: 195 DRFLKVEFI 203
           +     E  
Sbjct: 209 NVLKISEVS 217


>UniRef50_D0Z4T1 Sex pilus assembly and synthesis protein TraW n=2
           Tax=Photobacterium damselae subsp. damselae CIP 102761
           RepID=D0Z4T1_LISDA
          Length = 256

 Score =  199 bits (507), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 103/212 (48%), Gaps = 18/212 (8%)

Query: 13  GQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPA 72
                A +LGT    +P+ E DML  IM RL   E +GE+ +  D F ERV ++++RP  
Sbjct: 18  FSPAYAKNLGTIAQTFPIAEIDMLDWIMARLRHFEATGELEKMQDEFTERVKQSAIRPTP 77

Query: 73  VPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--------- 123
           V G+  T    +   DP++ LA DI+D  G+V   +G  +NP     +            
Sbjct: 78  VEGLTTTSTPTTYSIDPTLTLAEDIKDANGKVLFHKGLKINPFDSSTWPNAKGLPPLYLS 137

Query: 124 --LYFINGDDPAQVAWMK------RQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV 175
             L F++GDD  Q+ + K      +     L+ K ILV+G   ++Q  L  +VYFDQ G 
Sbjct: 138 KILVFLDGDDMRQLRFAKALQQQEQAKAHPLKFKWILVKGEPAKVQHFLKEKVYFDQLGN 197

Query: 176 LCQRLGIDQVPARVSAVPGDRFLKVEFIPAEE 207
           + +R  I  + +  +   G R+   EF  ++E
Sbjct: 198 ITKRFDIKHI-STTAKQAGTRWEVKEFDVSQE 228


>UniRef50_Q1MY36 TraW n=1 Tax=Bermanella marisrubri RepID=Q1MY36_9GAMM
          Length = 205

 Score =  199 bits (507), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 61/204 (29%), Positives = 97/204 (47%), Gaps = 4/204 (1%)

Query: 1   MRCRGLIALLIWGQSVAAA--DLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           M+    + L ++   V     +LG  G  +PV E   L  I+     L ++G      + 
Sbjct: 1   MKVILSVLLAVFTSFVLGDELNLGALGKSYPVIERSPLDEILNNAKNLVENGGWKEIQEK 60

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
            KE V     RPP +  +  T++Y  R +D +  +  DI   EG + A+ G+ +NPL + 
Sbjct: 61  KKEAVKSFLERPPGIK-LPTTDEYRRREWDATYIVKNDIYTAEGVLIAKSGQKINPLDFK 119

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
              +   F N DD  Q AW+++     ++SK I V GS+ +  +S   RV+FDQ G L  
Sbjct: 120 RMTKQYCFFNMDDKMQRAWIEQNCANPIKSKAIGVFGSVKDFAESTKLRVFFDQYGKLVD 179

Query: 179 RLGIDQVPARVSAVPGDRFLKVEF 202
           R  I  VPA V  + G++    E+
Sbjct: 180 RFDIRHVPAIVRQI-GNKIYVEEY 202


>UniRef50_C4Z004 Type-F conjugative transfer system protein TraW n=2 Tax=Rickettsia
           endosymbiont of Ixodes scapularis RepID=C4Z004_9RICK
          Length = 213

 Score =  195 bits (496), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 19/215 (8%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+    + +L+   SV   D G  G  + V E   +++I  RL+ L+    + +  +  +
Sbjct: 1   MKLILGLVILVLSSSVLGIDFGKRGATYKVAEEGFVSMIKNRLSTLD----LQQHQEEMR 56

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
               +  L P  V GI  T +     +DPS  L  DI+  +G++  + G  +NPL ++ F
Sbjct: 57  RIAKQQILEPAPVLGIRATSESREFWYDPSFTLTEDIKLPDGKILHKAGTKVNPLDHMVF 116

Query: 121 NQTLYFINGDDPAQVAWMKRQTPPT--------------LESKIILVQGSIPEMQKSLDS 166
           ++ L FI+G    QV W+K +   T               E +IILV G I E+Q+ +  
Sbjct: 117 DRELIFIDGRSQKQVEWLKARLEDTQANSKKKTNEEVNNFEMRIILVGGKILELQEDIGR 176

Query: 167 RVYFDQNGVLCQRLGIDQVPARVSAVPGDRFLKVE 201
            +YFDQ G L  + GI+QVPA V    G +    E
Sbjct: 177 TLYFDQGGELTNKFGIEQVPAIVVQ-DGKKLKISE 210


>UniRef50_A0R7Q5 Conserved hypothetical cytosolic protein n=1 Tax=Pelobacter
           propionicus DSM 2379 RepID=A0R7Q5_PELPD
          Length = 200

