Phyre 2 Results for P18472

Email | l.a.kelley@imperial.ac.uk
Description | P18472
Date | Thu Jan 5 11:37:00 GMT 2012
Unique Job ID | 5279f5cb5050d57d

Detailed template information |

# | Template | Alignment Coverage | 3D Model | Confidence | % i.d. | Template Information
--- | --- | --- | --- | --- | --- | ---
1 | c2fu3A_ |
|  | 72.2 | 20 | PDB header:biosynthetic protein/structural protein Chain: A: PDB Molecule:gephyrin; PDBTitle: crystal structure of gephyrin e-domain
2 | c2bhvC_ |
|  | 60.3 | 21 | PDB header:bacterial protein Chain: C: PDB Molecule:comb10; PDBTitle: structure of comb10 of the com type iv secretion system of2 helicobacter pylori
3 | c3jqoV_ |
|  | 57.7 | 22 | PDB header:transport protein Chain: V: PDB Molecule:traf protein; PDBTitle: crystal structure of the outer membrane complex of a type iv2 secretion system
4 | d2gtta1 |
|  | 57.5 | 29 | Fold:Rhabdovirus nucleoprotein-like Superfamily:Rhabdovirus nucleoprotein-like Family:Rhabdovirus nucleocapsid protein
5 | d2gica1 |
|  | 55.1 | 16 | Fold:Rhabdovirus nucleoprotein-like Superfamily:Rhabdovirus nucleoprotein-like Family:Rhabdovirus nucleocapsid protein
6 | c3emxB_ |
|  | 52.0 | 17 | PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of thioredoxin from aeropyrum pernix
7 | c2nqqA_ |
|  | 51.9 | 19 | PDB header:biosynthetic protein Chain: A: PDB Molecule:molybdopterin biosynthesis protein moea; PDBTitle: moea r137q
8 | c2qsiB_ |
|  | 50.2 | 20 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative hydrogenase expression/formation protein hupg; PDBTitle: crystal structure of putative hydrogenase expression/formation protein2 hupg from rhodopseudomonas palustris cga009
9 | c3e7hA_ |
|  | 47.7 | 13 | PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase subunit beta; PDBTitle: the crystal structure of the beta subunit of the dna-2 directed rna polymerase from vibrio cholerae o1 biovar3 eltor
10 | d1j08a2 |
|  | 47.2 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
11 | d2hfda1 |
|  | 43.9 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:HyaE-like
12 | c2yjpB_ |
|  | 41.7 | 14 | PDB header:transport protein Chain: B: PDB Molecule:putative abc transporter, periplasmic binding protein, PDBTitle: crystal structure of the solute receptors for l-cysteine of2 neisseria gonorrhoeae
13 | d1v58a1 |
|  | 40.8 | 18 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like
14 | d1woua_ |
|  | 36.7 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like
15 | d1v9wa_ |
|  | 36.3 | 27 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Txnl5-like
16 | d1hyua4 |
|  | 36.0 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
17 | d1nhoa_ |
|  | 35.6 | 21 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
18 | d1syra_ |
|  | 35.3 | 10 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
19 | d1zmaa1 |
|  | 34.1 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
20 | c2fgxA_ |
|  | 33.7 | 19 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: solution nmr structure of protein ne2328 from nitrosomonas2 europaea. northeast structural genomics consortium target3 net3.