 Score =  193 bits (492), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 12/210 (5%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M+     A++I     A       G  + + E D L  + +R+   +    +        
Sbjct: 1   MKHLLFAAIIIAHTCNAIGSEIVTGMTYQISERDALEELEERVQKADWKKHI-------- 52

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           + +  N  RP  +  + R       L D S  + +DI +N+G +   +G   NPL ++ F
Sbjct: 53  QSIKPNKYRPSNLIELPRARGASKFLVDMSYTVESDILNNKGELLYPKGYTFNPLDFISF 112

Query: 121 NQTLYFINGDDPAQVAWMKRQT-PPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
            +TL  INGDDP QV W K  +    +   + L QG      K L   VY+     L  R
Sbjct: 113 EKTLVVINGDDPKQVRWFKSSSLKNKINVSLFLTQGDAISTSKDLARPVYYATKP-LVAR 171

Query: 180 LGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
             +  VP+ V A    R ++VE I    G+
Sbjct: 172 FQLRSVPSVVKA--SGRCMEVEEIFINGGK 199


>UniRef50_A1AKL5 Conserved hypothetical cytosolic protein n=2 Tax=Desulfuromonadales
           RepID=A1AKL5_PELPD
          Length = 218

 Score =  189 bits (481), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 11/208 (5%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
              I LL+   S  A +LG +G  + + E D L  I +R   ++    + +       R 
Sbjct: 7   LAAIVLLVGVSSAHAKELGVFGMTYRIVERDALVEIEERAKQVDWHKVLDK-------RK 59

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
           + N   PP    + R ++  S   D +     D+ D +G +   +G   NPL YV + +T
Sbjct: 60  VENFQGPPDRVRLPRAKRNRSFQVDMTYTAEIDVPDGKGGILYPKGYTFNPLDYVTYPKT 119

Query: 124 LYFINGDDPAQVAW-MKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGI 182
           L  I+G DP QV W    +    L+  ++L +G +  + K +   + F  +  + +RL +
Sbjct: 120 LVVIDGTDPEQVMWFATSECDKRLDVTLLLSEGRLGAVSKRISRPL-FYADRKIIERLKL 178

Query: 183 DQVPARVSAVPGDRFLKVEF-IPAEEGR 209
             VP+ V    G      E  +PA   +
Sbjct: 179 KAVPSVVRQ-KGRVMEVTEVKLPAGHAK 205


>UniRef50_Q2LTZ6 Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus SB
           RepID=Q2LTZ6_SYNAS
          Length = 277

 Score =  184 bits (467), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 7/197 (3%)

Query: 15  SVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVP 74
           +   ADLG  G  +PV E D L+ I +R  A++     G+  D  + R    + RP  + 
Sbjct: 84  AAVCADLGNIGATYPVVERDALSEIEERAKAVDW----GKAFDPKRTRERIQNYRPEGME 139

Query: 75  GIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQ 134
            +   +K      D S  L  DI D  G +   +G   NPL +V     L  I+G +  Q
Sbjct: 140 ALPAAKKDRVFQVDVSYTLDFDIPDGRGGILYLRGFSFNPLAHVFLPNILVVIDGGNERQ 199

Query: 135 VAWMKRQTPPTLESKIILVQGSIPE-MQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAVP 193
           + W K  +       ++L+ G     + + L     F  +  + +R  +  VPA +    
Sbjct: 200 IEWFKASSYAKDHRVMLLLCGGPYTRVMEKLKRPA-FYADARIVKRFQLKAVPAVIVQ-K 257

Query: 194 GDRFLKVEFIPAEEGRK 210
           G      E+   ++G+K
Sbjct: 258 GTVMEVREYALDDKGQK 274


>UniRef50_C9NPU3 Putative uncharacterized protein n=1 Tax=Vibrio coralliilyticus
           ATCC BAA-450 RepID=C9NPU3_9VIBR
          Length = 213

 Score =  182 bits (463), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 55/213 (25%), Positives = 90/213 (42%), Gaps = 21/213 (9%)

Query: 1   MRCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFK 60
           M    ++ L+    S+ AA+    G  + + E D+   I QRL  LE  G + +     +
Sbjct: 1   MSRWCVLVLVGAVCSLTAAEPKRLGATFSIGEVDLWEWIGQRLRVLEHDGTLAKWQQTQR 60

Query: 61  ERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
           +R+     +P  V  +  T+   + L DPSVRL A     +G+     G  +NP     +
Sbjct: 61  DRIRDQFEQPMPVS-LSATQSPTTFLVDPSVRLPATY---DGQ---PPGRWVNPFDASTW 113

Query: 121 -----------NQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVY 169
                       + L F +G D  Q  W  + T        IL  G    + ++L++ VY
Sbjct: 114 PSPPLGMTYHYPRALVFFDGRDRKQRRWATQFTADRP-ITWILTGGRPQTLARTLNAPVY 172

Query: 170 FDQNGVLCQRLGIDQVPARVSAVPGDRFLKVEF 202
           FDQ G L ++L +  VP+ V      R+ +V  
Sbjct: 173 FDQGGYLSRKLRLRSVPSVVVQA--HRYWEVTE 203


>UniRef50_C5F048 Putative uncharacterized protein n=2 Tax=Helicobacter pullorum MIT
           98-5489 RepID=C5F048_9HELI
          Length = 219

 Score =  171 bits (434), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 88/206 (42%), Gaps = 8/206 (3%)

Query: 1   MRCRGLIALLIWGQSVAAAD-LGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAF 59
           M+   LI  L         D +   G  +  KE D+L +I + LT      E+ +K+   
Sbjct: 1   MKKLFLILSLSASLFAKETDNILNLGKTYEFKERDILELIQEHLTK--NRPELEQKLLGQ 58

Query: 60  KERVIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQY 117
           ++++  N    RP  +  +    K  +   D +  L  DI+D+EG +   QG   NP +Y
Sbjct: 59  RDKLKENIKNWRPKDMVKLTPAPKNNTFSPDMTWTLTKDIKDHEGNIIYPQGFSFNPAKY 118

Query: 118 VPFNQTLYFINGDDPAQVAWMKR-QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVL 176
              +  +  IN +D  ++ W+++     T+  +I L +GS  EM +      Y+     +
Sbjct: 119 ARLSYGIVVINANDKEELEWLEKGGYLNTIAYRIFLSEGSYYEMIQKHKQDFYYLL-PEI 177

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEF 202
            +R  +   P+ +    G+  +  E 
Sbjct: 178 AKRFQLKHTPSIIKQ-EGEEIIIQEV 202


>UniRef50_Q4HP76 Plasmid transfer protein, TraW n=2 Tax=Campylobacter
           RepID=Q4HP76_CAMUP
          Length = 248

 Score =  170 bits (432), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 88/202 (43%), Gaps = 10/202 (4%)

Query: 3   CRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKER 62
              +++ LI+  +     L   G++ P  E DM+ +I + +  ++   E+  + +  +E+
Sbjct: 6   ASFILSTLIYAGNTKELSL---GEVKPFAERDMIELIQEHM--VKNKDEIEARANKLREQ 60

Query: 63  VIRNS--LRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPF 120
              N    +P  +  +    +      D +  L  DI+D  G+V  ++G   NP  YV  
Sbjct: 61  AKENVIQYKPKGLTPLTPALEDRVFYPDLTYTLNEDIKDINGKVLYKKGFSFNPANYVKI 120

Query: 121 NQTLYFINGDDPAQVAWMKRQ-TPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQR 179
           +  L  I+G +  +V W K+      L  K++L  GS  E+ K L   V F     +  +
Sbjct: 121 SYALVVIDGTNRKEVEWFKQSGFANKLTHKLLLSNGSFYELNKELKQEV-FYLMPQIKDK 179

Query: 180 LGIDQVPARVSAVPGDRFLKVE 201
             I++ P+ ++    ++    E
Sbjct: 180 FKIEKTPSIITQ-ESNKIKVSE 200


>UniRef50_A9AU20 Putative type IV secretion system protein n=1 Tax=Burkholderia
           multivorans ATCC 17616 RepID=A9AU20_BURM1
          Length = 222

 Score =  168 bits (427), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 55/214 (25%), Positives = 90/214 (42%), Gaps = 19/214 (8%)

Query: 2   RCRGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKE 61
           +    +A  +      A DLGT    +P+ + D    I       +QSGE+      +++
Sbjct: 6   KLLIGLAASLQLSISYAEDLGTKAQTYPL-DRDAAEQIKDIFRRKQQSGELDAFWKNYRD 64

Query: 62  RVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFN 121
           R I +   P    GI  +    + L +   ++  D RD+ G+V  R+G V+ PL+ +P  
Sbjct: 65  RTIESIKNP-PSLGIATSYGVRTELRELRFQIPQDYRDHTGKVIVRRGTVVEPLKVMPLT 123

Query: 122 QTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL---------DSRVYFDQ 172
             L FI+G D  QV +  R++  +   KI+L  GS   ++                YFDQ
Sbjct: 124 NGLLFIDGTDARQVEYAIRRS-QSERLKIVLTAGSPYALRVKYAKVPWHGGTGVPFYFDQ 182