21 | c2vm2C_ |
| not modelled | 33.2 | 11 | PDB header:oxidoreductase Chain: C: PDB Molecule:thioredoxin h isoform 1.; PDBTitle: crystal structure of barley thioredoxin h isoform 12 crystallized using peg as precipitant
22 | d1j08a1 |
| not modelled | 31.6 | 23 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
23 | d2nqra2 |
| not modelled | 31.4 | 18 | Fold:MoeA N-terminal region -like Superfamily:MoeA N-terminal region -like Family:MoeA N-terminal region -like
24 | c2l6dA_ |
| not modelled | 30.3 | 23 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of desulfothioredoxin from desulfovibrio vulgaris2 hildenborough in its reduced form
25 | c2dizA_ |
| not modelled | 29.8 | 11 | PDB header:electron transport Chain: A: PDB Molecule:thioredoxin domain-containing protein 5; PDBTitle: the solution structure of the third thioredoxin domain of2 human thioredoxin domain-containing protein 5
26 | d1a8la1 |
| not modelled | 29.8 | 28 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
27 | d1fo5a_ |
| not modelled | 29.8 | 32 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
28 | d1uz5a2 |
| not modelled | 29.4 | 29 | Fold:MoeA N-terminal region -like Superfamily:MoeA N-terminal region -like Family:MoeA N-terminal region -like
29 | c3nvbA_ |
| not modelled | 29.0 | 11 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of n-terminal part of the protein bf1531 from2 bacteroides fragilis containing phosphatase domain complexed with mg3 and tungstate
30 | d1h6ua1 |
| not modelled | 28.9 | 9 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain
31 | c3dmlA_ |
| not modelled | 28.4 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of the periplasmic thioredoxin soxs from2 paracoccus pantotrophus (reduced form)
32 | c2pptA_ |
| not modelled | 28.1 | 12 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin-2; PDBTitle: crystal structure of thioredoxin-2
33 | d1h6ta1 |
| not modelled | 28.0 | 5 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain
34 | c1v57A_ |
| not modelled | 27.6 | 18 | PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbg; PDBTitle: crystal structure of the disulfide bond isomerase dsbg
35 | c3gnjD_ |
| not modelled | 26.9 | 23 | PDB header:structural genomics, unknown function Chain: D: PDB Molecule:thioredoxin domain protein; PDBTitle: the crystal structure of a thioredoxin-related protein from2 desulfitobacterium hafniense dcb
36 | c3cxgA_ |
| not modelled | 26.6 | 20 | PDB header:oxidoreductase Chain: A: PDB Molecule:putative thioredoxin; PDBTitle: crystal structure of plasmodium falciparum thioredoxin, pfi0790w
37 | d1gh2a_ |
| not modelled | 26.2 | 13 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
38 | d1qgva_ |
| not modelled | 25.7 | 0 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:spliceosomal protein U5-15Kd
39 | d1spgb_ |
| not modelled | 25.5 | 8 | Fold:Globin-like Superfamily:Globin-like Family:Globins
40 | c2y7iB_ |
| not modelled | 25.3 | 19 | PDB header:arginine-binding protein Chain: B: PDB Molecule:stm4351; PDBTitle: structural basis for high arginine specificity in salmonella2 typhimurium periplasmic binding protein stm4351.
41 | d1wu2a2 |
| not modelled | 25.2 | 33 | Fold:MoeA N-terminal region -like Superfamily:MoeA N-terminal region -like Family:MoeA N-terminal region -like
42 | c2l5lA_ |
| not modelled | 24.4 | 14 | PDB header:transport protein Chain: A: PDB Molecule:thioredoxin; PDBTitle: solution structure of thioredoxin from bacteroides vulgatus
43 | c2f51B_ |
| not modelled | 23.9 | 18 | PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: structure of trichomonas vaginalis thioredoxin
44 | c3d6iB_ |
| not modelled | 23.5 | 19 | PDB header:oxidoreductase Chain: B: PDB Molecule:monothiol glutaredoxin-3; PDBTitle: structure of the thioredoxin-like domain of yeast2 glutaredoxin 3
45 | d1a8la2 |
| not modelled | 23.5 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
46 | c2dmlA_ |
| not modelled | 23.1 | 21 | PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a6; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a6
47 | c3gv1A_ |
| not modelled | 22.3 | 21 | PDB header:structural genomics, unknown function Chain: A: PDB Molecule:disulfide interchange protein; PDBTitle: crystal structure of disulfide interchange protein from neisseria2 gonorrhoeae
48 | d1wdna_ |
| not modelled | 22.1 | 11 | Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like
49 | d2omza1 |
| not modelled | 21.7 | 14 | Fold:Immunoglobulin-like beta-sandwich Superfamily:E set domains Family:Internalin Ig-like domain