Query: 173 NGVLCQRL------GIDQVPARVSAVPGDRFLKV 200
             ++   L       I+ VPA +    GDR    
Sbjct: 183 RRMIISTLSKLYNIQINSVPAAIFQ-QGDRLAVQ 215


>UniRef50_C1SHD8 Putative uncharacterized protein n=1 Tax=Denitrovibrio acetiphilus
           DSM 12809 RepID=C1SHD8_9BACT
          Length = 216

 Score =  166 bits (421), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 91/211 (43%), Gaps = 12/211 (5%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
           R    ++ +   + A DLGT+G  + + E D++T I +R +  +      RK +A K+R+
Sbjct: 2   RVFFIMIAFVVPLFAKDLGTFGTTYGIAEKDIITEIEKRASETDWQ----RKFEAEKDRL 57

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIR--DNEGR---VFARQGEVMNPLQYV 118
            + +    A   +   +K  S   D +  L  DI   D  G+   V   +G   NPL Y 
Sbjct: 58  RKEA--GMASMSLPPADKDRSYYVDMTYTLDKDIPKVDTTGKIIGVLYSKGFTYNPLDYA 115

Query: 119 PFNQTLYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQ 178
              +T   +NG   A++ W  +       +  ++ +G   E+ + L   V F  +    +
Sbjct: 116 DITETYVILNGKREAELQWFSKYYKDDYRAYPLITEGDAFEVAEKLGRGV-FKLDSQFRE 174

Query: 179 RLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
           R  I+   + +      + ++V+ I  ++ +
Sbjct: 175 RFSIENTVSVIYEDFSRKMMRVDVIKVKDEK 205


>UniRef50_Q3C0M0 TraW protein n=1 Tax=Sodalis glossinidius RepID=Q3C0M0_SODGL
          Length = 237

 Score =  166 bits (421), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 76/130 (58%), Positives = 92/130 (70%)

Query: 17  AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76
            A D G  G+++PV EPDML  + QR  +L  SG   ++MDAF +RV RNS RP  V GI
Sbjct: 1   MAKDFGRLGEVYPVAEPDMLDTLTQRAKSLVDSGAWAQEMDAFTQRVERNSQRPAPVEGI 60

Query: 77  GRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA 136
           G++  Y  R FDPSV L  D++D +GRVFARQGEV+NPL  VPF QTLYFI+GDD  QVA
Sbjct: 61  GKSIHYSERFFDPSVVLLRDLQDMDGRVFARQGEVINPLATVPFAQTLYFIDGDDADQVA 120

Query: 137 WMKRQTPPTL 146
           WM+RQ P TL
Sbjct: 121 WMQRQRPQTL 130


>UniRef50_B7XGR9 Putative pilus assembly protein n=2 Tax=Pseudomonas
           RepID=B7XGR9_PSEPU
          Length = 412

 Score =  165 bits (418), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 21/195 (10%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLGT G    + EPD++ V  QR+  L+      R +  F +    +         +  
Sbjct: 217 GDLGTIGSTQEIIEPDLMEVAKQRIAELDTDAMKKRAIARFWDNHKGH--------PLPP 268

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             +  +RL DPSV +  DI D++GRV  + G  +NPL  +PF+Q L  I+   P QVA  
Sbjct: 269 VTESATRLVDPSVIVPDDILDSQGRVVQKAG-RINPLDMMPFDQKLVVIDPTQPWQVALA 327

Query: 139 KRQTPPTLESKIILVQGS----------IPEMQKSLDSRVYFDQNGVLCQRLGIDQVPAR 188
           KR+     E+  + V  +             +Q SLD+ +Y      + +R  I + P+ 
Sbjct: 328 KREYADHGENLTVTVMATQIPTSSGWDLFNSVQDSLDAPLYL-LPPDMAERFQILRAPSV 386

Query: 189 VSAVPGDRFLKVEFI 203
           V+A   + F+  E  
Sbjct: 387 VTA-DTENFIVREVA 400


>UniRef50_B0RKU6 TraU family protein n=2 Tax=Yersinia RepID=B0RKU6_YEREN
          Length = 527

 Score =  163 bits (413), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 83/203 (40%), Gaps = 18/203 (8%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
              +A+L+   S   A     G L+ + EPD L  I +R+  ++   E+ +      +R 
Sbjct: 9   AFFVAMLL--SSHVEASQNVIGQLYSISEPDALEQIQERVANVDWQKELNK------DRE 60

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
              + +      +  T++  +R   P      +++D +GR+   +G   NPL +V   Q 
Sbjct: 61  KWGAFKGVP---LPTTQEDKTRKVIPFYSAPFEVKDKDGRLLFPKGYTFNPLVHVRLPQR 117

Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183
           L  +   +  Q  W+K     +    II   G + E+ + +     F  +  L QRL I 
Sbjct: 118 LIIV---EKGQEDWLKSIATESD--MIIYASGDVIEVSQRIGRNA-FILDKNLQQRLDIK 171

Query: 184 QVPARVSAVPGDRFLKVEFIPAE 206
            VP+ +    G+  +  EF    
Sbjct: 172 VVPSIIQQ-EGEHLIIQEFSKQH 193


>UniRef50_Q8L272 Pilus biogenesis protein n=1 Tax=Proteus vulgaris
           RepID=Q8L272_PROVU
          Length = 416

 Score =  157 bits (398), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 23/203 (11%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G    + E  +L +I Q++  L+        +D + ++                
Sbjct: 226 GDLGVAGPTKDISEISLLDIIEQKIKTLDFDKMKTDALDNYWKKQEF--------TDFPP 277

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             K+  +  +PSV +  DI   +G+V A+QG  +NPL  +PF   L F +     Q    
Sbjct: 278 ALKHNQKFINPSVVIPQDILAPDGQVVAKQG-RINPLDVIPFRLKLIFFDARIDWQRKIA 336

Query: 139 KRQTPP-TLESKIILVQGS-----IPEMQKSL-----DSRVYFDQNGVLCQRLGIDQVPA 187
           +R+        + IL+  +         Q +       SR+Y  Q G +  R GI  VP+
Sbjct: 337 RREYQNAEPGIEPILITTNVYGDGWKTFQDAHEMYGEKSRLYMIQPG-MADRFGITSVPS 395

Query: 188 RVSAVPGDRFLKVEFIPAEEGRK 210
            V+A   D+   +   P +E  K
Sbjct: 396 IVTAT--DKQYVINEYPEDEANK 416


>UniRef50_C6YK86 Sex pilus assembly protein n=14 Tax=Gammaproteobacteria
           RepID=C6YK86_VIBCH
          Length = 406

 Score =  151 bits (381), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 22/201 (10%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
             LG  G +  + EPD++ V MQRL +L+      + ++ F  R             + +
Sbjct: 211 GSLGQRGPIHSILEPDLMQVAMQRLQSLDLGALKKKAIERFWSRQTF--------TDLPK 262

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVA-- 136
             +Y  R  DP++ +   + D  GR     G  +NPL+ +PF Q L   N  +  +V   
Sbjct: 263 ATQYRIRTVDPTIVMQLPLLDANGRTLIPAGTRINPLKALPFTQQLVVFNASNAEEVDAV 322

Query: 137 --WMKRQTPPTLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPA 187
             W++ Q        +I  Q        S+  ++K+LDS VY   N  L QR  +   P+
Sbjct: 323 AHWLETQDRTLRRITLITTQLDRAQGWNSLNALEKTLDSPVYL-LNASLKQRFDLQVTPS 381

Query: 188 RVSAVPGDRFLKVEFIPAEEG 208
            V    G  F ++E IPA+E 
Sbjct: 382 FV-QAKGLAF-EIEEIPAKEL 400


>UniRef50_C1MEJ2 Pilus biogenesis protein n=1 Tax=Citrobacter sp. 30_2
           RepID=C1MEJ2_9ENTR
          Length = 437

 Score =  148 bits (375), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 22/196 (11%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G    V E +++  + + +  L+  G   + +D +  R +              
Sbjct: 245 GDLGVAGPAVGVVEKNLIDELQESVAKLDFDGMKKKAIDNYWPRQVFQ--------EFPE 296

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWM 138
             K  +R  DP+V +  +I    G + A++G   NPL  +PF   L F +  +  Q  + 
Sbjct: 297 ATKRTTRTIDPTVIIPQNITSPNGDIVAKRG-RFNPLTVMPFTIKLIFFDAREEWQRQFA 355

Query: 139 KRQTPPTLES-KIILVQGSIP--------EMQKSLD--SRVYFDQNGVLCQRLGIDQVPA 187
           + Q   T  S   ILV  ++         + +K     +R+Y  Q G + +R G+  VP+
Sbjct: 356 RYQFEHTPASLTPILVTTNVYGDGWQTFRDTKKEYGDFARLYMIQPG-MAERYGLINVPS 414