50 | c1j08A_ |
| not modelled | 21.4 | 19 | PDB header:isomerase Chain: A: PDB Molecule:glutaredoxin-like protein; PDBTitle: crystal structure of glutaredoxin-like protein from2 pyrococcus horikoshii
51 | c2i9hA_ |
| not modelled | 20.7 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin i; PDBTitle: nmr solution structure of the reduced form of thioredoxin 12 from yeast (trx1)
52 | d2b5ea4 |
| not modelled | 20.7 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:PDI-like
53 | c3kzqE_ |
| not modelled | 20.5 | 21 | PDB header:structural genomics, unknown function Chain: E: PDB Molecule:putative uncharacterized protein vp2116; PDBTitle: the crystal structure of the protein with unknown function from vibrio2 parahaemolyticus rimd 2210633
54 | c2pyyB_ |
| not modelled | 20.1 | 21 | PDB header:transport protein Chain: B: PDB Molecule:ionotropic glutamate receptor bacterial homologue; PDBTitle: crystal structure of the glur0 ligand-binding core from nostoc2 punctiforme in complex with (l)-glutamate
55 | c1zypB_ |
| not modelled | 20.0 | 16 | PDB header:oxidoreductase Chain: B: PDB Molecule:alkyl hydroperoxide reductase subunit f; PDBTitle: synchrotron reduced form of the n-terminal domain of2 salmonella typhimurium ahpf
56 | c1wu2B_ |
| not modelled | 19.3 | 29 | PDB header:structural genomics,biosynthetic protein Chain: B: PDB Molecule:molybdopterin biosynthesis moea protein; PDBTitle: crystal structure of molybdopterin biosynthesis moea2 protein from pyrococcus horikoshii ot3
57 | c1w89E_ |
| not modelled | 19.0 | 24 | PDB header:electron transport Chain: E: PDB Molecule:thioredoxin; PDBTitle: structure of the reduced form of human thioredoxin 2
58 | c3h7mA_ |
| not modelled | 18.9 | 15 | PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of a histidine kinase sensor domain with2 similarity to periplasmic binding proteins
59 | c1yvyA_ |
| not modelled | 18.7 | 18 | PDB header:lyase Chain: A: PDB Molecule:phosphoenolpyruvate carboxykinase [atp]; PDBTitle: crystal strucutre of anaerobiospirillum succiniciproducens2 phosphoenolpyruvate carboxykinase
60 | d1thxa_ |
| not modelled | 18.5 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
61 | d1dbya_ |
| not modelled | 18.4 | 14 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
62 | c1zu4A_ |
| not modelled | 18.3 | 16 | PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212
63 | c3delC_ |
| not modelled | 18.2 | 11 | PDB header:protein binding, transport protein Chain: C: PDB Molecule:arginine binding protein; PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis
64 | c3kzgB_ |
| not modelled | 18.2 | 14 | PDB header:transport protein Chain: B: PDB Molecule:arginine 3rd transport system periplasmic binding PDBTitle: crystal structure of an arginine 3rd transport system2 periplasmic binding protein from legionella pneumophila
65 | d2ftsa2 |
| not modelled | 18.1 | 27 | Fold:MoeA N-terminal region -like Superfamily:MoeA N-terminal region -like Family:MoeA N-terminal region -like
66 | c2vhaB_ |
| not modelled | 17.9 | 18 | PDB header:transport protein Chain: B: PDB Molecule:periplasmic binding transport protein; PDBTitle: debp
67 | d1l1fa2 |
| not modelled | 17.8 | 12 | Fold:Aminoacid dehydrogenase-like, N-terminal domain Superfamily:Aminoacid dehydrogenase-like, N-terminal domain Family:Aminoacid dehydrogenases
68 | d1eeja1 |
| not modelled | 17.7 | 32 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like
69 | d1r89a1 |
| not modelled | 17.6 | 12 | Fold:PAP/OAS1 substrate-binding domain Superfamily:PAP/OAS1 substrate-binding domain Family:Archaeal tRNA CCA-adding enzyme substrate-binding domain
70 | d1lsta_ |
| not modelled | 17.5 | 18 | Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like
71 | c2vimA_ |
| not modelled | 17.3 | 18 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin; PDBTitle: x-ray structure of fasciola hepatica thioredoxin
72 | d1hsla_ |
| not modelled | 17.2 | 6 | Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like
73 | c3apsA_ |
| not modelled | 17.2 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:dnaj homolog subfamily c member 10; PDBTitle: crystal structure of trx4 domain of erdj5
74 | c2ieeB_ |
| not modelled | 17.2 | 11 | PDB header:structural genomics, unknown function Chain: B: PDB Molecule:probable abc transporter extracellular-binding PDBTitle: crystal structure of yckb_bacsu from bacillus subtilis.2 northeast structural genomics consortium target sr574.