Query: 188 RVSAVPGDRFLKVEFI 203
            V+A    RF+  E+ 
Sbjct: 415 IVTA-DSKRFINDEYS 429


>UniRef50_C4NVV1 TraW n=9 Tax=Gammaproteobacteria RepID=C4NVV1_ECOLX
          Length = 421

 Score =  148 bits (374), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 32/212 (15%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLG  G +  + EPD++ V  +RL  ++   +  + ++ F  +   N         + R
Sbjct: 220 GDLGVKGPVEKISEPDLIDVAKKRLANIDWEEKKKQAIERFWTKQNFN--------ELPR 271

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPL---------QYVPFNQTLYFING 129
             K  +R  DPSV + +DI   +G VFA  G+V+NPL            PF Q +   + 
Sbjct: 272 APKSRTREIDPSVMITSDISTPDGTVFAHAGDVINPLCDPKEVCKPGTRPFTQAVVVFDP 331

Query: 130 DDPAQVAWMKRQTPP------TLESKIILVQ-------GSIPEMQKSLDSRVYFDQNGVL 176
            D  Q+  + ++ P             I  +        S   +  + D+ VY      L
Sbjct: 332 LDKKQMELLAKKLPEIKLEPGVQRITYIATEFDKDKGWDSYKSVTDNFDAPVYL-LTPDL 390

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEG 208
             R  ++  P+ ++A  G +F+  E       
Sbjct: 391 ITRFELEHTPSVITAR-GKKFVVRELAEEGGE 421


>UniRef50_Q19NQ8 TrhW n=9 Tax=Enterobacteriaceae RepID=Q19NQ8_ECOK1
          Length = 503

 Score =  147 bits (371), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 20/194 (10%)

Query: 23  TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82
             G ++PV+E  ++  + +R    +  G         K+R + ++ +   +  +   +++
Sbjct: 307 VAGTIYPVEEKSIIKELEERAQKYDWEG--------AKKRAVADTWKNQWMVDLPPAQEH 358

Query: 83  GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQVAWMKRQT 142
              L DP+VR+  D++D +GRV A  GE++NPL   P N T+   +  +P Q+ W ++Q 
Sbjct: 359 KEFLIDPTVRVTQDVKDKQGRVIASAGELINPLSRFPQNLTMIIFDPLNPGQLVWAEQQY 418

Query: 143 PPTLESKIILVQ----------GSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192
              L S  ++              + ++++  + +V F  N  +  R  I   PA ++  
Sbjct: 419 RQRLGSGKVMPMFTRIQKDNGWDHLNDLREKFNGKV-FKVNEQIISRFQIKNTPALIT-T 476

Query: 193 PGDRFLKVEFIPAE 206
             D+F    F  AE
Sbjct: 477 DQDKFRITLFSEAE 490


>UniRef50_Q1NGT0 Hypothetical cytosolic protein n=1 Tax=Sphingomonas sp. SKA58
           RepID=Q1NGT0_9SPHN
          Length = 211

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 18/200 (9%)

Query: 4   RGLIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERV 63
             ++AL      +AA    T G  WP+ EPD +           ++            R 
Sbjct: 18  ALMLALACHEPGLAATS--TIGRTWPIAEPDAMA------EIEARAARAPSLALRLGPRS 69

Query: 64  IRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT 123
             ++L+      +G+T     R   P   +  DIR  +GR+   +G   NPL YV   Q 
Sbjct: 70  TWSALQAAP---LGQTRVDRVRSLVPFYTVEEDIRLPDGRLLYPKGFTFNPLDYVSLPQR 126

Query: 124 LYFINGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGID 183
           L  ++  D   + W  +Q   T    I+L  G   ++ +     + F     + +RLG+ 
Sbjct: 127 LVIVHPRD---LGWALKQARFTD--FILLTAGDALDLSERSGRPL-FILEERVKERLGLT 180

Query: 184 QVPARVSAVPGDRFLKVEFI 203
             P  V+   G + +  E+ 
Sbjct: 181 VAPVIVAQ-QGKKLVLTEYA 199


>UniRef50_A0L2Z3 Putative uncharacterized protein n=1 Tax=Shewanella sp. ANA-3
           RepID=A0L2Z3_SHESA
          Length = 431

 Score =  141 bits (356), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 18/195 (9%)

Query: 16  VAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPG 75
           + +  LG   D + + E DML +I Q+L  ++   +    +  F  R             
Sbjct: 223 LQSGSLGKLSDTYDITEMDMLELIQQKLKKVDWEEKKHEAVSRFVNRKEVQLTE------ 276

Query: 76  IGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQTLYFINGDDPAQV 135
               ++      DP VR   D    +G+ FA+ G+V++P   +     L+ I+     Q+
Sbjct: 277 -SLKDEDVRYKIDPRVRFTQDQTTPDGQYFAKAGDVVDPTALLQMETRLFMIDPTSERQL 335

Query: 136 AWMKRQTPPTLESKII-----LVQGS----IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186
           AWM      T   ++      L  GS       +Q  L  R+Y  Q   +  R  ++ +P
Sbjct: 336 AWMNDVLSVTDHKQVYVLLSALPAGSDLTEFNRLQTKLGRRLYLMQ-PTMVSRFQLEHLP 394

Query: 187 ARVSAVPGDRFLKVE 201
           A V    G+     E
Sbjct: 395 ALVDLFKGE-IRVTE 408


>UniRef50_B9TFF4 Putative uncharacterized protein n=1 Tax=Ricinus communis
           RepID=B9TFF4_RICCO
          Length = 239

 Score =  135 bits (341), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 77/188 (40%), Gaps = 16/188 (8%)

Query: 17  AAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGI 76
            A D G   ++WP+ E D+  ++++    ++ S       ++ ++ +   S R      +
Sbjct: 18  YAKDYGVQANVWPITEIDIRRLLLESAARVDWSKVNSEAQESGRQYLSNLSKR-----QL 72

Query: 77  GRTEKYGSRLFDPSVRLAADI----RDNEG----RVFARQGEVMNPLQYVPFNQTLYFIN 128
              +      FDPS+ L +DI    +  +G    +V   +G  +NPL            +
Sbjct: 73  PTIDHSAVSYFDPSIVLTSDIQAPVKQADGTYQWQVLYPKGTKVNPLDTARPVTAFLMFD 132

Query: 129 GDDPAQVAWMKRQTPPTLESKIILVQGS--IPEMQKSLDSRVYFDQNGVLCQRLGIDQVP 186
           G  P QVA +K+    + +    +  GS  + ++  S    VY   +  +  R  ++ +P
Sbjct: 133 GSQPEQVALVKKVLARSGDRIEAVEAGSGDLSQLGDSFTQTVY-HADDAMIARFQVNYLP 191

Query: 187 ARVSAVPG 194
           + V    G
Sbjct: 192 SLVFPGTG 199


>UniRef50_B7J843 Pilus assembly protein TraW, putative n=1 Tax=Acidithiobacillus
           ferrooxidans ATCC 23270 RepID=B7J843_ACIF2
          Length = 422

 Score =  125 bits (315), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 16/186 (8%)

Query: 23  TWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGRTEKY 82
             G  W V EP+M+++  Q++          + ++  KER   N         +  +   
Sbjct: 234 IHGHTWKVAEPNMISIFEQKIKTFNW----KKTVEQAKERGWENMSTRLG-DALPDSLHG 288

Query: 83  GSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVPFNQT--LYFINGDDPAQVAWMKR 140
            S  ++PS+   A IR   G+V  R+G+ +NPL   PF  T      N     QV   + 
Sbjct: 289 KSYTYNPSIIATATIRMPNGKVLVRKGQEINPLTAFPFPWTQSYIVFNPAQAWQV--AQV 346

Query: 141 QTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGV------LCQRLGIDQVPARVSAVPG 194
           Q   +    ++++   +P+  +  D  V   Q+ V      L  RLGI++VPA +     
Sbjct: 347 QAWESTVPNVVIMASELPKTLQGEDRLVTALQHPVYGFYPHLAHRLGINRVPALI-QPDH 405

Query: 195 DRFLKV 200
           D     
Sbjct: 406 DVLSIT 411


>UniRef50_C0QUV3 Putative uncharacterized protein n=1 Tax=Persephonella marina EX-H1
           RepID=C0QUV3_PERMH
          Length = 203

 Score =  120 bits (300), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 88/213 (41%), Gaps = 21/213 (9%)

Query: 1   MRCRG--LIALLIWGQSVAAADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDA 58
           MR      ++L + G   +  +LGT+G ++              +  ++++ +  +    
Sbjct: 1   MRKIISIFLSLGLIGFGYSLENLGTFGKVYQ-------IEEEDIIEYIKKNAKPPKFSRE 53

Query: 59  FKERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYV 118
           + +R I  + +      +   ++   R       +  DI   EG++ A++G  +N L+ +
Sbjct: 54  YIQRKIHAAAQVD--VNLPVNKRDNVRYEKIIYTVPNDII-IEGKLIAKKGTKINVLKEI 110

Query: 119 PFNQTLYFI-NGDDPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSL-DSRVYFDQNGVL 176
             + T   + +   P  + W K+       +  ++ QG+I ++QK   D R+Y     VL
Sbjct: 111 KLHNTYVILADYMLPYFLDWNKK-----TNAVYLITQGNILDLQKKYPDLRIYAGFPKVL 165