75 | c3tcoA_ |
| not modelled | 17.1 | 16 | PDB header:oxidoreductase Chain: A: PDB Molecule:thioredoxin (trxa-1); PDBTitle: crystallographic and spectroscopic characterization of sulfolobus2 solfataricus trxa1 provide insights into the determinants of3 thioredoxin fold stability
76 | d2bv3a4 |
| not modelled | 16.6 | 16 | Fold:Ferredoxin-like Superfamily:EF-G C-terminal domain-like Family:EF-G/eEF-2 domains III and V
77 | d2es7a1 |
| not modelled | 16.6 | 21 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:HyaE-like
78 | d1m7ta_ |
| not modelled | 16.6 | 16 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
79 | c1jzdA_ |
| not modelled | 16.5 | 27 | PDB header:oxidoreductase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: dsbc-dsbdalpha complex
80 | c2oe0B_ |
| not modelled | 16.5 | 16 | PDB header:electron transport Chain: B: PDB Molecule:thioredoxin-3; PDBTitle: crystal structure of mitochondrial thioredoxin 3 from2 saccharomyces cerevisiae
81 | c3kbrA_ |
| not modelled | 16.4 | 22 | PDB header:lyase Chain: A: PDB Molecule:cyclohexadienyl dehydratase; PDBTitle: the crystal structure of cyclohexadienyl dehydratase precursor from2 pseudomonas aeruginosa pa01
82 | d2f34a1 |
| not modelled | 16.3 | 12 | Fold:Periplasmic binding protein-like II Superfamily:Periplasmic binding protein-like II Family:Phosphate binding protein-like
83 | c1t3bA_ |
| not modelled | 15.8 | 19 | PDB header:isomerase Chain: A: PDB Molecule:thiol:disulfide interchange protein dsbc; PDBTitle: x-ray structure of dsbc from haemophilus influenzae
84 | d2cvba1 |
| not modelled | 15.7 | 5 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Glutathione peroxidase-like
85 | c2ylnA_ |
| not modelled | 15.7 | 11 | PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter, periplasmic binding protein, PDBTitle: crystal structure of the l-cystine solute receptor of2 neisseria gonorrhoeae in the closed conformation
86 | d1xwaa_ |
| not modelled | 15.7 | 18 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
87 | d1ep7a_ |
| not modelled | 15.6 | 11 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
88 | c1xbsA_ |
| not modelled | 15.6 | 21 | PDB header:transcription, cell cycle Chain: A: PDB Molecule:dim1-like protein; PDBTitle: crystal structure of human dim2: a dim1-like protein
89 | d1ti3a_ |
| not modelled | 15.5 | 10 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:Thioltransferase
90 | d1t3ba1 |
| not modelled | 15.4 | 19 | Fold:Thioredoxin fold Superfamily:Thioredoxin-like Family:DsbC/DsbG C-terminal domain-like
91 | c2xbqB_ |
| not modelled | 15.3 | 18 | PDB header:oxidoreductase Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of reduced schistosoma mansoni2 thioredoxin pre-protein at 1.7 angstrom
92 | c3hypB_ |
| not modelled | 15.3 | 18 | PDB header:electron transport Chain: B: PDB Molecule:thioredoxin; PDBTitle: crystal structure of bacteroides fragilis trxp_s105g mutant
93 | c3g41A_ |
| not modelled | 15.1 | 22 | PDB header:transport protein Chain: A: PDB Molecule:amino acid abc transporter, periplasmic amino acid-binding PDBTitle: the structure of cpn0482, the arginine binding protein from the2 periplasm of chlamydia pneumoniae
94 | c3kp8A_ |
| not modelled | 15.1 | 21 | PDB header:oxidoreductase Chain: A: PDB Molecule:vkorc1/thioredoxin domain protein; PDBTitle: the thioredoxin-like domain of a vkor homolog from2 synechococcus sp.
95 | c3g9bA_ |
| not modelled | 15.0 | 24 | PDB header:transferase Chain: A: PDB Molecule:dolichyl-diphosphooligosaccharide-protein PDBTitle: crystal structure of reduced ost6l
96 | c2dj1A_ |
| not modelled | 15.0 | 11 | PDB header:isomerase Chain: A: PDB Molecule:protein disulfide-isomerase a4; PDBTitle: the solution structure of the first thioredoxin domain of2 mouse protein disulfide-isomerase a4
97 | c1t00A_ |
| not modelled | 14.8 | 11 | PDB header:electron transport Chain: A: PDB Molecule:thioredoxin; PDBTitle: the structure of thioredoxin from s. coelicolor
98 | d1dd9a_ |
| not modelled | 14.7 | 22 | Fold:DNA primase core Superfamily:DNA primase core Family:DNA primase DnaG catalytic core
99 | c1dd9A_ |
| not modelled | 14.7 | 22 | PDB header:transferase Chain: A: PDB Molecule:dna primase; PDBTitle: structure of the dnag catalytic core