Query: 177 CQRLGIDQVPARVSAVPGDRFLKVEFIPAEEGR 209
              L +  +P+ V     D+ + +E     + +
Sbjct: 166 SS-LKVKSIPSIVYQYQ-DKLVILEKGFPNDKK 196


>UniRef50_D2U0Q6 Conjugative transfer pilus assembly protein TraW n=1
           Tax=Arsenophonus nasoniae RepID=D2U0Q6_9ENTR
          Length = 312

 Score = 83.8 bits (206), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 19  ADLGTWGDLWPVKEPDMLTVIMQRLTALEQSGEMGRKMDAFKERVIRNSLRPPAVPGIGR 78
            DLGT G    + E +ML +I + +  L+         +  K+  I    +   +     
Sbjct: 220 GDLGTQGPAKSIVERNMLDLIKEGIDNLDF--------ERMKKEAIERYWKNKKIYKFPV 271

Query: 79  TEKYGSRLFDPSVRLAADIRDNEGRVFARQG 109
             +      DPSV +  DI    G V A++G
Sbjct: 272 ATENSVHYVDPSVVIPEDIISPNGAVVAKKG 302


>UniRef50_C5LHC5 Dna polymerase i, putative n=2 Tax=Perkinsus marinus ATCC 50983
           RepID=C5LHC5_9ALVE
          Length = 940

 Score = 82.3 bits (202), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 1/92 (1%)

Query: 60  KERVIRNSLRPPAVPGIGRTEKYGSRLFDPSVRLAADIRDNEGRVFARQGEVMNPLQYVP 119
            ER    + R   +  +   +    R  D    +A  ++D  G+    Q E +NP     
Sbjct: 428 IERRGFGANREYLIQQLTAAQADLQRHKDAFRTIAQSLKDRRGQPLNPQAEFINPRSAKQ 487

Query: 120 FNQTLYFINGDDPAQVAWMKRQTPPTLESKII 151
             Q L F N D+P  + W+ R+     E++ I
Sbjct: 488 IRQ-LLFGNPDEPDHLRWVARRVRAGEEAEWI 518


>UniRef50_A5CF18 Conjugative transfer protein n=1 Tax=Orientia tsutsugamushi str.
           Boryong RepID=A5CF18_ORITB
          Length = 50

 Score = 42.2 bits (98), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 152 LVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVSAV 192
           LV G+  E+   L   V+FDQ G L  +  I  + A +   
Sbjct: 2   LVNGNHIELNNLLGRHVFFDQFGFLSMKFKIQDMLAIIKEK 42


>UniRef50_A0NRL0 Putative uncharacterized protein n=1 Tax=Labrenzia aggregata IAM
           12614 RepID=A0NRL0_9RHOB
          Length = 187

 Score = 40.7 bits (94), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 19/127 (14%)

Query: 78  RTEKYGSRLFDPSV----RLAADI---RDNEGRVFARQGEVMNPLQYVPFNQTLYFINGD 130
              +   RL DP +     + ADI   +D   ++ A +G   N  + +   + +      
Sbjct: 64  TAYRAIQRLSDPRIIDLETIRADITLSKDQSAQIVALKGTYNNATESLRLYEGI------ 117

Query: 131 DPAQVAWMKRQTPPTLESKIILVQGSIPEMQKSLDSRVYFDQNGVLCQRLGIDQVPARVS 190
              Q+ W +  T    E +I L  G++             DQ  V+  +L  D+    V 
Sbjct: 118 ---QLEWSEGYTVDLSEVEIDLTNGALKTSNVVSIRS---DQGRVVAGKLDYDKAKGIVR 171

Query: 191 AVPGDRF 197
              G + 
Sbjct: 172 FSDGIKM 178


  Database: uniref50.fasta
    Posted date:  Mar 8, 2010 10:38 AM
  Number of letters in database: 1,040,396,356
  Number of sequences in database:  3,077,464
  
Lambda     K      H
   0.310    0.148    0.406 

Lambda     K      H
   0.267   0.0459    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,307,234,631
Number of Sequences: 3077464
Number of extensions: 54427921
Number of successful extensions: 166074
Number of sequences better than 1.0e-01: 59
Number of HSP's better than  0.1 without gapping: 155
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 165684
Number of HSP's gapped (non-prelim): 179
length of query: 210
length of database: 1,040,396,356
effective HSP length: 123
effective length of query: 87
effective length of database: 661,868,284
effective search space: 57582540708
effective search space used: 57582540708
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 90 (39.1 bits)
